BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6288
(166 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q08623|HDHD1_HUMAN Pseudouridine-5'-monophosphatase OS=Homo sapiens GN=HDHD1 PE=1 SV=3
Length = 228
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAP 88
GA +LI HL KH IPFA+ATSS SF++KTSRHK+ LF H+VLG DPEV+ GKP P
Sbjct: 94 GAEKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLFSHIVLGD-DPEVQHGKPDP 152
Query: 89 DVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLN 148
D+FL AKRF P KCLVFEDAPNGV A AAGM VMVPD + + T A LVLN
Sbjct: 153 DIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLN 212
Query: 149 SLEEFKPELYGLPPFE 164
SL++F+PEL+GLP +E
Sbjct: 213 SLQDFQPELFGLPSYE 228
>sp|Q94529|GS1_DROME Probable pseudouridine-5'-monophosphatase OS=Drosophila
melanogaster GN=Gs1l PE=2 SV=2
Length = 231
Score = 165 bits (417), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 101/146 (69%)
Query: 20 LLLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADP 79
L+ L GA RL+ HLH + +PF +ATSS + ELKT++H++ LF+H V GS+D
Sbjct: 86 LMRNAQLMPGAERLLRHLHANKVPFCLATSSGADMVELKTAQHRELFSLFNHKVCGSSDK 145
Query: 80 EVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHR 139
EV GKPAPD+FLVAA RF P+PS CLVFED+PNGV A +AGM VMVPDP + + +
Sbjct: 146 EVVNGKPAPDIFLVAAGRFGVPPKPSDCLVFEDSPNGVTAANSAGMQVVMVPDPRLSQEK 205
Query: 140 TEAADLVLNSLEEFKPELYGLPPFED 165
T A VL SL +FKPE +GLP F D
Sbjct: 206 TSHATQVLASLADFKPEQFGLPAFTD 231
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 4 SQVLNYVTHVIFDMDGLLLGY-NLAIGALRLINHLHKHNIPFAI 46
++VL VTH +FDMDGLLL L A +I + PF I
Sbjct: 3 NKVLRKVTHCVFDMDGLLLDTERLYTVATEMILEPYGKTYPFEI 46
>sp|Q9D5U5|HDHD1_MOUSE Pseudouridine-5'-monophosphatase OS=Mus musculus GN=Hdhd1 PE=2 SV=1
Length = 234
Score = 152 bits (384), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 91/137 (66%), Gaps = 1/137 (0%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAP 88
GA LI+HL KH +PFA+ATSS +F+ KTSRH LFHH+VLG DPEVK GKP
Sbjct: 99 GAEELIHHLKKHRLPFALATSSETVTFQTKTSRHTGFFGLFHHIVLGD-DPEVKNGKPGM 157
Query: 89 DVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLN 148
D+FL AKRF P P CLVFED+PNGV A GM VMVP + T A LVL+
Sbjct: 158 DIFLTCAKRFSPPPDPKDCLVFEDSPNGVEAAIHCGMQVVMVPHENLSADLTRKATLVLS 217
Query: 149 SLEEFKPELYGLPPFED 165
SL +FKPEL+GLP F +
Sbjct: 218 SLHDFKPELFGLPAFTE 234
>sp|O59760|YJM7_SCHPO Putative uncharacterized hydrolase C1020.07 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC1020.07 PE=3 SV=1
Length = 236
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPE--VKQGKP 86
G + L++ L NIP A+ATSS +FE K++ F ++ DP V +GKP
Sbjct: 90 GVMNLLSKLKSLNIPIALATSSDTHNFEKKSAHLSHLFDHFDGNIITGDDPRLPVGRGKP 149
Query: 87 APDVFLVAAKRFDEKPQ--------PSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTV 135
PD++ +A K ++K + P CLVFED+ GV +AAGM V VPD +
Sbjct: 150 HPDIWFIALKMINDKRKAQGQAEILPENCLVFEDSITGVQSGRAAGMKVVWVPDVNI 206
>sp|O14165|YDX1_SCHPO Uncharacterized protein C4C5.01 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC4C5.01 PE=3 SV=2
Length = 249
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVK--QGKP 86
GA LIN+L H I +ATSS ++ +KT+ K + F V+ +P + +GKP
Sbjct: 95 GAESLINNLSNHGIDIGLATSSNTANYNMKTAHLKHIFEKFGKNVITGDNPSIAPGRGKP 154
Query: 87 APDVFLVAAKRFDEKPQ--------PSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH 138
PD++L +E + PS+C+ FED+ GV AKAAGM + VPD +
Sbjct: 155 FPDIWLKVLNLINESRKQRGLKALTPSQCIAFEDSIPGVKSAKAAGMHVIWVPDAAIKNL 214
Query: 139 RTEAADLVLNSLEEFKPEL 157
+ + +++S E P L
Sbjct: 215 VGDQLNEIVDSQCETLPSL 233
>sp|Q86ZR7|YKD3A_YEAST Putative uncharacterized hydrolase YKL033W-A OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YKL033W-A
PE=1 SV=2
Length = 236
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 42 IPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVK--QGKPAPDVFLVAAKRFD 99
IP A+ TSS K F KTS ++ LF +V G DP + +GKP PD++ + K +
Sbjct: 107 IPIALCTSSNKTKFRGKTSHLEEGFDLFDTIVTGD-DPRIAKGRGKPFPDIWQLGLKELN 165
Query: 100 EK----PQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADL------VLNS 149
EK +P +C+VFED GV AKA G + VP P + L +L+S
Sbjct: 166 EKFHTDIKPDECIVFEDGIPGVKSAKAFGAHVIWVPHPEAHAVLGDTEALLAGKGELLSS 225
Query: 150 LEEFKPELYGL 160
LE+ + YGL
Sbjct: 226 LEKLEMSKYGL 236
>sp|P77625|YFBT_ECOLI Sugar phosphatase YfbT OS=Escherichia coli (strain K12) GN=yfbT
PE=1 SV=2
Length = 216
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 69/132 (52%), Gaps = 22/132 (16%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEV------- 81
GA+ L++HL+K IP+AI TS S + +RHK + G PEV
Sbjct: 87 GAIALLSHLNKAGIPWAIVTSG---SMPVARARHK---------IAGLPAPEVFVTAERV 134
Query: 82 KQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTE 141
K+GKP PD +L+ A+ PQ +C+V EDAP GVL AAG + V P R
Sbjct: 135 KRGKPEPDAYLLGAQLLGLAPQ--ECVVVEDAPAGVLSGLAAGCHVIAVNAPA-DTPRLN 191
Query: 142 AADLVLNSLEEF 153
DLVL+SLE+
Sbjct: 192 EVDLVLHSLEQI 203
>sp|P54607|YHCW_BACSU Uncharacterized protein YhcW OS=Bacillus subtilis (strain 168)
GN=yhcW PE=3 SV=1
Length = 220
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 59 TSRHKDTLKLFHHV-VLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGV 117
S H + LF V+ +AD +V++ KP P+++L+AAK P++CL FED+ NG
Sbjct: 115 VSGHLKQIGLFDDFEVIQTAD-DVEEVKPNPELYLLAAKNLG--VSPAECLAFEDSVNGS 171
Query: 118 LGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFK 154
+ AK AGM CV+VP+ E D L S+ E +
Sbjct: 172 IAAKRAGMKCVIVPNKVTGTLMFEDYDHRLESMAEME 208
>sp|P77475|YQAB_ECOLI Fructose-1-phosphate phosphatase YqaB OS=Escherichia coli (strain
K12) GN=yqaB PE=1 SV=1
Length = 188
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 43 PFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102
P A+ T S E + L L H+ A VK KPAPD FL+ A+R
Sbjct: 104 PMAVGTGSESAIAEALLAH----LGLRHYFDAVVAADHVKHHKPAPDTFLLCAQRM--GV 157
Query: 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMV 130
QP++C+VFEDA G+ A+AAGM V V
Sbjct: 158 QPTQCVVFEDADFGIQAARAAGMDAVDV 185
>sp|O33513|CBBY_RHOCA Protein CbbY OS=Rhodobacter capsulatus GN=cbbY PE=3 SV=1
Length = 227
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 7/124 (5%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFE--LKTSRHKDTLKLFHHVVLGSADPEVKQGKP 86
G LI+ + AIAT++ + + + + + K +F + G EV Q KP
Sbjct: 97 GVAELIDRAKASGLRLAIATTTTRANVDALIAATFSKPAGDIFEVIAAGD---EVAQKKP 153
Query: 87 APDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLV 146
APDV+L A + P+ CL FED+ G+ A+AAG+ V+ P AAD
Sbjct: 154 APDVYLRALQGL--GLPPAACLAFEDSRAGLASARAAGLRVVLTPSEYTRGDDFSAADWR 211
Query: 147 LNSL 150
+ L
Sbjct: 212 IPDL 215
>sp|P40119|CBBYC_CUPNH Protein CbbY, chromosomal OS=Cupriavidus necator (strain ATCC 17699
/ H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3
Length = 254
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFE--LKTSRHKDTLKLFHHVVLGSADPE 80
G L G RLI+ + +P AIAT++ + + L+ D + F +G A
Sbjct: 94 GLPLRPGIARLIDEAGEAGLPLAIATTTTPANLDALLQAPLGADWRRRF--AAIGDAGTT 151
Query: 81 VKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRT 140
+ KPAPDV+L +R + CL ED+ NG+ A+AAG+ V+ P +
Sbjct: 152 AIK-KPAPDVYLAVLERLGL--EGGDCLAIEDSANGLRAARAAGIPTVVTPTAFSAQDSF 208
Query: 141 EAADLVL 147
E A LVL
Sbjct: 209 EGALLVL 215
>sp|O06995|PGMB_BACSU Beta-phosphoglucomutase OS=Bacillus subtilis (strain 168) GN=yvdM
PE=1 SV=1
Length = 226
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 18/132 (13%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPE-VKQGKPA 87
G RL+ L NI +A+SS K R + FH +V DP + +GKP
Sbjct: 95 GIGRLLCQLKNENIKIGLASSSRNAP---KILRRLAIIDDFHAIV----DPTTLAKGKPD 147
Query: 88 PDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMV--PDPTVPKHRTEAADL 145
PD+FL AA D P+ C EDA G+ K+AGM V V P + ADL
Sbjct: 148 PDIFLTAAAMLD--VSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML------GADL 199
Query: 146 VLNSLEEFKPEL 157
V+ + EL
Sbjct: 200 VVRQTSDLTLEL 211
>sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga
maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM
10099) GN=TM_1254 PE=1 SV=1
Length = 216
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAP 88
G + + I A+ATS+ + L+ R D K F +V G +VK GKP P
Sbjct: 88 GVREALEFVKSKRIKLALATSTPQRE-ALERLRRLDLEKYFDVMVFGD---QVKNGKPDP 143
Query: 89 DVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCV 128
+++L+ +R + P K +VFED+ +GV AK+AG+ +
Sbjct: 144 EIYLLVLERLN--VVPEKVVVFEDSKSGVEAAKSAGIERI 181
>sp|Q04541|CBBYP_CUPNH Protein CbbY, plasmid OS=Cupriavidus necator (strain ATCC 17699 /
H16 / DSM 428 / Stanier 337) GN=cbbYP PE=3 SV=1
Length = 254
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRH--KDTLKLFHHVVLGSADPE 80
G L G RLI + +P AIAT++ + + H D F + +
Sbjct: 94 GLPLRPGIARLIAEAGEAGLPLAIATTTTPANLDALLQAHLGADWRGRFA-AICDAGTTA 152
Query: 81 VKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRT 140
+K KPAPDV+L +R + CL ED+ NG+ A+AAG+ V+ P +
Sbjct: 153 IK--KPAPDVYLAVLERLGL--EAGDCLAIEDSGNGLRAARAAGIPTVVTPTTFSAQDSF 208
Query: 141 EAADLVLNSL 150
E A LVL L
Sbjct: 209 EGALLVLPHL 218
>sp|P95649|CBBY_RHOSH Protein CbbY OS=Rhodobacter sphaeroides GN=cbbY PE=3 SV=1
Length = 230
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFE--LKTSRHKDTLKLFHHVVLGSADPEVKQGKP 86
G LI + I A+AT+++ + E + ++F + G V + KP
Sbjct: 96 GIADLIAEAKRAGIRLAVATTTSLPNVEALCRACFGHPAREIFDVIAAGDM---VAEKKP 152
Query: 87 APDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLV 146
+PD++ +A + D P+ + + ED+ NG+ AK AG+ C++ P AD +
Sbjct: 153 SPDIYRLALRELDVPPE--RAVALEDSLNGLRAAKGAGLRCIVSPGFYTRHEEFAGADRL 210
Query: 147 LNSLEEF 153
L+S E
Sbjct: 211 LDSFAEL 217
>sp|P35924|YFGS_LACCA Uncharacterized protein in fgs 3'region OS=Lactobacillus casei PE=3
SV=1
Length = 215
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAP 88
GA + + L + A+ATSSAK ++ + +K F ++ GS +V KP P
Sbjct: 89 GADKTLQTLDQMGYRLALATSSAKHYVDVVLAA-TGWVKRFDPILTGS---DVTAHKPDP 144
Query: 89 DVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVP 131
+++ V + E P +V ED GV A+ AG+ VM+P
Sbjct: 145 EIYHVMKTKLPETP----AIVVEDTHVGVAAAEGAGLPVVMIP 183
>sp|P44004|Y488_HAEIN Uncharacterized protein HI_0488 OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0488 PE=3 SV=1
Length = 200
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 76 SADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGM 125
SAD +VK+ KP P+ FL A+ + PS+C+VFEDA GV +AGM
Sbjct: 140 SAD-DVKEHKPHPETFLRCAELI--QANPSRCIVFEDADLGVQAGLSAGM 186
>sp|P77247|YNIC_ECOLI 2-deoxyglucose-6-phosphate phosphatase OS=Escherichia coli (strain
K12) GN=yniC PE=1 SV=1
Length = 222
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 84 GKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH-RTEA 142
KP P V+L A + P C+ ED+ NG++ +KAA M ++VP P R
Sbjct: 147 SKPHPQVYLDCAAKLGVDPL--TCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVL 204
Query: 143 ADLVLNSLEEF 153
AD+ L+SL E
Sbjct: 205 ADVKLSSLTEL 215
>sp|P71447|PGMB_LACLA Beta-phosphoglucomutase OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=pgmB PE=1 SV=2
Length = 221
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADP-EVKQGKPA 87
G L+L+ L + I A+A++S F L K L + + ADP EV KPA
Sbjct: 95 GILQLLKDLRSNKIKIALASASKNGPFLL----EKMNLTGYFDAI---ADPAEVAASKPA 147
Query: 88 PDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDP 133
PD+F+ AA PS+ + ED+ G+ K +G + V P
Sbjct: 148 PDIFIAAAHAV--GVAPSESIGLEDSQAGIQAIKDSGALPIGVGRP 191
>sp|P65070|Y3433_MYCBO Uncharacterized protein Mb3433 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb3433 PE=4 SV=1
Length = 262
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 11/131 (8%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLG-SADPEVKQGKPA 87
G+ R + + + A+ +SSA L T+ + V G + E GKPA
Sbjct: 136 GSRRYLEAVTAAGLGVAVVSSSANTRDVLATTGLD---RFVQQRVDGVTLREEHIAGKPA 192
Query: 88 PDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPT-----VPKHRTEA 142
PD FL AA+ P VFEDA +GV +A + V+ + T + R
Sbjct: 193 PDSFLRAAELL--GVTPDAAAVFEDALSGVAAGRAGNFAVVVGINRTGRAAQAAQLRRHG 250
Query: 143 ADLVLNSLEEF 153
AD+V+ L E
Sbjct: 251 ADVVVTDLAEL 261
>sp|P65069|Y3400_MYCTU Uncharacterized protein Rv3400/MT3508 OS=Mycobacterium tuberculosis
GN=Rv3400 PE=4 SV=1
Length = 262
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 11/131 (8%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLG-SADPEVKQGKPA 87
G+ R + + + A+ +SSA L T+ + V G + E GKPA
Sbjct: 136 GSRRYLEAVTAAGLGVAVVSSSANTRDVLATTGLD---RFVQQRVDGVTLREEHIAGKPA 192
Query: 88 PDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPT-----VPKHRTEA 142
PD FL AA+ P VFEDA +GV +A + V+ + T + R
Sbjct: 193 PDSFLRAAELL--GVTPDAAAVFEDALSGVAAGRAGNFAVVVGINRTGRAAQAAQLRRHG 250
Query: 143 ADLVLNSLEEF 153
AD+V+ L E
Sbjct: 251 ADVVVTDLAEL 261
>sp|Q7ADF8|YNIC_ECO57 2-deoxyglucose-6-phosphate phosphatase OS=Escherichia coli O157:H7
GN=yniC PE=3 SV=1
Length = 222
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 84 GKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH-RTEA 142
KP P V+L A + P C+ ED+ NG++ +KAA M ++VP P R
Sbjct: 147 SKPHPQVYLDCAAKLGVDPL--TCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVL 204
Query: 143 ADLVLNSLEEF 153
A++ L+SL E
Sbjct: 205 ANVKLSSLTEL 215
>sp|Q8FCW0|GPH_ECOL6 Phosphoglycolate phosphatase OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=c4155 PE=3 SV=1
Length = 252
Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 69 FHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCV 128
+ VV+G D V+ KP PD L+ A+R PQ + L D+ N + AKAAG V
Sbjct: 153 YFSVVIGGDD--VQNKKPHPDPLLLVAERMGIAPQ--QMLFVGDSRNDIQAAKAAGCPSV 208
Query: 129 MVPDPTVPKHRTEAADL-----VLNSLEEFKPELYGLPPFEDK 166
+ T + EA DL + SL + P L GLP E++
Sbjct: 209 GL---TYGYNYGEAIDLSQPDVIYQSLNDLLPAL-GLPHSENQ 247
>sp|Q32AJ7|GPH_SHIDS Phosphoglycolate phosphatase OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=SDY_3694 PE=3 SV=1
Length = 252
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 69 FHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCV 128
+ VV+G D V+ KP PD L+ A+R PQ + L D+ N + AKAAG V
Sbjct: 153 YFSVVIGGDD--VQNKKPHPDPLLLVAERMGIAPQ--QMLFVGDSRNDIQAAKAAGCPSV 208
Query: 129 MVPDPTVPKHRTEAADL-----VLNSLEEFKPELYGLPPFEDK 166
+ T + EA DL + S+ + P L GLP E++
Sbjct: 209 GL---TYGYNYGEAIDLSQPDVIYQSINDLLPAL-GLPHSENQ 247
>sp|Q3YWN8|GPH_SHISS Phosphoglycolate phosphatase OS=Shigella sonnei (strain Ss046)
GN=SSON_3516 PE=3 SV=1
Length = 252
Score = 37.7 bits (86), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 69 FHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCV 128
+ VV+G D V+ KP PD L+ A+R PQ + L D+ N + AKAAG V
Sbjct: 153 YFSVVIGGDD--VQNKKPHPDPLLLVAERMGIAPQ--QMLFVGDSRNDIQAAKAAGCPSV 208
Query: 129 MVPDPTVPKHRTEAADL-----VLNSLEEFKPELYGLPPFEDK 166
+ T + EA DL + S+ + P L GLP E++
Sbjct: 209 GL---TYGYNYGEAIDLSQPDVIYQSINDLLPAL-GLPHSENQ 247
>sp|Q31VP9|GPH_SHIBS Phosphoglycolate phosphatase OS=Shigella boydii serotype 4 (strain
Sb227) GN=SBO_3372 PE=3 SV=1
Length = 252
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 69 FHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCV 128
+ VV+G D V+ KP PD L+ A+R PQ + L D+ N + AKAAG V
Sbjct: 153 YFSVVIGGDD--VQNKKPHPDPLLLVAERMGIAPQ--QMLFVGDSRNDIQAAKAAGCPSV 208
Query: 129 MVPDPTVPKHRTEAADL-----VLNSLEEFKPELYGLPPFEDK 166
+ T + EA DL + S+ + P L GLP E++
Sbjct: 209 GL---TYGYNYGEAIDLSQPDVIYQSINDLLPAL-GLPHSENQ 247
>sp|P32662|GPH_ECOLI Phosphoglycolate phosphatase OS=Escherichia coli (strain K12)
GN=gph PE=1 SV=1
Length = 252
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 69 FHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCV 128
+ VV+G D V+ KP PD L+ A+R PQ + L D+ N + AKAAG V
Sbjct: 153 YFSVVIGGDD--VQNKKPHPDPLLLVAERMGIAPQ--QMLFVGDSRNDIQAAKAAGCPSV 208
Query: 129 MVPDPTVPKHRTEAADL-----VLNSLEEFKPELYGLPPFEDK 166
+ T + EA DL + S+ + P L GLP E++
Sbjct: 209 GL---TYGYNYGEAIDLSQPDVIYQSINDLLPAL-GLPHSENQ 247
>sp|P58422|GPH_ECO57 Phosphoglycolate phosphatase OS=Escherichia coli O157:H7 GN=gph
PE=3 SV=1
Length = 252
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 69 FHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCV 128
+ VV+G D V+ KP PD L+ A+R PQ + L D+ N + AKAAG V
Sbjct: 153 YFSVVIGGDD--VQNKKPHPDPLLLVAERMGIAPQ--QMLFVGDSRNDIQAAKAAGCPSV 208
Query: 129 MVPDPTVPKHRTEAADL-----VLNSLEEFKPELYGLPPFEDK 166
+ T + EA DL + S+ + P L GLP E++
Sbjct: 209 GL---TYGYNYGEAIDLSQPDVIYQSINDLLPAL-GLPHSENQ 247
>sp|Q83PX1|GPH_SHIFL Phosphoglycolate phosphatase OS=Shigella flexneri GN=SF3403 PE=3
SV=1
Length = 252
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 69 FHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCV 128
+ VV+G D V+ KP PD L+ A+R PQ + L D+ N + AKAAG V
Sbjct: 153 YFSVVIGGDD--VQNKKPHPDPLLLVAERMGIAPQ--QMLFVGDSRNDIQAAKAAGCPSV 208
Query: 129 MVPDPTVPKHRTEAADL-----VLNSLEEFKPELYGLPPFEDK 166
+ T + EA DL + S+ + P L GLP E++
Sbjct: 209 GL---TYGYNYGEAIDLSQPDVIYQSINDLLPAL-GLPHSENQ 247
>sp|Q2Y6G2|GPH_NITMU Phosphoglycolate phosphatase OS=Nitrosospira multiformis (strain
ATCC 25196 / NCIMB 11849) GN=Nmul_A2370 PE=3 SV=1
Length = 227
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 34 INHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLV 93
+N L A T+ A E+F L R + L F VV G + P + KP P L
Sbjct: 104 LNALRAGGFRLACVTNKA-EAFTLPLLRAAELLDYFDIVVSGDSLP---KKKPDPMPLLH 159
Query: 94 AAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVP 131
A +RF+ QP L+ D+ N A+AAG VP
Sbjct: 160 ACERFE--IQPHDMLLVGDSLNDAQAARAAGSHVFCVP 195
>sp|Q3B8E3|LHPP_XENLA Phospholysine phosphohistidine inorganic pyrophosphate phosphatase
OS=Xenopus laevis GN=lhpp PE=2 SV=1
Length = 270
Score = 36.2 bits (82), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 84 GKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPD----PTVPKHR 139
GKP+P+ FL A + KP+ + ++ +D + + GAK+ G+ V+V P+ KH
Sbjct: 186 GKPSPNFFLSALEEMGAKPEEA-LMIGDDIVHDIGGAKSCGLRAVLVRTGKYRPSDEKHP 244
Query: 140 TEAADLVLNSL 150
AD +N+L
Sbjct: 245 EVTADGYVNNL 255
>sp|Q8TWR2|Y970_METKA Uncharacterized HAD-hydrolase MK0970 OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
GN=MK0970 PE=3 SV=2
Length = 233
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 68 LFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSC 127
FH VV+ E+ KP P +F+ AA+R KP+ + V + + GA AGM
Sbjct: 138 FFHEVVISE---EIGVEKPNPKIFIEAARRLGVKPEEA-VYVGDRLDKDIRGANRAGMVT 193
Query: 128 VMV 130
V +
Sbjct: 194 VRI 196
>sp|P77366|PGMB_ECOLI Beta-phosphoglucomutase OS=Escherichia coli (strain K12) GN=ycjU
PE=1 SV=1
Length = 219
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 80 EVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMV 130
++K KP P++FL A PQ C+ EDA G+ A+GM V +
Sbjct: 142 QLKNSKPDPEIFLAACAGLGVPPQA--CIGIEDAQAGIDAINASGMRSVGI 190
>sp|Q4K4Z4|GPH_PSEF5 Phosphoglycolate phosphatase OS=Pseudomonas fluorescens (strain
Pf-5 / ATCC BAA-477) GN=PFL_5630 PE=3 SV=1
Length = 272
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 6/100 (6%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAP 88
GA + LHK + A+ T+ E F + F ++ G P Q KP P
Sbjct: 105 GARETLKWLHKQGVEMALITNK-PERFVAPLLDQMKIGRYFRWIIGGDTLP---QKKPDP 160
Query: 89 DVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCV 128
K P S+ L D+ + VL AKAAG+ CV
Sbjct: 161 AALFFVMK-MASVPA-SQSLFVGDSRSDVLAAKAAGVKCV 198
>sp|Q8R821|PPAX_THETN Putative pyrophosphatase PpaX OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=ppaX PE=3 SV=2
Length = 220
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 16/109 (14%)
Query: 33 LINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFH-----HVVLGSADPEVKQGKPA 87
++ L + I A+ TS +E K LKLF V++G D E + KP
Sbjct: 90 VLARLKEEGIKTAVVTSKRREL-------AKRGLKLFELDKYFDVLVGLEDTE--KHKPE 140
Query: 88 PDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVP 136
PD L A + K + L+ D+P +L A++AG+ V V +P
Sbjct: 141 PDPVLKALELL--KSPREEALMVGDSPYDILSARSAGVRSVAVKWSVLP 187
>sp|Q9S586|GPH1_PSEAE Phosphoglycolate phosphatase 1 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=gph1
PE=3 SV=1
Length = 272
Score = 33.9 bits (76), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 18/105 (17%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESF------ELKTSRHKDTLKLFHHVVLGSADPEVK 82
G + + L ++ + A+ T+ E F E+K R+ F ++ G P
Sbjct: 105 GVVDTLKWLKRNGVEMALITNK-PERFVAPLLDEMKLGRY------FRWIIGGDTLP--- 154
Query: 83 QGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSC 127
Q KP P L K +P L D+ N VL AKAAG+ C
Sbjct: 155 QQKPDPAALLFVMKM--AGIEPEDALFVGDSRNDVLAAKAAGVRC 197
>sp|P42509|GPH_PSEPU Probable phosphoglycolate phosphatase (Fragment) OS=Pseudomonas
putida GN=gph PE=3 SV=1
Length = 251
Score = 33.5 bits (75), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 6/95 (6%)
Query: 34 INHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLV 93
+ L K + A+ T+ E F + F ++ G P Q KP P L
Sbjct: 89 LRWLQKQGVEMALITNK-PERFVAPLLDQMKIGRYFRWMIGGDTLP---QKKPDPAALLF 144
Query: 94 AAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCV 128
+ PQ S L D+ + VL AKAAG+ CV
Sbjct: 145 VMQMAGVTPQQS--LFVGDSRSDVLAAKAAGVQCV 177
>sp|P40106|GPP2_YEAST (DL)-glycerol-3-phosphatase 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HOR2 PE=1 SV=1
Length = 250
Score = 33.1 bits (74), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 25/97 (25%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKD-TLKLFHHVVLGSADP-------E 80
GA++L N L+ + KE + + TS +D K F H LG P +
Sbjct: 95 GAVKLCNALN----------ALPKEKWAVATSGTRDMAQKWFEH--LGIRRPKYFITAND 142
Query: 81 VKQGKPAPDVFLVAAKRF-----DEKPQPSKCLVFED 112
VKQGKP P+ +L ++ P SK +VFED
Sbjct: 143 VKQGKPHPEPYLKGRNGLGYPINEQDPSKSKVVVFED 179
>sp|P41277|GPP1_YEAST (DL)-glycerol-3-phosphatase 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RHR2 PE=1 SV=3
Length = 250
Score = 33.1 bits (74), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 29 GALRLINHLHKHNIP---FAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGK 85
GA++L N L+ +P +A+ATS ++ + D LK+ +A+ +VKQGK
Sbjct: 95 GAVKLCNALNA--LPKEKWAVATSGTRDM----AKKWFDILKIKRPEYFITAN-DVKQGK 147
Query: 86 PAPDVFLVAAKRF-----DEKPQPSKCLVFED 112
P P+ +L ++ P SK +VFED
Sbjct: 148 PHPEPYLKGRNGLGFPINEQDPSKSKVVVFED 179
>sp|Q49741|Y393_MYCLE Uncharacterized protein ML0393 OS=Mycobacterium leprae (strain TN)
GN=ML0393 PE=4 SV=1
Length = 261
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 6/43 (13%)
Query: 84 GKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMS 126
GKPAPD +L A+ D P + VFEDA +GV AG+S
Sbjct: 188 GKPAPDSYLRGAQLLDVAPDAAA--VFEDALSGV----QAGLS 224
>sp|Q7NA60|GPH_PHOLL Phosphoglycolate phosphatase OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=plu0085 PE=3 SV=1
Length = 234
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 34 INHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLV 93
+ L KHN+P I T+ K + + + + +VLG D VK+ KP P +
Sbjct: 105 LAELAKHNLPMGIITN--KPTPFIAPLLASLDISEYFSLVLGGDD--VKEKKPHPAPIYL 160
Query: 94 AAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCV 128
F + + + L D+ N +L A+AAG CV
Sbjct: 161 TMGTFGLRKE--ELLFVGDSRNDILAAQAAGCPCV 193
>sp|P38774|DOG1_YEAST 2-deoxyglucose-6-phosphate phosphatase 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DOG1 PE=1
SV=1
Length = 246
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 80 EVKQGKPAPDVFLVAAKRFDEKPQPS-----KCLVFEDAPNGVLGAKAAGMSCVMV 130
+VK GKP P+ + A + Q + K +VFEDAP G+ KA G V +
Sbjct: 146 DVKNGKPDPEGYSRARDLLRQDLQLTGKQDLKYVVFEDAPVGIKAGKAMGAITVGI 201
>sp|Q3K5U8|GPH_PSEPF Phosphoglycolate phosphatase OS=Pseudomonas fluorescens (strain
Pf0-1) GN=Pfl01_5119 PE=3 SV=1
Length = 272
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAP 88
G + LHK + A+ T+ E F + F ++ G P Q KP P
Sbjct: 105 GVRDTLKWLHKQGVAMALITNK-PERFVAPLLDQMKIGRYFKWIIGGDTLP---QKKPDP 160
Query: 89 DVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCV 128
K S+ L D+ + VL AKAAG+ CV
Sbjct: 161 AALFFVMKM--SGIPASQSLFVGDSRSDVLAAKAAGVKCV 198
>sp|P38773|DOG2_YEAST 2-deoxyglucose-6-phosphate phosphatase 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DOG2 PE=1
SV=1
Length = 246
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 80 EVKQGKPAPDVFLVAAKRFDEKPQPS-----KCLVFEDAPNGVLGAKAAGMSCVMV 130
+VK GKP P+ + A + Q + K +VFEDAP G+ KA G V +
Sbjct: 146 DVKNGKPDPEGYSRARDLLRQDLQLTGKQDLKYVVFEDAPVGIKAGKAMGAITVGI 201
>sp|O59346|Y1655_PYRHO Uncharacterized HAD-hydrolase PH1655 OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=PH1655 PE=1 SV=1
Length = 241
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 68 LFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSC 127
F HV++ + VK KP P +F A K F+ KP+ + +V + + + GAK GM
Sbjct: 136 FFEHVIISDFEG-VK--KPHPKIFKKALKAFNVKPEEA-LMVGDRLYSDIYGAKRVGMKT 191
Query: 128 VM 129
V
Sbjct: 192 VW 193
>sp|O25671|FUR_HELPY Ferric uptake regulation protein OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=fur PE=1 SV=1
Length = 150
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 10 VTHVIFDMDGLLLGYNLAIGAL-RLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKL 68
+TH I D N +I ++ R++N L K N + TS + +E+ H D +
Sbjct: 48 ITHSIRQKDK-----NTSISSVYRILNFLEKENFICVLETSKSGRRYEIAAKEHHDHIIC 102
Query: 69 FHH-VVLGSADPEVK 82
H ++ ADPE++
Sbjct: 103 LHCGKIIEFADPEIE 117
>sp|Q4L4U2|NAGD_STAHJ Protein NagD homolog OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=nagD PE=3 SV=1
Length = 263
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 8 NYVTHVIFDMDG-LLLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKD 64
NY ++I D+DG + LG + GA + I++L+ H IP T+++ ++ E T + K+
Sbjct: 3 NYKGYLI-DLDGTMYLGTDEIDGAAQFIDYLNNHQIPHLYVTNNSTKTPEEVTQKLKE 59
>sp|Q9ZM26|FUR_HELPJ Ferric uptake regulation protein OS=Helicobacter pylori (strain
J99) GN=fur PE=3 SV=1
Length = 150
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 10 VTHVIFDMDGLLLGYNLAIGAL-RLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKL 68
+TH I D N +I ++ R++N L K N + TS + +E+ H D +
Sbjct: 48 ITHSIRQKDK-----NTSISSVYRILNFLEKENFICVLETSKSGRRYEIAAKEHHDHIIC 102
Query: 69 FHH-VVLGSADPEVK 82
H ++ ADPE++
Sbjct: 103 LHCGKIIEFADPEIE 117
>sp|A1S4E6|MUTS_SHEAM DNA mismatch repair protein MutS OS=Shewanella amazonensis (strain
ATCC BAA-1098 / SB2B) GN=mutS PE=3 SV=1
Length = 854
Score = 30.8 bits (68), Expect = 3.8, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 12/92 (13%)
Query: 57 LKTSRHKDTLKLFHHVVLGSADP----EVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFED 112
L H DT+ H V G+A +V P + AAK K L E
Sbjct: 751 LDAIEHDDTIAFMHAVQEGAASKSYGLQVAALAGVPANVIKAAKH--------KLLQLES 802
Query: 113 APNGVLGAKAAGMSCVMVPDPTVPKHRTEAAD 144
+GV +K + M P+P+ + R EA D
Sbjct: 803 RDHGVDMSKQQALPLTMTPEPSAAELRLEAID 834
>sp|Q4ZNZ8|SECA_PSEU2 Protein translocase subunit SecA OS=Pseudomonas syringae pv.
syringae (strain B728a) GN=secA PE=3 SV=1
Length = 913
Score = 30.8 bits (68), Expect = 4.0, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 52 KESF----ELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAK-RFDEKPQP 104
+ESF EL S +DT+++ HV + DPE ++ + D +A++ +F+ P P
Sbjct: 805 RESFTLFQELLDSIKRDTIRVLSHVQVRREDPEEEEARLRQDAEELASRMQFEHAPAP 862
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,166,427
Number of Sequences: 539616
Number of extensions: 2734570
Number of successful extensions: 5821
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 5765
Number of HSP's gapped (non-prelim): 68
length of query: 166
length of database: 191,569,459
effective HSP length: 109
effective length of query: 57
effective length of database: 132,751,315
effective search space: 7566824955
effective search space used: 7566824955
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)