Your job contains 1 sequence.
>psy6286
MSLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILTINDKLELARHIA
RISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRCMRRLEEV
LRQLVQASRNIGNTLLEEKFNEAIKTVKRDIFLEILENL
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6286
(159 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
RGD|1305984 - symbol:Skiv2l2 "superkiller viralicidic act... 332 2.3e-46 2
FB|FBgn0001986 - symbol:l(2)35Df "lethal (2) 35Df" specie... 361 9.0e-45 2
UNIPROTKB|E2RCI5 - symbol:SKIV2L2 "Uncharacterized protei... 337 2.0e-44 2
ZFIN|ZDB-GENE-040426-2854 - symbol:skiv2l2 "superkiller v... 339 3.1e-44 2
UNIPROTKB|F5H7E2 - symbol:SKIV2L2 "Superkiller viralicidi... 332 4.7e-44 2
MGI|MGI:1919448 - symbol:Skiv2l2 "superkiller viralicidic... 332 6.8e-44 2
UNIPROTKB|P42285 - symbol:SKIV2L2 "Superkiller viralicidi... 332 6.8e-44 2
UNIPROTKB|F1SLL6 - symbol:SKIV2L2 "Uncharacterized protei... 332 1.8e-43 2
UNIPROTKB|F1N993 - symbol:F1N993 "Uncharacterized protein... 320 1.3e-42 2
UNIPROTKB|D4AE49 - symbol:D4AE49 "Uncharacterized protein... 332 8.8e-35 2
WB|WBGene00012342 - symbol:mtr-4 species:6239 "Caenorhabd... 279 1.4e-34 2
UNIPROTKB|F1MAH7 - symbol:F1MAH7 "Uncharacterized protein... 332 1.5e-34 2
TAIR|locus:2026001 - symbol:MTR4 "homolog of yeast MTR4" ... 263 3.9e-33 2
DICTYBASE|DDB_G0275633 - symbol:DDB_G0275633 "superkiller... 246 1.2e-28 2
UNIPROTKB|G4NH56 - symbol:MGG_03931 "FRQ-interacting RNA ... 234 6.4e-28 2
CGD|CAL0003794 - symbol:orf19.1335 species:5476 "Candida ... 240 1.1e-26 2
POMBASE|SPAC6F12.16c - symbol:mtr4 "ATP-dependent RNA hel... 308 3.6e-26 1
TAIR|locus:2063648 - symbol:HEN2 "hua enhancer 2" species... 227 4.7e-24 2
ASPGD|ASPL0000070749 - symbol:mtr4 species:162425 "Emeric... 253 2.5e-20 1
SGD|S000003586 - symbol:MTR4 "ATP-dependent 3'-5' RNA hel... 253 2.5e-20 1
ZFIN|ZDB-GENE-010430-5 - symbol:skiv2l "superkiller viral... 196 2.3e-19 2
POMBASE|SPAC17H9.02 - symbol:SPAC17H9.02 "TRAMP complex A... 236 1.5e-18 1
UNIPROTKB|H0YAC4 - symbol:SKIV2L2 "Superkiller viralicidi... 216 9.5e-18 1
TAIR|locus:2075566 - symbol:AT3G46960 species:3702 "Arabi... 169 2.8e-17 2
ASPGD|ASPL0000004985 - symbol:AN6007 species:162425 "Emer... 166 1.7e-16 2
CGD|CAL0002171 - symbol:orf19.6425 species:5476 "Candida ... 159 1.1e-15 2
UNIPROTKB|F5H6Y7 - symbol:SKIV2L "Helicase SKI2W" species... 142 1.3e-15 2
UNIPROTKB|E2RSD6 - symbol:SKIV2L "Uncharacterized protein... 145 1.4e-15 2
UNIPROTKB|F5H7B0 - symbol:SKIV2L "Helicase SKI2W" species... 142 2.0e-15 2
UNIPROTKB|F8VS23 - symbol:SKIV2L "Helicase SKI2W" species... 142 2.0e-15 2
UNIPROTKB|B4DM01 - symbol:SKIV2L "cDNA FLJ57529, highly s... 142 2.2e-15 2
UNIPROTKB|F8VNU1 - symbol:SKIV2L "Helicase SKI2W" species... 142 2.2e-15 2
UNIPROTKB|F1LP39 - symbol:Skiv2l "Protein Skiv2l" species... 142 2.8e-15 2
RGD|1303059 - symbol:Skiv2l "superkiller viralicidic acti... 142 3.0e-15 2
UNIPROTKB|Q15477 - symbol:SKIV2L "Helicase SKI2W" species... 142 3.0e-15 2
UNIPROTKB|F1RQW4 - symbol:SKIV2L "Uncharacterized protein... 142 3.0e-15 2
UNIPROTKB|E1BMS0 - symbol:LOC100139548 "Uncharacterized p... 138 7.9e-15 2
FB|FBgn0039117 - symbol:tst "twister" species:7227 "Droso... 142 9.0e-15 2
GENEDB_PFALCIPARUM|PFF0100w - symbol:PFF0100w "putative A... 175 3.1e-13 2
DICTYBASE|DDB_G0277211 - symbol:DDB_G0277211 "superkiller... 175 7.2e-12 1
UNIPROTKB|F1MJX4 - symbol:SKIV2L2 "Uncharacterized protei... 167 3.2e-11 1
SGD|S000004390 - symbol:SKI2 "Ski complex component and p... 139 3.6e-11 2
WB|WBGene00008502 - symbol:skih-2 species:6239 "Caenorhab... 158 4.2e-10 1
POMBASE|SPCC550.03c - symbol:SPCC550.03c "Ski complex RNA... 157 5.1e-10 1
UNIPROTKB|H7C4L3 - symbol:SKIV2L "Helicase SKI2W" species... 92 1.5e-05 2
>RGD|1305984 [details] [associations]
symbol:Skiv2l2 "superkiller viralicidic activity 2-like 2 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000460
"maturation of 5.8S rRNA" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0000178 "exosome (RNase complex)" evidence=ISO]
InterPro:IPR012961 Pfam:PF08148 RGD:1305984 GO:GO:0005524
GO:GO:0016818 eggNOG:COG4581 HOGENOM:HOG000163047
InterPro:IPR025696 Pfam:PF13234 OrthoDB:EOG4D52WW IPI:IPI00372914
EMBL:BC091305 UniGene:Rn.145315 STRING:Q5BJW0 InParanoid:Q5BJW0
Genevestigator:Q5BJW0 Uniprot:Q5BJW0
Length = 337
Score = 332 (121.9 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 62/115 (53%), Positives = 85/115 (73%)
Query: 37 ELSKSEETVILTINDKLELARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASF 96
E+ K E + + E A+ IA++S E+KL++DE++Y++ FKP LMDVV+ W GA+F
Sbjct: 215 EMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVYTWATGATF 274
Query: 97 LKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+C +TD+FEGSIIRCMRRLEE+LRQ+ QA++ IGNT LE KF E I +KRDI
Sbjct: 275 AHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDI 329
Score = 171 (65.3 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 33/47 (70%), Positives = 43/47 (91%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
++L M+ELKCRKRVLRRLG+AT +DVIEMKGRVACE+S ++E ++LT
Sbjct: 139 TVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADE-LLLT 184
>FB|FBgn0001986 [details] [associations]
symbol:l(2)35Df "lethal (2) 35Df" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG4581 GeneTree:ENSGT00690000102230 KO:K12598
OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:AF145638
RefSeq:NP_524929.1 UniGene:Dm.1748 SMR:Q9Y134 MINT:MINT-942655
STRING:Q9Y134 EnsemblMetazoa:FBtr0080760 GeneID:48782
KEGG:dme:Dmel_CG4152 UCSC:CG4152-RA FlyBase:FBgn0001986
InParanoid:Q9Y134 OrthoDB:EOG4K3JB5 GenomeRNAi:48782 NextBio:839548
Uniprot:Q9Y134
Length = 1055
Score = 361 (132.1 bits), Expect = 9.0e-45, Sum P(2) = 9.0e-45
Identities = 69/98 (70%), Positives = 84/98 (85%)
Query: 54 ELARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRC 113
+LAR IA++S E KLDLD D+YV++FKP LMDVV AWC+G+SFL VC +TDIFEGSIIRC
Sbjct: 950 DLARRIAKVSTECKLDLDADTYVDKFKPFLMDVVLAWCKGSSFLAVCKMTDIFEGSIIRC 1009
Query: 114 MRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
MRRLEE+LRQ+ QAS+ IGNT LE KF+E I+ +KRDI
Sbjct: 1010 MRRLEELLRQMCQASKTIGNTDLENKFSEGIRLLKRDI 1047
Score = 150 (57.9 bits), Expect = 9.0e-45, Sum P(2) = 9.0e-45
Identities = 30/45 (66%), Positives = 36/45 (80%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVI 46
SLL M+ELK RKRVLRR+GY DVIE KGRVACELS ++E ++
Sbjct: 857 SLLQMDELKHRKRVLRRMGYCKPGDVIEFKGRVACELSSADELLM 901
>UNIPROTKB|E2RCI5 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102230 KO:K12598 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 CTD:23517 EMBL:AAEX03001437
RefSeq:XP_849676.1 Ensembl:ENSCAFT00000010985 GeneID:607950
KEGG:cfa:607950 Uniprot:E2RCI5
Length = 1042
Score = 337 (123.7 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 63/115 (54%), Positives = 85/115 (73%)
Query: 37 ELSKSEETVILTINDKLELARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASF 96
E+ K E + + E A+ IA++S E+KL++DE++Y+N FKP LMDVV+ W GA+F
Sbjct: 920 EMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLNSFKPHLMDVVYTWATGATF 979
Query: 97 LKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+C +TD+FEGSIIRCMRRLEE+LRQ+ QA++ IGNT LE KF E I +KRDI
Sbjct: 980 AHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDI 1034
Score = 171 (65.3 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 33/47 (70%), Positives = 43/47 (91%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
++L M+ELKCRKRVLRRLG+AT +DVIEMKGRVACE+S ++E ++LT
Sbjct: 844 TVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADE-LLLT 889
>ZFIN|ZDB-GENE-040426-2854 [details] [associations]
symbol:skiv2l2 "superkiller viralicidic activity
2-like 2" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0031101 "fin regeneration"
evidence=IMP] [GO:0051781 "positive regulation of cell division"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2854 GO:GO:0005524 GO:GO:0051781 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031101
GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047 KO:K12598
InterPro:IPR025696 Pfam:PF13234 CTD:23517 HOVERGEN:HBG104255
OrthoDB:EOG4D52WW EMBL:BC061456 IPI:IPI00481753 RefSeq:NP_999933.1
UniGene:Dr.75715 ProteinModelPortal:Q6P7X6 STRING:Q6P7X6
PRIDE:Q6P7X6 GeneID:406795 KEGG:dre:406795 NextBio:20818305
Bgee:Q6P7X6 Uniprot:Q6P7X6
Length = 1034
Score = 339 (124.4 bits), Expect = 3.1e-44, Sum P(2) = 3.1e-44
Identities = 65/117 (55%), Positives = 87/117 (74%)
Query: 35 ACELSKSEETVILTINDKLELARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGA 94
A E+ K E + + E A+ IA++S E+KL++DEDSY+NQF+P LMDVV+ W G+
Sbjct: 910 ANEMPKLTEQLGGPLRQMQECAKRIAKVSAEAKLEVDEDSYLNQFRPHLMDVVYTWANGS 969
Query: 95 SFLKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
SF ++C +TD+FEGSIIRCMRRLEE+LRQ+ QA++ IGNT LE KF I +KRDI
Sbjct: 970 SFSQICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFATGITKIKRDI 1026
Score = 167 (63.8 bits), Expect = 3.1e-44, Sum P(2) = 3.1e-44
Identities = 33/47 (70%), Positives = 41/47 (87%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
++L M+ELKCRKRVLRRLG+AT +DVIEMKGRVACE S +E ++LT
Sbjct: 836 TVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACETSSGDE-LLLT 881
>UNIPROTKB|F5H7E2 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:18734 ChiTaRS:SKIV2L2 EMBL:AC010480
EMBL:AC020728 IPI:IPI01011073 ProteinModelPortal:F5H7E2 SMR:F5H7E2
Ensembl:ENST00000545714 UCSC:uc011cqi.2 ArrayExpress:F5H7E2
Bgee:F5H7E2 Uniprot:F5H7E2
Length = 941
Score = 332 (121.9 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 62/115 (53%), Positives = 85/115 (73%)
Query: 37 ELSKSEETVILTINDKLELARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASF 96
E+ K E + + E A+ IA++S E+KL++DE++Y++ FKP LMDVV+ W GA+F
Sbjct: 819 EMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVYTWATGATF 878
Query: 97 LKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+C +TD+FEGSIIRCMRRLEE+LRQ+ QA++ IGNT LE KF E I +KRDI
Sbjct: 879 AHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDI 933
Score = 171 (65.3 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 33/47 (70%), Positives = 43/47 (91%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
++L M+ELKCRKRVLRRLG+AT +DVIEMKGRVACE+S ++E ++LT
Sbjct: 743 TVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADE-LLLT 788
>MGI|MGI:1919448 [details] [associations]
symbol:Skiv2l2 "superkiller viralicidic activity 2-like 2
(S. cerevisiae)" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000460 "maturation of 5.8S
rRNA" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919448 GO:GO:0005524
GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 KO:K12598
OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 CTD:23517
HOVERGEN:HBG104255 OrthoDB:EOG4D52WW ChiTaRS:SKIV2L2 EMBL:AK012158
EMBL:BC029230 IPI:IPI00113134 RefSeq:NP_082427.1 UniGene:Mm.291029
ProteinModelPortal:Q9CZU3 SMR:Q9CZU3 IntAct:Q9CZU3 STRING:Q9CZU3
PhosphoSite:Q9CZU3 PaxDb:Q9CZU3 PRIDE:Q9CZU3
Ensembl:ENSMUST00000022281 GeneID:72198 KEGG:mmu:72198
UCSC:uc007rws.1 InParanoid:Q9CZU3 NextBio:335677 Bgee:Q9CZU3
Genevestigator:Q9CZU3 GermOnline:ENSMUSG00000016018 Uniprot:Q9CZU3
Length = 1040
Score = 332 (121.9 bits), Expect = 6.8e-44, Sum P(2) = 6.8e-44
Identities = 62/115 (53%), Positives = 85/115 (73%)
Query: 37 ELSKSEETVILTINDKLELARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASF 96
E+ K E + + E A+ IA++S E+KL++DE++Y++ FKP LMDVV+ W GA+F
Sbjct: 918 EMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVYTWATGATF 977
Query: 97 LKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+C +TD+FEGSIIRCMRRLEE+LRQ+ QA++ IGNT LE KF E I +KRDI
Sbjct: 978 AHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDI 1032
Score = 171 (65.3 bits), Expect = 6.8e-44, Sum P(2) = 6.8e-44
Identities = 33/47 (70%), Positives = 43/47 (91%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
++L M+ELKCRKRVLRRLG+AT +DVIEMKGRVACE+S ++E ++LT
Sbjct: 842 TVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADE-LLLT 887
>UNIPROTKB|P42285 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0000178 "exosome (RNase complex)"
evidence=IDA] [GO:0000460 "maturation of 5.8S rRNA" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047
KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:D29641
EMBL:BX640789 EMBL:BC014669 EMBL:BC028604 EMBL:BC031779
EMBL:BC065258 EMBL:BC104996 EMBL:BC113509 IPI:IPI00647217
RefSeq:NP_056175.3 UniGene:Hs.274531 ProteinModelPortal:P42285
SMR:P42285 IntAct:P42285 STRING:P42285 PhosphoSite:P42285
DMDM:71153172 SWISS-2DPAGE:P42285 PaxDb:P42285 PeptideAtlas:P42285
PRIDE:P42285 DNASU:23517 Ensembl:ENST00000230640 GeneID:23517
KEGG:hsa:23517 UCSC:uc003jpy.4 CTD:23517 GeneCards:GC05P054605
HGNC:HGNC:18734 HPA:HPA037379 neXtProt:NX_P42285
PharmGKB:PA134901921 HOVERGEN:HBG104255 InParanoid:P42285
OrthoDB:EOG4D52WW PhylomeDB:P42285 ChiTaRS:SKIV2L2 GenomeRNAi:23517
NextBio:45957 ArrayExpress:P42285 Bgee:P42285 CleanEx:HS_SKIV2L2
Genevestigator:P42285 GermOnline:ENSG00000039123 Uniprot:P42285
Length = 1042
Score = 332 (121.9 bits), Expect = 6.8e-44, Sum P(2) = 6.8e-44
Identities = 62/115 (53%), Positives = 85/115 (73%)
Query: 37 ELSKSEETVILTINDKLELARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASF 96
E+ K E + + E A+ IA++S E+KL++DE++Y++ FKP LMDVV+ W GA+F
Sbjct: 920 EMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVYTWATGATF 979
Query: 97 LKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+C +TD+FEGSIIRCMRRLEE+LRQ+ QA++ IGNT LE KF E I +KRDI
Sbjct: 980 AHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDI 1034
Score = 171 (65.3 bits), Expect = 6.8e-44, Sum P(2) = 6.8e-44
Identities = 33/47 (70%), Positives = 43/47 (91%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
++L M+ELKCRKRVLRRLG+AT +DVIEMKGRVACE+S ++E ++LT
Sbjct: 844 TVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADE-LLLT 889
>UNIPROTKB|F1SLL6 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:FP236391 EMBL:CU929534 Ensembl:ENSSSCT00000018417
Uniprot:F1SLL6
Length = 1046
Score = 332 (121.9 bits), Expect = 1.8e-43, Sum P(2) = 1.8e-43
Identities = 62/115 (53%), Positives = 85/115 (73%)
Query: 37 ELSKSEETVILTINDKLELARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASF 96
E+ K E + + E A+ IA++S E+KL++DE++Y++ FKP LMDVV+ W GA+F
Sbjct: 924 EMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVYTWATGATF 983
Query: 97 LKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+C +TD+FEGSIIRCMRRLEE+LRQ+ QA++ IGNT LE KF E I +KRDI
Sbjct: 984 AHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDI 1038
Score = 167 (63.8 bits), Expect = 1.8e-43, Sum P(2) = 1.8e-43
Identities = 33/49 (67%), Positives = 43/49 (87%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSK--SEETVILT 48
++L M+ELKCRKRVLRRLG+AT +DVIEMKGRVACE+S+ S + ++LT
Sbjct: 845 TVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISRWYSADELLLT 893
>UNIPROTKB|F1N993 [details] [associations]
symbol:F1N993 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000178 "exosome (RNase
complex)" evidence=IEA] [GO:0000460 "maturation of 5.8S rRNA"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 GO:GO:0000178 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000460
GO:GO:0008026 GeneTree:ENSGT00690000102230 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 EMBL:AADN02054537 EMBL:AADN02054530
EMBL:AADN02054531 EMBL:AADN02054532 EMBL:AADN02054533
EMBL:AADN02054534 EMBL:AADN02054535 EMBL:AADN02054536
IPI:IPI00599020 Ensembl:ENSGALT00000023719 Uniprot:F1N993
Length = 1031
Score = 320 (117.7 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 61/112 (54%), Positives = 83/112 (74%)
Query: 37 ELSKSEETVILTINDKLELARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASF 96
E+ K E + + E A+ IAR+S E+KL++DE++Y+N F+P+LMDVV+ W GASF
Sbjct: 909 EMPKLTEQLAGPLRQMQECAKRIARVSAEAKLEIDEENYLNSFRPNLMDVVYTWANGASF 968
Query: 97 LKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVK 148
+C +TD+FEGSIIRCMRRLEE+LRQ+ QA++ IGNT LE KF E +T K
Sbjct: 969 AHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEG-RTYK 1019
Score = 171 (65.3 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 33/47 (70%), Positives = 43/47 (91%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
++L M+ELKCRKRVLRRLG+AT +DVIEMKGRVACE+S ++E ++LT
Sbjct: 833 TVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADE-LLLT 878
>UNIPROTKB|D4AE49 [details] [associations]
symbol:D4AE49 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR012961 Pfam:PF00271 Pfam:PF08148 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00690000102230 InterPro:IPR025696 Pfam:PF13234
IPI:IPI00776783 PRIDE:D4AE49 Ensembl:ENSRNOT00000060695
ArrayExpress:D4AE49 Uniprot:D4AE49
Length = 764
Score = 332 (121.9 bits), Expect = 8.8e-35, Sum P(2) = 8.8e-35
Identities = 62/115 (53%), Positives = 85/115 (73%)
Query: 37 ELSKSEETVILTINDKLELARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASF 96
E+ K E + + E A+ IA++S E+KL++DE++Y++ FKP LMDVV+ W GA+F
Sbjct: 642 EMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVYTWATGATF 701
Query: 97 LKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+C +TD+FEGSIIRCMRRLEE+LRQ+ QA++ IGNT LE KF E I +KRDI
Sbjct: 702 AHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDI 756
Score = 79 (32.9 bits), Expect = 8.8e-35, Sum P(2) = 8.8e-35
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
++L M+ELKCRK L R G A D+I KG C S ++E ++LT
Sbjct: 566 TVLQMDELKCRKPCLFRPGKAFLLDLIHRKGYHFCYKSCADE-LLLT 611
>WB|WBGene00012342 [details] [associations]
symbol:mtr-4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0040011 InterPro:IPR018247
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0040020 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0040022 GO:GO:0008026 eggNOG:COG4581 EMBL:Z70271 PIR:T26282
RefSeq:NP_501757.1 ProteinModelPortal:Q23223 SMR:Q23223
MINT:MINT-6670291 STRING:Q23223 PaxDb:Q23223 EnsemblMetazoa:W08D2.7
GeneID:177824 KEGG:cel:CELE_W08D2.7 CTD:177824 WormBase:W08D2.7
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 InParanoid:Q23223
KO:K12598 OMA:ENFQKAM NextBio:898538 InterPro:IPR025696
Pfam:PF13234 Uniprot:Q23223
Length = 1026
Score = 279 (103.3 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 53/116 (45%), Positives = 80/116 (68%)
Query: 36 CELSKSEETVILTINDKLELARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGAS 95
C K + +++ E AR++A++S E K+++ ED YV+ F P LMDVV+ W GA+
Sbjct: 903 CAAPKLATELQTCLSELHEQARNVAKVSNECKMEVMEDKYVSSFNPGLMDVVYQWVNGAT 962
Query: 96 FLKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
F ++ TD+FEGSIIR +RRLEEVLR+++ A++ + N LE+KF +A K +KRDI
Sbjct: 963 FSEIVKTTDVFEGSIIRTLRRLEEVLREMINAAKALANKELEQKFEDARKNLKRDI 1018
Score = 136 (52.9 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 30/47 (63%), Positives = 35/47 (74%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
S LH+EEL RKRVLRRLGY D + +KG VACELS S+E +ILT
Sbjct: 829 STLHLEELNNRKRVLRRLGYLGNDDALVLKGSVACELSASDE-LILT 874
>UNIPROTKB|F1MAH7 [details] [associations]
symbol:F1MAH7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 IPI:IPI00372914 PRIDE:F1MAH7
Ensembl:ENSRNOT00000013683 ArrayExpress:F1MAH7 Uniprot:F1MAH7
Length = 1046
Score = 332 (121.9 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 62/115 (53%), Positives = 85/115 (73%)
Query: 37 ELSKSEETVILTINDKLELARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASF 96
E+ K E + + E A+ IA++S E+KL++DE++Y++ FKP LMDVV+ W GA+F
Sbjct: 924 EMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVYTWATGATF 983
Query: 97 LKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+C +TD+FEGSIIRCMRRLEE+LRQ+ QA++ IGNT LE KF E I +KRDI
Sbjct: 984 AHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDI 1038
Score = 82 (33.9 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
++L M+ELKCRK R+L + +D ++K RV+ + S + ++LT
Sbjct: 847 TVLQMDELKCRKPCTRKLIFKITSDEKQLKHRVSLTVHSSADELLLT 893
>TAIR|locus:2026001 [details] [associations]
symbol:MTR4 "homolog of yeast MTR4" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IMP]
[GO:0031125 "rRNA 3'-end processing" evidence=IMP] [GO:0000398
"mRNA splicing, via spliceosome" evidence=RCA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0010074 "maintenance of
meristem identity" evidence=RCA] [GO:0010212 "response to ionizing
radiation" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0030422 "production of
siRNA involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
EMBL:AC007258 UniGene:At.74832 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0031125 eggNOG:COG4581
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:AK176836 IPI:IPI00536033 PIR:E96621
RefSeq:NP_176185.1 UniGene:At.43462 ProteinModelPortal:Q9XIF2
SMR:Q9XIF2 PaxDb:Q9XIF2 PRIDE:Q9XIF2 EnsemblPlants:AT1G59760.1
GeneID:842269 KEGG:ath:AT1G59760 TAIR:At1g59760 InParanoid:Q9XIF2
PhylomeDB:Q9XIF2 ProtClustDB:CLSN2679700 ArrayExpress:Q9XIF2
Genevestigator:Q9XIF2 Uniprot:Q9XIF2
Length = 988
Score = 263 (97.6 bits), Expect = 3.9e-33, Sum P(2) = 3.9e-33
Identities = 47/115 (40%), Positives = 78/115 (67%)
Query: 37 ELSKSEETVILTINDKLELARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASF 96
+ +K E + L + AR +A + ++ K+++D +S+V F+P +M+ V+AW +G+ F
Sbjct: 866 DAAKPREELDLLFIQLQDTARRVAEVQLDCKVEIDVESFVQSFRPDIMEAVYAWAKGSKF 925
Query: 97 LKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+V I +FEGS+IR +RR+EEVL+QL+ A+++IG T LE K EA+ +KRDI
Sbjct: 926 YEVMEIARVFEGSLIRAIRRMEEVLQQLIVAAKSIGETQLEAKLEEAVSKIKRDI 980
Score = 138 (53.6 bits), Expect = 3.9e-33, Sum P(2) = 3.9e-33
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVI 46
+L +ELK RKRVLRRLGY T +V+E+KG+VACE+S +EE +
Sbjct: 790 ALAFKDELKARKRVLRRLGYITSDNVVELKGKVACEISSAEELTL 834
>DICTYBASE|DDB_G0275633 [details] [associations]
symbol:DDB_G0275633 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275633 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 KO:K12598 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_643574.1
ProteinModelPortal:Q86IE2 STRING:Q86IE2 EnsemblProtists:DDB0233453
GeneID:8620161 KEGG:ddi:DDB_G0275633 InParanoid:Q86IE2
ProtClustDB:CLSZ2444279 Uniprot:Q86IE2
Length = 1128
Score = 246 (91.7 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 49/99 (49%), Positives = 69/99 (69%)
Query: 54 ELARHIARISIESKL-DLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIR 112
+ A + +S E KL +DE +Y+ F P+ MDV AW GASF + +TD FEG++IR
Sbjct: 1022 DTASKVVTVSQECKLTSVDEKTYLASFNPNFMDVTFAWASGASFADIVKMTDTFEGNLIR 1081
Query: 113 CMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+RRL+E++RQ+V AS++IGNT LE KF+EA +KRDI
Sbjct: 1082 GIRRLDELIRQMVIASKSIGNTELEAKFSEATVKIKRDI 1120
Score = 114 (45.2 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 7 EELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVI 46
++L+ KR+L RLGY T+ V+ +KGRVACE+S +E VI
Sbjct: 929 DDLRSMKRILTRLGYITDDGVVALKGRVACEISAGDELVI 968
>UNIPROTKB|G4NH56 [details] [associations]
symbol:MGG_03931 "FRQ-interacting RNA helicase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0031499 GO:GO:0043629
GO:GO:0071035 GO:GO:0071038 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000467 GO:GO:0071042
GO:GO:0071051 GO:GO:0008143 GO:GO:0034459 GO:GO:0034475
GO:GO:0034476 KO:K12598 InterPro:IPR025696 Pfam:PF13234
GO:GO:0071049 RefSeq:XP_003719933.1 EnsemblFungi:MGG_03931T0
GeneID:2677161 KEGG:mgr:MGG_03931 Uniprot:G4NH56
Length = 1102
Score = 234 (87.4 bits), Expect = 6.4e-28, Sum P(2) = 6.4e-28
Identities = 49/117 (41%), Positives = 77/117 (65%)
Query: 40 KSEETVILTINDKL--EL---ARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGA 94
K E T + DKL E+ A+ IARIS ESKLD+ ++ V K L + V AW +G
Sbjct: 978 KMEGTPLKEDLDKLVREIHAQAKTIARISRESKLDVSDEQVVGNLKWQLTETVLAWAKGR 1037
Query: 95 SFLKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
F ++C +T+ +EGS++R MRRLEE+LRQ+ +A + +G+ +L++KF +A+ + RD+
Sbjct: 1038 PFAEICKMTNAYEGSLVRIMRRLEELLRQMAEAGKVMGSEMLQKKFEKALSLISRDV 1094
Score = 119 (46.9 bits), Expect = 6.4e-28, Sum P(2) = 6.4e-28
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSE--ETVI 46
S+ ++ELK R RVLRRL + E +V++MK RVACE+S +E E VI
Sbjct: 903 SIAQLDELKSRMRVLRRLNFINENEVVQMKARVACEISSTEGHELVI 949
>CGD|CAL0003794 [details] [associations]
symbol:orf19.1335 species:5476 "Candida albicans" [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0034459 "ATP-dependent
3'-5' RNA helicase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IEA] [GO:0034476
"U5 snRNA 3'-end processing" evidence=IEA] [GO:0071049 "nuclear
retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IEA] [GO:0000467 "exonucleolytic trimming
to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IEA] [GO:0043629 "ncRNA polyadenylation"
evidence=IEA] [GO:0071051 "polyadenylation-dependent snoRNA 3'-end
processing" evidence=IEA] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IEA]
[GO:0071038 "nuclear polyadenylation-dependent tRNA catabolic
process" evidence=IEA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003794 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581
EMBL:AACQ01000188 EMBL:AACQ01000187 KO:K12598 InterPro:IPR025696
Pfam:PF13234 RefSeq:XP_711657.1 RefSeq:XP_711675.1
RefSeq:XP_888948.1 STRING:Q59PN6 GeneID:3646717 GeneID:3646739
GeneID:3703907 KEGG:cal:CaO19.1335 KEGG:cal:CaO19.8915
KEGG:cal:CaO19_1335 Uniprot:Q59PN6
Length = 1106
Score = 240 (89.5 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 48/102 (47%), Positives = 71/102 (69%)
Query: 54 ELARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRC 113
E A IA+IS +S L++ E Y+ QF +L++VV W GASF +C +TDI+EGSIIR
Sbjct: 1001 ETANKIAKISKQSGLEIVEKDYIEQFNLALVEVVFVWSNGASFSSICKMTDIYEGSIIRA 1060
Query: 114 MRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDIFLEI 155
+RR E+++QLV AS+ IGN L +KF + I+ + RD F+++
Sbjct: 1061 LRREIELIKQLVDASKIIGNQELVDKFEKCIELINRD-FVQV 1101
Score = 101 (40.6 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVI 46
S++ +++L KRVL++L + +V+E+KGRVA ELS +E +I
Sbjct: 908 SIIQLDQLSNMKRVLKKLEFTGSEEVVELKGRVAAELSTGDELMI 952
>POMBASE|SPAC6F12.16c [details] [associations]
symbol:mtr4 "ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0016078 "tRNA catabolic process" evidence=ISO]
[GO:0031499 "TRAMP complex" evidence=IDA] [GO:0043630 "ncRNA
polyadenylation involved in polyadenylation-dependent ncRNA
catabolic process" evidence=ISO] [GO:0071049 "nuclear retention of
pre-mRNA with aberrant 3'-ends at the site of transcription"
evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
PomBase:SPAC6F12.16c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GO:GO:0003676 GO:GO:0031499 GO:GO:0043630 GO:GO:0016078
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696
Pfam:PF13234 EMBL:AB027847 PIR:T11667 RefSeq:NP_593302.1
ProteinModelPortal:O14232 STRING:O14232 EnsemblFungi:SPAC6F12.16c.1
GeneID:2541639 KEGG:spo:SPAC6F12.16c OMA:DDRISAD OrthoDB:EOG4S1XG7
NextBio:20802732 GO:GO:0071049 Uniprot:O14232
Length = 1117
Score = 308 (113.5 bits), Expect = 3.6e-26, P = 3.6e-26
Identities = 62/125 (49%), Positives = 87/125 (69%)
Query: 27 VIEMKGRVACELSKSEETVILTINDKLELARHIARISIESKLDLDEDSYVNQFKPSLMDV 86
V + K V + K E L I E+AR IA++S ESK +L+E+ YVN FKPSLM+V
Sbjct: 987 VFQEKSEVENQRMKEELAGPLKILQ--EMARRIAKVSKESKQELNEEEYVNSFKPSLMEV 1044
Query: 87 VHAWCEGASFLKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKT 146
V+AW GASF ++C +TD++EGS+IR RRLEE++RQ+V A++ IGNT L++K + I
Sbjct: 1045 VYAWAHGASFAQICKMTDVYEGSLIRMFRRLEELIRQMVDAAKVIGNTSLQQKMEDTIAC 1104
Query: 147 VKRDI 151
+ RDI
Sbjct: 1105 IHRDI 1109
Score = 138 (53.6 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 28/47 (59%), Positives = 38/47 (80%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
S++ ++EL RKRVLRRLG+ T DVIE+KGRVACE+S S + ++LT
Sbjct: 918 SIMQLDELNSRKRVLRRLGFTTSDDVIEVKGRVACEIS-SGDGLLLT 963
>TAIR|locus:2063648 [details] [associations]
symbol:HEN2 "hua enhancer 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0010093
"specification of floral organ identity" evidence=IMP] [GO:0016070
"RNA metabolic process" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=RCA]
[GO:0003002 "regionalization" evidence=RCA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0030422 "production of siRNA involved in
RNA interference" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0003676 GO:GO:0010093
GO:GO:0016070 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AC005171 GO:GO:0003724 HOGENOM:HOG000163047
KO:K12598 InterPro:IPR025696 Pfam:PF13234 EMBL:BT005794
IPI:IPI00539432 PIR:B84481 RefSeq:NP_565338.1 UniGene:At.20667
ProteinModelPortal:Q9ZVW2 SMR:Q9ZVW2 IntAct:Q9ZVW2 PRIDE:Q9ZVW2
EnsemblPlants:AT2G06990.1 GeneID:815269 KEGG:ath:AT2G06990
TAIR:At2g06990 InParanoid:Q9ZVW2 OMA:TFDRVCD PhylomeDB:Q9ZVW2
ProtClustDB:CLSN2688028 ArrayExpress:Q9ZVW2 Genevestigator:Q9ZVW2
Uniprot:Q9ZVW2
Length = 995
Score = 227 (85.0 bits), Expect = 4.7e-24, Sum P(2) = 4.7e-24
Identities = 47/97 (48%), Positives = 66/97 (68%)
Query: 56 ARHIARISIESKLDLDEDSYVNQ-FKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRCM 114
AR IA I E KL++D + YV +P LMDV+++W +GASF ++ +TDIFEGSIIR
Sbjct: 891 ARKIAEIQHECKLEIDVEEYVESTIRPFLMDVIYSWSKGASFAEIIQMTDIFEGSIIRSA 950
Query: 115 RRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
RRL+E L QL A+ +G + LE KF A ++++R I
Sbjct: 951 RRLDEFLNQLRAAAEAVGESSLESKFAAASESLRRGI 987
Score = 88 (36.0 bits), Expect = 4.7e-24, Sum P(2) = 4.7e-24
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 7 EELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVI 46
+ELK R RVL++LG+ V+++KGR AC + +E ++
Sbjct: 801 DELKNRSRVLKKLGHIDADGVVQVKGRAACLIDTGDELLV 840
Score = 41 (19.5 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 21 YATEADVIEMKGRVACELSKSEETV-ILTINDKLEL 55
Y + I+M GR A K E + I+ I++++E+
Sbjct: 461 YIGSGEYIQMSGR-AGRRGKDERGICIIMIDEQMEM 495
>ASPGD|ASPL0000070749 [details] [associations]
symbol:mtr4 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0031499 "TRAMP
complex" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:BN001303
GO:GO:0031499 GO:GO:0043629 GO:GO:0071035 GO:GO:0071038
EMBL:AACD01000076 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000467 GO:GO:0071042 GO:GO:0071051 GO:GO:0008143
GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475 GO:GO:0034476
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 OrthoDB:EOG4S1XG7 GO:GO:0071049 RefSeq:XP_662016.1
ProteinModelPortal:Q5B4W8 STRING:Q5B4W8
EnsemblFungi:CADANIAT00006045 GeneID:2872204 KEGG:ani:AN4412.2
Uniprot:Q5B4W8
Length = 1073
Score = 253 (94.1 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 54/125 (43%), Positives = 78/125 (62%)
Query: 27 VIEMKGRVACELSKSEETVILTINDKLELARHIARISIESKLDLDEDSYVNQFKPSLMDV 86
V E K + LSK E + + + AR IA+++ ESKL + E+ YV F LM+V
Sbjct: 943 VFEEKTKETPPLSKEE--LAKPLKEIQAQARIIAKVAQESKLAVSEEDYVQSFHWELMEV 1000
Query: 87 VHAWCEGASFLKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKT 146
++ W G SF +C +TD++EGS+IR RRLEE LRQ+ QA++ +G+ LE KF A+
Sbjct: 1001 IYEWANGKSFADICGMTDVYEGSLIRVFRRLEECLRQMAQAAKVMGSEELESKFETALTK 1060
Query: 147 VKRDI 151
V+RDI
Sbjct: 1061 VRRDI 1065
Score = 142 (55.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 24/46 (52%), Positives = 37/46 (80%)
Query: 1 MSLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVI 46
M++ ++ELKCRKRVLRR G+ EA+V+++K RVACE+S +E ++
Sbjct: 873 MAIQQLDELKCRKRVLRRFGFINEAEVVQLKARVACEISTGDELML 918
>SGD|S000003586 [details] [associations]
symbol:MTR4 "ATP-dependent 3'-5' RNA helicase of the DExD/H
family" species:4932 "Saccharomyces cerevisiae" [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IMP] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016075 "rRNA catabolic process" evidence=IMP] [GO:0043629
"ncRNA polyadenylation" evidence=IDA] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IGI;IDA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IMP] [GO:0071031 "nuclear mRNA surveillance of
mRNA 3'-end processing" evidence=IGI;IMP] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0031499 "TRAMP complex" evidence=IDA;IPI] [GO:0008143 "poly(A)
RNA binding" evidence=IDA] [GO:0034459 "ATP-dependent 3'-5' RNA
helicase activity" evidence=IMP;IDA] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0071049
"nuclear retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IGI] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0071051
"polyadenylation-dependent snoRNA 3'-end processing" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011254 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
SGD:S000003586 GO:GO:0005524 GO:GO:0005730 EMBL:BK006943
GO:GO:0016491 GO:GO:0031499 GO:GO:0043629 GO:GO:0071035
GO:GO:0071038 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF56821 GO:GO:0000467 GO:GO:0071042 GO:GO:0071051
GO:GO:0008143 GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475
GO:GO:0034476 GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047
KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234
OrthoDB:EOG4S1XG7 GO:GO:0071049 EMBL:Z49325 PIR:S56822
RefSeq:NP_012485.1 PDB:2XGJ PDB:3L9O PDBsum:2XGJ PDBsum:3L9O
ProteinModelPortal:P47047 SMR:P47047 DIP:DIP-6394N IntAct:P47047
MINT:MINT-620894 STRING:P47047 PaxDb:P47047 PeptideAtlas:P47047
EnsemblFungi:YJL050W GeneID:853397 KEGG:sce:YJL050W CYGD:YJL050w
EvolutionaryTrace:P47047 NextBio:973882 Genevestigator:P47047
GermOnline:YJL050W Uniprot:P47047
Length = 1073
Score = 253 (94.1 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 44/98 (44%), Positives = 70/98 (71%)
Query: 54 ELARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRC 113
E+A IA+I +SK+++ E YV F+ LM+VV+ WC GA+F ++C +TD++EGS+IR
Sbjct: 968 EIAAKIAKIMKDSKIEVVEKDYVESFRHELMEVVYEWCRGATFTQICKMTDVYEGSLIRM 1027
Query: 114 MRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+RLEE++++LV + IGN+ L+EK +K + RDI
Sbjct: 1028 FKRLEELVKELVDVANTIGNSSLKEKMEAVLKLIHRDI 1065
Score = 139 (54.0 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 41/127 (32%), Positives = 65/127 (51%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVI--LTINDKL-ELARH 58
+++ +++L+ RKRVLRRLG+ T D+IE+KGRVACE+S +E ++ L N EL
Sbjct: 875 AVIQLDDLRRRKRVLRRLGFCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKPE 934
Query: 59 IARISIESKLDLDEDSYVNQFKPSLMDVVHAWCE-GASFLKVC--SITDIFEGSIIRCMR 115
A + + + KP L + + A E A K+ S ++ E + R
Sbjct: 935 QAAALLSCFAFQERCKEAPRLKPELAEPLKAMREIAAKIAKIMKDSKIEVVEKDYVESFR 994
Query: 116 R-LEEVL 121
L EV+
Sbjct: 995 HELMEVV 1001
>ZFIN|ZDB-GENE-010430-5 [details] [associations]
symbol:skiv2l "superkiller viralicidic activity 2 (S.
cerevisiae homolog)-like" species:7955 "Danio rerio" [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-010430-5 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GeneTree:ENSGT00690000102154 EMBL:FP102194 EMBL:FP067438
IPI:IPI00490616 Ensembl:ENSDART00000089609 OMA:TIMASAD Bgee:F1R881
Uniprot:F1R881
Length = 1249
Score = 196 (74.1 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 37/103 (35%), Positives = 65/103 (63%)
Query: 49 INDKLELARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEG 108
IN L +A+ I + + + + +V QFK L +VV+ W G F ++ +TD+ EG
Sbjct: 1138 INQVLAVAQRIGDLQRDCGIAQTAEDFVAQFKFGLTEVVYCWARGMPFAEIAQLTDVQEG 1197
Query: 109 SIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+I+RC++RL+EVL+++ QA+R +G+++L K A ++RDI
Sbjct: 1198 TIVRCIQRLDEVLKEVRQAARIVGDSVLGSKMERASLAIRRDI 1240
Score = 77 (32.2 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
SL + E R +VL L Y + +++KGRVAC++S E ++LT
Sbjct: 1051 SLTLLPEYHQRIKVLEALQYVDSSGAVQLKGRVACQISSHE--LLLT 1095
>POMBASE|SPAC17H9.02 [details] [associations]
symbol:SPAC17H9.02 "TRAMP complex ATP-dependent RNA
helicase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0016078 "tRNA catabolic
process" evidence=ISO] [GO:0031499 "TRAMP complex" evidence=ISO]
[GO:0043630 "ncRNA polyadenylation involved in
polyadenylation-dependent ncRNA catabolic process" evidence=ISO]
[GO:0071049 "nuclear retention of pre-mRNA with aberrant 3'-ends at
the site of transcription" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC17H9.02 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GO:GO:0003676 GO:GO:0031499
GO:GO:0043630 GO:GO:0016078 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG4581
HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696 Pfam:PF13234
OrthoDB:EOG4S1XG7 GO:GO:0071049 PIR:T37868 RefSeq:NP_593572.1
ProteinModelPortal:O13799 STRING:O13799 EnsemblFungi:SPAC17H9.02.1
GeneID:2542173 KEGG:spo:SPAC17H9.02 OMA:FARWISE NextBio:20803244
Uniprot:O13799
Length = 1030
Score = 236 (88.1 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 52/126 (41%), Positives = 80/126 (63%)
Query: 27 VIEMKGRVAC-ELSKSEETVILTINDKLELARHIARISIESKLDLDEDSYVNQFKPSLMD 85
V E K V+ L + + + LTI +E A+ IA +S+ESKL +E Y++QFKP +M+
Sbjct: 900 VYEDKSEVSTLNLKEPFKKMYLTI---IEAAKRIATVSLESKLQFNESDYLHQFKPDIME 956
Query: 86 VVHAWCEGASFLKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIK 145
V W GASF ++C ++ ++EGSI+R RRL+E+L+QL A+ +GN L+EK +
Sbjct: 957 PVSLWINGASFQEICIVSKLYEGSIVRTFRRLDELLKQLEHAAIVLGNNELKEKSVLTEQ 1016
Query: 146 TVKRDI 151
+ RDI
Sbjct: 1017 KLHRDI 1022
Score = 127 (49.8 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 22/48 (45%), Positives = 38/48 (79%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILTI 49
+++ + ELK R+RVLRRLG+ T +VI++KGRVACE++ +E +++ +
Sbjct: 831 AIIQLRELKIRQRVLRRLGFCTLENVIDIKGRVACEITSGDELLLVEL 878
>UNIPROTKB|H0YAC4 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR012961
Pfam:PF08148 GO:GO:0005524 GO:GO:0016818 HGNC:HGNC:18734
ChiTaRS:SKIV2L2 EMBL:AC010480 EMBL:AC020728 Ensembl:ENST00000508716
Uniprot:H0YAC4
Length = 72
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 40/60 (66%), Positives = 49/60 (81%)
Query: 83 LMDVVHAWCEGASFLKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNE 142
LMDVV+ W GA+F +C +TD+FEGSIIRCMRRLEE+LRQ+ QA++ IGNT LE KF E
Sbjct: 2 LMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAE 61
>TAIR|locus:2075566 [details] [associations]
symbol:AT3G46960 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0005773
"vacuole" evidence=IDA] [GO:0006813 "potassium ion transport"
evidence=IMP] [GO:0035864 "response to potassium ion" evidence=IMP]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005773
EMBL:CP002686 GO:GO:0003676 GO:GO:0006813 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC IPI:IPI00544785
RefSeq:NP_190280.5 UniGene:At.28750 UniGene:At.48743
ProteinModelPortal:F4JAA5 SMR:F4JAA5 PRIDE:F4JAA5
EnsemblPlants:AT3G46960.1 GeneID:823849 KEGG:ath:AT3G46960
GO:GO:0035864 Uniprot:F4JAA5
Length = 1347
Score = 169 (64.5 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 32/99 (32%), Positives = 57/99 (57%)
Query: 54 ELARHIARISIESKLDLDEDSYVNQ-FKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIR 112
+ A + + + L +D + Y + K L++VV+ W +G F ++C +TD+ EG I+R
Sbjct: 1238 DTAIRLGELQAQYNLQIDPEEYAQENLKFGLVEVVYEWAKGTPFAEICELTDVPEGLIVR 1297
Query: 113 CMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+ RL+E R+ A+ +GN+ L +K + A +KRDI
Sbjct: 1298 TIVRLDETCREFKNAAAIMGNSALHKKMDAASNAIKRDI 1336
Score = 85 (35.0 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEE---TVILTIN--DKLELA 56
+LL M + R VL+ +G + V+++KGRVACE++ EE TV L N ++LE
Sbjct: 1145 ALLQMPAFQGRIDVLKNIGCIDDDLVVQIKGRVACEMNSGEELICTVCLFENQFEELEPE 1204
Query: 57 RHIARIS 63
+A +S
Sbjct: 1205 EAVAIMS 1211
>ASPGD|ASPL0000004985 [details] [associations]
symbol:AN6007 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000102 GO:GO:0008026 eggNOG:COG4581
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
RefSeq:XP_663611.1 ProteinModelPortal:Q5B0C3 STRING:Q5B0C3
EnsemblFungi:CADANIAT00007011 GeneID:2871132 KEGG:ani:AN6007.2
Uniprot:Q5B0C3
Length = 1293
Score = 166 (63.5 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 36/114 (31%), Positives = 70/114 (61%)
Query: 38 LSKSEETVILTINDKLELARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFL 97
L K +E +I I++K+ + I ++S D+++ + +Q + L +VV+ W +G SF
Sbjct: 1176 LEKGKEAII-RISEKVNDVQ-IQHQVLQSTEDIND--FASQPRFGLAEVVYEWAKGMSFN 1231
Query: 98 KVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
++ +TD+ EG+I+R + RL+E R++ A++ +G+ L K EA + +KRD+
Sbjct: 1232 RITDLTDVMEGTIVRTITRLDETCREVKNAAKLVGDPTLYAKMQEAQEKIKRDV 1285
Score = 80 (33.2 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 14/35 (40%), Positives = 25/35 (71%)
Query: 12 RKRVLRRLGYATEADVIEMKGRVACELSKSEETVI 46
R +VL+ LG+ E +++KG+VACE+ ++E V+
Sbjct: 1102 RIQVLKDLGFVDEQSRVQLKGKVACEIHSADELVL 1136
>CGD|CAL0002171 [details] [associations]
symbol:orf19.6425 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0055087 "Ski complex" evidence=IEA]
[GO:0070478 "nuclear-transcribed mRNA catabolic process, 3'-5'
exonucleolytic nonsense-mediated decay" evidence=IEA] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0002171 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000073
EMBL:AACQ01000072 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG4581 KO:K12599 RefSeq:XP_716180.1
RefSeq:XP_716263.1 ProteinModelPortal:Q5A337 STRING:Q5A337
GeneID:3642143 GeneID:3642220 KEGG:cal:CaO19.13783
KEGG:cal:CaO19.6425 Uniprot:Q5A337
Length = 1245
Score = 159 (61.0 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 34/101 (33%), Positives = 63/101 (62%)
Query: 53 LELARHIARISIESKLDL--DEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSI 110
LE+A + ++ +E ++ L +E+ +V + +L +VV+ W G SF ++ I+ EG+I
Sbjct: 1137 LEIAEKLLKVYVEKQVSLTSEEEDFVESKRFALANVVYEWANGLSFNEIMQISVEAEGTI 1196
Query: 111 IRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+R + RL+E+ R++ A+ IG++ L K EA + +KRDI
Sbjct: 1197 VRVITRLDEICREVKNAALIIGDSTLHLKMVEAQEKIKRDI 1237
Score = 79 (32.9 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 12 RKRVLRRLGYATEADVIEMKGRVACELSKSEETVI--LTINDKL---ELARHIARIS 63
R +VL +GY E + +KGRVACE++ E +I L +N+ L E A +A +S
Sbjct: 1053 RLQVLEAMGYIDEQHNVVLKGRVACEVNSGWELIITELVLNNFLGDFEPAEIVALLS 1109
>UNIPROTKB|F5H6Y7 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AL844853 EMBL:AL662849 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00946735
SMR:F5H6Y7 Ensembl:ENST00000547025 Ensembl:ENST00000547224
Ensembl:ENST00000547296 Ensembl:ENST00000548561
Ensembl:ENST00000552010 Uniprot:F5H6Y7
Length = 880
Score = 142 (55.0 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 28/97 (28%), Positives = 53/97 (54%)
Query: 55 LARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRCM 114
+A+ I + + L+ + +V + L++VV+ W G F ++ ++ EG ++RC+
Sbjct: 775 VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI 834
Query: 115 RRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+RL E+ R L A+R +G +L K A ++RDI
Sbjct: 835 QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDI 871
Score = 92 (37.4 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
SLL + E R VLR LGY EA +++ GRVAC +S E ++LT
Sbjct: 682 SLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHE--LLLT 726
>UNIPROTKB|E2RSD6 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055087 "Ski complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 KO:K12599 OMA:TRLDETC GeneTree:ENSGT00690000102154
CTD:6499 EMBL:AAEX03008222 RefSeq:XP_538841.2
ProteinModelPortal:E2RSD6 Ensembl:ENSCAFT00000001053 GeneID:481720
KEGG:cfa:481720 NextBio:20856463 Uniprot:E2RSD6
Length = 1246
Score = 145 (56.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 55 LARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRCM 114
+AR I + + L+ + +V + L++VV+ W G F ++ ++ EG ++RC+
Sbjct: 1141 VARRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI 1200
Query: 115 RRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+RL E+ R L A+R +G +L K A ++RDI
Sbjct: 1201 QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDI 1237
Score = 92 (37.4 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
SLL + E R VLR LGY EA +++ GRVAC +S E ++LT
Sbjct: 1048 SLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHE--LLLT 1092
>UNIPROTKB|F5H7B0 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 EMBL:AL645922
InterPro:IPR025696 Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L
IPI:IPI01021910 SMR:F5H7B0 Ensembl:ENST00000544581
Ensembl:ENST00000546549 Uniprot:F5H7B0
Length = 1053
Score = 142 (55.0 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 28/97 (28%), Positives = 53/97 (54%)
Query: 55 LARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRCM 114
+A+ I + + L+ + +V + L++VV+ W G F ++ ++ EG ++RC+
Sbjct: 948 VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI 1007
Query: 115 RRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+RL E+ R L A+R +G +L K A ++RDI
Sbjct: 1008 QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDI 1044
Score = 92 (37.4 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
SLL + E R VLR LGY EA +++ GRVAC +S E ++LT
Sbjct: 855 SLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHE--LLLT 899
>UNIPROTKB|F8VS23 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00945125
SMR:F8VS23 Ensembl:ENST00000546908 Ensembl:ENST00000552714
Ensembl:ENST00000552746 Ensembl:ENST00000553255 UCSC:uc011ghl.1
Uniprot:F8VS23
Length = 1053
Score = 142 (55.0 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 28/97 (28%), Positives = 53/97 (54%)
Query: 55 LARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRCM 114
+A+ I + + L+ + +V + L++VV+ W G F ++ ++ EG ++RC+
Sbjct: 948 VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI 1007
Query: 115 RRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+RL E+ R L A+R +G +L K A ++RDI
Sbjct: 1008 QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDI 1044
Score = 92 (37.4 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
SLL + E R VLR LGY EA +++ GRVAC +S E ++LT
Sbjct: 855 SLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHE--LLLT 899
>UNIPROTKB|B4DM01 [details] [associations]
symbol:SKIV2L "cDNA FLJ57529, highly similar to Helicase
SKI2W (EC 3.6.1.-)" species:9606 "Homo sapiens" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 eggNOG:COG4581
InterPro:IPR025696 Pfam:PF13234 UniGene:Hs.89864 HGNC:HGNC:10898
HOVERGEN:HBG060025 OrthoDB:EOG47H5P5 ChiTaRS:SKIV2L EMBL:AK297230
IPI:IPI01014021 SMR:B4DM01 STRING:B4DM01 Ensembl:ENST00000551164
Uniprot:B4DM01
Length = 1088
Score = 142 (55.0 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 28/97 (28%), Positives = 53/97 (54%)
Query: 55 LARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRCM 114
+A+ I + + L+ + +V + L++VV+ W G F ++ ++ EG ++RC+
Sbjct: 983 VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI 1042
Query: 115 RRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+RL E+ R L A+R +G +L K A ++RDI
Sbjct: 1043 QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDI 1079
Score = 92 (37.4 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
SLL + E R VLR LGY EA +++ GRVAC +S E ++LT
Sbjct: 890 SLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHE--LLLT 934
>UNIPROTKB|F8VNU1 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI01022196
SMR:F8VNU1 Ensembl:ENST00000546742 Ensembl:ENST00000547054
Ensembl:ENST00000550012 Ensembl:ENST00000550640 UCSC:uc011ghk.1
Uniprot:F8VNU1
Length = 1088
Score = 142 (55.0 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 28/97 (28%), Positives = 53/97 (54%)
Query: 55 LARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRCM 114
+A+ I + + L+ + +V + L++VV+ W G F ++ ++ EG ++RC+
Sbjct: 983 VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI 1042
Query: 115 RRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+RL E+ R L A+R +G +L K A ++RDI
Sbjct: 1043 QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDI 1079
Score = 92 (37.4 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
SLL + E R VLR LGY EA +++ GRVAC +S E ++LT
Sbjct: 890 SLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHE--LLLT 934
>UNIPROTKB|F1LP39 [details] [associations]
symbol:Skiv2l "Protein Skiv2l" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 RGD:1303059 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
OMA:TRLDETC GeneTree:ENSGT00690000102154 IPI:IPI00417365
Ensembl:ENSRNOT00000000481 Uniprot:F1LP39
Length = 1206
Score = 142 (55.0 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 28/97 (28%), Positives = 53/97 (54%)
Query: 55 LARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRCM 114
+A+ I + + L+ + +V + L++VV+ W G F ++ ++ EG ++RC+
Sbjct: 1101 VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI 1160
Query: 115 RRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+RL E+ R L A+R +G +L K A ++RDI
Sbjct: 1161 QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDI 1197
Score = 92 (37.4 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
SLL + E R VLR LGY EA +++ GRVAC +S E ++LT
Sbjct: 1008 SLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHE--LLLT 1052
>RGD|1303059 [details] [associations]
symbol:Skiv2l "superkiller viralicidic activity 2-like (S.
cerevisiae )" species:10116 "Rattus norvegicus" [GO:0055087 "Ski
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
RGD:1303059 GO:GO:0005524 GO:GO:0003676 EMBL:BX883045
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 HOGENOM:HOG000163048
KO:K12599 CTD:6499 HOVERGEN:HBG060025 OrthoDB:EOG47H5P5
IPI:IPI00417365 RefSeq:NP_998724.1 UniGene:Rn.138027
ProteinModelPortal:Q6MG76 IntAct:Q6MG76 PhosphoSite:Q6MG76
PRIDE:Q6MG76 GeneID:294260 KEGG:rno:294260 UCSC:RGD:1303059
InParanoid:Q6MG76 NextBio:637849 ArrayExpress:Q6MG76
Genevestigator:Q6MG76 Uniprot:Q6MG76
Length = 1241
Score = 142 (55.0 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 28/97 (28%), Positives = 53/97 (54%)
Query: 55 LARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRCM 114
+A+ I + + L+ + +V + L++VV+ W G F ++ ++ EG ++RC+
Sbjct: 1136 VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI 1195
Query: 115 RRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+RL E+ R L A+R +G +L K A ++RDI
Sbjct: 1196 QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDI 1232
Score = 92 (37.4 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
SLL + E R VLR LGY EA +++ GRVAC +S E ++LT
Sbjct: 1043 SLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHE--LLLT 1087
>UNIPROTKB|Q15477 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=TAS] Reactome:REACT_17015 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 EMBL:AF019413 EMBL:AL662849 EMBL:AL645922
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC EMBL:U09877 EMBL:X98378
EMBL:Z48796 IPI:IPI00414819 PIR:S56752 RefSeq:NP_008860.4
UniGene:Hs.89864 ProteinModelPortal:Q15477 SMR:Q15477 IntAct:Q15477
STRING:Q15477 PhosphoSite:Q15477 DMDM:3123284 PaxDb:Q15477
PRIDE:Q15477 DNASU:6499 Ensembl:ENST00000375394
Ensembl:ENST00000383336 Ensembl:ENST00000412823
Ensembl:ENST00000421789 Ensembl:ENST00000429465
Ensembl:ENST00000448219 GeneID:6499 KEGG:hsa:6499 UCSC:uc003nyn.1
CTD:6499 GeneCards:GC06P031926 H-InvDB:HIX0005742
H-InvDB:HIX0166115 H-InvDB:HIX0166390 H-InvDB:HIX0166908
H-InvDB:HIX0167165 H-InvDB:HIX0167404 HGNC:HGNC:10898 MIM:600478
MIM:614602 neXtProt:NX_Q15477 Orphanet:84064 PharmGKB:PA35798
HOVERGEN:HBG060025 InParanoid:Q15477 OrthoDB:EOG47H5P5
PhylomeDB:Q15477 ChiTaRS:SKIV2L GenomeRNAi:6499 NextBio:25263
ArrayExpress:Q15477 Bgee:Q15477 CleanEx:HS_SKIV2L
Genevestigator:Q15477 Uniprot:Q15477
Length = 1246
Score = 142 (55.0 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 28/97 (28%), Positives = 53/97 (54%)
Query: 55 LARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRCM 114
+A+ I + + L+ + +V + L++VV+ W G F ++ ++ EG ++RC+
Sbjct: 1141 VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI 1200
Query: 115 RRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+RL E+ R L A+R +G +L K A ++RDI
Sbjct: 1201 QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDI 1237
Score = 92 (37.4 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
SLL + E R VLR LGY EA +++ GRVAC +S E ++LT
Sbjct: 1048 SLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHE--LLLT 1092
>UNIPROTKB|F1RQW4 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:CT956038 Ensembl:ENSSSCT00000001566 ArrayExpress:F1RQW4
Uniprot:F1RQW4
Length = 1246
Score = 142 (55.0 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 28/97 (28%), Positives = 53/97 (54%)
Query: 55 LARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRCM 114
+A+ I + + L+ + +V + L++VV+ W G F ++ ++ EG ++RC+
Sbjct: 1141 VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI 1200
Query: 115 RRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+RL E+ R L A+R +G +L K A ++RDI
Sbjct: 1201 QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDI 1237
Score = 92 (37.4 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
SLL + E R VLR LGY EA +++ GRVAC +S E ++LT
Sbjct: 1048 SLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHE--LLLT 1092
>UNIPROTKB|E1BMS0 [details] [associations]
symbol:LOC100139548 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:DAAA02055371 IPI:IPI00690289 RefSeq:XP_003583920.1
RefSeq:XP_003587743.1 Ensembl:ENSBTAT00000007339 GeneID:100139548
KEGG:bta:100139548 Uniprot:E1BMS0
Length = 1246
Score = 138 (53.6 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 55 LARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRCM 114
+A+ I + L+ + +V + L++VV+ W G F ++ ++ EG ++RC+
Sbjct: 1141 VAKRIGEVQAACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI 1200
Query: 115 RRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+RL E+ R L A+R +G +L K A ++RDI
Sbjct: 1201 QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDI 1237
Score = 92 (37.4 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
SLL + E R VLR LGY EA +++ GRVAC +S E ++LT
Sbjct: 1048 SLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHE--LLLT 1092
>FB|FBgn0039117 [details] [associations]
symbol:tst "twister" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 EMBL:AJ276896
ProteinModelPortal:Q9BI21 SMR:Q9BI21 STRING:Q9BI21 PaxDb:Q9BI21
PRIDE:Q9BI21 FlyBase:FBgn0039117 InParanoid:Q9BI21
OrthoDB:EOG46HDRK ArrayExpress:Q9BI21 Bgee:Q9BI21 Uniprot:Q9BI21
Length = 1197
Score = 142 (55.0 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 77 NQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLL 136
N+ L++VV+ W F ++ +T + EG I+RC+++L E +R + A+ IGN L
Sbjct: 1113 NRLNFGLLEVVYEWARNKPFAEIMKLTTVQEGIIVRCIQQLNETVRDVKTAAIRIGNPGL 1172
Query: 137 EEKFNEAIKTVKRDI 151
+ K EA +KRDI
Sbjct: 1173 QSKMEEASAAIKRDI 1187
Score = 87 (35.7 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 11 CRK-RVLRRLGYATEADVIEMKGRVACELSKSE----ETVILTINDKLELARHIARIS 63
C K +VLR L Y E D + +KG+VACE+ ++E E ++ + + LE A A +S
Sbjct: 1009 CNKLKVLRALKYIDELDEVTLKGKVACEMGQNELLITELILCNMFNDLEPAEIAALLS 1066
>GENEDB_PFALCIPARUM|PFF0100w [details] [associations]
symbol:PFF0100w "putative ATP dependent RNA
helicase" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL844505 HOGENOM:HOG000163047 KO:K12598
InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_966011.1
ProteinModelPortal:C6KSM1 EnsemblProtists:PFF0100w:mRNA
GeneID:3885738 KEGG:pfa:PFF0100w EuPathDB:PlasmoDB:PF3D7_0602100
OMA:RGIVIIM ProtClustDB:CLSZ2433467 Uniprot:C6KSM1
Length = 1350
Score = 175 (66.7 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 35/115 (30%), Positives = 68/115 (59%)
Query: 37 ELSKSEETVILTINDKLELARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASF 96
E++ ++ ++ ++ A H+A E ++++ Y+++FK ++M + W G SF
Sbjct: 1228 EITINDPILVEGYQQIIKTANHVATKMNECGMNINLKDYIDKFKSAIMPIALLWARGHSF 1287
Query: 97 LKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
+++ S + I+EGSIIR +RRL+E++RQ++ A R I N + E A ++R I
Sbjct: 1288 VEILSDSQIYEGSIIRTLRRLDELIRQMICAFRGINNDSMCETLTLATNKLRRGI 1342
Score = 40 (19.1 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 27 VIEMKGRVACELSKSEETVI 46
V+ MKG++A + +E VI
Sbjct: 1176 VVTMKGQIASAILSVDELVI 1195
>DICTYBASE|DDB_G0277211 [details] [associations]
symbol:DDB_G0277211 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0277211 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000019 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC RefSeq:XP_642686.1
ProteinModelPortal:Q86K90 EnsemblProtists:DDB0233454 GeneID:8620875
KEGG:ddi:DDB_G0277211 InParanoid:Q86K90 Uniprot:Q86K90
Length = 1378
Score = 175 (66.7 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 41/132 (31%), Positives = 76/132 (57%)
Query: 29 EMKGRVACELSKSEETVILTINDKLELAR-HIARIS-----IESKLDLD---EDSYVNQF 79
E+ ++C + + ++ V ++ +LE A+ ++ + + +ES LD +D
Sbjct: 1238 EVVSVLSCLIFQEKDAVQPSLTPRLEEAKQNLIKTAEKTYKVESDKGLDVVPDDKLETTL 1297
Query: 80 KPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRCMRRLEEVLRQLVQASRNIGNTLLEEK 139
K LM VV+ W G F +C++T++ EGSI+R + R+ E +++ A+R IG+T L +K
Sbjct: 1298 KFGLMQVVYEWARGTPFNDICTLTNVLEGSIVRAITRIGETCQEVRNAARVIGDTKLLQK 1357
Query: 140 FNEAIKTVKRDI 151
EA++ +KRDI
Sbjct: 1358 MEEAMRLIKRDI 1369
>UNIPROTKB|F1MJX4 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:DAAA02050346 EMBL:DAAA02050343 EMBL:DAAA02050344
EMBL:DAAA02050345 IPI:IPI00839454 Ensembl:ENSBTAT00000047363
Uniprot:F1MJX4
Length = 937
Score = 167 (63.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 33/49 (67%), Positives = 43/49 (87%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSK--SEETVILT 48
++L M+ELKCRKRVLRRLG+AT +DVIEMKGRVACE+S+ S + ++LT
Sbjct: 842 TVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISRWYSADELLLT 890
>SGD|S000004390 [details] [associations]
symbol:SKI2 "Ski complex component and putative RNA helicase"
species:4932 "Saccharomyces cerevisiae" [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0070478
"nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic
nonsense-mediated decay" evidence=IGI;IMP] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA;IPI] [GO:0034427 "nuclear-transcribed mRNA
catabolic process, exonucleolytic, 3'-5'" evidence=IMP] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 SGD:S000004390 GO:GO:0005524
GO:GO:0006417 GO:GO:0003677 EMBL:BK006945 GO:GO:0051607
GO:GO:0003723 EMBL:U19729 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:Z18944 EMBL:L13469 GO:GO:0008026 GO:GO:0003724
GO:GO:0070478 GO:GO:0070481 eggNOG:COG4581 KO:K05544
RefSeq:NP_013505.4 GeneID:851117 KEGG:sce:YLR401C
InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087 HOGENOM:HOG000163048
KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R PIR:S55954
RefSeq:NP_013502.3 PDB:4A4K PDB:4A4Z PDBsum:4A4K PDBsum:4A4Z
ProteinModelPortal:P35207 SMR:P35207 DIP:DIP-5887N IntAct:P35207
MINT:MINT-662639 STRING:P35207 PaxDb:P35207 PeptideAtlas:P35207
EnsemblFungi:YLR398C GeneID:851114 KEGG:sce:YLR398C CYGD:YLR398c
GeneTree:ENSGT00690000102154 NextBio:967830 Genevestigator:P35207
GermOnline:YLR398C Uniprot:P35207
Length = 1287
Score = 139 (54.0 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 28/84 (33%), Positives = 53/84 (63%)
Query: 68 LDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRCMRRLEEVLRQLVQA 127
L DE ++++ + ++M+VV+ W G SF ++ ++ EG+++R + L+E+ R++ A
Sbjct: 1196 LTQDEAEFLDRKRFAMMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITWLDEICREVKTA 1255
Query: 128 SRNIGNTLLEEKFNEAIKTVKRDI 151
S IGN+ L K + A + +KRDI
Sbjct: 1256 SIIIGNSTLHMKMSRAQELIKRDI 1279
Score = 56 (24.8 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 1 MSLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVI 46
+SLL + + R VL+ + + + +KGRVACE++ E V+
Sbjct: 1086 LSLL--PDYEKRLAVLKDTEFIDQNHNVLLKGRVACEINSGYELVL 1129
>WB|WBGene00008502 [details] [associations]
symbol:skih-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 EMBL:Z68341
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC
GeneTree:ENSGT00690000102154 PIR:T20487 RefSeq:NP_502084.2
ProteinModelPortal:Q19103 SMR:Q19103 STRING:Q19103 PaxDb:Q19103
EnsemblMetazoa:F01G4.3 GeneID:178017 KEGG:cel:CELE_F01G4.3
UCSC:F01G4.3 CTD:178017 WormBase:F01G4.3 InParanoid:Q19103
NextBio:899374 Uniprot:Q19103
Length = 1266
Score = 158 (60.7 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 41/156 (26%), Positives = 79/156 (50%)
Query: 4 LHMEELKCRKRVLR-RLGYATEADVIEMKGRVACELSKSEE------TVILTINDKLELA 56
+H +EL + +L + + A++ + + C+ + E TV I++ ++
Sbjct: 1103 IHHQELLITELILDYKFHQRSPAELAALLSTLTCQYNSGREMQFGGDTVFGEISESVKSV 1162
Query: 57 RHIARI-SIESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRCMR 115
+ R+ S+ SK + + LM+VV+ W G F ++ +TD EG I++C++
Sbjct: 1163 --LTRLESVASKHKSQISDLGCEIRFDLMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQ 1220
Query: 116 RLEEVLRQLVQASRNIGNTLLEEKFNEAIKTVKRDI 151
RL+EV + + A R +G+ L EK E +++RDI
Sbjct: 1221 RLDEVCKDVRNAGRIVGDPALVEKMEEVSASIRRDI 1256
>POMBASE|SPCC550.03c [details] [associations]
symbol:SPCC550.03c "Ski complex RNA helicase Ski2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006402 "mRNA catabolic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0055087 "Ski complex" evidence=ISO]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
[GO:2000765 "regulation of cytoplasmic translation" evidence=ISO]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC550.03c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:2000765
EMBL:CU329672 GO:GO:0071276 GO:GO:0071585 GO:GO:0003723
GO:GO:0006402 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0003724 eggNOG:COG4581 GO:GO:0055087 PIR:T41378
RefSeq:NP_588095.1 ProteinModelPortal:O59801 STRING:O59801
EnsemblFungi:SPCC550.03c.1 GeneID:2538841 KEGG:spo:SPCC550.03c
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
NextBio:20800023 Uniprot:O59801
Length = 1213
Score = 157 (60.3 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 38/147 (25%), Positives = 79/147 (53%)
Query: 6 MEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILTINDKL-ELARHIARISI 64
+ + C + + + + + E++ ++ L K +E +IL++ +K+ ++ H +
Sbjct: 1066 LADFSCEETIALLSAFVFD-EKTEVEPTISPHLQKGKE-MILSVAEKVNQIQEHYQVLYF 1123
Query: 65 ESKLDLDEDSYVNQFKPSLMDVVHAWCEGASFLKVCSITDIFEGSIIRCMRRLEEVLRQL 124
D + +Q + LM+V + W G SF ++ +TD+ EGSI+R + RL+EVLR+
Sbjct: 1124 NEGNDFE-----SQPRFGLMEVCYEWARGMSFNRITDLTDVLEGSIVRTIIRLDEVLREC 1178
Query: 125 VQASRNIGNTLLEEKFNEAIKTVKRDI 151
A+R +G++ + K E ++R+I
Sbjct: 1179 RGAARVVGDSSMYTKMEECQNLIRRNI 1205
>UNIPROTKB|H7C4L3 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] InterPro:IPR012961 Pfam:PF08148
GO:GO:0005524 EMBL:AL645922 GO:GO:0016818 HGNC:HGNC:10898
ChiTaRS:SKIV2L ProteinModelPortal:H7C4L3 PRIDE:H7C4L3
Ensembl:ENST00000491994 Uniprot:H7C4L3
Length = 182
Score = 92 (37.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 2 SLLHMEELKCRKRVLRRLGYATEADVIEMKGRVACELSKSEETVILT 48
SLL + E R VLR LGY EA +++ GRVAC +S E ++LT
Sbjct: 47 SLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHE--LLLT 91
Score = 53 (23.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 9/39 (23%), Positives = 20/39 (51%)
Query: 55 LARHIARISIESKLDLDEDSYVNQFKPSLMDVVHAWCEG 93
+A+ I + + L+ + +V + L++VV+ W G
Sbjct: 140 VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARG 178
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 159 159 0.00091 106 3 11 22 0.46 31
30 0.43 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 45
No. of states in DFA: 562 (60 KB)
Total size of DFA: 128 KB (2082 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.86u 0.10s 17.96t Elapsed: 00:00:00
Total cpu time: 17.86u 0.10s 17.96t Elapsed: 00:00:00
Start: Thu Aug 15 13:29:35 2013 End: Thu Aug 15 13:29:35 2013