BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6276
(271 letters)
Database: nr
31,244,244 sequences; 10,788,889,170 total letters
Searching..................................................done
>gi|91084271|ref|XP_971155.1| PREDICTED: similar to Csl4 CG6249-PA [Tribolium castaneum]
gi|270008798|gb|EFA05246.1| hypothetical protein TcasGA2_TC015397 [Tribolium castaneum]
Length = 196
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 119/166 (71%), Gaps = 5/166 (3%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
MS+P +C+PGQR+C D V G+GTY R GY+Y+TLAG V I +DN V +IEV S
Sbjct: 1 MSSPLVCLPGQRLCLSDPSHVSGQGTYERGGYIYATLAGVVDIVP--KDN--VQIIEVRS 56
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE 120
+E +VP+ GD+VTA+I + Q CK ++ VG+ L R +R +LR+E+VRATE DR+E
Sbjct: 57 SGQETLVPSQGDIVTAQIHTITQQFCKCYIKCVGDKVLGRQYRGILRKEDVRATEKDRVE 116
Query: 121 MYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
+YK +RPGD+ILAR LP+ E H+YQLSTAENELGVV A SE L
Sbjct: 117 IYKSFRPGDVILARVLPITEAHTYQLSTAENELGVVTAHSEHGGLM 162
>gi|322789867|gb|EFZ15014.1| hypothetical protein SINV_14459 [Solenopsis invicta]
Length = 217
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 113/161 (70%), Gaps = 5/161 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
IC+PGQR+C D V G GTY +QGY+YS LAG V + N ++ +EV S ++
Sbjct: 22 ICVPGQRLCVSDKSNVAGPGTYEQQGYIYSKLAGIVKLVT----NDKIRKVEVHSMTEQS 77
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
VP PGD+VTA + V Q CK + VG+ L+R +R +LR+E+VRA + D+IEMYKCY
Sbjct: 78 TVPAPGDIVTAMVTVVNQRFCKCSIKCVGDIVLTRPYRGILRKEDVRAIDKDKIEMYKCY 137
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
RPGDIILAR +P+ E+H+YQLSTAENELGVVIA S+ ++
Sbjct: 138 RPGDIILARVMPMTEMHTYQLSTAENELGVVIAHSDEGAVM 178
>gi|332018459|gb|EGI59049.1| 3'-5' exoribonuclease CSL4-like protein [Acromyrmex echinatior]
Length = 200
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 114/156 (73%), Gaps = 5/156 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
IC+PGQR+C D V G GTY +QGY+YS LAG V K V D+K +V EV S ++
Sbjct: 9 ICVPGQRLCVADKSNVAGAGTYEQQGYIYSKLAGIV---KLVTDDKTRTV-EVHSITEQS 64
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
IVP PGD+VTA + V Q CK + VG+ L+R +R +LR+E+VRA + D++EMYKCY
Sbjct: 65 IVPAPGDIVTAIVTVVNQRFCKCSIKCVGDIILTRPYRGILRKEDVRAIDKDKLEMYKCY 124
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
RPGDIILAR +P+ E+H+YQLSTAENELGVVIA S+
Sbjct: 125 RPGDIILARVMPMTEIHTYQLSTAENELGVVIAHSD 160
>gi|156538385|ref|XP_001605472.1| PREDICTED: exosome complex component CSL4-like [Nasonia
vitripennis]
Length = 198
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 88/159 (55%), Positives = 109/159 (68%), Gaps = 5/159 (3%)
Query: 3 NPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYK 62
+P ICIPGQR+C D + G+GTY + GY+YS AG V + K N +EV
Sbjct: 5 DPIICIPGQRLCPADKTNIAGQGTYEQLGYIYSKFAGIVKVIK----NDNTCTVEVHGMT 60
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
+ IVP PGD+VTA + V Q CK + +G+ LSR +R ++RRE+VRATE DRIEMY
Sbjct: 61 DQSIVPAPGDIVTAMVTIVNQRFCKCTIKCIGDIVLSRPYRGIVRREDVRATEKDRIEMY 120
Query: 123 KCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
K +RPGDIILAR LP+ E H+YQLSTAENELGVVIA SE
Sbjct: 121 KSFRPGDIILARVLPMTEAHTYQLSTAENELGVVIAHSE 159
>gi|240848929|ref|NP_001155702.1| exosomal core protein Csl4 [Acyrthosiphon pisum]
gi|239799438|dbj|BAH70639.1| ACYPI007328 [Acyrthosiphon pisum]
Length = 195
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 119/161 (73%), Gaps = 5/161 (3%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
M N +C+PGQR+C+LDS G+GTY RQ Y+YS+LAG V+++ N ++SV+EV S
Sbjct: 1 MENRIVCVPGQRLCRLDSTHTLGKGTYKRQDYIYSSLAGIVNVDN---TNNKISVVEVLS 57
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE 120
K + IVP PGD+VTA + + Q +CK + SV L+ T+R+ LRR++VR EID+I+
Sbjct: 58 -KDQTIVPAPGDIVTAMVTTLNQDMCKCLITSVCGHELNETYRSSLRRQDVRMKEIDKID 116
Query: 121 MYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
M +C+RPGDIILAR LP+ E H+++L+TAENELGVVIA SE
Sbjct: 117 MLQCFRPGDIILARILPMTEAHTFKLTTAENELGVVIACSE 157
>gi|307203861|gb|EFN82797.1| 3'-5' exoribonuclease CSL4-like protein [Harpegnathos saltator]
Length = 197
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 111/156 (71%), Gaps = 5/156 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
IC+PGQR+C D + G GTY +QGY+YS LAG V + E N + +I+V ++
Sbjct: 9 ICVPGQRLCVCDKINIAGPGTYEQQGYIYSKLAGIVKL----ETNDKTRIIQVHGITEQS 64
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
I+PTPGD+VTA ++ V Q CK + VG+ L+R +R +LR+E+VRA + D+I+MYK Y
Sbjct: 65 IIPTPGDIVTAMVILVNQRFCKCSIKCVGDIVLTRPYRGILRKEDVRAHDKDKIDMYKSY 124
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
R GDIILAR +P+ E H+YQLSTAENELGVVIA SE
Sbjct: 125 RAGDIILARVMPMTEAHTYQLSTAENELGVVIAHSE 160
>gi|170033758|ref|XP_001844743.1| exosomal 3'-5' exoribonuclease complex subunit ski4 [Culex
quinquefasciatus]
gi|167874820|gb|EDS38203.1| exosomal 3'-5' exoribonuclease complex subunit ski4 [Culex
quinquefasciatus]
Length = 213
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 112/155 (72%), Gaps = 5/155 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
IC+PGQR+C + VGG GTY + GYL+++L+G V I K ++N I V+S+ +
Sbjct: 17 ICVPGQRLCAVTEYTVGGEGTYEKLGYLHASLSGVVRIRKRKKNNH----ISVASFGSKT 72
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+VP GDVVTA+I + Q K +I +G T L+R +R +LR+E+VRATE DR+EMYKC+
Sbjct: 73 VVPVMGDVVTAKITVINQRFAKCVIICIGKTCLNRPYRGILRKEDVRATEKDRVEMYKCF 132
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
RPGD+ILAR LP EL++Y L+TAENELGV +ALS
Sbjct: 133 RPGDVILARVLPQIELNTYHLTTAENELGVAVALS 167
>gi|499003164|ref|XP_004535019.1| PREDICTED: exosome complex component CSL4-like [Ceratitis capitata]
Length = 216
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 109/155 (70%), Gaps = 5/155 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+C+PGQRIC + V G+GTY R GY+Y+TLAGTV V++ + IEV +
Sbjct: 19 LCLPGQRICLSEETTVTGQGTYERGGYIYATLAGTV----QVKEKDKCKYIEVKCAGSQT 74
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
IVP GDV+TAR++ V Q K +I +G+ L RT+R ++R+E+VRATE DR+EMYK +
Sbjct: 75 IVPVAGDVITARVLQVNQRFAKCSIICIGDHILERTYRGIVRKEDVRATEKDRVEMYKSF 134
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
RPGD+ILAR LP EL YQLSTAENELGVV+A S
Sbjct: 135 RPGDVILARVLPQTELSCYQLSTAENELGVVVATS 169
>gi|478254874|gb|ENN75110.1| hypothetical protein YQE_08423, partial [Dendroctonus ponderosae]
Length = 231
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 111/157 (70%), Gaps = 5/157 (3%)
Query: 5 PICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKE 64
PIC+PGQR+ D+ G+GTY RQGY+YS LAGTV + D V VIEV S ++
Sbjct: 36 PICLPGQRLSICDNVYTCGQGTYQRQGYIYSMLAGTVDL----VDRNGVKVIEVHSTGEQ 91
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
++PT GD+VTA++ + Q K ++ +G+T L +R L+RREN+RATE D+ E++K
Sbjct: 92 TVIPTQGDIVTAQVYIITQQFAKCYIKCIGSTVLRSPYRGLIRRENIRATEKDKTEVFKS 151
Query: 125 YRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
RPGDI+LAR LP+ E HSYQLSTAENELGVVIA SE
Sbjct: 152 LRPGDIVLARVLPMTEAHSYQLSTAENELGVVIAHSE 188
>gi|242013917|ref|XP_002427645.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512075|gb|EEB14907.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 208
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 111/162 (68%), Gaps = 10/162 (6%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+CIPGQR+ + + V G GT R G++ STLAG V I K ++ S++ V +Y ++
Sbjct: 8 VCIPGQRLTYANQEYVSGPGTIERDGFIRSTLAGFVQIEKQQKN----SIVTVKNYNQQT 63
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+VPTPGD+VTA+IM V LCK + VG L+R +R LLR+E++RATE D+IE+YKC+
Sbjct: 64 VVPTPGDIVTAKIMTVSHWLCKCEIKGVGEVILTRPYRGLLRKEDIRATEKDKIEVYKCF 123
Query: 126 RPGDIILAR------LPLKELHSYQLSTAENELGVVIALSEA 161
RPGDIILAR + +K+ H Y LSTAENELGVV A EA
Sbjct: 124 RPGDIILARKFIILTIVIKKSHWYMLSTAENELGVVSAYGEA 165
>gi|380024377|ref|XP_003695976.1| PREDICTED: exosome complex component CSL4-like [Apis florea]
Length = 197
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 109/156 (69%), Gaps = 5/156 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+C+PGQR+C D + G GTY +QGY+YS LAG V K VE + IEV ++
Sbjct: 9 VCVPGQRLCISDKVNIAGPGTYEQQGYIYSKLAGLV---KLVE-KENTRTIEVHGITEQS 64
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
IVP PGD+VTA + V Q CK + +G+ L+R +R +LR+E+VRA + D I+MYKC+
Sbjct: 65 IVPAPGDIVTAMVTIVNQRFCKCSIKCIGDIVLTRPYRGILRKEDVRAIDKDNIQMYKCF 124
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
RPGDIILAR +P+ E H+YQLSTAENELGVVIA SE
Sbjct: 125 RPGDIILARVMPMTEGHTYQLSTAENELGVVIAHSE 160
>gi|350424034|ref|XP_003493668.1| PREDICTED: exosome complex component CSL4-like [Bombus impatiens]
Length = 198
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 107/156 (68%), Gaps = 5/156 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+C+PGQR+C D + G GTY +QGY+YS L G V + + + IEV ++
Sbjct: 9 VCVPGQRLCISDKFNIAGPGTYEQQGYIYSKLVGVVKLIQ----KENTRTIEVHGITEQS 64
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
IVP PGD+VTA + V Q CK + +G+ L+R +R +LR+E+VRA + D I+MYKC+
Sbjct: 65 IVPAPGDIVTAMVTIVNQRFCKCSIKCIGDIVLTRPYRGILRKEDVRAIDKDNIQMYKCF 124
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
RPGDIILAR +P+ E H+YQLSTAENELGVVIA SE
Sbjct: 125 RPGDIILARVMPMTEAHTYQLSTAENELGVVIAHSE 160
>gi|66525811|ref|XP_624453.1| PREDICTED: 3'-5' exoribonuclease CSL4 homolog [Apis mellifera]
Length = 198
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 108/156 (69%), Gaps = 5/156 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+C+PGQR+C D + G GTY +QGY+YS LAG V + + + +EV ++
Sbjct: 9 VCVPGQRLCISDKVNIAGPGTYEQQGYIYSKLAGLVKL----VEKENTRTVEVHGITEQS 64
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
IVP PGD+VTA + V Q CK + +G+ L+R +R +LR+E+VRA + D I+MYKC+
Sbjct: 65 IVPAPGDIVTAMVTIVNQRFCKCSIKCIGDIVLTRPYRGILRKEDVRAIDKDNIQMYKCF 124
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
RPGDIILAR +P+ E H+YQLSTAENELGVVIA SE
Sbjct: 125 RPGDIILARVMPMTEGHTYQLSTAENELGVVIAHSE 160
>gi|340726414|ref|XP_003401553.1| PREDICTED: exosome complex component CSL4-like [Bombus terrestris]
Length = 198
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 107/156 (68%), Gaps = 5/156 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+C+PGQR+C D + G GTY +QGY+YS L G V + + + + IEV ++
Sbjct: 9 VCVPGQRLCVSDKFNIAGPGTYEQQGYIYSKLVGVVKLIQ----KENIRTIEVHGITEQS 64
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
IVP PGD+VTA + V Q CK + +G+ L+R +R +LR+E+VR + D I+MYKC+
Sbjct: 65 IVPAPGDIVTAMVTIVNQRFCKCSIKCIGDIVLTRPYRGILRKEDVRVIDKDNIQMYKCF 124
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
RPGDIILAR +P+ E H+YQLSTAENELGVVIA SE
Sbjct: 125 RPGDIILARVMPMTEAHTYQLSTAENELGVVIAHSE 160
>gi|321467474|gb|EFX78464.1| hypothetical protein DAPPUDRAFT_305166 [Daphnia pulex]
Length = 205
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/159 (53%), Positives = 110/159 (69%), Gaps = 4/159 (2%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
IC PGQRIC D+ +GG GTY RQGY+ S LAG V + + +K + +IEV S K++
Sbjct: 11 ICTPGQRICLSDNQYIGGAGTYTRQGYITSCLAGVVKVTS--QHDKRI-LIEVRSGKEQT 67
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+VP+ GDVVTAR+ + + ++ V + L+ FR LR+E+VRATE DR+EMYKC+
Sbjct: 68 VVPSAGDVVTARVTQINPRWARCAILCVKDIVLAEPFRGQLRKEDVRATEKDRVEMYKCF 127
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
RP DIILAR L L + HSY LSTAENELGVVIA SE +
Sbjct: 128 RPNDIILARVLSLGDAHSYVLSTAENELGVVIAYSEEGT 166
>gi|307187351|gb|EFN72479.1| 3'-5' exoribonuclease CSL4-like protein [Camponotus floridanus]
Length = 233
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 106/151 (70%), Gaps = 4/151 (2%)
Query: 11 QRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTP 70
QR+C D + G GTY +QGY+YS LAG V K + + K+ IEV ++ IVP P
Sbjct: 45 QRLCVSDKVNIAGPGTYEQQGYIYSKLAGIV---KLITNEKQTRTIEVQGITEQSIVPAP 101
Query: 71 GDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDI 130
GD+VTA + V Q CK + VG+ L+R +R +LR+E+VRA + DR+EMYKCYRPGDI
Sbjct: 102 GDIVTAIVTLVNQRFCKCSIKCVGDIVLTRPYRGILRKEDVRAIDKDRLEMYKCYRPGDI 161
Query: 131 ILAR-LPLKELHSYQLSTAENELGVVIALSE 160
ILAR +P+ E H+YQLSTAENELGVVIA SE
Sbjct: 162 ILARVMPMTEAHTYQLSTAENELGVVIAHSE 192
>gi|332375869|gb|AEE63075.1| unknown [Dendroctonus ponderosae]
Length = 199
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 110/157 (70%), Gaps = 5/157 (3%)
Query: 5 PICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKE 64
PIC+PGQR+ D+ G+GTY RQGY+YS LAGTV + D V VIEV S ++
Sbjct: 4 PICLPGQRLSICDNVYTCGQGTYQRQGYIYSMLAGTVDL----VDRNGVKVIEVHSTGEQ 59
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
++ T GD+VTA++ + Q K ++ +G+T L +R L+RREN+RATE D+ E++K
Sbjct: 60 TVISTQGDIVTAQVYIITQQFAKCYIKCIGSTVLRSPYRGLIRRENIRATEKDKTEVFKS 119
Query: 125 YRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
RPGDI+LAR LP+ E HSYQLSTAENELGVVIA SE
Sbjct: 120 LRPGDIVLARVLPMTEAHSYQLSTAENELGVVIAHSE 156
>gi|383851800|ref|XP_003701419.1| PREDICTED: exosome complex component CSL4-like [Megachile
rotundata]
Length = 212
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 108/156 (69%), Gaps = 5/156 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+C+PGQR+C D + G GTY +QGY+YS LAG V + + E+N IEV ++
Sbjct: 23 VCVPGQRLCVSDKVNIAGTGTYEQQGYIYSKLAGVVKLVQ--EENTRT--IEVHGITEQS 78
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
IVP PGD+VTA + V Q CK + +G+ L+R +R +LR+E+VRA + I+MYK +
Sbjct: 79 IVPAPGDIVTAMVTVVNQRFCKCSIKCIGDIVLTRPYRGILRKEDVRALDKSNIQMYKSF 138
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
RPGDIILAR +P+ E H+YQLSTAENELGVVIA SE
Sbjct: 139 RPGDIILARVMPMTEAHTYQLSTAENELGVVIAHSE 174
>gi|158297117|ref|XP_317396.3| AGAP008063-PA [Anopheles gambiae str. PEST]
gi|157015041|gb|EAA12694.3| AGAP008063-PA [Anopheles gambiae str. PEST]
Length = 214
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 113/158 (71%), Gaps = 5/158 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
IC+PGQ +C V G+GTY + GY+++TLAG V + K E N +SV+ S+
Sbjct: 14 ICVPGQILCAASEFTVAGQGTYEKLGYIHATLAGIVQMKKR-EKNTFISVV---SFGGGA 69
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
VP GD+VTARI AVQ + + ++ +G TAL+RT R ++R+E+VRATE+DR+EM+KC+
Sbjct: 70 TVPVIGDIVTARITAVQNRMARCRILCIGKTALNRTLRGIIRKEDVRATEVDRVEMHKCF 129
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
RPGDIILAR L EL+ + LSTA+NELGVV+A+S ++
Sbjct: 130 RPGDIILARVLHQIELNVFHLSTADNELGVVVAISPSS 167
>gi|94469354|gb|ABF18526.1| exosomal 3'-5' exoribonuclease complex subunit ski4 [Aedes aegypti]
Length = 211
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 115/159 (72%), Gaps = 5/159 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
IC+PGQR+C + VGG GTY + GYL+++L+G V I K ++N I V+S+ +
Sbjct: 15 ICVPGQRLCAISEYTVGGEGTYEKLGYLHASLSGVVKIRKRHKNN----YISVASFGSKT 70
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+VP GDVVTA+I + Q K +I +G T L+R +R +LR+E+VRATE DR+EMYKC+
Sbjct: 71 VVPVVGDVVTAKITVINQRFAKCVIICIGKTCLNRPYRGILRKEDVRATEKDRVEMYKCF 130
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
RPGDIILAR LPL EL++Y L+TAENELGV +A+S +S
Sbjct: 131 RPGDIILARVLPLVELNTYHLTTAENELGVAVAMSNKSS 169
>gi|157120762|ref|XP_001659760.1| hypothetical protein AaeL_AAEL001619 [Aedes aegypti]
gi|108883049|gb|EAT47274.1| AAEL001619-PA [Aedes aegypti]
Length = 211
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 115/159 (72%), Gaps = 5/159 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
IC+PGQR+C + VGG GTY + GYL+++L+G V I K ++N I V+S+ +
Sbjct: 15 ICVPGQRLCAISEYTVGGEGTYEKLGYLHASLSGVVKIRKRHKNN----YISVASFGSKT 70
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+VP GDVVTA+I + Q K +I +G T L+R +R +LR+E+VRATE DR+EMYKC+
Sbjct: 71 VVPVVGDVVTAKITVINQRFAKCVIICIGKTCLNRPYRGILRKEDVRATEKDRVEMYKCF 130
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
RPGD+ILAR LPL EL++Y L+TAENELGV +A+S +S
Sbjct: 131 RPGDVILARVLPLVELNTYHLTTAENELGVAVAMSNKSS 169
>gi|312380167|gb|EFR26245.1| hypothetical protein AND_07831 [Anopheles darlingi]
Length = 214
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 109/158 (68%), Gaps = 5/158 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
IC+PGQ +C + V GTY + GY+++ LAG V + K E N +SVI S+
Sbjct: 11 ICVPGQVLCAISEFTVASEGTYEKLGYIHAALAGIVKLKKR-EKNTFISVI---SFGGGS 66
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
VP GD+VT RI AV + K ++ +G TAL+R +R ++R+E+VRATEIDR+E++KC+
Sbjct: 67 TVPVIGDIVTTRITAVHHRMAKCRILCIGKTALNRPYRGIIRKEDVRATEIDRVELHKCF 126
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
RPGDI+LAR L EL+ + LSTA+NELGVV+A+S ++
Sbjct: 127 RPGDIVLARVLHQIELNVFHLSTADNELGVVVAISPSS 164
>gi|512934499|ref|XP_004933048.1| PREDICTED: exosome complex component CSL4-like [Bombyx mori]
Length = 221
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 109/158 (68%), Gaps = 3/158 (1%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
ICIPG R+ + D V G GTY +GY+Y+ LAG + + ++N + ++I V S +
Sbjct: 13 ICIPGMRLSLSNKDNVSGPGTYELKGYIYAALAGILKTEE--DENTKANIISVESSRTPS 70
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
++P GD+VTA++ V + ++ VG + L R ++ +L++E+++ATE DR++ YKC+
Sbjct: 71 VLPNTGDIVTAKVTVVNPRTVQCLILCVGPSVLVRMYKGILKKEDIKATEKDRVDPYKCF 130
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
RPGDIILAR LP+ E+H YQLSTAENELGVVIA +E +
Sbjct: 131 RPGDIILARVLPMTEIHWYQLSTAENELGVVIATAEGS 168
>gi|405976441|gb|EKC40947.1| 3'-5' exoribonuclease CSL4-like protein, partial [Crassostrea
gigas]
Length = 193
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 106/155 (68%), Gaps = 4/155 (2%)
Query: 10 GQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPT 69
GQRIC+L+ G GTY R GY+YS+LAG + + ED S+IEV + +++ +VP+
Sbjct: 6 GQRICRLEETCKRGNGTYSRNGYIYSSLAGYLHTS---EDEDGKSLIEVKTQEEQNVVPS 62
Query: 70 PGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGD 129
+VT RI V CK ++SVG L FR +R+E+VRATE D++EMYKC+RPGD
Sbjct: 63 VDAIVTTRITNVNPRFCKCLILSVGKIPLREPFRGQIRKEDVRATEKDKVEMYKCFRPGD 122
Query: 130 IILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
I++A+ L L + HSY LSTAENELGVVIA SEA +
Sbjct: 123 IVVAKVLSLGDAHSYILSTAENELGVVIATSEAGA 157
>gi|156407009|ref|XP_001641337.1| predicted protein [Nematostella vectensis]
gi|156228475|gb|EDO49274.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 109/159 (68%), Gaps = 6/159 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
I +PG+R+ + G GTY R G++YS LAG +HVE + + SV+ + +++
Sbjct: 5 IAVPGERLGSAE-QYSAGNGTYSRHGHIYSCLAG----YRHVEKDGDKSVMSIVREEEKD 59
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+VP G +VT ++ +V CKA ++ V +TAL TFR ++R+E+VRATE DR+E+YKC+
Sbjct: 60 VVPKIGSIVTCKVTSVNPRFCKAAILGVESTALKETFRGMIRKEDVRATEKDRVEIYKCF 119
Query: 126 RPGDIILARL-PLKELHSYQLSTAENELGVVIALSEAAS 163
RPGDI++AR+ L + HSY LSTAENELGVV A SEA +
Sbjct: 120 RPGDIVVARVTSLGDAHSYLLSTAENELGVVFAKSEAGA 158
>gi|524897541|ref|XP_005105231.1| PREDICTED: exosome complex component CSL4-like [Aplysia
californica]
Length = 197
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 108/163 (66%), Gaps = 4/163 (2%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
M+ +C+PGQR+ + D V G GTYVR G++YS+L G +N+ + ++V+ + V +
Sbjct: 1 MAASIVCVPGQRLSRADDTHVAGEGTYVRGGFIYSSLVGW--LNELKTEEQKVT-LTVQT 57
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE 120
++PT VVTAR+ V CK ++SVG + L FR ++R+E+VRATE DR+E
Sbjct: 58 EDSCTVIPTIDAVVTARVTNVNPRFCKCAILSVGTSPLRDVFRGMIRKEDVRATEKDRVE 117
Query: 121 MYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
M+KCYRPGDII AR L L + SY L+TAENELGV +A SEA
Sbjct: 118 MHKCYRPGDIITARVLSLGDAQSYLLTTAENELGVAMATSEAG 160
>gi|260828057|ref|XP_002608980.1| hypothetical protein BRAFLDRAFT_287100 [Branchiostoma floridae]
gi|229294334|gb|EEN64990.1| hypothetical protein BRAFLDRAFT_287100 [Branchiostoma floridae]
Length = 190
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 117/187 (62%), Gaps = 11/187 (5%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVP 68
PG+R+ +D G GTYV GY+YS LAG ++K + KE+S++EV +KE VP
Sbjct: 8 PGERLFS-TADCEAGPGTYVHHGYIYSCLAG--YMHKRKTEGKELSIVEVIR-QKEDAVP 63
Query: 69 TPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPG 128
G +VTA++ +V +CK + V T L FR L+R+E+VRATE DR+EMYKC+RPG
Sbjct: 64 RIGSIVTAKVTSVSGRMCKCAITCVERTTLREPFRGLIRKEDVRATEKDRVEMYKCFRPG 123
Query: 129 DIILAR-LPLKELHSYQLSTAENELGVVIALSEAA------SLFRSSEKLTNDIEFLKQE 181
DI+LAR L L + + Y LSTAENELGVV+ALSEA S T EF K
Sbjct: 124 DIVLARVLSLGDANCYLLSTAENELGVVLALSEAGAQMVPVSWCDMQCPKTGSKEFRKVA 183
Query: 182 KLKLYEE 188
K++L +E
Sbjct: 184 KVQLQQE 190
>gi|391327249|ref|XP_003738117.1| PREDICTED: exosome complex component CSL4-like isoform 1
[Metaseiulus occidentalis]
Length = 195
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 106/159 (66%), Gaps = 4/159 (2%)
Query: 6 ICIPGQRICQLDSD-IVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKE 64
+C+PG+RIC L D + G GTY +QGY+Y++L G + I K +D+ + S++E+
Sbjct: 5 MCVPGKRICALAEDKFISGPGTYSQQGYIYASLTGVLQITK--QDDGKKSLVEIRRPMGR 62
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
+ VPTPG VVT ++ ++ Q K ++ + T L FR ++RRE+VRA E D++EM K
Sbjct: 63 LAVPTPGSVVTCKVTSINQRYAKVSILCIEETELKEPFRGVIRREDVRAFEKDKVEMVKS 122
Query: 125 YRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
+ PGD++LA+ L + + SY L+TAENELGVVIALS A
Sbjct: 123 FHPGDVVLAKTLTMGDAMSYILTTAENELGVVIALSSAG 161
>gi|391327251|ref|XP_003738118.1| PREDICTED: exosome complex component CSL4-like isoform 2
[Metaseiulus occidentalis]
Length = 198
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 106/159 (66%), Gaps = 4/159 (2%)
Query: 6 ICIPGQRICQLDSD-IVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKE 64
+C+PG+RIC L D + G GTY +QGY+Y++L G + I K +D+ + S++E+
Sbjct: 8 MCVPGKRICALAEDKFISGPGTYSQQGYIYASLTGVLQITK--QDDGKKSLVEIRRPMGR 65
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
+ VPTPG VVT ++ ++ Q K ++ + T L FR ++RRE+VRA E D++EM K
Sbjct: 66 LAVPTPGSVVTCKVTSINQRYAKVSILCIEETELKEPFRGVIRREDVRAFEKDKVEMVKS 125
Query: 125 YRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
+ PGD++LA+ L + + SY L+TAENELGVVIALS A
Sbjct: 126 FHPGDVVLAKTLTMGDAMSYILTTAENELGVVIALSSAG 164
>gi|357603889|gb|EHJ63965.1| hypothetical protein KGM_08299 [Danaus plexippus]
Length = 223
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 103/159 (64%), Gaps = 3/159 (1%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
ICIPG R+ D + G GTY +GY+YS L G + + ++ ++ + I V S +
Sbjct: 12 ICIPGMRLSSSDKGHLAGPGTYELKGYIYSMLTGVLKTEE--DEERKATRICVVSPRTPS 69
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
++P GD+VTA++ V ++ VG + L R +R +L++E+++ T+ DRI+ YKC+
Sbjct: 70 VLPVTGDIVTAKVTVVNSRQVNCIILCVGPSPLVRPYRGILKKEDIKFTDKDRIDPYKCF 129
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
RPGDIILAR LP+ E+H Y LSTAENELGVVIA +E +
Sbjct: 130 RPGDIILARVLPMTEIHWYHLSTAENELGVVIATAEGSP 168
>gi|505845903|ref|XP_004616431.1| PREDICTED: exosome complex component CSL4 [Sorex araneus]
Length = 195
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 108/163 (66%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG +S + +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-TPGSGTYTRHGYIFSSLAGCLSKS---SENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGTIVTCKVSSINTRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SEA
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSEAG 161
>gi|224495967|ref|NP_001139039.1| 3'-5' exoribonuclease CSL4 homolog [Danio rerio]
Length = 194
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 112/165 (67%), Gaps = 6/165 (3%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
MS +C+PG+R+C + D + G GTY+R GY++++LAG V + K+ + +E+ VI V
Sbjct: 1 MSPMKLCVPGERLCSTE-DCIPGTGTYLRHGYIFASLAGYV-LRKN--EGEELPVISVVR 56
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE 120
+ ++P G +VT ++ ++ K H++ VG+T L FR +RRE+VRATE D++E
Sbjct: 57 ETEAQLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRREDVRATEKDKVE 116
Query: 121 MYKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAAS 163
YK +RPGDI+LA+ + L ++ S Y L+TAENELGVV+A SEA +
Sbjct: 117 TYKSFRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGA 161
>gi|126272914|ref|XP_001366739.1| PREDICTED: exosome complex component CSL4-like [Monodelphis
domestica]
Length = 195
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 109/163 (66%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ C+PG+R+C ++ + G GTY R GY++S+L+G + DN E+ V+ V+
Sbjct: 3 PPLKYCVPGERLCNVE-EASPGSGTYTRHGYIFSSLSGCLV---KTSDNGELPVVSVTRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGTIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|507639190|ref|XP_004701088.1| PREDICTED: exosome complex component CSL4 [Echinops telfairi]
Length = 195
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 109/163 (66%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ C+PG+R+C L+ G GTY R GY++S+LAG ++ + +N + V+ V
Sbjct: 3 PPVRYCVPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLAKS---SENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++PT G VVT ++ ++ K H++ VG+T L +FR +R+E++RATE D++E+
Sbjct: 59 TESQLMPTVGAVVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDIRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|195384852|ref|XP_002051126.1| GJ14547 [Drosophila virilis]
gi|194147583|gb|EDW63281.1| GJ14547 [Drosophila virilis]
Length = 214
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 102/154 (66%), Gaps = 3/154 (1%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
IC+PG+R+C+++ +I+ G+GTY + GY+Y+ +G V I+ E ++ ++ V +
Sbjct: 20 ICLPGERLCRVEDNIIVGQGTYEQGGYIYACKSGIVHID---ETTEKCQIVSVHKPGFHL 76
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+P GDVVTAR++ K + VGN L ++R LLR+E+VR TE DR+++YK +
Sbjct: 77 TIPATGDVVTARVLVTTPKFAKCAIFCVGNVLLESSYRGLLRKEDVRETEKDRVDIYKSF 136
Query: 126 RPGDIILARLPLKELHSYQLSTAENELGVVIALS 159
+PGD+ILAR+ + S+ LSTAE ELGVV+A +
Sbjct: 137 KPGDVILARVVNQMEQSFMLSTAEAELGVVVAYA 170
>gi|525001652|ref|XP_005048550.1| PREDICTED: exosome complex component CSL4 isoform X2 [Ficedula
albicollis]
Length = 195
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 107/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP C+PG+R+C + + G GTY R G+++S+LAG + + EDN E+ V+ V
Sbjct: 3 PPARYCVPGERLCSTE-EATAGSGTYTRHGFIFSSLAGC--LERKNEDN-ELPVVSVVRD 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G VVT ++ ++ K H++ VG+T L TFR +RRE++RATE D++E+
Sbjct: 59 SESQLLPNVGAVVTCKVCSINSRFAKVHILYVGSTPLKSTFRGTIRREDIRATEKDKVEV 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RP DI+LA+ + L + S Y LSTAENELGVV+A SEA
Sbjct: 119 YKSFRPSDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAG 161
>gi|195118728|ref|XP_002003888.1| GI18151 [Drosophila mojavensis]
gi|193914463|gb|EDW13330.1| GI18151 [Drosophila mojavensis]
Length = 214
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 103/154 (66%), Gaps = 3/154 (1%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
IC+PG R+C+++ +IV G+GTY + GY+Y++ +G ++I+ E N++ ++ V +
Sbjct: 20 ICLPGDRLCRVEDNIVVGQGTYEQGGYIYASKSGIINID---ESNEKCQIVSVHKPGFHL 76
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+P GDVVTAR++ K + V N L ++R LLR+E+VR T+ DR+++YK +
Sbjct: 77 TIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRETDKDRVDIYKSF 136
Query: 126 RPGDIILARLPLKELHSYQLSTAENELGVVIALS 159
+PGD+ILAR+ + S+ LSTAE ELGVV+A +
Sbjct: 137 KPGDVILARVVNQMEQSFMLSTAEAELGVVVAYA 170
>gi|291404567|ref|XP_002718659.1| PREDICTED: exosomal core protein CSL4 [Oryctolagus cuniculus]
Length = 195
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 107/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLT---KTSENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 AESQLLPDVGSIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|62751675|ref|NP_001015529.1| exosome complex component CSL4 [Bos taurus]
gi|59858307|gb|AAX08988.1| exosomal core protein CSL4 [Bos taurus]
gi|126717389|gb|AAI33441.1| Exosome component 1 [Bos taurus]
gi|296472668|tpg|DAA14783.1| TPA: exosomal core protein CSL4 [Bos taurus]
gi|440901550|gb|ELR52467.1| 3'-5' exoribonuclease CSL4-like protein [Bos grunniens mutus]
Length = 195
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 107/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ +N + VI V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLT---KTSENGALPVISVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|507572761|ref|XP_004669969.1| PREDICTED: exosome complex component CSL4 isoform X1 [Jaculus
jaculus]
Length = 195
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 107/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ +N + VI V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLT---KTSENGALPVISVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESRLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|57107227|ref|XP_534981.1| PREDICTED: exosome complex component CSL4 isoform 1 [Canis lupus
familiaris]
Length = 195
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 108/163 (66%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ + +N + VI V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLTKS---SENGALPVISVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGTIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|301763224|ref|XP_002917030.1| PREDICTED: 3'-5' exoribonuclease CSL4 homolog [Ailuropoda
melanoleuca]
gi|410975790|ref|XP_003994312.1| PREDICTED: exosome complex component CSL4 [Felis catus]
gi|472380253|ref|XP_004409530.1| PREDICTED: exosome complex component CSL4 [Odobenus rosmarus
divergens]
gi|281348504|gb|EFB24088.1| hypothetical protein PANDA_005192 [Ailuropoda melanoleuca]
Length = 195
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 108/163 (66%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ + +N + VI V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLTKS---SENGALPVISVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|194761250|ref|XP_001962842.1| GF14226 [Drosophila ananassae]
gi|190616539|gb|EDV32063.1| GF14226 [Drosophila ananassae]
Length = 202
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 102/154 (66%), Gaps = 3/154 (1%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+C+PG+R+C+++ +IV G GTY + GY+Y++ +G V+I E + V+ V +
Sbjct: 10 VCLPGERLCRIEDNIVLGVGTYEQNGYIYASKSGIVNIE---ESGENCQVVNVHKPGFHL 66
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+PT GD+VTAR++ K + V N L ++R LLR+E+VR TE DR+++YK +
Sbjct: 67 TIPTTGDIVTARVLVTTPKFVKCAIFCVRNVLLENSYRGLLRKEDVRETEKDRVDIYKSF 126
Query: 126 RPGDIILARLPLKELHSYQLSTAENELGVVIALS 159
+PGD+ILAR+ + S+ L+TAENELGVVIA +
Sbjct: 127 KPGDVILARVINQMEQSFLLTTAENELGVVIAYA 160
>gi|511850553|ref|XP_004749615.1| PREDICTED: exosome complex component CSL4 [Mustela putorius furo]
gi|511952791|ref|XP_004794768.1| PREDICTED: exosome complex component CSL4 [Mustela putorius furo]
Length = 207
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 108/163 (66%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ + +N + VI V
Sbjct: 15 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLTKS---SENGALPVISVMRE 70
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 71 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 130
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 131 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 173
>gi|224052677|ref|XP_002194864.1| PREDICTED: exosome complex component CSL4 [Taeniopygia guttata]
Length = 195
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 107/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ C+ G+R+C + + G GTY R G+++S+LAG + + EDN E+ V+ V
Sbjct: 3 PPLSRCVAGERLCSTE-EATAGSGTYTRHGFIFSSLAGC--LERKNEDN-ELPVVSVVRD 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
K ++P G VVT ++ ++ K H++ VG+T L TFR +R+E++RATE D++E+
Sbjct: 59 SKSQLLPNVGAVVTCKVCSINSRFAKVHILYVGSTPLKSTFRGTIRKEDIRATEKDKVEV 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RP DI+LA+ + L + S Y LSTAENELGVV+A SEA
Sbjct: 119 YKSFRPSDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAG 161
>gi|22267446|ref|NP_079920.1| exosome complex component CSL4 isoform 1 [Mus musculus]
gi|28380043|sp|Q9DAA6.1|EXOS1_MOUSE RecName: Full=Exosome complex component CSL4; AltName: Full=Exosome
component 1
gi|12838900|dbj|BAB24368.1| unnamed protein product [Mus musculus]
gi|19353756|gb|AAH24423.1| Exosome component 1 [Mus musculus]
gi|148709921|gb|EDL41867.1| exosome component 1, isoform CRA_b [Mus musculus]
Length = 195
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 105/163 (64%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG + +N V V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCL---MKTSENGAVPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G VVT ++ ++ K H++ VG+T L FR +R+E++RATE D++E+
Sbjct: 59 TESQLLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|344274905|ref|XP_003409255.1| PREDICTED: exosome complex component CSL4-like [Loxodonta africana]
Length = 195
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 108/163 (66%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ C+PG+R+C L+ G GTY R GY++S+LAG ++ + +N + V+ V
Sbjct: 3 PPVRYCVPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLTKS---SENGALPVVSVRRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G VVT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|194041797|ref|XP_001928838.1| PREDICTED: exosome complex component CSL4 [Sus scrofa]
Length = 195
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 107/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ + +N + VI V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLTKS---SENGALPVISVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TDSQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSHYLLTTAENELGVVVAHSESG 161
>gi|471358929|ref|XP_004370044.1| PREDICTED: exosome complex component CSL4 [Trichechus manatus
latirostris]
gi|478507347|ref|XP_004427961.1| PREDICTED: exosome complex component CSL4 [Ceratotherium simum
simum]
Length = 195
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 108/163 (66%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ + +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLTKS---SENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|443699200|gb|ELT98810.1| hypothetical protein CAPTEDRAFT_21100 [Capitella teleta]
Length = 202
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 102/164 (62%), Gaps = 3/164 (1%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
M+N IC+PG R+C D G GT+ G++YS+LAG + + D K + V S
Sbjct: 1 MANSEICVPGDRLCIADDTHQNGVGTFTVAGFIYSSLAG-FRQDVLLPDGK-IQVKVTSC 58
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE 120
K + VP G +VTARI+++ CK ++SV L FR +RRE++RATE D++E
Sbjct: 59 SKTQGTVPEVGSLVTARILSMNPRFCKCSILSVDGIVLHEAFRGTIRREDIRATEKDKVE 118
Query: 121 MYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
+YK +RPGDIILA+ L + E Y L+TAENELGVV+A SEA
Sbjct: 119 VYKSFRPGDIILAKVLMIGEGLMYLLTTAENELGVVVATSEAGC 162
>gi|109463887|ref|XP_001054866.1| PREDICTED: exosome complex component CSL4-like isoform 1 [Rattus
norvegicus]
gi|354471138|ref|XP_003497800.1| PREDICTED: exosome complex component CSL4-like isoform 1
[Cricetulus griseus]
gi|392345105|ref|XP_003749167.1| PREDICTED: exosome complex component CSL4-like [Rattus norvegicus]
gi|149040177|gb|EDL94215.1| rCG57589, isoform CRA_a [Rattus norvegicus]
gi|149040180|gb|EDL94218.1| rCG57589, isoform CRA_a [Rattus norvegicus]
Length = 195
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 106/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLT---KTSENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G VVT ++ ++ K H++ VG+T L FR +R+E++RATE D++E+
Sbjct: 59 TESQLLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|194861810|ref|XP_001969861.1| GG10323 [Drosophila erecta]
gi|190661728|gb|EDV58920.1| GG10323 [Drosophila erecta]
Length = 204
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 5/155 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKE-VSVIEVSSYKKE 64
+C+PG+R+C+ + +IV G GTY + GY+Y++ +G V H+E++ E V+ V
Sbjct: 10 VCLPGERLCRTEDNIVLGIGTYEQNGYIYASKSGIV----HIEESGENCQVVSVHKPGFH 65
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
+ +P GDVVTAR++ K + V N L ++R LLR+E+VR TE DR+++YK
Sbjct: 66 LTIPATGDVVTARVLVTTPKFVKCAIFCVRNVLLESSYRGLLRKEDVRETEKDRVDIYKS 125
Query: 125 YRPGDIILARLPLKELHSYQLSTAENELGVVIALS 159
+RPGD+ILAR+ + +S+ L+TAENELGVVIA +
Sbjct: 126 FRPGDVILARVINQMENSFLLTTAENELGVVIAYA 160
>gi|241647943|ref|XP_002410000.1| exosomal 3'-5' exoribonuclease complex, subunit ski4, putative
[Ixodes scapularis]
gi|215501492|gb|EEC10986.1| exosomal 3'-5' exoribonuclease complex, subunit ski4, putative
[Ixodes scapularis]
Length = 186
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 103/153 (67%), Gaps = 6/153 (3%)
Query: 10 GQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPT 69
GQR+C +GG+GTYV+ GY+YS+LAG +I + + +K++ ++ S K VPT
Sbjct: 7 GQRLCAAGDSFIGGKGTYVQHGYIYSSLAGRFTIER--QKDKKIVQVQRSMDKN---VPT 61
Query: 70 PGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGD 129
PG++VTA+I AV CK +I++ + L FR ++R+E+V TE D++EM+K +R GD
Sbjct: 62 PGNIVTAKITAVTHRFCKCSIIAIEDCELWEPFRGIIRKEDVHETEKDKVEMHKSFRMGD 121
Query: 130 IILAR-LPLKELHSYQLSTAENELGVVIALSEA 161
I+LAR + + + Y L+TAEN LGVV+ALS +
Sbjct: 122 IVLARVMSIGDALFYYLTTAENMLGVVVALSAS 154
>gi|149690173|ref|XP_001501548.1| PREDICTED: exosome complex component CSL4-like [Equus caballus]
Length = 195
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 108/163 (66%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ C+PG+R+C L+ G GTY R GY++S+LAG ++ + +N + V+ V
Sbjct: 3 PPVRYCVPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLTKS---SENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|291227929|ref|XP_002733935.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 204
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 109/176 (61%), Gaps = 10/176 (5%)
Query: 23 GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQ 82
G GTYVRQ +YS+LAG V E++ ++ ++ V+ ++ ++P G +VTA++ +
Sbjct: 32 GNGTYVRQQCIYSSLAGFV---HEQENDDKLPILNVTREEQHTVIPEVGSIVTAKVTNIN 88
Query: 83 QHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELH 141
CK ++ V ++ L FR ++R+++VRATE DRIEMYKC+RPGDIILA+ L L +
Sbjct: 89 PRFCKCTILCVEDSPLKDKFRGMIRKDDVRATEKDRIEMYKCFRPGDIILAKVLSLGDAQ 148
Query: 142 SYQLSTAENELGVVIALSEAA------SLFRSSEKLTNDIEFLKQEKLKLYEELSS 191
SY L+TAENE GVV+A SEA S TN IEF K K++ L+S
Sbjct: 149 SYLLTTAENEFGVVLAESEAGVNMVPISWCEMQCPKTNIIEFRKVAKVQPQHILTS 204
>gi|348588120|ref|XP_003479815.1| PREDICTED: exosome complex component CSL4 isoform 1 [Cavia
porcellus]
Length = 195
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 107/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLTKR---SENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|432113107|gb|ELK35685.1| Exosome complex component CSL4 [Myotis davidii]
gi|521037931|gb|EPQ19708.1| Exosome complex component CSL4 [Myotis brandtii]
Length = 195
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 108/163 (66%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ K E N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCMT--KSCE-NGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|194332723|ref|NP_001123851.1| exosome component 1 [Xenopus (Silurana) tropicalis]
gi|189441871|gb|AAI67725.1| LOC100170616 protein [Xenopus (Silurana) tropicalis]
Length = 194
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 106/159 (66%), Gaps = 6/159 (3%)
Query: 7 CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVI 66
C+PG+R+C + D G GT+ R GY++++LAG + + K DN + VI V +
Sbjct: 7 CVPGERLCSTE-DCAPGYGTFCRHGYIFASLAGYI-VKK--TDNGLMPVISVVRETDSHL 62
Query: 67 VPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYR 126
+P G VVT ++ ++ K ++ +G+T LS TFR +R+E++RATE D++E+YK +R
Sbjct: 63 LPDVGSVVTCKVTSINSRFAKVQIMYIGSTPLSNTFRGTIRKEDIRATEKDKVEVYKSFR 122
Query: 127 PGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAAS 163
PGDI++A+ + L ++ S Y LSTAENELGVV+A SEA +
Sbjct: 123 PGDIVMAKVISLGDIQSNYLLSTAENELGVVVAHSEAGA 161
>gi|466001581|ref|XP_004268452.1| PREDICTED: exosome complex component CSL4 [Orcinus orca]
gi|470607571|ref|XP_004314635.1| PREDICTED: exosome complex component CSL4 [Tursiops truncatus]
Length = 195
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 107/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG + + +N + VI V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLIKS---SENGALPVISVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|498928059|ref|XP_004539105.1| PREDICTED: exosome complex component CSL4-like isoform X1
[Maylandia zebra]
Length = 228
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 109/164 (66%), Gaps = 6/164 (3%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
MS +C+PG ++C + D + G G Y+R GY+YS+LAG V + K+ + +E+ VI V
Sbjct: 1 MSPMKLCVPGDKLCSAE-DCIPGTGVYLRHGYIYSSLAGYV-LRKN--EGEELPVISVVR 56
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE 120
+ ++P G +VT ++ ++ K H++ VG+T L FR +R+E+VRATE D++E
Sbjct: 57 ETETQLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVE 116
Query: 121 MYKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L ++ S Y L+TAENELGVV+A SEA
Sbjct: 117 TYKSFRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAG 160
>gi|403259803|ref|XP_003922387.1| PREDICTED: exosome complex component CSL4 [Saimiri boliviensis
boliviensis]
Length = 195
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 107/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG + + +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLMKS---SENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|498928061|ref|XP_004539106.1| PREDICTED: exosome complex component CSL4-like isoform X2
[Maylandia zebra]
Length = 194
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 110/165 (66%), Gaps = 6/165 (3%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
MS +C+PG ++C + D + G G Y+R GY+YS+LAG V + K+ + +E+ VI V
Sbjct: 1 MSPMKLCVPGDKLCSAE-DCIPGTGVYLRHGYIYSSLAGYV-LRKN--EGEELPVISVVR 56
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE 120
+ ++P G +VT ++ ++ K H++ VG+T L FR +R+E+VRATE D++E
Sbjct: 57 ETETQLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVE 116
Query: 121 MYKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAAS 163
YK +RPGDI+LA+ + L ++ S Y L+TAENELGVV+A SEA +
Sbjct: 117 TYKSFRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGA 161
>gi|507622086|ref|XP_004625565.1| PREDICTED: exosome complex component CSL4 isoform X1 [Octodon
degus]
Length = 195
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 107/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ C+PG+R+C L+ G GTY R GY++S+LAG ++ +N + V+ V
Sbjct: 3 PPVRYCVPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLTKR---SENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|348536789|ref|XP_003455878.1| PREDICTED: exosome complex component CSL4-like [Oreochromis
niloticus]
Length = 194
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 109/165 (66%), Gaps = 6/165 (3%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
MS +C+PG ++C D + G G Y+R GY+YS+LAG V + K+ + +E+ VI V
Sbjct: 1 MSPMKLCVPGDKLCS-SEDCIPGTGVYLRHGYIYSSLAGYV-LRKN--EGEELPVISVVR 56
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE 120
+ ++P G +VT ++ ++ K H++ VG+T L FR +R+E+VRATE D++E
Sbjct: 57 ETETQLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVE 116
Query: 121 MYKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAAS 163
YK +RPGDI+LA+ + L ++ S Y L+TAENELGVV+A SEA +
Sbjct: 117 TYKSFRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGA 161
>gi|431838940|gb|ELK00869.1| 3'-5' exoribonuclease CSL4 like protein [Pteropus alecto]
Length = 195
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 107/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ + +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCMTKS---SENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+T ENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTGENELGVVVAHSESG 161
>gi|395828347|ref|XP_003787345.1| PREDICTED: exosome complex component CSL4 [Otolemur garnettii]
Length = 195
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 106/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLT---KTSENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A E+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHGESG 161
>gi|504135149|ref|XP_004580059.1| PREDICTED: exosome complex component CSL4 isoform X1 [Ochotona
princeps]
Length = 195
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 106/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-TPGSGTYTRHGYIFSSLAGCLT---KTSENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K ++ VG+T L +FR +RRE++RATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVQILYVGSTPLKNSFRGTIRREDIRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|296220921|ref|XP_002756540.1| PREDICTED: exosome complex component CSL4 [Callithrix jacchus]
Length = 195
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 107/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG + + +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLMKS---SENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E++RATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDIRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|426252875|ref|XP_004020128.1| PREDICTED: exosome complex component CSL4 [Ovis aries]
Length = 195
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 106/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ +N + VI V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLT---KTSENGALPVISVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K ++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVRILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|47223879|emb|CAG06056.1| unnamed protein product [Tetraodon nigroviridis]
Length = 192
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 110/162 (67%), Gaps = 6/162 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+CIPG+++C + D + G G Y+R G+++S+LAG V I K + KE+ +I V +
Sbjct: 5 VCIPGEKLCSAE-DCIPGPGVYLRHGHIHSSLAGYV-IRK--TEGKELPMISVVRGTESQ 60
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
++P G +VT ++ ++ K H++ VG+T+L FR +R+E+VRATE D++E+YK +
Sbjct: 61 LLPDVGAIVTCKVTSINPRFAKVHILKVGSTSLKDHFRGTIRKEDVRATEKDKVEIYKSF 120
Query: 126 RPGDIILAR-LPLKELH-SYQLSTAENELGVVIALSEAASLF 165
RPGDI+LA+ + L + SY L+TAENELGVV+A SE+ ++
Sbjct: 121 RPGDIVLAKVMSLGNVESSYLLTTAENELGVVVAHSESGAVM 162
>gi|432847858|ref|XP_004066185.1| PREDICTED: exosome complex component CSL4-like [Oryzias latipes]
Length = 195
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 112/164 (68%), Gaps = 6/164 (3%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
MS +C+PG ++C ++ D + G G Y+R GY+YS+LAG V + K+ + +++ VI V
Sbjct: 1 MSPTRLCVPGDKLCSVE-DCILGTGVYLRHGYIYSSLAGYV-LKKN--EGEQLPVISVVR 56
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE 120
+ ++P G +VT ++ ++ K H++ VG+T L FR +R+E+VRATE D++E
Sbjct: 57 ETEVQLLPDVGAIVTCKVTSINSRFAKVHILYVGSTPLKDLFRGTIRKEDVRATEKDKVE 116
Query: 121 MYKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
M++ +RPGDI+LA+ + L ++ S Y L+TAENELGVV+A S+AA
Sbjct: 117 MHRSFRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSDAA 160
>gi|24583644|ref|NP_609492.1| Csl4 [Drosophila melanogaster]
gi|7297825|gb|AAF53074.1| Csl4 [Drosophila melanogaster]
gi|20152101|gb|AAM11410.1| RE36848p [Drosophila melanogaster]
gi|220948428|gb|ACL86757.1| Csl4-PA [synthetic construct]
gi|220957608|gb|ACL91347.1| Csl4-PA [synthetic construct]
Length = 204
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 99/154 (64%), Gaps = 3/154 (1%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+C+PG+R+C+ + IV G GTY + GY+Y++ +G V+I + + V+ V +
Sbjct: 10 VCLPGERLCRTEDSIVLGIGTYEQNGYIYASKSGIVNIE---DSGDKCQVVSVHKPGFHL 66
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+P GDVVTAR++ K + V N L ++R LLR+E+VR TE DR+++YK +
Sbjct: 67 TIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRETEKDRVDIYKSF 126
Query: 126 RPGDIILARLPLKELHSYQLSTAENELGVVIALS 159
RPGD+ILAR+ + S+ L+TAENELGVVIA +
Sbjct: 127 RPGDVILARVINQLEQSFLLTTAENELGVVIAYA 160
>gi|525001650|ref|XP_005048549.1| PREDICTED: exosome complex component CSL4 isoform X1 [Ficedula
albicollis]
Length = 212
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 104/158 (65%), Gaps = 6/158 (3%)
Query: 7 CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVI 66
C+ G+R+C + + G GTY R G+++S+LAG + + EDN E+ V+ V + +
Sbjct: 25 CVAGERLCSTE-EATAGSGTYTRHGFIFSSLAGC--LERKNEDN-ELPVVSVVRDSESQL 80
Query: 67 VPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYR 126
+P G VVT ++ ++ K H++ VG+T L TFR +RRE++RATE D++E+YK +R
Sbjct: 81 LPNVGAVVTCKVCSINSRFAKVHILYVGSTPLKSTFRGTIRREDIRATEKDKVEVYKSFR 140
Query: 127 PGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
P DI+LA+ + L + S Y LSTAENELGVV+A SEA
Sbjct: 141 PSDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAG 178
>gi|512918849|ref|XP_004903880.1| PREDICTED: exosome complex component CSL4 isoform X1
[Heterocephalus glaber]
gi|512952486|ref|XP_004838645.1| PREDICTED: exosome complex component CSL4 isoform X1
[Heterocephalus glaber]
gi|351712058|gb|EHB14977.1| 3'-5' exoribonuclease CSL4-like protein [Heterocephalus glaber]
Length = 195
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 108/163 (66%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ C+PG+R+C L+ G GTY R GY++S+LAG ++ + +N + V+ V
Sbjct: 3 PPVRYCVPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLTKS---SENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K +++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVYILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|410917201|ref|XP_003972075.1| PREDICTED: exosome complex component CSL4-like [Takifugu rubripes]
Length = 193
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 110/162 (67%), Gaps = 6/162 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+CIPG+++C + D V G G Y+R GY++S+LAG V + K + KE+ +I V +
Sbjct: 5 VCIPGEKLCSAE-DCVLGTGVYLRHGYIHSSLAGYV-VRK--SEGKELPMISVVRGTELQ 60
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
++P G +VT ++ ++ K H++ VG+T+L F+ +R+E+VRATE D++E+YK +
Sbjct: 61 LLPDVGAIVTCKVTSINPRFAKVHILKVGSTSLKDHFKGTIRKEDVRATEKDKVEIYKSF 120
Query: 126 RPGDIILAR-LPLKELH-SYQLSTAENELGVVIALSEAASLF 165
RPGDI+LA+ + L + SY L+TAENELGVV+A SE+ ++
Sbjct: 121 RPGDIVLAKVMSLGNVESSYLLTTAENELGVVVAHSESGAVM 162
>gi|507940568|ref|XP_004680636.1| PREDICTED: exosome complex component CSL4 [Condylura cristata]
Length = 195
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 106/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG + + +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLMKS---SENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK + PGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFHPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|195472096|ref|XP_002088338.1| Csl4 [Drosophila yakuba]
gi|194174439|gb|EDW88050.1| Csl4 [Drosophila yakuba]
Length = 203
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 102/155 (65%), Gaps = 5/155 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKE-VSVIEVSSYKKE 64
+C+PG+R+C+ + +IV G GT+ + GY+Y++ +G V H+E++ E V+ V
Sbjct: 9 VCLPGERLCRTEDNIVLGIGTFEQNGYIYASKSGIV----HIEESGENCQVVSVHKPGFH 64
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
+ +P GDVVTAR++ K + V N L ++R LLR+E+VR TE DR+++YK
Sbjct: 65 LTIPATGDVVTARVLVTTPKFVKCAIFCVRNVLLESSYRGLLRKEDVRETEKDRVDIYKS 124
Query: 125 YRPGDIILARLPLKELHSYQLSTAENELGVVIALS 159
+RPGD+ILAR+ + ++ L+TAENELGVVIA +
Sbjct: 125 FRPGDVILARVINQLEQTFLLTTAENELGVVIAYA 159
>gi|38048131|gb|AAR09968.1| similar to Drosophila melanogaster CG6249, partial [Drosophila
yakuba]
Length = 200
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 102/155 (65%), Gaps = 5/155 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKE-VSVIEVSSYKKE 64
+C+PG+R+C+ + +IV G GT+ + GY+Y++ +G V H+E++ E V+ V
Sbjct: 6 VCLPGERLCRTEDNIVLGIGTFEQNGYIYASKSGIV----HIEESGENCQVVSVHKPGFH 61
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
+ +P GDVVTAR++ K + V N L ++R LLR+E+VR TE DR+++YK
Sbjct: 62 LTIPATGDVVTARVLVTTPKFVKCAIFCVRNVLLESSYRGLLRKEDVRETEKDRVDIYKS 121
Query: 125 YRPGDIILARLPLKELHSYQLSTAENELGVVIALS 159
+RPGD+ILAR+ + ++ L+TAENELGVVIA +
Sbjct: 122 FRPGDVILARVINQLEQTFLLTTAENELGVVIAYA 156
>gi|297687146|ref|XP_002821091.1| PREDICTED: exosome complex component CSL4 [Pongo abelii]
Length = 195
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 106/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG + + +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLMKS---SENGALPVVSVVRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+ L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDTQSNYLLTTAENELGVVVAHSESG 161
>gi|7705612|ref|NP_057130.1| exosome complex component CSL4 [Homo sapiens]
gi|383872322|ref|NP_001244778.1| exosome component 1 [Macaca mulatta]
gi|114632191|ref|XP_507960.2| PREDICTED: exosome complex component CSL4 [Pan troglodytes]
gi|402881114|ref|XP_003904125.1| PREDICTED: exosome complex component CSL4 [Papio anubis]
gi|14285410|sp|Q9Y3B2.1|EXOS1_HUMAN RecName: Full=Exosome complex component CSL4; AltName: Full=Exosome
component 1
gi|4929685|gb|AAD34103.1|AF151866_1 CGI-108 protein [Homo sapiens]
gi|18314657|gb|AAH22067.1| Exosome component 1 [Homo sapiens]
gi|119570321|gb|EAW49936.1| exosome component 1 [Homo sapiens]
gi|189053953|dbj|BAG36460.1| unnamed protein product [Homo sapiens]
gi|208966238|dbj|BAG73133.1| exosome component 1 [synthetic construct]
gi|325463455|gb|ADZ15498.1| exosome component 1 [synthetic construct]
gi|355562674|gb|EHH19268.1| hypothetical protein EGK_19945 [Macaca mulatta]
gi|355783002|gb|EHH64923.1| hypothetical protein EGM_18255 [Macaca fascicularis]
Length = 195
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 106/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG + + +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLMKS---SENGALPVVSVVRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+ L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|122920915|pdb|2NN6|I Chain I, Structure Of The Human Rna Exosome Composed Of Rrp41,
Rrp45, Rrp46, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, And Rrp40
Length = 209
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 106/163 (65%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG + + +N + V+ V
Sbjct: 17 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLMKS---SENGALPVVSVVRE 72
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+ L +FR +R+E+VRATE D++E+
Sbjct: 73 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEI 132
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 133 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 175
>gi|225719628|gb|ACO15660.1| 3-5 exoribonuclease CSL4 homolog [Caligus clemensi]
Length = 210
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 103/163 (63%), Gaps = 14/163 (8%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+ +PG R+C D D V G GTY + GY+YS+LAGT+ K + D K+VS SS +
Sbjct: 6 LVVPGMRLCVADEDNVPGPGTYSQNGYIYSSLAGTM---KLLRDKKDVSKSGSSSEVRIT 62
Query: 66 IVP---------TPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEI 116
+VP + GD+VT R++ V K ++ V ++ LS F L+R+E+VRATE
Sbjct: 63 VVPPCSGLSDIPSLGDIVTVRVIVVNPRFAKVQILCVRDSPLSEPFWGLIRKEDVRATEK 122
Query: 117 DRIEMYKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIA 157
D++E+YK +R GDI+L+R + L E S Y LSTAENELGVVIA
Sbjct: 123 DKVELYKSFRAGDIVLSRVISLGEASSGYLLSTAENELGVVIA 165
>gi|195030438|ref|XP_001988075.1| GH10967 [Drosophila grimshawi]
gi|193904075|gb|EDW02942.1| GH10967 [Drosophila grimshawi]
Length = 214
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 102/154 (66%), Gaps = 3/154 (1%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
IC+PG+R+C+++ +++ G GTY + GY+Y+ +G V+I+ E + VSV + + +
Sbjct: 20 ICLPGERLCRVEDNVIVGEGTYEQGGYIYACKSGIVNIDDSTEKCQIVSVHKPGFH---L 76
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+P GDVVTAR++ K + V N L ++R LLR+E+VR TE DR+++YK +
Sbjct: 77 TIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRETEKDRVDIYKSF 136
Query: 126 RPGDIILARLPLKELHSYQLSTAENELGVVIALS 159
+PGDIILAR+ + S+ LSTAE ELGVV++ +
Sbjct: 137 KPGDIILARVINQMEQSFTLSTAEAELGVVVSYA 170
>gi|198474701|ref|XP_001356791.2| GA19469 [Drosophila pseudoobscura pseudoobscura]
gi|198138507|gb|EAL33857.2| GA19469 [Drosophila pseudoobscura pseudoobscura]
Length = 205
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 101/157 (64%), Gaps = 3/157 (1%)
Query: 3 NPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYK 62
N +C+PG+R+C+++ ++V G GTY + GY+Y++ +G V+I E + V+ V
Sbjct: 8 NTVVCLPGERLCRVEDNVVLGIGTYEQNGYIYASKSGVVNIE---ESGENCQVVSVHKPG 64
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
+ +P GDVVTAR++ K + V N L ++R LLR+E+VR TE DR+++Y
Sbjct: 65 FHLTIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRETEKDRVDIY 124
Query: 123 KCYRPGDIILARLPLKELHSYQLSTAENELGVVIALS 159
K ++PGD+ILAR+ + S+ L+TAE ELGVV+A +
Sbjct: 125 KSFKPGDVILARVINQMEQSFLLTTAETELGVVVAYA 161
>gi|195434078|ref|XP_002065030.1| GK15242 [Drosophila willistoni]
gi|194161115|gb|EDW76016.1| GK15242 [Drosophila willistoni]
Length = 213
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 101/154 (65%), Gaps = 3/154 (1%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
C+PG+R+C+++ +I+ G GTY + GY+Y+ +G VSI+ E+ + VSV + + +
Sbjct: 19 FCLPGERLCRVEDNIILGLGTYEQNGYIYACKSGIVSIDDSDENTQIVSVHKPGFH---L 75
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+P GD+VTAR++ K + V N L ++R LLR+E+VR TE DR+++YK +
Sbjct: 76 TIPVTGDIVTARVLVTTPKFAKCAIFCVRNQLLENSYRGLLRKEDVRETEKDRVDIYKSF 135
Query: 126 RPGDIILARLPLKELHSYQLSTAENELGVVIALS 159
+PGD+ILAR+ + S LSTAE ELGVVIA +
Sbjct: 136 KPGDVILARVLNQLEQSILLSTAETELGVVIAYA 169
>gi|195148326|ref|XP_002015125.1| GL18587 [Drosophila persimilis]
gi|194107078|gb|EDW29121.1| GL18587 [Drosophila persimilis]
Length = 205
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 102/160 (63%), Gaps = 3/160 (1%)
Query: 3 NPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYK 62
N +C+PG+R+C+++ ++V G GTY + GY+Y++ +G V+I E + V+ V
Sbjct: 8 NTVVCLPGERLCRVEDNVVLGIGTYEQNGYIYASKSGVVNIE---ESGENCQVVSVHKPG 64
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
+ +P GDVVTAR++ K + V N L ++R LLR+E+VR TE DR+++Y
Sbjct: 65 FHLTIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRETEKDRVDIY 124
Query: 123 KCYRPGDIILARLPLKELHSYQLSTAENELGVVIALSEAA 162
K ++PGD+ILAR+ + S+ ++TAE ELGVV+A + A
Sbjct: 125 KSFKPGDVILARVINQMEQSFLITTAETELGVVVAYASDA 164
>gi|195340077|ref|XP_002036643.1| GM11135 [Drosophila sechellia]
gi|194130523|gb|EDW52566.1| GM11135 [Drosophila sechellia]
Length = 204
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 101/155 (65%), Gaps = 5/155 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKE-VSVIEVSSYKKE 64
+C+PG+R+C+ + IV G GTY + GY+Y++ +G V+I ED+ + V+ V
Sbjct: 10 VCLPGERLCRSEDSIVLGIGTYEQNGYVYASKSGIVNI----EDSGDNCQVVSVHKPGFH 65
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
+ +P GDVVTAR++ K + V N L ++R LLR+E+VR TE DR+++YK
Sbjct: 66 LTIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRETEKDRVDIYKS 125
Query: 125 YRPGDIILARLPLKELHSYQLSTAENELGVVIALS 159
+RPGD+ILAR+ + ++ L+TAENELGVVIA +
Sbjct: 126 FRPGDVILARVINQLEQTFLLTTAENELGVVIAYA 160
>gi|225709852|gb|ACO10772.1| 3-5 exoribonuclease CSL4 homolog [Caligus rogercresseyi]
Length = 222
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 105/167 (62%), Gaps = 12/167 (7%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHV--------EDNKE 52
M+ I +PG R+C D + V G GTY + GY+YS+L+GT+ + + +
Sbjct: 1 MTQDTIVVPGMRLCVADENNVSGPGTYSQNGYIYSSLSGTMRLLREKKKKEKDMSKSEVR 60
Query: 53 VSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVR 112
++V+ S E+ P+ GD+VT +++AV K +I V ++ LS FR L+R+E+VR
Sbjct: 61 ITVVPPCSVYSEI--PSLGDIVTVKVIAVNPRFAKVQIICVRDSPLSEPFRGLIRKEDVR 118
Query: 113 ATEIDRIEMYKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIA 157
ATE D+IE+YK +R GDI+L+R + L E S Y LSTAENELGVVIA
Sbjct: 119 ATEKDKIELYKSFRAGDIVLSRVISLGEASSGYLLSTAENELGVVIA 165
>gi|195578461|ref|XP_002079084.1| GD22191 [Drosophila simulans]
gi|194191093|gb|EDX04669.1| GD22191 [Drosophila simulans]
Length = 204
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 101/155 (65%), Gaps = 5/155 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKE-VSVIEVSSYKKE 64
+C+PG+R+C+ + IV G GTY + GY+Y++ +G V+I ED+ + V+ V
Sbjct: 10 VCLPGERLCRSEDSIVLGIGTYEQNGYVYASKSGIVNI----EDSGDNCQVVSVHKPGFH 65
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
+ +P GDVVTAR++ K + V N L ++R LLR+E+VR TE DR+++YK
Sbjct: 66 LTIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRETEKDRVDIYKS 125
Query: 125 YRPGDIILARLPLKELHSYQLSTAENELGVVIALS 159
+RPGD+ILAR+ + ++ L+TAENELGVVIA +
Sbjct: 126 FRPGDVILARVINQLEQTFLLTTAENELGVVIAYA 160
>gi|225717872|gb|ACO14782.1| 3-5 exoribonuclease CSL4 homolog [Caligus clemensi]
Length = 210
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 104/163 (63%), Gaps = 14/163 (8%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+ +PG R+C D + V G GTY + GY+YS+LAGT+ K + D K+VS SS +
Sbjct: 6 LVVPGMRLCVADENNVPGPGTYSQNGYIYSSLAGTM---KLLRDKKDVSKSGSSSEVRIT 62
Query: 66 IVP---------TPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEI 116
+VP + GD+VT R++ V K ++ V ++ LS FR L+R+E+VRATE
Sbjct: 63 VVPPCSGLSDIPSLGDIVTVRVIVVNPRFAKVQILCVRDSPLSEPFRGLIRKEDVRATEK 122
Query: 117 DRIEMYKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIA 157
D++E+Y+ +R GDI+L+R + L E S Y LSTAENELGVVIA
Sbjct: 123 DKVELYESFRAGDIVLSRVISLGEASSGYLLSTAENELGVVIA 165
>gi|225711060|gb|ACO11376.1| 3-5 exoribonuclease CSL4 homolog [Caligus rogercresseyi]
Length = 220
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 105/167 (62%), Gaps = 12/167 (7%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHV--------EDNKE 52
M+ I +PG R+C D + V G GTY + GY+YS+L+GT+ + + +
Sbjct: 1 MTQDTIVVPGMRLCVADENNVSGPGTYSQNGYIYSSLSGTMRLLREKKKKEKDMSKSEVR 60
Query: 53 VSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVR 112
++V+ S E+ P+ GD+VT +++AV K +I V ++ LS FR L+R+E+VR
Sbjct: 61 ITVVPPCSVYSEI--PSLGDIVTVKVIAVNPRFAKVQIICVRDSPLSEPFRGLIRKEDVR 118
Query: 113 ATEIDRIEMYKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIA 157
ATE D+IE+YK +R GDI+L+R + L E S Y LSTAENELGVVIA
Sbjct: 119 ATEKDKIELYKSFRAGDIVLSRVISLGEASSGYLLSTAENELGVVIA 165
>gi|327288885|ref|XP_003229155.1| PREDICTED: 3'-5' exoribonuclease CSL4 homolog [Anolis carolinensis]
Length = 194
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 106/164 (64%), Gaps = 6/164 (3%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
M+ C+PG+R+C L+ V G GTY R G+++++LAG + + K +N + VI V
Sbjct: 1 MAPARCCVPGERLCSLEEG-VPGSGTYTRHGFIFASLAGCL-VRK--SENGTLPVISVMR 56
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE 120
+ ++P G VT ++ ++ K H++ VG++ L FR +RRE++RATE D++E
Sbjct: 57 DVESQLLPDVGATVTCKVCSINSRFAKVHILYVGSSPLKTPFRGTIRREDIRATEKDKVE 116
Query: 121 MYKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
+YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SEA
Sbjct: 117 VYKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSEAG 160
>gi|148225176|ref|NP_001086901.1| exosome component 1 [Xenopus laevis]
gi|50415689|gb|AAH77633.1| MGC86284 protein [Xenopus laevis]
Length = 194
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 104/158 (65%), Gaps = 6/158 (3%)
Query: 8 IPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIV 67
+PG+R+C + D G GT+ R GY++++LAG + + K DN + +I V ++
Sbjct: 8 VPGERLCSTE-DCAPGYGTFCRHGYIFASLAGYI-VKK--SDNGLMPIISVVRDTDSHLL 63
Query: 68 PTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRP 127
P G VVT ++ ++ K ++ +G+T L TFR +R+E++RATE D++E+YK +RP
Sbjct: 64 PDVGSVVTCKVTSINSRFAKVQIMYIGSTPLRNTFRGTIRKEDIRATEKDKVEVYKSFRP 123
Query: 128 GDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAAS 163
GDI++A+ + L ++ S Y LSTAENELGVV+A SEA +
Sbjct: 124 GDIVMAKVISLGDIQSNYLLSTAENELGVVVAHSEAGA 161
>gi|332212464|ref|XP_003255339.1| PREDICTED: exosome complex component CSL4 [Nomascus leucogenys]
Length = 195
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 105/163 (64%), Gaps = 8/163 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG + + +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLMKS---SENGALPVVSVVRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+ L +FR +R+E+VRATE ++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKYKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|313221861|emb|CBY38928.1| unnamed protein product [Oikopleura dioica]
gi|313236825|emb|CBY12077.1| unnamed protein product [Oikopleura dioica]
Length = 199
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 102/157 (64%), Gaps = 6/157 (3%)
Query: 7 CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVI 66
C+PG+R+ D + GRGTYVR+ ++Y++ G V V++NK++ VIEV K E
Sbjct: 8 CVPGERLGSTD-ECEAGRGTYVRKSFIYASRIGKV--KNTVDENKKI-VIEVIR-KDEPP 62
Query: 67 VPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYR 126
+P G +VTA+I+ V Q C+A + +V A S F+ L+RRE+VR TE DR+E+ KC+R
Sbjct: 63 LPQVGSIVTAKIVQVTQRQCRATIYAVDGIATSSPFKGLIRREDVRRTERDRVELSKCFR 122
Query: 127 PGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
P DI+ A+ + L + SY LST +ELGVV+A S A
Sbjct: 123 PNDIVFAKVMSLGDSQSYLLSTGGDELGVVLAKSRAG 159
>gi|198422997|ref|XP_002122042.1| PREDICTED: exosome complex component CSL4-like [Ciona intestinalis]
Length = 209
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 110/178 (61%), Gaps = 6/178 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
ICIPG+R+ + G+GTYVR G++++++AG SI K + + + +I V S +
Sbjct: 6 ICIPGERLGSSE-QYQPGKGTYVRHGFVFASIAG--SIKKESDKSGNLPLIHVQSIHTKQ 62
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+P G +V ++ + K +ISV + + FR ++R+E+VRAT D++E+YK +
Sbjct: 63 HIPQIGGIVICKMTQLTSAFAKCKIISVQGSNHTAAFRGIIRKEDVRATNRDKVEIYKSF 122
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE--AASLFRSSEKLTNDIEFLKQ 180
RPGDI++AR L L + Y LSTAENELGVV+ALSE A + + +++ I LKQ
Sbjct: 123 RPGDIVVARVLSLGDALCYLLSTAENELGVVVALSENGTAMIPLAHDQMQCPITLLKQ 180
>gi|221127674|ref|XP_002162040.1| PREDICTED: exosome complex component CSL4-like [Hydra
magnipapillata]
Length = 193
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 97/153 (63%), Gaps = 5/153 (3%)
Query: 8 IPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIV 67
+PG R+ + SD + G GTY+R G++YS L G V K +ED V+EV K + IV
Sbjct: 10 VPGDRLGSV-SDYIAGSGTYIRNGFIYSKLCGNVVAKKEIEDKL---VLEVIRNKLQNIV 65
Query: 68 PTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRP 127
P + T ++++ LCK ++SV +L F ++R+E+VRATE D+++MY+ + P
Sbjct: 66 PEVNSIATCKVISNNTRLCKVFILSVNGVSLHGKFIGIIRKEDVRATEKDKVKMYESFCP 125
Query: 128 GDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
GD+I+AR L L + SY L+TAENELGV+ A S
Sbjct: 126 GDVIVARILSLGDSQSYYLTTAENELGVIYASS 158
>gi|196009890|ref|XP_002114810.1| hypothetical protein TRIADDRAFT_50612 [Trichoplax adhaerens]
gi|190582872|gb|EDV22944.1| hypothetical protein TRIADDRAFT_50612 [Trichoplax adhaerens]
Length = 194
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 99/163 (60%), Gaps = 7/163 (4%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
+ NP IPGQR+ +D G GTYVRQ ++Y++L G I + ++ I++ +
Sbjct: 5 VGNP--VIPGQRLGSID-QFSAGLGTYVRQRHIYASLVGYKDI---ISQAGQLPKIQIKT 58
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE 120
+PT G VVTA+++ V C+ +I +G T L F+ +R+E++RATE D+++
Sbjct: 59 GNVSCNLPTIGKVVTAKVLNVNPRFCRVLIICIGTTPLKEPFKGTIRKEDIRATEKDKVD 118
Query: 121 MYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
MY C++PGD +LA + L + SY LSTA+NELGV+ A S A
Sbjct: 119 MYNCFKPGDAVLAEVISLGDPRSYYLSTAKNELGVIFAKSTAG 161
>gi|291415944|ref|XP_002724209.1| PREDICTED: exosomal core protein CSL4 [Oryctolagus cuniculus]
Length = 195
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 102/162 (62%), Gaps = 8/162 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+ L+ G GTY + GY++S+LAG ++ +N + V+ V
Sbjct: 3 PPVRYCIPGERLRNLEEG-SPGSGTYTQHGYIFSSLAGCLT---KTSENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L FR +R+E+V ATE D++E+
Sbjct: 59 AESQLLPDVGSIVTCKVSSINSCFAKVHILYVGSTPLKNFFRGTIRKEDVPATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEA 161
YK + PGDI+LA+ + L + S Y L+T ENELGVV+A SE+
Sbjct: 119 YKSFCPGDIVLAKVISLGDTQSNYLLTTGENELGVVVAHSES 160
>gi|302845465|ref|XP_002954271.1| hypothetical protein VOLCADRAFT_76178 [Volvox carteri f.
nagariensis]
gi|300260476|gb|EFJ44695.1| hypothetical protein VOLCADRAFT_76178 [Volvox carteri f.
nagariensis]
Length = 201
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 96/161 (59%), Gaps = 4/161 (2%)
Query: 5 PICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKE 64
P+C G R+ D G G YVR G+L++ + G I + + V+ V +
Sbjct: 10 PVCA-GDRLGTTDL-YEAGEGVYVRDGFLFAGIVGLQHIEQPAGRGAK-PVLGVVPRGIQ 66
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
+VP PGD+VT +I V Q A V+ VG ALS F+ ++R+++VRATEIDR+ MY C
Sbjct: 67 PLVPKPGDLVTVKISRVAQTAAMALVLCVGRQALSTEFKGVIRQQDVRATEIDRVVMYDC 126
Query: 125 YRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASL 164
+RPGDI+ A + L + SY LSTA+NELGVV A S AA +
Sbjct: 127 FRPGDIVRAEVVSLGDARSYYLSTAKNELGVVYARSAAAGV 167
>gi|488530671|ref|XP_004457101.1| PREDICTED: exosome complex component CSL4 [Dasypus novemcinctus]
Length = 147
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 96/149 (64%), Gaps = 8/149 (5%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ + +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLTKS---SENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEI 118
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTA 148
YK +RPGDI+LA+ + L + S Y L+TA
Sbjct: 119 YKSFRPGDIVLAKVISLGDAQSNYLLTTA 147
>gi|159485846|ref|XP_001700955.1| hypothetical protein CHLREDRAFT_187429 [Chlamydomonas reinhardtii]
gi|158281454|gb|EDP07209.1| predicted protein [Chlamydomonas reinhardtii]
Length = 198
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 4/159 (2%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+C+ G R+ D+ G G +VR G++ +++ G + D E I V+S
Sbjct: 10 VCV-GDRLGTTDT-YAAGEGVFVRDGFVIASVVGFQRLEPSA-DPGEKPTIHVASGDTRP 66
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+VP PGD+VT +I V Q A ++ VG AL F+ ++R+++VR+TEIDR+ +Y C+
Sbjct: 67 LVPKPGDIVTVKISRVAQTAAHALIMCVGRQALGTEFKGVIRQQDVRSTEIDRVVIYDCF 126
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
RPGDI+ A + L + SY LSTA+NELGVV A S A
Sbjct: 127 RPGDIVRAEVVSLGDARSYYLSTAKNELGVVYARSATAG 165
>gi|524917883|ref|XP_005063239.1| PREDICTED: exosome complex component CSL4 [Mesocricetus auratus]
Length = 228
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 105/193 (54%), Gaps = 35/193 (18%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ KE + S+
Sbjct: 3 PPVRYCIPGERLCNLEEGSPG-SGTYTRHGYIFSSLAGCLTKTSENGAVKEAATQSAFSF 61
Query: 62 KKEV----------------------IVPTPG-DVVTAR-------IMAVQQHLCKAHVI 91
++ + + +PG D R + ++ K H++
Sbjct: 62 RQPLGSGPWHRHGGRVSGASAAERFDLSISPGWDPNAVRKHSRPTPVSSINSRFAKVHIL 121
Query: 92 SVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHS-YQLSTAE 149
VG+T L FR +R+E++RATE D++E+YK +RPGDI+LA+ + L + S Y L+TAE
Sbjct: 122 YVGSTPLKNAFRGTIRKEDIRATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLLTTAE 181
Query: 150 NELGVVIALSEAA 162
NELGVV+A SE+
Sbjct: 182 NELGVVVAHSESG 194
>gi|449453260|ref|XP_004144376.1| PREDICTED: exosome complex component CSL4-like [Cucumis sativus]
gi|449515303|ref|XP_004164689.1| PREDICTED: exosome complex component CSL4-like [Cucumis sativus]
Length = 196
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 94/157 (59%), Gaps = 3/157 (1%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEV-SVIEVSSYKKEVIV 67
PG+ + SD GRG YV +Y++L+G I D+ ++ S +EV+ +K V
Sbjct: 13 PGEVLGNF-SDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTVEVTGHKAHGAV 71
Query: 68 PTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRP 127
P PG +V R+ V + A ++ VG ++ F ++R+++VRATEID+++M+ +RP
Sbjct: 72 PAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEIDKVDMHLSFRP 131
Query: 128 GDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
GDI+ A L L + +Y LSTA+NELGVV A S A +
Sbjct: 132 GDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGA 168
>gi|344243180|gb|EGV99283.1| RRP12-like protein [Cricetulus griseus]
Length = 1390
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 101/177 (57%), Gaps = 23/177 (12%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLT---KTSENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G VVT ++ ++ K H++ VG+T L FR +R+E++RATE D+I +
Sbjct: 59 TESQLLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKISL 118
Query: 122 YKCYRPGDIILARLPLKELHSYQLSTAENELGVVIALSEA--ASLFRSSEKLTNDIE 176
GD +Y L+TAENELGVV+A SE+ + L + KL N+++
Sbjct: 119 ------GD---------AQSNYLLTTAENELGVVVAHSESGKSDLTVDAVKLHNELQ 160
>gi|397510699|ref|XP_003825729.1| PREDICTED: exosome complex component CSL4 [Pan paniscus]
Length = 184
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 96/163 (58%), Gaps = 19/163 (11%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG + + +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLMKS---SENGALPVVSVVRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+ L +FR + R+E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTI-----------RVEI 107
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 108 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 150
>gi|168050507|ref|XP_001777700.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670920|gb|EDQ57480.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 192
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 23 GRGTYVRQGYLYSTLAG---TVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIM 79
G GTY G + S++ G V + D + +IEVS K++ VP PG VTA+I
Sbjct: 23 GPGTYAWGGNVVSSVVGLQRVVPPSPDAPDQR--PIIEVSREKEQGAVPGPGAQVTAKIR 80
Query: 80 AVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLK 138
VQ A ++ VG A+ FR L+R+++VRATEID+++M+ +RPGDII A L L
Sbjct: 81 KVQPRQAIADILCVGTRAVKEKFRGLVRQQDVRATEIDKVDMHLSFRPGDIIRAEVLSLG 140
Query: 139 ELHSYQLSTAENELGVVIALSEAAS 163
+ +Y LSTA+NELGVV A S+A +
Sbjct: 141 DARAYFLSTAKNELGVVSATSDAGA 165
>gi|281211015|gb|EFA85181.1| 3'-5' exoribonuclease [Polysphondylium pallidum PN500]
Length = 238
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 100/182 (54%), Gaps = 21/182 (11%)
Query: 2 SNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVS------- 54
+N I PGQ++ + D++ + GTY +G +YS++ G K+ +KE S
Sbjct: 3 NNITIVTPGQKLSR-DNEYIASEGTYYYKGSIYSSVLGFRHFVKNNITSKEESDDIVDNS 61
Query: 55 ------------VIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTF 102
I V K +VP G VVT +++ + L ++ VG AL TF
Sbjct: 62 NINNNNNNSNKDYIVVLKEKDPGVVPEIGSVVTVQVLRINPRLASVAILCVGTKALKETF 121
Query: 103 RALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEA 161
++R ++VRATEID++E+YK +RPGDI++A + L + SY LSTA+NELGVV A S A
Sbjct: 122 NGIIRVQDVRATEIDKVEIYKSFRPGDIVIAEVISLGDSRSYFLSTAKNELGVVFAQSVA 181
Query: 162 AS 163
+
Sbjct: 182 GA 183
>gi|148709920|gb|EDL41866.1| exosome component 1, isoform CRA_a [Mus musculus]
Length = 182
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 91/161 (56%), Gaps = 21/161 (13%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG + +N V V+ V
Sbjct: 7 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCL---MKTSENGAVPVVSVMRE 62
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G VVT ++ ++ K H++ VG+T L FR +R+E++RATE D+I +
Sbjct: 63 TESQLLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKISL 122
Query: 122 YKCYRPGDIILARLPLKELHSYQLSTAENELGVVIALSEAA 162
GD +Y L+TAENELGVV+A SE+
Sbjct: 123 ------GD---------AQSNYLLTTAENELGVVVAHSESG 148
>gi|149040178|gb|EDL94216.1| rCG57589, isoform CRA_b [Rattus norvegicus]
Length = 178
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 92/161 (57%), Gaps = 21/161 (13%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLT---KTSENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G VVT ++ ++ K H++ VG+T L FR +R+E++RATE D+I +
Sbjct: 59 TESQLLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKISL 118
Query: 122 YKCYRPGDIILARLPLKELHSYQLSTAENELGVVIALSEAA 162
GD +Y L+TAENELGVV+A SE+
Sbjct: 119 ------GD---------AQSNYLLTTAENELGVVVAHSESG 144
>gi|470267746|ref|XP_004362150.1| 3'-5' exoribonuclease [Dictyostelium fasciculatum]
gi|328875935|gb|EGG24299.1| 3'-5' exoribonuclease [Dictyostelium fasciculatum]
Length = 246
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 98/185 (52%), Gaps = 34/185 (18%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSI---------------------- 43
I PGQ++C+ D++ + GTYV +G +YS++ G
Sbjct: 4 IVTPGQKLCK-DTEYISSEGTYVHKGSIYSSVLGFSHTIKRNINTDNNNETTTTSSSGSS 62
Query: 44 --------NKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGN 95
N ED ++ I V K+ IVP G+VVT +++ + L ++ VG
Sbjct: 63 SSIPSEYNNSTSEDKRDY--IVVLKEKEPGIVPEIGNVVTVQVLRINPRLASCAILCVGT 120
Query: 96 TALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGV 154
AL TF ++R ++VRATEID++E+YK +RPGDI+ A + L + SY LSTA+NELGV
Sbjct: 121 KALKETFNGVIRVQDVRATEIDKVEIYKSFRPGDIVSAEVISLGDSRSYYLSTAKNELGV 180
Query: 155 VIALS 159
V A S
Sbjct: 181 VFAQS 185
>gi|302790375|ref|XP_002976955.1| hypothetical protein SELMODRAFT_175887 [Selaginella moellendorffii]
gi|300155433|gb|EFJ22065.1| hypothetical protein SELMODRAFT_175887 [Selaginella moellendorffii]
Length = 197
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 96/161 (59%), Gaps = 11/161 (6%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVS-----VIEVSSYKK 63
PG+ + L S+ GRG+Y G +Y++L G +H+ + K+ S IE+ K+
Sbjct: 11 PGE-LLGLASEFNAGRGSYCHDGKIYASLVGI----RHLIEAKQGSDDLRPTIEIRREKE 65
Query: 64 EVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYK 123
VP G VTA+I VQ + A ++ VG A+ F ++R+++VR TEID+++M+
Sbjct: 66 RDAVPEAGSTVTAKITKVQARMASADIVCVGPRAVKEKFTGIVRQQDVRLTEIDKVDMHS 125
Query: 124 CYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
+RPGDII A + L + +Y LSTA+NELGVV A+S A +
Sbjct: 126 SFRPGDIIRAEVISLGDSRAYYLSTAKNELGVVSAVSVAGA 166
>gi|460383605|ref|XP_004237511.1| PREDICTED: exosome complex component CSL4-like [Solanum
lycopersicum]
Length = 200
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 95/162 (58%), Gaps = 5/162 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVR--QGYLYSTLAGTVS-INKHVEDNKEVSVIEVSSYK 62
+ PGQ + + S + G+G YV G +Y++L G S I H + + S +EV+ +K
Sbjct: 12 LVTPGQVLGKA-SQLKAGKGAYVSTENGTVYASLTGFRSLIPPHSDAVDQRSTVEVTGHK 70
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
VP PG VV AR+ V A ++ V + ++ F ++R+++VRATEID+++M+
Sbjct: 71 AHGAVPKPGSVVFARVTKVMARTASADIVCVDSKSVREKFTGIIRQQDVRATEIDKVDMH 130
Query: 123 KCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
+RPGDII A L L + +Y LSTA+NELGVV A S A
Sbjct: 131 LSFRPGDIIRALVLSLGDARAYYLSTAKNELGVVSAESAAGG 172
>gi|302797873|ref|XP_002980697.1| hypothetical protein SELMODRAFT_178307 [Selaginella moellendorffii]
gi|300151703|gb|EFJ18348.1| hypothetical protein SELMODRAFT_178307 [Selaginella moellendorffii]
Length = 205
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 95/160 (59%), Gaps = 11/160 (6%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVS-----VIEVSSYKK 63
PG+ + L S+ GRG+Y G +Y++L G +H+ + K+ S IE+ K+
Sbjct: 11 PGE-LLGLASEFNAGRGSYCHDGKIYASLVGI----RHLIEAKQGSDDLRPTIEIRREKE 65
Query: 64 EVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYK 123
VP G VTA+I VQ + A ++ VG A+ F ++R+++VR TEID+++M+
Sbjct: 66 RDAVPEAGSTVTAKITKVQARMASADIVCVGPRAVKEKFTGIVRQQDVRLTEIDKVDMHS 125
Query: 124 CYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
+RPGDII A + L + +Y LSTA+NELGVV A+S A
Sbjct: 126 SFRPGDIIRAEVISLGDSRAYYLSTAKNELGVVSAVSVAG 165
>gi|384501277|gb|EIE91768.1| hypothetical protein RO3G_16479 [Rhizopus delemar RA 99-880]
Length = 189
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 92/155 (59%), Gaps = 4/155 (2%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVP 68
PGQR+ +D + G GTY R G LY+++ G I++ N+++ I VS K++ VP
Sbjct: 10 PGQRL-GYAADYIQGPGTYERDGLLYASVVGHKYIDQ--SKNEQLPTIRVSKEKEQSAVP 66
Query: 69 TPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPG 128
G V+T +++ V H ++ VG T F ++R ++VRA E D++++Y +RPG
Sbjct: 67 EVGSVITGKVIRVAPHQATIAIMVVGETPCKEDFMGVIRTQDVRAAEKDKVKIYNSFRPG 126
Query: 129 DIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
DI+ A + L + SY LSTA+NELGV+ A S A
Sbjct: 127 DIVKADVISLGDARSYVLSTAKNELGVIFATSVAG 161
>gi|297805862|ref|XP_002870815.1| hypothetical protein ARALYDRAFT_494089 [Arabidopsis lyrata subsp.
lyrata]
gi|297316651|gb|EFH47074.1| hypothetical protein ARALYDRAFT_494089 [Arabidopsis lyrata subsp.
lyrata]
Length = 191
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 95/156 (60%), Gaps = 3/156 (1%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDN-KEVSVIEVSSYKKE 64
+ PG I + ++ G+G YV +Y++L GT I + ++ + +V+EV+ +K
Sbjct: 5 LVTPGDVIGKA-TEFKAGKGAYVNDTTIYASLTGTRRIVSPLPESLDQRAVVEVTGHKAH 63
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
+P PG VV AR+ V + ++ VG+ A+ F ++R+++VRATEID+++M++
Sbjct: 64 GPIPEPGSVVIARVTKVMARMAAVDILCVGSKAVRENFAGVIRQQDVRATEIDKVDMHQS 123
Query: 125 YRPGDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
+R GDI+ A L L + +Y LSTA+NELGVV A S
Sbjct: 124 FRAGDIVRAMVLSLGDARAYYLSTAKNELGVVSAES 159
>gi|357159969|ref|XP_003578616.1| PREDICTED: exosome complex component CSL4-like [Brachypodium
distachyon]
Length = 199
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 100/186 (53%), Gaps = 9/186 (4%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEV-SVIEVSSYKKE 64
+ PG+ + S V G G Y + +++ G I D+ + S +EV +K
Sbjct: 14 VVTPGE-LLGTSSSFVAGHGAYADGRSVRASVTGHRRIVPPSPDSPDKRSTVEVVGHKAH 72
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
VP PG VV AR+ V + A ++ V + A+ F ++R+++VRATEID+++MY+
Sbjct: 73 GAVPQPGSVVIARVTKVMARVASADIMCVDSKAVKEKFTGMIRQQDVRATEIDKVDMYQS 132
Query: 125 YRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLFRSSE------KLTNDIEF 177
YRPGDI+ A L L + +Y LSTA+NELGVV A S A + + +LT IE
Sbjct: 133 YRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAQSIAGGMLVPTSWTEMQCELTGQIEQ 192
Query: 178 LKQEKL 183
K K+
Sbjct: 193 RKVAKV 198
>gi|312069234|ref|XP_003137587.1| hypothetical protein LOAG_02001 [Loa loa]
gi|307767251|gb|EFO26485.1| hypothetical protein LOAG_02001 [Loa loa]
Length = 215
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 5/161 (3%)
Query: 8 IPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEV---SSYKKE 64
IPG R+ + + G GTY G++Y++LAGT+ + VE +KE ++EV S +K
Sbjct: 24 IPGDRLFPISEQLKAGIGTYELFGHIYASLAGTLHMYTTVERDKETKIVEVRRESEKEKR 83
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
I+P G +VTA++ + Q K + V + LS F +LR+E++ E ++I++ +C
Sbjct: 84 HIMPYVGCIVTAKVQNIGQRFAKCAIHCVECSVLSHEFNGILRKEDIMPIEKEKIKLEQC 143
Query: 125 YRPGDIILARLP--LKELHSYQLSTAENELGVVIALSEAAS 163
PGD+ILAR+ HSY LST E+ELGVV + +
Sbjct: 144 VHPGDVILARVIGFGDNQHSYLLSTVEDELGVVSGIGDFGG 184
>gi|502117924|ref|XP_004496013.1| PREDICTED: uncharacterized protein LOC101510142 [Cicer arietinum]
Length = 1056
Score = 103 bits (258), Expect = 8e-20, Method: Composition-based stats.
Identities = 59/149 (39%), Positives = 89/149 (59%), Gaps = 4/149 (2%)
Query: 19 DIVGGRGTYV--RQGYLYSTLAGTV-SINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVT 75
D+ GRGTY+ +Y++L G +I + + VIEV+ +K VP PG VV
Sbjct: 19 DVKAGRGTYLALHNNTVYASLTGLRHTIPPPSDSPDQRPVIEVTGHKAHGPVPEPGSVVI 78
Query: 76 ARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR- 134
AR+ V A ++ VG ++ F ++R+++VRATEID+++M+ +RPGDI+ A
Sbjct: 79 ARVTKVMAKTASADIMCVGQKSVREKFTGIIRQQDVRATEIDKVDMHLSFRPGDIVKALV 138
Query: 135 LPLKELHSYQLSTAENELGVVIALSEAAS 163
L L + +Y LSTA+NELGVV A S A +
Sbjct: 139 LSLGDARAYFLSTAKNELGVVSAESTAGA 167
>gi|390345698|ref|XP_784560.2| PREDICTED: exosome complex component CSL4-like [Strongylocentrotus
purpuratus]
Length = 162
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 84/122 (68%), Gaps = 3/122 (2%)
Query: 44 NKHVEDNKEVSVIEVSSYKKEV--IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRT 101
+ HV+ + + + ++ ++E+ VP +VT +++++ C+ ++SV + L+ T
Sbjct: 5 SDHVKHHNRICLPALTVLQQEIQITVPRQKSLVTCKVVSITSKFCRCDILSVESVPLTET 64
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
FR ++R+E++RATE D++E+YK +RPGDI+LAR L L + SY L+TAENELGVV+A SE
Sbjct: 65 FRGMIRKEDIRATEKDKVEVYKSFRPGDIVLARVLSLGDAQSYLLTTAENELGVVLAKSE 124
Query: 161 AA 162
A
Sbjct: 125 AG 126
>gi|511010261|gb|EPB91486.1| hypothetical protein HMPREF1544_01617 [Mucor circinelloides f.
circinelloides 1006PhL]
Length = 190
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 92/156 (58%), Gaps = 4/156 (2%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVP 68
PGQR+ +D G GTY R G LY+++ G I+ +D ++ V+ VS K++ VP
Sbjct: 10 PGQRL-GYAADYQQGAGTYERDGLLYASVVGQRYIDPAKDD--QLPVMRVSREKEQSAVP 66
Query: 69 TPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPG 128
G V+T +++ V H ++ VG+ F ++R ++VRA E D++++Y +RPG
Sbjct: 67 EVGSVITGKVIRVAPHQAVIAIMVVGDIPCKEDFMGVIRTQDVRAAEKDKVKIYNSFRPG 126
Query: 129 DIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
DII A + L + SY LSTA+NELGV+ A S A +
Sbjct: 127 DIIKAEVISLGDARSYILSTAKNELGVIFATSVAGA 162
>gi|508718923|gb|EOY10820.1| Nucleic acid-binding isoform 3 [Theobroma cacao]
Length = 221
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 5/158 (3%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGY--LYSTLAGTVSINKHVEDNKEV-SVIEVSSYKKEV 65
PG+ + + +++ G+G YV Q +Y++L G I D+ + +EV+ +K
Sbjct: 9 PGEMLGRA-TELKAGKGAYVVQHNKNIYASLTGFRRIQSPPPDSPDQRPTVEVTGHKAHG 67
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
VP PG VV AR+ V + A ++ VG ++ F ++R+++VRATEID+++M+ +
Sbjct: 68 PVPEPGSVVIARVTKVMARIASADIMCVGPKSVREKFSGIIRQQDVRATEIDKVDMHLSF 127
Query: 126 RPGDIILA-RLPLKELHSYQLSTAENELGVVIALSEAA 162
RPGDI+ A L L + +Y LSTA+NELGVV A S AA
Sbjct: 128 RPGDIVRAVVLSLGDARAYYLSTAKNELGVVSAESSAA 165
>gi|470138074|ref|XP_004304784.1| PREDICTED: uncharacterized protein LOC101298049 [Fragaria vesca
subsp. vesca]
Length = 2285
Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats.
Identities = 57/158 (36%), Positives = 94/158 (59%), Gaps = 5/158 (3%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYL--YSTLAGTVSINKHVEDN-KEVSVIEVSSYKKEV 65
PG+++ + S+ GRG YV L Y++L G I D+ + V+EV+ +K
Sbjct: 10 PGEKLGRA-SEFKAGRGAYVSPDNLTVYASLTGLRRILSPPPDSPDQRPVVEVTGHKAHG 68
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+P PG +V AR+ V + A ++ +G ++ F ++R +++RATEID+++M++ +
Sbjct: 69 AIPEPGSIVIARVTKVMARMASADIMCLGTKSVRENFTGIIRLQDIRATEIDKVDMHQSF 128
Query: 126 RPGDIILA-RLPLKELHSYQLSTAENELGVVIALSEAA 162
RPGDI+ A L L + +Y LSTA+NELGV+ A S A
Sbjct: 129 RPGDIVRAIVLSLGDARAYFLSTAKNELGVISAQSAAG 166
>gi|290992701|ref|XP_002678972.1| predicted protein [Naegleria gruberi]
gi|284092587|gb|EFC46228.1| predicted protein [Naegleria gruberi]
Length = 216
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 99/173 (57%), Gaps = 22/173 (12%)
Query: 8 IPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVI--------EVS 59
+PGQRI Q D+ GRGTYV+ +++++ G+V I+ H + ++ EV+
Sbjct: 14 VPGQRIGQTDT-YQSGRGTYVKDNRIHASVVGSVKISNHADIDESTPSSSNNSSSTSEVA 72
Query: 60 SY---------KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRA---LLR 107
S +E IVP VVTA+++ + K ++ V ++++ A LLR
Sbjct: 73 SLPYIHVIQENNQETIVPNILSVVTAKVIKTTKSFAKVDILCVDGKPVTKSGSAISGLLR 132
Query: 108 RENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
+++RATEID++ +Y+C RPGDIILA + L + SY +STA NELGV+ A S
Sbjct: 133 VQDIRATEIDKVVLYECLRPGDIILAEVISLGDSRSYYISTARNELGVIYATS 185
>gi|508718921|gb|EOY10818.1| Nucleic acid-binding, OB-fold-like protein isoform 1 [Theobroma
cacao]
Length = 194
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGY--LYSTLAGTVSINKHVEDNKEV-SVIEVSSYKKEV 65
PG+ + + +++ G+G YV Q +Y++L G I D+ + +EV+ +K
Sbjct: 9 PGEMLGRA-TELKAGKGAYVVQHNKNIYASLTGFRRIQSPPPDSPDQRPTVEVTGHKAHG 67
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
VP PG VV AR+ V + A ++ VG ++ F ++R+++VRATEID+++M+ +
Sbjct: 68 PVPEPGSVVIARVTKVMARIASADIMCVGPKSVREKFSGIIRQQDVRATEIDKVDMHLSF 127
Query: 126 RPGDIILA-RLPLKELHSYQLSTAENELGVVIALSEAAS 163
RPGDI+ A L L + +Y LSTA+NELGVV A S A +
Sbjct: 128 RPGDIVRAVVLSLGDARAYYLSTAKNELGVVSAESSAGA 166
>gi|514719919|ref|XP_004954356.1| PREDICTED: exosome complex component CSL4-like [Setaria italica]
Length = 200
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 86/150 (57%), Gaps = 6/150 (4%)
Query: 20 IVGGRGTYVRQGYLYSTLAG---TVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTA 76
+V GRG Y + +++ G V +D + S +EV +K VP PG VV A
Sbjct: 28 LVAGRGAYADGRSVRASVTGHRRIVPPAPGSDDQR--STVEVVGHKAHGAVPQPGSVVIA 85
Query: 77 RIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILA-RL 135
R+ V + A ++ V + A+ F L+R+++VRATEID+++MY+ YRPGDI+ A L
Sbjct: 86 RVTKVMPRMANADIMCVDSKAIKEKFTGLIRQQDVRATEIDKVDMYQSYRPGDIVRAVVL 145
Query: 136 PLKELHSYQLSTAENELGVVIALSEAASLF 165
L + +Y LSTA+NELGVV A S A
Sbjct: 146 SLGDARAYYLSTAKNELGVVSAQSIAGGTL 175
>gi|508718922|gb|EOY10819.1| Nucleic acid-binding, OB-fold-like protein isoform 2 [Theobroma
cacao]
Length = 192
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGY--LYSTLAGTVSINKHVEDNKEV-SVIEVSSYKKEV 65
PG+ + + +++ G+G YV Q +Y++L G I D+ + +EV+ +K
Sbjct: 9 PGEMLGRA-TELKAGKGAYVVQHNKNIYASLTGFRRIQSPPPDSPDQRPTVEVTGHKAHG 67
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
VP PG VV AR+ V + A ++ VG ++ F ++R+++VRATEID+++M+ +
Sbjct: 68 PVPEPGSVVIARVTKVMARIASADIMCVGPKSVREKFSGIIRQQDVRATEIDKVDMHLSF 127
Query: 126 RPGDIILA-RLPLKELHSYQLSTAENELGVVIALSEAAS 163
RPGDI+ A L L + +Y LSTA+NELGVV A S A +
Sbjct: 128 RPGDIVRAVVLSLGDARAYYLSTAKNELGVVSAESSAGA 166
>gi|508718924|gb|EOY10821.1| Nucleic acid-binding, OB-fold-like protein isoform 4 [Theobroma
cacao]
Length = 169
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 95/161 (59%), Gaps = 5/161 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGY--LYSTLAGTVSINKHVEDNKEV-SVIEVSSYK 62
+ PG+ + + +++ G+G YV Q +Y++L G I D+ + +EV+ +K
Sbjct: 6 MVTPGEMLGRA-TELKAGKGAYVVQHNKNIYASLTGFRRIQSPPPDSPDQRPTVEVTGHK 64
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
VP PG VV AR+ V + A ++ VG ++ F ++R+++VRATEID+++M+
Sbjct: 65 AHGPVPEPGSVVIARVTKVMARIASADIMCVGPKSVREKFSGIIRQQDVRATEIDKVDMH 124
Query: 123 KCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSEAA 162
+RPGDI+ A L L + +Y LSTA+NELGVV A S A
Sbjct: 125 LSFRPGDIVRAVVLSLGDARAYYLSTAKNELGVVSAESSAG 165
>gi|170594968|ref|XP_001902194.1| 3'-5' exoribonuclease CSL4 homolog [Brugia malayi]
gi|158590258|gb|EDP28956.1| 3'-5' exoribonuclease CSL4 homolog, putative [Brugia malayi]
Length = 216
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 93/158 (58%), Gaps = 5/158 (3%)
Query: 8 IPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEV---SSYKKE 64
IPG R+ + + G GTY G++Y++LAGT+ + VE +KE ++EV S +K
Sbjct: 25 IPGDRLFPISEQLKAGIGTYELFGHIYASLAGTMHMYTTVERDKETKIVEVRRESEKEKR 84
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
++P G +VTA++ + Q K + V + LS F +LR+E++ E +++++ +C
Sbjct: 85 HVMPYVGCIVTAKVQNIGQRFAKCTIHCVECSVLSHEFNGVLRKEDIMPIEKEKVKLEQC 144
Query: 125 YRPGDIILARL--PLKELHSYQLSTAENELGVVIALSE 160
PGD+ILAR+ HSY LST E+ELGVV + +
Sbjct: 145 IHPGDVILARVIGFGDNQHSYLLSTVEDELGVVSGIGD 182
>gi|384251760|gb|EIE25237.1| hypothetical protein COCSUDRAFT_52805 [Coccomyxa subellipsoidea
C-169]
Length = 190
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 96/158 (60%), Gaps = 8/158 (5%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAG---TVSINKHVEDNKEVSVIEVSSYK 62
+C PG+R+ + ++ V GTYV+ ++ ++L G + + + ED + V +EV
Sbjct: 6 VC-PGERLFKA-AEYVASSGTYVKGDHICASLVGIPQSFAGSSSAEDKRPV--VEVLRSG 61
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
VP G++V A++ V L A ++ V L+ +F ++R+++VRATEID++EMY
Sbjct: 62 SRAKVPETGNIVIAKVNKVNPRLASASLLCVNTQPLTDSFSGIIRQQDVRATEIDKVEMY 121
Query: 123 KCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
C+RPGD++ A + L + SY LSTA+N+LGVV A S
Sbjct: 122 SCFRPGDLVRAEVISLGDSRSYYLSTAKNDLGVVYAKS 159
>gi|432098414|gb|ELK28213.1| Exosome complex component CSL4 [Myotis davidii]
Length = 197
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 106/206 (51%), Gaps = 27/206 (13%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ K E N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEGSPGS-GTYTRHGYIFSSLAGCMT--KSCE-NGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E++RATE D++E+
Sbjct: 59 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDLRATEKDKVEI 118
Query: 122 YKCYRP-------GDIILARLPLKEL--HSYQLSTAENELGVVIALSEAASLFRSSEKLT 172
YK +RP I R P + ++ S+A G+ + LT
Sbjct: 119 YKSFRPDCGLEAEPRWIFCRKPAPDPSRRRWKWSSAGGWRGL------------GAGPLT 166
Query: 173 NDIEFLKQEKLKLYEELSSSQKENEI 198
+ L Q +L+ ++++ N +
Sbjct: 167 GRVSRLLQSRLQGAPDVAARGWANAV 192
>gi|225430615|ref|XP_002266663.1| PREDICTED: exosome complex component CSL4 [Vitis vinifera]
gi|296085148|emb|CBI28643.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 94/162 (58%), Gaps = 5/162 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYV--RQGYLYSTLAGTVS-INKHVEDNKEVSVIEVSSYK 62
+ PG+ + + S + GRG Y + G +Y++L G S I + + +EV+ +
Sbjct: 10 LVTPGEVLGK-GSQLKAGRGAYFLPQNGTVYASLTGRRSLIPPSPLSSDQRPTVEVTGHS 68
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
+P PG +V AR+ V + A ++ VG ++ F ++R+++VRATEID+++M+
Sbjct: 69 AHGAIPEPGSIVIARVTKVMARMASADIMCVGPKSVREKFTGIIRQQDVRATEIDKVDMH 128
Query: 123 KCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
+RPGDI+ A L L + +Y LSTA+NELGVV A S A +
Sbjct: 129 SSFRPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESAAGA 170
>gi|294460089|gb|ADE75627.1| unknown [Picea sitchensis]
Length = 193
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 99/180 (55%), Gaps = 15/180 (8%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQG--YLYSTLAGT---VSINKHVEDNKEVSVIEVSSYKK 63
PG+ I D + G GTY+ +Y+ G + + + DN+ +EV K+
Sbjct: 9 PGE-IVGKSYDYIAGPGTYLNPSNNTIYACAVGLKRLIPASPNAGDNR--PTVEVVKEKE 65
Query: 64 EVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYK 123
VP PG +VTAR+ V L ++I VG A+ F +R+++VRATEID+++MY
Sbjct: 66 HGAVPEPGAIVTARVTKVMVRLASVNIICVGMRAVKEKFTGTVRQQDVRATEIDKVDMYT 125
Query: 124 CYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEA-ASLFRSSE-----KLTNDIE 176
+RPGDII A L L + +Y LSTA+NELGVV A S A A++ S LTN IE
Sbjct: 126 SFRPGDIIRAEVLSLGDARAYYLSTAKNELGVVSAESIAGATMIPISWTEMQCPLTNQIE 185
>gi|226531832|ref|NP_001148354.1| 3-5 exoribonuclease CSL4 [Zea mays]
gi|195618352|gb|ACG31006.1| 3-5 exoribonuclease CSL4 [Zea mays]
gi|223975657|gb|ACN32016.1| unknown [Zea mays]
gi|413939469|gb|AFW74020.1| 3-5 exoribonuclease CSL4 [Zea mays]
Length = 199
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 84/148 (56%), Gaps = 2/148 (1%)
Query: 20 IVGGRGTYVRQGYLYSTLAGTVSINKHVE-DNKEVSVIEVSSYKKEVIVPTPGDVVTARI 78
+ GRG Y + +++ G I + + S +EV +K VP PG VV AR+
Sbjct: 27 LAAGRGAYADGRSVRASVTGRRRIVPPAPGSDDQRSTVEVVGHKAHGAVPQPGSVVIARV 86
Query: 79 MAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPL 137
V + A ++ V + A+ F ++R+++VRATEID+++MY+ YRPGDI+ A L L
Sbjct: 87 TKVMARMASADIMCVDSKAIREKFTGMIRQQDVRATEIDKVDMYQSYRPGDIVKAMVLSL 146
Query: 138 KELHSYQLSTAENELGVVIALSEAASLF 165
+ +Y LSTA+NELGVV A S A
Sbjct: 147 GDARAYYLSTAKNELGVVSAQSIAGGTL 174
>gi|426365775|ref|XP_004049942.1| PREDICTED: exosome complex component CSL4-like [Gorilla gorilla
gorilla]
Length = 196
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 83/135 (61%), Gaps = 6/135 (4%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG + K+ E+ + Y
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGC--LVKNSENGALSPAVSCILY 59
Query: 62 KKEVIVPTPGDVV-TARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE 120
+ + + + D+ ++ ++ K H++ VG+ L +FR +R+E+VRATE D++E
Sbjct: 60 ESDNCLYSDADLFFIPQVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVE 119
Query: 121 MYKCYRPGDIILARL 135
+YK +RPGDI+LA++
Sbjct: 120 IYKSFRPGDIVLAKV 134
>gi|328770331|gb|EGF80373.1| hypothetical protein BATDEDRAFT_88821 [Batrachochytrium
dendrobatidis JAM81]
Length = 189
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 93/161 (57%), Gaps = 11/161 (6%)
Query: 8 IPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVED-----NKEVSVIEVSSYK 62
+PGQR+ L +D GTY++ G++Y+++ G NKH+ N + S+ +
Sbjct: 5 LPGQRL-GLAADTNASTGTYIKDGFVYASVMG----NKHITPSIDPLNTKPSLSVFKDKQ 59
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
VP G ++ ++ + +++ + +T S F+ ++R ++VRATE D++++Y
Sbjct: 60 ANSGVPEIGSLIIGKVTRINPRFASVNIMVISSTPCSEVFQGIIRVQDVRATEKDKVQIY 119
Query: 123 KCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
+ +RPGDI+ A+ L L + SY LSTA+NELGVV A S A
Sbjct: 120 RSFRPGDIVRAKVLSLGDARSYHLSTAQNELGVVFAQSLAG 160
>gi|357441291|ref|XP_003590923.1| Ammonium transporter [Medicago truncatula]
gi|355479971|gb|AES61174.1| Ammonium transporter [Medicago truncatula]
Length = 1109
Score = 100 bits (250), Expect = 6e-19, Method: Composition-based stats.
Identities = 58/159 (36%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 9 PGQRICQLDSDIVGGRGTYV--RQGYLYSTLAG-TVSINKHVEDNKEVSVIEVSSYKKEV 65
PG+ I + D+ GRGTY +Y++L G +I + + ++EV+ +K
Sbjct: 10 PGEVIGK-THDVKAGRGTYTSTHNNTVYASLTGFRHTIPPASDSPDQRPIVEVTGHKAHG 68
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
VP PG VV R+ V + +A ++ VG ++ F ++R+++VRATEID+++M+ +
Sbjct: 69 PVPEPGSVVIVRVTKVMTKIAEADIMCVGQKSVREKFTGVIRQQDVRATEIDKVDMHLSF 128
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
RPGDI+ A L L +Y L+TA+NELGVV A S A +
Sbjct: 129 RPGDIVKALVLSLGNARAYFLTTAKNELGVVSAESTAGA 167
>gi|224125764|ref|XP_002319669.1| predicted protein [Populus trichocarpa]
gi|118483759|gb|ABK93772.1| unknown [Populus trichocarpa]
gi|222858045|gb|EEE95592.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 97/168 (57%), Gaps = 13/168 (7%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQ------GYLYSTLAG---TVSINKHVEDNKEVSVI 56
+ PG+ + + +++ G+G Y+ Y++S+L G T+S + D + +
Sbjct: 7 MATPGEVLGKA-TELKAGKGAYIGSYRDTDIQYVFSSLTGLRRTLSPSPDSPDQRPT--V 63
Query: 57 EVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEI 116
EV+ +K VP PG VV AR+ V A ++ VG ++ F ++R+++VRATEI
Sbjct: 64 EVTGHKAHGAVPEPGSVVIARVTKVMAKTASADIMCVGPKSVQEKFTGIIRQQDVRATEI 123
Query: 117 DRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
D+++M+ +RPGDI+ A L L + +Y LSTA+NELGVV A S A +
Sbjct: 124 DKVDMHLSFRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAESAAGA 171
>gi|42568189|ref|NP_568559.2| nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]
gi|124301132|gb|ABN04818.1| At5g38890 [Arabidopsis thaliana]
gi|222423301|dbj|BAH19626.1| AT5G38890 [Arabidopsis thaliana]
gi|332006986|gb|AED94369.1| nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]
Length = 191
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 93/156 (59%), Gaps = 3/156 (1%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDN-KEVSVIEVSSYKKEVIV 67
PG I + ++ G+G YV +Y++L GT I + ++ + +++EV+ +K +
Sbjct: 8 PGDVIGKA-TEFKAGKGAYVNDATIYASLTGTCRIVSPLPESIDQRAIVEVTGHKAHGPI 66
Query: 68 PTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRP 127
P G VV AR+ V + ++ VG+ A+ F ++R+++VRATEID+++M++ +
Sbjct: 67 PETGSVVIARVTKVMTKMAAVDILCVGSKAVRENFAGVIRQQDVRATEIDKVDMHQSFHA 126
Query: 128 GDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
GDI+ A L L + +Y LSTA+NELGVV A S A
Sbjct: 127 GDIVRAMVLSLGDARAYYLSTAKNELGVVSAESAAG 162
>gi|326522694|dbj|BAJ88393.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 200
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 13/188 (6%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGT---VSINKHVEDNKEVSVIEVSSYK 62
+ PG+ + S + GRG Y + +++ G V D + S +EV +K
Sbjct: 15 VVTPGE-LLGPSSYLAAGRGAYAEGRSVRASVTGRRRFVPPAPGSSDQR--STVEVVGHK 71
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
VP PG +V AR+ V + A ++ V + A+ F ++R+++VRATEID+++MY
Sbjct: 72 AHGAVPQPGSIVIARVTKVMARMASADIMCVDSKAVKEKFTGMIRQQDVRATEIDKVDMY 131
Query: 123 KCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLFRSSE------KLTNDI 175
+ YRPGDI+ A L L + +Y LSTA+NELGVV A S A + +LT I
Sbjct: 132 QSYRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAQSIAGGTLVPTSWTEMQCELTGQI 191
Query: 176 EFLKQEKL 183
E K K+
Sbjct: 192 EQRKVAKV 199
>gi|255562013|ref|XP_002522015.1| conserved hypothetical protein [Ricinus communis]
gi|223538819|gb|EEF40419.1| conserved hypothetical protein [Ricinus communis]
Length = 593
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 93/162 (57%), Gaps = 9/162 (5%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQ------GYLYSTLAGTVSINKHVEDNKEV-SVIEVSSY 61
PG+ + + S++ G+G YV Y+YS+L+G + D+ + +EV+
Sbjct: 404 PGEVLGKA-SELKAGKGAYVAPYRNTDIFYVYSSLSGFLRTLAPTPDSPDQRPTVEVTGL 462
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
K VP G VV AR+ V + A ++ VG ++ F L+R+++VRATEID+++M
Sbjct: 463 KARGAVPEAGSVVIARVTKVMAKMASADIMCVGPKSVREKFTGLIRQQDVRATEIDKVDM 522
Query: 122 YKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSEAA 162
+ +RPGDI+ A L L + +Y LSTA+NELGVV A S A
Sbjct: 523 HLSFRPGDIVRAVVLSLGDARAYYLSTAKNELGVVSAESTAG 564
>gi|465958489|gb|EMP27915.1| Exosome complex component CSL4 [Chelonia mydas]
Length = 154
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 78/120 (65%), Gaps = 8/120 (6%)
Query: 52 EVSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENV 111
++ V+ V + ++P G +VT ++ ++ K H++ +G+T L FR +RRE++
Sbjct: 2 QLPVVSVVRDAESQLLPDVGAIVTCKVCSINSRFAKVHILYIGSTPLKSAFRGTIRREDI 61
Query: 112 RATEIDRIEMYKCYRPGDIILAR-------LPLKELHS-YQLSTAENELGVVIALSEAAS 163
RATE D++E+YK +RPGDI+LA+ + L ++ S Y LSTAENELGVV+A SEA +
Sbjct: 62 RATEKDKVEVYKSFRPGDIVLAKVVSFPAGISLGDMQSNYLLSTAENELGVVVAHSEAGA 121
>gi|482551172|gb|EOA15365.1| hypothetical protein CARUB_v10005774mg, partial [Capsella rubella]
Length = 199
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 93/159 (58%), Gaps = 3/159 (1%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDN-KEVSVIEVSSYKKE 64
+ PG I + ++ G+G YV +Y++L GT I + ++ + + +EV+ +K
Sbjct: 13 LVTPGDVIGKA-TEFKAGKGAYVNDTTIYASLTGTRRIVSPLPESLDKRATVEVTGHKAH 71
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
+P PG VV AR+ V + ++ VG A+ F ++R+++VRATEID++++++
Sbjct: 72 GPIPEPGSVVIARVTKVMARMAAVDILCVGPKAVRENFAGVIRQQDVRATEIDKVDLHQS 131
Query: 125 YRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
+ GDI+ A L L + +Y LSTA+NELGVV A S A
Sbjct: 132 FHAGDIVRAMVLSLGDARAYYLSTAKNELGVVSAESAAG 170
>gi|300121793|emb|CBK22367.2| unnamed protein product [Blastocystis hominis]
Length = 206
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 109/202 (53%), Gaps = 16/202 (7%)
Query: 8 IPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIV 67
+PG RI + + G G + G +YS++ GT + + ++ +I V K+VI+
Sbjct: 10 VPGDRIGSCE-EFECGDGVFANNGIIYSSIVGT----RKQKPGTKLPIIYVEP-AKQVII 63
Query: 68 PTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRP 127
P GD+V AR+ V + H++ V A++ FR +R+ +VRA EID++ MY +R
Sbjct: 64 PNVGDIVLARVTYVTAVMASLHILCVNGVAVTSYFRGTIRKNHVRAFEIDKVVMYNSFRI 123
Query: 128 GDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS-LFRSSEKL-----TNDIEFLKQ 180
GDI+ AR L + SY LST +N+LGV++A S S + S +L T +E+ K
Sbjct: 124 GDIVRARVLSRGDRRSYFLSTDQNDLGVILATSATGSPMIPVSWELMQCPETKQVEYRKV 183
Query: 181 EKLKLYEE---LSSSQKENEIL 199
K+ EE L + Q NE++
Sbjct: 184 AKILSDEEINVLKNKQLVNELV 205
>gi|395501798|ref|XP_003755277.1| PREDICTED: exosome complex component CSL4 [Sarcophilus harrisii]
Length = 307
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
Query: 53 VSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVR 112
+ V+ V+ + ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VR
Sbjct: 162 LPVVSVTRETESQMLPDVGTIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVR 221
Query: 113 ATEIDRIEMYKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
ATE D++E+YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 222 ATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 273
>gi|66809117|ref|XP_638281.1| hypothetical protein DDB_G0285377 [Dictyostelium discoideum AX4]
gi|60466712|gb|EAL64763.1| hypothetical protein DDB_G0285377 [Dictyostelium discoideum AX4]
Length = 156
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 82/146 (56%), Gaps = 17/146 (11%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSV---------- 55
I PGQR+C+ +SD + GTYV +GY+YS++ G + K D +
Sbjct: 9 IITPGQRLCK-ESDFISSEGTYVHKGYIYSSVLGFKHVIKRNIDTTNENNVNNSNNSNEI 67
Query: 56 ------IEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRE 109
I V K+ +VP G +VT +++ + L ++ VG AL TF ++R +
Sbjct: 68 ENNKDYIVVLKEKEPSVVPEIGSIVTVQVLRINPKLASVAILCVGTKALKETFNGIIRIQ 127
Query: 110 NVRATEIDRIEMYKCYRPGDIILARL 135
+VRATEID++E+YK +RPGDI+LA++
Sbjct: 128 DVRATEIDKVEIYKSFRPGDIVLAQI 153
>gi|501755802|emb|CCG81115.1| Putative uncharacterized protein [Taphrina deformans PYCC 5710]
Length = 198
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 10/192 (5%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKE- 64
+C PGQ + S+ V G GT V + S+L G K DN E+SV+ SS E
Sbjct: 8 VC-PGQDLGPSTSNFVAGPGTTVHNDRIRSSLVGQRQTRKE-GDNTEISVVRNSSKLGEE 65
Query: 65 ------VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDR 118
++P G++V AR+ + + ++ VG TAL+ F+ ++R +VRATE D+
Sbjct: 66 SIGQSLNLLPEVGNIVLARVTRINRLQANTQILVVGETALAEDFQGIVRIADVRATEKDK 125
Query: 119 IEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLFRSSEKLTNDIEF 177
+ ++ +RPGDII A + L + SY LSTA+NELGV+ A ++ + + T E
Sbjct: 126 VRIHTSFRPGDIIRAEVISLGDQSSYFLSTAQNELGVLFAWNDVGEMMYPASWNTMQTES 185
Query: 178 LKQEKLKLYEEL 189
E+ K+ +
Sbjct: 186 GSAEERKVAKPF 197
>gi|255634132|gb|ACU17429.1| unknown [Glycine max]
Length = 189
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 93/162 (57%), Gaps = 5/162 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTY--VRQGYLYSTLAGTVSINKHVEDNKEV-SVIEVSSYK 62
+ PG+ + + SD+ GRG Y + +Y++L G D+ ++ +EV+ +K
Sbjct: 9 MVTPGEVLGRT-SDVKAGRGAYAALHNNTVYASLTGFRHTVPPAPDSSDLRPTVEVTGHK 67
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
VP PG VV AR+ V A ++ VG ++ F ++R+++VRATEID+++M+
Sbjct: 68 AHGPVPQPGSVVIARVTKVMARSASADIMCVGPKSVREKFTGIIRQQDVRATEIDKVDMH 127
Query: 123 KCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
+ PGDI+ A L L + +Y LSTA+NELGVV A S A +
Sbjct: 128 LSFHPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESIAGA 169
>gi|363814479|ref|NP_001242874.1| uncharacterized protein LOC100796154 [Glycine max]
gi|255640712|gb|ACU20640.1| unknown [Glycine max]
Length = 197
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 92/162 (56%), Gaps = 5/162 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTY--VRQGYLYSTLAGTVSINKHVEDNKEV-SVIEVSSYK 62
+ PG+ + SD+ GRG Y + +Y++L G D+ ++ +EV+ +K
Sbjct: 9 MVTPGE-VLGRTSDVKAGRGAYAALHNNTVYASLTGFRHTVPPAPDSSDLRPTVEVTGHK 67
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
VP PG VV AR+ V A ++ VG ++ F ++R+++VRATEID+++M+
Sbjct: 68 AHGPVPQPGSVVIARVTKVMARSASADIMCVGPKSVRGKFTGIIRQQDVRATEIDKVDMH 127
Query: 123 KCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
+ PGDI+ A L L + +Y LSTA+NELGVV A S A +
Sbjct: 128 LSFHPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESIAGA 169
>gi|336472238|gb|EGO60398.1| hypothetical protein NEUTE1DRAFT_119585 [Neurospora tetrasperma
FGSC 2508]
gi|350294544|gb|EGZ75629.1| hypothetical protein NEUTE2DRAFT_105638 [Neurospora tetrasperma
FGSC 2509]
Length = 214
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 102/183 (55%), Gaps = 24/183 (13%)
Query: 2 SNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVED-------NK--- 51
S+P + IPGQ + + S G GT++ + LYS+L G V+I + + NK
Sbjct: 6 SSPSMAIPGQFLGPI-SKFQPGPGTHIHESNLYSSLLGVVNITQPAKAPGPAKRLNKIIN 64
Query: 52 ------EVSVIEV-----SSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSR 100
E+ I V SS K+EV+ P G++V R++ + ++ G+T L
Sbjct: 65 TQTTPAELPTISVLRSAGSSDKREVL-PEVGNIVLCRVIRIMPRQAVVAILICGDTVLEA 123
Query: 101 TFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
++ L+R ++VRATE DR+++Y +RPGDI+ A + L + SY LSTA NELGV++A S
Sbjct: 124 EWQGLIRVQDVRATEKDRVKIYDSFRPGDIVRAEVISLGDQASYYLSTARNELGVIMATS 183
Query: 160 EAA 162
EA
Sbjct: 184 EAG 186
>gi|85102296|ref|XP_961311.1| hypothetical protein NCU04155 [Neurospora crassa OR74A]
gi|12718206|emb|CAC28750.1| conserved hypothetical protein [Neurospora crassa]
gi|28922854|gb|EAA32075.1| hypothetical protein NCU04155 [Neurospora crassa OR74A]
Length = 214
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 102/183 (55%), Gaps = 24/183 (13%)
Query: 2 SNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVED-------NK--- 51
S+P + IPGQ + + S G GT++ + LYS+L G V+I + + NK
Sbjct: 6 SSPSMAIPGQFLGPV-SKFQPGPGTHIHESNLYSSLLGVVNITQPAKAPGPAKRLNKIIN 64
Query: 52 ------EVSVIEV-----SSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSR 100
E+ I V SS K+EV+ P G++V R++ + ++ G+T L
Sbjct: 65 TQTTPAELPTISVLRSAGSSDKREVL-PEVGNIVLCRVIRIMPRQAVVAILICGDTVLEA 123
Query: 101 TFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
++ L+R ++VRATE DR+++Y +RPGDI+ A + L + SY LSTA NELGV++A S
Sbjct: 124 EWQGLIRVQDVRATEKDRVKIYDSFRPGDIVRAEVISLGDQASYYLSTARNELGVIMATS 183
Query: 160 EAA 162
EA
Sbjct: 184 EAG 186
>gi|115449601|ref|NP_001048506.1| Os02g0815800 [Oryza sativa Japonica Group]
gi|113538037|dbj|BAF10420.1| Os02g0815800 [Oryza sativa Japonica Group]
Length = 197
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
Query: 54 SVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRA 113
S +EV +K VP PG VV AR+ V + A ++ V + A+ F ++R+++VRA
Sbjct: 60 STVEVVGHKAHGAVPQPGSVVIARVTKVMARMASADIMCVDSKAVKEKFTGMIRQQDVRA 119
Query: 114 TEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
TEID+++M++ YRPGDI+ A L L + +Y LSTA+NELGVV A S
Sbjct: 120 TEIDKVDMFQSYRPGDIVRALVLSLGDARAYYLSTAQNELGVVSAQS 166
>gi|47848174|dbj|BAD22001.1| exoribonuclease-like [Oryza sativa Japonica Group]
gi|218191808|gb|EEC74235.1| hypothetical protein OsI_09429 [Oryza sativa Indica Group]
gi|222623907|gb|EEE58039.1| hypothetical protein OsJ_08863 [Oryza sativa Japonica Group]
Length = 192
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
Query: 54 SVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRA 113
S +EV +K VP PG VV AR+ V + A ++ V + A+ F ++R+++VRA
Sbjct: 55 STVEVVGHKAHGAVPQPGSVVIARVTKVMARMASADIMCVDSKAVKEKFTGMIRQQDVRA 114
Query: 114 TEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
TEID+++M++ YRPGDI+ A L L + +Y LSTA+NELGVV A S
Sbjct: 115 TEIDKVDMFQSYRPGDIVRALVLSLGDARAYYLSTAQNELGVVSAQS 161
>gi|375332113|gb|AFA52596.1| hypothetical protein [Vaucheria litorea]
Length = 191
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 104/186 (55%), Gaps = 15/186 (8%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+C PG RI + D + G GTYVR ++YS+L G + + +E + + V+ V KK V
Sbjct: 5 VC-PGDRIGRCD-EYTSGNGTYVRGPHIYSSLVGRI---QKIEVPENLPVLTVKG-KKAV 58
Query: 66 I--VPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYK 123
+ + G VV R+ V+ +L ++ G L + ++R+E+VR+TE+D+++M+K
Sbjct: 59 VGQILEVGVVVMGRVTRVKNNLASVDILCAGKFVLREICQGIIRKEDVRSTEVDKVDMWK 118
Query: 124 CYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLFR--SSEKL----TNDIE 176
C+RPGDI+ + + L Y LST+ +LGV A SEA + S E++ T +E
Sbjct: 119 CFRPGDIVRTKVISLGNSRDYFLSTSGEDLGVSWARSEAGEVLVPISWEQMQCPKTKAVE 178
Query: 177 FLKQEK 182
F K K
Sbjct: 179 FRKCAK 184
>gi|462401586|gb|EMJ07143.1| hypothetical protein PRUPE_ppa011808mg [Prunus persica]
Length = 195
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 84/145 (57%), Gaps = 4/145 (2%)
Query: 23 GRGTYVRQGYL--YSTLAGTVSINKHVEDNKEV-SVIEVSSYKKEVIVPTPGDVVTARIM 79
GRG YV L Y++L G I D+ + +EV+ +K +P PG +V AR+
Sbjct: 23 GRGAYVSPDNLTVYASLTGLRRILSPRPDSPDQRPTVEVTGHKAHGAIPEPGSIVIARVT 82
Query: 80 AVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLK 138
V + A ++ +G ++ F ++R ++VRATEID+++M+ + PGDI+ A L L
Sbjct: 83 KVMARMASADIMCLGTKSVREKFTGIIRLQDVRATEIDKVDMHMSFHPGDIVRAVVLSLG 142
Query: 139 ELHSYQLSTAENELGVVIALSEAAS 163
+ +Y LSTA+NELGV+ A S A +
Sbjct: 143 DARAYYLSTAKNELGVISAQSAAGA 167
>gi|471562036|gb|EMR63650.1| putative 3 -5 exoribonuclease csl4 protein [Eutypa lata UCREL1]
Length = 448
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 106/186 (56%), Gaps = 24/186 (12%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKH----------------VED 49
+ IPGQ + + G GT++ LYS+L GTVS+ + +++
Sbjct: 5 VAIPGQPLGAANK-YNAGPGTHIHDTNLYSSLLGTVSVVQPEKAPSGPVKRMTKITPLQE 63
Query: 50 NKEVSVIEVS----SYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRAL 105
++ I VS S K+EV+ P G+VV R+ + ++ VG+T L ++ +
Sbjct: 64 TTKLPTISVSRSGLSEKREVL-PEVGNVVLCRVTRISPRQATVAILVVGDTVLEGEWQGI 122
Query: 106 LRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA-S 163
+R ++VRATE DR+++Y+ +RPGDI+ A+ + L + +Y L+TA NELGV++A SEA +
Sbjct: 123 IRVQDVRATEKDRVKIYESFRPGDIVRAQVISLGDQANYYLATASNELGVIMATSEAGNT 182
Query: 164 LFRSSE 169
+F +++
Sbjct: 183 MFPAAD 188
>gi|330800727|ref|XP_003288385.1| hypothetical protein DICPUDRAFT_33962 [Dictyostelium purpureum]
gi|325081567|gb|EGC35078.1| hypothetical protein DICPUDRAFT_33962 [Dictyostelium purpureum]
Length = 157
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 20/148 (13%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVS----------- 54
+ PGQR+ + DS+ + GTY +GY+YS++ G I K NK S
Sbjct: 5 VITPGQRLAK-DSEYISSEGTYTHKGYIYSSVLGFQHIIKK-NLNKPTSEEINNSNNSNV 62
Query: 55 -------VIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLR 107
I V K+ +VP G +VT +++ + L ++ VG AL TF ++R
Sbjct: 63 NNSDDRDFIVVLKEKEPSVVPEIGSIVTVQVLRINPKLASVAILCVGTKALKETFNGIIR 122
Query: 108 RENVRATEIDRIEMYKCYRPGDIILARL 135
++VRATEID++E+YK +RPGDI+LA++
Sbjct: 123 IQDVRATEIDKVEIYKSFRPGDIVLAQI 150
>gi|302911154|ref|XP_003050430.1| hypothetical protein NECHADRAFT_96196 [Nectria haematococca mpVI
77-13-4]
gi|256731367|gb|EEU44717.1| hypothetical protein NECHADRAFT_96196 [Nectria haematococca mpVI
77-13-4]
Length = 208
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 104/176 (59%), Gaps = 17/176 (9%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSI-------------NK-HVED 49
PPI +PG+ + + + G GT+V +G + S+L G V++ NK
Sbjct: 7 PPIAMPGKVLGPV-TKFAPGPGTHVYEGNVVSSLLGKVTVIQPAKAAGPAKRLNKITAPT 65
Query: 50 NKEVSVIEVSSY-KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRR 108
+E++ + VS + +K ++P ++V AR++ + + VG+T L ++ ++R
Sbjct: 66 TEELATVSVSRHGRKREVLPDVDNIVLARVLRLMPKQAIVVIQQVGDTVLETEWQGVIRV 125
Query: 109 ENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
++VRATE D++++Y+ ++PGDI+ A+ + L + +Y LSTA NELGVV+A+SEA +
Sbjct: 126 QDVRATEKDKVKIYESFKPGDIVRAQVISLGDQANYYLSTASNELGVVMAMSEAGN 181
>gi|299470812|emb|CBN78635.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 190
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 91/166 (54%), Gaps = 11/166 (6%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKK-- 63
+C PG+R+ + S+ G GTYVR Y+Y+++ G + + D + VS K+
Sbjct: 5 VC-PGKRLGRA-SEYRAGPGTYVRGTYIYASVVGP-KLEQAAADEDGKPYLIVSQPKRAR 61
Query: 64 ---EVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE 120
+VI GD V R+ + +I VG T L R ++R+E++RATE+D+ E
Sbjct: 62 AADQVI--QVGDTVMGRVTRISTRQAWVEIICVGETVLREPHRGIVRKEDIRATEVDKAE 119
Query: 121 MYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
+ K RPGDII AR + L + Y LSTAENELGV A S A ++
Sbjct: 120 VAKSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIM 165
>gi|167537131|ref|XP_001750235.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771225|gb|EDQ84894.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 92/165 (55%), Gaps = 8/165 (4%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSIN----KHVEDNKEVSVI--EVS 59
+ +PG R+ + D D G GTYVR + ++L GTV I+ ED +V + V
Sbjct: 14 VVLPGTRLAKAD-DYAAGEGTYVRHDRVCASLRGTVVIHTPEPSEDEDAAKVKAVLRVVR 72
Query: 60 SYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRI 119
++P+ G VT ++ ++ + ++ V ++ F ++R +++RA E D++
Sbjct: 73 GGAVPSLMPSVGSTVTCKVTSINTQQARVVILCVDGKPVATRFSGIIRIQDIRALEKDKV 132
Query: 120 EMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
EM+ +RP D++LAR + L + SY LSTAE+ LGV+ A SEA +
Sbjct: 133 EMHSSFRPNDVVLARVISLGDARSYYLSTAEDALGVIAARSEAGA 177
>gi|336257905|ref|XP_003343774.1| hypothetical protein SMAC_04432 [Sordaria macrospora k-hell]
gi|380091597|emb|CCC10729.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 214
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 101/183 (55%), Gaps = 24/183 (13%)
Query: 2 SNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVED-------NK--- 51
S+P + IPGQ + + S G GT++ + L ++L G V+I + + NK
Sbjct: 6 SSPSMAIPGQFLGPV-SKFQPGPGTHIHESNLCASLLGVVNITQPAKAPGPAKRLNKIIN 64
Query: 52 ------EVSVIEV-----SSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSR 100
E+ I V SS K+EV+ P G++V R++ + ++ G+T L
Sbjct: 65 TQTSPAELPTISVLRAAGSSDKREVL-PEVGNIVLCRVIRIMPRQAVVAILICGDTVLEA 123
Query: 101 TFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
++ L+R ++VRATE DR+++Y +RPGDI+ A + L + SY LSTA NELGV++A S
Sbjct: 124 EWQGLIRVQDVRATEKDRVKIYDSFRPGDIVRAEVISLGDQASYYLSTARNELGVIMATS 183
Query: 160 EAA 162
EA
Sbjct: 184 EAG 186
>gi|307110096|gb|EFN58333.1| hypothetical protein CHLNCDRAFT_30168 [Chlorella variabilis]
Length = 192
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 90/156 (57%), Gaps = 3/156 (1%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSV-IEVSSYKKEVIV 67
PG+R+ L ++ G GT V+ ++ +TL G+ + E E +EV E +V
Sbjct: 9 PGERLA-LVAEYDAGSGTCVKDKFICATLVGSKRVLPAGEGEAEQRPRVEVVRSGVEPVV 67
Query: 68 PTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRP 127
P GD VTAR++ + L ++ VG + + + ++R ++VRATEID++++ +RP
Sbjct: 68 PRVGDTVTARVVRINPRLAAVDILCVGPKPVRQRYSGVIRVQDVRATEIDKVQVQASFRP 127
Query: 128 GDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
GD++ A L L + SY L+TA+N+LGVV A S A
Sbjct: 128 GDVVRAEVLSLGDARSYHLTTAKNQLGVVYAKSVAG 163
>gi|513192550|ref|XP_003641534.2| PREDICTED: exosome complex component CSL4 [Gallus gallus]
Length = 235
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 67/97 (69%), Gaps = 7/97 (7%)
Query: 73 VVTARIMAVQ-----QHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRP 127
+TAR +VQ K +++ VG+T L TFR +RRE++RATE D++E+YK +RP
Sbjct: 105 ALTARCPSVQVCSINSRFAKVNILYVGSTPLKSTFRGTIRREDIRATEKDKVEVYKSFRP 164
Query: 128 GDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
GDI+LA+ + L + S Y LSTAENELGVV+A SEA
Sbjct: 165 GDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAG 201
>gi|507111067|emb|CDF34803.1| exosome component 1 Csl1 [Chondrus crispus]
Length = 189
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 89/158 (56%), Gaps = 6/158 (3%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYK---KEV 65
PG ++ ++ S G G YV L ++L GT+ I + + + + ++ VSS K
Sbjct: 7 PGDKVGEVRS-YRPGHGVYVHNDILIASLVGTL-ITEKPTNGETMPLLRVSSSKYAGGAP 64
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+P G VVTA+I V ++ + L F+ +R+++VR TEID++E+YKC+
Sbjct: 65 PLPDIGSVVTAKITKVTPRAASVEILVIDGRPLRELFKGTIRQQDVRQTEIDKVEIYKCF 124
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
P D++ A + L + H+Y LSTA+NELGV+ A S A
Sbjct: 125 APSDVVRAEVISLGDRHAYFLSTAKNELGVIYAKSRAG 162
>gi|326923846|ref|XP_003208144.1| PREDICTED: 3'-5' exoribonuclease CSL4 homolog [Meleagris gallopavo]
Length = 126
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 75 TARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR 134
T + ++ K +++ VG+T L TFR +R+E++RATE D++E+YK +RPGDI+LA+
Sbjct: 3 TDTVCSINSRFAKVNILYVGSTPLKSTFRGTIRKEDIRATEKDKVEVYKSFRPGDIVLAK 62
Query: 135 -LPLKELHS-YQLSTAENELGVVIALSEAA 162
+ L + S Y LSTAENELGVV+A SEA
Sbjct: 63 VISLGDAQSNYLLSTAENELGVVVARSEAG 92
>gi|29841415|gb|AAP06447.1| similar to NM_016046 homolog of yeast exosomal core protein CSL4 in
Homo sapiens [Schistosoma japonicum]
Length = 250
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 74/130 (56%), Gaps = 3/130 (2%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
I +PG IC ++ G TY R G ++S+ G + H + +K VSV K
Sbjct: 6 IVVPGDLICCSNATNKSGTSTYCRSGNIFSSAFGYIKEESHADGSKTVSV---EPLKTAG 62
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
IVP G +V A++ ++ + +++VG+ LS F+ L+RRE++RAT+ D+ E C+
Sbjct: 63 IVPYAGAIVLAKVCSITGRFVRCDIVAVGDVYLSGPFKGLIRREDIRATQRDQAEPGCCF 122
Query: 126 RPGDIILARL 135
RPGDI+ AR+
Sbjct: 123 RPGDIVRARV 132
>gi|46125893|ref|XP_387500.1| hypothetical protein FG07324.1 [Fusarium graminearum PH-1]
Length = 603
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 100/175 (57%), Gaps = 17/175 (9%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVED-------------- 49
P + +PG+ + + + G GT+ +G + S+L G V++ +
Sbjct: 7 PSVALPGKVLGPV-TKFAPGAGTHAYEGNVVSSLLGQVTVTPAAKGPGPQKRLNKITAPT 65
Query: 50 NKEVSVIEVSSY-KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRR 108
++E++ I VS + +K I+P ++V AR++ + + VG+T L ++ L+R
Sbjct: 66 SEELATISVSRHGRKREILPDVDNIVLARVLRLMPKQAIVVIQQVGDTVLQTEWQGLIRV 125
Query: 109 ENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
++VRATE D++++Y+ ++PGDI+ A+ + L + +Y LSTA NELGV++A SEA
Sbjct: 126 QDVRATEKDKVKIYESFKPGDIVRAQVISLGDQANYYLSTASNELGVILATSEAG 180
>gi|408396471|gb|EKJ75628.1| hypothetical protein FPSE_04129 [Fusarium pseudograminearum CS3096]
Length = 208
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVED-------------- 49
P + +PG+ + + + G GT+V +G + S+L G V++ +
Sbjct: 7 PSVALPGKVLGPV-TKFAPGAGTHVYEGNVVSSLLGQVTVTPAAKGPGPQKRLNKITAPT 65
Query: 50 NKEVSVIEVSSY-KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRR 108
+ E++ I VS + +K I+P ++V AR++ + + VG+T L ++ L+R
Sbjct: 66 SDELAAISVSRHGRKREILPDVDNIVLARVLRLMPKQAIVVIQQVGDTVLQTEWQGLIRV 125
Query: 109 ENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
++VRATE D++++Y+ ++PGDI+ A+ + L + +Y LSTA NELGV++A SEA +
Sbjct: 126 QDVRATEKDKVKIYESFKPGDIVRAQVISLGDQANYYLSTASNELGVILATSEAGN 181
>gi|149040181|gb|EDL94219.1| rCG57589, isoform CRA_d [Rattus norvegicus]
Length = 118
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEGSPG-SGTYTRHGYIFSSLAGCLT---KTSENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRI 119
+ ++P G VVT ++ ++ K H++ VG+T L FR +R+E++RATE D++
Sbjct: 59 TESQLLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKV 116
>gi|356574865|ref|XP_003555564.1| PREDICTED: LOW QUALITY PROTEIN: exosome complex component CSL4-like
[Glycine max]
Length = 167
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 47 VEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALL 106
++D +EV+ +K VP PG VV AR+ V A ++ VG ++ F ++
Sbjct: 22 IKDGNTRLTVEVTGHKSHGPVPQPGSVVIARVTKVMARSASADIMCVGPKSVREKFTGII 81
Query: 107 RRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
R+++VRATEID+++M+ + PGDI+ A L L + +Y LSTA+NELGVV A S A +
Sbjct: 82 RQQDVRATEIDKVDMHLSFHPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESIAGA 139
>gi|340914869|gb|EGS18210.1| putative exosome 3'->5 protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 220
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 30/190 (15%)
Query: 2 SNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINK---------------H 46
+ P + +PGQ + + S G GT+V + LYS+L GTV + +
Sbjct: 4 TQPTLALPGQLLGPI-SKYQPGPGTHVHESNLYSSLLGTVHVTQPARAPGPVKRLNRITP 62
Query: 47 VEDNKEVSVIEVSSY-------------KKEVIVPTPGDVVTARIMAVQQHLCKAHVISV 93
E+ I VS+ +K I+P G++V R++ + ++
Sbjct: 63 APTPAELPTISVSAARPAGSAASGLVTGRKREILPEVGNIVLCRVIRITPRQAVVTILVC 122
Query: 94 GNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENEL 152
G+T L ++ L+R +++RATE DR+++Y+ +RPGDI+ A + L + +Y LSTA NEL
Sbjct: 123 GDTVLDAEWQGLIRVQDIRATEKDRVKVYESFRPGDIVRAEVISLGDQANYYLSTARNEL 182
Query: 153 GVVIALSEAA 162
GV++A SEA
Sbjct: 183 GVILATSEAG 192
>gi|322705465|gb|EFY97051.1| exosomal core protein CSL4 [Metarhizium anisopliae ARSEF 23]
Length = 208
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 98/176 (55%), Gaps = 17/176 (9%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSI-------------NK-HVED 49
PP+ +PG + S G GT+ QG + S+L G V + NK
Sbjct: 7 PPVAVPGH-VLGPASRYTPGPGTHTHQGNVVSSLLGRVHVAAPAKAPGPAKRLNKITAAA 65
Query: 50 NKEVSVIEVSSY-KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRR 108
+E+ + V+ + ++ I+P +VV AR++ + + VG+T L ++ ++R
Sbjct: 66 PEELPTVSVARHGRRREILPDVNNVVLARVVRLMPKQAIVVIQQVGDTVLQTEWQGVIRV 125
Query: 109 ENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
++VRATE D+++MY+ ++PGDI+ A+ + L + +Y LSTA NELGV++A SEA +
Sbjct: 126 QDVRATEKDKVKMYESFKPGDIVKAQVISLGDQANYYLSTASNELGVIMAASEAGN 181
>gi|401405869|ref|XP_003882384.1| 3'-5' exoribonuclease CSL4, related [Neospora caninum Liverpool]
gi|325116799|emb|CBZ52352.1| 3'-5' exoribonuclease CSL4, related [Neospora caninum Liverpool]
Length = 271
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 16/164 (9%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINK-------HVEDNKEVSVIE---- 57
PG+R+ S+ GRGTYV+ ++Y+ + G + E +E S
Sbjct: 73 PGERLGST-SEFAPGRGTYVKDDFIYAAIVGLEHVGPPSPRPPTSAEGTREESKAAGLPV 131
Query: 58 ---VSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRAT 114
VSS K ++PT G V A++ + H +++V L+ FR +R +++R T
Sbjct: 132 LSVVSSAKCAAVLPTTGCFVLAQVTKISHHRVDCSILAVDGQTLAEPFRGFIRSQDIRET 191
Query: 115 EIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIA 157
++D +++ +CY+PGD++ A+ + + + Y LSTA ELGV+ A
Sbjct: 192 DVDSVDVLECYKPGDVVRAKVISVGDGRCYVLSTASAELGVLFA 235
>gi|470371609|ref|XP_004332858.1| RNA-binding domain-containing protein [Acanthamoeba castellanii
str. Neff]
gi|440789538|gb|ELR10845.1| RNA-binding domain-containing protein [Acanthamoeba castellanii
str. Neff]
Length = 240
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 88/179 (49%), Gaps = 28/179 (15%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAG----------------------TVSI 43
+ +PGQR+ + D G GTYVR ++Y+++ G +
Sbjct: 28 VVVPGQRVGHAE-DYAAGEGTYVRGSHIYASVLGRRRLLSPAEAQRWREGLNVGEEASPV 86
Query: 44 NKHVEDNKEVSVIE----VSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALS 99
N + K V V+E VP GDVVT ++ V + ++ VG AL
Sbjct: 87 NGGEDAGKSVVVVEKAGGRGLGGGGGWVPRAGDVVTGVVVRVTPRVAAVNIACVGRRALP 146
Query: 100 RTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIA 157
TF ++R ++VRAT +++E+YK +RPGD++ A L L + SY LST N+LGVV A
Sbjct: 147 ETFSGIVRSQDVRATATEQVELYKAFRPGDVVRAEVLSLGDARSYFLSTGRNDLGVVSA 205
>gi|345323768|ref|XP_001505605.2| PREDICTED: exosome complex component CSL4-like, partial
[Ornithorhynchus anatinus]
Length = 121
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Query: 78 IMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LP 136
+ ++ + H++ VG+T L +FR +R+E+VRATE D++E+YK +RPGDI+LA+ +
Sbjct: 1 VSSINSRFARVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYKSFRPGDIVLAKVIS 60
Query: 137 LKELHS-YQLSTAENELGVVIALSEAAS 163
L + S Y L+TAENELGVV+A EA +
Sbjct: 61 LGDAQSNYLLTTAENELGVVVAHGEAGA 88
>gi|171693975|ref|XP_001911912.1| hypothetical protein [Podospora anserina S mat+]
gi|170946936|emb|CAP73740.1| unnamed protein product [Podospora anserina S mat+]
Length = 218
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 98/189 (51%), Gaps = 28/189 (14%)
Query: 2 SNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDN----------- 50
SNP + IPGQ + S G GT++ ++++L GTV I + +
Sbjct: 4 SNPTLAIPGQLLGS-TSRYQPGPGTHIHNHNVHASLMGTVHIAQPAKAPGPVKRLTKITP 62
Query: 51 ----KEVSVIEV-----------SSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGN 95
E+ I V + KK ++P G+VV R++ + ++ G+
Sbjct: 63 APAPAELPTISVTVPTRSAGSDHAGQKKREVLPEVGNVVLCRVIRITPRQAVVSILVCGD 122
Query: 96 TALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGV 154
T L ++ L+R ++VRATE DR+++Y+ +RPGDI+ A + L + +Y LSTA NELGV
Sbjct: 123 TVLDAEWQGLIRVQDVRATEKDRVKIYESFRPGDIVRAEVISLGDQANYYLSTARNELGV 182
Query: 155 VIALSEAAS 163
++A SEA +
Sbjct: 183 ILATSEAGN 191
>gi|342879077|gb|EGU80352.1| hypothetical protein FOXB_09149 [Fusarium oxysporum Fo5176]
gi|475667330|gb|EMT65119.1| Exosome complex component CSL4 [Fusarium oxysporum f. sp. cubense
race 4]
Length = 208
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVED-------------- 49
P + +PG + + + G GT+V +G + S+L G V++ ++
Sbjct: 7 PSVALPGNVLGPV-TKFAPGAGTHVYEGNVVSSLLGRVTVTPPTKNPGPQKRLNKITAPT 65
Query: 50 NKEVSVIEVSSY-KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRR 108
+E++ I VS + +K I+P ++V AR++ + + VG+T L ++ ++R
Sbjct: 66 TEELATISVSRHGRKREILPDVENIVLARVLRLMPKQAIVVIQQVGDTVLQTEWQGVIRV 125
Query: 109 ENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
++VRATE D++++Y+ ++PGDI+ A+ + L + +Y LSTA NELGVV+A SEA +
Sbjct: 126 QDVRATEKDKVKIYESFKPGDIVRAQVISLGDQANYYLSTASNELGVVMATSEAGN 181
>gi|403376905|gb|EJY88440.1| EXOSC1 domain containing protein [Oxytricha trifallax]
Length = 224
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 19/161 (11%)
Query: 19 DIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKE-------------- 64
D + G+GTY +Y++ G V+I+K D +SV + +K+
Sbjct: 15 DCISGKGTYTYLKGVYASQTGFVNIDKSQGDKSIISVERTNQSEKKNDSSQQTQSNIESN 74
Query: 65 -VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYK 123
P G++V ARI V+ + KA ++++ N L F+ +L +ENVR +ID +E+ K
Sbjct: 75 VFGQPKIGNLVYARITRVEPNFVKAEILAIENQPLKTVFQGILFKENVRTYDIDNLELLK 134
Query: 124 CYRPGDIILARLPLKELHSYQ----LSTAENELGVVIALSE 160
C+RP DII AR+ ++ Q LST E+E GVV A SE
Sbjct: 135 CFRPNDIIRARVISEQGAGNQMSTLLSTVEDENGVVFARSE 175
>gi|500255165|gb|EON98682.1| putative 3 -5 exoribonuclease csl4 protein [Togninia minima UCRPA7]
Length = 209
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 102/191 (53%), Gaps = 22/191 (11%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVE--------------DNK 51
I IPGQ + + + G GT++ + LY++L G V I + +
Sbjct: 8 IAIPGQLLGPA-AKYLPGAGTHIHEANLYASLLGVVHIAQPAKAPGPSKRLTKITAPPPA 66
Query: 52 EVSVIEVS----SYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLR 107
E+ I +S S K+EV+ P ++V R+ + ++ G+T L ++ L+R
Sbjct: 67 ELPTISISRSGISEKREVL-PEVDNIVLCRVTRITPRQAVVAILVCGDTVLDAEWQGLIR 125
Query: 108 RENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA-SLF 165
++VRATE DR+++Y+ +RPGDI+ A+ + L + +Y LST NELGV++A SEA +++
Sbjct: 126 VQDVRATEKDRVKVYESFRPGDIVRAKVISLGDQANYYLSTGSNELGVIMATSEAGNTMY 185
Query: 166 RSSEKLTNDIE 176
S K D E
Sbjct: 186 PVSWKEYKDPE 196
>gi|340522313|gb|EGR52546.1| predicted protein [Trichoderma reesei QM6a]
Length = 560
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 20/205 (9%)
Query: 2 SNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVED-------NK--- 51
S P + IPG + S G GT+V G + S+L G VS+ + NK
Sbjct: 5 SIPTLAIPGT-VLGPTSKYAPGPGTHVYGGNVVSSLLGNVSVTAPAKAPGPVKRLNKITA 63
Query: 52 ----EVSVIEV--SSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRAL 105
E+S I V K+EV+ P G++V AR++ + + VG+T L ++ +
Sbjct: 64 PTAEELSTISVVRRGRKREVL-PDVGNIVLARVVRLMPKQAIVVIQQVGSTVLQTEWQGV 122
Query: 106 LRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS- 163
+R ++VRATE D++++++ ++PGDI+ A+ + L + +Y LSTA NELGV++A S+A +
Sbjct: 123 IRVQDVRATEQDKVKIHESFKPGDIVRAQVISLGDQANYYLSTAANELGVIMATSDAGND 182
Query: 164 LFRSSEKLTNDIEFLKQEKLKLYEE 188
+ S K D E E KL+++
Sbjct: 183 MVPISWKEFRDPETGVSEPRKLHDQ 207
>gi|430811801|emb|CCJ30726.1| unnamed protein product, partial [Pneumocystis jirovecii]
gi|430813990|emb|CCJ28713.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 254
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 87/155 (56%), Gaps = 4/155 (2%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSV---IEVSSYK 62
+ +PGQ I +++ GG GT + ++ +++ G + + ++SV +++ K
Sbjct: 94 LVLPGQPISPINAA-TGGPGTIIHTSFIRASIPGKIVQSLDSNGQHQISVERLLDMFHRK 152
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
I+P +V R+ ++ ++ VG T R F+ ++R ++V+AT D I++Y
Sbjct: 153 GSSILPEVNAIVLGRVTKIKPKEATVNIFVVGETVCQREFQGIIRIQDVKATSKDTIKIY 212
Query: 123 KCYRPGDIILARLPLKELHSYQLSTAENELGVVIA 157
+RPGDI+ A++ L + SY LSTA+N+LGVV A
Sbjct: 213 AFFRPGDIVRAQISLGDQSSYYLSTAKNDLGVVFA 247
>gi|322693070|gb|EFY84945.1| exosomal core protein CSL4 [Metarhizium acridum CQMa 102]
Length = 246
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 97/175 (55%), Gaps = 17/175 (9%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVED-------NK----- 51
P + +PG I S G GT++ QG + S+L G V + + NK
Sbjct: 45 PSVAVPGN-ILGPASKYNPGPGTHIHQGNVVSSLLGRVRVTAPAKPPGPAKRLNKITAPA 103
Query: 52 --EVSVIEVSSY-KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRR 108
E+ + V+ + +K I+P +VV AR++ + + VG+T L ++ ++R
Sbjct: 104 PEELPTLSVARHGRKREILPDVNNVVLARVVRLMPKQAIVVIQQVGDTVLQTEWQGVIRV 163
Query: 109 ENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
++VRATE D+++MY+ ++PGDI+ A+ + L + +Y LSTA NELGV++A SEA
Sbjct: 164 QDVRATEKDKVKMYESFKPGDIVRAQVISLGDQANYYLSTASNELGVIMATSEAG 218
>gi|390345696|ref|XP_784628.3| PREDICTED: probable ATP-dependent RNA helicase DHX34-like
[Strongylocentrotus purpuratus]
Length = 659
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 94 GNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENEL 152
G + + FR ++R+E++RATE D++E+YK +RPGDI+LAR L L + SY L+TAENEL
Sbjct: 554 GRAGIKKLFRGMIRKEDIRATEKDKVEVYKSFRPGDIVLARVLSLGDAQSYLLTTAENEL 613
Query: 153 GVVIALSEAA 162
GVV+A SEA
Sbjct: 614 GVVLAKSEAG 623
>gi|237836691|ref|XP_002367643.1| 3'-5' exoribonuclease csl4, putative [Toxoplasma gondii ME49]
gi|211965307|gb|EEB00503.1| 3'-5' exoribonuclease csl4, putative [Toxoplasma gondii ME49]
Length = 269
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 19/166 (11%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIE----------- 57
PG+R+ S+ GRGTYV+ ++Y+ + G I+ H + + IE
Sbjct: 70 PGERLSS-TSEYACGRGTYVKDDFIYAAVVGIEQID-HPTPRGQPTTIEGRGGQKRAGGL 127
Query: 58 -----VSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVR 112
V K ++PT G V A++ V +H + +++V L+ FR +R +++R
Sbjct: 128 PVLSVVPFAKSASVLPTTGCFVLAQVAKVARHRVECSILAVDGHTLAEPFRGFIRSQDIR 187
Query: 113 ATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIA 157
T++D +++ +C++PGD++ A+ + + + Y LSTA ELGV+ A
Sbjct: 188 ETDVDSVDVLECFKPGDVVRAKVISMGDGRCYVLSTASAELGVLFA 233
>gi|339234281|ref|XP_003382257.1| 3'-5' exoribonuclease CSL4-like protein [Trichinella spiralis]
gi|316978754|gb|EFV61688.1| 3'-5' exoribonuclease CSL4-like protein [Trichinella spiralis]
Length = 213
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 17 DSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV-IVPTPGDVVT 75
+ +I G G YV GY +++LAG + + K + +V+EV I+P+P VVT
Sbjct: 23 EENIRSGYGCYVAHGYYFASLAGQLKLTK----ENDCAVVEVVRENSSTSILPSPQAVVT 78
Query: 76 ARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE--MYKCYRPGDIILA 133
R+ V K ++ V N L F ++R+ENV + + E MY+C++ GDI+LA
Sbjct: 79 CRVTGVANKYAKCTILMVHNNILPYPFVGIIRKENVYGSAKNETEVSMYECFQEGDIVLA 138
Query: 134 R-LPLKELHSYQLSTAENELGVVIA 157
+ L + SY LST E ELGV +
Sbjct: 139 KVFSLGDSFSYLLSTEELELGVFVG 163
>gi|134081806|emb|CAK42062.1| unnamed protein product [Aspergillus niger]
Length = 204
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 15/185 (8%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVS-SYK 62
P + IPGQR+ + S G GT+V+ +Y+++AG V +++ +K ++ VS +
Sbjct: 6 PTLAIPGQRLGSIAS-YAAGPGTHVQNATIYASIAGPVVVDQAQPSSKAKLILSVSRTGP 64
Query: 63 KEVIVPTPG-----------DVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENV 111
K+ P P VV AR+ VQ+ ++ + + F+AL+R+E+V
Sbjct: 65 KKAAAPAPSTKAYNTLPAVDSVVLARVTRVQKRQATVSILVNHSNSDELRFQALIRKEDV 124
Query: 112 RATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS-LFRSSE 169
RA E DR+ M + +R GDI+ + L + Y L+TA N+LGVV+A SE+ + +F S
Sbjct: 125 RAVEKDRVVMDEMFRVGDIVRGTVISLGDQSFYYLTTARNDLGVVMARSESGNMMFPVSW 184
Query: 170 KLTND 174
K D
Sbjct: 185 KEMRD 189
>gi|523574966|gb|EPR61703.1| putative 3'-5' exoribonuclease csl4 [Toxoplasma gondii GT1]
Length = 269
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 88/165 (53%), Gaps = 17/165 (10%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVS-------------- 54
PG+R+ S+ GRGTYV+ ++Y+ + G I+ + +
Sbjct: 70 PGERLSS-TSEYACGRGTYVKDDFIYAAVVGIEQIDHPTPRGQPTTTEGRAGQKRAGGLP 128
Query: 55 VIEVSSYKKEV-IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRA 113
V+ V + K ++PT G V A++ V +H + +++V L+ FR +R +++R
Sbjct: 129 VLSVVPFAKSASVLPTTGCFVLAQVTKVARHRVECSILAVDGHTLAEPFRGFIRSQDIRE 188
Query: 114 TEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIA 157
T++D +++ +C++PGD++ A+ + + + Y LSTA ELGV+ A
Sbjct: 189 TDVDSVDVLECFKPGDVVRAKVISMGDGRCYVLSTASAELGVLFA 233
>gi|221505209|gb|EEE30863.1| 3'-5' exoribonuclease csl4, putative [Toxoplasma gondii VEG]
Length = 269
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 88/165 (53%), Gaps = 17/165 (10%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVS-------------- 54
PG+R+ S+ GRGTYV+ ++Y+ + G I+ + +
Sbjct: 70 PGERLSS-TSEYACGRGTYVKDDFIYAAVVGIEQIDHPTPRGQPTTTEGRGGQKRAGGLP 128
Query: 55 VIEVSSYKKEV-IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRA 113
V+ V + K ++PT G V A++ V +H + +++V L+ FR +R +++R
Sbjct: 129 VLSVVPFAKSASVLPTTGCFVLAQVTKVARHRVECSILAVDGHTLAEPFRGFIRSQDIRE 188
Query: 114 TEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIA 157
T++D +++ +C++PGD++ A+ + + + Y LSTA ELGV+ A
Sbjct: 189 TDVDSVDVLECFKPGDVVRAKVISMGDGRCYVLSTASAELGVLFA 233
>gi|346319938|gb|EGX89539.1| exosome component 1 [Cordyceps militaris CM01]
Length = 208
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 100/176 (56%), Gaps = 17/176 (9%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSI-------------NKHVED- 49
P + IPG R+ S G GT++ +G + S+L G V+I NK
Sbjct: 7 PTLAIPG-RVLGPVSKYAPGAGTHIFEGNVVSSLMGNVTIIPPSKTPGPAKRLNKITAPV 65
Query: 50 NKEVSVIEVSSY-KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRR 108
+ E+S I V+ + +K I+P ++V AR++ + + VG+T L ++ ++R
Sbjct: 66 SDELSTITVARHGRKREILPDVNNIVLARVVRLMPKQAIVVIQQVGDTVLQTEWQGVIRV 125
Query: 109 ENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
++VRATE D++++Y+ ++PGD++ A+ + L + +Y LSTA NELGV++A SE +
Sbjct: 126 QDVRATEKDKVKIYESFKPGDVVRAQVISLGDQANYYLSTASNELGVIMATSEVGN 181
>gi|402584129|gb|EJW78071.1| hypothetical protein WUBG_11019 [Wuchereria bancrofti]
Length = 241
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 28/181 (15%)
Query: 8 IPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVED------------------ 49
IPG R+ + + G GTY G++Y++LAG + + VE+
Sbjct: 27 IPGDRLFPISEQLKAGIGTYELFGHIYASLAGALHMYATVENLRGHGRVSLREENFNLRE 86
Query: 50 -----NKEVSVIEV---SSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRT 101
+KE ++EV S +K ++P G + TA++ + Q K + V + LS
Sbjct: 87 SNLQRDKETKIVEVRRESEKEKRHVMPYVGCIATAKVQNIGQRFAKCTIHCVECSVLSHE 146
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILARLP--LKELHSYQLSTAENELGVVIALS 159
F +LR+E++ E +++++ +C PGD+ILAR+ HSY LS E+ELGVV +
Sbjct: 147 FNGILRKEDIMPIEKEKVKLDQCIHPGDVILARVIGFGDNQHSYLLSIVEDELGVVSGIG 206
Query: 160 E 160
+
Sbjct: 207 D 207
>gi|320590466|gb|EFX02909.1| exosome complex subunit [Grosmannia clavigera kw1407]
Length = 229
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 39/195 (20%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIE-------- 57
I +PGQ + S V G GT++ G +Y++L G VS+ + E K+ +++
Sbjct: 8 IAVPGQLLGPA-SRFVPGAGTHLADGQVYASLLGHVSVRQPAEAGKKTAMLPKRLTRIMV 66
Query: 58 ------------------------VSSYKKEV-----IVPTPGDVVTARIMAVQQHLCKA 88
VS + + ++P G+ R++ + Q
Sbjct: 67 PSVATKGPDGAAQGSSLADVNKATVSVSRARIAQGGEVLPDVGNTALCRVVRIAQRQAVV 126
Query: 89 HVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLST 147
++ VG+ L ++ ++R ++VRATE DR+++Y+ +RPGDI+ A+ + L + +Y LST
Sbjct: 127 AILVVGDVVLEAEWQGVIRAQDVRATEKDRVKIYESFRPGDIVRAQVISLGDQANYYLST 186
Query: 148 AENELGVVIALSEAA 162
A N LGVV+A SEA
Sbjct: 187 ASNSLGVVMATSEAG 201
>gi|389626809|ref|XP_003711058.1| 3'-5' exoribonuclease CSL4 [Magnaporthe oryzae 70-15]
gi|351650587|gb|EHA58446.1| 3'-5' exoribonuclease CSL4 [Magnaporthe oryzae 70-15]
gi|440466581|gb|ELQ35841.1| 3'-5' exoribonuclease CSL4 [Magnaporthe oryzae Y34]
gi|440486837|gb|ELQ66665.1| 3'-5' exoribonuclease CSL4 [Magnaporthe oryzae P131]
Length = 213
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 24/207 (11%)
Query: 2 SNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVED-------NKEVS 54
+ P + +PGQ + S G GT++ + LYS+L G VSI + + NK V
Sbjct: 5 APPSLALPGQ-LLGPSSRYRAGPGTHIHEANLYSSLLGAVSITQPAKPAGPTKRPNKIVK 63
Query: 55 VIEVSSYKKEVI--------------VPTPGDVVTARIMAVQQHLCKAHVISVGNTALSR 100
+SS E + +P GDVV R+ V ++ VG+ L
Sbjct: 64 PGMLSSSAAENLPTISVQRRRRAAAALPEVGDVVLCRVTRVSHQQAIVAILVVGDAVLDA 123
Query: 101 TFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
++ ++R +VRATE DR+++ + +RPGDI+ A+ + L + +Y L+TA NELGV++A S
Sbjct: 124 EWQGVIRVRDVRATEKDRVKIGESFRPGDIVRAQVISLGDQANYYLTTASNELGVIMANS 183
Query: 160 EAAS-LFRSSEKLTNDIEFLKQEKLKL 185
+A + ++ S K D E E K+
Sbjct: 184 DAGNPMYPVSWKEYKDPETGLSEPRKV 210
>gi|399170709|emb|CCE28671.1| probable CSL4-core component of the 3`-5` exosome [Claviceps
purpurea 20.1]
Length = 208
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 109/200 (54%), Gaps = 18/200 (9%)
Query: 3 NPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVED-------NK---- 51
P + IPGQ I S + G GT++ Q + S++ G V+I ++ NK
Sbjct: 6 TPSVAIPGQ-ILGPSSKYLAGPGTHIYQDSVASSILGRVTITVPIKPPGPAKRLNKITAP 64
Query: 52 ---EVSVIEVSSY-KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLR 107
E + I V+ + +K I+P +VV AR++ + + VG+T L ++ ++R
Sbjct: 65 APEERATISVARHGRKREILPDVQNVVLARVVRLMPKQAIVVIQQVGDTVLQTEWQGVIR 124
Query: 108 RENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS-LF 165
++VRATE D++++++ ++PGDI+ A+ + L + +Y LSTA NELGV++A SEA + +
Sbjct: 125 VQDVRATEKDKVKIHESFKPGDIVKAQVISLGDQANYYLSTASNELGVIMATSEAGNDMV 184
Query: 166 RSSEKLTNDIEFLKQEKLKL 185
S K D E E K+
Sbjct: 185 PVSWKEYKDPETGASEPRKV 204
>gi|339234287|ref|XP_003382260.1| 3'-5' exoribonuclease CSL4-like protein [Trichinella spiralis]
gi|316978751|gb|EFV61686.1| 3'-5' exoribonuclease CSL4-like protein [Trichinella spiralis]
Length = 568
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 77/143 (53%), Gaps = 8/143 (5%)
Query: 19 DIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV-IVPTPGDVVTAR 77
+I G G YV GY +++LAG + + K + +V+EV I+P+P VVT R
Sbjct: 380 NIRSGYGCYVAHGYYFASLAGQLKLTK----ENDCAVVEVVRENSSTSILPSPQAVVTCR 435
Query: 78 IMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE--MYKCYRPGDIILAR- 134
+ V K ++ V N L F ++R+ENV + + E MY+C++ GDI+LA+
Sbjct: 436 VTGVANKYAKCTILMVHNNILPYPFVGIIRKENVYGSAKNETEVSMYECFQEGDIVLAKV 495
Query: 135 LPLKELHSYQLSTAENELGVVIA 157
L + SY LST E ELGV +
Sbjct: 496 FSLGDSFSYLLSTEELELGVFVG 518
>gi|470308003|ref|XP_004363730.1| hypothetical protein CAOG_02891 [Capsaspora owczarzaki ATCC 30864]
gi|320167986|gb|EFW44885.1| hypothetical protein CAOG_02891 [Capsaspora owczarzaki ATCC 30864]
Length = 231
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 67 VPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYR 126
+P G+VVTA + ++ K +++ VG++ L F ++R ++VR TE D++EMYK +R
Sbjct: 107 IPAIGNVVTATVTSITSRFAKVNILCVGSSPLREPFHGMIRIQDVRETEKDKVEMYKSFR 166
Query: 127 PGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
PGDI+ A + L + SY L+T++N+LGVV A S A +
Sbjct: 167 PGDIVRAEVISLGDSRSYFLATSKNDLGVVFAESAAGA 204
>gi|400596719|gb|EJP64475.1| exosome component EXOSC1/CSL4 [Beauveria bassiana ARSEF 2860]
Length = 208
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 99/175 (56%), Gaps = 17/175 (9%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSI-------------NK-HVED 49
P + IPG R+ S G GT++ +G + S+L G V++ NK
Sbjct: 7 PSLAIPG-RVLGPVSKYAPGAGTHIFEGNVVSSLMGNVTVMPPAKAPGPAKRLNKLTAPS 65
Query: 50 NKEVSVIEVSSY-KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRR 108
+ E+S I V+ + +K I+P ++V AR++ + + VG+T L ++ ++R
Sbjct: 66 SDELSTITVARHGRKREILPDVNNIVLARVVRLMPKQAIVVIQQVGDTVLQTEWQGVIRV 125
Query: 109 ENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
++VRATE D++++ + ++PGDI+ A+ + L + +Y LSTA N+LGV++A SEA
Sbjct: 126 QDVRATEKDKVKISESFKPGDIVRAQVISLGDQANYYLSTASNDLGVIMATSEAG 180
>gi|310794374|gb|EFQ29835.1| exosome component EXOSC1/CSL4 [Glomerella graminicola M1.001]
Length = 211
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 95/179 (53%), Gaps = 20/179 (11%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHV---------------- 47
P +PG +I + G GT+V G + ++L G V++
Sbjct: 7 PQTAVPG-KILGPTTRYAAGPGTHVYNGNVVASLLGDVTVTPSAKAQTGLTKRLNRITQL 65
Query: 48 --EDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRAL 105
++ +SV + KK ++P G++V R++ + + VG+T L ++ +
Sbjct: 66 SADELATISVARRGTSKKREVLPDVGNMVLCRVVRLMPKQAIVTIQQVGDTVLQTEWQGV 125
Query: 106 LRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
+R ++VRATE D++++Y+ ++PGD++ A+ + L + +Y LSTA NELGV++A SEA +
Sbjct: 126 IRSQDVRATEKDKVKIYESFKPGDVVRAQVISLGDQANYYLSTAANELGVIMATSEAGN 184
>gi|348673547|gb|EGZ13366.1| hypothetical protein PHYSODRAFT_510564 [Phytophthora sojae]
Length = 168
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+ +PGQR+ D + G G YVR G +Y+++ G I++ V +EVS K V
Sbjct: 7 VAVPGQRLAAADGKLKAGSGAYVRDGAIYASICGKWRISQDV--------VEVSRAGKTV 58
Query: 66 I---VPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
V GDVV R+ + ++ VG T L F +R E+VR +ID++ M
Sbjct: 59 ASAQVLRLGDVVICRVAKIMSRQVMVDILCVGETVLKEAFPGTIRLEDVRNHDIDKLVME 118
Query: 123 KCYRPGDII-LARLPLKELHSYQLSTAENELGVV 155
+ + PG ++ A L + SY LSTA+ LGVV
Sbjct: 119 EVFSPGMLVKAAVLSFGDTRSYFLSTAKPGLGVV 152
>gi|512189969|gb|EPE05734.1| 3 -5 exoribonuclease csl4 [Ophiostoma piceae UAMH 11346]
Length = 223
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 34/191 (17%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAG-------------------------- 39
I +PGQ + S + G GT++ G +Y++L G
Sbjct: 7 ITVPGQHLGAA-SQYIPGPGTHLSDGQVYASLLGHTQIRQPAPVAAGAASAAAGPAKRLT 65
Query: 40 ------TVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISV 93
S+ V+ VSV + + ++P G+ V R+ + Q ++ V
Sbjct: 66 RIVVPTAASLTPVVDRRATVSVSRAALAEGGEVLPDVGNTVLCRVTRLTQKQAVVAILVV 125
Query: 94 GNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENEL 152
G T L+ ++ L+R ++VRATE DR+++Y+ +RPGDI+ A+ + L + +Y LSTA N L
Sbjct: 126 GETVLTTEWQGLIRAQDVRATEKDRVKVYESFRPGDIVRAQVISLGDQANYYLSTASNTL 185
Query: 153 GVVIALSEAAS 163
GVV+A SE S
Sbjct: 186 GVVMATSETGS 196
>gi|517313454|emb|CCT65658.1| probable CSL4-core component of the 3`-5` exosome [Fusarium
fujikuroi IMI 58289]
Length = 208
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 100/177 (56%), Gaps = 19/177 (10%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVED-------------- 49
P + +PG + + + G GT+V G + S+L G V++ +
Sbjct: 7 PSVALPGNILGPV-TKFAPGPGTHVYGGNVVSSLLGRVTVTPPAKTPGPQKRLNKITAPT 65
Query: 50 NKEVSVIEVS--SYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLR 107
+E++ I V+ +K+E I+P ++V AR++ + + VG+T L ++ ++R
Sbjct: 66 TEELATISVARHGHKRE-ILPDVENIVLARVLRLMPKQAIVVIQQVGDTVLQTEWQGVIR 124
Query: 108 RENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
++VRATE D++++Y+ ++PGDI+ A+ + L + +Y LSTA NELGVV+A SEA +
Sbjct: 125 VQDVRATEKDKVKIYESFKPGDIVRAQVISLGDQANYYLSTASNELGVVMATSEAGN 181
>gi|256071809|ref|XP_002572231.1| 3'-5' exonuclease [Schistosoma mansoni]
gi|350644785|emb|CCD60492.1| 3'-5' exoribonuclease csl4-related [Schistosoma mansoni]
Length = 257
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 3/130 (2%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+ +PG I LD + G TY G + S+ G V H + K SV + K
Sbjct: 6 VVVPGDVISPLDINKKSGPSTYCCSGNILSSAFGYVKEESHTDGTKTFSVAPL---KTPG 62
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
IVP G +V A++ ++ + + ++++G L+ F+ L+RRE++RAT+ D+ E C+
Sbjct: 63 IVPYTGSIVLAKVSSITRRFVRCDIVAIGEVYLAGPFKGLIRREDIRATQRDQAEPGCCF 122
Query: 126 RPGDIILARL 135
RPGDI+ AR+
Sbjct: 123 RPGDIVRARV 132
>gi|472584705|gb|EMS22291.1| exosome complex component CSL4 [Rhodosporidium toruloides NP11]
Length = 184
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Query: 6 ICIPGQRICQ--LDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKK 63
+ +PGQ + + + G GT++R G +Y+ L G VS +E V+ V ++
Sbjct: 4 LVLPGQPLSTQTTGATLAAGPGTWIRGGQVYAALVGEVS--------REGGVLSVKGKEE 55
Query: 64 EVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYK 123
+P P +V + + + +++V F ++R ++VR T D ++++
Sbjct: 56 TQAIPEPNAIVIGTVSRITRQAATLSLLTVDGRPCRPDFTGIIRSQDVRQTAKDSVKIWS 115
Query: 124 CYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
C+RPGD++ A+ + L + SY LSTA N LGV+ A+S
Sbjct: 116 CFRPGDVVRAKVISLGDSRSYFLSTAANSLGVLFAVS 152
>gi|477531024|gb|ENH82749.1| 3 -5 exoribonuclease csl4 [Colletotrichum orbiculare MAFF 240422]
Length = 217
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 26/184 (14%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKH---------------VE 48
P IPG+ + S + G GT+V G + ++L G V++
Sbjct: 7 PQTAIPGKTLGP-SSRYIAGPGTHVYNGNVVASLLGQVTVTASPKAPSGPVKRLNRITAP 65
Query: 49 DNKEVSVIEVS---------SYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALS 99
E+ I V+ S KK ++P G+VV R++ + + VG T L
Sbjct: 66 SADELPTISVAPRQASAGNGSSKKREVLPDVGNVVLCRVVRLMPKQAIVTIQQVGETVLQ 125
Query: 100 RTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIAL 158
++ ++R ++VRATE D++++Y+ ++PGD++ A+ + L + +Y LSTA NELGV++A
Sbjct: 126 TEWQGVIRSQDVRATEKDKVKIYESFKPGDVVRAQVISLGDQANYYLSTASNELGVIMAT 185
Query: 159 SEAA 162
SEA
Sbjct: 186 SEAG 189
>gi|367038801|ref|XP_003649781.1| hypothetical protein THITE_2074474 [Thielavia terrestris NRRL 8126]
gi|346997042|gb|AEO63445.1| hypothetical protein THITE_2074474 [Thielavia terrestris NRRL 8126]
Length = 230
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 37/211 (17%)
Query: 2 SNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVE------------- 48
+ P + IPGQ + S + G GT++ + LYS+L G V I +
Sbjct: 8 AAPTLVIPGQ-LLGPASRFLPGPGTHLHESNLYSSLLGQVHITQPARRPAPAQPGPAKRL 66
Query: 49 ---------DNKEVSVIEVSSY------------KKEVIVPTPGDVVTARIMAVQQHLCK 87
E+ I V+ K+ ++P G++V R++ +
Sbjct: 67 TKITPAPAPAPAELPTISVAPARAAGAGAGAGAGKRREVLPEVGNIVLCRVIRITPRQAV 126
Query: 88 AHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLS 146
++ G++ L ++ L+R +++RATE DR+++Y+ +RPGDI+ A + L + +Y LS
Sbjct: 127 VAILVCGDSVLEADWQGLIRVQDIRATEKDRVKVYESFRPGDIVRAEVISLGDQANYYLS 186
Query: 147 TAENELGVVIALSEAA-SLFRSSEKLTNDIE 176
TA NELGV++A SEA +++ S K D E
Sbjct: 187 TARNELGVILATSEAGNTMYPVSWKEFRDPE 217
>gi|358389682|gb|EHK27274.1| hypothetical protein TRIVIDRAFT_114665, partial [Trichoderma virens
Gv29-8]
Length = 529
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 98/175 (56%), Gaps = 21/175 (12%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSI-------------NK----H 46
P + IPG I S G GT++ +G + S+L G V++ NK
Sbjct: 7 PSLAIPGT-ILGPASKYASGPGTHIYEGSIVSSLLGNVAVIAPAKAPGPVKRLNKITAPS 65
Query: 47 VEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALL 106
VE+ +SVI K+EV+ P G++V AR++ + + VG T L ++ ++
Sbjct: 66 VEELATISVIR-RGRKREVL-PDVGNIVLARVVRLMPKQAIVVIQQVGETVLQTEWQGVI 123
Query: 107 RRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
R ++VRATE D++++++ ++PGDI+ A+ + L + +Y LSTA NELGV++A S+
Sbjct: 124 RVQDVRATEQDKVKIHESFKPGDIVRAQVISLGDQANYYLSTASNELGVIMATSD 178
>gi|367025787|ref|XP_003662178.1| hypothetical protein MYCTH_2302465 [Myceliophthora thermophila ATCC
42464]
gi|347009446|gb|AEO56933.1| hypothetical protein MYCTH_2302465 [Myceliophthora thermophila ATCC
42464]
Length = 240
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 56/229 (24%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHV---------------E 48
P + IPGQ + S G GT++ LY++L G V +++
Sbjct: 6 PAVAIPGQ-LLGPASRYQPGPGTHLHGANLYASLLGQVHVSQPARAPGPAKRLTKITPAP 64
Query: 49 DNKEVSVIEVSSYK-----------------------------KEVIVPTPGDVVTARIM 79
E+ I VS+ + K ++P G+VV R++
Sbjct: 65 APAELPTISVSAPRLSSSSSSRVGGGAAAAAGCGAEGEGRRKMKREVLPEVGNVVLCRVL 124
Query: 80 AVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLK 138
+ ++ G+T L ++ L+R ++VRATE DR+++Y+ +RPGDI+ A + L
Sbjct: 125 RITPRQAVVAILVCGDTVLDAEWQGLIRVQDVRATEKDRVKIYESFRPGDIVRAEVISLG 184
Query: 139 ELHSYQLSTAENELGVVIALSEAASL--------FRSSEKLTNDIEFLK 179
+ +Y LSTA+NELGVV+A+SEA + FR E T IE K
Sbjct: 185 DQTNYYLSTAKNELGVVLAVSEAGNTMQPVSWKEFRDPE--TGAIELRK 231
>gi|156058488|ref|XP_001595167.1| hypothetical protein SS1G_03256 [Sclerotinia sclerotiorum 1980]
gi|154701043|gb|EDO00782.1| hypothetical protein SS1G_03256 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 211
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAG---TVSINKHVEDNKEVSVIEVSS 60
P + +PGQ + S+ + G GT++ LY+++ G TV+ K K + I ++
Sbjct: 7 PLVAVPGQLLGS-SSEYLPGPGTHIHSSNLYASILGPIKTVAPPKPSYPQKRATKITPAA 65
Query: 61 Y---------------KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRAL 105
K I+P V R+ + ++ VG T L ++ L
Sbjct: 66 LVPLSTVSIERATVTGDKAEIIPEVNSTVLCRVTRITPRQATVAILVVGETVLEGEWQGL 125
Query: 106 LRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSEAA-S 163
+R ++VRATE D++++++ +RPGDI+ A + L + +Y LSTA NELGV++A SEA +
Sbjct: 126 IRVQDVRATEKDKVKIFESFRPGDIVRAVVISLGDQSNYYLSTARNELGVIMATSEAGNA 185
Query: 164 LFRSSEKLTNDIEFLKQEKLKLYEEL 189
++ S K D E E K+ +
Sbjct: 186 MYPVSWKEYKDPETGSSESRKVAKPF 211
>gi|302416711|ref|XP_003006187.1| 3'-5' exoribonuclease CSL4 [Verticillium albo-atrum VaMs.102]
gi|261355603|gb|EEY18031.1| 3'-5' exoribonuclease CSL4 [Verticillium albo-atrum VaMs.102]
Length = 211
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 93/178 (52%), Gaps = 20/178 (11%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEV---------- 53
P +PG + S G GT++ +G + S+L G V+++ N
Sbjct: 7 PQTAVPGTALGPA-SRYRSGAGTHIHEGIIVSSLLGRVTVDTPASANGPAKRLTRIAGVL 65
Query: 54 ------SVIEVSSY--KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRAL 105
+ I VS + KK +P ++V R++ + + VG+T L ++ +
Sbjct: 66 NSPADRATISVSRHGGKKREALPDVSNIVLCRVLRLMPRQAIVSIQQVGDTVLQTEWQGV 125
Query: 106 LRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
+R ++VRATE D+I++++ ++PGDI+ A+ + L + +Y LSTA NELGV++A SEA
Sbjct: 126 IRSQDVRATEKDKIKIHEAFKPGDIVKAQVISLGDQANYYLSTASNELGVIMATSEAG 183
>gi|358401392|gb|EHK50698.1| hypothetical protein TRIATDRAFT_279999 [Trichoderma atroviride IMI
206040]
Length = 208
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 98/178 (55%), Gaps = 21/178 (11%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSI-------------NK----H 46
P + IPG I V G GT++ G + S+L G V++ NK
Sbjct: 7 PSLAIPGT-ILGPAGKYVSGPGTHIYGGNIVSSLLGNVNVTAPAKAPGPTKRLNKITAPS 65
Query: 47 VEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALL 106
VE+ +SVI K+EV+ P G+ V AR++ + + VG+T L ++ ++
Sbjct: 66 VEELSTISVIR-RGRKREVL-PDVGNTVLARVVRLMPKQAIVVIQQVGDTVLQTEWQGVI 123
Query: 107 RRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
R ++VRATE D++++++ ++PGDI+ A+ + L + +Y LSTA NELGV++A S+ +
Sbjct: 124 RVQDVRATEQDKVKIHESFKPGDIVRAQVISLGDQANYYLSTASNELGVIMATSDVGN 181
>gi|296420097|ref|XP_002839617.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635800|emb|CAZ83808.1| unnamed protein product [Tuber melanosporum]
Length = 206
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 84/172 (48%), Gaps = 14/172 (8%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKK 63
PPI +PGQ + Q G GTY Q + + +V+ V +K VSV S
Sbjct: 8 PPIALPGQPLAQ-SPPYAAGPGTYTTQNPTRTVITASVAGIPRVHADKSVSVTRPSPSHP 66
Query: 64 EVIVPTPGDVVTAR------------IMAVQQHLCKAHVISVGNTALSRTFRALLRRENV 111
+++P V AR I A+Q H G TF+ ++R ++V
Sbjct: 67 LLLLPEVASTVLARVTRLNPRQATVEIFAIQGGGDGIHGGGDGGCVCEHTFQGVIRAQDV 126
Query: 112 RATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSEAA 162
RATE DRI+M + +R GD++ A + L + +Y LSTA N LGVV+A S+A
Sbjct: 127 RATEKDRIKMLESFRVGDVVRAVVISLGDQSNYYLSTASNSLGVVVAHSDAG 178
>gi|154310662|ref|XP_001554662.1| hypothetical protein BC1G_06805 [Botryotinia fuckeliana B05.10]
gi|347839438|emb|CCD54010.1| similar to 3'-5' exoribonuclease CSL4 [Botryotinia fuckeliana T4]
gi|472243510|gb|EMR88163.1| putative 3 -5 exoribonuclease csl4 protein [Botryotinia fuckeliana
BcDW1]
Length = 209
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 21/206 (10%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAG---TVSINKHVEDNKEVSVIEVSS 60
P + +PGQ + S+ + G GT++ LY+++ G TV+ K K + I ++
Sbjct: 5 PLVAVPGQLLGS-SSEYLPGPGTHIHSSNLYASILGPIKTVAPPKPSYPQKRATKITPAA 63
Query: 61 Y---------------KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRAL 105
K I+P V R+ + ++ VG T L ++ L
Sbjct: 64 PVPLSTISIERATLTGDKAEILPEVNSTVLCRVTRITPRQATVAILVVGETVLEGEWQGL 123
Query: 106 LRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSEAA-S 163
+R ++VRATE D++++++ +RPGDI+ A + L + +Y LSTA+NELGV++A SEA +
Sbjct: 124 IRVQDVRATEKDKVKIFESFRPGDIVRAVVISLGDQSNYYLSTAKNELGVIMATSEAGNA 183
Query: 164 LFRSSEKLTNDIEFLKQEKLKLYEEL 189
++ S K D E E K+ +
Sbjct: 184 MYPVSWKEYKDPETGASESRKVAKPF 209
>gi|301093486|ref|XP_002997589.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110552|gb|EEY68604.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 168
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 2 SNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
S+ I +PGQ + +DS + G GTYVR +++++ G +++ V+EV+
Sbjct: 3 SSSDIAVPGQHLAAVDSKLKAGTGTYVRDNVIFASIYGKWRVSQ--------DVVEVTRA 54
Query: 62 KKEVI---VPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDR 118
K V V GD+V R++ + ++ VG T L F +R E+VR +ID+
Sbjct: 55 NKTVASAQVLRLGDIVICRVVKITSRQVMVDILCVGETVLKEVFPGTIRLEDVRNHDIDK 114
Query: 119 IEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVV 155
+ M + + PG ++ A L + SY LSTA+ LGVV
Sbjct: 115 LVMDEVFSPGMLVKATVLSFGDTRSYYLSTAKPGLGVV 152
>gi|429861888|gb|ELA36551.1| exosomal core protein csl4 [Colletotrichum gloeosporioides Nara
gc5]
Length = 238
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 95/182 (52%), Gaps = 24/182 (13%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDN------------- 50
P +PG+ + S G GT++ G + ++L G V + + +
Sbjct: 7 PQTAVPGKALGST-SRYAAGPGTHIYNGNVVASLMGKVKVTPSAKASTGPAKRLTRITAL 65
Query: 51 -----KEVSVI----EVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRT 101
+SV+ + + KK ++P G+VV R++ + + VG+T L
Sbjct: 66 PADELPTLSVVPRQAQANGDKKREVLPDVGNVVLCRVVRLMPKQAIVTIQQVGDTVLQTE 125
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
++ ++R ++VRATE D++++Y+ ++PGDI+ A+ + L + +Y LSTA NELGV++A SE
Sbjct: 126 WQGVIRSQDVRATEKDKVKIYESFKPGDIVRAQVISLGDQANYYLSTASNELGVIMATSE 185
Query: 161 AA 162
A
Sbjct: 186 AG 187
>gi|512204390|gb|EPE33213.1| hypothetical protein GLAREA_06225 [Glarea lozoyensis ATCC 20868]
Length = 217
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 29/212 (13%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTV-----------------------S 42
+ +PGQ + S+ + G GT++ L++++ G + +
Sbjct: 7 VAVPGQ-LLGAASEYLPGPGTHIHDSKLFASILGPIKTTSPPKPAGPQKRLTKITPAAPA 65
Query: 43 INKHVEDNKEVSV---IEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALS 99
+ V +++SV ++ S K I+P V R+ +Q ++ VG T L
Sbjct: 66 VLPTVSIERDISVGSGLDGSGKSKAEILPEVNSTVLCRVTRIQPRQASVAILVVGETVLD 125
Query: 100 RTFRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIAL 158
++ L+R ++VRATE D++++++ +RPGDI+ A + L + +Y LSTA N LGV++A
Sbjct: 126 GEWQGLIRVQDVRATEKDKVKIFESFRPGDIVRAVVISLGDQSNYYLSTASNNLGVIMAT 185
Query: 159 SEAA-SLFRSSEKLTNDIEFLKQEKLKLYEEL 189
SEA S++ S K D E E K+ +
Sbjct: 186 SEAGNSMYPVSWKEYRDPETGASESRKVAKPF 217
>gi|346974230|gb|EGY17682.1| 3'-5' exoribonuclease CSL4 [Verticillium dahliae VdLs.17]
Length = 306
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 93/178 (52%), Gaps = 20/178 (11%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEV---------- 53
P +PG + S G GT++ +G + S+L G V+++ N
Sbjct: 7 PQTAVPGTALGPA-SRYRSGAGTHIHEGIVVSSLLGRVTVDTPASANGPAKRLTRIAGVL 65
Query: 54 ------SVIEVSSY--KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRAL 105
+ I VS + KK +P ++V R++ + + VG+T L ++ +
Sbjct: 66 NSPADRATISVSRHGGKKREALPDVSNIVLCRVLRLMPRQAIVSIQQVGDTVLQTEWQGV 125
Query: 106 LRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
+R ++VRATE D+I++++ ++PGDI+ A+ + L + +Y LSTA NELGV++A SEA
Sbjct: 126 IRSQDVRATEKDKIKIHEAFKPGDIVKAQVISLGDQANYYLSTASNELGVIMATSEAG 183
>gi|148709922|gb|EDL41868.1| exosome component 1, isoform CRA_c [Mus musculus]
Length = 164
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 80/163 (49%), Gaps = 49/163 (30%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG + +N V V+ V
Sbjct: 13 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCL---MKTSENGAVPVVSVMRE 68
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G VVT CK +E+
Sbjct: 69 TESQLLPDVGAVVT----------CK-------------------------------VEI 87
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 88 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 130
>gi|358340355|dbj|GAA48265.1| exosome complex component CSL4 [Clonorchis sinensis]
Length = 297
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 57/82 (69%)
Query: 54 SVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRA 113
+V+E+ K +VP G +V A++ ++ + + + V++VGNT L+ FR +LRRE++RA
Sbjct: 89 TVVELVPLKAPGVVPYAGAIVLAKVSSLSRRIVRCDVVAVGNTPLAGPFRGMLRREDIRA 148
Query: 114 TEIDRIEMYKCYRPGDIILARL 135
T+ D+ E +CYRPGD+I AR+
Sbjct: 149 TQRDQAEPAQCYRPGDLIRARV 170
>gi|402082259|gb|EJT77404.1| 3'-5' exoribonuclease CSL4 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 219
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 96/186 (51%), Gaps = 23/186 (12%)
Query: 23 GRGTYVRQGYLYSTLAGTVSINKHVED-------NKEVSVIEVSSYKKEVI--------- 66
G GT+V + LY++L G + +++ + N+ V+ + S VI
Sbjct: 31 GPGTHVHESNLYASLLGAIHVSQPPKPAGPAKRPNRIVAAVAPPSSSLPVISVSREPQQR 90
Query: 67 -----VPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+P G++V R+ + ++++G+ L ++ ++R +VRATE DR+ +
Sbjct: 91 RSAKVLPDVGNLVLCRVTRISYAQAIVSILAIGDAVLDAEWQGVIRVRDVRATEKDRVRI 150
Query: 122 YKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA-SLFRSSEKLTNDIEFLK 179
++ +RPGDI+ A+ + L + +Y LSTA NELGV++A SEA ++ S K D E
Sbjct: 151 HESFRPGDIVRAQVISLGDQANYYLSTASNELGVIMATSEAGNPMYPVSWKEYKDPETGL 210
Query: 180 QEKLKL 185
E K+
Sbjct: 211 SEPRKV 216
>gi|257096005|ref|NP_001158033.1| exosome complex component CSL4 isoform 2 [Mus musculus]
gi|12833277|dbj|BAB22465.1| unnamed protein product [Mus musculus]
Length = 154
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 80/163 (49%), Gaps = 49/163 (30%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG + +N V V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCL---MKTSENGAVPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G VVT CK +E+
Sbjct: 59 TESQLLPDVGAVVT----------CK-------------------------------VEI 77
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 78 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 120
>gi|242066968|ref|XP_002454773.1| hypothetical protein SORBIDRAFT_04g037080 [Sorghum bicolor]
gi|241934604|gb|EES07749.1| hypothetical protein SORBIDRAFT_04g037080 [Sorghum bicolor]
Length = 155
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 20 IVGGRGTYVRQGYLYSTLAGTVSINKHVE-DNKEVSVIEVSSYKKEVIVPTPGDVVTARI 78
+ GRG Y + +++ G I + + S +EV +K VP PG VV AR+
Sbjct: 28 LAAGRGAYADGRSVRASVTGRRRIVPPAPGSDDQRSTVEVVGHKAHGAVPQPGSVVIARV 87
Query: 79 MAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILA 133
V + A ++ V + A+ F ++R+++VRATEID+++MY+ YRPGDI+ A
Sbjct: 88 TKVMARMASADIMCVDSKAIKEKFTGMIRQQDVRATEIDKVDMYQSYRPGDIVKA 142
>gi|255953285|ref|XP_002567395.1| Pc21g03310 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589106|emb|CAP95228.1| Pc21g03310 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 243
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 54/215 (25%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAG---------------TVSINKHVE 48
PPI IPGQR+ L S G GT+V+Q ++Y+++AG T+ +++ +
Sbjct: 5 PPIAIPGQRLGPL-STYSAGPGTHVQQSFIYASIAGPVVADPAQPKSQTRPTLRVSRGIP 63
Query: 49 DNKEVS----VIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTAL------ 98
+ S V V+S + +P +V AR+ VQ+ ++ V + +
Sbjct: 64 SKDQASSNPAVPAVTSKPRYNTLPAVDSIVLARVTRVQKRQATVSILVVLDESATQSQDQ 123
Query: 99 SRT---------------------------FRALLRRENVRATEIDRIEMYKCYRPGDII 131
SRT F+AL+R+E+VRA E DR+ M + +R GDI+
Sbjct: 124 SRTASDNDNVASILTSAANPENHSSTDELRFQALIRKEDVRAVEKDRVVMDEMFRVGDIV 183
Query: 132 LAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
+ L + Y ++TA N+LGVV+A S+A ++
Sbjct: 184 RGSVISLGDQSFYYITTARNDLGVVMARSDAGNMM 218
>gi|406866517|gb|EKD19557.1| exosomal core protein CSL4 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 214
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 28/210 (13%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVS---INKHVEDNKEVSVI------ 56
I IPGQ + L S+ + G G +V LY+++ G VS K K ++ I
Sbjct: 7 IAIPGQ-VLGLTSEYLPGPGVHVHNSTLYASILGPVSKTVPPKPAGPQKRLTKITPAAPV 65
Query: 57 ---------------EVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRT 101
E + KKE I+P V R+ + ++ VG T L
Sbjct: 66 ALPTLSIERNFTTAGESGTGKKE-ILPEVNSTVLCRVTRIAPRQATVAILVVGETVLDGE 124
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
++ ++R ++VRATE D++++++ +RPGDI+ A + L + +Y LSTA N LGV++A SE
Sbjct: 125 WQGIIRVQDVRATEKDKVKIFESFRPGDIVRANVVSLGDQSNYYLSTATNSLGVIMATSE 184
Query: 161 AAS-LFRSSEKLTNDIEFLKQEKLKLYEEL 189
A + ++ S K D + E K+ +
Sbjct: 185 AGNPMYPVSWKEYRDPDTGASESRKVAKPF 214
>gi|504135151|ref|XP_004580060.1| PREDICTED: exosome complex component CSL4 isoform X2 [Ochotona
princeps]
Length = 154
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 49/163 (30%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-TPGSGTYTRHGYIFSSLAGCLT---KTSENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT CK +E+
Sbjct: 59 TESQLLPDVGAIVT----------CK-------------------------------VEI 77
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 78 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 120
>gi|224030371|gb|ACN34261.1| unknown [Zea mays]
gi|413939467|gb|AFW74018.1| hypothetical protein ZEAMMB73_791647 [Zea mays]
gi|413939468|gb|AFW74019.1| hypothetical protein ZEAMMB73_791647 [Zea mays]
Length = 188
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 20 IVGGRGTYVRQGYLYSTLAGTVSINKHVE-DNKEVSVIEVSSYKKEVIVPTPGDVVTARI 78
+ GRG Y + +++ G I + + S +EV +K VP PG VV AR+
Sbjct: 27 LAAGRGAYADGRSVRASVTGRRRIVPPAPGSDDQRSTVEVVGHKAHGAVPQPGSVVIARV 86
Query: 79 MAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILARL--- 135
V + A ++ V + A+ F ++R+++VRATEID+++MY+ YRPGDI+ A +
Sbjct: 87 TKVMARMASADIMCVDSKAIREKFTGMIRQQDVRATEIDKVDMYQSYRPGDIVKAMVVSL 146
Query: 136 ----PLKELHSYQLSTAENELGVVIALSEAASLFRSSEKLTN 173
++ S S + LG ++AL + S F S N
Sbjct: 147 IDENDAVQIISVFFSCYQPWLG-LLALRLSTSTFLSCRNFLN 187
>gi|303277897|ref|XP_003058242.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460899|gb|EEH58193.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 196
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 86/160 (53%), Gaps = 8/160 (5%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEV-SVIEV----SS 60
+C PG+R+ + + + G GTYVR ++ + + G + +D ++ IEV ++
Sbjct: 7 VC-PGERL-RFAEEFLPGPGTYVRDKHVLAAVVGDARVVPAADDAEDRRPTIEVVRRGTA 64
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE 120
+++P GD V A++ L ++ V A + F ++R +RA+E ++
Sbjct: 65 RVGGLLLPQIGDEVFAKVTRTNPKLANVEIVCVNGLACADPFNGIVRVSEIRASETAELD 124
Query: 121 MYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
++ C+ PGDII R + L + SY +STAENELGVV A S
Sbjct: 125 LHDCFVPGDIIRGRIISLGDARSYYVSTAENELGVVRARS 164
>gi|354471140|ref|XP_003497801.1| PREDICTED: exosome complex component CSL4-like isoform 2
[Cricetulus griseus]
Length = 154
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 49/163 (30%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLT---KTSENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G VVT CK +E+
Sbjct: 59 TESQLLPDVGAVVT----------CK-------------------------------VEI 77
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 78 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 120
>gi|507572763|ref|XP_004669970.1| PREDICTED: exosome complex component CSL4 isoform X2 [Jaculus
jaculus]
Length = 154
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 49/163 (30%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ +N + VI V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLT---KTSENGALPVISVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT CK +E+
Sbjct: 59 TESRLLPDVGAIVT----------CK-------------------------------VEI 77
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 78 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 120
>gi|255071805|ref|XP_002499577.1| predicted protein [Micromonas sp. RCC299]
gi|226514839|gb|ACO60835.1| predicted protein [Micromonas sp. RCC299]
Length = 202
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 17/173 (9%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKE----VSVI 56
M+ P +PG+ + D ++ G GTYVR + + + G +D + V VI
Sbjct: 1 MTAP--VLPGEPLRHAD-EVRSGPGTYVRGKSVVAAVMGHARTTPAADDADDKRPLVEVI 57
Query: 57 -------EVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTAL--SRTFRALLR 107
+ + ++P GD V AR++ + +++V A+ + F+ ++R
Sbjct: 58 KGPVVTGDATGRGGGTLLPEVGDEVFARVLRINPRQVWCEIVAVNGKAVNDASGFQGIVR 117
Query: 108 RENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
+++VRATEID+++MY+ + P D+I A+ L L + SY L+TA NELGVV A S
Sbjct: 118 QQDVRATEIDKVDMYESFLPADVIRAKVLSLGDQRSYYLTTARNELGVVQAKS 170
>gi|485624945|gb|EOD20904.1| hypothetical protein EMIHUDRAFT_65272 [Emiliania huxleyi CCMP1516]
gi|485630068|gb|EOD25346.1| hypothetical protein EMIHUDRAFT_73908 [Emiliania huxleyi CCMP1516]
Length = 207
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 79/153 (51%), Gaps = 4/153 (2%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNK-EVSVIEVSSYKKEVIV 67
PG R+ D V G G + L++++AGTVS+++ E + VS + S
Sbjct: 18 PGLRLADA-PDAVCGEGVHRWDTGLHASIAGTVSLDRSCEPPRLSVSALTAPSEPAAAPP 76
Query: 68 PTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRP 127
T GD+VT R++ + L ++ V L LLRRE+VR E D + M RP
Sbjct: 77 -TVGDIVTCRVIRINPRLASLEILCVAGVPLREPCGGLLRREDVREFERDAVLMRDSCRP 135
Query: 128 GDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
GDI+ AR L L + +Y ++TA ELGVV A S
Sbjct: 136 GDIVQARVLSLGDSRAYYVTTASEELGVVFARS 168
>gi|444708223|gb|ELW49315.1| Exosome complex component CSL4 [Tupaia chinensis]
Length = 126
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 15/117 (12%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIP G GTY R GY++S+LAG+++ + +N + VI V+
Sbjct: 3 PPVRYCIPAS----------PGSGTYTRHGYIFSSLAGSLTKS---SENGALPVISVTRE 49
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDR 118
+ ++P G +VT ++ ++ K H++ VG+T L +FR +R+E+VRATE D+
Sbjct: 50 TESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDK 106
>gi|512918853|ref|XP_004903881.1| PREDICTED: exosome complex component CSL4 isoform X2
[Heterocephalus glaber]
gi|512952488|ref|XP_004838646.1| PREDICTED: exosome complex component CSL4 isoform X2
[Heterocephalus glaber]
Length = 154
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 82/163 (50%), Gaps = 49/163 (30%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ C+PG+R+C L+ G GTY R GY++S+LAG ++ + +N + V+ V
Sbjct: 3 PPVRYCVPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLTKSS---ENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT CK +E+
Sbjct: 59 TESQLLPDVGAIVT----------CK-------------------------------VEI 77
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 78 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 120
>gi|156093558|ref|XP_001612818.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148801692|gb|EDL43091.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 189
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 104/187 (55%), Gaps = 6/187 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
I +PG+ + D+ V G TY Q + S + G + + D K+V I V++ K+ +
Sbjct: 4 IVLPGEALGSCDA-YVSGENTYSLQKEVRSAILGRRQLTTN-GDGKQV--ISVANTKEFI 59
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+P GD+VT ++ V +L ++I + + A+ +FRA + + ++ E + + ++C+
Sbjct: 60 PLPQVGDLVTCKVYRVTFNLIYCNIILLNSKAVRNSFRAFINKSDIHVYEGELGDNFECF 119
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLFRS-SEKLTNDIEFLKQEKL 183
+ GDII A+ L + + SY+LST ++LGV++ALS+ + + + L ++ + EK
Sbjct: 120 KQGDIIRAKVLSVAQHGSYKLSTVGSDLGVILALSDGGQIMKPVAWNLMVNLSDMTFEKR 179
Query: 184 KLYEELS 190
K+ + S
Sbjct: 180 KVSSDFS 186
>gi|348588122|ref|XP_003479816.1| PREDICTED: exosome complex component CSL4 isoform 2 [Cavia
porcellus]
Length = 154
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 49/163 (30%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ CIPG+R+C L+ G GTY R GY++S+LAG ++ +N + V+ V
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLTKRS---ENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT CK +E+
Sbjct: 59 TESQLLPDVGAIVT----------CK-------------------------------VEI 77
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 78 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 120
>gi|83317659|ref|XP_731258.1| 3'-5' exoribonuclease Csl4 [Plasmodium yoelii yoelii 17XNL]
gi|23491235|gb|EAA22823.1| 3'-5' exoribonuclease csl4 homolog (ec 3.1.13.-) (cgi-108). [human,
putative [Plasmodium yoelii yoelii]
Length = 195
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 100/189 (52%), Gaps = 10/189 (5%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAG--TVSINKHVEDNKEVSVIEVSSYKK 63
I +PG+ + L+ + + G TY+ + ST+ G +SIN +NKE+ I + K
Sbjct: 5 IVLPGEVVGNLN-NYISGNNTYILNNEIRSTILGKKNISIN---NENKEI--INIDVIKD 58
Query: 64 EVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYK 123
+P GD+V ++ V ++ +++ N L + + + + ++ E D + +
Sbjct: 59 YTPLPQVGDLVICKVYRVTFNMIYCNILLTNNKPLKNSLKGYINKSDIHIYEGDLGDNFD 118
Query: 124 CYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLFR-SSEKLTNDIEFLKQE 181
C++ GDII A+ L + + SY+LST ++LGV+IALSE + + ++ L ++ + E
Sbjct: 119 CFKQGDIIKAKVLSIGQHSSYKLSTVGSDLGVIIALSEKGDILQPAAWNLMVNLSDMSFE 178
Query: 182 KLKLYEELS 190
+ K+ E S
Sbjct: 179 QRKVSNEFS 187
>gi|521772451|gb|EPQ64085.1| Subunit of the exosome [Blumeria graminis f. sp. tritici 96224]
Length = 215
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 30/213 (14%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
I +PGQ + S GG GT++ LY+++ G +S + + +++S V
Sbjct: 4 IAVPGQFLGN-TSAFQGGPGTHICGSKLYASILGPISRTSPLSSGPTKRLTKITSSSSAV 62
Query: 66 ---------------------------IVPTPGDVVTARIMAVQQHLCKAHVISVGNTAL 98
++P G+ V R+ + ++ VG T +
Sbjct: 63 LPILSIDRCISSGNTSNVNKTAKTNDKVLPNVGNTVLCRVTRITPKQATVGILVVGETVM 122
Query: 99 SRTFRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIA 157
++ L+R ++VRATE D++ + + +RPGDI+ A + L + +Y LSTA N LGV++A
Sbjct: 123 HGEWQGLIRVQDVRATEKDKVRIVESFRPGDIVRAVVISLGDQSNYYLSTASNNLGVIMA 182
Query: 158 LSEAA-SLFRSSEKLTNDIEFLKQEKLKLYEEL 189
SEA +++ S K D E E K+ + L
Sbjct: 183 KSEAGNAMYPVSWKEYRDPETNLSESRKVAKPL 215
>gi|452821225|gb|EME28258.1| exosome complex component CSL4 [Galdieria sulphuraria]
Length = 174
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 23 GRGTYVRQGYLYSTLAGTVSINKHVEDNK-EVSVIEVSSYKKEVIVPTPGDVVTARIMAV 81
G G Y +Y++L G VS + E N + + + ++ VPT GD V +++ V
Sbjct: 28 GTGCYCLHQRVYASLWGRVSFQETGEANSLRIDIQPRTRSQRSTCVPTVGDEVIGKVLKV 87
Query: 82 QQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKEL 140
+ ++ L TFR ++R +V T D+I+++ C+RPGDII A+ + L +
Sbjct: 88 TWRAVVVEIFAIQEKLLCYTFRGVVRLPDVATTSSDKIDLHNCFRPGDIIRAQVVSLGDP 147
Query: 141 HSYQLSTAENELGVVIALSEA 161
+Y LST+ + GV+ A+S A
Sbjct: 148 QAYYLSTSRSCDGVIYAMSSA 168
>gi|507622088|ref|XP_004625566.1| PREDICTED: exosome complex component CSL4 isoform X2 [Octodon
degus]
Length = 154
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 49/163 (30%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
PP+ C+PG+R+C L+ G GTY R GY++S+LAG ++ +N + V+ V
Sbjct: 3 PPVRYCVPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLTKRS---ENGALPVVSVMRE 58
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
+ ++P G +VT CK +E+
Sbjct: 59 TESQLLPDVGAIVT----------CK-------------------------------VEI 77
Query: 122 YKCYRPGDIILAR-LPLKELHS-YQLSTAENELGVVIALSEAA 162
YK +RPGDI+LA+ + L + S Y L+TAENELGVV+A SE+
Sbjct: 78 YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 120
>gi|9758066|dbj|BAB08645.1| unnamed protein product [Arabidopsis thaliana]
Length = 145
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 71/124 (57%), Gaps = 8/124 (6%)
Query: 18 SDIVG-------GRGTYVRQGYLYSTLAGTVSINKHV-EDNKEVSVIEVSSYKKEVIVPT 69
D++G G+G YV +Y++L GT I + E + +++EV+ +K +P
Sbjct: 9 GDVIGKATEFKAGKGAYVNDATIYASLTGTCRIVSPLPESIDQRAIVEVTGHKAHGPIPE 68
Query: 70 PGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGD 129
G VV AR+ V + ++ VG+ A+ F ++R+++VRATEID+++M++ + GD
Sbjct: 69 TGSVVIARVTKVMTKMAAVDILCVGSKAVRENFAGVIRQQDVRATEIDKVDMHQSFHAGD 128
Query: 130 IILA 133
I+ A
Sbjct: 129 IVRA 132
>gi|457868075|ref|XP_004220960.1| 3'-5' exoribonuclease Csl4 homolog [Plasmodium cynomolgi strain B]
gi|389582274|dbj|GAB64829.1| 3'-5' exoribonuclease Csl4 homolog [Plasmodium cynomolgi strain B]
Length = 189
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 100/188 (53%), Gaps = 8/188 (4%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVE-DNKEVSVIEVSSYKKE 64
I +PG+ + D V G TY Q + S + G + +E D +I V++ K
Sbjct: 4 IVLPGEALGSCDV-YVSGENTYSLQKEVRSAILG----RRQIETDPNGKQIISVANTKDF 58
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
V +P GD+VT ++ V +L ++ + N A+ +FRA + + ++ E + + ++C
Sbjct: 59 VTLPQVGDLVTCKVYRVTFNLIYCSIVLLNNKAIKNSFRAFINKSDIHVYEGELGDNFEC 118
Query: 125 YRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLFRS-SEKLTNDIEFLKQEK 182
++ GDII A+ L + + SY+LST ++LGV++ALS+ + + + L ++ + EK
Sbjct: 119 FKQGDIIRAKVLSVGQHGSYKLSTVGSDLGVILALSDKGQIMKPVAWNLMVNLSDMSFEK 178
Query: 183 LKLYEELS 190
K+ + S
Sbjct: 179 RKVSRDFS 186
>gi|425767161|gb|EKV05739.1| Exosome complex subunit Csl4, putative [Penicillium digitatum Pd1]
gi|425780697|gb|EKV18699.1| Exosome complex subunit Csl4, putative [Penicillium digitatum
PHI26]
Length = 246
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 57/218 (26%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINK---HVEDNKEVSVIEVSS 60
PPI IPGQR+ L S G GT+V+Q ++Y+++AG V + + + V+ V+S
Sbjct: 5 PPIAIPGQRLGPL-STYCAGPGTHVQQSFIYASIAGPVVADPAQPKSQTRPTIRVLRVTS 63
Query: 61 YKKEV-------------------IVPTPGDVVTARIMAVQQHLCKAHVISVGNTA---- 97
K + +P +V AR+ VQ+ ++ V + +
Sbjct: 64 PKAQAGSNPAVPAASSTTPKPRYNTLPAVDSIVLARVTRVQKRQATVSILVVIDESKSQL 123
Query: 98 --LSRT---------------------------FRALLRRENVRATEIDRIEMYKCYRPG 128
SRT F+AL+R+E+VRA E DR+ M + +R G
Sbjct: 124 QDPSRTDSDNDNVASILTSAANPENHSSTDELRFQALIRKEDVRAVEKDRVVMDEMFRVG 183
Query: 129 DIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
DI+ + L + Y ++TA N+LGVV+A S+A ++
Sbjct: 184 DIVRGSVISLGDQSFYYITTARNDLGVVMARSDAGNMM 221
>gi|449302445|gb|EMC98454.1| hypothetical protein BAUCODRAFT_426426 [Baudoinia compniacensis
UAMH 10762]
Length = 197
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 95/172 (55%), Gaps = 14/172 (8%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
MS+ I +PG + + S+ VG GT++ +L++++AG+V +K + ++
Sbjct: 1 MSSSSIALPGHNLGPIASNNVG-PGTHIHCSHLFASIAGSVITTPPPPKSKAAPTVSIA- 58
Query: 61 YKKEVIVPTPGDVVTARI---------MAVQQHLCKAHVISVGNTALSRTFRALLRRENV 111
+ ++P G +V RI +++ A + L+ F A++R++++
Sbjct: 59 --QPPLLPEVGTLVLGRITRTNPRQANLSILALYPSASAATTDPVPLAEPFSAIIRQQDI 116
Query: 112 RATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSEAA 162
R TEID++++ + +R GDI+ A + L + SY STA+NELGVV+A SEA+
Sbjct: 117 RLTEIDKVKVAESFRVGDIVRAVVISLGDERSYYASTAKNELGVVMAWSEAS 168
>gi|70944928|ref|XP_742342.1| 3'-5' exoribonuclease Csl4 [Plasmodium chabaudi chabaudi]
gi|56521265|emb|CAH75916.1| 3'-5' exoribonuclease Csl4 homolog, putative [Plasmodium chabaudi
chabaudi]
Length = 198
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 100/189 (52%), Gaps = 10/189 (5%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAG--TVSINKHVEDNKEVSVIEVSSYKK 63
I +PG+ + L+ + + G TY+ + + ST+ G +SIN N+ +I + K
Sbjct: 8 IVLPGEVVGSLN-NYINGSNTYILKNEIRSTILGKKNISIN-----NESKQIINIDVIKD 61
Query: 64 EVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYK 123
V +P GD+V ++ V ++ +++ N L + + + + ++ E D + +
Sbjct: 62 YVPLPQVGDLVICKVYRVTFNMIYCNIMLRNNKPLKNSLKGYINKSDIHIYEGDLGDNFD 121
Query: 124 CYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLFR-SSEKLTNDIEFLKQE 181
C++ GDII A+ L + + SY+LST ++LGV+IALSE + + ++ L ++ + E
Sbjct: 122 CFKQGDIIKAKVLSIGQHSSYKLSTVGSDLGVIIALSEKGDILQPAAWNLMVNLSDMSFE 181
Query: 182 KLKLYEELS 190
+ K+ E S
Sbjct: 182 QRKVSNEFS 190
>gi|407922424|gb|EKG15523.1| hypothetical protein MPH_07263 [Macrophomina phaseolina MS6]
Length = 209
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 21/181 (11%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVE--------DNKE 52
MS P + +PGQ + S G G ++ L ++L G VS K ++
Sbjct: 1 MSLPALALPGQPLGA-SSKYAPGPGVHIHDAQLCASLLGPVSETKPLKRAAAGASTTTSS 59
Query: 53 VSVIEVS-----------SYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRT 101
+S + ++ S I+P +V AR+ + ++ VG T
Sbjct: 60 ISALSIARPSAQTGSAYASIGASNILPEVDSIVLARVTRLTPRQATVEILVVGETVCREG 119
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSE 160
F+ ++RRE+VRATE DR+++ +R GDI+ + L + +Y LSTA NELGVV+A SE
Sbjct: 120 FQGIIRREDVRATEKDRVKIGDMFRVGDIVRGVVISLGDQSNYYLSTATNELGVVMAKSE 179
Query: 161 A 161
A
Sbjct: 180 A 180
>gi|224011295|ref|XP_002295422.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583453|gb|ACI64139.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 235
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 31/185 (16%)
Query: 9 PGQRICQ--LDSD---IVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEV----- 58
PG+R+ L D ++ G+GTYVRQG L ++L GT+ + + ++E +I +
Sbjct: 16 PGERLGNTLLSRDKTTLIAGKGTYVRQGQLVASLLGTLCAHHQADGDEERWIISIEPEQK 75
Query: 59 -----SSYKKEV--IVPTPGDVVTARIM-AVQQHLCKAHVISV---------GNTA---- 97
SSY K I P GDVV R+ V+ +I++ NT
Sbjct: 76 KQRSQSSYVKNSSNICPQVGDVVLGRVTRVVRPSHAMVDIIAIVPEQTTTSNNNTPFIQP 135
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILARLPLKELHSYQLSTAENELGVVIA 157
L + LR+ +R IE+ +C RP D+ILAR+ Y L+TAE ELGV+ A
Sbjct: 136 LHEPYSGTLRQNEIRPNSSLEIEISECIRPSDVILARVHASGEKDYILTTAEAELGVIQA 195
Query: 158 LSEAA 162
+ E++
Sbjct: 196 VCESS 200
>gi|494834169|gb|EON69871.1| exosome complex subunit Csl4 [Coniosporium apollinis CBS 100218]
Length = 209
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 90/180 (50%), Gaps = 21/180 (11%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTV-------SINKHVEDNKEV 53
MS P + IPGQ + S G GT+V+ ++++++G V S + +
Sbjct: 1 MSLPSLAIPGQPLGSA-SKYSPGAGTHVQSSQIHASISGLVVETAAPKSSKGSANTSSAI 59
Query: 54 SVIEVSSYKKE------------VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRT 101
S + S + ++P VV AR+ + ++ V NT L +
Sbjct: 60 SSLPTLSIPRAQSSGNSTSNGGISVLPEVDSVVLARVTRLTPRQATVAILVVDNTVLPQP 119
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSE 160
F+ L+R ++VRATE DR+++ + +R GDI+ + L + SY LSTA NELGVV+A SE
Sbjct: 120 FQGLIRVQDVRATEKDRVKIAESFRVGDIVRGVVISLGDQSSYYLSTASNELGVVMAESE 179
>gi|145534223|ref|XP_001452856.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420555|emb|CAK85459.1| unnamed protein product [Paramecium tetraurelia]
Length = 186
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 87/153 (56%), Gaps = 10/153 (6%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+ PG+ I + +++ G GTYV+ +++++ G++++N+ + +S+ E+
Sbjct: 4 VYFPGELI-KHKNELQSGIGTYVKDDKIFASMKGSLTMNEQL-----ISIFPSHQQDPEL 57
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+ G ++ ++ ++++ ++ + ++ +LR++N+R+ EID +EM KCY
Sbjct: 58 KI---GAIIIGQVNSIREDRVFVRILKINGVKVNNYIEGVLRKQNIRSHEIDLLEMNKCY 114
Query: 126 RPGDIILARL-PLKELHSYQLSTAENELGVVIA 157
PGDII AR+ + LSTAE+ELGV+ A
Sbjct: 115 LPGDIIKARMISYGDSLKLYLSTAEDELGVLFA 147
>gi|68069599|ref|XP_676711.1| 3'-5' exoribonuclease [Plasmodium berghei strain ANKA]
gi|56496530|emb|CAH95860.1| 3'-5' exoribonuclease Csl4 homolog, putative [Plasmodium berghei]
Length = 194
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 98/189 (51%), Gaps = 10/189 (5%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAG--TVSINKHVEDNKEVSVIEVSSYKK 63
I +PG+ + ++ + + G TY+ + ST+ G +SIN N+ +I + K
Sbjct: 4 IVLPGEVVGNIN-NYISGNNTYILNNEIRSTILGKKNISIN-----NENKQIINIDVIKD 57
Query: 64 EVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYK 123
+P GD+V ++ V ++ +++ N L + + + + ++ E D + +
Sbjct: 58 YTPLPQVGDLVICKVYRVTFNMIYCNIMLTNNKPLKNSLKGYINKSDIHIYEGDLGDNFD 117
Query: 124 CYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLFR-SSEKLTNDIEFLKQE 181
C++ GDII A+ L + + SY+LST ++LGV+IALSE + + ++ L ++ + E
Sbjct: 118 CFKQGDIIKAKVLSIGQHSSYKLSTVGSDLGVIIALSEKGDILQPAAWNLMVNLSDMSFE 177
Query: 182 KLKLYEELS 190
+ K+ E S
Sbjct: 178 QRKVSNEFS 186
>gi|213404568|ref|XP_002173056.1| exosome subunit Csl4 [Schizosaccharomyces japonicus yFS275]
gi|212001103|gb|EEB06763.1| exosome subunit Csl4 [Schizosaccharomyces japonicus yFS275]
Length = 181
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHV--EDNKEVSVIEVSSYKK 63
+ +PGQ + + + GG GT VR YL ST G KH+ N++V +
Sbjct: 5 VVVPGQVLAR---GVKGGEGTAVRGDYLLSTRLGVYDPEKHIVSHTNEQV---------E 52
Query: 64 EVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYK 123
+ ++P G +V ++ + + V N F+ ++ +++RATE D++++ +
Sbjct: 53 QPVLPKVGSIVLGQVTRISVRQASIKMTVVDNVCAKEEFQGVIHVQDIRATEKDKVKVRQ 112
Query: 124 CYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
+RPGDI+ A + L + SY LSTA N+LGV+ A S
Sbjct: 113 SFRPGDIVRALVISLGDGSSYFLSTARNDLGVIFAQS 149
>gi|221052794|ref|XP_002261120.1| 3'-5' exoribonuclease Csl4 homolog [Plasmodium knowlesi strain H]
gi|194247124|emb|CAQ38308.1| 3'-5' exoribonuclease Csl4 homolog, putative [Plasmodium knowlesi
strain H]
Length = 189
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 101/188 (53%), Gaps = 8/188 (4%)
Query: 6 ICIPGQRICQLDSDI-VGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKE 64
I +PG+ + SD+ V G TY Q + S + G + V D+ +I V++
Sbjct: 4 IVLPGEALGS--SDVYVSGENTYTLQKEVRSAILGRREL---VTDSDGKQIISVANTNDF 58
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
+ +P GD+VT ++ V ++ ++I + N + +FRA + + ++ + + + ++C
Sbjct: 59 IPLPQVGDLVTCKVYRVTFNVIYCNIILLNNRPIKNSFRAFINKSDIHVYDGELGDNFEC 118
Query: 125 YRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLFRS-SEKLTNDIEFLKQEK 182
++ GDII A+ L + + SY+LST ++LGV++ALSE + + + L ++ + EK
Sbjct: 119 FKQGDIIRAKVLSVGQHGSYKLSTVGSDLGVILALSEKGQIMKPVAWNLMVNLSDMSFEK 178
Query: 183 LKLYEELS 190
K+ E S
Sbjct: 179 RKVSREFS 186
>gi|388579965|gb|EIM20284.1| hypothetical protein WALSEDRAFT_58311 [Wallemia sebi CBS 633.66]
Length = 187
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
I +PGQ + I Y R L S+ G +S E S+ S++K
Sbjct: 2 IVLPGQPVSDNSDKIKHRESVYERSDKLISSTIGKLS-------KSEDSIRVESAHKNAQ 54
Query: 66 IVPTPGDVVTARIMAV--QQHLCKAHVIS---VGNTALSRTFRALLRRENVRATEIDRIE 120
+P V A ++ + +Q + VI N + +F+A+LR ++VR T+ DR++
Sbjct: 55 PLPEIDSEVLATVVRLNSKQATLQLDVIDGVPCTNNSQDSSFQAILRSQDVRQTDKDRVK 114
Query: 121 MYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
MY C RPGDI+ A + L + +Y LSTA+NELGVV A SE
Sbjct: 115 MYNCVRPGDIVRASVISLGDAKNYYLSTAKNELGVVFATSE 155
>gi|296816276|ref|XP_002848475.1| exosome subunit Csl4 [Arthroderma otae CBS 113480]
gi|238841500|gb|EEQ31162.1| exosome subunit Csl4 [Arthroderma otae CBS 113480]
Length = 263
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 97/222 (43%), Gaps = 58/222 (26%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSI-NKHVEDNKEVS--VIE 57
MS P I +PG R+ L S G GTYVR + +++AG V + + +E NK +I
Sbjct: 18 MSIPSIAVPGLRLGDL-STYTSGPGTYVRDSSICASIAGPVILRDDDIETNKRNPRKIIT 76
Query: 58 VSSYKKEVI--------------------VPTPGDVVTARIMAVQQH------------- 84
VS K +P +V AR+ VQ+
Sbjct: 77 VSRSPKADTNGTQRPLSTPHTKAPLKFNTLPAVDSIVLARVTRVQKRQATVSILMVVDDQ 136
Query: 85 ------------LCKAHVI--------SVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
L A +I S NTA F+A++R+E+VRA E DR+ M
Sbjct: 137 NNDLIDQDMRTILSSAPIITTAGTDSTSTSNTADDLRFQAIIRKEDVRAVEKDRVVMEDM 196
Query: 125 YRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
+R GDI+ A + + + SY STA NELGVV+A SE ++
Sbjct: 197 FRVGDIVRAYVISVGDQSSYYCSTARNELGVVMARSEGGNMM 238
>gi|422294187|gb|EKU21487.1| exosome complex component CSL4 [Nannochloropsis gaditana CCMP526]
Length = 196
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 71 GDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDI 130
G VVT R++ + ++++G+ L +T + ++++E+V +IDRIE+ +C+RPGDI
Sbjct: 62 GHVVTTRVLRITSKQAYVEILALGSVVLRQTCQGIIKKEDVSDHDIDRIEIPRCFRPGDI 121
Query: 131 ILAR-LPLKELHSYQLSTAENELGVVIALSE 160
+ AR + L + Y L TAE+ELGVV A S+
Sbjct: 122 VRARVVSLGDSRQYYLKTAESELGVVYARSQ 152
>gi|164661011|ref|XP_001731628.1| hypothetical protein MGL_0896 [Malassezia globosa CBS 7966]
gi|159105529|gb|EDP44414.1| hypothetical protein MGL_0896 [Malassezia globosa CBS 7966]
Length = 222
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 5 PICIPGQRICQLD-SDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNK--EVSVIEVSSY 61
P+ +PGQ L + V G G Y R+GY+ S G H + K ++++V
Sbjct: 6 PLLLPGQPFPPLPKGEFVLGDGAYGREGYVVSDRIG------HGTETKLGTQTIVKVVGT 59
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISV-----GNTALSRT--------------- 101
+ + +P G V R+ V ++ V G +R
Sbjct: 60 QPPLALPKAGSTVLGRVTRVNPRQATVSILVVDGLPCGGAQATRVGASNNKAAGEGIDGS 119
Query: 102 -FRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
F+ ++R ++VR+TE D + + +C+RPGDI+ A + L + SY LSTA+NELGVV A +
Sbjct: 120 DFQGIIRAQDVRSTEKDAVVLAECFRPGDIVRATVISLGDARSYYLSTAQNELGVVHATT 179
Query: 160 EAASLF 165
S +
Sbjct: 180 RGPSQY 185
>gi|358055298|dbj|GAA98685.1| hypothetical protein E5Q_05373 [Mixia osmundae IAM 14324]
Length = 189
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 9/156 (5%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+PGQ++ + + G GTY R G + S LAG V +H D+K VSV +
Sbjct: 7 FALPGQQLTGAPTKLQSGDGTYTRGGQVISALAGPV---RH--DSKTVSV---GREAQAT 58
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
++P G +V + + + + VG+ R + ++R ++VR D ++++ +
Sbjct: 59 LLPEVGQIVIGTVTRIARAQATLAIQVVGSRLTVRDIQGVIRPQDVRLLAKDTLKIWHSF 118
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
RPGD++ A+ + + SY LSTA N+LGV+ A +E
Sbjct: 119 RPGDLVRAQVVSPGDARSYYLSTARNDLGVISASAE 154
>gi|124511936|ref|XP_001349101.1| 3'-5' exoribonuclease Csl4 homolog, putative [Plasmodium falciparum
3D7]
gi|23498869|emb|CAD50947.1| 3'-5' exoribonuclease Csl4 homolog, putative [Plasmodium falciparum
3D7]
Length = 195
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 87/163 (53%), Gaps = 6/163 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKK-E 64
I IPG+ + L ++ + G TY+ + + S++ G INK +N + ++I V + K
Sbjct: 9 IVIPGEFL-GLQAEYINGNNTYLLKDEIRSSILGQKIINK---NNDKKTIISVYNLKPPS 64
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
+ +P GD+V ++ V H+ +++S N + + + ++ E + + + C
Sbjct: 65 LYLPKIGDIVICKVQRVSFHMIYCYILSSHNIFTKNALKGFILKSDIHINEGELGDNFIC 124
Query: 125 YRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLFR 166
++ GDII A+ L + + SY+LST +ELGV+ A ++ + R
Sbjct: 125 FKQGDIIKAKVLSIGQYSSYKLSTVGSELGVIAAFNQKGEILR 167
>gi|345560325|gb|EGX43450.1| hypothetical protein AOL_s00215g186 [Arthrobotrys oligospora ATCC
24927]
Length = 209
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 23/177 (12%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNK-----------EVS 54
+ +PGQ + + S + G+G +V G + ++L G V N +
Sbjct: 4 LVVPGQPLGPV-SAYIPGQGVHVFNGQIIASLVGQVVTNPQTTTTTTSTSTSTSTSTPTA 62
Query: 55 VIEVSSYKKEVI----------VPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRA 104
V S +K V+ +P V RI + A + V N F+
Sbjct: 63 VPPTISVQKPVLTTDEETNATLLPEVSSTVLCRITRINPRQATASIFIVNNHICGDEFQG 122
Query: 105 LLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
++R ++VR TE+D+++++ +RPGDI+ A+ + L + +Y LSTA NELGV++A SE
Sbjct: 123 VIRVQDVRLTEVDKVKIFNSFRPGDIVRAKVISLGDQSNYYLSTASNELGVIMADSE 179
>gi|268574534|ref|XP_002642245.1| C. briggsae CBR-EXOS-1 protein [Caenorhabditis briggsae]
Length = 207
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 86/158 (54%), Gaps = 11/158 (6%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKE-VSVIEVSSYKKEV-- 65
PG ++ D G G Y ++S++AG V++ + + + VIEV + ++
Sbjct: 9 PGDKVLDRIGDYKMGNGLYETNRRIFSSIAGFVNVYGFRDKSDNLIQVIEVRRSEDQMDN 68
Query: 66 -IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
++P G VVTA++MAV K +IS+G+ + F ALL ++ +R E + + +K
Sbjct: 69 ELLPFSGAVVTAKVMAVGLRFAKCDIISIGDKVYKKRFSALLPKKKLRPLEPELSDPFKN 128
Query: 125 Y-RPGDIILARL----PLKELHSYQLSTAENELGVVIA 157
+ RP D ILA++ +K+ + LS AE+ELGVV+
Sbjct: 129 FVRPNDYILAKVCEDAGIKD--KFVLSIAEDELGVVLC 164
>gi|259480509|tpe|CBF71706.1| TPA: CorA family metal ion transporter, putative (AFU_orthologue;
AFUA_5G13530) [Aspergillus nidulans FGSC A4]
Length = 246
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 56/217 (25%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKK 63
P + IPGQR+ + G GT+V ++Y+++AG VS++ ++ S+I VS K
Sbjct: 6 PSLAIPGQRLGPAGT-YSAGPGTHVYHSHIYASIAGPVSVDSAQVNSPAKSIISVSRTMK 64
Query: 64 EVI------------VPTP--------GDVVTARIMAVQQHLCKAHVI-----SVGNTAL 98
+ I VP P VV AR+ VQ+ ++ S + AL
Sbjct: 65 KAIAAASTSTSSTTTVPKPKYNTLPAVDSVVLARVTRVQKRQATVSILVVLDESASSQAL 124
Query: 99 SRT-----------------------------FRALLRRENVRATEIDRIEMYKCYRPGD 129
+ + F+AL+R+E+VRA E DR+ + + +R GD
Sbjct: 125 NPSQSASDNDNIESILASAANPENHSSSDELRFQALIRKEDVRAVEKDRVVLDEMFRVGD 184
Query: 130 IILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
I+ + L + Y ++TA N+LGVV+A SEA ++
Sbjct: 185 IVRGTVISLGDQSYYYITTARNDLGVVMARSEAGNMM 221
>gi|505755591|gb|EOQ99790.1| Exosome complex component csl4 [Wallemia ichthyophaga EXF-994]
Length = 188
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
I +PGQ + I G Y R L S+ G + + +D+ V S++K
Sbjct: 3 IVLPGQPVSDKVDSINQAEGVYTRSDKLISSTVGRL---QKTDDSVRVE----STHKNSQ 55
Query: 66 IVPTPGDVVTARIMAV--QQHLCKAHVIS---VGNTALSRTFRALLRRENVRATEIDRIE 120
+P V A ++ + +Q VI N + F+ +LR ++VR T+ DR++
Sbjct: 56 PLPEIDSEVLATVIRLNSKQATLTLDVIDGVPCTNNSQDSNFQGILRSQDVRQTDKDRVK 115
Query: 121 MYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSE 160
MY C RPGDI+ A + L + +Y LSTA+NE GVV A SE
Sbjct: 116 MYNCVRPGDIVRAVVISLGDARNYYLSTAKNEYGVVFATSE 156
>gi|405120343|gb|AFR95114.1| exosome 3'->5 exonuclease subunit ski4 [Cryptococcus neoformans
var. grubii H99]
Length = 191
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 1 MSNPPICIPGQRI-CQLDSDIVG--GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIE 57
MS+P + +PGQ + QL + + G+G Y R G + +++ G + D VSV+
Sbjct: 1 MSSPSLLLPGQPLPAQLITPPLPKCGKGCYERNGQIVASVVG-----RPRRDGAVVSVVG 55
Query: 58 VSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEID 117
V V + V +R+ Q H+ + S F L+R ++R TE D
Sbjct: 56 REETVGTVDVDSIVIGVISRLTPQQAHVTLTTLADRPLPESSEDFTGLIRIADIRLTERD 115
Query: 118 RIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
+++M +C+R GDI+ A+ L L + SY LSTA NELGVV A SEA
Sbjct: 116 KVKMGECFRLGDIVKAKVLSLGDARSYYLSTAANELGVVYAKSEAG 161
>gi|388855285|emb|CCF51179.1| related to CSL4-exosome core component [Ustilago hordei]
Length = 259
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 81/170 (47%), Gaps = 29/170 (17%)
Query: 23 GRGTYVRQGYLYSTLAG----TVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARI 78
G GTY R Y+ S+L G T S + I +S + +VP P V AR+
Sbjct: 31 GPGTYTRGDYILSSLVGYEARTPSSSSSTSKKPTSEYISISGVENRFVVPQPDSTVIARV 90
Query: 79 MAV---QQHL---------CKAHVI--------SVGNTALSRT----FRALLRRENVRAT 114
V Q +L C + +GN A F+ ++R ++VR T
Sbjct: 91 TRVTPRQAYLSILIVDGLPCGSSSSTSSTFVQSGLGNHAAGEGEGVDFQGVVRSQDVRTT 150
Query: 115 EIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
E D++++ C+RPGDI+ A + L + SY LSTAEN LGV+ A+S ++
Sbjct: 151 EKDKVKLADCFRPGDIVRATVISLGDARSYYLSTAENSLGVIYAVSATST 200
>gi|485917653|gb|EOD44558.1| putative 3 -5 exoribonuclease csl4 protein [Neofusicoccum parvum
UCRNP2]
Length = 206
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 84/179 (46%), Gaps = 23/179 (12%)
Query: 2 SNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSY 61
S P + +PGQ + S G G +++ LY++L G VS K K S SS
Sbjct: 3 SLPALALPGQPLGGAAS-YAPGPGIHIQDQQLYASLLGPVSATKP---PKRPSAAGPSSS 58
Query: 62 KKEVIVPTPGD------------------VVTARIMAVQQHLCKAHVISVGNTALSRTFR 103
+ + P VV AR+ + ++ VG F+
Sbjct: 59 MPALSIARPDAHAAVGASAATNTLPEVDAVVLARVTRLTPRQATVEILVVGEAVCREGFQ 118
Query: 104 ALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSEA 161
++RRE+VRATE DR+++ +R GDI+ + L + +Y LSTA NELGVV+A SEA
Sbjct: 119 GIIRREDVRATEKDRVKIGDMFRVGDIVRGVVISLGDQSNYYLSTATNELGVVMAKSEA 177
>gi|58266496|ref|XP_570404.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134111194|ref|XP_775739.1| hypothetical protein CNBD4680 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258403|gb|EAL21092.1| hypothetical protein CNBD4680 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226637|gb|AAW43097.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 191
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 1 MSNPPICIPGQRI-CQLDSDIVG--GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIE 57
MS+P + +PGQ + QL + + G+G Y R G + +++ G + D VSVI
Sbjct: 1 MSSPSLLLPGQPLPAQLITPPLPKCGKGCYERNGQILASVVG-----RPRRDGAVVSVIG 55
Query: 58 VSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEID 117
V V + V +R+ Q H+ + S F L+R ++R TE D
Sbjct: 56 REETVGTVDVDSIVIGVISRLTPQQAHMTLTTLSDRPLPESSEDFTGLIRIADIRLTERD 115
Query: 118 RIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
+++M +C+R GDI+ A+ L L + SY LSTA +ELGVV A SEA
Sbjct: 116 KVKMGECFRLGDIVKAKVLSLGDARSYYLSTAADELGVVYAKSEAG 161
>gi|17555992|ref|NP_499416.1| Protein EXOS-1 [Caenorhabditis elegans]
gi|3881058|emb|CAA19529.1| Protein EXOS-1 [Caenorhabditis elegans]
Length = 208
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 87/158 (55%), Gaps = 11/158 (6%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKE-VSVIEVSSYKKEV-- 65
PG ++ + G+G Y +++++AG V++ + + V VIEV + ++
Sbjct: 9 PGDKVLDAIGEYRMGKGLYEANRRIFASVAGFVNVYGFRDKSDNLVQVIEVRRSEDQLDN 68
Query: 66 -IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
++P G +VTA++MAV K +IS+G+ + F ALL ++ +R E + E +K
Sbjct: 69 ELLPFHGAIVTAKVMAVGLRFAKCDIISIGDKVYKKRFSALLPKKKLRPLEPELSEPFKN 128
Query: 125 Y-RPGDIILARL----PLKELHSYQLSTAENELGVVIA 157
+ RP D ILA++ +K+ + LS AE+ELGVV+
Sbjct: 129 FVRPNDYILAKVCEDAEIKD--KFVLSIAEDELGVVLC 164
>gi|315042109|ref|XP_003170431.1| 3'-5' exoribonuclease CSL4 [Arthroderma gypseum CBS 118893]
gi|311345465|gb|EFR04668.1| 3'-5' exoribonuclease CSL4 [Arthroderma gypseum CBS 118893]
Length = 246
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 98/223 (43%), Gaps = 64/223 (28%)
Query: 2 SNPPICIPGQRICQLDSDI-VGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVS------ 54
S P I +PG +C +S + G GTYVR +Y+++AG V + D+KE
Sbjct: 4 SIPSIAVPG--LCLGNSSAYISGPGTYVRDSSIYASIAGPVILK---SDDKETDPKRKPR 58
Query: 55 -VIEVS-----------------SYKKEVIVPTPGDVVTARIMAVQQH------------ 84
++ VS S K +P +V AR+ VQ+
Sbjct: 59 KILTVSRSPQTDTRNPTQKQQTKSPLKFNTLPAVDSIVLARVTRVQKRQATVSILMVVDD 118
Query: 85 -------------LCKAHVI--------SVGNTALSRTFRALLRRENVRATEIDRIEMYK 123
L A +I S NTA F+A++R+E+VRA E DR+ M
Sbjct: 119 QNNDLIDTDMRSILSSAPIITTAGTDSTSTSNTADDLRFQAIIRKEDVRAVEKDRVVMED 178
Query: 124 CYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
+R GDI+ A + + + SY STA NELGVV+A SE ++
Sbjct: 179 MFRVGDIVRAYVISVGDQSSYYCSTARNELGVVMARSEGGNMM 221
>gi|452843739|gb|EME45674.1| hypothetical protein DOTSEDRAFT_128511 [Dothistroma septosporum
NZE10]
Length = 190
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 92/174 (52%), Gaps = 7/174 (4%)
Query: 8 IPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIV 67
+PGQ + S+ +G GT++ L +++ G + + ++ + ++ ++
Sbjct: 6 LPGQVLGPTTSNDLG-EGTHIHNTQLCASIPGQILSQPSTSKSSKLPTVSITRTTGNLL- 63
Query: 68 PTPGDVVTARIMAVQQHLCKAHVISVGNTA---LSRTFRALLRRENVRATEIDRIEMYKC 124
P G VV +I ++++G+ F AL+R++++RATEID++++ +
Sbjct: 64 PEVGTVVLGKITRTGPKQANISILAIGSGGEHVCRDPFPALIRQQDIRATEIDKVKVTES 123
Query: 125 YRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSEAAS-LFRSSEKLTNDIE 176
+R GD++ A + L + SY L TA+NELGVV+A SE + +F S K D E
Sbjct: 124 FRVGDVVRAVVISLGDERSYYLGTAKNELGVVLATSEWGNQMFPISWKEFQDPE 177
>gi|302662628|ref|XP_003022966.1| hypothetical protein TRV_02903 [Trichophyton verrucosum HKI 0517]
gi|291186940|gb|EFE42348.1| hypothetical protein TRV_02903 [Trichophyton verrucosum HKI 0517]
Length = 247
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 57/220 (25%)
Query: 2 SNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSI---NKHVEDNKEVSVIEV 58
S P I +PG R+ S G GTYVR + +++AG V + +K + ++ I
Sbjct: 4 SIPSIAVPGLRLGD-SSTFTSGPGTYVRDSSICASIAGPVILKTDDKGTDPKRKPRKILT 62
Query: 59 SSYKKEVIVPTP-------------------GDVVTARIMAVQQH--------------- 84
S + P P +V AR+ VQ+
Sbjct: 63 VSRSPQTDTPNPTQKQQQAKSPLKFNTLPAVDSIVLARVTRVQKRQATVSILMVVDDQNN 122
Query: 85 ----------LCKAHVI--------SVGNTALSRTFRALLRRENVRATEIDRIEMYKCYR 126
L A +I S NTA F+A++R+E+VRA E DR+ M +R
Sbjct: 123 DLIDTNMRTILSSAPIITTAGTDSTSTSNTADDLWFQAIIRKEDVRAVEKDRVVMEDMFR 182
Query: 127 PGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
GDI+ A + + + SY STA NELGVV+A SE ++
Sbjct: 183 VGDIVRAYVISVGDQSSYYCSTARNELGVVMARSEGGNMM 222
>gi|317034769|ref|XP_001401124.2| exosome complex subunit Csl4 [Aspergillus niger CBS 513.88]
gi|350639558|gb|EHA27912.1| hypothetical protein ASPNIDRAFT_184867 [Aspergillus niger ATCC
1015]
Length = 251
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 61/222 (27%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVS-SYK 62
P + IPGQR+ + S G GT+V+ +Y+++AG V +++ +K ++ VS +
Sbjct: 6 PTLAIPGQRLGSIAS-YAAGPGTHVQNATIYASIAGPVVVDQAQPSSKAKLILSVSRTGP 64
Query: 63 KEVIVPTPG------------------------DVVTARIMAVQQHLCKAHVISVGNTAL 98
K+ P P VV AR+ VQ+ ++ V + +
Sbjct: 65 KKAAAPAPSTKASANPANTGKPKLRYNTLPAVDSVVLARVTRVQKRQATVSILVVLDESA 124
Query: 99 SRT----------------------------------FRALLRRENVRATEIDRIEMYKC 124
S F+AL+R+E+VRA E DR+ M +
Sbjct: 125 SSQPLNPSQTASDNDNIEAILSSAANPENHSNSDELRFQALIRKEDVRAVEKDRVVMDEM 184
Query: 125 YRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
+R GDI+ + L + Y L+TA N+LGVV+A SE+ ++
Sbjct: 185 FRVGDIVRGTVISLGDQSFYYLTTARNDLGVVMARSESGNMM 226
>gi|358374130|dbj|GAA90724.1| 3'-5' exoribonuclease [Aspergillus kawachii IFO 4308]
Length = 251
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 61/222 (27%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVS-SYK 62
P + IPGQR+ + S G GT+V+ +Y+++AG V +++ +K ++ VS +
Sbjct: 6 PTLAIPGQRLGSIAS-YAAGPGTHVQNATIYASIAGPVVVDQAQPSSKAKLILSVSRTGP 64
Query: 63 KEVIVPTPG------------------------DVVTARIMAVQQHLCKAHVISVGNTAL 98
K+ P P VV AR+ VQ+ ++ V + +
Sbjct: 65 KKAAAPPPSTKASAKPATTGKPKLRYNTLPAVDSVVLARVTRVQKRQATVSILVVLDESA 124
Query: 99 SRT----------------------------------FRALLRRENVRATEIDRIEMYKC 124
S F+AL+R+E+VRA E DR+ M +
Sbjct: 125 SSQPLNPAQTASDNDNIEAILSSAANPENHSNSDELRFQALIRKEDVRAVEKDRVVMDEM 184
Query: 125 YRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
+R GDI+ + L + Y L+TA N+LGVV+A SE+ ++
Sbjct: 185 FRVGDIVRGTVISLGDQSFYYLTTARNDLGVVMARSESGNMM 226
>gi|308497492|ref|XP_003110933.1| CRE-EXOS-1 protein [Caenorhabditis remanei]
gi|308242813|gb|EFO86765.1| CRE-EXOS-1 protein [Caenorhabditis remanei]
Length = 213
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 11/158 (6%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKE-VSVIEVSSYKKEV-- 65
PG ++ D G G Y +Y+++ G V++ + V VIEV + ++
Sbjct: 9 PGDKVLDGIGDYKMGNGLYEANRRVYASVTGYVNVYGFRDKTDNLVQVIEVRRSENQLDN 68
Query: 66 -IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
++P G VVTA++MAV K +IS+G+ + F ALL ++ +R E + E +K
Sbjct: 69 ELLPFNGAVVTAKVMAVGLRFAKCDIISIGDKVYKKRFSALLPKKKLRPLEPELSEPFKN 128
Query: 125 Y-RPGDIILARL----PLKELHSYQLSTAENELGVVIA 157
+ RP D ILA++ +K+ + LS AE+ELGVV+
Sbjct: 129 FVRPNDYILAKVCDDAGIKD--KFVLSIAEDELGVVLC 164
>gi|321257517|ref|XP_003193616.1| hypothetical protein CGB_D4080C [Cryptococcus gattii WM276]
gi|317460086|gb|ADV21829.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 191
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 15/169 (8%)
Query: 1 MSNPPICIPGQRI-CQLDSDIVG--GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIE 57
MS P + +PGQ + QL + + G+G Y G + +++ G + D VSVI
Sbjct: 1 MSLPSLLLPGQPLPAQLIAPPLPKCGKGCYEHNGQILASVVG-----RPRRDGAVVSVIG 55
Query: 58 VSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTAL---SRTFRALLRRENVRAT 114
V V + V +R+ Q H+ + ++G+ L S F L+R ++R T
Sbjct: 56 REETVGTVDVDSIVIGVISRLTPQQAHVT---LTTLGDRPLPESSEDFTGLIRIADIRLT 112
Query: 115 EIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
E D+++M +C+R GDI+ A+ L L + SY LSTA NELGVV A SEA
Sbjct: 113 ERDKVKMGECFRLGDIVKAKVLSLGDARSYYLSTAANELGVVYAKSEAG 161
>gi|483508335|gb|EOA98486.1| 3'-5' exoribonuclease CSL4-like protein, partial [Anas
platyrhynchos]
Length = 59
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%), Gaps = 3/59 (5%)
Query: 107 RRENVRATEIDRIEMYKCYRPGDIILAR---LPLKELHSYQLSTAENELGVVIALSEAA 162
RRE++RATE D++E+YK +RPGDI+LA+ L +Y LSTAENELGVV+A SEA
Sbjct: 1 RREDIRATEKDKVEVYKSFRPGDIVLAKVISLGDAAQSNYLLSTAENELGVVVARSEAG 59
>gi|119478244|ref|XP_001259333.1| 3'-5' exoribonuclease (Csl4), putative [Neosartorya fischeri NRRL
181]
gi|119407487|gb|EAW17436.1| 3'-5' exoribonuclease (Csl4), putative [Neosartorya fischeri NRRL
181]
Length = 249
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 59/220 (26%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVS---- 59
P + IPGQR+ + S G GT+V+ +Y+++AG V + + +K S++ VS
Sbjct: 6 PSLAIPGQRLGPVSS-YSAGPGTHVQNANIYASIAGPVVVQQAQPSSKVKSILSVSRNLP 64
Query: 60 ----------------SYKKEV---IVPTPGDVVTARIMAVQQHLCKAHVI-----SVG- 94
+ K ++ +P +V AR+ VQ+ ++ S G
Sbjct: 65 RKTDPSTSTTPAYTTTTTKPKLRYNTLPAVDSIVLARVTRVQKRQATVSILVVLDESAGS 124
Query: 95 -NTALSRT---------------------------FRALLRRENVRATEIDRIEMYKCYR 126
N S+T F+AL+R+E+VRA E DR+ M + +R
Sbjct: 125 QNPDPSKTASDNDNIVSILTSAANPENHSSSDELRFQALIRKEDVRAVEKDRVVMDEMFR 184
Query: 127 PGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
GDI+ + L + Y L+TA N+LGVV+A SEA ++
Sbjct: 185 VGDIVRGSVISLGDQSFYYLTTARNDLGVVMARSEAGNMM 224
>gi|302497299|ref|XP_003010650.1| hypothetical protein ARB_03351 [Arthroderma benhamiae CBS 112371]
gi|291174193|gb|EFE30010.1| hypothetical protein ARB_03351 [Arthroderma benhamiae CBS 112371]
Length = 247
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 94/220 (42%), Gaps = 61/220 (27%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDN------KEVSVIE 57
P I +PG R+ S G GTYVR + +++AG V + +DN K ++
Sbjct: 6 PSIAVPGLRLGD-SSTFTSGPGTYVRDSSICASIAGPVIL--KTDDNGTDPKRKPRKILT 62
Query: 58 VS------------------SYKKEVIVPTPGDVVTARIMAVQQH--------------- 84
VS S K +P +V AR+ VQ+
Sbjct: 63 VSRSPQTDTPNPTQRQQQAKSPLKFNTLPAVDSIVLARVTRVQKRQATVSILMVVDDQNN 122
Query: 85 ----------LCKAHVI--------SVGNTALSRTFRALLRRENVRATEIDRIEMYKCYR 126
L A +I S NTA F+A++R+E+VRA E DR+ M +R
Sbjct: 123 DLIDTNMRTILSSAPIITTAGTDSTSTSNTADDLRFQAIIRKEDVRAVEKDRVVMEDMFR 182
Query: 127 PGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
GDI+ A + + + SY STA NELGVV+A SE ++
Sbjct: 183 VGDIVRAYVISVGDQSSYYCSTARNELGVVMARSEGGNMM 222
>gi|366995217|ref|XP_003677372.1| hypothetical protein NCAS_0G01320 [Naumovozyma castellii CBS 4309]
gi|342303241|emb|CCC71019.1| hypothetical protein NCAS_0G01320 [Naumovozyma castellii CBS 4309]
Length = 268
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVI 156
L TFR L+R ++VRATE DR+++ C++PGDI+ A+ L L + +Y L+TA N+LGVV
Sbjct: 173 LGETFRGLIRSQDVRATERDRVKIMDCFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVF 232
Query: 157 A 157
A
Sbjct: 233 A 233
>gi|169614391|ref|XP_001800612.1| hypothetical protein SNOG_10336 [Phaeosphaeria nodorum SN15]
gi|111061551|gb|EAT82671.1| hypothetical protein SNOG_10336 [Phaeosphaeria nodorum SN15]
Length = 213
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 25/189 (13%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTV------------------- 41
M+ P + +PGQ + D + G GT++ + +Y+++AG V
Sbjct: 1 MALPSLALPGQLLGPTDK-YLPGPGTHIHEQQIYASIAGPVVSSPSRASQTAATASKSKL 59
Query: 42 ----SINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTA 97
SI++ + ++ S I+P V ARI + ++ +G+T
Sbjct: 60 VPLLSISRPPNTTSDPGILGTGSGGGAPILPEVDSTVLARITRLGARFATCEILVIGDTV 119
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVI 156
F+ +RRE++RATE D+I++ + +R GD+I + L + +Y ++T NE GVV+
Sbjct: 120 CREAFQGQIRREDIRATEKDKIKIEESFRVGDLIRGVVISLGDQSNYYVATDRNEFGVVM 179
Query: 157 ALSEAASLF 165
A SE L
Sbjct: 180 ARSEEGRLM 188
>gi|398406060|ref|XP_003854496.1| hypothetical protein MYCGRDRAFT_69638 [Zymoseptoria tritici IPO323]
gi|339474379|gb|EGP89472.1| hypothetical protein MYCGRDRAFT_69638 [Zymoseptoria tritici IPO323]
Length = 187
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 87/159 (54%), Gaps = 6/159 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+ +PGQ + ++ +G GT+++ L ++++G + ++ + ++
Sbjct: 1 MALPGQILGPTSANSLG-TGTHIQGTDLCASISGPILSQPSTSKTSKLPTVSIAR-TTGT 58
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTA---LSRTFRALLRRENVRATEIDRIEMY 122
++P G V+ +I ++++G+ F AL+R++++RATEID++++
Sbjct: 59 LLPEVGTVILGKITRTGPRQANVTILALGSAGEHVCGDAFPALIRQQDIRATEIDKVKVA 118
Query: 123 KCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
+ +R GD++ A + L + SY L+TA NELGVV+A SE
Sbjct: 119 ESFRVGDVVRATVISLGDERSYYLTTARNELGVVMAQSE 157
>gi|328854549|gb|EGG03681.1| hypothetical protein MELLADRAFT_37939 [Melampsora larici-populina
98AG31]
Length = 206
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 6 ICIPGQRICQ-------LDSDIVGGRGTYVRQGYLYSTLAGTVSINKHV-EDNKEVSVIE 57
I +PGQ Q + + G G + R G LY++ AG V + VSV+
Sbjct: 12 IVVPGQAFAQTTDNQKSISATYQPGPGVFSRDGKLYASTAGYAKREGGVIHSPQTVSVVR 71
Query: 58 VSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTAL--SRTFRALLRRENVRATE 115
+ + VP G +VT + + + +I+V + L + F ++R ++VR +
Sbjct: 72 PTRLAR---VPVVGTIVTGLVTKLNKLQASLAIITVEDVPLPVGQDFPGVIRAQDVRQVD 128
Query: 116 IDRIEMYKCYRPGDIILA---RLPLKELHSYQLSTAENELGVVIA 157
D+++++ C+RPGDI+ A P Y L+T NELGVV A
Sbjct: 129 KDKVKIWTCFRPGDIVRAEVISFPTGS-TGYLLATFRNELGVVFA 172
>gi|121714042|ref|XP_001274632.1| 3'-5' exoribonuclease (Csl4), putative [Aspergillus clavatus NRRL
1]
gi|119402785|gb|EAW13206.1| 3'-5' exoribonuclease (Csl4), putative [Aspergillus clavatus NRRL
1]
Length = 253
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 63/224 (28%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVS---- 59
P + IPGQ++ + S G GT+V+ +Y+++AG V I + +K +++ VS
Sbjct: 6 PKLAIPGQQLGSITS-YFAGPGTHVKNANIYASIAGPVIIEQTQPSSKVKAIVSVSRNLN 64
Query: 60 SYKKEVIVPTPG-----------------------DVVTARIMAVQQHLCKAHVISVGNT 96
+ V PTP +V AR+ VQ+ ++ V +
Sbjct: 65 TQPGLVAKPTPAPSTPAKTTAAKPKLRYNTLPAVDSIVLARVTRVQKRQATVSILVVLDA 124
Query: 97 ALSRT----------------------------------FRALLRRENVRATEIDRIEMY 122
+ S F+AL+R+E+VRA E DR+ M
Sbjct: 125 SSSAQIPDSSKTASDNDNIASILTSAANPENHSNSDELRFQALIRKEDVRAVEKDRVVMD 184
Query: 123 KCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
+ +R GDI+ + L + Y L+TA N+LGVV+A SEA ++
Sbjct: 185 EMFRVGDIVRGTVISLGDQSFYYLTTARNDLGVVMARSEAGNMM 228
>gi|393218356|gb|EJD03844.1| hypothetical protein FOMMEDRAFT_106067 [Fomitiporia mediterranea
MF3/22]
Length = 185
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 13/166 (7%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
MS P + +PGQ + + G G Y+R G + + + GT + +
Sbjct: 1 MSPPDLLLPGQPVPVTEPLPHVGDGLYLRDGIIRAGVMGTPQLIGS----------SILI 50
Query: 61 YKKEVIVPTPGDVVTARI--MAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDR 118
K+ P P VV I ++ Q + V+ +L F ++R ++VRATE D+
Sbjct: 51 QKRRPHPPAPNSVVLGTITRLSPLQAIISITVVDGMPLSLGEEFTGVIRSQDVRATEKDK 110
Query: 119 IEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSEAAS 163
+++ C+R GD++ + L + SY ++TA N+LGV+ A SEA +
Sbjct: 111 VKLADCFRGGDVVKGIVISLGDARSYYITTARNDLGVIFATSEAGA 156
>gi|159126973|gb|EDP52089.1| 3'-5' exoribonuclease (Csl4), putative [Aspergillus fumigatus
A1163]
Length = 249
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 59/220 (26%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVS---- 59
P + IPGQR+ + S G GT+V+ +Y+++AG V + + +K S++ VS
Sbjct: 6 PSLAIPGQRLGPVSS-YSAGPGTHVQNANIYASIAGPVVLQQAQPSSKSKSILSVSRNLP 64
Query: 60 ----------------SYKKEV---IVPTPGDVVTARIMAVQQHLCKAHVI-----SVG- 94
+ K ++ +P +V AR+ VQ+ ++ S G
Sbjct: 65 RKTDPSTSTTPVKATTTTKPKLRYNTLPAVDSIVLARVTRVQKRQATVSILVVLDESAGS 124
Query: 95 -NTALSRT---------------------------FRALLRRENVRATEIDRIEMYKCYR 126
+ S+T F+AL+R+E+VRA E DR+ M + +R
Sbjct: 125 QDPDPSKTASDNDNIVSILASAANPENHSNSDELRFQALIRKEDVRAVEKDRVVMDEMFR 184
Query: 127 PGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
GDI+ + L + Y L+TA N+LGVV+A SEA ++
Sbjct: 185 VGDIVRGSVISLGDQSFYYLTTARNDLGVVMARSEAGNMM 224
>gi|449551236|gb|EMD42200.1| hypothetical protein CERSUDRAFT_147841 [Ceriporiopsis subvermispora
B]
Length = 191
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Query: 23 GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARI--MA 80
G G Y R G + ++L GT E S + +S + P P VV I ++
Sbjct: 23 GSGVYARDGAVRASLIGT----PRFEGPVGFSTLAISGTRPLPRPPAPNSVVLGSITRLS 78
Query: 81 VQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKE 139
Q + +V+ F ++R ++VRATE D++++ C+R GD++ + L +
Sbjct: 79 PLQAVLSINVVDGVPLPAGEEFTGVIRVQDVRATEKDKLKIADCFRGGDVVKGLVISLGD 138
Query: 140 LHSYQLSTAENELGVVIALSEAAS 163
SY ++TA N+LGV+ A SEA +
Sbjct: 139 ARSYYVTTARNDLGVIFATSEAGA 162
>gi|443896595|dbj|GAC73939.1| exosomal 3'-5' exoribonuclease complex, subunit ski4 [Pseudozyma
antarctica T-34]
Length = 257
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 47/202 (23%)
Query: 6 ICIPGQRICQLDSDIVG------GRGTYVRQGYLYSTLAG-------------TVSINKH 46
+ +PGQ + S G G GTY R Y+ S+L G + S
Sbjct: 13 LLLPGQPLSSTLSTKPGQPQLKLGLGTYSRGDYVLSSLVGYETRTPSTSASAPSSSSRSQ 72
Query: 47 VEDNKEVSVIEVSSYKKEVIVPTPGDVVTAR------------IMAVQQHLCKAHVI--- 91
V + VS+ S + +VP P V AR I+ V C +
Sbjct: 73 VPKTETVSI---SGVENRFVVPRPDSTVIARVTRVTPRQAYLSILIVDGQPCGSSSSTSS 129
Query: 92 -----SVGNTALSRT----FRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELH 141
+GN A F+ ++R ++VR+TE D++++ C+RPGDI+ A + L +
Sbjct: 130 TFVQSGLGNHAAGEGEGIDFQGVVRSQDVRSTEKDKVKLADCFRPGDIVRATVISLGDAR 189
Query: 142 SYQLSTAENELGVVIALSEAAS 163
SY LSTA N LGV+ ALS ++
Sbjct: 190 SYYLSTAANHLGVIYALSATSA 211
>gi|326472645|gb|EGD96654.1| exosome complex subunit Csl4 [Trichophyton tonsurans CBS 112818]
Length = 247
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 92/220 (41%), Gaps = 57/220 (25%)
Query: 2 SNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDN----KEVSVIE 57
S P I +PG R+ S G GTYVR + +++AG V + K ++
Sbjct: 4 STPSIAVPGLRLGD-SSTFTSGPGTYVRDSSICASIAGPVILKTDDRGTDPKRKPRKILT 62
Query: 58 VS------------------SYKKEVIVPTPGDVVTARIMAVQQH--------------- 84
VS S K +P +V AR+ VQ+
Sbjct: 63 VSRSPQTDTPNHTQKQQQAKSPLKFNTLPAVDSIVLARVTRVQKRQATVSILMVIDDQNN 122
Query: 85 ----------LCKAHVI--------SVGNTALSRTFRALLRRENVRATEIDRIEMYKCYR 126
L A +I S NTA F+A++R+E+VRA E DR+ M +R
Sbjct: 123 DLIDTNMRTILSSAPIITTAGTDSTSTSNTADDLRFQAIIRKEDVRAVEKDRVVMEDMFR 182
Query: 127 PGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
GDI+ A + + + SY STA NELGVV+A SE ++
Sbjct: 183 VGDIVRAYVISVGDQSSYYCSTARNELGVVMARSEGGNMM 222
>gi|331236854|ref|XP_003331085.1| hypothetical protein PGTG_13048 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309310075|gb|EFP86666.1| hypothetical protein PGTG_13048 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 198
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 1 MSNP----PICIPGQRI-----CQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNK 51
+SNP P IPGQ + Q + G GT+ RQG +Y+++ G + +
Sbjct: 3 ISNPKTSSPSVIPGQELITSDESQPSATYQCGPGTFERQGKVYASVVG--------QPVR 54
Query: 52 EVSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTAL--SRTFRALLRRE 109
I V + VP G +V I V + +I V + L + + +R +
Sbjct: 55 NAGTISVECSSRCAKVPVVGTIVIGMITKVTKPQAHVSIIMVDDLPLPVGQELQGAIRSQ 114
Query: 110 NVRATEIDRIEMYKCYRPGDIILA---RLPLKELHSYQLSTAENELGVVIA 157
+VR + D++ ++ CYRPGDI+ A LP + Y L+T N LGVV A
Sbjct: 115 DVRQVDKDKVIIWDCYRPGDIVRAEVISLPTSAM-GYLLATFRNHLGVVFA 164
>gi|453082284|gb|EMF10331.1| hypothetical protein SEPMUDRAFT_69392 [Mycosphaerella populorum
SO2202]
Length = 203
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGT-----VSINKHVEDNKE--- 52
M++ I +PG + D + +G GT++ + +++AG V N + +++
Sbjct: 1 MTSTTILLPGTLLGPADKNSLG-EGTHIHAQNICASIAGPLAGAGVPTNTSSKSSQKASP 59
Query: 53 -VSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVG----NTALSRTFRALLR 107
+S+ S ++P ++ RI ++++G + S F AL+R
Sbjct: 60 TLSIHRTISSSSTALLPEVNSLILGRITRTNPRQASLLILALGPNGEHNVSSDPFPALIR 119
Query: 108 RENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSEAAS-LF 165
++++RATEID++++ + +R GDI+ A + L + SY LSTA NELGVV+A SE + +F
Sbjct: 120 QQDIRATEIDKVKVAESFRVGDIVRAVVISLGDERSYYLSTARNELGVVMAESEWGNQMF 179
Query: 166 RSSEKLTNDIEFLKQEKLKLYEEL 189
S + D E +E K+ + +
Sbjct: 180 PVSWREFEDPEMGTREVRKVAKPI 203
>gi|403178800|ref|XP_003337173.2| hypothetical protein PGTG_18773 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164480|gb|EFP92754.2| hypothetical protein PGTG_18773 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 243
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 1 MSNP----PICIPGQRI-----CQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNK 51
+SNP P IPGQ + Q + G GT+ RQG +Y+++ G + +
Sbjct: 48 ISNPKTSSPSVIPGQELITSDESQPSATYQCGPGTFERQGKVYASVVG--------QPVR 99
Query: 52 EVSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTAL--SRTFRALLRRE 109
I V + VP G +V I V + +I V + L + + +R +
Sbjct: 100 NAGTISVECSSRCAKVPVVGTIVIGMITKVTKPQAHVSIIMVDDLPLPVGQELQGAIRSQ 159
Query: 110 NVRATEIDRIEMYKCYRPGDIILA---RLPLKELHSYQLSTAENELGVVIA 157
+VR + D++ ++ CYRPGDI+ A LP + Y L+T N LGVV A
Sbjct: 160 DVRQVDKDKVIIWDCYRPGDIVRAEVISLPTSAM-GYLLATFRNHLGVVFA 209
>gi|116197969|ref|XP_001224796.1| hypothetical protein CHGG_07140 [Chaetomium globosum CBS 148.51]
gi|88178419|gb|EAQ85887.1| hypothetical protein CHGG_07140 [Chaetomium globosum CBS 148.51]
Length = 200
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 29/174 (16%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+ IPGQ + S G GT++ LY++L G V I + +
Sbjct: 11 LAIPGQ-LLGPASRYQPGPGTHLHNANLYASLLGHVHITQPAQQPPRQRA---------- 59
Query: 66 IVPTPGDVVTA---------------RIMAVQQHLCKAHVISVGNTALSRTFRALLRREN 110
P P +T ++V ++ G++ L ++ L+R ++
Sbjct: 60 --PGPAKRLTKITPAPAPAPTPPAERPTISVAVADAVVAILVCGDSVLEAEWQGLIRVQD 117
Query: 111 VRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
VRATE DR+ +Y+ +RPGD++ A + L + +Y LST NELGVV+A+SEA +
Sbjct: 118 VRATEKDRVRIYESFRPGDVVRAEVISLGDQANYYLSTTRNELGVVLAVSEAGN 171
>gi|50291197|ref|XP_448031.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527342|emb|CAG60982.1| unnamed protein product [Candida glabrata]
Length = 285
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 91 ISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAE 149
+S ++ L TFR ++R +++RATE DR+++ + Y+PGDII A+ L L + ++Y L+TA
Sbjct: 180 VSQASSDLGETFRGMIRSQDIRATERDRVKVIESYKPGDIIRAQILSLGDGNNYYLTTAR 239
Query: 150 NELGVVIALSEAAS 163
N+LGVV A S+ +
Sbjct: 240 NDLGVVFARSDNGA 253
>gi|189199682|ref|XP_001936178.1| exosome component 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983277|gb|EDU48765.1| exosome component 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 211
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 25/183 (13%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTV------------------- 41
M+ P I +PGQ + + SD + G GT++ + +Y+++AG V
Sbjct: 1 MTLPQIALPGQFLAK-TSDYLPGPGTHIHESQIYASIAGLVISTPSSSTANTTSKSSNLT 59
Query: 42 ---SINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTAL 98
SI + + + ++ +S ++PT V RI + ++ + N
Sbjct: 60 PLLSITRP-PSSTDPGILGPNSGAGIPLLPTVSSTVLVRITRLGSRFASCEILVIDNLVC 118
Query: 99 SRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIA 157
F A +RRE++RATE D+I++ + +R GD++ + L + +Y ++T NE GVV+A
Sbjct: 119 REAFVAQIRREDIRATEKDKIKIEESFRVGDLVRGTVISLGDSGNYYVATDSNEYGVVLA 178
Query: 158 LSE 160
SE
Sbjct: 179 RSE 181
>gi|403216254|emb|CCK70751.1| hypothetical protein KNAG_0F00820 [Kazachstania naganishii CBS
8797]
Length = 248
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVI 156
L TFR ++R ++VRA + D+++M +C++PGDII A+ L L + ++Y L+TA N+LGVV
Sbjct: 153 LGETFRGIVRSQDVRAVDRDKVKMIECFKPGDIIKAQVLSLGDGNNYYLTTARNDLGVVF 212
Query: 157 ALSE--AASLFRSSEKLT 172
A S+ A L +++ T
Sbjct: 213 ARSDNGAGGLMYATDWQT 230
>gi|323508241|emb|CBQ68112.1| related to CSL4-exosome core component [Sporisorium reilianum SRZ2]
Length = 263
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 33/166 (19%)
Query: 23 GRGTYVRQGYLYSTLAG--------TVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVV 74
G GTY R Y+ S+L G + S + + I +S + +VP P V
Sbjct: 32 GTGTYARGDYILSSLVGYESRTPSSSTSTATKPSTSGKTETISISGVENRFVVPRPDSTV 91
Query: 75 TAR------------IMAVQQHLCKAHVIS--------VGNTALSRT----FRALLRREN 110
AR I+ V C + + +GN A F+ ++R ++
Sbjct: 92 IARVTRVTPRQAYLSILIVDGQPCGSSSSTASTFVQSGLGNHAAGEGEGIDFQGVVRSQD 151
Query: 111 VRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVV 155
VR+TE D++++ C+RPGDI+ A + L + SY LSTA N LGV+
Sbjct: 152 VRSTEKDKVKLADCFRPGDIVRATVISLGDARSYYLSTAGNSLGVI 197
>gi|396477146|ref|XP_003840207.1| similar to exosome complex subunit Csl4 [Leptosphaeria maculans
JN3]
gi|312216778|emb|CBX96728.1| similar to exosome complex subunit Csl4 [Leptosphaeria maculans
JN3]
Length = 212
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 24/188 (12%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTV--SINKHVEDNKEVS---- 54
M P + +PGQ + D + G GT++ + +Y+++AG V S H S
Sbjct: 1 MGLPSLALPGQLLGHTD-KYLPGPGTHIHESNIYASIAGPVLSSPPSHNPPTPSSSKAHP 59
Query: 55 ----------------VIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTAL 98
++ SS ++PT +V RI + ++ + +
Sbjct: 60 TPLLSVARPPPTSSPGILGPSSGGGTALLPTISSIVLCRITRLGPRFATCDILVIDDVVC 119
Query: 99 SRTFRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIA 157
F+ +RRE++RATE D+I+M + +R GD++ + L + +Y ++T NELGVV+A
Sbjct: 120 REAFQGQIRREDIRATEKDKIKMEESFRVGDLVRGVVISLGDQSNYYVATERNELGVVLA 179
Query: 158 LSEAASLF 165
SE L
Sbjct: 180 RSEEGRLM 187
>gi|70997093|ref|XP_753301.1| exosome complex subunit Csl4 [Aspergillus fumigatus Af293]
gi|66850937|gb|EAL91263.1| exosome complex subunit Csl4, putative [Aspergillus fumigatus
Af293]
Length = 249
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 59/220 (26%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVS---- 59
P + IPGQR+ + S G GT+V+ +Y+++AG V + + +K S++ VS
Sbjct: 6 PSLAIPGQRLGPVSS-YSAGPGTHVQNANIYASIAGPVVLQQAQPSSKLKSILSVSRNLP 64
Query: 60 ----------------SYKKEV---IVPTPGDVVTARIMAVQQHLCKAHVI-----SVG- 94
+ K ++ +P +V AR+ VQ+ ++ S G
Sbjct: 65 RKTDPSTSTTPMKATTTTKPKLRYNTLPAVDSIVLARVTRVQKRQATVSILVVLDESAGS 124
Query: 95 -NTALSRT---------------------------FRALLRRENVRATEIDRIEMYKCYR 126
+ S+T F+AL+R+E+VRA E DR+ M + +R
Sbjct: 125 QDPDPSKTASDNDNIVSILASAANPENHSNSDELRFQALIRKEDVRAVEKDRVVMDEMFR 184
Query: 127 PGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
GDI+ + L + Y L+TA N+LGVV+A SEA ++
Sbjct: 185 VGDIVRGSVISLGDQSFYYLTTARNDLGVVMARSEAGNMM 224
>gi|330920336|ref|XP_003298966.1| hypothetical protein PTT_09856 [Pyrenophora teres f. teres 0-1]
gi|311327551|gb|EFQ92934.1| hypothetical protein PTT_09856 [Pyrenophora teres f. teres 0-1]
Length = 211
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 25/183 (13%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTV------------------- 41
M+ P I +PGQ + + SD + G GT++ + +Y+++AG V
Sbjct: 1 MTLPQIALPGQFLAK-TSDYLPGPGTHIHESQIYASIAGPVISTPSSSTTNSTSKSSNLT 59
Query: 42 ---SINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTAL 98
SI + + + ++ +S ++PT V RI + ++ + N
Sbjct: 60 PLLSITRP-PSSTDPGILGPNSGAGIPLLPTVSSTVLVRITRLGPRFASCEILVIDNLVC 118
Query: 99 SRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIA 157
F A +RRE++RATE D+I++ + +R GD++ + L + +Y ++T NE GVV+A
Sbjct: 119 REAFVAQIRREDIRATEKDKIKIEESFRVGDLVRGTVISLGDSGNYYVATDANEYGVVLA 178
Query: 158 LSE 160
SE
Sbjct: 179 RSE 181
>gi|392571253|gb|EIW64425.1| hypothetical protein TRAVEDRAFT_139212 [Trametes versicolor
FP-101664 SS1]
Length = 185
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 19/162 (11%)
Query: 5 PICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKE 64
PI +P + QL G GTY+R G + ++L G + S +E+ +
Sbjct: 11 PIPLPRGPVPQL------GGGTYIRDGTVRASLVGVPQYSG--------STLEIKRTRPH 56
Query: 65 VIVPTPGDVVTARI--MAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
P P VV + ++ Q + V+ F ++R ++VRATE D++++
Sbjct: 57 P--PAPNSVVLGSVTRLSPLQAVLSISVVDGVPLPAGEEFTGVIRVQDVRATEKDKVKIA 114
Query: 123 KCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
C+R GD+I L L + SY ++TA N+LGV+ A SEA +
Sbjct: 115 DCFRGGDVIRGLVLSLGDARSYYVTTARNDLGVIFATSEAGA 156
>gi|501310688|dbj|GAC99446.1| likely exosome component Csl4p [Pseudozyma hubeiensis SY62]
Length = 257
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 34/170 (20%)
Query: 23 GRGTYVRQGYLYSTLAG---------TVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDV 73
G GTY R Y+ S+L G + S N + + +S + +VP P
Sbjct: 32 GLGTYARGDYILSSLVGYEARAPSTSSSSTNTSKPKAPQSETVSISGVENRFVVPRPDST 91
Query: 74 VTAR------------IMAVQQHLCKAHVI--------SVGNTALSRT----FRALLRRE 109
V AR I+ V C + +GN A F+ ++R +
Sbjct: 92 VIARVTRVTPRQAYLSILIVDGQPCGSSSSTSSTFVQSGLGNHAAGEGEGIDFQGVVRSQ 151
Query: 110 NVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIAL 158
+VR+TE D++++ C+RPGDI+ A + L + SY LSTA N LGV+ AL
Sbjct: 152 DVRSTEKDKVKLADCFRPGDIVRATVISLGDARSYYLSTAGNSLGVIYAL 201
>gi|440635670|gb|ELR05589.1| hypothetical protein GMDG_01780 [Geomyces destructans 20631-21]
Length = 218
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 30/189 (15%)
Query: 2 SNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSIN---KHVEDNKEVSVI-- 56
+ P I IPGQ + + + G GT++ +++++ G + + K V K ++ I
Sbjct: 4 TPPSIAIPGQPLGA-STKYIPGPGTHLHLSQIHASILGPIHLTHPPKPVGPQKRLTKITP 62
Query: 57 ----------------------EVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVG 94
EV + K+E I P +V R+ + ++ VG
Sbjct: 63 SAPTPLPTISVLRSPALDTKPGEVQTAKREAI-PEVSSIVLCRVTRITARQASVAILVVG 121
Query: 95 NTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELG 153
T ++ ++R ++VRATE DR+++ + +RPGD++ A + L + +Y LSTA N+LG
Sbjct: 122 ETVGEGEWQGVVRVQDVRATEKDRVKIAESFRPGDVVRAIVISLGDQSNYYLSTARNDLG 181
Query: 154 VVIALSEAA 162
V++A S+A
Sbjct: 182 VLMATSDAG 190
>gi|291510252|gb|ADE10082.1| S1 CSL4 [Tremella fuciformis]
Length = 190
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 89/172 (51%), Gaps = 20/172 (11%)
Query: 1 MSNPPICIPGQRICQ-LDSDIVG--GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIE 57
MS PI +PGQ + + L + G G Y +G + S + G + D VSV+
Sbjct: 1 MSTAPILLPGQPLPRNLTQPPLPKCGPGCYEYEGRILSNIVG-----RPKRDGAVVSVVG 55
Query: 58 VSSYKKEVIVPTPGDVVTARI--MAVQQHLCKAHVIS---VGNTALSRTFRALLRRENVR 112
++E VP +V + + QQ + V++ V T S F ++R ++R
Sbjct: 56 ----REEAAVPDVDAIVIGMVTRLTPQQAVVTIEVVNDRPVPET--SEAFTGVVRIADIR 109
Query: 113 ATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
TE D+I+M +C+R GD++ A+ L L + SY LSTA NELGV+ A SEA +
Sbjct: 110 LTERDKIKMAECFRLGDMVKAKVLSLGDARSYYLSTAANELGVIYATSEAGN 161
>gi|320583459|gb|EFW97672.1| exosome 3'-5 exonuclease subunit ski4 (Csl4) [Ogataea
parapolymorpha DL-1]
Length = 208
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 20/180 (11%)
Query: 6 ICIPGQRICQL---DSDIVGGRGTY----VRQGYLYSTLAGTVSINKHVEDNKEVSVIEV 58
+ +PGQ I + + V G T G + + T + H N S + V
Sbjct: 4 LVLPGQPIVPVHTTNHTYVSGSNTLQIERTVDGTVVPCIVATTLGSVHFTTNDNTSTVSV 63
Query: 59 SSYKKEV--IVPTPGDVVTARIMAVQQ---HLCKAHV----ISVGNTALS---RTFRALL 106
S ++ P+ DVV A++ + HL HV I + N L+ F+A++
Sbjct: 64 QSSGAKIANFTPSENDVVIAKVTKISSNKVHLDILHVQDASIHLSNLLLNDYGENFKAVI 123
Query: 107 RRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
R ++R+T+ D++++ +C+RPGDI+ A + L + +Y LSTA N+LGV+ A S++ L
Sbjct: 124 RSSDIRSTDRDKVKVGECFRPGDIVKALVISLGDGINYYLSTARNDLGVIHARSKSGKLL 183
>gi|149244958|ref|XP_001527013.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449407|gb|EDK43663.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 314
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 6/87 (6%)
Query: 78 IMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LP 136
I +V + A + +G FR ++R +++R+TE DR+ + +C++PGDI+ A+ L
Sbjct: 201 IQSVASNTSNAQIYDIG-----ENFRGIIRSQDIRSTERDRVVVGECFKPGDIVRAQILS 255
Query: 137 LKELHSYQLSTAENELGVVIALSEAAS 163
L + +Y LSTA+N LGVV A SE +
Sbjct: 256 LGDGQNYYLSTAKNNLGVVFAKSEGGA 282
>gi|71004342|ref|XP_756837.1| hypothetical protein UM00690.1 [Ustilago maydis 521]
gi|46095639|gb|EAK80872.1| hypothetical protein UM00690.1 [Ustilago maydis 521]
Length = 307
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 42/183 (22%)
Query: 23 GRGTYVRQGYLYSTLAGTVS-----------------INKHVEDNKEVSVIEVSSYKKEV 65
G GTY R Y+ S+L G S K + ++ +S +
Sbjct: 78 GLGTYARGDYILSSLVGYESRTLSGSSSSSSSTLPNQTTKSKTGLAQTEIVSISGVENRF 137
Query: 66 IVPTPGDVVTAR------------IMAVQQHLCKAHVI--------SVGNTALSRT---- 101
+VP P V AR I+ V C + +GN A
Sbjct: 138 VVPRPDSTVIARVTRVTPRQAYLSILIVDGQPCGSSSSTSSTFVQSGLGNHAAGEGEGVD 197
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
F+ ++R ++VR+TE D++++ C+RPGDI+ A + L + SY LSTA N LGV+ A S
Sbjct: 198 FQGVVRSQDVRSTEKDKVKIADCFRPGDIVRATVISLGDARSYYLSTAGNSLGVIYATSA 257
Query: 161 AAS 163
++
Sbjct: 258 TSA 260
>gi|326483544|gb|EGE07554.1| 3'-5' exoribonuclease CSL4 [Trichophyton equinum CBS 127.97]
Length = 247
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 92/220 (41%), Gaps = 57/220 (25%)
Query: 2 SNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDN----KEVSVIE 57
S P I +PG R+ S G GTYVR + +++AG V + K ++
Sbjct: 4 SIPSIAVPGLRLGD-SSTFTSGPGTYVRDSSICASIAGPVILKTDDRGTDPKRKPRKILT 62
Query: 58 VS------------------SYKKEVIVPTPGDVVTARIMAVQQH--------------- 84
VS S K +P +V AR+ VQ+
Sbjct: 63 VSRSPQTDTPNHTQKQQQAKSPLKFNTLPAVDSIVLARVTRVQKRQATVSILMVIDDQNN 122
Query: 85 ----------LCKAHVI--------SVGNTALSRTFRALLRRENVRATEIDRIEMYKCYR 126
L A +I S NTA F+A++R+E+VRA E DR+ M +R
Sbjct: 123 DLIDTNMRTILSSAPIITTAGTDSTSTSNTADDLRFQAIIRKEDVRAVEKDRVVMEDMFR 182
Query: 127 PGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
GDI+ A + + + SY STA NELGVV+A SE ++
Sbjct: 183 VGDIVRAYVISVGDQSSYYCSTARNELGVVMARSEGGNMM 222
>gi|308805945|ref|XP_003080284.1| exoribonuclease-related (ISS) [Ostreococcus tauri]
gi|116058744|emb|CAL54451.1| exoribonuclease-related (ISS) [Ostreococcus tauri]
Length = 182
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 56 IEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISV-GNTALSRTFRALLRRENVRAT 114
+ V + ++VP GD V R++ V + + ++ G + F +RR++VRA
Sbjct: 44 VGVERARGPLVVPRVGDDVHGRVLRVLERAAHVDIAAINGRAPVGGGFAGTIRRQDVRAH 103
Query: 115 EIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIA 157
+D +E+ +C+R GD++ A+ L L + S+ L+TA +ELGVV A
Sbjct: 104 AVDSVELDRCFRAGDVVRAKVLSLGDARSFYLTTASDELGVVRA 147
>gi|294654683|ref|XP_456747.2| DEHA2A09570p [Debaryomyces hansenii CBS767]
gi|199429067|emb|CAG84708.2| DEHA2A09570p [Debaryomyces hansenii CBS767]
Length = 298
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVI 156
L TF+ ++R ++VR+T+ DR+++ +C++PGDI+ A + L + +Y LSTA+N+LGVV
Sbjct: 201 LGETFKGIIRTQDVRSTDRDRVKIIECFKPGDIVRAVIISLGDGSNYYLSTAKNDLGVVF 260
Query: 157 ALSEAAS 163
A SE +
Sbjct: 261 ARSEGGA 267
>gi|409083427|gb|EKM83784.1| hypothetical protein AGABI1DRAFT_110396 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 181
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 5 PICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKE 64
PI IP QL G GTY R + S++ G + +SV V Y
Sbjct: 9 PIPIPRGPALQL------GSGTYSRDNEVRSSILGVPQF-----EGSTLSVPRVRPYP-- 55
Query: 65 VIVPTPGDVVTARI--MAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
P+P VV + ++ Q + V+ F ++R ++VRATE DR+++
Sbjct: 56 ---PSPNSVVLGTVTRLSPLQAMISISVVDGVPLPAGEEFTGVIRAQDVRATEKDRVKIG 112
Query: 123 KCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
C+R GD++ + L + SY +STA N+LGV+ A SEA +
Sbjct: 113 DCFRGGDVVRGLVISLGDARSYFVSTARNDLGVIFATSEAGA 154
>gi|523422985|emb|CDF89275.1| ZYBA0S04-00408g1_1 [Zygosaccharomyces bailii CLIB 213]
Length = 282
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 102/236 (43%), Gaps = 83/236 (35%)
Query: 4 PPICIPGQRICQLDSDI------------VGGRGT----YVRQG----YLYSTLAGTVSI 43
P + PG IC D D+ V GRG Y +G L +TL G V +
Sbjct: 13 PQVVFPGYLICP-DYDVKQKNEIELVYKFVCGRGAQMMNYNYEGKDIKALSATLLGNVKL 71
Query: 44 ----------NKHVEDNK---------EVSVIEVSSYKKEVIV--------PTPGDVVTA 76
NK + D+K +VSV + + ++E V P GD+V
Sbjct: 72 EELKPSNGGENKEIPDDKSQQRITKILKVSVQQHNQTEEETNVKEDFTDNLPKEGDIVLG 131
Query: 77 R------------IMAVQQHLCK---------AHVISVGNTA-------------LSRTF 102
R I+AV+ H + V++ G + L TF
Sbjct: 132 RVTRISLQRANLEILAVENHTVPTDSGVGSNGSGVVAPGGGSGATTFSVSHVSSDLGETF 191
Query: 103 RALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIA 157
R ++R ++VRATE D ++M + ++PGDI+ A+ L L + +Y LSTA+NELGVV A
Sbjct: 192 RGIIRSQDVRATERDTVKMIESFKPGDIVRAQVLSLGDGTNYYLSTAKNELGVVFA 247
>gi|19076010|ref|NP_588510.1| exosome subunit Csl4 (predicted) [Schizosaccharomyces pombe 972h-]
gi|28380026|sp|O59821.2|CSL4_SCHPO RecName: Full=Exosome complex component csl4
gi|3395592|emb|CAA20134.1| exosome subunit Csl4 (predicted) [Schizosaccharomyces pombe]
Length = 181
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+ +PGQ + + + G GT R Y+ ST G + D ++ SV ++
Sbjct: 3 LVLPGQVVARGAPN---GEGTVKRGDYIISTRTG-------IFDPEKNSVTYPRKVEETA 52
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
++P G +V AR+ + ++ V + F+ ++ +++RATE +++++ +
Sbjct: 53 VLPNVGSIVLARVSRINARQATVNISVVDDVCTKDEFQGVIHVQDIRATEKNKVKVQNSF 112
Query: 126 RPGDIILAR-LPLKELHSYQLSTAENELGVVIALS 159
RPGDI+ A + L + SY L+TA N+LGV+ A S
Sbjct: 113 RPGDIVRALVISLGDGSSYFLTTARNDLGVIFAQS 147
>gi|238500117|ref|XP_002381293.1| exosome complex subunit Csl4, putative [Aspergillus flavus
NRRL3357]
gi|220693046|gb|EED49392.1| exosome complex subunit Csl4, putative [Aspergillus flavus
NRRL3357]
Length = 257
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 67/228 (29%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTV-------------------SIN 44
P + IPGQR+ + S G GT+V+Q +Y+++AG V SI
Sbjct: 6 PALAIPGQRLGPVTS-YSAGPGTHVQQSNVYASIAGPVVVEPAHPGSKGKATLSVSRSIR 64
Query: 45 KHVEDNKEVSVIEVSSYKKEVIVPTP------------GDVVTARIMAVQQHLCKAHVIS 92
N V K TP VV AR+ VQ+ ++
Sbjct: 65 APGTGNASKPVTTAPGAKPAATSATPKPKVKYNTLPAVDSVVLARVTRVQKRQATVSILV 124
Query: 93 V----GNT---ALSRT---------------------------FRALLRRENVRATEIDR 118
V G+T S+T F+AL+R+E+VRA E DR
Sbjct: 125 VLDESGSTQGVTPSQTTSDNDNIEAILSSAANPENHSSSDELRFQALIRKEDVRAVEKDR 184
Query: 119 IEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
+ M + +R GDI+ + L + Y L+TA N+LGVV+A SEA ++
Sbjct: 185 VVMDEMFRVGDIVRGTVISLGDQSFYYLTTARNDLGVVMARSEAGNMM 232
>gi|169779469|ref|XP_001824199.1| exosome complex subunit Csl4 [Aspergillus oryzae RIB40]
gi|83772938|dbj|BAE63066.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391870328|gb|EIT79513.1| exosomal 3'-5' exoribonuclease complex, subunit ski4 [Aspergillus
oryzae 3.042]
Length = 257
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 93/228 (40%), Gaps = 67/228 (29%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTV-------------------SIN 44
P + IPGQR+ + S G GT+V+Q +Y+++AG V SI
Sbjct: 6 PALAIPGQRLGPVTS-YSAGPGTHVQQSNVYASIAGPVVVEPAQPGSKGKATLSVSRSIR 64
Query: 45 KHVEDNKEVSVIEVSSYKKEVIVPTP------------GDVVTARIMAVQQHLCKAHVIS 92
N V K TP VV AR+ VQ+ ++
Sbjct: 65 APGTGNASKPVTTAPGAKPAATSATPKPKVKYNTLPAVDSVVLARVTRVQKRQATVSILV 124
Query: 93 V----GNTA-----------------LSRT-------------FRALLRRENVRATEIDR 118
V G+T LS F+AL+R+E+VRA E DR
Sbjct: 125 VLDESGSTQGVNPSQTTSDNDNIEAILSSAANPENHSSSDELRFQALIRKEDVRAVEKDR 184
Query: 119 IEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
+ M + +R GDI+ + L + Y L+TA N+LGVV+A SEA ++
Sbjct: 185 VVMDEMFRVGDIVRGTVISLGDQSFYYLTTARNDLGVVMARSEAGNMM 232
>gi|443914756|gb|ELU36512.1| exoribonuclease [Rhizoctonia solani AG-1 IA]
Length = 194
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 22/174 (12%)
Query: 8 IPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIV 67
+PGQ + QL S + GTY R G S+L G S E +I V++ + +
Sbjct: 6 LPGQPL-QLQSPVTS-SGTYGRNGVTRSSLLGIKS---------EGGIIPVTAGRAQP-- 52
Query: 68 PTPGDVVTARIMAVQQHLCKAHVISVGNTALSRT--FRALLRRENVRATEIDRIEMYKCY 125
P+PG V I + + V L F ++R ++VR+TE D++++ C+
Sbjct: 53 PSPGVTVIGTITRLSPLQATMSITVVDGIPLPHGEEFTGVIRSQDVRSTEKDKVKIADCF 112
Query: 126 RPGDIILARLPLKELHSYQLSTAENELGVVIALSEAAS--LFRSSEKLTNDIEF 177
R GD++ + SY +ST N+LGV+ A SEA L + + N + F
Sbjct: 113 RGGDVVRG-----DSRSYYVSTTRNDLGVIFATSEAGKDHLLFAKPTILNRLSF 161
>gi|521585423|gb|EPQ29112.1| hypothetical protein PFL1_03400 [Pseudozyma flocculosa PF-1]
Length = 263
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 81/182 (44%), Gaps = 40/182 (21%)
Query: 23 GRGTYVRQGYLYSTLAG----TVSINKH-----------VEDNKEVSVIEVSSYKKEVIV 67
G GTY R ++ S+L G TV + + + V + +V
Sbjct: 32 GPGTYTRGDHILSSLVGYEQRTVPAAPSSSLLKGKAKGAAAPAVQAATLSVHGAENSFVV 91
Query: 68 PTPGDVVTARIMAV---QQHL---------CKAHVISV--------GNTALSRT----FR 103
P P +V AR+ V Q HL C + + GN A F+
Sbjct: 92 PRPDSIVIARVTRVTPRQAHLSILIVDGQPCGSSSSTSSASIATGRGNHAAGEGEGTDFQ 151
Query: 104 ALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
++R ++VR TE D++ + C+RPGDI+ A + L + SY LSTA N LGV+ A S ++
Sbjct: 152 GVVRSQDVRNTEKDKVRLGDCFRPGDIVRASVISLGDARSYYLSTAANNLGVIYATSSSS 211
Query: 163 SL 164
SL
Sbjct: 212 SL 213
>gi|190409203|gb|EDV12468.1| 3'-5' exoribonuclease CSL4 [Saccharomyces cerevisiae RM11-1a]
gi|207341876|gb|EDZ69814.1| YNL232Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259149134|emb|CAY82376.1| Csl4p [Saccharomyces cerevisiae EC1118]
gi|323335876|gb|EGA77154.1| Csl4p [Saccharomyces cerevisiae Vin13]
gi|323346808|gb|EGA81087.1| Csl4p [Saccharomyces cerevisiae Lalvin QA23]
gi|365763481|gb|EHN05009.1| Csl4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 292
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 91 ISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAE 149
+S ++ L TFR ++R ++VR+T+ DR+++ +C++PGDI+ A+ L L + +Y L+TA
Sbjct: 190 VSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTAR 249
Query: 150 NELGVVIA 157
N+LGVV A
Sbjct: 250 NDLGVVFA 257
>gi|323303336|gb|EGA57132.1| Csl4p [Saccharomyces cerevisiae FostersB]
Length = 292
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 91 ISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAE 149
+S ++ L TFR ++R ++VR+T+ DR+++ +C++PGDI+ A+ L L + +Y L+TA
Sbjct: 190 VSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTAR 249
Query: 150 NELGVVIA 157
N+LGVV A
Sbjct: 250 NDLGVVFA 257
>gi|6324097|ref|NP_014167.1| Csl4p [Saccharomyces cerevisiae S288c]
gi|1730832|sp|P53859.1|CSL4_YEAST RecName: Full=Exosome complex component CSL4; AltName: Full=CEP1
synthetic lethal protein 4
gi|1183982|emb|CAA93366.1| N1154 [Saccharomyces cerevisiae]
gi|1302259|emb|CAA96137.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151944314|gb|EDN62592.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|256272377|gb|EEU07360.1| Csl4p [Saccharomyces cerevisiae JAY291]
gi|285814432|tpg|DAA10326.1| TPA: Csl4p [Saccharomyces cerevisiae S288c]
gi|349580716|dbj|GAA25875.1| K7_Csl4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 292
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 91 ISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAE 149
+S ++ L TFR ++R ++VR+T+ DR+++ +C++PGDI+ A+ L L + +Y L+TA
Sbjct: 190 VSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTAR 249
Query: 150 NELGVVIA 157
N+LGVV A
Sbjct: 250 NDLGVVFA 257
>gi|448262641|pdb|4IFD|I Chain I, Crystal Structure Of An 11-subunit Eukaryotic Exosome
Complex Bound To Rna
Length = 301
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 91 ISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAE 149
+S ++ L TFR ++R ++VR+T+ DR+++ +C++PGDI+ A+ L L + +Y L+TA
Sbjct: 199 VSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTAR 258
Query: 150 NELGVVIA 157
N+LGVV A
Sbjct: 259 NDLGVVFA 266
>gi|392297120|gb|EIW08221.1| Csl4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 292
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 91 ISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAE 149
+S ++ L TFR ++R ++VR+T+ DR+++ +C++PGDI+ A+ L L + +Y L+TA
Sbjct: 190 VSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTAR 249
Query: 150 NELGVVIA 157
N+LGVV A
Sbjct: 250 NDLGVVFA 257
>gi|71032387|ref|XP_765835.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352792|gb|EAN33552.1| hypothetical protein TP01_0308 [Theileria parva]
Length = 178
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+ +PG + + SD V R YV+ +YS++ G+ +H+ N E+SV V
Sbjct: 3 VVLPGMLLGTV-SDYVPLRNVYVKDSIIYSSVLGS----QHISPNNEISV-----ESGCV 52
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
VP G VV A+I V + H+I+V L ++A L NV ++ I MY+ +
Sbjct: 53 RVPYVGAVVVAQISRVHINKADCHIIAVNGRTLKDQYKASLTSNNVLESKSIEILMYEWF 112
Query: 126 RPGDIILARLPLK-ELHSYQLSTAENELGVV 155
RPGD I A++ + + LSTA LGVV
Sbjct: 113 RPGDFIKAKVIYAGDGKVFTLSTAGIGLGVV 143
>gi|254584610|ref|XP_002497873.1| ZYRO0F15488p [Zygosaccharomyces rouxii]
gi|238940766|emb|CAR28940.1| ZYRO0F15488p [Zygosaccharomyces rouxii]
Length = 294
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 91 ISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAE 149
+S ++ L TFR ++R ++VRATE D ++M + Y+PGDI+ A+ L L + +Y L+TA+
Sbjct: 191 VSQASSDLGETFRGIIRSQDVRATERDSVKMIESYKPGDIVRAQVLSLGDGTNYYLTTAK 250
Query: 150 NELGVVIA 157
NELGVV A
Sbjct: 251 NELGVVFA 258
>gi|365758756|gb|EHN00583.1| Csl4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 119
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 91 ISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAE 149
+S ++ L TFR ++R ++VR+T+ DR+++ +C++PGDI+ A+ L L + +Y L+TA
Sbjct: 17 VSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTAR 76
Query: 150 NELGVVIA 157
N+LGVV A
Sbjct: 77 NDLGVVFA 84
>gi|327292632|ref|XP_003231014.1| exosome complex subunit Csl4 [Trichophyton rubrum CBS 118892]
gi|326466820|gb|EGD92273.1| exosome complex subunit Csl4 [Trichophyton rubrum CBS 118892]
Length = 247
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 57/218 (26%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSI---NKHVEDNKEVSVI---- 56
P I +PG R+ S G GTYVR + +++ G V + +K + ++ I
Sbjct: 6 PSIAVPGLRLGD-SSTFSSGPGTYVRDSSICASIPGPVILKTDDKGTDPKRKPRKILTVS 64
Query: 57 ---------------EVSSYKKEVIVPTPGDVVTARIMAVQQH----------------- 84
+ S K +P +V AR+ VQ+
Sbjct: 65 RSPQTDTPNSTQNQQQTKSPLKFNTLPAVDSIVLARVTRVQKRQATVSILMVVDDQNNDL 124
Query: 85 --------LCKAHVI--------SVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPG 128
L A +I S NTA F+A++R+E+VRA E DR+ M +R G
Sbjct: 125 IDTNMRTILSSAPIITTAGTDSTSTSNTADDLRFQAIIRKEDVRAVEKDRVVMEDMFRVG 184
Query: 129 DIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
DI+ A + + + SY STA NELGVV+A SE ++
Sbjct: 185 DIVRAYVISVGDQSSYYCSTARNELGVVMARSEGGNMM 222
>gi|444315450|ref|XP_004178382.1| hypothetical protein TBLA_0B00180 [Tetrapisispora blattae CBS 6284]
gi|387511422|emb|CCH58863.1| hypothetical protein TBLA_0B00180 [Tetrapisispora blattae CBS 6284]
Length = 298
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 99 SRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIA 157
S FR +LR ++VRATE D ++M CY+PGDI+ A+ L L + +Y ++TA N+LGVV A
Sbjct: 204 SEPFRGILRSQDVRATERDSVKMVDCYKPGDIVRAQVLSLGDGTNYYVTTARNDLGVVFA 263
>gi|115399486|ref|XP_001215332.1| hypothetical protein ATEG_06154 [Aspergillus terreus NIH2624]
gi|114192215|gb|EAU33915.1| hypothetical protein ATEG_06154 [Aspergillus terreus NIH2624]
Length = 248
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 58/219 (26%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEV----- 58
P + IPGQ + + S G GT+V+ +Y+++AG V + + + K S + V
Sbjct: 6 PTLAIPGQCLGSIAS-YSAGPGTHVQNANIYASIAGPVVVEQTPANAKGKSTVSVVRSIA 64
Query: 59 ----SSYKKEV-------------IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRT 101
S+ K V +P VV AR+ VQ+ ++ V + + S
Sbjct: 65 KRAASTTAKPVAGAGSAKPKPKYNTLPAVDSVVLARVTRVQKRQVTVSILVVLDESASTQ 124
Query: 102 ----------------------------------FRALLRRENVRATEIDRIEMYKCYRP 127
F+AL+R+E+VRA E DR+ M + +R
Sbjct: 125 PLNPSQTTSDNDDVAAILTSAANPENHSSSDELRFQALIRKEDVRAVEKDRVVMDEMFRV 184
Query: 128 GDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
GDI+ + L + Y L+TA N+LGVV+A SEA ++
Sbjct: 185 GDIVRGTVISLGDQSFYYLTTARNDLGVVMARSEAGNMM 223
>gi|190345945|gb|EDK37918.2| hypothetical protein PGUG_02016 [Meyerozyma guilliermondii ATCC
6260]
Length = 267
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 69/127 (54%), Gaps = 9/127 (7%)
Query: 40 TVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVT--ARIMAVQQHLCKAHVISVGNTA 97
+V NK+V + + + ++++ V V +T A + + Q L KA +G
Sbjct: 115 SVEDNKNVLSDSGIGAVGTTAHQ-SVAVSGGASALTSQAAVASFQSTLGKAVAADLG--- 170
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILARL-PLKELHSYQLSTAENELGVVI 156
TF+ ++R ++VR T+ DR+++ C+RPGDI+ + L + +Y L+TA N+LGVV
Sbjct: 171 --ETFKGIIRTQDVRLTDRDRVQIVDCFRPGDIVRGMISSLGDGSNYYLTTARNDLGVVF 228
Query: 157 ALSEAAS 163
A E +
Sbjct: 229 ARGEGGA 235
>gi|341878804|gb|EGT34739.1| CBN-EXOS-1 protein [Caenorhabditis brenneri]
Length = 226
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 25/172 (14%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKE-VSVIEVSSYKKEV-- 65
PG ++ + G G Y +++++AG V + H + + V VIEV + ++
Sbjct: 10 PGDKVLDSIGNYRMGNGLYEANRRIFASVAGYVKVYGHKDKSDNLVQVIEVRRSEDQLEN 69
Query: 66 -IVPTPGDVVTARIMAV--------------QQHLCKAHVISVGNTALSRTFRALLRREN 110
++P G VVTA++MAV K +IS+G+ + F ALL ++
Sbjct: 70 ELLPYDGAVVTAKVMAVGLRYRHFFILYLRDHSRFAKCDIISIGDRVYKKRFSALLPKKK 129
Query: 111 VRATEIDRIEMYKCY-RPGDIILARL----PLKELHSYQLSTAENELGVVIA 157
+R E + E +K + RP D ILA++ +K+ + LS AE+ELGVV+
Sbjct: 130 LRPLEPELSEPFKNFVRPNDYILAKVCDDAGIKD--KFVLSIAEDELGVVLC 179
>gi|410075571|ref|XP_003955368.1| hypothetical protein KAFR_0A07990 [Kazachstania africana CBS 2517]
gi|372461950|emb|CCF56233.1| hypothetical protein KAFR_0A07990 [Kazachstania africana CBS 2517]
Length = 271
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 35/139 (25%)
Query: 60 SYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISV----------------GNTA------ 97
S +I+P GDVV RI + +++V G TA
Sbjct: 104 SNSGNIILPKEGDVVLCRITRITLQRANVEIVAVENKNIPVDGGVGSNGLGETAVGGGSG 163
Query: 98 ------------LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQ 144
L TFR ++R ++VR+T+ D+++M + ++PGDI+ A+ L L + ++Y
Sbjct: 164 GITFSISQASSDLGETFRGIIRSQDVRSTDRDKVKMLESFKPGDIVRAQVLSLGDGNNYY 223
Query: 145 LSTAENELGVVIALSEAAS 163
L+TA N+LGV+ A +E +
Sbjct: 224 LTTARNDLGVIFAKAENGA 242
>gi|513030233|gb|AGO10258.1| AaceriABL199Wp [Saccharomycetaceae sp. 'Ashbya aceri']
Length = 288
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 33/124 (26%)
Query: 67 VPTPGDVVTARIMAVQQHLCKAHVISV-----------------------GNTALS---- 99
+P GD+V R+ + +++V GNT S
Sbjct: 130 LPKEGDIVLTRVTRITSQRANVEILAVENTNSPIDYGVGSKGSGIVASNGGNTGFSMSQV 189
Query: 100 -----RTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELG 153
TFR ++R ++VRAT D+++M + +RPGDI+ A+ L L + +Y LSTA N+LG
Sbjct: 190 PSDLGETFRGIIRSQDVRATNRDQVKMVEAFRPGDIVRAQVLSLGDGSNYYLSTARNDLG 249
Query: 154 VVIA 157
VV A
Sbjct: 250 VVFA 253
>gi|426201526|gb|EKV51449.1| hypothetical protein AGABI2DRAFT_189708 [Agaricus bisporus var.
bisporus H97]
Length = 181
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 5 PICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKE 64
PI IP QL G GTY R + S++ G + +SV V +
Sbjct: 9 PIPIPRGPALQL------GSGTYSRDNEVRSSILGVPQF-----EGSTLSVPRVRPHP-- 55
Query: 65 VIVPTPGDVVTARI--MAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
P+P VV + ++ Q + V+ F ++R ++VRATE DR+++
Sbjct: 56 ---PSPNSVVLGTVTRLSPLQAMISISVVDGVPLPAGEEFTGVIRAQDVRATEKDRVKIG 112
Query: 123 KCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
C+R GD++ + L + SY +STA N+LGV+ A SEA +
Sbjct: 113 DCFRGGDVVRGLVISLGDARSYFVSTARNDLGVIFATSEAGA 154
>gi|365988228|ref|XP_003670945.1| hypothetical protein NDAI_0F03840 [Naumovozyma dairenensis CBS 421]
gi|343769716|emb|CCD25702.1| hypothetical protein NDAI_0F03840 [Naumovozyma dairenensis CBS 421]
Length = 301
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVI 156
L TFR L+R ++VRATE DR+++ ++PGDI+ A+ L L + +Y L+TA N+LGVV
Sbjct: 206 LGETFRGLIRSQDVRATERDRVKIIDSFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVF 265
Query: 157 A 157
A
Sbjct: 266 A 266
>gi|401624003|gb|EJS42080.1| csl4p [Saccharomyces arboricola H-6]
Length = 292
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 91 ISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAE 149
+S ++ L +FR ++R ++VR+T+ DR+++ C++PGDI+ A+ L L + +Y L+TA
Sbjct: 190 VSQASSDLGESFRGIIRSQDVRSTDRDRVKVIDCFKPGDIVRAQVLSLGDGTNYYLTTAR 249
Query: 150 NELGVVIA 157
N+LGVV A
Sbjct: 250 NDLGVVFA 257
>gi|482810515|gb|EOA87321.1| hypothetical protein SETTUDRAFT_163283 [Setosphaeria turcica Et28A]
Length = 210
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 24/182 (13%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGT-------------------- 40
M+ P I +PGQ + +D G GT++ + +Y+++AG
Sbjct: 1 MALPSIALPGQLLGSIDK-YSPGPGTHIYESQIYASIAGPVVSSPSSSQAAPASKSKLAP 59
Query: 41 -VSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALS 99
VSI + + + ++ +S ++PT V RI + ++ V
Sbjct: 60 LVSITRP-PASSDPGIVGPNSGGGVPLLPTVTSTVLVRITRLGPRFASCEILVVDGAVCR 118
Query: 100 RTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIAL 158
F A +RRE++RATE D+I + + +R GD++ + L + +Y ++T NELGVV+A
Sbjct: 119 EAFVAQIRREDIRATEKDKIRIEESFRVGDLVRGTVISLGDSGNYYVATDRNELGVVLAR 178
Query: 159 SE 160
SE
Sbjct: 179 SE 180
>gi|297819770|ref|XP_002877768.1| hypothetical protein ARALYDRAFT_485422 [Arabidopsis lyrata subsp.
lyrata]
gi|297323606|gb|EFH54027.1| hypothetical protein ARALYDRAFT_485422 [Arabidopsis lyrata subsp.
lyrata]
Length = 203
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 23 GRGTYVRQGYLYSTLAGTVSINKHV-EDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAV 81
G+G YV +Y +L GT I + E + +++EV+ +K +P G VV AR+ V
Sbjct: 9 GKGAYVNVITIYGSLTGTRRIVSPLPESLDQRAIVEVTGHKAHGPIPETGSVVIARVTKV 68
Query: 82 QQHLCKAHVISVGNTA----LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILARLPL 137
+ ++ +G A L F + R + ATEID+++M++ + GDI L L
Sbjct: 69 MARMAAVDILCIGPKAVFADLISLFIFMCRSK--LATEIDKVDMHQSFNAGDI----LSL 122
Query: 138 KELHSYQLSTAENELGVVIA 157
+ + LST +N+LGVV A
Sbjct: 123 GDAQADYLSTVKNDLGVVSA 142
>gi|146420783|ref|XP_001486345.1| hypothetical protein PGUG_02016 [Meyerozyma guilliermondii ATCC
6260]
Length = 267
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 76 ARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILARL 135
A + + Q L KA +G T F+ ++R ++VR T+ DR+++ C+RPGDI+ +
Sbjct: 152 AAVASFQSTLGKAVAADLGET-----FKGIIRTQDVRLTDRDRVQIVDCFRPGDIVRGMI 206
Query: 136 -PLKELHSYQLSTAENELGVVIALSEAAS 163
L + +Y L+TA N+LGVV A E +
Sbjct: 207 SSLGDGSNYYLTTARNDLGVVFARGEGGA 235
>gi|145348477|ref|XP_001418674.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578904|gb|ABO96967.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 127
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISV-GNTALSRTFRALLRRENVRATEIDRIEMYKC 124
+VP GDVV R+ V + + +V G F ++RR++ RA +D +E+ +C
Sbjct: 1 VVPRGGDVVFGRVTRVLEKAAHVEIAAVNGRAPRGGDFAGVVRRQDARAHAVDSVELERC 60
Query: 125 YRPGDIILAR-LPLKELHSYQLSTAENELGVVIA 157
+R GD++ A+ L L + S+ L+TA ++LGVV A
Sbjct: 61 FRAGDVVRAKVLSLGDARSFYLTTAGDDLGVVRA 94
>gi|260950951|ref|XP_002619772.1| hypothetical protein CLUG_00931 [Clavispora lusitaniae ATCC 42720]
gi|238847344|gb|EEQ36808.1| hypothetical protein CLUG_00931 [Clavispora lusitaniae ATCC 42720]
Length = 295
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 76 ARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR- 134
A + + Q + A VG FR ++R ++VR T+ D++ + C+RPGDI+ A
Sbjct: 185 AAVASAQGTMIGAQPYDVG-----EAFRGVIRSQDVRQTDRDKVRIADCFRPGDIVRAEV 239
Query: 135 LPLKELHSYQLSTAENELGVVIALSEAAS 163
L L + +Y L+TA N+LGVV A SE +
Sbjct: 240 LSLGDGSNYYLTTARNDLGVVFAKSEGGA 268
>gi|241948613|ref|XP_002417029.1| 3'-5' exoribonuclease, exosome subunit, putative [Candida
dubliniensis CD36]
gi|223640367|emb|CAX44617.1| 3'-5' exoribonuclease, exosome subunit, putative [Candida
dubliniensis CD36]
Length = 322
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVI 156
L F+ ++R ++R+TE D++++ C++PGDI+ A+ + L + +Y LSTA+NELGVV
Sbjct: 225 LGENFKGIIRINDIRSTERDKLKIIDCFKPGDIVKAQVISLGDGSNYYLSTAKNELGVVF 284
Query: 157 ALSEAAS 163
A SE +
Sbjct: 285 AKSENGA 291
>gi|45185031|ref|NP_982748.1| ABL199Wp [Ashbya gossypii ATCC 10895]
gi|44980667|gb|AAS50572.1| ABL199Wp [Ashbya gossypii ATCC 10895]
gi|374105950|gb|AEY94860.1| FABL199Wp [Ashbya gossypii FDAG1]
Length = 288
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVI 156
L TFR ++R ++VRAT D+++M + +RPGDI+ A+ L L + +Y L+TA N+LGVV
Sbjct: 193 LGETFRGIIRSQDVRATNRDQVKMVEAFRPGDIVRAQVLSLGDGSNYYLTTARNDLGVVF 252
Query: 157 A 157
A
Sbjct: 253 A 253
>gi|302698473|ref|XP_003038915.1| hypothetical protein SCHCODRAFT_13800 [Schizophyllum commune H4-8]
gi|300112612|gb|EFJ04013.1| hypothetical protein SCHCODRAFT_13800 [Schizophyllum commune H4-8]
Length = 185
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 19/162 (11%)
Query: 5 PICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKE 64
P+ +P + QL G G Y R + ++L G + +H D ++++ + +
Sbjct: 10 PLVLPRGPVPQL------GTGVYARGSDVRASLIG---VPRH--DGPKITISRIRPHP-- 56
Query: 65 VIVPTPGDVVTARIMAVQ--QHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
P+P VV ++ + Q + V+ F ++R ++VRATE D++++
Sbjct: 57 ---PSPNTVVLGSVIRLTPLQAIIAISVVDGVPLPPGEEFTGVIRTQDVRATEKDKVKIG 113
Query: 123 KCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSEAAS 163
C+R GD++ + L + SY ++TA N+LGVV A SEA +
Sbjct: 114 DCFRGGDVVRGVVISLGDARSYFITTARNDLGVVFATSEAGA 155
>gi|392574228|gb|EIW67365.1| hypothetical protein TREMEDRAFT_45342 [Tremella mesenterica DSM
1558]
Length = 190
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 23 GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQ 82
G G Y G + + + I + D +SV+ K++ VP +V + V
Sbjct: 26 GPGCYQHNGRILANI-----IGRPRRDGAMISVVG----KQDAAVPDVDAIVIGTVSRVT 76
Query: 83 QHLCKAHVISVGNTALSRT---FRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLK 138
++ V N + T F ++R ++R TE D+I M +C+R GD++ A+ L L
Sbjct: 77 PQQAIINIDVVDNRPVPETSEAFTGVVRLADIRLTERDKIRMGECFRLGDVVKAKVLSLG 136
Query: 139 ELHSYQLSTAENELGVVIALSEAAS 163
+ SY LSTA NELGVV A SE+ +
Sbjct: 137 DARSYYLSTAANELGVVYATSESGN 161
>gi|169844195|ref|XP_001828819.1| exoribonuclease [Coprinopsis cinerea okayama7#130]
gi|116510190|gb|EAU93085.1| exoribonuclease [Coprinopsis cinerea okayama7#130]
Length = 206
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+ +PGQ+I G GTY R + ++L G + +++ +V +
Sbjct: 10 VLLPGQQISVRAPAPQLGTGTYSRDAQIRASLLGAPKLQ-----GSTLTIPQVRPHP--- 61
Query: 66 IVPTPGDVV---TARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
P P VV R+ +Q L V + A F ++R ++VRATE DR+++
Sbjct: 62 --PAPNSVVLGSVTRLSPLQAFLSITVVDGIPLPA-GEEFTGVIRSQDVRATEKDRVKIG 118
Query: 123 KCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSEAA 162
C+R GD++ + L + SY ++TA N+LGV+ A SEA
Sbjct: 119 DCFRGGDVVRGVVISLGDARSYFITTARNDLGVIYATSEAG 159
>gi|378726737|gb|EHY53196.1| exosome complex subunit Csl4 [Exophiala dermatitidis NIH/UT8656]
Length = 245
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 13/133 (9%)
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGN-----TALSRT------FRALLRRENVRAT 114
++P G V RI VQQ A ++ V T+ +R F+A+LRRE++R
Sbjct: 109 LLPKVGSTVLVRITRVQQRQISASILVVDPSPNDITSYTRVTDDDLQFQAVLRREDIRTH 168
Query: 115 EIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA-SLFRSSEKLT 172
E D+I M YR GDI+ A + L + +Y +STA NE GVV+A S+A ++ +S +
Sbjct: 169 EKDKIVMNDMYRVGDIVRAMVISLGDERNYYISTAGNEFGVVVATSDAGNAMVPASWREM 228
Query: 173 NDIEFLKQEKLKL 185
D+ + E K+
Sbjct: 229 RDVVTGQAESRKV 241
>gi|397617763|gb|EJK64592.1| hypothetical protein THAOC_14660 [Thalassiosira oceanica]
Length = 233
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 23/167 (13%)
Query: 20 IVGGRGTYVRQGYLYSTLAGTVSINKHVE---DNKEVS-VIEVSSYKKEVIV-------P 68
++ G G Y+RQG LY++ GT+ ++H + D VS ++ V+S + ++ P
Sbjct: 36 LLAGGGCYLRQGQLYASQLGTLGAHRHGDSTTDEGVVSWIVNVNSERGAGLMAMAVSAGP 95
Query: 69 TPGDVVTARIMAVQQ--HLCKAHVISV-----GNT-----ALSRTFRALLRRENVRATEI 116
G VV R+ V + H V V G+T F LR+ +R
Sbjct: 96 QIGMVVIGRVTRVNRPSHALVDMVAIVPEAKDGSTDQAIVPFPEPFSGTLRQNEIRPKSS 155
Query: 117 DRIEMYKCYRPGDIILARLPLKELHSYQLSTAENELGVVIALSEAAS 163
+E+ +C RPGD+ILAR+ + L+TAE ELGV+ A+ E++
Sbjct: 156 LEVEIAECIRPGDVILARVHANGERDFILTTAEAELGVIQAICESSG 202
>gi|50307887|ref|XP_453937.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643071|emb|CAH01033.1| KLLA0D19701p [Kluyveromyces lactis]
Length = 297
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVI 156
L TFR ++R ++VRAT+ DR+++ + ++PGDII A+ L L + Y L+TA N+LGVV
Sbjct: 202 LGETFRGIIRSQDVRATDRDRVKVMESFKPGDIIRAQVLSLGDGTHYYLTTARNDLGVVF 261
Query: 157 ALS 159
A S
Sbjct: 262 AKS 264
>gi|402219723|gb|EJT99795.1| hypothetical protein DACRYDRAFT_55085 [Dacryopinax sp. DJM-731 SS1]
Length = 180
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 71 GDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDI 130
G +V +I + +++V N S F ++R +++RATE D++ M C+R GD+
Sbjct: 62 GSLVLGKITHLSPTSATLLILAVDNNP-SEEFTGIIRTQDIRATERDKLRMGDCFRGGDV 120
Query: 131 ILAR-LPLKELHSYQLSTAENELGVVIALSEAASLFR 166
+ A L L + +Y LSTA N+LGVV A SEA + +
Sbjct: 121 VRALVLSLGDQRNYYLSTARNDLGVVFATSEAGGIMQ 157
>gi|395334627|gb|EJF67003.1| hypothetical protein DICSQDRAFT_95987 [Dichomitus squalens LYAD-421
SS1]
Length = 185
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 23 GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARI--MA 80
G G Y R G + ++L G S + S +E+ + P P VV + M+
Sbjct: 23 GSGIYSRDGIVRASLIGVPSYSG--------STLEIKRTRPRP--PAPNSVVLGTVTRMS 72
Query: 81 VQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKE 139
Q + V+ F ++R ++VRATE D++++ C+R GD++ L L +
Sbjct: 73 PLQAVLSITVVDGVPLPAGEEFTGVVRVQDVRATEKDKVKIADCFRGGDVVRGLVLSLGD 132
Query: 140 LHSYQLSTAENELGVVIALSEAAS 163
SY ++TA N+LGV+ A SEA +
Sbjct: 133 ARSYYVTTARNDLGVIFATSEAGA 156
>gi|50543262|ref|XP_499797.1| YALI0A05995p [Yarrowia lipolytica]
gi|49645662|emb|CAG83722.1| YALI0A05995p [Yarrowia lipolytica CLIB122]
Length = 285
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVI 156
L F ++R +VRATE D+++M C++PGDI+ A+ + L + +Y LSTA+NELGV+
Sbjct: 179 LGEGFGGIIRSIDVRATERDKVKMELCFKPGDIVRAQVISLGDGANYYLSTAKNELGVLF 238
Query: 157 ALSEAASLFRSSEKLT 172
A S+ L +++ T
Sbjct: 239 ARSKIGELMYATDWQT 254
>gi|390604784|gb|EIN14175.1| hypothetical protein PUNSTDRAFT_117746 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 186
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 5 PICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKE 64
P+ +P + QL G G Y+R G + ++L G E + S + + + +
Sbjct: 11 PLALPRGPVPQL------GTGIYLRGGQVRASLIG--------EPRYQGSTLAIHTVRPH 56
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRT--FRALLRRENVRATEIDRIEMY 122
P P VV + + + V L F ++R ++VRATE D++++
Sbjct: 57 P--PAPNSVVLGSVTRLSPLQANVAITVVDGVPLPAGEEFTGIIRVQDVRATEKDKVKIA 114
Query: 123 KCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSEAAS 163
C+R GD++ + L + SY ++TA N+LGV+ A SEA +
Sbjct: 115 DCFRGGDVVKGVVISLGDARSYYITTARNDLGVIFATSEAGA 156
>gi|156839158|ref|XP_001643273.1| hypothetical protein Kpol_1015p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156113876|gb|EDO15415.1| hypothetical protein Kpol_1015p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 287
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 91 ISVGNTA--LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLST 147
SV T+ FR +LR ++VRATE DR+++ + ++PGDII A+ L L + +Y L+T
Sbjct: 178 FSVAQTSSDFGEPFRGILRSQDVRATERDRVKLIENFKPGDIIRAQVLSLGDGTNYYLTT 237
Query: 148 AENELGVVIALSEAAS 163
A N+LGVV A S+ +
Sbjct: 238 ARNDLGVVFAKSDNGA 253
>gi|238879148|gb|EEQ42786.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 330
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVI 156
L F+ ++R ++R+TE D++++ C++PGDI+ A+ + L + +Y L+TA+NELGVV
Sbjct: 233 LGENFKGIIRINDIRSTERDKLKLIDCFKPGDIVKAQVISLGDGSNYYLTTAKNELGVVF 292
Query: 157 ALSEAAS 163
A SE +
Sbjct: 293 AKSENGA 299
>gi|403412277|emb|CCL98977.1| predicted protein [Fibroporia radiculosa]
Length = 185
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 19/162 (11%)
Query: 5 PICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKE 64
P+ +P I QL G G Y R ++L G E S + +S + +
Sbjct: 11 PVPLPRGPIPQL------GGGLYSRDNAPRASLVGV--------PRYEGSTLTISRTRPQ 56
Query: 65 VIVPTPGDVVTARI--MAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
P+P +V I ++ QQ + V+ A F ++R ++VRATE D++++
Sbjct: 57 P--PSPNSIVLGSITRLSPQQAVLSIAVVDGVPLAAGEEFVGVVRVQDVRATEKDKVKIA 114
Query: 123 KCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
C+R GD++ + L + SY ++TA N+LGV+ A SEA +
Sbjct: 115 DCFRGGDVVKGLVISLGDARSYYVTTARNDLGVIFATSEAGA 156
>gi|68484729|ref|XP_713676.1| likely exosome component Csl4p [Candida albicans SC5314]
gi|46435185|gb|EAK94572.1| likely exosome component Csl4p [Candida albicans SC5314]
Length = 330
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVI 156
L F+ ++R ++R+TE D++++ C++PGDI+ A+ + L + +Y L+TA+NELGVV
Sbjct: 233 LGENFKGIIRINDIRSTERDKLKLIDCFKPGDIVKAQVISLGDGSNYYLTTAKNELGVVF 292
Query: 157 ALSEAAS 163
A SE +
Sbjct: 293 AKSENGA 299
>gi|451851766|gb|EMD65064.1| hypothetical protein COCSADRAFT_36405 [Bipolaris sorokiniana
ND90Pr]
Length = 211
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 23/182 (12%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTV-SINKHVE----DNKE--- 52
M+ P I +PGQ + +D G GT++ + +Y+++AG V S+ + NK
Sbjct: 1 MALPSIALPGQLLGSIDK-YSPGPGTHIYESQIYASIAGPVVSVGSAPQPTPGSNKTKLP 59
Query: 53 --VSVIEVSSYKKEVIV-----------PTPGDVVTARIMAVQQHLCKAHVISVGNTALS 99
V++ ++ I+ PT V RI + ++ V +
Sbjct: 60 PLVAITRPPTFSDPGILGPNSGGGVPLLPTVSSTVLVRITRLGPRFASCEILVVDDAVCR 119
Query: 100 RTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIAL 158
F A +RRE++RATE D+I++ + +R GD++ + L + +Y ++T NE GVV+A
Sbjct: 120 EAFLAQIRREDIRATEKDKIKIEESFRVGDLVRGTVISLGDSGNYYVATDRNEYGVVLAR 179
Query: 159 SE 160
SE
Sbjct: 180 SE 181
>gi|344304753|gb|EGW34985.1| hypothetical protein SPAPADRAFT_48042 [Spathaspora passalidarum
NRRL Y-27907]
Length = 277
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 12/98 (12%)
Query: 70 PGDVVTARIMAVQQHLCKAHVISVGNTA------LSRTFRALLRRENVRATEIDRIEMYK 123
PG T + QH I+ +T + FR ++R +++R+TE D++++ +
Sbjct: 152 PGSATT-----ITQHAFNQSTIASSSTTAIQVPDIGENFRGVIRSQDIRSTERDKVKVIE 206
Query: 124 CYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
YRPGDI+ A + L + +Y LSTA N+LGVV A SE
Sbjct: 207 SYRPGDIVRAVIISLGDGSNYYLSTARNDLGVVFAKSE 244
>gi|448114434|ref|XP_004202572.1| Piso0_001413 [Millerozyma farinosa CBS 7064]
gi|359383440|emb|CCE79356.1| Piso0_001413 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 90 VISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTA 148
+I+ + L TF+ ++R +++R+TE D++++ + +RPGDI+ A+ + L + +Y LSTA
Sbjct: 191 LINATSADLGETFKGIIRVQDIRSTERDKVKIIESFRPGDIVRAQIISLGDGSNYYLSTA 250
Query: 149 ENELGVVIALSEAAS 163
N+LGV+ A SE +
Sbjct: 251 RNDLGVIYAKSEGGA 265
>gi|255731085|ref|XP_002550467.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132424|gb|EER31982.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 354
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 16/123 (13%)
Query: 57 EVSSYKKEVIVPTPGDVVTARIMAVQ-------QHLCKAHVISVGNTALSR--------T 101
E+ S + + I+P G V I + QHL I+ + LS
Sbjct: 202 EILSLENKPILPDSGVGVNGSISHISIPSTGGSQHLFNLQSIASSQSTLSNFQIYDIGEN 261
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSE 160
F+ ++R ++R+TE D++++ C++PGDI+ A + L + +Y LSTA N+LGVV A SE
Sbjct: 262 FKGIIRINDIRSTERDKLKIIDCFKPGDIVRAIIISLGDGSNYYLSTARNDLGVVFAKSE 321
Query: 161 AAS 163
+
Sbjct: 322 NGA 324
>gi|389751269|gb|EIM92342.1| hypothetical protein STEHIDRAFT_71046 [Stereum hirsutum FP-91666
SS1]
Length = 185
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 23 GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARI--MA 80
G G Y + G +++ G + + S + +S + PTP +V + ++
Sbjct: 23 GSGIYSKDGLARASVVGV--------PHYDASTLTISRVRPHP--PTPSSLVLGSVTRLS 72
Query: 81 VQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKE 139
QQ + V+ F ++R ++VRATE D++++ C+R GD++ + L +
Sbjct: 73 PQQAMVSITVVDGVPLPAGEEFTGVIRTQDVRATEKDKVKIGDCFRGGDVVKGLVISLGD 132
Query: 140 LHSYQLSTAENELGVVIALSEAAS 163
SY ++TA N+LGV+ A SEA
Sbjct: 133 ARSYYITTARNDLGVIFATSEAGG 156
>gi|448111858|ref|XP_004201947.1| Piso0_001413 [Millerozyma farinosa CBS 7064]
gi|359464936|emb|CCE88641.1| Piso0_001413 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 90 VISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTA 148
+I+ + L TF+ ++R +++R+TE D++++ +RPGDI+ A+ + L + +Y LSTA
Sbjct: 191 LINATSADLGETFKGIIRVQDIRSTERDKVKIIDSFRPGDIVRAQIISLGDGSNYYLSTA 250
Query: 149 ENELGVVIALSEAAS 163
N+LGV+ A SE +
Sbjct: 251 RNDLGVIYAKSEGGA 265
>gi|367014001|ref|XP_003681500.1| hypothetical protein TDEL_0E00460 [Torulaspora delbrueckii]
gi|359749161|emb|CCE92289.1| hypothetical protein TDEL_0E00460 [Torulaspora delbrueckii]
Length = 287
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 91 ISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAE 149
I+ ++ L TFR L+R ++VRATE D +++ ++PGDI+ A+ L L + +Y L+TA
Sbjct: 185 IAQASSDLGETFRGLIRSQDVRATERDTVKIIDSFKPGDIVRAQVLSLGDGTNYYLTTAR 244
Query: 150 NELGVVIA 157
N+LGVV A
Sbjct: 245 NDLGVVFA 252
>gi|521730615|gb|EPQ60698.1| hypothetical protein GLOTRDRAFT_68563 [Gloeophyllum trabeum ATCC
11539]
Length = 185
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 6 ICIPGQRICQLDSDIVG--GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKK 63
+ +PGQ I QL G G Y R G + ++L G +E S + +S
Sbjct: 5 LVLPGQPI-QLPRGPAPQLGTGVYSRDGQVRASLLGV--------PRQEGSTLTISRITP 55
Query: 64 EVIVPTPGDVV---TARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE 120
P P +V R+ VQ + V V L F ++R ++VR+TE D+++
Sbjct: 56 RA--PVPNSIVLGSVTRLTPVQAMVAITVVDGV-PLPLGEEFTGVIRAQDVRSTEKDKVK 112
Query: 121 MYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
+ C+R GD++ + L + SY ++TA N+LGV+ A SEA +
Sbjct: 113 IGDCFRGGDVVKGLVISLGDARSYYITTARNDLGVIFATSEAGA 156
>gi|363754907|ref|XP_003647669.1| hypothetical protein Ecym_6482 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891306|gb|AET40852.1| hypothetical protein Ecym_6482 [Eremothecium cymbalariae
DBVPG#7215]
Length = 292
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 91 ISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAE 149
IS ++ L TFR ++R ++VRA++ DR+++ + ++PGDI+ A+ L L + +Y ++TA
Sbjct: 190 ISQASSDLGETFRGVIRAQDVRASDRDRVKITESFKPGDIVRAQVLSLGDGSNYYMTTAR 249
Query: 150 NELGVVIA 157
N+LGVV A
Sbjct: 250 NDLGVVFA 257
>gi|451995427|gb|EMD87895.1| hypothetical protein COCHEDRAFT_1206173 [Bipolaris maydis C5]
gi|477586324|gb|ENI03409.1| hypothetical protein COCC4DRAFT_142969 [Bipolaris maydis ATCC
48331]
Length = 211
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 23/182 (12%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTV-SINKHVE----DNKE--- 52
M+ P I +PGQ + ++ G GT++ + +Y+++AG V S+ + NK
Sbjct: 1 MALPSIALPGQLLGSIEK-YSPGPGTHIYESQIYASIAGPVVSVGSAPQPIAGSNKTKLP 59
Query: 53 --VSVIEVSSYKKEVIV-----------PTPGDVVTARIMAVQQHLCKAHVISVGNTALS 99
V++ S+ I+ PT V RI + ++ V +
Sbjct: 60 PLVAITRPPSFSDPGILGPNSGGGVPLLPTVSSTVLVRITRLGPRFASCEILVVDDAVCR 119
Query: 100 RTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIAL 158
F A +RRE++RATE D+I++ + +R GD++ + L + +Y ++T NE GVV+A
Sbjct: 120 EAFLAQIRREDIRATEKDKIKIEESFRVGDLVRGTVISLGDSGNYYVATDRNEYGVVLAR 179
Query: 159 SE 160
SE
Sbjct: 180 SE 181
>gi|68484820|ref|XP_713631.1| likely exosome component Csl4p [Candida albicans SC5314]
gi|46435138|gb|EAK94526.1| likely exosome component Csl4p [Candida albicans SC5314]
Length = 330
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVI 156
L F+ ++R ++R TE D++++ C++PGDI+ A+ + L + +Y L+TA+NELGVV
Sbjct: 233 LGENFKGIIRINDIRLTERDKLKLIDCFKPGDIVKAQVISLGDGSNYYLTTAKNELGVVF 292
Query: 157 ALSEAAS 163
A SE +
Sbjct: 293 AKSENGA 299
>gi|255711742|ref|XP_002552154.1| KLTH0B08426p [Lachancea thermotolerans]
gi|238933532|emb|CAR21716.1| KLTH0B08426p [Lachancea thermotolerans CBS 6340]
Length = 281
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 91 ISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAE 149
+S ++ L TFR L+ +VRAT+ D++++ +RPGDI+ A+ + L + +Y LSTA
Sbjct: 179 VSQASSDLGETFRGLISSRDVRATDRDKVKIIDSFRPGDIVRAQVISLGDGSNYHLSTAR 238
Query: 150 NELGVVIA 157
N+LGVV A
Sbjct: 239 NDLGVVFA 246
>gi|459368037|gb|EMG46898.1| hypothetical protein G210_2829, partial [Candida maltosa Xu316]
Length = 289
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVI 156
L F+ ++R ++R+TE D+I++ C++PGDI+ A + L + +Y LSTA N+LGVV
Sbjct: 193 LGENFKGIIRINDIRSTERDKIKIIDCFKPGDIVRAVIISLGDGTNYYLSTARNDLGVVF 252
Query: 157 ALSEAAS 163
A SE +
Sbjct: 253 AKSENGA 259
>gi|392869923|gb|EAS28464.2| exosome complex subunit Csl4 [Coccidioides immitis RS]
Length = 341
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 69/224 (30%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDN---KEVSVIE--- 57
P I IPGQR+ S + G GTY+R +Y+++ G + I + V + K+ V+
Sbjct: 7 PSIAIPGQRLAD-SSSYISGPGTYIRDNSIYASIPGPIVIQEPVATDPKSKKTRVVTVSR 65
Query: 58 --------------------VSSYKKEV-----IVPTPGDVVTARIMAVQQH-------- 84
+ S + + +PT G +V R+ VQ+
Sbjct: 66 SSTPSTSTIKSPSQPQGLALLGSSNRRIPLKFNTLPTVGSIVLGRVTRVQRRQATISILL 125
Query: 85 --------------------------LCKAHVISVGNTALSRTFR--ALLRRENVRATEI 116
L A + + ++ + R AL+R+E+VRA E
Sbjct: 126 VLPENQQLNPSADDSEDPSDADLPSILASASISTTSDSLNADELRPQALIRKEDVRAVEK 185
Query: 117 DRIEMYKCYRPGDIILARL-PLKELHSYQLSTAENELGVVIALS 159
DR+ M + +R GDI+ A + + + +Y STA NELGVV+A S
Sbjct: 186 DRVVMEESFRVGDIVRAVIVSVGDQVAYYASTAGNELGVVMARS 229
>gi|269856952|gb|ACZ51501.1| CND01650-like protein [Kwoniella heveanensis]
Length = 191
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 25/174 (14%)
Query: 1 MSNPPICIPGQRICQLDSDIVG------GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVS 54
MS+ + +PGQ L +++V G G Y G + +++ I + D VS
Sbjct: 1 MSSSALLLPGQ---PLPAELVTPPLPQCGSGCYQLNGRILASV-----IGRPRRDGAVVS 52
Query: 55 VI--EVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRT---FRALLRRE 109
VI E S +V G +V + + + + + L T F ++R
Sbjct: 53 VIGREESGNTPDV-----GSIVIGTVSRLTPQQAHVTLTTSNDRPLPETSEEFVGVIRVG 107
Query: 110 NVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAA 162
+VR TE D+++M +C+R GD++ A+ L L + SY LSTA NELGVV A SEA
Sbjct: 108 DVRLTERDKVKMGECFRLGDLVKAKVLSLGDARSYYLSTAANELGVVYAKSEAG 161
>gi|119174805|ref|XP_001239731.1| hypothetical protein CIMG_09352 [Coccidioides immitis RS]
Length = 271
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 69/224 (30%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDN---KEVSVIE--- 57
P I IPGQR+ S + G GTY+R +Y+++ G + I + V + K+ V+
Sbjct: 7 PSIAIPGQRLAD-SSSYISGPGTYIRDNSIYASIPGPIVIQEPVATDPKSKKTRVVTVSR 65
Query: 58 --------------------VSSYKKEV-----IVPTPGDVVTARIMAVQQH-------- 84
+ S + + +PT G +V R+ VQ+
Sbjct: 66 SSTPSTSTIKSPSQPQGLALLGSSNRRIPLKFNTLPTVGSIVLGRVTRVQRRQATISILL 125
Query: 85 --------------------------LCKAHVISVGNTALSRTFR--ALLRRENVRATEI 116
L A + + ++ + R AL+R+E+VRA E
Sbjct: 126 VLPENQQLNPSADDSEDPSDADLPSILASASISTTSDSLNADELRPQALIRKEDVRAVEK 185
Query: 117 DRIEMYKCYRPGDIILARL-PLKELHSYQLSTAENELGVVIALS 159
DR+ M + +R GDI+ A + + + +Y STA NELGVV+A S
Sbjct: 186 DRVVMEESFRVGDIVRAVIVSVGDQVAYYASTAGNELGVVMARS 229
>gi|452985490|gb|EME85247.1| hypothetical protein MYCFIDRAFT_46706 [Pseudocercospora fijiensis
CIRAD86]
Length = 197
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 13/166 (7%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
I +PGQ + S+ +G T++ + L +++AG + + + + +
Sbjct: 4 IALPGQSLGPNTSNNLG-EATHIHKNNLCASIAGPIHSKPSTSKTSKAPTLSIHRTTGPL 62
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHV----------ISVGNTALSRTFRALLRRENVRATE 115
+ P+ G + RI Q + + + L+ A +R++++RATE
Sbjct: 63 L-PSVGTKILGRITKTQTRQANISILTIISSSPDETTTTHHNLNDPLPATIRQQDIRATE 121
Query: 116 IDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSE 160
ID++++ + +R GDI+ A + L + +Y LSTA+NELGVV+A SE
Sbjct: 122 IDQVKVSESFRVGDIVRAVVISLGDERAYYLSTAKNELGVVMATSE 167
>gi|367008074|ref|XP_003688766.1| hypothetical protein TPHA_0P01750 [Tetrapisispora phaffii CBS 4417]
gi|357527076|emb|CCE66332.1| hypothetical protein TPHA_0P01750 [Tetrapisispora phaffii CBS 4417]
Length = 284
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 91 ISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAE 149
+S ++ FR LR ++VRATE D +++ +C++PGDI+ A+ L L + +Y L+TA+
Sbjct: 182 VSQTSSDFGDPFRGTLRSQDVRATERDSVKIIECFKPGDIVRAQILSLGDGVNYYLTTAK 241
Query: 150 NELGVVIALS 159
++LGVV A S
Sbjct: 242 DDLGVVFAKS 251
>gi|465792999|emb|CCU98118.1| unnamed protein product [Malassezia sympodialis ATCC 42132]
Length = 214
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 70/157 (44%), Gaps = 34/157 (21%)
Query: 23 GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTAR----- 77
G GTY Y+ ++ G + V + +++P P VV R
Sbjct: 25 GDGTYAYGDYVMASRIG------------PPGTVRVQGTRPPLVLPRPESVVLGRVTRVT 72
Query: 78 -------IMAVQQHLCK-AHVISVG---NTALSRT-----FRALLRRENVRATEIDRIEM 121
I+ V C A SVG N A F+ L+R ++VR T+ D + +
Sbjct: 73 PRQATISILVVDGQPCGGAQAASVGARTNHAAGEGIDGSEFQGLVRAQDVRTTDKDNVVL 132
Query: 122 YKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIA 157
+C+RPGDI+ A L L + SY LSTA N+LGVV A
Sbjct: 133 SECFRPGDIVRAVVLSLGDARSYYLSTARNDLGVVHA 169
>gi|254573788|ref|XP_002494003.1| Subunit of the exosome, which is an essential complex present in
both nucleus and cytoplasm [Komagataella pastoris GS115]
gi|238033802|emb|CAY71824.1| Subunit of the exosome, which is an essential complex present in
both nucleus and cytoplasm [Komagataella pastoris GS115]
gi|328354179|emb|CCA40576.1| exosome complex component CSL4 [Komagataella pastoris CBS 7435]
Length = 301
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVI 156
+ TF+ ++R ++V++T D++++ KC+RPGD++ A + L + +Y +STA N+LGV++
Sbjct: 205 IGETFKGIIRSQDVQSTNRDKVQINKCFRPGDVLRAIVISLGDGSNYYMSTARNDLGVIL 264
Query: 157 ALSEAAS 163
A S +
Sbjct: 265 AKSNGGA 271
>gi|84999398|ref|XP_954420.1| 3'-5' exoribonuclease (CSL4 ) [Theileria annulata]
gi|65305418|emb|CAI73743.1| 3'-5' exoribonuclease (CSL4 homologue), putative [Theileria
annulata]
Length = 180
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 11/151 (7%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+ +PG I + D V YVR +YS + G +S + +NK VSV+ V
Sbjct: 5 MVLPGMMIGTTN-DYVPLNNVYVRDSVIYSAVLGNLSFS----ENKGVSVVS-----NHV 54
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+P G V A+I V + ++ISV L F+ L NV ++ I MY+ +
Sbjct: 55 KIPYVGATVIAQITRVHINKADCNIISVDGRVLKDFFKGSLTNNNVLESKNIEILMYEWF 114
Query: 126 RPGDIILARLPLK-ELHSYQLSTAENELGVV 155
RPGD I ++ + + LSTA LGV+
Sbjct: 115 RPGDFIKCKVIYAGDGKQFTLSTAGLGLGVI 145
>gi|470317486|gb|EMR09198.1| hypothetical protein PNEG_02535 [Pneumocystis murina B123]
Length = 197
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEV---SSYK 62
+ +PGQ I ++ I G GT + + +++ G V + ++ ++SV + S K
Sbjct: 10 LVLPGQPISSTNATI-AGPGTIIYNSVIRASIPGKVVQSLNLNGQCQISVERLLCRFSGK 68
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
I+P V R++ ++ + V R F+ ++R +++ + +++Y
Sbjct: 69 GSPILPEVNAFVLGRVIKIKPKEAIVSIFVVNEVVCQREFQGIIRIQDIETINKNTVKVY 128
Query: 123 KCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIA 157
+R GDI+ A+ + L + +SY LSTA+N+LGVV A
Sbjct: 129 TSFRLGDIVRAQVISLGDQYSYYLSTAKNDLGVVFA 164
>gi|219122148|ref|XP_002181414.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407400|gb|EEC47337.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 248
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 87/186 (46%), Gaps = 36/186 (19%)
Query: 8 IPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHV-------------------- 47
+PG R+ + I G GTYVR G++Y++ GT+S++
Sbjct: 30 VPGDRLGTI-RQIQPGPGTYVRAGHVYASTTGTLSVSSSEAAVAATATATSSAKPTTTTT 88
Query: 48 -----EDNKEVSVIEVSSYKKEV--IVPTPGDVVTARIM------AVQQHLCKAHVISVG 94
ED ++++ S + V T G VV AR++ AV + L V +
Sbjct: 89 TTSAPEDALVWAIVQARSSQGPASTTVLTVGRVVLARVVRITRQQAVLEILAADGVTTAT 148
Query: 95 NTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELG 153
T L R A + RE+VR + I M + PGD++LAR L L + Y L+TAE ELG
Sbjct: 149 ATLLHRPEGA-IHREDVRDGPSEPIRMQDSFLPGDLVLARVLSLGDSRRYYLTTAEPELG 207
Query: 154 VVIALS 159
V+ ALS
Sbjct: 208 VLHALS 213
>gi|392597282|gb|EIW86604.1| exoribonuclease [Coniophora puteana RWD-64-598 SS2]
Length = 187
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
I +PGQ + G G Y+ +G + +++ G + +S+ + +
Sbjct: 5 ILLPGQPVFLRGPAPSLGGGLYLSEGQVRASVVGVPR-----QQGSTISIPRIRPHP--- 56
Query: 66 IVPTPGDVVTARI--MAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYK 123
PT VV + + Q + V+ F ++R ++VRATE D++++
Sbjct: 57 --PTTNSVVLGTVTRLTPIQAMVSISVVDDVPLPTGEEFIGVIRNQDVRATEKDKVKIGD 114
Query: 124 CYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS 163
C+R GD++ + L + SY ++TA N+LGVV A SEA +
Sbjct: 115 CFRGGDVVKGSVISLGDARSYYITTARNDLGVVFATSEAGA 155
>gi|473886950|gb|EMS48194.1| hypothetical protein TRIUR3_30029 [Triticum urartu]
Length = 182
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 38/152 (25%)
Query: 54 SVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALL------- 106
S +EV +K VP PG +V AR+ V + A ++ V + A+ F ++
Sbjct: 46 STVEVVGHKAHGAVPQPGSIVIARVTKVMARMASADIMCVDSKAVKEKFTGMIRQCIAGK 105
Query: 107 ---------RRENVRATEIDRIEMYKCYRPGDIILARLPLKELHSYQLSTAENELGVVIA 157
R+++VRATEID +L L + +Y LSTA+NELGVV A
Sbjct: 106 FLMPCSYVCRQQDVRATEID----------------KLSLGDARAYYLSTAKNELGVVSA 149
Query: 158 LSEAASLFRSSE------KLTNDIEFLKQEKL 183
S A + +LT IE K K+
Sbjct: 150 QSIAGGTLVPTSWTEMQCELTGQIEQRKVAKV 181
>gi|126137948|ref|XP_001385497.1| exosome 3'->5 exonuclease subunit ski4 (Csl4) [Scheffersomyces
stipitis CBS 6054]
gi|126092775|gb|ABN67468.1| exosome 3'->5 exonuclease subunit ski4 (Csl4) [Scheffersomyces
stipitis CBS 6054]
Length = 294
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVI 156
+ F+ ++R +++R+T+ D++++ Y+PGDI+ A + L + +Y LSTA N+LGV+
Sbjct: 198 IGENFKGIIRSQDIRSTDRDKVKVIDSYKPGDIVRALIISLGDGSNYYLSTARNDLGVIF 257
Query: 157 ALSEAAS 163
A SE S
Sbjct: 258 AKSENGS 264
>gi|406602728|emb|CCH45686.1| Exosome complex component CSL4 [Wickerhamomyces ciferrii]
Length = 289
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 54/91 (59%), Gaps = 11/91 (12%)
Query: 70 PGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGD 129
PG A ++ Q ++ L TF+ ++R ++VR+T+ D++++ + ++PGD
Sbjct: 176 PGGGSGAATFSIHQ----------ASSDLGETFKGIIRSQDVRSTDRDKVKIIESFKPGD 225
Query: 130 IILAR-LPLKELHSYQLSTAENELGVVIALS 159
II A+ L L + +Y L+T+ N+LGVV A S
Sbjct: 226 IIRAQILSLGDGTNYYLTTSRNDLGVVYAKS 256
>gi|14589998|ref|NP_142062.1| exosome complex RNA-binding protein Csl4 [Pyrococcus horikoshii
OT3]
gi|499186620|ref|WP_010884160.1| RNA-binding protein [Pyrococcus horikoshii]
gi|3256428|dbj|BAA29111.1| 200aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 200
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 23 GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQ 82
G G G LYST AG V INK D E+S+ S VP GD+V AR++ V+
Sbjct: 32 GDGVIAEDGNLYSTRAGWVRINK---DKIEISLEPASKVPP---VPKKGDIVYARVLEVK 85
Query: 83 QHLCKAHVISV----GNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILARLPLK 138
Q +I + GN ++ + A + V+ ++ ++ ++ GDI+ AR+
Sbjct: 86 QQAVLLKMIKIEGQEGNREIATSKLAGIHISQVKDGFVE--DLRNEFKVGDIVRARVIAD 143
Query: 139 ELHSYQLSTAENELGVVIAL 158
E QL+T + +LGVV AL
Sbjct: 144 EKSPIQLTTKDPDLGVVYAL 163
>gi|514698688|ref|XP_004996913.1| hypothetical protein PTSG_02420 [Salpingoeca sp. ATCC 50818]
gi|326436139|gb|EGD81709.1| hypothetical protein PTSG_02420 [Salpingoeca sp. ATCC 50818]
Length = 178
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVI-- 66
PG R+ S V G GTY+R GY+Y++L G K ED+K+ + +S ++ I
Sbjct: 20 PGTRLAP-QSTHVAGEGTYLRDGYIYASLVGQRVETKKPEDSKDTKPV-ISIHRPGQIAS 77
Query: 67 -VPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLR 107
VPT G VVT +++++ K ++ VG L ++F ++R
Sbjct: 78 LVPTVGTVVTCKVISMNPRFAKTKILCVGAVPLQQSFSGIIR 119
>gi|242761963|ref|XP_002340283.1| exosome complex subunit Csl4, putative [Talaromyces stipitatus ATCC
10500]
gi|218723479|gb|EED22896.1| exosome complex subunit Csl4, putative [Talaromyces stipitatus ATCC
10500]
Length = 259
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 62/230 (26%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVS----------- 54
+ +PGQ++ + S + G GT+V+ G + +++ G V + + + +V+
Sbjct: 16 LAVPGQQLA-MTSTYLPGTGTHVQNGIICASIPGPVFVEQLSQTKSKVTKSILSVLRSGI 74
Query: 55 --------VIEVSSY------------KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVG 94
V +VS++ K +P +V AR+ VQ+ ++ V
Sbjct: 75 GNIGPDGTVQKVSAHTTTTTTATGTKRPKYNTLPAVDSIVLARVTRVQKRQVTLSILVVL 134
Query: 95 NTALSRT----------------------------FRALLRRENVRATEIDRIEMYKCYR 126
+ + T F+AL+R+E+VRA E DR+ + + +R
Sbjct: 135 DDITAATQVSDNDNIAAILTSAANPENQSTSDELRFQALIRKEDVRAVEKDRVVLEEMFR 194
Query: 127 PGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAAS-LFRSSEKLTND 174
GDI+ + L + Y L+TA N+LGVV+A SEA + +F S K D
Sbjct: 195 VGDIVRGSVISLGDQSFYYLTTARNDLGVVMARSEAGNMMFPVSWKEMKD 244
>gi|18976424|ref|NP_577781.1| exosome complex RNA-binding protein Csl4 [Pyrococcus furiosus DSM
3638]
gi|397652232|ref|YP_006492813.1| exosome complex RNA-binding protein Csl4 [Pyrococcus furiosus COM1]
gi|499320672|ref|WP_011011164.1| RNA-binding protein [Pyrococcus furiosus]
gi|18891956|gb|AAL80176.1| hypothetical protein PF0052 [Pyrococcus furiosus DSM 3638]
gi|393189823|gb|AFN04521.1| exosome complex RNA-binding protein Csl4 [Pyrococcus furiosus COM1]
Length = 197
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 23 GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQ 82
G G V G LYST AG V INK D E+S+ SS +P GD+V AR++ ++
Sbjct: 30 GEGVIVEDGNLYSTRAGWVRINK---DKVEISLEPASSTPP---IPKVGDIVYARVIDIK 83
Query: 83 QHLCKAHVISV---GNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILARLPLKE 139
Q +I + G+ ++ + A + V+ ++ ++ +R GDI+ AR+ E
Sbjct: 84 QQAVLLKMIKIEGKGDREIAMSKLAGIHISQVKDGFVE--DLRNEFRIGDIVRARVITDE 141
Query: 140 LHSYQLSTAENELGVVIAL 158
QL+T + +LGVV A
Sbjct: 142 KSPIQLTTKDPDLGVVYAF 160
>gi|344231151|gb|EGV63033.1| hypothetical protein CANTEDRAFT_93806 [Candida tenuis ATCC 10573]
Length = 273
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 80 AVQQHLCKAHVISVGNTA----LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR- 134
A+ H A ++ G A L +F+ ++R ++VR+T+ D++++ + ++PGDI+ A
Sbjct: 155 ALNNHSTIASSLTAGINAMAGELGESFKGVIRSQDVRSTDRDKVKIIESFKPGDIVRALI 214
Query: 135 LPLKELHSYQLSTAENELGVVIALSE 160
+ L + +Y LSTA N+LGV+ A SE
Sbjct: 215 ISLGDGSNYYLSTARNDLGVIYAKSE 240
>gi|412986845|emb|CCO15271.1| predicted protein [Bathycoccus prasinos]
Length = 243
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
V +P DVV A+ +++ + + V+ L F ++R+++VR TEID++ M +
Sbjct: 111 VRLPEVNDVVFAKCTKIREKMAQFDVLVCDGKPLKTEFSGIVRQQDVRKTEIDKVIMEES 170
Query: 125 YRPGDIILAR-LPLKELHSYQLSTAENELGVVIA 157
+ PGD++ + L + E S L+T EN LGVV A
Sbjct: 171 FVPGDVVRCKVLAMGEGRSLVLATNENPLGVVRA 204
>gi|170085259|ref|XP_001873853.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651405|gb|EDR15645.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSE 160
F ++R ++VRATE D++++ C+R GD++ + L + SY ++TA N+LGV+ A SE
Sbjct: 93 FTGVIRTQDVRATEKDKVKIGDCFRGGDVVRGVVISLGDTRSYFVTTARNDLGVIFATSE 152
Query: 161 AAS 163
A +
Sbjct: 153 AGA 155
>gi|303314533|ref|XP_003067275.1| hypothetical protein CPC735_017320 [Coccidioides posadasii C735
delta SOWgp]
gi|240106943|gb|EER25130.1| hypothetical protein CPC735_017320 [Coccidioides posadasii C735
delta SOWgp]
gi|320037581|gb|EFW19518.1| exosome subunit Csl4 [Coccidioides posadasii str. Silveira]
Length = 263
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 92/224 (41%), Gaps = 69/224 (30%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDN---KEVSVIE--- 57
P I IPGQ + S + G GTY+R +Y+++ G + I + + K+ V+
Sbjct: 7 PSIAIPGQHLAD-SSSYISGPGTYIRDNSIYASIPGPIVIREPAATDPKSKKTRVVTVSR 65
Query: 58 --------------------VSSYKKEV-----IVPTPGDVVTARIMAVQQH-------- 84
+ S + + +PT G +V R+ VQ+
Sbjct: 66 SSTPSTSTIKSPSQPQGLALLGSSNRRIPLKFNTLPTVGSIVLGRVTRVQRRQATISILL 125
Query: 85 --------------------------LCKAHVISVGNTALSRTFR--ALLRRENVRATEI 116
L A + + ++ + R AL+R+E+VRA E
Sbjct: 126 VLPESQQLNPSADDSEDPSDADLPSILASASISTTSDSLNADELRPQALIRKEDVRAVEK 185
Query: 117 DRIEMYKCYRPGDIILARL-PLKELHSYQLSTAENELGVVIALS 159
DR+ M + +R GDI+ A + + + +Y STA NELGVV+A S
Sbjct: 186 DRVVMEESFRVGDIVRAVIVSVGDQVAYYASTAGNELGVVMARS 229
>gi|508721900|gb|EOY13797.1| Nucleic acid-binding, OB-fold-like protein [Theobroma cacao]
Length = 104
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 97 ALSRTFRALLRRENVRATEIDRIEMYKCYRPGDII-LARLPLKELHSYQLSTAENELGVV 155
+L F ++ +E VRAT+ID+++M+ +RP DI+ + L L + +Y LSTA+NE+GV+
Sbjct: 8 SLREKFSGIIGQEGVRATDIDKVDMHLSFRPSDIVRVVVLSLGDARAYYLSTAKNEVGVI 67
Query: 156 IALSEA 161
S A
Sbjct: 68 SGKSSA 73
>gi|409051718|gb|EKM61194.1| hypothetical protein PHACADRAFT_156409 [Phanerochaete carnosa
HHB-10118-sp]
Length = 168
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
F ++R ++VRATE D++++ C+R GD++ + L + SY ++TA N+LGV+ A SE
Sbjct: 77 FTGVIRVQDVRATEKDKVKIADCFRGGDVVKGLVISLGDARSYYVTTARNDLGVIFATSE 136
Query: 161 AAS 163
A +
Sbjct: 137 AGA 139
>gi|354543752|emb|CCE40474.1| hypothetical protein CPAR2_105100 [Candida parapsilosis]
Length = 321
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVI 156
L +R ++R ++R+TE D+I + +C++PGD++ + L + +Y STA N+LGVV+
Sbjct: 224 LGENYRGIIRASDIRSTERDKIVVGQCFKPGDVVRCMIISLGDGQNYYCSTARNDLGVVL 283
Query: 157 ALS 159
A S
Sbjct: 284 AKS 286
>gi|212529884|ref|XP_002145099.1| exosome complex subunit Csl4, putative [Talaromyces marneffei ATCC
18224]
gi|210074497|gb|EEA28584.1| exosome complex subunit Csl4, putative [Talaromyces marneffei ATCC
18224]
Length = 247
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
F+AL+R+E+VRA E DR+ + + +R GD++ + L + Y L+TA N+LGVV+A S+
Sbjct: 158 FQALIRKEDVRAVEKDRVVLEEMFRVGDVVRGSIISLGDQSFYYLTTARNDLGVVMARSD 217
Query: 161 AAS-LFRSSEKLTND 174
A + +F S K D
Sbjct: 218 AGNMMFPVSWKEMKD 232
>gi|14520270|ref|NP_125745.1| exosome complex RNA-binding protein Csl4 [Pyrococcus abyssi GE5]
gi|499168901|ref|WP_010867177.1| RNA-binding protein [Pyrococcus abyssi]
gi|5457485|emb|CAB48976.1| RNA-binding protein, putative, containing S1 RNA binding domain
[Pyrococcus abyssi GE5]
gi|380740791|tpe|CCE69425.1| TPA: exosome complex RNA-binding protein Csl4 [Pyrococcus abyssi
GE5]
Length = 199
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
+ N +PG + ++ + + G G V G LYS AG V INK D E+S+ SS
Sbjct: 11 IKNGDFVLPGDYLGVIE-EYLPGEGVIVEDGNLYSARAGWVKINK---DKVEISLEPASS 66
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVG---NTALSRTFRALLRRENVRATEID 117
+P GD+V AR++ V+Q +I + N ++ + A + V+ ++
Sbjct: 67 VPP---IPKKGDIVYARVIDVKQQAVLLRMIKIEGQENREIATSKLAGIHISQVKDGFVE 123
Query: 118 RIEMYKCYRPGDIILARLPLKELHSYQLSTAENELGVVIAL 158
++ ++ GDI+ AR+ E QL+T + +LGVV AL
Sbjct: 124 --DLRNEFKIGDIVRARVIADEKSPIQLTTKDPDLGVVYAL 162
>gi|510902646|ref|XP_004829953.1| hypothetical protein BEWA_031400 [Babesia equi]
gi|429328527|gb|AFZ80287.1| hypothetical protein BEWA_031400 [Babesia equi]
Length = 183
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Query: 18 SDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTAR 77
SD+V G TYVR +YS++ G I++ + N E + V + ++ P G VV A+
Sbjct: 16 SDLVPGNNTYVRDSMIYSSVLGNCIISR--DPNVEKGTVSVET--NQIKAPYVGAVVVAQ 71
Query: 78 IMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILARLPL 137
+ + + + +V+SV L ++ +L NV ++ + + ++PGDII A++
Sbjct: 72 VTKLHRKKLECNVVSVDGRVLKDPYKGVLASTNVHESKNIDVIISDWFKPGDIIKAKVIY 131
Query: 138 K-ELHSYQLSTAENELGVVIALSEAA 162
+ L+T+E +LGV+ A S
Sbjct: 132 AGDGKQIILTTSEVDLGVIKAQSATG 157
>gi|448517360|ref|XP_003867776.1| hypothetical protein CORT_0B06300 [Candida orthopsilosis Co 90-125]
gi|380352115|emb|CCG22339.1| hypothetical protein CORT_0B06300 [Candida orthopsilosis]
Length = 314
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 98 LSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVI 156
L +R ++R ++R+TE D++ + +C++PGDI+ + L + +Y STA N+LGVV+
Sbjct: 217 LGENYRGIIRASDIRSTERDKVIVGQCFKPGDIVRCMIISLGDGQNYYCSTARNDLGVVL 276
Query: 157 ALSEAAS 163
A S +
Sbjct: 277 AKSVGGA 283
>gi|336370583|gb|EGN98923.1| hypothetical protein SERLA73DRAFT_181651 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383362|gb|EGO24511.1| hypothetical protein SERLADRAFT_467947 [Serpula lacrymans var.
lacrymans S7.9]
Length = 190
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 8 IPGQRIC-QLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVI 66
+PGQ + L + G G Y + G + ++L G + S I +S + V
Sbjct: 9 LPGQPVAIPLGPTLQIGGGLYSKDGQVRASLIGV--------PRSKGSAITISRARPHV- 59
Query: 67 VPTPGDVVTARIMAVQ--QHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
PT G +V ++ + Q + V+ + ++R ++VR TE D++++ C
Sbjct: 60 -PTVGSIVLGTVIRLSPLQAIVAITVVDGVPLPTGDEYTGVIRTQDVRGTEKDKVKIGDC 118
Query: 125 YRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSEAASLF 165
+R GD++ + L + S ++TA N+LGV+ A SEA +
Sbjct: 119 FRGGDVVKGLVISLGDARSNYITTARNDLGVIFATSEAGATL 160
>gi|294893804|ref|XP_002774655.1| 3'-5' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239880048|gb|EER06471.1| 3'-5' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 198
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 12/119 (10%)
Query: 47 VEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTAL---SRTFR 103
V++N+ + V S + P+ GDVV AR+ + KA I V + A + +R
Sbjct: 47 VDNNR----VMVDSPTAPFVPPSAGDVVYARVARITTQ--KAECIIVADQAGRPNNCGYR 100
Query: 104 ALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENE--LGVVIALS 159
+R ++VR +ID + + C+RPGD+I + L + + SY L+T+ + LGVV+A S
Sbjct: 101 GHIRVQDVRYYDIDAVAIADCFRPGDLIKCKVLSIGDSRSYLLTTSGTDASLGVVMATS 159
>gi|258567054|ref|XP_002584271.1| hypothetical protein UREG_04960 [Uncinocarpus reesii 1704]
gi|237905717|gb|EEP80118.1| hypothetical protein UREG_04960 [Uncinocarpus reesii 1704]
Length = 262
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 67/224 (29%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVED--NKEVSVIEVS-- 59
P I +PGQR+ S G GTY+ + + +++ G V + + D K+ +I V+
Sbjct: 7 PSIAVPGQRLADT-SAYTSGPGTYIHEHSIRASIPGPVIVQESDTDQKGKKAKIITVARS 65
Query: 60 ----------------------SYKKEV-----IVPTPGDVVTARIMAVQQH-------- 84
S K + +PT G +V R+ VQ+
Sbjct: 66 SAPSTAPTTSTPAQPSGLALIGSTNKRIPLKFNTLPTVGSIVLGRVTRVQKRQATISILL 125
Query: 85 ------------------------LCKAHVISVGNTALSRTFR--ALLRRENVRATEIDR 118
L A + + ++ + R AL+R+E+VRA E DR
Sbjct: 126 VLPDQRATPTLDAEGASDADLPSILASASISTASDSLNADELRPQALIRKEDVRAVEKDR 185
Query: 119 IEMYKCYRPGDIILARL-PLKELHSYQLSTAENELGVVIALSEA 161
+ + + +R GDI+ A + + + +Y STA NELGVV+A S A
Sbjct: 186 VVVEESFRVGDIVRAVIVSVGDQVAYYASTAGNELGVVMARSSA 229
>gi|413939465|gb|AFW74016.1| hypothetical protein ZEAMMB73_791647 [Zea mays]
Length = 99
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 84 HLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILARL-------P 136
+ A ++ V + A+ F ++R+++VRATEID+++MY+ YRPGDI+ A +
Sbjct: 3 RMASADIMCVDSKAIREKFTGMIRQQDVRATEIDKVDMYQSYRPGDIVKAMVVSLIDEND 62
Query: 137 LKELHSYQLSTAENELGVVIALSEAASLFRSSEKLTN 173
++ S S + LG ++AL + S F S N
Sbjct: 63 AVQIISVFFSCYQPWLG-LLALRLSTSTFLSCRNFLN 98
>gi|353235843|emb|CCA67849.1| related to CSL4-exosome core component [Piriformospora indica DSM
11827]
Length = 211
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILAR-LPLKELHSYQLSTAENELGVVIALSE 160
+ ++R ++VRATE D++++ C+R GDI+ + + L + SY +STA N+LGV+ A S
Sbjct: 112 YVGIIRSQDVRATEKDKVKIGDCFRGGDIVAGQVISLGDSRSYYVSTAHNDLGVLYATSS 171
Query: 161 AA 162
+
Sbjct: 172 SG 173
>gi|239612967|gb|EEQ89954.1| exosome complex subunit Csl4 [Ajellomyces dermatitidis ER-3]
Length = 290
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSE 160
F+AL+R+E+VRA E DR+ M + +R GDI+ A + L + Y STA NELGVV+ SE
Sbjct: 201 FQALIRKEDVRAVEKDRVVMDEMFRVGDIVRAVVISLGDQSFYYCSTARNELGVVMGRSE 260
>gi|261189715|ref|XP_002621268.1| exosome complex subunit Csl4 [Ajellomyces dermatitidis SLH14081]
gi|239591504|gb|EEQ74085.1| exosome complex subunit Csl4 [Ajellomyces dermatitidis SLH14081]
Length = 290
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSE 160
F+AL+R+E+VRA E DR+ M + +R GDI+ A + L + Y STA NELGVV+ SE
Sbjct: 201 FQALIRKEDVRAVEKDRVVMDEMFRVGDIVRAVVISLGDQSFYYCSTARNELGVVMGRSE 260
>gi|240275275|gb|EER38789.1| exosome subunit Csl4 [Ajellomyces capsulatus H143]
Length = 289
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSE 160
F+AL+R+E+VRA E DR+ M + +R GDI+ A + L + Y STA N+LGVV+ SE
Sbjct: 200 FQALIRKEDVRAVEKDRVVMDEMFRVGDIVRAVVISLGDQSFYYCSTARNDLGVVMGRSE 259
Query: 161 AASLF 165
++
Sbjct: 260 EGNVL 264
>gi|225561671|gb|EEH09951.1| 3'-5' exoribonuclease CSL4 [Ajellomyces capsulatus G186AR]
Length = 290
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSE 160
F+AL+R+E+VRA E DR+ M + +R GDI+ A + L + Y STA N+LGVV+ SE
Sbjct: 201 FQALIRKEDVRAVEKDRVVMDEMFRVGDIVRAVVISLGDQSFYYCSTARNDLGVVMGRSE 260
Query: 161 AASLF 165
++
Sbjct: 261 EGNVL 265
>gi|154283085|ref|XP_001542338.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410518|gb|EDN05906.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 289
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSE 160
F+AL+R+E+VRA E DR+ M + +R GDI+ A + L + Y STA N+LGVV+ SE
Sbjct: 200 FQALIRKEDVRAVEKDRVVMDEMFRVGDIVRAVVISLGDQSFYYCSTARNDLGVVMGRSE 259
Query: 161 AASLF 165
++
Sbjct: 260 EGNVL 264
>gi|325091110|gb|EGC44420.1| exosome complex subunit Csl4 [Ajellomyces capsulatus H88]
Length = 289
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSE 160
F+AL+R+E+VRA E DR+ M + +R GDI+ A + L + Y STA N+LGVV+ SE
Sbjct: 200 FQALIRKEDVRAVEKDRVVMDEMFRVGDIVRAVVISLGDQSFYYCSTAGNDLGVVMGRSE 259
Query: 161 AASLF 165
++
Sbjct: 260 EGNVL 264
>gi|327352141|gb|EGE80998.1| exosome complex subunit Csl4 [Ajellomyces dermatitidis ATCC 18188]
Length = 260
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSE 160
F+AL+R+E+VRA E DR+ M + +R GDI+ A + L + Y STA NELGVV+ SE
Sbjct: 171 FQALIRKEDVRAVEKDRVVMDEMFRVGDIVRAVVISLGDQSFYYCSTARNELGVVMGRSE 230
>gi|332158210|ref|YP_004423489.1| exosome complex RNA-binding protein Csl4 [Pyrococcus sp. NA2]
gi|503513564|ref|WP_013748040.1| RNA-binding protein [Pyrococcus sp. NA2]
gi|331033673|gb|AEC51485.1| exosome complex RNA-binding protein Csl4 [Pyrococcus sp. NA2]
Length = 198
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 11/160 (6%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
+ N +PG+ + ++ + + G G V G LYST AG V I+K D E+S+ S
Sbjct: 11 VKNGDFVLPGEYLGVME-EYLPGDGVIVEDGNLYSTRAGWVRIDK---DKIEISLEPASK 66
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISV-GNT-ALSRTFRALLRRENVRATEIDR 118
+P GD+V AR++ V+Q +I + G + ++ + A + V+ ++
Sbjct: 67 VPP---IPKKGDIVYARVLDVKQQAVLLKLIKIEGQSRGVATSTLAGIHISQVKDGFVE- 122
Query: 119 IEMYKCYRPGDIILARLPLKELHSYQLSTAENELGVVIAL 158
++ ++ GDI+ AR+ E QL+T + +LGVV AL
Sbjct: 123 -DLRNEFKIGDIVRARVIADEKSPIQLTTKDPDLGVVYAL 161
>gi|403220682|dbj|BAM38815.1| 3'-5' exoribonuclease [Theileria orientalis strain Shintoku]
Length = 183
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 27 YVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLC 86
YV+ +YS + G VS + ED+ + SV VS++ K P G V A+I+ +
Sbjct: 24 YVKDSVIYSAILGNVSYSS--EDSTKTSVSVVSNHIKT---PYVGATVIAQIIKLNITKA 78
Query: 87 KAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILARLPLK-ELHSYQL 145
+ ++I V + F+ +L NV ++ + MY ++PGD I +++ E + L
Sbjct: 79 ECNIICVDGRFVKDYFKGVLSSNNVLESKNIEVFMYDWFKPGDFIKSKVIYAGEGKQFVL 138
Query: 146 STAENELGVV 155
STA +LGV+
Sbjct: 139 STAGLQLGVI 148
>gi|225677473|gb|EEH15757.1| exosome subunit Csl4 [Paracoccidioides brasiliensis Pb03]
Length = 290
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSE 160
F+AL+R+E+VR E D + M + +R GDI+ A + L + Y STA NELGVV+ SE
Sbjct: 201 FQALIRKEDVRTVEKDSVVMDEMFRVGDIVRAVVISLGDQSFYYCSTARNELGVVMGRSE 260
Query: 161 AASLF 165
A ++
Sbjct: 261 AGNVL 265
>gi|226295405|gb|EEH50825.1| 3'-5' exoribonuclease CSL4 [Paracoccidioides brasiliensis Pb18]
Length = 289
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSE 160
F+AL+R+E+VR E D + M + +R GDI+ A + L + Y STA NELGVV+ SE
Sbjct: 200 FQALIRKEDVRTVEKDSVVMDEMFRVGDIVRAVVISLGDQSFYYCSTARNELGVVMGRSE 259
Query: 161 AASLF 165
A ++
Sbjct: 260 AGNVL 264
>gi|295670659|ref|XP_002795877.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284962|gb|EEH40528.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 289
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 102 FRALLRRENVRATEIDRIEMYKCYRPGDIILA-RLPLKELHSYQLSTAENELGVVIALSE 160
F+AL+R+E+VR E D + M + +R GDI+ A + L + Y STA NELGVV+ SE
Sbjct: 200 FQALIRKEDVRTVEKDSVVMDEMFRVGDIVRAVVISLGDQSFYYCSTARNELGVVMGRSE 259
Query: 161 AASLF 165
A ++
Sbjct: 260 AGNVL 264
>gi|57641104|ref|YP_183582.1| exosome complex RNA-binding protein Csl4 [Thermococcus kodakarensis
KOD1]
gi|499569337|ref|WP_011250120.1| RNA-binding protein [Thermococcus kodakarensis]
gi|57159428|dbj|BAD85358.1| RNA-binding protein, containing S1 domain [Thermococcus
kodakarensis KOD1]
Length = 198
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
+ N + +PG + ++ + + G G G LY+T AG V I+ D E+SV V+
Sbjct: 7 VKNGDLVLPGDYLGVIE-EFLPGDGVREENGELYATRAGKVRID---SDKMEISVEPVTD 62
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRI- 119
+P GDVV R++ V+ +IS+ R A + + +EI
Sbjct: 63 VPP---LPRVGDVVIGRVVEVKPQAVIVQIISIEGRENDREI-ATSKLAGIHISEIKEGF 118
Query: 120 --EMYKCYRPGDIILARLPLKELHSYQLSTAENELGVVIALSEAA--SLFRSSEKL 171
++ K ++ GD+I AR+ E QLST +LGVV AL L R +KL
Sbjct: 119 VEDITKEFKIGDVIRARVIANEKSPIQLSTKGPDLGVVYALCSRCRTPLIRRGDKL 174
>gi|126465539|ref|YP_001040648.1| RNA-binding S1 domain-containing protein [Staphylothermus marinus
F1]
gi|500164315|ref|WP_011838931.1| RNA-binding protein S1 [Staphylothermus marinus]
gi|126014362|gb|ABN69740.1| RNA binding S1 domain protein [Staphylothermus marinus F1]
Length = 188
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 11 QRICQLDSDIVG-------GRGTYVR-QGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYK 62
Q + L D++G G+G YV +GYL S L G V I+ V+ V I Y
Sbjct: 6 QGVLVLPGDVIGVEEEYFPGQGVYVNGKGYLRSQLIGRVLIDI-VKRTINVRNIHGKPY- 63
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRT-FRALLRRENVRATEIDRIEM 121
VP GD+V + +V + L + ++ T F +L + I+ M
Sbjct: 64 ----VPKAGDIVEGIVSSVSEDLAFIDIYAIEEKPTRTTSFTGILHVSQASSEYIE--TM 117
Query: 122 YKCYRPGDIILARLPLKELHSYQLSTAENELGVVIAL-SEAASLFRSSE 169
Y R GDI+ AR+ + H +QL+T E LGV+ A ++ SL R +
Sbjct: 118 YDAMRIGDIVRARV-INSNHPFQLTTKEPRLGVIAAFCTKCGSLLRKQD 165
>gi|449310648|gb|AGE92551.1| Csl4p-like protein [Leishmania braziliensis]
Length = 281
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 40/180 (22%)
Query: 58 VSSYKKEVIVPTPGDVVTARI------------MAVQQHLCKAHVISVGNTAL----SRT 101
VSS + V+ P PGD V RI +AV C +S T S
Sbjct: 116 VSSSRHTVLGPRPGDTVHLRITRLNRLFAFGEVIAVNWRWCSHRSLSSAATGGGGNNSGV 175
Query: 102 FRALLRRENVRATEIDRIEMYK-----CYRPGDIILAR-LPLKELHSYQLSTAENELGVV 155
F+ +LR+E++R + + ++ + PGD++LA + ++H YQLST GVV
Sbjct: 176 FKGVLRQEDIRPFKPSKDQLLPPPPSLSFGPGDVVLAEVISQSDVHQYQLSTISEGCGVV 235
Query: 156 IALSEAASLFRSSEKLTNDIE--FLKQEKLKLYEELSSSQKENEILRQTTGDLEVRLMQM 213
E IE + QEK+KL E + + + ++ ++TG++ R +
Sbjct: 236 -------------ESFITTIEGRYGGQEKIKL-EHIPG--RRDAMMIRSTGEVVPRWCPL 279
>gi|389851564|ref|YP_006353798.1| exosome complex RNA-binding protein Csl4 [Pyrococcus sp. ST04]
gi|504546147|ref|WP_014733249.1| RNA-binding protein [Pyrococcus sp. ST04]
gi|388248870|gb|AFK21723.1| exosome complex RNA-binding protein Csl4 [Pyrococcus sp. ST04]
Length = 163
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 31 GYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHV 90
G LYST AG V I+K D E+S+ SS +P GD+V AR++ V+Q +
Sbjct: 4 GNLYSTRAGWVKIDK---DKIEISLKPASSTPP---IPKVGDIVYARVIDVKQQAVLLRM 57
Query: 91 ISV---GNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILARLPLKELHSYQLST 147
I + N ++ + A + V+ ++ ++ ++ GDI+ AR+ E QL+T
Sbjct: 58 IKIEGKDNREIATSKLAGIHISQVKDGFVE--DLRNEFKIGDIVRARVITDEKSPIQLTT 115
Query: 148 AENELGVVIAL 158
+ +LGVV AL
Sbjct: 116 KDPDLGVVYAL 126
>gi|118373331|ref|XP_001019859.1| hypothetical protein TTHERM_00586540 [Tetrahymena thermophila]
gi|89301626|gb|EAR99614.1| hypothetical protein TTHERM_00586540 [Tetrahymena thermophila
SB210]
Length = 309
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 17/137 (12%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
I +PG I + + + G GTY G +YS++ GTV V+ NK +SV + SY
Sbjct: 26 IVLPGDVIKK-EKGFMNGHGTYEENGIIYSSVIGTV-----VQTNKLLSVSPLKSY---- 75
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
P GD+V R+M + K + S N S + E T+ D + M +
Sbjct: 76 YTPQVGDIVVGRVMEIGDKKWKIEIGS--NQYASLHLNSTYIPEQRIKTDEDELNMRQIM 133
Query: 126 RPGDIILARLPLKELHS 142
+ GD+ A E+HS
Sbjct: 134 KEGDLACA-----EIHS 145
>gi|154338024|ref|XP_001565238.1| putative Csl4p homologue [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134062285|emb|CAM36674.1| putative Csl4p homologue [Leishmania braziliensis MHOM/BR/75/M2904]
gi|449310624|gb|AGE92539.1| Csl4p-like protein [Leishmania braziliensis]
Length = 281
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 40/180 (22%)
Query: 58 VSSYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSR----------------T 101
VSS + V+ P PGD+V RI + + VI+V S
Sbjct: 116 VSSSRHTVLGPRPGDIVHLRITRLNRLFAFGEVIAVNWRWCSHRSLSSAAAGGGGNNSGV 175
Query: 102 FRALLRRENVRATEIDRIEMYK-----CYRPGDIILAR-LPLKELHSYQLSTAENELGVV 155
F+ +LR+E++R + + ++ + PGD++LA + ++H YQLST GVV
Sbjct: 176 FKGVLRQEDIRPFKPSKDQLLPPPPSLSFGPGDVVLAEVISQSDVHQYQLSTISEGCGVV 235
Query: 156 IALSEAASLFRSSEKLTNDIE--FLKQEKLKLYEELSSSQKENEILRQTTGDLEVRLMQM 213
E IE + QEK+KL E + + + ++ ++TG++ R +
Sbjct: 236 -------------ESFITTIEGRYGGQEKIKL-EHIPG--RRDAMMIRSTGEVVPRWCPL 279
>gi|509155011|ref|YP_008075251.1| exosome complex RNA-binding protein Rrp4 [Methanobrevibacter sp.
AbM4]
gi|511307285|ref|WP_016358510.1| exosome complex RNA-binding protein Rrp4 [Methanobrevibacter sp.
AbM4]
gi|509084561|gb|AGN16807.1| exosome complex RNA-binding protein Rrp4 [Methanobrevibacter sp.
AbM4]
Length = 334
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 21/132 (15%)
Query: 3 NPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYK 62
N + IPG + D D GRGT+ G + S+L G VS+ NK++SVI + S
Sbjct: 6 NKDLVIPGDVLA--DEDFYSGRGTFKENGQICSSLMGLVSLR-----NKKISVIPLKSK- 57
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
VP GDVV +I V+ S+ + ++ + ++ V D+ +
Sbjct: 58 ---YVPKKGDVVIGKIEDVR--------FSMWDVDINSPYSGIIPSSEVFGR--DKKSLS 104
Query: 123 KCYRPGDIILAR 134
K + GD++ R
Sbjct: 105 KVFDVGDVLFLR 116
>gi|440492276|gb|ELQ74858.1| Exosomal 3'-5' exoribonuclease complex, subunit Rrp4
[Trachipleistophora hominis]
Length = 217
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 27/197 (13%)
Query: 8 IPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIV 67
IPG+++C ++ +I TY ++S++ GT++ NK V V ++Y+ +
Sbjct: 3 IPGEKVCDIEDNIYS-HNTYPHNTSIHSSVLGTLT-----RINKLVMVEPCTTYRY---I 53
Query: 68 PTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRP 127
P GD++ R+ + K + LS T AL R E D + M+ +
Sbjct: 54 PLAGDIIVGRVSMLSVKRWKIEANAQLECILSLTTIALPDNVQRRKLEQDEMLMHSFFDV 113
Query: 128 GDIILARLPLKELHSYQLSTAENELGVVIALSEAASLFRSSEKLTNDIEFLKQEKLKLYE 187
GD+++A + L S LST + G KLTN + L+ L++
Sbjct: 114 GDVLVAEIQKVNLGSAVLSTRNEKYG----------------KLTNGV--LRVVPLRIVG 155
Query: 188 ELSSSQKENEILRQTTG 204
SS ENE L+ G
Sbjct: 156 SYKSSFVENEHLKFVIG 172
>gi|297526176|ref|YP_003668200.1| RNA-binding protein [Staphylothermus hellenicus DSM 12710]
gi|502907523|ref|WP_013142499.1| RNA-binding protein S1 [Staphylothermus hellenicus]
gi|297255092|gb|ADI31301.1| RNA-binding protein (consists of S1 domain and a Zn-ribbon
domain)-like protein [Staphylothermus hellenicus DSM
12710]
Length = 188
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 20/172 (11%)
Query: 11 QRICQLDSDIVG-------GRGTYVR-QGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYK 62
Q I L D++G G+G YV +GYL S L G V I+ V+ V + Y
Sbjct: 6 QGILVLPGDVLGVEEEYFPGQGVYVNGKGYLRSQLVGRVLIDI-VKRTTNVRSVHGKPY- 63
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRT-FRALLRRENVRATEIDRIEM 121
VP GD+V + +V + L + + T F +L + I+ M
Sbjct: 64 ----VPKVGDIVEGIVSSVSEDLAFIDIYATEEKPTRTTSFTGILHISQASSEYIE--TM 117
Query: 122 YKCYRPGDIILARLPLKELHSYQLSTAENELGVVIALSE--AASLFRSSEKL 171
Y R GDI+ AR+ + H +QL+T E LGV+ A + L + +KL
Sbjct: 118 YDAMRIGDIVRARV-INNNHPFQLTTKEPGLGVIAAFCTKCGSPLRKQDDKL 168
>gi|315230253|ref|YP_004070689.1| hypothetical protein TERMP_00489 [Thermococcus barophilus MP]
gi|503232103|ref|WP_013466764.1| RNA-binding protein [Thermococcus barophilus]
gi|315183281|gb|ADT83466.1| hypothetical protein TERMP_00489 [Thermococcus barophilus MP]
Length = 200
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
+ N +PG + ++ + + G G G LYST AG V IN ++ E+SV+ V+
Sbjct: 11 VKNGDFVLPGDYLGVIE-EFLPGDGVIEENGELYSTRAGKVKIN---QEKMEISVVPVTD 66
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRI- 119
+P G +V A+++ V+ ++ + R A + + +++
Sbjct: 67 TPP---IPKVGQIVIAKVIEVKPQAAIVQLLRIEGREDYREI-ATSKLAGIHISQVKEGF 122
Query: 120 --EMYKCYRPGDIILARLPLKELHSYQLSTAENELGVVIAL 158
+M K ++ GDI+ AR+ E QL+T +LGVV AL
Sbjct: 123 VEDMSKEFKIGDIVRARVLTDEKSPIQLTTRAPDLGVVFAL 163
>gi|426365781|ref|XP_004049945.1| PREDICTED: exosome complex component CSL4-like [Gorilla gorilla
gorilla]
Length = 66
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 4 PPI--CIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVS 54
PP+ CIPG+R+C L+ G GTY R GY++S+LAG + N KE +
Sbjct: 3 PPVRYCIPGERLCNLEEG-SPGSGTYTRHGYIFSSLAGCLVKNSENGAVKEAA 54
>gi|401422619|ref|XP_003875797.1| putative Csl4p homologue [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322492036|emb|CBZ27311.1| putative Csl4p homologue [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 285
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 39/179 (21%)
Query: 58 VSSYKKEVIVPTPGDVVTAR------------IMAVQQHLCKAHVI---SVGNTALSRTF 102
VSS ++ V+ P PGD V R I+AV C I + G + S F
Sbjct: 121 VSSPRQAVLGPRPGDTVHLRITRLNRLFAFGEIIAVNWSWCSHRSIFSAAAGGGSNSGVF 180
Query: 103 RALLRRENVRATEIDRIEMYK-----CYRPGDIILAR-LPLKELHSYQLSTAENELGVVI 156
+ +LR+E++R + + ++ + GD++LA + ++H YQLST GVV
Sbjct: 181 KGVLRQEDIRPFKPTKDQLLPPPPSLAFGVGDVVLAEVISQSDVHQYQLSTTGEGCGVV- 239
Query: 157 ALSEAASLFRSSEKLTNDIE--FLKQEKLKLYEELSSSQKENEILRQTTGDLEVRLMQM 213
E +E + Q K+KL E + + + ++ ++TG++ R +
Sbjct: 240 ------------ESFITAVEGQYGGQAKVKL-EHVPG--RRDAMMIRSTGEVVPRWCPL 283
>gi|19113896|ref|NP_592984.1| exosome subunit Rrp4 (predicted) [Schizosaccharomyces pombe 972h-]
gi|1175376|sp|Q09704.1|RRP4_SCHPO RecName: Full=Exosome complex component rrp4; AltName:
Full=Ribosomal RNA-processing protein 4
gi|1052797|emb|CAA90501.1| exosome subunit Rrp4 (predicted) [Schizosaccharomyces pombe]
Length = 329
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 10/130 (7%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+ PGQ + D + G GTY G +Y+++AG+V NK +SV + S
Sbjct: 57 LVTPGQLVTD-DPQFMRGHGTYFEDGGIYASVAGSVQ-----RVNKLISVKPLRSK---- 106
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
VP GD++ +I VQ K + + N L + L R E D ++M +
Sbjct: 107 YVPEIGDLIIGKIAEVQPKRWKVDIGAKQNAVLMLSSINLPGGIQRRKLETDELQMRSFF 166
Query: 126 RPGDIILARL 135
+ GD+++A +
Sbjct: 167 QEGDLLVAEV 176
>gi|495791622|ref|WP_008516201.1| putative RNA-binding protein (consists of S1 domain and a Zn-ribbon
domain) [Methanobacterium sp. Maddingley MBC34]
gi|410597320|gb|EKQ51947.1| putative RNA-binding protein (consists of S1 domain and a Zn-ribbon
domain) [Methanobacterium sp. Maddingley MBC34]
Length = 189
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 26 TYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAV--QQ 83
TY G + S +AGTV+I+ + NK++S+I + K + GDVV +I V Q+
Sbjct: 27 TYDDHGEIRSLVAGTVTID---QKNKKISIIPKA---KSPAILKKGDVVLGQIRDVRGQR 80
Query: 84 HLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILARLP-LKELHS 142
L I +L TF + R +D+ + + GD+I AR+ + + +
Sbjct: 81 ALVDVEGIKDSKRSLPVTFLGAIHISQARKGYVDK--LTDDFHIGDLIQARVTKVMGVDN 138
Query: 143 YQLSTAENELGVVIALSEAASLF 165
L+TAE ELGV+ A+ F
Sbjct: 139 ADLTTAETELGVLKAMCTNCRHF 161
>gi|403365220|gb|EJY82389.1| Rrp4-PA [Oxytricha trifallax]
Length = 309
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 12/126 (9%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
I +PG + D + G GTY + G +Y++LAG V H D VI V K
Sbjct: 17 IVVPGDYV---DEGFIAGHGTYEQDGKIYASLAGIV----HRID----KVICVRPLKTS- 64
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
P GDV+ RI++V+ + S + L+ T L R +E D+++M +
Sbjct: 65 FKPDIGDVIIGRIVSVENKRWAVDINSYQHAVLNLTNINLPGGLQRRRSEEDKMQMRSFF 124
Query: 126 RPGDII 131
+ DII
Sbjct: 125 KENDII 130
>gi|490128962|ref|WP_004029371.1| RNA-binding protein [Methanobacterium formicicum]
gi|407816241|gb|EKF86803.1| RNA-binding protein [Methanobacterium formicicum DSM 3637]
Length = 189
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 26 TYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAV--QQ 83
TY G + S +AGTV+I+ + NK++S+I + K + GDVV +I V Q+
Sbjct: 27 TYDDHGEIRSLVAGTVTID---QKNKKISIIPKT---KSPAILKKGDVVLGQIRDVRGQR 80
Query: 84 HLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILARLP-LKELHS 142
L I +L TF + R +D+ + + GD+I AR+ + + +
Sbjct: 81 ALVDVEGIKNSKRSLPITFLGAIHISQARKGYVDK--LTDDFHIGDLIQARVTKVMGVDN 138
Query: 143 YQLSTAENELGVVIALSEAASLF 165
L+TAE ELGV+ A+ F
Sbjct: 139 ADLTTAETELGVLKAMCTNCRHF 161
>gi|156937370|ref|YP_001435166.1| RNA-binding protein [Ignicoccus hospitalis KIN4/I]
gi|500800514|ref|WP_011998611.1| RNA-binding protein [Ignicoccus hospitalis]
gi|156566354|gb|ABU81759.1| RNA-binding protein (consists of S1 domain and a Zn-ribbon
domain)-like protein [Ignicoccus hospitalis KIN4/I]
Length = 192
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVP 68
PG +C ++ + G GTY G + +++ GTV I + VIEV E V
Sbjct: 12 PGDPLCVIE-EYAPGPGTYEDDGIVRASIPGTVRI------DTVNYVIEVRGPSAEKKVL 64
Query: 69 TPGDVVTARIMAVQQHLCKAHVI-SVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRP 127
+P +VV +++++ L + V S +R F A+L +D +Y RP
Sbjct: 65 SPKEVVYGEVVSMRNELAQLKVARSFDEVFRARAFSAVLHISQA-GKPVD--SLYDVVRP 121
Query: 128 GDIILARLPLKELHSYQLSTAENELGVVIA 157
GD++ A+ + YQLS LGV++A
Sbjct: 122 GDVVKAK--VLSSPPYQLSLKGPRLGVILA 149
>gi|170586918|ref|XP_001898226.1| exosome component 2 [Brugia malayi]
gi|158594621|gb|EDP33205.1| exosome component 2, putative [Brugia malayi]
Length = 295
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 22/142 (15%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS-YKKE 64
+ +PG ++ + D + G GTY R L +++AGTV + NK VSV + S Y E
Sbjct: 28 LIVPGAKVTS-NPDFMRGHGTYTRDDNLIASVAGTVE-----QVNKLVSVRPLKSRYNGE 81
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRAL----LRRENVRATEIDRIE 120
+ GDVV RI VQQ K S N+ L + L LRR++V D
Sbjct: 82 I-----GDVVIGRITEVQQKRWKVETNSRLNSTLLLSSVNLPGGELRRKSVE----DERM 132
Query: 121 MYKCYRPGDIILARLPLKELHS 142
M + + GD+I A ++++HS
Sbjct: 133 MREYLKEGDLISAE--VQKVHS 152
>gi|223478609|ref|YP_002583387.1| RNA-binding protein [Thermococcus sp. AM4]
gi|503887497|ref|WP_014121491.1| RNA-binding protein [Thermococcus sp. AM4]
gi|214033835|gb|EEB74661.1| RNA-binding protein, containing S1 domain [Thermococcus sp. AM4]
Length = 195
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 13/154 (8%)
Query: 23 GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQ 82
G G G L +T AG V IN+ + E+SV V+ +P GD V A+++ V+
Sbjct: 28 GEGVKEENGNLIATRAGKVRINR---ERMEISVEPVTDTPP---LPEVGDTVLAQVLEVK 81
Query: 83 QHLCKAHVISV---GNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILARLPLKE 139
+ ++ + G+ ++ + A + V+ ++ +M K ++ GDI+ AR+ E
Sbjct: 82 PQVVIVQLLRIEGKGSREIATSKLAGIHVSQVKNGFVE--DMGKEFKVGDIVRARVISNE 139
Query: 140 LHSYQLSTAENELGVVIALSEAA--SLFRSSEKL 171
QL+T ELGVV A L R +KL
Sbjct: 140 KSPIQLTTRAPELGVVYAFCSRCRTPLIRRGDKL 173
>gi|358060848|dbj|GAA93466.1| hypothetical protein E5Q_00107 [Mixia osmundae IAM 14324]
Length = 316
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 26/136 (19%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEV-SSYKKE 64
+ +PG+ + D + G GTYV + ST+AGTV NK VSV + YK E
Sbjct: 28 VSVPGEFLAS-SHDWMRGHGTYVADESVVSTMAGTVD-----RVNKLVSVRALRGRYKPE 81
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRE-NV------RATEID 117
V GD++ RI+ VQ K A SR F +LL N+ R E D
Sbjct: 82 V-----GDLIIGRIVEVQAKRWKVD-------ASSRQFASLLLSSINLPGGVQRRKLESD 129
Query: 118 RIEMYKCYRPGDIILA 133
++M ++ GD+++A
Sbjct: 130 ELQMRTFFQEGDLLVA 145
>gi|429965501|gb|ELA47498.1| hypothetical protein VCUG_01030 [Vavraia culicis 'floridensis']
Length = 237
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 99/244 (40%), Gaps = 31/244 (12%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKK 63
P + IPG+++C ++ D + TY ++S++ GT++ NK V + + Y+
Sbjct: 19 PNMFIPGEKVCDIE-DSIYSHNTYPHNTSIHSSVLGTLT-----RINKLVMIEPCTRYRY 72
Query: 64 EVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYK 123
+P GD++ R+ + K + L+ T AL R E D + M+
Sbjct: 73 ---IPLAGDIIVGRVAMLSVKRWKIEANAQLECILNLTTIALPDNAQRRKLEQDEMLMHS 129
Query: 124 CYRPGDIILARLPLKELHSYQLSTAENELGVVIALSEAASLFRSSEKLTNDIEFLKQEKL 183
+ D+++A + + S LST G KLTN + LK L
Sbjct: 130 FFDVDDVLVAEIQKVNVGSAVLSTRNERYG----------------KLTNGV--LKIVPL 171
Query: 184 KLYEELSSSQKENEILRQTTGDLEVRLMQM--NEVKG--EMEFKIKELNKKNQSESKLSD 239
SS ENE LR G +Q+ NE G +M ++ L+K + D
Sbjct: 172 CAVGSYRSSFVENEQLRFVVGANGYVFIQLRKNEAVGYAKMVAAVQYLDKCAAQGCAIDD 231
Query: 240 TIRE 243
I E
Sbjct: 232 KILE 235
>gi|402590946|gb|EJW84876.1| exosome complex exonuclease RRP4 [Wuchereria bancrofti]
Length = 295
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 22/142 (15%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS-YKKE 64
+ +PG ++ + D + G GTY+R L +++AGTV + NK VSV + S Y E
Sbjct: 28 LIVPGAKVTS-NPDFMRGHGTYMRDDNLIASVAGTVE-----QVNKLVSVRPLKSRYNGE 81
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRAL----LRRENVRATEIDRIE 120
+ GDVV RI VQQ K S N+ L + L LRR++V D
Sbjct: 82 I-----GDVVIGRITEVQQKRWKVETNSRLNSTLLLSSVNLPGGELRRKSVE----DERM 132
Query: 121 MYKCYRPGDIILARLPLKELHS 142
M + + GD+I A ++++HS
Sbjct: 133 MREYLKEGDLISAE--VQKVHS 152
>gi|312065758|ref|XP_003135945.1| Rrp4-PA [Loa loa]
gi|307768889|gb|EFO28123.1| Rrp4-PA [Loa loa]
Length = 295
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 22/142 (15%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS-YKKE 64
+ +PG ++ + D + G GTY+R L +++AGTV + NK VSV + S Y E
Sbjct: 28 LIVPGAKVTS-NPDFMRGHGTYMRGNDLIASVAGTVE-----QVNKLVSVRPLKSRYNGE 81
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRAL----LRRENVRATEIDRIE 120
+ GDVV RI VQQ K S N+ L + L LRR++V D
Sbjct: 82 I-----GDVVIGRITEVQQKRWKVETNSRLNSTLLLSSVNLPGGELRRKSVE----DERM 132
Query: 121 MYKCYRPGDIILARLPLKELHS 142
M + + GD+I A ++++HS
Sbjct: 133 MREYLKEGDLISAE--VQKVHS 152
>gi|341581754|ref|YP_004762246.1| exosome complex RNA-binding protein Csl4 [Thermococcus sp. 4557]
gi|503778256|ref|WP_014012253.1| RNA-binding protein [Thermococcus sp. 4557]
gi|340809412|gb|AEK72569.1| exosome complex RNA-binding protein Csl4 [Thermococcus sp. 4557]
Length = 196
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 15/175 (8%)
Query: 3 NPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYK 62
N I +PG + ++ + G G G LY+ AG V I+ +D E+SV V+
Sbjct: 9 NGDIVLPGDYLGVIE-EYFPGEGVKEENGELYAVRAGKVVID---QDRMEISVEPVTDTP 64
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISV----GNTALSRTFRALLRRENVRATEIDR 118
+P GDVV A ++ V+ +I + + ++ + A + VR ++
Sbjct: 65 P---LPQVGDVVIANVIEVKPQAAIVQLIKIEGREDDREIATSKLAGIHISQVRDGYVE- 120
Query: 119 IEMYKCYRPGDIILARLPLKELHSYQLSTAENELGVVIALSEAA--SLFRSSEKL 171
M ++ GDI+ AR+ E QLST +LGVV AL L R +KL
Sbjct: 121 -GMSTEFKVGDIVRARVVATEKSPIQLSTKGPDLGVVYALCSRCRTPLVRRGDKL 174
>gi|337285376|ref|YP_004624850.1| exosome complex RNA-binding protein Csl4 [Pyrococcus yayanosii CH1]
gi|503672557|ref|WP_013906633.1| RNA-binding protein [Pyrococcus yayanosii]
gi|334901310|gb|AEH25578.1| exosome complex RNA-binding protein Csl4 [Pyrococcus yayanosii CH1]
Length = 196
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 15/141 (10%)
Query: 23 GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTP--GDVVTARIMA 80
G G +G LY+T AG V IN + +E+S + P P DVV AR++
Sbjct: 29 GDGVIEEEGNLYATRAGMVRINP--------AKMEISVEPATDVPPMPKVNDVVYARVIE 80
Query: 81 VQQHLCKAHVISV---GNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILARLPL 137
V+ +I + + ++ + A + V+ ++ +M K ++ GDI+ AR+
Sbjct: 81 VKSQAILLQLIKIEGRNDREIAASKLAGIHISQVKDGFVE--DMGKEFKVGDIVRARVIA 138
Query: 138 KELHSYQLSTAENELGVVIAL 158
E QL+T +LGVV AL
Sbjct: 139 DEKSPIQLTTKGQDLGVVFAL 159
>gi|490168185|ref|WP_004066829.1| RNA-binding protein [Thermococcus litoralis]
gi|374743027|gb|EHR79399.1| exosome complex RNA-binding protein Csl4 [Thermococcus litoralis
DSM 5473]
Length = 199
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
I +PG + ++ + + G G G LY+ AG V IN + E+SV ++
Sbjct: 14 IVLPGDYLGVIE-EFLPGEGIIEENGELYAARAGRVRINP---EKIEISVEPLTDTPP-- 67
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISV----GNTALSRTFRALLRRENVRATEIDRIEM 121
+P GDVV AR++ V+ ++ + G ++ + A + VR ++ M
Sbjct: 68 -LPQVGDVVIARVIEVKPQAAIVQLLRIEGRKGYREIATSKLAGIHISQVRDGYVE--SM 124
Query: 122 YKCYRPGDIILARLPLKELHSYQLSTAENELGVVIALSEAA 162
++ GDI+ AR+ E QL+T ++LGVV AL +
Sbjct: 125 SNEFKIGDIVRARVLTNEKSPIQLTTKGSDLGVVYALCSSC 165
>gi|518093956|ref|WP_019264164.1| RNA-binding protein [Methanobrevibacter smithii]
Length = 298
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 21/132 (15%)
Query: 3 NPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYK 62
N + IPG+ + D + GRGT+ G + S+L G VS+ NK++ VI + S
Sbjct: 6 NKDLVIPGEVLA--DDEYYSGRGTFKEDGKICSSLMGLVSLR-----NKKIRVIPLKSK- 57
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
VP GDVV +I V+ S+ + ++ + +L V E + E+
Sbjct: 58 ---YVPKKGDVVIGKIKDVR--------FSMWDVDINSPYSGILPAFEVFGRE--KKELN 104
Query: 123 KCYRPGDIILAR 134
K + GD++ R
Sbjct: 105 KVFDVGDVLFLR 116
>gi|313216916|emb|CBY38128.1| unnamed protein product [Oikopleura dioica]
Length = 288
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 116/271 (42%), Gaps = 45/271 (16%)
Query: 1 MSNPPICI-PGQRICQLDSDIVGGRGTY-VRQGYLYSTLAGTVSINKHVEDNKEVSVIEV 58
M + C+ PG I + ++D + G GTY L +++AGTV NK ++V
Sbjct: 20 MDDEETCVNPGDVITE-NTDFMRGHGTYQASSNELRASVAGTVE-----RINKLITVRPA 73
Query: 59 S-SYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEID 117
Y EV GD+V RI+ VQQ L K + N L+ L E R D
Sbjct: 74 KMRYNGEV-----GDIVVGRIIEVQQKLWKVDCGTRLNAFLNLAAVNLPGGELRRRGADD 128
Query: 118 RIEMYKCYRPGDIILARLPLKE------LHSYQLSTAENELGVVIALSEAASLFRSSEK- 170
+ M K + GD+ILA + LH+ L + GV+I +S SL R ++
Sbjct: 129 ELVMRKFLQEGDLILAEVQKAREDGHLNLHTRSLKYGKLGPGVLIIVS--PSLIRRRKQH 186
Query: 171 ------------LTNDIEF---LKQEKLKLYEELSSSQKENEI-LRQTTGDLEVRLMQMN 214
TN + L +E + + +E+ S+ +EN LRQ T L + +
Sbjct: 187 IHNLPCGVTAILATNGFVYFCPLVEEDISIVKEVDSATRENICRLRQVTLSLAKHRVSLY 246
Query: 215 E------VKGEMEFKIKELNKKNQSESKLSD 239
+ + + F + E++ ++ E L++
Sbjct: 247 DSSLLYGFEASLHFPVAEISYESNEEEWLAE 277
>gi|148642303|ref|YP_001272816.1| exosome complex RNA-binding protein Rrp4 [Methanobrevibacter
smithii ATCC 35061]
gi|500587967|ref|WP_011953778.1| RNA-binding protein [Methanobrevibacter smithii]
gi|166919579|sp|A5UJS0.1|ECR1_METS3 RecName: Full=Probable exosome complex RNA-binding protein 1
gi|148551320|gb|ABQ86448.1| RNA-binding protein Rrp4 [Methanobrevibacter smithii ATCC 35061]
Length = 298
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 21/132 (15%)
Query: 3 NPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYK 62
N + IPG+ + D + GRGT+ G + S+L G VS+ NK++ VI + S
Sbjct: 6 NKDLVIPGEVLA--DDEYYSGRGTFKENGKICSSLMGLVSLR-----NKKIRVIPLKSK- 57
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
VP GDVV +I V+ S+ + ++ + +L V E + E+
Sbjct: 58 ---YVPKKGDVVIGKIKDVR--------FSMWDVDINSPYSGILPAFEVFGRE--KKELN 104
Query: 123 KCYRPGDIILAR 134
K + GD++ R
Sbjct: 105 KVFDVGDVLFLR 116
>gi|490133952|ref|WP_004034313.1| RNA-binding protein [Methanobrevibacter smithii]
gi|222434091|gb|EEE41256.1| KH domain protein [Methanobrevibacter smithii DSM 2375]
gi|288860273|gb|EFC92571.1| KH domain protein [Methanobrevibacter smithii DSM 2374]
gi|524835461|emb|CDF29876.1| probable exosome complex RNA-binding protein 1 [Methanobrevibacter
smithii CAG:186]
Length = 298
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 21/132 (15%)
Query: 3 NPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYK 62
N + IPG+ + D + GRGT+ G + S+L G VS+ NK++ VI + S
Sbjct: 6 NKDLVIPGEVLA--DDEYYSGRGTFKENGKICSSLMGLVSLR-----NKKIRVIPLKSK- 57
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
VP GDVV +I V+ S+ + ++ + +L V E + E+
Sbjct: 58 ---YVPKKGDVVIGKIKDVR--------FSMWDVDINSPYSGILPAFEVFGRE--KKELN 104
Query: 123 KCYRPGDIILAR 134
K + GD++ R
Sbjct: 105 KVFDVGDVLFLR 116
>gi|296241784|ref|YP_003649271.1| RNA-binding protein [Thermosphaera aggregans DSM 11486]
gi|502893936|ref|WP_013128912.1| RNA-binding protein [Thermosphaera aggregans]
gi|296094368|gb|ADG90319.1| RNA-binding protein (consists of S1 domain and a Zn-ribbon domain)
[Thermosphaera aggregans DSM 11486]
Length = 184
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 87/174 (50%), Gaps = 15/174 (8%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYV-RQGYLYSTLAGTVSINKHVEDNKEVSVIEVS 59
MS+ +PG+ + ++ + + +G YV +QGYL + + GTV V D + +++
Sbjct: 1 MSSVKAVVPGEAL-GVEEEAIPVQGVYVDKQGYLRALVVGTV-----VMDKLKKTIMVRP 54
Query: 60 SYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRI 119
+ K+E+ + PG +V A ++++ + ++ + + F +L V + +
Sbjct: 55 ANKRELGL-RPGALVEAIVVSMSDDIAVLNIYNANGVPVD--FSGILHVTQVSSEYVK-- 109
Query: 120 EMYKCYRPGDIILARLPLKELHSYQLSTAENELGVVIALSEAAS--LFRSSEKL 171
++ RPGDI+ AR+ + YQ+S + LGVV A L+++ EKL
Sbjct: 110 TLWDVLRPGDIVRARV-INSFIPYQVSIKDPGLGVVAARCSVCGDLLYKAGEKL 162
>gi|313233921|emb|CBY10089.1| unnamed protein product [Oikopleura dioica]
Length = 288
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 116/271 (42%), Gaps = 45/271 (16%)
Query: 1 MSNPPICI-PGQRICQLDSDIVGGRGTY-VRQGYLYSTLAGTVSINKHVEDNKEVSVIEV 58
M + C+ PG I + ++D + G GTY L +++AGTV NK ++V
Sbjct: 20 MDDEETCVNPGDVITE-NTDFMRGHGTYQASSNELRASVAGTVE-----RINKLITVRPA 73
Query: 59 S-SYKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEID 117
Y EV GD+V RI+ VQQ L K + N L+ L E R D
Sbjct: 74 KMRYNGEV-----GDIVVGRIIEVQQKLWKVDCGTRLNAFLNLAAVNLPGGELRRRGADD 128
Query: 118 RIEMYKCYRPGDIILARLPLKE------LHSYQLSTAENELGVVIALSEAASLFRSSEKL 171
+ M K + GD+ILA + LH+ L + GV+I +S SL R ++
Sbjct: 129 ELVMRKFLQEGDLILAEVQKAREDGHLNLHTRSLKYGKLGPGVLIIVS--PSLIRRRKQH 186
Query: 172 TNDIEF----------------LKQEKLKLYEELSSSQKENEI-LRQTTGDLEVRLMQMN 214
+++ L +E + + +E+ S+ +EN LRQ T L + +
Sbjct: 187 IHNLPCGVTAILAINGFVYFCPLVEEDISIVKEVDSATRENICRLRQVTLSLAKHRVSLY 246
Query: 215 E------VKGEMEFKIKELNKKNQSESKLSD 239
+ + + F + E++ ++ E L++
Sbjct: 247 DSSLLYGFEASLHFPVAEISYESNEEEWLAE 277
>gi|519110067|ref|WP_020265942.1| hypothetical protein [candidate division pSL4 archaeon SCGC
AAA471-G05]
Length = 195
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 19/151 (12%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+ +PG+R+ ++ + G ++ G+L + G ++ N VSV + + +K V
Sbjct: 9 LVLPGERLGVIEEYLPGTGVKALKSGHLVAAYGGYAEYDRR---NHIVSVRPLRAVRKPV 65
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCY 125
+ GD V AR+ +Q+ + + V+ + + L+ ++ L R + +D Y
Sbjct: 66 V----GDTVLARVREIQEKVIWSDVLVILGSKLTTSYSGALLR---KGQGLD-------Y 111
Query: 126 RPGDIILARLPLKELHS-YQLSTAENELGVV 155
PGDI LA++ + EL Y LS ELG+V
Sbjct: 112 VPGDIYLAKV-VDELSGIYTLSVEGKELGLV 141
>gi|300175432|emb|CBK20743.2| unnamed protein product [Blastocystis hominis]
Length = 189
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 16 LDSDIVGGRGTYVRQGYLYSTLAGTV-SINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVV 74
+++ + G G YV+ G + +++ G V +NK +I V S K I P GDVV
Sbjct: 1 METHFLRGHGVYVKDGKMIASVCGVVERVNK---------LISVRSLKSRYI-PKIGDVV 50
Query: 75 TARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILA 133
AR++ + + S N+ LS L E+ R + D ++M + P DII A
Sbjct: 51 VARVLGIVGSSWDMDIASYQNSVLSINSILLPGGEHRRRNDADVLQMRSIFVPNDIISA 109
>gi|240103062|ref|YP_002959371.1| exosome complex RNA-binding protein Csl4 [Thermococcus
gammatolerans EJ3]
gi|506338902|ref|WP_015858621.1| RNA-binding protein [Thermococcus gammatolerans]
gi|239910616|gb|ACS33507.1| RNA-binding protein, containing S1 RNA binding domain [Thermococcus
gammatolerans EJ3]
Length = 195
Score = 43.5 bits (101), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 13/154 (8%)
Query: 23 GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQ 82
G G G L +T AG V IN+ + E+SV V+ +P GD V A+++ V+
Sbjct: 28 GEGVKEENGNLIATRAGRVKINR---EKMEISVEPVTDTPP---LPEVGDTVLAQVLEVK 81
Query: 83 QHLCKAHVISV---GNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILARLPLKE 139
+ ++ + G+ ++ + A + V+ ++ +M + ++ GDI+ AR+ E
Sbjct: 82 PQVVIVQLLRIEGKGSREIATSKLAGIHVSQVKNGFVE--DMSREFKVGDIVRARVISNE 139
Query: 140 LHSYQLSTAENELGVVIALSEAA--SLFRSSEKL 171
QL+T +LGVV A L R +KL
Sbjct: 140 KSPIQLTTRAPDLGVVYAFCSRCRTPLIRRGDKL 173
>gi|478482201|ref|YP_007712851.1| RNA-binding protein, containing S1 domain [Candidatus
Methanomethylophilus alvus Mx1201]
gi|505316974|ref|WP_015504076.1| RNA-binding protein, containing S1 domain [Candidatus
Methanomethylophilus alvus]
gi|477554287|gb|AGI84927.1| RNA-binding protein, containing S1 domain [Candidatus
Methanomethylophilus alvus Mx1201]
gi|524837506|emb|CDF31176.1| exosome complex RNA-binding protein Csl4 [Methanoculleus sp.
CAG:1088]
Length = 185
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 25/158 (15%)
Query: 8 IPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIV 67
+PG I ++ + V GTYVR G +Y++ GT+ + +DN+ ++ +V+
Sbjct: 7 LPGDEIA-VEEEYVSSDGTYVRDGKIYASQLGTLVL----DDNESIA---------KVVS 52
Query: 68 PTP------GDVVTARIMAVQQHLCKA-HVISVGN-TALSRTFRALLRRENVRATEIDRI 119
P P GD++ A I ++ + A +++ GN A++ + A L + D +
Sbjct: 53 PNPPNILKEGDIIYATIDDTRKTMATATALVAEGNRRAIASSTDATLHVSKISPDYTDNV 112
Query: 120 EMYKCYRPGDIILARLPLKELHSYQLSTAENELGVVIA 157
R GD+I AR+ + S QL+T + LGVV A
Sbjct: 113 GDE--VRKGDLIRARV-ISTKPSLQLTTKDVHLGVVRA 147
>gi|388580789|gb|EIM21101.1| hypothetical protein WALSEDRAFT_19193 [Wallemia sebi CBS 633.66]
Length = 302
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 10/135 (7%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
S+ + PG+ I S + G GTYV G + S ++G V NK VSV +
Sbjct: 13 FSSSKLTAPGEIIAS-SSAYMHGHGTYVNDGNIISQMSGVVE-----RVNKLVSVRPL-- 64
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE 120
K +P GD+V RI+ VQ K ++ + + L + L R E D ++
Sbjct: 65 --KHKYLPQVGDLVIGRIVEVQAKRWKVNINAASDAVLMLSSINLPGGVQRRKLESDELQ 122
Query: 121 MYKCYRPGDIILARL 135
M + GD+ +A +
Sbjct: 123 MRNFFTEGDLCVAEV 137
>gi|401882864|gb|EJT47105.1| hypothetical protein A1Q1_04179 [Trichosporon asahii var. asahii
CBS 2479]
Length = 211
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 41/162 (25%)
Query: 23 GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQ 82
G G Y QG + +++ G +++ +V+ V + +VP G +V ++
Sbjct: 25 GPGCYESQGRILASIVG--------RPHRDGAVVSVIGKAEAGVVPEIGSIVGYPLL--- 73
Query: 83 QHLCKAHVISVGNTALSR--------TFRALLRRENVRATE--IDRIEMYKCYRPGDIIL 132
+C A NT ++R + + R +TE ++M +C+R GDI+
Sbjct: 74 --VCAAS----SNTQIARLSPQQAHVVIQIVNDRPVADSTEELTGVVKMGECFRLGDIVK 127
Query: 133 AR--------------LPLKELHSYQLSTAENELGVVIALSE 160
A+ L L + SY LSTA NELGVV A SE
Sbjct: 128 AKVVSHALVLFCSSPQLSLGDARSYYLSTAANELGVVYATSE 169
>gi|260940254|ref|XP_002614427.1| hypothetical protein CLUG_05913 [Clavispora lusitaniae ATCC 42720]
gi|238852321|gb|EEQ41785.1| hypothetical protein CLUG_05913 [Clavispora lusitaniae ATCC 42720]
Length = 1373
Score = 42.7 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 9/118 (7%)
Query: 148 AENELGVVIALSE--AASLFRSSEKLTNDIEFLKQEKLKLYEELSSSQKENEILRQTTGD 205
+E EL ++A+ E A L + TN+++ ++Q + L+S+Q+ENE LR
Sbjct: 657 SEQELARILAVKEDIEAKLRQLRASYTNEVKQVEQ----VEANLASAQEENEALRSEASI 712
Query: 206 LEVRLMQMNEVKGEMEFKIKELNKKNQSESKLSDTIRELNEENIGLKQKVELQEAENQ 263
E +L N++ GE+ K + + ++ S L + + +N E L++ +E + AEN+
Sbjct: 713 SEAKL---NQISGELNEKQVAVEELQKTNSALKEKLGYMNAEISELEKSIEAKVAENK 767
>gi|20089605|ref|NP_615680.1| hypothetical protein MA0720 [Methanosarcina acetivorans C2A]
gi|499330273|ref|WP_011020765.1| RNA-binding protein [Methanosarcina acetivorans]
gi|19914524|gb|AAM04160.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
C2A]
Length = 311
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 23 GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPT---PGDVVTARIM 79
G GT V G +YST G V I++ V S K + P GD+V +I
Sbjct: 146 GAGTTVIGGDIYSTATGNVLIDRKS---------RVVSVKPNTLTPNILKVGDIVYGKIT 196
Query: 80 AVQQHLCKAHVISV---GNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILARLP 136
V++ V + N + T + NVR + + R+ +RP DI+ AR
Sbjct: 197 DVRESGAMVEVAGIEGKENREIVNTRPGDIHVSNVRDSYVKRLSDE--FRPSDIVKAR-- 252
Query: 137 LKELHSYQLSTAENELGVVIA 157
+ ++ +L+T+E+ LGVV A
Sbjct: 253 VIDVDRMRLTTSEDSLGVVKA 273
>gi|21227981|ref|NP_633903.1| RNA-binding protein [Methanosarcina mazei Go1]
gi|452210447|ref|YP_007490561.1| RNA-binding protein, containing S1 domain [Methanosarcina mazei
Tuc01]
gi|499344275|ref|WP_011033814.1| RNA-binding protein [Methanosarcina mazei]
gi|20906407|gb|AAM31575.1| putative RNA-binding protein [Methanosarcina mazei Go1]
gi|452100349|gb|AGF97289.1| RNA-binding protein, containing S1 domain [Methanosarcina mazei
Tuc01]
Length = 316
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+PG+ + + + G GT V G +YST G V I++ V S K
Sbjct: 135 FVLPGELVGTTE-EFKSGNGTAVIAGDIYSTATGNVLIDRKA---------RVVSVKPNT 184
Query: 66 IVPT---PGDVVTARIMAVQQHLCKAHVISV---GNTALSRTFRALLRRENVRATEIDRI 119
I P GDVV RI V++ V + N + + +VR + + R
Sbjct: 185 ITPNILKVGDVVYGRISDVRESGAMVEVAGIEGKENREIVSVRTGDIHVSSVRDSYVKR- 243
Query: 120 EMYKCYRPGDIILARLPLKELHSYQLSTAENELGVVIA 157
+ +RP DI+ A+ + ++ +L+TAE+ LGVV A
Sbjct: 244 -LADEFRPSDIVRAK--VVDVERMRLTTAEDSLGVVKA 278
>gi|402216788|gb|EJT96871.1| exosome complex exonuclease rrp4 [Dacryopinax sp. DJM-731 SS1]
Length = 273
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS-YKKEVIV 67
PG+ I + + G GT+V G + ++L+GT+ NK VSV + + Y EV
Sbjct: 5 PGEVITSA-MEFMRGHGTFVEDGSVVASLSGTIE-----RVNKLVSVRALQTRYHGEV-- 56
Query: 68 PTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRP 127
GD+V RI VQ K V S + L + L R E D +EM K +
Sbjct: 57 ---GDLVVGRITEVQAARWKVDVNSHQDAILRLSSVNLPGGVQRRKLESDELEMRKFFEE 113
Query: 128 GDIILARL-PLK-----ELHSYQLSTAENELGVVIALSEAASLFRSSEKLT 172
GD+++A + P+ LH+ L + G +I++S RS+ T
Sbjct: 114 GDLLVAEVQPMHGDGVLSLHTRSLKYGKLRNGQLISVSPVLIRRRSTHFCT 164
>gi|435852343|ref|YP_007313929.1| putative RNA-binding protein (consists of S1 domain and a Zn-ribbon
domain) [Methanomethylovorans hollandica DSM 15978]
gi|505138462|ref|WP_015325564.1| putative RNA-binding protein (consists of S1 domain and a Zn-ribbon
domain) [Methanomethylovorans hollandica]
gi|433662973|gb|AGB50399.1| putative RNA-binding protein (consists of S1 domain and a Zn-ribbon
domain) [Methanomethylovorans hollandica DSM 15978]
Length = 242
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 20/158 (12%)
Query: 10 GQRICQLDSDIVG-------GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYK 62
G+ + + DI+G G GT++ +++ G V I++ + +SV+ + Y
Sbjct: 57 GELVFVMPGDIIGTTEEFIPGIGTFLNVADIHAASTGIVKIDRKA---RMISVVPSTKYP 113
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISV---GNTALSRTFRALLRRENVRATEIDRI 119
V V GD+V I ++++ + + ++ G + A + NV+ + R+
Sbjct: 114 PSVNV---GDIVVGSITSLRESVVLVEIAAIKDEGEREFQKVGIAAIHVSNVKDSYCKRL 170
Query: 120 EMYKCYRPGDIILARLPLKELHSYQLSTAENELGVVIA 157
+ + GDII A++ E + +LSTAE ELGV+ A
Sbjct: 171 DEE--FSVGDIIKAKVLNTE--NMRLSTAEQELGVMKA 204
>gi|212223523|ref|YP_002306759.1| exosome complex RNA-binding protein Csl4 [Thermococcus onnurineus
NA1]
gi|501566896|ref|WP_012571334.1| RNA-binding protein [Thermococcus onnurineus]
gi|212008480|gb|ACJ15862.1| RNA-binding protein [Thermococcus onnurineus NA1]
Length = 195
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 14/177 (7%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
+ N + +PG + ++ + + G G G LY+ AG V I+ D E+S+ V+
Sbjct: 7 VKNGDLVLPGDYLGVIE-EYLPGEGVKEENGELYAIRAGKVRIDP---DRMEISIEPVTD 62
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISV---GNTALSRTFRALLRRENVRATEID 117
+P GDVV A+++ V+ ++ + + ++ + A + VR ++
Sbjct: 63 TPP---LPQIGDVVIAKVIEVKPQAAIVQLVKIEGRNDREIATSKLAGIHVSQVRDGYVE 119
Query: 118 RIEMYKCYRPGDIILARLPLKELHSYQLSTAENELGVVIALSE--AASLFRSSEKLT 172
M ++ GDI+ A++ E QLST +LGV+ AL A L R +L
Sbjct: 120 --SMTNEFKIGDIVRAKVIANEKSPIQLSTKGYDLGVIYALCSRCRAPLVRRGNQLV 174
>gi|340053582|emb|CCC47875.1| putative exosome component CSL4 [Trypanosoma vivax Y486]
Length = 263
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRT------FRALLRRENVRATEIDR 118
V P GD V R++ V ++ +I+V S + FR ++R E++R + R
Sbjct: 114 VFGPRMGDNVHLRVLRVSRYFAYGEIIAVNGCWCSSSAVCTSPFRGVIRVEDIRPFKPGR 173
Query: 119 IEMYK-----CYRPGDIILAR-LPLKELHSYQLSTAENELGVV---IALSEAAS 163
++ ++ GD+++A L ++ YQLST + GV+ +AL EA S
Sbjct: 174 DKLTPPPPSAAFQSGDVVIATVLSQSDVRQYQLSTLSEDCGVIESFVALREAGS 227
>gi|390960480|ref|YP_006424314.1| hypothetical protein containing nucleic acid -binding domain
[Thermococcus sp. CL1]
gi|504601059|ref|WP_014788161.1| RNA-binding protein [Thermococcus sp. CL1]
gi|390518788|gb|AFL94520.1| hypothetical protein containing nucleic acid -binding domain
[Thermococcus sp. CL1]
Length = 196
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 14/155 (9%)
Query: 23 GRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVPTPGDVVTARIMAVQ 82
G G G LY+ AG V I+ +D E+S+ V+ +P GD+V A ++ V+
Sbjct: 28 GEGVKEENGELYAVRAGKVVID---QDRMEISIEPVTDTPP---LPKVGDIVIANVIEVK 81
Query: 83 QHLCKAHVISV----GNTALSRTFRALLRRENVRATEIDRIEMYKCYRPGDIILARLPLK 138
++ + + ++ + A + VR ++ M ++ GD++ AR+
Sbjct: 82 PQAAIVQLVKIEGRDDDREIATSKLAGIHISQVRDGYVE--SMTSEFKVGDVVRARVIAT 139
Query: 139 ELHSYQLSTAENELGVVIALSEAA--SLFRSSEKL 171
E QLST +LGVV AL L R ++L
Sbjct: 140 EKSPIQLSTKGPDLGVVYALCSRCRTPLVRRGDRL 174
>gi|511059089|ref|YP_008070974.1| RNA-binding protein, containing S1 domain [Methanomassiliicoccus
sp. Mx1-Issoire]
gi|521283876|ref|WP_020448144.1| RNA-binding protein, containing S1 domain [Methanomassiliicoccus
sp. Mx1-Issoire]
gi|509091601|gb|AGN25619.1| RNA-binding protein, containing S1 domain [Methanomassiliicoccus
sp. Mx1-Issoire]
Length = 184
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 8 IPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIV 67
+PG + ++ + + GTY +G + +++AG +S+N DN + ++ + E +
Sbjct: 6 LPGDEVAVVE-EYIPAEGTYEHEGIIRASVAGKLSLN----DNDMTATVKPVN---EPNI 57
Query: 68 PTPGDVVTARIMAVQQHLCKAHVI-SVGNT-ALSRTFRALLRRENVRATEIDRIEMYKCY 125
PGD V RI V+ + +I S GN ++ A + + + + + Y
Sbjct: 58 LKPGDNVFCRITDVRASMAVCEIIASDGNDRDITGDKSATIHVSKLSSEYVQDVGNE--Y 115
Query: 126 RPGDIILARLPLKELHSYQLSTAENELGVVIAL 158
RPGD+I A++ L+ S QLST E G + AL
Sbjct: 116 RPGDVIRAKV-LQVKPSVQLSTQEPHYGAIKAL 147
>gi|333988483|ref|YP_004521090.1| RNA-binding protein [Methanobacterium sp. SWAN-1]
gi|503592712|ref|WP_013826788.1| RNA-binding protein [Methanobacterium sp. SWAN-1]
gi|333826627|gb|AEG19289.1| RNA-binding protein [Methanobacterium sp. SWAN-1]
Length = 189
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 8 IPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIV 67
+PG + + + V GTY G + S AGTVS++ NK++S+I +S V
Sbjct: 10 LPGDAL-GVTEEFVPSEGTYEEDGEIRSLTAGTVSMDNK---NKKISIIPKTSSPS---V 62
Query: 68 PTPGDVVTARIMAV--QQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC- 124
G VV +I V Q+ L + I + +L +F + ++ D+ + K
Sbjct: 63 LKNGVVVFGQISEVRGQRALMRLEGIKGKSRSLVTSFSGA-----IHISQADKGYVAKLS 117
Query: 125 --YRPGDIILARLP-LKELHSYQLSTAENELGVVIALSEAASLF 165
+R GD+I AR+ + + + L+TAE+ELGV+ A+ F
Sbjct: 118 DEFRIGDLIEARVTKVMGIDNVDLTTAEDELGVIKAMCTNCRHF 161
>gi|449017378|dbj|BAM80780.1| similar to 3'-5' exoribonuclease CSL4 [Cyanidioschyzon merolae
strain 10D]
Length = 213
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 37/72 (51%)
Query: 62 KKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM 121
K ++P PG V A ++ V + A ++ VG F ++R+++++ D + +
Sbjct: 118 KASALIPRPGKRVIAVVLRVNRRQATALILHVGTVPAKSEFIGVVRQQDIQEDNWDSVRV 177
Query: 122 YKCYRPGDIILA 133
Y +PGD+I A
Sbjct: 178 YDHLQPGDLIAA 189
>gi|156085926|ref|XP_001610372.1| hypothetical protein [Babesia bovis T2Bo]
gi|154797625|gb|EDO06804.1| conserved hypothetical protein [Babesia bovis]
Length = 143
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/90 (20%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 67 VPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYR 126
+P G +V A++ + + ++ + ++ + ++ N+ ++ ++Y+C+
Sbjct: 26 IPAVGAIVIAQVQRISHQQAECCIVCLEGRSIPEGLKGVISLSNIYQSKAIEPKIYECFH 85
Query: 127 PGDIILAR-LPLKELHSYQLSTAENELGVV 155
PGD + A+ + + LSTA+ +LGV+
Sbjct: 86 PGDFVRAKVISTSDTKQLMLSTAQKDLGVI 115
>gi|268324527|emb|CBH38115.1| conserved hypothetical protein [uncultured archaeon]
Length = 187
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
I +PG + + G G Y G +Y+++ G +SI+ VI+V
Sbjct: 7 IVVPGDFL-GTSEEFTPGMGVYDETGNIYASVTGEISISDK-------RVIDVLPKVGTP 58
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVISV---GNTALSRTFRALLRRENVRATEIDRIEMY 122
VP GDVV RI ++ + ++ V G+ ++ + +A++ N+++ + ++
Sbjct: 59 PVPEEGDVVIGRIEDLRDAVAVVNIARVEGKGDREVAASTQAIIHISNIKSGYVSELQRE 118
Query: 123 KCYRPGDIILARLPLKELHSYQLSTAENELGVVIAL 158
Y + L + + + + +LST N+LGV+ A+
Sbjct: 119 FGY----LDLVKAKVLDAKALRLSTEGNDLGVIKAI 150
>gi|91078208|ref|XP_968880.1| PREDICTED: similar to AGAP011211-PA [Tribolium castaneum]
gi|270002359|gb|EEZ98806.1| hypothetical protein TcasGA2_TC001377 [Tribolium castaneum]
Length = 296
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 12/131 (9%)
Query: 4 PPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS-YK 62
P I PGQ I + ++ + G GTY +G+L S++AG + + V N +S+ + S Y
Sbjct: 25 PKIFTPGQVITE-QNEFMRGHGTYEEEGFLKSSVAG---VKEQV--NNLISIRPLKSRYN 78
Query: 63 KEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMY 122
EV GDVV R+ VQQ K S ++ L + L E R + D M
Sbjct: 79 GEV-----GDVVVGRVTEVQQKRWKVDTNSRLDSVLLLSSVNLPGGELRRRSAEDEHMMR 133
Query: 123 KCYRPGDIILA 133
+ + GD+I A
Sbjct: 134 QYLQEGDLISA 144
>gi|341895169|gb|EGT51104.1| hypothetical protein CAEBREN_13458 [Caenorhabditis brenneri]
Length = 303
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTV 41
I IPGQ +C + G GTY+R G + S+L+G V
Sbjct: 31 IVIPGQSVCDAPQQFMRGHGTYIRDGEIVSSLSGVV 66
>gi|505760781|gb|EOR04846.1| Exosome complex component rrp4 [Wallemia ichthyophaga EXF-994]
Length = 327
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 10/125 (8%)
Query: 9 PGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIVP 68
PG I S + G GTYV + S + GTV NK VSV + K +P
Sbjct: 45 PGDVIAS-SSAYMHGHGTYVHNDNIVSNMFGTVE-----RVNKLVSVRPL----KHKYIP 94
Query: 69 TPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKCYRPG 128
GD+V RI+ VQ K + S + L + L R E D ++M + G
Sbjct: 95 QVGDLVIGRIVEVQAKRWKVDIHSSSDAVLMLSSINLPGGVQRRKLESDELQMRNFFTEG 154
Query: 129 DIILA 133
D+ +A
Sbjct: 155 DLCVA 159
>gi|514694007|ref|XP_004994575.1| serine/threonine protein kinase [Salpingoeca sp. ATCC 50818]
gi|326427182|gb|EGD72752.1| serine/threonine protein kinase [Salpingoeca sp. ATCC 50818]
Length = 1132
Score = 40.4 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 157 ALSEAASLFRSSEKLTNDIEFLKQEKLK-LYEELSSSQKENEILRQTTGDLEVRL-MQMN 214
A+ E SL RS+ + + E++K + EE+ Q+ + + Q+ DLE RL Q+
Sbjct: 336 AIDELESL-RSAHADSEQQQTDLTERIKAMKEEMEDLQQAKDDVEQSKADLETRLATQLE 394
Query: 215 EVKGEMEFKIKELNKKNQSESKLSDTIRELNEENIGLKQKVELQEAENQLIQTTKNE 271
+K + E K+K+L + N++ +T+++ NE N Q + AE + +Q E
Sbjct: 395 TLKTQHEQKVKDLGEANEALQTQRNTLQQQNESN---AQALRDARAEIERLQQALQE 448
>gi|308477587|ref|XP_003101007.1| CRE-EXOS-2 protein [Caenorhabditis remanei]
gi|308264351|gb|EFP08304.1| CRE-EXOS-2 protein [Caenorhabditis remanei]
Length = 303
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTV 41
I IPGQ +C + G GTY+R G + S+L+G V
Sbjct: 31 IVIPGQAVCDAPQQFMRGHGTYIRDGEIVSSLSGVV 66
>gi|308454282|ref|XP_003089783.1| hypothetical protein CRE_02717 [Caenorhabditis remanei]
gi|308268796|gb|EFP12749.1| hypothetical protein CRE_02717 [Caenorhabditis remanei]
Length = 273
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTV 41
I IPGQ +C + G GTY+R G + S+L+G V
Sbjct: 1 IVIPGQAVCDAPQQFMRGHGTYIRDGEIVSSLSGVV 36
>gi|336477757|ref|YP_004616898.1| RNA binding protein [Methanosalsum zhilinae DSM 4017]
gi|503665039|ref|WP_013899115.1| RNA-binding protein [Methanosalsum zhilinae]
gi|335931138|gb|AEH61679.1| RNA binding protein [Methanosalsum zhilinae DSM 4017]
Length = 214
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 8 IPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIV 67
+PG I + + G GTY G +Y+ G V +NK ++++SV+ ++S V
Sbjct: 35 LPGDHI-GITEEFASGEGTYSLAGDIYANRTGKVHVNKK---DRKISVVPITSVPP---V 87
Query: 68 PTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRA----LLRRENVRATEIDRIEMYK 123
GD+V I+ V+ + + S+ ++ R F + ++ +V+ + + ++ +
Sbjct: 88 INKGDIVIGEIVNVRDSVAIVSISSIKGSS-EREFMSDDNFVIHISDVKDSYVK--DLSR 144
Query: 124 CYRPGDIILARLPLKELHSYQLSTAENELGVVIA-LSEAASLFRSSEK 170
+ GD++ A++ E +L+T+++ LGV+ + S+ + R +K
Sbjct: 145 EFSLGDVVKAKVIDTE--KMRLTTSDDSLGVMTSRCSKCHGILRMEDK 190
>gi|242398483|ref|YP_002993907.1| RNA-binding protein, containing S1 domain [Thermococcus sibiricus
MM 739]
gi|506329059|ref|WP_015848778.1| RNA-binding protein [Thermococcus sibiricus]
gi|242264876|gb|ACS89558.1| RNA-binding protein, containing S1 domain [Thermococcus sibiricus
MM 739]
Length = 199
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
+ N + +PG + ++ + + G G G LY+ G V I+ + E+SV V+
Sbjct: 9 VENGELVLPGDYLGVIE-EFLPGEGVIEENGELYAARMGRVKIDL---EKIEISVEPVTD 64
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISV----GNTALSRTFRALLRRENVRATEI 116
+P GD+V AR++ V+ ++ + G ++ + A + V+ +
Sbjct: 65 VPP---LPQVGDIVIARVLEVKSQAAIVELLKIEGRKGYREIATSKLAGIHVSQVKDGYV 121
Query: 117 DRIEMYKCYRPGDIILARLPLKELHSYQLSTAENELGVVIALSEAA--SLFRSSEKLT 172
+ M ++ GDI+ A++ QL+T E +LGV+ AL + SL R L
Sbjct: 122 E--SMNSEFKIGDIVRAKVLTNNKSPIQLTTREPDLGVIYALCSSCKVSLVRKGNALV 177
>gi|115727635|ref|XP_789513.2| PREDICTED: exosome complex component RRP4-like [Strongylocentrotus
purpuratus]
Length = 291
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 12/129 (9%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS-YKKE 64
+ PG I DSD + G GTY+ + L +++AG V + NK +SV + + Y E
Sbjct: 23 LVTPGATITA-DSDFMRGHGTYMEEDELIASVAGVVE-----KVNKLISVRPLKTRYNGE 76
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
V GDV+ RI V Q K V S N L + L E + + D ++M +
Sbjct: 77 V-----GDVIVGRIQEVGQKRWKVDVNSRLNAILMLSAVNLPGGELRKRSAEDELKMRQY 131
Query: 125 YRPGDIILA 133
GD+I A
Sbjct: 132 LTEGDLISA 140
>gi|392589653|gb|EIW78983.1| hypothetical protein CONPUDRAFT_59195 [Coniophora puteana
RWD-64-598 SS2]
Length = 300
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 2 SNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS- 60
N I PG+ I D + G GTYV + +++AGT+ NK V+V +S+
Sbjct: 14 GNARITSPGETITS-SQDFMRGHGTYVENEEVIASVAGTIE-----RVNKLVTVRPISTR 67
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIE 120
Y EV GD+V RI VQ K S + L + L R E D ++
Sbjct: 68 YNPEV-----GDLVVGRITEVQPKRWKVDANSRQDAVLMLSSVNLPGGVQRRKLESDELQ 122
Query: 121 MYKCYRPGDIILA 133
M + GD+++A
Sbjct: 123 MRNFFEEGDLLVA 135
>gi|17544090|ref|NP_500978.1| Protein EXOS-2 [Caenorhabditis elegans]
gi|351059307|emb|CCD74150.1| Protein EXOS-2 [Caenorhabditis elegans]
Length = 303
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTV 41
I IPG +C + G GTYVR G + S+L+G V
Sbjct: 31 IVIPGHSVCDAPQQFMRGHGTYVRDGEIVSSLSGVV 66
>gi|513215845|ref|XP_004946622.1| PREDICTED: sperm-associated antigen 5 isoform X7 [Gallus gallus]
Length = 1548
Score = 38.5 bits (88), Expect = 3.3, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 144 QLSTAENELGVVIA--LSEAASLFRSSEKLTNDIEFLKQEKLKLYEELSSSQKENEILRQ 201
QL+ + L ++ + + ASL + + L D E K++ L +E + Q+E L++
Sbjct: 1004 QLAVTNSRLSTDLSTVMKQLASLQQEQDALQQDYEEQKEKMSWLTKERDALQRERRELQE 1063
Query: 202 TTG-----DLEVRL--MQMNEVKGEMEFKIKELNKKNQSESKLSDTIRELNEENIGLKQK 254
D E R+ Q+ EV+ +++ + EL +++ +L + + L EE L ++
Sbjct: 1064 AVECREFLDQENRMSRRQLMEVEAKLQSTLAELQERSLQHEELLEAHQSLQEERAALHKE 1123
Query: 255 VELQEAENQLIQTTKN 270
+E +AE Q +Q ++
Sbjct: 1124 LESTKAELQDLQLKRD 1139
>gi|513215836|ref|XP_004946619.1| PREDICTED: sperm-associated antigen 5 isoform X4 [Gallus gallus]
Length = 1551
Score = 38.5 bits (88), Expect = 3.3, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 144 QLSTAENELGVVIA--LSEAASLFRSSEKLTNDIEFLKQEKLKLYEELSSSQKENEILRQ 201
QL+ + L ++ + + ASL + + L D E K++ L +E + Q+E L++
Sbjct: 1032 QLAVTNSRLSTDLSTVMKQLASLQQEQDALQQDYEEQKEKMSWLTKERDALQRERRELQE 1091
Query: 202 TTG-----DLEVRL--MQMNEVKGEMEFKIKELNKKNQSESKLSDTIRELNEENIGLKQK 254
D E R+ Q+ EV+ +++ + EL +++ +L + + L EE L ++
Sbjct: 1092 AVECREFLDQENRMSRRQLMEVEAKLQSTLAELQERSLQHEELLEAHQSLQEERAALHKE 1151
Query: 255 VELQEAENQLIQTTKN 270
+E +AE Q +Q ++
Sbjct: 1152 LESTKAELQDLQLKRD 1167
>gi|513215833|ref|XP_004946618.1| PREDICTED: sperm-associated antigen 5 isoform X3 [Gallus gallus]
Length = 1570
Score = 38.5 bits (88), Expect = 3.3, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 144 QLSTAENELGVVIA--LSEAASLFRSSEKLTNDIEFLKQEKLKLYEELSSSQKENEILRQ 201
QL+ + L ++ + + ASL + + L D E K++ L +E + Q+E L++
Sbjct: 1032 QLAVTNSRLSTDLSTVMKQLASLQQEQDALQQDYEEQKEKMSWLTKERDALQRERRELQE 1091
Query: 202 TTG-----DLEVRL--MQMNEVKGEMEFKIKELNKKNQSESKLSDTIRELNEENIGLKQK 254
D E R+ Q+ EV+ +++ + EL +++ +L + + L EE L ++
Sbjct: 1092 AVECREFLDQENRMSRRQLMEVEAKLQSTLAELQERSLQHEELLEAHQSLQEERAALHKE 1151
Query: 255 VELQEAENQLIQTTKN 270
+E +AE Q +Q ++
Sbjct: 1152 LESTKAELQDLQLKRD 1167
>gi|513215830|ref|XP_004946617.1| PREDICTED: sperm-associated antigen 5 isoform X2 [Gallus gallus]
Length = 1576
Score = 38.5 bits (88), Expect = 3.3, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 144 QLSTAENELGVVIA--LSEAASLFRSSEKLTNDIEFLKQEKLKLYEELSSSQKENEILRQ 201
QL+ + L ++ + + ASL + + L D E K++ L +E + Q+E L++
Sbjct: 1032 QLAVTNSRLSTDLSTVMKQLASLQQEQDALQQDYEEQKEKMSWLTKERDALQRERRELQE 1091
Query: 202 TTG-----DLEVRL--MQMNEVKGEMEFKIKELNKKNQSESKLSDTIRELNEENIGLKQK 254
D E R+ Q+ EV+ +++ + EL +++ +L + + L EE L ++
Sbjct: 1092 AVECREFLDQENRMSRRQLMEVEAKLQSTLAELQERSLQHEELLEAHQSLQEERAALHKE 1151
Query: 255 VELQEAENQLIQTTKN 270
+E +AE Q +Q ++
Sbjct: 1152 LESTKAELQDLQLKRD 1167
>gi|513215842|ref|XP_004946621.1| PREDICTED: sperm-associated antigen 5 isoform X6 [Gallus gallus]
Length = 1549
Score = 38.5 bits (88), Expect = 3.3, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 144 QLSTAENELGVVIA--LSEAASLFRSSEKLTNDIEFLKQEKLKLYEELSSSQKENEILRQ 201
QL+ + L ++ + + ASL + + L D E K++ L +E + Q+E L++
Sbjct: 1005 QLAVTNSRLSTDLSTVMKQLASLQQEQDALQQDYEEQKEKMSWLTKERDALQRERRELQE 1064
Query: 202 TTG-----DLEVRL--MQMNEVKGEMEFKIKELNKKNQSESKLSDTIRELNEENIGLKQK 254
D E R+ Q+ EV+ +++ + EL +++ +L + + L EE L ++
Sbjct: 1065 AVECREFLDQENRMSRRQLMEVEAKLQSTLAELQERSLQHEELLEAHQSLQEERAALHKE 1124
Query: 255 VELQEAENQLIQTTKN 270
+E +AE Q +Q ++
Sbjct: 1125 LESTKAELQDLQLKRD 1140
>gi|443924181|gb|ELU43245.1| PTPS domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 465
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 212 QMNEVKGEMEFKIKELNKKNQSESKLSDTIRELNEENIGLKQKVELQ 258
Q++E++G+++ K ELN + + +L I ELN+EN L+Q + Q
Sbjct: 342 QISELQGDLDLKTAELNDASYKQQRLESLINELNKENASLRQTLSSQ 388
>gi|513215848|ref|XP_004946623.1| PREDICTED: sperm-associated antigen 5 isoform X8 [Gallus gallus]
Length = 1545
Score = 38.5 bits (88), Expect = 3.5, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 144 QLSTAENELGVVIA--LSEAASLFRSSEKLTNDIEFLKQEKLKLYEELSSSQKENEILRQ 201
QL+ + L ++ + + ASL + + L D E K++ L +E + Q+E L++
Sbjct: 1032 QLAVTNSRLSTDLSTVMKQLASLQQEQDALQQDYEEQKEKMSWLTKERDALQRERRELQE 1091
Query: 202 TTG-----DLEVRL--MQMNEVKGEMEFKIKELNKKNQSESKLSDTIRELNEENIGLKQK 254
D E R+ Q+ EV+ +++ + EL +++ +L + + L EE L ++
Sbjct: 1092 AVECREFLDQENRMSRRQLMEVEAKLQSTLAELQERSLQHEELLEAHQSLQEERAALHKE 1151
Query: 255 VELQEAENQLIQTTKN 270
+E +AE Q +Q ++
Sbjct: 1152 LESTKAELQDLQLKRD 1167
>gi|198417930|ref|XP_002126379.1| PREDICTED: exosome complex component RRP4 [Ciona intestinalis]
Length = 302
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 70/163 (42%), Gaps = 21/163 (12%)
Query: 9 PGQRICQLDSDIVGGRGTYVR---QGYLYSTLAGTVSINKHVEDNKEVSVIEVSS-YKKE 64
PG I + D+D + G GTY LYS++AG V NK + V + S Y E
Sbjct: 28 PGDVITE-DTDYMRGHGTYCTGDADDKLYSSVAGVVE-----RINKLICVRALKSRYTGE 81
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
V GD+V R+ VQQ K S ++ L + L E R + D + M
Sbjct: 82 V-----GDIVVGRVKEVQQKRWKIETNSRLDSILQLSSVNLPGGELRRRSATDELNMRSY 136
Query: 125 YRPGDIILARLP------LKELHSYQLSTAENELGVVIALSEA 161
GD+I A +P + LH+ L + G ++ +S +
Sbjct: 137 LNEGDLISAEVPQVNVDGILSLHTRSLRYGKLSQGCLVIVSPS 179
>gi|513215851|ref|XP_004946624.1| PREDICTED: sperm-associated antigen 5 isoform X9 [Gallus gallus]
Length = 1542
Score = 38.1 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 144 QLSTAENELGVVIA--LSEAASLFRSSEKLTNDIEFLKQEKLKLYEELSSSQKENEILRQ 201
QL+ + L ++ + + ASL + + L D E K++ L +E + Q+E L++
Sbjct: 998 QLAVTNSRLSTDLSTVMKQLASLQQEQDALQQDYEEQKEKMSWLTKERDALQRERRELQE 1057
Query: 202 TTG-----DLEVRL--MQMNEVKGEMEFKIKELNKKNQSESKLSDTIRELNEENIGLKQK 254
D E R+ Q+ EV+ +++ + EL +++ +L + + L EE L ++
Sbjct: 1058 AVECREFLDQENRMSRRQLMEVEAKLQSTLAELQERSLQHEELLEAHQSLQEERAALHKE 1117
Query: 255 VELQEAENQLIQTTKN 270
+E +AE Q +Q ++
Sbjct: 1118 LESTKAELQDLQLKRD 1133
>gi|513215839|ref|XP_004946620.1| PREDICTED: sperm-associated antigen 5 isoform X5 [Gallus gallus]
Length = 1551
Score = 38.1 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 144 QLSTAENELGVVIA--LSEAASLFRSSEKLTNDIEFLKQEKLKLYEELSSSQKENEILRQ 201
QL+ + L ++ + + ASL + + L D E K++ L +E + Q+E L++
Sbjct: 1032 QLAVTNSRLSTDLSTVMKQLASLQQEQDALQQDYEEQKEKMSWLTKERDALQRERRELQE 1091
Query: 202 TTG-----DLEVRL--MQMNEVKGEMEFKIKELNKKNQSESKLSDTIRELNEENIGLKQK 254
D E R+ Q+ EV+ +++ + EL +++ +L + + L EE L ++
Sbjct: 1092 AVECREFLDQENRMSRRQLMEVEAKLQSTLAELQERSLQHEELLEAHQSLQEERAALHKE 1151
Query: 255 VELQEAENQLIQTTKN 270
+E +AE Q +Q ++
Sbjct: 1152 LESTKAELQDLQLKRD 1167
>gi|513215857|ref|XP_004946625.1| PREDICTED: sperm-associated antigen 5 isoform X10 [Gallus gallus]
Length = 1514
Score = 38.1 bits (87), Expect = 4.3, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 144 QLSTAENELGVVIA--LSEAASLFRSSEKLTNDIEFLKQEKLKLYEELSSSQKENEILRQ 201
QL+ + L ++ + + ASL + + L D E K++ L +E + Q+E L++
Sbjct: 970 QLAVTNSRLSTDLSTVMKQLASLQQEQDALQQDYEEQKEKMSWLTKERDALQRERRELQE 1029
Query: 202 TTG-----DLEVRL--MQMNEVKGEMEFKIKELNKKNQSESKLSDTIRELNEENIGLKQK 254
D E R+ Q+ EV+ +++ + EL +++ +L + + L EE L ++
Sbjct: 1030 AVECREFLDQENRMSRRQLMEVEAKLQSTLAELQERSLQHEELLEAHQSLQEERAALHKE 1089
Query: 255 VELQEAENQLIQTTKN 270
+E +AE Q +Q ++
Sbjct: 1090 LESTKAELQDLQLKRD 1105
>gi|513215854|ref|XP_001234950.3| PREDICTED: sperm-associated antigen 5 isoform X1 [Gallus gallus]
Length = 1520
Score = 38.1 bits (87), Expect = 4.5, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 144 QLSTAENELGVVIA--LSEAASLFRSSEKLTNDIEFLKQEKLKLYEELSSSQKENEILRQ 201
QL+ + L ++ + + ASL + + L D E K++ L +E + Q+E L++
Sbjct: 1032 QLAVTNSRLSTDLSTVMKQLASLQQEQDALQQDYEEQKEKMSWLTKERDALQRERRELQE 1091
Query: 202 TTG-----DLEVRL--MQMNEVKGEMEFKIKELNKKNQSESKLSDTIRELNEENIGLKQK 254
D E R+ Q+ EV+ +++ + EL +++ +L + + L EE L ++
Sbjct: 1092 AVECREFLDQENRMSRRQLMEVEAKLQSTLAELQERSLQHEELLEAHQSLQEERAALHKE 1151
Query: 255 VELQEAENQLIQTTKN 270
+E +AE Q +Q ++
Sbjct: 1152 LESTKAELQDLQLKRD 1167
>gi|518005955|ref|WP_019176163.1| hypothetical protein [Methanomassiliicoccus luminyensis]
Length = 179
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 21/157 (13%)
Query: 8 IPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEVIV 67
+PG + + + + GTY G + S+LAG + ++ D ++V+ ++ K ++
Sbjct: 1 MPGDEV-AVAEEYMPAEGTYEHDGKILSSLAGELQLD----DAEKVAKVKA---KNPMVT 52
Query: 68 PTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRI------EM 121
GD V RI V+ + +I G R E I ++ ++
Sbjct: 53 LKNGDSVFCRITDVRASMAICEII--GAEGKDREITG----ETSATIHISKLSSEYVQDV 106
Query: 122 YKCYRPGDIILARLPLKELHSYQLSTAENELGVVIAL 158
+ +RPGD+I A++ ++ S QLST E GV+ AL
Sbjct: 107 GREFRPGDLIRAKV-IQTRPSVQLSTQEPHFGVIKAL 142
>gi|153792053|ref|NP_001012816.2| exosome component 2 [Gallus gallus]
Length = 294
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS-YKKE 64
+ +PG I D+ + G GTYV + L +++AG V NK V V + + Y E
Sbjct: 27 LVVPGDTITT-DTGYMRGHGTYVDEEKLVASVAGAVE-----RVNKLVCVTPLKTRYNGE 80
Query: 65 VIVPTPGDVVTARIMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEMYKC 124
V GD+V RI VQQ K S ++ L + L E R + D + M
Sbjct: 81 V-----GDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDELAMRDY 135
Query: 125 YRPGDIILARL------PLKELHSYQLSTAENELGVVIALSEA 161
+ GD+I A + LH+ L + GV++ +S +
Sbjct: 136 LQEGDLISAEVQSVFSDGAVSLHTRSLKYGKLGQGVLVQVSPS 178
>gi|338719352|ref|XP_001490704.3| PREDICTED: ninein-like protein-like [Equus caballus]
Length = 1042
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 11/117 (9%)
Query: 157 ALSEAASLFRSSEKLTNDIEFLKQEKLKLYEELSSSQKENEILRQTTGDLEVRL---MQM 213
A SEA L S+K +++ LK L+L EE S+ Q +NE +R T L RL
Sbjct: 788 ACSEAEELSTQSQKYKDELSQLKHRILRLGEEASTHQAQNEKIRITIQQLTQRLEEGAHR 847
Query: 214 NEVKG----EMEFKIKELNKKNQS----ESKLSDTIRELNEENIGLKQKVELQEAEN 262
E++G ++E +++ +N++ QS +S+L +T+ E ++ G K+ L +A++
Sbjct: 848 EELQGHQIQKLELELEHVNQECQSLRLLQSQLRETLEESRDQLHGASLKLRLAQAQH 904
>gi|342180938|emb|CCC90415.1| exosome component CSL4 [Trypanosoma congolense IL3000]
Length = 288
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 78 IMAVQQHLCKAHVISVGNTALSRTFRALLRRENVRATEIDRIEM-----YKCYRPGDIIL 132
I+AV C + G+ S FR ++R E++R + R ++ ++ GD+++
Sbjct: 161 IIAVNGTWCSNS--NSGSVGTSSGFRGIIRMEDIRPXKPQRDQLTPPPPAAAFQDGDVVV 218
Query: 133 AR-LPLKELHSYQLSTAENELGVVIAL 158
A L ++ YQLST GVV A+
Sbjct: 219 ATVLSQSDVRQYQLSTVAEHCGVVEAV 245
>gi|290979655|ref|XP_002672549.1| predicted protein [Naegleria gruberi]
gi|284086126|gb|EFC39805.1| predicted protein [Naegleria gruberi]
Length = 1341
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 183 LKLYEELSSS----QKENEILRQTTGDLEVRLMQMNEVKGEMEFKIKELNKKNQSESKLS 238
L +YE + S +KEN+ L++T ++E++L + E K E+E + E N K++ KL+
Sbjct: 1074 LSIYENMRPSMEKVEKENQSLKRTLEEIELKLRKTLEQKDELEKSLAESNDKDEEFKKLT 1133
Query: 239 DTIRELNEENIGLKQKVELQEAE 261
+R+L G ++K EL +E
Sbjct: 1134 QKLRDLE----GFREKYELAMSE 1152
>gi|518095036|ref|WP_019265244.1| RNA-binding protein [Methanobrevibacter smithii]
Length = 190
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 94/218 (43%), Gaps = 34/218 (15%)
Query: 1 MSNPPICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSS 60
+ N +PG ++ ++ ++G +GTY G + S++ G V I+ + I V +
Sbjct: 3 IKNGAFVMPGDKLGIIEQYLLG-KGTYEDNGEIKSSVLGNVQIDSKMR------TITVKA 55
Query: 61 YKKEVIVPTPGDVVTARIMAVQQHLCKAHVISVGNTA--LSRTFRALLRRENVRATEIDR 118
+ + GD V +I ++ ++ + N++ L+ + + ++ +D+
Sbjct: 56 KSGQPALLKIGDTVYGQITDIKTQRANVNIDCLTNSSRPLALPYMGAIHISQAKSGYLDK 115
Query: 119 IEMYKCYRPGDIILARLPLKELHSYQLSTAENELGVVIALSEAASLFRSSEKLTNDIEFL 178
+ +R GDII A++ + L+T + + GV+ A+
Sbjct: 116 LT--DAFRIGDIIKAKVVKITGDNVDLATVDEDCGVLKAMCT------------------ 155
Query: 179 KQEKLKLYEELSSSQKENEILRQTTGDLEVRLMQMNEV 216
+ + ++++QKENE+ +T E R + +N V
Sbjct: 156 -----RCRDYMNTTQKENEVQCRTCNKKEKREVSINYV 188
>gi|154413907|ref|XP_001579982.1| exonuclease [Trichomonas vaginalis G3]
gi|121914195|gb|EAY18996.1| exonuclease, putative [Trichomonas vaginalis G3]
Length = 253
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTVSINKHVEDNKEVSVIEVSSYKKEV 65
+PGQ I + ++ G G + G + +T+ G + I N+ VSV ++S +
Sbjct: 7 FVLPGQVIFENSEGLMPGNGVVLSNGKIIATVRGFIKI-----INQLVSVTPMTS----I 57
Query: 66 IVPTPGDVVTARIMAVQQHLCKAHVIS--VGNTALSRTFRALLRRENVRATEIDRIEMYK 123
P GD+V RI ++Q+ + + + + + LS F L E R T D M +
Sbjct: 58 YSPNVGDIVVGRIESIQKQRWRVQIGAAVLADLRLSSIF--LPDGELRRRTTTDERNMRQ 115
Query: 124 CYRPGDIILA 133
+ GD+I A
Sbjct: 116 YFDVGDLICA 125
>gi|268536880|ref|XP_002633575.1| C. briggsae CBR-EXOS-2 protein [Caenorhabditis briggsae]
Length = 303
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 6 ICIPGQRICQLDSDIVGGRGTYVRQGYLYSTLAGTV 41
I IPG +C + G GT++R G + S+L+G V
Sbjct: 31 IVIPGHSVCDAPQQFMRGHGTFIRDGEIVSSLSGVV 66
Database: nr
Posted date: Jul 29, 2013 4:40 PM
Number of letters in database: 999,999,530
Number of sequences in database: 2,912,337
Database: /usr2/db/fasta/nr.01
Posted date: Jul 29, 2013 4:44 PM
Number of letters in database: 999,999,206
Number of sequences in database: 2,915,278
Database: /usr2/db/fasta/nr.02
Posted date: Jul 29, 2013 4:48 PM
Number of letters in database: 999,999,473
Number of sequences in database: 3,020,847
Database: /usr2/db/fasta/nr.03
Posted date: Jul 29, 2013 4:52 PM
Number of letters in database: 999,999,754
Number of sequences in database: 2,810,471
Database: /usr2/db/fasta/nr.04
Posted date: Jul 29, 2013 4:55 PM
Number of letters in database: 999,999,790
Number of sequences in database: 2,820,602
Database: /usr2/db/fasta/nr.05
Posted date: Jul 29, 2013 4:59 PM
Number of letters in database: 999,999,923
Number of sequences in database: 2,959,627
Database: /usr2/db/fasta/nr.06
Posted date: Jul 29, 2013 5:03 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,952,296
Database: /usr2/db/fasta/nr.07
Posted date: Jul 29, 2013 5:07 PM
Number of letters in database: 999,999,984
Number of sequences in database: 2,915,919
Database: /usr2/db/fasta/nr.08
Posted date: Jul 29, 2013 5:10 PM
Number of letters in database: 999,999,939
Number of sequences in database: 2,659,462
Database: /usr2/db/fasta/nr.09
Posted date: Jul 29, 2013 5:13 PM
Number of letters in database: 999,999,159
Number of sequences in database: 2,912,643
Database: /usr2/db/fasta/nr.10
Posted date: Jul 29, 2013 5:15 PM
Number of letters in database: 788,892,548
Number of sequences in database: 2,364,762
Lambda K H
0.313 0.130 0.347
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,890,666,171
Number of Sequences: 31244244
Number of extensions: 183020352
Number of successful extensions: 853011
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 7252
Number of HSP's that attempted gapping in prelim test: 823605
Number of HSP's gapped (non-prelim): 35134
length of query: 271
length of database: 10,788,889,170
effective HSP length: 142
effective length of query: 129
effective length of database: 10,647,173,818
effective search space: 1373485422522
effective search space used: 1373485422522
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 76 (33.9 bits)