Query psy6288
Match_columns 166
No_of_seqs 106 out of 1664
Neff 9.5
Searched_HMMs 29240
Date Fri Aug 16 22:36:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6288.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6288hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l5k_A Protein GS1, haloacid d 99.9 1.6E-24 5.4E-29 159.6 16.3 142 20-164 107-250 (250)
2 4g9b_A Beta-PGM, beta-phosphog 99.9 5.6E-25 1.9E-29 162.4 13.5 126 24-157 94-221 (243)
3 3kbb_A Phosphorylated carbohyd 99.9 2.2E-24 7.6E-29 155.6 13.3 130 23-158 82-213 (216)
4 3ib6_A Uncharacterized protein 99.9 4E-24 1.4E-28 152.4 13.1 131 22-158 31-175 (189)
5 3s6j_A Hydrolase, haloacid deh 99.9 2E-23 6.8E-28 151.4 15.4 135 20-160 86-222 (233)
6 2ah5_A COG0546: predicted phos 99.9 1.5E-23 5E-28 151.3 14.5 126 23-157 82-209 (210)
7 3l8h_A Putative haloacid dehal 99.9 3E-24 1E-28 151.3 10.0 129 23-159 25-177 (179)
8 4gib_A Beta-phosphoglucomutase 99.9 1.5E-23 5E-28 155.3 13.9 124 22-157 113-237 (250)
9 3mc1_A Predicted phosphatase, 99.9 2.1E-23 7.1E-28 151.0 14.1 135 22-162 83-219 (226)
10 2hi0_A Putative phosphoglycola 99.9 3.2E-23 1.1E-27 152.2 15.1 131 22-159 107-239 (240)
11 3umb_A Dehalogenase-like hydro 99.9 3.2E-23 1.1E-27 150.6 14.5 134 22-161 96-230 (233)
12 4ex6_A ALNB; modified rossman 99.9 3.3E-23 1.1E-27 151.1 14.4 132 22-159 101-234 (237)
13 3um9_A Haloacid dehalogenase, 99.9 6.3E-23 2.1E-27 148.7 15.4 134 22-161 93-227 (230)
14 2nyv_A Pgpase, PGP, phosphogly 99.9 8.7E-23 3E-27 148.4 15.8 131 22-159 80-210 (222)
15 2pib_A Phosphorylated carbohyd 99.9 5.5E-23 1.9E-27 147.0 14.2 130 24-159 83-214 (216)
16 2no4_A (S)-2-haloacid dehaloge 99.9 1.3E-22 4.3E-27 148.6 16.0 133 22-160 102-235 (240)
17 3sd7_A Putative phosphatase; s 99.9 8.6E-23 2.9E-27 149.4 14.8 131 22-158 107-240 (240)
18 3e58_A Putative beta-phosphogl 99.9 2E-22 6.7E-27 143.9 15.3 127 24-157 88-214 (214)
19 3qxg_A Inorganic pyrophosphata 99.9 6.8E-23 2.3E-27 150.3 13.0 130 23-159 107-240 (243)
20 3dv9_A Beta-phosphoglucomutase 99.9 1.4E-22 4.8E-27 148.3 14.0 130 23-159 106-239 (247)
21 3vay_A HAD-superfamily hydrola 99.9 1.9E-22 6.6E-27 146.2 14.3 133 15-159 95-228 (230)
22 1zrn_A L-2-haloacid dehalogena 99.9 2.3E-22 7.8E-27 146.3 14.7 132 23-160 93-225 (232)
23 3m9l_A Hydrolase, haloacid deh 99.9 3.4E-22 1.1E-26 143.2 14.6 133 21-162 66-200 (205)
24 2oda_A Hypothetical protein ps 99.9 1.2E-22 4.2E-27 145.8 11.9 124 24-158 35-184 (196)
25 2hdo_A Phosphoglycolate phosph 99.9 2.6E-22 8.8E-27 144.0 13.5 129 22-157 80-208 (209)
26 2hsz_A Novel predicted phospha 99.9 1.3E-21 4.4E-26 144.1 17.3 130 22-157 111-242 (243)
27 3k1z_A Haloacid dehalogenase-l 99.9 3E-22 1E-26 149.1 13.9 129 24-159 105-237 (263)
28 1yns_A E-1 enzyme; hydrolase f 99.9 7.2E-22 2.5E-26 147.4 15.8 126 22-154 127-256 (261)
29 2hoq_A Putative HAD-hydrolase 99.9 2.6E-22 8.9E-27 147.1 13.1 132 23-160 92-227 (241)
30 2gmw_A D,D-heptose 1,7-bisphos 99.9 2.8E-22 9.6E-27 145.2 12.6 131 24-159 49-205 (211)
31 4eek_A Beta-phosphoglucomutase 99.9 2.5E-22 8.7E-27 148.5 12.4 134 22-161 107-248 (259)
32 2gfh_A Haloacid dehalogenase-l 99.9 6.4E-22 2.2E-26 147.4 14.3 131 22-159 118-251 (260)
33 3qnm_A Haloacid dehalogenase-l 99.9 1.2E-21 4.2E-26 142.4 15.5 130 22-159 104-234 (240)
34 3iru_A Phoshonoacetaldehyde hy 99.9 1E-21 3.6E-26 145.9 14.7 131 23-159 109-266 (277)
35 2om6_A Probable phosphoserine 99.9 1.2E-21 4.1E-26 142.0 13.9 131 24-160 98-232 (235)
36 2o2x_A Hypothetical protein; s 99.9 3.8E-22 1.3E-26 145.0 10.8 135 24-163 55-215 (218)
37 3kzx_A HAD-superfamily hydrola 99.9 3.1E-21 1.1E-25 140.2 14.8 127 22-159 100-227 (231)
38 3ed5_A YFNB; APC60080, bacillu 99.9 6.6E-21 2.3E-25 138.5 16.3 133 23-161 101-234 (238)
39 3u26_A PF00702 domain protein; 99.9 5.2E-22 1.8E-26 144.1 10.3 131 23-160 98-229 (234)
40 3nas_A Beta-PGM, beta-phosphog 99.9 1E-21 3.4E-26 142.8 11.3 118 25-154 92-209 (233)
41 1qq5_A Protein (L-2-haloacid d 99.9 3.8E-21 1.3E-25 142.1 14.3 132 22-161 90-245 (253)
42 3nuq_A Protein SSM1, putative 99.9 1.1E-20 3.6E-25 141.7 15.9 135 22-159 139-280 (282)
43 2w43_A Hypothetical 2-haloalka 99.9 4.7E-21 1.6E-25 136.8 12.5 128 22-159 71-199 (201)
44 1te2_A Putative phosphatase; s 99.9 3.1E-20 1.1E-24 133.6 16.6 130 23-158 92-222 (226)
45 1qyi_A ZR25, hypothetical prot 99.9 1.8E-21 6E-26 152.4 10.5 136 24-163 214-379 (384)
46 2pr7_A Haloacid dehalogenase/e 99.9 1.7E-21 5.8E-26 130.9 9.1 114 15-134 7-121 (137)
47 3smv_A S-(-)-azetidine-2-carbo 99.9 7E-21 2.4E-25 138.2 12.5 129 22-159 96-236 (240)
48 3ddh_A Putative haloacid dehal 99.8 1.7E-20 6E-25 135.4 13.5 125 22-157 102-233 (234)
49 2go7_A Hydrolase, haloacid deh 99.8 2.1E-20 7E-25 132.6 13.3 124 22-158 82-205 (207)
50 3d6j_A Putative haloacid dehal 99.8 6E-20 2E-24 132.0 15.4 134 23-162 87-222 (225)
51 3umg_A Haloacid dehalogenase; 99.8 1.7E-20 5.8E-25 137.4 11.5 130 22-160 113-249 (254)
52 3umc_A Haloacid dehalogenase; 99.8 2.4E-20 8.3E-25 137.0 12.1 129 22-159 117-252 (254)
53 1swv_A Phosphonoacetaldehyde h 99.8 1.4E-19 4.7E-24 134.2 13.8 132 22-159 100-258 (267)
54 2hcf_A Hydrolase, haloacid deh 99.8 5E-20 1.7E-24 133.6 11.0 133 23-159 91-227 (234)
55 2fpr_A Histidine biosynthesis 99.8 1.8E-20 6.2E-25 132.2 7.2 104 23-134 40-163 (176)
56 2g80_A Protein UTR4; YEL038W, 99.8 1.8E-19 6.1E-24 134.1 12.8 121 23-153 123-253 (253)
57 2wf7_A Beta-PGM, beta-phosphog 99.8 2.9E-19 9.8E-24 128.4 13.6 119 24-154 90-208 (221)
58 3cnh_A Hydrolase family protei 99.8 1.9E-19 6.6E-24 128.1 10.5 105 23-134 84-188 (200)
59 4dcc_A Putative haloacid dehal 99.8 3.1E-19 1.1E-23 129.8 10.4 107 25-137 112-223 (229)
60 2pke_A Haloacid delahogenase-l 99.8 5E-19 1.7E-23 130.3 11.5 126 22-159 109-242 (251)
61 2fdr_A Conserved hypothetical 99.8 2.2E-19 7.6E-24 129.8 9.4 133 23-164 85-226 (229)
62 2zg6_A Putative uncharacterize 99.8 2.1E-20 7.3E-25 135.4 4.0 122 24-159 94-216 (220)
63 2qlt_A (DL)-glycerol-3-phospha 99.8 9.2E-19 3.1E-23 131.0 12.9 128 22-156 111-247 (275)
64 2i6x_A Hydrolase, haloacid deh 99.8 4.3E-19 1.5E-23 127.1 9.9 104 24-134 88-197 (211)
65 2b0c_A Putative phosphatase; a 99.8 1E-19 3.4E-24 129.9 6.4 106 24-134 90-195 (206)
66 3m1y_A Phosphoserine phosphata 99.8 3.5E-19 1.2E-23 128.0 8.8 132 19-157 69-209 (217)
67 2wm8_A MDP-1, magnesium-depend 99.8 1.2E-18 4E-23 123.7 9.9 102 24-136 67-169 (187)
68 3i28_A Epoxide hydrolase 2; ar 99.8 1.9E-18 6.5E-23 138.7 10.6 109 21-134 96-207 (555)
69 1yv9_A Hydrolase, haloacid deh 99.8 1.6E-19 5.4E-24 134.2 3.8 126 23-155 124-256 (264)
70 2fi1_A Hydrolase, haloacid deh 99.8 1.5E-17 5.3E-22 117.0 13.2 103 23-134 80-182 (190)
71 1nnl_A L-3-phosphoserine phosp 99.8 1.1E-18 3.6E-23 126.6 7.3 126 23-157 84-223 (225)
72 2hx1_A Predicted sugar phospha 99.8 1.6E-19 5.6E-24 135.7 2.7 120 28-153 148-283 (284)
73 1zjj_A Hypothetical protein PH 99.8 4.1E-19 1.4E-23 132.3 4.6 127 24-159 129-262 (263)
74 2oyc_A PLP phosphatase, pyrido 99.8 3.6E-19 1.2E-23 135.3 3.9 131 24-160 155-299 (306)
75 2ho4_A Haloacid dehalogenase-l 99.7 5.3E-19 1.8E-23 130.5 4.5 126 25-158 122-255 (259)
76 4eze_A Haloacid dehalogenase-l 99.7 4.6E-18 1.6E-22 130.2 9.0 133 20-159 174-315 (317)
77 2p11_A Hypothetical protein; p 99.7 2.9E-18 9.8E-23 125.1 7.1 124 23-160 94-225 (231)
78 2fea_A 2-hydroxy-3-keto-5-meth 99.7 1.6E-18 5.6E-23 127.0 3.9 125 23-159 75-217 (236)
79 3kd3_A Phosphoserine phosphohy 99.7 7.7E-17 2.6E-21 115.2 10.4 130 24-158 81-219 (219)
80 1vjr_A 4-nitrophenylphosphatas 99.7 4.2E-18 1.5E-22 126.8 3.9 127 24-157 136-270 (271)
81 1rku_A Homoserine kinase; phos 99.7 3E-17 1E-21 117.3 8.0 127 21-158 65-197 (206)
82 2c4n_A Protein NAGD; nucleotid 99.7 4.5E-18 1.5E-22 124.0 2.8 126 23-155 85-249 (250)
83 1ltq_A Polynucleotide kinase; 99.7 1.3E-16 4.3E-21 120.9 10.7 101 24-133 187-299 (301)
84 2b82_A APHA, class B acid phos 99.7 3.7E-17 1.3E-21 118.4 4.9 103 25-136 88-190 (211)
85 3n28_A Phosphoserine phosphata 99.7 2.7E-16 9.3E-21 120.9 8.5 132 22-158 175-313 (335)
86 2p9j_A Hypothetical protein AQ 99.7 4.2E-16 1.4E-20 107.8 8.6 124 11-152 10-145 (162)
87 3p96_A Phosphoserine phosphata 99.6 2.1E-16 7.3E-21 124.9 7.1 129 22-157 253-390 (415)
88 1l7m_A Phosphoserine phosphata 99.6 1.1E-15 3.8E-20 108.8 9.8 129 22-157 73-210 (211)
89 3n1u_A Hydrolase, HAD superfam 99.6 5.9E-17 2E-21 115.6 3.0 131 11-159 20-168 (191)
90 3qgm_A P-nitrophenyl phosphata 99.6 2.4E-15 8.3E-20 111.7 11.2 76 81-158 183-267 (268)
91 3zvl_A Bifunctional polynucleo 99.6 2E-15 6.9E-20 119.5 10.5 100 26-131 88-218 (416)
92 4ap9_A Phosphoserine phosphata 99.6 8.3E-16 2.9E-20 108.6 6.9 129 18-161 72-200 (201)
93 3e8m_A Acylneuraminate cytidyl 99.6 1.1E-15 3.9E-20 105.8 7.3 108 33-158 39-152 (164)
94 3epr_A Hydrolase, haloacid deh 99.6 6.6E-15 2.3E-19 109.4 11.3 74 80-155 177-255 (264)
95 2x4d_A HLHPP, phospholysine ph 99.6 1.3E-15 4.4E-20 112.5 5.1 127 26-159 132-267 (271)
96 3a1c_A Probable copper-exporti 99.6 1.1E-14 3.9E-19 109.7 8.9 117 23-160 161-279 (287)
97 3n07_A 3-deoxy-D-manno-octulos 99.6 8.6E-16 3E-20 109.9 2.1 131 11-159 26-174 (195)
98 2yj3_A Copper-transporting ATP 99.3 3.4E-16 1.2E-20 116.8 0.0 116 23-158 134-251 (263)
99 1k1e_A Deoxy-D-mannose-octulos 99.5 2.2E-14 7.7E-19 101.0 8.8 107 26-150 36-142 (180)
100 3mmz_A Putative HAD family hyd 99.5 5.1E-14 1.7E-18 99.0 10.5 108 33-159 47-160 (176)
101 2r8e_A 3-deoxy-D-manno-octulos 99.5 2.6E-14 8.7E-19 101.5 8.9 109 32-158 60-174 (188)
102 3mn1_A Probable YRBI family ph 99.5 2.8E-14 9.6E-19 101.4 8.9 108 33-158 54-167 (189)
103 3nvb_A Uncharacterized protein 99.5 2.9E-14 9.8E-19 111.2 8.8 97 25-132 256-358 (387)
104 3ij5_A 3-deoxy-D-manno-octulos 99.5 2.9E-14 1E-18 103.2 7.6 108 33-158 84-197 (211)
105 1q92_A 5(3)-deoxyribonucleotid 99.5 4.2E-16 1.4E-20 111.3 -2.4 116 23-162 73-196 (197)
106 3fvv_A Uncharacterized protein 99.5 3.5E-13 1.2E-17 97.6 11.3 105 25-130 92-204 (232)
107 2i7d_A 5'(3')-deoxyribonucleot 99.5 8.4E-16 2.9E-20 109.3 -3.3 112 22-157 70-189 (193)
108 3skx_A Copper-exporting P-type 99.5 2.2E-14 7.4E-19 106.7 3.3 113 25-158 144-258 (280)
109 3pdw_A Uncharacterized hydrola 99.5 3.1E-14 1.1E-18 105.7 3.8 127 25-158 126-259 (266)
110 3ewi_A N-acylneuraminate cytid 99.3 2.2E-12 7.6E-17 90.1 7.3 106 33-158 44-156 (168)
111 3gyg_A NTD biosynthesis operon 99.3 2.6E-12 8.9E-17 96.5 5.8 119 25-152 122-272 (289)
112 3bwv_A Putative 5'(3')-deoxyri 99.3 1.4E-11 4.7E-16 86.4 9.1 107 22-159 66-177 (180)
113 2hhl_A CTD small phosphatase-l 99.3 1.7E-13 5.7E-18 98.0 -1.4 98 24-131 67-164 (195)
114 2ght_A Carboxy-terminal domain 99.2 5.9E-13 2E-17 94.1 -1.3 95 24-128 54-148 (181)
115 2i33_A Acid phosphatase; HAD s 99.2 3.2E-11 1.1E-15 89.7 7.2 99 24-135 100-219 (258)
116 2jc9_A Cytosolic purine 5'-nuc 99.1 3.7E-10 1.3E-14 91.0 10.5 106 25-133 246-393 (555)
117 3kc2_A Uncharacterized protein 99.1 1.4E-10 4.7E-15 89.8 5.9 78 82-159 243-349 (352)
118 2rbk_A Putative uncharacterize 99.1 8.9E-10 3.1E-14 81.4 9.6 130 24-158 84-256 (261)
119 4dw8_A Haloacid dehalogenase-l 98.9 6.3E-09 2.2E-13 77.3 9.5 66 82-152 193-258 (279)
120 1wr8_A Phosphoglycolate phosph 98.9 4.9E-09 1.7E-13 76.2 8.3 116 28-152 84-214 (231)
121 3j08_A COPA, copper-exporting 98.9 8.2E-09 2.8E-13 85.8 8.8 114 23-157 455-570 (645)
122 1l6r_A Hypothetical protein TA 98.8 1E-08 3.4E-13 74.6 8.2 130 15-151 10-213 (227)
123 3dnp_A Stress response protein 98.8 4.3E-08 1.5E-12 73.2 9.7 66 82-152 198-263 (290)
124 1rlm_A Phosphatase; HAD family 98.8 6.2E-09 2.1E-13 77.4 4.7 107 38-152 143-252 (271)
125 3ocu_A Lipoprotein E; hydrolas 98.7 3.3E-09 1.1E-13 78.7 2.8 85 23-119 99-188 (262)
126 3fzq_A Putative hydrolase; YP_ 98.7 3.7E-08 1.2E-12 72.8 8.5 67 81-152 195-261 (274)
127 3pct_A Class C acid phosphatas 98.7 6.2E-09 2.1E-13 77.2 4.0 98 23-132 99-209 (260)
128 3mpo_A Predicted hydrolase of 98.7 2.3E-08 7.8E-13 74.3 6.6 61 86-151 197-257 (279)
129 3j09_A COPA, copper-exporting 98.7 6.4E-08 2.2E-12 81.4 9.6 114 23-157 533-648 (723)
130 4g63_A Cytosolic IMP-GMP speci 98.6 4.9E-07 1.7E-11 72.0 11.2 107 26-134 187-327 (470)
131 3dao_A Putative phosphatse; st 98.6 1.5E-07 5E-12 70.3 7.0 112 39-157 164-279 (283)
132 3rfu_A Copper efflux ATPase; a 98.5 2.2E-07 7.5E-12 78.2 6.8 114 23-156 552-667 (736)
133 3ar4_A Sarcoplasmic/endoplasmi 98.5 2.4E-07 8.3E-12 80.4 7.1 126 23-157 601-748 (995)
134 3l7y_A Putative uncharacterize 98.4 8.7E-07 3E-11 66.7 8.6 64 84-152 226-289 (304)
135 4fe3_A Cytosolic 5'-nucleotida 98.4 2.6E-07 8.7E-12 69.6 4.2 101 23-126 139-252 (297)
136 2pq0_A Hypothetical conserved 98.4 4.4E-06 1.5E-10 61.2 10.8 61 87-152 184-244 (258)
137 3r4c_A Hydrolase, haloacid deh 98.3 2.6E-06 8.7E-11 62.7 7.4 65 83-152 191-255 (268)
138 4gxt_A A conserved functionall 98.2 8.7E-06 3E-10 63.7 9.4 100 24-124 220-332 (385)
139 3pgv_A Haloacid dehalogenase-l 98.2 8.7E-07 3E-11 66.1 3.6 56 84-144 207-262 (285)
140 2zxe_A Na, K-ATPase alpha subu 98.1 9.1E-06 3.1E-10 70.9 8.0 126 23-156 597-766 (1028)
141 1nf2_A Phosphatase; structural 98.1 3.3E-06 1.1E-10 62.5 4.3 70 84-158 188-259 (268)
142 3zx4_A MPGP, mannosyl-3-phosph 97.9 6.1E-06 2.1E-10 60.6 3.9 46 85-133 175-222 (259)
143 1nrw_A Hypothetical protein, h 97.9 9.1E-06 3.1E-10 60.6 4.8 62 86-152 216-277 (288)
144 1mhs_A Proton pump, plasma mem 97.9 3E-05 1E-09 66.8 8.3 127 23-155 533-676 (920)
145 3qle_A TIM50P; chaperone, mito 97.9 1.2E-06 4.1E-11 62.7 -0.4 97 24-130 58-155 (204)
146 1rkq_A Hypothetical protein YI 97.9 1.2E-05 4E-10 60.0 4.7 64 84-152 196-259 (282)
147 1y8a_A Hypothetical protein AF 97.8 2.7E-05 9.1E-10 59.4 5.2 113 24-149 102-266 (332)
148 3ixz_A Potassium-transporting 97.7 5.2E-05 1.8E-09 66.2 6.8 103 23-128 602-743 (1034)
149 2b30_A Pvivax hypothetical pro 97.6 3.9E-05 1.4E-09 57.8 4.0 62 84-150 222-284 (301)
150 3b8c_A ATPase 2, plasma membra 97.6 5.5E-05 1.9E-09 65.0 5.1 128 23-156 486-631 (885)
151 1s2o_A SPP, sucrose-phosphatas 97.5 5E-05 1.7E-09 55.4 3.3 64 84-152 160-230 (244)
152 2zos_A MPGP, mannosyl-3-phosph 97.4 6.8E-05 2.3E-09 54.8 3.0 64 85-152 178-242 (249)
153 3kc2_A Uncharacterized protein 97.4 0.00052 1.8E-08 52.9 8.0 99 13-130 16-118 (352)
154 3ef0_A RNA polymerase II subun 97.3 0.00013 4.3E-09 56.8 3.6 80 23-115 73-155 (372)
155 2hx1_A Predicted sugar phospha 96.9 0.00072 2.4E-08 50.0 4.0 105 5-127 9-119 (284)
156 1zjj_A Hypothetical protein PH 96.8 0.0044 1.5E-07 45.3 7.3 96 15-127 6-105 (263)
157 4as2_A Phosphorylcholine phosp 96.7 0.017 5.9E-07 44.0 10.4 37 24-61 142-178 (327)
158 1xvi_A MPGP, YEDP, putative ma 96.3 0.0018 6.3E-08 47.8 2.7 49 84-134 187-237 (275)
159 3geb_A EYES absent homolog 2; 96.3 0.085 2.9E-06 38.5 10.8 88 33-132 167-258 (274)
160 3shq_A UBLCP1; phosphatase, hy 96.1 0.00073 2.5E-08 51.5 -0.6 98 25-129 164-272 (320)
161 3ef1_A RNA polymerase II subun 95.9 0.0047 1.6E-07 48.9 3.0 79 24-115 82-163 (442)
162 2fue_A PMM 1, PMMH-22, phospho 95.9 0.0053 1.8E-07 44.9 3.1 57 87-150 198-258 (262)
163 3pdw_A Uncharacterized hydrola 95.3 0.23 7.8E-06 35.8 10.3 61 14-75 10-74 (266)
164 2oyc_A PLP phosphatase, pyrido 94.7 0.018 6E-07 43.0 2.9 65 10-75 21-90 (306)
165 2obb_A Hypothetical protein; s 94.7 0.054 1.9E-06 36.2 4.9 37 15-51 8-50 (142)
166 2q5c_A NTRC family transcripti 93.7 0.28 9.5E-06 34.4 7.2 90 28-134 81-170 (196)
167 1rkq_A Hypothetical protein YI 93.4 0.17 5.8E-06 37.1 5.9 61 14-75 9-71 (282)
168 3f9r_A Phosphomannomutase; try 93.2 0.17 5.7E-06 36.6 5.5 44 15-58 9-54 (246)
169 2pju_A Propionate catabolism o 92.8 0.44 1.5E-05 34.2 7.1 86 29-131 94-179 (225)
170 1xpj_A Hypothetical protein; s 92.5 0.16 5.5E-06 32.8 4.2 29 25-53 24-52 (126)
171 1xvi_A MPGP, YEDP, putative ma 92.2 0.22 7.7E-06 36.4 5.1 53 14-67 13-67 (275)
172 1vjr_A 4-nitrophenylphosphatas 92.1 0.25 8.6E-06 35.6 5.2 61 13-74 20-84 (271)
173 3mpo_A Predicted hydrolase of 91.4 0.42 1.4E-05 34.6 5.8 62 13-75 8-71 (279)
174 1u02_A Trehalose-6-phosphate p 91.0 0.27 9.4E-06 35.2 4.4 26 107-133 174-201 (239)
175 4dw8_A Haloacid dehalogenase-l 90.9 0.6 2E-05 33.8 6.2 53 13-66 8-62 (279)
176 2b30_A Pvivax hypothetical pro 90.7 0.34 1.2E-05 36.0 4.8 47 13-59 30-79 (301)
177 1wr8_A Phosphoglycolate phosph 90.6 0.53 1.8E-05 33.3 5.6 52 14-66 7-60 (231)
178 2amy_A PMM 2, phosphomannomuta 90.4 0.12 4.1E-06 37.1 2.0 41 88-133 190-234 (246)
179 2zos_A MPGP, mannosyl-3-phosph 89.9 0.36 1.2E-05 34.7 4.2 50 16-66 8-57 (249)
180 3pgv_A Haloacid dehalogenase-l 88.4 0.59 2E-05 34.1 4.5 54 13-67 24-79 (285)
181 3luf_A Two-component system re 87.8 2.5 8.5E-05 30.4 7.5 86 31-133 64-157 (259)
182 3dao_A Putative phosphatse; st 87.7 0.86 2.9E-05 33.2 5.0 53 13-66 24-79 (283)
183 1nrw_A Hypothetical protein, h 86.4 1.1 3.6E-05 32.8 4.9 53 14-67 8-62 (288)
184 1u02_A Trehalose-6-phosphate p 86.3 0.58 2E-05 33.4 3.4 43 15-58 6-55 (239)
185 3dnp_A Stress response protein 83.9 1.3 4.6E-05 32.1 4.4 53 13-66 9-63 (290)
186 2pq0_A Hypothetical conserved 83.3 1.8 6.3E-05 30.8 4.9 52 14-66 7-60 (258)
187 1rlm_A Phosphatase; HAD family 81.5 0.95 3.2E-05 32.8 2.8 42 15-56 8-52 (271)
188 1yv9_A Hydrolase, haloacid deh 81.5 2.3 7.7E-05 30.3 4.8 63 13-75 8-74 (264)
189 2ho4_A Haloacid dehalogenase-l 81.1 2.4 8.2E-05 29.9 4.8 53 13-66 10-66 (259)
190 1nf2_A Phosphatase; structural 80.8 2 6.9E-05 31.0 4.4 51 15-67 7-59 (268)
191 3fzq_A Putative hydrolase; YP_ 80.4 1.7 6E-05 31.0 3.9 52 14-66 9-62 (274)
192 2rbk_A Putative uncharacterize 79.8 2.1 7.2E-05 30.6 4.2 41 14-55 6-49 (261)
193 2x4d_A HLHPP, phospholysine ph 79.6 2.5 8.7E-05 29.8 4.5 54 12-66 14-75 (271)
194 3zx4_A MPGP, mannosyl-3-phosph 78.4 1.9 6.4E-05 30.9 3.5 42 15-56 5-47 (259)
195 3f9r_A Phosphomannomutase; try 77.9 1.4 4.7E-05 31.7 2.6 30 103-132 198-231 (246)
196 1wv2_A Thiazole moeity, thiazo 77.7 18 0.00063 26.5 11.6 95 25-134 116-219 (265)
197 3r4c_A Hydrolase, haloacid deh 75.9 3 0.0001 29.8 4.0 43 13-55 15-60 (268)
198 4hwg_A UDP-N-acetylglucosamine 75.7 6 0.00021 30.4 5.9 95 31-134 26-127 (385)
199 3l7y_A Putative uncharacterize 75.2 2.6 9.1E-05 30.9 3.6 45 13-57 40-87 (304)
200 3dzc_A UDP-N-acetylglucosamine 73.6 5.8 0.0002 30.5 5.3 96 31-134 42-145 (396)
201 3can_A Pyruvate-formate lyase- 72.9 3.8 0.00013 27.7 3.7 30 23-52 13-43 (182)
202 2amy_A PMM 2, phosphomannomuta 72.4 4.5 0.00015 28.6 4.2 40 15-55 11-52 (246)
203 2z2u_A UPF0026 protein MJ0257; 72.2 12 0.00042 27.5 6.7 31 22-52 137-167 (311)
204 2fue_A PMM 1, PMMH-22, phospho 69.8 5.4 0.00018 28.6 4.2 44 14-58 17-62 (262)
205 1qv9_A F420-dependent methylen 69.7 24 0.00082 25.6 7.2 83 40-133 31-122 (283)
206 3gyg_A NTD biosynthesis operon 69.7 11 0.00036 27.2 5.8 60 13-73 25-92 (289)
207 3ot5_A UDP-N-acetylglucosamine 67.6 6.1 0.00021 30.5 4.3 96 31-134 44-148 (403)
208 2c4n_A Protein NAGD; nucleotid 65.9 13 0.00046 25.4 5.5 51 14-65 7-61 (250)
209 3uma_A Hypothetical peroxiredo 62.8 24 0.00083 23.9 6.2 39 27-66 77-116 (184)
210 3heb_A Response regulator rece 62.4 26 0.0009 22.0 6.2 39 28-67 72-114 (152)
211 1tp9_A Peroxiredoxin, PRX D (t 58.5 35 0.0012 22.2 7.6 38 27-65 56-94 (162)
212 3sho_A Transcriptional regulat 57.8 15 0.00052 24.6 4.4 31 25-55 98-128 (187)
213 2xhz_A KDSD, YRBH, arabinose 5 57.7 14 0.00048 24.7 4.2 30 25-54 107-136 (183)
214 1x92_A APC5045, phosphoheptose 57.2 14 0.00048 25.1 4.2 32 24-55 123-154 (199)
215 1s2o_A SPP, sucrose-phosphatas 55.8 11 0.00038 26.6 3.6 46 28-76 22-67 (244)
216 3l12_A Putative glycerophospho 55.8 47 0.0016 24.5 7.1 52 31-99 258-309 (313)
217 3c8f_A Pyruvate formate-lyase 55.8 12 0.0004 26.1 3.7 30 23-52 79-109 (245)
218 2yx0_A Radical SAM enzyme; pre 55.0 17 0.00058 27.2 4.6 39 23-61 152-190 (342)
219 1tk9_A Phosphoheptose isomeras 54.5 13 0.00043 25.0 3.6 31 24-54 120-150 (188)
220 2xbl_A Phosphoheptose isomeras 53.5 15 0.00052 24.8 3.9 30 25-54 127-156 (198)
221 1m3s_A Hypothetical protein YC 52.2 19 0.00065 24.1 4.2 27 27-53 92-118 (186)
222 3ks6_A Glycerophosphoryl diest 52.2 57 0.0019 23.2 6.9 51 31-98 194-244 (250)
223 1tv8_A MOAA, molybdenum cofact 51.4 39 0.0013 25.1 6.1 52 1-52 50-107 (340)
224 3no3_A Glycerophosphodiester p 51.0 48 0.0017 23.4 6.3 50 32-98 187-236 (238)
225 2wfc_A Peroxiredoxin 5, PRDX5; 50.6 51 0.0017 21.7 6.2 39 27-66 52-91 (167)
226 3to5_A CHEY homolog; alpha(5)b 49.8 31 0.0011 22.1 4.7 38 31-69 73-114 (134)
227 3gl9_A Response regulator; bet 49.5 29 0.001 20.9 4.5 38 30-68 61-102 (122)
228 3qvq_A Phosphodiesterase OLEI0 49.3 68 0.0023 22.8 7.2 50 31-97 200-249 (252)
229 2yva_A DNAA initiator-associat 49.2 19 0.00067 24.3 3.9 30 24-53 119-148 (196)
230 1vim_A Hypothetical protein AF 49.0 16 0.00056 25.0 3.4 29 26-54 101-129 (200)
231 3tov_A Glycosyl transferase fa 48.7 82 0.0028 23.5 9.6 27 108-134 264-290 (349)
232 3hdg_A Uncharacterized protein 48.3 44 0.0015 20.3 5.9 24 30-53 66-91 (137)
233 2pwj_A Mitochondrial peroxired 48.2 56 0.0019 21.5 7.1 38 27-65 64-102 (171)
234 1qv9_A F420-dependent methylen 47.5 31 0.0011 25.0 4.6 50 16-66 66-115 (283)
235 3h1g_A Chemotaxis protein CHEY 47.2 34 0.0011 20.8 4.5 39 29-68 65-107 (129)
236 2lnd_A De novo designed protei 45.5 26 0.00088 20.7 3.3 33 21-53 31-63 (112)
237 3mng_A Peroxiredoxin-5, mitoch 45.2 65 0.0022 21.4 6.7 39 27-66 64-103 (173)
238 1jei_A Emerin; membrane protei 44.8 11 0.00038 20.4 1.5 32 31-62 9-40 (53)
239 2nn4_A Hypothetical protein YQ 44.6 8.1 0.00028 22.4 1.0 25 91-121 8-32 (72)
240 3lua_A Response regulator rece 43.9 47 0.0016 20.4 4.9 39 29-68 65-107 (140)
241 1tqj_A Ribulose-phosphate 3-ep 43.8 82 0.0028 22.1 7.0 100 26-133 97-203 (230)
242 1jeo_A MJ1247, hypothetical pr 43.7 23 0.0008 23.5 3.5 26 27-52 95-120 (180)
243 3kht_A Response regulator; PSI 43.1 43 0.0015 20.7 4.7 38 29-67 65-106 (144)
244 3t6k_A Response regulator rece 42.8 44 0.0015 20.5 4.6 25 30-54 63-91 (136)
245 4e2x_A TCAB9; kijanose, tetron 42.7 46 0.0016 25.4 5.5 47 27-76 305-352 (416)
246 2pz0_A Glycerophosphoryl diest 42.2 44 0.0015 23.8 4.9 40 31-76 201-240 (252)
247 3vmm_A Alanine-anticapsin liga 41.7 1E+02 0.0035 24.3 7.4 86 31-128 92-178 (474)
248 2i2w_A Phosphoheptose isomeras 39.8 18 0.00063 24.9 2.5 29 25-53 142-170 (212)
249 3kto_A Response regulator rece 39.5 62 0.0021 19.7 4.9 39 29-68 66-106 (136)
250 3trj_A Phosphoheptose isomeras 39.5 23 0.00078 24.4 3.0 30 24-53 124-153 (201)
251 1k68_A Phytochrome response re 39.5 41 0.0014 20.4 4.1 38 29-67 69-110 (140)
252 2zay_A Response regulator rece 39.3 47 0.0016 20.5 4.4 39 29-68 66-108 (147)
253 3eod_A Protein HNR; response r 38.8 58 0.002 19.5 4.7 24 31-54 67-92 (130)
254 1i3c_A Response regulator RCP1 38.8 56 0.0019 20.4 4.7 38 30-68 76-117 (149)
255 1sbo_A Putative anti-sigma fac 38.6 53 0.0018 19.4 4.4 37 31-70 66-102 (110)
256 1psw_A ADP-heptose LPS heptosy 38.5 1.1E+02 0.0039 22.2 10.0 29 105-134 262-290 (348)
257 3etn_A Putative phosphosugar i 38.3 40 0.0014 23.4 4.2 29 26-54 118-148 (220)
258 1tqx_A D-ribulose-5-phosphate 37.9 1E+02 0.0036 21.7 7.9 99 29-133 99-203 (227)
259 3ovp_A Ribulose-phosphate 3-ep 37.2 1.1E+02 0.0037 21.6 9.2 98 27-133 98-199 (228)
260 3l86_A Acetylglutamate kinase; 37.1 76 0.0026 23.2 5.6 42 26-69 51-92 (279)
261 3fxa_A SIS domain protein; str 36.5 21 0.00073 24.2 2.4 30 26-55 104-133 (201)
262 2pln_A HP1043, response regula 36.5 50 0.0017 20.1 4.1 24 30-53 73-98 (137)
263 1hyu_A AHPF, alkyl hydroperoxi 36.5 1.6E+02 0.0054 23.3 8.0 102 23-132 128-243 (521)
264 1dbw_A Transcriptional regulat 36.2 69 0.0024 19.1 4.7 38 30-68 62-101 (126)
265 3cnb_A DNA-binding response re 36.0 55 0.0019 20.0 4.2 24 30-53 69-96 (143)
266 3gt7_A Sensor protein; structu 35.8 73 0.0025 20.0 4.9 26 29-54 65-94 (154)
267 3dc7_A Putative uncharacterize 35.6 16 0.00055 25.2 1.7 23 92-116 11-33 (232)
268 2fiq_A Putative tagatose 6-pho 35.4 1.6E+02 0.0055 23.1 7.9 44 89-134 66-127 (420)
269 3snk_A Response regulator CHEY 34.7 31 0.0011 21.1 2.9 38 31-69 75-114 (135)
270 4hyl_A Stage II sporulation pr 34.6 66 0.0023 19.4 4.4 37 31-70 64-100 (117)
271 3jx9_A Putative phosphoheptose 33.7 33 0.0011 23.2 2.9 28 24-51 87-115 (170)
272 4f82_A Thioredoxin reductase; 33.7 80 0.0027 21.3 4.9 39 27-66 68-107 (176)
273 1nri_A Hypothetical protein HI 33.6 36 0.0012 25.2 3.4 31 25-55 151-181 (306)
274 1jbe_A Chemotaxis protein CHEY 33.4 68 0.0023 19.1 4.3 23 31-53 65-91 (128)
275 3f6p_A Transcriptional regulat 33.2 77 0.0026 18.8 4.5 23 31-53 62-85 (120)
276 3nhm_A Response regulator; pro 33.0 48 0.0016 20.0 3.5 25 29-53 61-89 (133)
277 3jvd_A Transcriptional regulat 33.0 1.4E+02 0.0048 21.7 7.4 25 27-51 159-184 (333)
278 3utn_X Thiosulfate sulfurtrans 33.0 50 0.0017 24.8 4.1 51 82-134 92-148 (327)
279 3hdv_A Response regulator; PSI 32.7 65 0.0022 19.5 4.2 26 29-54 66-94 (136)
280 3cg0_A Response regulator rece 32.5 61 0.0021 19.7 4.0 25 30-54 70-95 (140)
281 1th8_B Anti-sigma F factor ant 32.4 81 0.0028 18.8 4.6 37 30-69 64-100 (116)
282 8abp_A L-arabinose-binding pro 32.4 1.3E+02 0.0045 21.2 6.5 20 29-48 70-89 (306)
283 3eua_A Putative fructose-amino 32.2 53 0.0018 24.5 4.2 30 26-55 86-115 (329)
284 1k66_A Phytochrome response re 32.2 49 0.0017 20.3 3.5 24 30-53 77-104 (149)
285 4e7p_A Response regulator; DNA 32.1 74 0.0025 19.8 4.4 26 29-54 80-107 (150)
286 3gkn_A Bacterioferritin comigr 31.9 88 0.003 19.8 4.9 38 27-65 55-92 (163)
287 3b2n_A Uncharacterized protein 31.7 79 0.0027 19.1 4.4 37 30-67 64-102 (133)
288 4dad_A Putative pilus assembly 31.6 69 0.0024 19.7 4.2 41 28-69 80-122 (146)
289 1srr_A SPO0F, sporulation resp 31.0 83 0.0028 18.6 4.4 23 31-53 63-87 (124)
290 2zj3_A Glucosamine--fructose-6 30.8 56 0.0019 24.9 4.1 30 26-55 119-148 (375)
291 3rfa_A Ribosomal RNA large sub 30.7 1.8E+02 0.0062 22.5 7.0 33 23-55 180-219 (404)
292 1dmg_A Ribosomal protein L4; a 30.6 1.4E+02 0.0049 21.1 6.0 51 80-132 127-183 (225)
293 2r25_B Osmosensing histidine p 30.4 93 0.0032 18.8 4.8 37 31-68 68-107 (133)
294 2poc_A D-fructose-6- PH, isome 30.1 58 0.002 24.6 4.1 31 25-55 108-138 (367)
295 3eul_A Possible nitrate/nitrit 30.0 84 0.0029 19.5 4.4 38 29-67 75-114 (152)
296 3f6c_A Positive transcription 29.9 75 0.0026 19.1 4.1 40 28-68 59-100 (134)
297 3ghf_A Septum site-determining 29.9 1.1E+02 0.0036 19.3 5.2 38 28-66 61-98 (120)
298 2qzj_A Two-component response 29.6 94 0.0032 18.9 4.6 23 31-53 64-87 (136)
299 3fj1_A Putative phosphosugar i 29.5 58 0.002 24.4 4.0 29 27-55 104-132 (344)
300 3cz5_A Two-component response 29.2 75 0.0026 19.8 4.1 38 29-67 65-104 (153)
301 2qxy_A Response regulator; reg 29.2 73 0.0025 19.4 4.0 23 31-53 63-87 (142)
302 3mm4_A Histidine kinase homolo 29.1 91 0.0031 20.9 4.7 41 28-69 132-179 (206)
303 2pfu_A Biopolymer transport EX 29.1 31 0.0011 20.5 2.0 27 24-50 67-94 (99)
304 3jte_A Response regulator rece 28.9 68 0.0023 19.6 3.8 26 29-54 63-90 (143)
305 3hzh_A Chemotaxis response reg 28.4 78 0.0027 19.9 4.1 38 29-67 97-136 (157)
306 2qvg_A Two component response 28.4 72 0.0024 19.5 3.8 21 31-51 75-99 (143)
307 1j5x_A Glucosamine-6-phosphate 28.3 54 0.0019 24.5 3.6 31 25-55 111-141 (342)
308 3crn_A Response regulator rece 28.1 98 0.0033 18.6 4.4 23 31-53 63-87 (132)
309 3cvj_A Putative phosphoheptose 27.9 37 0.0013 23.9 2.5 28 25-52 119-146 (243)
310 2jba_A Phosphate regulon trans 27.9 50 0.0017 19.7 2.9 24 30-53 61-88 (127)
311 2a3n_A Putative glucosamine-fr 27.8 64 0.0022 24.2 4.0 30 25-54 113-142 (355)
312 3o65_A Putative ataxin-3-like 27.7 25 0.00086 24.4 1.5 44 18-61 135-180 (191)
313 1mb3_A Cell division response 27.4 67 0.0023 18.9 3.5 22 31-52 61-86 (124)
314 1tzb_A Glucose-6-phosphate iso 27.2 62 0.0021 23.7 3.7 26 26-51 91-116 (302)
315 2ioj_A Hypothetical protein AF 27.2 76 0.0026 20.2 3.8 32 105-136 53-86 (139)
316 2gt1_A Lipopolysaccharide hept 27.1 1.8E+02 0.0061 21.0 7.9 29 105-134 254-282 (326)
317 3txv_A Probable tagatose 6-pho 27.0 2.3E+02 0.008 22.4 8.9 103 29-136 7-136 (450)
318 1zcc_A Glycerophosphodiester p 26.9 1.7E+02 0.0057 20.6 6.4 41 31-76 184-224 (248)
319 3ilh_A Two component response 26.8 94 0.0032 18.9 4.2 24 30-53 75-104 (146)
320 2qr3_A Two-component system re 26.5 97 0.0033 18.7 4.2 24 30-53 67-92 (140)
321 3ctl_A D-allulose-6-phosphate 26.4 1.7E+02 0.0058 20.6 8.5 99 27-134 92-199 (231)
322 1tmy_A CHEY protein, TMY; chem 26.3 1E+02 0.0035 18.0 5.0 25 30-54 62-88 (120)
323 2pl1_A Transcriptional regulat 26.2 1E+02 0.0035 17.9 4.7 24 30-53 59-84 (121)
324 3qk7_A Transcriptional regulat 26.1 1.7E+02 0.0059 20.6 7.1 25 27-51 111-136 (294)
325 3cfy_A Putative LUXO repressor 26.0 1.1E+02 0.0039 18.5 4.5 38 30-68 63-102 (137)
326 1h4x_A SPOIIAA, anti-sigma F f 25.8 91 0.0031 18.7 3.9 36 31-69 64-99 (117)
327 1p6q_A CHEY2; chemotaxis, sign 25.8 69 0.0024 19.1 3.3 19 29-47 39-57 (129)
328 3ixr_A Bacterioferritin comigr 25.8 85 0.0029 20.6 4.0 38 27-65 71-108 (179)
329 3rqi_A Response regulator prot 25.6 1E+02 0.0035 20.1 4.4 39 30-69 66-106 (184)
330 3fkj_A Putative phosphosugar i 25.6 54 0.0019 24.7 3.2 30 26-55 101-130 (347)
331 2o55_A Putative glycerophospho 25.5 1.8E+02 0.0061 20.5 6.4 40 31-76 202-245 (258)
332 3g68_A Putative phosphosugar i 25.4 61 0.0021 24.4 3.5 28 27-54 95-122 (352)
333 1v4v_A UDP-N-acetylglucosamine 25.3 1.7E+02 0.0059 21.3 6.0 32 103-134 91-125 (376)
334 3j21_Z 50S ribosomal protein L 25.2 1.2E+02 0.0039 18.2 5.4 37 24-60 14-50 (99)
335 3t6o_A Sulfate transporter/ant 25.1 1.2E+02 0.0041 18.4 4.4 35 33-70 72-107 (121)
336 2ka5_A Putative anti-sigma fac 24.9 77 0.0026 19.6 3.4 36 31-69 74-109 (125)
337 3huu_A Transcription regulator 24.8 1.9E+02 0.0064 20.5 6.3 25 27-51 129-154 (305)
338 1xhk_A Putative protease LA ho 24.7 38 0.0013 23.2 2.0 55 105-159 117-185 (187)
339 3nwy_A Uridylate kinase; allos 24.4 60 0.0021 23.8 3.1 23 28-50 75-97 (281)
340 1ofu_X SULA, hypothetical prot 24.4 86 0.0029 19.7 3.5 41 91-133 46-91 (119)
341 3knz_A Putative sugar binding 24.2 64 0.0022 24.5 3.4 30 25-54 108-137 (366)
342 3rsc_A CALG2; TDP, enediyne, s 24.0 2.2E+02 0.0076 21.1 7.4 21 31-51 38-58 (415)
343 3hba_A Putative phosphosugar i 24.0 71 0.0024 23.9 3.6 28 27-54 103-130 (334)
344 3ffs_A Inosine-5-monophosphate 23.9 2.5E+02 0.0086 21.7 10.6 47 85-133 229-277 (400)
345 3g85_A Transcriptional regulat 23.9 1.9E+02 0.0064 20.2 8.0 25 27-51 112-137 (289)
346 4dgh_A Sulfate permease family 23.9 73 0.0025 19.8 3.2 36 31-69 71-106 (130)
347 1nm3_A Protein HI0572; hybrid, 23.9 1.4E+02 0.0049 20.5 5.0 29 27-55 54-83 (241)
348 3vnd_A TSA, tryptophan synthas 23.8 2.1E+02 0.0072 20.7 7.4 103 23-133 130-237 (267)
349 1xhf_A DYE resistance, aerobic 23.8 1.2E+02 0.004 17.8 4.5 23 31-53 63-86 (123)
350 3ia7_A CALG4; glycosysltransfe 23.7 2.2E+02 0.0075 20.9 6.8 22 30-51 21-42 (402)
351 1uj8_A ORF3, hypothetical prot 23.6 32 0.0011 20.0 1.2 24 142-165 32-55 (77)
352 3dnf_A ISPH, LYTB, 4-hydroxy-3 23.5 1.5E+02 0.0052 22.0 5.1 40 89-134 225-264 (297)
353 1dz3_A Stage 0 sporulation pro 23.4 1.1E+02 0.0038 18.2 4.0 24 30-53 63-89 (130)
354 3lp8_A Phosphoribosylamine-gly 23.3 1.7E+02 0.0059 22.6 5.8 92 28-129 70-163 (442)
355 3ff4_A Uncharacterized protein 23.3 67 0.0023 20.2 2.8 29 25-53 66-94 (122)
356 2l82_A Designed protein OR32; 23.3 1.3E+02 0.0046 18.8 4.1 20 31-50 93-112 (162)
357 1mvo_A PHOP response regulator 23.2 1E+02 0.0034 18.5 3.8 22 31-52 63-86 (136)
358 1qkk_A DCTD, C4-dicarboxylate 23.2 99 0.0034 19.2 3.8 38 29-67 61-100 (155)
359 2xhf_A Peroxiredoxin 5; oxidor 23.2 1.4E+02 0.0048 19.9 4.6 41 25-66 60-101 (171)
360 1smk_A Malate dehydrogenase, g 23.0 2.1E+02 0.0073 21.1 6.0 75 28-113 103-184 (326)
361 2qsj_A DNA-binding response re 22.8 94 0.0032 19.3 3.6 20 32-51 67-88 (154)
362 3hv2_A Response regulator/HD d 22.8 89 0.0031 19.4 3.5 24 30-53 73-98 (153)
363 1j5w_A Glycyl-tRNA synthetase 22.7 17 0.00057 26.7 -0.2 39 88-126 101-140 (298)
364 3m6m_D Sensory/regulatory prot 22.5 1.4E+02 0.0049 18.3 4.8 24 30-53 73-102 (143)
365 1moq_A Glucosamine 6-phosphate 22.3 76 0.0026 23.9 3.5 30 26-55 111-141 (368)
366 3ek6_A Uridylate kinase; UMPK 22.2 78 0.0027 22.5 3.3 24 27-50 34-57 (243)
367 3v7e_A Ribosome-associated pro 22.0 1E+02 0.0034 17.8 3.3 38 22-59 8-45 (82)
368 4a7w_A Uridylate kinase; trans 21.8 82 0.0028 22.3 3.4 23 28-50 33-55 (240)
369 2yxb_A Coenzyme B12-dependent 21.4 1.8E+02 0.0061 19.0 6.0 91 29-130 34-127 (161)
370 1xx1_A Smase I, sphingomyelina 21.4 1.5E+02 0.0053 21.1 4.9 51 32-99 213-265 (285)
371 3qbe_A 3-dehydroquinate syntha 21.3 2.7E+02 0.0094 21.1 6.5 98 28-132 30-137 (368)
372 1zgz_A Torcad operon transcrip 21.3 1.3E+02 0.0045 17.5 4.2 22 31-52 62-84 (122)
373 3pnx_A Putative sulfurtransfer 21.3 64 0.0022 21.5 2.5 25 27-51 101-125 (160)
374 3s6g_A N-acetylglutamate kinas 21.2 2.9E+02 0.0097 21.8 6.6 82 28-133 75-157 (460)
375 1ujn_A Dehydroquinate synthase 21.2 2.6E+02 0.009 20.9 7.3 82 41-132 28-118 (348)
376 1hye_A L-lactate/malate dehydr 21.0 2E+02 0.0069 21.0 5.5 75 28-113 101-178 (313)
377 3k9c_A Transcriptional regulat 20.9 2.2E+02 0.0076 19.9 7.8 25 27-51 111-136 (289)
378 1vd6_A Glycerophosphoryl diest 20.8 1.3E+02 0.0045 20.7 4.3 33 31-65 176-208 (224)
379 3egc_A Putative ribose operon 20.8 2.2E+02 0.0075 19.8 6.0 25 27-51 110-135 (291)
380 2j07_A Deoxyribodipyrimidine p 20.6 1.2E+02 0.004 23.5 4.3 39 26-65 50-88 (420)
381 3zzh_A Acetylglutamate kinase; 20.6 2.6E+02 0.009 20.6 7.0 83 27-133 64-147 (307)
382 2v5h_A Acetylglutamate kinase; 20.5 1.7E+02 0.0059 21.7 5.0 39 28-68 68-106 (321)
383 2oog_A Glycerophosphoryl diest 20.5 1.9E+02 0.0064 20.8 5.2 40 31-76 231-270 (287)
384 3w01_A Heptaprenylglyceryl pho 20.4 2.4E+02 0.0082 20.1 5.9 70 26-109 49-120 (235)
385 3kke_A LACI family transcripti 20.2 2.4E+02 0.008 19.9 8.1 25 27-51 116-141 (303)
386 1ybd_A Uridylate kinase; alpha 20.2 84 0.0029 22.0 3.1 24 27-50 32-55 (239)
387 3mz2_A Glycerophosphoryl diest 20.0 2.6E+02 0.0088 20.3 7.8 57 27-99 214-279 (292)
No 1
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=99.93 E-value=1.6e-24 Score=159.63 Aligned_cols=142 Identities=61% Similarity=0.997 Sum_probs=125.6
Q ss_pred hhcCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcC
Q psy6288 20 LLLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFD 99 (166)
Q Consensus 20 ~~~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~ 99 (166)
......++||+.++|+.|++.|++++|+||+....+...+.+.+|+..+|+.+++++ +......||++.+|+.++++++
T Consensus 107 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~-~~~~~~~Kp~~~~~~~~~~~lg 185 (250)
T 3l5k_A 107 VFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGD-DPEVQHGKPDPDIFLACAKRFS 185 (250)
T ss_dssp HGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTT-CTTCCSCTTSTHHHHHHHHTSS
T ss_pred HhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecc-hhhccCCCCChHHHHHHHHHcC
Confidence 334578999999999999999999999999997777666656568999999998876 1136779999999999999999
Q ss_pred CCCCC--CceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhhhhhcCCCCCC
Q psy6288 100 EKPQP--SKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPELYGLPPFE 164 (166)
Q Consensus 100 ~~~~~--~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 164 (166)
+++ ++|++|||+.+|+.+|+++|+.+++|.++....+....++++++++.++.+.|.++++|.
T Consensus 186 --i~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~l~~l~~~~ 250 (250)
T 3l5k_A 186 --PPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE 250 (250)
T ss_dssp --SCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGGGGTCCCCC
T ss_pred --CCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHHHhcCCCCC
Confidence 887 999999999999999999999999999997666667789999999999999999999983
No 2
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=99.93 E-value=5.6e-25 Score=162.38 Aligned_cols=126 Identities=22% Similarity=0.340 Sum_probs=109.4
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCC
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQ 103 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 103 (166)
..++||+.++++.|+++|++++++||+... ..+++++|+..+||.+++++ ++..+||+|++|+.+++++| ++
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~~---~~~l~~~gl~~~fd~i~~~~---~~~~~KP~p~~~~~a~~~lg--~~ 165 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLNA---PTILAALELREFFTFCADAS---QLKNSKPDPEIFLAACAGLG--VP 165 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTTH---HHHHHHTTCGGGCSEECCGG---GCSSCTTSTHHHHHHHHHHT--SC
T ss_pred ccccccHHHHHHhhhcccccceecccccch---hhhhhhhhhccccccccccc---cccCCCCcHHHHHHHHHHcC--CC
Confidence 468999999999999999999999998643 23345679999999999999 89999999999999999999 99
Q ss_pred CCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcc--cccccchhhCChhhhhhhh
Q psy6288 104 PSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH--RTEAADLVLNSLEEFKPEL 157 (166)
Q Consensus 104 ~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~--~~~~~~~~~~~~~~l~~~l 157 (166)
|++|+||||+.+|+.+|+++|+.+|+|.+|....+ ....++.+++++.++.+.+
T Consensus 166 p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~~ad~~~~~~~~l~~~~l~~~~~~l 221 (243)
T 4g9b_A 166 PQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV 221 (243)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEESTTCCSCSEEESSGGGCCHHHHHHHHHHH
T ss_pred hHHEEEEcCCHHHHHHHHHcCCEEEEECCCCCcHHHhcCChhhcCHHHHHHHHHHH
Confidence 99999999999999999999999999999976554 3345677777877775544
No 3
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=99.92 E-value=2.2e-24 Score=155.65 Aligned_cols=130 Identities=30% Similarity=0.426 Sum_probs=109.8
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
...++||+.++++.|++.|++++++||++...+...+ +.+|+.++||.+++++ +++..||+|.+|+.+++++| +
T Consensus 82 ~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l-~~~~l~~~fd~~~~~~---~~~~~KP~p~~~~~a~~~lg--~ 155 (216)
T 3kbb_A 82 LLKENPGVREALEFVKSKRIKLALATSTPQREALERL-RRLDLEKYFDVMVFGD---QVKNGKPDPEIYLLVLERLN--V 155 (216)
T ss_dssp HCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECGG---GSSSCTTSTHHHHHHHHHHT--C
T ss_pred hcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHH-HhcCCCcccccccccc---ccCCCcccHHHHHHHHHhhC--C
Confidence 4678999999999999999999999999988776555 4579999999999999 89999999999999999999 9
Q ss_pred CCCceEEEecCHhHHHHHHHcCCeEEE-ecCCCCCcc-cccccchhhCChhhhhhhhc
Q psy6288 103 QPSKCLVFEDAPNGVLGAKAAGMSCVM-VPDPTVPKH-RTEAADLVLNSLEEFKPELY 158 (166)
Q Consensus 103 ~~~~~i~IGD~~~Di~~a~~~G~~~i~-v~~~~~~~~-~~~~~~~~~~~~~~l~~~l~ 158 (166)
+|++|+||||+.+|+.+|+++|+++|+ +.++....+ ........+.+..++.+.|.
T Consensus 156 ~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~~~eli~~l~ 213 (216)
T 3kbb_A 156 VPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEILNVLK 213 (216)
T ss_dssp CGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEECGGGHHHHHH
T ss_pred CccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECCHHHHHHHHH
Confidence 999999999999999999999999984 888865554 22333334446666666554
No 4
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=99.92 E-value=4e-24 Score=152.39 Aligned_cols=131 Identities=16% Similarity=0.256 Sum_probs=113.5
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCch---hhHHHHHhhhcCcccccceEEecCCCCCc----cCCCCChHHHHHH
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAK---ESFELKTSRHKDTLKLFHHVVLGSADPEV----KQGKPAPDVFLVA 94 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~---~~~~~~l~~~~gl~~~fd~v~~~~~~~~~----~~~Kp~~~~~~~~ 94 (166)
....++||+.++|+.|++.|++++|+||++. ..+...+ +.+|+..+|+.+++++ +. ...||+|.+|+.+
T Consensus 31 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l-~~~gl~~~fd~i~~~~---~~~~~~~~~KP~p~~~~~~ 106 (189)
T 3ib6_A 31 PEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVL-TNFGIIDYFDFIYASN---SELQPGKMEKPDKTIFDFT 106 (189)
T ss_dssp TTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHH-HHTTCGGGEEEEEECC---TTSSTTCCCTTSHHHHHHH
T ss_pred CCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHH-HhcCchhheEEEEEcc---ccccccCCCCcCHHHHHHH
Confidence 4578999999999999999999999999986 5554444 5579999999999998 65 7889999999999
Q ss_pred HHHcCCCCCCCceEEEecC-HhHHHHHHHcCCeEEEecCCCCCc--c--cccccchhhC--Chhhhhhhhc
Q psy6288 95 AKRFDEKPQPSKCLVFEDA-PNGVLGAKAAGMSCVMVPDPTVPK--H--RTEAADLVLN--SLEEFKPELY 158 (166)
Q Consensus 95 ~~~~~~~~~~~~~i~IGD~-~~Di~~a~~~G~~~i~v~~~~~~~--~--~~~~~~~~~~--~~~~l~~~l~ 158 (166)
+++++ +++++|+||||+ .+|+.+|+++|+.++++.++.... + ....++++++ ++.++.++|.
T Consensus 107 ~~~~~--~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~ 175 (189)
T 3ib6_A 107 LNALQ--IDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALL 175 (189)
T ss_dssp HHHHT--CCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHH
T ss_pred HHHcC--CCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHH
Confidence 99999 999999999999 699999999999999999886532 2 2238899999 9999988764
No 5
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=99.91 E-value=2e-23 Score=151.41 Aligned_cols=135 Identities=25% Similarity=0.279 Sum_probs=119.6
Q ss_pred hhcCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcC
Q psy6288 20 LLLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFD 99 (166)
Q Consensus 20 ~~~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~ 99 (166)
......++||+.++|+.|++.|++++++||+....+...+ +.+|+..+|+.+++++ .....||++..|+.++++++
T Consensus 86 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~l~ 161 (233)
T 3s6j_A 86 LQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINL-KALKLDINKINIVTRD---DVSYGKPDPDLFLAAAKKIG 161 (233)
T ss_dssp TGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHH-HTTTCCTTSSCEECGG---GSSCCTTSTHHHHHHHHHTT
T ss_pred hhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHH-Hhcchhhhhheeeccc---cCCCCCCChHHHHHHHHHhC
Confidence 3345789999999999999999999999999977775555 5579999999999999 88999999999999999999
Q ss_pred CCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcc--cccccchhhCChhhhhhhhcCC
Q psy6288 100 EKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH--RTEAADLVLNSLEEFKPELYGL 160 (166)
Q Consensus 100 ~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~ 160 (166)
+++++|++|||+.+|+.+|+++|+.+++|.++..... ....++++++++.++.++|.+.
T Consensus 162 --~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l~~~ 222 (233)
T 3s6j_A 162 --APIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDEI 222 (233)
T ss_dssp --CCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTGGGT
T ss_pred --CCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHHHHH
Confidence 9999999999999999999999999999998855444 2335899999999999998765
No 6
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=99.91 E-value=1.5e-23 Score=151.26 Aligned_cols=126 Identities=15% Similarity=0.195 Sum_probs=109.9
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
...++||+.++|+.|++ |++++|+||+....+...+ +.+|+..+|+.+++++ ...||+|..|+.+++++| +
T Consensus 82 ~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l-~~~gl~~~f~~i~~~~-----~~~Kp~p~~~~~~~~~lg--~ 152 (210)
T 2ah5_A 82 EAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMA-KNLEIHHFFDGIYGSS-----PEAPHKADVIHQALQTHQ--L 152 (210)
T ss_dssp SCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEEC-----SSCCSHHHHHHHHHHHTT--C
T ss_pred CCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHH-HhcCchhheeeeecCC-----CCCCCChHHHHHHHHHcC--C
Confidence 46789999999999999 9999999999987775555 4579999999988765 467999999999999999 9
Q ss_pred CCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcc-c-ccccchhhCChhhhhhhh
Q psy6288 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH-R-TEAADLVLNSLEEFKPEL 157 (166)
Q Consensus 103 ~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~-~-~~~~~~~~~~~~~l~~~l 157 (166)
+|++|++|||+.+|+.+|+++|+.++++.++....+ . ...++++++++.++.++|
T Consensus 153 ~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~l 209 (210)
T 2ah5_A 153 APEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYF 209 (210)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHHT
T ss_pred CcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHHh
Confidence 999999999999999999999999999999865333 2 246899999999998754
No 7
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=99.91 E-value=3e-24 Score=151.29 Aligned_cols=129 Identities=16% Similarity=0.206 Sum_probs=107.7
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCch---------------hhHHHHHhhhcCcccccceEEe-----cCCCCCcc
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAK---------------ESFELKTSRHKDTLKLFHHVVL-----GSADPEVK 82 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~---------------~~~~~~l~~~~gl~~~fd~v~~-----~~~~~~~~ 82 (166)
...++||+.++|+.|+++|++++|+||++. ..+...+ +.+| .+|+.++. ++ ...
T Consensus 25 ~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g--~~~~~~~~~~~~~~~---~~~ 98 (179)
T 3l8h_A 25 EWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRAL-AQMG--GVVDAIFMCPHGPDD---GCA 98 (179)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHH-HHTT--CCCCEEEEECCCTTS---CCS
T ss_pred HceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHH-HhCC--CceeEEEEcCCCCCC---CCC
Confidence 457999999999999999999999999985 3333333 3356 44555553 35 678
Q ss_pred CCCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCccc----ccccchhhCChhhhhhhhc
Q psy6288 83 QGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHR----TEAADLVLNSLEEFKPELY 158 (166)
Q Consensus 83 ~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~----~~~~~~~~~~~~~l~~~l~ 158 (166)
..||+|.+|+.++++++ +++++|+||||+.+|+.+|+++|+.+++|.+|...... ...++++++++.++.++|+
T Consensus 99 ~~KP~~~~~~~~~~~~~--~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 99 CRKPLPGMYRDIARRYD--VDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp SSTTSSHHHHHHHHHHT--CCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcC--CCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 89999999999999999 99999999999999999999999999999999755442 3678999999999999886
Q ss_pred C
Q psy6288 159 G 159 (166)
Q Consensus 159 ~ 159 (166)
+
T Consensus 177 ~ 177 (179)
T 3l8h_A 177 Q 177 (179)
T ss_dssp H
T ss_pred h
Confidence 4
No 8
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=99.91 E-value=1.5e-23 Score=155.26 Aligned_cols=124 Identities=24% Similarity=0.381 Sum_probs=106.8
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++||+.++++.|++.|+++++.|+... .... ++.+|+.++||.+++++ ++...||+|++|..+++++|
T Consensus 113 ~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~-L~~~gl~~~Fd~i~~~~---~~~~~KP~p~~~~~a~~~lg-- 184 (250)
T 4gib_A 113 TSNDILPGIESLLIDVKSNNIKIGLSSASKN--AINV-LNHLGISDKFDFIADAG---KCKNNKPHPEIFLMSAKGLN-- 184 (250)
T ss_dssp CGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHH-HHHHTCGGGCSEECCGG---GCCSCTTSSHHHHHHHHHHT--
T ss_pred cccccchhHHHHHHHHHhcccccccccccch--hhhH-hhhcccccccceeeccc---ccCCCCCcHHHHHHHHHHhC--
Confidence 3456899999999999999999999887653 3334 45579999999999999 89999999999999999999
Q ss_pred CCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhh-hhh
Q psy6288 102 PQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFK-PEL 157 (166)
Q Consensus 102 ~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~-~~l 157 (166)
++|++|+||||+.+|+.+|+++|+.+|+|.+.. ....++++++++.||. +.|
T Consensus 185 ~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~----~~~~ad~vi~~l~eL~~~~i 237 (250)
T 4gib_A 185 VNPQNCIGIEDASAGIDAINSANMFSVGVGNYE----NLKKANLVVDSTNQLKFEYI 237 (250)
T ss_dssp CCGGGEEEEESSHHHHHHHHHTTCEEEEESCTT----TTTTSSEEESSGGGCCHHHH
T ss_pred CChHHeEEECCCHHHHHHHHHcCCEEEEECChh----HhccCCEEECChHhCCHHHH
Confidence 999999999999999999999999999996542 2346899999999984 444
No 9
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=99.91 E-value=2.1e-23 Score=150.96 Aligned_cols=135 Identities=17% Similarity=0.177 Sum_probs=120.1
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++||+.++|+.|++.|++++++||+....+...+ +.+|+..+|+.+++++ .....||++..++.+++++|
T Consensus 83 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~lg-- 156 (226)
T 3mc1_A 83 FENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQIL-EHFKLAFYFDAIVGSS---LDGKLSTKEDVIRYAMESLN-- 156 (226)
T ss_dssp GSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEEC---TTSSSCSHHHHHHHHHHHHT--
T ss_pred ccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhCCHhheeeeeccC---CCCCCCCCHHHHHHHHHHhC--
Confidence 34689999999999999999999999999877775555 5579999999999999 88999999999999999999
Q ss_pred CCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCccc--ccccchhhCChhhhhhhhcCCCC
Q psy6288 102 PQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHR--TEAADLVLNSLEEFKPELYGLPP 162 (166)
Q Consensus 102 ~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~ 162 (166)
+++++|++|||+.+|+.+|+++|+.+++|.++...... ...++++++++.++.+++.+.++
T Consensus 157 i~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~~~~~~ 219 (226)
T 3mc1_A 157 IKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKILELRE 219 (226)
T ss_dssp CCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHHHTC--
T ss_pred cCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999998755543 47889999999999999886653
No 10
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=99.91 E-value=3.2e-23 Score=152.22 Aligned_cols=131 Identities=17% Similarity=0.236 Sum_probs=114.5
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++||+.++|+.|+++|++++|+||++...+...+ +.+|+. +|+.+++++ ....+||+|.+|..+++++|
T Consensus 107 ~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~-~f~~~~~~~---~~~~~Kp~p~~~~~~~~~l~-- 179 (240)
T 2hi0_A 107 IKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLV-EELFPG-SFDFALGEK---SGIRRKPAPDMTSECVKVLG-- 179 (240)
T ss_dssp SSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHSTT-TCSEEEEEC---TTSCCTTSSHHHHHHHHHHT--
T ss_pred hcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCc-ceeEEEecC---CCCCCCCCHHHHHHHHHHcC--
Confidence 34678999999999999999999999999877665555 446888 999999998 88899999999999999999
Q ss_pred CCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcc-c-ccccchhhCChhhhhhhhcC
Q psy6288 102 PQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH-R-TEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 102 ~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~-~-~~~~~~~~~~~~~l~~~l~~ 159 (166)
++|++|++|||+.+|+.+|+++|+.+++|.++..... . ...++++++++.++..+|.+
T Consensus 180 ~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el~~~l~~ 239 (240)
T 2hi0_A 180 VPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEEAILG 239 (240)
T ss_dssp CCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHHHHHHHT
T ss_pred CCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHHHHHhcc
Confidence 9999999999999999999999999999998864433 2 24689999999999887643
No 11
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=99.91 E-value=3.2e-23 Score=150.58 Aligned_cols=134 Identities=15% Similarity=0.213 Sum_probs=119.6
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++||+.++|+.|++.|++++++||+....+...+ +.+|+..+|+.+++++ .....||++.+|+.++++++
T Consensus 96 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~~~-- 169 (233)
T 3umb_A 96 ACLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAV-KSAGMSGLFDHVLSVD---AVRLYKTAPAAYALAPRAFG-- 169 (233)
T ss_dssp HSCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHH-HTTTCTTTCSEEEEGG---GTTCCTTSHHHHTHHHHHHT--
T ss_pred hcCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHH-HHCCcHhhcCEEEEec---ccCCCCcCHHHHHHHHHHhC--
Confidence 35788999999999999999999999999987775555 5579999999999999 89999999999999999999
Q ss_pred CCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcc-cccccchhhCChhhhhhhhcCCC
Q psy6288 102 PQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH-RTEAADLVLNSLEEFKPELYGLP 161 (166)
Q Consensus 102 ~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~ 161 (166)
+++++|++|||+.+|+.+|+++|+.++++.++....+ ....++++++++.++.++|.+..
T Consensus 170 ~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l~~~~ 230 (233)
T 3umb_A 170 VPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFVQARQ 230 (233)
T ss_dssp SCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHHHC--
T ss_pred CCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999865544 45678999999999999987654
No 12
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=99.90 E-value=3.3e-23 Score=151.06 Aligned_cols=132 Identities=22% Similarity=0.256 Sum_probs=118.1
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++||+.++|+.|++.|++++++||+....+...+ +.+|+..+|+.+++++ .....||++..|+.++++++
T Consensus 101 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~lg-- 174 (237)
T 4ex6_A 101 GPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIA-ELTGLDTRLTVIAGDD---SVERGKPHPDMALHVARGLG-- 174 (237)
T ss_dssp GGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHH-HHHTGGGTCSEEECTT---TSSSCTTSSHHHHHHHHHHT--
T ss_pred cCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHH-HHcCchhheeeEEeCC---CCCCCCCCHHHHHHHHHHcC--
Confidence 45678999999999999999999999999987775555 5569999999999999 89999999999999999999
Q ss_pred CCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcc-c-ccccchhhCChhhhhhhhcC
Q psy6288 102 PQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH-R-TEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 102 ~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~-~-~~~~~~~~~~~~~l~~~l~~ 159 (166)
+++++|++|||+.+|+.+|+++|+.+++|.++....+ . ...++++++++.+|.++|..
T Consensus 175 ~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l~~ 234 (237)
T 4ex6_A 175 IPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAVLD 234 (237)
T ss_dssp CCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHHHH
T ss_pred CCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHHHc
Confidence 9999999999999999999999999999999965533 2 34789999999999998764
No 13
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=99.90 E-value=6.3e-23 Score=148.66 Aligned_cols=134 Identities=16% Similarity=0.170 Sum_probs=119.4
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++||+.++|+.|++.|++++++||+....+...+ +.+|+..+|+.+++++ .....||++..|+.++++++
T Consensus 93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~~~-- 166 (230)
T 3um9_A 93 LSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVV-GNSGLTNSFDHLISVD---EVRLFKPHQKVYELAMDTLH-- 166 (230)
T ss_dssp TSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHHTCGGGCSEEEEGG---GTTCCTTCHHHHHHHHHHHT--
T ss_pred hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHH-HHCCChhhcceeEehh---hcccCCCChHHHHHHHHHhC--
Confidence 45789999999999999999999999999987775555 4469999999999999 88999999999999999999
Q ss_pred CCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcc-cccccchhhCChhhhhhhhcCCC
Q psy6288 102 PQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH-RTEAADLVLNSLEEFKPELYGLP 161 (166)
Q Consensus 102 ~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~ 161 (166)
+++++|++|||+.+|+.+|+++|+.++++.++....+ ....++++++++.++.++|..+.
T Consensus 167 ~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (230)
T 3um9_A 167 LGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFSPVD 227 (230)
T ss_dssp CCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHTCCC--
T ss_pred CCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999865444 45688999999999999887653
No 14
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=99.90 E-value=8.7e-23 Score=148.37 Aligned_cols=131 Identities=15% Similarity=0.163 Sum_probs=116.9
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++||+.++|+.|++.|++++|+||+....+...+ +.+|+..+|+.+++++ +....||++..|+.++++++
T Consensus 80 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~gl~~~f~~i~~~~---~~~~~Kp~~~~~~~~~~~~~-- 153 (222)
T 2nyv_A 80 VYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKIL-DILNLSGYFDLIVGGD---TFGEKKPSPTPVLKTLEILG-- 153 (222)
T ss_dssp SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECTT---SSCTTCCTTHHHHHHHHHHT--
T ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCHHHheEEEecC---cCCCCCCChHHHHHHHHHhC--
Confidence 45789999999999999999999999999877665554 5579999999999998 88899999999999999999
Q ss_pred CCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhhhhhcC
Q psy6288 102 PQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 102 ~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 159 (166)
+++++|++|||+.+|+.+|+++|+.+++|.++...... ..++++++++.++.+++..
T Consensus 154 ~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l~~ 210 (222)
T 2nyv_A 154 EEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLMDN 210 (222)
T ss_dssp CCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHHHT
T ss_pred CCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999988644444 6789999999999988764
No 15
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=99.90 E-value=5.5e-23 Score=147.02 Aligned_cols=130 Identities=31% Similarity=0.443 Sum_probs=118.0
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCC
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQ 103 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 103 (166)
..++||+.++|+.|++.|++++++||+....+...+ +.+|+..+|+.+++++ .....||++..++.+++++| ++
T Consensus 83 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~~~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~~~--~~ 156 (216)
T 2pib_A 83 LKENPGVREALEFVKSKRIKLALATSTPQREALERL-RRLDLEKYFDVMVFGD---QVKNGKPDPEIYLLVLERLN--VV 156 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECGG---GSSSCTTSTHHHHHHHHHHT--CC
T ss_pred CCcCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHH-HhcChHHhcCEEeecc---cCCCCCcCcHHHHHHHHHcC--CC
Confidence 789999999999999999999999999987775555 5569999999999999 88999999999999999999 99
Q ss_pred CCceEEEecCHhHHHHHHHcCCeEE--EecCCCCCcccccccchhhCChhhhhhhhcC
Q psy6288 104 PSKCLVFEDAPNGVLGAKAAGMSCV--MVPDPTVPKHRTEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 104 ~~~~i~IGD~~~Di~~a~~~G~~~i--~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 159 (166)
+++|++|||+.+|+.+|+++|+.++ ++.++.........++++++++.++.++|.+
T Consensus 157 ~~~~i~iGD~~~Di~~a~~aG~~~i~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l~~ 214 (216)
T 2pib_A 157 PEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEILNVLKE 214 (216)
T ss_dssp GGGEEEEECSHHHHHHHHHTTCCEEEEECCSSSCCHHHHHTTCSEEECGGGHHHHHHH
T ss_pred CceEEEEeCcHHHHHHHHHcCCcEEehccCCCCCchhhcchhheeeCCHHHHHHHHHH
Confidence 9999999999999999999999999 9999876555336899999999999988754
No 16
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=99.90 E-value=1.3e-22 Score=148.60 Aligned_cols=133 Identities=18% Similarity=0.212 Sum_probs=117.0
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++||+.++|+.|+++|++++++||+....+...+ +.+|+..+|+.+++++ .....||++..|+.++++++
T Consensus 102 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~---~~~~~Kp~~~~~~~~~~~~~-- 175 (240)
T 2no4_A 102 KELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAAL-KASKLDRVLDSCLSAD---DLKIYKPDPRIYQFACDRLG-- 175 (240)
T ss_dssp HTCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGG---GTTCCTTSHHHHHHHHHHHT--
T ss_pred hcCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HhcCcHHHcCEEEEcc---ccCCCCCCHHHHHHHHHHcC--
Confidence 35688999999999999999999999999977665555 4579999999999999 88899999999999999999
Q ss_pred CCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCccccccc-chhhCChhhhhhhhcCC
Q psy6288 102 PQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAA-DLVLNSLEEFKPELYGL 160 (166)
Q Consensus 102 ~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~ 160 (166)
+++++|++|||+.+|+.+|+++|+.++++.++.........+ +++++++.++.++|..+
T Consensus 176 ~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 235 (240)
T 2no4_A 176 VNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELWPLLAKN 235 (240)
T ss_dssp CCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGHHHHHCC-
T ss_pred CCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHHHHHHHHh
Confidence 999999999999999999999999999999986532334567 89999999999887654
No 17
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=99.90 E-value=8.6e-23 Score=149.37 Aligned_cols=131 Identities=15% Similarity=0.123 Sum_probs=118.2
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++||+.++|+.|++.|++++++||+....+...+ +.+|+..+|+.+++++ .....||++..++.++++++
T Consensus 107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~~g-- 180 (240)
T 3sd7_A 107 FENKIYENMKEILEMLYKNGKILLVATSKPTVFAETIL-RYFDIDRYFKYIAGSN---LDGTRVNKNEVIQYVLDLCN-- 180 (240)
T ss_dssp GCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEEC---TTSCCCCHHHHHHHHHHHHT--
T ss_pred cccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH-HHcCcHhhEEEEEecc---ccCCCCCCHHHHHHHHHHcC--
Confidence 45789999999999999999999999999877775555 4569999999999999 88999999999999999999
Q ss_pred CC-CCceEEEecCHhHHHHHHHcCCeEEEecCCCCCccc--ccccchhhCChhhhhhhhc
Q psy6288 102 PQ-PSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHR--TEAADLVLNSLEEFKPELY 158 (166)
Q Consensus 102 ~~-~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~~~~l~~~l~ 158 (166)
++ +++|++|||+.+|+.+|+++|+.+++|.++...... ...++++++++.++.++|+
T Consensus 181 ~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~ll 240 (240)
T 3sd7_A 181 VKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDILL 240 (240)
T ss_dssp CCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHHC
T ss_pred CCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHhC
Confidence 99 999999999999999999999999999988765553 4788999999999998874
No 18
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=99.90 E-value=2e-22 Score=143.93 Aligned_cols=127 Identities=24% Similarity=0.385 Sum_probs=114.0
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCC
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQ 103 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 103 (166)
..++||+.++|+.|++.|++++++||+....+...+ +.+|+..+|+.+++++ .....||++..++.++++++ ++
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~~~--~~ 161 (214)
T 3e58_A 88 ELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRAL-EENRLQGFFDIVLSGE---EFKESKPNPEIYLTALKQLN--VQ 161 (214)
T ss_dssp HHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGG---GCSSCTTSSHHHHHHHHHHT--CC
T ss_pred CCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHH-HHcCcHhheeeEeecc---cccCCCCChHHHHHHHHHcC--CC
Confidence 368999999999999999999999999987776555 4579999999999999 88999999999999999999 99
Q ss_pred CCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhhhhh
Q psy6288 104 PSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPEL 157 (166)
Q Consensus 104 ~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~l 157 (166)
+++|++|||+.+|+.+|+++|+.++++.++...... ..++++++++.++.++|
T Consensus 162 ~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~-~~a~~~~~~~~el~~~i 214 (214)
T 3e58_A 162 ASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQ-SAAKGLLDSLTDVLDLI 214 (214)
T ss_dssp GGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCC-TTSSEEESSGGGGGGGC
T ss_pred hHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchh-ccHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999987443333 77899999999998764
No 19
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=99.90 E-value=6.8e-23 Score=150.29 Aligned_cols=130 Identities=24% Similarity=0.340 Sum_probs=116.0
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccccc--ceEEecCCCCCccCCCCChHHHHHHHHHcCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLF--HHVVLGSADPEVKQGKPAPDVFLVAAKRFDE 100 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~f--d~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 100 (166)
...++||+.++|+.|++.|++++++||+....+...+ +. |+..+| +.+++++ .....||++..|+.++++++
T Consensus 107 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~-~l~~~f~~d~i~~~~---~~~~~kp~~~~~~~~~~~lg- 180 (243)
T 3qxg_A 107 EAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERL-EH-NFPGMFHKELMVTAF---DVKYGKPNPEPYLMALKKGG- 180 (243)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTH-HH-HSTTTCCGGGEECTT---TCSSCTTSSHHHHHHHHHTT-
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHH-HH-hHHHhcCcceEEeHH---hCCCCCCChHHHHHHHHHcC-
Confidence 4688999999999999999999999999877665554 44 899999 8899999 88999999999999999999
Q ss_pred CCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcc--cccccchhhCChhhhhhhhcC
Q psy6288 101 KPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH--RTEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 101 ~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~ 159 (166)
+++++|++|||+.+|+.+|+++|+.++++.++..... ....++++++++.+|.+.|..
T Consensus 181 -~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l~~ 240 (243)
T 3qxg_A 181 -LKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSWDT 240 (243)
T ss_dssp -CCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHHHH
T ss_pred -CCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHHHh
Confidence 9999999999999999999999999999999865544 234789999999999988754
No 20
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=99.89 E-value=1.4e-22 Score=148.28 Aligned_cols=130 Identities=27% Similarity=0.417 Sum_probs=114.0
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccccc--ceEEecCCCCCccCCCCChHHHHHHHHHcCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLF--HHVVLGSADPEVKQGKPAPDVFLVAAKRFDE 100 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~f--d~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 100 (166)
...++||+.++|+.|++.|++++++||+....+...+ +. |+..+| +.+++++ .....||++.+|+.+++++|
T Consensus 106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~-~l~~~f~~~~~~~~~---~~~~~kp~~~~~~~~~~~lg- 179 (247)
T 3dv9_A 106 KAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRL-NH-NFPGIFQANLMVTAF---DVKYGKPNPEPYLMALKKGG- 179 (247)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHH-HH-HSTTTCCGGGEECGG---GCSSCTTSSHHHHHHHHHHT-
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHH-Hh-hHHHhcCCCeEEecc---cCCCCCCCCHHHHHHHHHcC-
Confidence 4688999999999999999999999999877665555 44 899999 8999999 88999999999999999999
Q ss_pred CCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcc--cccccchhhCChhhhhhhhcC
Q psy6288 101 KPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH--RTEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 101 ~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~ 159 (166)
+++++|++|||+.+|+.+|+++|+.++++.++..... ....++++++++.++.++|.+
T Consensus 180 -~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~ 239 (247)
T 3dv9_A 180 -FKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNWET 239 (247)
T ss_dssp -CCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHHHH
T ss_pred -CChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHHHH
Confidence 9999999999999999999999999999999865544 234789999999999888754
No 21
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=99.89 E-value=1.9e-22 Score=146.22 Aligned_cols=133 Identities=18% Similarity=0.214 Sum_probs=117.2
Q ss_pred hhhhhhhcCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHH
Q psy6288 15 FDMDGLLLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVA 94 (166)
Q Consensus 15 ~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~ 94 (166)
..+........++||+.++|+.|++. ++++++||+... .+.+|+..+|+.+++++ .....||++.+|+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~------l~~~~l~~~f~~~~~~~---~~~~~kp~~~~~~~~ 164 (230)
T 3vay_A 95 EVFLHGRHQVQIFPEVQPTLEILAKT-FTLGVITNGNAD------VRRLGLADYFAFALCAE---DLGIGKPDPAPFLEA 164 (230)
T ss_dssp HHHHHHHTCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC------GGGSTTGGGCSEEEEHH---HHTCCTTSHHHHHHH
T ss_pred HHHHHhhccCccCcCHHHHHHHHHhC-CeEEEEECCchh------hhhcCcHHHeeeeEEcc---ccCCCCcCHHHHHHH
Confidence 33334445678999999999999998 999999999855 34569999999999999 889999999999999
Q ss_pred HHHcCCCCCCCceEEEecCH-hHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhhhhhcC
Q psy6288 95 AKRFDEKPQPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 95 ~~~~~~~~~~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 159 (166)
++++| +++++|++|||+. +|+.+|+++|+.++++.++.........++++++++.++.++|.+
T Consensus 165 ~~~~~--~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~ 228 (230)
T 3vay_A 165 LRRAK--VDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVLAR 228 (230)
T ss_dssp HHHHT--CCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHHHT
T ss_pred HHHhC--CCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHHHh
Confidence 99999 9999999999998 999999999999999999876544467889999999999998865
No 22
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=99.89 E-value=2.3e-22 Score=146.27 Aligned_cols=132 Identities=15% Similarity=0.146 Sum_probs=115.1
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
...++||+.++|+.|++.|++++++||+....+...+ +.+|+..+|+.+++++ .....||++..|+.++++++ +
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~---~~~~~Kp~~~~~~~~~~~~~--~ 166 (232)
T 1zrn_A 93 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVV-SHAGLRDGFDHLLSVD---PVQVYKPDNRVYELAEQALG--L 166 (232)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEESG---GGTCCTTSHHHHHHHHHHHT--S
T ss_pred cCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HhcChHhhhheEEEec---ccCCCCCCHHHHHHHHHHcC--C
Confidence 4678999999999999999999999999877665555 4579999999999999 88899999999999999999 9
Q ss_pred CCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcc-cccccchhhCChhhhhhhhcCC
Q psy6288 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH-RTEAADLVLNSLEEFKPELYGL 160 (166)
Q Consensus 103 ~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~ 160 (166)
++++|++|||+.+|+.+|+++|+.++++.++....+ ....++++++++.++.++|...
T Consensus 167 ~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 225 (232)
T 1zrn_A 167 DRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVELFETA 225 (232)
T ss_dssp CGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTTC---
T ss_pred CcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHHHHhh
Confidence 999999999999999999999999999998754433 3457899999999998877543
No 23
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=99.89 E-value=3.4e-22 Score=143.19 Aligned_cols=133 Identities=23% Similarity=0.243 Sum_probs=116.9
Q ss_pred hcCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccccc--ceEEecCCCCCccCCCCChHHHHHHHHHc
Q psy6288 21 LLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLF--HHVVLGSADPEVKQGKPAPDVFLVAAKRF 98 (166)
Q Consensus 21 ~~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~f--d~v~~~~~~~~~~~~Kp~~~~~~~~~~~~ 98 (166)
.....++||+.++|+.|++.|++++++||+....+...+ +.+|+..+| +.+++++ . ...||++.+++.+++++
T Consensus 66 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~i~~~~---~-~~~kp~~~~~~~~~~~~ 140 (205)
T 3m9l_A 66 AQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTL-EAIGLADCFAEADVLGRD---E-APPKPHPGGLLKLAEAW 140 (205)
T ss_dssp EEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGSCGGGEECTT---T-SCCTTSSHHHHHHHHHT
T ss_pred hhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHH-HHcCchhhcCcceEEeCC---C-CCCCCCHHHHHHHHHHc
Confidence 345688999999999999999999999999987775555 557999999 7888777 4 78999999999999999
Q ss_pred CCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhhhhhcCCCC
Q psy6288 99 DEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPELYGLPP 162 (166)
Q Consensus 99 ~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 162 (166)
+ +++++|++|||+.+|+.+|+++|+.++++.++.. .....++++++++.+|.+.+...++
T Consensus 141 g--~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~--~~~~~ad~v~~~~~el~~~~~~~~~ 200 (205)
T 3m9l_A 141 D--VSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDN--PWPELTDWHARDCAQLRDLLSAEGH 200 (205)
T ss_dssp T--CCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSC--SCGGGCSEECSSHHHHHHHHHHTTC
T ss_pred C--CCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCC--cccccCCEEeCCHHHHHHHHHhccc
Confidence 9 9999999999999999999999999999998863 2335689999999999999886664
No 24
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=99.89 E-value=1.2e-22 Score=145.76 Aligned_cols=124 Identities=15% Similarity=0.196 Sum_probs=105.5
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCC
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQ 103 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 103 (166)
..++||+.++|+.|+++|++++|+||...... ..+ .+ .+|+.+++++ +....||+|.+|..++++++ +.
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~-~~~---~~--~~~d~v~~~~---~~~~~KP~p~~~~~a~~~l~--~~ 103 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALS-TPL---AA--PVNDWMIAAP---RPTAGWPQPDACWMALMALN--VS 103 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHH-HHH---HT--TTTTTCEECC---CCSSCTTSTHHHHHHHHHTT--CS
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHH-HHh---cC--ccCCEEEECC---cCCCCCCChHHHHHHHHHcC--CC
Confidence 36799999999999999999999999987655 222 23 5689999999 88899999999999999999 86
Q ss_pred C-CceEEEecCHhHHHHHHHcCCeEEEecCCCCC-----------------------cc--cccccchhhCChhhhhhhh
Q psy6288 104 P-SKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVP-----------------------KH--RTEAADLVLNSLEEFKPEL 157 (166)
Q Consensus 104 ~-~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~-----------------------~~--~~~~~~~~~~~~~~l~~~l 157 (166)
+ ++|+||||+.+|+.+|+++|+.+|+|.++... .. ....++++++++.+|.++|
T Consensus 104 ~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi~~~~eL~~~l 183 (196)
T 2oda_A 104 QLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVIDHLGELESCL 183 (196)
T ss_dssp CSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHH
T ss_pred CCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEeCCHHHHHHHH
Confidence 5 89999999999999999999999999998642 00 1246889999999998876
Q ss_pred c
Q psy6288 158 Y 158 (166)
Q Consensus 158 ~ 158 (166)
.
T Consensus 184 ~ 184 (196)
T 2oda_A 184 A 184 (196)
T ss_dssp H
T ss_pred H
Confidence 4
No 25
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=99.89 E-value=2.6e-22 Score=143.95 Aligned_cols=129 Identities=16% Similarity=0.176 Sum_probs=113.1
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++||+.++|+.|+++ ++++++||+....+...+ +.+|+..+|+.+++++ +.+..||++..++.++++++
T Consensus 80 ~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~---~~~~~KP~~~~~~~~~~~~~-- 152 (209)
T 2hdo_A 80 DQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGM-RSYPFMMRMAVTISAD---DTPKRKPDPLPLLTALEKVN-- 152 (209)
T ss_dssp GGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHH-TTSGGGGGEEEEECGG---GSSCCTTSSHHHHHHHHHTT--
T ss_pred ccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHH-HHcChHhhccEEEecC---cCCCCCCCcHHHHHHHHHcC--
Confidence 4578899999999999999 999999999877665554 5579999999999998 88899999999999999999
Q ss_pred CCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhhhhh
Q psy6288 102 PQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPEL 157 (166)
Q Consensus 102 ~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~l 157 (166)
+++++|++|||+.+|+.+|+++|+.++++.++....+....++++++++.++.++|
T Consensus 153 ~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~l 208 (209)
T 2hdo_A 153 VAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILELF 208 (209)
T ss_dssp CCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGGC
T ss_pred CCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhccCCEEeCCHHHHHHhh
Confidence 99999999999999999999999999999988654332223899999999998764
No 26
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=99.89 E-value=1.3e-21 Score=144.08 Aligned_cols=130 Identities=16% Similarity=0.193 Sum_probs=114.6
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++||+.++|+.|++.|++++|+||+....+...+ +.+|+..+|+.+++++ .....||++..|..++++++
T Consensus 111 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~gl~~~f~~~~~~~---~~~~~Kp~~~~~~~~~~~~~-- 184 (243)
T 2hsz_A 111 NISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPIL-TAFGIDHLFSEMLGGQ---SLPEIKPHPAPFYYLCGKFG-- 184 (243)
T ss_dssp SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECTT---TSSSCTTSSHHHHHHHHHHT--
T ss_pred ccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHH-HHcCchheEEEEEecc---cCCCCCcCHHHHHHHHHHhC--
Confidence 34678999999999999999999999999977665554 5579999999999998 88889999999999999999
Q ss_pred CCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCc-c-cccccchhhCChhhhhhhh
Q psy6288 102 PQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPK-H-RTEAADLVLNSLEEFKPEL 157 (166)
Q Consensus 102 ~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~-~-~~~~~~~~~~~~~~l~~~l 157 (166)
+++++|++|||+.+|+.+|+++|+.++++.++.... . ....++++++++.++..++
T Consensus 185 ~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~l 242 (243)
T 2hsz_A 185 LYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT 242 (243)
T ss_dssp CCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred cChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHHh
Confidence 999999999999999999999999999999985432 2 3567899999999998765
No 27
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=99.89 E-value=3e-22 Score=149.08 Aligned_cols=129 Identities=19% Similarity=0.245 Sum_probs=114.5
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCC
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQ 103 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 103 (166)
..++||+.++|+.|++.|++++|+||.... +. .+.+.+|+..+|+.+++++ .....||++.+|+.++++++ ++
T Consensus 105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~-~~l~~~gl~~~f~~~~~~~---~~~~~Kp~~~~~~~~~~~~g--~~ 177 (263)
T 3k1z_A 105 WQVLDGAEDTLRECRTRGLRLAVISNFDRR-LE-GILGGLGLREHFDFVLTSE---AAGWPKPDPRIFQEALRLAH--ME 177 (263)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEEESCCTT-HH-HHHHHTTCGGGCSCEEEHH---HHSSCTTSHHHHHHHHHHHT--CC
T ss_pred ceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HH-HHHHhCCcHHhhhEEEeec---ccCCCCCCHHHHHHHHHHcC--CC
Confidence 478999999999999999999999998754 53 4445579999999999999 88999999999999999999 99
Q ss_pred CCceEEEecCH-hHHHHHHHcCCeEEEecCCCCCcc---cccccchhhCChhhhhhhhcC
Q psy6288 104 PSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPTVPKH---RTEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 104 ~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~ 159 (166)
+++|+||||++ +|+.+|+++|+.++++.++..... ....++++++++.++.++|.+
T Consensus 178 ~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l~~ 237 (263)
T 3k1z_A 178 PVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPALDC 237 (263)
T ss_dssp GGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHHHH
T ss_pred HHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHHHH
Confidence 99999999998 999999999999999999864433 334789999999999988764
No 28
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=99.89 E-value=7.2e-22 Score=147.44 Aligned_cols=126 Identities=13% Similarity=0.144 Sum_probs=107.2
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhh--hcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSR--HKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFD 99 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~--~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~ 99 (166)
....++||+.++|+.|+++|++++|+||++...+...+.. ..|+..+|+.+++++ +. +||+|.+|+.++++++
T Consensus 127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~~----~~-~KP~p~~~~~~~~~lg 201 (261)
T 1yns_A 127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTK----IG-HKVESESYRKIADSIG 201 (261)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGG----GC-CTTCHHHHHHHHHHHT
T ss_pred cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEecC----CC-CCCCHHHHHHHHHHhC
Confidence 3468999999999999999999999999998766555433 246999999998775 45 9999999999999999
Q ss_pred CCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCc-c-cccccchhhCChhhhh
Q psy6288 100 EKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPK-H-RTEAADLVLNSLEEFK 154 (166)
Q Consensus 100 ~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~-~-~~~~~~~~~~~~~~l~ 154 (166)
++|++|+||||+.+|+.+|+++|+.+++|.++.... . ....++++++++.++.
T Consensus 202 --~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el~ 256 (261)
T 1yns_A 202 --CSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSELY 256 (261)
T ss_dssp --SCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGCB
T ss_pred --cCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHhC
Confidence 999999999999999999999999999998764332 2 2356889999999874
No 29
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=99.89 E-value=2.6e-22 Score=147.12 Aligned_cols=132 Identities=23% Similarity=0.267 Sum_probs=115.9
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
...++||+.++|+.|++.|++++|+||+....+...+ +.+|+..+|+.+++++ .....||++..|+.++++++ +
T Consensus 92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~---~~~~~Kp~~~~~~~~~~~~g--~ 165 (241)
T 2hoq_A 92 YLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKI-LRLELDDFFEHVIISD---FEGVKKPHPKIFKKALKAFN--V 165 (241)
T ss_dssp HCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHH-HHTTCGGGCSEEEEGG---GGTCCTTCHHHHHHHHHHHT--C
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHH-HHcCcHhhccEEEEeC---CCCCCCCCHHHHHHHHHHcC--C
Confidence 3568999999999999999999999999877665554 5579999999999999 88999999999999999999 9
Q ss_pred CCCceEEEecCH-hHHHHHHHcCCeEEEecCCCCCcccc---cccchhhCChhhhhhhhcCC
Q psy6288 103 QPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPTVPKHRT---EAADLVLNSLEEFKPELYGL 160 (166)
Q Consensus 103 ~~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~ 160 (166)
++++|++|||+. +|+.+|+++|+.++++.++....... ..++++++++.++.++|.+.
T Consensus 166 ~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~l~~~ 227 (241)
T 2hoq_A 166 KPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESLLEVLARE 227 (241)
T ss_dssp CGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHHHHHHHHC
T ss_pred CcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHHHHHHHHH
Confidence 999999999998 99999999999999998876443322 37899999999999887654
No 30
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=99.88 E-value=2.8e-22 Score=145.19 Aligned_cols=131 Identities=19% Similarity=0.259 Sum_probs=108.5
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCch---------------hhHHHHHhhhcCcccccceEEecCCC---------C
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAK---------------ESFELKTSRHKDTLKLFHHVVLGSAD---------P 79 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~---------------~~~~~~l~~~~gl~~~fd~v~~~~~~---------~ 79 (166)
..++||+.++|++|+++|++++|+||+.. ..+...+ +.+|+. |+.++.+... .
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--f~~~~~~~~~~~~~~~~~~~ 125 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSL-ADRDVD--LDGIYYCPHHPQGSVEEFRQ 125 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHH-HHTTCC--CSEEEEECCBTTCSSGGGBS
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHH-HHcCCc--eEEEEECCcCCCCcccccCc
Confidence 47899999999999999999999999993 4454444 446886 7776644200 1
Q ss_pred CccCCCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeE-EEecCCCCCcc-cccccchhhCChhhhhhhh
Q psy6288 80 EVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSC-VMVPDPTVPKH-RTEAADLVLNSLEEFKPEL 157 (166)
Q Consensus 80 ~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~-i~v~~~~~~~~-~~~~~~~~~~~~~~l~~~l 157 (166)
....+||++.+|+.++++++ +++++|+||||+.+|+.+|+++|+.+ ++|.++....+ ....++++++++.++.+++
T Consensus 126 ~~~~~KP~p~~~~~~~~~lg--i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l 203 (211)
T 2gmw_A 126 VCDCRKPHPGMLLSARDYLH--IDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 203 (211)
T ss_dssp CCSSSTTSCHHHHHHHHHHT--BCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred cCcCCCCCHHHHHHHHHHcC--CCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHH
Confidence 46779999999999999999 99999999999999999999999999 99999865433 3356899999999999987
Q ss_pred cC
Q psy6288 158 YG 159 (166)
Q Consensus 158 ~~ 159 (166)
..
T Consensus 204 ~~ 205 (211)
T 2gmw_A 204 KK 205 (211)
T ss_dssp HC
T ss_pred Hh
Confidence 65
No 31
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=99.88 E-value=2.5e-22 Score=148.51 Aligned_cols=134 Identities=29% Similarity=0.384 Sum_probs=118.5
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccce-EEecCCCCCcc-CCCCChHHHHHHHHHcC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHH-VVLGSADPEVK-QGKPAPDVFLVAAKRFD 99 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~-v~~~~~~~~~~-~~Kp~~~~~~~~~~~~~ 99 (166)
....++||+.++|+.|++.|++++|+||+....+...+ +.+|+..+|+. +++++ ... ..||++..|+.++++++
T Consensus 107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~i~~~~---~~~~~~Kp~~~~~~~~~~~lg 182 (259)
T 4eek_A 107 TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKL-RVAGLTELAGEHIYDPS---WVGGRGKPHPDLYTFAAQQLG 182 (259)
T ss_dssp TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHH-HHTTCHHHHCSCEECGG---GGTTCCTTSSHHHHHHHHHTT
T ss_pred ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HhcChHhhccceEEeHh---hcCcCCCCChHHHHHHHHHcC
Confidence 56789999999999999999999999999987775555 55799999999 99998 888 99999999999999999
Q ss_pred CCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCC----cc--cccccchhhCChhhhhhhhcCCC
Q psy6288 100 EKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVP----KH--RTEAADLVLNSLEEFKPELYGLP 161 (166)
Q Consensus 100 ~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~----~~--~~~~~~~~~~~~~~l~~~l~~~~ 161 (166)
+++++|++|||+.+|+.+|+++|+.++++.++... .+ ....++++++++.++.++|....
T Consensus 183 --i~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~~~~ 248 (259)
T 4eek_A 183 --ILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAEAG 248 (259)
T ss_dssp --CCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHHHTT
T ss_pred --CCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHHhcc
Confidence 99999999999999999999999999999988544 22 33568999999999999987543
No 32
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=99.88 E-value=6.4e-22 Score=147.42 Aligned_cols=131 Identities=21% Similarity=0.339 Sum_probs=113.2
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++||+.++|+.|++ +++++|+||++...+...+ +.+|+..+|+.+++++ +....||+|.+|+.++++++
T Consensus 118 ~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l-~~~gl~~~f~~i~~~~---~~~~~KP~p~~~~~~~~~~~-- 190 (260)
T 2gfh_A 118 QHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKI-EACACQSYFDAIVIGG---EQKEEKPAPSIFYHCCDLLG-- 190 (260)
T ss_dssp HTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGG---GSSSCTTCHHHHHHHHHHHT--
T ss_pred hcCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHH-HhcCHHhhhheEEecC---CCCCCCCCHHHHHHHHHHcC--
Confidence 357899999999999998 5999999999987765555 4579999999999999 88899999999999999999
Q ss_pred CCCCceEEEecC-HhHHHHHHHcCC-eEEEecCCCCCcc-cccccchhhCChhhhhhhhcC
Q psy6288 102 PQPSKCLVFEDA-PNGVLGAKAAGM-SCVMVPDPTVPKH-RTEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 102 ~~~~~~i~IGD~-~~Di~~a~~~G~-~~i~v~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~ 159 (166)
++|++|+||||+ .+|+.+|+++|+ .++++.++..... ....++++++++.++.+++..
T Consensus 191 ~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~l~~ 251 (260)
T 2gfh_A 191 VQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQS 251 (260)
T ss_dssp CCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHH
T ss_pred CChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHHHHHHH
Confidence 999999999995 899999999999 8999987643322 345788999999999887653
No 33
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=99.88 E-value=1.2e-21 Score=142.38 Aligned_cols=130 Identities=19% Similarity=0.219 Sum_probs=116.0
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++||+.++|+.|+ .|++++++||+........+ +.+|+..+|+.+++++ .....||++.+|+.+++++|
T Consensus 104 ~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l-~~~~l~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~lg-- 176 (240)
T 3qnm_A 104 TKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKM-RSAGVDRYFKKIILSE---DLGVLKPRPEIFHFALSATQ-- 176 (240)
T ss_dssp GCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGG---GTTCCTTSHHHHHHHHHHTT--
T ss_pred hcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHH-HHcChHhhceeEEEec---cCCCCCCCHHHHHHHHHHcC--
Confidence 35788999999999999 89999999999877775555 4569999999999999 88999999999999999999
Q ss_pred CCCCceEEEecCH-hHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhhhhhcC
Q psy6288 102 PQPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 102 ~~~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 159 (166)
+++++|++|||++ +|+.+|+++|+.++++.++.. ......|+++++++.|+.++..+
T Consensus 177 i~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~-~~~~~~~d~vi~sl~e~~~~~~~ 234 (240)
T 3qnm_A 177 SELRESLMIGDSWEADITGAHGVGMHQAFYNVTER-TVFPFQPTYHIHSLKELMNLLEG 234 (240)
T ss_dssp CCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCC-CCCSSCCSEEESSTHHHHHHTC-
T ss_pred CCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCC-CCcCCCCceEECCHHHHHHHHhc
Confidence 9999999999997 999999999999999999865 33456899999999999998654
No 34
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=99.88 E-value=1e-21 Score=145.87 Aligned_cols=131 Identities=18% Similarity=0.218 Sum_probs=115.2
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccc-cceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKL-FHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~-fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
...++||+.++|+.|++.|++++++||+....+...+ +.+|+..+ |+.+++++ .....||++.+|+.+++++|
T Consensus 109 ~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l-~~~~~~~~~~~~~~~~~---~~~~~kp~~~~~~~~~~~lg-- 182 (277)
T 3iru_A 109 RSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPAL-IAAKEQGYTPASTVFAT---DVVRGRPFPDMALKVALELE-- 182 (277)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHHHTTCCCSEEECGG---GSSSCTTSSHHHHHHHHHHT--
T ss_pred cCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHH-HhcCcccCCCceEecHH---hcCCCCCCHHHHHHHHHHcC--
Confidence 4688999999999999999999999999977665554 44688888 89999999 88999999999999999999
Q ss_pred CCC-CceEEEecCHhHHHHHHHcCCeEEEecCCCCC-----------------------cc--cccccchhhCChhhhhh
Q psy6288 102 PQP-SKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVP-----------------------KH--RTEAADLVLNSLEEFKP 155 (166)
Q Consensus 102 ~~~-~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~-----------------------~~--~~~~~~~~~~~~~~l~~ 155 (166)
+++ ++|++|||+.+|+.+|+++|+.+++|.+|... .. ....++++++++.+|.+
T Consensus 183 i~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~ 262 (277)
T 3iru_A 183 VGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADLET 262 (277)
T ss_dssp CSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHH
T ss_pred CCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEecCHHHHHH
Confidence 999 99999999999999999999999999999641 11 23468999999999998
Q ss_pred hhcC
Q psy6288 156 ELYG 159 (166)
Q Consensus 156 ~l~~ 159 (166)
+|..
T Consensus 263 ~l~~ 266 (277)
T 3iru_A 263 VITD 266 (277)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8753
No 35
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=99.88 E-value=1.2e-21 Score=142.03 Aligned_cols=131 Identities=15% Similarity=0.211 Sum_probs=114.7
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCc---hhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCC
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSA---KESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDE 100 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~---~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 100 (166)
..++|++.++|+.|++.|++++++||+. .......+ +.+|+..+|+.+++++ +....||++..|+.+++++|
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l-~~~~l~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~lg- 172 (235)
T 2om6_A 98 SLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLL-ERFGLMEFIDKTFFAD---EVLSYKPRKEMFEKVLNSFE- 172 (235)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHH-HHTTCGGGCSEEEEHH---HHTCCTTCHHHHHHHHHHTT-
T ss_pred cCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHH-HhCCcHHHhhhheecc---ccCCCCCCHHHHHHHHHHcC-
Confidence 3569999999999999999999999998 77665554 4569999999999998 88899999999999999999
Q ss_pred CCCCCceEEEecCH-hHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhhhhhcCC
Q psy6288 101 KPQPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPELYGL 160 (166)
Q Consensus 101 ~~~~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 160 (166)
+++++|++|||+. +|+.+|+++|+.++++.++....+....++++++++.++.++|..+
T Consensus 173 -i~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 232 (235)
T 2om6_A 173 -VKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDVIELI 232 (235)
T ss_dssp -CCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHHHHHT
T ss_pred -CCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHHHHHH
Confidence 9999999999999 9999999999999999988533334455789999999999887654
No 36
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=99.87 E-value=3.8e-22 Score=144.97 Aligned_cols=135 Identities=17% Similarity=0.187 Sum_probs=110.2
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCch---------------hhHHHHHhhhcCcccccceEEecC-CC--------C
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAK---------------ESFELKTSRHKDTLKLFHHVVLGS-AD--------P 79 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~---------------~~~~~~l~~~~gl~~~fd~v~~~~-~~--------~ 79 (166)
..++||+.++|++|+++|++++|+||++. ..+...+ +.+|+. |+.++.+. .. .
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--~~~~~~~~~~~~g~~~~~~~ 131 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELL-REEGVF--VDMVLACAYHEAGVGPLAIP 131 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHH-HHTTCC--CSEEEEECCCTTCCSTTCCS
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHH-HHcCCc--eeeEEEeecCCCCceeeccc
Confidence 67899999999999999999999999987 4454444 445764 56544331 00 1
Q ss_pred CccCCCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeE-EEecCCCCCcc-cccccchhhCChhhhhhhh
Q psy6288 80 EVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSC-VMVPDPTVPKH-RTEAADLVLNSLEEFKPEL 157 (166)
Q Consensus 80 ~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~-i~v~~~~~~~~-~~~~~~~~~~~~~~l~~~l 157 (166)
....+||++.+|+.++++++ +++++|+||||+.+|+.+|+++|+.+ ++|.+|....+ ....++++++++.++.+.+
T Consensus 132 ~~~~~KP~~~~~~~~~~~~~--i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~l 209 (218)
T 2o2x_A 132 DHPMRKPNPGMLVEAGKRLA--LDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAI 209 (218)
T ss_dssp SCTTSTTSCHHHHHHHHHHT--CCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHH
T ss_pred CCccCCCCHHHHHHHHHHcC--CCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHHH
Confidence 56789999999999999999 99999999999999999999999999 99999865443 3457899999999999988
Q ss_pred cCCCCC
Q psy6288 158 YGLPPF 163 (166)
Q Consensus 158 ~~~~~~ 163 (166)
..+...
T Consensus 210 ~~~~~~ 215 (218)
T 2o2x_A 210 ETLGRD 215 (218)
T ss_dssp HHTCCC
T ss_pred HHHhcc
Confidence 766543
No 37
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=99.87 E-value=3.1e-21 Score=140.17 Aligned_cols=127 Identities=20% Similarity=0.320 Sum_probs=111.3
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++||+.++|+.|++.|++++++||+....+...+ +.+|+..+|+.+++++ .....||++..|+.++++++
T Consensus 100 ~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~f~~i~~~~---~~~~~Kp~~~~~~~~~~~lg-- 173 (231)
T 3kzx_A 100 DNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEI-HHKNLTHYFDSIIGSG---DTGTIKPSPEPVLAALTNIN-- 173 (231)
T ss_dssp CCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEET---SSSCCTTSSHHHHHHHHHHT--
T ss_pred ccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHH-HHCCchhheeeEEccc---ccCCCCCChHHHHHHHHHcC--
Confidence 45789999999999999999999999999887775555 5579999999999999 89999999999999999999
Q ss_pred CCCC-ceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhhhhhcC
Q psy6288 102 PQPS-KCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 102 ~~~~-~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 159 (166)
++++ +|++|||+.+|+.+|+++|+.++++..+.. ..++++++++.++.++|.+
T Consensus 174 i~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~-----~~~~~~~~~~~el~~~l~~ 227 (231)
T 3kzx_A 174 IEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI-----IKDILSFKNFYDIRNFICQ 227 (231)
T ss_dssp CCCSTTEEEEESSHHHHHHHHHTTCEEEEECC----------CCEEESSHHHHHHHHHH
T ss_pred CCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC-----CCCceeeCCHHHHHHHHHH
Confidence 9999 999999999999999999999999966532 4667899999999988754
No 38
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=99.87 E-value=6.6e-21 Score=138.47 Aligned_cols=133 Identities=19% Similarity=0.265 Sum_probs=118.2
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
...++||+.++|+.|++. ++++++||+....+...+ +.+|+..+|+.+++++ .....||++.+|+.+++++|. +
T Consensus 101 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~~g~-~ 174 (238)
T 3ed5_A 101 GHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRL-RDSGLFPFFKDIFVSE---DTGFQKPMKEYFNYVFERIPQ-F 174 (238)
T ss_dssp CCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHH-HHTTCGGGCSEEEEGG---GTTSCTTCHHHHHHHHHTSTT-C
T ss_pred cCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHH-HHcChHhhhheEEEec---ccCCCCCChHHHHHHHHHcCC-C
Confidence 468899999999999999 999999999987775555 4469999999999999 889999999999999999972 5
Q ss_pred CCCceEEEecCH-hHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhhhhhcCCC
Q psy6288 103 QPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPELYGLP 161 (166)
Q Consensus 103 ~~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 161 (166)
++++|++|||+. +|+.+|+++|+.++++.++.........++++++++.++.++|.+..
T Consensus 175 ~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~~ 234 (238)
T 3ed5_A 175 SAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHILNIEN 234 (238)
T ss_dssp CGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHHTCCC
T ss_pred ChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHHHhhc
Confidence 799999999998 99999999999999999886555556788999999999999987654
No 39
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=99.87 E-value=5.2e-22 Score=144.12 Aligned_cols=131 Identities=18% Similarity=0.222 Sum_probs=118.1
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
...++|++.++|+.|++. ++++++||+....+...+ +.+|+..+|+.+++++ .....||++.+++.+++++| +
T Consensus 98 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~~~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~~~--~ 170 (234)
T 3u26_A 98 YGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFL-DALGIKDLFDSITTSE---EAGFFKPHPRIFELALKKAG--V 170 (234)
T ss_dssp HCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEHH---HHTBCTTSHHHHHHHHHHHT--C
T ss_pred hCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHH-HHcCcHHHcceeEecc---ccCCCCcCHHHHHHHHHHcC--C
Confidence 467899999999999999 999999999987665555 5579999999999999 88899999999999999999 9
Q ss_pred CCCceEEEecCH-hHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhhhhhcCC
Q psy6288 103 QPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPELYGL 160 (166)
Q Consensus 103 ~~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 160 (166)
++++|++|||+. +|+.+|+++|+.++++.++....+....++++++++.++.++|.++
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l~~~ 229 (234)
T 3u26_A 171 KGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDEL 229 (234)
T ss_dssp CGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHHHHHHHHH
T ss_pred CchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHHHHHHHHH
Confidence 999999999998 9999999999999999999666655568999999999999988654
No 40
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=99.87 E-value=1e-21 Score=142.81 Aligned_cols=118 Identities=35% Similarity=0.507 Sum_probs=93.3
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCC
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQP 104 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 104 (166)
.++||+.++|+.|++.|++++|+||+.. .. .+.+.+|+..+|+.+++++ .....||++.+|+.+++++| +++
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~-~~l~~~gl~~~f~~i~~~~---~~~~~Kp~~~~~~~~~~~lg--i~~ 163 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--AP-KILRRLAIIDDFHAIVDPT---TLAKGKPDPDIFLTAAAMLD--VSP 163 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HH-HHHHHTTCTTTCSEECCC------------CCHHHHHHHHHT--SCG
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HH-HHHHHcCcHhhcCEEeeHh---hCCCCCCChHHHHHHHHHcC--CCH
Confidence 3799999999999999999999999864 43 4445579999999999999 88899999999999999999 999
Q ss_pred CceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhh
Q psy6288 105 SKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFK 154 (166)
Q Consensus 105 ~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~ 154 (166)
++|++|||+.+|+.+|+++|+.++++.++. . ...++++++++.++.
T Consensus 164 ~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~---~-~~~ad~v~~s~~el~ 209 (233)
T 3nas_A 164 ADCAAIEDAEAGISAIKSAGMFAVGVGQGQ---P-MLGADLVVRQTSDLT 209 (233)
T ss_dssp GGEEEEECSHHHHHHHHHTTCEEEECC-----------CSEECSSGGGCC
T ss_pred HHEEEEeCCHHHHHHHHHcCCEEEEECCcc---c-cccCCEEeCChHhCC
Confidence 999999999999999999999999996652 2 237889999998886
No 41
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=99.87 E-value=3.8e-21 Score=142.06 Aligned_cols=132 Identities=20% Similarity=0.234 Sum_probs=114.3
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++||+.++|+.|+ |++++|+||+....+...+ +.+|+..+|+.+++++ .....||++..|+.++++++
T Consensus 90 ~~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l-~~~gl~~~f~~~~~~~---~~~~~Kp~~~~~~~~~~~~~-- 161 (253)
T 1qq5_A 90 NRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALV-ANAGLTDSFDAVISVD---AKRVFKPHPDSYALVEEVLG-- 161 (253)
T ss_dssp GSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGG---GGTCCTTSHHHHHHHHHHHC--
T ss_pred hcCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHH-HHCCchhhccEEEEcc---ccCCCCCCHHHHHHHHHHcC--
Confidence 34688999999999999 9999999999987775554 5569999999999999 88999999999999999999
Q ss_pred CCCCceEEEecCHhHHHHHHHcCCeEEEecC-----------------------CCCCc-ccccccchhhCChhhhhhhh
Q psy6288 102 PQPSKCLVFEDAPNGVLGAKAAGMSCVMVPD-----------------------PTVPK-HRTEAADLVLNSLEEFKPEL 157 (166)
Q Consensus 102 ~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~-----------------------~~~~~-~~~~~~~~~~~~~~~l~~~l 157 (166)
+++++|++|||+.+|+.+|+++|+.++++.+ +.... .....++++++++.++..+|
T Consensus 162 ~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 241 (253)
T 1qq5_A 162 VTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLV 241 (253)
T ss_dssp CCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHH
T ss_pred CCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHHHHHH
Confidence 9999999999999999999999999999988 32212 23457899999999999887
Q ss_pred cCCC
Q psy6288 158 YGLP 161 (166)
Q Consensus 158 ~~~~ 161 (166)
.++.
T Consensus 242 ~~~~ 245 (253)
T 1qq5_A 242 RGMA 245 (253)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 6543
No 42
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=99.86 E-value=1.1e-20 Score=141.72 Aligned_cols=135 Identities=15% Similarity=0.141 Sum_probs=112.3
Q ss_pred cCCccchhHHHHHHHHHHCCC--CEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCC-CccCCCCChHHHHHHHHHc
Q psy6288 22 LGYNLAIGALRLINHLHKHNI--PFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADP-EVKQGKPAPDVFLVAAKRF 98 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~--~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~-~~~~~Kp~~~~~~~~~~~~ 98 (166)
....++||+.++|+.|++.|+ +++|+||+....+...+ +.+|+..+|+.+++++... ....+||++.+|+.+++++
T Consensus 139 ~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l-~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~l 217 (282)
T 3nuq_A 139 DILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCL-RLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKES 217 (282)
T ss_dssp GTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHH-HHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHH
T ss_pred hccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHH-HhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHc
Confidence 347789999999999999999 99999999987775555 4569999999999886111 1256799999999999999
Q ss_pred CCCCCC-CceEEEecCHhHHHHHHHcCC-eEEEecCCCCCcc--cccccchhhCChhhhhhhhcC
Q psy6288 99 DEKPQP-SKCLVFEDAPNGVLGAKAAGM-SCVMVPDPTVPKH--RTEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 99 ~~~~~~-~~~i~IGD~~~Di~~a~~~G~-~~i~v~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~ 159 (166)
| +++ ++|++|||+.+|+.+|+++|+ .++++..+..... ....++++++++.++.++|-.
T Consensus 218 g--i~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~l~~ 280 (282)
T 3nuq_A 218 G--LARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVVSD 280 (282)
T ss_dssp T--CCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGTSGG
T ss_pred C--CCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHHhhh
Confidence 9 998 999999999999999999999 6778877754432 345778999999999988754
No 43
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=99.86 E-value=4.7e-21 Score=136.82 Aligned_cols=128 Identities=15% Similarity=0.230 Sum_probs=112.2
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++||+.+ |+.|++. ++++|+||++...+...+ +.+|+..+|+.+++++ .....||++..|..++++++
T Consensus 71 ~~~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~---~~~~~Kp~~~~~~~~~~~~~-- 142 (201)
T 2w43_A 71 KNLKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHL-ERNGLLRYFKGIFSAE---SVKEYKPSPKVYKYFLDSIG-- 142 (201)
T ss_dssp HTCEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGG---GGTCCTTCHHHHHHHHHHHT--
T ss_pred cccccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHH-HHCCcHHhCcEEEehh---hcCCCCCCHHHHHHHHHhcC--
Confidence 34788999999 9999999 999999999877665554 5579999999999998 88899999999999999998
Q ss_pred CCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcc-cccccchhhCChhhhhhhhcC
Q psy6288 102 PQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH-RTEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 102 ~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~ 159 (166)
+++|++|||+.+|+.+|+++|+.++++.++....+ ....++++++++.++.++|..
T Consensus 143 --~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 199 (201)
T 2w43_A 143 --AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEWILR 199 (201)
T ss_dssp --CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHHHHH
T ss_pred --CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHHHHh
Confidence 89999999999999999999999999999754433 345789999999999887753
No 44
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=99.86 E-value=3.1e-20 Score=133.62 Aligned_cols=130 Identities=25% Similarity=0.380 Sum_probs=115.6
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
...++|++.++|+.|++.|++++++|++....+...+ +.+|+..+|+.+++++ .....||++..++.++++++ +
T Consensus 92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~~~~~~~~~~~~~---~~~~~kp~~~~~~~~~~~~~--i 165 (226)
T 1te2_A 92 TRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVL-TMFDLRDSFDALASAE---KLPYSKPHPQVYLDCAAKLG--V 165 (226)
T ss_dssp HCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEECT---TSSCCTTSTHHHHHHHHHHT--S
T ss_pred cCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHH-HhcCcHhhCcEEEecc---ccCCCCCChHHHHHHHHHcC--C
Confidence 4678999999999999999999999999877665444 5579999999999998 88889999999999999999 9
Q ss_pred CCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcc-cccccchhhCChhhhhhhhc
Q psy6288 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH-RTEAADLVLNSLEEFKPELY 158 (166)
Q Consensus 103 ~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~-~~~~~~~~~~~~~~l~~~l~ 158 (166)
++++|++|||+.+|+.+|+.+|+.++++.++..... ....++++++++.++.+.++
T Consensus 166 ~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~~~ 222 (226)
T 1te2_A 166 DPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKDL 222 (226)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHHHH
T ss_pred CHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhHHHh
Confidence 999999999999999999999999999999865443 45788999999999988665
No 45
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=99.86 E-value=1.8e-21 Score=152.37 Aligned_cols=136 Identities=20% Similarity=0.216 Sum_probs=115.1
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccc--eEEecCCCCCcc-----------CCCCChHH
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFH--HVVLGSADPEVK-----------QGKPAPDV 90 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd--~v~~~~~~~~~~-----------~~Kp~~~~ 90 (166)
..++||+.++|+.|+++|++++|+||++...+...+. ++|+..+|+ .+++++ +.. .+||+|..
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~-~lgL~~~Fd~~~Ivs~d---dv~~~~~~~~~~kp~~KP~P~~ 289 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFE-NLGLLPYFEADFIATAS---DVLEAENMYPQARPLGKPNPFS 289 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHH-HHTCGGGSCGGGEECHH---HHHHHHHHSTTSCCCCTTSTHH
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHH-HcCChHhcCCCEEEecc---cccccccccccccCCCCCCHHH
Confidence 4789999999999999999999999999887766654 469999999 888887 554 48999999
Q ss_pred HHHHHHHcCC------------CCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCC---cc--cccccchhhCChhhh
Q psy6288 91 FLVAAKRFDE------------KPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVP---KH--RTEAADLVLNSLEEF 153 (166)
Q Consensus 91 ~~~~~~~~~~------------~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~---~~--~~~~~~~~~~~~~~l 153 (166)
|..++++++. .++|++|+||||+.+|+.+|+++|+.+++|.++... .. ....++++++++.++
T Consensus 290 ~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL 369 (384)
T 1qyi_A 290 YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGEL 369 (384)
T ss_dssp HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGH
T ss_pred HHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHHH
Confidence 9999999871 147999999999999999999999999999998642 12 134789999999999
Q ss_pred hhhhcCCCCC
Q psy6288 154 KPELYGLPPF 163 (166)
Q Consensus 154 ~~~l~~~~~~ 163 (166)
.+.+.+...-
T Consensus 370 ~~~l~~~~~~ 379 (384)
T 1qyi_A 370 RGVLDNLLEH 379 (384)
T ss_dssp HHHHSCTTTT
T ss_pred HHHHHHHHhh
Confidence 9988766543
No 46
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=99.86 E-value=1.7e-21 Score=130.93 Aligned_cols=114 Identities=21% Similarity=0.208 Sum_probs=100.2
Q ss_pred hhhhhhhc-CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHH
Q psy6288 15 FDMDGLLL-GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLV 93 (166)
Q Consensus 15 ~~~~~~~~-~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~ 93 (166)
.|+++.+. ...++||+.++|+.|++.|++++|+||++...+...+. .+|+..+|+.+++++ .....||++..|+.
T Consensus 7 ~D~DgtL~~~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~-~~~l~~~f~~i~~~~---~~~~~Kp~~~~~~~ 82 (137)
T 2pr7_A 7 VDYAGVLDGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIR-ELETNGVVDKVLLSG---ELGVEKPEEAAFQA 82 (137)
T ss_dssp ECSTTTTSSCHHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHH-HHHHTTSSSEEEEHH---HHSCCTTSHHHHHH
T ss_pred EeccceecCCCccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH-HCChHhhccEEEEec---cCCCCCCCHHHHHH
Confidence 45556443 35589999999999999999999999998777655554 468999999999998 88889999999999
Q ss_pred HHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCC
Q psy6288 94 AAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 94 ~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~ 134 (166)
++++++ +++++|+||||+.+|+.+|+++|+.++++.++.
T Consensus 83 ~~~~~~--~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~~~ 121 (137)
T 2pr7_A 83 AADAID--LPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFD 121 (137)
T ss_dssp HHHHTT--CCGGGEEEEESCHHHHHHHHHHTCEEEECSCHH
T ss_pred HHHHcC--CCcccEEEEcCCHHHHHHHHHCCCEEEEeCChH
Confidence 999999 999999999999999999999999999997763
No 47
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=99.85 E-value=7e-21 Score=138.21 Aligned_cols=129 Identities=16% Similarity=0.218 Sum_probs=110.9
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHH---HHHc
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVA---AKRF 98 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~---~~~~ 98 (166)
....++||+.++|+.|++ |++++++||+....+...+ +. +..+|+.+++++ +....||++..|+.+ ++++
T Consensus 96 ~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l-~~--l~~~fd~i~~~~---~~~~~KP~~~~~~~~l~~~~~l 168 (240)
T 3smv_A 96 KNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSN-AK--LGVEFDHIITAQ---DVGSYKPNPNNFTYMIDALAKA 168 (240)
T ss_dssp GGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHH-TT--TCSCCSEEEEHH---HHTSCTTSHHHHHHHHHHHHHT
T ss_pred hcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHH-Hh--cCCccCEEEEcc---ccCCCCCCHHHHHHHHHHHHhc
Confidence 456899999999999999 8999999999987665554 32 668999999999 899999999999999 8999
Q ss_pred CCCCCCCceEEEecCH-hHHHHHHHcCCeEEEecCCC-------CCcc-cccccchhhCChhhhhhhhcC
Q psy6288 99 DEKPQPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPT-------VPKH-RTEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 99 ~~~~~~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~~-------~~~~-~~~~~~~~~~~~~~l~~~l~~ 159 (166)
+ ++|++|++|||+. +|+.+|+++|+.++++..+. .... ....++++++++.++.++|.+
T Consensus 169 g--i~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l~~ 236 (240)
T 3smv_A 169 G--IEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAHKQ 236 (240)
T ss_dssp T--CCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHHHH
T ss_pred C--CCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHHHH
Confidence 9 9999999999997 99999999999999998651 1122 447889999999999988764
No 48
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=99.85 E-value=1.7e-20 Score=135.45 Aligned_cols=125 Identities=15% Similarity=0.139 Sum_probs=105.4
Q ss_pred cCCccchhHHHHHHHHHHCC-CCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCC
Q psy6288 22 LGYNLAIGALRLINHLHKHN-IPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDE 100 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g-~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 100 (166)
....++||+.++|+.|++.| ++++++||+....+...+ +.+|+..+|+.++++. ||++..++.+++++|
T Consensus 102 ~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l-~~~~~~~~f~~~~~~~--------kpk~~~~~~~~~~lg- 171 (234)
T 3ddh_A 102 MPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKL-ERSGLSPYFDHIEVMS--------DKTEKEYLRLLSILQ- 171 (234)
T ss_dssp CCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHH-HHHTCGGGCSEEEEES--------CCSHHHHHHHHHHHT-
T ss_pred ccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHH-HHhCcHhhhheeeecC--------CCCHHHHHHHHHHhC-
Confidence 35688999999999999999 999999999877665555 4469999999998765 899999999999999
Q ss_pred CCCCCceEEEecCH-hHHHHHHHcCCeEEEecCC----CCCcc-cccccchhhCChhhhhhhh
Q psy6288 101 KPQPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDP----TVPKH-RTEAADLVLNSLEEFKPEL 157 (166)
Q Consensus 101 ~~~~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~----~~~~~-~~~~~~~~~~~~~~l~~~l 157 (166)
+++++|++|||++ +|+.+|+++|+.+++|..+ ....+ ....++++++++.|+.++|
T Consensus 172 -i~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~l 233 (234)
T 3ddh_A 172 -IAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSLL 233 (234)
T ss_dssp -CCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHHC
T ss_pred -CCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHhc
Confidence 9999999999997 9999999999999999544 33333 2334499999999998875
No 49
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=99.85 E-value=2.1e-20 Score=132.56 Aligned_cols=124 Identities=14% Similarity=0.161 Sum_probs=111.7
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++|++.++|+.|++.|++++++|++...... .+ +.+++..+|+.+++++ .....||++..+..++++++
T Consensus 82 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~-~~~~~~~~f~~~~~~~---~~~~~Kp~~~~~~~~~~~~~-- 154 (207)
T 2go7_A 82 AQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-IL-KDLGVESYFTEILTSQ---SGFVRKPSPEAATYLLDKYQ-- 154 (207)
T ss_dssp GGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HH-HHHTCGGGEEEEECGG---GCCCCTTSSHHHHHHHHHHT--
T ss_pred ccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HH-HHcCchhheeeEEecC---cCCCCCCCcHHHHHHHHHhC--
Confidence 34678999999999999999999999999877765 44 5569999999999998 78889999999999999999
Q ss_pred CCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhhhhhc
Q psy6288 102 PQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPELY 158 (166)
Q Consensus 102 ~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 158 (166)
+++++|++|||+.+|+.+|+.+|+.++++.++. . .++++++++.++.++|.
T Consensus 155 i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~-----~a~~v~~~~~el~~~l~ 205 (207)
T 2go7_A 155 LNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y-----EGNHRIQALADISRIFE 205 (207)
T ss_dssp CCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C-----TTEEECSSTTHHHHHTS
T ss_pred CCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C-----CCCEEeCCHHHHHHHHh
Confidence 999999999999999999999999999999885 3 68899999999988764
No 50
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=99.85 E-value=6e-20 Score=132.03 Aligned_cols=134 Identities=21% Similarity=0.227 Sum_probs=111.0
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
...++|++.++++.|++.|++++++|++........+ +.+|+..+|+.+++++ .....||++..+..++++++ +
T Consensus 87 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~--~ 160 (225)
T 3d6j_A 87 NTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFL-RNHMPDDWFDIIIGGE---DVTHHKPDPEGLLLAIDRLK--A 160 (225)
T ss_dssp GCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHH-HTSSCTTCCSEEECGG---GCSSCTTSTHHHHHHHHHTT--C
T ss_pred cCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHH-HHcCchhheeeeeehh---hcCCCCCChHHHHHHHHHhC--C
Confidence 4678999999999999999999999999877665555 4569999999999988 78889999999999999999 9
Q ss_pred CCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcc-cc-cccchhhCChhhhhhhhcCCCC
Q psy6288 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH-RT-EAADLVLNSLEEFKPELYGLPP 162 (166)
Q Consensus 103 ~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~-~~-~~~~~~~~~~~~l~~~l~~~~~ 162 (166)
+++++++|||+.+|+.+|+.+|+.++++.++..... .. ..++++++++.++.+.|..+..
T Consensus 161 ~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~ 222 (225)
T 3d6j_A 161 CPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDKSG 222 (225)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC--------
T ss_pred ChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHHHhhhhhcC
Confidence 999999999999999999999999999999865443 22 3489999999999998876543
No 51
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=99.84 E-value=1.7e-20 Score=137.36 Aligned_cols=130 Identities=9% Similarity=0.120 Sum_probs=112.8
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++||+.++|+.|++. ++++++||+....+...+ +.+|+. |+.+++++ .....||++..|+.+++++|
T Consensus 113 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~~~--f~~~~~~~---~~~~~kp~~~~~~~~~~~lg-- 183 (254)
T 3umg_A 113 HVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMA-KNAGIP--WDVIIGSD---INRKYKPDPQAYLRTAQVLG-- 183 (254)
T ss_dssp GSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHH-HHHTCC--CSCCCCHH---HHTCCTTSHHHHHHHHHHTT--
T ss_pred hhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHH-HhCCCC--eeEEEEcC---cCCCCCCCHHHHHHHHHHcC--
Confidence 4578899999999999996 999999999977765554 446875 89999998 88999999999999999999
Q ss_pred CCCCceEEEecCHhHHHHHHHcCCeEEEec----CCCCCcc-c--ccccchhhCChhhhhhhhcCC
Q psy6288 102 PQPSKCLVFEDAPNGVLGAKAAGMSCVMVP----DPTVPKH-R--TEAADLVLNSLEEFKPELYGL 160 (166)
Q Consensus 102 ~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~----~~~~~~~-~--~~~~~~~~~~~~~l~~~l~~~ 160 (166)
+++++|++|||+.+|+.+|+++|+.++++. +|..... . ...++++++++.++.++|...
T Consensus 184 i~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~~ 249 (254)
T 3umg_A 184 LHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRAG 249 (254)
T ss_dssp CCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHHC
T ss_pred CChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcCC
Confidence 999999999999999999999999999998 5543333 2 468899999999999988754
No 52
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=99.84 E-value=2.4e-20 Score=136.97 Aligned_cols=129 Identities=16% Similarity=0.182 Sum_probs=112.0
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++|++.++|+.|++. ++++++||+....+...+ +.+|+. |+.+++++ .....||++.+|+.+++++|
T Consensus 117 ~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l-~~~g~~--f~~~~~~~---~~~~~kp~~~~~~~~~~~lg-- 187 (254)
T 3umc_A 117 HRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVA-RHAGLP--WDMLLCAD---LFGHYKPDPQVYLGACRLLD-- 187 (254)
T ss_dssp GSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHH-HHHTCC--CSEECCHH---HHTCCTTSHHHHHHHHHHHT--
T ss_pred hcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHH-HHcCCC--cceEEeec---ccccCCCCHHHHHHHHHHcC--
Confidence 4567899999999999985 999999999877665554 446775 89999998 88999999999999999999
Q ss_pred CCCCceEEEecCHhHHHHHHHcCCeEEEec----CCCCCcc-c--ccccchhhCChhhhhhhhcC
Q psy6288 102 PQPSKCLVFEDAPNGVLGAKAAGMSCVMVP----DPTVPKH-R--TEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 102 ~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~----~~~~~~~-~--~~~~~~~~~~~~~l~~~l~~ 159 (166)
+++++|++|||+.+|+.+|+++|+.++++. +|....+ . ...++++++++.+|.++|..
T Consensus 188 i~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l~~ 252 (254)
T 3umc_A 188 LPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQLAA 252 (254)
T ss_dssp CCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHHHC
T ss_pred CChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHhcc
Confidence 999999999999999999999999999999 5543333 2 56889999999999998764
No 53
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=99.83 E-value=1.4e-19 Score=134.23 Aligned_cols=132 Identities=16% Similarity=0.198 Sum_probs=112.9
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccccc-ceEEecCCCCCccCCCCChHHHHHHHHHcCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLF-HHVVLGSADPEVKQGKPAPDVFLVAAKRFDE 100 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~f-d~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 100 (166)
....++||+.++|+.|++.|++++++|++....+...+ +.+|+..+| +.+++++ .....||++..+..+++++|
T Consensus 100 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~~~~~~~~~~~~~~---~~~~~kp~~~~~~~~~~~lg- 174 (267)
T 1swv_A 100 RYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVA-KEAALQGYKPDFLVTPD---DVPAGRPYPWMCYKNAMELG- 174 (267)
T ss_dssp GGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHH-HHHHHTTCCCSCCBCGG---GSSCCTTSSHHHHHHHHHHT-
T ss_pred cccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHH-HHcCCcccChHheecCC---ccCCCCCCHHHHHHHHHHhC-
Confidence 34678999999999999999999999999877664444 445888886 8888888 78889999999999999999
Q ss_pred CCCC-CceEEEecCHhHHHHHHHcCCeEEEecCCCCC------------------------cc-cccccchhhCChhhhh
Q psy6288 101 KPQP-SKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVP------------------------KH-RTEAADLVLNSLEEFK 154 (166)
Q Consensus 101 ~~~~-~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~------------------------~~-~~~~~~~~~~~~~~l~ 154 (166)
+++ ++|++|||+.+|+.+|+.+|+.+++|.++... .. ....++++++++.++.
T Consensus 175 -i~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~ 253 (267)
T 1swv_A 175 -VYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELE 253 (267)
T ss_dssp -CCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHH
T ss_pred -CCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceeccCHHHHH
Confidence 999 99999999999999999999999999998652 11 2345899999999998
Q ss_pred hhhcC
Q psy6288 155 PELYG 159 (166)
Q Consensus 155 ~~l~~ 159 (166)
.+|..
T Consensus 254 ~~l~~ 258 (267)
T 1swv_A 254 SVMEH 258 (267)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87754
No 54
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=99.83 E-value=5e-20 Score=133.61 Aligned_cols=133 Identities=12% Similarity=0.142 Sum_probs=110.4
Q ss_pred CCccchhHHHHHHHHHHC-CCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCcc-CCCCChHHHHHHHHHcCC
Q psy6288 23 GYNLAIGALRLINHLHKH-NIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVK-QGKPAPDVFLVAAKRFDE 100 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~-~~Kp~~~~~~~~~~~~~~ 100 (166)
...++||+.++|+.|++. |++++|+||+....+...+ +.+|+..+|+.+++++ +.. ..||.+..++.+++++|.
T Consensus 91 ~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~---~~~~~~k~~~~~~~~~~~~lg~ 166 (234)
T 2hcf_A 91 DITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKL-KLPGIDHYFPFGAFAD---DALDRNELPHIALERARRMTGA 166 (234)
T ss_dssp GEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHH-HTTTCSTTCSCEECTT---TCSSGGGHHHHHHHHHHHHHCC
T ss_pred CCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHH-HHCCchhhcCcceecC---CCcCccchHHHHHHHHHHHhCC
Confidence 457899999999999999 9999999999977665555 5569999999877776 443 456889999999999982
Q ss_pred CCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCccc--ccccchhhCChhhhhhhhcC
Q psy6288 101 KPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHR--TEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 101 ~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~ 159 (166)
.+++++|++|||+.+|+.+|+++|+.+++|.++...... ...++++++++.++.++|..
T Consensus 167 ~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el~~~l~~ 227 (234)
T 2hcf_A 167 NYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLAS 227 (234)
T ss_dssp CCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHH
T ss_pred CCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhHHHHHHH
Confidence 137999999999999999999999999999998654442 23488999999999887754
No 55
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=99.82 E-value=1.8e-20 Score=132.17 Aligned_cols=104 Identities=13% Similarity=0.139 Sum_probs=86.7
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCC---------------chhhHHHHHhhhcCcccccceEEec-----CCCCCcc
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSS---------------AKESFELKTSRHKDTLKLFHHVVLG-----SADPEVK 82 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~---------------~~~~~~~~l~~~~gl~~~fd~v~~~-----~~~~~~~ 82 (166)
...++||+.++|+.|++.|++++|+||+ ....+... .+.+|+. |+.++.+ + +..
T Consensus 40 ~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~-l~~~gl~--fd~v~~s~~~~~~---~~~ 113 (176)
T 2fpr_A 40 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQI-FTSQGVQ--FDEVLICPHLPAD---ECD 113 (176)
T ss_dssp GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHH-HHHTTCC--EEEEEEECCCGGG---CCS
T ss_pred HCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHH-HHHcCCC--eeEEEEcCCCCcc---ccc
Confidence 4678999999999999999999999998 44445444 4556886 8888654 5 678
Q ss_pred CCCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCC
Q psy6288 83 QGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 83 ~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~ 134 (166)
..||+|.+|+.++++++ +++++|+||||+.+|+.+|+++|+.++++.++.
T Consensus 114 ~~KP~p~~~~~~~~~~g--i~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~ 163 (176)
T 2fpr_A 114 CRKPKVKLVERYLAEQA--MDRANSYVIGDRATDIQLAENMGINGLRYDRET 163 (176)
T ss_dssp SSTTSCGGGGGGC------CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred ccCCCHHHHHHHHHHcC--CCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCc
Confidence 89999999999999999 999999999999999999999999999998874
No 56
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=99.82 E-value=1.8e-19 Score=134.05 Aligned_cols=121 Identities=13% Similarity=0.106 Sum_probs=96.7
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhh----------cCcccccceEEecCCCCCccCCCCChHHHH
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRH----------KDTLKLFHHVVLGSADPEVKQGKPAPDVFL 92 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~----------~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~ 92 (166)
...++||+.++|+. |++++|+||++...+...+... +++..+|+.++.+. ....||+|+.|.
T Consensus 123 ~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~----~~g~KP~p~~~~ 194 (253)
T 2g80_A 123 KAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDIN----TSGKKTETQSYA 194 (253)
T ss_dssp CBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHH----HHCCTTCHHHHH
T ss_pred cCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEeee----ccCCCCCHHHHH
Confidence 46789999999998 8999999999988765555432 25777788777554 212599999999
Q ss_pred HHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhh
Q psy6288 93 VAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEF 153 (166)
Q Consensus 93 ~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l 153 (166)
.+++++| ++|++|+||||+..|+.+|+++|+.++++.++.........++.++++|.+|
T Consensus 195 ~a~~~lg--~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 253 (253)
T 2g80_A 195 NILRDIG--AKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 253 (253)
T ss_dssp HHHHHHT--CCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred HHHHHcC--CCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhhC
Confidence 9999999 9999999999999999999999999999988533322112367888888764
No 57
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=99.82 E-value=2.9e-19 Score=128.42 Aligned_cols=119 Identities=24% Similarity=0.374 Sum_probs=102.8
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCC
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQ 103 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 103 (166)
..++||+.++|+.|++.|++++++|+. ...... .+.+|+..+|+.+++++ .....||++..++.+++++| ++
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~-l~~~~l~~~f~~~~~~~---~~~~~Kp~~~~~~~~~~~lg--i~ 161 (221)
T 2wf7_A 90 ADVYPGILQLLKDLRSNKIKIALASAS--KNGPFL-LERMNLTGYFDAIADPA---EVAASKPAPDIFIAAAHAVG--VA 161 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHH-HHHTTCGGGCSEECCTT---TSSSCTTSSHHHHHHHHHTT--CC
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHH-HHHcChHHHcceEeccc---cCCCCCCChHHHHHHHHHcC--CC
Confidence 568999999999999999999999998 334333 45579999999999998 88999999999999999999 99
Q ss_pred CCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhh
Q psy6288 104 PSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFK 154 (166)
Q Consensus 104 ~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~ 154 (166)
+++|++|||+.+|+.+|+.+|+.++++... .... .+++++.++.++.
T Consensus 162 ~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~---~~~~-~a~~v~~~~~el~ 208 (221)
T 2wf7_A 162 PSESIGLEDSQAGIQAIKDSGALPIGVGRP---EDLG-DDIVIVPDTSHYT 208 (221)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEESCH---HHHC-SSSEEESSGGGCC
T ss_pred hhHeEEEeCCHHHHHHHHHCCCEEEEECCH---HHhc-cccchhcCHHhCC
Confidence 999999999999999999999999998432 2233 6888899988864
No 58
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=99.81 E-value=1.9e-19 Score=128.07 Aligned_cols=105 Identities=17% Similarity=0.213 Sum_probs=96.1
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
...++||+.++|+.|++.| +++++||++...+...+ +.+|+..+|+.+++++ .....||++..++.++++++ +
T Consensus 84 ~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l-~~~~~~~~f~~~~~~~---~~~~~Kp~~~~~~~~~~~~~--~ 156 (200)
T 3cnh_A 84 QSQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRI-RTFGLGEFLLAFFTSS---ALGVMKPNPAMYRLGLTLAQ--V 156 (200)
T ss_dssp TCCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHH-HHHTGGGTCSCEEEHH---HHSCCTTCHHHHHHHHHHHT--C
T ss_pred cCccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHH-HhCCHHHhcceEEeec---ccCCCCCCHHHHHHHHHHcC--C
Confidence 4568999999999999999 99999999977765555 4469999999999998 88899999999999999999 9
Q ss_pred CCCceEEEecCHhHHHHHHHcCCeEEEecCCC
Q psy6288 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 103 ~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~ 134 (166)
++++|++|||+.+|+.+|+++|+.++++.++.
T Consensus 157 ~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~ 188 (200)
T 3cnh_A 157 RPEEAVMVDDRLQNVQAARAVGMHAVQCVDAA 188 (200)
T ss_dssp CGGGEEEEESCHHHHHHHHHTTCEEEECSCHH
T ss_pred CHHHeEEeCCCHHHHHHHHHCCCEEEEECCch
Confidence 99999999999999999999999999998774
No 59
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=99.80 E-value=3.1e-19 Score=129.81 Aligned_cols=107 Identities=16% Similarity=0.222 Sum_probs=95.4
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHH--h---hhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcC
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKESFELKT--S---RHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFD 99 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l--~---~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~ 99 (166)
.++||+.++|+.|++. ++++|+||+........+ . +.+|+..+|+.+++++ +....||+|.+|+.++++++
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~---~~~~~KP~~~~~~~~~~~~g 187 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSY---EMKMAKPEPEIFKAVTEDAG 187 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHH---HHTCCTTCHHHHHHHHHHHT
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeec---ccCCCCCCHHHHHHHHHHcC
Confidence 4679999999999998 999999999977664222 2 4469999999999999 89999999999999999999
Q ss_pred CCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCc
Q psy6288 100 EKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPK 137 (166)
Q Consensus 100 ~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~ 137 (166)
++|++|++|||+.+|+.+|+++|+.++++.++....
T Consensus 188 --~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k 223 (229)
T 4dcc_A 188 --IDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWS 223 (229)
T ss_dssp --CCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGG
T ss_pred --CCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence 999999999999999999999999999998875443
No 60
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=99.80 E-value=5e-19 Score=130.29 Aligned_cols=126 Identities=13% Similarity=0.152 Sum_probs=105.4
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
....++||+.++|+.|+ .|++++++||+....+...+ +.+|+..+|+.++++. ||++..+..++++++
T Consensus 109 ~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~i~~~~--------kp~~~~~~~~~~~l~-- 176 (251)
T 2pke_A 109 HPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKI-EQSGLSDLFPRIEVVS--------EKDPQTYARVLSEFD-- 176 (251)
T ss_dssp CCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHH-HHHSGGGTCCCEEEES--------CCSHHHHHHHHHHHT--
T ss_pred ccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHH-HHcCcHHhCceeeeeC--------CCCHHHHHHHHHHhC--
Confidence 35788999999999999 89999999999877665555 4469999999888754 899999999999999
Q ss_pred CCCCceEEEecCH-hHHHHHHHcCCeEEEecCCCCCc----c--cccccch-hhCChhhhhhhhcC
Q psy6288 102 PQPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPTVPK----H--RTEAADL-VLNSLEEFKPELYG 159 (166)
Q Consensus 102 ~~~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~~~~~----~--~~~~~~~-~~~~~~~l~~~l~~ 159 (166)
+++++|++|||+. +|+.+|+++|+.++++.++.... + ....+++ +++++.++.++|..
T Consensus 177 ~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~l~~ 242 (251)
T 2pke_A 177 LPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAAVRA 242 (251)
T ss_dssp CCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGHHHHHHH
T ss_pred cCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHHHHHHHH
Confidence 9999999999999 99999999999999998875321 1 1346787 89999999887653
No 61
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=99.80 E-value=2.2e-19 Score=129.76 Aligned_cols=133 Identities=23% Similarity=0.438 Sum_probs=112.6
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccccc-ceEEecCCCCCccCC--CCChHHHHHHHHHcC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLF-HHVVLGSADPEVKQG--KPAPDVFLVAAKRFD 99 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~f-d~v~~~~~~~~~~~~--Kp~~~~~~~~~~~~~ 99 (166)
...++||+.++|+.|+. +++++||+....+...+ +.+|+..+| +.+++++ ..... ||++..++.+++++|
T Consensus 85 ~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l-~~~~l~~~~~~~~~~~~---~~~~~~~kpk~~~~~~~~~~l~ 157 (229)
T 2fdr_A 85 DVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMML-TKVGLKPYFAPHIYSAK---DLGADRVKPKPDIFLHGAAQFG 157 (229)
T ss_dssp HCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHH-HHTTCGGGTTTCEEEHH---HHCTTCCTTSSHHHHHHHHHHT
T ss_pred CCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHH-HhCChHHhccceEEecc---ccccCCCCcCHHHHHHHHHHcC
Confidence 46789999999998874 99999999877665555 446999999 9999998 77888 999999999999999
Q ss_pred CCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCC-----ccccc-ccchhhCChhhhhhhhcCCCCCC
Q psy6288 100 EKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVP-----KHRTE-AADLVLNSLEEFKPELYGLPPFE 164 (166)
Q Consensus 100 ~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~-----~~~~~-~~~~~~~~~~~l~~~l~~~~~~~ 164 (166)
+++++|++|||+.+|+.+|+++|+.++++.++... ..... .++++++++.++.+.|.+++.|.
T Consensus 158 --~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~~~ 226 (229)
T 2fdr_A 158 --VSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMAEWE 226 (229)
T ss_dssp --CCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHHHHTC--
T ss_pred --CChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999988643 11222 38999999999999888777664
No 62
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=99.80 E-value=2.1e-20 Score=135.43 Aligned_cols=122 Identities=17% Similarity=0.191 Sum_probs=95.0
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCC
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQ 103 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 103 (166)
..++||+.++|+.|+++|++++|+||+... +... .+.+|+..+|+.+++++ +....||+|.+|+.++++++ ++
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~-l~~~gl~~~f~~~~~~~---~~~~~Kp~~~~~~~~~~~~~--~~ 166 (220)
T 2zg6_A 94 AFLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTL-LEKFDLKKYFDALALSY---EIKAVKPNPKIFGFALAKVG--YP 166 (220)
T ss_dssp EEECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHH-HHHHTCGGGCSEEC--------------CCHHHHHHHHHC--SS
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHH-HHhcCcHhHeeEEEecc---ccCCCCCCHHHHHHHHHHcC--CC
Confidence 578999999999999999999999999764 5444 45579999999999999 88899999999999999999 77
Q ss_pred CCceEEEecCHh-HHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhhhhhcC
Q psy6288 104 PSKCLVFEDAPN-GVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 104 ~~~~i~IGD~~~-Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 159 (166)
+ +||||+.. |+.+|+++|+.++++.++....+. +.+++++.++.++|..
T Consensus 167 ~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~~~----~~~i~~l~el~~~l~~ 216 (220)
T 2zg6_A 167 A---VHVGDIYELDYIGAKRSYVDPILLDRYDFYPDV----RDRVKNLREALQKIEE 216 (220)
T ss_dssp E---EEEESSCCCCCCCSSSCSEEEEEBCTTSCCTTC----CSCBSSHHHHHHHHHH
T ss_pred e---EEEcCCchHhHHHHHHCCCeEEEECCCCCCCCc----ceEECCHHHHHHHHHH
Confidence 7 99999997 999999999999999876322111 5789999999887754
No 63
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=99.80 E-value=9.2e-19 Score=131.02 Aligned_cols=128 Identities=26% Similarity=0.326 Sum_probs=110.3
Q ss_pred cCCccchhHHHHHHHHHHC-CCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCC
Q psy6288 22 LGYNLAIGALRLINHLHKH-NIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDE 100 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 100 (166)
....++||+.++|+.|++. |++++++|++....+...+ +.+|+. +|+.+++++ +....||++..++.++++++
T Consensus 111 ~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l-~~~~l~-~f~~i~~~~---~~~~~kp~~~~~~~~~~~lg- 184 (275)
T 2qlt_A 111 EHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWF-DILKIK-RPEYFITAN---DVKQGKPHPEPYLKGRNGLG- 184 (275)
T ss_dssp TTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHH-HHHTCC-CCSSEECGG---GCSSCTTSSHHHHHHHHHTT-
T ss_pred cCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHH-HHcCCC-ccCEEEEcc---cCCCCCCChHHHHHHHHHcC-
Confidence 4567899999999999999 9999999999877775555 445776 488899988 78889999999999999999
Q ss_pred CC-------CCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcc-cccccchhhCChhhhhhh
Q psy6288 101 KP-------QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH-RTEAADLVLNSLEEFKPE 156 (166)
Q Consensus 101 ~~-------~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~-~~~~~~~~~~~~~~l~~~ 156 (166)
+ ++++|++|||+.+|+.+|+++|+.+++|.++....+ ....++++++++.++...
T Consensus 185 -i~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~~~ 247 (275)
T 2qlt_A 185 -FPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVG 247 (275)
T ss_dssp -CCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEEEC
T ss_pred -CCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHcChh
Confidence 8 999999999999999999999999999999865443 233689999999988653
No 64
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=99.79 E-value=4.3e-19 Score=127.14 Aligned_cols=104 Identities=16% Similarity=0.274 Sum_probs=94.7
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhh------cCcccccceEEecCCCCCccCCCCChHHHHHHHHH
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRH------KDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKR 97 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~------~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~ 97 (166)
..++||+.++|+.|++ |++++++||+....+.. +.+. +|+..+|+.+++++ .....||++..|+.++++
T Consensus 88 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~-~~~~l~~~~~~~l~~~f~~~~~~~---~~~~~Kp~~~~~~~~~~~ 162 (211)
T 2i6x_A 88 EEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDL-AMSPRFLPSGRTLDSFFDKVYASC---QMGKYKPNEDIFLEMIAD 162 (211)
T ss_dssp EEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHH-HTSTTSSTTCCCGGGGSSEEEEHH---HHTCCTTSHHHHHHHHHH
T ss_pred cccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHH-HHhhhccccccCHHHHcCeEEeec---ccCCCCCCHHHHHHHHHH
Confidence 4679999999999999 99999999998776644 4454 69999999999998 888999999999999999
Q ss_pred cCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCC
Q psy6288 98 FDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 98 ~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~ 134 (166)
++ +++++|++|||+.+|+.+|+++|+.++++.++.
T Consensus 163 ~~--~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~ 197 (211)
T 2i6x_A 163 SG--MKPEETLFIDDGPANVATAERLGFHTYCPDNGE 197 (211)
T ss_dssp HC--CCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred hC--CChHHeEEeCCCHHHHHHHHHcCCEEEEECCHH
Confidence 99 999999999999999999999999999998874
No 65
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=99.79 E-value=1e-19 Score=129.89 Aligned_cols=106 Identities=15% Similarity=0.298 Sum_probs=94.6
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCC
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQ 103 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 103 (166)
..++||+.++|+.|++.|++++++||++.......+...+|+..+|+.+++++ ..+..||++..+..++++++ ++
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~---~~~~~Kp~~~~~~~~~~~~~--~~ 164 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQ---DLGMRKPEARIYQHVLQAEG--FS 164 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHH---HHTCCTTCHHHHHHHHHHHT--CC
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEec---ccCCCCCCHHHHHHHHHHcC--CC
Confidence 57899999999999999999999999986655333333258889999999998 88899999999999999999 99
Q ss_pred CCceEEEecCHhHHHHHHHcCCeEEEecCCC
Q psy6288 104 PSKCLVFEDAPNGVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 104 ~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~ 134 (166)
+++|++|||+.+|+.+|+++|+.++++.++.
T Consensus 165 ~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~ 195 (206)
T 2b0c_A 165 PSDTVFFDDNADNIEGANQLGITSILVKDKT 195 (206)
T ss_dssp GGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred HHHeEEeCCCHHHHHHHHHcCCeEEEecCCc
Confidence 9999999999999999999999999998874
No 66
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=99.79 E-value=3.5e-19 Score=128.01 Aligned_cols=132 Identities=16% Similarity=0.158 Sum_probs=104.2
Q ss_pred hhhcCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCC-------CCCccCCCCChHHH
Q psy6288 19 GLLLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSA-------DPEVKQGKPAPDVF 91 (166)
Q Consensus 19 ~~~~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~-------~~~~~~~Kp~~~~~ 91 (166)
.......++||+.++|+.|++.|++++++||+....+...+ +.+|+..+|+.+++.+. ......+||++..|
T Consensus 69 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~ 147 (217)
T 3m1y_A 69 EVCESLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYR-DLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEML 147 (217)
T ss_dssp HHHTTCCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHH
T ss_pred HHHhcCcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHH-HHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHH
Confidence 34445789999999999999999999999999987775555 44699999998874430 00345689999999
Q ss_pred HHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhC--Chhhhhhhh
Q psy6288 92 LVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLN--SLEEFKPEL 157 (166)
Q Consensus 92 ~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~--~~~~l~~~l 157 (166)
+.++++++ +++++|++|||+.+|+.+|+++|+.+++ . ........++++++ +|.++.+++
T Consensus 148 ~~~~~~~g--~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~--~~~~l~~~ad~v~~~~dl~~~~~~~ 209 (217)
T 3m1y_A 148 LVLQRLLN--ISKTNTLVVGDGANDLSMFKHAHIKIAF--N--AKEVLKQHATHCINEPDLALIKPLI 209 (217)
T ss_dssp HHHHHHHT--CCSTTEEEEECSGGGHHHHTTCSEEEEE--S--CCHHHHTTCSEEECSSBGGGGTTC-
T ss_pred HHHHHHcC--CCHhHEEEEeCCHHHHHHHHHCCCeEEE--C--ccHHHHHhcceeecccCHHHHHHHh
Confidence 99999999 9999999999999999999999998876 2 22334466777764 566666654
No 67
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=99.78 E-value=1.2e-18 Score=123.68 Aligned_cols=102 Identities=15% Similarity=0.197 Sum_probs=89.9
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCc-hhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSA-KESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~-~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
..++||+.++|+.|++.|++++|+||++ ...+...+ +.+|+..+|+.++... +|++..|+.++++++ +
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l-~~~gl~~~f~~~~~~~--------~~k~~~~~~~~~~~~--~ 135 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLL-ELFDLFRYFVHREIYP--------GSKITHFERLQQKTG--I 135 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHH-HHTTCTTTEEEEEESS--------SCHHHHHHHHHHHHC--C
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHH-HHcCcHhhcceeEEEe--------CchHHHHHHHHHHcC--C
Confidence 5689999999999999999999999998 56665554 5579999998876544 467899999999999 9
Q ss_pred CCCceEEEecCHhHHHHHHHcCCeEEEecCCCCC
Q psy6288 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVP 136 (166)
Q Consensus 103 ~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~ 136 (166)
++++|+||||+.+|+.+|+++|+.++++.++...
T Consensus 136 ~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g~~~ 169 (187)
T 2wm8_A 136 PFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNL 169 (187)
T ss_dssp CGGGEEEEESCHHHHHHHHTTTCEEEECSSSCCH
T ss_pred ChHHEEEEeCCccChHHHHHcCCEEEEECCCCCh
Confidence 9999999999999999999999999999998643
No 68
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.77 E-value=1.9e-18 Score=138.68 Aligned_cols=109 Identities=17% Similarity=0.253 Sum_probs=93.1
Q ss_pred hcCCccchhHHHHHHHHHHCCCCEEEEeCC--chhhHHHHHhh-hcCcccccceEEecCCCCCccCCCCChHHHHHHHHH
Q psy6288 21 LLGYNLAIGALRLINHLHKHNIPFAIATSS--AKESFELKTSR-HKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKR 97 (166)
Q Consensus 21 ~~~~~~~~g~~~~l~~l~~~g~~i~ivS~~--~~~~~~~~l~~-~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~ 97 (166)
.....++||+.++|+.|+++|++++|+||+ ........+.. ..|+..+||.+++++ +++..||+|++|+.++++
T Consensus 96 ~~~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~---~~~~~KP~p~~~~~~~~~ 172 (555)
T 3i28_A 96 ISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESC---QVGMVKPEPQIYKFLLDT 172 (555)
T ss_dssp HHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHH---HHTCCTTCHHHHHHHHHH
T ss_pred HhhcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEecc---ccCCCCCCHHHHHHHHHH
Confidence 334789999999999999999999999998 11111122211 127889999999999 999999999999999999
Q ss_pred cCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCC
Q psy6288 98 FDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 98 ~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~ 134 (166)
+| ++|++|+||||+.+|+.+|+++|+.++++.++.
T Consensus 173 lg--~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~~ 207 (555)
T 3i28_A 173 LK--ASPSEVVFLDDIGANLKPARDLGMVTILVQDTD 207 (555)
T ss_dssp HT--CCGGGEEEEESCHHHHHHHHHHTCEEEECSSHH
T ss_pred cC--CChhHEEEECCcHHHHHHHHHcCCEEEEECCCc
Confidence 99 999999999999999999999999999998764
No 69
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=99.76 E-value=1.6e-19 Score=134.18 Aligned_cols=126 Identities=14% Similarity=0.142 Sum_probs=103.6
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhh--HHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKES--FELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDE 100 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~--~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 100 (166)
...++|++.++|+.|+ .|+++ |+||..... ....+....++..+|+.+++++ ....+||+|.+|+.++++++
T Consensus 124 ~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~---~~~~~KP~p~~~~~~~~~~~- 197 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTK---PVYIGKPKAIIMERAIAHLG- 197 (264)
T ss_dssp TTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCC---CEECSTTSHHHHHHHHHHHC-
T ss_pred CCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCC---ccccCCCCHHHHHHHHHHcC-
Confidence 4568999999999997 78987 889987532 1111223335778899998888 78889999999999999999
Q ss_pred CCCCCceEEEecCH-hHHHHHHHcCCeEEEecCCCCCcc-cc---cccchhhCChhhhhh
Q psy6288 101 KPQPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPTVPKH-RT---EAADLVLNSLEEFKP 155 (166)
Q Consensus 101 ~~~~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~~~~~~-~~---~~~~~~~~~~~~l~~ 155 (166)
+++++|+||||++ +|+.+|+++|+.+++|.+|....+ .. ..|+++++++.++..
T Consensus 198 -~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~~ 256 (264)
T 1yv9_A 198 -VEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWTF 256 (264)
T ss_dssp -SCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCCT
T ss_pred -CCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHhh
Confidence 9999999999995 999999999999999999875543 22 268999999998865
No 70
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=99.76 E-value=1.5e-17 Score=117.03 Aligned_cols=103 Identities=17% Similarity=0.213 Sum_probs=91.6
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
...++|++.++|+.|++.|++++++||... .+... .+.+|+..+|+.+++++ +....||++..++.++++++ +
T Consensus 80 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~-l~~~~~~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~~~--~ 152 (190)
T 2fi1_A 80 HPILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEI-LEKTSIAAYFTEVVTSS---SGFKRKPNPESMLYLREKYQ--I 152 (190)
T ss_dssp SCCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHH-HHHTTCGGGEEEEECGG---GCCCCTTSCHHHHHHHHHTT--C
T ss_pred cCccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHH-HHHcCCHhheeeeeecc---ccCCCCCCHHHHHHHHHHcC--C
Confidence 345899999999999999999999999874 34444 45579999999999998 88899999999999999999 7
Q ss_pred CCCceEEEecCHhHHHHHHHcCCeEEEecCCC
Q psy6288 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 103 ~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~ 134 (166)
+ +|++|||+.+|+.+|+++|+.++++.++.
T Consensus 153 ~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~ 182 (190)
T 2fi1_A 153 S--SGLVIGDRPIDIEAGQAAGLDTHLFTSIV 182 (190)
T ss_dssp S--SEEEEESSHHHHHHHHHTTCEEEECSCHH
T ss_pred C--eEEEEcCCHHHHHHHHHcCCeEEEECCCC
Confidence 7 99999999999999999999999998763
No 71
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=99.76 E-value=1.1e-18 Score=126.56 Aligned_cols=126 Identities=13% Similarity=0.202 Sum_probs=98.8
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcc--cccceEE--------ecCCCCCcc----CCCCCh
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTL--KLFHHVV--------LGSADPEVK----QGKPAP 88 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~--~~fd~v~--------~~~~~~~~~----~~Kp~~ 88 (166)
..+++||+.++|+.|+++|++++|+||+....+...+ +.+|+. .+|+.++ .+. +.. ..+|+|
T Consensus 84 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~~~f~~~~~~~~~~~~~~~---~~~~~~~~~~~Kp 159 (225)
T 1nnl_A 84 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA-SKLNIPATNVFANRLKFYFNGEYAGF---DETQPTAESGGKG 159 (225)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCCGGGEEEECEEECTTSCEEEE---CTTSGGGSTTHHH
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHH-HHcCCCcccEEeeeEEEcCCCcEecC---CCCCcccCCCchH
Confidence 3679999999999999999999999999987775554 557887 4787664 333 221 146778
Q ss_pred HHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhhhhh
Q psy6288 89 DVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPEL 157 (166)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~l 157 (166)
..++.++++++ + ++|+||||+.+|+.+|+++|+ ++++..+.........++++++++.++.++|
T Consensus 160 ~~~~~~~~~~~--~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (225)
T 1nnl_A 160 KVIKLLKEKFH--F--KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223 (225)
T ss_dssp HHHHHHHHHHC--C--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGGCC--
T ss_pred HHHHHHHHHcC--C--CcEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHHHHHH
Confidence 99999999999 6 799999999999999999999 8887554322233457899999999998765
No 72
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=99.76 E-value=1.6e-19 Score=135.68 Aligned_cols=120 Identities=16% Similarity=0.198 Sum_probs=99.9
Q ss_pred hhHHHHHHHHHHCCCCEEEEeCCchhhH--HH-HHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHc----CC
Q psy6288 28 IGALRLINHLHKHNIPFAIATSSAKESF--EL-KTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRF----DE 100 (166)
Q Consensus 28 ~g~~~~l~~l~~~g~~i~ivS~~~~~~~--~~-~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~----~~ 100 (166)
+...++++.|++.|++ +|+||.+.... .. .+....++..+|+.+++++ .....||+|.+|+.+++++ +
T Consensus 148 ~~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~---~~~~~KP~p~~~~~a~~~l~~~~~- 222 (284)
T 2hx1_A 148 HDLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRR---FIRFGKPDSQMFMFAYDMLRQKME- 222 (284)
T ss_dssp HHHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSC---EEEESTTSSHHHHHHHHHHHTTSC-
T ss_pred ccHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCc---eeEecCCCHHHHHHHHHHHhhccC-
Confidence 3666677789999999 99999976543 21 2224457889999999988 8889999999999999999 9
Q ss_pred CCCCCceEEEecCH-hHHHHHHHcCCeEEEecCCCCCcc-cc-------cccchhhCChhhh
Q psy6288 101 KPQPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPTVPKH-RT-------EAADLVLNSLEEF 153 (166)
Q Consensus 101 ~~~~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~~~~~~-~~-------~~~~~~~~~~~~l 153 (166)
++|++|+||||++ +|+.+|+++|+.+++|.+|..... .. ..|+++++++.++
T Consensus 223 -~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 223 -ISKREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp -CCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred -CCcceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 9999999999996 999999999999999999875543 22 4689999998876
No 73
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=99.75 E-value=4.1e-19 Score=132.30 Aligned_cols=127 Identities=17% Similarity=0.063 Sum_probs=103.9
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhH--HHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESF--ELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~--~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
..++|++.++++.|+ .|+++ ++||.+.... ...+....++..+|+.+++++ ....+||+|.+|+.++++
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~---~~~~~KP~~~~~~~~~~~---- 199 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVE---PIIIGKPNEPMYEVVREM---- 199 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCC---CEECSTTSHHHHHHHHHH----
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCC---ccEecCCCHHHHHHHHHh----
Confidence 567999999999999 79998 9999876432 111222146778899999888 788999999999999999
Q ss_pred CCCCceEEEecCH-hHHHHHHHcCCeEEEecCCCCCcc-cc---cccchhhCChhhhhhhhcC
Q psy6288 102 PQPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPTVPKH-RT---EAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 102 ~~~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~~~~~~-~~---~~~~~~~~~~~~l~~~l~~ 159 (166)
+++++|+||||++ +|+.+|+++|+.+++|.+|..... .. ..++++++++.++.++|.+
T Consensus 200 ~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~l~~ 262 (263)
T 1zjj_A 200 FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYLKT 262 (263)
T ss_dssp STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGGGC-
T ss_pred CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHHHhh
Confidence 3699999999997 999999999999999999865543 21 2689999999999988754
No 74
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=99.75 E-value=3.6e-19 Score=135.33 Aligned_cols=131 Identities=15% Similarity=0.131 Sum_probs=107.7
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhH-HH-HHhhhcC-cccccceEEecCCCCCccCCCCChHHHHHHHHHcCC
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESF-EL-KTSRHKD-TLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDE 100 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~-~~-~l~~~~g-l~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 100 (166)
..++|++.++++.|++.|+ ++++||...... .. .+....| +..+|+.+++++ ....+||++.+|+.++++++
T Consensus 155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~---~~~~~KP~~~~~~~~~~~lg- 229 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQ---ALVVGKPSPYMFECITENFS- 229 (306)
T ss_dssp TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCC---CEECSTTSTHHHHHHHHHSC-
T ss_pred CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCC---ceeeCCCCHHHHHHHHHHcC-
Confidence 4578999999999999899 999999975533 11 2223345 778888888888 78899999999999999999
Q ss_pred CCCCCceEEEecCH-hHHHHHHHcCCeEEEecCCCCCcc-c---------ccccchhhCChhhhhhhhcCC
Q psy6288 101 KPQPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPTVPKH-R---------TEAADLVLNSLEEFKPELYGL 160 (166)
Q Consensus 101 ~~~~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~~~~~~-~---------~~~~~~~~~~~~~l~~~l~~~ 160 (166)
+++++|+||||++ +|+.+|+++|+.+++|.+|..... . ...|+++++++.++..++.+-
T Consensus 230 -i~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l~~~ 299 (306)
T 2oyc_A 230 -IDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLEDE 299 (306)
T ss_dssp -CCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC---
T ss_pred -CChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHHHhh
Confidence 9999999999997 999999999999999999876543 1 247899999999999887653
No 75
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=99.75 E-value=5.3e-19 Score=130.49 Aligned_cols=126 Identities=17% Similarity=0.130 Sum_probs=105.4
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccc---eEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFH---HVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd---~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
.++|++.++++.|+ .|+++ ++||.........+ ...|+..+|+ .+++++ ....+||+|.+|+.+++++|
T Consensus 122 ~~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~Kp~~~~~~~~~~~lg-- 193 (259)
T 2ho4_A 122 FHYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDG-LALGPGPFVTALEYATDTK---AMVVGKPEKTFFLEALRDAD-- 193 (259)
T ss_dssp CBHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTE-EEECSHHHHHHHHHHHTCC---CEECSTTSHHHHHHHGGGGT--
T ss_pred CCHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCC-cccCCcHHHHHHHHHhCCC---ceEecCCCHHHHHHHHHHcC--
Confidence 37899999999999 89999 99998755443333 4468888887 566667 78889999999999999999
Q ss_pred CCCCceEEEecCH-hHHHHHHHcCCeEEEecCCCCC-ccc---ccccchhhCChhhhhhhhc
Q psy6288 102 PQPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPTVP-KHR---TEAADLVLNSLEEFKPELY 158 (166)
Q Consensus 102 ~~~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~~~~-~~~---~~~~~~~~~~~~~l~~~l~ 158 (166)
+++++|++|||+. +|+.+|+++|+.+++|.+|... .+. ...++++++++.++.+++.
T Consensus 194 i~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l~ 255 (259)
T 2ho4_A 194 CAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHIL 255 (259)
T ss_dssp CCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHHH
T ss_pred CChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHHH
Confidence 9999999999999 9999999999999999998432 221 3578999999999988775
No 76
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=99.74 E-value=4.6e-18 Score=130.21 Aligned_cols=133 Identities=11% Similarity=0.031 Sum_probs=103.7
Q ss_pred hhcCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCC-------CCCccCCCCChHHHH
Q psy6288 20 LLLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSA-------DPEVKQGKPAPDVFL 92 (166)
Q Consensus 20 ~~~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~-------~~~~~~~Kp~~~~~~ 92 (166)
+.....++||+.++|+.|+++|++++|+||+....+...+ +.+|+..+|+.++..+. ......+||++..+.
T Consensus 174 ~~~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l-~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~ 252 (317)
T 4eze_A 174 VCDRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLK-ARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLV 252 (317)
T ss_dssp HHHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHH
T ss_pred HHhCCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHH-HHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHH
Confidence 3446789999999999999999999999999987775555 55799999988765330 002445699999999
Q ss_pred HHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccc--cccchhhCChhhhhhhhcC
Q psy6288 93 VAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRT--EAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 93 ~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~ 159 (166)
.++++++ +++++|+||||+.+|+.+|+++|+.+++ . + ..... .......+++.++..+|..
T Consensus 253 ~~~~~lg--v~~~~~i~VGDs~~Di~aa~~AG~~va~-~-~--~~~~~~~a~~~i~~~~L~~ll~~L~~ 315 (317)
T 4eze_A 253 DLAARLN--IATENIIACGDGANDLPMLEHAGTGIAW-K-A--KPVVREKIHHQINYHGFELLLFLIED 315 (317)
T ss_dssp HHHHHHT--CCGGGEEEEECSGGGHHHHHHSSEEEEE-S-C--CHHHHHHCCEEESSSCGGGGGGGTCS
T ss_pred HHHHHcC--CCcceEEEEeCCHHHHHHHHHCCCeEEe-C-C--CHHHHHhcCeeeCCCCHHHHHHHHHh
Confidence 9999999 9999999999999999999999987666 2 2 22222 2333456788888887653
No 77
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=99.74 E-value=2.9e-18 Score=125.11 Aligned_cols=124 Identities=14% Similarity=0.059 Sum_probs=99.2
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
...++||+.++|+.|+++| +++|+||++...+...+ +.+|+..+|+.++... ..| +..+..+++ + +
T Consensus 94 ~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l-~~~gl~~~f~~~~~~~------~~K--~~~~~~~~~--~--~ 159 (231)
T 2p11_A 94 ASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKI-ARSGLWDEVEGRVLIY------IHK--ELMLDQVME--C--Y 159 (231)
T ss_dssp GGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHH-HHTTHHHHTTTCEEEE------SSG--GGCHHHHHH--H--S
T ss_pred hCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHH-HHcCcHHhcCeeEEec------CCh--HHHHHHHHh--c--C
Confidence 4678999999999999999 99999999987776555 4469999998765432 233 567777666 7 8
Q ss_pred CCCceEEEecCHh---HHHHHHHcCCeEEEecCCCC--Ccc-c-cc-ccchhhCChhhhhhhhcCC
Q psy6288 103 QPSKCLVFEDAPN---GVLGAKAAGMSCVMVPDPTV--PKH-R-TE-AADLVLNSLEEFKPELYGL 160 (166)
Q Consensus 103 ~~~~~i~IGD~~~---Di~~a~~~G~~~i~v~~~~~--~~~-~-~~-~~~~~~~~~~~l~~~l~~~ 160 (166)
+|++|+||||+.+ |+.+|+++|+.++++.++.. ..+ . .. .++++++++.++.++|...
T Consensus 160 ~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el~~~l~~~ 225 (231)
T 2p11_A 160 PARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDLVEMDAEW 225 (231)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGGGGCGGGG
T ss_pred CCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHHHHHHHHH
Confidence 8999999999998 99999999999999999843 222 2 22 3899999999998877643
No 78
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=99.72 E-value=1.6e-18 Score=126.96 Aligned_cols=125 Identities=10% Similarity=0.110 Sum_probs=100.0
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccC--------CCCChHH-HH-
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQ--------GKPAPDV-FL- 92 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~--------~Kp~~~~-~~- 92 (166)
...++||+.++|+.|+++|++++|+||+....+...+ + |+..+ +.+++++ .... .||+|.. +.
T Consensus 75 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l-~--~l~~~-~~v~~~~---~~~~~~~~~~~~~kp~p~~~~~~ 147 (236)
T 2fea_A 75 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLL-E--GIVEK-DRIYCNH---ASFDNDYIHIDWPHSCKGTCSNQ 147 (236)
T ss_dssp HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH-T--TTSCG-GGEEEEE---EECSSSBCEEECTTCCCTTCCSC
T ss_pred CCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHH-h--cCCCC-CeEEeee---eEEcCCceEEecCCCCccccccc
Confidence 4789999999999999999999999999977664444 4 77665 8888887 4443 7898884 54
Q ss_pred ------HHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCccc-cc-ccchhhCChhhhhhhhcC
Q psy6288 93 ------VAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHR-TE-AADLVLNSLEEFKPELYG 159 (166)
Q Consensus 93 ------~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~~-~~~~~~~~~~~l~~~l~~ 159 (166)
.++++++ +++++|+||||+.+|+.+|+++|+.++. ++. .... .. .++++++++.++.++|..
T Consensus 148 ~~~~K~~~~~~~~--~~~~~~~~vGDs~~Di~~a~~aG~~~~~--~~~-~~~~~~~~~~~~~~~~~~el~~~l~~ 217 (236)
T 2fea_A 148 CGCCKPSVIHELS--EPNQYIIMIGDSVTDVEAAKLSDLCFAR--DYL-LNECREQNLNHLPYQDFYEIRKEIEN 217 (236)
T ss_dssp CSSCHHHHHHHHC--CTTCEEEEEECCGGGHHHHHTCSEEEEC--HHH-HHHHHHTTCCEECCSSHHHHHHHHHT
T ss_pred cCCcHHHHHHHHh--ccCCeEEEEeCChHHHHHHHhCCeeeec--hHH-HHHHHHCCCCeeecCCHHHHHHHHHH
Confidence 8999999 9999999999999999999999998863 221 1111 22 278999999999888765
No 79
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=99.70 E-value=7.7e-17 Score=115.22 Aligned_cols=130 Identities=14% Similarity=0.088 Sum_probs=97.8
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCc--ccccceEEecCCCCC----ccCCCCChHHHHHHH-H
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDT--LKLFHHVVLGSADPE----VKQGKPAPDVFLVAA-K 96 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl--~~~fd~v~~~~~~~~----~~~~Kp~~~~~~~~~-~ 96 (166)
..++||+.++|+.|++.|++++|+||+....+...+ +.+|+ ..+|...+....+ . ....||.+..+...+ +
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 158 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFA-DYLNIPRENIFAVETIWNSD-GSFKELDNSNGACDSKLSAFDK 158 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCCGGGEEEEEEEECTT-SBEEEEECTTSTTTCHHHHHHH
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHH-HHcCCCcccEEEeeeeecCC-CceeccCCCCCCcccHHHHHHH
Confidence 568999999999999999999999999877775554 44688 4456532222101 2 245777776555555 5
Q ss_pred HcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcc--cccccchhhCChhhhhhhhc
Q psy6288 97 RFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH--RTEAADLVLNSLEEFKPELY 158 (166)
Q Consensus 97 ~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~--~~~~~~~~~~~~~~l~~~l~ 158 (166)
.++ +++++|++|||+.+|+.++ ++|+.++++..+..... ....++++++++.++.++|+
T Consensus 159 ~~~--~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l~ 219 (219)
T 3kd3_A 159 AKG--LIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLIM 219 (219)
T ss_dssp HGG--GCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHHC
T ss_pred HhC--CCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhhC
Confidence 569 9999999999999999998 68999888877643322 45678999999999998764
No 80
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=99.70 E-value=4.2e-18 Score=126.80 Aligned_cols=127 Identities=17% Similarity=0.145 Sum_probs=103.1
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHH--HHhhhcCcccccceEEecCCCCC-ccCCCCChHHHHHHHHHcCC
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFEL--KTSRHKDTLKLFHHVVLGSADPE-VKQGKPAPDVFLVAAKRFDE 100 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~--~l~~~~gl~~~fd~v~~~~~~~~-~~~~Kp~~~~~~~~~~~~~~ 100 (166)
..+++++.++++.| +.|+++ ++||........ .+.+..++..+|+.+++.+ . ...+||++.+|+.+++++|
T Consensus 136 ~~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~kpk~~~~~~~~~~lg- 209 (271)
T 1vjr_A 136 TLTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRK---PDLIAGKPNPLVVDVISEKFG- 209 (271)
T ss_dssp TCCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCC---CSEECSTTSTHHHHHHHHHHT-
T ss_pred CcCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCC---CcccCCCCCHHHHHHHHHHhC-
Confidence 45789999999999 778998 889886442211 1223335677888877777 7 8889999999999999999
Q ss_pred CCCCCceEEEecCH-hHHHHHHHcCCeEEEecCCCCCcc-cc---cccchhhCChhhhhhhh
Q psy6288 101 KPQPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPTVPKH-RT---EAADLVLNSLEEFKPEL 157 (166)
Q Consensus 101 ~~~~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~~~~~~-~~---~~~~~~~~~~~~l~~~l 157 (166)
+++++|++|||++ +|+.+|+.+|+.+++|.+|....+ .. ..++++++++.++.++|
T Consensus 210 -i~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 210 -VPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp -CCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred -CCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 9999999999995 999999999999999999875543 21 37899999999998765
No 81
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=99.70 E-value=3e-17 Score=117.34 Aligned_cols=127 Identities=14% Similarity=0.154 Sum_probs=100.1
Q ss_pred hcCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccccc-ceEEecCCCCCcc--C-CCCChHHHHHHHH
Q psy6288 21 LLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLF-HHVVLGSADPEVK--Q-GKPAPDVFLVAAK 96 (166)
Q Consensus 21 ~~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~f-d~v~~~~~~~~~~--~-~Kp~~~~~~~~~~ 96 (166)
.....++||+.++|+.|++. ++++|+||+....+...+ +.+|+..+| +.++.++ +.. . .+|+|..+..+++
T Consensus 65 ~~~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l-~~~gl~~~f~~~~~~~~---~~~~~~~~~p~p~~~~~~l~ 139 (206)
T 1rku_A 65 IATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDD---SDRVVGYQLRQKDPKRQSVI 139 (206)
T ss_dssp HTTCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHH-HHTTCCCEEEEEEEECT---TSCEEEEECCSSSHHHHHHH
T ss_pred HHhcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHH-HHcCCcceecceeEEcC---CceEEeeecCCCchHHHHHH
Confidence 34678899999999999999 999999999877665444 557999999 5666655 332 1 2488899999999
Q ss_pred HcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcc-cccccchh-hCChhhhhhhhc
Q psy6288 97 RFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKH-RTEAADLV-LNSLEEFKPELY 158 (166)
Q Consensus 97 ~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~-~~~~~~~~-~~~~~~l~~~l~ 158 (166)
+++ ..+++|+||||+.+|+.+|+++|+.++. . .... ....++++ ++++.++.+.|.
T Consensus 140 ~l~--~~~~~~~~iGD~~~Di~~a~~aG~~~~~-~---~~~~~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 140 AFK--SLYYRVIAAGDSYNDTTMLSEAHAGILF-H---APENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp HHH--HTTCEEEEEECSSTTHHHHHHSSEEEEE-S---CCHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred HHH--hcCCEEEEEeCChhhHHHHHhcCccEEE-C---CcHHHHHHHhhhccccchHHHHHHHH
Confidence 999 8899999999999999999999998663 2 1222 22345665 899999987765
No 82
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=99.69 E-value=4.5e-18 Score=123.98 Aligned_cols=126 Identities=16% Similarity=0.172 Sum_probs=103.7
Q ss_pred CCccchhHHHHHHHHHHCCCCEE---------------------------------EEeCCchhhHHHHHhhhcC-cccc
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFA---------------------------------IATSSAKESFELKTSRHKD-TLKL 68 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~---------------------------------ivS~~~~~~~~~~l~~~~g-l~~~ 68 (166)
...+++|+.++++.|++.|++++ ++|+.. .... .+.+.+| +..+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~-~~~~~~~~~~~~ 162 (250)
T 2c4n_A 85 KKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGR-GFYPACGALCAG 162 (250)
T ss_dssp CEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSS-TTCBCHHHHHHH
T ss_pred CEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCC-CeeecchHHHHH
Confidence 45678999999999999999998 888876 3332 2223345 6667
Q ss_pred cceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCCCceEEEecC-HhHHHHHHHcCCeEEEecCCCCCcc-cc---ccc
Q psy6288 69 FHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDA-PNGVLGAKAAGMSCVMVPDPTVPKH-RT---EAA 143 (166)
Q Consensus 69 fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~-~~Di~~a~~~G~~~i~v~~~~~~~~-~~---~~~ 143 (166)
|+.+.+.+ ....+||++.+++.+++++| +++++|++|||+ .+|+.+|+.+|+.+++|.+|....+ .. ..+
T Consensus 163 ~~~~~~~~---~~~~~kpk~~~~~~~~~~lg--i~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~ 237 (250)
T 2c4n_A 163 IEKISGRK---PFYVGKPSPWIIRAALNKMQ--AHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRP 237 (250)
T ss_dssp HHHHHCCC---CEECSTTSTHHHHHHHHHHT--CCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCC
T ss_pred HHHHhCCC---ceEeCCCCHHHHHHHHHHcC--CCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCC
Confidence 77777777 77889999999999999999 999999999999 6999999999999999999876543 22 578
Q ss_pred chhhCChhhhhh
Q psy6288 144 DLVLNSLEEFKP 155 (166)
Q Consensus 144 ~~~~~~~~~l~~ 155 (166)
+++++++.++.+
T Consensus 238 ~~v~~~~~el~~ 249 (250)
T 2c4n_A 238 SWIYPSVAEIDV 249 (250)
T ss_dssp SEEESSGGGCCC
T ss_pred CEEECCHHHhhc
Confidence 999999998754
No 83
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=99.69 E-value=1.3e-16 Score=120.95 Aligned_cols=101 Identities=9% Similarity=-0.050 Sum_probs=84.7
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhh---HHHHHhhh--------cCcccccceEEecCCCCCccCCCCChHHHH
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKES---FELKTSRH--------KDTLKLFHHVVLGSADPEVKQGKPAPDVFL 92 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~---~~~~l~~~--------~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~ 92 (166)
..++||+.++|+.|+++|++++|+||.+... ....+ +. +|+ +|+.+++++ +. ..||+|..+.
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l-~~~~~~~~~~~~~--~~~~~~~~~---~~-~~kp~p~~~~ 259 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYY-RMTRKWVEDIAGV--PLVMQCQRE---QG-DTRKDDVVKE 259 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHH-HHHHHHHHHTTCC--CCSEEEECC---TT-CCSCHHHHHH
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHH-HhcccccccccCC--Cchheeecc---CC-CCcHHHHHHH
Confidence 4579999999999999999999999997542 22233 33 588 589988877 44 4699999999
Q ss_pred HHHHHcCCCCCCCc-eEEEecCHhHHHHHHHcCCeEEEecCC
Q psy6288 93 VAAKRFDEKPQPSK-CLVFEDAPNGVLGAKAAGMSCVMVPDP 133 (166)
Q Consensus 93 ~~~~~~~~~~~~~~-~i~IGD~~~Di~~a~~~G~~~i~v~~~ 133 (166)
.++++++ .++.+ |+||||+..|+.+|+++|+.+++|.||
T Consensus 260 ~~~~~~~--~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 260 EIFWKHI--APHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp HHHHHHT--TTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HHHHHHh--ccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 9999998 66644 799999999999999999999999998
No 84
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=99.67 E-value=3.7e-17 Score=118.42 Aligned_cols=103 Identities=13% Similarity=0.073 Sum_probs=82.4
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCC
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQP 104 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 104 (166)
.++|++.++|+.|+++|++++|+||+........+ +. +.++|+.++.+.........||+|..|..++++++ +
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l-~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g--~-- 160 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVS-KT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKN--I-- 160 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHH-HH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTT--E--
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCC--C--
Confidence 46789999999999999999999999866443333 32 56778776432200024558999999999999999 7
Q ss_pred CceEEEecCHhHHHHHHHcCCeEEEecCCCCC
Q psy6288 105 SKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVP 136 (166)
Q Consensus 105 ~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~ 136 (166)
|+||||+.+|+.+|+++|+.++++.++...
T Consensus 161 --~l~VGDs~~Di~aA~~aG~~~i~v~~g~~~ 190 (211)
T 2b82_A 161 --RIFYGDSDNDITAARDVGARGIRILRASNS 190 (211)
T ss_dssp --EEEEESSHHHHHHHHHTTCEEEECCCCTTC
T ss_pred --EEEEECCHHHHHHHHHCCCeEEEEecCCCC
Confidence 999999999999999999999999998643
No 85
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=99.65 E-value=2.7e-16 Score=120.93 Aligned_cols=132 Identities=15% Similarity=0.097 Sum_probs=98.5
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecC-------CCCCccCCCCChHHHHHH
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGS-------ADPEVKQGKPAPDVFLVA 94 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~-------~~~~~~~~Kp~~~~~~~~ 94 (166)
...+++||+.++|+.|++.|++++++||+....+... .+.+|+..+|+..+... .......+||++..++.+
T Consensus 175 ~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~-~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~ 253 (335)
T 3n28_A 175 ETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYL-KEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTL 253 (335)
T ss_dssp TTCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHH-HHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHH
T ss_pred HhCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHH-HHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHH
Confidence 3568999999999999999999999999987766444 45579988887653221 000355679999999999
Q ss_pred HHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhhhhhc
Q psy6288 95 AKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPELY 158 (166)
Q Consensus 95 ~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 158 (166)
+++++ +++++|++|||+.+|+.+|+.+|+..++ .+..............+++.++...|.
T Consensus 254 ~~~lg--i~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~ 313 (335)
T 3n28_A 254 AQQYD--VEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILS 313 (335)
T ss_dssp HHHHT--CCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHH
T ss_pred HHHcC--CChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHH
Confidence 99999 9999999999999999999999998776 221111122222335667777766653
No 86
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=99.65 E-value=4.2e-16 Score=107.82 Aligned_cols=124 Identities=11% Similarity=0.138 Sum_probs=94.1
Q ss_pred HHHHhhhhhhhcCC------------ccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCC
Q psy6288 11 THVIFDMDGLLLGY------------NLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSAD 78 (166)
Q Consensus 11 ~~~~~~~~~~~~~~------------~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~ 78 (166)
+.++.|+++.+... .+.|+..++|+.|++.|++++|+||++...+...+ +.+|+..+|+.
T Consensus 10 k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~~~~------- 81 (162)
T 2p9j_A 10 KLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRL-KELGVEEIYTG------- 81 (162)
T ss_dssp CEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHH-HHTTCCEEEEC-------
T ss_pred eEEEEecCcceECCceeecCCCceeeeecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHH-HHcCCHhhccC-------
Confidence 33555666655531 23567889999999999999999999987775555 55688776631
Q ss_pred CCccCCCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhh
Q psy6288 79 PEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEE 152 (166)
Q Consensus 79 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 152 (166)
.||++..++.++++++ +++++|+||||+.+|+.+|+++|+.++.. ++ .......++++++++.+
T Consensus 82 -----~kp~~~~~~~~~~~~~--~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~--~~~~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 82 -----SYKKLEIYEKIKEKYS--LKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NA--VEEVRKVAVYITQRNGG 145 (162)
T ss_dssp -----C--CHHHHHHHHHHTT--CCGGGEEEEECSGGGHHHHHHSSEEEECT-TS--CHHHHHHCSEECSSCSS
T ss_pred -----CCCCHHHHHHHHHHcC--CCHHHEEEECCCHHHHHHHHHCCCeEEec-Cc--cHHHHhhCCEEecCCCC
Confidence 5899999999999999 99999999999999999999999986643 33 22334467888888654
No 87
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=99.64 E-value=2.1e-16 Score=124.88 Aligned_cols=129 Identities=14% Similarity=0.069 Sum_probs=98.4
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEE-------ecCCCCCccCCCCChHHHHHH
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVV-------LGSADPEVKQGKPAPDVFLVA 94 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~-------~~~~~~~~~~~Kp~~~~~~~~ 94 (166)
....++||+.++|+.|++.|++++|+||+....+... .+.+|+..+|+..+ ++...+....+||++..|+.+
T Consensus 253 ~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~-~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~ 331 (415)
T 3p96_A 253 GQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPL-AEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREF 331 (415)
T ss_dssp HHCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHH-HHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred HhCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHH-HHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHH
Confidence 3568999999999999999999999999997777544 45579988876543 221111344579999999999
Q ss_pred HHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchh--hCChhhhhhhh
Q psy6288 95 AKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLV--LNSLEEFKPEL 157 (166)
Q Consensus 95 ~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~--~~~~~~l~~~l 157 (166)
+++++ +++++|+||||+.+|+.+|+++|+.+++ .+ .......++++ ..++.++..++
T Consensus 332 ~~~~g--i~~~~~i~vGD~~~Di~~a~~aG~~va~--~~--~~~~~~~ad~~i~~~~l~~ll~~l 390 (415)
T 3p96_A 332 AQRAG--VPMAQTVAVGDGANDIDMLAAAGLGIAF--NA--KPALREVADASLSHPYLDTVLFLL 390 (415)
T ss_dssp HHHHT--CCGGGEEEEECSGGGHHHHHHSSEEEEE--SC--CHHHHHHCSEEECSSCTTHHHHHT
T ss_pred HHHcC--cChhhEEEEECCHHHHHHHHHCCCeEEE--CC--CHHHHHhCCEEEccCCHHHHHHHh
Confidence 99999 9999999999999999999999998776 22 22233445554 44666666544
No 88
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=99.64 E-value=1.1e-15 Score=108.81 Aligned_cols=129 Identities=16% Similarity=0.106 Sum_probs=96.7
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCC-------CCccCCCCChHHHHHH
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSAD-------PEVKQGKPAPDVFLVA 94 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~-------~~~~~~Kp~~~~~~~~ 94 (166)
....+.|++.++|+.|+++|++++++|++....+... .+.+|+..+|+.++..... .+....++++..+..+
T Consensus 73 ~~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~ 151 (211)
T 1l7m_A 73 KRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKI-KEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKI 151 (211)
T ss_dssp HTCCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHH-HHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHH
T ss_pred HhCCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHH-HHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHH
Confidence 3567889999999999999999999999886665444 4446887777654432200 0012245678999999
Q ss_pred HHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCC--hhhhhhhh
Q psy6288 95 AKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNS--LEEFKPEL 157 (166)
Q Consensus 95 ~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~--~~~l~~~l 157 (166)
+++++ +++++|++|||+.+|+.+|+.+|+.. ++. + .......+++++.+ +.++.+++
T Consensus 152 ~~~lg--i~~~~~~~iGD~~~Di~~~~~ag~~~-~~~-~--~~~~~~~a~~v~~~~~~~~l~~~l 210 (211)
T 1l7m_A 152 AKIEG--INLEDTVAVGDGANDISMFKKAGLKI-AFC-A--KPILKEKADICIEKRDLREILKYI 210 (211)
T ss_dssp HHHHT--CCGGGEEEEECSGGGHHHHHHCSEEE-EES-C--CHHHHTTCSEEECSSCGGGGGGGC
T ss_pred HHHcC--CCHHHEEEEecChhHHHHHHHCCCEE-EEC-C--CHHHHhhcceeecchhHHHHHHhh
Confidence 99999 99999999999999999999999974 343 1 22334568888888 88887654
No 89
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=99.64 E-value=5.9e-17 Score=115.57 Aligned_cols=131 Identities=15% Similarity=0.147 Sum_probs=98.6
Q ss_pred HHHHhhhhhhhcCCcc-----chhHHHH-------HHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCC
Q psy6288 11 THVIFDMDGLLLGYNL-----AIGALRL-------INHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSAD 78 (166)
Q Consensus 11 ~~~~~~~~~~~~~~~~-----~~g~~~~-------l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~ 78 (166)
+.++.|+++.+..... .+.+.++ |+.|++.|++++|+||++...+...+ +.+|+..+|+.
T Consensus 20 k~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~~~ivTn~~~~~~~~~l-~~lgl~~~~~~------- 91 (191)
T 3n1u_A 20 KCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMAAGIQVAIITTAQNAVVDHRM-EQLGITHYYKG------- 91 (191)
T ss_dssp SEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHHHHTTCEEEEECSCCSHHHHHHH-HHHTCCEEECS-------
T ss_pred CEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHHHHCCCeEEEEeCcChHHHHHHH-HHcCCccceeC-------
Confidence 3355566766554211 1445566 99999999999999999988776655 44688776632
Q ss_pred CCccCCCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCC------hhh
Q psy6288 79 PEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNS------LEE 152 (166)
Q Consensus 79 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~------~~~ 152 (166)
.||++..++.++++++ +++++|+||||+.+|+.+++.+|+.++ +..+ .......+++++.+ +.+
T Consensus 92 -----~kpk~~~~~~~~~~~~--~~~~~~~~vGD~~~Di~~~~~ag~~~~-~~~~--~~~~~~~ad~v~~~~~~~g~~~~ 161 (191)
T 3n1u_A 92 -----QVDKRSAYQHLKKTLG--LNDDEFAYIGDDLPDLPLIQQVGLGVA-VSNA--VPQVLEFADWRTERTGGRGAVRE 161 (191)
T ss_dssp -----CSSCHHHHHHHHHHHT--CCGGGEEEEECSGGGHHHHHHSSEEEE-CTTC--CHHHHHHSSEECSSCTTTTHHHH
T ss_pred -----CCChHHHHHHHHHHhC--CCHHHEEEECCCHHHHHHHHHCCCEEE-eCCc--cHHHHHhCCEEecCCCCCcHHHH
Confidence 2899999999999999 999999999999999999999999863 3322 23345567788777 667
Q ss_pred hhhhhcC
Q psy6288 153 FKPELYG 159 (166)
Q Consensus 153 l~~~l~~ 159 (166)
+.++++.
T Consensus 162 l~~~ll~ 168 (191)
T 3n1u_A 162 LCDLILN 168 (191)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777653
No 90
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=99.63 E-value=2.4e-15 Score=111.74 Aligned_cols=76 Identities=25% Similarity=0.295 Sum_probs=67.2
Q ss_pred ccCCCCChHHHHHHHHHcCCCCCCCceEEEecCH-hHHHHHHHcCCeEEEecCCCCCccccc--------ccchhhCChh
Q psy6288 81 VKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPTVPKHRTE--------AADLVLNSLE 151 (166)
Q Consensus 81 ~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~--------~~~~~~~~~~ 151 (166)
...+||++.+++.++++++ ++++++++|||++ +|+.+|+++|+.+++|.+|....+... .|+++++++.
T Consensus 183 ~~~~kp~~~~~~~~~~~~~--~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~ 260 (268)
T 3qgm_A 183 VVVGKPSEVIMREALDILG--LDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLK 260 (268)
T ss_dssp EECSTTSHHHHHHHHHHHT--CCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHH
T ss_pred eecCCCCHHHHHHHHHHhC--CCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHH
Confidence 5568999999999999999 9999999999995 999999999999999999976654322 7899999999
Q ss_pred hhhhhhc
Q psy6288 152 EFKPELY 158 (166)
Q Consensus 152 ~l~~~l~ 158 (166)
++.++|.
T Consensus 261 el~~~l~ 267 (268)
T 3qgm_A 261 DMVEALE 267 (268)
T ss_dssp HHHHTC-
T ss_pred HHHHHHh
Confidence 9998764
No 91
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=99.62 E-value=2e-15 Score=119.48 Aligned_cols=100 Identities=14% Similarity=0.084 Sum_probs=84.4
Q ss_pred cchhHHHHHHHHHHCCCCEEEEeCCch------------hhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHH
Q psy6288 26 LAIGALRLINHLHKHNIPFAIATSSAK------------ESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLV 93 (166)
Q Consensus 26 ~~~g~~~~l~~l~~~g~~i~ivS~~~~------------~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~ 93 (166)
++||+.++|+.|+++|++++|+||++. ..+ ..+++.+|+ +|+.+++++ ++...||+|.+|..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~-~~~l~~lgl--~fd~i~~~~---~~~~~KP~p~~~~~ 161 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKV-EAVLEKLGV--PFQVLVATH---AGLNRKPVSGMWDH 161 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHH-HHHHHHHTS--CCEEEEECS---SSTTSTTSSHHHHH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHH-HHHHHHcCC--CEEEEEECC---CCCCCCCCHHHHHH
Confidence 799999999999999999999999761 113 233445677 389999999 89999999999999
Q ss_pred HHHHcCC--CCCCCceEEEecCH-----------------hHHHHHHHcCCeEEEec
Q psy6288 94 AAKRFDE--KPQPSKCLVFEDAP-----------------NGVLGAKAAGMSCVMVP 131 (166)
Q Consensus 94 ~~~~~~~--~~~~~~~i~IGD~~-----------------~Di~~a~~~G~~~i~v~ 131 (166)
++++++. .+++++|+||||+. .|+.+|+++|+..+...
T Consensus 162 a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~pe 218 (416)
T 3zvl_A 162 LQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATPE 218 (416)
T ss_dssp HHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECHH
T ss_pred HHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCcH
Confidence 9999951 17899999999997 89999999999987543
No 92
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=99.61 E-value=8.3e-16 Score=108.65 Aligned_cols=129 Identities=16% Similarity=0.107 Sum_probs=99.3
Q ss_pred hhhhcCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHH
Q psy6288 18 DGLLLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKR 97 (166)
Q Consensus 18 ~~~~~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~ 97 (166)
........++||+.++|+.|++.|++++++||+....+. .+ +.+|+..+++.+...+. .....+|.+.....++++
T Consensus 72 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~-~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~k~~~l~~ 147 (201)
T 4ap9_A 72 LRTREKVNVSPEARELVETLREKGFKVVLISGSFEEVLE-PF-KELGDEFMANRAIFEDG--KFQGIRLRFRDKGEFLKR 147 (201)
T ss_dssp HHGGGGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSG-GG-TTTSSEEEEEEEEEETT--EEEEEECCSSCHHHHHGG
T ss_pred HHHHHhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHH-HH-HHcCchhheeeEEeeCC--ceECCcCCccCHHHHHHh
Confidence 334455789999999999999999999999999876664 44 66788888666655541 122245555556667777
Q ss_pred cCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhhhhhcCCC
Q psy6288 98 FDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPELYGLP 161 (166)
Q Consensus 98 ~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 161 (166)
+ ++++|++|||+.+|+.+|+.+|+. +++..+.. .++++++++.++.++|..+.
T Consensus 148 l----~~~~~i~iGD~~~Di~~~~~ag~~-v~~~~~~~------~ad~v~~~~~el~~~l~~l~ 200 (201)
T 4ap9_A 148 F----RDGFILAMGDGYADAKMFERADMG-IAVGREIP------GADLLVKDLKELVDFIKNLK 200 (201)
T ss_dssp G----TTSCEEEEECTTCCHHHHHHCSEE-EEESSCCT------TCSEEESSHHHHHHHHHTCC
T ss_pred c----CcCcEEEEeCCHHHHHHHHhCCce-EEECCCCc------cccEEEccHHHHHHHHHHhh
Confidence 6 499999999999999999999997 56655532 78999999999999887653
No 93
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=99.61 E-value=1.1e-15 Score=105.85 Aligned_cols=108 Identities=17% Similarity=0.135 Sum_probs=88.4
Q ss_pred HHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCCCceEEEec
Q psy6288 33 LINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFED 112 (166)
Q Consensus 33 ~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD 112 (166)
+|+.|++.|++++++||+....+...+ +.+|+..+|+. .||++..++.++++++ +++++|+||||
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~-~~~gl~~~~~~------------~kpk~~~~~~~~~~~~--~~~~~~~~vGD 103 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRA-EKLKVDYLFQG------------VVDKLSAAEELCNELG--INLEQVAYIGD 103 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHH-HHTTCSEEECS------------CSCHHHHHHHHHHHHT--CCGGGEEEECC
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHH-HHcCCCEeecc------------cCChHHHHHHHHHHcC--CCHHHEEEECC
Confidence 599999999999999999988775555 55788777632 3999999999999999 99999999999
Q ss_pred CHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCC------hhhhhhhhc
Q psy6288 113 APNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNS------LEEFKPELY 158 (166)
Q Consensus 113 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~------~~~l~~~l~ 158 (166)
+.+|+.+|+++|+.++... ........+++++.+ +.++.+.++
T Consensus 104 ~~~Di~~~~~ag~~~~~~~---~~~~~~~~ad~v~~~~~~~g~~~e~~~~ll 152 (164)
T 3e8m_A 104 DLNDAKLLKRVGIAGVPAS---APFYIRRLSTIFLEKRGGEGVFREFVEKVL 152 (164)
T ss_dssp SGGGHHHHTTSSEEECCTT---SCHHHHTTCSSCCCCCTTTTHHHHHHHHHT
T ss_pred CHHHHHHHHHCCCeEEcCC---hHHHHHHhCcEEeccCCCCcHHHHHHHHHH
Confidence 9999999999999766432 223345567888877 778887776
No 94
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=99.60 E-value=6.6e-15 Score=109.44 Aligned_cols=74 Identities=16% Similarity=0.227 Sum_probs=64.9
Q ss_pred CccCCCCChHHHHHHHHHcCCCCCCCceEEEecC-HhHHHHHHHcCCeEEEecCCCCCccccc----ccchhhCChhhhh
Q psy6288 80 EVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDA-PNGVLGAKAAGMSCVMVPDPTVPKHRTE----AADLVLNSLEEFK 154 (166)
Q Consensus 80 ~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~-~~Di~~a~~~G~~~i~v~~~~~~~~~~~----~~~~~~~~~~~l~ 154 (166)
....+||++.+++.++++++ ++++++++|||+ .+|+.+|+++|+.+++|.+|....+... .|+++++++.+|.
T Consensus 177 ~~~~~Kp~~~~~~~~~~~~~--~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l~ 254 (264)
T 3epr_A 177 PVFIGKPNAIIMNKALEILN--IPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWT 254 (264)
T ss_dssp CEECSTTSHHHHHHHHHHHT--SCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGCC
T ss_pred cccCCCCCHHHHHHHHHHhC--cCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHh
Confidence 34568999999999999999 999999999999 5999999999999999999976655222 7899999999876
Q ss_pred h
Q psy6288 155 P 155 (166)
Q Consensus 155 ~ 155 (166)
+
T Consensus 255 ~ 255 (264)
T 3epr_A 255 F 255 (264)
T ss_dssp S
T ss_pred c
Confidence 4
No 95
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=99.58 E-value=1.3e-15 Score=112.51 Aligned_cols=127 Identities=17% Similarity=0.117 Sum_probs=94.3
Q ss_pred cchhHHHHHHHHHHC-CCCEEEEeCCchhhHHHHHhhhcCcccccc---eEEecCCCCCccCCCCChHHHHHHHHHcCCC
Q psy6288 26 LAIGALRLINHLHKH-NIPFAIATSSAKESFELKTSRHKDTLKLFH---HVVLGSADPEVKQGKPAPDVFLVAAKRFDEK 101 (166)
Q Consensus 26 ~~~g~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd---~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 101 (166)
.++++.+.++.|++. |+++ ++|+......... ....++..+|+ ...+.+ ....+||++.+|+.+++++|
T Consensus 132 ~~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~kpk~~~~~~~~~~lg-- 204 (271)
T 2x4d_A 132 SYQNMNNAFQVLMELEKPVL-ISLGKGRYYAATS-GLMLDVGPYMKALEYACGIK---AEVVGKPSPEFFKSALQAIG-- 204 (271)
T ss_dssp CHHHHHHHHHHHHHCSSCCE-EEECCCSEEEETT-EEEECHHHHHHHHHHHHTCC---CEEESTTCHHHHHHHHHHHT--
T ss_pred CHHHHHHHHHHHHhcCCCeE-EEEcCCcccccCC-CcccChhHHHHHHHHHhCCc---eeeccCCCHHHHHHHHHHhC--
Confidence 366788888888887 8887 6666543322111 12234444443 233344 56778999999999999999
Q ss_pred CCCCceEEEecCH-hHHHHHHHcCCeEEEecCCCCC-cc-c--ccccchhhCChhhhhhhhcC
Q psy6288 102 PQPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPTVP-KH-R--TEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 102 ~~~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~~~~-~~-~--~~~~~~~~~~~~~l~~~l~~ 159 (166)
+++++|++|||+. +|+.+|+.+|+.+++|.++... .. . ...++++++++.++.++|.+
T Consensus 205 i~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 267 (271)
T 2x4d_A 205 VEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQ 267 (271)
T ss_dssp CCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHHHH
T ss_pred CCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHHHh
Confidence 9999999999999 9999999999999999998433 22 2 24589999999999887754
No 96
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=99.56 E-value=1.1e-14 Score=109.66 Aligned_cols=117 Identities=16% Similarity=0.148 Sum_probs=92.9
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
...++||+.++|+.|++.|++++|+||+....+...+ +.+|+..+|+.++. + ....++++++ .
T Consensus 161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~f~~i~~----------~----~K~~~~~~l~--~ 223 (287)
T 3a1c_A 161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS-RELNLDLVIAEVLP----------H----QKSEEVKKLQ--A 223 (287)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCSEEECSCCT----------T----CHHHHHHHHT--T
T ss_pred ccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhCCceeeeecCh----------H----HHHHHHHHHh--c
Confidence 4579999999999999999999999999988775555 45699888865531 1 1277889999 7
Q ss_pred CCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhh--CChhhhhhhhcCC
Q psy6288 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVL--NSLEEFKPELYGL 160 (166)
Q Consensus 103 ~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~ 160 (166)
. ++|+||||+.+|+.+|+++|+. +.+..+ .......+++++ +++.++..+|..-
T Consensus 224 ~-~~~~~vGDs~~Di~~a~~ag~~-v~~~~~--~~~~~~~ad~v~~~~~~~~l~~~l~~~ 279 (287)
T 3a1c_A 224 K-EVVAFVGDGINDAPALAQADLG-IAVGSG--SDVAVESGDIVLIRDDLRDVVAAIQLS 279 (287)
T ss_dssp T-CCEEEEECTTTCHHHHHHSSEE-EEECCC--SCCSSCCSSEEESSSCTHHHHHHHHTT
T ss_pred C-CeEEEEECCHHHHHHHHHCCee-EEeCCC--CHHHHhhCCEEEeCCCHHHHHHHHHHH
Confidence 7 9999999999999999999997 444432 223345788999 9999998877643
No 97
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=99.55 E-value=8.6e-16 Score=109.95 Aligned_cols=131 Identities=12% Similarity=0.106 Sum_probs=95.8
Q ss_pred HHHHhhhhhhhcCCc-----cchhHHHH-------HHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCC
Q psy6288 11 THVIFDMDGLLLGYN-----LAIGALRL-------INHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSAD 78 (166)
Q Consensus 11 ~~~~~~~~~~~~~~~-----~~~g~~~~-------l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~ 78 (166)
+.++.|+++.+.... ..+.+.++ |+.|++.|++++|+||+....+...+ +.+|+..+|+.
T Consensus 26 k~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~~~~~~l-~~lgi~~~~~~------- 97 (195)
T 3n07_A 26 KLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNAGIEIAIITGRRSQIVENRM-KALGISLIYQG------- 97 (195)
T ss_dssp CEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHH-HHTTCCEEECS-------
T ss_pred CEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHHCCCEEEEEECcCHHHHHHHH-HHcCCcEEeeC-------
Confidence 345566676554311 12344455 99999999999999999988775555 55788776621
Q ss_pred CCccCCCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCC------hhh
Q psy6288 79 PEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNS------LEE 152 (166)
Q Consensus 79 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~------~~~ 152 (166)
.||++..++.++++++ +++++|++|||+.+|+.+++++|+..+. .. ........+++++.+ +.+
T Consensus 98 -----~k~k~~~~~~~~~~~~--~~~~~~~~vGD~~nDi~~~~~ag~~va~-~n--a~~~~~~~ad~v~~~~~~~G~~~~ 167 (195)
T 3n07_A 98 -----QDDKVQAYYDICQKLA--IAPEQTGYIGDDLIDWPVMEKVALRVCV-AD--GHPLLAQRANYVTHIKGGHGAVRE 167 (195)
T ss_dssp -----CSSHHHHHHHHHHHHC--CCGGGEEEEESSGGGHHHHTTSSEEEEC-TT--SCHHHHHHCSEECSSCTTTTHHHH
T ss_pred -----CCCcHHHHHHHHHHhC--CCHHHEEEEcCCHHHHHHHHHCCCEEEE-CC--hHHHHHHhCCEEEcCCCCCCHHHH
Confidence 2899999999999999 9999999999999999999999987543 22 223344566777665 456
Q ss_pred hhhhhcC
Q psy6288 153 FKPELYG 159 (166)
Q Consensus 153 l~~~l~~ 159 (166)
+.++++.
T Consensus 168 ~~~~il~ 174 (195)
T 3n07_A 168 VCDLILQ 174 (195)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666653
No 98
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=99.32 E-value=3.4e-16 Score=116.82 Aligned_cols=116 Identities=12% Similarity=0.164 Sum_probs=92.8
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
...++||+.++|+.|++.|++++++||+....+...+ +.+|+..+|+.++ |..+..++++++ .
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~~gl~~~f~~~~--------------p~~k~~~~~~l~--~ 196 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELS-KELNIQEYYSNLS--------------PEDKVRIIEKLK--Q 196 (263)
Confidence 3578999999999999999999999999877775444 5579988886664 233577889999 8
Q ss_pred CCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhh--CChhhhhhhhc
Q psy6288 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVL--NSLEEFKPELY 158 (166)
Q Consensus 103 ~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~~~~l~~~l~ 158 (166)
++++|+||||+.+|+.+++++|+. +.++.........+++++ +++.++...+.
T Consensus 197 ~~~~~~~VGD~~~D~~aa~~Agv~---va~g~~~~~~~~~ad~v~~~~~l~~l~~~l~ 251 (263)
T 2yj3_A 197 NGNKVLMIGDGVNDAAALALADVS---VAMGNGVDISKNVADIILVSNDIGTLLGLIK 251 (263)
Confidence 899999999999999999999964 445533333456788988 99999877653
No 99
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=99.54 E-value=2.2e-14 Score=101.04 Aligned_cols=107 Identities=15% Similarity=0.107 Sum_probs=86.0
Q ss_pred cchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCCC
Q psy6288 26 LAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPS 105 (166)
Q Consensus 26 ~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 105 (166)
+.+...++|+.|+++|++++++||.+...+...+ +.+|+..+|+ ..||++..++.++++++ ++++
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~-~~lgl~~~~~------------~~k~k~~~~~~~~~~~~--~~~~ 100 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRI-ADLGIKLFFL------------GKLEKETACFDLMKQAG--VTAE 100 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHH-HHHTCCEEEE------------SCSCHHHHHHHHHHHHT--CCGG
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHH-HHcCCceeec------------CCCCcHHHHHHHHHHcC--CCHH
Confidence 4567889999999999999999999987775555 4468877662 14889999999999999 9999
Q ss_pred ceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCCh
Q psy6288 106 KCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSL 150 (166)
Q Consensus 106 ~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~ 150 (166)
+|+||||+.+|+.+++++|+.++.. .+ .......+++++.+.
T Consensus 101 ~~~~vGD~~~Di~~~~~ag~~~~~~-~~--~~~~~~~ad~v~~~~ 142 (180)
T 1k1e_A 101 QTAYIGDDSVDLPAFAACGTSFAVA-DA--PIYVKNAVDHVLSTH 142 (180)
T ss_dssp GEEEEECSGGGHHHHHHSSEEEECT-TS--CHHHHTTSSEECSSC
T ss_pred HEEEECCCHHHHHHHHHcCCeEEeC-Cc--cHHHHhhCCEEecCC
Confidence 9999999999999999999987643 22 223345677777764
No 100
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=99.54 E-value=5.1e-14 Score=98.98 Aligned_cols=108 Identities=14% Similarity=0.124 Sum_probs=86.9
Q ss_pred HHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCCCceEEEec
Q psy6288 33 LINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFED 112 (166)
Q Consensus 33 ~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD 112 (166)
+|+.|++.|++++|+|++....+...+ +.+|+. +| .+ .||++..++.++++++ +++++|+||||
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~lgi~-~~----~~--------~~~k~~~l~~~~~~~~--~~~~~~~~vGD 110 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARA-RKLKIP-VL----HG--------IDRKDLALKQWCEEQG--IAPERVLYVGN 110 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHH-HHHTCC-EE----ES--------CSCHHHHHHHHHHHHT--CCGGGEEEEEC
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHH-HHcCCe-eE----eC--------CCChHHHHHHHHHHcC--CCHHHEEEEcC
Confidence 699999999999999999988775444 556886 33 22 2899999999999999 99999999999
Q ss_pred CHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCC------hhhhhhhhcC
Q psy6288 113 APNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNS------LEEFKPELYG 159 (166)
Q Consensus 113 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~------~~~l~~~l~~ 159 (166)
+.+|+.+++.+|+..+. .. ........+++++.+ +.++.++|+.
T Consensus 111 ~~nD~~~~~~ag~~v~~-~~--~~~~~~~~ad~v~~~~~~~g~~~~l~~~l~~ 160 (176)
T 3mmz_A 111 DVNDLPCFALVGWPVAV-AS--AHDVVRGAARAVTTVPGGDGAIREIASWILG 160 (176)
T ss_dssp SGGGHHHHHHSSEEEEC-TT--CCHHHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred CHHHHHHHHHCCCeEEC-CC--hhHHHHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 99999999999976443 22 233345677888888 8899888874
No 101
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=99.54 E-value=2.6e-14 Score=101.46 Aligned_cols=109 Identities=17% Similarity=0.074 Sum_probs=85.7
Q ss_pred HHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCCCceEEEe
Q psy6288 32 RLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFE 111 (166)
Q Consensus 32 ~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IG 111 (166)
.+|+.|++.|++++|+||++...+...+ +.+|+..+|+ ..||++..++.++++++ +++++|+|||
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l-~~lgl~~~~~------------~~kpk~~~~~~~~~~~g--~~~~~~~~iG 124 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRC-ATLGITHLYQ------------GQSNKLIAFSDLLEKLA--IAPENVAYVG 124 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHH-HHHTCCEEEC------------SCSCSHHHHHHHHHHHT--CCGGGEEEEE
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHH-HHcCCceeec------------CCCCCHHHHHHHHHHcC--CCHHHEEEEC
Confidence 3799999999999999999987775555 4468876652 24899999999999999 9999999999
Q ss_pred cCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCCh------hhhhhhhc
Q psy6288 112 DAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSL------EEFKPELY 158 (166)
Q Consensus 112 D~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~------~~l~~~l~ 158 (166)
|+.+|+.+|+++|+.++.. .+ .......+++++.+. .++.+.++
T Consensus 125 D~~~Di~~a~~ag~~~~~~-~~--~~~~~~~ad~v~~~~~~~g~~~~~l~~ll 174 (188)
T 2r8e_A 125 DDLIDWPVMEKVGLSVAVA-DA--HPLLIPRADYVTRIAGGRGAVREVCDLLL 174 (188)
T ss_dssp SSGGGHHHHTTSSEEEECT-TS--CTTTGGGSSEECSSCTTTTHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEec-Cc--CHHHHhcCCEEEeCCCCCcHHHHHHHHHH
Confidence 9999999999999987543 22 222334578888886 35555554
No 102
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=99.54 E-value=2.8e-14 Score=101.40 Aligned_cols=108 Identities=14% Similarity=0.096 Sum_probs=86.2
Q ss_pred HHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCCCceEEEec
Q psy6288 33 LINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFED 112 (166)
Q Consensus 33 ~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD 112 (166)
+|+.|++.|++++|+||+....+...+ +.+|+..+|+.+ ++++..++.++++++ +++++|+||||
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~lgl~~~f~~~------------~~K~~~~~~~~~~~g--~~~~~~~~vGD 118 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRA-KSLGIEHLFQGR------------EDKLVVLDKLLAELQ--LGYEQVAYLGD 118 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHH-HHHTCSEEECSC------------SCHHHHHHHHHHHHT--CCGGGEEEEEC
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHH-HHcCCHHHhcCc------------CChHHHHHHHHHHcC--CChhHEEEECC
Confidence 899999999999999999988775554 557998887432 556799999999999 99999999999
Q ss_pred CHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCC------hhhhhhhhc
Q psy6288 113 APNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNS------LEEFKPELY 158 (166)
Q Consensus 113 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~------~~~l~~~l~ 158 (166)
+.+|+.+++++|+..+ +.. ........+++++.+ +.++.++++
T Consensus 119 ~~nDi~~~~~ag~~~~-~~~--~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~ 167 (189)
T 3mn1_A 119 DLPDLPVIRRVGLGMA-VAN--AASFVREHAHGITRAQGGEGAAREFCELIL 167 (189)
T ss_dssp SGGGHHHHHHSSEEEE-CTT--SCHHHHHTSSEECSSCTTTTHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCeEE-eCC--ccHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 9999999999998754 322 223344567787777 677777665
No 103
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=99.52 E-value=2.9e-14 Score=111.18 Aligned_cols=97 Identities=10% Similarity=0.104 Sum_probs=82.5
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhh----cCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCC
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRH----KDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDE 100 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~----~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 100 (166)
.++||+.++|+.|++.|++++|+||+....+...+.+. +++.++|+.. . ..||++..+..+++++|
T Consensus 256 ~~ypgv~e~L~~Lk~~Gi~laI~Snn~~~~v~~~l~~~~~~~l~l~~~~~v~-~--------~~KPKp~~l~~al~~Lg- 325 (387)
T 3nvb_A 256 KAFTEFQEWVKKLKNRGIIIAVCSKNNEGKAKEPFERNPEMVLKLDDIAVFV-A--------NWENKADNIRTIQRTLN- 325 (387)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEESCHHHHHHHHHHCTTCSSCGGGCSEEE-E--------ESSCHHHHHHHHHHHHT-
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhccccccCccCccEEE-e--------CCCCcHHHHHHHHHHhC-
Confidence 57899999999999999999999999988886666442 4677766533 2 25999999999999999
Q ss_pred CCCCCceEEEecCHhHHHHHHHc--CCeEEEecC
Q psy6288 101 KPQPSKCLVFEDAPNGVLGAKAA--GMSCVMVPD 132 (166)
Q Consensus 101 ~~~~~~~i~IGD~~~Di~~a~~~--G~~~i~v~~ 132 (166)
+++++|+||||+..|+.+|+++ |+.++.+..
T Consensus 326 -l~pee~v~VGDs~~Di~aaraalpgV~vi~~p~ 358 (387)
T 3nvb_A 326 -IGFDSMVFLDDNPFERNMVREHVPGVTVPELPE 358 (387)
T ss_dssp -CCGGGEEEECSCHHHHHHHHHHSTTCBCCCCCS
T ss_pred -cCcccEEEECCCHHHHHHHHhcCCCeEEEEcCc
Confidence 9999999999999999999999 888777644
No 104
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=99.51 E-value=2.9e-14 Score=103.16 Aligned_cols=108 Identities=16% Similarity=0.081 Sum_probs=86.0
Q ss_pred HHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCCCceEEEec
Q psy6288 33 LINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFED 112 (166)
Q Consensus 33 ~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD 112 (166)
+|+.|++.|++++|+|++....+...+ +.+|+..+|+.+ ||++..++.++++++ +++++|+||||
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l-~~lgi~~~f~~~------------k~K~~~l~~~~~~lg--~~~~~~~~vGD 148 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRA-NTLGITHLYQGQ------------SDKLVAYHELLATLQ--CQPEQVAYIGD 148 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHH-HHHTCCEEECSC------------SSHHHHHHHHHHHHT--CCGGGEEEEEC
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCchhhccc------------CChHHHHHHHHHHcC--cCcceEEEEcC
Confidence 899999999999999999988775554 557998777322 788999999999999 99999999999
Q ss_pred CHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCCh------hhhhhhhc
Q psy6288 113 APNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSL------EEFKPELY 158 (166)
Q Consensus 113 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~------~~l~~~l~ 158 (166)
+.+|+.+++++|+.++.. .+ .......+++++.+. .++.+.++
T Consensus 149 s~nDi~~~~~ag~~~a~~-~~--~~~~~~~Ad~v~~~~~~~G~v~e~~~~ll 197 (211)
T 3ij5_A 149 DLIDWPVMAQVGLSVAVA-DA--HPLLLPKAHYVTRIKGGRGAVREVCDLIL 197 (211)
T ss_dssp SGGGHHHHTTSSEEEECT-TS--CTTTGGGSSEECSSCTTTTHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEeC-Cc--cHHHHhhCCEEEeCCCCCcHHHHHHHHHH
Confidence 999999999999875543 22 223445677777664 66777665
No 105
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=99.51 E-value=4.2e-16 Score=111.29 Aligned_cols=116 Identities=16% Similarity=0.099 Sum_probs=92.1
Q ss_pred CCccchhHHHHHHHHHHC-CCCEEEEeCCchhhHHHHHhhhcCccc-ccceEEecCCCCCccCCCCChHHHHHHHHHcCC
Q psy6288 23 GYNLAIGALRLINHLHKH-NIPFAIATSSAKESFELKTSRHKDTLK-LFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDE 100 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~l~~~~gl~~-~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 100 (166)
...++||+.++|+.|++. |++++|+||++...+...+ +++|+.. +|+ ..++++++
T Consensus 73 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l-~~~~l~~~~f~---------------------~~~~~~l~- 129 (197)
T 1q92_A 73 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPY-EKYAWVEKYFG---------------------PDFLEQIV- 129 (197)
T ss_dssp TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHH-HHHHHHHHHHC---------------------GGGGGGEE-
T ss_pred cCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHH-HHhchHHHhch---------------------HHHHHHhc-
Confidence 578999999999999999 9999999999877665454 4468888 884 45678889
Q ss_pred CCCCCceEEEecCHhH----HHHHH-HcCCeEEEecCCCCCcccccccchhhCCh-hhhhhhhcCCCC
Q psy6288 101 KPQPSKCLVFEDAPNG----VLGAK-AAGMSCVMVPDPTVPKHRTEAADLVLNSL-EEFKPELYGLPP 162 (166)
Q Consensus 101 ~~~~~~~i~IGD~~~D----i~~a~-~~G~~~i~v~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~~ 162 (166)
++|++|+||||+..| +.+|+ ++|+.++++.++.............++++ .++.++|.++.|
T Consensus 130 -~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~l~~~l~~~~~ 196 (197)
T 1q92_A 130 -LTRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAILDSKRP 196 (197)
T ss_dssp -ECSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHHHHHTTCC
T ss_pred -cCCccEEEECcccccCCchhhhcccCCCceEEEecCcccccccccccchhhhhHHHHHHHHhccccC
Confidence 899999999999999 99999 99999999998765433222223368899 477777765543
No 106
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=99.48 E-value=3.5e-13 Score=97.65 Aligned_cols=105 Identities=10% Similarity=-0.084 Sum_probs=81.0
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecC-------CCCCccCCCCChHHHHHHHHH
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGS-------ADPEVKQGKPAPDVFLVAAKR 97 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~-------~~~~~~~~Kp~~~~~~~~~~~ 97 (166)
.++||+.++|+.|+++|++++|+||+....+...+ +.+|+..+|...+... ..+....+++++..+..++++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~ 170 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIA-RAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAG 170 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHH
Confidence 57999999999999999999999999987775554 5579987775543321 000123356678889999998
Q ss_pred cCC-CCCCCceEEEecCHhHHHHHHHcCCeEEEe
Q psy6288 98 FDE-KPQPSKCLVFEDAPNGVLGAKAAGMSCVMV 130 (166)
Q Consensus 98 ~~~-~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v 130 (166)
++. .+++++|++|||+.+|+.+++.+|+..+..
T Consensus 171 ~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 171 MGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp TTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred cCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 871 036899999999999999999999887653
No 107
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=99.47 E-value=8.4e-16 Score=109.33 Aligned_cols=112 Identities=14% Similarity=0.069 Sum_probs=86.6
Q ss_pred cCCccchhHHHHHHHHHHC-CCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCC
Q psy6288 22 LGYNLAIGALRLINHLHKH-NIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDE 100 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 100 (166)
....++||+.++|+.|++. |++++|+||++...+...+ +.+|+ |+.+++++ ++++++
T Consensus 70 ~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l-~~~gl---f~~i~~~~-----------------~~~~~~- 127 (193)
T 2i7d_A 70 LDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVG-EKYRW---VEQHLGPQ-----------------FVERII- 127 (193)
T ss_dssp TTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHH-HHHHH---HHHHHCHH-----------------HHTTEE-
T ss_pred ccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHH-HHhCc---hhhhcCHH-----------------HHHHcC-
Confidence 3578999999999999999 9999999999877665555 44577 76665432 688899
Q ss_pred CCCCCceEEEecCHhH----HHHHH-HcCCeEEEecCCCCCcccccccch-hhCCh-hhhhhhh
Q psy6288 101 KPQPSKCLVFEDAPNG----VLGAK-AAGMSCVMVPDPTVPKHRTEAADL-VLNSL-EEFKPEL 157 (166)
Q Consensus 101 ~~~~~~~i~IGD~~~D----i~~a~-~~G~~~i~v~~~~~~~~~~~~~~~-~~~~~-~~l~~~l 157 (166)
++|++|+||||+..| +.+|+ ++|+.++++.++...... ..+.+ .++++ .++.+.|
T Consensus 128 -~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~ 189 (193)
T 2i7d_A 128 -LTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLV-LPPTRRRLLSWSDNWREIL 189 (193)
T ss_dssp -ECSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGTTCC-CCTTSCEECSTTSCHHHHH
T ss_pred -CCcccEEEECCchhhCcHHHhhcccccccceEEEEeccCcccc-cccchHHHhhHHHHHHHHh
Confidence 999999999999988 99999 999999999877443322 12344 58888 4444443
No 108
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=99.46 E-value=2.2e-14 Score=106.66 Aligned_cols=113 Identities=13% Similarity=0.078 Sum_probs=83.4
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCC
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQP 104 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 104 (166)
.++||+.++|+.|++.|++++++||+....+...+ +.+|+..+|+.+++++ .... .+...+ .
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~-~~~gl~~~f~~~~~~~---k~~~-------~k~~~~-------~ 205 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVA-EELGLDDYFAEVLPHE---KAEK-------VKEVQQ-------K 205 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCSEEECSCCGGG---HHHH-------HHHHHT-------T
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCChhHhHhcCHHH---HHHH-------HHHHHh-------c
Confidence 68999999999999999999999999988775554 5579999998877665 2222 222222 2
Q ss_pred CceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhh--CChhhhhhhhc
Q psy6288 105 SKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVL--NSLEEFKPELY 158 (166)
Q Consensus 105 ~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~~~~l~~~l~ 158 (166)
-+|++|||+.+|+.+++.+|+ +|.++.........+++++ +++.++...|.
T Consensus 206 ~~~~~vGD~~nDi~~~~~Ag~---~va~~~~~~~~~~~a~~~~~~~~~~~l~~~l~ 258 (280)
T 3skx_A 206 YVTAMVGDGVNDAPALAQADV---GIAIGAGTDVAVETADIVLVRNDPRDVAAIVE 258 (280)
T ss_dssp SCEEEEECTTTTHHHHHHSSE---EEECSCCSSSCCCSSSEECSSCCTHHHHHHHH
T ss_pred CCEEEEeCCchhHHHHHhCCc---eEEecCCcHHHHhhCCEEEeCCCHHHHHHHHH
Confidence 378999999999999999995 4555543444334455544 89999887764
No 109
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=99.45 E-value=3.1e-14 Score=105.67 Aligned_cols=127 Identities=15% Similarity=0.096 Sum_probs=91.9
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchhhHHH--HHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKESFEL--KTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~--~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
..++++.+.+..++. +. ..++||........ .+....++..+|+.+++.+ .....||++.+++.+++++| +
T Consensus 126 ~~~~~~~~~~~~l~~-~~-~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~kp~~~~~~~~~~~lg--i 198 (266)
T 3pdw_A 126 ITYEKFAVGCLAIRN-GA-RFISTNGDIAIPTERGLLPGNGSLTSVLTVSTGVQ---PVFIGKPESIIMEQAMRVLG--T 198 (266)
T ss_dssp CCHHHHHHHHHHHHT-TC-EEEESCCCCEEEETTEEEECHHHHHHHHHHHHCCC---CEECSTTSSHHHHHHHHHHT--C
T ss_pred CCHHHHHHHHHHHHC-CC-eEEEEcCCceeECCCceEecchHHHHHHHHHhCCC---ccccCCCCHHHHHHHHHHcC--C
Confidence 456777777777765 44 45666655321100 0111123556677777777 78889999999999999999 9
Q ss_pred CCCceEEEecC-HhHHHHHHHcCCeEEEecCCCCCcc-ccc---ccchhhCChhhhhhhhc
Q psy6288 103 QPSKCLVFEDA-PNGVLGAKAAGMSCVMVPDPTVPKH-RTE---AADLVLNSLEEFKPELY 158 (166)
Q Consensus 103 ~~~~~i~IGD~-~~Di~~a~~~G~~~i~v~~~~~~~~-~~~---~~~~~~~~~~~l~~~l~ 158 (166)
+++++++|||+ .+|+.+|+.+|+.++++.+|....+ ... .|+++++++.++.+.+.
T Consensus 199 ~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~~~ 259 (266)
T 3pdw_A 199 DVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPYIE 259 (266)
T ss_dssp CGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGGHHHHH
T ss_pred ChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHHhh
Confidence 99999999999 6999999999999999999976554 222 59999999999987653
No 110
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=99.34 E-value=2.2e-12 Score=90.07 Aligned_cols=106 Identities=14% Similarity=0.080 Sum_probs=77.5
Q ss_pred HHHHHHHCCCCEEEEeCCchhhHHHHHhh-hcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCCCceEEEe
Q psy6288 33 LINHLHKHNIPFAIATSSAKESFELKTSR-HKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFE 111 (166)
Q Consensus 33 ~l~~l~~~g~~i~ivS~~~~~~~~~~l~~-~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IG 111 (166)
.|+.|++.|++++|+||. ..+...+.+ .+|+. +| .+ .++++..++.++++++ +++++|+|||
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~~----~g--------~~~K~~~l~~~~~~~g--i~~~~~~~vG 106 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-TE----VS--------VSDKLATVDEWRKEMG--LCWKEVAYLG 106 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-EE----CS--------CSCHHHHHHHHHHHTT--CCGGGEEEEC
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-EE----EC--------CCChHHHHHHHHHHcC--cChHHEEEEe
Confidence 699999999999999999 445444432 34554 32 22 2567999999999999 9999999999
Q ss_pred cCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCC------hhhhhhhhc
Q psy6288 112 DAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNS------LEEFKPELY 158 (166)
Q Consensus 112 D~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~------~~~l~~~l~ 158 (166)
|+.+|+.+++.+|+.++ +..+ .......+++++.+ +.++.++++
T Consensus 107 D~~nDi~~~~~ag~~~a-~~na--~~~~k~~Ad~v~~~~~~~G~~~~~~~~il 156 (168)
T 3ewi_A 107 NEVSDEECLKRVGLSAV-PADA--CSGAQKAVGYICKCSGGRGAIREFAEHIF 156 (168)
T ss_dssp CSGGGHHHHHHSSEEEE-CTTC--CHHHHTTCSEECSSCTTTTHHHHHHHHHH
T ss_pred CCHhHHHHHHHCCCEEE-eCCh--hHHHHHhCCEEeCCCCCccHHHHHHHHHH
Confidence 99999999999998854 4333 23344556666654 444555544
No 111
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=99.30 E-value=2.6e-12 Score=96.45 Aligned_cols=119 Identities=13% Similarity=0.157 Sum_probs=90.2
Q ss_pred ccchhHHHHHHHHHHC-CCCEEEEeCC---------------------chhhHHHHHhhhcCcccccceE----------
Q psy6288 25 NLAIGALRLINHLHKH-NIPFAIATSS---------------------AKESFELKTSRHKDTLKLFHHV---------- 72 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~-g~~i~ivS~~---------------------~~~~~~~~l~~~~gl~~~fd~v---------- 72 (166)
.+++++.++++.+++. |+++++.|+. ....+. .+.+..|+..+|..+
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~~~~~~~~~~~~~~ 200 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIE-KICEEYGVSVNINRCNPLAGDPEDS 200 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHH-HHHHHHTEEEEEEECCGGGTCCTTE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHH-HHHHHcCCCEEEEEccccccCCCCc
Confidence 5678999999999887 9999999977 333343 333445887777654
Q ss_pred EecCCCCCccCCCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhh
Q psy6288 73 VLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEE 152 (166)
Q Consensus 73 ~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 152 (166)
.+.+ .....++++..++.++++++ +++++|++|||+.+|+.+++.+|+. +.+ +.........+++++.+..+
T Consensus 201 ~~~~---~~~~~~~k~~~~~~~~~~~~--~~~~~~~~~GDs~~D~~~~~~ag~~-~~~--~~~~~~~~~~a~~v~~~~~~ 272 (289)
T 3gyg_A 201 YDVD---FIPIGTGKNEIVTFMLEKYN--LNTERAIAFGDSGNDVRMLQTVGNG-YLL--KNATQEAKNLHNLITDSEYS 272 (289)
T ss_dssp EEEE---EEESCCSHHHHHHHHHHHHT--CCGGGEEEEECSGGGHHHHTTSSEE-EEC--TTCCHHHHHHCCCBCSSCHH
T ss_pred eEEE---EEeCCCCHHHHHHHHHHHcC--CChhhEEEEcCCHHHHHHHHhCCcE-EEE--CCccHHHHHhCCEEcCCCCc
Confidence 4555 56678899999999999999 9999999999999999999999944 333 33334444567788777554
No 112
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=99.29 E-value=1.4e-11 Score=86.39 Aligned_cols=107 Identities=15% Similarity=0.063 Sum_probs=79.9
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCc---hhh--HHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHH
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSA---KES--FELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAK 96 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~---~~~--~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~ 96 (166)
....++||+.++|+.|++. ++++|+||+. ... ....+.+.++...+|+.+++++ ..
T Consensus 66 ~~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~---~~--------------- 126 (180)
T 3bwv_A 66 RNLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGR---KN--------------- 126 (180)
T ss_dssp GSCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSC---GG---------------
T ss_pred ccCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCC---cC---------------
Confidence 4578999999999999985 9999999983 211 1233444456667788888877 31
Q ss_pred HcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhhhhhhhcC
Q psy6288 97 RFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 97 ~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 159 (166)
. + ++|++|||++.++. ..+| .++++.++.... ..++++++++.++..+|.+
T Consensus 127 --~--l--~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~---~~~~~~i~~~~el~~~l~~ 177 (180)
T 3bwv_A 127 --I--I--LADYLIDDNPKQLE--IFEG-KSIMFTASHNVY---EHRFERVSGWRDVKNYFNS 177 (180)
T ss_dssp --G--B--CCSEEEESCHHHHH--HCSS-EEEEECCGGGTT---CCSSEEECSHHHHHHHHHH
T ss_pred --e--e--cccEEecCCcchHH--HhCC-CeEEeCCCcccC---CCCceecCCHHHHHHHHHH
Confidence 1 2 66999999999985 4589 999998774322 4577899999999887754
No 113
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=99.28 E-value=1.7e-13 Score=98.00 Aligned_cols=98 Identities=8% Similarity=0.068 Sum_probs=84.3
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCC
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQ 103 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 103 (166)
..++||+.++|++|++. +.++|+|++....+... .+.+++..+|+.+++.+ ++...| ..|.+.++++| .+
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~v-l~~ld~~~~f~~~l~rd---~~~~~k---~~~lK~L~~Lg--~~ 136 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPV-ADLLDRWGVFRARLFRE---SCVFHR---GNYVKDLSRLG--RE 136 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHH-HHHHCCSSCEEEEECGG---GCEEET---TEEECCGGGSS--SC
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHH-HHHhCCcccEEEEEEcc---cceecC---CceeeeHhHhC--CC
Confidence 45799999999999998 99999999998877554 45579999999999888 666555 56788899999 99
Q ss_pred CCceEEEecCHhHHHHHHHcCCeEEEec
Q psy6288 104 PSKCLVFEDAPNGVLGAKAAGMSCVMVP 131 (166)
Q Consensus 104 ~~~~i~IGD~~~Di~~a~~~G~~~i~v~ 131 (166)
+++|++|||+..++.++.++|+....+.
T Consensus 137 ~~~~vivDDs~~~~~~~~~ngi~i~~~~ 164 (195)
T 2hhl_A 137 LSKVIIVDNSPASYIFHPENAVPVQSWF 164 (195)
T ss_dssp GGGEEEEESCGGGGTTCGGGEEECCCCS
T ss_pred hhHEEEEECCHHHhhhCccCccEEeeec
Confidence 9999999999999999999999875443
No 114
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=99.22 E-value=5.9e-13 Score=94.10 Aligned_cols=95 Identities=7% Similarity=0.086 Sum_probs=81.4
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCC
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQ 103 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 103 (166)
..++||+.++|++|++. +.++|+|++....+... .+.++...+|+.+++.+ ++...| ..|.+.++++| .+
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~v-l~~ld~~~~f~~~~~rd---~~~~~k---~~~~k~L~~Lg--~~ 123 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPV-ADLLDKWGAFRARLFRE---SCVFHR---GNYVKDLSRLG--RD 123 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHH-HHHHCTTCCEEEEECGG---GSEEET---TEEECCGGGTC--SC
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHH-HHHHCCCCcEEEEEecc---CceecC---CcEeccHHHhC--CC
Confidence 46799999999999997 99999999998877554 45679989999999887 665443 45778889999 99
Q ss_pred CCceEEEecCHhHHHHHHHcCCeEE
Q psy6288 104 PSKCLVFEDAPNGVLGAKAAGMSCV 128 (166)
Q Consensus 104 ~~~~i~IGD~~~Di~~a~~~G~~~i 128 (166)
+++|++|||+..++.++.++|+...
T Consensus 124 ~~~~vivdDs~~~~~~~~~ngi~i~ 148 (181)
T 2ght_A 124 LRRVLILDNSPASYVFHPDNAVPVA 148 (181)
T ss_dssp GGGEEEECSCGGGGTTCTTSBCCCC
T ss_pred cceEEEEeCCHHHhccCcCCEeEec
Confidence 9999999999999999999999853
No 115
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=99.20 E-value=3.2e-11 Score=89.68 Aligned_cols=99 Identities=9% Similarity=0.074 Sum_probs=73.8
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCc---hhhHHHHHhhhcCcc--cccceEEecCCCCCccCCCCChHHHHHHHHHc
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSA---KESFELKTSRHKDTL--KLFHHVVLGSADPEVKQGKPAPDVFLVAAKRF 98 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~---~~~~~~~l~~~~gl~--~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~ 98 (166)
..++||+.++|+.|++.|++++|+||++ ...+...+ +.+|+. .+|+.+++.+ .. .||.+ ...+ .+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L-~~~Gl~~v~~~~vi~~~~---~~--~K~~~--~~~~-~~~ 170 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNL-ERVGAPQATKEHILLQDP---KE--KGKEK--RREL-VSQ 170 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHH-HHHTCSSCSTTTEEEECT---TC--CSSHH--HHHH-HHH
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHH-HHcCCCcCCCceEEECCC---CC--CCcHH--HHHH-HHh
Confidence 6789999999999999999999999998 33343444 446888 7787777766 32 35443 3332 233
Q ss_pred CCCCCCCceEEEecCHhHHHHHH-------H---------cCCeEEEecCCCC
Q psy6288 99 DEKPQPSKCLVFEDAPNGVLGAK-------A---------AGMSCVMVPDPTV 135 (166)
Q Consensus 99 ~~~~~~~~~i~IGD~~~Di~~a~-------~---------~G~~~i~v~~~~~ 135 (166)
+ .+.|+||||+.+|+.+|+ + +|+.++.+.++..
T Consensus 171 ~----~~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y 219 (258)
T 2i33_A 171 T----HDIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMY 219 (258)
T ss_dssp H----EEEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSS
T ss_pred C----CCceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCc
Confidence 4 344999999999999993 4 7999999988843
No 116
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=99.12 E-value=3.7e-10 Score=91.01 Aligned_cols=106 Identities=14% Similarity=0.068 Sum_probs=78.8
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcC-------------cccccceEEecCCCCCccC-CCC----
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKD-------------TLKLFHHVVLGSADPEVKQ-GKP---- 86 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~g-------------l~~~fd~v~~~~~~~~~~~-~Kp---- 86 (166)
...|.+..+|++|++.| +++++||+....+.......+| +.++||.|+.....|.... ..|
T Consensus 246 ~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~pfr~V 324 (555)
T 2jc9_A 246 VKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQV 324 (555)
T ss_dssp CCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCCCEEEE
T ss_pred CCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCCcceEe
Confidence 34679999999999999 9999999998766444333335 5689999766652221100 000
Q ss_pred -----------------ChHH-----HHHHHHHcCCCCCCCceEEEecCH-hHHHHHH-HcCCeEEEecCC
Q psy6288 87 -----------------APDV-----FLVAAKRFDEKPQPSKCLVFEDAP-NGVLGAK-AAGMSCVMVPDP 133 (166)
Q Consensus 87 -----------------~~~~-----~~~~~~~~~~~~~~~~~i~IGD~~-~Di~~a~-~~G~~~i~v~~~ 133 (166)
.... +..+++.+| +..++++||||.+ +||..++ ..|+.+++|...
T Consensus 325 d~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg--~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE 393 (555)
T 2jc9_A 325 DTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLG--AKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE 393 (555)
T ss_dssp ETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHT--CCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred ecCCCccccccccccccCCceeccCCHHHHHHHhC--CCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence 0011 588999999 9999999999999 9999997 899999999765
No 117
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=99.07 E-value=1.4e-10 Score=89.83 Aligned_cols=78 Identities=15% Similarity=0.249 Sum_probs=63.5
Q ss_pred cCCCCChHHHHHHHHHc----------------------CC---CCCCCceEEEecCH-hHHHHHHHcCCeEEEecCCCC
Q psy6288 82 KQGKPAPDVFLVAAKRF----------------------DE---KPQPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPTV 135 (166)
Q Consensus 82 ~~~Kp~~~~~~~~~~~~----------------------~~---~~~~~~~i~IGD~~-~Di~~a~~~G~~~i~v~~~~~ 135 (166)
..+||.+.+|+.+.+.+ +. ..++++++||||++ +||.+|+++|+.+++|.+|..
T Consensus 243 ~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~ 322 (352)
T 3kc2_A 243 TLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVY 322 (352)
T ss_dssp ECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSC
T ss_pred EecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCCC
Confidence 46899999999886654 20 02679999999999 699999999999999999865
Q ss_pred Ccc---cccccchhhCChhhhhhhhcC
Q psy6288 136 PKH---RTEAADLVLNSLEEFKPELYG 159 (166)
Q Consensus 136 ~~~---~~~~~~~~~~~~~~l~~~l~~ 159 (166)
... ....|+++++++.++.+++++
T Consensus 323 ~~~~~~~~~~pd~vi~~l~el~~~il~ 349 (352)
T 3kc2_A 323 NEGDDLKECKPTLIVNDVFDAVTKTLE 349 (352)
T ss_dssp CTTCCCTTCCCSEECSSHHHHHHHHHH
T ss_pred CcccccccCCCCEEECCHHHHHHHHHH
Confidence 443 246789999999999998763
No 118
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=99.06 E-value=8.9e-10 Score=81.43 Aligned_cols=130 Identities=12% Similarity=0.107 Sum_probs=87.9
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCch------hhHHHHHhhhcCc-------------ccccceEEecCC-------
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAK------ESFELKTSRHKDT-------------LKLFHHVVLGSA------- 77 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~------~~~~~~l~~~~gl-------------~~~fd~v~~~~~------- 77 (166)
....+++.++++.+++.|+.+.+.|+... ........+.+++ ..+|+.++.++.
T Consensus 84 ~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 163 (261)
T 2rbk_A 84 AIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVL 163 (261)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCCHHHHHHHG
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEeCHHHHHHHH
Confidence 34568899999999988999888876542 1121011111221 233333333220
Q ss_pred -----------CC----CccCCCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccc
Q psy6288 78 -----------DP----EVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEA 142 (166)
Q Consensus 78 -----------~~----~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~ 142 (166)
.+ -....+|++..++.++++++ +++++|++|||+.+|+.+++.+|+..+ + +.........
T Consensus 164 ~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~--~~~~~~~~iGD~~nD~~~~~~ag~~v~-~--~n~~~~~~~~ 238 (261)
T 2rbk_A 164 PSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFG--IKLEETMSFGDGGNDISMLRHAAIGVA-M--GQAKEDVKAA 238 (261)
T ss_dssp GGSTTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHT--CCGGGEEEEECSGGGHHHHHHSSEEEE-C--TTSCHHHHHH
T ss_pred HhcCCeEEEEecCCeEEecCCCCChHHHHHHHHHHcC--CCHHHEEEECCCHHHHHHHHHcCceEE-e--cCccHHHHhh
Confidence 00 14557889999999999999 999999999999999999999998433 3 3333334467
Q ss_pred cchhhCChhh--hhhhhc
Q psy6288 143 ADLVLNSLEE--FKPELY 158 (166)
Q Consensus 143 ~~~~~~~~~~--l~~~l~ 158 (166)
+++++.+..+ +...|.
T Consensus 239 a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 239 ADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp SSEECCCGGGTHHHHHHH
T ss_pred CCEEeccCchhhHHHHHH
Confidence 8889999988 777654
No 119
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=98.92 E-value=6.3e-09 Score=77.32 Aligned_cols=66 Identities=20% Similarity=0.138 Sum_probs=52.8
Q ss_pred cCCCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhh
Q psy6288 82 KQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEE 152 (166)
Q Consensus 82 ~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 152 (166)
....+++..++.+++++| ++++++++|||+.+|+.+++.+| ++|..+.........+++++.+..+
T Consensus 193 ~~~~~K~~~l~~l~~~lg--i~~~~~i~~GD~~NDi~m~~~ag---~~vam~na~~~~k~~A~~v~~~~~e 258 (279)
T 4dw8_A 193 PQGIDKALSLSVLLENIG--MTREEVIAIGDGYNDLSMIKFAG---MGVAMGNAQEPVKKAADYITLTNDE 258 (279)
T ss_dssp CTTCCHHHHHHHHHHHHT--CCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHCSEECCCGGG
T ss_pred cCCCChHHHHHHHHHHcC--CCHHHEEEECCChhhHHHHHHcC---cEEEcCCCcHHHHHhCCEEcCCCCC
Confidence 345677999999999999 99999999999999999999999 4555555455555667887777543
No 120
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=98.91 E-value=4.9e-09 Score=76.21 Aligned_cols=116 Identities=18% Similarity=0.080 Sum_probs=80.9
Q ss_pred hhHHHHHHHHH-HC-CCCE-----------EEEe-CCchhhHHHHHhhhcCcccccceEEecCCCC-CccCCCCChHHHH
Q psy6288 28 IGALRLINHLH-KH-NIPF-----------AIAT-SSAKESFELKTSRHKDTLKLFHHVVLGSADP-EVKQGKPAPDVFL 92 (166)
Q Consensus 28 ~g~~~~l~~l~-~~-g~~i-----------~ivS-~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~-~~~~~Kp~~~~~~ 92 (166)
+.+.++++.++ +. |+.+ ++++ +.....+. .+.+.++ ..|+.+ ++...- .....+|++..++
T Consensus 84 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~-~~~~~~ei~~~~~~K~~~~~ 159 (231)
T 1wr8_A 84 DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVR-EIINELN--LNLVAV-DSGFAIHVKKPWINKGSGIE 159 (231)
T ss_dssp SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHH-HHHHHTT--CSCEEE-ECSSCEEEECTTCCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHH-HHHHhcC--CcEEEE-ecCcEEEEecCCCChHHHHH
Confidence 78888888888 65 6654 5666 33444443 3334333 456655 442000 2345789999999
Q ss_pred HHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhh
Q psy6288 93 VAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEE 152 (166)
Q Consensus 93 ~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 152 (166)
.++++++ ++++++++|||+.+|+.+++.+|+. +.+.++ .......+++++.+..+
T Consensus 160 ~~~~~~~--~~~~~~~~iGD~~nD~~~~~~ag~~-v~~~~~--~~~~~~~a~~v~~~~~e 214 (231)
T 1wr8_A 160 KASEFLG--IKPKEVAHVGDGENDLDAFKVVGYK-VAVAQA--PKILKENADYVTKKEYG 214 (231)
T ss_dssp HHHHHHT--SCGGGEEEEECSGGGHHHHHHSSEE-EECTTS--CHHHHTTCSEECSSCHH
T ss_pred HHHHHcC--CCHHHEEEECCCHHHHHHHHHcCCe-EEecCC--CHHHHhhCCEEecCCCc
Confidence 9999999 9999999999999999999999998 556554 23334467888877654
No 121
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.85 E-value=8.2e-09 Score=85.77 Aligned_cols=114 Identities=18% Similarity=0.172 Sum_probs=81.2
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
..++.|++.+.++.|++.|++++++|+.....+. .+.+.+|+..+|..+ . |+.-..++++++ .
T Consensus 455 ~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~-~ia~~lgi~~~~~~~------------~--P~~K~~~v~~l~--~ 517 (645)
T 3j08_A 455 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAE-AISRELNLDLVIAEV------------L--PHQKSEEVKKLQ--A 517 (645)
T ss_dssp ECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHH-HHHHHHTCSEEECSC------------C--TTCHHHHHHHHT--T
T ss_pred cCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHHcCCCEEEEeC------------C--HHhHHHHHHHHh--h
Confidence 3568999999999999999999999999987764 444556886544221 1 112345666676 4
Q ss_pred CCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhh--CChhhhhhhh
Q psy6288 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVL--NSLEEFKPEL 157 (166)
Q Consensus 103 ~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~~~~l~~~l 157 (166)
. ++++||||+.+|+.+.+.+|+ +|..+.........+|+++ +++..+...+
T Consensus 518 ~-~~v~~vGDg~ND~~al~~A~v---giamg~g~~~a~~~AD~vl~~~~~~~i~~~i 570 (645)
T 3j08_A 518 K-EVVAFVGDGINDAPALAQADL---GIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 570 (645)
T ss_dssp T-CCEEEEECSSSCHHHHHHSSE---EEEECCCSCCSSCCSSSEESSCCTTHHHHHH
T ss_pred C-CeEEEEeCCHhHHHHHHhCCE---EEEeCCCcHHHHHhCCEEEecCCHHHHHHHH
Confidence 4 899999999999999999994 3333322333445667776 6777766554
No 122
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=98.85 E-value=1e-08 Score=74.61 Aligned_cols=130 Identities=11% Similarity=0.048 Sum_probs=88.8
Q ss_pred hhhhhhhc--CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccccc-----ceEEecCCCCC-------
Q psy6288 15 FDMDGLLL--GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLF-----HHVVLGSADPE------- 80 (166)
Q Consensus 15 ~~~~~~~~--~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~f-----d~v~~~~~~~~------- 80 (166)
.|+++.+. ...+-|.+.++|++|+++|++++++|+.+...+...+.+ +++..++ ..+...... .
T Consensus 10 ~DlDGTLl~~~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~-l~~~~~~I~~NGa~i~~~~~~-~i~~~~~l 87 (227)
T 1l6r_A 10 IDVDGNLTDRDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIF-LGINGPVFGENGGIMFDNDGS-IKKFFSNE 87 (227)
T ss_dssp EEHHHHSBCTTSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCCSCEEEGGGTEEECTTSC-EEESSCSH
T ss_pred EECCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHH-hCCCCeEEEeCCcEEEeCCCC-EEEEeccH
Confidence 45666444 345678999999999999999999999998777555433 4654311 001100000 0
Q ss_pred ------------------------------------------------------------ccCCCCChHHHHHHHHHcCC
Q psy6288 81 ------------------------------------------------------------VKQGKPAPDVFLVAAKRFDE 100 (166)
Q Consensus 81 ------------------------------------------------------------~~~~Kp~~~~~~~~~~~~~~ 100 (166)
.....++...++.++++++
T Consensus 88 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~- 166 (227)
T 1l6r_A 88 GTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYS- 166 (227)
T ss_dssp HHHHHHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhC-
Confidence 0223556888999999999
Q ss_pred CCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChh
Q psy6288 101 KPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLE 151 (166)
Q Consensus 101 ~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~ 151 (166)
++++++++|||+.+|+.+++.+|+. +.+.++ .......+++++.+..
T Consensus 167 -~~~~~~~~iGD~~nD~~m~~~ag~~-va~~n~--~~~~k~~a~~v~~~~~ 213 (227)
T 1l6r_A 167 -LEYDEILVIGDSNNDMPMFQLPVRK-ACPANA--TDNIKAVSDFVSDYSY 213 (227)
T ss_dssp -CCGGGEEEECCSGGGHHHHTSSSEE-EECTTS--CHHHHHHCSEECSCCT
T ss_pred -cCHHHEEEECCcHHhHHHHHHcCce-EEecCc--hHHHHHhCCEEecCCC
Confidence 9999999999999999999999985 455443 2333345677776643
No 123
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=98.77 E-value=4.3e-08 Score=73.16 Aligned_cols=66 Identities=15% Similarity=0.126 Sum_probs=52.2
Q ss_pred cCCCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhh
Q psy6288 82 KQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEE 152 (166)
Q Consensus 82 ~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 152 (166)
....+++.+++.+++++| +++++|++|||+.+|+.+++.+|+. |.-+.........+++++.+..+
T Consensus 198 ~~~~~K~~~l~~l~~~lg--i~~~~~i~~GD~~NDi~m~~~ag~~---vam~na~~~~k~~Ad~v~~s~~e 263 (290)
T 3dnp_A 198 PKGVSKEAGLALVASELG--LSMDDVVAIGHQYDDLPMIELAGLG---VAMGNAVPEIKRKADWVTRSNDE 263 (290)
T ss_dssp ETTCCHHHHHHHHHHHTT--CCGGGEEEEECSGGGHHHHHHSSEE---EECTTSCHHHHHHSSEECCCTTT
T ss_pred ECCCCHHHHHHHHHHHcC--CCHHHEEEECCchhhHHHHHhcCCE---EEecCCcHHHHHhcCEECCCCCc
Confidence 345667999999999999 9999999999999999999999963 33343344455677888777665
No 124
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=98.76 E-value=6.2e-09 Score=77.40 Aligned_cols=107 Identities=13% Similarity=0.097 Sum_probs=71.5
Q ss_pred HHCCCCEEEEeCCchhhHHHHHhhhcC--cccccceEEecCCC-CCccCCCCChHHHHHHHHHcCCCCCCCceEEEecCH
Q psy6288 38 HKHNIPFAIATSSAKESFELKTSRHKD--TLKLFHHVVLGSAD-PEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAP 114 (166)
Q Consensus 38 ~~~g~~i~ivS~~~~~~~~~~l~~~~g--l~~~fd~v~~~~~~-~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~ 114 (166)
++.++++.++++... . ..+.+.++ +...|+.+.++... +-....++++..++.+++.++ ++++++++|||+.
T Consensus 143 ~~~~~ki~i~~~~~~--~-~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~--i~~~~~~~~GD~~ 217 (271)
T 1rlm_A 143 DDVLFKFSLNLPDEQ--I-PLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWD--LSPQNVVAIGDSG 217 (271)
T ss_dssp CSCEEEEEEECCGGG--H-HHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHT--CCGGGEEEEECSG
T ss_pred CCceEEEEEEcCHHH--H-HHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhC--CCHHHEEEECCcH
Confidence 345677888876542 2 22222222 34456655555200 023457888999999999999 9999999999999
Q ss_pred hHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhh
Q psy6288 115 NGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEE 152 (166)
Q Consensus 115 ~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 152 (166)
+|+.+++.+|+. +.+..+ .......+++++.+..+
T Consensus 218 nD~~m~~~ag~~-va~~na--~~~~k~~a~~v~~~~~~ 252 (271)
T 1rlm_A 218 NDAEMLKMARYS-FAMGNA--AENIKQIARYATDDNNH 252 (271)
T ss_dssp GGHHHHHHCSEE-EECTTC--CHHHHHHCSEECCCGGG
T ss_pred HHHHHHHHcCCe-EEeCCc--cHHHHHhCCeeCcCCCC
Confidence 999999999985 345433 23334567777777544
No 125
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=98.75 E-value=3.3e-09 Score=78.72 Aligned_cols=85 Identities=13% Similarity=0.013 Sum_probs=60.5
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchh----hHHHHHhhhcCcccccc-eEEecCCCCCccCCCCChHHHHHHHHH
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKE----SFELKTSRHKDTLKLFH-HVVLGSADPEVKQGKPAPDVFLVAAKR 97 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~----~~~~~l~~~~gl~~~fd-~v~~~~~~~~~~~~Kp~~~~~~~~~~~ 97 (166)
..+++||+.++|+.|++.|++++++||.+.. .....+. .+|+..+++ .++... . ...+...+..+.++
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~-~lGi~~~~~~~Lilr~---~---~~~K~~~r~~l~~~ 171 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMK-RLGFNGVEESAFYLKK---D---KSAKAARFAEIEKQ 171 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHH-HHTCSCCSGGGEEEES---S---CSCCHHHHHHHHHT
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHH-HcCcCcccccceeccC---C---CCChHHHHHHHHhc
Confidence 5789999999999999999999999998653 4444454 469987763 444433 1 12234555555544
Q ss_pred cCCCCCCCceEEEecCHhHHHH
Q psy6288 98 FDEKPQPSKCLVFEDAPNGVLG 119 (166)
Q Consensus 98 ~~~~~~~~~~i~IGD~~~Di~~ 119 (166)
| . .-+++|||.+.|+.+
T Consensus 172 -G--y--~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 172 -G--Y--EIVLYVGDNLDDFGN 188 (262)
T ss_dssp -T--E--EEEEEEESSGGGGCS
T ss_pred -C--C--CEEEEECCChHHhcc
Confidence 4 2 349999999999998
No 126
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=98.74 E-value=3.7e-08 Score=72.77 Aligned_cols=67 Identities=9% Similarity=0.158 Sum_probs=53.5
Q ss_pred ccCCCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhh
Q psy6288 81 VKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEE 152 (166)
Q Consensus 81 ~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 152 (166)
....++++..++.+++++| ++++++++|||+.+|+.+++.+|+ +|..+....+....+++++.+..+
T Consensus 195 ~~~~~~K~~~l~~l~~~lg--i~~~~~i~~GD~~NDi~m~~~ag~---~vam~na~~~~k~~A~~v~~~~~e 261 (274)
T 3fzq_A 195 IQKDFHKGKAIKRLQERLG--VTQKETICFGDGQNDIVMFQASDV---TIAMKNSHQQLKDIATSICEDIFD 261 (274)
T ss_dssp EETTCSHHHHHHHHHHHHT--CCSTTEEEECCSGGGHHHHHTCSE---EEEETTSCHHHHHHCSEEECCGGG
T ss_pred eeCCCCHHHHHHHHHHHcC--CCHHHEEEECCChhHHHHHHhcCc---eEEecCccHHHHHhhhheeCCCch
Confidence 3456778999999999999 999999999999999999999994 444454445555667888777654
No 127
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=98.74 E-value=6.2e-09 Score=77.16 Aligned_cols=98 Identities=10% Similarity=0.011 Sum_probs=67.1
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchh----hHHHHHhhhcCcccccc-eEEecCCCCCccCCCCChHHHHHHHHH
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKE----SFELKTSRHKDTLKLFH-HVVLGSADPEVKQGKPAPDVFLVAAKR 97 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~----~~~~~l~~~~gl~~~fd-~v~~~~~~~~~~~~Kp~~~~~~~~~~~ 97 (166)
..+++||+.++|+.|++.|++++++||.+.. .....+.+ +|+..+++ .++... . ++.+...+..+.+
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~-lGi~~~~~~~Lilr~---~----~~~K~~~r~~L~~ 170 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKR-LGFTGVNDKTLLLKK---D----KSNKSVRFKQVED 170 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHH-HTCCCCSTTTEEEES---S----CSSSHHHHHHHHT
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHH-cCcCccccceeEecC---C----CCChHHHHHHHHh
Confidence 4789999999999999999999999998653 45445544 69988774 343332 1 2334444444555
Q ss_pred cCCCCCCCceEEEecCHhHHHH--------HHHcCCeEEEecC
Q psy6288 98 FDEKPQPSKCLVFEDAPNGVLG--------AKAAGMSCVMVPD 132 (166)
Q Consensus 98 ~~~~~~~~~~i~IGD~~~Di~~--------a~~~G~~~i~v~~ 132 (166)
.+ ..-+++|||+..|+.+ +|++++......+
T Consensus 171 ~g----y~iv~~iGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~f 209 (260)
T 3pct_A 171 MG----YDIVLFVGDNLNDFGDATYKKSNAERRDFVAKNSKAF 209 (260)
T ss_dssp TT----CEEEEEEESSGGGGCGGGTTCCHHHHHHHHHHTGGGB
T ss_pred cC----CCEEEEECCChHHcCcccccCCHHHHHHHHHHHHHHh
Confidence 45 3449999999999998 5665544433333
No 128
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=98.72 E-value=2.3e-08 Score=74.26 Aligned_cols=61 Identities=16% Similarity=0.093 Sum_probs=43.7
Q ss_pred CChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChh
Q psy6288 86 PAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLE 151 (166)
Q Consensus 86 p~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~ 151 (166)
.++..++.+++++| ++++++++|||+.+|+.+++.+|+ +|..+....+....+++++.+..
T Consensus 197 ~K~~~l~~l~~~lg--i~~~~~i~~GD~~NDi~m~~~ag~---~vam~na~~~~k~~A~~v~~~~~ 257 (279)
T 3mpo_A 197 SKGGTLSELVDQLG--LTADDVMTLGDQGNDLTMIKYAGL---GVAMGNAIDEVKEAAQAVTLTNA 257 (279)
T ss_dssp CHHHHHHHHHHHTT--CCGGGEEEC--CCTTHHHHHHSTE---ECBC---CCHHHHHCSCBC----
T ss_pred ChHHHHHHHHHHcC--CCHHHEEEECCchhhHHHHHhcCc---eeeccCCCHHHHHhcceeccCCC
Confidence 36899999999999 999999999999999999999994 45555444455566777776644
No 129
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.70 E-value=6.4e-08 Score=81.38 Aligned_cols=114 Identities=17% Similarity=0.155 Sum_probs=80.8
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
..++.|++.+.++.|++.|++++++|+.....+. .+.+.+|+..+| ..- . |.--..+.++++ .
T Consensus 533 ~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~-~ia~~lgi~~~~----~~~--------~--P~~K~~~v~~l~--~ 595 (723)
T 3j09_A 533 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAE-AISRELNLDLVI----AEV--------L--PHQKSEEVKKLQ--A 595 (723)
T ss_dssp ECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHH-HHHHHHTCSEEE----CSC--------C--TTCHHHHHHHHT--T
T ss_pred cCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHH-HHHHHcCCcEEE----ccC--------C--HHHHHHHHHHHh--c
Confidence 3578999999999999999999999999977764 444556886544 211 1 112355666676 4
Q ss_pred CCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhh--CChhhhhhhh
Q psy6288 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVL--NSLEEFKPEL 157 (166)
Q Consensus 103 ~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~~~~l~~~l 157 (166)
. ++++||||+.||+.+.+.+|+ +|.-+.........+|+++ +++..+...+
T Consensus 596 ~-~~v~~vGDg~ND~~al~~A~v---giamg~g~~~a~~~AD~vl~~~~~~~i~~~i 648 (723)
T 3j09_A 596 K-EVVAFVGDGINDAPALAQADL---GIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 648 (723)
T ss_dssp T-CCEEEEECSSTTHHHHHHSSE---EEECCCCSCCSSCCSSEECSSCCTTHHHHHH
T ss_pred C-CeEEEEECChhhHHHHhhCCE---EEEeCCCcHHHHHhCCEEEeCCCHHHHHHHH
Confidence 4 899999999999999999994 3333322333446667776 6777666554
No 130
>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A
Probab=98.59 E-value=4.9e-07 Score=72.02 Aligned_cols=107 Identities=14% Similarity=0.057 Sum_probs=77.1
Q ss_pred cchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhc--------CcccccceEEecCCCCC--------------cc-
Q psy6288 26 LAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHK--------DTLKLFHHVVLGSADPE--------------VK- 82 (166)
Q Consensus 26 ~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~--------gl~~~fd~v~~~~~~~~--------------~~- 82 (166)
..|.+..+|++|+++|.+++++||+...-......-.+ .+.++||.|++....|. .+
T Consensus 187 k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~g~ 266 (470)
T 4g63_A 187 REKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGT 266 (470)
T ss_dssp CCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTTCC
T ss_pred CCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCCCc
Confidence 35889999999999999999999998765433332223 46789999988752111 00
Q ss_pred ------CCCCC---hHHHHHHHHHcCCCCCCCceEEEecCH-hHHHHHHH-cCCeEEEecCCC
Q psy6288 83 ------QGKPA---PDVFLVAAKRFDEKPQPSKCLVFEDAP-NGVLGAKA-AGMSCVMVPDPT 134 (166)
Q Consensus 83 ------~~Kp~---~~~~~~~~~~~~~~~~~~~~i~IGD~~-~Di~~a~~-~G~~~i~v~~~~ 134 (166)
..+|. ..-.....+-+| +...+++||||++ .||..++. .||.+++|...-
T Consensus 267 l~~~~~~~~~~vY~gGn~~~l~~llg--~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL 327 (470)
T 4g63_A 267 MTNVHGPIVPGVYQGGNAKKFTEDLG--VGGDEILYIGDHIYGDILRLKKDCNWRTALVVEEL 327 (470)
T ss_dssp EEECCSSCCSEEEEECCHHHHHHHTT--CCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTTH
T ss_pred ccccccccCCceeecCcHHHHHHHhC--CCCCeEEEECCchHHHHHhhhhccCCeEEEEhHHH
Confidence 00110 122456667778 8899999999999 99888886 599999998763
No 131
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=98.56 E-value=1.5e-07 Score=70.34 Aligned_cols=112 Identities=20% Similarity=0.134 Sum_probs=69.8
Q ss_pred HCCCCEEEEe-CCchhhHHHHHhhhcCcccccceEEecCCCC-CccCCCCChHHHHHHHHHcCCCCCCCceEEEecCHhH
Q psy6288 39 KHNIPFAIAT-SSAKESFELKTSRHKDTLKLFHHVVLGSADP-EVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNG 116 (166)
Q Consensus 39 ~~g~~i~ivS-~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~-~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~D 116 (166)
+..+++.++. ..........+.+.++ ..+..+.++...- -.....++..+++.+++++| ++++++++|||+.+|
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg--i~~~e~ia~GD~~ND 239 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPAWN--KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFD--LLPDEVCCFGDNLND 239 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHHHT--TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTT--CCGGGEEEEECSGGG
T ss_pred cCceEEEEEcChHHHHHHHHHHHHHhc--CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhC--CCHHHEEEECCCHHH
Confidence 5567888873 3322221122222222 3344444443000 12334557899999999999 999999999999999
Q ss_pred HHHHHHcCCeEEEecCCCCCcccccccchhhCChhh--hhhhh
Q psy6288 117 VLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEE--FKPEL 157 (166)
Q Consensus 117 i~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~--l~~~l 157 (166)
+.+++.+|+. +.+.++ ..+....+++++.+..+ +...|
T Consensus 240 i~ml~~ag~~-vam~na--~~~~k~~A~~v~~s~~edGv~~~l 279 (283)
T 3dao_A 240 IEMLQNAGIS-YAVSNA--RQEVIAAAKHTCAPYWENGVLSVL 279 (283)
T ss_dssp HHHHHHSSEE-EEETTS--CHHHHHHSSEEECCGGGTHHHHHH
T ss_pred HHHHHhCCCE-EEcCCC--CHHHHHhcCeECCCCCCChHHHHH
Confidence 9999999953 444333 34455677888777665 44444
No 132
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=98.48 E-value=2.2e-07 Score=78.20 Aligned_cols=114 Identities=13% Similarity=0.088 Sum_probs=79.4
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
..++.|++.+.|+.|++.|++++++|+.....+. .+.+.+|+..++ ..- .|+--..+.++++ .
T Consensus 552 ~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~-~ia~~lgi~~v~----a~~----------~P~~K~~~v~~l~--~ 614 (736)
T 3rfu_A 552 EDPIKSSTPETILELQQSGIEIVMLTGDSKRTAE-AVAGTLGIKKVV----AEI----------MPEDKSRIVSELK--D 614 (736)
T ss_dssp ECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHH-HHHHHHTCCCEE----CSC----------CHHHHHHHHHHHH--H
T ss_pred eccchhhHHHHHHHHHHCCCeEEEECCCCHHHHH-HHHHHcCCCEEE----Eec----------CHHHHHHHHHHHH--h
Confidence 3578899999999999999999999999987664 444556886544 111 2444556666666 5
Q ss_pred CCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhh--CChhhhhhh
Q psy6288 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVL--NSLEEFKPE 156 (166)
Q Consensus 103 ~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~~~~l~~~ 156 (166)
..+.++||||+.||+.+-+.+|+.. .+..+ .......+|+++ +++..+...
T Consensus 615 ~g~~V~~vGDG~ND~paL~~AdvGI-Amg~g--~d~a~~~AD~vl~~~~~~~i~~a 667 (736)
T 3rfu_A 615 KGLIVAMAGDGVNDAPALAKADIGI-AMGTG--TDVAIESAGVTLLHGDLRGIAKA 667 (736)
T ss_dssp HSCCEEEEECSSTTHHHHHHSSEEE-EESSS--CSHHHHHCSEEECSCCSTTHHHH
T ss_pred cCCEEEEEECChHhHHHHHhCCEEE-EeCCc--cHHHHHhCCEEEccCCHHHHHHH
Confidence 5678999999999999999999653 33333 222344556654 455555443
No 133
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=98.47 E-value=2.4e-07 Score=80.41 Aligned_cols=126 Identities=13% Similarity=0.077 Sum_probs=83.3
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccccc----ceEEecCCCCCccC---------------
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLF----HHVVLGSADPEVKQ--------------- 83 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~f----d~v~~~~~~~~~~~--------------- 83 (166)
..++.|++.++++.|++.|++++++|+.....+. .+.+.+|+.... +.+++++ +...
T Consensus 601 ~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~-~ia~~lgi~~~~~~i~~~~~~g~---~~~~l~~~~~~~~~~~~~v 676 (995)
T 3ar4_A 601 LDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAI-AICRRIGIFGENEEVADRAYTGR---EFDDLPLAEQREACRRACC 676 (995)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHTSSCTTCCCTTTEEEHH---HHHTSCHHHHHHHHHHCCE
T ss_pred cCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHH-HHHHHcCcCCCCCcccceEEEch---hhhhCCHHHHHHHHhhCcE
Confidence 3578999999999999999999999999977764 444556886432 1233332 1111
Q ss_pred -CCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhh--CChhhhhhhh
Q psy6288 84 -GKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVL--NSLEEFKPEL 157 (166)
Q Consensus 84 -~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~~~~l~~~l 157 (166)
..-.|.--..+.+.++ ...+.++|+||+.+|+.+.+++++.... ..+ .......+|+++ +++..+...+
T Consensus 677 ~~r~~P~~K~~~v~~l~--~~g~~v~~~GDG~ND~~alk~Advgiam-g~g--~~~ak~aAd~vl~~~~~~~i~~~i 748 (995)
T 3ar4_A 677 FARVEPSHKSKIVEYLQ--SYDEITAMTGDGVNDAPALKKAEIGIAM-GSG--TAVAKTASEMVLADDNFSTIVAAV 748 (995)
T ss_dssp EESCCSSHHHHHHHHHH--TTTCCEEEEECSGGGHHHHHHSTEEEEE-TTS--CHHHHHTCSEEETTCCHHHHHHHH
T ss_pred EEEeCHHHHHHHHHHHH--HCCCEEEEEcCCchhHHHHHHCCeEEEe-CCC--CHHHHHhCCEEECCCCHHHHHHHH
Confidence 1111334455556665 4467899999999999999999986543 333 122344567766 4577766554
No 134
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=98.44 E-value=8.7e-07 Score=66.74 Aligned_cols=64 Identities=23% Similarity=0.200 Sum_probs=51.5
Q ss_pred CCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhh
Q psy6288 84 GKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEE 152 (166)
Q Consensus 84 ~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 152 (166)
..++...++.+++++| ++++++++|||+.+|+.+++.+|+. |..+....+....+++++.+..+
T Consensus 226 ~~~K~~al~~l~~~lg--i~~~e~i~~GDs~NDi~m~~~ag~~---vam~na~~~~k~~Ad~v~~~~~e 289 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWN--FTSDHLMAFGDGGNDIEMLKLAKYS---YAMANAPKNVKAAANYQAKSNDE 289 (304)
T ss_dssp TCSHHHHHHHHHHHTT--CCGGGEEEEECSGGGHHHHHHCTEE---EECTTSCHHHHHHCSEECCCGGG
T ss_pred CCCHHHHHHHHHHHhC--cCHHHEEEECCCHHHHHHHHhcCCe---EEcCCcCHHHHHhccEEcCCCCc
Confidence 4556889999999999 9999999999999999999999943 44444444555677888888555
No 135
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=98.37 E-value=2.6e-07 Score=69.60 Aligned_cols=101 Identities=15% Similarity=0.087 Sum_probs=64.6
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEec----CCCC---------CccCCCCChH
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLG----SADP---------EVKQGKPAPD 89 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~----~~~~---------~~~~~Kp~~~ 89 (166)
..++.||+.++++.|+++|++++++|++....+. .+.+.+|+......+++. +.+. .....|+.+.
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~-~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~ 217 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLE-EVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 217 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHH-HHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHH-HHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHH
Confidence 4689999999999999999999999999877664 444546765432223222 1000 0111222222
Q ss_pred HHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCe
Q psy6288 90 VFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMS 126 (166)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~ 126 (166)
.-.....++. ....+++|+||+.+|+.+++...-.
T Consensus 218 ~k~~~~~~~~--~~~~~v~~vGDGiNDa~m~k~l~~a 252 (297)
T 4fe3_A 218 LKNTDYFSQL--KDNSNIILLGDSQGDLRMADGVANV 252 (297)
T ss_dssp HTCHHHHHHT--TTCCEEEEEESSGGGGGTTTTCSCC
T ss_pred HHHHHHHHhh--ccCCEEEEEeCcHHHHHHHhCcccc
Confidence 2223334444 4678999999999999997754433
No 136
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=98.37 E-value=4.4e-06 Score=61.21 Aligned_cols=61 Identities=11% Similarity=0.184 Sum_probs=48.1
Q ss_pred ChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhh
Q psy6288 87 APDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEE 152 (166)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 152 (166)
+...++.+++.+| +++++|++|||+.+|+.+++.+|+..+ +. ....+....+++++.+..+
T Consensus 184 K~~~l~~l~~~lg--i~~~~~ia~GDs~NDi~ml~~ag~~va-m~--na~~~~k~~A~~v~~~~~~ 244 (258)
T 2pq0_A 184 KAEGIRMMIEKLG--IDKKDVYAFGDGLNDIEMLSFVGTGVA-MG--NAHEEVKRVADFVTKPVDK 244 (258)
T ss_dssp HHHHHHHHHHHHT--CCGGGEEEECCSGGGHHHHHHSSEEEE-ET--TCCHHHHHTCSEEECCGGG
T ss_pred hHHHHHHHHHHhC--CCHHHEEEECCcHHhHHHHHhCCcEEE-eC--CCcHHHHHhCCEEeCCCCc
Confidence 4678999999999 999999999999999999999999655 43 3333444567777766554
No 137
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=98.26 E-value=2.6e-06 Score=62.71 Aligned_cols=65 Identities=20% Similarity=0.268 Sum_probs=50.6
Q ss_pred CCCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhh
Q psy6288 83 QGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEE 152 (166)
Q Consensus 83 ~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 152 (166)
...++...++.+++++| ++++++++|||+.+|+.+++.+|+. |.-+....+....+++++.+..+
T Consensus 191 ~~~~K~~~l~~l~~~lg--i~~~~~ia~GD~~NDi~m~~~ag~~---vam~na~~~~k~~Ad~v~~~~~e 255 (268)
T 3r4c_A 191 AGTSKATGLSLFADYYR--VKVSEIMACGDGGNDIPMLKAAGIG---VAMGNASEKVQSVADFVTDTVDN 255 (268)
T ss_dssp TTCCHHHHHHHHHHHTT--CCGGGEEEEECSGGGHHHHHHSSEE---EECTTSCHHHHHTCSEECCCTTT
T ss_pred CCCCHHHHHHHHHHHcC--CCHHHEEEECCcHHhHHHHHhCCCe---EEeCCCcHHHHHhcCEeeCCCCc
Confidence 34566899999999999 9999999999999999999999954 33343344445567777776544
No 138
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=98.20 E-value=8.7e-06 Score=63.66 Aligned_cols=100 Identities=9% Similarity=-0.022 Sum_probs=60.8
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccc--cceEEecC----CCCC----ccC--CCCChHHH
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKL--FHHVVLGS----ADPE----VKQ--GKPAPDVF 91 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~--fd~v~~~~----~~~~----~~~--~Kp~~~~~ 91 (166)
.+++|++.++++.|+++|++++|||++....++ .+.+.+|+..- -+.|++.. .++. ... .-.....-
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~-~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK 298 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVR-AFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGK 298 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHH-HHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHH
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHH-HHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCch
Confidence 357999999999999999999999999988774 44454554221 13333321 0000 000 01122222
Q ss_pred HHHHHHcC-CCCCCCceEEEecCHhHHHHHHHcC
Q psy6288 92 LVAAKRFD-EKPQPSKCLVFEDAPNGVLGAKAAG 124 (166)
Q Consensus 92 ~~~~~~~~-~~~~~~~~i~IGD~~~Di~~a~~~G 124 (166)
..+++++- .......++++|||.+|+.+-+..+
T Consensus 299 ~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~ 332 (385)
T 4gxt_A 299 VQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFD 332 (385)
T ss_dssp HHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCT
T ss_pred HHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCc
Confidence 33333321 0034677999999999999999853
No 139
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=98.20 E-value=8.7e-07 Score=66.10 Aligned_cols=56 Identities=18% Similarity=0.145 Sum_probs=43.9
Q ss_pred CCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccc
Q psy6288 84 GKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAAD 144 (166)
Q Consensus 84 ~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~ 144 (166)
..++...++.+++.+| ++++++++|||+.+|+.+++.+|+ +|.-+....+....++
T Consensus 207 ~~~K~~al~~l~~~lg--i~~~~~ia~GD~~NDi~ml~~ag~---~vAm~Na~~~vk~~A~ 262 (285)
T 3pgv_A 207 GVSKGHALEAVAKMLG--YTLSDCIAFGDGMNDAEMLSMAGK---GCIMANAHQRLKDLHP 262 (285)
T ss_dssp TCSHHHHHHHHHHHTT--CCGGGEEEEECSGGGHHHHHHSSE---EEECTTSCHHHHHHCT
T ss_pred CCChHHHHHHHHHHhC--CCHHHEEEECCcHhhHHHHHhcCC---EEEccCCCHHHHHhCC
Confidence 4557899999999999 999999999999999999999993 4444433344444444
No 140
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=98.08 E-value=9.1e-06 Score=70.86 Aligned_cols=126 Identities=15% Similarity=0.118 Sum_probs=79.0
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccc------------------------cceEEecCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKL------------------------FHHVVLGSAD 78 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~------------------------fd~v~~~~~~ 78 (166)
..++.|++.++|+.|+++|++++++|+.....+. .+.+.+|+... +..++.+.
T Consensus 597 ~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~-~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~-- 673 (1028)
T 2zxe_A 597 IDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAK-AIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGS-- 673 (1028)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHH-HHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHH--
T ss_pred CCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHH-HHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcH--
Confidence 3578999999999999999999999999977664 44444576521 01122221
Q ss_pred CC------------------ccCCCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccc
Q psy6288 79 PE------------------VKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRT 140 (166)
Q Consensus 79 ~~------------------~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~ 140 (166)
+ .......|.--..+.+.++ .....+.|+||+.||+.+-+.+++....=..+. ....
T Consensus 674 -~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq--~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gt--d~ak 748 (1028)
T 2zxe_A 674 -DLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQ--RQGAIVAVTGDGVNDSPALKKADIGVAMGISGS--DVSK 748 (1028)
T ss_dssp -HHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHH--HTTCCEEEEECSGGGHHHHHHSSEEEEESSSCC--HHHH
T ss_pred -HhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHH--hCCCEEEEEcCCcchHHHHHhCCceEEeCCccC--HHHH
Confidence 1 0122334555555555554 334679999999999999999998765311231 1223
Q ss_pred cccchhhC--Chhhhhhh
Q psy6288 141 EAADLVLN--SLEEFKPE 156 (166)
Q Consensus 141 ~~~~~~~~--~~~~l~~~ 156 (166)
..+|+++. ++..+...
T Consensus 749 ~aAD~Vl~~~~~~~I~~~ 766 (1028)
T 2zxe_A 749 QAADMILLDDNFASIVTG 766 (1028)
T ss_dssp HHCSEEETTCCTHHHHHH
T ss_pred HhcCEEecCCCHHHHHHH
Confidence 44565543 35555443
No 141
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=98.06 E-value=3.3e-06 Score=62.49 Aligned_cols=70 Identities=19% Similarity=0.214 Sum_probs=51.9
Q ss_pred CCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhh--hhhhhc
Q psy6288 84 GKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEE--FKPELY 158 (166)
Q Consensus 84 ~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~--l~~~l~ 158 (166)
..+++..++.++++++ +++++|++|||+.+|+.+++.+|+. +.+ +.........+++++.+..+ +...|.
T Consensus 188 ~~~K~~~~~~~~~~~~--~~~~~~~~~GD~~nD~~~~~~ag~~-v~~--~n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 188 NVDKGKALRFLRERMN--WKKEEIVVFGDNENDLFMFEEAGLR-VAM--ENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp TCCHHHHHHHHHHHHT--CCGGGEEEEECSHHHHHHHTTCSEE-EEC--TTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred CCChHHHHHHHHHHcC--CCHHHeEEEcCchhhHHHHHHcCCE-EEe--cCCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 4466889999999999 9999999999999999999999984 333 33333334457777776443 544444
No 142
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=97.95 E-value=6.1e-06 Score=60.62 Aligned_cols=46 Identities=11% Similarity=0.002 Sum_probs=40.8
Q ss_pred CCChHHHHHHHHHcCCCCCC--CceEEEecCHhHHHHHHHcCCeEEEecCC
Q psy6288 85 KPAPDVFLVAAKRFDEKPQP--SKCLVFEDAPNGVLGAKAAGMSCVMVPDP 133 (166)
Q Consensus 85 Kp~~~~~~~~~~~~~~~~~~--~~~i~IGD~~~Di~~a~~~G~~~i~v~~~ 133 (166)
++++..++.++++++ +++ +++++|||+.+|+.+++.+|+. +.+...
T Consensus 175 ~~K~~~l~~l~~~~~--i~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na 222 (259)
T 3zx4_A 175 ADKGRAVARLRALWP--DPEEARFAVGLGDSLNDLPLFRAVDLA-VYVGRG 222 (259)
T ss_dssp CCHHHHHHHHHHTCS--SHHHHTSEEEEESSGGGHHHHHTSSEE-EECSSS
T ss_pred CCHHHHHHHHHHHhC--CCCCCceEEEEeCCHHHHHHHHhCCCe-EEeCCh
Confidence 778999999999999 888 9999999999999999999975 455444
No 143
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=97.94 E-value=9.1e-06 Score=60.64 Aligned_cols=62 Identities=19% Similarity=0.122 Sum_probs=48.8
Q ss_pred CChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhh
Q psy6288 86 PAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEE 152 (166)
Q Consensus 86 p~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 152 (166)
.+...++.+++.++ +++++|++|||+.+|+.+++.+|+ ++.+.++ .......+++++.+..+
T Consensus 216 ~K~~~~~~~~~~~~--~~~~~~~~~GD~~nD~~m~~~ag~-~va~~~~--~~~~~~~a~~v~~~~~~ 277 (288)
T 1nrw_A 216 SKGQALKRLAKQLN--IPLEETAAVGDSLNDKSMLEAAGK-GVAMGNA--REDIKSIADAVTLTNDE 277 (288)
T ss_dssp SHHHHHHHHHHHTT--CCGGGEEEEESSGGGHHHHHHSSE-EEECTTC--CHHHHHHCSEECCCGGG
T ss_pred ChHHHHHHHHHHhC--CCHHHEEEEcCCHHHHHHHHHcCc-EEEEcCC--CHHHHhhCceeecCCCc
Confidence 34678999999999 999999999999999999999999 6677554 23333456777766544
No 144
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=97.93 E-value=3e-05 Score=66.79 Aligned_cols=127 Identities=13% Similarity=0.034 Sum_probs=77.6
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccccc-c---eEEecCCCC-----------CccCCCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLF-H---HVVLGSADP-----------EVKQGKPA 87 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~f-d---~v~~~~~~~-----------~~~~~Kp~ 87 (166)
..++.|++.++++.|++.|+++.++|+.....+ ..+.+.+|+.... + .++++.... ......-.
T Consensus 533 ~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA-~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~ 611 (920)
T 1mhs_A 533 MDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIA-RETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVF 611 (920)
T ss_dssp CCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHH-HHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCC
T ss_pred eccccccHHHHHHHHhhcCceEEEEcCCCHHHH-HHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeC
Confidence 357899999999999999999999999997766 4445556885311 0 011100000 00111222
Q ss_pred hHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhh--CChhhhhh
Q psy6288 88 PDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVL--NSLEEFKP 155 (166)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~~~~l~~ 155 (166)
|+--..+.+.+. -..+.+.|+||+.||..+-+++++.... ..+ .......+|+++ +++..+..
T Consensus 612 P~~K~~iV~~Lq--~~g~~Vam~GDGvNDapaLk~AdvGIAm-g~g--td~ak~aADiVl~~~~~~~I~~ 676 (920)
T 1mhs_A 612 PQHKYNVVEILQ--QRGYLVAMTGDGVNDAPSLKKADTGIAV-EGS--SDAARSAADIVFLAPGLGAIID 676 (920)
T ss_dssp STHHHHHHHHHH--TTTCCCEECCCCGGGHHHHHHSSEEEEE-TTS--CHHHHHSSSEEESSCCSHHHHH
T ss_pred HHHHHHHHHHHH--hCCCeEEEEcCCcccHHHHHhCCcCccc-ccc--cHHHHHhcCeEEcCCCHHHHHH
Confidence 334445555555 3457899999999999999999986554 333 222234455544 34544443
No 145
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=97.91 E-value=1.2e-06 Score=62.65 Aligned_cols=97 Identities=10% Similarity=0.069 Sum_probs=73.5
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcc-cccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTL-KLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~-~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
...+||+.+||+.+. +++.++|.|++....+... .+.++.. .+|+..+..+ ++... ...|.+.++.+| .
T Consensus 58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~v-l~~LDp~~~~f~~rl~R~---~c~~~---~g~y~KdL~~Lg--r 127 (204)
T 3qle_A 58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKI-AEKLDPIHAFVSYNLFKE---HCVYK---DGVHIKDLSKLN--R 127 (204)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHH-HHHTSTTCSSEEEEECGG---GSEEE---TTEEECCGGGSC--S
T ss_pred EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHH-HHHhCCCCCeEEEEEEec---ceeEE---CCeeeecHHHhC--C
Confidence 467999999999999 5799999999998877544 4556776 4788777665 44331 223677888899 9
Q ss_pred CCCceEEEecCHhHHHHHHHcCCeEEEe
Q psy6288 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMV 130 (166)
Q Consensus 103 ~~~~~i~IGD~~~Di~~a~~~G~~~i~v 130 (166)
++++|++|+|++.-+....+.|+.....
T Consensus 128 dl~~vIiIDDsp~~~~~~p~N~I~I~~~ 155 (204)
T 3qle_A 128 DLSKVIIIDTDPNSYKLQPENAIPMEPW 155 (204)
T ss_dssp CGGGEEEEESCTTTTTTCGGGEEECCCC
T ss_pred ChHHEEEEECCHHHHhhCccCceEeeeE
Confidence 9999999999998776666666655444
No 146
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=97.90 E-value=1.2e-05 Score=59.97 Aligned_cols=64 Identities=20% Similarity=0.152 Sum_probs=49.2
Q ss_pred CCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhh
Q psy6288 84 GKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEE 152 (166)
Q Consensus 84 ~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 152 (166)
.-++...++.++++++ ++++++++|||+.+|+.+++.+|+ ++.+.++ .......+++++.+..+
T Consensus 196 ~~~K~~~l~~l~~~~~--~~~~~~~~~GD~~nD~~m~~~ag~-~va~~n~--~~~~~~~a~~v~~~~~~ 259 (282)
T 1rkq_A 196 RVNKGTGVKSLADVLG--IKPEEIMAIGDQENDIAMIEYAGV-GVAVDNA--IPSVKEVANFVTKSNLE 259 (282)
T ss_dssp TCSHHHHHHHHHHHHT--CCGGGEEEEECSGGGHHHHHHSSE-EEECTTS--CHHHHHHCSEECCCTTT
T ss_pred CCCCHHHHHHHHHHhC--CCHHHEEEECCcHHHHHHHHHCCc-EEEecCC--cHHHHhhCCEEecCCCc
Confidence 3456889999999999 999999999999999999999998 4555443 23333457777766433
No 147
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=97.78 E-value=2.7e-05 Score=59.41 Aligned_cols=113 Identities=15% Similarity=0.063 Sum_probs=67.7
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCC-C----------------ccCCCC
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADP-E----------------VKQGKP 86 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~-~----------------~~~~Kp 86 (166)
..+.+++.++|+.|++ |++++++|+.....+.. ..+.+++ ++.+.+..... . ....++
T Consensus 102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 176 (332)
T 1y8a_A 102 AKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRR-TASMIGV---RGELHGTEVDFDSIAVPEGLREELLSIIDVIASLS 176 (332)
T ss_dssp CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHH-HHHHTTC---CSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcc-cchhhhh---hhhhcccccchhhhccccccceeEEecCHHHHhhh
Confidence 4679999999999999 99999999887443432 2333344 23222221000 0 000111
Q ss_pred C---------------hHHHH------------HHHHHcCCCCCCCc----eEEEecCHhHHHHHHHc----CCeEEEec
Q psy6288 87 A---------------PDVFL------------VAAKRFDEKPQPSK----CLVFEDAPNGVLGAKAA----GMSCVMVP 131 (166)
Q Consensus 87 ~---------------~~~~~------------~~~~~~~~~~~~~~----~i~IGD~~~Di~~a~~~----G~~~i~v~ 131 (166)
. +..+. .+++ + +++++ |++|||+.+|+.+++.+ |+..+ +
T Consensus 177 ~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~--g--i~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~va-m- 250 (332)
T 1y8a_A 177 GEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMR--G--YCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIA-F- 250 (332)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHH--H--HHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEE-E-
T ss_pred hHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHh--c--cChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEE-e-
Confidence 1 11122 1222 5 67888 99999999999999999 99744 4
Q ss_pred CCCCCcccccccchhhCC
Q psy6288 132 DPTVPKHRTEAADLVLNS 149 (166)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~ 149 (166)
++ .......+++++.+
T Consensus 251 na--~~~lk~~Ad~v~~~ 266 (332)
T 1y8a_A 251 NG--NEYALKHADVVIIS 266 (332)
T ss_dssp SC--CHHHHTTCSEEEEC
T ss_pred cC--CHHHHhhCcEEecC
Confidence 43 22333456666655
No 148
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=97.73 E-value=5.2e-05 Score=66.16 Aligned_cols=103 Identities=14% Similarity=0.048 Sum_probs=66.0
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccc------------------------cceEEecCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKL------------------------FHHVVLGSAD 78 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~------------------------fd~v~~~~~~ 78 (166)
..++.|++.++|+.|+++|++++++|+.....+. .+.+.+|+... ...++.+..-
T Consensus 602 ~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~-~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 680 (1034)
T 3ixz_A 602 IDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAK-AIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQL 680 (1034)
T ss_pred cCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHH-HHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhh
Confidence 4679999999999999999999999999977664 44444576321 0012221100
Q ss_pred ---------------CCccCCCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEE
Q psy6288 79 ---------------PEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCV 128 (166)
Q Consensus 79 ---------------~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i 128 (166)
.......-.|.--..+.+.++ .....++++||+.||+.+-+.+|+...
T Consensus 681 ~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq--~~g~~V~a~GDG~ND~~mLk~A~vGIA 743 (1034)
T 3ixz_A 681 KDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQ--RLGAIVAVTGDGVNDSPALKKADIGVA 743 (1034)
T ss_pred hhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHH--HcCCEEEEECCcHHhHHHHHHCCeeEE
Confidence 000111122333344444444 344569999999999999999997644
No 149
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=97.63 E-value=3.9e-05 Score=57.76 Aligned_cols=62 Identities=21% Similarity=0.163 Sum_probs=48.6
Q ss_pred CCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhC-Ch
Q psy6288 84 GKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLN-SL 150 (166)
Q Consensus 84 ~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~-~~ 150 (166)
.-++...++.+++.++ ++++++++|||+.+|+.+++.+|+. +.+.++ .......+++++. +.
T Consensus 222 ~~~K~~~l~~l~~~~~--~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na--~~~~k~~a~~v~~~~~ 284 (301)
T 2b30_A 222 GHDKYTGINYLLKHYN--ISNDQVLVVGDAENDIAMLSNFKYS-FAVANA--TDSAKSHAKCVLPVSH 284 (301)
T ss_dssp TCCHHHHHHHHHHHTT--CCGGGEEEEECSGGGHHHHHSCSEE-EECTTC--CHHHHHHSSEECSSCT
T ss_pred CCCcHHHHHHHHHHcC--CCHHHEEEECCCHHHHHHHHHcCCe-EEEcCC--cHHHHhhCCEEEccCC
Confidence 3456889999999999 9999999999999999999999985 555544 2333345677776 53
No 150
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=97.61 E-value=5.5e-05 Score=64.97 Aligned_cols=128 Identities=15% Similarity=0.087 Sum_probs=78.4
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccc-c-ceEEecC-CCC-----C--------ccCCCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKL-F-HHVVLGS-ADP-----E--------VKQGKP 86 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~-f-d~v~~~~-~~~-----~--------~~~~Kp 86 (166)
..++.|++.+.++.|++.|+++.++|+.....+ ..+.+.+|+..- + ..++.+. -+. . .....-
T Consensus 486 ~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA-~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv 564 (885)
T 3b8c_A 486 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIG-KETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGV 564 (885)
T ss_dssp CCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHH-THHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECC
T ss_pred ecccchhHHHHHHHHHHcCCcEEEEcCCChHHH-HHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEE
Confidence 357899999999999999999999999997766 445555687421 1 1111111 000 0 011223
Q ss_pred ChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhh--CChhhhhhh
Q psy6288 87 APDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVL--NSLEEFKPE 156 (166)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~--~~~~~l~~~ 156 (166)
.|+--..+.+.+. -..+.+.|+||+.||..+-+++++.... ..+ .......+|+++ +++..+...
T Consensus 565 ~P~~K~~iV~~lq--~~g~~Vam~GDGvNDapaLk~AdvGIAm-g~g--td~ak~aADivl~~~~~~~I~~a 631 (885)
T 3b8c_A 565 FPEHKYEIVKKLQ--ERKHIVGMTGDGVNDAPALKKADIGIAV-ADA--TDAARGASDIVLTEPGLSVIISA 631 (885)
T ss_dssp CHHHHHHHHHHHH--HTTCCCCBCCCSSTTHHHHHHSSSCCCC-SSS--HHHHGGGCSSCCSSCSHHHHTHH
T ss_pred CHHHHHHHHHHHH--HCCCeEEEEcCCchhHHHHHhCCEeEEe-CCc--cHHHHHhcceeeccCchhHHHHH
Confidence 3444455555555 3456899999999999999999876443 222 122334456554 335555443
No 151
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=97.53 E-value=5e-05 Score=55.37 Aligned_cols=64 Identities=14% Similarity=0.108 Sum_probs=48.1
Q ss_pred CCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCccccc-------ccchhhCChhh
Q psy6288 84 GKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTE-------AADLVLNSLEE 152 (166)
Q Consensus 84 ~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~-------~~~~~~~~~~~ 152 (166)
.-++...++.+++.++ ++++++++|||+.+|+.+++.+|+. +.+.++ ...... .+++++.+..+
T Consensus 160 ~~~K~~~l~~l~~~~~--~~~~~~~~~GD~~nD~~m~~~~g~~-va~~na--~~~~k~~a~~~~~~a~~v~~~~~~ 230 (244)
T 1s2o_A 160 RSNKGNATQYLQQHLA--MEPSQTLVCGDSGNDIGLFETSARG-VIVRNA--QPELLHWYDQWGDSRHYRAQSSHA 230 (244)
T ss_dssp TCSHHHHHHHHHHHTT--CCGGGEEEEECSGGGHHHHTSSSEE-EECTTC--CHHHHHHHHHHCCTTEEECSSCHH
T ss_pred CCChHHHHHHHHHHhC--CCHHHEEEECCchhhHHHHhccCcE-EEEcCC--cHHHHHHHhcccccceeecCCcch
Confidence 4466899999999999 9999999999999999999988874 555433 333222 25677665543
No 152
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=97.45 E-value=6.8e-05 Score=54.80 Aligned_cols=64 Identities=6% Similarity=-0.058 Sum_probs=49.2
Q ss_pred CCChHHHHHHHHHcCCCC-CCCceEEEecCHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCChhh
Q psy6288 85 KPAPDVFLVAAKRFDEKP-QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEE 152 (166)
Q Consensus 85 Kp~~~~~~~~~~~~~~~~-~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 152 (166)
-.+...++.+++.++ + +++++++|||+.+|+.+.+.+|.. +.+.++.. .+....+++++++..+
T Consensus 178 ~sKg~al~~l~~~~~--~~~~~~viafGD~~NDi~Ml~~ag~~-va~gna~~-~~~~~~a~~v~~~~~~ 242 (249)
T 2zos_A 178 SDKGKAAKILLDFYK--RLGQIESYAVGDSYNDFPMFEVVDKV-FIVGSLKH-KKAQNVSSIIDVLEVI 242 (249)
T ss_dssp CCHHHHHHHHHHHHH--TTSCEEEEEEECSGGGHHHHTTSSEE-EEESSCCC-TTEEEESSHHHHHHHH
T ss_pred CChHHHHHHHHHHhc--cCCCceEEEECCCcccHHHHHhCCcE-EEeCCCCc-cccchhceEEeccccc
Confidence 345889999999999 8 899999999999999999999985 55655431 2233457777776654
No 153
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=97.43 E-value=0.00052 Score=52.95 Aligned_cols=99 Identities=19% Similarity=0.207 Sum_probs=70.1
Q ss_pred HHhhhhhhhc-CCccchhHHHHHHHHHHCCCCEEEEeCCch---hhHHHHHhhhcCcccccceEEecCCCCCccCCCCCh
Q psy6288 13 VIFDMDGLLL-GYNLAIGALRLINHLHKHNIPFAIATSSAK---ESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAP 88 (166)
Q Consensus 13 ~~~~~~~~~~-~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~---~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~ 88 (166)
++.|+++.+. ...+.||+.++|+.|++.|++++++||++. .....++.+.+|+.-..+.|+++. ....
T Consensus 16 ~l~D~DGvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~---~~~~----- 87 (352)
T 3kc2_A 16 FAFDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSH---TPYK----- 87 (352)
T ss_dssp EEECCBTTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTT---GGGG-----
T ss_pred EEEECCCeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehH---HHHH-----
Confidence 4567777555 467899999999999999999999999862 334455554578876677888776 2111
Q ss_pred HHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEe
Q psy6288 89 DVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMV 130 (166)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v 130 (166)
. +- .....+++||-. .-...+++.|+..+..
T Consensus 88 ~--------~~--~~~~~v~viG~~-~l~~~l~~~G~~~v~~ 118 (352)
T 3kc2_A 88 S--------LV--NKYSRILAVGTP-SVRGVAEGYGFQDVVH 118 (352)
T ss_dssp G--------GT--TTCSEEEEESST-THHHHHHHHTCSEEEE
T ss_pred H--------HH--hcCCEEEEECCH-HHHHHHHhCCCeEecc
Confidence 0 11 123678888865 5577888999988853
No 154
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=97.34 E-value=0.00013 Score=56.79 Aligned_cols=80 Identities=15% Similarity=0.198 Sum_probs=60.3
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccc-ccc-eEEecCCCCCccCCCCChHHHHHHHHHc-C
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLK-LFH-HVVLGSADPEVKQGKPAPDVFLVAAKRF-D 99 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~-~fd-~v~~~~~~~~~~~~Kp~~~~~~~~~~~~-~ 99 (166)
...++||+.+||+.+. .+|.++|.|++...-+. .+.+.++... +|+ .+++.+ +++. .|.+.++++ +
T Consensus 73 ~v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~-~vl~~LDp~~~~f~~ri~sr~---~~g~------~~~KdL~~L~~ 141 (372)
T 3ef0_A 73 YIKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAK-EVAKIIDPTGKLFQDRVLSRD---DSGS------LAQKSLRRLFP 141 (372)
T ss_dssp EEEECTTHHHHHHHHH-TTEEEEEECSSCHHHHH-HHHHHHCTTSCSSSSCEECTT---TSSC------SSCCCGGGTCS
T ss_pred EEEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHH-HHHHHhccCCceeeeEEEEec---CCCC------cceecHHHhcC
Confidence 3567999999999999 57999999999988764 4556678776 787 465555 3321 234456665 8
Q ss_pred CCCCCCceEEEecCHh
Q psy6288 100 EKPQPSKCLVFEDAPN 115 (166)
Q Consensus 100 ~~~~~~~~i~IGD~~~ 115 (166)
.++++|++|+|++.
T Consensus 142 --~dl~~viiiDd~~~ 155 (372)
T 3ef0_A 142 --CDTSMVVVIDDRGD 155 (372)
T ss_dssp --SCCTTEEEEESCSG
T ss_pred --CCCceEEEEeCCHH
Confidence 89999999999984
No 155
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=96.92 E-value=0.00072 Score=50.00 Aligned_cols=105 Identities=14% Similarity=0.096 Sum_probs=68.4
Q ss_pred HHHHHHHHHHhhhhhhhc-CCccchhHHHHHHHHHHCCCCEEEEeCC---chhhHHHHHhhhcCcc-cccceEEecCCCC
Q psy6288 5 QVLNYVTHVIFDMDGLLL-GYNLAIGALRLINHLHKHNIPFAIATSS---AKESFELKTSRHKDTL-KLFHHVVLGSADP 79 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~l~~l~~~g~~i~ivS~~---~~~~~~~~l~~~~gl~-~~fd~v~~~~~~~ 79 (166)
+++..++.+..|+++.+. ...+.|++.++|++|++.|++++++||+ ........+ +.+|+. ..++.++++.
T Consensus 9 ~~~~~~k~i~~D~DGtL~~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l-~~lg~~~~~~~~ii~~~--- 84 (284)
T 2hx1_A 9 SLLPKYKCIFFDAFGVLKTYNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSY-HKLGLFSITADKIISSG--- 84 (284)
T ss_dssp HHGGGCSEEEECSBTTTEETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHH-HHTTCTTCCGGGEEEHH---
T ss_pred HHHhcCCEEEEcCcCCcCcCCeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHH-HHCCcCCCCHhhEEcHH---
Confidence 344445556778888655 3567899999999999999999999984 444444454 446887 6677777765
Q ss_pred CccCCCCChHHHHHHHHHcCCCCCCCceE-EEecCHhHHHHHHHcCCeE
Q psy6288 80 EVKQGKPAPDVFLVAAKRFDEKPQPSKCL-VFEDAPNGVLGAKAAGMSC 127 (166)
Q Consensus 80 ~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i-~IGD~~~Di~~a~~~G~~~ 127 (166)
....+.+.+++. . ++. ++|.. ......++.|+..
T Consensus 85 --------~~~~~~l~~~~~----~-~v~~~lg~~-~l~~~l~~~G~~~ 119 (284)
T 2hx1_A 85 --------MITKEYIDLKVD----G-GIVAYLGTA-NSANYLVSDGIKM 119 (284)
T ss_dssp --------HHHHHHHHHHCC----S-EEEEEESCH-HHHHTTCBTTEEE
T ss_pred --------HHHHHHHHhhcC----C-cEEEEecCH-HHHHHHHHCCCee
Confidence 122222333333 3 777 78875 4455566667653
No 156
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=96.79 E-value=0.0044 Score=45.25 Aligned_cols=96 Identities=24% Similarity=0.277 Sum_probs=62.4
Q ss_pred hhhhhhhc-CCccchhHHHHHHHHHHCCCCEEEEeCCchhhH---HHHHhhhcCcccccceEEecCCCCCccCCCCChHH
Q psy6288 15 FDMDGLLL-GYNLAIGALRLINHLHKHNIPFAIATSSAKESF---ELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDV 90 (166)
Q Consensus 15 ~~~~~~~~-~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~---~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~ 90 (166)
.|+++.+. ...+.|++.++|++|++.|++++++||++.... ...+. .+|+....+.++++. ..
T Consensus 6 ~D~DGtL~~~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~-~lg~~~~~~~i~~~~-----------~~- 72 (263)
T 1zjj_A 6 FDMDGVLYRGNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLL-KMGIDVSSSIIITSG-----------LA- 72 (263)
T ss_dssp EECBTTTEETTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHH-TTTCCCCGGGEEEHH-----------HH-
T ss_pred EeCcCceEeCCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH-HCCCCCChhhEEecH-----------HH-
Confidence 45566444 344669999999999999999999999875333 23333 357765556677665 22
Q ss_pred HHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeE
Q psy6288 91 FLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSC 127 (166)
Q Consensus 91 ~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~ 127 (166)
....+++.. ...++.++|.. .....+++.|+..
T Consensus 73 ~~~~l~~~~---~~~~v~viG~~-~l~~~l~~~G~~~ 105 (263)
T 1zjj_A 73 TRLYMSKHL---DPGKIFVIGGE-GLVKEMQALGWGI 105 (263)
T ss_dssp HHHHHHHHS---CCCCEEEESCH-HHHHHHHHHTSCB
T ss_pred HHHHHHHhC---CCCEEEEEcCH-HHHHHHHHcCCee
Confidence 233334433 24678888874 5566777777743
No 157
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=96.74 E-value=0.017 Score=43.99 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=31.7
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhh
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSR 61 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~ 61 (166)
..++|++.++++.|+++|++++|+|++....++ .+..
T Consensus 142 ~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~-~~a~ 178 (327)
T 4as2_A 142 PRVFSGQRELYNKLMENGIEVYVISAAHEELVR-MVAA 178 (327)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHH-HHHT
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHH-HHHh
Confidence 468999999999999999999999999977664 4444
No 158
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=96.34 E-value=0.0018 Score=47.80 Aligned_cols=49 Identities=12% Similarity=0.097 Sum_probs=39.9
Q ss_pred CCCChHHHHHHHHHcCCCCCCCc--eEEEecCHhHHHHHHHcCCeEEEecCCC
Q psy6288 84 GKPAPDVFLVAAKRFDEKPQPSK--CLVFEDAPNGVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 84 ~Kp~~~~~~~~~~~~~~~~~~~~--~i~IGD~~~Di~~a~~~G~~~i~v~~~~ 134 (166)
.-++...++.+++.++. +++++ +++|||+.+|+.+.+.+|.. +.+.++.
T Consensus 187 ~~~K~~~l~~l~~~~~~-~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~ 237 (275)
T 1xvi_A 187 SAGKDQAANWIIATYQQ-LSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGLN 237 (275)
T ss_dssp TCCHHHHHHHHHHHHHH-HHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCCC
T ss_pred CCCHHHHHHHHHHHhhh-cccccCcEEEECCChhhHHHHHhCCce-EEecCCC
Confidence 34568899999998871 25777 99999999999999999984 7777764
No 159
>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A
Probab=96.26 E-value=0.085 Score=38.54 Aligned_cols=88 Identities=16% Similarity=0.169 Sum_probs=62.0
Q ss_pred HHHHHHH-CCCCEEEEeCCchhh-HHHHHhhhcCcccccc--eEEecCCCCCccCCCCChHHHHHHHHHcCCCCCCCceE
Q psy6288 33 LINHLHK-HNIPFAIATSSAKES-FELKTSRHKDTLKLFH--HVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCL 108 (166)
Q Consensus 33 ~l~~l~~-~g~~i~ivS~~~~~~-~~~~l~~~~gl~~~fd--~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i 108 (166)
+|..... .+..-++||++..-. +.+.++ +|+..+|. .|.++- .+ + +..-|+++.+++| ....-+
T Consensus 167 ~L~~i~sr~~~vNVLVTs~qLVPaLaK~LL--ygL~~~fpieNIYSa~---ki--G--KesCFerI~~RFG---~k~~yv 234 (274)
T 3geb_A 167 ALNLINSRPNCVNVLVTTTQLIPALAKVLL--YGLGSVFPIENIYSAT---KT--G--KESCFERIMQRFG---RKAVYV 234 (274)
T ss_dssp HHHHHHHSTTEEEEEEESSCHHHHHHHHHH--TTCTTTSCGGGEEETT---TT--C--HHHHHHHHHHHHC---TTSEEE
T ss_pred HHHhhccCCceeEEEEecCchHHHHHHHHH--hhcccceecccccchh---hc--C--HHHHHHHHHHHhC---CCceEE
Confidence 3444433 344556677665443 333333 58887774 677765 32 3 4899999999999 457788
Q ss_pred EEecCHhHHHHHHHcCCeEEEecC
Q psy6288 109 VFEDAPNGVLGAKAAGMSCVMVPD 132 (166)
Q Consensus 109 ~IGD~~~Di~~a~~~G~~~i~v~~ 132 (166)
+|||+...=++|+..+++..-|..
T Consensus 235 vIGDG~eEe~AAk~~n~PFwrI~~ 258 (274)
T 3geb_A 235 VIGDGVEEEQGAKKHNMPFWRISC 258 (274)
T ss_dssp EEESSHHHHHHHHHTTCCEEECCS
T ss_pred EECCCHHHHHHHHHcCCCeEEeec
Confidence 899999999999999999988854
No 160
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=96.10 E-value=0.00073 Score=51.47 Aligned_cols=98 Identities=10% Similarity=0.003 Sum_probs=63.1
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccccc--ceEEecCCCCCcc----CCCCChHHHHHHHHHc
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLF--HHVVLGSADPEVK----QGKPAPDVFLVAAKRF 98 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~f--d~v~~~~~~~~~~----~~Kp~~~~~~~~~~~~ 98 (166)
..+||+.+||+++.+ +|.++|.|.+....+...+ +.++....+ ...+..+ .+. ..+.....|.+-++++
T Consensus 164 ~~RP~l~eFL~~l~~-~yeivIfTas~~~ya~~vl-d~Ld~~~~~~~~~~~~r~---~~~~~~~~~~~~g~~~vKdLs~L 238 (320)
T 3shq_A 164 LMRPYLHEFLTSAYE-DYDIVIWSATSMRWIEEKM-RLLGVASNDNYKVMFYLD---STAMISVHVPERGVVDVKPLGVI 238 (320)
T ss_dssp HBCTTHHHHHHHHHH-HEEEEEECSSCHHHHHHHH-HHTTCTTCSSCCCCEEEC---GGGCEEEEETTTEEEEECCHHHH
T ss_pred EeCCCHHHHHHHHHh-CCEEEEEcCCcHHHHHHHH-HHhCCCCCcceeEEEEEc---CCccccccccCCCCEEEEEhHHh
Confidence 468999999999996 5999999999987775444 545655443 2111111 111 0111122244445555
Q ss_pred -----CCCCCCCceEEEecCHhHHHHHHHcCCeEEE
Q psy6288 99 -----DEKPQPSKCLVFEDAPNGVLGAKAAGMSCVM 129 (166)
Q Consensus 99 -----~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~ 129 (166)
| .+.+++++|.|++.-.......|+....
T Consensus 239 w~~~p~--rdl~~tIiIDdsp~~~~~~p~NgI~I~~ 272 (320)
T 3shq_A 239 WALYKQ--YNSSNTIMFDDIRRNFLMNPKSGLKIRP 272 (320)
T ss_dssp HHHCTT--CCGGGEEEEESCGGGGTTSGGGEEECCC
T ss_pred hcccCC--CChhHEEEEeCChHHhccCcCceEEeCe
Confidence 7 8999999999999877666666655443
No 161
>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}
Probab=95.86 E-value=0.0047 Score=48.90 Aligned_cols=79 Identities=16% Similarity=0.241 Sum_probs=57.4
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccc-ccce-EEecCCCCCccCCCCChHHHHHHHHH-cCC
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLK-LFHH-VVLGSADPEVKQGKPAPDVFLVAAKR-FDE 100 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~-~fd~-v~~~~~~~~~~~~Kp~~~~~~~~~~~-~~~ 100 (166)
...+||+.+||+++.+ +|.++|.|.+...-+. .+.+.++... +|.. +++-+ +++. .+.+-+++ ++
T Consensus 82 V~~RPgl~eFL~~ls~-~yEivIfTas~~~YA~-~Vl~~LDp~~~~f~~Rl~sRd---~cg~------~~~KdL~~ll~- 149 (442)
T 3ef1_A 82 IKFRPGLAQFLQKISE-LYELHIYTMGTKAYAK-EVAKIIDPTGKLFQDRVLSRD---DSGS------LAQKSLRRLFP- 149 (442)
T ss_dssp EEECTTHHHHHHHHTT-TEEEEEECSSCHHHHH-HHHHHHCTTSTTTTTCEECTT---TSSC------SSCCCGGGTCS-
T ss_pred EEeCCCHHHHHHHHhC-CcEEEEEcCCCHHHHH-HHHHHhccCCccccceEEEec---CCCC------ceeeehHHhcC-
Confidence 5679999999999995 6999999999977664 4556567665 6776 55444 4331 12233454 37
Q ss_pred CCCCCceEEEecCHh
Q psy6288 101 KPQPSKCLVFEDAPN 115 (166)
Q Consensus 101 ~~~~~~~i~IGD~~~ 115 (166)
.+.+++++|.|++.
T Consensus 150 -rdl~~vvIIDd~p~ 163 (442)
T 3ef1_A 150 -CDTSMVVVIDDRGD 163 (442)
T ss_dssp -SCCTTEEEEESCSG
T ss_pred -CCcceEEEEECCHH
Confidence 89999999999984
No 162
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=95.85 E-value=0.0053 Score=44.91 Aligned_cols=57 Identities=7% Similarity=-0.065 Sum_probs=42.4
Q ss_pred ChHHHHHHHHHcCCCCCCCceEEEec----CHhHHHHHHHcCCeEEEecCCCCCcccccccchhhCCh
Q psy6288 87 APDVFLVAAKRFDEKPQPSKCLVFED----APNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSL 150 (166)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~i~IGD----~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~ 150 (166)
+...++.+ ++ +++++++.||| +.+|+.+.+.+|...+.+... .......+++++.+.
T Consensus 198 Kg~al~~l---~g--i~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA--~~~~k~~a~~v~~~~ 258 (262)
T 2fue_A 198 KRYCLDSL---DQ--DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSP--QDTVQRCREIFFPET 258 (262)
T ss_dssp TTHHHHHH---TT--SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSH--HHHHHHHHHHHCTTC
T ss_pred HHHHHHHH---HC--CCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCC--CHHHHHhhheeCCCC
Confidence 46677777 88 89999999999 999999999999877888322 223445556665543
No 163
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=95.34 E-value=0.23 Score=35.83 Aligned_cols=61 Identities=16% Similarity=0.239 Sum_probs=40.6
Q ss_pred HhhhhhhhcC-CccchhHHHHHHHHHHCCCCEEEEeCC---chhhHHHHHhhhcCcccccceEEec
Q psy6288 14 IFDMDGLLLG-YNLAIGALRLINHLHKHNIPFAIATSS---AKESFELKTSRHKDTLKLFHHVVLG 75 (166)
Q Consensus 14 ~~~~~~~~~~-~~~~~g~~~~l~~l~~~g~~i~ivS~~---~~~~~~~~l~~~~gl~~~fd~v~~~ 75 (166)
..|+++.+.. ..+.|++.++|++|+++|++++++||+ +...+...+.+ +|+....+.++++
T Consensus 10 ~~DlDGTLl~~~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~-lg~~~~~~~ii~~ 74 (266)
T 3pdw_A 10 LIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVS-FDIPATEEQVFTT 74 (266)
T ss_dssp EEECSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHH-TTCCCCGGGEEEH
T ss_pred EEeCcCceEeCCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCCHHHccCH
Confidence 3455664433 346789999999999999999999994 33444444433 5776544555543
No 164
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=94.74 E-value=0.018 Score=42.99 Aligned_cols=65 Identities=20% Similarity=0.269 Sum_probs=44.4
Q ss_pred HHHHHhhhhhhhc-CCccchhHHHHHHHHHHCCCCEEEEeCC---chhhHHHHHhhhcCcc-cccceEEec
Q psy6288 10 VTHVIFDMDGLLL-GYNLAIGALRLINHLHKHNIPFAIATSS---AKESFELKTSRHKDTL-KLFHHVVLG 75 (166)
Q Consensus 10 ~~~~~~~~~~~~~-~~~~~~g~~~~l~~l~~~g~~i~ivS~~---~~~~~~~~l~~~~gl~-~~fd~v~~~ 75 (166)
++.+..|+++.+. ...+.|++.++|+.|++.|++++++||+ +.......+. .+|+. ...+.++++
T Consensus 21 ~k~i~~D~DGTL~~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~-~~g~~~~~~~~i~~~ 90 (306)
T 2oyc_A 21 AQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFA-RLGFGGLRAEQLFSS 90 (306)
T ss_dssp CSEEEECSBTTTEETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHH-HTTCCSCCGGGEEEH
T ss_pred CCEEEECCCCcEecCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHH-hcCCCcCChhhEEcH
Confidence 3346677787554 4568899999999999999999999974 3344444443 35765 334455543
No 165
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=94.71 E-value=0.054 Score=36.15 Aligned_cols=37 Identities=14% Similarity=0.164 Sum_probs=29.4
Q ss_pred hhhhhhhcCC------ccchhHHHHHHHHHHCCCCEEEEeCCc
Q psy6288 15 FDMDGLLLGY------NLAIGALRLINHLHKHNIPFAIATSSA 51 (166)
Q Consensus 15 ~~~~~~~~~~------~~~~g~~~~l~~l~~~g~~i~ivS~~~ 51 (166)
.|+++.+... .+.|++.++|+.|+++|+.++++|+.+
T Consensus 8 ~DlDGTL~~~~~~~i~~~~~~~~~al~~l~~~G~~iii~TgR~ 50 (142)
T 2obb_A 8 VDFDGTIVEHRYPRIGEEIPFAVETLKLLQQEKHRLILWSVRE 50 (142)
T ss_dssp ECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHTTCEEEECCSCC
T ss_pred EECcCCCCCCCCccccccCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3556644431 356899999999999999999999987
No 166
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=93.71 E-value=0.28 Score=34.42 Aligned_cols=90 Identities=7% Similarity=-0.016 Sum_probs=54.1
Q ss_pred hhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCCCce
Q psy6288 28 IGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKC 107 (166)
Q Consensus 28 ~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 107 (166)
-++..+|..+++.+-++++++-.....-...+.+.+|+.-.+ ..+... +-.+..++++. ...--
T Consensus 81 ~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i~~-~~~~~~------------~e~~~~i~~l~---~~G~~ 144 (196)
T 2q5c_A 81 FDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKIKE-FLFSSE------------DEITTLISKVK---TENIK 144 (196)
T ss_dssp HHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEEEE-EEECSG------------GGHHHHHHHHH---HTTCC
T ss_pred hHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCceEE-EEeCCH------------HHHHHHHHHHH---HCCCe
Confidence 345566666677777999999665443334555555553221 111111 11233444443 12234
Q ss_pred EEEecCHhHHHHHHHcCCeEEEecCCC
Q psy6288 108 LVFEDAPNGVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 108 i~IGD~~~Di~~a~~~G~~~i~v~~~~ 134 (166)
++|||+.. ...|++.|++++++..|.
T Consensus 145 vvVG~~~~-~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 145 IVVSGKTV-TDEAIKQGLYGETINSGE 170 (196)
T ss_dssp EEEECHHH-HHHHHHTTCEEEECCCCH
T ss_pred EEECCHHH-HHHHHHcCCcEEEEecCH
Confidence 58999887 889999999999998764
No 167
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=93.36 E-value=0.17 Score=37.15 Aligned_cols=61 Identities=13% Similarity=0.068 Sum_probs=42.6
Q ss_pred HhhhhhhhcC--CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEec
Q psy6288 14 IFDMDGLLLG--YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLG 75 (166)
Q Consensus 14 ~~~~~~~~~~--~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~ 75 (166)
..|+++.+.. ..+-+...++|++|+++|++++++|+.+...+...+ +.+++..+.+.++++
T Consensus 9 ~~DlDGTLl~~~~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~-~~l~l~~~~~~~I~~ 71 (282)
T 1rkq_A 9 AIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYL-KELHMEQPGDYCITY 71 (282)
T ss_dssp EECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHH-HHTTCCSTTCEEEEG
T ss_pred EEeCCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHhCCCCCCCeEEEe
Confidence 3456665542 456788999999999999999999999987775554 445765432334443
No 168
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=93.21 E-value=0.17 Score=36.63 Aligned_cols=44 Identities=18% Similarity=0.086 Sum_probs=34.4
Q ss_pred hhhhhhhcC--CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHH
Q psy6288 15 FDMDGLLLG--YNLAIGALRLINHLHKHNIPFAIATSSAKESFELK 58 (166)
Q Consensus 15 ~~~~~~~~~--~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~ 58 (166)
.|+++.+.. ..+-+...++|++|+++|++++++|+.+...+...
T Consensus 9 ~DlDGTLl~~~~~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~~~~~ 54 (246)
T 3f9r_A 9 FDVDGTLTPPRLCQTDEMRALIKRARGAGFCVGTVGGSDFAKQVEQ 54 (246)
T ss_dssp ECSBTTTBSTTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHH
T ss_pred EeCcCCcCCCCCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH
Confidence 456665542 35778999999999999999999999997755433
No 169
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=92.77 E-value=0.44 Score=34.24 Aligned_cols=86 Identities=9% Similarity=-0.008 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCCCceE
Q psy6288 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCL 108 (166)
Q Consensus 29 g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i 108 (166)
++..+|..+++.+-++++++-.....-...+.+.+|+.- ....... ++-.+..++++. ...--+
T Consensus 94 Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i--~~~~~~~-----------~ee~~~~i~~l~---~~G~~v 157 (225)
T 2pju_A 94 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRL--DQRSYIT-----------EEDARGQINELK---ANGTEA 157 (225)
T ss_dssp HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCE--EEEEESS-----------HHHHHHHHHHHH---HTTCCE
T ss_pred HHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCce--EEEEeCC-----------HHHHHHHHHHHH---HCCCCE
Confidence 334445555555678999997654433345555555532 1111111 333445555553 223446
Q ss_pred EEecCHhHHHHHHHcCCeEEEec
Q psy6288 109 VFEDAPNGVLGAKAAGMSCVMVP 131 (166)
Q Consensus 109 ~IGD~~~Di~~a~~~G~~~i~v~ 131 (166)
+|||+.. ...|++.|++++++.
T Consensus 158 VVG~~~~-~~~A~~~Gl~~vlI~ 179 (225)
T 2pju_A 158 VVGAGLI-TDLAEEAGMTGIFIY 179 (225)
T ss_dssp EEESHHH-HHHHHHTTSEEEESS
T ss_pred EECCHHH-HHHHHHcCCcEEEEC
Confidence 8999887 889999999999997
No 170
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=92.52 E-value=0.16 Score=32.79 Aligned_cols=29 Identities=10% Similarity=0.197 Sum_probs=25.9
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchh
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKE 53 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~ 53 (166)
.+.+++.++|++|++.|++++++|+.+..
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence 36689999999999999999999999754
No 171
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=92.16 E-value=0.22 Score=36.40 Aligned_cols=53 Identities=19% Similarity=0.208 Sum_probs=39.1
Q ss_pred HhhhhhhhcC--CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccc
Q psy6288 14 IFDMDGLLLG--YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLK 67 (166)
Q Consensus 14 ~~~~~~~~~~--~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~ 67 (166)
..|+++.+.. ..+.+...++|++|+++|++++++|+.+...+...+ +.+++..
T Consensus 13 ~~DlDGTLl~~~~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~~ 67 (275)
T 1xvi_A 13 FSDLDGTLLDSHSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQ-KTLGLQG 67 (275)
T ss_dssp EEECTTTTSCSSCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHH-HHTTCTT
T ss_pred EEeCCCCCCCCCCcCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCCC
Confidence 3466775543 345577899999999999999999999988775554 4456643
No 172
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=92.05 E-value=0.25 Score=35.62 Aligned_cols=61 Identities=25% Similarity=0.317 Sum_probs=40.5
Q ss_pred HHhhhhhhhc-CCccchhHHHHHHHHHHCCCCEEEEeCC---chhhHHHHHhhhcCcccccceEEe
Q psy6288 13 VIFDMDGLLL-GYNLAIGALRLINHLHKHNIPFAIATSS---AKESFELKTSRHKDTLKLFHHVVL 74 (166)
Q Consensus 13 ~~~~~~~~~~-~~~~~~g~~~~l~~l~~~g~~i~ivS~~---~~~~~~~~l~~~~gl~~~fd~v~~ 74 (166)
+..|+++.+. ...+.|++.++|++|++.|++++++||+ +...+...+. .+|+...-+.+++
T Consensus 20 v~~DlDGTLl~~~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~-~lg~~~~~~~ii~ 84 (271)
T 1vjr_A 20 FILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLR-NMGVDVPDDAVVT 84 (271)
T ss_dssp EEECCBTTTEETTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHH-HTTCCCCGGGEEE
T ss_pred EEEcCcCcEEeCCEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHH-HcCCCCChhhEEc
Confidence 4456667544 4567899999999999999999999965 4444444443 3566433233444
No 173
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=91.42 E-value=0.42 Score=34.60 Aligned_cols=62 Identities=16% Similarity=0.146 Sum_probs=39.4
Q ss_pred HHhhhhhhhcC--CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEec
Q psy6288 13 VIFDMDGLLLG--YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLG 75 (166)
Q Consensus 13 ~~~~~~~~~~~--~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~ 75 (166)
+..|+++.+.. ..+.+...++|++|+++|++++++|+.+...+...+ +.+|+....+.+++.
T Consensus 8 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~~~~~~~i~~ 71 (279)
T 3mpo_A 8 IAIDIDGTLLNEKNELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYL-DAMDIDGDDQYAITF 71 (279)
T ss_dssp EEECC-----------CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCCSSSCEEEEG
T ss_pred EEEcCcCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCCCCCEEEEc
Confidence 34566775543 457788999999999999999999999988775544 445775433444444
No 174
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=90.96 E-value=0.27 Score=35.16 Aligned_cols=26 Identities=12% Similarity=0.212 Sum_probs=21.3
Q ss_pred eEEEecCHhHHHHHHHc--CCeEEEecCC
Q psy6288 107 CLVFEDAPNGVLGAKAA--GMSCVMVPDP 133 (166)
Q Consensus 107 ~i~IGD~~~Di~~a~~~--G~~~i~v~~~ 133 (166)
++.|||+.+|+.+-+.+ |.. +.+...
T Consensus 174 via~GD~~ND~~Ml~~a~~g~~-vam~Na 201 (239)
T 1u02_A 174 AIIAGDDATDEAAFEANDDALT-IKVGEG 201 (239)
T ss_dssp EEEEESSHHHHHHHHTTTTSEE-EEESSS
T ss_pred eEEEeCCCccHHHHHHhhCCcE-EEECCC
Confidence 99999999999999998 764 455444
No 175
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=90.91 E-value=0.6 Score=33.77 Aligned_cols=53 Identities=11% Similarity=0.209 Sum_probs=40.6
Q ss_pred HHhhhhhhhcC--CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcc
Q psy6288 13 VIFDMDGLLLG--YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTL 66 (166)
Q Consensus 13 ~~~~~~~~~~~--~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~ 66 (166)
+..|+++.+.. ..+.+...++|++++++|++++++|+.+...+...+ +.+++.
T Consensus 8 i~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~ 62 (279)
T 4dw8_A 8 IVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLA-NELRMN 62 (279)
T ss_dssp EEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTGG
T ss_pred EEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-HHhCCC
Confidence 34566775543 457899999999999999999999999988775554 445774
No 176
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=90.71 E-value=0.34 Score=36.00 Aligned_cols=47 Identities=17% Similarity=0.220 Sum_probs=36.6
Q ss_pred HHhhhhhhhcC---CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHH
Q psy6288 13 VIFDMDGLLLG---YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKT 59 (166)
Q Consensus 13 ~~~~~~~~~~~---~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l 59 (166)
+..|+++.+.. ..+-+...++|++|+++|++++++|+.+...+...+
T Consensus 30 i~~DlDGTLl~~~~~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~ 79 (301)
T 2b30_A 30 LLIDFDGTLFVDKDIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAF 79 (301)
T ss_dssp EEEETBTTTBCCTTTCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHH
T ss_pred EEEECCCCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHh
Confidence 34567775553 346788999999999999999999999987765444
No 177
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=90.63 E-value=0.53 Score=33.32 Aligned_cols=52 Identities=21% Similarity=0.182 Sum_probs=39.0
Q ss_pred HhhhhhhhcC--CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcc
Q psy6288 14 IFDMDGLLLG--YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTL 66 (166)
Q Consensus 14 ~~~~~~~~~~--~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~ 66 (166)
..|+++.+.. ..+.+...++|++|+++|++++++|+.+...+...+ +.+|+.
T Consensus 7 ~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~-~~l~~~ 60 (231)
T 1wr8_A 7 SIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAAS-ILIGTS 60 (231)
T ss_dssp EEESTTTTBCTTSCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHH-HHHTCC
T ss_pred EEECCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHH-HHcCCC
Confidence 4567775543 456789999999999999999999999877665444 434654
No 178
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=90.42 E-value=0.12 Score=37.09 Aligned_cols=41 Identities=12% Similarity=-0.059 Sum_probs=31.4
Q ss_pred hHHHHHHHHHcCCCCCCCceEEEec----CHhHHHHHHHcCCeEEEecCC
Q psy6288 88 PDVFLVAAKRFDEKPQPSKCLVFED----APNGVLGAKAAGMSCVMVPDP 133 (166)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~i~IGD----~~~Di~~a~~~G~~~i~v~~~ 133 (166)
...++.+ ++ +++++++.||| +.+|+.+.+.+|...+.+...
T Consensus 190 g~al~~l---~~--i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na 234 (246)
T 2amy_A 190 RYCLRHV---EN--DGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAP 234 (246)
T ss_dssp GGGGGGT---TT--SCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSH
T ss_pred HHHHHHH---hC--CCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCC
Confidence 4455555 77 89999999999 999999999999877777543
No 179
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=89.86 E-value=0.36 Score=34.69 Aligned_cols=50 Identities=16% Similarity=0.145 Sum_probs=34.8
Q ss_pred hhhhhhcCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcc
Q psy6288 16 DMDGLLLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTL 66 (166)
Q Consensus 16 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~ 66 (166)
|+++.+......+...++|++|+++|++++++|+.+...+...+ +.+++.
T Consensus 8 DlDGTLl~~~~~~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~-~~~~~~ 57 (249)
T 2zos_A 8 DIDKTLIPGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYR-KELEVE 57 (249)
T ss_dssp CCSTTTCTTSCSGGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHH-HHHTCC
T ss_pred eCCCCccCCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCC
Confidence 45554332122245899999999999999999999987765544 335664
No 180
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=88.40 E-value=0.59 Score=34.13 Aligned_cols=54 Identities=24% Similarity=0.166 Sum_probs=40.5
Q ss_pred HHhhhhhhhcC--CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccc
Q psy6288 13 VIFDMDGLLLG--YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLK 67 (166)
Q Consensus 13 ~~~~~~~~~~~--~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~ 67 (166)
+..|+++.+.. ..+-+...++|++|+++|++++++|+.+...+...+ +.+|+..
T Consensus 24 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~-~~l~~~~ 79 (285)
T 3pgv_A 24 VASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIR-DNLGIRS 79 (285)
T ss_dssp EEEECCCCCSCTTSCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHH-HHHCSCC
T ss_pred EEEeCcCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HhcCCCc
Confidence 34566665543 457788999999999999999999999988775444 4457653
No 181
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=87.79 E-value=2.5 Score=30.45 Aligned_cols=86 Identities=14% Similarity=0.077 Sum_probs=51.7
Q ss_pred HHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHH----HcCCCCCCCc
Q psy6288 31 LRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAK----RFDEKPQPSK 106 (166)
Q Consensus 31 ~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~----~~~~~~~~~~ 106 (166)
.++++++++.+.+++++|+...........+. |-.+|+ .||.+..+..+.. .+. ...-+
T Consensus 64 ~~~~~~lr~~~~pvi~lt~~~~~~~~~~a~~~-Ga~dyl--------------~Kp~~~~~~~~~~~~~~~~~--~~~~~ 126 (259)
T 3luf_A 64 GEAVKVLLERGLPVVILTADISEDKREAWLEA-GVLDYV--------------MKDSRHSLQYAVGLVHRLYL--NQQIE 126 (259)
T ss_dssp SHHHHHHHHTTCCEEEEECC-CHHHHHHHHHT-TCCEEE--------------ECSSHHHHHHHHHHHHHHHH--HTTCE
T ss_pred HHHHHHHHhCCCCEEEEEccCCHHHHHHHHHC-CCcEEE--------------eCCchhHHHHHHHhhhhHhh--cCCCc
Confidence 46888898889999999998765544444443 665544 3555443332222 222 24678
Q ss_pred eEEEecCHhHHHHHH----HcCCeEEEecCC
Q psy6288 107 CLVFEDAPNGVLGAK----AAGMSCVMVPDP 133 (166)
Q Consensus 107 ~i~IGD~~~Di~~a~----~~G~~~i~v~~~ 133 (166)
+++|+|......... ..|+....+..+
T Consensus 127 ILivDD~~~~~~~l~~~L~~~~~~v~~a~~~ 157 (259)
T 3luf_A 127 VLVVDDSRTSRHRTMAQLRKQLLQVHEASHA 157 (259)
T ss_dssp EEEECSCHHHHHHHHHHHHTTTCEEEEESSH
T ss_pred EEEEeCCHHHHHHHHHHHHHcCcEEEEeCCH
Confidence 999999875444332 346666555544
No 182
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=87.68 E-value=0.86 Score=33.22 Aligned_cols=53 Identities=17% Similarity=0.136 Sum_probs=39.9
Q ss_pred HHhhhhhhhcC--C-ccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcc
Q psy6288 13 VIFDMDGLLLG--Y-NLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTL 66 (166)
Q Consensus 13 ~~~~~~~~~~~--~-~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~ 66 (166)
+..|+++.+-. . .+-+...++|++|+++|++++++|+.+...+...+ +.+++.
T Consensus 24 i~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~-~~l~~~ 79 (283)
T 3dao_A 24 IATDIDGTLVKDGSLLIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLF-APIKHK 79 (283)
T ss_dssp EEECCBTTTBSTTCSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHT-GGGGGG
T ss_pred EEEeCcCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCC
Confidence 34567776553 3 57799999999999999999999999987765444 334543
No 183
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=86.44 E-value=1.1 Score=32.81 Aligned_cols=53 Identities=15% Similarity=0.190 Sum_probs=39.5
Q ss_pred HhhhhhhhcC--CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccc
Q psy6288 14 IFDMDGLLLG--YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLK 67 (166)
Q Consensus 14 ~~~~~~~~~~--~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~ 67 (166)
..|+++.+.. ..+.+...++|++|++.|++++++|+.+...+...+ +.+++..
T Consensus 8 ~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~~ 62 (288)
T 1nrw_A 8 AIDLDGTLLNSKHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIF-EPLGIKT 62 (288)
T ss_dssp EEECCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-GGGTCCC
T ss_pred EEeCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCCC
Confidence 4566775543 456788999999999999999999999988775554 4456543
No 184
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=86.34 E-value=0.58 Score=33.42 Aligned_cols=43 Identities=28% Similarity=0.301 Sum_probs=33.0
Q ss_pred hhhhhhhcC-------CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHH
Q psy6288 15 FDMDGLLLG-------YNLAIGALRLINHLHKHNIPFAIATSSAKESFELK 58 (166)
Q Consensus 15 ~~~~~~~~~-------~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~ 58 (166)
.|+++.+.. ..+-+...++|++|+++| +++++|+.+...+...
T Consensus 6 ~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~ 55 (239)
T 1u02_A 6 LDYDGTLVPIIMNPEESYADAGLLSLISDLKERF-DTYIVTGRSPEEISRF 55 (239)
T ss_dssp EECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHH
T ss_pred EecCCCCcCCCCCcccCCCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHH
Confidence 355665543 256788999999999999 9999999997766443
No 185
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=83.91 E-value=1.3 Score=32.07 Aligned_cols=53 Identities=19% Similarity=0.212 Sum_probs=40.4
Q ss_pred HHhhhhhhhcC--CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcc
Q psy6288 13 VIFDMDGLLLG--YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTL 66 (166)
Q Consensus 13 ~~~~~~~~~~~--~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~ 66 (166)
+..|+++.+.. ..+.+...++|++|+++|+.++++|+.+...+. .+.+.+|+.
T Consensus 9 i~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~-~~~~~~~~~ 63 (290)
T 3dnp_A 9 LALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQ-KIAKSLKLD 63 (290)
T ss_dssp EEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHH-HHHHHTTCC
T ss_pred EEEcCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHH-HHHHHcCCC
Confidence 34567775543 457889999999999999999999999987774 444445765
No 186
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=83.26 E-value=1.8 Score=30.77 Aligned_cols=52 Identities=29% Similarity=0.400 Sum_probs=38.4
Q ss_pred HhhhhhhhcC--CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcc
Q psy6288 14 IFDMDGLLLG--YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTL 66 (166)
Q Consensus 14 ~~~~~~~~~~--~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~ 66 (166)
..|+++.+-. ..+.+...++|++++++|++++++|+.+...+...+.+ +++.
T Consensus 7 ~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~-l~~~ 60 (258)
T 2pq0_A 7 FFDIDGTLLDEQKQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQ-LGID 60 (258)
T ss_dssp EECTBTTTBCTTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHH-HTCC
T ss_pred EEeCCCCCcCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHh-cCCC
Confidence 3567775553 34678899999999999999999999987766544433 4543
No 187
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=81.54 E-value=0.95 Score=32.76 Aligned_cols=42 Identities=24% Similarity=0.308 Sum_probs=31.5
Q ss_pred hhhhhhhcC--Cccchh-HHHHHHHHHHCCCCEEEEeCCchhhHH
Q psy6288 15 FDMDGLLLG--YNLAIG-ALRLINHLHKHNIPFAIATSSAKESFE 56 (166)
Q Consensus 15 ~~~~~~~~~--~~~~~g-~~~~l~~l~~~g~~i~ivS~~~~~~~~ 56 (166)
.|+++.+.. ..+-+. +.++|++|+++|++++++|+.+...+.
T Consensus 8 ~DlDGTLl~~~~~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~ 52 (271)
T 1rlm_A 8 TDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLI 52 (271)
T ss_dssp ECCCCCCSCTTSCCCHHHHHHHHHHHHHHTCEEEEECSSCHHHHG
T ss_pred EeCCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeCCcHHHHH
Confidence 456665443 335556 489999999999999999999977553
No 188
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=81.52 E-value=2.3 Score=30.35 Aligned_cols=63 Identities=19% Similarity=0.269 Sum_probs=41.7
Q ss_pred HHhhhhhhhcC-CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHH---HHhhhcCcccccceEEec
Q psy6288 13 VIFDMDGLLLG-YNLAIGALRLINHLHKHNIPFAIATSSAKESFEL---KTSRHKDTLKLFHHVVLG 75 (166)
Q Consensus 13 ~~~~~~~~~~~-~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~---~l~~~~gl~~~fd~v~~~ 75 (166)
++.|+++.+.. ....+++.++++.|++.|+++.++||........ .+.+.+|+....+.++++
T Consensus 8 v~fDlDGTL~~~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 74 (264)
T 1yv9_A 8 YLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTA 74 (264)
T ss_dssp EEECCBTTTEETTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEH
T ss_pred EEEeCCCeEEeCCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCChhhEEcH
Confidence 45667776653 4467899999999999999999999986544322 232325665433444443
No 189
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=81.05 E-value=2.4 Score=29.88 Aligned_cols=53 Identities=17% Similarity=0.226 Sum_probs=35.8
Q ss_pred HHhhhhhhhcC-CccchhHHHHHHHHHHCCCCEEEEeCCc---hhhHHHHHhhhcCcc
Q psy6288 13 VIFDMDGLLLG-YNLAIGALRLINHLHKHNIPFAIATSSA---KESFELKTSRHKDTL 66 (166)
Q Consensus 13 ~~~~~~~~~~~-~~~~~g~~~~l~~l~~~g~~i~ivS~~~---~~~~~~~l~~~~gl~ 66 (166)
++.|+++.+.+ ....+++.++++.|++.|+++.++||.. .......+.+ +|+.
T Consensus 10 i~fDlDGTLld~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~-~g~~ 66 (259)
T 2ho4_A 10 VLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKK-LEFE 66 (259)
T ss_dssp EEEESSSSSCC---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHH-TTCC
T ss_pred EEEeCcCcEEeCCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHH-cCCC
Confidence 45667775553 4567899999999999999999999664 2333344433 4554
No 190
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=80.80 E-value=2 Score=30.95 Aligned_cols=51 Identities=20% Similarity=0.144 Sum_probs=36.8
Q ss_pred hhhhhhhcC--CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccc
Q psy6288 15 FDMDGLLLG--YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLK 67 (166)
Q Consensus 15 ~~~~~~~~~--~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~ 67 (166)
.|+++.+.. ..+-+...++|++ +++|++++++|+.+...+...+ +.+|+..
T Consensus 7 ~DlDGTLl~~~~~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~-~~l~~~~ 59 (268)
T 1nf2_A 7 FDLDGTLLNDNLEISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVE-KKYFKRT 59 (268)
T ss_dssp EECCCCCSCTTSCCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHH-HHHSSSC
T ss_pred EeCCCcCCCCCCccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHH-HHhCCCC
Confidence 355664442 3466788999999 9999999999999987765444 3356643
No 191
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=80.43 E-value=1.7 Score=31.01 Aligned_cols=52 Identities=21% Similarity=0.255 Sum_probs=39.1
Q ss_pred HhhhhhhhcC--CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcc
Q psy6288 14 IFDMDGLLLG--YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTL 66 (166)
Q Consensus 14 ~~~~~~~~~~--~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~ 66 (166)
..|+++.+.. ..+.+...++|++++++|+.++++|+.+...+...+.+ +++.
T Consensus 9 ~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~-~~~~ 62 (274)
T 3fzq_A 9 ILDIDGTLRDEVYGIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLS-LGVD 62 (274)
T ss_dssp EECSBTTTBBTTTBCCHHHHHHHHHHHHTTCEEEEECSSCTTTSCHHHHT-TCCS
T ss_pred EEECCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHH-cCCC
Confidence 4567776553 35788999999999999999999999987766544433 4553
No 192
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=79.84 E-value=2.1 Score=30.60 Aligned_cols=41 Identities=22% Similarity=0.464 Sum_probs=32.5
Q ss_pred HhhhhhhhcC--Cc-cchhHHHHHHHHHHCCCCEEEEeCCchhhH
Q psy6288 14 IFDMDGLLLG--YN-LAIGALRLINHLHKHNIPFAIATSSAKESF 55 (166)
Q Consensus 14 ~~~~~~~~~~--~~-~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~ 55 (166)
..|+++.+.. .. +.+...++|++|+++|++++++|+.+ ..+
T Consensus 6 ~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~ 49 (261)
T 2rbk_A 6 FFDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRP-KAI 49 (261)
T ss_dssp EECSBTTTBCTTTSSCCHHHHHHHHHHHHTTCEEEEECSSC-GGG
T ss_pred EEeCCCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEECCCh-HHH
Confidence 3466776553 23 66889999999999999999999998 655
No 193
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=79.56 E-value=2.5 Score=29.77 Aligned_cols=54 Identities=15% Similarity=0.290 Sum_probs=38.1
Q ss_pred HHHhhhhhhhcCC-----ccchhHHHHHHHHHHCCCCEEEEe---CCchhhHHHHHhhhcCcc
Q psy6288 12 HVIFDMDGLLLGY-----NLAIGALRLINHLHKHNIPFAIAT---SSAKESFELKTSRHKDTL 66 (166)
Q Consensus 12 ~~~~~~~~~~~~~-----~~~~g~~~~l~~l~~~g~~i~ivS---~~~~~~~~~~l~~~~gl~ 66 (166)
-++.|+++.+... .+.++..++++.+++.|+++.++| +.....+...+.+ +|+.
T Consensus 14 ~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~-~g~~ 75 (271)
T 2x4d_A 14 GVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQR-LGFD 75 (271)
T ss_dssp EEEECCBTTTEECCTTTCEECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHH-TTCC
T ss_pred EEEEeCCCeEEecCCCCCccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHH-CCCC
Confidence 3566777766543 277899999999999999999999 4454444444443 4554
No 194
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=78.40 E-value=1.9 Score=30.88 Aligned_cols=42 Identities=24% Similarity=0.309 Sum_probs=32.2
Q ss_pred hhhhhhhcC-CccchhHHHHHHHHHHCCCCEEEEeCCchhhHH
Q psy6288 15 FDMDGLLLG-YNLAIGALRLINHLHKHNIPFAIATSSAKESFE 56 (166)
Q Consensus 15 ~~~~~~~~~-~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~ 56 (166)
.|+++.+.. ..+.+.+.++|++|+++|++++++|+.+...+.
T Consensus 5 ~DlDGTLl~~~~i~~~~~~al~~l~~~Gi~v~iaTGR~~~~~~ 47 (259)
T 3zx4_A 5 TDLDGTLLDERGELGPAREALERLRALGVPVVPVTAKTRKEVE 47 (259)
T ss_dssp ECCCCCCSCSSSSCSTTHHHHHHHHHTTCCEEEBCSSCHHHHH
T ss_pred EeCCCCCcCCCcCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHH
Confidence 345554332 156788899999999999999999999977664
No 195
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=77.89 E-value=1.4 Score=31.68 Aligned_cols=30 Identities=13% Similarity=-0.082 Sum_probs=26.2
Q ss_pred CCCceEEEecC----HhHHHHHHHcCCeEEEecC
Q psy6288 103 QPSKCLVFEDA----PNGVLGAKAAGMSCVMVPD 132 (166)
Q Consensus 103 ~~~~~i~IGD~----~~Di~~a~~~G~~~i~v~~ 132 (166)
++++++.|||+ .+|+.+-+.+|...+.|..
T Consensus 198 ~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n 231 (246)
T 3f9r_A 198 DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTS 231 (246)
T ss_dssp TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSS
T ss_pred CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCC
Confidence 58999999996 9999999999887777754
No 196
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=77.66 E-value=18 Score=26.45 Aligned_cols=95 Identities=11% Similarity=0.064 Sum_probs=62.1
Q ss_pred ccchhHHHHHHHH---HHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEe-cCCCCCccC--CCCChHHHHHHHHHc
Q psy6288 25 NLAIGALRLINHL---HKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVL-GSADPEVKQ--GKPAPDVFLVAAKRF 98 (166)
Q Consensus 25 ~~~~g~~~~l~~l---~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~-~~~~~~~~~--~Kp~~~~~~~~~~~~ 98 (166)
.++|+..+.++.. .+.|+.+..+++.+.... +.+.+ +|- +.+.. +. ..+. +-.+++.++.+.+..
T Consensus 116 ~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~a-krl~~-~G~----~aVmPlg~---pIGsG~Gi~~~~lI~~I~e~~ 186 (265)
T 1wv2_A 116 TLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIA-RQLAE-IGC----IAVMPLAG---LIGSGLGICNPYNLRIILEEA 186 (265)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHH-HHHHH-SCC----SEEEECSS---STTCCCCCSCHHHHHHHHHHC
T ss_pred ccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHH-HHHHH-hCC----CEEEeCCc---cCCCCCCcCCHHHHHHHHhcC
Confidence 4567777765555 456999998777774533 55555 354 33443 22 1222 223588888888865
Q ss_pred CCCCCCCceEEEe---cCHhHHHHHHHcCCeEEEecCCC
Q psy6288 99 DEKPQPSKCLVFE---DAPNGVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 99 ~~~~~~~~~i~IG---D~~~Di~~a~~~G~~~i~v~~~~ 134 (166)
+ ++ ++++ .++.|+..|.+.|+..|+|.+..
T Consensus 187 ~--vP----VI~eGGI~TPsDAa~AmeLGAdgVlVgSAI 219 (265)
T 1wv2_A 187 K--VP----VLVDAGVGTASDAAIAMELGCEAVLMNTAI 219 (265)
T ss_dssp S--SC----BEEESCCCSHHHHHHHHHHTCSEEEESHHH
T ss_pred C--CC----EEEeCCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 5 43 4455 36799999999999999998764
No 197
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=75.95 E-value=3 Score=29.78 Aligned_cols=43 Identities=26% Similarity=0.502 Sum_probs=35.0
Q ss_pred HHhhhhhhhcC---CccchhHHHHHHHHHHCCCCEEEEeCCchhhH
Q psy6288 13 VIFDMDGLLLG---YNLAIGALRLINHLHKHNIPFAIATSSAKESF 55 (166)
Q Consensus 13 ~~~~~~~~~~~---~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~ 55 (166)
+..|+++.+.. ..+.+...++|++|+++|++++++|+.+...+
T Consensus 15 i~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~ 60 (268)
T 3r4c_A 15 LLLDVDGTLLSFETHKVSQSSIDALKKVHDSGIKIVIATGRAASDL 60 (268)
T ss_dssp EEECSBTTTBCTTTCSCCHHHHHHHHHHHHTTCEEEEECSSCTTCC
T ss_pred EEEeCCCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHh
Confidence 45677886654 35788999999999999999999999986654
No 198
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=75.73 E-value=6 Score=30.41 Aligned_cols=95 Identities=12% Similarity=0.052 Sum_probs=53.0
Q ss_pred HHHHHHHHHCCCC-EEEEeCCchh-hHHHHHhhhcCcccccceEEecCCCCCccCCCCChHH---HHHHHHHcCCCCCCC
Q psy6288 31 LRLINHLHKHNIP-FAIATSSAKE-SFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDV---FLVAAKRFDEKPQPS 105 (166)
Q Consensus 31 ~~~l~~l~~~g~~-i~ivS~~~~~-~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~---~~~~~~~~~~~~~~~ 105 (166)
..+++.|++. +. ..|+|+.... .+...+.+-+++. ..|..+... .....+--..+ +..+++++. |+
T Consensus 26 ~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~~~~i~-~~~~~l~~~---~~~~~~~~~~~~~~l~~~l~~~k----PD 96 (385)
T 4hwg_A 26 CCVISEFDKH-TKHILVHTGQNYAYELNQVFFDDMGIR-KPDYFLEVA---ADNTAKSIGLVIEKVDEVLEKEK----PD 96 (385)
T ss_dssp HHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC-CCCC-CCSEECCCC---CCCSHHHHHHHHHHHHHHHHHHC----CS
T ss_pred HHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHhhCCCC-CCceecCCC---CCCHHHHHHHHHHHHHHHHHhcC----Cc
Confidence 3467777765 65 5566777654 2333333445553 223333333 11221111122 334445544 99
Q ss_pred ceEEEecCH--hHHHHHHHcCCeEEEecCCC
Q psy6288 106 KCLVFEDAP--NGVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 106 ~~i~IGD~~--~Di~~a~~~G~~~i~v~~~~ 134 (166)
=++..||.. .-..+|+..|++.+.+..|.
T Consensus 97 ~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl 127 (385)
T 4hwg_A 97 AVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN 127 (385)
T ss_dssp EEEEESCSGGGGGHHHHHHTTCCEEEESCCC
T ss_pred EEEEECCchHHHHHHHHHHhCCCEEEEeCCC
Confidence 999999853 22789999999998887664
No 199
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=75.16 E-value=2.6 Score=30.90 Aligned_cols=45 Identities=24% Similarity=0.420 Sum_probs=34.2
Q ss_pred HHhhhhhhhcC--Cccchh-HHHHHHHHHHCCCCEEEEeCCchhhHHH
Q psy6288 13 VIFDMDGLLLG--YNLAIG-ALRLINHLHKHNIPFAIATSSAKESFEL 57 (166)
Q Consensus 13 ~~~~~~~~~~~--~~~~~g-~~~~l~~l~~~g~~i~ivS~~~~~~~~~ 57 (166)
+..|+++.+.. ..+.+. +.++|++|+++|+.++++|+.+...+..
T Consensus 40 i~fDlDGTLld~~~~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~ 87 (304)
T 3l7y_A 40 IATDMDGTFLNSKGSYDHNRFQRILKQLQERDIRFVVASSNPYRQLRE 87 (304)
T ss_dssp EEECCCCCCSCTTSCCCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHT
T ss_pred EEEeCCCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH
Confidence 45667775553 234566 7899999999999999999999776633
No 200
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=73.63 E-value=5.8 Score=30.48 Aligned_cols=96 Identities=11% Similarity=0.029 Sum_probs=52.9
Q ss_pred HHHHHHHHHC-CCCE-EEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHH---HHHHHHHcCCCCCCC
Q psy6288 31 LRLINHLHKH-NIPF-AIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDV---FLVAAKRFDEKPQPS 105 (166)
Q Consensus 31 ~~~l~~l~~~-g~~i-~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~---~~~~~~~~~~~~~~~ 105 (166)
..+++.|++. ++.+ .++|+......... .+.+|+.. |.-+.-... .....+.-... +.++++++. |+
T Consensus 42 a~li~~l~~~~~~~~~~~~tG~h~~~~~~~-~~~~~i~~--~~~l~~~~~-~~~~~~~~~~~~~~l~~~l~~~k----PD 113 (396)
T 3dzc_A 42 APLVQQLCQDNRFVAKVCVTGQHREMLDQV-LELFSITP--DFDLNIMEP-GQTLNGVTSKILLGMQQVLSSEQ----PD 113 (396)
T ss_dssp HHHHHHHHHCTTEEEEEEECCSSSHHHHHH-HHHTTCCC--SEECCCCCT-TCCHHHHHHHHHHHHHHHHHHHC----CS
T ss_pred HHHHHHHHhCCCCcEEEEEecccHHHHHHH-HHhcCCCC--ceeeecCCC-CCCHHHHHHHHHHHHHHHHHhcC----CC
Confidence 4578888876 6777 47777765433333 34467632 222221100 11111111122 333444444 88
Q ss_pred ceEEEecCHh---HHHHHHHcCCeEEEecCCC
Q psy6288 106 KCLVFEDAPN---GVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 106 ~~i~IGD~~~---Di~~a~~~G~~~i~v~~~~ 134 (166)
=++.+||... -..+|+..|++.+.+..|.
T Consensus 114 vVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~ 145 (396)
T 3dzc_A 114 VVLVHGDTATTFAASLAAYYQQIPVGHVEAGL 145 (396)
T ss_dssp EEEEETTSHHHHHHHHHHHTTTCCEEEETCCC
T ss_pred EEEEECCchhHHHHHHHHHHhCCCEEEEECCc
Confidence 8999998764 3567888999998886553
No 201
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=72.86 E-value=3.8 Score=27.65 Aligned_cols=30 Identities=13% Similarity=0.063 Sum_probs=25.9
Q ss_pred CCccchhH-HHHHHHHHHCCCCEEEEeCCch
Q psy6288 23 GYNLAIGA-LRLINHLHKHNIPFAIATSSAK 52 (166)
Q Consensus 23 ~~~~~~g~-~~~l~~l~~~g~~i~ivS~~~~ 52 (166)
+..++++. .++++.+++.|+++.+.||+..
T Consensus 13 EPll~~~~~~~l~~~~~~~g~~~~l~TNG~l 43 (182)
T 3can_A 13 EPLLHPEFLIDILKRCGQQGIHRAVDTTLLA 43 (182)
T ss_dssp TGGGSHHHHHHHHHHHHHTTCCEEEECTTCC
T ss_pred cccCCHHHHHHHHHHHHHCCCcEEEECCCCC
Confidence 45668887 5999999999999999999974
No 202
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=72.38 E-value=4.5 Score=28.63 Aligned_cols=40 Identities=23% Similarity=0.365 Sum_probs=31.0
Q ss_pred hhhhhhhcC--CccchhHHHHHHHHHHCCCCEEEEeCCchhhH
Q psy6288 15 FDMDGLLLG--YNLAIGALRLINHLHKHNIPFAIATSSAKESF 55 (166)
Q Consensus 15 ~~~~~~~~~--~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~ 55 (166)
.|+++.+.. ..+-+...++|++|+++ ++++++|+.+...+
T Consensus 11 ~DlDGTLl~~~~~i~~~~~~al~~l~~~-i~v~iaTGR~~~~~ 52 (246)
T 2amy_A 11 FDVDGTLTAPRQKITKEMDDFLQKLRQK-IKIGVVGGSDFEKV 52 (246)
T ss_dssp EESBTTTBCTTSCCCHHHHHHHHHHTTT-SEEEEECSSCHHHH
T ss_pred EECCCCcCCCCcccCHHHHHHHHHHHhC-CeEEEEcCCCHHHH
Confidence 456665542 34668899999999998 99999999986544
No 203
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=72.23 E-value=12 Score=27.47 Aligned_cols=31 Identities=16% Similarity=0.021 Sum_probs=27.3
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCch
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAK 52 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~ 52 (166)
.+..++|.+.++++.+++.|+.+.+.||+..
T Consensus 137 GEPll~~~l~~li~~~~~~g~~~~l~TNG~~ 167 (311)
T 2z2u_A 137 GEPTLYPYLDELIKIFHKNGFTTFVVSNGIL 167 (311)
T ss_dssp SCGGGSTTHHHHHHHHHHTTCEEEEEECSCC
T ss_pred cCccchhhHHHHHHHHHHCCCcEEEECCCCC
Confidence 3456689999999999999999999999986
No 204
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=69.84 E-value=5.4 Score=28.58 Aligned_cols=44 Identities=16% Similarity=0.294 Sum_probs=33.1
Q ss_pred HhhhhhhhcC--CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHH
Q psy6288 14 IFDMDGLLLG--YNLAIGALRLINHLHKHNIPFAIATSSAKESFELK 58 (166)
Q Consensus 14 ~~~~~~~~~~--~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~ 58 (166)
..|+++.+.. ..+-+...++|++|++. ++++++|+.+...+...
T Consensus 17 ~~DlDGTLl~~~~~is~~~~~al~~l~~~-i~v~iaTGR~~~~~~~~ 62 (262)
T 2fue_A 17 LFDVDGTLTPARQKIDPEVAAFLQKLRSR-VQIGVVGGSDYCKIAEQ 62 (262)
T ss_dssp EEESBTTTBSTTSCCCHHHHHHHHHHTTT-SEEEEECSSCHHHHHHH
T ss_pred EEeCccCCCCCCCcCCHHHHHHHHHHHhC-CEEEEEcCCCHHHHHHH
Confidence 3566775542 34678999999999988 99999999987655433
No 205
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=69.66 E-value=24 Score=25.59 Aligned_cols=83 Identities=19% Similarity=0.233 Sum_probs=53.3
Q ss_pred CCCCEEEEeCCch---hhHHHHHhhhc----CcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCCCceEEEec
Q psy6288 40 HNIPFAIATSSAK---ESFELKTSRHK----DTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFED 112 (166)
Q Consensus 40 ~g~~i~ivS~~~~---~~~~~~l~~~~----gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD 112 (166)
.++.+.++|++.. +.+........ .+..-| .|+.+. +..-|.|...+.+++.-+ + .|++|||
T Consensus 31 edI~vrv~gsGaKm~pe~~~~~~~~~~~~~~~~~pDf-vI~isP-----N~a~PGP~~ARE~l~~~~--i---P~IvI~D 99 (283)
T 1qv9_A 31 EDVEFRVVGTSVKMDPECVEAAVEMALDIAEDFEPDF-IVYGGP-----NPAAPGPSKAREMLADSE--Y---PAVIIGD 99 (283)
T ss_dssp SSEEEEEEECTTCCSHHHHHHHHHHHHHHHHHHCCSE-EEEECS-----CTTSHHHHHHHHHHHTSS--S---CEEEEEE
T ss_pred CCceEEEeccCCCCCHHHHHHHHHHhhhhhhhcCCCE-EEEECC-----CCCCCCchHHHHHHHhCC--C---CEEEEcC
Confidence 4788889988852 22222211110 222322 345544 345677888888887776 3 4899999
Q ss_pred CH--hHHHHHHHcCCeEEEecCC
Q psy6288 113 AP--NGVLGAKAAGMSCVMVPDP 133 (166)
Q Consensus 113 ~~--~Di~~a~~~G~~~i~v~~~ 133 (166)
.+ ..-..-.+.|+..|.+...
T Consensus 100 ~p~~K~kd~l~~~g~GYIivk~D 122 (283)
T 1qv9_A 100 APGLKVKDEMEEQGLGYILVKPD 122 (283)
T ss_dssp GGGGGGHHHHHHTTCEEEEETTS
T ss_pred CcchhhHHHHHhcCCcEEEEecC
Confidence 88 6778888899999998765
No 206
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=69.66 E-value=11 Score=27.22 Aligned_cols=60 Identities=18% Similarity=0.109 Sum_probs=40.3
Q ss_pred HHhhhhhhhcCCccchhHHHHHH--------HHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEE
Q psy6288 13 VIFDMDGLLLGYNLAIGALRLIN--------HLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVV 73 (166)
Q Consensus 13 ~~~~~~~~~~~~~~~~g~~~~l~--------~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~ 73 (166)
++.|+++.+.+..+.+.....+. .+++.|+.++++|+.+...+...+.. +|+....+.++
T Consensus 25 iifDlDGTLlds~i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~-~g~~~~~~~~i 92 (289)
T 3gyg_A 25 VFCDFDETYFPHTIDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGR-GKFRYFPHFIA 92 (289)
T ss_dssp EEEETBTTTBCSSCCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHH-TTCCBCCSEEE
T ss_pred EEEECCCCCcCCCCCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHh-hccCCCCCeEe
Confidence 45677887665445566666666 44678999999999998877555544 57754444444
No 207
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=67.63 E-value=6.1 Score=30.49 Aligned_cols=96 Identities=14% Similarity=-0.007 Sum_probs=49.7
Q ss_pred HHHHHHHHHC--CCCEE-EEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHH---HHHHHHHcCCCCCC
Q psy6288 31 LRLINHLHKH--NIPFA-IATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDV---FLVAAKRFDEKPQP 104 (166)
Q Consensus 31 ~~~l~~l~~~--g~~i~-ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~---~~~~~~~~~~~~~~ 104 (166)
..+++.|++. ++.+. ++|+.........+ +.+|+.. |.-+.-.+. .....+..... +.++++++ .|
T Consensus 44 a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~-~~~~i~~--~~~l~v~~~-~~~~~~~~~~~~~~l~~~l~~~----kP 115 (403)
T 3ot5_A 44 APLVLALEKEPETFESTVVITAQHREMLDQVL-EIFDIKP--DIDLDIMKK-GQTLAEITSRVMNGINEVIAAE----NP 115 (403)
T ss_dssp HHHHHHHHTCTTTEEEEEEECC-----CHHHH-HHTTCCC--SEECCCCC--CCCHHHHHHHHHHHHHHHHHHH----CC
T ss_pred HHHHHHHHhCCCCCcEEEEEecCcHHHHHHHH-HhcCCCC--CcccccCCC-CCCHHHHHHHHHHHHHHHHHHc----CC
Confidence 4578888876 57754 66765533333333 4467632 221111000 11111101112 33344444 48
Q ss_pred CceEEEecCHh---HHHHHHHcCCeEEEecCCC
Q psy6288 105 SKCLVFEDAPN---GVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 105 ~~~i~IGD~~~---Di~~a~~~G~~~i~v~~~~ 134 (166)
+=++.+||... -..+|+..|++.+.+..|.
T Consensus 116 D~Vi~~gd~~~~l~~~laA~~~~IPv~h~~agl 148 (403)
T 3ot5_A 116 DIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGL 148 (403)
T ss_dssp SEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC
T ss_pred CEEEEECCchhHHHHHHHHHHhCCCEEEEECCc
Confidence 99999999653 3567888999998887654
No 208
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=65.87 E-value=13 Score=25.37 Aligned_cols=51 Identities=18% Similarity=0.369 Sum_probs=33.6
Q ss_pred Hhhhhhhhc-CCccchhHHHHHHHHHHCCCCEEEEeCC---chhhHHHHHhhhcCc
Q psy6288 14 IFDMDGLLL-GYNLAIGALRLINHLHKHNIPFAIATSS---AKESFELKTSRHKDT 65 (166)
Q Consensus 14 ~~~~~~~~~-~~~~~~g~~~~l~~l~~~g~~i~ivS~~---~~~~~~~~l~~~~gl 65 (166)
+.|+++.+. .....+...++++.|++.|+++.++|+. +...+...+.+ +|+
T Consensus 7 ~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~-~g~ 61 (250)
T 2c4n_A 7 ICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFAT-AGV 61 (250)
T ss_dssp EEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHH-TTC
T ss_pred EEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHH-cCC
Confidence 456677554 3445666688999999999999999944 44444344433 354
No 209
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=62.82 E-value=24 Score=23.89 Aligned_cols=39 Identities=10% Similarity=0.117 Sum_probs=24.7
Q ss_pred chhHHHHHHHHHHCCCC-EEEEeCCchhhHHHHHhhhcCcc
Q psy6288 27 AIGALRLINHLHKHNIP-FAIATSSAKESFELKTSRHKDTL 66 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~-i~ivS~~~~~~~~~~l~~~~gl~ 66 (166)
.|.+.++.+++++.|+. ++.+|.++........ +..++.
T Consensus 77 ~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~-~~~~~~ 116 (184)
T 3uma_A 77 LPGYLENRDAILARGVDDIAVVAVNDLHVMGAWA-THSGGM 116 (184)
T ss_dssp HHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHH-HHHTCT
T ss_pred HHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHH-HHhCCC
Confidence 35566666777777888 8888877755543333 334664
No 210
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=62.38 E-value=26 Score=22.03 Aligned_cols=39 Identities=8% Similarity=0.131 Sum_probs=23.5
Q ss_pred hhHHHHHHHHHH----CCCCEEEEeCCchhhHHHHHhhhcCccc
Q psy6288 28 IGALRLINHLHK----HNIPFAIATSSAKESFELKTSRHKDTLK 67 (166)
Q Consensus 28 ~g~~~~l~~l~~----~g~~i~ivS~~~~~~~~~~l~~~~gl~~ 67 (166)
.+-.++++.+++ .+.+++++|+...........+ .|...
T Consensus 72 ~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~-~g~~~ 114 (152)
T 3heb_A 72 MTGIDILKLVKENPHTRRSPVVILTTTDDQREIQRCYD-LGANV 114 (152)
T ss_dssp SBHHHHHHHHHHSTTTTTSCEEEEESCCCHHHHHHHHH-TTCSE
T ss_pred CcHHHHHHHHHhcccccCCCEEEEecCCCHHHHHHHHH-CCCcE
Confidence 345678888877 3567888888765544334434 25433
No 211
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=58.51 E-value=35 Score=22.17 Aligned_cols=38 Identities=5% Similarity=0.038 Sum_probs=25.2
Q ss_pred chhHHHHHHHHHHCCCC-EEEEeCCchhhHHHHHhhhcCc
Q psy6288 27 AIGALRLINHLHKHNIP-FAIATSSAKESFELKTSRHKDT 65 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~-i~ivS~~~~~~~~~~l~~~~gl 65 (166)
.|.+.++.+++++.|+. ++.+|..+....... .+..++
T Consensus 56 ~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~-~~~~~~ 94 (162)
T 1tp9_A 56 VPGFIEKAGELKSKGVTEILCISVNDPFVMKAW-AKSYPE 94 (162)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHH-HHTCTT
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH-HHhcCC
Confidence 45566677777778899 888888775544333 343465
No 212
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=57.81 E-value=15 Score=24.57 Aligned_cols=31 Identities=10% Similarity=0.066 Sum_probs=25.3
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchhhH
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKESF 55 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~ 55 (166)
.--+.+.++++.+++.|.+++.+|+.....+
T Consensus 98 G~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l 128 (187)
T 3sho_A 98 RYLRDTVAALAGAAERGVPTMALTDSSVSPP 128 (187)
T ss_dssp SCCHHHHHHHHHHHHTTCCEEEEESCTTSHH
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEeCCCCCcc
Confidence 3457788899999999999999999875533
No 213
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=57.71 E-value=14 Score=24.66 Aligned_cols=30 Identities=20% Similarity=0.243 Sum_probs=25.1
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchhh
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKES 54 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~ 54 (166)
.-.+.+.++++.+++.|.+++.+|+.....
T Consensus 107 G~t~~~~~~~~~ak~~g~~vi~IT~~~~s~ 136 (183)
T 2xhz_A 107 GESSEITALIPVLKRLHVPLICITGRPESS 136 (183)
T ss_dssp SCCHHHHHHHHHHHTTTCCEEEEESCTTSH
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCCh
Confidence 446788889999999999999999987553
No 214
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=57.21 E-value=14 Score=25.12 Aligned_cols=32 Identities=9% Similarity=0.117 Sum_probs=26.2
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhH
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESF 55 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~ 55 (166)
..--+.+.++++.++++|.+++.+|+.....+
T Consensus 123 SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~L 154 (199)
T 1x92_A 123 SGNSANVIQAIQAAHDREMLVVALTGRDGGGM 154 (199)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEEEEECTTCHHH
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEECCCCCcH
Confidence 34467889999999999999999999875533
No 215
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=55.84 E-value=11 Score=26.60 Aligned_cols=46 Identities=11% Similarity=-0.042 Sum_probs=30.4
Q ss_pred hhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecC
Q psy6288 28 IGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGS 76 (166)
Q Consensus 28 ~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~ 76 (166)
+...++|++++ .|++++++|+.+...+...+.+ +++.. ++.++++.
T Consensus 22 ~~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~-l~l~~-~~~~I~~N 67 (244)
T 1s2o_A 22 EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQ-VGLME-PDYWLTAV 67 (244)
T ss_dssp HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHH-HTCCC-CSEEEETT
T ss_pred HHHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHH-cCCCC-CCEEEECC
Confidence 45566677755 5899999999998877554433 46542 34556654
No 216
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=55.78 E-value=47 Score=24.51 Aligned_cols=52 Identities=12% Similarity=0.093 Sum_probs=39.6
Q ss_pred HHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcC
Q psy6288 31 LRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFD 99 (166)
Q Consensus 31 ~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~ 99 (166)
.++++.+++.|+++.+-|-+....+. .+.+ +|. |.|++-. |..+..++++.+
T Consensus 258 ~~~v~~~~~~Gl~V~~WTVn~~~~~~-~l~~-~GV----DgIiTD~-----------P~~~~~~l~~~g 309 (313)
T 3l12_A 258 PELVAEAHDLGLIVLTWTVNEPEDIR-RMAT-TGV----DGIVTDY-----------PGRTQRILIDMG 309 (313)
T ss_dssp HHHHHHHHHTTCEEEEBCCCSHHHHH-HHHH-HTC----SEEEESC-----------HHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHH-HHHH-cCC----CEEEeCC-----------HHHHHHHHHhcC
Confidence 57899999999999999988866653 4444 365 6666644 788888888877
No 217
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=55.77 E-value=12 Score=26.07 Aligned_cols=30 Identities=13% Similarity=0.007 Sum_probs=24.8
Q ss_pred CCccchh-HHHHHHHHHHCCCCEEEEeCCch
Q psy6288 23 GYNLAIG-ALRLINHLHKHNIPFAIATSSAK 52 (166)
Q Consensus 23 ~~~~~~g-~~~~l~~l~~~g~~i~ivS~~~~ 52 (166)
+..+.++ +.++++.+++.|+++.+.||+..
T Consensus 79 EP~l~~~~l~~l~~~~~~~~~~i~i~Tng~~ 109 (245)
T 3c8f_A 79 EAILQAEFVRDWFRACKKEGIHTCLDTNGFV 109 (245)
T ss_dssp CGGGGHHHHHHHHHHHHTTTCCEEEEECCCC
T ss_pred CcCCCHHHHHHHHHHHHHcCCcEEEEeCCCc
Confidence 4555777 58999999999999999999853
No 218
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=55.00 E-value=17 Score=27.17 Aligned_cols=39 Identities=15% Similarity=-0.000 Sum_probs=30.1
Q ss_pred CCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhh
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSR 61 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~ 61 (166)
+..+++.+.++++.+++.|+++.+.||+..+.....+.+
T Consensus 152 EPll~~~l~~ll~~~~~~g~~i~l~TNG~~~e~l~~L~~ 190 (342)
T 2yx0_A 152 EPMLYPYMGDLVEEFHKRGFTTFIVTNGTIPERLEEMIK 190 (342)
T ss_dssp CGGGSTTHHHHHHHHHHTTCEEEEEECSCCHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHCCCcEEEEcCCCcHHHHHHHHh
Confidence 455678999999999999999999999986433334433
No 219
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=54.49 E-value=13 Score=24.99 Aligned_cols=31 Identities=6% Similarity=-0.030 Sum_probs=25.3
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhh
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKES 54 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~ 54 (166)
..--+.+.++++.+++.|.+++.+|+.....
T Consensus 120 sG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~ 150 (188)
T 1tk9_A 120 SGKSPNVLEALKKAKELNMLCLGLSGKGGGM 150 (188)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEEEEEEGGGTT
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeCCCCcc
Confidence 3446888999999999999999999976543
No 220
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=53.50 E-value=15 Score=24.79 Aligned_cols=30 Identities=7% Similarity=-0.032 Sum_probs=24.6
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchhh
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKES 54 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~ 54 (166)
.--+.+.++++.+++.|.+++.+|+.....
T Consensus 127 G~t~~~~~~~~~ak~~g~~vI~IT~~~~s~ 156 (198)
T 2xbl_A 127 GKSPNILAAFREAKAKGMTCVGFTGNRGGE 156 (198)
T ss_dssp SCCHHHHHHHHHHHHTTCEEEEEECSCCCT
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEECCCCCc
Confidence 445788899999999999999999876543
No 221
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=52.22 E-value=19 Score=24.11 Aligned_cols=27 Identities=7% Similarity=-0.061 Sum_probs=23.6
Q ss_pred chhHHHHHHHHHHCCCCEEEEeCCchh
Q psy6288 27 AIGALRLINHLHKHNIPFAIATSSAKE 53 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~i~ivS~~~~~ 53 (166)
.+.+.++++.+++.|.+++.+|+....
T Consensus 92 t~~~~~~~~~ak~~g~~vi~IT~~~~s 118 (186)
T 1m3s_A 92 TKSLIHTAAKAKSLHGIVAALTINPES 118 (186)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESCTTS
T ss_pred cHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 477888999999999999999998655
No 222
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=52.17 E-value=57 Score=23.18 Aligned_cols=51 Identities=8% Similarity=0.135 Sum_probs=36.5
Q ss_pred HHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHc
Q psy6288 31 LRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRF 98 (166)
Q Consensus 31 ~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~ 98 (166)
.++++.+++.|+++.+-|-+....+. .+.+ +|. |.|++-. |..+..+++++
T Consensus 194 ~~~v~~~~~~G~~V~~WTvn~~~~~~-~l~~-~GV----DgIiTD~-----------P~~~~~~~~~~ 244 (250)
T 3ks6_A 194 AGLMAQVQAAGLDFGCWAAHTPSQIT-KALD-LGV----KVFTTDR-----------PTLAIALRTEH 244 (250)
T ss_dssp HHHHHHHHHTTCEEEEECCCSHHHHH-HHHH-HTC----SEEEESC-----------HHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEeCCCHHHHH-HHHH-cCC----CEEEcCC-----------HHHHHHHHHHh
Confidence 57899999999999999988877663 4444 365 6666644 66666666654
No 223
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=51.37 E-value=39 Score=25.09 Aligned_cols=52 Identities=8% Similarity=-0.082 Sum_probs=33.7
Q ss_pred CChHHHHHHHHHHHhh-hhh---hhcCCccchhHHHHHHHHHHCCC--CEEEEeCCch
Q psy6288 1 MNISQVLNYVTHVIFD-MDG---LLLGYNLAIGALRLINHLHKHNI--PFAIATSSAK 52 (166)
Q Consensus 1 ~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~g~~~~l~~l~~~g~--~i~ivS~~~~ 52 (166)
|+.+++...++.+... ... .-.+..+++++.++++.+++.+. .+.+.||+..
T Consensus 50 ls~e~i~~~i~~~~~~g~~~i~~tGGEPll~~~l~~li~~~~~~~~~~~i~i~TNG~l 107 (340)
T 1tv8_A 50 LTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLL 107 (340)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEESSCGGGSTTHHHHHHHHTTCTTCCEEEEEECSTT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCCccchhhHHHHHHHHHhCCCCCeEEEEeCccc
Confidence 3455666555554321 111 11245567899999999998866 7899999874
No 224
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=51.00 E-value=48 Score=23.36 Aligned_cols=50 Identities=6% Similarity=-0.004 Sum_probs=35.6
Q ss_pred HHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHc
Q psy6288 32 RLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRF 98 (166)
Q Consensus 32 ~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~ 98 (166)
++++.+++.|+++.+-|-+....+. .+.+ .|. |.|++-. |..+..++++-
T Consensus 187 ~~v~~~~~~G~~v~~WTVn~~~~~~-~l~~-~GV----dgIiTD~-----------P~~~~~~l~~r 236 (238)
T 3no3_A 187 DWVKDCKVLGMTSNVWTVDDPKLME-EMID-MGV----DFITTDL-----------PEETQKILHSR 236 (238)
T ss_dssp THHHHHHHTTCEEEEECCCSHHHHH-HHHH-HTC----SEEEESC-----------HHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEECCCCHHHHH-HHHH-cCC----CEEECCC-----------HHHHHHHHHhc
Confidence 5889999999999999988877664 4444 365 6666644 66666666553
No 225
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=50.58 E-value=51 Score=21.68 Aligned_cols=39 Identities=8% Similarity=0.030 Sum_probs=24.5
Q ss_pred chhHHHHHHHHHHCCC-CEEEEeCCchhhHHHHHhhhcCcc
Q psy6288 27 AIGALRLINHLHKHNI-PFAIATSSAKESFELKTSRHKDTL 66 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~-~i~ivS~~~~~~~~~~l~~~~gl~ 66 (166)
.|.+.++.+++++.|+ .++.+|.++........ +..++.
T Consensus 52 ~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~-~~~~~~ 91 (167)
T 2wfc_A 52 LPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWG-KAHGAD 91 (167)
T ss_dssp HHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHH-HHTTCT
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHH-HhcCCC
Confidence 4555566667777888 88888877655443333 334654
No 226
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=49.77 E-value=31 Score=22.06 Aligned_cols=38 Identities=13% Similarity=0.310 Sum_probs=23.5
Q ss_pred HHHHHHHHH----CCCCEEEEeCCchhhHHHHHhhhcCccccc
Q psy6288 31 LRLINHLHK----HNIPFAIATSSAKESFELKTSRHKDTLKLF 69 (166)
Q Consensus 31 ~~~l~~l~~----~g~~i~ivS~~~~~~~~~~l~~~~gl~~~f 69 (166)
.++++++++ ...+++++|+...........+. |..+|+
T Consensus 73 ~el~~~ir~~~~~~~ipvI~lTa~~~~~~~~~~~~~-Ga~~yl 114 (134)
T 3to5_A 73 IDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQA-GVNGYI 114 (134)
T ss_dssp HHHHHHHHHSTTTTTCCEEEEESSCCHHHHHHHHHT-TCCEEE
T ss_pred HHHHHHHHhCCCCCCCeEEEEECCCCHHHHHHHHHC-CCCEEE
Confidence 467788875 25678888887655444444443 665543
No 227
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=49.55 E-value=29 Score=20.93 Aligned_cols=38 Identities=18% Similarity=0.264 Sum_probs=20.9
Q ss_pred HHHHHHHHHHC----CCCEEEEeCCchhhHHHHHhhhcCcccc
Q psy6288 30 ALRLINHLHKH----NIPFAIATSSAKESFELKTSRHKDTLKL 68 (166)
Q Consensus 30 ~~~~l~~l~~~----g~~i~ivS~~~~~~~~~~l~~~~gl~~~ 68 (166)
-.++++.+++. +.+++++|+...........+ .|..+|
T Consensus 61 g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~-~Ga~~~ 102 (122)
T 3gl9_A 61 GFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALS-LGARKV 102 (122)
T ss_dssp HHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHH-TTCSEE
T ss_pred HHHHHHHHHhcccccCCCEEEEecCCchHHHHHHHh-cChhhh
Confidence 45677777653 467777777654443333333 255443
No 228
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=49.30 E-value=68 Score=22.76 Aligned_cols=50 Identities=10% Similarity=0.040 Sum_probs=35.2
Q ss_pred HHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHH
Q psy6288 31 LRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKR 97 (166)
Q Consensus 31 ~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~ 97 (166)
.++++.+++.|+++.+-|-+....+. .+.+ +|. |.|++-. |..+..++++
T Consensus 200 ~~~v~~~~~~G~~v~~WTvn~~~~~~-~l~~-~GV----dgIiTD~-----------P~~~~~~l~~ 249 (252)
T 3qvq_A 200 VQQVSDIKAAGYKVLAFTINDESLAL-KLYN-QGL----DAVFSDY-----------PQKIQSAIDS 249 (252)
T ss_dssp HHHHHHHHHTTCEEEEECCCCHHHHH-HHHH-TTC----CEEEESS-----------HHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHH-HHHH-cCC----CEEEeCC-----------HHHHHHHHHH
Confidence 46889999999999999988877663 4444 365 5666644 6666666554
No 229
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=49.21 E-value=19 Score=24.27 Aligned_cols=30 Identities=3% Similarity=0.006 Sum_probs=25.1
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchh
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKE 53 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~ 53 (166)
..--+.+.++++.+++.|.+++.+|+....
T Consensus 119 SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s 148 (196)
T 2yva_A 119 RGNSRDIVKAVEAAVTRDMTIVALTGYDGG 148 (196)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEEEEECTTCH
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeCCCCc
Confidence 344678889999999999999999998755
No 230
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=48.97 E-value=16 Score=24.97 Aligned_cols=29 Identities=7% Similarity=0.055 Sum_probs=24.4
Q ss_pred cchhHHHHHHHHHHCCCCEEEEeCCchhh
Q psy6288 26 LAIGALRLINHLHKHNIPFAIATSSAKES 54 (166)
Q Consensus 26 ~~~g~~~~l~~l~~~g~~i~ivS~~~~~~ 54 (166)
--+.+.++++.+++.|.+++.+|+.....
T Consensus 101 ~t~~~i~~~~~ak~~g~~vI~IT~~~~s~ 129 (200)
T 1vim_A 101 ETTSVVNISKKAKDIGSKLVAVTGKRDSS 129 (200)
T ss_dssp CCHHHHHHHHHHHHHTCEEEEEESCTTSH
T ss_pred CcHHHHHHHHHHHHCCCeEEEEECCCCCh
Confidence 35778899999999999999999987553
No 231
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=48.68 E-value=82 Score=23.51 Aligned_cols=27 Identities=15% Similarity=0.268 Sum_probs=18.9
Q ss_pred EEEecCHhHHHHHHHcCCeEEEecCCC
Q psy6288 108 LVFEDAPNGVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 108 i~IGD~~~Di~~a~~~G~~~i~v~~~~ 134 (166)
++||...--+..|...|.+++.+-.+.
T Consensus 264 ~~i~~DsG~~HlAaa~g~P~v~lfg~t 290 (349)
T 3tov_A 264 LLITNDSGPMHVGISQGVPIVALYGPS 290 (349)
T ss_dssp EEEEESSHHHHHHHTTTCCEEEECSSC
T ss_pred EEEECCCCHHHHHHhcCCCEEEEECCC
Confidence 455543444777889999999986654
No 232
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=48.26 E-value=44 Score=20.35 Aligned_cols=24 Identities=4% Similarity=0.164 Sum_probs=12.9
Q ss_pred HHHHHHHHHHC--CCCEEEEeCCchh
Q psy6288 30 ALRLINHLHKH--NIPFAIATSSAKE 53 (166)
Q Consensus 30 ~~~~l~~l~~~--g~~i~ivS~~~~~ 53 (166)
-.++++.+++. +.+++++|+....
T Consensus 66 g~~~~~~l~~~~~~~~ii~~s~~~~~ 91 (137)
T 3hdg_A 66 GLEMLDRIKAGGAKPYVIVISAFSEM 91 (137)
T ss_dssp HHHHHHHHHHTTCCCEEEECCCCCCH
T ss_pred HHHHHHHHHhcCCCCcEEEEecCcCh
Confidence 44566666553 3455666655433
No 233
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=48.24 E-value=56 Score=21.50 Aligned_cols=38 Identities=3% Similarity=-0.038 Sum_probs=24.8
Q ss_pred chhHHHHHHHHHHCCCC-EEEEeCCchhhHHHHHhhhcCc
Q psy6288 27 AIGALRLINHLHKHNIP-FAIATSSAKESFELKTSRHKDT 65 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~-i~ivS~~~~~~~~~~l~~~~gl 65 (166)
.|.+.++.+++++.|+. ++.+|..+....... .+..++
T Consensus 64 ~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~-~~~~~~ 102 (171)
T 2pwj_A 64 VPPYKHNIDKFKAKGVDSVICVAINDPYTVNAW-AEKIQA 102 (171)
T ss_dssp HHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHH-HHHTTC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHH-HHHhCC
Confidence 35556666777778999 888888765544333 343465
No 234
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=47.47 E-value=31 Score=25.02 Aligned_cols=50 Identities=12% Similarity=-0.051 Sum_probs=37.5
Q ss_pred hhhhhhcCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcc
Q psy6288 16 DMDGLLLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTL 66 (166)
Q Consensus 16 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~ 66 (166)
++--+..-....||=..+=+.|++.|++.+|+|..+....+..+.+. |+.
T Consensus 66 DfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p~~K~kd~l~~~-g~G 115 (283)
T 1qv9_A 66 DFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAPGLKVKDEMEEQ-GLG 115 (283)
T ss_dssp SEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGGGGGGHHHHHHT-TCE
T ss_pred CEEEEECCCCCCCCchHHHHHHHhCCCCEEEEcCCcchhhHHHHHhc-CCc
Confidence 33334444566899999999999999999999999877776666553 653
No 235
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=47.21 E-value=34 Score=20.81 Aligned_cols=39 Identities=13% Similarity=0.269 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHC----CCCEEEEeCCchhhHHHHHhhhcCcccc
Q psy6288 29 GALRLINHLHKH----NIPFAIATSSAKESFELKTSRHKDTLKL 68 (166)
Q Consensus 29 g~~~~l~~l~~~----g~~i~ivS~~~~~~~~~~l~~~~gl~~~ 68 (166)
+-.++++.+++. ..+++++|+...........+. |...|
T Consensus 65 ~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~-g~~~~ 107 (129)
T 3h1g_A 65 NGLDLVKKVRSDSRFKEIPIIMITAEGGKAEVITALKA-GVNNY 107 (129)
T ss_dssp CHHHHHHHHHTSTTCTTCCEEEEESCCSHHHHHHHHHH-TCCEE
T ss_pred CHHHHHHHHHhcCCCCCCeEEEEeCCCChHHHHHHHHc-CccEE
Confidence 345777777752 4678888877655433333342 55443
No 236
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=45.45 E-value=26 Score=20.71 Aligned_cols=33 Identities=9% Similarity=0.189 Sum_probs=25.9
Q ss_pred hcCCccchhHHHHHHHHHHCCCCEEEEeCCchh
Q psy6288 21 LLGYNLAIGALRLINHLHKHNIPFAIATSSAKE 53 (166)
Q Consensus 21 ~~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~ 53 (166)
+....--.++++.++.++.+|.+++++-|+...
T Consensus 31 irtatssqdirdiiksmkdngkplvvfvngasq 63 (112)
T 2lnd_A 31 IRTATSSQDIRDIIKSMKDNGKPLVVFVNGASQ 63 (112)
T ss_dssp EEEECSHHHHHHHHHHHTTCCSCEEEEECSCCH
T ss_pred eeeccchhhHHHHHHHHHhcCCeEEEEecCccc
Confidence 334455678999999999999999998887533
No 237
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=45.18 E-value=65 Score=21.40 Aligned_cols=39 Identities=8% Similarity=-0.031 Sum_probs=25.7
Q ss_pred chhHHHHHHHHHHCCCCEE-EEeCCchhhHHHHHhhhcCcc
Q psy6288 27 AIGALRLINHLHKHNIPFA-IATSSAKESFELKTSRHKDTL 66 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~i~-ivS~~~~~~~~~~l~~~~gl~ 66 (166)
.|.+.+..+++++.|+.++ ++|.++....... .+..++.
T Consensus 64 ~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f-~~~~~~~ 103 (173)
T 3mng_A 64 LPGFVEQAEALKAKGVQVVACLSVNDAFVTGEW-GRAHKAE 103 (173)
T ss_dssp HHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHH-HHHTTCT
T ss_pred HHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHH-HHHhCCC
Confidence 3566666777788899987 4888776555434 3445664
No 238
>1jei_A Emerin; membrane protein; NMR {Synthetic} SCOP: a.140.1.1 PDB: 2odc_I 2odg_C
Probab=44.76 E-value=11 Score=20.41 Aligned_cols=32 Identities=25% Similarity=0.296 Sum_probs=27.6
Q ss_pred HHHHHHHHHCCCCEEEEeCCchhhHHHHHhhh
Q psy6288 31 LRLINHLHKHNIPFAIATSSAKESFELKTSRH 62 (166)
Q Consensus 31 ~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~ 62 (166)
.++.+.|.+.|++.+-+|+..+...+++|.+.
T Consensus 9 ~eLr~~L~~~G~~~GPIt~sTRklYeKKL~~l 40 (53)
T 1jei_A 9 TELTTLLRRYNIPHGPVVGSTRRLYEKKIFEY 40 (53)
T ss_dssp HHHHHHHSSSCCSCCCCCSGGGHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCCCcccHHHHHHHHHHH
Confidence 36788899999999999999999888888764
No 239
>2nn4_A Hypothetical protein YQGQ; novel fold, PFAM:DUF910, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: a.272.1.1
Probab=44.60 E-value=8.1 Score=22.37 Aligned_cols=25 Identities=16% Similarity=0.045 Sum_probs=20.3
Q ss_pred HHHHHHHcCCCCCCCceEEEecCHhHHHHHH
Q psy6288 91 FLVAAKRFDEKPQPSKCLVFEDAPNGVLGAK 121 (166)
Q Consensus 91 ~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~ 121 (166)
.++.++++| -.|++||..+|++...
T Consensus 8 VqQLLK~fG------~~IY~GdR~~DielM~ 32 (72)
T 2nn4_A 8 VQQLLKTFG------HIVYFGDRELEIEFML 32 (72)
T ss_dssp HHHHHHTTT------CCCCCSCHHHHHHHHH
T ss_pred HHHHHHHCC------EEEEeCChHHHHHHHH
Confidence 467888888 3689999999998764
No 240
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=43.85 E-value=47 Score=20.35 Aligned_cols=39 Identities=18% Similarity=0.291 Sum_probs=24.2
Q ss_pred hHHHHHHHHHH----CCCCEEEEeCCchhhHHHHHhhhcCcccc
Q psy6288 29 GALRLINHLHK----HNIPFAIATSSAKESFELKTSRHKDTLKL 68 (166)
Q Consensus 29 g~~~~l~~l~~----~g~~i~ivS~~~~~~~~~~l~~~~gl~~~ 68 (166)
+-.++++.+++ .+.+++++|+...........+ .|...|
T Consensus 65 ~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~-~g~~~~ 107 (140)
T 3lua_A 65 EGLEVLSAIRNNSRTANTPVIIATKSDNPGYRHAALK-FKVSDY 107 (140)
T ss_dssp HHHHHHHHHHHSGGGTTCCEEEEESCCCHHHHHHHHH-SCCSEE
T ss_pred cHHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHH-cCCCEE
Confidence 45677888876 4678888888765544344434 355433
No 241
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=43.75 E-value=82 Score=22.11 Aligned_cols=100 Identities=11% Similarity=0.072 Sum_probs=53.0
Q ss_pred cchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHH---HHHHHHHc---C
Q psy6288 26 LAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDV---FLVAAKRF---D 99 (166)
Q Consensus 26 ~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~---~~~~~~~~---~ 99 (166)
..+...+.++.+++.|.++++..+.... . ..+.. +....|++......+..+..+-.+.. ++++.+.. +
T Consensus 97 ~~~~~~~~~~~i~~~g~~~gv~~~p~t~-~-e~~~~---~~~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~ 171 (230)
T 1tqj_A 97 ASPHLHRTLCQIRELGKKAGAVLNPSTP-L-DFLEY---VLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERG 171 (230)
T ss_dssp TCTTHHHHHHHHHHTTCEEEEEECTTCC-G-GGGTT---TGGGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHT
T ss_pred cchhHHHHHHHHHHcCCcEEEEEeCCCc-H-HHHHH---HHhcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcC
Confidence 3467889999999999999998853222 1 11222 22234544333222222222322333 33333332 2
Q ss_pred CCCCCCceEEEec-CHhHHHHHHHcCCeEEEecCC
Q psy6288 100 EKPQPSKCLVFED-APNGVLGAKAAGMSCVMVPDP 133 (166)
Q Consensus 100 ~~~~~~~~i~IGD-~~~Di~~a~~~G~~~i~v~~~ 133 (166)
.+ -.+...|- +..++....++|...+.+...
T Consensus 172 --~~-~~I~v~GGI~~~~~~~~~~aGad~vvvGSa 203 (230)
T 1tqj_A 172 --LD-PWIEVDGGLKPNNTWQVLEAGANAIVAGSA 203 (230)
T ss_dssp --CC-CEEEEESSCCTTTTHHHHHHTCCEEEESHH
T ss_pred --CC-CcEEEECCcCHHHHHHHHHcCCCEEEECHH
Confidence 11 23444444 457788889999998888754
No 242
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=43.69 E-value=23 Score=23.49 Aligned_cols=26 Identities=8% Similarity=0.015 Sum_probs=22.9
Q ss_pred chhHHHHHHHHHHCCCCEEEEeCCch
Q psy6288 27 AIGALRLINHLHKHNIPFAIATSSAK 52 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~i~ivS~~~~ 52 (166)
.+.+.++++.+++.|.+++.+|+...
T Consensus 95 t~~~~~~~~~ak~~g~~vi~IT~~~~ 120 (180)
T 1jeo_A 95 TESVLTVAKKAKNINNNIIAIVCECG 120 (180)
T ss_dssp CHHHHHHHHHHHTTCSCEEEEESSCC
T ss_pred cHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 47788899999999999999999864
No 243
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=43.14 E-value=43 Score=20.65 Aligned_cols=38 Identities=11% Similarity=0.229 Sum_probs=21.4
Q ss_pred hHHHHHHHHHH----CCCCEEEEeCCchhhHHHHHhhhcCccc
Q psy6288 29 GALRLINHLHK----HNIPFAIATSSAKESFELKTSRHKDTLK 67 (166)
Q Consensus 29 g~~~~l~~l~~----~g~~i~ivS~~~~~~~~~~l~~~~gl~~ 67 (166)
+..++++.+++ .+.+++++|+...........+ .|...
T Consensus 65 ~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~-~ga~~ 106 (144)
T 3kht_A 65 NGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMA-AGASS 106 (144)
T ss_dssp CHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHH-TTCSE
T ss_pred CHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHH-cCCCE
Confidence 34567777776 3567777777654443333333 25443
No 244
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=42.77 E-value=44 Score=20.54 Aligned_cols=25 Identities=20% Similarity=0.412 Sum_probs=15.0
Q ss_pred HHHHHHHHHHC----CCCEEEEeCCchhh
Q psy6288 30 ALRLINHLHKH----NIPFAIATSSAKES 54 (166)
Q Consensus 30 ~~~~l~~l~~~----g~~i~ivS~~~~~~ 54 (166)
-.++++.+++. ..+++++|+.....
T Consensus 63 g~~~~~~lr~~~~~~~~pii~~t~~~~~~ 91 (136)
T 3t6k_A 63 GYTLCKRVRQHPLTKTLPILMLTAQGDIS 91 (136)
T ss_dssp HHHHHHHHHHSGGGTTCCEEEEECTTCHH
T ss_pred HHHHHHHHHcCCCcCCccEEEEecCCCHH
Confidence 45666777653 45677777665443
No 245
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=42.73 E-value=46 Score=25.36 Aligned_cols=47 Identities=15% Similarity=0.046 Sum_probs=35.1
Q ss_pred chhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcc-cccceEEecC
Q psy6288 27 AIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTL-KLFHHVVLGS 76 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~-~~fd~v~~~~ 76 (166)
...+.++|+.+++.|.++++...+... ..+.+.+|+. ++++.++..+
T Consensus 305 ~~~l~~~l~~~k~~gk~v~~yGa~~~g---~~l~~~~~~~~~~i~~~~D~~ 352 (416)
T 4e2x_A 305 RDELTALLHRLRAEGRSVVGYGATAKS---ATVTNFCGIGPDLVHSVYDTT 352 (416)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCCSHH---HHHHHHHTCCTTTSCCEEESC
T ss_pred HHHHHHHHHHHHHcCCeEEEEccccHH---HHHHHhcCCCcceeeEEEeCC
Confidence 456678899999999999999888755 3455656776 5677777665
No 246
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=42.17 E-value=44 Score=23.77 Aligned_cols=40 Identities=15% Similarity=0.216 Sum_probs=27.6
Q ss_pred HHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecC
Q psy6288 31 LRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGS 76 (166)
Q Consensus 31 ~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~ 76 (166)
.++++.+++.|+++.+-|-+....+. .+.+ .|. |.|++-.
T Consensus 201 ~~~v~~~~~~G~~v~~wTvn~~~~~~-~l~~-~Gv----dgIiTD~ 240 (252)
T 2pz0_A 201 PELVEGCKKNGVKLFPWTVDRKEDME-RMIK-AGV----DGIITDD 240 (252)
T ss_dssp HHHHHHHHHTTCEECCBCCCSHHHHH-HHHH-HTC----SEEEESC
T ss_pred HHHHHHHHHCCCEEEEECCCCHHHHH-HHHH-cCC----CEEEcCC
Confidence 57889999999999999977766553 3334 354 5555543
No 247
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis}
Probab=41.73 E-value=1e+02 Score=24.26 Aligned_cols=86 Identities=5% Similarity=-0.059 Sum_probs=47.6
Q ss_pred HHHHHHHHHCCCCEEEEeCCch-hhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCCCceEE
Q psy6288 31 LRLINHLHKHNIPFAIATSSAK-ESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLV 109 (166)
Q Consensus 31 ~~~l~~l~~~g~~i~ivS~~~~-~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~ 109 (166)
..+++.+++.+...++..+... ..+ ..+.+.+|+. +.. ......--++.....+++++| ++.-....
T Consensus 92 ~~I~~~a~~~~id~Vip~sE~~l~~~-a~~~e~~Gi~-------g~~--~~ai~~~~DK~~~k~~l~~~G--Ipvp~~~~ 159 (474)
T 3vmm_A 92 EQIVKVAEMFGADAITTNNELFIAPM-AKACERLGLR-------GAG--VQAAENARDKNKMRDAFNKAG--VKSIKNKR 159 (474)
T ss_dssp HHHHHHHHHTTCSEEEESCGGGHHHH-HHHHHHTTCC-------CSC--HHHHHHTTCHHHHHHHHHHTT--SCCCCEEE
T ss_pred HHHHHHHHHcCCCEEEECCcccHHHH-HHHHHHcCCC-------CCC--HHHHHHhhCHHHHHHHHHHcC--CCCCCeEE
Confidence 3455666788888665533221 223 2333445653 111 011112235777888999999 66666666
Q ss_pred EecCHhHHHHHHHcCCeEE
Q psy6288 110 FEDAPNGVLGAKAAGMSCV 128 (166)
Q Consensus 110 IGD~~~Di~~a~~~G~~~i 128 (166)
+.+...-...+.+.|++.+
T Consensus 160 v~s~ee~~~~~~~lg~PvV 178 (474)
T 3vmm_A 160 VTTLEDFRAALEEIGTPLI 178 (474)
T ss_dssp ECSHHHHHHHHHHSCSSEE
T ss_pred ECCHHHHHHHHHHcCCCEE
Confidence 6543333456778898755
No 248
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=39.79 E-value=18 Score=24.94 Aligned_cols=29 Identities=7% Similarity=0.085 Sum_probs=22.7
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchh
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKE 53 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~ 53 (166)
.--+.+.++++.+++.|.+++.+|+....
T Consensus 142 G~t~~~i~~~~~ak~~G~~vIaIT~~~~s 170 (212)
T 2i2w_A 142 GNSANVIKAIAAAREKGMKVITLTGKDGG 170 (212)
T ss_dssp SCCHHHHHHHHHHHHHTCEEEEEEETTCG
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEECCCCC
Confidence 33477888889998889999999887533
No 249
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=39.54 E-value=62 Score=19.72 Aligned_cols=39 Identities=18% Similarity=0.350 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHC--CCCEEEEeCCchhhHHHHHhhhcCcccc
Q psy6288 29 GALRLINHLHKH--NIPFAIATSSAKESFELKTSRHKDTLKL 68 (166)
Q Consensus 29 g~~~~l~~l~~~--g~~i~ivS~~~~~~~~~~l~~~~gl~~~ 68 (166)
+-.++++.+++. ..+++++|+...........+ .|...|
T Consensus 66 ~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~-~ga~~~ 106 (136)
T 3kto_A 66 SGIELLETLVKRGFHLPTIVMASSSDIPTAVRAMR-ASAADF 106 (136)
T ss_dssp HHHHHHHHHHHTTCCCCEEEEESSCCHHHHHHHHH-TTCSEE
T ss_pred cHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHH-cChHHh
Confidence 456788888875 578999998775544344444 355443
No 250
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=39.53 E-value=23 Score=24.39 Aligned_cols=30 Identities=10% Similarity=0.063 Sum_probs=24.7
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchh
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKE 53 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~ 53 (166)
..--+.+.++++.+++.|.+++.+|+....
T Consensus 124 SG~t~~~~~~~~~ak~~g~~vi~iT~~~~s 153 (201)
T 3trj_A 124 SGDSENILSAVEEAHDLEMKVIALTGGSGG 153 (201)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEEEEEETTCC
T ss_pred CCCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 344678889999999999999999987655
No 251
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=39.52 E-value=41 Score=20.36 Aligned_cols=38 Identities=11% Similarity=0.159 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHC----CCCEEEEeCCchhhHHHHHhhhcCccc
Q psy6288 29 GALRLINHLHKH----NIPFAIATSSAKESFELKTSRHKDTLK 67 (166)
Q Consensus 29 g~~~~l~~l~~~----g~~i~ivS~~~~~~~~~~l~~~~gl~~ 67 (166)
+-.++++.+++. +.+++++|+...........+ .|...
T Consensus 69 ~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~-~g~~~ 110 (140)
T 1k68_A 69 DGREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYD-LHVNC 110 (140)
T ss_dssp CHHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHH-TTCSE
T ss_pred cHHHHHHHHHcCcccccccEEEEecCCcHHHHHHHHH-hchhh
Confidence 345777777763 467788887764433333333 24433
No 252
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=39.34 E-value=47 Score=20.51 Aligned_cols=39 Identities=21% Similarity=0.269 Sum_probs=21.9
Q ss_pred hHHHHHHHHHH----CCCCEEEEeCCchhhHHHHHhhhcCcccc
Q psy6288 29 GALRLINHLHK----HNIPFAIATSSAKESFELKTSRHKDTLKL 68 (166)
Q Consensus 29 g~~~~l~~l~~----~g~~i~ivS~~~~~~~~~~l~~~~gl~~~ 68 (166)
...++++.+++ .+.+++++|+...........+. |...|
T Consensus 66 ~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~-g~~~~ 108 (147)
T 2zay_A 66 SGMDLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDM-GFIDF 108 (147)
T ss_dssp CHHHHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHHH-TCSEE
T ss_pred CHHHHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHhC-CCCEE
Confidence 34577777775 35677888876544333333332 54433
No 253
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=38.79 E-value=58 Score=19.53 Aligned_cols=24 Identities=17% Similarity=0.530 Sum_probs=13.8
Q ss_pred HHHHHHHHHC--CCCEEEEeCCchhh
Q psy6288 31 LRLINHLHKH--NIPFAIATSSAKES 54 (166)
Q Consensus 31 ~~~l~~l~~~--g~~i~ivS~~~~~~ 54 (166)
.++++.+++. ..+++++|+.....
T Consensus 67 ~~~~~~l~~~~~~~~ii~~t~~~~~~ 92 (130)
T 3eod_A 67 LKLLEHIRNRGDQTPVLVISATENMA 92 (130)
T ss_dssp HHHHHHHHHTTCCCCEEEEECCCCHH
T ss_pred HHHHHHHHhcCCCCCEEEEEcCCCHH
Confidence 4566666554 35666666665443
No 254
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=38.77 E-value=56 Score=20.38 Aligned_cols=38 Identities=13% Similarity=0.197 Sum_probs=22.4
Q ss_pred HHHHHHHHHHC----CCCEEEEeCCchhhHHHHHhhhcCcccc
Q psy6288 30 ALRLINHLHKH----NIPFAIATSSAKESFELKTSRHKDTLKL 68 (166)
Q Consensus 30 ~~~~l~~l~~~----g~~i~ivS~~~~~~~~~~l~~~~gl~~~ 68 (166)
-.++++.+++. +.+++++|+...........+ .|...|
T Consensus 76 g~~l~~~l~~~~~~~~~piiils~~~~~~~~~~~~~-~ga~~~ 117 (149)
T 1i3c_A 76 GREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYE-LHVNCY 117 (149)
T ss_dssp HHHHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHH-TTCSEE
T ss_pred HHHHHHHHHhCcCcCCCeEEEEECCCChHHHHHHHH-cCCcEE
Confidence 45788888764 467888888764433233333 255443
No 255
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A
Probab=38.62 E-value=53 Score=19.38 Aligned_cols=37 Identities=11% Similarity=0.231 Sum_probs=23.1
Q ss_pred HHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccc
Q psy6288 31 LRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFH 70 (166)
Q Consensus 31 ~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd 70 (166)
..+.+.+++.|.++.+..-++ .+. .+.+..|+...|.
T Consensus 66 ~~~~~~~~~~g~~l~l~~~~~--~v~-~~l~~~gl~~~~~ 102 (110)
T 1sbo_A 66 VVILKDAKINGKEFILSSLKE--SIS-RILKLTHLDKIFK 102 (110)
T ss_dssp HHHHHHHHHTTCEEEEESCCH--HHH-HHHHHTTCGGGSC
T ss_pred HHHHHHHHHcCCEEEEEeCCH--HHH-HHHHHhCccceee
Confidence 335566677888887765544 343 4445568888774
No 256
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=38.53 E-value=1.1e+02 Score=22.23 Aligned_cols=29 Identities=24% Similarity=0.205 Sum_probs=19.6
Q ss_pred CceEEEecCHhHHHHHHHcCCeEEEecCCC
Q psy6288 105 SKCLVFEDAPNGVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 105 ~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~ 134 (166)
..+++-.||-. +..|...|.+++.+-.+.
T Consensus 262 a~l~I~~Dsg~-~HlAaa~g~P~v~lfg~t 290 (348)
T 1psw_A 262 CKAIVTNDSGL-MHVAAALNRPLVALYGPS 290 (348)
T ss_dssp SSEEEEESSHH-HHHHHHTTCCEEEEESSS
T ss_pred CCEEEecCCHH-HHHHHHcCCCEEEEECCC
Confidence 33444455544 777888999999886553
No 257
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=38.25 E-value=40 Score=23.41 Aligned_cols=29 Identities=14% Similarity=0.228 Sum_probs=24.6
Q ss_pred cchhHHHHHHHHHH--CCCCEEEEeCCchhh
Q psy6288 26 LAIGALRLINHLHK--HNIPFAIATSSAKES 54 (166)
Q Consensus 26 ~~~g~~~~l~~l~~--~g~~i~ivS~~~~~~ 54 (166)
-.+.+.++++.+++ .|.+++.+|+.....
T Consensus 118 ~t~~~i~~~~~ak~~~~Ga~vI~IT~~~~s~ 148 (220)
T 3etn_A 118 KTREIVELTQLAHNLNPGLKFIVITGNPDSP 148 (220)
T ss_dssp CCHHHHHHHHHHHHHCTTCEEEEEESCTTSH
T ss_pred CCHHHHHHHHHHHhcCCCCeEEEEECCCCCh
Confidence 35788899999999 999999999987553
No 258
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=37.93 E-value=1e+02 Score=21.67 Aligned_cols=99 Identities=10% Similarity=0.077 Sum_probs=54.8
Q ss_pred hHHHHHH---HHHHCCCCEEEEeCCchh--hHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCC
Q psy6288 29 GALRLIN---HLHKHNIPFAIATSSAKE--SFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQ 103 (166)
Q Consensus 29 g~~~~l~---~l~~~g~~i~ivS~~~~~--~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 103 (166)
...+.++ .+++.|.++++..|...+ .+ ..+.. +| ..|.+.-...++.....+--+..+.++.+--.. ..
T Consensus 99 ~~~~~i~~~~~i~~~G~k~gvalnp~tp~~~~-~~~l~-~g---~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~-~~ 172 (227)
T 1tqx_A 99 DTERCIQLAKEIRDNNLWCGISIKPKTDVQKL-VPILD-TN---LINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKK-YK 172 (227)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECTTSCGGGG-HHHHT-TT---CCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHH-CT
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHH-HHHhh-cC---CcCEEEEeeeccCCCCcccchHHHHHHHHHHHh-cc
Confidence 5778999 999999999999864322 22 22222 12 245543322222222223344555544332220 11
Q ss_pred CCceEEEec-CHhHHHHHHHcCCeEEEecCC
Q psy6288 104 PSKCLVFED-APNGVLGAKAAGMSCVMVPDP 133 (166)
Q Consensus 104 ~~~~i~IGD-~~~Di~~a~~~G~~~i~v~~~ 133 (166)
.-.+.+.|- +...+..+.++|...+.+.+.
T Consensus 173 ~~~I~VdGGI~~~ti~~~~~aGAd~~V~Gsa 203 (227)
T 1tqx_A 173 NLNIQVDGGLNIETTEISASHGANIIVAGTS 203 (227)
T ss_dssp TCEEEEESSCCHHHHHHHHHHTCCEEEESHH
T ss_pred CCeEEEECCCCHHHHHHHHHcCCCEEEEeHH
Confidence 223333444 458899999999998888755
No 259
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=37.16 E-value=1.1e+02 Score=21.56 Aligned_cols=98 Identities=12% Similarity=0.145 Sum_probs=54.3
Q ss_pred chhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHH--HHcCCCCCC
Q psy6288 27 AIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAA--KRFDEKPQP 104 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~--~~~~~~~~~ 104 (166)
.+...++++.+++.|.++++..+...+. ..+... ....|.+.--...+..+..+-.+..+.++. ++.. +
T Consensus 98 ~~~~~~~i~~i~~~G~k~gval~p~t~~--e~l~~~---l~~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~lr~~~----~ 168 (228)
T 3ovp_A 98 TENPGALIKDIRENGMKVGLAIKPGTSV--EYLAPW---ANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF----P 168 (228)
T ss_dssp CSCHHHHHHHHHHTTCEEEEEECTTSCG--GGTGGG---GGGCSEEEEESSCTTTCSCCCCGGGHHHHHHHHHHC----T
T ss_pred chhHHHHHHHHHHcCCCEEEEEcCCCCH--HHHHHH---hccCCeEEEeeecCCCCCcccCHHHHHHHHHHHHhc----C
Confidence 3467889999999999999888754332 122222 223455432221112222232344444332 2222 2
Q ss_pred CceEEEec--CHhHHHHHHHcCCeEEEecCC
Q psy6288 105 SKCLVFED--APNGVLGAKAAGMSCVMVPDP 133 (166)
Q Consensus 105 ~~~i~IGD--~~~Di~~a~~~G~~~i~v~~~ 133 (166)
+--+.|+= +...+..+.++|...+.+.+.
T Consensus 169 ~~~I~VdGGI~~~t~~~~~~aGAd~~VvGsa 199 (228)
T 3ovp_A 169 SLDIEVDGGVGPDTVHKCAEAGANMIVSGSA 199 (228)
T ss_dssp TCEEEEESSCSTTTHHHHHHHTCCEEEESHH
T ss_pred CCCEEEeCCcCHHHHHHHHHcCCCEEEEeHH
Confidence 22233433 457889999999999888754
No 260
>3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans}
Probab=37.12 E-value=76 Score=23.21 Aligned_cols=42 Identities=10% Similarity=-0.001 Sum_probs=30.8
Q ss_pred cchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccccc
Q psy6288 26 LAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLF 69 (166)
Q Consensus 26 ~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~f 69 (166)
+.+.+.+-|..|++.|+++++|+++- +.+...+ +.+|+...|
T Consensus 51 ~~~~l~~dIa~L~~~G~~vVlVhgGg-~~i~~~l-~~lg~~~~~ 92 (279)
T 3l86_A 51 LSGDFLSQIKNWQDAGKQLVIVHGGG-FAINKLM-EENQVPVKK 92 (279)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEECCH-HHHHHHH-HHTTCCCCE
T ss_pred HHHHHHHHHHHHHhCCCcEEEEECCH-HHHHHHH-HHcCCCCcc
Confidence 36778888999999999999999985 3343444 446877544
No 261
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=36.52 E-value=21 Score=24.25 Aligned_cols=30 Identities=13% Similarity=0.020 Sum_probs=24.5
Q ss_pred cchhHHHHHHHHHHCCCCEEEEeCCchhhH
Q psy6288 26 LAIGALRLINHLHKHNIPFAIATSSAKESF 55 (166)
Q Consensus 26 ~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~ 55 (166)
--+.+.++++.+++.|.+++.+|+.....+
T Consensus 104 ~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l 133 (201)
T 3fxa_A 104 NTGELLNLIPACKTKGSTLIGVTENPDSVI 133 (201)
T ss_dssp CCHHHHTTHHHHHHHTCEEEEEESCTTSHH
T ss_pred CCHHHHHHHHHHHHcCCeEEEEECCCCChh
Confidence 356778889999999999999999875543
No 262
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=36.51 E-value=50 Score=20.12 Aligned_cols=24 Identities=13% Similarity=0.386 Sum_probs=14.3
Q ss_pred HHHHHHHHHHC--CCCEEEEeCCchh
Q psy6288 30 ALRLINHLHKH--NIPFAIATSSAKE 53 (166)
Q Consensus 30 ~~~~l~~l~~~--g~~i~ivS~~~~~ 53 (166)
..++++.+++. +.+++++|+....
T Consensus 73 g~~~~~~l~~~~~~~~ii~ls~~~~~ 98 (137)
T 2pln_A 73 ALSFVSRIKEKHSSIVVLVSSDNPTS 98 (137)
T ss_dssp HHHHHHHHHHHSTTSEEEEEESSCCH
T ss_pred HHHHHHHHHhcCCCccEEEEeCCCCH
Confidence 34566666553 5667777766543
No 263
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=36.46 E-value=1.6e+02 Score=23.31 Aligned_cols=102 Identities=12% Similarity=0.165 Sum_probs=56.5
Q ss_pred CCccchhHHHHHHHHHHC--CCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHc--
Q psy6288 23 GYNLAIGALRLINHLHKH--NIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRF-- 98 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~--g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~-- 98 (166)
.+.+.+.+...++.+... ++++..+-..... .+.+.+|+...-..++.+. ....+.+...-+...++..
T Consensus 128 ~C~~C~~~~~~l~~~a~~~~~v~~~~vd~~~~~----~~~~~~~i~svPt~~i~g~---~~~~G~~~~~~l~~~l~~~~~ 200 (521)
T 1hyu_A 128 SCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQ----NEITERNVMGVPAVFVNGK---EFGQGRMTLTEIVAKVDTGAE 200 (521)
T ss_dssp TCSSHHHHHHHHHHHHHHCTTEEEEEEETTTCH----HHHHHTTCCSSSEEEETTE---EEEESCCCHHHHHHHHCCSSC
T ss_pred CCcCcHHHHHHHHHHHhHcCceEEEEEechhhH----HHHHHhCCCccCEEEECCE---EEecCCCCHHHHHHHHhhccc
Confidence 567788888888877643 3344444333322 2233346654433344333 3333333333333332222
Q ss_pred -------CCCCCCCceEEEecCHhHHHHHHH---cCCeEEEecC
Q psy6288 99 -------DEKPQPSKCLVFEDAPNGVLGAKA---AGMSCVMVPD 132 (166)
Q Consensus 99 -------~~~~~~~~~i~IGD~~~Di~~a~~---~G~~~i~v~~ 132 (166)
.. .....+++||-++..+.+|.. .|...+.+..
T Consensus 201 ~~~~~~~~~-~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~ 243 (521)
T 1hyu_A 201 KRAAEALNK-RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE 243 (521)
T ss_dssp CHHHHHHHT-SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred ccccccccc-cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 20 234569999999999998865 4888777753
No 264
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=36.20 E-value=69 Score=19.09 Aligned_cols=38 Identities=16% Similarity=0.345 Sum_probs=21.8
Q ss_pred HHHHHHHHHHC--CCCEEEEeCCchhhHHHHHhhhcCcccc
Q psy6288 30 ALRLINHLHKH--NIPFAIATSSAKESFELKTSRHKDTLKL 68 (166)
Q Consensus 30 ~~~~l~~l~~~--g~~i~ivS~~~~~~~~~~l~~~~gl~~~ 68 (166)
-.++++.+++. +.+++++|+...........+. |...|
T Consensus 62 g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~-ga~~~ 101 (126)
T 1dbw_A 62 GVELLRNLGDLKINIPSIVITGHGDVPMAVEAMKA-GAVDF 101 (126)
T ss_dssp HHHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHT-TCSEE
T ss_pred HHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHh-CHHHh
Confidence 35677777764 5678888877644333333332 54433
No 265
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=36.02 E-value=55 Score=19.96 Aligned_cols=24 Identities=13% Similarity=0.239 Sum_probs=12.7
Q ss_pred HHHHHHHHHH----CCCCEEEEeCCchh
Q psy6288 30 ALRLINHLHK----HNIPFAIATSSAKE 53 (166)
Q Consensus 30 ~~~~l~~l~~----~g~~i~ivS~~~~~ 53 (166)
..++++.+++ .+.+++++|+....
T Consensus 69 g~~~~~~l~~~~~~~~~~ii~~s~~~~~ 96 (143)
T 3cnb_A 69 GFSICHRIKSTPATANIIVIAMTGALTD 96 (143)
T ss_dssp HHHHHHHHHTSTTTTTSEEEEEESSCCH
T ss_pred HHHHHHHHHhCccccCCcEEEEeCCCCH
Confidence 3455666655 23456666655433
No 266
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=35.82 E-value=73 Score=19.97 Aligned_cols=26 Identities=19% Similarity=0.253 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHC----CCCEEEEeCCchhh
Q psy6288 29 GALRLINHLHKH----NIPFAIATSSAKES 54 (166)
Q Consensus 29 g~~~~l~~l~~~----g~~i~ivS~~~~~~ 54 (166)
+-.++++.+++. +.+++++|+.....
T Consensus 65 ~g~~~~~~lr~~~~~~~~pii~~s~~~~~~ 94 (154)
T 3gt7_A 65 DGYALCRWLKGQPDLRTIPVILLTILSDPR 94 (154)
T ss_dssp CHHHHHHHHHHSTTTTTSCEEEEECCCSHH
T ss_pred CHHHHHHHHHhCCCcCCCCEEEEECCCChH
Confidence 345667777653 45677777655443
No 267
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=35.56 E-value=16 Score=25.17 Aligned_cols=23 Identities=9% Similarity=-0.091 Sum_probs=13.7
Q ss_pred HHHHHHcCCCCCCCceEEEecCHhH
Q psy6288 92 LVAAKRFDEKPQPSKCLVFEDAPNG 116 (166)
Q Consensus 92 ~~~~~~~~~~~~~~~~i~IGD~~~D 116 (166)
.+.+..-. +++.+++++|||.+.
T Consensus 11 ~~~~~~~~--~~~~~i~~lGDSit~ 33 (232)
T 3dc7_A 11 AMAISNGH--VSFKRPAWLGDSITA 33 (232)
T ss_dssp -------C--BCCSSEEEEESTTTS
T ss_pred HHHhhccC--CCcceEEEEcccccc
Confidence 33444444 788999999999854
No 268
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=35.45 E-value=1.6e+02 Score=23.06 Aligned_cols=44 Identities=14% Similarity=0.103 Sum_probs=34.7
Q ss_pred HHHHHHHHHcCCCCCCCceEEEecCH------------------hHHHHHHHcCCeEEEecCCC
Q psy6288 89 DVFLVAAKRFDEKPQPSKCLVFEDAP------------------NGVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~i~IGD~~------------------~Di~~a~~~G~~~i~v~~~~ 134 (166)
.+...++++.+ ++.+.+++=+|.- ..+..|-++|+.+|.+....
T Consensus 66 ~~v~~~A~~~~--vP~~~VaLHlDHg~~~~w~~~~~~~am~~a~e~i~~aI~aGFtSVMiD~S~ 127 (420)
T 2fiq_A 66 EFVFAIADKVG--FARERIILGGDHLGPNCWQQENVDAAMEKSVELVKAYVRAGFSKIHLDASM 127 (420)
T ss_dssp HHHHHHHHHHT--CCGGGEEEEEEEESSGGGTTSBHHHHHHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred HHHHHHHHHcC--cCcceEEEECCCCCCccccccchhhhhhhHHHHHHHHHHhCCCEEEECCCC
Confidence 55566777778 7777899988865 44778899999999998775
No 269
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=34.66 E-value=31 Score=21.12 Aligned_cols=38 Identities=8% Similarity=0.020 Sum_probs=23.1
Q ss_pred HHHHHHHHHC--CCCEEEEeCCchhhHHHHHhhhcCccccc
Q psy6288 31 LRLINHLHKH--NIPFAIATSSAKESFELKTSRHKDTLKLF 69 (166)
Q Consensus 31 ~~~l~~l~~~--g~~i~ivS~~~~~~~~~~l~~~~gl~~~f 69 (166)
.++++.+++. ..+++++|+...........+ .|..+|+
T Consensus 75 ~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~-~g~~~~l 114 (135)
T 3snk_A 75 KPGIVEARALWATVPLIAVSDELTSEQTRVLVR-MNASDWL 114 (135)
T ss_dssp STTHHHHHGGGTTCCEEEEESCCCHHHHHHHHH-TTCSEEE
T ss_pred HHHHHHHHhhCCCCcEEEEeCCCCHHHHHHHHH-cCcHhhc
Confidence 4577777764 478888888765544444444 3554443
No 270
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum}
Probab=34.59 E-value=66 Score=19.41 Aligned_cols=37 Identities=16% Similarity=0.215 Sum_probs=23.7
Q ss_pred HHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccc
Q psy6288 31 LRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFH 70 (166)
Q Consensus 31 ~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd 70 (166)
..+.+.+++.|.++.++.-++ .+. .+.+..|+...|.
T Consensus 64 ~~~~~~~~~~g~~l~l~~~~~--~v~-~~l~~~gl~~~~~ 100 (117)
T 4hyl_A 64 LSLYRHTSNQQGALVLVGVSE--EIR-DTMEITGFWNFFT 100 (117)
T ss_dssp HHHHHHHHHTTCEEEEECCCH--HHH-HHHHHHTCGGGCE
T ss_pred HHHHHHHHHcCCEEEEEeCCH--HHH-HHHHHhCccceee
Confidence 345566777888888776544 343 3445568888774
No 271
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=33.69 E-value=33 Score=23.22 Aligned_cols=28 Identities=14% Similarity=0.164 Sum_probs=23.6
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeC-Cc
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATS-SA 51 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~-~~ 51 (166)
..-.+...++...++++|.+++.+|+ ..
T Consensus 87 Sg~n~~~ie~A~~ake~G~~vIaITs~~~ 115 (170)
T 3jx9_A 87 DTERSDLLASLARYDAWHTPYSIITLGDV 115 (170)
T ss_dssp CSCCHHHHHHHHHHHHHTCCEEEEESSCC
T ss_pred CCCCHHHHHHHHHHHHCCCcEEEEeCcch
Confidence 34466789999999999999999999 44
No 272
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=33.68 E-value=80 Score=21.34 Aligned_cols=39 Identities=13% Similarity=0.045 Sum_probs=27.2
Q ss_pred chhHHHHHHHHHHCCC-CEEEEeCCchhhHHHHHhhhcCcc
Q psy6288 27 AIGALRLINHLHKHNI-PFAIATSSAKESFELKTSRHKDTL 66 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~-~i~ivS~~~~~~~~~~l~~~~gl~ 66 (166)
.+++.+..+++++.|+ .++.+|.++..... ...+..++.
T Consensus 68 l~~f~~~~~ef~~~g~d~VigIS~D~~~~~~-~f~~~~~l~ 107 (176)
T 4f82_A 68 VPGYVEHAEQLRAAGIDEIWCVSVNDAFVMG-AWGRDLHTA 107 (176)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEESSCHHHHH-HHHHHTTCT
T ss_pred HHHHHHHHHHHHhCCCCEEEEEeCCCHHHHH-HHHHHhCCC
Confidence 4566777888888899 88888888765543 334445664
No 273
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=33.58 E-value=36 Score=25.17 Aligned_cols=31 Identities=6% Similarity=-0.106 Sum_probs=25.9
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchhhH
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKESF 55 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~ 55 (166)
.--|.+.++++.+++.|.+++.+|++....+
T Consensus 151 G~T~~vi~al~~Ak~~Ga~~IaIT~~~~S~L 181 (306)
T 1nri_A 151 GRTPYVIAGLQYAKSLGALTISIASNPKSEM 181 (306)
T ss_dssp SCCHHHHHHHHHHHHHTCEEEEEESSTTCHH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCCCChH
Confidence 3458899999999999999999999876543
No 274
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=33.38 E-value=68 Score=19.11 Aligned_cols=23 Identities=26% Similarity=0.533 Sum_probs=12.6
Q ss_pred HHHHHHHHH----CCCCEEEEeCCchh
Q psy6288 31 LRLINHLHK----HNIPFAIATSSAKE 53 (166)
Q Consensus 31 ~~~l~~l~~----~g~~i~ivS~~~~~ 53 (166)
.++++.+++ ...+++++|+....
T Consensus 65 ~~l~~~l~~~~~~~~~~ii~~s~~~~~ 91 (128)
T 1jbe_A 65 LELLKTIRAXXAMSALPVLMVTAEAKK 91 (128)
T ss_dssp HHHHHHHHC--CCTTCCEEEEESSCCH
T ss_pred HHHHHHHHhhcccCCCcEEEEecCccH
Confidence 456666654 23456666665433
No 275
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=33.21 E-value=77 Score=18.78 Aligned_cols=23 Identities=17% Similarity=0.405 Sum_probs=11.2
Q ss_pred HHHHHHHHH-CCCCEEEEeCCchh
Q psy6288 31 LRLINHLHK-HNIPFAIATSSAKE 53 (166)
Q Consensus 31 ~~~l~~l~~-~g~~i~ivS~~~~~ 53 (166)
.++++.+++ .+.+++++|+....
T Consensus 62 ~~~~~~lr~~~~~~ii~~t~~~~~ 85 (120)
T 3f6p_A 62 VEVCREVRKKYDMPIIMLTAKDSE 85 (120)
T ss_dssp HHHHHHHHTTCCSCEEEEEESSCH
T ss_pred HHHHHHHHhcCCCCEEEEECCCCh
Confidence 345555543 24455555554433
No 276
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=33.00 E-value=48 Score=20.02 Aligned_cols=25 Identities=20% Similarity=0.372 Sum_probs=14.7
Q ss_pred hHHHHHHHHHHC----CCCEEEEeCCchh
Q psy6288 29 GALRLINHLHKH----NIPFAIATSSAKE 53 (166)
Q Consensus 29 g~~~~l~~l~~~----g~~i~ivS~~~~~ 53 (166)
+-.++++.+++. +.+++++|+....
T Consensus 61 ~g~~~~~~l~~~~~~~~~pii~~s~~~~~ 89 (133)
T 3nhm_A 61 DGYALCGHFRSEPTLKHIPVIFVSGYAPR 89 (133)
T ss_dssp CHHHHHHHHHHSTTTTTCCEEEEESCCC-
T ss_pred CHHHHHHHHHhCCccCCCCEEEEeCCCcH
Confidence 345666777653 4567777766533
No 277
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=32.99 E-value=1.4e+02 Score=21.67 Aligned_cols=25 Identities=12% Similarity=0.082 Sum_probs=18.0
Q ss_pred chhHHHHHHHHHHCCC-CEEEEeCCc
Q psy6288 27 AIGALRLINHLHKHNI-PFAIATSSA 51 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~-~i~ivS~~~ 51 (166)
+.+...+.+.|.+.|. +++++++..
T Consensus 159 ~~~~~~a~~~L~~~G~~~I~~i~~~~ 184 (333)
T 3jvd_A 159 EAGFFQLTESVLGGSGMNIAALVGEE 184 (333)
T ss_dssp HHHHHHHHHHHCCSSSCEEEEEESCT
T ss_pred HHHHHHHHHHHHHCCCCeEEEEeCCC
Confidence 4567778888887776 477777663
No 278
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=32.95 E-value=50 Score=24.78 Aligned_cols=51 Identities=20% Similarity=0.154 Sum_probs=36.9
Q ss_pred cCCCCChHHHHHHHHHcCCCCCCCceEEEecCHhHHHHHH------HcCCeEEEecCCC
Q psy6288 82 KQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAK------AAGMSCVMVPDPT 134 (166)
Q Consensus 82 ~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~------~~G~~~i~v~~~~ 134 (166)
...-|.++.|...++++| ++.+..|+|=|......++| -.|..-|.|..|.
T Consensus 92 ph~LP~~~~f~~~l~~lG--I~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg 148 (327)
T 3utn_X 92 PHMFPTKKVFDDAMSNLG--VQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF 148 (327)
T ss_dssp TTCCCCHHHHHHHHHHTT--CCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH
T ss_pred CCCCcCHHHHHHHHHHcC--CCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH
Confidence 345688999999999999 88888777756544444443 4798877776653
No 279
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=32.65 E-value=65 Score=19.50 Aligned_cols=26 Identities=12% Similarity=0.303 Sum_probs=15.9
Q ss_pred hHHHHHHHHHHC---CCCEEEEeCCchhh
Q psy6288 29 GALRLINHLHKH---NIPFAIATSSAKES 54 (166)
Q Consensus 29 g~~~~l~~l~~~---g~~i~ivS~~~~~~ 54 (166)
+-.++++.+++. ..+++++|+.....
T Consensus 66 ~g~~~~~~l~~~~~~~~~ii~~s~~~~~~ 94 (136)
T 3hdv_A 66 SGLDLIRTIRASERAALSIIVVSGDTDVE 94 (136)
T ss_dssp CHHHHHHHHHTSTTTTCEEEEEESSCCHH
T ss_pred CHHHHHHHHHhcCCCCCCEEEEeCCCChH
Confidence 445677777654 35677777665443
No 280
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=32.52 E-value=61 Score=19.65 Aligned_cols=25 Identities=24% Similarity=0.302 Sum_probs=14.7
Q ss_pred HHHHHHHHHH-CCCCEEEEeCCchhh
Q psy6288 30 ALRLINHLHK-HNIPFAIATSSAKES 54 (166)
Q Consensus 30 ~~~~l~~l~~-~g~~i~ivS~~~~~~ 54 (166)
..++++.+++ .+.+++++|+.....
T Consensus 70 g~~~~~~l~~~~~~~ii~ls~~~~~~ 95 (140)
T 3cg0_A 70 GVETAARLAAGCNLPIIFITSSQDVE 95 (140)
T ss_dssp HHHHHHHHHHHSCCCEEEEECCCCHH
T ss_pred HHHHHHHHHhCCCCCEEEEecCCCHH
Confidence 3456666654 356777777665443
No 281
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A
Probab=32.42 E-value=81 Score=18.77 Aligned_cols=37 Identities=8% Similarity=0.076 Sum_probs=23.3
Q ss_pred HHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccccc
Q psy6288 30 ALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLF 69 (166)
Q Consensus 30 ~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~f 69 (166)
+..+.+.+++.|.++.+..-++ .+... .+..|+...|
T Consensus 64 L~~~~~~~~~~g~~l~l~~~~~--~v~~~-l~~~gl~~~~ 100 (116)
T 1th8_B 64 ILGRYKQIKNVGGQMVVCAVSP--AVKRL-FDMSGLFKII 100 (116)
T ss_dssp HHHHHHHHHHTTCCEEEESCCH--HHHHH-HHHHTGGGTS
T ss_pred HHHHHHHHHHhCCeEEEEeCCH--HHHHH-HHHhCCceeE
Confidence 3445666778899887766544 34334 4546888776
No 282
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=32.41 E-value=1.3e+02 Score=21.18 Aligned_cols=20 Identities=0% Similarity=-0.024 Sum_probs=11.9
Q ss_pred hHHHHHHHHHHCCCCEEEEe
Q psy6288 29 GALRLINHLHKHNIPFAIAT 48 (166)
Q Consensus 29 g~~~~l~~l~~~g~~i~ivS 48 (166)
.....++.+++.|++++++.
T Consensus 70 ~~~~~~~~~~~~~iPvV~~~ 89 (306)
T 8abp_A 70 LGSAIVAKARGYDMKVIAVD 89 (306)
T ss_dssp GHHHHHHHHHHTTCEEEEES
T ss_pred hhHHHHHHHHHCCCcEEEeC
Confidence 33445666666666666665
No 283
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=32.24 E-value=53 Score=24.46 Aligned_cols=30 Identities=3% Similarity=-0.081 Sum_probs=25.5
Q ss_pred cchhHHHHHHHHHHCCCCEEEEeCCchhhH
Q psy6288 26 LAIGALRLINHLHKHNIPFAIATSSAKESF 55 (166)
Q Consensus 26 ~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~ 55 (166)
--+++.++++.+++.|.+++.+||.....+
T Consensus 86 ~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~L 115 (329)
T 3eua_A 86 NTPETVKAAAFARGKGALTIAMTFKPESPL 115 (329)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEESCTTSHH
T ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCChH
Confidence 357888999999999999999999876644
No 284
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=32.23 E-value=49 Score=20.32 Aligned_cols=24 Identities=21% Similarity=0.462 Sum_probs=14.2
Q ss_pred HHHHHHHHHHC----CCCEEEEeCCchh
Q psy6288 30 ALRLINHLHKH----NIPFAIATSSAKE 53 (166)
Q Consensus 30 ~~~~l~~l~~~----g~~i~ivS~~~~~ 53 (166)
-.++++.+++. +.+++++|+....
T Consensus 77 g~~~~~~l~~~~~~~~~~ii~~t~~~~~ 104 (149)
T 1k66_A 77 GREVLQEIKQDEVLKKIPVVIMTTSSNP 104 (149)
T ss_dssp HHHHHHHHTTSTTGGGSCEEEEESCCCH
T ss_pred HHHHHHHHHhCcccCCCeEEEEeCCCCH
Confidence 34666666653 3567777766543
No 285
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=32.06 E-value=74 Score=19.76 Aligned_cols=26 Identities=8% Similarity=0.250 Sum_probs=14.7
Q ss_pred hHHHHHHHHHHC--CCCEEEEeCCchhh
Q psy6288 29 GALRLINHLHKH--NIPFAIATSSAKES 54 (166)
Q Consensus 29 g~~~~l~~l~~~--g~~i~ivS~~~~~~ 54 (166)
...++++.+++. +.+++++|+.....
T Consensus 80 ~g~~~~~~l~~~~~~~~ii~ls~~~~~~ 107 (150)
T 4e7p_A 80 TGLEVLEWIRSEKLETKVVVVTTFKRAG 107 (150)
T ss_dssp CHHHHHHHHHHTTCSCEEEEEESCCCHH
T ss_pred cHHHHHHHHHHhCCCCeEEEEeCCCCHH
Confidence 345666666653 45666666665443
No 286
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=31.94 E-value=88 Score=19.84 Aligned_cols=38 Identities=8% Similarity=0.060 Sum_probs=24.7
Q ss_pred chhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCc
Q psy6288 27 AIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDT 65 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl 65 (166)
.|.+.++.+++++.|+.++.+|..+.......+.+ +++
T Consensus 55 ~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~-~~~ 92 (163)
T 3gkn_A 55 GLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAK-QGF 92 (163)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-HCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-hCC
Confidence 45566667777777888888888766655444433 354
No 287
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=31.66 E-value=79 Score=19.12 Aligned_cols=37 Identities=22% Similarity=0.282 Sum_probs=21.4
Q ss_pred HHHHHHHHHHC--CCCEEEEeCCchhhHHHHHhhhcCccc
Q psy6288 30 ALRLINHLHKH--NIPFAIATSSAKESFELKTSRHKDTLK 67 (166)
Q Consensus 30 ~~~~l~~l~~~--g~~i~ivS~~~~~~~~~~l~~~~gl~~ 67 (166)
-.++++.+++. +.+++++|+...........+ .|...
T Consensus 64 g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~-~ga~~ 102 (133)
T 3b2n_A 64 GLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVV-NDVDA 102 (133)
T ss_dssp HHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHH-TTCSE
T ss_pred HHHHHHHHHHHCCCCcEEEEecCCCHHHHHHHHH-cCCcE
Confidence 35778888763 567888887764433333333 25433
No 288
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=31.57 E-value=69 Score=19.72 Aligned_cols=41 Identities=17% Similarity=0.238 Sum_probs=24.9
Q ss_pred hhHHHHHHHHHHC--CCCEEEEeCCchhhHHHHHhhhcCccccc
Q psy6288 28 IGALRLINHLHKH--NIPFAIATSSAKESFELKTSRHKDTLKLF 69 (166)
Q Consensus 28 ~g~~~~l~~l~~~--g~~i~ivS~~~~~~~~~~l~~~~gl~~~f 69 (166)
.+..++++.+++. ..+++++|+...........+ .|..+|+
T Consensus 80 ~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~-~ga~~~l 122 (146)
T 4dad_A 80 TAELAAIEKLSRLHPGLTCLLVTTDASSQTLLDAMR-AGVRDVL 122 (146)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHT-TTEEEEE
T ss_pred ccHHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHH-hCCceeE
Confidence 3456778888764 578888988765544334444 3554443
No 289
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=31.01 E-value=83 Score=18.59 Aligned_cols=23 Identities=17% Similarity=0.326 Sum_probs=14.8
Q ss_pred HHHHHHHHH--CCCCEEEEeCCchh
Q psy6288 31 LRLINHLHK--HNIPFAIATSSAKE 53 (166)
Q Consensus 31 ~~~l~~l~~--~g~~i~ivS~~~~~ 53 (166)
.++++.+++ .+.+++++|+....
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~~~ 87 (124)
T 1srr_A 63 IEILKRMKVIDENIRVIIMTAYGEL 87 (124)
T ss_dssp HHHHHHHHHHCTTCEEEEEESSCCH
T ss_pred HHHHHHHHHhCCCCCEEEEEccCch
Confidence 466777765 35677777776544
No 290
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=30.78 E-value=56 Score=24.85 Aligned_cols=30 Identities=10% Similarity=-0.057 Sum_probs=25.2
Q ss_pred cchhHHHHHHHHHHCCCCEEEEeCCchhhH
Q psy6288 26 LAIGALRLINHLHKHNIPFAIATSSAKESF 55 (166)
Q Consensus 26 ~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~ 55 (166)
--+.+.++++.+++.|.+++.+|+.....+
T Consensus 119 ~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~L 148 (375)
T 2zj3_A 119 ETADTLMGLRYCKERGALTVGITNTVGSSI 148 (375)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEESCTTCHH
T ss_pred CCHHHHHHHHHHHHcCCcEEEEECCCCChH
Confidence 357888999999999999999999875544
No 291
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=30.73 E-value=1.8e+02 Score=22.52 Aligned_cols=33 Identities=9% Similarity=0.082 Sum_probs=26.0
Q ss_pred CCccc-hhHHHHHHHHHH-CCC-----CEEEEeCCchhhH
Q psy6288 23 GYNLA-IGALRLINHLHK-HNI-----PFAIATSSAKESF 55 (166)
Q Consensus 23 ~~~~~-~g~~~~l~~l~~-~g~-----~i~ivS~~~~~~~ 55 (166)
+..+. +.+.++++.+++ .|+ ++.+.||+..+.+
T Consensus 180 EPLln~d~v~~~i~~lk~~~Gl~~s~r~itlsTnG~~p~i 219 (404)
T 3rfa_A 180 EPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPAL 219 (404)
T ss_dssp CGGGCHHHHHHHHHHHHSTTTTCCCGGGEEEEESCCHHHH
T ss_pred CcccCHHHHHHHHHHHHhhcCcCcCCCceEEECCCcHHHH
Confidence 44445 578999999998 599 9999999987544
No 292
>1dmg_A Ribosomal protein L4; alpha-beta, ribosome, RNA, S10 operon, gene regulation; HET: CIT; 1.70A {Thermotoga maritima} SCOP: c.22.1.1
Probab=30.65 E-value=1.4e+02 Score=21.08 Aligned_cols=51 Identities=12% Similarity=0.191 Sum_probs=36.1
Q ss_pred CccCCCCChHHHHHHHHHcCCCCCCCceEEEecCH-----hHHHHHHHc-CCeEEEecC
Q psy6288 80 EVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAP-----NGVLGAKAA-GMSCVMVPD 132 (166)
Q Consensus 80 ~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i~IGD~~-----~Di~~a~~~-G~~~i~v~~ 132 (166)
+.....|++..+..+++.++ +....+++|-+.. +=..++++. |+..+.+..
T Consensus 127 ~~~~~~~KTK~~~~~L~~l~--~~~~~~LiV~~~~~~~~~n~~~a~RNip~v~v~~~~~ 183 (225)
T 1dmg_A 127 DLKLERPKTKSLKEILQNLQ--LSDKKTLIVLPWKEEGYMNVKLSGRNLPDVKVIIADN 183 (225)
T ss_dssp CCCCSSCCHHHHHHHHHHTT--CTTSCEEEEECCCSHHHHHHHHHHTTCTTEEEEECCC
T ss_pred ecccCCCCHHHHHHHHHHcC--CCCCCEEEEECCCccchHHHHHHHhCCCCCEEEecCC
Confidence 45667889999999999999 7645677775443 335777776 556666554
No 293
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=30.42 E-value=93 Score=18.84 Aligned_cols=37 Identities=14% Similarity=0.051 Sum_probs=21.5
Q ss_pred HHHHHHHHH-C--CCCEEEEeCCchhhHHHHHhhhcCcccc
Q psy6288 31 LRLINHLHK-H--NIPFAIATSSAKESFELKTSRHKDTLKL 68 (166)
Q Consensus 31 ~~~l~~l~~-~--g~~i~ivS~~~~~~~~~~l~~~~gl~~~ 68 (166)
.++++.+++ . ..+++++|+...........+ .|...|
T Consensus 68 ~~~~~~lr~~~~~~~~ii~lt~~~~~~~~~~~~~-~ga~~~ 107 (133)
T 2r25_B 68 LLSTKMIRRDLGYTSPIVALTAFADDSNIKECLE-SGMNGF 107 (133)
T ss_dssp HHHHHHHHHHSCCCSCEEEEESCCSHHHHHHHHH-TTCSEE
T ss_pred HHHHHHHHhhcCCCCCEEEEECCCCHHHHHHHHH-cCCCEE
Confidence 577788875 2 457888888765543333334 254443
No 294
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=30.11 E-value=58 Score=24.64 Aligned_cols=31 Identities=6% Similarity=-0.065 Sum_probs=25.5
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchhhH
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKESF 55 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~ 55 (166)
.--+.+.++++.+++.|.+++.+|+.....+
T Consensus 108 G~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~L 138 (367)
T 2poc_A 108 GETADSILALQYCLERGALTVGIVNSVGSSM 138 (367)
T ss_dssp SCCHHHHHHHHHHHHTTCEEEEEESSTTSHH
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCChH
Confidence 3357888999999999999999999875544
No 295
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=30.03 E-value=84 Score=19.50 Aligned_cols=38 Identities=0% Similarity=0.038 Sum_probs=19.9
Q ss_pred hHHHHHHHHHHC--CCCEEEEeCCchhhHHHHHhhhcCccc
Q psy6288 29 GALRLINHLHKH--NIPFAIATSSAKESFELKTSRHKDTLK 67 (166)
Q Consensus 29 g~~~~l~~l~~~--g~~i~ivS~~~~~~~~~~l~~~~gl~~ 67 (166)
+..++++.+++. ..+++++|+...........+ .|...
T Consensus 75 ~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~-~g~~~ 114 (152)
T 3eul_A 75 DGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQ-QGAAG 114 (152)
T ss_dssp CHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHH-TTCSE
T ss_pred CHHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHH-cCCCE
Confidence 345667777654 355777776654433333333 24433
No 296
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=29.91 E-value=75 Score=19.10 Aligned_cols=40 Identities=8% Similarity=0.184 Sum_probs=21.0
Q ss_pred hhHHHHHHHHHHC--CCCEEEEeCCchhhHHHHHhhhcCcccc
Q psy6288 28 IGALRLINHLHKH--NIPFAIATSSAKESFELKTSRHKDTLKL 68 (166)
Q Consensus 28 ~g~~~~l~~l~~~--g~~i~ivS~~~~~~~~~~l~~~~gl~~~ 68 (166)
.+-.++++.+++. +.+++++|+...........+ .|...|
T Consensus 59 ~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~-~g~~~~ 100 (134)
T 3f6c_A 59 VNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCAD-AGANGF 100 (134)
T ss_dssp SCHHHHHHHHHHTTCCSEEEEEECC---CTHHHHHH-TTCSEE
T ss_pred CChHHHHHHHHhcCCCCeEEEEeCCCChHHHHHHHH-hCCCEE
Confidence 3455777777764 456777777665443334434 255443
No 297
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=29.88 E-value=1.1e+02 Score=19.28 Aligned_cols=38 Identities=8% Similarity=0.072 Sum_probs=27.1
Q ss_pred hhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcc
Q psy6288 28 IGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTL 66 (166)
Q Consensus 28 ~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~ 66 (166)
.+...+++.|++.|+.++=+++...+........ .|+.
T Consensus 61 ~dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~a~~-~GLp 98 (120)
T 3ghf_A 61 VNWPELHKIVTSTGLRIIGVSGCKDASLKVEIDR-MGLP 98 (120)
T ss_dssp CCHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHH-HTCC
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHHH-CCCC
Confidence 4688899999999999888888664534344444 4774
No 298
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=29.61 E-value=94 Score=18.91 Aligned_cols=23 Identities=13% Similarity=0.215 Sum_probs=13.1
Q ss_pred HHHHHHHHHC-CCCEEEEeCCchh
Q psy6288 31 LRLINHLHKH-NIPFAIATSSAKE 53 (166)
Q Consensus 31 ~~~l~~l~~~-g~~i~ivS~~~~~ 53 (166)
.++++.+++. ..+++++|+....
T Consensus 64 ~~l~~~l~~~~~~~ii~ls~~~~~ 87 (136)
T 2qzj_A 64 WTLCKKIRNVTTCPIVYMTYINED 87 (136)
T ss_dssp HHHHHHHHTTCCCCEEEEESCCCH
T ss_pred HHHHHHHccCCCCCEEEEEcCCCH
Confidence 4566666543 4566666665433
No 299
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=29.46 E-value=58 Score=24.45 Aligned_cols=29 Identities=7% Similarity=0.075 Sum_probs=24.5
Q ss_pred chhHHHHHHHHHHCCCCEEEEeCCchhhH
Q psy6288 27 AIGALRLINHLHKHNIPFAIATSSAKESF 55 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~i~ivS~~~~~~~ 55 (166)
-+++.++++.+++.|.+++.+||.....+
T Consensus 104 T~e~l~a~~~ak~~Ga~~iaIT~~~~S~L 132 (344)
T 3fj1_A 104 SPDIVAMTRNAGRDGALCVALTNDAASPL 132 (344)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESCTTSHH
T ss_pred CHHHHHHHHHHHHCCCcEEEEECCCCChH
Confidence 47788899999999999999999875543
No 300
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=29.19 E-value=75 Score=19.77 Aligned_cols=38 Identities=18% Similarity=0.254 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHC--CCCEEEEeCCchhhHHHHHhhhcCccc
Q psy6288 29 GALRLINHLHKH--NIPFAIATSSAKESFELKTSRHKDTLK 67 (166)
Q Consensus 29 g~~~~l~~l~~~--g~~i~ivS~~~~~~~~~~l~~~~gl~~ 67 (166)
...++++.+++. +.+++++|+...........+ .|..+
T Consensus 65 ~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~-~g~~~ 104 (153)
T 3cz5_A 65 GGIEATRHIRQWDGAARILIFTMHQGSAFALKAFE-AGASG 104 (153)
T ss_dssp CHHHHHHHHHHHCTTCCEEEEESCCSHHHHHHHHH-TTCSE
T ss_pred CHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHH-CCCcE
Confidence 345677777653 567888887754433333333 25443
No 301
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=29.15 E-value=73 Score=19.44 Aligned_cols=23 Identities=17% Similarity=0.379 Sum_probs=13.2
Q ss_pred HHHHHHHHHC--CCCEEEEeCCchh
Q psy6288 31 LRLINHLHKH--NIPFAIATSSAKE 53 (166)
Q Consensus 31 ~~~l~~l~~~--g~~i~ivS~~~~~ 53 (166)
.++++.+++. +.+++++|+....
T Consensus 63 ~~~~~~l~~~~~~~pii~ls~~~~~ 87 (142)
T 2qxy_A 63 LNLIRRIREEFPDTKVAVLSAYVDK 87 (142)
T ss_dssp HHHHHHHHHHCTTCEEEEEESCCCH
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCH
Confidence 4556666543 4566666666544
No 302
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=29.10 E-value=91 Score=20.94 Aligned_cols=41 Identities=7% Similarity=0.084 Sum_probs=24.5
Q ss_pred hhHHHHHHHHHH------CCCCEEEEeCCc-hhhHHHHHhhhcCccccc
Q psy6288 28 IGALRLINHLHK------HNIPFAIATSSA-KESFELKTSRHKDTLKLF 69 (166)
Q Consensus 28 ~g~~~~l~~l~~------~g~~i~ivS~~~-~~~~~~~l~~~~gl~~~f 69 (166)
.+-.++++.+++ ...+++++|+.. .........+. |...|+
T Consensus 132 ~~G~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~-Ga~~~l 179 (206)
T 3mm4_A 132 MDGYEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQA-GMDAFL 179 (206)
T ss_dssp SCHHHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHH-TCSEEE
T ss_pred CCHHHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhC-CCCEEE
Confidence 345678888876 467899999875 33332333343 554443
No 303
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=29.08 E-value=31 Score=20.45 Aligned_cols=27 Identities=7% Similarity=0.124 Sum_probs=19.2
Q ss_pred CccchhHHHHHHHHHHCCC-CEEEEeCC
Q psy6288 24 YNLAIGALRLINHLHKHNI-PFAIATSS 50 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~-~i~ivS~~ 50 (166)
...|..+.+.+..|++.|+ ++.++|..
T Consensus 67 ~~~y~~vv~vmd~l~~aG~~~v~l~t~~ 94 (99)
T 2pfu_A 67 TVDYETLMKVMDTLHQAGYLKIGLVGEE 94 (99)
T ss_dssp TCCHHHHHHHHHHHHHTCCCCEECTTCC
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEecC
Confidence 4567777888888888877 56666643
No 304
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=28.93 E-value=68 Score=19.61 Aligned_cols=26 Identities=12% Similarity=0.279 Sum_probs=15.3
Q ss_pred hHHHHHHHHHHC--CCCEEEEeCCchhh
Q psy6288 29 GALRLINHLHKH--NIPFAIATSSAKES 54 (166)
Q Consensus 29 g~~~~l~~l~~~--g~~i~ivS~~~~~~ 54 (166)
+..++++.+++. ..+++++|+.....
T Consensus 63 ~g~~~~~~l~~~~~~~~ii~ls~~~~~~ 90 (143)
T 3jte_A 63 SGMDILREIKKITPHMAVIILTGHGDLD 90 (143)
T ss_dssp CHHHHHHHHHHHCTTCEEEEEECTTCHH
T ss_pred cHHHHHHHHHHhCCCCeEEEEECCCCHH
Confidence 345666666653 45677777665443
No 305
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=28.43 E-value=78 Score=19.93 Aligned_cols=38 Identities=11% Similarity=0.140 Sum_probs=21.2
Q ss_pred hHHHHHHHHHHC--CCCEEEEeCCchhhHHHHHhhhcCccc
Q psy6288 29 GALRLINHLHKH--NIPFAIATSSAKESFELKTSRHKDTLK 67 (166)
Q Consensus 29 g~~~~l~~l~~~--g~~i~ivS~~~~~~~~~~l~~~~gl~~ 67 (166)
+..++++.+++. ..+++++|+...........+ .|...
T Consensus 97 ~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~-~g~~~ 136 (157)
T 3hzh_A 97 DGITCLSNIMEFDKNARVIMISALGKEQLVKDCLI-KGAKT 136 (157)
T ss_dssp CHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHH-TTCSE
T ss_pred cHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHH-cCCCE
Confidence 445677777653 467777777654443333333 25433
No 306
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=28.35 E-value=72 Score=19.46 Aligned_cols=21 Identities=14% Similarity=0.360 Sum_probs=9.8
Q ss_pred HHHHHHHHHC----CCCEEEEeCCc
Q psy6288 31 LRLINHLHKH----NIPFAIATSSA 51 (166)
Q Consensus 31 ~~~l~~l~~~----g~~i~ivS~~~ 51 (166)
.++++.+++. +.+++++|+..
T Consensus 75 ~~~~~~l~~~~~~~~~~ii~ls~~~ 99 (143)
T 2qvg_A 75 IEFLKELRDDSSFTDIEVFVLTAAY 99 (143)
T ss_dssp HHHHHHHTTSGGGTTCEEEEEESCC
T ss_pred HHHHHHHHcCccccCCcEEEEeCCC
Confidence 3455555432 34455555544
No 307
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=28.33 E-value=54 Score=24.52 Aligned_cols=31 Identities=16% Similarity=-0.002 Sum_probs=25.5
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchhhH
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKESF 55 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~ 55 (166)
.--+.+.++++.+++.|.+++.+|+.....+
T Consensus 111 G~T~e~l~a~~~ak~~Ga~vIaIT~~~~S~L 141 (342)
T 1j5x_A 111 GNTTEVLLANDVLKKRNHRTIGITIEEESRL 141 (342)
T ss_dssp SCCHHHHHHHHHHHHTTEEEEEEESCTTSHH
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCCHH
Confidence 3457888999999999999999999875544
No 308
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=28.11 E-value=98 Score=18.63 Aligned_cols=23 Identities=22% Similarity=0.231 Sum_probs=13.4
Q ss_pred HHHHHHHHH--CCCCEEEEeCCchh
Q psy6288 31 LRLINHLHK--HNIPFAIATSSAKE 53 (166)
Q Consensus 31 ~~~l~~l~~--~g~~i~ivS~~~~~ 53 (166)
.++++.+++ .+.+++++|+....
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~~~ 87 (132)
T 3crn_A 63 TELLEKAHKLRPGMKKIMVTGYASL 87 (132)
T ss_dssp HHHHHHHHHHCTTSEEEEEESCCCH
T ss_pred HHHHHHHHhhCCCCcEEEEeccccH
Confidence 456666654 24566777766543
No 309
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=27.94 E-value=37 Score=23.89 Aligned_cols=28 Identities=7% Similarity=-0.075 Sum_probs=24.2
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCch
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAK 52 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~ 52 (166)
.--+.+.++++.+++.|.+++.+|+...
T Consensus 119 G~t~~~i~~~~~Ak~~G~~vI~IT~~~~ 146 (243)
T 3cvj_A 119 GRNTVPVEMAIESRNIGAKVIAMTSMKH 146 (243)
T ss_dssp CCSHHHHHHHHHHHHHTCEEEEEECHHH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4468899999999999999999999753
No 310
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=27.86 E-value=50 Score=19.69 Aligned_cols=24 Identities=29% Similarity=0.685 Sum_probs=17.1
Q ss_pred HHHHHHHHHHC----CCCEEEEeCCchh
Q psy6288 30 ALRLINHLHKH----NIPFAIATSSAKE 53 (166)
Q Consensus 30 ~~~~l~~l~~~----g~~i~ivS~~~~~ 53 (166)
-.++++.+++. +.+++++|+....
T Consensus 61 g~~~~~~l~~~~~~~~~~ii~~s~~~~~ 88 (127)
T 2jba_A 61 GIQFIKHLRRESMTRDIPVVMLTARGEE 88 (127)
T ss_dssp HHHHHHHHHTSTTTTTSCEEEEEETTHH
T ss_pred HHHHHHHHHhCcccCCCCEEEEeCCCCH
Confidence 35788888753 5688888887644
No 311
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=27.77 E-value=64 Score=24.23 Aligned_cols=30 Identities=10% Similarity=0.086 Sum_probs=24.6
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchhh
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKES 54 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~ 54 (166)
.--+.+.++++.+++.|.+++.+|+.....
T Consensus 113 G~t~e~~~a~~~ak~~Ga~vi~IT~~~~S~ 142 (355)
T 2a3n_A 113 GDTKESVAIAEWCKAQGIRVVAITKNADSP 142 (355)
T ss_dssp SCCHHHHHHHHHHHHTTCEEEEEESCTTSH
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEECCCCCh
Confidence 335788899999999999999999986443
No 312
>3o65_A Putative ataxin-3-like protein; papain-like fold, hydrolase-protein complex; 2.70A {Homo sapiens} PDB: 2aga_A 1yzb_A 2jri_A 2dos_A
Probab=27.73 E-value=25 Score=24.42 Aligned_cols=44 Identities=11% Similarity=0.156 Sum_probs=29.1
Q ss_pred hhhhcCCccchh--HHHHHHHHHHCCCCEEEEeCCchhhHHHHHhh
Q psy6288 18 DGLLLGYNLAIG--ALRLINHLHKHNIPFAIATSSAKESFELKTSR 61 (166)
Q Consensus 18 ~~~~~~~~~~~g--~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~ 61 (166)
++.+....+..+ +..+|+.|++.|+.+++|.+..+..-...+.+
T Consensus 135 dS~l~~P~~i~~~yL~~fL~ql~~eg~siFvV~g~lP~~~ad~~~~ 180 (191)
T 3o65_A 135 NSLLAGPELISDTCLANFLARLQQQAYSVFVVKGDLPDCEADQLLQ 180 (191)
T ss_dssp CTTSSSCEEECHHHHHHHHGGGGSTTEEEEEEESCCCCCHHHHHHC
T ss_pred cCCCCCCCCcChHHHHHHHHHHHHCCCEEEEEcCCCCCCCHHHHHH
Confidence 344444444444 47788889999999999998865544344433
No 313
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=27.40 E-value=67 Score=18.95 Aligned_cols=22 Identities=27% Similarity=0.394 Sum_probs=11.3
Q ss_pred HHHHHHHHHC----CCCEEEEeCCch
Q psy6288 31 LRLINHLHKH----NIPFAIATSSAK 52 (166)
Q Consensus 31 ~~~l~~l~~~----g~~i~ivS~~~~ 52 (166)
.++++.+++. ..+++++|+...
T Consensus 61 ~~~~~~l~~~~~~~~~~ii~~s~~~~ 86 (124)
T 1mb3_A 61 LEVTKWLKEDDDLAHIPVVAVTAFAM 86 (124)
T ss_dssp HHHHHHHHHSTTTTTSCEEEEC----
T ss_pred HHHHHHHHcCccccCCcEEEEECCCC
Confidence 4667777652 456777776543
No 314
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=27.20 E-value=62 Score=23.68 Aligned_cols=26 Identities=19% Similarity=0.255 Sum_probs=23.0
Q ss_pred cchhHHHHHHHHHHCCCCEEEEeCCc
Q psy6288 26 LAIGALRLINHLHKHNIPFAIATSSA 51 (166)
Q Consensus 26 ~~~g~~~~l~~l~~~g~~i~ivS~~~ 51 (166)
--+++.++++.+++.|.+++.+||..
T Consensus 91 ~T~e~~~a~~~ak~~g~~~iaIT~~~ 116 (302)
T 1tzb_A 91 NTIETLYTVEYAKRRRIPAVAITTGG 116 (302)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEESST
T ss_pred CCHHHHHHHHHHHHCCCeEEEECCCc
Confidence 35778899999999999999999987
No 315
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=27.20 E-value=76 Score=20.16 Aligned_cols=32 Identities=22% Similarity=0.377 Sum_probs=24.4
Q ss_pred CceEEE-ecCHhHHHHHHH-cCCeEEEecCCCCC
Q psy6288 105 SKCLVF-EDAPNGVLGAKA-AGMSCVMVPDPTVP 136 (166)
Q Consensus 105 ~~~i~I-GD~~~Di~~a~~-~G~~~i~v~~~~~~ 136 (166)
..++.+ ||...-+..|-+ .+.+++.++.|...
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~ 86 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEP 86 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCC
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCC
Confidence 468888 998866666666 78889988888644
No 316
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=27.14 E-value=1.8e+02 Score=21.02 Aligned_cols=29 Identities=24% Similarity=0.103 Sum_probs=19.7
Q ss_pred CceEEEecCHhHHHHHHHcCCeEEEecCCC
Q psy6288 105 SKCLVFEDAPNGVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 105 ~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~ 134 (166)
...++-.||-. +..|...|.+++.+-.+.
T Consensus 254 a~l~I~~DSG~-~HlAaa~g~P~v~lfg~t 282 (326)
T 2gt1_A 254 AKFVVSVDTGL-SHLTAALDRPNITVYGPT 282 (326)
T ss_dssp CSEEEEESSHH-HHHHHHTTCCEEEEESSS
T ss_pred CCEEEecCCcH-HHHHHHcCCCEEEEECCC
Confidence 34555555554 777888999999886543
No 317
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=27.03 E-value=2.3e+02 Score=22.37 Aligned_cols=103 Identities=11% Similarity=-0.033 Sum_probs=50.1
Q ss_pred hHHHHHHHHHHC-CCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCcc----CCCCC----hHHHHHHHHHcC
Q psy6288 29 GALRLINHLHKH-NIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVK----QGKPA----PDVFLVAAKRFD 99 (166)
Q Consensus 29 g~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~----~~Kp~----~~~~~~~~~~~~ 99 (166)
.++++|+.-++. ++-+.-+.......++..+..+.......=...+.. .+. ..... ..+...++++.+
T Consensus 7 ~mkelL~~ak~g~~~gi~av~~~n~e~i~Ail~aAee~~sPVIIe~t~~---qv~~~gGYtG~~p~~f~~~V~~~A~~~~ 83 (450)
T 3txv_A 7 HLIDIARWSERPGPRGIPSICSAHPLVIEAAMLRAHREKAPVLIEATCN---QVNQDGGYTGMTPEDFTRFVGAIADRIE 83 (450)
T ss_dssp --------------CCEEEECCCCHHHHHHHHHHHHHSCSCEEEEEETT---TSCTTCTTTTCCHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHhCCCcEEEEeCcCCHHHHHHHHHHHHHhCCCEEEEcChh---hHhhcCCCCCCCHHHHHHHHHHHHHHcC
Confidence 356777777662 344444444455555444443322222210112222 221 11111 244456677788
Q ss_pred CCCCCCceEEEecCH------------------hHHHHHHHcCCeEEEecCCCCC
Q psy6288 100 EKPQPSKCLVFEDAP------------------NGVLGAKAAGMSCVMVPDPTVP 136 (166)
Q Consensus 100 ~~~~~~~~i~IGD~~------------------~Di~~a~~~G~~~i~v~~~~~~ 136 (166)
++.+.+++=+|.. ..+..|-++|+.+|.+......
T Consensus 84 --vPv~pV~LhlDHg~~~~w~~~~~~~am~~a~e~i~~aI~AGFtSVMiD~S~~p 136 (450)
T 3txv_A 84 --FPREKILLGGDHLGPNPWKHLPADEAMAKAEAMITAYAKAGFTKLHLDTSMGC 136 (450)
T ss_dssp --CCGGGEEEEEEEESSGGGTTSCHHHHHHHHHHHHHHHHTTTCCEEEECCCBCC
T ss_pred --cCcccEEEECCCCCCcccccccHHHHHHHHHHHHHHHHHcCCCEEEECCCCCc
Confidence 8888899988854 5678888899999999887543
No 318
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=26.86 E-value=1.7e+02 Score=20.59 Aligned_cols=41 Identities=10% Similarity=0.118 Sum_probs=28.7
Q ss_pred HHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecC
Q psy6288 31 LRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGS 76 (166)
Q Consensus 31 ~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~ 76 (166)
.++++.+++.|+++.+-|-+....+...+.+ +|. |.|++-.
T Consensus 184 ~~~v~~~~~~G~~v~~wTvn~~~~~~~~l~~-~Gv----dgIiTD~ 224 (248)
T 1zcc_A 184 PGIIEASRKAGLEIMVYYGGDDMAVHREIAT-SDV----DYINLDR 224 (248)
T ss_dssp HHHHHHHHHHTCEEEEECCCCCHHHHHHHHH-SSC----SEEEESC
T ss_pred HHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCC----CEEEECC
Confidence 5688999999999999998876666431444 364 5565544
No 319
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=26.76 E-value=94 Score=18.87 Aligned_cols=24 Identities=17% Similarity=0.239 Sum_probs=13.3
Q ss_pred HHHHHHHHHH------CCCCEEEEeCCchh
Q psy6288 30 ALRLINHLHK------HNIPFAIATSSAKE 53 (166)
Q Consensus 30 ~~~~l~~l~~------~g~~i~ivS~~~~~ 53 (166)
-.++++.+++ ...+++++|+....
T Consensus 75 g~~~~~~l~~~~~~~~~~~~ii~~t~~~~~ 104 (146)
T 3ilh_A 75 GWELIDLFKQHFQPMKNKSIVCLLSSSLDP 104 (146)
T ss_dssp HHHHHHHHHHHCGGGTTTCEEEEECSSCCH
T ss_pred HHHHHHHHHHhhhhccCCCeEEEEeCCCCh
Confidence 4456666655 34556666665543
No 320
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=26.51 E-value=97 Score=18.68 Aligned_cols=24 Identities=17% Similarity=0.383 Sum_probs=14.0
Q ss_pred HHHHHHHHHHC--CCCEEEEeCCchh
Q psy6288 30 ALRLINHLHKH--NIPFAIATSSAKE 53 (166)
Q Consensus 30 ~~~~l~~l~~~--g~~i~ivS~~~~~ 53 (166)
..++++.+++. +.+++++|+....
T Consensus 67 g~~~~~~l~~~~~~~~ii~ls~~~~~ 92 (140)
T 2qr3_A 67 GLFWLHEIKRQYRDLPVVLFTAYADI 92 (140)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEEGGGH
T ss_pred HHHHHHHHHhhCcCCCEEEEECCCCH
Confidence 34566666542 4667777766543
No 321
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=26.41 E-value=1.7e+02 Score=20.57 Aligned_cols=99 Identities=13% Similarity=0.144 Sum_probs=55.5
Q ss_pred chhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHH------HHHcCC
Q psy6288 27 AIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVA------AKRFDE 100 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~------~~~~~~ 100 (166)
-+...++++.+++.|.++++.-|...+ . ..+.. +....|.+.--..++..+..+--+..++++ .++.+
T Consensus 92 ~~~~~~~i~~i~~~G~k~gv~lnp~tp-~-~~~~~---~l~~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~- 165 (231)
T 3ctl_A 92 NGQAFRLIDEIRRHDMKVGLILNPETP-V-EAMKY---YIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREG- 165 (231)
T ss_dssp TTTHHHHHHHHHHTTCEEEEEECTTCC-G-GGGTT---TGGGCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHT-
T ss_pred CccHHHHHHHHHHcCCeEEEEEECCCc-H-HHHHH---HHhcCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccC-
Confidence 356789999999999999998865433 1 12222 223456654222122222222233333322 22222
Q ss_pred CCCCCceEEEecC--HhHHHHHHHcCCeEEEec-CCC
Q psy6288 101 KPQPSKCLVFEDA--PNGVLGAKAAGMSCVMVP-DPT 134 (166)
Q Consensus 101 ~~~~~~~i~IGD~--~~Di~~a~~~G~~~i~v~-~~~ 134 (166)
.+--+.|+-+ ...+..+.++|...+.+. ...
T Consensus 166 ---~~~~I~VdGGI~~~~~~~~~~aGAd~~V~G~sai 199 (231)
T 3ctl_A 166 ---LEYEIEVDGSCNQATYEKLMAAGADVFIVGTSGL 199 (231)
T ss_dssp ---CCCEEEEESCCSTTTHHHHHHHTCCEEEECTTTT
T ss_pred ---CCceEEEECCcCHHHHHHHHHcCCCEEEEccHHH
Confidence 1223555554 478889999999999998 653
No 322
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=26.26 E-value=1e+02 Score=17.96 Aligned_cols=25 Identities=12% Similarity=0.305 Sum_probs=14.9
Q ss_pred HHHHHHHHHH--CCCCEEEEeCCchhh
Q psy6288 30 ALRLINHLHK--HNIPFAIATSSAKES 54 (166)
Q Consensus 30 ~~~~l~~l~~--~g~~i~ivS~~~~~~ 54 (166)
-.++++.+++ .+.+++++|+.....
T Consensus 62 g~~~~~~l~~~~~~~~ii~~s~~~~~~ 88 (120)
T 1tmy_A 62 GIDAIKEIMKIDPNAKIIVCSAMGQQA 88 (120)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECTTCHH
T ss_pred HHHHHHHHHhhCCCCeEEEEeCCCCHH
Confidence 3466676654 246777777665443
No 323
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=26.21 E-value=1e+02 Score=17.95 Aligned_cols=24 Identities=21% Similarity=0.371 Sum_probs=14.8
Q ss_pred HHHHHHHHHHC--CCCEEEEeCCchh
Q psy6288 30 ALRLINHLHKH--NIPFAIATSSAKE 53 (166)
Q Consensus 30 ~~~~l~~l~~~--g~~i~ivS~~~~~ 53 (166)
-.++++.+++. ..+++++|+....
T Consensus 59 g~~~~~~l~~~~~~~~ii~~s~~~~~ 84 (121)
T 2pl1_A 59 GLSLIRRWRSNDVSLPILVLTARESW 84 (121)
T ss_dssp HHHHHHHHHHTTCCSCEEEEESCCCH
T ss_pred HHHHHHHHHhcCCCCCEEEEecCCCH
Confidence 34667777653 4567777776544
No 324
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=26.11 E-value=1.7e+02 Score=20.55 Aligned_cols=25 Identities=20% Similarity=0.209 Sum_probs=19.3
Q ss_pred chhHHHHHHHHHHCCC-CEEEEeCCc
Q psy6288 27 AIGALRLINHLHKHNI-PFAIATSSA 51 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~-~i~ivS~~~ 51 (166)
+.+...+.+.|.+.|. +++++++..
T Consensus 111 ~~~~~~a~~~L~~~G~~~I~~i~~~~ 136 (294)
T 3qk7_A 111 HAGASLAVKRLLELGHQRIAFVSTDA 136 (294)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEEESS
T ss_pred HHHHHHHHHHHHHCCCceEEEEeCCc
Confidence 4577788899988877 588888664
No 325
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=25.98 E-value=1.1e+02 Score=18.54 Aligned_cols=38 Identities=8% Similarity=0.189 Sum_probs=21.1
Q ss_pred HHHHHHHHHHC--CCCEEEEeCCchhhHHHHHhhhcCcccc
Q psy6288 30 ALRLINHLHKH--NIPFAIATSSAKESFELKTSRHKDTLKL 68 (166)
Q Consensus 30 ~~~~l~~l~~~--g~~i~ivS~~~~~~~~~~l~~~~gl~~~ 68 (166)
-.++++.+++. ..+++++|+...........+. |..+|
T Consensus 63 g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~-ga~~~ 102 (137)
T 3cfy_A 63 GEDVLDWINQNDIPTSVIIATAHGSVDLAVNLIQK-GAEDF 102 (137)
T ss_dssp HHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHT-TCSEE
T ss_pred HHHHHHHHHhcCCCCCEEEEEecCcHHHHHHHHHC-CccEE
Confidence 35677777764 4567778776544333333332 54433
No 326
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A
Probab=25.84 E-value=91 Score=18.68 Aligned_cols=36 Identities=11% Similarity=0.001 Sum_probs=21.8
Q ss_pred HHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccccc
Q psy6288 31 LRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLF 69 (166)
Q Consensus 31 ~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~f 69 (166)
..+.+.+++.|.++.+..-++ .+ ..+.+..|+...|
T Consensus 64 ~~~~~~~~~~g~~l~l~~~~~--~v-~~~l~~~gl~~~~ 99 (117)
T 1h4x_A 64 LGRMRELEAVAGRTILLNPSP--TM-RKVFQFSGLGPWM 99 (117)
T ss_dssp HHHHHHHHTTTCEEEEESCCH--HH-HHHHHHTTCGGGE
T ss_pred HHHHHHHHHcCCEEEEEeCCH--HH-HHHHHHhCCceEE
Confidence 345566667788887765544 33 3334556887766
No 327
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=25.83 E-value=69 Score=19.09 Aligned_cols=19 Identities=5% Similarity=0.067 Sum_probs=7.7
Q ss_pred hHHHHHHHHHHCCCCEEEE
Q psy6288 29 GALRLINHLHKHNIPFAIA 47 (166)
Q Consensus 29 g~~~~l~~l~~~g~~i~iv 47 (166)
...++++.+++....++++
T Consensus 39 ~~~~a~~~~~~~~~dlvl~ 57 (129)
T 1p6q_A 39 DGEQGMKIMAQNPHHLVIS 57 (129)
T ss_dssp SHHHHHHHHHTSCCSEEEE
T ss_pred CHHHHHHHHHcCCCCEEEE
Confidence 3344444444433344433
No 328
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=25.76 E-value=85 Score=20.63 Aligned_cols=38 Identities=8% Similarity=0.054 Sum_probs=23.3
Q ss_pred chhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCc
Q psy6288 27 AIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDT 65 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl 65 (166)
.|.+.++.+++++.|+.++.+|..+.......+.+ +++
T Consensus 71 l~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~-~~~ 108 (179)
T 3ixr_A 71 GLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAK-QGF 108 (179)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHH-HTC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCC
Confidence 45556666667777788888887765555444333 344
No 329
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=25.61 E-value=1e+02 Score=20.08 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=22.5
Q ss_pred HHHHHHHHHH--CCCCEEEEeCCchhhHHHHHhhhcCccccc
Q psy6288 30 ALRLINHLHK--HNIPFAIATSSAKESFELKTSRHKDTLKLF 69 (166)
Q Consensus 30 ~~~~l~~l~~--~g~~i~ivS~~~~~~~~~~l~~~~gl~~~f 69 (166)
-.++++.+++ .+.+++++|+...........+. |..+|+
T Consensus 66 g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~a~~~-Ga~~~l 106 (184)
T 3rqi_A 66 GLSLIAPLCDLQPDARILVLTGYASIATAVQAVKD-GADNYL 106 (184)
T ss_dssp SHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHH-TCSEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHh-CHHHhe
Confidence 3567777765 35678888887655443344443 554433
No 330
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=25.57 E-value=54 Score=24.68 Aligned_cols=30 Identities=0% Similarity=-0.131 Sum_probs=25.1
Q ss_pred cchhHHHHHHHHHHCCCCEEEEeCCchhhH
Q psy6288 26 LAIGALRLINHLHKHNIPFAIATSSAKESF 55 (166)
Q Consensus 26 ~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~ 55 (166)
--+.+.++++.+++.|.+++.+||.....+
T Consensus 101 ~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~L 130 (347)
T 3fkj_A 101 NTAETVAAARVAREKGAATIGLVYQPDTPL 130 (347)
T ss_dssp CCHHHHHHHHHHHHHTCEEEEEESSTTCHH
T ss_pred CcHHHHHHHHHHHHCCCcEEEEeCCCCChH
Confidence 357888999999999999999999876544
No 331
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=25.45 E-value=1.8e+02 Score=20.48 Aligned_cols=40 Identities=8% Similarity=0.147 Sum_probs=27.5
Q ss_pred HHHHHHHHHCCCCEEEEeC----CchhhHHHHHhhhcCcccccceEEecC
Q psy6288 31 LRLINHLHKHNIPFAIATS----SAKESFELKTSRHKDTLKLFHHVVLGS 76 (166)
Q Consensus 31 ~~~l~~l~~~g~~i~ivS~----~~~~~~~~~l~~~~gl~~~fd~v~~~~ 76 (166)
.++++.+++.|+++.+-|- +....+. .+.+ +|. |.|++-.
T Consensus 202 ~~~v~~~~~~G~~v~~wTv~~~~n~~~~~~-~l~~-~Gv----dgI~TD~ 245 (258)
T 2o55_A 202 KEQVCTAHEKGLSVTVWMPWIFDDSEEDWK-KCLE-LQV----DLICSNY 245 (258)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCCCHHHHH-HHHH-HTC----SEEEESC
T ss_pred HHHHHHHHHCCCEEEEeeCCCCCCCHHHHH-HHHH-cCC----CEEEeCC
Confidence 4688999999999999998 7766553 3334 354 5555533
No 332
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=25.44 E-value=61 Score=24.41 Aligned_cols=28 Identities=4% Similarity=0.017 Sum_probs=24.1
Q ss_pred chhHHHHHHHHHHCCCCEEEEeCCchhh
Q psy6288 27 AIGALRLINHLHKHNIPFAIATSSAKES 54 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~i~ivS~~~~~~ 54 (166)
-+++.++++.+++.|.+++.+||.....
T Consensus 95 T~e~l~a~~~ak~~ga~~iaIT~~~~S~ 122 (352)
T 3g68_A 95 SYSTYNAMKLAEDKGCKIASMAGCKNAL 122 (352)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESSTTCG
T ss_pred CHHHHHHHHHHHHCCCCEEEEeCCCCCh
Confidence 4778899999999999999999987554
No 333
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=25.27 E-value=1.7e+02 Score=21.32 Aligned_cols=32 Identities=19% Similarity=0.065 Sum_probs=21.4
Q ss_pred CCCceEEEecCH---hHHHHHHHcCCeEEEecCCC
Q psy6288 103 QPSKCLVFEDAP---NGVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 103 ~~~~~i~IGD~~---~Di~~a~~~G~~~i~v~~~~ 134 (166)
.|+=++..|+.. .-..+|+..|++.+.+..+.
T Consensus 91 ~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~ 125 (376)
T 1v4v_A 91 GADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGL 125 (376)
T ss_dssp TCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCC
T ss_pred CCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 377666667643 23567788899988776543
No 334
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=25.16 E-value=1.2e+02 Score=18.17 Aligned_cols=37 Identities=11% Similarity=0.102 Sum_probs=27.6
Q ss_pred CccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHh
Q psy6288 24 YNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTS 60 (166)
Q Consensus 24 ~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~ 60 (166)
..+.-|..+.++.+++...+++|+.++..+....++.
T Consensus 14 gk~v~G~~~v~kai~~gka~lViiA~D~~~~~~~~i~ 50 (99)
T 3j21_Z 14 GKVVLGSNETIRLAKTGGAKLIIVAKNAPKEIKDDIY 50 (99)
T ss_dssp SCEEESHHHHHHHHHHTCCSEEEEECCCCHHHHHHHH
T ss_pred CCEeECHHHHHHHHHcCCccEEEEeCCCCHHHHHHHH
Confidence 5677889999999988778888888776555555553
No 335
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus}
Probab=25.09 E-value=1.2e+02 Score=18.44 Aligned_cols=35 Identities=9% Similarity=0.099 Sum_probs=22.6
Q ss_pred HHHHHHH-CCCCEEEEeCCchhhHHHHHhhhcCcccccc
Q psy6288 33 LINHLHK-HNIPFAIATSSAKESFELKTSRHKDTLKLFH 70 (166)
Q Consensus 33 ~l~~l~~-~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd 70 (166)
+.+.+++ .|.++.++.-+. .+ ..+.+..|+...|.
T Consensus 72 ~~~~~~~~~g~~l~l~~~~~--~v-~~~l~~~gl~~~~~ 107 (121)
T 3t6o_A 72 GWKRIKEDQQGVFALCSVSP--YC-VEVLQVTHIDEVWP 107 (121)
T ss_dssp HHHHHTTSTTCEEEEESCCH--HH-HHHHTTCSGGGGSC
T ss_pred HHHHHHHhcCCEEEEEeCCH--HH-HHHHHHhCccceec
Confidence 4555667 788888775543 34 34456568888774
No 336
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A*
Probab=24.95 E-value=77 Score=19.62 Aligned_cols=36 Identities=8% Similarity=0.214 Sum_probs=22.3
Q ss_pred HHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccccc
Q psy6288 31 LRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLF 69 (166)
Q Consensus 31 ~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~f 69 (166)
..+.+.+++.|.++.++.-++ .+. .+.+..|+...|
T Consensus 74 ~~~~~~~~~~g~~l~l~~~~~--~v~-~~l~~~gl~~~~ 109 (125)
T 2ka5_A 74 VNILKSISSSGGFFALVSPNE--KVE-RVLSLTNLDRIV 109 (125)
T ss_dssp HHHHHHHHHHTCEEEEECCCH--HHH-HHHHHTTSTTTS
T ss_pred HHHHHHHHHcCCEEEEEeCCH--HHH-HHHHHcCCCceE
Confidence 345566667788887775544 343 334556887776
No 337
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=24.76 E-value=1.9e+02 Score=20.47 Aligned_cols=25 Identities=16% Similarity=0.026 Sum_probs=18.9
Q ss_pred chhHHHHHHHHHHCCC-CEEEEeCCc
Q psy6288 27 AIGALRLINHLHKHNI-PFAIATSSA 51 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~-~i~ivS~~~ 51 (166)
+.+...+.+.|.+.|. +++++++..
T Consensus 129 ~~~g~~a~~~L~~~G~~~I~~i~~~~ 154 (305)
T 3huu_A 129 IDAAYQLTQYLYHLGHRHILFLQESG 154 (305)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred HHHHHHHHHHHHHCCCCeEEEEcCCc
Confidence 4577788889988877 588887653
No 338
>1xhk_A Putative protease LA homolog; LON protease, ATP dependent, catalytic DYAD, hydrolase; HET: MES; 1.90A {Methanocaldococcus jannaschii} SCOP: d.14.1.10
Probab=24.69 E-value=38 Score=23.16 Aligned_cols=55 Identities=18% Similarity=0.326 Sum_probs=36.5
Q ss_pred CceEEEec-C-----------HhHHHHHHHcCCeEEEecCCCCCcc-ccc-ccchhhCChhhhhhhhcC
Q psy6288 105 SKCLVFED-A-----------PNGVLGAKAAGMSCVMVPDPTVPKH-RTE-AADLVLNSLEEFKPELYG 159 (166)
Q Consensus 105 ~~~i~IGD-~-----------~~Di~~a~~~G~~~i~v~~~~~~~~-~~~-~~~~~~~~~~~l~~~l~~ 159 (166)
++++|+|. + ..=+.+|++.|++.+.+........ ... -.-+.++++.|+.+++..
T Consensus 117 ~~~a~tGEl~L~G~V~pV~Gi~~ki~~A~~~G~~~viiP~~N~~e~~~~~~i~v~~v~~l~ea~~~l~~ 185 (187)
T 1xhk_A 117 QDFAITGSLDLSGNVLAIGGVNEKIEAAKRYGFKRVIIPEANMIDVIETEGIEIIPVKTLDEIVPLVFD 185 (187)
T ss_dssp SSEEECCEECTTCBEECCSCHHHHHHHHHHTTCSEEEEEGGGGGGCCCCCSSEEEEESBHHHHHHHHBC
T ss_pred CCEEEEEEECCCceEEeeCCHHHHHHHHHHcCCCEEEeccchhhhhcccCCcEEEEcCCHHHHHHHHhc
Confidence 77888775 2 2347889999999998876532221 111 223468899999888764
No 339
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis}
Probab=24.41 E-value=60 Score=23.81 Aligned_cols=23 Identities=13% Similarity=0.226 Sum_probs=18.4
Q ss_pred hhHHHHHHHHHHCCCCEEEEeCC
Q psy6288 28 IGALRLINHLHKHNIPFAIATSS 50 (166)
Q Consensus 28 ~g~~~~l~~l~~~g~~i~ivS~~ 50 (166)
..+.+.|..+++.|++++||+++
T Consensus 75 ~~la~~I~~l~~~G~~vviV~Gg 97 (281)
T 3nwy_A 75 AQVARQIADVVRGGVQIAVVIGG 97 (281)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHCCCeEEEEECC
Confidence 34567788888999999999953
No 340
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=24.38 E-value=86 Score=19.71 Aligned_cols=41 Identities=17% Similarity=-0.020 Sum_probs=28.3
Q ss_pred HHHHHHHcCCCCCCCceEEEec-----CHhHHHHHHHcCCeEEEecCC
Q psy6288 91 FLVAAKRFDEKPQPSKCLVFED-----APNGVLGAKAAGMSCVMVPDP 133 (166)
Q Consensus 91 ~~~~~~~~~~~~~~~~~i~IGD-----~~~Di~~a~~~G~~~i~v~~~ 133 (166)
+...+...| ++++++++|-- ..+=++-|-+.|--++.+.|-
T Consensus 46 ~~~~L~~~G--l~~~rll~v~~~~~~d~lwa~EqaLrsg~~~aVl~wl 91 (119)
T 1ofu_X 46 THEWLRRAG--LNRERILLLQAKDNAAALALSCEALRLGRSHTVVSWL 91 (119)
T ss_dssp CHHHHHHTT--CCTTSEEEECCSSHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CHHHHHHcC--CChHHEEEEECCCcHHHHHHHHHHHhcCCccEEEECC
Confidence 455667789 89999999874 334455555677776666663
No 341
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=24.17 E-value=64 Score=24.50 Aligned_cols=30 Identities=10% Similarity=0.024 Sum_probs=24.9
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchhh
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKES 54 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~ 54 (166)
.--+.+.++++.+++.|.+++.+||.....
T Consensus 108 GeT~e~l~a~~~ak~~Ga~~IaIT~~~~S~ 137 (366)
T 3knz_A 108 GGSLSTLAAMERARNVGHITASMAGVAPAT 137 (366)
T ss_dssp SCCHHHHHHHHHHHHTTCEEEEEESSSSCG
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEECCCCCh
Confidence 345788899999999999999999986553
No 342
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=24.04 E-value=2.2e+02 Score=21.10 Aligned_cols=21 Identities=14% Similarity=0.276 Sum_probs=17.6
Q ss_pred HHHHHHHHHCCCCEEEEeCCc
Q psy6288 31 LRLINHLHKHNIPFAIATSSA 51 (166)
Q Consensus 31 ~~~l~~l~~~g~~i~ivS~~~ 51 (166)
..+.+.|++.|+.+.++|+..
T Consensus 38 l~La~~L~~~Gh~V~v~~~~~ 58 (415)
T 3rsc_A 38 LTVVTELVRRGHRVSYVTAGG 58 (415)
T ss_dssp HHHHHHHHHTTCEEEEEECGG
T ss_pred HHHHHHHHHCCCEEEEEeCHH
Confidence 467888999999999999654
No 343
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=23.97 E-value=71 Score=23.88 Aligned_cols=28 Identities=4% Similarity=-0.090 Sum_probs=24.0
Q ss_pred chhHHHHHHHHHHCCCCEEEEeCCchhh
Q psy6288 27 AIGALRLINHLHKHNIPFAIATSSAKES 54 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~i~ivS~~~~~~ 54 (166)
-+.+.++++.+++.|.+++.+||.....
T Consensus 103 T~e~~~a~~~ak~~g~~~i~IT~~~~S~ 130 (334)
T 3hba_A 103 SPDILAQARMAKNAGAFCVALVNDETAP 130 (334)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESCTTSG
T ss_pred CHHHHHHHHHHHHcCCcEEEEeCCCCCh
Confidence 4778889999999999999999987553
No 344
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=23.93 E-value=2.5e+02 Score=21.68 Aligned_cols=47 Identities=15% Similarity=0.012 Sum_probs=31.4
Q ss_pred CCChHHHHHHHHHcCCCCCCCceEEEec--CHhHHHHHHHcCCeEEEecCC
Q psy6288 85 KPAPDVFLVAAKRFDEKPQPSKCLVFED--APNGVLGAKAAGMSCVMVPDP 133 (166)
Q Consensus 85 Kp~~~~~~~~~~~~~~~~~~~~~i~IGD--~~~Di~~a~~~G~~~i~v~~~ 133 (166)
.|....+..+.+... ...=.++.-|. +..|+..|..+|...+.+.+.
T Consensus 229 ~p~~~al~~v~~~~~--~~~IPVIA~GGI~~~~di~kalalGAd~V~vGt~ 277 (400)
T 3ffs_A 229 VPQITAIEKCSSVAS--KFGIPIIADGGIRYSGDIGKALAVGASSVMIGSI 277 (400)
T ss_dssp CCHHHHHHHHHHHHT--TTTCCEEEESCCCSHHHHHHHHTTTCSEEEECGG
T ss_pred hhHHHHHHHHHHHHH--hcCCCEEecCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 455566666666543 11223555555 469999999999999998764
No 345
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=23.88 E-value=1.9e+02 Score=20.16 Aligned_cols=25 Identities=8% Similarity=-0.134 Sum_probs=18.3
Q ss_pred chhHHHHHHHHHHCCC-CEEEEeCCc
Q psy6288 27 AIGALRLINHLHKHNI-PFAIATSSA 51 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~-~i~ivS~~~ 51 (166)
+.+...+.+.|.+.|. +++++++..
T Consensus 112 ~~~~~~a~~~L~~~G~~~i~~i~~~~ 137 (289)
T 3g85_A 112 YKMGEKASLLFAKKRYKSAAAILTES 137 (289)
T ss_dssp HHHHHHHHHHHHHTTCCBCEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 4577778888888776 477777653
No 346
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A*
Probab=23.87 E-value=73 Score=19.80 Aligned_cols=36 Identities=22% Similarity=0.314 Sum_probs=21.0
Q ss_pred HHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCccccc
Q psy6288 31 LRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLF 69 (166)
Q Consensus 31 ~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~f 69 (166)
.++.+.+++.|.++.++.-+. .+...+ +..|+...+
T Consensus 71 ~~~~~~~~~~g~~l~l~~~~~--~v~~~l-~~~gl~~~~ 106 (130)
T 4dgh_A 71 EEMIQSFHKRGIKVLISGANS--RVSQKL-VKAGIVKLV 106 (130)
T ss_dssp HHHHHHHHTTTCEEEEECCCH--HHHHHH-HHTTHHHHH
T ss_pred HHHHHHHHHCCCEEEEEcCCH--HHHHHH-HHcCChhhc
Confidence 345666677888887765544 333343 445776544
No 347
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=23.86 E-value=1.4e+02 Score=20.55 Aligned_cols=29 Identities=7% Similarity=-0.020 Sum_probs=18.7
Q ss_pred chhHHHHHHHHHHCCC-CEEEEeCCchhhH
Q psy6288 27 AIGALRLINHLHKHNI-PFAIATSSAKESF 55 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~-~i~ivS~~~~~~~ 55 (166)
.|.+.++.+.+++.|+ .++.+|..+....
T Consensus 54 ~~~l~~~~~~~~~~~~~~vv~is~d~~~~~ 83 (241)
T 1nm3_A 54 LPRYNELAPVFKKYGVDDILVVSVNDTFVM 83 (241)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEESSCHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEcCCHHHH
Confidence 4555566666677788 7777777664444
No 348
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=23.77 E-value=2.1e+02 Score=20.69 Aligned_cols=103 Identities=11% Similarity=-0.007 Sum_probs=48.3
Q ss_pred CCccchhHHHHHHHHHHCCCCEE-EEeCCch-hhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCC
Q psy6288 23 GYNLAIGALRLINHLHKHNIPFA-IATSSAK-ESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDE 100 (166)
Q Consensus 23 ~~~~~~g~~~~l~~l~~~g~~i~-ivS~~~~-~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 100 (166)
...+.+...++.+.++++|+..+ +++..+. +.+ ..+.+. ..-|=+.++.. +-.+..+..+......+++..
T Consensus 130 ~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri-~~i~~~---~~gfvY~vS~~--GvTG~~~~~~~~~~~~v~~vr- 202 (267)
T 3vnd_A 130 ADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTL-KMVSEQ---GEGYTYLLSRA--GVTGTESKAGEPIENILTQLA- 202 (267)
T ss_dssp TTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHH-HHHHHH---CCSCEEESCCC--CCC--------CHHHHHHHHH-
T ss_pred CCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHH-HHHHHh---CCCcEEEEecC--CCCCCccCCcHHHHHHHHHHH-
Confidence 44556778889999999998754 6665443 333 233222 11121221111 012222211221222223322
Q ss_pred CCCCCceEEEecCHhH---HHHHHHcCCeEEEecCC
Q psy6288 101 KPQPSKCLVFEDAPNG---VLGAKAAGMSCVMVPDP 133 (166)
Q Consensus 101 ~~~~~~~i~IGD~~~D---i~~a~~~G~~~i~v~~~ 133 (166)
--.+--+.+|=+.++ +..+...|...+.|...
T Consensus 203 -~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSa 237 (267)
T 3vnd_A 203 -EFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISGSA 237 (267)
T ss_dssp -TTTCCCEEECSSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred -HhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECHH
Confidence 112345677877644 43345778888888654
No 349
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=23.76 E-value=1.2e+02 Score=17.78 Aligned_cols=23 Identities=26% Similarity=0.375 Sum_probs=12.2
Q ss_pred HHHHHHHHH-CCCCEEEEeCCchh
Q psy6288 31 LRLINHLHK-HNIPFAIATSSAKE 53 (166)
Q Consensus 31 ~~~l~~l~~-~g~~i~ivS~~~~~ 53 (166)
.++++.+++ .+.+++++|+....
T Consensus 63 ~~~~~~l~~~~~~~ii~~s~~~~~ 86 (123)
T 1xhf_A 63 LLLARELREQANVALMFLTGRDNE 86 (123)
T ss_dssp HHHHHHHHHHCCCEEEEEESCCSH
T ss_pred HHHHHHHHhCCCCcEEEEECCCCh
Confidence 355555544 34556666655433
No 350
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=23.66 E-value=2.2e+02 Score=20.88 Aligned_cols=22 Identities=18% Similarity=0.312 Sum_probs=17.9
Q ss_pred HHHHHHHHHHCCCCEEEEeCCc
Q psy6288 30 ALRLINHLHKHNIPFAIATSSA 51 (166)
Q Consensus 30 ~~~~l~~l~~~g~~i~ivS~~~ 51 (166)
+..+.+.|++.|+.+.++|+..
T Consensus 21 ~~~La~~L~~~GheV~v~~~~~ 42 (402)
T 3ia7_A 21 SLGLVSELARRGHRITYVTTPL 42 (402)
T ss_dssp HHHHHHHHHHTTCEEEEEECHH
T ss_pred HHHHHHHHHhCCCEEEEEcCHH
Confidence 3467788999999999999743
No 351
>1uj8_A ORF3, hypothetical protein YFHJ; iron-sulfur cluster, ISC, structural genomics, unknown function; 1.75A {Escherichia coli} SCOP: a.159.5.1 PDB: 2bzt_A
Probab=23.62 E-value=32 Score=20.03 Aligned_cols=24 Identities=17% Similarity=0.244 Sum_probs=19.7
Q ss_pred ccchhhCChhhhhhhhcCCCCCCC
Q psy6288 142 AADLVLNSLEEFKPELYGLPPFED 165 (166)
Q Consensus 142 ~~~~~~~~~~~l~~~l~~~~~~~~ 165 (166)
..+..--.|.+|.++++.|+.|.+
T Consensus 32 d~DP~tvRFTdL~~wV~~L~~FdD 55 (77)
T 1uj8_A 32 DLDPKTVRFTDMHQWICDLEDFDD 55 (77)
T ss_dssp TSCGGGCCHHHHHHHHHTSTTBCS
T ss_pred CCCcCEeeHHHHHHHHHhCCCcCC
Confidence 345566789999999999999976
No 352
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=23.48 E-value=1.5e+02 Score=22.01 Aligned_cols=40 Identities=10% Similarity=0.150 Sum_probs=19.6
Q ss_pred HHHHHHHHHcCCCCCCCceEEEecCHhHHHHHHHcCCeEEEecCCC
Q psy6288 89 DVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPT 134 (166)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~i~IGD~~~Di~~a~~~G~~~i~v~~~~ 134 (166)
.-+..+.++.+ . ++.+| |+..|+...+=.|..+|+|+.|.
T Consensus 225 ~rL~eia~~~~--~---~ty~I-e~~~el~~~wl~~~~~VGITAGA 264 (297)
T 3dnf_A 225 RRLYYISKELN--P---NTYHI-ETAEELQPEWFRGVKRVGISAGA 264 (297)
T ss_dssp HHHHHHHHHHC--S---SEEEE-SSGGGCCGGGGTTCSEEEEEECT
T ss_pred HHHHHHHHhcC--C---CEEEe-CChHHCCHHHhCCCCEEEEeecC
Confidence 34455555555 2 13333 34444444444566666666664
No 353
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=23.42 E-value=1.1e+02 Score=18.18 Aligned_cols=24 Identities=13% Similarity=0.221 Sum_probs=14.1
Q ss_pred HHHHHHHHHHC---CCCEEEEeCCchh
Q psy6288 30 ALRLINHLHKH---NIPFAIATSSAKE 53 (166)
Q Consensus 30 ~~~~l~~l~~~---g~~i~ivS~~~~~ 53 (166)
-.++++.+++. ..+++++|+....
T Consensus 63 g~~~~~~l~~~~~~~~~ii~ls~~~~~ 89 (130)
T 1dz3_A 63 GLAVLERIRAGFEHQPNVIMLTAFGQE 89 (130)
T ss_dssp HHHHHHHHHHHCSSCCEEEEEEETTCH
T ss_pred HHHHHHHHHhcCCCCCcEEEEecCCCH
Confidence 34677777652 3456677766544
No 354
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=23.31 E-value=1.7e+02 Score=22.58 Aligned_cols=92 Identities=12% Similarity=0.077 Sum_probs=49.8
Q ss_pred hhHHHHHHHHHHCCCCEEEEeCCchh--hHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCCC
Q psy6288 28 IGALRLINHLHKHNIPFAIATSSAKE--SFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPS 105 (166)
Q Consensus 28 ~g~~~~l~~l~~~g~~i~ivS~~~~~--~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 105 (166)
.+...+++.+++.++..+++...... .+...+. ..|+. +++.. . .....--++......++++| ++..
T Consensus 70 ~d~~~l~~~a~~~~id~vv~g~E~~l~~~~~~~l~-~~Gi~-----~~Gp~-~-~a~~~~~dK~~~k~~l~~~G--Ip~p 139 (442)
T 3lp8_A 70 NSTIEVIQVCKKEKIELVVIGPETPLMNGLSDALT-EEGIL-----VFGPS-K-AAARLESSKGFTKELCMRYG--IPTA 139 (442)
T ss_dssp TCHHHHHHHHHHTTCCEEEECSHHHHHTTHHHHHH-HTTCE-----EESCC-H-HHHHHHHCHHHHHHHHHHHT--CCBC
T ss_pred CCHHHHHHHHHHhCCCEEEECCcHHHHHHHHHHHH-hcCCc-----EecCC-H-HHHHHhhCHHHHHHHHHHCC--CCCC
Confidence 35566778888888888776432211 1212222 23431 12111 0 11111124667788999999 7776
Q ss_pred ceEEEecCHhHHHHHHHcCCeEEE
Q psy6288 106 KCLVFEDAPNGVLGAKAAGMSCVM 129 (166)
Q Consensus 106 ~~i~IGD~~~Di~~a~~~G~~~i~ 129 (166)
+...+.|...-...+.+.|++.+.
T Consensus 140 ~~~~~~~~~ea~~~~~~~g~PvVv 163 (442)
T 3lp8_A 140 KYGYFVDTNSAYKFIDKHKLPLVV 163 (442)
T ss_dssp CEEEESSHHHHHHHHHHSCSSEEE
T ss_pred CEEEECCHHHHHHHHHHcCCcEEE
Confidence 776665543444566778887553
No 355
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=23.26 E-value=67 Score=20.24 Aligned_cols=29 Identities=10% Similarity=-0.066 Sum_probs=19.2
Q ss_pred ccchhHHHHHHHHHHCCCCEEEEeCCchh
Q psy6288 25 NLAIGALRLINHLHKHNIPFAIATSSAKE 53 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~i~ivS~~~~~ 53 (166)
.+-+.+.+.++++.+.|.+.++++.+...
T Consensus 66 ~p~~~v~~~v~e~~~~g~k~v~~~~G~~~ 94 (122)
T 3ff4_A 66 INPQNQLSEYNYILSLKPKRVIFNPGTEN 94 (122)
T ss_dssp SCHHHHGGGHHHHHHHCCSEEEECTTCCC
T ss_pred eCHHHHHHHHHHHHhcCCCEEEECCCCCh
Confidence 34455566777777778887777766533
No 356
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=23.26 E-value=1.3e+02 Score=18.76 Aligned_cols=20 Identities=5% Similarity=0.169 Sum_probs=9.2
Q ss_pred HHHHHHHHHCCCCEEEEeCC
Q psy6288 31 LRLINHLHKHNIPFAIATSS 50 (166)
Q Consensus 31 ~~~l~~l~~~g~~i~ivS~~ 50 (166)
+++++..++.|+.++++-|+
T Consensus 93 kdfieeakergvevfvvynn 112 (162)
T 2l82_A 93 KDFIEEAKERGVEVFVVYNN 112 (162)
T ss_dssp HHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHhcCcEEEEEecC
Confidence 34444444444444444443
No 357
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=23.22 E-value=1e+02 Score=18.52 Aligned_cols=22 Identities=14% Similarity=0.385 Sum_probs=12.3
Q ss_pred HHHHHHHHHC--CCCEEEEeCCch
Q psy6288 31 LRLINHLHKH--NIPFAIATSSAK 52 (166)
Q Consensus 31 ~~~l~~l~~~--g~~i~ivS~~~~ 52 (166)
.++++.+++. ..+++++|+...
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~~ 86 (136)
T 1mvo_A 63 IEVCKQLRQQKLMFPILMLTAKDE 86 (136)
T ss_dssp HHHHHHHHHTTCCCCEEEEECTTC
T ss_pred HHHHHHHHcCCCCCCEEEEECCCC
Confidence 4566666553 445666665543
No 358
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=23.18 E-value=99 Score=19.22 Aligned_cols=38 Identities=11% Similarity=0.292 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHC--CCCEEEEeCCchhhHHHHHhhhcCccc
Q psy6288 29 GALRLINHLHKH--NIPFAIATSSAKESFELKTSRHKDTLK 67 (166)
Q Consensus 29 g~~~~l~~l~~~--g~~i~ivS~~~~~~~~~~l~~~~gl~~ 67 (166)
...++++.+++. +.+++++|+...........+ .|...
T Consensus 61 ~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~-~g~~~ 100 (155)
T 1qkk_A 61 DGLALFRKILALDPDLPMILVTGHGDIPMAVQAIQ-DGAYD 100 (155)
T ss_dssp CHHHHHHHHHHHCTTSCEEEEECGGGHHHHHHHHH-TTCCE
T ss_pred CHHHHHHHHHhhCCCCCEEEEECCCChHHHHHHHh-cCCCe
Confidence 345677777653 577888887765433333333 25433
No 359
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=23.17 E-value=1.4e+02 Score=19.91 Aligned_cols=41 Identities=12% Similarity=0.038 Sum_probs=29.3
Q ss_pred ccchhHHHHHHHHHHCCCC-EEEEeCCchhhHHHHHhhhcCcc
Q psy6288 25 NLAIGALRLINHLHKHNIP-FAIATSSAKESFELKTSRHKDTL 66 (166)
Q Consensus 25 ~~~~g~~~~l~~l~~~g~~-i~ivS~~~~~~~~~~l~~~~gl~ 66 (166)
.-.++..+.+.++++.|+. ++.+|.++....... .+..++.
T Consensus 60 ~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~w-~~~~~~~ 101 (171)
T 2xhf_A 60 NHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAAW-GKTVDPE 101 (171)
T ss_dssp SSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHH-HHHHCTT
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHH-HHhcCCC
Confidence 3466778888999999997 889999886655333 3444653
No 360
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=22.97 E-value=2.1e+02 Score=21.09 Aligned_cols=75 Identities=9% Similarity=-0.090 Sum_probs=41.2
Q ss_pred hhHHHHHHHHHHCCCC-EEEEeCCchhh----HHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCC
Q psy6288 28 IGALRLINHLHKHNIP-FAIATSSAKES----FELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKP 102 (166)
Q Consensus 28 ~g~~~~l~~l~~~g~~-i~ivS~~~~~~----~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 102 (166)
+++.++++.+.+.+.. ++++++++... +...+.+.-++.. ..+++.. ... ...+...+.++++ +
T Consensus 103 ~~~~~i~~~i~~~~p~~~viv~SNPv~~~~~~~t~~~~~~~~~p~--~rviG~~---~Ld----~~r~~~~la~~l~--v 171 (326)
T 1smk_A 103 GIVKTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGTYDP--KRLLGVT---MLD----VVRANTFVAEVLG--L 171 (326)
T ss_dssp HHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHHHHHTCCCT--TSEEECC---HHH----HHHHHHHHHHHHT--C
T ss_pred HHHHHHHHHHHhhCCCeEEEEECCchHHHHHHHHHHHHHccCCCc--ccEEEEe---ehH----HHHHHHHHHHHhC--c
Confidence 5677788888776543 55555566554 3233333334432 2455544 111 1234456677888 7
Q ss_pred CCCc--eEEEecC
Q psy6288 103 QPSK--CLVFEDA 113 (166)
Q Consensus 103 ~~~~--~i~IGD~ 113 (166)
++++ +.++|..
T Consensus 172 ~~~~v~~~v~G~H 184 (326)
T 1smk_A 172 DPRDVDVPVVGGH 184 (326)
T ss_dssp CGGGCBCCEEECS
T ss_pred ChhheEEEEeccc
Confidence 7766 5778864
No 361
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=22.83 E-value=94 Score=19.25 Aligned_cols=20 Identities=10% Similarity=0.157 Sum_probs=7.4
Q ss_pred HHHHHHHHC--CCCEEEEeCCc
Q psy6288 32 RLINHLHKH--NIPFAIATSSA 51 (166)
Q Consensus 32 ~~l~~l~~~--g~~i~ivS~~~ 51 (166)
++++.+++. +.+++++|+..
T Consensus 67 ~~~~~l~~~~~~~~ii~ls~~~ 88 (154)
T 2qsj_A 67 DGLVRLKRFDPSNAVALISGET 88 (154)
T ss_dssp HHHHHHHHHCTTSEEEEC----
T ss_pred HHHHHHHHhCCCCeEEEEeCCC
Confidence 444444432 34555555443
No 362
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=22.82 E-value=89 Score=19.43 Aligned_cols=24 Identities=13% Similarity=0.224 Sum_probs=12.8
Q ss_pred HHHHHHHHHHC--CCCEEEEeCCchh
Q psy6288 30 ALRLINHLHKH--NIPFAIATSSAKE 53 (166)
Q Consensus 30 ~~~~l~~l~~~--g~~i~ivS~~~~~ 53 (166)
-.++++.+++. ..+++++|+....
T Consensus 73 g~~~~~~l~~~~~~~~ii~~s~~~~~ 98 (153)
T 3hv2_A 73 GPTLLARIHQQYPSTTRILLTGDPDL 98 (153)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCCCCH
T ss_pred HHHHHHHHHhHCCCCeEEEEECCCCH
Confidence 34555555542 4556666665443
No 363
>1j5w_A Glycyl-tRNA synthetase alpha chain; structural genomics, TM0216, JCSG, PSI, protein structure initiative; 1.95A {Thermotoga maritima} SCOP: d.104.1.1
Probab=22.65 E-value=17 Score=26.72 Aligned_cols=39 Identities=18% Similarity=0.216 Sum_probs=30.3
Q ss_pred hHHHHHHHHHcCCCCCCCceEEEecCH-hHHHHHHHcCCe
Q psy6288 88 PDVFLVAAKRFDEKPQPSKCLVFEDAP-NGVLGAKAAGMS 126 (166)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~i~IGD~~-~Di~~a~~~G~~ 126 (166)
.+.|..-++.+|++.....+-||.|.. +-..+|.-.|+.
T Consensus 101 QeLYL~SL~alGid~~~HDIRFVEDnWEsPTLGAwGLGWE 140 (298)
T 1j5w_A 101 QELYLESLEYLGINLKEHDIRFVEDNWESPTLGAWGVGWE 140 (298)
T ss_dssp HHHHHHHHHHTTCCTTTSCEEEEEECCEEGGGTEEEEEEE
T ss_pred HHHHHHHHHHhCCCcccCCceeeccCCCCCccccccccce
Confidence 478999999999444456799999998 777777766654
No 364
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=22.50 E-value=1.4e+02 Score=18.27 Aligned_cols=24 Identities=13% Similarity=0.360 Sum_probs=12.1
Q ss_pred HHHHHHHHHH------CCCCEEEEeCCchh
Q psy6288 30 ALRLINHLHK------HNIPFAIATSSAKE 53 (166)
Q Consensus 30 ~~~~l~~l~~------~g~~i~ivS~~~~~ 53 (166)
-.++++.+++ ...+++++|+....
T Consensus 73 g~~~~~~lr~~~~~~~~~~pii~~s~~~~~ 102 (143)
T 3m6m_D 73 GLDMLKQLRVMQASGMRYTPVVVLSADVTP 102 (143)
T ss_dssp HHHHHHHHHHHHHTTCCCCCEEEEESCCCH
T ss_pred HHHHHHHHHhchhccCCCCeEEEEeCCCCH
Confidence 3455555542 12456666665443
No 365
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=22.34 E-value=76 Score=23.94 Aligned_cols=30 Identities=7% Similarity=-0.056 Sum_probs=24.7
Q ss_pred cchhHHHHHHHHHHCC-CCEEEEeCCchhhH
Q psy6288 26 LAIGALRLINHLHKHN-IPFAIATSSAKESF 55 (166)
Q Consensus 26 ~~~g~~~~l~~l~~~g-~~i~ivS~~~~~~~ 55 (166)
--+.+.++++.+++.| .+++.+||.....+
T Consensus 111 ~T~e~l~a~~~ak~~G~a~viaIT~~~~S~L 141 (368)
T 1moq_A 111 ETADTLAGLRLSKELGYLGSLAICNVPGSSL 141 (368)
T ss_dssp CCHHHHHHHHHHTTTTCSEEEEEESSTTCHH
T ss_pred CCHHHHHHHHHHHHcCCCeEEEEECCCCChH
Confidence 3578888999999999 99999999875544
No 366
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=22.23 E-value=78 Score=22.49 Aligned_cols=24 Identities=4% Similarity=-0.036 Sum_probs=18.4
Q ss_pred chhHHHHHHHHHHCCCCEEEEeCC
Q psy6288 27 AIGALRLINHLHKHNIPFAIATSS 50 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~i~ivS~~ 50 (166)
...+.+-|..+++.|++++||+++
T Consensus 34 i~~la~~i~~l~~~G~~vviV~gG 57 (243)
T 3ek6_A 34 INRLAHEVIEAQQAGAQVALVIGG 57 (243)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHHCCCeEEEEECC
Confidence 344456777888899999999974
No 367
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=21.98 E-value=1e+02 Score=17.79 Aligned_cols=38 Identities=11% Similarity=0.199 Sum_probs=26.1
Q ss_pred cCCccchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHH
Q psy6288 22 LGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKT 59 (166)
Q Consensus 22 ~~~~~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l 59 (166)
....+.-|..+.++.+++...+++|+.++-.+.....+
T Consensus 8 kagk~~~G~~~v~kai~~gkaklViiA~D~~~~~~~~i 45 (82)
T 3v7e_A 8 QAKSIIIGTKQTVKALKRGSVKEVVVAKDADPILTSSV 45 (82)
T ss_dssp HCSEEEESHHHHHHHHTTTCEEEEEEETTSCHHHHHHH
T ss_pred HcCCeeEcHHHHHHHHHcCCeeEEEEeCCCCHHHHHHH
Confidence 34566778888888888776777777777655444444
No 368
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A*
Probab=21.84 E-value=82 Score=22.29 Aligned_cols=23 Identities=17% Similarity=0.180 Sum_probs=18.7
Q ss_pred hhHHHHHHHHHHCCCCEEEEeCC
Q psy6288 28 IGALRLINHLHKHNIPFAIATSS 50 (166)
Q Consensus 28 ~g~~~~l~~l~~~g~~i~ivS~~ 50 (166)
..+.+-|..+++.|++++||+++
T Consensus 33 ~~~a~~I~~l~~~G~~vvlV~gG 55 (240)
T 4a7w_A 33 DHIAKEIKSLVENDIEVGIVIGG 55 (240)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHCCCcEEEEECC
Confidence 34556778888899999999988
No 369
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=21.42 E-value=1.8e+02 Score=19.04 Aligned_cols=91 Identities=7% Similarity=0.051 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHCCCCEEEEeC-CchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCCCce
Q psy6288 29 GALRLINHLHKHNIPFAIATS-SAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKC 107 (166)
Q Consensus 29 g~~~~l~~l~~~g~~i~ivS~-~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 107 (166)
|..-+-..|+..|+.+..+.. -+.+.+...+.+ .-.|.|..|. ......+...-+...+++.+ . ++-.
T Consensus 34 G~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~-----~~~diV~lS~---~~~~~~~~~~~~i~~L~~~g--~-~~i~ 102 (161)
T 2yxb_A 34 GAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQ-----EDVDVIGVSI---LNGAHLHLMKRLMAKLRELG--A-DDIP 102 (161)
T ss_dssp HHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHH-----TTCSEEEEEE---SSSCHHHHHHHHHHHHHHTT--C-TTSC
T ss_pred HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHh-----cCCCEEEEEe---echhhHHHHHHHHHHHHhcC--C-CCCE
Confidence 444445556788998887653 343433333322 2245554443 22221222222333444444 3 2345
Q ss_pred EEEecCH--hHHHHHHHcCCeEEEe
Q psy6288 108 LVFEDAP--NGVLGAKAAGMSCVMV 130 (166)
Q Consensus 108 i~IGD~~--~Di~~a~~~G~~~i~v 130 (166)
++||-.. .|...+++.|+..++.
T Consensus 103 v~vGG~~~~~~~~~l~~~G~d~v~~ 127 (161)
T 2yxb_A 103 VVLGGTIPIPDLEPLRSLGIREIFL 127 (161)
T ss_dssp EEEEECCCHHHHHHHHHTTCCEEEC
T ss_pred EEEeCCCchhcHHHHHHCCCcEEEC
Confidence 7777655 4666788999986553
No 370
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=21.36 E-value=1.5e+02 Score=21.13 Aligned_cols=51 Identities=6% Similarity=0.033 Sum_probs=34.1
Q ss_pred HHHHHHHHCCC--CEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcC
Q psy6288 32 RLINHLHKHNI--PFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFD 99 (166)
Q Consensus 32 ~~l~~l~~~g~--~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~ 99 (166)
++++.+++.|+ ++.+-|-+....+. .+.+ +|+ |.|++-. |..+..++++.+
T Consensus 213 ~~v~~~~~~Glg~~V~~WTvn~~~~~~-~l~~-~GV----DgIiTD~-----------P~~~~~~l~~~~ 265 (285)
T 1xx1_A 213 AIKSRDSANGFINKIYYWSVDKVSTTK-AALD-VGV----DGIMTNY-----------PNVLIGVLKESG 265 (285)
T ss_dssp HHHHHTSTTCCCCEEEEECCCSHHHHH-HHHH-HTC----SEEEESC-----------HHHHHHHHHSTT
T ss_pred HHHHHHHhcCCCCeEEEeeCCCHHHHH-HHHh-cCC----CEEEeCC-----------HHHHHHHHhhhc
Confidence 45666777888 99999988876663 3334 354 6666544 666777776655
No 371
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=21.32 E-value=2.7e+02 Score=21.13 Aligned_cols=98 Identities=13% Similarity=0.105 Sum_probs=50.4
Q ss_pred hhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccce-EEecCCCCCccCCCCChHHHHHHHH---HcCCCC-
Q psy6288 28 IGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHH-VVLGSADPEVKQGKPAPDVFLVAAK---RFDEKP- 102 (166)
Q Consensus 28 ~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~-v~~~~~~~~~~~~Kp~~~~~~~~~~---~~~~~~- 102 (166)
+|+.+-+..+-+.+-++.|+|+.........+.+.+.-.. ++. ++..+ ... .-|..+....+.+ +.+ .
T Consensus 30 ~g~l~~l~~~l~~~~rvlIVtd~~v~~~~~~v~~~L~~~g-~~~~~~~~~---~gE-~~kt~~~v~~~~~~l~~~~--~~ 102 (368)
T 3qbe_A 30 TGLLDELEDLLADRHKVAVVHQPGLAETAEEIRKRLAGKG-VDAHRIEIP---DAE-AGKDLPVVGFIWEVLGRIG--IG 102 (368)
T ss_dssp SCCHHHHHHHHTTCSEEEEEECGGGHHHHHHHHHHHHHTT-CEEEEEECC---SGG-GGGBHHHHHHHHHHHHHHT--CC
T ss_pred CCHHHHHHHHHHcCCEEEEEECccHHHHHHHHHHHHHhcC-CcceEEEeC---CCC-CCCCHHHHHHHHHHHHHcC--CC
Confidence 4444444333333478999998864433333333221111 111 11111 111 2334455555444 444 3
Q ss_pred CCCceEEEecCH-hHHHHHHH----cCCeEEEecC
Q psy6288 103 QPSKCLVFEDAP-NGVLGAKA----AGMSCVMVPD 132 (166)
Q Consensus 103 ~~~~~i~IGD~~-~Di~~a~~----~G~~~i~v~~ 132 (166)
..+-++-||-+. .|+..+-. .|++.+.|.+
T Consensus 103 r~d~IIavGGGsv~D~ak~~Aa~~~rgip~i~IPT 137 (368)
T 3qbe_A 103 RKDALVSLGGGAATDVAGFAAATWLRGVSIVHLPT 137 (368)
T ss_dssp TTCEEEEEESHHHHHHHHHHHHHGGGCCEEEEEEC
T ss_pred CCcEEEEECChHHHHHHHHHHHHhccCCcEEEECC
Confidence 346678899976 88876665 5888887765
No 372
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=21.32 E-value=1.3e+02 Score=17.48 Aligned_cols=22 Identities=18% Similarity=0.308 Sum_probs=11.6
Q ss_pred HHHHHHHHH-CCCCEEEEeCCch
Q psy6288 31 LRLINHLHK-HNIPFAIATSSAK 52 (166)
Q Consensus 31 ~~~l~~l~~-~g~~i~ivS~~~~ 52 (166)
.++++.+++ .+.+++++|+...
T Consensus 62 ~~~~~~l~~~~~~~ii~~s~~~~ 84 (122)
T 1zgz_A 62 LMLTRALRERSTVGIILVTGRSD 84 (122)
T ss_dssp HHHHHHHHTTCCCEEEEEESSCC
T ss_pred HHHHHHHHhcCCCCEEEEECCCC
Confidence 355566654 2345666665543
No 373
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=21.27 E-value=64 Score=21.52 Aligned_cols=25 Identities=20% Similarity=0.171 Sum_probs=21.5
Q ss_pred chhHHHHHHHHHHCCCCEEEEeCCc
Q psy6288 27 AIGALRLINHLHKHNIPFAIATSSA 51 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~i~ivS~~~ 51 (166)
.|.+.++++.+++.|++++..+...
T Consensus 101 v~~l~eli~~a~~~Gvk~~aC~~~~ 125 (160)
T 3pnx_A 101 APKLSDLLSGARKKEVKFYACQLSV 125 (160)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEHHHH
T ss_pred CCCHHHHHHHHHHCCCEEEEehhhH
Confidence 4667899999999999999998765
No 374
>3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A*
Probab=21.23 E-value=2.9e+02 Score=21.83 Aligned_cols=82 Identities=11% Similarity=0.065 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCCCce
Q psy6288 28 IGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKC 107 (166)
Q Consensus 28 ~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 107 (166)
+.+..-|..|++.|.+++||-++- +.+...+.+ +|+..-|.. +- -............++.+.+
T Consensus 75 ~~~a~dI~~l~~~G~~~VvVHGgG-~~i~~~l~~-~gi~~~f~~---G~----RvTd~~~l~vv~~~lg~vn-------- 137 (460)
T 3s6g_A 75 PGLASALAFLQTVGLTPVVVHGGG-PQLDAALEA-ADIPTERVD---GL----RVTRDEAMPIIRDTLTQAN-------- 137 (460)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCH-HHHHHHHHH-HSCCCCCCS---SS----CCBCTTTHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHCCCcEEEEECCC-hHHHHHHHH-cCCCccccC---Cc----cCCCHHHHHHHHHHHHHHH--------
Confidence 566667777788888887777764 444444444 577654411 10 0011222333444333332
Q ss_pred EEEecCHhHH-HHHHHcCCeEEEecCC
Q psy6288 108 LVFEDAPNGV-LGAKAAGMSCVMVPDP 133 (166)
Q Consensus 108 i~IGD~~~Di-~~a~~~G~~~i~v~~~ 133 (166)
..+ .+..+.|++++.++.+
T Consensus 138 -------~~lv~aL~~~G~~Av~lsg~ 157 (460)
T 3s6g_A 138 -------LALVDAIRDAGGRAAAVPRG 157 (460)
T ss_dssp -------HHHHHHHHHTTCCEEEECSS
T ss_pred -------HHHHHHHHhCCCCceEEecC
Confidence 334 5666778888887754
No 375
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=21.19 E-value=2.6e+02 Score=20.86 Aligned_cols=82 Identities=16% Similarity=0.176 Sum_probs=45.7
Q ss_pred CCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHH---HHHcCCCCCC-CceEEEecCH-h
Q psy6288 41 NIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVA---AKRFDEKPQP-SKCLVFEDAP-N 115 (166)
Q Consensus 41 g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~---~~~~~~~~~~-~~~i~IGD~~-~ 115 (166)
+-++.|+|+.........+.+.+. .. .+.++... . ..|..+....+ +.+.+ .+. +-++-||-+. -
T Consensus 28 ~~kvliVtd~~v~~~~~~v~~~L~-~~-~~~~~~~g-----e-~~~~~~~v~~~~~~~~~~~--~~r~d~IIavGGGsv~ 97 (348)
T 1ujn_A 28 AGPAALLFDRRVEGFAQEVAKALG-VR-HLLGLPGG-----E-AAKSLEVYGKVLSWLAEKG--LPRNATLLVVGGGTLT 97 (348)
T ss_dssp SSCEEEEEEGGGHHHHHHHHHHHT-CC-CEEEECCS-----G-GGSSHHHHHHHHHHHHHHT--CCTTCEEEEEESHHHH
T ss_pred CCEEEEEECCcHHHHHHHHHHHhc-cC-eEEEECCC-----C-CCCCHHHHHHHHHHHHHcC--CCCCCEEEEECCcHHH
Confidence 568999997643223344444333 12 12222222 1 23445555555 44555 443 5566698855 8
Q ss_pred HHHHHHHc----CCeEEEecC
Q psy6288 116 GVLGAKAA----GMSCVMVPD 132 (166)
Q Consensus 116 Di~~a~~~----G~~~i~v~~ 132 (166)
|+..+-.+ |++.+.|.+
T Consensus 98 D~ak~~A~~~~rgip~i~IPT 118 (348)
T 1ujn_A 98 DLGGFVAATYLRGVAYLAFPT 118 (348)
T ss_dssp HHHHHHHHHBTTCCEEEEEEC
T ss_pred HHHHHHHHHhccCCCEEEecC
Confidence 88777663 788887765
No 376
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=21.01 E-value=2e+02 Score=21.02 Aligned_cols=75 Identities=7% Similarity=-0.043 Sum_probs=37.9
Q ss_pred hhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCCh-HHHHHHHHHcCCCCCCCc
Q psy6288 28 IGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAP-DVFLVAAKRFDEKPQPSK 106 (166)
Q Consensus 28 ~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~-~~~~~~~~~~~~~~~~~~ 106 (166)
+++.++++.+++.+-.++++++++.......+.+..|+.. ..+++.. +.-++ .+-..+.++++ +++++
T Consensus 101 ~i~~~i~~~i~~~~~~~vlv~SNPv~~~t~~~~k~~~~p~--~rviG~g-------t~LD~~r~~~~la~~lg--v~~~~ 169 (313)
T 1hye_A 101 KIVGKYAKKIAEICDTKIFVITNPVDVMTYKALVDSKFER--NQVFGLG-------THLDSLRFKVAIAKFFG--VHIDE 169 (313)
T ss_dssp HHHHHHHHHHHHHCCCEEEECSSSHHHHHHHHHHHHCCCT--TSEEECT-------THHHHHHHHHHHHHHHT--CCGGG
T ss_pred HHHHHHHHHHHHhCCeEEEEecCcHHHHHHHHHHhhCcCh--hcEEEeC-------ccHHHHHHHHHHHHHhC--cCHHH
Confidence 4455677777666533556666665555444444323321 2455541 11112 33445567788 76665
Q ss_pred --eEEEecC
Q psy6288 107 --CLVFEDA 113 (166)
Q Consensus 107 --~i~IGD~ 113 (166)
..++|..
T Consensus 170 v~~~v~G~H 178 (313)
T 1hye_A 170 VRTRIIGEH 178 (313)
T ss_dssp EECCEEECS
T ss_pred eEEEEeecc
Confidence 3556643
No 377
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=20.86 E-value=2.2e+02 Score=19.90 Aligned_cols=25 Identities=16% Similarity=0.183 Sum_probs=19.4
Q ss_pred chhHHHHHHHHHHCCC-CEEEEeCCc
Q psy6288 27 AIGALRLINHLHKHNI-PFAIATSSA 51 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~-~i~ivS~~~ 51 (166)
+.+...+.+.|.+.|. +++++++..
T Consensus 111 ~~~~~~a~~~L~~~G~~~I~~i~~~~ 136 (289)
T 3k9c_A 111 VAGITLAVDHLTELGHRNIAHIDGAD 136 (289)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEECCTT
T ss_pred HHHHHHHHHHHHHCCCCcEEEEeCCC
Confidence 4577788899988877 588888764
No 378
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=20.83 E-value=1.3e+02 Score=20.73 Aligned_cols=33 Identities=6% Similarity=-0.066 Sum_probs=25.0
Q ss_pred HHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCc
Q psy6288 31 LRLINHLHKHNIPFAIATSSAKESFELKTSRHKDT 65 (166)
Q Consensus 31 ~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl 65 (166)
.++++.+++.|+++.+-|-+....+. .+.+ +|.
T Consensus 176 ~~~v~~~~~~G~~v~~wtvn~~~~~~-~l~~-~Gv 208 (224)
T 1vd6_A 176 EEAVAGWRKRGLFVVAWTVNEEGEAR-RLLA-LGL 208 (224)
T ss_dssp HHHHHHHHHTTCEEEEECCCCHHHHH-HHHH-TTC
T ss_pred HHHHHHHHHCCCEEEEEeCCCHHHHH-HHHh-cCC
Confidence 57899999999999999988766553 4434 364
No 379
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=20.79 E-value=2.2e+02 Score=19.83 Aligned_cols=25 Identities=20% Similarity=0.124 Sum_probs=19.1
Q ss_pred chhHHHHHHHHHHCCC-CEEEEeCCc
Q psy6288 27 AIGALRLINHLHKHNI-PFAIATSSA 51 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~-~i~ivS~~~ 51 (166)
+.+...+.+.|.+.|. +++++++..
T Consensus 110 ~~~g~~a~~~L~~~G~~~i~~i~~~~ 135 (291)
T 3egc_A 110 VRGARTAVEYLIARGHTRIGAIVGSA 135 (291)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEECSCT
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCCC
Confidence 4667778888888776 688888764
No 380
>2j07_A Deoxyribodipyrimidine photo-lyase; flavoprotein, nucleotide-binding, DNA repair; HET: FAD HDF; 1.95A {Thermus thermophilus} SCOP: a.99.1.1 c.28.1.1 PDB: 1iqu_A* 1iqr_A* 2j08_A* 2j09_A*
Probab=20.60 E-value=1.2e+02 Score=23.51 Aligned_cols=39 Identities=8% Similarity=-0.042 Sum_probs=26.4
Q ss_pred cchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCc
Q psy6288 26 LAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDT 65 (166)
Q Consensus 26 ~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl 65 (166)
++.++.++=+.|++.|.++.+..+...+.+...+ +..+.
T Consensus 50 l~~sL~~l~~~L~~~g~~l~~~~g~~~~~l~~l~-~~~~~ 88 (420)
T 2j07_A 50 FLENVRALREAYRARGGALWVLEGLPWEKVPEAA-RRLKA 88 (420)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-HHTTC
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-HHcCC
Confidence 4566777777788889999988887766554443 33344
No 381
>3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A*
Probab=20.57 E-value=2.6e+02 Score=20.64 Aligned_cols=83 Identities=6% Similarity=-0.041 Sum_probs=47.3
Q ss_pred chhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHHcCCCCCCCc
Q psy6288 27 AIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSK 106 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 106 (166)
.+.+.+-|..|++.|.+++||-++. +.+...+ +.+|+..-|. .+.+-.+++.++.+...++
T Consensus 64 ~~~~~~dI~~l~~~G~~~VvVHGgG-~~i~~~l-~~~gi~~~~~----------~G~RvTd~~~l~vv~m~~~------- 124 (307)
T 3zzh_A 64 LHELASCLAFLYHVGLYPIVLHGTG-PQVNGRL-EAQGIEPDYI----------DGIRITDEHTMAVVRKCFL------- 124 (307)
T ss_dssp HHHHHHHHHHHHHBTCCEEEEECCH-HHHHHHH-HHTTCCCCEE----------TTEECBCHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCC-HHHHHHH-HHcCCCcccc----------CCeecCCHHHHHHHHHHHH-------
Confidence 3566667777888899988888875 4454444 4458765441 1223334444443322222
Q ss_pred eEEEecCHhHH-HHHHHcCCeEEEecCC
Q psy6288 107 CLVFEDAPNGV-LGAKAAGMSCVMVPDP 133 (166)
Q Consensus 107 ~i~IGD~~~Di-~~a~~~G~~~i~v~~~ 133 (166)
--..++ .+..+.|++++.++.+
T Consensus 125 -----~vn~~lv~~L~~~G~~Av~l~gg 147 (307)
T 3zzh_A 125 -----EQNLKLVTALEQLGVRARPITSG 147 (307)
T ss_dssp -----HHHHHHHHHHHHTTCCEEEECSS
T ss_pred -----HHHHHHHHHHHhCCCCeeEEcCC
Confidence 001334 6667778888888653
No 382
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=20.55 E-value=1.7e+02 Score=21.67 Aligned_cols=39 Identities=8% Similarity=-0.066 Sum_probs=25.9
Q ss_pred hhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccc
Q psy6288 28 IGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKL 68 (166)
Q Consensus 28 ~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~ 68 (166)
..+.+-|..|++.|++++||+++- ..+...+ +.+|+..-
T Consensus 68 ~~l~~~i~~l~~~G~~vVlVhGgG-~~i~~~~-~~~g~~~~ 106 (321)
T 2v5h_A 68 EAVMRDIVFLACVGMRPVVVHGGG-PEINAWL-GRVGIEPQ 106 (321)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCH-HHHHHHH-HHTTCCCC
T ss_pred HHHHHHHHHHHHCCCEEEEEECCH-HHHHHHH-HHcCCCcc
Confidence 455666777888999999999984 3343333 33566543
No 383
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=20.46 E-value=1.9e+02 Score=20.81 Aligned_cols=40 Identities=13% Similarity=0.048 Sum_probs=27.8
Q ss_pred HHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecC
Q psy6288 31 LRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGS 76 (166)
Q Consensus 31 ~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~ 76 (166)
.++++.+++.|+++.+-|-+....+. .+.+ +|+ |.|++-.
T Consensus 231 ~~~v~~~~~~G~~v~~wTvn~~~~~~-~l~~-~GV----dgIiTD~ 270 (287)
T 2oog_A 231 EQNTHHLKDLGFIVHPYTVNEKADML-RLNK-YGV----DGVFTNF 270 (287)
T ss_dssp HHHHHHHHHTTCEECCBCCCSHHHHH-HHHH-HTC----SEEEESC
T ss_pred HHHHHHHHHCCCeEEEEeCCCHHHHH-HHHH-cCC----CEEEeCC
Confidence 46889999999999999987766553 3334 354 5555543
No 384
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=20.37 E-value=2.4e+02 Score=20.08 Aligned_cols=70 Identities=14% Similarity=0.246 Sum_probs=37.7
Q ss_pred cchhHHHHHHHHHHCCCCEEEEeCCchhhHHHHHhhhcCcccccceEEecCCCCCccCCCCC--hHHHHHHHHHcCCCCC
Q psy6288 26 LAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPA--PDVFLVAAKRFDEKPQ 103 (166)
Q Consensus 26 ~~~g~~~~l~~l~~~g~~i~ivS~~~~~~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~--~~~~~~~~~~~~~~~~ 103 (166)
-...+.++++.+++..+++++.+++. +. +...+|.++--. -.+...|. .......++++|..++
T Consensus 49 t~~~~~~~v~~ik~~~~Piil~p~~~-~~----------~~~gaD~il~ps---lln~~~~~~i~g~~~~a~~~~gl~~~ 114 (235)
T 3w01_A 49 TEDNVIHLMSKIRRYPLPLVLEISNI-ES----------VMPGFDFYFVPT---VLNSTDVAFHNGTLLEALKTYGHSID 114 (235)
T ss_dssp CHHHHHHHHHHHTTSCSCEEEECCCS-TT----------CCTTCSEEEEEE---ETTBSSGGGTTHHHHHHHHHHGGGCC
T ss_pred CHHHHHHHHHHhcCcCCCEEEecCCH-HH----------hhcCCCEEEEcc---ccCCCCcchhhhHHHHHHHHcCCCCc
Confidence 35667777788877777787777764 21 122344443332 11111221 1223455788884357
Q ss_pred CCceEE
Q psy6288 104 PSKCLV 109 (166)
Q Consensus 104 ~~~~i~ 109 (166)
.++++.
T Consensus 115 ~~e~i~ 120 (235)
T 3w01_A 115 FEEVIF 120 (235)
T ss_dssp GGGEEE
T ss_pred ccceee
Confidence 777777
No 385
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=20.23 E-value=2.4e+02 Score=19.93 Aligned_cols=25 Identities=20% Similarity=0.133 Sum_probs=18.6
Q ss_pred chhHHHHHHHHHHCCC-CEEEEeCCc
Q psy6288 27 AIGALRLINHLHKHNI-PFAIATSSA 51 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~-~i~ivS~~~ 51 (166)
+.+...+.+.|.+.|. +++++++..
T Consensus 116 ~~~g~~a~~~L~~~G~~~I~~i~~~~ 141 (303)
T 3kke_A 116 QKGGGIATEHLITLGHSRIAFISGTA 141 (303)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEESCS
T ss_pred HHHHHHHHHHHHHCCCCeEEEEeCCC
Confidence 4567778888888776 588888654
No 386
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=20.18 E-value=84 Score=21.96 Aligned_cols=24 Identities=13% Similarity=0.203 Sum_probs=18.8
Q ss_pred chhHHHHHHHHHHCCCCEEEEeCC
Q psy6288 27 AIGALRLINHLHKHNIPFAIATSS 50 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~i~ivS~~ 50 (166)
...+.+-|..|++.|++++||+++
T Consensus 32 ~~~~~~~i~~l~~~g~~vviV~Gg 55 (239)
T 1ybd_A 32 IVQTVGEIAEVVKMGVQVGIVVGG 55 (239)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCeEEEEECC
Confidence 345666777788889999999976
No 387
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=20.02 E-value=2.6e+02 Score=20.32 Aligned_cols=57 Identities=14% Similarity=0.109 Sum_probs=38.6
Q ss_pred chhHHHHHHHHHHCCCCEEEEeCCchh---------hHHHHHhhhcCcccccceEEecCCCCCccCCCCChHHHHHHHHH
Q psy6288 27 AIGALRLINHLHKHNIPFAIATSSAKE---------SFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKR 97 (166)
Q Consensus 27 ~~g~~~~l~~l~~~g~~i~ivS~~~~~---------~~~~~l~~~~gl~~~fd~v~~~~~~~~~~~~Kp~~~~~~~~~~~ 97 (166)
.+-..++++.+++.|+++.+-|-+... ..-..+.+ +|. |.|++-. |..+..+++.
T Consensus 214 ~~~~~~~V~~ah~~G~~V~vWTv~t~d~~~~~~~~~~~~~~L~~-~GV----DgIiTD~-----------P~~l~~~L~~ 277 (292)
T 3mz2_A 214 TPEVREVIDMLHERGVMCMISTAPSDDKLSTPESRAEAYRMIIR-QGV----DIIESDR-----------PIEVAEAISS 277 (292)
T ss_dssp CHHHHHHHHHHHHTTBCEEEECTTTGGGSSSHHHHHHHHHHHHH-TTC----CEEEESC-----------HHHHHHHHGG
T ss_pred cccCHHHHHHHHHCCCEEEEEeCCCcchhhhccccHHHHHHHHH-cCC----CEEEeCC-----------HHHHHHHHHH
Confidence 345578999999999999999865432 11133434 354 6666655 7788888877
Q ss_pred cC
Q psy6288 98 FD 99 (166)
Q Consensus 98 ~~ 99 (166)
+.
T Consensus 278 ~~ 279 (292)
T 3mz2_A 278 LI 279 (292)
T ss_dssp GS
T ss_pred hc
Confidence 65
Done!