RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6288
(166 letters)
>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546)
{Staphylococcus aureus [TaxId: 1280]}
Length = 380
Score = 64.8 bits (157), Expect = 2e-13
Identities = 25/156 (16%), Positives = 41/156 (26%), Gaps = 28/156 (17%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADP--------- 79
L+N L IAT + L F + +A
Sbjct: 219 EVKVLLNDLKGAGFELGIATGRPYTETV-VPFENLGLLPYFEADFIATASDVLEAENMYP 277
Query: 80 -EVKQGKPAPDVFLVAAKRFDEKP------------QPSKCLVFEDAPNGVLGAKAAGMS 126
GKP P ++ A + + D+ +L A+ G +
Sbjct: 278 QARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGAT 337
Query: 127 CVMV-----PDPTVPKHRTEAADLVLNSLEEFKPEL 157
+ + AD V+N L E + L
Sbjct: 338 FIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVL 373
Score = 25.9 bits (56), Expect = 3.0
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 10 VTHVIFDMDGLLLG 23
+ ++FD+DG+ L
Sbjct: 1 MKKILFDVDGVFLS 14
>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens)
[TaxId: 9606]}
Length = 253
Score = 60.2 bits (144), Expect = 3e-12
Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 7/126 (5%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAP 88
+ + + + I +S + E+ +L H + V K
Sbjct: 131 DVVPAVRKWREAGMKVYIYSSGSVEAQKLLF-GHSTEGDILELVDGHFDT--KIGHKVES 187
Query: 89 DVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDP--TVPKHRTEAADLV 146
+ + A + L D A+ A + +V P + +
Sbjct: 188 ESYRKIADSIGC--STNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSL 245
Query: 147 LNSLEE 152
+ S E
Sbjct: 246 ITSFSE 251
Score = 24.4 bits (51), Expect = 8.5
Identities = 4/13 (30%), Positives = 8/13 (61%)
Query: 10 VTHVIFDMDGLLL 22
VT ++ D++G
Sbjct: 7 VTVILLDIEGTTT 19
>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 164
Score = 57.1 bits (137), Expect = 1e-11
Identities = 24/174 (13%), Positives = 47/174 (27%), Gaps = 43/174 (24%)
Query: 13 VIFDMDGLLLG--------------------------YNLAIGALRLINHLHKHNIPFAI 46
+FD+D L L ++ L +P A
Sbjct: 8 AVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAA 67
Query: 47 ATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSK 106
A+ +++ + D K F + F + S+
Sbjct: 68 ASRTSEIQGANQLLELFDLGKYFIQREIYP--------GSKVTHFERLHHKTGVPF--SQ 117
Query: 107 CLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKPELYGL 160
+ F+D ++ G++C+ + D + + LE F GL
Sbjct: 118 MVFFDDENRNIIDVGRLGVTCIHIRDGM-------SLQTLTQGLETFAKAQAGL 164
>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 222
Score = 57.5 bits (137), Expect = 2e-11
Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 2/115 (1%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAP 88
L+ L K I T++ + + + S + +L H +V KP P
Sbjct: 101 PMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEP 160
Query: 89 DVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAA 143
++ KP ++ + +D + + A+ GM ++V + E
Sbjct: 161 QIYNFLLDTLKAKP--NEVVFLDDFGSNLKPARDMGMVTILVHNTASALRELEKV 213
Score = 24.7 bits (52), Expect = 5.5
Identities = 5/10 (50%), Positives = 7/10 (70%)
Query: 13 VIFDMDGLLL 22
FD+DG+L
Sbjct: 3 AAFDLDGVLA 12
>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId:
562]}
Length = 218
Score = 55.6 bits (132), Expect = 1e-10
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEA-ADLVLNSLEEFKPE 156
P C+ ED+ NG++ +KAA M ++VP P A++ L+SL E +
Sbjct: 160 DPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK 214
Score = 27.1 bits (58), Expect = 0.91
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 13 VIFDMDGLLL 22
IFDMDGLL+
Sbjct: 6 AIFDMDGLLI 15
>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia
coli [TaxId: 562]}
Length = 197
Score = 52.8 bits (125), Expect = 1e-09
Identities = 15/108 (13%), Positives = 41/108 (37%), Gaps = 5/108 (4%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAP 88
+ +++ L + + +++ + + + H+ L ++ KP
Sbjct: 88 EVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQ---DLGMRKPEA 144
Query: 89 DVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVP 136
++ + P S + F+D + + GA G++ ++V D T
Sbjct: 145 RIYQHVLQAEGFSP--SDTVFFDDNADNIEGANQLGITSILVKDKTTI 190
Score = 27.8 bits (60), Expect = 0.50
Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Query: 13 VIFDMDGLLL--GYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFH 70
IFD+ +++ +N +GA + + ++ + A E + +
Sbjct: 3 YIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALC 62
Query: 71 H 71
H
Sbjct: 63 H 63
>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter
autotrophicus [TaxId: 280]}
Length = 245
Score = 51.7 bits (122), Expect = 4e-09
Identities = 21/134 (15%), Positives = 38/134 (28%), Gaps = 6/134 (4%)
Query: 33 LINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFL 92
+ AI ++ A + + + T + + KP PD +
Sbjct: 99 AQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVIS----VDAKRVFKPHPDSYA 154
Query: 93 VAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEE 152
+ + P ++ L V GAK G S V + E + L
Sbjct: 155 LVEEVLGVTP--AEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTM 212
Query: 153 FKPELYGLPPFEDK 166
FK + +
Sbjct: 213 FKALRMREETYAEA 226
Score = 27.1 bits (58), Expect = 1.1
Identities = 6/36 (16%), Positives = 8/36 (22%), Gaps = 2/36 (5%)
Query: 10 VTHVIFDMDGLLLGYNLAIGALRLINHLHKHNIPFA 45
+ V+FD G L A
Sbjct: 2 IKAVVFDAYGTLFDVQSVADATE--RAYPGRGEYIT 35
>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 187
Score = 49.3 bits (116), Expect = 2e-08
Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 7/60 (11%)
Query: 86 PAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADL 145
P P+ L +++ S LV D P + +AAG+ + + + D+
Sbjct: 135 PNPESMLYLREKYQ----ISSGLVIGDRPIDIEAGQAAGLDTHLFTS---IVNLRQVLDI 187
Score = 27.0 bits (58), Expect = 1.1
Identities = 7/34 (20%), Positives = 11/34 (32%), Gaps = 1/34 (2%)
Query: 11 THVIFDMDGLLLGYNLAIGALRLINHLHKHNIPF 44
I+D+ G LL + L + I
Sbjct: 4 HDYIWDLGGTLLDNYETS-TAAFVETLALYGITQ 36
>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 225
Score = 49.0 bits (115), Expect = 3e-08
Identities = 10/73 (13%), Positives = 18/73 (24%), Gaps = 2/73 (2%)
Query: 80 EVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHR 139
K + + K + L D P + A G++ + P
Sbjct: 154 NTSGKKTETQSYANILRDIGAKAS--EVLFLSDNPLELDAAAGVGIATGLASRPGNAPVP 211
Query: 140 TEAADLVLNSLEE 152
V + E
Sbjct: 212 DGQKYQVYKNFET 224
>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis
[TaxId: 1358]}
Length = 221
Score = 48.7 bits (114), Expect = 4e-08
Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Query: 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRT----EAADLVLNSLEEF 153
PS+ + ED+ G+ K +G + V P + + L L+E
Sbjct: 161 APSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEV 215
Score = 26.7 bits (57), Expect = 1.4
Identities = 5/10 (50%), Positives = 9/10 (90%)
Query: 13 VIFDMDGLLL 22
V+FD+DG++
Sbjct: 5 VLFDLDGVIT 14
>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 222
Score = 48.7 bits (114), Expect = 4e-08
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 69 FHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCV 128
F + + D + KP PD+FL A +F P +V ED+ +G+ GA+AAGM +
Sbjct: 125 FAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDR--VVVVEDSVHGIHGARAAGMRVI 182
Query: 129 MVPDP--TVPKHRTE----AADLVLNSLEEFKPEL 157
T P H A+ V++ +++ P +
Sbjct: 183 GFTGASHTYPSHADRLTDAGAETVISRMQDL-PAV 216
Score = 27.5 bits (59), Expect = 0.79
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 13 VIFDMDGLLL 22
+IFD DG+L+
Sbjct: 5 IIFDCDGVLV 14
>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 225
Score = 47.1 bits (110), Expect = 1e-07
Identities = 21/117 (17%), Positives = 39/117 (33%), Gaps = 6/117 (5%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHH--VVLGSADPEVKQGKP 86
L+ L K AI T++ + + + +L H ++ S V KP
Sbjct: 103 PMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQ--VGMVKP 160
Query: 87 APDVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAA 143
P ++ P + + +D + A+ GM ++V D E
Sbjct: 161 EPQIYKFLLDTLKASPS--EVVFLDDIGANLKPARDLGMVTILVQDTDTALKELEKV 215
Score = 25.1 bits (53), Expect = 4.2
Identities = 5/10 (50%), Positives = 8/10 (80%)
Query: 13 VIFDMDGLLL 22
+FD+DG+L
Sbjct: 5 AVFDLDGVLA 14
>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase
{Lactobacillus plantarum [TaxId: 1590]}
Length = 207
Score = 46.4 bits (108), Expect = 2e-07
Identities = 7/50 (14%), Positives = 14/50 (28%)
Query: 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEE 152
P L D+ + A+AA + + P + +
Sbjct: 153 APQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLD 202
Score = 26.8 bits (57), Expect = 1.4
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Query: 13 VIFDMDGLLLGYNLAIGALRLINH-LHKHNIPF 44
++FD+DG L N ++ L + PF
Sbjct: 6 LMFDIDGTLT--NSQPAYTTVMREVLATYGKPF 36
>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas
sp., strain YL [TaxId: 306]}
Length = 220
Score = 45.6 bits (106), Expect = 5e-07
Identities = 10/57 (17%), Positives = 15/57 (26%), Gaps = 2/57 (3%)
Query: 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRT-EAADLVLNSLEEFKPELY 158
S L GA+ G + + D + SL EL+
Sbjct: 165 DRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV-VELF 220
Score = 28.7 bits (62), Expect = 0.31
Identities = 6/37 (16%), Positives = 12/37 (32%), Gaps = 2/37 (5%)
Query: 9 YVTHVIFDMDGLLLGYNLAIGALRLINHLHKHNIPFA 45
Y+ + FD+ G L + +G +
Sbjct: 1 YIKGIAFDLYGTLFDVHSVVGRCD--EAFPGRGREIS 35
>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon
Pyrococcus horikoshii [TaxId: 53953]}
Length = 230
Score = 44.5 bits (103), Expect = 1e-06
Identities = 8/47 (17%), Positives = 20/47 (42%)
Query: 107 CLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEF 153
V ++ G+K GM+ +++ + + D +++ L E
Sbjct: 176 VYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV 222
Score = 26.7 bits (57), Expect = 1.3
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 12 HVIFDMDGLLLGYNLAIG-ALRLINHLHKH 40
V FD G LL L+++ +
Sbjct: 4 AVFFDFVGTLLSVEGEAKTHLKIMEEVLGD 33
>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 204
Score = 42.1 bits (97), Expect = 7e-06
Identities = 6/55 (10%), Positives = 16/55 (29%), Gaps = 6/55 (10%)
Query: 101 KPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFKP 155
+ D V A+ +G+ + + T + + +L +
Sbjct: 151 QLNSDNTYYIGDRTLDVEFAQNSGIQSINFLES------TYEGNHRIQALADISR 199
Score = 27.5 bits (59), Expect = 0.62
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Query: 11 THVIFDMDGLLLGYNLAIGALRLINH-LHKHNIPF 44
T I+D+DG LL AI L I + +IP+
Sbjct: 2 TAFIWDLDGTLLDSYEAI--LSGIEETFAQFSIPY 34
>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase
domain {Bacteriophage T4 [TaxId: 10665]}
Length = 149
Score = 40.9 bits (95), Expect = 1e-05
Identities = 20/135 (14%), Positives = 34/135 (25%), Gaps = 17/135 (12%)
Query: 13 VIFDMDGLLL-----------GYNLAI---GALRLINHLHKHNIPFAIATSSAKESFEL- 57
VIFD+DG L + + + L + + + E
Sbjct: 10 VIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDP 69
Query: 58 --KTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPN 115
+ ++ V L + DV P L +D
Sbjct: 70 TKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQ 129
Query: 116 GVLGAKAAGMSCVMV 130
V + G+ C V
Sbjct: 130 VVEMWRRIGVECWQV 144
>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium
tepidum [TaxId: 1097]}
Length = 228
Score = 40.9 bits (94), Expect = 2e-05
Identities = 7/57 (12%), Positives = 16/57 (28%), Gaps = 2/57 (3%)
Query: 103 QPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEA--ADLVLNSLEEFKPEL 157
PS+ ++ D + + A+ + V + + E L
Sbjct: 167 SPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVL 223
Score = 26.3 bits (56), Expect = 2.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 13 VIFDMDGLLL 22
V+FD+DG LL
Sbjct: 5 VLFDIDGTLL 14
>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus
cereus [TaxId: 1396]}
Length = 257
Score = 40.9 bits (94), Expect = 2e-05
Identities = 18/102 (17%), Positives = 32/102 (31%), Gaps = 4/102 (3%)
Query: 29 GALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAP 88
G +I L + I T +E ++ +V +V G+P P
Sbjct: 103 GVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTP---DDVPAGRPYP 159
Query: 89 DVFLVAAKRFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMV 130
+ A + + D + + + AGM V V
Sbjct: 160 WMCYKNAMELG-VYPMNHMIKVGDTVSDMKEGRNAGMWTVGV 200
Score = 30.1 bits (66), Expect = 0.11
Identities = 7/35 (20%), Positives = 11/35 (31%)
Query: 10 VTHVIFDMDGLLLGYNLAIGALRLINHLHKHNIPF 44
+ VIF G + Y + HK +
Sbjct: 2 IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAI 36
>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 210
Score = 39.4 bits (90), Expect = 7e-05
Identities = 8/57 (14%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Query: 98 FDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEA--ADLVLNSLEE 152
+ P + ++ D +LGA+ G+ + + + D + + E
Sbjct: 148 QTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLE 204
Score = 27.9 bits (60), Expect = 0.51
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 7 LNYVTHVIFDMDGLLL 22
+ +T + FD+DG L+
Sbjct: 1 MTSITAIFFDLDGTLV 16
>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga
maritima [TaxId: 2336]}
Length = 261
Score = 38.5 bits (88), Expect = 2e-04
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 5 QVLNYVTHVIFDMDG-LLLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHK 63
VL+ + I DMDG L +L G+L + L + N F T+++ + + +
Sbjct: 2 HVLDKIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLR 61
Query: 64 D 64
+
Sbjct: 62 N 62
Score = 30.8 bits (68), Expect = 0.066
Identities = 14/94 (14%), Positives = 26/94 (27%), Gaps = 5/94 (5%)
Query: 69 FHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQPSKCLVFEDAPNG-VLGAKAAGMSC 127
+ S + P+ +V + + D V K AG+
Sbjct: 167 IMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVS 226
Query: 128 VMVP----DPTVPKHRTEAADLVLNSLEEFKPEL 157
++V P + D V +L E +
Sbjct: 227 ILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 260
>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate
phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii
[TaxId: 53953]}
Length = 243
Score = 37.3 bits (85), Expect = 3e-04
Identities = 7/37 (18%), Positives = 12/37 (32%)
Query: 13 VIFDMDGLLLGYNLAIGALRLINHLHKHNIPFAIATS 49
+ D+D L+ A +I L +S
Sbjct: 5 IFLDIDKTLIPGYEPDPAKPIIEELKDMGFEIIFNSS 41
>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}
Length = 250
Score = 37.0 bits (84), Expect = 4e-04
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 13 VIFDMDGLLLGYNLAI-GALRLINHLHKHNIPFAIATSSAKESFE 56
VI D+DG+L+ N+A+ GA ++ + +P + T+ ++ +
Sbjct: 6 VICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQ 50
Score = 31.2 bits (69), Expect = 0.047
Identities = 8/63 (12%), Positives = 18/63 (28%), Gaps = 5/63 (7%)
Query: 95 AKRFDEKPQPSKCLVFEDAPNG-VLGAKAAGMSCVMVP----DPTVPKHRTEAADLVLNS 149
A + + ++ D +L AG+ ++V + S
Sbjct: 184 AALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243
Query: 150 LEE 152
+ E
Sbjct: 244 VAE 246
>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c
{Streptococcus mutans [TaxId: 1309]}
Length = 253
Score = 36.9 bits (84), Expect = 5e-04
Identities = 8/45 (17%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 13 VIFDMDG-LLLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFE 56
+ D+DG + G + + L + +P+ + T++ + E
Sbjct: 5 YLIDLDGTIYKGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPE 49
Score = 33.5 bits (75), Expect = 0.008
Identities = 9/57 (15%), Positives = 20/57 (35%), Gaps = 5/57 (8%)
Query: 102 PQPSKCLVFEDAPNG-VLGAKAAGMSCVMVP----DPTVPKHRTEAADLVLNSLEEF 153
+ + ++ D + ++ ++V P D VL+SL E+
Sbjct: 195 VKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW 251
>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188
{Enterococcus faecalis [TaxId: 1351]}
Length = 253
Score = 37.0 bits (84), Expect = 5e-04
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 13 VIFDMDG-LLLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFELKTSRHKDTLKLFHH 71
+ D+DG + LG R + L + ++PF T++ +S E R + +
Sbjct: 5 YLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVP 64
Score = 34.3 bits (77), Expect = 0.004
Identities = 9/64 (14%), Positives = 21/64 (32%), Gaps = 5/64 (7%)
Query: 96 KRFDEKPQPSKCLVFEDAPNG-VLGAKAAGMSCVMVPDPTVPKHRTEAA----DLVLNSL 150
+ + ++ D + G+ ++V PK V++SL
Sbjct: 189 AIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSL 248
Query: 151 EEFK 154
+E+
Sbjct: 249 DEWT 252
>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953
{Synechocystis sp. pcc 6803 [TaxId: 1148]}
Length = 244
Score = 36.9 bits (84), Expect = 6e-04
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 13 VIFDMDGLLLGYNLAIGALRLINHLHKHNIPFAIATSSAKESFE 56
+I D+D +G A+ L+ + N A AT + S
Sbjct: 6 LISDLDNTWVGDQQALEHLQEYLGDRRGNFYLAYATGRSYHSAR 49
>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 247
Score = 36.8 bits (83), Expect = 7e-04
Identities = 11/55 (20%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 103 QPSKCLVFEDAP-NGVLGAKAAGMSCVMVPDPT--VPKHRTEAADLVLNSLEEFK 154
QP C++ D + G AG+ + + + VP + +++S+ E
Sbjct: 180 QPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELP 234
Score = 26.4 bits (56), Expect = 1.7
Identities = 8/22 (36%), Positives = 12/22 (54%), Gaps = 4/22 (18%)
Query: 1 MNISQVLNYVTHVIFDMDGLLL 22
M +S+V V FD+D L+
Sbjct: 1 MGLSRV----RAVFFDLDNTLI 18
>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph
{Haemophilus somnus [TaxId: 731]}
Length = 224
Score = 36.4 bits (82), Expect = 7e-04
Identities = 9/53 (16%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Query: 102 PQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEA--ADLVLNSLEE 152
P + L D+ N + A +AG + V + D + + +
Sbjct: 166 LYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFAD 218
Score = 26.4 bits (56), Expect = 1.7
Identities = 5/10 (50%), Positives = 8/10 (80%)
Query: 13 VIFDMDGLLL 22
+ FD+DG L+
Sbjct: 7 IGFDLDGTLV 16
>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate
phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}
Length = 232
Score = 35.1 bits (79), Expect = 0.002
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 13 VIFDMDGLLLGYNLAI--GALRLINHLHKHNIPFAIATS 49
V D+DG LL + A + L + N+P + +S
Sbjct: 7 VFSDLDGTLLDSHSYDWQPAAPWLTRLREANVPVILCSS 45
>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia
coli [TaxId: 562]}
Length = 271
Score = 34.5 bits (78), Expect = 0.003
Identities = 9/39 (23%), Positives = 13/39 (33%), Gaps = 2/39 (5%)
Query: 13 VIFDMDGLLLGYNLAI--GALRLINHLHKHNIPFAIATS 49
+ DMDG LL + I I + + T
Sbjct: 7 IAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTG 45
>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 225
Score = 34.6 bits (78), Expect = 0.003
Identities = 8/46 (17%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Query: 13 VIFDMDGLLLGYNLAI--GALRLINHLHKHNIPFAIATSSAKESFE 56
D+DG L + I A+ I K + ++ + +
Sbjct: 6 AAIDVDGNLTDRDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVY 51
>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus
subtilis [TaxId: 1423]}
Length = 285
Score = 34.5 bits (78), Expect = 0.004
Identities = 7/39 (17%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Query: 13 VIFDMDGLLLGYNLAI--GALRLINHLHKHNIPFAIATS 49
+ D+DG LL + + + I ++T
Sbjct: 4 IAIDLDGTLLNSKHQVSLENENALRQAQRDGIEVVVSTG 42
>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 230
Score = 33.8 bits (76), Expect = 0.005
Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Query: 13 VIFDMDGLLLGYNLAI--GALRLINHLHKHNIPFAIATSSAKESFE 56
+ D+DG + N I AL I IP + T + + E
Sbjct: 5 ISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAE 50
>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium
vivax [TaxId: 5855]}
Length = 283
Score = 33.1 bits (74), Expect = 0.011
Identities = 8/47 (17%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Query: 13 VIFDMDG-LLLGYNLAI--GALRLINHLHKHNIPFAIATSSAKESFE 56
++ D DG L + ++ + + I + +I T +K
Sbjct: 13 LLIDFDGTLFVDKDIKVPSENIDAIKEAIEKGYMVSICTGRSKVGIL 59
>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV)
{Escherichia coli [TaxId: 562]}
Length = 269
Score = 33.0 bits (74), Expect = 0.012
Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Query: 13 VIFDMDGLLLGYNLAI---GALRLINHLHKHNIPFAIATS 49
++ DMDG L + L K I F +A+
Sbjct: 5 IVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASG 44
>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 244
Score = 32.4 bits (72), Expect = 0.016
Identities = 8/40 (20%), Positives = 12/40 (30%), Gaps = 2/40 (5%)
Query: 13 VIFDMDGLLLGYNLAI--GALRLINHLHKHNIPFAIATSS 50
+FD+DG L I + L + S
Sbjct: 4 CLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSD 43
>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 243
Score = 31.9 bits (71), Expect = 0.025
Identities = 8/40 (20%), Positives = 13/40 (32%), Gaps = 2/40 (5%)
Query: 13 VIFDMDGLLLGYNLAI--GALRLINHLHKHNIPFAIATSS 50
+FD+DG L I + L + + S
Sbjct: 6 CLFDVDGTLTAPRQKITKEMDDFLQKLRQKIKIGVVGGSD 45
>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 260
Score = 31.8 bits (71), Expect = 0.025
Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Query: 13 VIFDMDGLLLGYN---LAIGALRLINHLHKHNIPFAIATSSAKESFE 56
+ FD+DG L+ + + + + H + IAT K
Sbjct: 4 LFFDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIIN 50
>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon
Methanococcus jannaschii [TaxId: 2190]}
Length = 210
Score = 31.7 bits (70), Expect = 0.028
Identities = 9/49 (18%), Positives = 15/49 (30%), Gaps = 4/49 (8%)
Query: 101 KPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNS 149
+ D N + K AG+ P + E AD+ +
Sbjct: 155 GINLEDTVAVGDGANDISMFKKAGLKIAFCAKPIL----KEKADICIEK 199
Score = 24.8 bits (52), Expect = 5.0
Identities = 4/10 (40%), Positives = 7/10 (70%)
Query: 13 VIFDMDGLLL 22
++FD D L+
Sbjct: 7 ILFDFDSTLV 16
>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559
{Mesorhizobium loti [TaxId: 381]}
Length = 209
Score = 31.5 bits (70), Expect = 0.037
Identities = 20/171 (11%), Positives = 39/171 (22%), Gaps = 30/171 (17%)
Query: 13 VIFDMDGLL---LGYNLAI-------GALRLINHLHKHNIPFAIATSSAKESFELKTSRH 62
+ D DG + Y L I ++ IP + T+ + +
Sbjct: 26 LFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSA 85
Query: 63 KDTLKLF-------------------HHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQ 103
+ +H P+ ++
Sbjct: 86 FAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALD 145
Query: 104 PSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTVPKHRTEAADLVLNSLEEFK 154
+ L+ D + K AG++ + D A L E
Sbjct: 146 LQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIR-PLRDSSELG 195
>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga
maritima [TaxId: 2336]}
Length = 267
Score = 29.2 bits (64), Expect = 0.23
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 13 VIFDMDGLLLGYNLAI--GALRLINHLHKHNIPFAIATS 49
+FD+DG LL NL I R I L + A+
Sbjct: 5 FVFDLDGTLLNDNLEISEKDRRNIEKLSR-KCYVVFASG 42
>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde
dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}
Length = 154
Score = 28.7 bits (63), Expect = 0.24
Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Query: 23 GYNLAI-GA-----LRLINHLHKHNIPFAIATSSAKESFELKTSRHKD 64
GY +A+ GA ++I L + +P A K+ + KD
Sbjct: 1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKD 48
>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional
protein HisB, phosphatase domain {Escherichia coli
[TaxId: 562]}
Length = 161
Score = 28.3 bits (62), Expect = 0.36
Identities = 16/143 (11%), Positives = 35/143 (24%), Gaps = 25/143 (17%)
Query: 13 VIFDMDGLL---LGYNLAI----------GALRLINHLHKHNIPFAIATSSAKESFELKT 59
+ D DG L + + G + + L K + T+ +
Sbjct: 5 LFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFP 64
Query: 60 SRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFL-VAAKRFDEKPQ-----------PSKC 107
D + S + + P + R + +
Sbjct: 65 QADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANS 124
Query: 108 LVFEDAPNGVLGAKAAGMSCVMV 130
V D + A+ G++ +
Sbjct: 125 YVIGDRATDIQLAENMGINGLRY 147
>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3'
phosphatase, middle domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 195
Score = 27.4 bits (60), Expect = 0.83
Identities = 19/136 (13%), Positives = 38/136 (27%), Gaps = 26/136 (19%)
Query: 13 VIFDMDGLLLGYN--------------LAIGALRLINHLHKHNIPFAIATSSA------- 51
FD+DG L+ L + + L I T+
Sbjct: 24 AAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKL 83
Query: 52 -KESFELKTSRHKDTLKLFHHVVLGSADPEVKQGKPAPDVFLVAAKRFDEKPQ--PSKCL 108
E F+ K + L + V++ + + KP ++ ++ +E +
Sbjct: 84 PAEVFKGKVEAVLEKLGVPFQVLVATHAGLNR--KPVSGMWDHLQEQANEGIPISVEDSV 141
Query: 109 VFEDAPNGVLGAKAAG 124
DA +
Sbjct: 142 FVGDAAGRLANWAPGR 157
>d1lcya2 b.47.1.1 (A:6-210) Mitochondrial serine protease HtrA2,
catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 205
Score = 25.7 bits (55), Expect = 2.8
Identities = 9/40 (22%), Positives = 16/40 (40%), Gaps = 9/40 (22%)
Query: 14 IFDMDGLLLGYNLAIGALRLINHLHKHNIPFAIATSSAKE 53
+ ++DG ++G N I FAI + +E
Sbjct: 172 LVNLDGEVIGVNTMKVT---------AGISFAIPSDRLRE 202
>d1y23a_ d.13.1.1 (A:) Hit {Bacillus subtilis [TaxId: 1423]}
Length = 139
Score = 24.9 bits (53), Expect = 4.1
Identities = 10/35 (28%), Positives = 13/35 (37%)
Query: 9 YVTHVIFDMDGLLLGYNLAIGALRLINHLHKHNIP 43
F+ GL N A + + H H H IP
Sbjct: 69 RAIRDEFEPIGLNTLNNNGEKAGQSVFHYHMHIIP 103
>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related
protein {Archaeon Thermoplasma acidophilum [TaxId:
2303]}
Length = 229
Score = 24.9 bits (53), Expect = 5.6
Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 8/51 (15%)
Query: 13 VIFDMDGLLLGYN-------LAIGALRLINHLHKHNIPFAIATSSAKESFE 56
+ D DG L+ G L LI+ L + I T + E
Sbjct: 3 IFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERF-DTYIVTGRSPEEIS 52
>d2fcla1 d.218.1.11 (A:1-157) Hypothetical protein TM1012
{Thermotoga maritima [TaxId: 2336]}
Length = 157
Score = 24.6 bits (53), Expect = 6.0
Identities = 2/20 (10%), Positives = 9/20 (45%)
Query: 32 RLINHLHKHNIPFAIATSSA 51
++ + L + + + S +
Sbjct: 12 KIYDRLKNEKVNWVVTGSLS 31
>d1ffvb2 d.133.1.1 (B:147-803) Carbon monoxide (CO) dehydrogenase
molybdoprotein {Hydrogenophaga pseudoflava [TaxId:
47421]}
Length = 657
Score = 24.6 bits (52), Expect = 9.3
Identities = 9/39 (23%), Positives = 13/39 (33%)
Query: 97 RFDEKPQPSKCLVFEDAPNGVLGAKAAGMSCVMVPDPTV 135
E P +P+ +GAK S + PT
Sbjct: 583 TAVETPHWETDHTVTPSPHHPIGAKGVAESPHVGSIPTF 621
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.137 0.404
Gapped
Lambda K H
0.267 0.0474 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 613,761
Number of extensions: 26857
Number of successful extensions: 163
Number of sequences better than 10.0: 1
Number of HSP's gapped: 155
Number of HSP's successfully gapped: 76
Length of query: 166
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 87
Effective length of database: 1,322,926
Effective search space: 115094562
Effective search space used: 115094562
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.3 bits)