RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6283
(1030 letters)
>d1tgoa2 e.8.1.1 (A:348-773) Family B DNA polymerase {Archaeon
Thermococcus gorgonarius [TaxId: 71997]}
Length = 426
Score = 162 bits (411), Expect = 1e-43
Identities = 101/380 (26%), Positives = 172/380 (45%), Gaps = 35/380 (9%)
Query: 448 RSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKG 507
E+ LL +E++ + P+K + R++ +Y+GG V EP++G
Sbjct: 2 TGNLVEWFLLRKAYERNELAPNKPDEREL-------------ARRRESYAGGYVKEPERG 48
Query: 508 FYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEI 567
++ I+ +DF SLYPSII +N+ T+ ++ D+ + G +PS +
Sbjct: 49 LWEN-IVYLDFRSLYPSIIITHNVSPDTLNREGCEEYDVAPQVGHKFCKDFP-GFIPSLL 106
Query: 568 KKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAAL 627
L+E R++VK MK D RQ+A+K+ ANS YG G+ +R++ + A
Sbjct: 107 GDLLEERQKVKKKMKATI-DPIEKKLLDYRQRAIKILANSFYGYYGYAKARWYCKECAES 165
Query: 628 VTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNK-LY 685
VTA GR+ + T +E ++V+Y DTD + D ++V K + N L
Sbjct: 166 VTAWGRQYIETTIREIEEKFGFKVLYADTDGFFATIPGADAETVKKKAKEFLDYINAKLP 225
Query: 686 KQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGK 745
LEL+ +G YK + KKKYA +G+++VRRDWS++A E
Sbjct: 226 GLLELEYEGFYKRGFFVTKKKYAV--------IDEEDKITTRGLEIVRRDWSEIAKETQA 277
Query: 746 FVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEGGKV 805
V+ IL ++ +K++ L VP L I +Q+T+ + K
Sbjct: 278 RVLEAILK---------HGDVEEAVRIVKEVTEKLSKYEVPPEKLVIYEQITRDLKDYKA 328
Query: 806 CITQIRLSRNRRGRRRRRRK 825
+ +++ R + R
Sbjct: 329 TGPHVAVAKRLAARGIKIRP 348
>d1s5ja2 e.8.1.1 (A:450-864) Family B DNA polymerase {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 415
Score = 157 bits (398), Expect = 4e-42
Identities = 90/384 (23%), Positives = 156/384 (40%), Gaps = 29/384 (7%)
Query: 455 LLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFII 514
L ++++++P K+ K T KGKG Y G +V++P G + I
Sbjct: 9 LYYWEHRKRNWLIPLKEEILAKSSNIRTSALIKGKG-----YKGAVVIDPPAGIFFN-IT 62
Query: 515 LMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDT---GILPSEIKKLV 571
++DF SLYPSII+ +N+ + T+ ++ + H V GI L
Sbjct: 63 VLDFASLYPSIIRTWNLSYETVDIQQCKKPYEVKDETGEVLHIVCMDRPGITAVITGLLR 122
Query: 572 ESR-RQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTA 630
+ R + K K PN S + + YD+ Q+A+K+ N+ YG G +A +A VTA
Sbjct: 123 DFRVKIYKKKAKNPNNSEEQKLLYDVVQRAMKVFINATYGVFGAETFPLYAPRVAESVTA 182
Query: 631 KGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLEL 690
GR ++ +T V+YGDTDSL + +S+ I +K+ L+L
Sbjct: 183 LGRYVITSTVKKAREEGLTVLYGDTDSLFLLN--PPKNSLENIIKWVKTTF-----NLDL 235
Query: 691 DIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQ 750
++D YK++ KK +IKG+ V +R+ + + V
Sbjct: 236 EVDKTYKFVAFSGLKKNYFGVY-------QDGKVDIKGMLVKKRNTPEFVKKVFNEVKEL 288
Query: 751 ILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEG-GKVCITQ 809
++ S D + + I + +K L N L L L+K + K
Sbjct: 289 MISINSPNDV--KEIKRKIVDVVKGSYEKLKNKGYNLDELAFKVMLSKPLDAYKKNTPQH 346
Query: 810 IRLSRNRRGRRRRRRKKKEEKKKW 833
++ + + R + +
Sbjct: 347 VKAA--LQLRPFGVNVLPRDIIYY 368
>d1q8ia2 e.8.1.1 (A:390-783) Family B DNA polymerase {Escherichia
coli [TaxId: 562]}
Length = 394
Score = 140 bits (353), Expect = 2e-36
Identities = 80/358 (22%), Positives = 146/358 (40%), Gaps = 38/358 (10%)
Query: 486 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSD 545
N G+ A GG V++ + G YD ++++D+ SLYPSI++ + I + M Q
Sbjct: 1 NLGE-VPPHASPGGYVMDSRPGLYDS-VLVLDYKSLYPSIVRTFLIDPVGLVEGMAQPDP 58
Query: 546 ITTLCEYLPEH-QVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 604
+ +L + LP + + R + K +P +ALK+
Sbjct: 59 EHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPL------------SQALKII 106
Query: 605 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC-N 663
N+ YG LG RFF LA+ +T +G +I+ TK+L+E Y+VIYGDTDS +
Sbjct: 107 MNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKG 166
Query: 664 VNDYDSVFKIGNQIKSECN----------KLYKQLELDIDGVYKYMLLLKKKKYAALSIS 713
+ + KIG + N +L LEL+ + + L+ + S
Sbjct: 167 AHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKK 226
Query: 714 KLSNGK---MICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIH 770
+ + KG++ VR DW+ LA + + + +I + Y + ++
Sbjct: 227 RYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPY-----QEYVRETI 281
Query: 771 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEGGKVCITQIRLSRNRRGRRRRRRKKKE 828
+ + D + + + L++ + RL+ +R R + +
Sbjct: 282 DKLMAGELDARLVYRK----RLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQN 335
>d1ih7a2 e.8.1.1 (A:376-903) Family B DNA polymerase {Bacteriophage
RB69 [TaxId: 12353]}
Length = 528
Score = 96.2 bits (238), Expect = 4e-21
Identities = 66/377 (17%), Positives = 107/377 (28%), Gaps = 110/377 (29%)
Query: 487 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI 546
+G+ Y G V EP Y +++ D SLYPSII++ NI TI + + +
Sbjct: 7 QGRSHPVQPYPGAFVKEPIPNRYK-YVMSFDLTSLYPSIIRQVNISPETI-AGTFKVAPL 64
Query: 547 TTLCEYLPEHQVDT---------------GILPSEIKKLVESRRQVKALM---------- 581
+ E D G++P+EI K+ R++ K M
Sbjct: 65 HDYINAVAERPSDVYSCSPNGMMYYKDRDGVVPTEITKVFNQRKEHKGYMLAAQRNGEII 124
Query: 582 ----------------------------------------KQPNLSSDLLMQYDIRQKAL 601
+ + + Q
Sbjct: 125 KEALHNPNLSVDEPLDVDYRFDFSDEIKEKIKKLSAKSLNEMLFRAQRTEVAGMTAQINR 184
Query: 602 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYE---------VIY 652
KL NS+YG LG R++ A +T G+ L + V E V+Y
Sbjct: 185 KLLINSLYGALGNVWFRYYDLRNATAITTFGQMALQWIERKVNEYLNEVCGTEGEAFVLY 244
Query: 653 GDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDI-------------------- 692
GDTDS+ +S + + L K +
Sbjct: 245 GDTDSIYVSADKIIDKVGESKFRDTNHWVDFLDKFARERMEPAIDRGFREMCEYMNNKQH 304
Query: 693 --------------DGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQ 738
KK+YA +I G++ + +
Sbjct: 305 LMFMDREAIAGPPLGSKGIGGFWTGKKRYALNVWDMEGTRYAEPKLKIMGLETQKSSTPK 364
Query: 739 LASEAGKFVISQILDEQ 755
+A K I ++L E
Sbjct: 365 AVQKALKECIRRMLQEG 381
>d2es4d1 a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB)
{Burkholderia glumae [TaxId: 337]}
Length = 280
Score = 61.2 bits (148), Expect = 1e-10
Identities = 14/185 (7%), Positives = 55/185 (29%), Gaps = 18/185 (9%)
Query: 840 RRRRRGKKEEEKKKKKEEEEEGGEKEEEEGGGGGGRRRRRRRRSGKEEEEKKKKEGGGGR 899
+ ++ + E E +E+ R+R R + E
Sbjct: 106 MQLALDQRAALADRTLGEWAEPFFGDEQR------RQRHDLERIRIANDTTLSPE----- 154
Query: 900 RRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKEE 959
++ R ++ R ++ ++ + ++ + R + +
Sbjct: 155 QKAARLAALDAQLTPDERAQQAALHAQQDAVTKIADLQKAGATPDQMRAQIAQTL---GP 211
Query: 960 EEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEE 1019
E + + ++ +E + + + +++ + ++ + + +++
Sbjct: 212 EAAARAAQMQQDDEAWQTRYQ----AYAAERDRIAAQGLAPQDRDARIAQLRQQTFTAPG 267
Query: 1020 EKKRR 1024
E R
Sbjct: 268 EAIRA 272
Score = 61.2 bits (148), Expect = 1e-10
Identities = 11/160 (6%), Positives = 48/160 (30%), Gaps = 4/160 (2%)
Query: 875 RRRRRRRRSGKEEEEKKKKEGGGGRRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRR 934
+R R+ E E + +R + R + S ++ R +
Sbjct: 112 QRAALADRTLGEWAEPFFGDEQRRQRHDLERIRIANDTTLSPEQKAARLAALDAQLTPDE 171
Query: 935 RRRRRRRRRRRRRRRRRRRRSGKEEEEEEKKKEEKKKEEEEKKKKEGKTKKEE----KKK 990
R ++ ++ + ++ + + + E + + ++++ +
Sbjct: 172 RAQQAALHAQQDAVTKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQMQQDDEAWQTRY 231
Query: 991 EEEEEKKKKKKEEEKEEEEKKEEEEKEEEEKKRRRIRRKR 1030
+ ++ + + +++ + ++ R
Sbjct: 232 QAYAAERDRIAAQGLAPQDRDARIAQLRQQTFTAPGEAIR 271
Score = 52.7 bits (126), Expect = 6e-08
Identities = 18/205 (8%), Positives = 61/205 (29%), Gaps = 16/205 (7%)
Query: 794 KQLTKAPEGGKVCITQIRLSRNRRGRRRRRRKKKEEKKKWKRRGGGRRRRRGKKEEEKKK 853
L + P G V ++ + + +R +W G +RR + + E+ +
Sbjct: 85 DALAQLPGDGAVLGDKLDPAAMQLALDQRAALADRTLGEWAEPFFGDEQRRQRHDLERIR 144
Query: 854 KKEEEEEGGEKEEEEGGGGGGRRRRRRRRSGKEEEEKKKKEGGGGRRRRRRKKRRRSRRR 913
+ E++ R + +E+ ++ ++ +
Sbjct: 145 IANDTTL---SPEQK------AARLAALDAQLTPDERAQQA----ALHAQQDAVTKIADL 191
Query: 914 RSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKEEEEEEKKKEEKKKEE 973
+ + R + + R + ++ + R + E + +
Sbjct: 192 QKAGATPDQMRAQIAQTLGPEAAARAAQMQQDDEAWQTRYQ---AYAAERDRIAAQGLAP 248
Query: 974 EEKKKKEGKTKKEEKKKEEEEEKKK 998
+++ + + +++ E +
Sbjct: 249 QDRDARIAQLRQQTFTAPGEAIRAA 273
Score = 48.1 bits (114), Expect = 2e-06
Identities = 18/147 (12%), Positives = 40/147 (27%), Gaps = 4/147 (2%)
Query: 811 RLSRNRRGRRRRRRKKKEEKKKWKRRGGGRRRRRGKKEEEKKKKKEEEEEGGEKEEEEGG 870
R R E+K + E ++ +++ K +
Sbjct: 137 RHDLERIRIANDTTLSPEQKAARLAA---LDAQLTPDERAQQAALHAQQDAVTKIADLQK 193
Query: 871 GGGGRRRRRRRRSGKEEEEKKKKEGGGGRRRRRRKKRRRS-RRRRSRRRRRRRRRRRRRR 929
G + R + + E + + + R ++ R R + + R
Sbjct: 194 AGATPDQMRAQIAQTLGPEAAARAAQMQQDDEAWQTRYQAYAAERDRIAAQGLAPQDRDA 253
Query: 930 RRRRRRRRRRRRRRRRRRRRRRRRRSG 956
R + R++ R R +G
Sbjct: 254 RIAQLRQQTFTAPGEAIRAASLDRGAG 280
>d2py5a2 e.8.1.1 (A:188-575) phi29 DNA polymerase {Bacteriophage
phi-29 [TaxId: 10756]}
Length = 388
Score = 61.8 bits (149), Expect = 2e-10
Identities = 45/347 (12%), Positives = 94/347 (27%), Gaps = 96/347 (27%)
Query: 493 KAAYSGGLV--LEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 550
+ AY GG + K ++ D NSLYP+ + + + V +
Sbjct: 36 RYAYRGGFTWLNDRFKEKEIGEGMVFDVNSLYPAQMYSRLLPYGEPIVFEGKYVWDEDYP 95
Query: 551 EYL---------------------------------PEHQVDTGILPSEIKKLVESRRQV 577
++ ++ L + +L++ +
Sbjct: 96 LHIQHIRCEFELKEGYIPTIQIKRSRFYKGNEYLKSSGGEIADLWLSNVDLELMKEHYDL 155
Query: 578 KALM--------KQPNLSSDLL--------MQYDIRQKALKLTANSMYGCLGFPNS---- 617
+ L D + ++ KL NS+YG
Sbjct: 156 YNVEYISGLKFKATTGLFKDFIDKWTYIKTTSEGAIKQLAKLMLNSLYGKFASNPDVTGK 215
Query: 618 --------------------RFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 657
P+ +TA R + + +IY DTDS
Sbjct: 216 VPYLKENGALGFRLGEEETKDPVYTPMGVFITAWARYTTITAA---QACYDRIIYCDTDS 272
Query: 658 LMISCN-VNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 716
+ ++ + D ++ + +K L++K Y K
Sbjct: 273 IHLTGTEIPDVIKDIVDPKKL----------GYWAHESTFKRAKYLRQKTYIQDIYMKEV 322
Query: 717 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 763
+GK++ E D +S + +I E ++ ++ +
Sbjct: 323 DGKLV---EGSPDDYTDIKFSVKC----AGMTDKIKKEVTFENFKVG 362
>d1q8ia1 c.55.3.5 (A:2-389) Exonuclease domain of family B DNA
polymerases {Escherichia coli [TaxId: 562]}
Length = 388
Score = 58.5 bits (141), Expect = 2e-09
Identities = 12/65 (18%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Query: 404 EFIKFTMLHSSYIIKIMCELNVLPLAIQITNVCGNVLSRTLMGGRSERNEFLLLHAFHEK 463
+ + + +I + ++P ++ V G + R GG L H
Sbjct: 326 ALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDRH--GGSVAAFGHLYFPRMHRA 383
Query: 464 SYVLP 468
YV P
Sbjct: 384 GYVAP 388
>d1sa0e_ a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 138
Score = 51.4 bits (123), Expect = 3e-08
Identities = 20/107 (18%), Positives = 42/107 (39%)
Query: 924 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKEEEEEEKKKEEKKKEEEEKKKKEGKT 983
RRR +++ RR +E E + E+++ E E +K +
Sbjct: 28 GVPEFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEEN 87
Query: 984 KKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEEEKKRRRIRRKR 1030
K +E+ +K + +E +E E +E++K +R+ +
Sbjct: 88 NNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNK 134
Score = 51.0 bits (122), Expect = 4e-08
Identities = 24/101 (23%), Positives = 41/101 (40%)
Query: 922 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKEEEEEEKKKEEKKKEEEEKKKKEG 981
RRR +++ RR+ + + +E E E +K ++ K KE
Sbjct: 38 RRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEK 97
Query: 982 KTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEEEKK 1022
+K E KE E E +E+++ EE K +E K+
Sbjct: 98 LAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKE 138
Score = 49.1 bits (117), Expect = 2e-07
Identities = 21/113 (18%), Positives = 43/113 (38%)
Query: 910 SRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKEEEEEEKKKEEK 969
S RRR +++ RR+ + + + K E E E ++
Sbjct: 25 SFDGVPEFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAI 84
Query: 970 KKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEEEKK 1022
++ K + K ++ + +E E E +E++K EE ++ +E K
Sbjct: 85 EENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELK 137
Score = 47.2 bits (112), Expect = 8e-07
Identities = 17/113 (15%), Positives = 45/113 (39%)
Query: 905 KKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKEEEEEEK 964
RRR +++ RR+ + + +R + ++ +
Sbjct: 26 FDGVPEFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIE 85
Query: 965 KKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKE 1017
+ K +EK ++ ++ KE ++ ++ +++++ EE +K +E KE
Sbjct: 86 ENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKE 138
Score = 42.6 bits (100), Expect = 3e-05
Identities = 14/91 (15%), Positives = 36/91 (39%)
Query: 899 RRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKE 958
+++ + RR + + +R R ++ + + + ++ S KE
Sbjct: 48 QKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKE 107
Query: 959 EEEEEKKKEEKKKEEEEKKKKEGKTKKEEKK 989
E ++ +E++K +E + KE K+
Sbjct: 108 NREAHLAAMLERLQEKDKHAEEVRKNKELKE 138
Score = 37.6 bits (87), Expect = 0.002
Identities = 16/101 (15%), Positives = 40/101 (39%), Gaps = 3/101 (2%)
Query: 879 RRRRSGKEEEEKKKKEGGGGRRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRR 938
RRR EE +KK + R+ + + + +R R ++ + + +
Sbjct: 38 RRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEK 97
Query: 939 RRRRRRRRRRRRRRRRSGKEE---EEEEKKKEEKKKEEEEK 976
++ + R + E E+++ +E +K +E ++
Sbjct: 98 LAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKE 138
Score = 28.7 bits (64), Expect = 1.6
Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 5/105 (4%)
Query: 820 RRRRRKKKEEKKKWKRRGGGRRRRRGKKEEEKKKKKEEEEEGGEKEEEEGGGGGGRRRRR 879
RRR +E +KK + R+ + + + +K+E E E +K EE +
Sbjct: 38 RRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEE-----NNNFIK 92
Query: 880 RRRSGKEEEEKKKKEGGGGRRRRRRKKRRRSRRRRSRRRRRRRRR 924
+ ++ + KE ++ + + R+ + +
Sbjct: 93 MAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELK 137
Score = 27.5 bits (61), Expect = 5.1
Identities = 10/70 (14%), Positives = 26/70 (37%)
Query: 961 EEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEEE 1020
+ +++ + ++K + EE +K ++ E K EK+E E + ++
Sbjct: 23 PPSFDGVPEFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQK 82
Query: 1021 KKRRRIRRKR 1030
+
Sbjct: 83 AIEENNNFIK 92
Score = 27.2 bits (60), Expect = 6.7
Identities = 11/81 (13%), Positives = 26/81 (32%)
Query: 814 RNRRGRRRRRRKKKEEKKKWKRRGGGRRRRRGKKEEEKKKKKEEEEEGGEKEEEEGGGGG 873
+ RR+ ++ E K + R K EE + +E ++ E
Sbjct: 50 KLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENR 109
Query: 874 GRRRRRRRRSGKEEEEKKKKE 894
+E+++ ++
Sbjct: 110 EAHLAAMLERLQEKDKHAEEV 130
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding
protein 1 (GBP1), C-terminal domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 300
Score = 52.4 bits (125), Expect = 1e-07
Identities = 14/152 (9%), Positives = 61/152 (40%)
Query: 873 GGRRRRRRRRSGKEEEEKKKKEGGGGRRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRR 932
GG R ++ +++ ++ G + + + + + +
Sbjct: 148 GGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIE 207
Query: 933 RRRRRRRRRRRRRRRRRRRRRRSGKEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEE 992
R + + + +R++ + E++E+ +E K+ EK + + +E+++
Sbjct: 208 VERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTL 267
Query: 993 EEEKKKKKKEEEKEEEEKKEEEEKEEEEKKRR 1024
+ +++++ ++ +++ + E ++ + +
Sbjct: 268 ALKLQEQEQLLKEGFQKESRIMKNEIQDLQTK 299
Score = 51.3 bits (122), Expect = 3e-07
Identities = 25/214 (11%), Positives = 78/214 (36%), Gaps = 4/214 (1%)
Query: 821 RRRRKKKEEKKKWKRRGGGRRRRRGKKEEEKKKKKEEEEEGGEKEEEEGGGGGGRRRRRR 880
R ++E + + R +KE + +K+ ++ + +E G +
Sbjct: 73 LHRDSEREAIEVFIRSSFKDVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCSGLLQVIF 132
Query: 881 RRSGKEEEEKKKKEGGGGRRRRRRKKRRRSRRRRSRRRRRR----RRRRRRRRRRRRRRR 936
+E + + GG R ++ + + + R+ + + + +
Sbjct: 133 SPLEEEVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAI 192
Query: 937 RRRRRRRRRRRRRRRRRRSGKEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEK 996
+ + + + R E + K + + + E+ ++ + +E K+ E+
Sbjct: 193 LQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKM 252
Query: 997 KKKKKEEEKEEEEKKEEEEKEEEEKKRRRIRRKR 1030
+ + + KE+E + +E+E+ + +++
Sbjct: 253 ENDRVQLLKEQERTLALKLQEQEQLLKEGFQKES 286
Score = 47.0 bits (111), Expect = 5e-06
Identities = 22/153 (14%), Positives = 60/153 (39%), Gaps = 8/153 (5%)
Query: 846 KKEEEKKKKKEEEEEGGEKEEEEGGGGGGRRRRRRRRSGKEEEEKKKKEGGGGRRRRRRK 905
+K ++ KKK EE G + EE + +S + + + + +
Sbjct: 155 QKLQDLKKKYYEEPRKGIQAEEI--------LQTYLKSKESMTDAILQTDQTLTEKEKEI 206
Query: 906 KRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKEEEEEEKK 965
+ R + ++ + +R+ + ++ R + ++ + + +E+E+
Sbjct: 207 EVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERT 266
Query: 966 KEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKK 998
K +E+E+ K+ + + K E ++ + K
Sbjct: 267 LALKLQEQEQLLKEGFQKESRIMKNEIQDLQTK 299
Score = 38.6 bits (89), Expect = 0.003
Identities = 14/161 (8%), Positives = 51/161 (31%)
Query: 807 ITQIRLSRNRRGRRRRRRKKKEEKKKWKRRGGGRRRRRGKKEEEKKKKKEEEEEGGEKEE 866
+ S+ R ++ + +KK ++ G + + K K+ + +
Sbjct: 139 VKAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQT 198
Query: 867 EEGGGGGGRRRRRRRRSGKEEEEKKKKEGGGGRRRRRRKKRRRSRRRRSRRRRRRRRRRR 926
R + S + + + + +K+R + + R +
Sbjct: 199 LTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQ 258
Query: 927 RRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKEEEEEEKKKE 967
+ + R + + + + + ++ + E ++ + +
Sbjct: 259 LLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTK 299
Score = 37.4 bits (86), Expect = 0.007
Identities = 16/185 (8%), Positives = 62/185 (33%)
Query: 846 KKEEEKKKKKEEEEEGGEKEEEEGGGGGGRRRRRRRRSGKEEEEKKKKEGGGGRRRRRRK 905
++ + + E E ++ + K+ ++ K+ R
Sbjct: 68 QELLDLHRDSEREAIEVFIRSSFKDVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCSGL 127
Query: 906 KRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKEEEEEEKK 965
+ + + R ++ + +++ R+ + + + ++
Sbjct: 128 LQVIFSPLEEEVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKES 187
Query: 966 KEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEEEKKRRR 1025
+ + ++ ++ K + E+ K E + K E + + E+ E+++ ++ ++
Sbjct: 188 MTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQ 247
Query: 1026 IRRKR 1030
+ K
Sbjct: 248 LTEKM 252
>d1xu6a_ g.16.3.1 (A:) Variant surface glycoprotein MITAT 1.2, VSG
221, C-terminal domain {Trypanosoma brucei brucei [TaxId:
5702]}
Length = 80
Score = 36.5 bits (84), Expect = 0.001
Identities = 10/66 (15%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 957 KEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEK 1016
++ + + +++ E E K+ + + + K + + KK ++EE K+ ++
Sbjct: 8 LTQKHKPAESQQQAAETEGSCNKKDQNECKSPCKWHNDAENKKCT---LDKEEAKKVADE 64
Query: 1017 EEEEKK 1022
++ K
Sbjct: 65 TAKDGK 70
Score = 30.7 bits (69), Expect = 0.14
Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Query: 955 SGKEEEEEEKKKEEKK-----KEEEEKKKKEGKTKKEEKKKEEEEEKKKKK 1000
E E KK++ + K + + K+ KEE KK +E K K
Sbjct: 20 QAAETEGSCNKKDQNECKSPCKWHNDAENKKCTLDKEEAKKVADETAKDGK 70
Score = 26.1 bits (57), Expect = 7.3
Identities = 7/37 (18%), Positives = 15/37 (40%)
Query: 954 RSGKEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKK 990
+S + + + K+ +EE KK + K +
Sbjct: 37 KSPCKWHNDAENKKCTLDKEEAKKVADETAKDGKTGN 73
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse
gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 248
Score = 37.4 bits (86), Expect = 0.005
Identities = 16/142 (11%), Positives = 41/142 (28%), Gaps = 11/142 (7%)
Query: 899 RRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKE 958
+ + + R R R R ++ + R + +
Sbjct: 107 TIEDIDSLSPQMVKLLAYLYRNVDEIERLLPAVERHIDEVREILKKVMGKERPQAKDVVV 166
Query: 959 EEEE----------EKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEE 1008
E E + + K +++ + ++ K + E +
Sbjct: 167 REGEVIFPDLRTYIQGSGRTSRLFAGGLTKGASFLLEDDSELLSAFIERAKLYDIEFKSI 226
Query: 1009 EKKE-EEEKEEEEKKRRRIRRK 1029
++ + E+ E ++ R R RR+
Sbjct: 227 DEVDFEKLSRELDESRDRYRRR 248
Score = 31.7 bits (71), Expect = 0.42
Identities = 18/140 (12%), Positives = 44/140 (31%), Gaps = 4/140 (2%)
Query: 867 EEGGGGGGRRRRRRRRSGKEEEEKKKKEGGGGRR----RRRRKKRRRSRRRRSRRRRRRR 922
E+ + + + +E ++ R R KK R +++ R
Sbjct: 109 EDIDSLSPQMVKLLAYLYRNVDEIERLLPAVERHIDEVREILKKVMGKERPQAKDVVVRE 168
Query: 923 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKEEEEEEKKKEEKKKEEEEKKKKEGK 982
R + R R + +++ E E+ K + + K +
Sbjct: 169 GEVIFPDLRTYIQGSGRTSRLFAGGLTKGASFLLEDDSELLSAFIERAKLYDIEFKSIDE 228
Query: 983 TKKEEKKKEEEEEKKKKKKE 1002
E+ +E +E + + ++
Sbjct: 229 VDFEKLSRELDESRDRYRRR 248
>d1bjta_ e.11.1.1 (A:) DNA topoisomerase II, C-terminal fragment
(residues 410-1202) {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 760
Score = 36.7 bits (84), Expect = 0.016
Identities = 7/52 (13%), Positives = 26/52 (50%)
Query: 959 EEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEK 1010
+E +K ++K+++E E + + K+ + + + ++ +++ E +
Sbjct: 708 KERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDAEAR 759
Score = 31.7 bits (71), Expect = 0.56
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 9/56 (16%)
Query: 971 KEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEE-----EEKKEEEEKEEEEK 1021
KE +K K+ K+EK+ E E K K+ + +E +++ E +
Sbjct: 708 KERYQKLLKQ----KQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDAEAR 759
Score = 31.3 bits (70), Expect = 0.74
Identities = 10/62 (16%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 950 RRRRRSGKEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEE 1009
R + + ++ K+K+EK+ E E K ++ + + + +E + + E
Sbjct: 702 RIWSLTKERYQKLLKQKQEKETELENLLK----LSAKDIWNTDLKAFEVGYQEFLQRDAE 757
Query: 1010 KK 1011
+
Sbjct: 758 AR 759
Score = 30.2 bits (67), Expect = 1.7
Identities = 11/52 (21%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 966 KEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKK-EEEKEEEEKKEEEEK 1016
KE +K ++K++KE + + K ++ K E +E +++ E +
Sbjct: 708 KERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDAEAR 759
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 33.0 bits (75), Expect = 0.070
Identities = 11/56 (19%), Positives = 30/56 (53%)
Query: 957 KEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKE 1012
KE +E K K+++ + + G ++E ++++E K ++++ E ++E +
Sbjct: 80 KEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWLQ 135
Score = 31.8 bits (72), Expect = 0.14
Identities = 10/56 (17%), Positives = 29/56 (51%)
Query: 962 EEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKE 1017
E K+ ++ + K+++ ++ E EEE +++++ K +++ E ++E
Sbjct: 77 SEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQE 132
Score = 29.5 bits (66), Expect = 0.85
Identities = 7/57 (12%), Positives = 28/57 (49%)
Query: 960 EEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEK 1016
E ++ +E K +++K + + +EE ++++ + ++++ + ++E
Sbjct: 77 SEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQEW 133
>d1zroa2 a.264.1.1 (A:283-596) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 314
Score = 33.9 bits (77), Expect = 0.082
Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 957 KEEEEEEKKK--EEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEE 1014
KEE ++ K+ E +K + + K E K+ E+ E+E +EE + +
Sbjct: 251 KEEYNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNFEDEFKEELHSDYK 310
Query: 1015 EK 1016
K
Sbjct: 311 NK 312
Score = 31.6 bits (71), Expect = 0.41
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 963 EKKKEE----KKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEE 1018
KKKEE K+ +E +K K E K + E KK ++ E + +EE
Sbjct: 248 SKKKEEYNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNFEDEFKEELHS 307
Query: 1019 EEK 1021
+ K
Sbjct: 308 DYK 310
Score = 28.1 bits (62), Expect = 5.2
Identities = 15/61 (24%), Positives = 28/61 (45%)
Query: 963 EKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEEEKK 1022
++ +KK+E ++ K+ + +K K E K K + K+ EK E+E K+
Sbjct: 244 KEWISKKKEEYNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNFEDEFKE 303
Query: 1023 R 1023
Sbjct: 304 E 304
>d1oisa_ e.15.1.1 (A:) Eukaryotic DNA topoisomerase I, N-terminal
DNA-binding fragment {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 223
Score = 33.5 bits (77), Expect = 0.090
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 984 KKEEKKKEEEEEKKKKKKEEEKEEEE 1009
+KE+KK+ +EKK+ + E EK EE+
Sbjct: 104 QKEQKKQLTSQEKKQIRLEREKFEED 129
Score = 32.4 bits (74), Expect = 0.18
Identities = 11/59 (18%), Positives = 27/59 (45%), Gaps = 10/59 (16%)
Query: 969 KKKEEEEKKKKEGKTKKEEKK----------KEEEEEKKKKKKEEEKEEEEKKEEEEKE 1017
+ +E G KE + + ++E+KK+ +E+K+ ++E+ E++
Sbjct: 71 LQVLKESGGPLNGIEIKEFSRCDFTKMFDYFQLQKEQKKQLTSQEKKQIRLEREKFEED 129
Score = 30.4 bits (69), Expect = 0.74
Identities = 10/32 (31%), Positives = 21/32 (65%), Gaps = 4/32 (12%)
Query: 963 EKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEE 994
+ +KE+KK+ ++KK+ + E++K EE+
Sbjct: 102 QLQKEQKKQLTSQEKKQI----RLEREKFEED 129
Score = 30.1 bits (68), Expect = 1.1
Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Query: 958 EEEEEEKK---KEEKKKEEEEKKKKEGK 982
+ ++E+KK +EKK+ E++K E
Sbjct: 102 QLQKEQKKQLTSQEKKQIRLEREKFEED 129
>d1k4ta3 e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase I,
N-terminal DNA-binding fragment {Human (Homo sapiens)
[TaxId: 9606]}
Length = 230
Score = 33.5 bits (77), Expect = 0.092
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 982 KTKKEEKKKEEEEEKKKKKKEEEKEEEE 1009
K + E +K+ +EEK K K+E EK +E
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 32.4 bits (74), Expect = 0.18
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 966 KEEKKKEEEEKKKKEGK---TKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKE 1017
++E EE+ K T+ + K + E +K+ KEE+ + +E+ E+ KE
Sbjct: 83 RKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 30.8 bits (70), Expect = 0.64
Identities = 7/28 (25%), Positives = 18/28 (64%)
Query: 995 EKKKKKKEEEKEEEEKKEEEEKEEEEKK 1022
+ + + +++ +EE+ K +EE E+ K+
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 30.5 bits (69), Expect = 0.91
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 958 EEEEEEKK---KEEKKKEEEEKKKKEGK 982
+ + E +K KEEK K +EE +K +
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 30.1 bits (68), Expect = 1.1
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Query: 963 EKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEE 994
+ + E +K+ +E+K K KEE +K +E
Sbjct: 110 KAQTEARKQMSKEEKLKI----KEENEKLLKE 137
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 332
Score = 33.8 bits (77), Expect = 0.10
Identities = 9/30 (30%), Positives = 20/30 (66%)
Query: 982 KTKKEEKKKEEEEEKKKKKKEEEKEEEEKK 1011
+ KE +K+ E EEK ++ K +++ E+++
Sbjct: 302 QAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 29.9 bits (67), Expect = 1.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 965 KKEEKKKEEEEKKKKEGKTKKEEKKKE 991
KE +K+ E E+K + K KE+ +KE
Sbjct: 304 VKENQKRRETEEKMRRAKLAKEKAEKE 330
Score = 29.6 bits (66), Expect = 2.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 996 KKKKKKEEEKEEEEKKEEEEKEEEEKKR 1023
K+ +K E EE+ ++ + KE+ EK+R
Sbjct: 304 VKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 29.2 bits (65), Expect = 2.5
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 995 EKKKKKKEEEKEEEEKKEEEEKEEEEKKRRRI 1026
+ K+ ++ +E EEK + +E+ ++ R+
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKERL 332
Score = 27.6 bits (61), Expect = 7.7
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 990 KEEEEEKKKKKKEEEKEEEEKKEEEEKEEE 1019
+ +E +K+++ EEK K +E+ E+E
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKE 330
Score = 27.6 bits (61), Expect = 8.7
Identities = 6/31 (19%), Positives = 17/31 (54%)
Query: 970 KKEEEEKKKKEGKTKKEEKKKEEEEEKKKKK 1000
+ +E +K+ +K + K +E+ +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 288
Score = 33.2 bits (74), Expect = 0.13
Identities = 7/51 (13%), Positives = 13/51 (25%)
Query: 902 RRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 952
R+ +R R + R + + R + R R
Sbjct: 238 EARRPTANKIILANREREKEEWAAASRPKTEKSAALEAITGSYRNQVERPR 288
Score = 30.9 bits (68), Expect = 0.76
Identities = 9/49 (18%), Positives = 13/49 (26%)
Query: 899 RRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 947
RR K +R R R + + R + R R
Sbjct: 240 RRPTANKIILANREREKEEWAAASRPKTEKSAALEAITGSYRNQVERPR 288
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 268
Score = 33.1 bits (75), Expect = 0.15
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 984 KKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEEEKK 1022
++E ++K E+ K EE+ E + EE K ++E
Sbjct: 219 QEEVEEKNILEKVKAAMTEEDLAELARATEELKLKQETP 257
Score = 32.3 bits (73), Expect = 0.25
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 984 KKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEEEKKR 1023
++ ++E EE+ +K + EE+ E EE K +
Sbjct: 214 PEKATQEEVEEKNILEKVKAAMTEEDLAELARATEELKLK 253
Score = 31.9 bits (72), Expect = 0.35
Identities = 10/49 (20%), Positives = 24/49 (48%)
Query: 961 EEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEE 1009
+ EK +E+ +E+ +K + +E+ + ++ K K+E + E
Sbjct: 213 DPEKATQEEVEEKNILEKVKAAMTEEDLAELARATEELKLKQETPDPPE 261
Score = 31.1 bits (70), Expect = 0.63
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 965 KKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEE 1015
++ ++E EEK E K + EE+ + + EE K ++E + E
Sbjct: 214 PEKATQEEVEEKNILE---KVKAAMTEEDLAELARATEELKLKQETPDPPE 261
Score = 30.8 bits (69), Expect = 0.67
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 957 KEEEEEEKKKEEKKKE---EEEKKKKEGKTKKEEKKKEEEE 994
+EE EEK EK K EE+ + T++ + K+E +
Sbjct: 218 TQEEVEEKNILEKVKAAMTEEDLAELARATEELKLKQETPD 258
>d1vqop1 a.94.1.1 (P:1-143) Ribosomal protein L19 (L19e) {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 143
Score = 31.6 bits (72), Expect = 0.17
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 890 KKKKEGGGGRRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 949
K KK GR R R+KKR ++ + R+ + R+ + R R +R + R R
Sbjct: 52 KDKKGNSRGRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDE 111
Score = 31.2 bits (71), Expect = 0.25
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 890 KKKKEGGGGRRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 949
K K+G R R R+K+R ++ R+ + R+ + R R +R + R R
Sbjct: 51 AKDKKGNSRGRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRD 110
Query: 950 R 950
Sbjct: 111 E 111
Score = 30.8 bits (70), Expect = 0.36
Identities = 12/55 (21%), Positives = 25/55 (45%)
Query: 907 RRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKEEEE 961
R R+R R+ +R ++ R+ + R+ + R R +R + R ++E
Sbjct: 59 RGRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGT 113
Score = 30.5 bits (69), Expect = 0.54
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 902 RRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 954
R R + R+ +R ++ R+ + R+ + R R +R + R R
Sbjct: 59 RGRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDE 111
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 794
Score = 32.8 bits (74), Expect = 0.25
Identities = 8/56 (14%), Positives = 15/56 (26%)
Query: 899 RRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 954
R + + + + R R R R RR + R + +
Sbjct: 729 MRDDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWPWMK 784
Score = 31.2 bits (70), Expect = 0.67
Identities = 9/57 (15%), Positives = 11/57 (19%), Gaps = 6/57 (10%)
Query: 901 RRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRR------RRRRRRRRRRRRRRRR 951
R K R R R R RR R + +
Sbjct: 728 EMRDDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWPWMK 784
Score = 31.2 bits (70), Expect = 0.68
Identities = 9/57 (15%), Positives = 13/57 (22%), Gaps = 6/57 (10%)
Query: 900 RRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRR------RRRRRRRRRRRRRRRR 950
R K ++R R R R RR R + +
Sbjct: 728 EMRDDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWPWMK 784
Score = 30.5 bits (68), Expect = 1.4
Identities = 11/66 (16%), Positives = 16/66 (24%), Gaps = 6/66 (9%)
Query: 893 KEGGGGRRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRR------RRRRRRRRRR 946
K G G R + ++ R R R R RR R +
Sbjct: 719 KAGLLGLLEEMRDDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVK 778
Query: 947 RRRRRR 952
+
Sbjct: 779 HWPWMK 784
>d1zroa1 a.264.1.1 (A:8-282) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 275
Score = 31.1 bits (70), Expect = 0.62
Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 4/53 (7%)
Query: 963 EKKKEE----KKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKK 1011
+ K E K+ E +K KE K E + + K + E K
Sbjct: 220 IRSKFEWHTLSKEYETQKVPKENAENYLIKISENKNDAKVSLLLNNCDAEYSK 272
Score = 30.8 bits (69), Expect = 0.85
Identities = 10/58 (17%), Positives = 21/58 (36%)
Query: 964 KKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEEEK 1021
+ + K E KE +T+K K+ E K + + + + + E +
Sbjct: 216 RDWIIRSKFEWHTLSKEYETQKVPKENAENYLIKISENKNDAKVSLLLNNCDAEYSKY 273
Score = 28.1 bits (62), Expect = 4.9
Identities = 14/73 (19%), Positives = 25/73 (34%)
Query: 950 RRRRRSGKEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEE 1009
R K + + K + E+E K + + + E K+ E +K +E
Sbjct: 182 LERDNRAKLPKSKCKNNALYEACEKECIDPCMKYRDWIIRSKFEWHTLSKEYETQKVPKE 241
Query: 1010 KKEEEEKEEEEKK 1022
E + E K
Sbjct: 242 NAENYLIKISENK 254
>d1jfxa_ c.1.8.8 (A:) Streptomyces lysozyme {Streptomyces
coelicolor, "mueller" dsm3030 [TaxId: 1902]}
Length = 217
Score = 30.5 bits (68), Expect = 0.79
Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Query: 726 IKGVDVVR----RDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 772
++G+DV +WS + S F + + +Y D N +
Sbjct: 5 VQGIDVSHWQGSINWSSVKSAGMSFAYIKATEGTNYKDDRFSANYTNAYNA 55
>d1vqon1 c.55.4.1 (N:1-186) Ribosomal protein L18 (L18p) {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 186
Score = 30.3 bits (68), Expect = 0.90
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 921 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGK 957
R + RRRR R +R R + + R R+S K
Sbjct: 5 RYKVPMRRRREARTDYHQRLRLLKSGKPRLVARKSNK 41
Score = 28.0 bits (62), Expect = 4.0
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 912 RRRSRRRRRRRRRRRRRRRRRRRRRRRRR 940
R + RRRR R +R R + + R
Sbjct: 5 RYKVPMRRRREARTDYHQRLRLLKSGKPR 33
Score = 27.6 bits (61), Expect = 5.3
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 917 RRRRRRRRRRRRRRRRRRRRRRRRRRRRR 945
R + RRRR R +R R + + R
Sbjct: 5 RYKVPMRRRREARTDYHQRLRLLKSGKPR 33
Score = 27.6 bits (61), Expect = 5.3
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 918 RRRRRRRRRRRRRRRRRRRRRRRRRRRRR 946
R + RRRR R +R R + + R
Sbjct: 5 RYKVPMRRRREARTDYHQRLRLLKSGKPR 33
Score = 27.6 bits (61), Expect = 5.3
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 919 RRRRRRRRRRRRRRRRRRRRRRRRRRRRR 947
R + RRRR R +R R + + R
Sbjct: 5 RYKVPMRRRREARTDYHQRLRLLKSGKPR 33
Score = 27.6 bits (61), Expect = 5.3
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 920 RRRRRRRRRRRRRRRRRRRRRRRRRRRRR 948
R + RRRR R +R R + + R
Sbjct: 5 RYKVPMRRRREARTDYHQRLRLLKSGKPR 33
Score = 27.2 bits (60), Expect = 8.6
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 902 RRRKKRRRSRRRRSRRRRRRRRRRRRRRR 930
R + RR R R+ +R R + + R
Sbjct: 5 RYKVPMRRRREARTDYHQRLRLLKSGKPR 33
Score = 26.8 bits (59), Expect = 9.7
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 914 RSRRRRRRRRRRRRRRRRRRRRRRRRRRR 942
R + RRRR R +R R + + R
Sbjct: 5 RYKVPMRRRREARTDYHQRLRLLKSGKPR 33
>d1ofcx3 a.187.1.1 (X:697-798) HAND domain of the nucleosome
remodeling ATPase ISWI {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 102
Score = 29.0 bits (65), Expect = 0.95
Identities = 12/52 (23%), Positives = 27/52 (51%)
Query: 972 EEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEEEKKR 1023
++E ++ K K E + K ++EE+++ +E + E+E +EK+
Sbjct: 44 DQEIYYFRKTVGYKVPKNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKEN 95
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay
scallop (Aequipecten irradians) [TaxId: 31199]}
Length = 789
Score = 30.5 bits (68), Expect = 1.3
Identities = 7/52 (13%), Positives = 17/52 (32%)
Query: 901 RRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 952
R ++ + R R+ ++ + +R +R R+ R
Sbjct: 724 EMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 775
Score = 30.5 bits (68), Expect = 1.3
Identities = 9/56 (16%), Positives = 19/56 (33%)
Query: 899 RRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 954
R R K + R R+ ++ + +R +R R+ R + +
Sbjct: 725 MRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQWWK 780
Score = 30.5 bits (68), Expect = 1.4
Identities = 7/52 (13%), Positives = 18/52 (34%)
Query: 900 RRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 951
R + + ++ R R+ ++ + +R +R R+ R
Sbjct: 724 EMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 775
Score = 29.3 bits (65), Expect = 2.9
Identities = 8/52 (15%), Positives = 17/52 (32%)
Query: 902 RRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 953
R +R + R R+ ++ + +R +R R+ R
Sbjct: 724 EMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 775
Score = 28.1 bits (62), Expect = 7.0
Identities = 9/52 (17%), Positives = 18/52 (34%)
Query: 899 RRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 950
R R + S + R R+ ++ + +R +R R+ R
Sbjct: 724 EMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 775
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 84
Score = 28.2 bits (63), Expect = 1.3
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 984 KKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEEEKKRRRIRRK 1029
K + K +E+++K K E +K + EKEE E +++ + +
Sbjct: 21 KLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKV 66
Score = 25.9 bits (57), Expect = 8.3
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 970 KKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEE-EEKKEEEEK 1016
+ E+ + K + +K K E K + EKEE E +++E EK
Sbjct: 18 EDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEK 65
>d2ayua1 d.305.1.1 (A:70-370) Nucleosome assembly protein, NAP
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 30.0 bits (67), Expect = 1.4
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 957 KEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEK 1016
E E E K +K K E++ + +++ K E+ K ++ E E E +EEEK
Sbjct: 46 VEMFELENKFLQKYKPIWEQRSRIISGQEQPK--PEQIAKGQEIVESLNETELLVDEEEK 103
Query: 1017 EEEEKK 1022
+ + +
Sbjct: 104 AQNDSE 109
Score = 28.1 bits (62), Expect = 5.0
Identities = 12/51 (23%), Positives = 28/51 (54%)
Query: 949 RRRRRRSGKEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKK 999
+R R SG+E+ + E+ + ++ E + + ++E+ + + EEE+ K
Sbjct: 65 QRSRIISGQEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVKG 115
Score = 27.7 bits (61), Expect = 7.4
Identities = 12/66 (18%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 958 EEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKE 1017
E E + K +K + +++ + +E+ K E+ + ++ E E E +EE++
Sbjct: 46 VEMFELENKFLQKYKPIWEQRSRIISGQEQPKPEQIAKGQEI--VESLNETELLVDEEEK 103
Query: 1018 EEEKKR 1023
+
Sbjct: 104 AQNDSE 109
>d2qamc1 b.34.5.3 (C:125-269) C-terminal domain of ribosomal protein
L2 {Escherichia coli [TaxId: 562]}
Length = 145
Score = 29.1 bits (65), Expect = 1.4
Identities = 8/60 (13%), Positives = 18/60 (30%)
Query: 898 GRRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGK 957
G+ R + R R + R + + + ++ R +R+ K
Sbjct: 81 GKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDK 140
>d1wi3a_ a.4.1.1 (A:) DNA-binding protein SATB2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 71
Score = 27.7 bits (61), Expect = 1.4
Identities = 8/69 (11%), Positives = 18/69 (26%)
Query: 869 GGGGGGRRRRRRRRSGKEEEEKKKKEGGGGRRRRRRKKRRRSRRRRSRRRRRRRRRRRRR 928
G G R R + S + + G + S + + + + +R
Sbjct: 1 GSSGSSGPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQR 60
Query: 929 RRRRRRRRR 937
+
Sbjct: 61 YHVKHSGPS 69
Score = 25.4 bits (55), Expect = 9.0
Identities = 6/69 (8%), Positives = 16/69 (23%)
Query: 870 GGGGGRRRRRRRRSGKEEEEKKKKEGGGGRRRRRRKKRRRSRRRRSRRRRRRRRRRRRRR 929
G G R R + E + ++ + + + + +R
Sbjct: 1 GSSGSSGPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQR 60
Query: 930 RRRRRRRRR 938
+
Sbjct: 61 YHVKHSGPS 69
Score = 25.4 bits (55), Expect = 9.2
Identities = 7/69 (10%), Positives = 15/69 (21%), Gaps = 6/69 (8%)
Query: 894 EGGGGRRRRRRKKRRRSRR------RRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 947
G G R R + + + + + + +R
Sbjct: 3 SGSSGPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYH 62
Query: 948 RRRRRRRSG 956
+ SG
Sbjct: 63 VKHSGPSSG 71
>d1v63a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 101
Score = 28.3 bits (63), Expect = 1.4
Identities = 6/45 (13%), Positives = 18/45 (40%)
Query: 958 EEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKE 1002
++E KK E+++ + + + + +E K++
Sbjct: 51 SQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKRK 95
Score = 27.9 bits (62), Expect = 2.0
Identities = 7/74 (9%), Positives = 28/74 (37%)
Query: 957 KEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEK 1016
+E + KE + + + +K+ ++ ++++++ + + +
Sbjct: 21 QELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKSLSP 80
Query: 1017 EEEEKKRRRIRRKR 1030
++ + I KR
Sbjct: 81 QDRAAYKEYISNKR 94
Score = 26.4 bits (58), Expect = 6.5
Identities = 4/46 (8%), Positives = 19/46 (41%)
Query: 973 EEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEE 1018
+ +K+ + ++++++ + + K + K+ K +
Sbjct: 50 QSQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKRK 95
>d1k4ta1 a.2.8.1 (A:641-712) Eukaryotic DNA topoisomerase I,
dispensable insert domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 72
Score = 27.4 bits (61), Expect = 1.6
Identities = 15/61 (24%), Positives = 28/61 (45%)
Query: 962 EEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEEEK 1021
+ KK++ + K K ++ K ++ E KKK + +E+ K E + + EE
Sbjct: 12 DAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLEVQATDREEN 71
Query: 1022 K 1022
K
Sbjct: 72 K 72
Score = 26.3 bits (58), Expect = 4.8
Identities = 10/45 (22%), Positives = 25/45 (55%)
Query: 984 KKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEEEKKRRRIRR 1028
K + KKE+ + ++ K + + + K+ + K+ E K++ ++R
Sbjct: 9 TKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQR 53
>d1vqom1 d.12.1.2 (M:1-194) Ribosomal protein L15e {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 194
Score = 28.9 bits (65), Expect = 2.0
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 909 RSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSG 956
R R+ R+RR + RR +R+ R RR+ +R R R
Sbjct: 64 RVSVRKGSARKRRHKAGRRSKRQGVTRITRRKDIQRVAEERASRTFPN 111
Score = 28.2 bits (63), Expect = 3.5
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 914 RSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGK 957
R R+ R+RR + RR +R+ R RR+ +R R+ +
Sbjct: 64 RVSVRKGSARKRRHKAGRRSKRQGVTRITRRKDIQRVAEERASR 107
Score = 28.2 bits (63), Expect = 4.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 907 RRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 951
R R+ +R+RR + RR +R+ R RR+ +R R R
Sbjct: 64 RVSVRKGSARKRRHKAGRRSKRQGVTRITRRKDIQRVAEERASRT 108
Score = 27.0 bits (60), Expect = 9.6
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 897 GGRRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRR 935
G R+RR K RRS+R+ R RR+ +R R R
Sbjct: 70 GSARKRRHKAGRRSKRQGVTRITRRKDIQRVAEERASRT 108
>d2nllb_ g.39.1.2 (B:) Thyroid hormone receptor (TR-beta)
DNA-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 27.8 bits (61), Expect = 2.0
Identities = 13/72 (18%), Positives = 23/72 (31%)
Query: 876 RRRRRRRSGKEEEEKKKKEGGGGRRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRR 935
RR + K EG + R + + R ++ +R +R
Sbjct: 27 FFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKR 86
Query: 936 RRRRRRRRRRRR 947
+ R +RRR
Sbjct: 87 KLIEENREKRRR 98
Score = 26.3 bits (57), Expect = 7.9
Identities = 11/72 (15%), Positives = 24/72 (33%)
Query: 879 RRRRSGKEEEEKKKKEGGGGRRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRR 938
RR+ ++ G+ + R + + R ++ +R +R
Sbjct: 27 FFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKR 86
Query: 939 RRRRRRRRRRRR 950
+ R +RRR
Sbjct: 87 KLIEENREKRRR 98
>d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 248
Score = 29.2 bits (65), Expect = 2.1
Identities = 11/64 (17%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 957 KEEEEEEKKKE-EKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEE 1015
+ KK + E++ + + K + + KK KK + + +K +E + + ++
Sbjct: 114 RYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQG 173
Query: 1016 KEEE 1019
+ E
Sbjct: 174 ELEN 177
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus
thermophilus, strain hb27 [TaxId: 274]}
Length = 110
Score = 28.0 bits (62), Expect = 2.5
Identities = 15/60 (25%), Positives = 32/60 (53%)
Query: 962 EEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEEEK 1021
+ + +E KK+ +E + ++ K+ K EE+E + + EE ++ EE +E+E +
Sbjct: 34 DREVQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALREKEAR 93
Score = 26.4 bits (58), Expect = 7.8
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 948 RRRRRRRSGKEEEEEEKKKEEK-----KKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKK 1001
R + + +E + E+ + K EE+E GK EE K+ EE ++K+ +
Sbjct: 35 REVQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALREKEAR 93
>d2ecba1 a.4.1.1 (A:8-83) Zinc fingers and homeoboxes protein 1,
ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 76
Score = 27.0 bits (59), Expect = 2.7
Identities = 7/65 (10%), Positives = 22/65 (33%)
Query: 899 RRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKE 958
++ + + + + S R R + + RR +++ + ++
Sbjct: 6 QKFKEKTAEQLRVLQASFLNSSVLTDEELNRLRAQTKLTRREIDAWFTEKKKSKALKEEK 65
Query: 959 EEEEE 963
E +E
Sbjct: 66 MEIDE 70
Score = 26.6 bits (58), Expect = 3.9
Identities = 9/63 (14%), Positives = 22/63 (34%)
Query: 901 RRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKEEE 960
++ K++ + R + R R + + RR +++ +EE
Sbjct: 5 PQKFKEKTAEQLRVLQASFLNSSVLTDEELNRLRAQTKLTRREIDAWFTEKKKSKALKEE 64
Query: 961 EEE 963
+ E
Sbjct: 65 KME 67
>d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943)
{Staphylococcus aureus [TaxId: 1280]}
Length = 185
Score = 28.5 bits (62), Expect = 2.9
Identities = 21/175 (12%), Positives = 60/175 (34%)
Query: 846 KKEEEKKKKKEEEEEGGEKEEEEGGGGGGRRRRRRRRSGKEEEEKKKKEGGGGRRRRRRK 905
K+ +K K EE + K+ E + K K+ R ++
Sbjct: 11 LKQVDKIKDDEEPIKTVGKKIAELDEKKKKLTEDVNSKDTAVRGKAVKDLIKNADDRLKE 70
Query: 906 KRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKEEEEEEKK 965
+ + + ++ + +R+ ++ + + + + ++
Sbjct: 71 FEKEEDAIKKSEQDFKKAKSHVDNIDNDVKRKEVKQLDDVLKEKYKLHSDYAKAYKKAVN 130
Query: 966 KEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEEE 1020
E+ + + + E+ K E+ KK K+ ++ + K ++EK++ +
Sbjct: 131 SEKTLFKYLNQNDATQQGVNEKSKAIEQNYKKLKEVSDKYTKVLNKVQKEKQDVD 185
>d2c6ja1 a.264.1.1 (A:15-308) Duffy receptor, alpha form {Plasmodium
knowlesi [TaxId: 5850]}
Length = 294
Score = 28.8 bits (64), Expect = 3.0
Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Query: 963 EKKKEE----KKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEE 1018
+KK++ K KK ++ T+ + +++ KE E E K +
Sbjct: 229 TRKKKQWDVLSTKFSSVKKTQKIGTENIATAYDILKQELNGFKEATFENEINKRDNLYNH 288
Score = 28.1 bits (62), Expect = 5.6
Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Query: 962 EEKKKE-EKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEEE 1020
KKK+ + + KK K E + K++ +E E + + +
Sbjct: 229 TRKKKQWDVLSTKFSSVKKTQKIGTENIATAYDILKQELNGFKEATFENEINKRDNLYNH 288
Query: 1021 K 1021
Sbjct: 289 L 289
Score = 27.7 bits (61), Expect = 8.0
Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Query: 964 KKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEEEKKR 1023
+ +KK++ + K +K ++ E + K+E +E E E KR
Sbjct: 225 DQWITRKKKQWDVLST--KFSSVKKTQKIGTENIATAYDILKQELNGFKEATFENEINKR 282
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 503
Score = 29.3 bits (64), Expect = 3.1
Identities = 13/74 (17%), Positives = 33/74 (44%)
Query: 925 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKEEEEEEKKKEEKKKEEEEKKKKEGKTK 984
RRRR ++ R+ +R +RR G + +EE++ ++ + ++E
Sbjct: 22 RRRRDTQQVELRKAKRDEALAKRRNFIPPTDGADSDEEDESSVSADQQFYSQLQQELPQM 81
Query: 985 KEEKKKEEEEEKKK 998
++ ++ +E+
Sbjct: 82 TQQLNSDDMQEQLS 95
>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein
LAV1-2) {Physarum polycephalum [TaxId: 5791]}
Length = 321
Score = 28.8 bits (63), Expect = 3.1
Identities = 12/70 (17%), Positives = 32/70 (45%)
Query: 960 EEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEE 1019
+E ++E K+ E ++ K +E+ + + + +KE+E+K + E +++
Sbjct: 4 SQELTQREANVKKVHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQK 63
Query: 1020 EKKRRRIRRK 1029
+ R +
Sbjct: 64 VQNEFDARER 73
>d3alca_ g.38.1.1 (A:) Ethanol regulon transcriptional activator
ALCR DNA-binding domain {Emericella nidulans, also known
as Aspergillus nidulans [TaxId: 162425]}
Length = 65
Score = 26.7 bits (58), Expect = 3.2
Identities = 10/64 (15%), Positives = 17/64 (26%), Gaps = 5/64 (7%)
Query: 897 GGRRRRRRKKRR-----RSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 951
G RR++ R +RR R +R + +R
Sbjct: 1 GSMADTRRRQNHSCDPCRKGKRRCDAPENRNEANENGWVSCSNCKRWNKDCTFNWLSSQR 60
Query: 952 RRRS 955
+ S
Sbjct: 61 SKNS 64
>d1l4sa_ d.204.1.1 (A:) Ribosome binding protein Y (YfiA homologue)
{Escherichia coli [TaxId: 562]}
Length = 112
Score = 27.5 bits (61), Expect = 3.2
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 932 RRRRRRRRRRRRRRRRRRRRRRRSGKEEEEEE 963
R+ + + + RR + + EE EEE
Sbjct: 81 ERQLNKLQHKGEARRAATSVKDANFVEEVEEE 112
Score = 26.0 bits (57), Expect = 9.6
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 937 RRRRRRRRRRRRRRRRRRSGKEEEEEEKKKEE 968
R+ + + + RR S K+ E+ +EE
Sbjct: 81 ERQLNKLQHKGEARRAATSVKDANFVEEVEEE 112
>d1smyd_ e.29.1.2 (D:) RNA-polymerase beta-prime {Thermus thermophilus
[TaxId: 274]}
Length = 1504
Score = 29.4 bits (65), Expect = 3.2
Identities = 23/187 (12%), Positives = 46/187 (24%), Gaps = 6/187 (3%)
Query: 850 EKKKKKEEEE------EGGEKEEEEGGGGGGRRRRRRRRSGKEEEEKKKKEGGGGRRRRR 903
EK++ +EE E G + G+E G R
Sbjct: 147 EKRQLLTDEEYRELRYGKQETYPLPPGVDALVKDGEEVVKGQELAPGVVSRLDGVALYRF 206
Query: 904 RKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKEEEEEE 963
++ R ++ R R + + R +E EE
Sbjct: 207 PRRVRVEYVKKERAGLRLPLAAWVEKEAYKPGEILAELPEPYLFRAEEEGVVELKELEEG 266
Query: 964 KKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEKEEEEKKR 1023
++++E E EK + E + ++ + E ++
Sbjct: 267 AFLVLRREDEPVATYFLPVGMTPLVVHGEIVEKGQPLAEAKGLLRMPRQVRAAQVEAEEE 326
Query: 1024 RRIRRKR 1030
Sbjct: 327 GETVYLT 333
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional)
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 368
Score = 29.1 bits (64), Expect = 3.3
Identities = 5/34 (14%), Positives = 16/34 (47%)
Query: 991 EEEEEKKKKKKEEEKEEEEKKEEEEKEEEEKKRR 1024
+ E+ + E++ E E +E+ + +++
Sbjct: 2 RQRTEELLRCNEQQAAELETCKEQLFQSNMERKE 35
Score = 28.7 bits (63), Expect = 4.3
Identities = 4/34 (11%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 993 EEEKKKKKKEEEKEEEEKKEEEEK-EEEEKKRRR 1025
+ ++ + E++ E + +E+ + +R+
Sbjct: 2 RQRTEELLRCNEQQAAELETCKEQLFQSNMERKE 35
>d1uw6a_ b.96.1.1 (A:) Acetylcholine binding protein (ACHBP) {Great
pond snail (Lymnaea stagnalis) [TaxId: 6523]}
Length = 208
Score = 28.6 bits (63), Expect = 3.3
Identities = 21/141 (14%), Positives = 42/141 (29%), Gaps = 8/141 (5%)
Query: 192 NPNAKDDSLPLATDHENK-KVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVI 250
N + D + + + + E + Q V G+V + C +
Sbjct: 67 NSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDV 126
Query: 251 -------VQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKY 303
KI + +P + SE+ ++++ILD +K Y
Sbjct: 127 SGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTY 186
Query: 304 AFNLPGVPDLSEYLEVRYSAK 324
+ D+ L R +
Sbjct: 187 SCCPEAYEDVEVSLNFRKKGR 207
>d2gyco1 a.144.2.1 (O:2-116) Ribosomal protein L20 {Escherichia coli
[TaxId: 562]}
Length = 115
Score = 27.3 bits (61), Expect = 3.4
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 895 GGGGRRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 949
G R R +K ++++ R R R + + + R RR+R+R+ R+
Sbjct: 4 RGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQL 58
>d1wuua1 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 215
Score = 28.7 bits (63), Expect = 3.4
Identities = 15/98 (15%), Positives = 32/98 (32%), Gaps = 5/98 (5%)
Query: 207 ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEH 266
E ++ FR F E PG V L G E+ ++ V+ ++ L+
Sbjct: 14 EARRAFREEFGAEPELAVSAPGRVNLIG-----EHTDYNQGLVLPMALELMTVLVGSPRK 68
Query: 267 LKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYA 304
++ ++ E ++ ++A
Sbjct: 69 DGLVSLLTTSEGADEPQRLQFPLPTAQRSLEPGTPRWA 106
>d1vqoa2 b.40.4.5 (A:1-90) N-terminal domain of ribosomal protein L2
{Archaeon Haloarcula marismortui [TaxId: 2238]}
Length = 90
Score = 27.0 bits (60), Expect = 3.4
Identities = 7/34 (20%), Positives = 15/34 (44%)
Query: 898 GRRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRR 931
GRR + +++ R + R+ R + R+
Sbjct: 1 GRRIQGQRRGRGTSTFRAPSHRYKADLEHRKVED 34
Score = 26.2 bits (58), Expect = 5.7
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 897 GGRRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRR 930
G R + +R+ R S R R + R+
Sbjct: 1 GRRIQGQRRGRGTSTFRAPSHRYKADLEHRKVED 34
Score = 25.8 bits (57), Expect = 9.9
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 911 RRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRR 943
RR + +RR R R R + R+
Sbjct: 2 RRIQGQRRGRGTSTFRAPSHRYKADLEHRKVED 34
>d1wgsa_ b.34.13.3 (A:) Probable histone acetyltransferase MYST1
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 133
Score = 27.6 bits (61), Expect = 3.5
Identities = 13/66 (19%), Positives = 28/66 (42%)
Query: 950 RRRRRSGKEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEE 1009
+ R + + ++ +K +K E ++ E K + +K+K +E +K E
Sbjct: 63 DKNRLALTKTVKDAVQKNSEKYLSELAEQPERKITRNQKRKHDEINHVQKTYAEMDPTTA 122
Query: 1010 KKEEEE 1015
E+E
Sbjct: 123 ALEKES 128
>d1m4za_ b.34.12.1 (A:) Origin-recognition complex protein 120kDa
subunit, Orc1p {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 217
Score = 28.4 bits (63), Expect = 3.7
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 935 RRRRRRRRRRRRRRRRRRRRSGKEE 959
++R RRR + +R S +
Sbjct: 28 GGQKRLRRRGAKTEHYLKRSSDGIK 52
>d2j01u1 a.144.2.1 (U:2-118) Ribosomal protein L20 {Thermus
thermophilus [TaxId: 274]}
Length = 117
Score = 27.3 bits (61), Expect = 4.0
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 895 GGGGRRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 948
G RRR+ +K + ++ R + R+ R R+RR+R RR
Sbjct: 5 TGVVRRRKHKKILKLAKGYWGLRSKSFRKARETLFAAGNYAYAHRKRRKRDFRR 58
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]}
Length = 97
Score = 27.0 bits (60), Expect = 4.0
Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 15/79 (18%)
Query: 958 EEEEEEKKKEEKKKEEEEKKKKE---------------GKTKKEEKKKEEEEEKKKKKKE 1002
E+E ++ ++ + E ++K +E K +E K ++K +
Sbjct: 3 EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESA 62
Query: 1003 EEKEEEEKKEEEEKEEEEK 1021
E K E++ E K
Sbjct: 63 LTALETALKGEDKAAIEAK 81
>d1v64a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 108
Score = 27.2 bits (60), Expect = 4.3
Identities = 15/99 (15%), Positives = 35/99 (35%), Gaps = 9/99 (9%)
Query: 937 RRRRRRRRRRRRRRRRRRSGKEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEK 996
+ + + R + + E K E+ ++ K ++EK
Sbjct: 5 SSGQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCS----QQWKLLSQKEK 60
Query: 997 KKKKKEEEKEEEEKKEE-----EEKEEEEKKRRRIRRKR 1030
K+ ++++++ + E E EEE++R K
Sbjct: 61 DAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKM 99
Score = 26.5 bits (58), Expect = 7.4
Identities = 10/49 (20%), Positives = 24/49 (48%)
Query: 957 KEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEK 1005
K ++EK KK ++++K + + E EEE+++ +++
Sbjct: 53 KLLSQKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLN 101
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal
domain {Thermus thermophilus [TaxId: 274]}
Length = 66
Score = 25.8 bits (57), Expect = 5.3
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 961 EEEKKKEEKKKEEEEK-----KKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEE 1013
EE ++++EK+ +E ++K EK +E E ++ + +E E+ E+ E
Sbjct: 3 EEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIRE 60
>d1vqol1 c.12.1.1 (L:1-150) Ribosomal protein L15 (L15p) {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 150
Score = 27.3 bits (60), Expect = 5.9
Identities = 11/101 (10%), Positives = 28/101 (27%)
Query: 890 KKKKEGGGGRRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 949
KK++ G K RR + R R R + + +R ++ +
Sbjct: 4 KKRQRGSRTHGGGSHKNRRGAGHRGGRGDAGRDKHEFHNHEPLGKSGFKRPQKVQEEAAT 63
Query: 950 RRRRRSGKEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKK 990
R + + ++ + ++ +
Sbjct: 64 IDVREIDENVTLLAADDVAEVEDGGFRVDVRDVVEEADDAD 104
>d1v4ra1 a.4.5.6 (A:1-100) Transcriptional repressor TraR,
N-terminal domain {Streptomyces sp. [TaxId: 1931]}
Length = 100
Score = 26.4 bits (58), Expect = 7.1
Identities = 5/36 (13%), Positives = 8/36 (22%)
Query: 921 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSG 956
R + R +R + R G
Sbjct: 64 SSRGALGTVVEKNPIVITGADRLKRMEKNGMRYAPG 99
>d2zjrn1 a.144.2.1 (N:2-118) Ribosomal protein L20 {Deinococcus
radiodurans [TaxId: 1299]}
Length = 117
Score = 26.5 bits (59), Expect = 7.5
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 895 GGGGRRRRRRKKRRRSRRRRSRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR 948
G RRRR +K +R++ R ++ R + R RR ++R RR
Sbjct: 5 TGIVRRRRHKKVLKRAKGFWGSRSKQYRNAFQTLLNAATYEYRDRRNKKRDFRR 58
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 319
Score = 27.6 bits (60), Expect = 7.6
Identities = 13/77 (16%), Positives = 24/77 (31%), Gaps = 5/77 (6%)
Query: 957 KEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEE-----EEEKKKKKKEEEKEEEEKK 1011
+E + K ++ K+ K K K E E E + + E
Sbjct: 136 REIDYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHLSGIGVNENDVWEAMHKLNLPEDP 195
Query: 1012 EEEEKEEEEKKRRRIRR 1028
+ +++ IRR
Sbjct: 196 TKWSQDDLLAFASEIRR 212
>d1zhxa1 d.338.1.1 (A:2-434) Oxysterol-binding protein homolog 4, KES1
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 433
Score = 27.7 bits (61), Expect = 7.6
Identities = 14/76 (18%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Query: 947 RRRRRRRRSGKEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKE 1006
R+ + + + K + EE +++ K+EE K + + K +
Sbjct: 313 RKAWYDVAGAIKLGDFNLIAKTKTELEETQRELR---KEEEAKGISWQRRWFKDFDYSVT 369
Query: 1007 EEEKKEEEEKEEEEKK 1022
EE EK++ K
Sbjct: 370 PEEGALVPEKDDTFLK 385
>d1fuia2 c.85.1.1 (A:1-355) L-fucose isomerase, N-terminal and second
domains {Escherichia coli [TaxId: 562]}
Length = 355
Score = 27.9 bits (62), Expect = 7.7
Identities = 8/45 (17%), Positives = 20/45 (44%)
Query: 964 KKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEE 1008
++ ++K +E E + K + E+E K+ ++ E+
Sbjct: 215 RRIDQKIYDEAELEMALAWADKNFRYGEDENNKQYQRNAEQSRAV 259
>d2d4ca1 a.238.1.1 (A:11-247) Endophilin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 237
Score = 27.4 bits (60), Expect = 8.0
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 963 EKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEE 1007
+ KK E + + K K++ K +EE + +K +E KE
Sbjct: 146 SALQHHLKKLEGRRLDFDYKKKRQGKIPDEELRQALEKFDESKEI 190
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 27.2 bits (59), Expect = 8.3
Identities = 8/106 (7%), Positives = 16/106 (15%)
Query: 855 KEEEEEGGEKEEEEGGGGGGRRRRRRRRSGKEEEEKKKKEGGGGRRRRRRKKRRRSRRRR 914
+ + + + ++ G R + R
Sbjct: 42 GYIKHGRIDPWLPQSHQQNRMIMQIAADVAGRYAKEGYFVILDGVVRPDWLPAFTALARP 101
Query: 915 SRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSGKEEE 960
R R R + G E
Sbjct: 102 LHYIVLRTTAAEAIERCLDRGGDSLSDPLVVADLHSQFADLGAFEH 147
>d1f3ub_ b.65.1.1 (B:) TFIIF alpha subunit, Rap74 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 149
Score = 26.7 bits (59), Expect = 8.3
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 876 RRRRRRRSGKEEEEKKKKEGGGGRRRRRRKKRRRSRRRRSRRRR 919
R ++ +EEE + G R+ R + RR+ + R
Sbjct: 45 RDLSNKKIYQEEEMPESGAGSEFNRKLREEARRKKYGIVLKEFR 88
Score = 26.7 bits (59), Expect = 9.0
Identities = 7/48 (14%), Positives = 18/48 (37%)
Query: 949 RRRRRRSGKEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEK 996
R + +EEE + + + +++ K K+ E++
Sbjct: 45 RDLSNKKIYQEEEMPESGAGSEFNRKLREEARRKKYGIVLKEFRPEDQ 92
>d1ul5a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 7,
DNA-binding domain {Thale cress (Arabidopsis thaliana)
[TaxId: 3702]}
Length = 86
Score = 25.9 bits (57), Expect = 8.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 908 RRSRRRRSRRRRRRRRRRR 926
+RS RR+ R RR+R+
Sbjct: 61 KRSCRRKLERHNNRRKRKP 79
>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP
module {Pseudomonas putida [TaxId: 303]}
Length = 407
Score = 27.5 bits (60), Expect = 8.9
Identities = 6/64 (9%), Positives = 19/64 (29%)
Query: 957 KEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKEEEEKKEEEEK 1016
++ + + ++ K +++E + E E ++E E+
Sbjct: 323 ADDWSHFPLGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQYGTLANGHI 382
Query: 1017 EEEE 1020
Sbjct: 383 PSAA 386
>d1uula_ c.47.1.10 (A:) Tryparedoxin peroxidase (thioredoxin
peroxidase homologue) {Trypanosoma cruzi [TaxId: 5693]}
Length = 194
Score = 27.0 bits (59), Expect = 9.4
Identities = 21/123 (17%), Positives = 35/123 (28%), Gaps = 10/123 (8%)
Query: 29 IDLIDYVGKYLVLSSIPG---------KGHAKILTAGVGWAGAEVILTRFLDLWVGARGA 79
+ L Y GK+LVL P G EV+ +
Sbjct: 26 VALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWT 85
Query: 80 EFDWKYIQNSLDSNICLIDKTNKFA-AFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEY 138
+ K + L DKT ++ LK+ G + + +N+ +
Sbjct: 86 SIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLP 145
Query: 139 TER 141
R
Sbjct: 146 VGR 148
>d1jmma_ b.30.6.1 (A:) V-region of surface antigen I/II (SA I/II, PAC)
{Streptococcus mutans [TaxId: 1309]}
Length = 377
Score = 27.3 bits (60), Expect = 9.5
Identities = 10/65 (15%), Positives = 18/65 (27%), Gaps = 2/65 (3%)
Query: 955 SGKEEEEEEKKKEEKKKEEEEKKKKEGKTKKEEKKKE--EEEEKKKKKKEEEKEEEEKKE 1012
+ E+E+ + E EK K E E + + E + K
Sbjct: 9 VKLKAYEDEQASIKAALAELEKHKNEDGNLTEPSAQNLVYDLEPNANLSLTTDGKFLKAS 68
Query: 1013 EEEKE 1017
+
Sbjct: 69 AVDDA 73
>d1rq0a_ e.38.1.1 (A:) Peptide chain release factor 1, RF1 {Thermotoga
maritima [TaxId: 2336]}
Length = 333
Score = 27.4 bits (60), Expect = 9.9
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 962 EEKKKE-EKKKEEEEKKKKEGKTKKEEKKKEEEEEKKKKKKEEEKE-----EEEKKEEEE 1015
+EKKKE EK + ++ K E K EE E + +E +E EE + E E
Sbjct: 2 KEKKKEIEKLLARPDLTPEQMKNYGMEYAKIEEIENITNRIKETQEFIELLREEGENELE 61
Query: 1016 KEEEEKKRRRIRRKR 1030
E+ EK+ ++ ++
Sbjct: 62 IEKYEKELDQLYQEL 76
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.136 0.385
Gapped
Lambda K H
0.267 0.0396 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 4,032,195
Number of extensions: 224748
Number of successful extensions: 5446
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4205
Number of HSP's successfully gapped: 532
Length of query: 1030
Length of database: 2,407,596
Length adjustment: 94
Effective length of query: 936
Effective length of database: 1,116,976
Effective search space: 1045489536
Effective search space used: 1045489536
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (27.0 bits)