Query psy629
Match_columns 166
No_of_seqs 102 out of 239
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 22:39:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy629.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/629hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xsa_A Ogoga, hyaluronoglucosa 100.0 1.4E-66 4.9E-71 461.2 16.6 166 1-166 31-197 (447)
2 2cho_A Glucosaminidase, hexosa 100.0 2.5E-35 8.5E-40 274.5 19.6 152 1-165 158-315 (716)
3 2v5c_A O-GLCNACASE NAGJ; glyco 100.0 1.1E-33 3.7E-38 258.9 15.4 154 1-165 180-341 (594)
4 2v5d_A O-GLCNACASE NAGJ; famil 100.0 6.8E-33 2.3E-37 258.6 14.0 154 1-165 180-341 (737)
5 2epl_X N-acetyl-beta-D-glucosa 96.0 0.06 2E-06 49.5 11.7 108 6-117 127-257 (627)
6 2bdq_A Copper homeostasis prot 94.1 0.77 2.6E-05 37.1 11.4 55 37-92 50-105 (224)
7 2ftp_A Hydroxymethylglutaryl-C 93.2 0.44 1.5E-05 39.3 8.9 84 6-92 103-186 (302)
8 2cw6_A Hydroxymethylglutaryl-C 92.9 0.85 2.9E-05 37.5 10.1 87 5-94 99-185 (298)
9 1twd_A Copper homeostasis prot 92.2 1.7 5.7E-05 35.8 10.8 55 37-92 47-102 (256)
10 1ydn_A Hydroxymethylglutaryl-C 91.7 0.82 2.8E-05 37.4 8.5 80 12-93 104-183 (295)
11 1jak_A Beta-N-acetylhexosamini 91.6 1.9 6.6E-05 38.4 11.4 102 1-117 188-340 (512)
12 1ydo_A HMG-COA lyase; TIM-barr 91.5 1 3.5E-05 37.5 9.1 87 5-94 100-186 (307)
13 3ble_A Citramalate synthase fr 91.2 0.9 3.1E-05 38.2 8.5 83 5-93 115-197 (337)
14 1now_A Beta-hexosaminidase bet 88.0 3.2 0.00011 36.9 10.0 116 1-119 182-348 (507)
15 2xn2_A Alpha-galactosidase; hy 86.0 6.8 0.00023 36.4 11.2 56 29-84 397-483 (732)
16 4aie_A Glucan 1,6-alpha-glucos 84.3 3.8 0.00013 35.3 8.2 60 27-88 79-203 (549)
17 4gqr_A Pancreatic alpha-amylas 81.9 3.9 0.00013 34.4 7.2 24 27-50 76-99 (496)
18 1h1n_A Endo type cellulase ENG 81.9 15 0.00051 29.5 10.5 104 21-131 65-172 (305)
19 2f2h_A Putative family 31 gluc 80.0 24 0.00083 32.9 12.4 60 20-84 323-417 (773)
20 3n9k_A Glucan 1,3-beta-glucosi 79.8 3.6 0.00012 35.4 6.3 32 20-51 105-138 (399)
21 3tb6_A Arabinose metabolism tr 78.8 11 0.00037 28.9 8.4 120 32-158 90-234 (298)
22 1h4p_A Glucan 1,3-beta-glucosi 78.5 5.7 0.00019 33.9 7.2 55 20-74 105-173 (408)
23 3ewb_X 2-isopropylmalate synth 78.3 4.4 0.00015 33.3 6.2 81 5-94 99-179 (293)
24 1i60_A IOLI protein; beta barr 77.7 7.9 0.00027 29.7 7.3 51 24-75 80-131 (278)
25 1ua7_A Alpha-amylase; beta-alp 77.5 6.8 0.00023 33.2 7.4 56 26-81 73-171 (422)
26 3iwp_A Copper homeostasis prot 77.5 30 0.001 28.8 15.3 115 39-161 87-216 (287)
27 2yfo_A Alpha-galactosidase-suc 77.4 25 0.00084 32.5 11.6 56 29-84 393-479 (720)
28 2gjx_A Beta-hexosaminidase alp 77.0 20 0.0007 31.7 10.5 116 1-119 176-343 (507)
29 2q02_A Putative cytoplasmic pr 76.9 6.5 0.00022 30.3 6.6 29 24-53 81-109 (272)
30 3gv0_A Transcriptional regulat 76.9 6.3 0.00021 30.6 6.5 56 33-88 81-138 (288)
31 1i60_A IOLI protein; beta barr 76.3 5.9 0.0002 30.5 6.2 54 29-83 47-104 (278)
32 1x7f_A Outer surface protein; 75.4 4.2 0.00014 35.3 5.5 48 24-81 70-121 (385)
33 3mi6_A Alpha-galactosidase; NE 75.0 33 0.0011 32.1 11.7 57 29-85 394-481 (745)
34 2zvr_A Uncharacterized protein 74.6 24 0.00081 27.5 9.5 60 25-87 110-171 (290)
35 1uas_A Alpha-galactosidase; TI 74.3 11 0.00039 31.4 7.8 56 29-84 75-131 (362)
36 3qxb_A Putative xylose isomera 74.0 6.5 0.00022 31.5 6.0 56 27-86 157-214 (316)
37 2z1k_A (NEO)pullulanase; hydro 73.9 11 0.00037 32.2 7.7 61 27-89 96-206 (475)
38 3dx5_A Uncharacterized protein 73.9 29 0.00098 26.8 12.2 56 28-84 48-105 (286)
39 2g3m_A Maltase, alpha-glucosid 73.1 57 0.0019 29.9 13.1 61 20-85 227-322 (693)
40 1wza_A Alpha-amylase A; hydrol 72.7 13 0.00045 31.9 8.0 62 27-90 81-202 (488)
41 1to3_A Putative aldolase YIHT; 72.6 17 0.00057 30.0 8.3 59 24-84 138-198 (304)
42 3dx5_A Uncharacterized protein 72.5 14 0.00049 28.6 7.6 48 24-72 80-128 (286)
43 1zy9_A Alpha-galactosidase; TM 72.3 9.2 0.00031 34.4 7.1 57 30-88 252-342 (564)
44 4aef_A Neopullulanase (alpha-a 72.1 12 0.00042 33.5 7.9 24 27-50 285-308 (645)
45 1c7s_A Beta-N-acetylhexosamini 71.9 9.8 0.00034 36.2 7.5 65 21-88 396-515 (858)
46 2q02_A Putative cytoplasmic pr 71.5 31 0.0011 26.2 13.4 55 28-83 51-105 (272)
47 2aam_A Hypothetical protein TM 71.2 3.4 0.00012 34.6 3.7 60 55-116 114-175 (309)
48 1lwj_A 4-alpha-glucanotransfer 71.0 15 0.0005 31.2 7.8 60 27-88 69-189 (441)
49 3qk7_A Transcriptional regulat 70.9 13 0.00046 28.8 7.1 56 32-87 79-136 (294)
50 3ngf_A AP endonuclease, family 70.9 11 0.00038 29.2 6.6 57 24-82 89-149 (269)
51 1k77_A EC1530, hypothetical pr 70.8 13 0.00044 28.4 6.9 53 27-85 123-178 (260)
52 4fnq_A Alpha-galactosidase AGA 70.6 50 0.0017 30.4 11.8 57 28-84 392-479 (729)
53 3vni_A Xylose isomerase domain 70.5 35 0.0012 26.4 11.3 56 28-83 47-108 (294)
54 2guy_A Alpha-amylase A; (beta- 70.2 16 0.00055 31.2 8.0 24 27-50 97-120 (478)
55 3ucq_A Amylosucrase; thermosta 69.2 11 0.00039 34.1 7.1 34 53-88 259-292 (655)
56 2p0o_A Hypothetical protein DU 68.9 4.4 0.00015 35.0 4.1 47 25-81 47-97 (372)
57 3eeg_A 2-isopropylmalate synth 68.8 10 0.00034 31.6 6.2 95 5-118 100-194 (325)
58 1pno_A NAD(P) transhydrogenase 68.8 4.6 0.00016 31.5 3.7 22 29-50 42-63 (180)
59 3vni_A Xylose isomerase domain 68.6 22 0.00075 27.6 7.9 53 27-85 131-184 (294)
60 3cny_A Inositol catabolism pro 68.3 11 0.00038 29.3 6.1 51 27-85 140-190 (301)
61 3aam_A Endonuclease IV, endoiv 67.9 6.3 0.00022 30.6 4.5 27 26-53 86-112 (270)
62 2wsk_A Glycogen debranching en 67.6 21 0.00071 32.3 8.5 58 25-82 239-335 (657)
63 3rmj_A 2-isopropylmalate synth 67.5 28 0.00097 29.5 8.9 80 5-93 106-185 (370)
64 3u0h_A Xylose isomerase domain 67.5 15 0.0005 28.2 6.6 54 26-85 120-179 (281)
65 2hk0_A D-psicose 3-epimerase; 67.3 23 0.00079 28.0 7.9 53 27-85 150-203 (309)
66 1d4o_A NADP(H) transhydrogenas 67.3 5.1 0.00018 31.3 3.7 52 29-91 41-95 (184)
67 2nx9_A Oxaloacetate decarboxyl 67.2 52 0.0018 28.9 10.7 61 28-94 127-187 (464)
68 2fsv_C NAD(P) transhydrogenase 67.2 5.1 0.00017 31.8 3.7 22 29-50 65-86 (203)
69 3tva_A Xylose isomerase domain 67.1 18 0.00063 28.1 7.2 53 24-78 98-154 (290)
70 1djl_A Transhydrogenase DIII; 66.9 5.2 0.00018 31.9 3.7 52 29-91 64-118 (207)
71 2x7v_A Probable endonuclease 4 66.7 9.7 0.00033 29.5 5.4 48 26-74 87-134 (287)
72 1uok_A Oligo-1,6-glucosidase; 66.4 22 0.00074 31.3 8.2 33 54-88 170-202 (558)
73 1qtw_A Endonuclease IV; DNA re 66.1 17 0.00058 28.0 6.7 51 26-77 87-140 (285)
74 1m53_A Isomaltulose synthase; 65.9 20 0.00068 31.6 7.9 34 53-88 183-216 (570)
75 3k4h_A Putative transcriptiona 65.7 29 0.00099 26.5 8.0 56 33-88 84-142 (292)
76 3rot_A ABC sugar transporter, 65.7 26 0.00089 27.1 7.8 123 31-159 76-223 (297)
77 1ceo_A Cellulase CELC; glycosy 65.5 49 0.0017 26.5 9.7 30 21-50 62-91 (343)
78 3edf_A FSPCMD, cyclomaltodextr 65.5 21 0.0007 31.8 7.9 61 27-89 198-315 (601)
79 2qiw_A PEP phosphonomutase; st 65.4 46 0.0016 26.8 9.3 63 19-81 121-186 (255)
80 3kws_A Putative sugar isomeras 65.2 23 0.00078 27.5 7.4 53 27-85 145-198 (287)
81 2wc7_A Alpha amylase, catalyti 65.1 21 0.00072 30.6 7.7 60 27-88 102-213 (488)
82 2zic_A Dextran glucosidase; TI 64.4 20 0.0007 31.4 7.6 60 27-88 78-197 (543)
83 1rqb_A Transcarboxylase 5S sub 64.3 80 0.0027 28.3 11.5 61 28-94 144-204 (539)
84 1d3c_A Cyclodextrin glycosyltr 64.2 18 0.00063 32.7 7.5 61 27-89 115-233 (686)
85 3cqj_A L-ribulose-5-phosphate 64.2 18 0.00063 28.2 6.7 20 26-45 106-125 (295)
86 3nco_A Endoglucanase fncel5A; 64.0 28 0.00096 27.8 7.9 29 22-50 76-104 (320)
87 3ozo_A N-acetylglucosaminidase 64.0 84 0.0029 28.4 11.9 114 1-117 218-389 (572)
88 2bru_C NAD(P) transhydrogenase 63.9 5.5 0.00019 31.1 3.3 22 29-50 49-70 (186)
89 1zja_A Trehalulose synthase; s 63.8 24 0.00081 31.0 7.9 34 53-88 170-203 (557)
90 3ivs_A Homocitrate synthase, m 63.6 12 0.0004 32.7 5.8 81 5-94 129-209 (423)
91 1jae_A Alpha-amylase; glycosid 63.1 29 0.00099 29.7 8.2 61 27-89 74-189 (471)
92 2qul_A D-tagatose 3-epimerase; 63.0 19 0.00064 27.8 6.4 53 27-85 132-185 (290)
93 1v8f_A Pantoate-beta-alanine l 62.9 3.3 0.00011 34.3 2.0 99 31-130 33-174 (276)
94 3zss_A Putative glucanohydrola 62.9 22 0.00075 32.8 7.7 60 27-88 320-417 (695)
95 3ues_A Alpha-1,3/4-fucosidase; 62.7 15 0.0005 32.6 6.3 58 26-86 110-173 (478)
96 2vr5_A Glycogen operon protein 62.6 29 0.001 31.8 8.5 61 22-82 261-362 (718)
97 3aof_A Endoglucanase; glycosyl 62.6 38 0.0013 26.7 8.4 27 24-50 70-96 (317)
98 3m07_A Putative alpha amylase; 62.2 66 0.0023 28.9 10.7 61 27-89 202-289 (618)
99 2ze0_A Alpha-glucosidase; TIM 62.0 26 0.00089 30.7 7.8 33 54-88 170-202 (555)
100 3bmv_A Cyclomaltodextrin gluca 61.7 26 0.0009 31.7 8.0 61 27-89 116-234 (683)
101 3dbi_A Sugar-binding transcrip 61.2 35 0.0012 27.0 7.9 55 33-87 135-191 (338)
102 1bf2_A Isoamylase; hydrolase, 61.0 33 0.0011 31.6 8.6 61 22-82 267-374 (750)
103 3egc_A Putative ribose operon 60.9 17 0.00058 28.0 5.8 27 62-88 110-136 (291)
104 2zds_A Putative DNA-binding pr 60.8 25 0.00085 27.9 6.9 52 27-86 159-211 (340)
105 3o74_A Fructose transport syst 60.1 34 0.0012 25.7 7.3 56 33-88 74-131 (272)
106 2aaa_A Alpha-amylase; glycosid 59.7 25 0.00086 30.1 7.2 24 27-50 97-120 (484)
107 1gcy_A Glucan 1,4-alpha-maltot 59.7 26 0.00088 30.6 7.4 61 27-89 92-197 (527)
108 3faw_A Reticulocyte binding pr 59.6 23 0.00079 33.6 7.4 64 23-88 365-460 (877)
109 1r30_A Biotin synthase; SAM ra 59.3 18 0.00062 29.9 6.0 47 27-86 133-179 (369)
110 2bhu_A Maltooligosyltrehalose 59.2 22 0.00075 31.9 6.9 60 27-88 192-278 (602)
111 1cyg_A Cyclodextrin glucanotra 59.1 23 0.0008 32.0 7.1 61 27-89 111-229 (680)
112 2dh2_A 4F2 cell-surface antige 59.0 39 0.0013 28.6 8.2 61 27-89 81-146 (424)
113 1ht6_A AMY1, alpha-amylase iso 58.9 38 0.0013 28.3 8.0 61 27-89 68-184 (405)
114 2x7v_A Probable endonuclease 4 58.8 58 0.002 24.9 11.3 63 18-83 39-109 (287)
115 1vjz_A Endoglucanase; TM1752, 58.3 22 0.00075 28.7 6.3 29 22-50 71-99 (341)
116 2dqw_A Dihydropteroate synthas 58.3 32 0.0011 28.5 7.3 54 24-80 173-227 (294)
117 1g5a_A Amylosucrase; glycosylt 57.3 31 0.0011 31.1 7.6 34 53-88 256-289 (628)
118 3cov_A Pantothenate synthetase 56.8 6.4 0.00022 33.0 2.7 57 31-88 49-111 (301)
119 3u0h_A Xylose isomerase domain 56.8 54 0.0019 24.9 8.1 54 28-83 47-104 (281)
120 3a5v_A Alpha-galactosidase; be 56.6 57 0.002 27.6 8.8 59 29-87 75-133 (397)
121 3hg3_A Alpha-galactosidase A; 56.4 22 0.00076 30.7 6.2 60 29-90 85-144 (404)
122 3qc0_A Sugar isomerase; TIM ba 56.3 27 0.00094 26.6 6.3 53 26-85 121-177 (275)
123 3hcw_A Maltose operon transcri 56.2 32 0.0011 26.6 6.7 120 33-158 83-225 (295)
124 3g85_A Transcriptional regulat 55.9 19 0.00067 27.5 5.3 50 38-87 88-137 (289)
125 3huu_A Transcription regulator 55.9 36 0.0012 26.4 7.0 56 33-88 98-155 (305)
126 3czg_A Sucrose hydrolase; (alp 55.8 23 0.0008 31.9 6.5 34 53-88 250-283 (644)
127 1rh9_A Endo-beta-mannanase; en 55.5 28 0.00097 28.3 6.6 55 21-75 78-155 (373)
128 1g01_A Endoglucanase; alpha/be 55.3 85 0.0029 25.7 9.7 29 22-50 84-112 (364)
129 1nvm_A HOA, 4-hydroxy-2-oxoval 55.0 21 0.0007 29.7 5.7 73 28-118 120-192 (345)
130 2e8y_A AMYX protein, pullulana 54.5 45 0.0015 30.4 8.3 62 25-88 313-409 (718)
131 3ayv_A Putative uncharacterize 54.0 17 0.00058 27.8 4.7 48 26-85 115-162 (254)
132 2j6v_A UV endonuclease, UVDE; 53.8 58 0.002 26.5 8.1 50 27-78 102-157 (301)
133 1k77_A EC1530, hypothetical pr 52.2 38 0.0013 25.6 6.4 57 24-82 81-142 (260)
134 4aee_A Alpha amylase, catalyti 52.1 36 0.0012 30.9 7.2 33 54-88 413-445 (696)
135 3p6l_A Sugar phosphate isomera 52.0 18 0.00062 27.7 4.6 49 29-85 116-164 (262)
136 1szn_A Alpha-galactosidase; (b 52.0 13 0.00046 31.9 4.1 56 28-85 77-134 (417)
137 3jy6_A Transcriptional regulat 51.4 54 0.0019 24.8 7.3 122 31-159 75-215 (276)
138 3dhu_A Alpha-amylase; structur 51.4 33 0.0011 29.0 6.5 59 27-88 83-175 (449)
139 3ayv_A Putative uncharacterize 51.2 25 0.00085 26.8 5.2 55 26-82 74-135 (254)
140 3d8u_A PURR transcriptional re 51.2 52 0.0018 24.8 7.1 54 34-87 75-130 (275)
141 1qnr_A Endo-1,4-B-D-mannanase; 51.0 17 0.00059 29.0 4.4 27 24-50 86-112 (344)
142 2ya0_A Putative alkaline amylo 50.5 39 0.0013 30.9 7.1 63 24-88 251-345 (714)
143 3bg3_A Pyruvate carboxylase, m 50.4 1.1E+02 0.0037 28.4 10.2 66 27-94 223-290 (718)
144 3qc0_A Sugar isomerase; TIM ba 50.1 38 0.0013 25.7 6.2 55 29-84 46-104 (275)
145 3k9c_A Transcriptional regulat 49.9 80 0.0027 24.1 8.1 53 35-88 83-137 (289)
146 3brq_A HTH-type transcriptiona 49.7 65 0.0022 24.3 7.5 53 35-87 94-149 (296)
147 2rgy_A Transcriptional regulat 49.7 74 0.0025 24.3 7.9 54 34-87 83-138 (290)
148 2g0w_A LMO2234 protein; putati 49.6 55 0.0019 25.6 7.2 22 26-47 103-124 (296)
149 3kws_A Putative sugar isomeras 49.4 73 0.0025 24.5 7.8 55 26-82 102-164 (287)
150 3bbl_A Regulatory protein of L 49.2 81 0.0028 24.0 8.0 54 33-86 79-134 (287)
151 1ii7_A MRE11 nuclease; RAD50, 48.6 99 0.0034 24.8 8.8 57 25-83 24-82 (333)
152 1m7x_A 1,4-alpha-glucan branch 48.6 65 0.0022 28.7 8.2 60 27-88 204-297 (617)
153 3k1d_A 1,4-alpha-glucan-branch 48.6 68 0.0023 29.7 8.5 56 27-82 312-401 (722)
154 1uuq_A Mannosyl-oligosaccharid 48.1 31 0.0011 29.2 5.8 29 22-50 105-133 (440)
155 2wvv_A Alpha-L-fucosidase; alp 48.0 13 0.00044 32.5 3.4 24 27-50 124-147 (450)
156 3cc1_A BH1870 protein, putativ 47.8 39 0.0013 29.0 6.4 54 29-82 95-183 (433)
157 1tp9_A Peroxiredoxin, PRX D (t 47.5 37 0.0012 24.2 5.4 49 25-85 54-103 (162)
158 3o1n_A 3-dehydroquinate dehydr 47.3 25 0.00086 28.6 4.9 51 28-83 146-198 (276)
159 3clk_A Transcription regulator 47.3 44 0.0015 25.6 6.1 54 34-88 81-136 (290)
160 3icg_A Endoglucanase D; cellul 47.0 55 0.0019 28.4 7.3 30 21-50 79-108 (515)
161 3nsx_A Alpha-glucosidase; stru 46.9 13 0.00043 34.2 3.3 62 20-86 215-313 (666)
162 1ea9_C Cyclomaltodextrinase; h 46.6 55 0.0019 28.9 7.4 60 27-88 218-328 (583)
163 3c3k_A Alanine racemase; struc 45.9 96 0.0033 23.6 8.4 51 36-87 82-134 (285)
164 3a21_A Putative secreted alpha 45.9 13 0.00044 33.5 3.1 55 29-83 78-142 (614)
165 3uma_A Hypothetical peroxiredo 45.9 43 0.0015 25.0 5.7 48 26-85 76-124 (184)
166 1j0h_A Neopullulanase; beta-al 45.1 89 0.0031 27.5 8.5 24 27-50 222-245 (588)
167 3tc3_A UV damage endonuclease; 44.9 75 0.0026 26.6 7.5 51 26-78 100-156 (310)
168 1hjs_A Beta-1,4-galactanase; 4 44.8 43 0.0015 27.6 6.0 32 18-49 49-81 (332)
169 4aie_A Glucan 1,6-alpha-glucos 44.5 13 0.00044 31.9 2.8 40 44-83 11-52 (549)
170 1wzl_A Alpha-amylase II; pullu 44.3 68 0.0023 28.3 7.6 56 27-82 219-324 (585)
171 2osx_A Endoglycoceramidase II; 43.9 27 0.00092 30.0 4.8 30 21-50 98-127 (481)
172 2whl_A Beta-mannanase, baman5; 43.6 38 0.0013 26.7 5.4 51 21-73 57-107 (294)
173 3aml_A OS06G0726400 protein; s 43.2 84 0.0029 29.1 8.2 59 27-87 250-346 (755)
174 2le3_A Carnitine O-palmitoyltr 43.1 1.6 5.5E-05 26.4 -2.2 18 42-59 8-26 (42)
175 3gkn_A Bacterioferritin comigr 42.8 81 0.0028 21.8 6.7 48 24-85 52-99 (163)
176 1g94_A Alpha-amylase; beta-alp 42.8 18 0.00062 30.8 3.5 22 27-48 64-85 (448)
177 4fe7_A Xylose operon regulator 42.7 1E+02 0.0036 25.2 8.2 57 32-88 88-150 (412)
178 4do4_A Alpha-N-acetylgalactosa 42.6 28 0.00095 28.9 4.6 59 29-89 84-143 (400)
179 1tvn_A Cellulase, endoglucanas 42.5 22 0.00074 28.1 3.7 48 24-73 75-122 (293)
180 3l23_A Sugar phosphate isomera 42.4 95 0.0032 24.5 7.6 52 24-78 104-159 (303)
181 2ya1_A Putative alkaline amylo 42.2 56 0.0019 31.4 7.1 64 23-88 557-652 (1014)
182 1tz9_A Mannonate dehydratase; 42.2 51 0.0017 27.0 6.1 54 27-86 197-256 (367)
183 3jug_A Beta-mannanase; TIM-bar 41.8 1.3E+02 0.0043 25.0 8.5 104 21-132 80-187 (345)
184 4h3d_A 3-dehydroquinate dehydr 41.5 42 0.0014 26.9 5.3 47 28-79 126-172 (258)
185 3lmz_A Putative sugar isomeras 41.5 31 0.0011 26.4 4.4 48 29-83 62-109 (257)
186 3ixr_A Bacterioferritin comigr 41.3 63 0.0022 23.3 6.0 47 25-85 69-115 (179)
187 3aal_A Probable endonuclease 4 41.1 45 0.0015 26.2 5.4 49 26-75 92-140 (303)
188 1egz_A Endoglucanase Z, EGZ, C 41.0 55 0.0019 25.6 5.9 27 24-50 73-99 (291)
189 3kke_A LACI family transcripti 41.0 77 0.0026 24.4 6.7 55 33-88 87-142 (303)
190 3iix_A Biotin synthetase, puta 40.7 46 0.0016 26.8 5.5 53 26-83 176-228 (348)
191 1sfl_A 3-dehydroquinate dehydr 40.6 34 0.0012 27.0 4.6 51 28-83 112-164 (238)
192 2fep_A Catabolite control prot 40.6 73 0.0025 24.4 6.5 54 34-87 88-143 (289)
193 3bdk_A D-mannonate dehydratase 40.6 48 0.0016 28.3 5.8 51 28-86 200-258 (386)
194 3ktc_A Xylose isomerase; putat 40.3 75 0.0026 25.4 6.7 50 26-76 105-159 (333)
195 1yx1_A Hypothetical protein PA 40.0 30 0.001 26.6 4.1 52 29-86 113-164 (264)
196 3eyp_A Putative alpha-L-fucosi 39.9 19 0.00063 31.7 3.1 57 26-87 102-168 (469)
197 3inn_A Pantothenate synthetase 39.8 12 0.0004 31.7 1.7 28 105-132 173-201 (314)
198 1tz9_A Mannonate dehydratase; 39.6 1.3E+02 0.0044 24.5 8.2 59 21-83 51-115 (367)
199 3bdk_A D-mannonate dehydratase 39.5 54 0.0018 27.9 5.9 61 20-83 59-124 (386)
200 3m0z_A Putative aldolase; MCSG 39.2 34 0.0012 27.9 4.3 59 26-96 172-237 (249)
201 3ndz_A Endoglucanase D; cellot 38.9 82 0.0028 25.7 6.9 29 22-50 77-105 (345)
202 3l55_A B-1,4-endoglucanase/cel 38.8 28 0.00097 29.0 4.0 30 21-50 84-113 (353)
203 2qul_A D-tagatose 3-epimerase; 38.8 91 0.0031 23.8 6.8 56 28-83 47-108 (290)
204 2zxd_A Alpha-L-fucosidase, put 37.7 27 0.00091 30.6 3.8 24 26-49 150-173 (455)
205 3iqw_A Tail-anchored protein t 37.7 1.7E+02 0.0058 24.0 11.0 113 26-151 202-320 (334)
206 3e3m_A Transcriptional regulat 37.6 1.5E+02 0.0052 23.4 10.3 57 33-89 141-199 (355)
207 3m6y_A 4-hydroxy-2-oxoglutarat 37.5 34 0.0011 28.2 4.1 59 26-96 195-260 (275)
208 3lrk_A Alpha-galactosidase 1; 37.5 1.9E+02 0.0065 25.5 9.3 56 29-88 95-152 (479)
209 1edg_A Endoglucanase A; family 37.3 28 0.00097 28.7 3.8 29 22-50 95-123 (380)
210 2o20_A Catabolite control prot 36.9 1.3E+02 0.0046 23.4 7.7 52 36-87 137-190 (332)
211 4fqn_A Malcavernin; helical do 36.8 68 0.0023 22.5 5.0 55 19-102 26-87 (98)
212 3h5t_A Transcriptional regulat 36.4 1.6E+02 0.0054 23.3 8.7 53 33-85 143-197 (366)
213 4ad1_A Glycosyl hydrolase fami 36.3 61 0.0021 27.5 5.8 62 29-90 266-337 (380)
214 1wpc_A Glucan 1,4-alpha-maltoh 36.3 33 0.0011 29.4 4.1 24 27-50 82-105 (485)
215 1aj0_A DHPS, dihydropteroate s 36.2 72 0.0025 26.0 6.0 54 24-80 159-215 (282)
216 2qf7_A Pyruvate carboxylase pr 36.2 1.4E+02 0.0048 29.1 8.8 66 27-94 671-738 (1165)
217 1ud2_A Amylase, alpha-amylase; 36.1 33 0.0011 29.3 4.1 24 27-50 80-103 (480)
218 2y8k_A Arabinoxylanase, carboh 36.1 90 0.0031 26.9 6.9 50 26-75 78-127 (491)
219 1lwj_A 4-alpha-glucanotransfer 36.0 19 0.00064 30.5 2.5 39 45-83 3-43 (441)
220 3rcn_A Beta-N-acetylhexosamini 35.9 1.3E+02 0.0044 26.9 8.0 95 20-118 219-356 (543)
221 2jep_A Xyloglucanase; family 5 35.8 30 0.001 28.5 3.7 29 22-50 104-132 (395)
222 3bh4_A Alpha-amylase; calcium, 35.6 34 0.0012 29.2 4.1 24 27-50 78-101 (483)
223 3gza_A Putative alpha-L-fucosi 35.4 24 0.00082 30.9 3.1 28 26-53 107-134 (443)
224 3h5o_A Transcriptional regulat 35.4 1.6E+02 0.0054 23.0 8.0 54 33-86 133-187 (339)
225 3cs3_A Sugar-binding transcrip 35.3 42 0.0014 25.5 4.2 54 34-87 73-128 (277)
226 1xla_A D-xylose isomerase; iso 34.9 86 0.003 26.0 6.4 55 26-82 114-179 (394)
227 3kjx_A Transcriptional regulat 34.8 1.6E+02 0.0056 23.0 7.9 55 33-87 139-195 (344)
228 1xim_A D-xylose isomerase; iso 34.6 67 0.0023 26.6 5.7 50 25-75 113-167 (393)
229 3ayr_A Endoglucanase; TIM barr 34.6 37 0.0013 28.1 4.0 29 22-50 97-125 (376)
230 3av0_A DNA double-strand break 34.5 1.2E+02 0.0042 25.0 7.3 57 25-83 44-102 (386)
231 3l23_A Sugar phosphate isomera 34.4 1.7E+02 0.0057 23.0 11.0 54 30-84 61-129 (303)
232 2yr1_A 3-dehydroquinate dehydr 34.1 51 0.0018 26.3 4.7 51 29-84 127-179 (257)
233 3qxb_A Putative xylose isomera 33.9 1.2E+02 0.0041 23.8 6.9 63 22-84 63-135 (316)
234 2zvr_A Uncharacterized protein 33.5 1.6E+02 0.0055 22.6 11.6 120 29-159 69-201 (290)
235 1muw_A Xylose isomerase; atomi 33.3 1E+02 0.0035 25.4 6.6 48 26-74 114-166 (386)
236 1vpq_A Hypothetical protein TM 33.2 1.9E+02 0.0064 23.2 8.1 54 32-86 165-252 (273)
237 1mxg_A Alpha amylase; hyperthe 33.1 40 0.0014 28.6 4.1 23 27-49 86-108 (435)
238 1wky_A Endo-beta-1,4-mannanase 33.1 2.3E+02 0.0078 24.2 9.0 52 21-74 65-116 (464)
239 3bma_A D-alanyl-lipoteichoic a 33.0 58 0.002 28.2 5.1 58 24-81 272-334 (407)
240 1hvx_A Alpha-amylase; hydrolas 32.8 41 0.0014 29.2 4.2 24 27-50 81-104 (515)
241 2vef_A Dihydropteroate synthas 32.7 79 0.0027 26.2 5.8 53 27-80 178-231 (314)
242 3cyv_A URO-D, UPD, uroporphyri 32.6 76 0.0026 25.9 5.7 44 56-100 172-223 (354)
243 2wnw_A Activated by transcript 32.4 49 0.0017 28.5 4.6 64 19-83 163-236 (447)
244 4du5_A PFKB; structural genomi 32.2 1.5E+02 0.0051 23.6 7.3 27 23-49 166-192 (336)
245 1zja_A Trehalulose synthase; s 32.1 32 0.0011 30.2 3.4 40 44-83 11-52 (557)
246 2iks_A DNA-binding transcripti 32.0 75 0.0026 24.3 5.3 26 62-87 123-148 (293)
247 1gqi_A Alpha-glucuronidase; (a 32.0 3E+02 0.01 25.6 9.9 129 22-158 213-354 (708)
248 2zds_A Putative DNA-binding pr 31.8 52 0.0018 25.9 4.4 58 25-84 108-180 (340)
249 2pwj_A Mitochondrial peroxired 31.7 1.1E+02 0.0036 22.1 5.8 50 24-85 60-111 (171)
250 3bil_A Probable LACI-family tr 31.6 1.4E+02 0.0048 23.7 7.0 54 33-86 137-193 (348)
251 3h75_A Periplasmic sugar-bindi 31.3 1.1E+02 0.0039 24.0 6.4 58 30-87 75-155 (350)
252 2eja_A URO-D, UPD, uroporphyri 31.2 1.6E+02 0.0055 23.7 7.4 65 58-125 166-238 (338)
253 3mub_A Alanine racemase; alpha 31.0 1.4E+02 0.0047 24.9 7.1 53 28-83 109-163 (367)
254 3p6l_A Sugar phosphate isomera 30.9 65 0.0022 24.5 4.7 56 18-83 56-111 (262)
255 3gh5_A HEX1, beta-hexosaminida 30.8 2.8E+02 0.0097 24.5 13.1 83 21-117 252-365 (525)
256 2wfc_A Peroxiredoxin 5, PRDX5; 30.7 1.1E+02 0.0039 21.9 5.9 48 26-85 51-99 (167)
257 1w8s_A FBP aldolase, fructose- 30.6 1.3E+02 0.0046 23.8 6.7 61 21-84 118-180 (263)
258 3lhx_A Ketodeoxygluconokinase; 30.6 1.6E+02 0.0053 23.2 7.1 27 24-50 145-171 (319)
259 1xla_A D-xylose isomerase; iso 30.4 1.3E+02 0.0044 24.9 6.8 56 27-83 68-136 (394)
260 3igz_B Cofactor-independent ph 30.1 1.7E+02 0.0058 26.5 7.8 51 27-77 139-192 (561)
261 1bxb_A Xylose isomerase; xylos 30.0 78 0.0027 26.2 5.3 50 25-75 113-167 (387)
262 4gbu_A NADPH dehydrogenase 1; 29.8 62 0.0021 27.4 4.7 63 21-83 89-192 (400)
263 1dxe_A 2-dehydro-3-deoxy-galac 29.8 1.3E+02 0.0045 23.6 6.5 49 21-84 190-238 (256)
264 2x7x_A Sensor protein; transfe 29.7 2E+02 0.0067 22.3 7.6 56 31-86 77-137 (325)
265 1o98_A 2,3-bisphosphoglycerate 29.7 2E+02 0.0067 25.6 8.1 54 27-83 126-182 (511)
266 2qjg_A Putative aldolase MJ040 29.6 1.5E+02 0.0052 22.9 6.8 57 24-84 128-187 (273)
267 2xz9_A Phosphoenolpyruvate-pro 29.5 1.2E+02 0.0039 25.2 6.3 58 19-88 225-282 (324)
268 3aam_A Endonuclease IV, endoiv 29.1 1.9E+02 0.0064 21.9 7.9 54 29-83 50-108 (270)
269 1twd_A Copper homeostasis prot 29.0 1.2E+02 0.0041 24.6 6.1 28 21-48 66-94 (256)
270 2ze0_A Alpha-glucosidase; TIM 28.8 39 0.0013 29.6 3.4 40 44-83 10-51 (555)
271 2xmo_A LMO2642 protein; phosph 28.7 1.6E+02 0.0054 24.3 7.1 56 26-83 77-132 (443)
272 4f82_A Thioredoxin reductase; 28.7 1.5E+02 0.0052 22.2 6.4 48 26-85 67-115 (176)
273 2ki0_A DS119; beta-alpha-beta, 28.7 21 0.00073 20.1 1.1 16 29-44 16-31 (36)
274 3ksm_A ABC-type sugar transpor 28.6 1.7E+02 0.0057 21.7 6.7 56 31-86 74-136 (276)
275 1prx_A HORF6; peroxiredoxin, h 28.0 1.1E+02 0.0039 23.2 5.6 26 24-50 48-73 (224)
276 2ztj_A Homocitrate synthase; ( 28.0 1.2E+02 0.0043 25.4 6.3 63 23-94 108-173 (382)
277 3ib7_A ICC protein; metallopho 27.9 2.1E+02 0.007 22.1 7.3 57 25-83 48-107 (330)
278 3t7v_A Methylornithine synthas 27.9 1.2E+02 0.0041 24.5 6.1 51 27-83 187-237 (350)
279 4e69_A 2-dehydro-3-deoxyglucon 27.8 2.3E+02 0.0078 22.5 8.1 26 23-48 160-185 (328)
280 1j93_A UROD, uroporphyrinogen 27.8 1.7E+02 0.0059 23.7 7.1 65 58-125 180-253 (353)
281 2inf_A URO-D, UPD, uroporphyri 27.7 2.5E+02 0.0084 22.9 10.8 42 57-99 179-228 (359)
282 2wan_A Pullulanase; hydrolase, 27.6 47 0.0016 31.5 3.9 65 22-88 526-625 (921)
283 3ipw_A Hydrolase TATD family p 27.5 53 0.0018 27.3 3.8 24 28-51 77-106 (325)
284 2h3h_A Sugar ABC transporter, 27.3 2.1E+02 0.0072 21.9 9.0 56 32-87 73-133 (313)
285 1q1q_A SULT2B1A, sulfotransfer 27.2 15 0.00051 30.7 0.4 37 16-53 264-301 (350)
286 4ay7_A Methylcobalamin\: coenz 27.0 1.7E+02 0.0058 23.8 6.9 89 27-122 134-244 (348)
287 1yf3_A DNA adenine methylase; 27.0 1.1E+02 0.0036 24.3 5.4 29 21-49 184-212 (259)
288 3cny_A Inositol catabolism pro 27.0 2.1E+02 0.0071 21.8 7.9 59 25-84 87-161 (301)
289 2zic_A Dextran glucosidase; TI 26.9 43 0.0015 29.3 3.3 40 44-83 10-51 (543)
290 1nm3_A Protein HI0572; hybrid, 26.8 1.5E+02 0.0052 22.2 6.2 26 25-50 52-77 (241)
291 1tx2_A DHPS, dihydropteroate s 26.8 1.3E+02 0.0044 24.7 6.0 55 24-81 178-235 (297)
292 3ngf_A AP endonuclease, family 26.7 2.1E+02 0.0071 21.7 11.5 56 30-85 50-115 (269)
293 2ob3_A Parathion hydrolase; me 26.7 1E+02 0.0036 24.9 5.4 19 32-50 78-98 (330)
294 1m53_A Isomaltulose synthase; 26.6 45 0.0015 29.4 3.4 40 44-83 24-65 (570)
295 1xim_A D-xylose isomerase; iso 26.6 2E+02 0.0069 23.6 7.4 57 27-84 68-137 (393)
296 1qho_A Alpha-amylase; glycosid 26.6 56 0.0019 29.5 4.1 23 27-49 107-129 (686)
297 3io3_A DEHA2D07832P; chaperone 26.5 2.7E+02 0.0092 22.9 9.0 98 42-152 232-330 (348)
298 2g0w_A LMO2234 protein; putati 26.5 2.2E+02 0.0077 22.0 7.8 53 29-82 69-124 (296)
299 3ptw_A Malonyl COA-acyl carrie 26.4 72 0.0025 26.3 4.4 50 30-79 255-318 (336)
300 1yzm_A FYVE-finger-containing 26.4 1.2E+02 0.004 18.7 5.4 33 25-73 9-41 (51)
301 1wza_A Alpha-amylase A; hydrol 26.3 32 0.0011 29.4 2.3 40 44-83 6-55 (488)
302 2hk0_A D-psicose 3-epimerase; 26.3 2.3E+02 0.0078 22.0 12.3 56 28-84 66-128 (309)
303 1qtw_A Endonuclease IV; DNA re 26.3 2.1E+02 0.0072 21.6 13.2 56 29-84 48-110 (285)
304 1dbq_A Purine repressor; trans 26.2 2.1E+02 0.007 21.4 8.0 49 40-88 86-137 (289)
305 3a24_A Alpha-galactosidase; gl 26.2 60 0.0021 29.8 4.2 58 17-85 339-396 (641)
306 2cks_A Endoglucanase E-5; carb 26.0 56 0.0019 25.9 3.6 26 25-50 77-102 (306)
307 4a5z_A MITD1, MIT domain-conta 26.0 73 0.0025 24.3 4.0 29 22-50 82-110 (163)
308 4aio_A Limit dextrinase; hydro 25.8 68 0.0023 29.2 4.5 27 24-50 375-401 (884)
309 3f4w_A Putative hexulose 6 pho 25.8 98 0.0034 22.9 4.8 43 28-82 90-133 (211)
310 2y24_A Xylanase; hydrolase, GH 25.7 32 0.0011 29.0 2.1 52 17-69 100-159 (383)
311 2q8u_A Exonuclease, putative; 25.7 2.5E+02 0.0086 22.3 8.1 56 24-82 44-102 (336)
312 3iv3_A Tagatose 1,6-diphosphat 25.3 2.1E+02 0.0073 23.9 7.2 59 25-83 144-210 (332)
313 3loo_A Anopheles gambiae adeno 25.2 1.1E+02 0.0036 24.9 5.3 23 27-49 191-213 (365)
314 1uok_A Oligo-1,6-glucosidase; 25.0 42 0.0014 29.4 2.8 40 44-83 10-51 (558)
315 3bc9_A AMYB, alpha amylase, ca 25.0 63 0.0022 28.8 4.1 22 27-48 208-229 (599)
316 2v2g_A Peroxiredoxin 6; oxidor 25.0 1.5E+02 0.0052 22.9 5.9 26 24-50 46-71 (233)
317 3qz6_A HPCH/HPAI aldolase; str 25.0 1.2E+02 0.0042 24.0 5.5 51 21-85 188-238 (261)
318 1muw_A Xylose isomerase; atomi 24.8 2E+02 0.0067 23.6 6.9 57 27-84 68-137 (386)
319 3aj7_A Oligo-1,6-glucosidase; 24.8 49 0.0017 29.4 3.3 40 44-83 19-60 (589)
320 3vup_A Beta-1,4-mannanase; TIM 24.7 55 0.0019 24.9 3.2 30 21-50 83-112 (351)
321 2v5j_A 2,4-dihydroxyhept-2-ENE 24.5 1.8E+02 0.0062 23.4 6.5 49 22-85 212-260 (287)
322 3mng_A Peroxiredoxin-5, mitoch 24.5 80 0.0027 23.2 4.0 49 25-85 62-111 (173)
323 3pnx_A Putative sulfurtransfer 24.4 58 0.002 24.4 3.2 20 28-47 102-121 (160)
324 3aj7_A Oligo-1,6-glucosidase; 24.0 71 0.0024 28.3 4.2 24 27-50 87-110 (589)
325 3glc_A Aldolase LSRF; TIM barr 23.9 1.9E+02 0.0065 23.6 6.5 63 18-84 148-210 (295)
326 1olt_A Oxygen-independent copr 23.9 1.3E+02 0.0045 25.6 5.8 59 17-83 181-240 (457)
327 2h6r_A Triosephosphate isomera 23.6 56 0.0019 25.2 3.1 22 29-50 99-120 (219)
328 3qr3_A Endoglucanase EG-II; TI 23.5 3.1E+02 0.01 22.5 13.2 105 21-132 77-189 (340)
329 3gyb_A Transcriptional regulat 23.2 2.3E+02 0.008 21.0 7.2 113 40-160 78-211 (280)
330 3drn_A Peroxiredoxin, bacterio 23.1 1.6E+02 0.0056 20.3 5.4 48 24-85 46-93 (161)
331 3tr9_A Dihydropteroate synthas 23.1 1.3E+02 0.0043 25.1 5.3 57 24-80 173-232 (314)
332 4exq_A UPD, URO-D, uroporphyri 23.0 47 0.0016 27.8 2.7 42 58-100 184-233 (368)
333 3hh8_A Metal ABC transporter s 22.9 2.9E+02 0.01 22.1 8.9 51 27-89 218-268 (294)
334 2h0a_A TTHA0807, transcription 22.9 68 0.0023 24.1 3.4 54 34-87 71-124 (276)
335 2vws_A YFAU, 2-keto-3-deoxy su 22.8 2.2E+02 0.0075 22.5 6.6 47 23-84 192-238 (267)
336 2egz_A 3-dehydroquinate dehydr 22.5 1.2E+02 0.004 23.5 4.8 50 30-84 97-147 (219)
337 3otx_A Adenosine kinase, putat 22.5 1.3E+02 0.0045 23.9 5.3 22 28-49 178-199 (347)
338 2c0h_A Mannan endo-1,4-beta-ma 22.5 1.4E+02 0.0048 23.6 5.4 27 25-51 88-114 (353)
339 3vas_A Putative adenosine kina 22.4 1.9E+02 0.0066 23.5 6.3 23 27-49 193-215 (370)
340 2vp8_A Dihydropteroate synthas 22.2 1.4E+02 0.0047 24.8 5.4 55 24-79 191-246 (318)
341 4hty_A Cellulase; (alpha/beta) 22.2 98 0.0034 25.3 4.5 28 23-50 116-143 (359)
342 3pzg_A Mannan endo-1,4-beta-ma 22.2 42 0.0015 28.5 2.3 52 24-75 96-165 (383)
343 2f9i_B Acetyl-coenzyme A carbo 22.1 2.5E+02 0.0085 22.7 6.9 65 23-87 138-205 (285)
344 2aaa_A Alpha-amylase; glycosid 21.9 40 0.0014 28.8 2.1 24 60-83 40-63 (484)
345 4acy_A Endo-alpha-mannosidase; 21.8 1.3E+02 0.0043 25.6 5.2 60 29-88 262-331 (382)
346 1fob_A Beta-1,4-galactanase; B 21.7 93 0.0032 25.5 4.2 23 27-49 59-81 (334)
347 2vk2_A YTFQ, ABC transporter p 21.3 2.7E+02 0.0094 21.1 7.2 55 32-86 74-137 (306)
348 3ff4_A Uncharacterized protein 21.2 84 0.0029 22.2 3.4 24 28-52 69-92 (122)
349 1gjw_A Maltodextrin glycosyltr 21.1 87 0.003 27.9 4.2 25 26-50 180-204 (637)
350 3inp_A D-ribulose-phosphate 3- 21.1 84 0.0029 25.1 3.7 27 28-54 121-147 (246)
351 2hwg_A Phosphoenolpyruvate-pro 21.0 2E+02 0.0069 25.8 6.6 57 19-88 474-531 (575)
352 2qv5_A AGR_C_5032P, uncharacte 20.8 1.4E+02 0.0049 24.0 5.1 45 26-78 196-240 (261)
353 2ze3_A DFA0005; organic waste 20.4 3.4E+02 0.012 21.8 7.8 65 19-85 120-188 (275)
354 2i5g_A Amidohydrolase; NYSGXRC 20.3 2.3E+02 0.0079 23.3 6.4 48 67-114 103-152 (325)
355 2fcl_A Hypothetical protein TM 20.2 91 0.0031 23.3 3.6 52 21-72 13-75 (169)
356 2fyw_A Conserved hypothetical 20.2 2.5E+02 0.0087 22.2 6.5 47 31-82 49-100 (267)
357 1ece_A Endocellulase E1; glyco 20.1 84 0.0029 25.2 3.6 25 25-49 92-116 (358)
358 3m9w_A D-xylose-binding peripl 20.0 2.9E+02 0.01 21.0 7.1 56 31-86 73-132 (313)
No 1
>2xsa_A Ogoga, hyaluronoglucosaminidase; O-GLCNACYLATION, O-GLCNACASE, glycosyl hydrolase, hydrolase; 2.00A {Oceanicola granulosus} PDB: 2xsb_A*
Probab=100.00 E-value=1.4e-66 Score=461.20 Aligned_cols=166 Identities=44% Similarity=0.771 Sum_probs=162.6
Q ss_pred CCeeeeccCCChhhhhhhccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCee
Q psy629 1 MDSYLYAPKDDYKHRAYWRDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGF 80 (166)
Q Consensus 1 mN~YiYAPKdDpyhr~~Wre~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~F 80 (166)
||+||||||||||||.+|||+||++|+++|++|+++|+++||+|+||||||++|+||+++|+++|++||+||+++|||+|
T Consensus 31 mNtYiYAPKDDpyhr~~WRe~Yp~eel~~l~eLv~~a~~~~V~Fv~aisPG~di~~s~~~d~~~L~~K~~ql~~lGVr~F 110 (447)
T 2xsa_A 31 MNTYIYGPKDDVHVRARWRVPYDAAGLARLTELRDAAAARGMVFYVSLAPCLDVTYSDPQDRAALLARVDQLARAGLRNL 110 (447)
T ss_dssp CCEEEECCTTCTTTTTTTTSCCCHHHHHHHHHHHHHHHTTTCEEEEEECCCSSCCTTCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CceEEEccCCChHHHHhhcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHHHHhCCCEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHhhHHHHHHHHHHHHHHHcCCC-CceEccccccccccCCCCCChhHHHHHhhccCCCceEEe
Q psy629 81 ALLFDDIESEMSEADKEVFQSFAHAQVSVTNEVFEHLGQP-KFMLCPTQYCSTRAVPNVKNSEYLNTLGSKLAKEIDIMW 159 (166)
Q Consensus 81 ailfDDi~~~~~~~d~~~f~~~a~aq~~l~n~v~~~l~~~-~l~~cPt~Y~~~~~~~~~~~~~Yl~~l~~~L~~~i~i~W 159 (166)
|||||||++.+|.+|++.|+++|++|++|+|+|+++++++ +|+||||+||++|+++++++++||++|+++||++|+|||
T Consensus 111 aIlfDDI~~~~~~~d~~~f~s~a~aQ~~l~N~v~~~l~~~~~l~~cPt~Y~~~~~~~~~~~s~Yl~~l~~~Ld~~I~V~W 190 (447)
T 2xsa_A 111 VLLFDDIPSVLPEADRHRFDSFAEAQADLSNMVLRHLRGAGHVVFCPTEYCGRMAGGDPRGSAYLQRLGSTLDPAIDIFW 190 (447)
T ss_dssp EEECSSCCSSCCTTTTTTCSSHHHHHHHHHHHHHHHTTTSSEEEEECSSCSHHHHTSSGGGCHHHHHHHHHSCTTSEEEE
T ss_pred EEeccCCCCccchhhhhhhhhHHHHHHHHHHHHHHHhCCCCceEEeChhhcCCcccCCCCCcHHHHHHHhhCCCCCeEEe
Confidence 9999999999999999999999999999999999999987 799999999999999988889999999999999999999
Q ss_pred eCCCCCC
Q psy629 160 TGPKVPK 166 (166)
Q Consensus 160 TG~~V~~ 166 (166)
||++|+.
T Consensus 191 TG~~V~s 197 (447)
T 2xsa_A 191 TGPEIVS 197 (447)
T ss_dssp CCSSSSC
T ss_pred cCCcccC
Confidence 9999973
No 2
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A*
Probab=100.00 E-value=2.5e-35 Score=274.46 Aligned_cols=152 Identities=41% Similarity=0.743 Sum_probs=138.9
Q ss_pred CCeeeeccCCChhhhh-hhccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCe
Q psy629 1 MDSYLYAPKDDYKHRA-YWRDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRG 79 (166)
Q Consensus 1 mN~YiYAPKdDpyhr~-~Wre~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~ 79 (166)
||+|.|.|+||||||. .||..||+.+.+++++|++.|+++||+||+.||||.+++|+ ++++.+|++||+||+++|||+
T Consensus 158 lN~~h~hl~Ddp~~~~~~wr~~yP~lt~~ei~elv~yA~~rgI~vvpeI~Pg~~~~~~-~~~~~~l~~k~~~l~~lG~r~ 236 (716)
T 2cho_A 158 MNTYIYGPKDDPYHSAPNWRLPYPDKEAAQLQELVAVANENEVDFVWAIHPGQDIKWN-KEDRDLLLAKFEKMYQLGVRS 236 (716)
T ss_dssp CCEEEECCTTCTTTSTTGGGSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTTCCSS-HHHHHHHHHHHHHHHHTTCCE
T ss_pred CcEEEEeeccCcccccccccccCChhhHHHHHHHHHHHHHcCCEEEEeecccccCCCC-HHHHHHHHHHHHHHHhcCCCe
Confidence 8999999999999995 99999999999999999999999999999999999999996 688999999999999999999
Q ss_pred eEEecCCCCCCCCHHHHHHHhhHHHHHHHHHHHHHHHcCC-----CCceEccccccccccCCCCCChhHHHHHhhccCCC
Q psy629 80 FALLFDDIESEMSEADKEVFQSFAHAQVSVTNEVFEHLGQ-----PKFMLCPTQYCSTRAVPNVKNSEYLNTLGSKLAKE 154 (166)
Q Consensus 80 FailfDDi~~~~~~~d~~~f~~~a~aq~~l~n~v~~~l~~-----~~l~~cPt~Y~~~~~~~~~~~~~Yl~~l~~~L~~~ 154 (166)
|+|+||||.+..+. +.+|++++|++.+++-. .+|+||||+|+..|..+. +.|+++||++||++
T Consensus 237 ~~i~~Dd~~~~g~~---------~~~~~~ll~~~~~~~~~~~~~~~~l~~~Pt~Y~~~~~~~~---~~y~~~l~~~l~~~ 304 (716)
T 2cho_A 237 FAVFFDDISGEGTN---------PQKQAELLNYIDEKFAQVKPDINQLVMCPTEYNKSWSNPN---GNYLTTLGDKLNPS 304 (716)
T ss_dssp EEEECCSCCSGGGC---------HHHHHHHHHHHHHHTTTTSSSCCCEEEECSSCSGGGSCTT---SSHHHHHHHHSCTT
T ss_pred eEEecccCCCCCcc---------hHHHHHHHHHHHHHHHhhcCCcccceeCcHHHhhhccccc---chHHHHHhhhCCcc
Confidence 99999999986542 35799999999988632 369999999999876542 68999999999999
Q ss_pred ceEEeeCCCCC
Q psy629 155 IDIMWTGPKVP 165 (166)
Q Consensus 155 i~i~WTG~~V~ 165 (166)
|+|||||+.|+
T Consensus 305 I~v~wTG~~V~ 315 (716)
T 2cho_A 305 IQIMWTGDRVI 315 (716)
T ss_dssp SEEEECCSSSS
T ss_pred ceEEecCCccc
Confidence 99999999997
No 3
>2v5c_A O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrolase, coiled coil, family 84 glycoside hydrolase, carbohydrate binding module; 2.10A {Clostridium perfringens} PDB: 2cbj_A* 2cbi_A 2vur_A* 2x0y_A* 2j62_A* 2wb5_A* 2xpk_A* 2yds_A* 2ydr_A* 2ydq_A*
Probab=100.00 E-value=1.1e-33 Score=258.91 Aligned_cols=154 Identities=32% Similarity=0.630 Sum_probs=139.9
Q ss_pred CCeeeeccCCChhhhhhhccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC---HHHHHHHHHHHHHHHHcCC
Q psy629 1 MDSYLYAPKDDYKHRAYWRDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSS---GKEVATLKRKLEQVAQFGC 77 (166)
Q Consensus 1 mN~YiYAPKdDpyhr~~Wre~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~---~~d~~~L~~K~~ql~~lGv 77 (166)
||+|.|.++||+|||..||++||.++.+++++|++.|+++||+|+++||||+++++++ .++++.|.+|+++|.+.|+
T Consensus 180 lN~~h~Hl~DDq~~~~~wr~~Yp~~~~~~i~elv~yA~~rgI~vv~~i~Pe~d~~~~~~~~~~~~~~l~~k~~~l~~~G~ 259 (594)
T 2v5c_A 180 LNTYIYAPKDDPYHREKWREPYPESEMQRMQELINASAENKVDFVFGISPGIDIRFDGDAGEEDFNHLITKAESLYDMGV 259 (594)
T ss_dssp CCEEEECCTTCGGGTTTTTSCCCGGGHHHHHHHHHHHHHTTCEEEEEECGGGTCCCSTHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CcEEEEecccCcccccccCCCCCHHHHHHHHHHHHHHHHCCcEEEEecCCCccccCCCcchHHHHHHHHHHHHHHHhcCC
Confidence 8999999999999999999999999999999999999999999999999999999997 6799999999999999999
Q ss_pred CeeEEecCCCCCCCCHHHHHHHhhHHHHHHHHHHHHHHH-----cCCCCceEccccccccccCCCCCChhHHHHHhhccC
Q psy629 78 RGFALLFDDIESEMSEADKEVFQSFAHAQVSVTNEVFEH-----LGQPKFMLCPTQYCSTRAVPNVKNSEYLNTLGSKLA 152 (166)
Q Consensus 78 r~FailfDDi~~~~~~~d~~~f~~~a~aq~~l~n~v~~~-----l~~~~l~~cPt~Y~~~~~~~~~~~~~Yl~~l~~~L~ 152 (166)
++|.|.+|||..... .+|+.++|++.+. .+..+++|||++|+.+++.++...++|+++|+++||
T Consensus 260 ~~f~IG~DEi~~~~~-----------~~q~~v~n~~~~~~~~a~~~~~~~i~~P~~Y~~~~~~~~~~~~~Y~~~l~~~L~ 328 (594)
T 2v5c_A 260 RSFAIYWDDIQDKSA-----------AKHAQVLNRFNEEFVKAKGDVKPLITVPTEYDTGAMVSNGQPRAYTRIFAETVD 328 (594)
T ss_dssp CEEEEECSSCSCCCH-----------HHHHHHHHHHHHHTHHHHSSCCCCEEECSSCSHHHHEETTEECHHHHHHHHHSC
T ss_pred cEEEecCccCCcccc-----------hhHHHHHHHHHHHHHHhhcccCceEEecccccccccccCccchHHHHHhhhhCC
Confidence 999999999997643 4678888877532 234579999999999877666667899999999999
Q ss_pred CCceEEeeCCCCC
Q psy629 153 KEIDIMWTGPKVP 165 (166)
Q Consensus 153 ~~i~i~WTG~~V~ 165 (166)
++|.|||||++|+
T Consensus 329 ~~I~v~WTG~~V~ 341 (594)
T 2v5c_A 329 PSIEVMWTGPGVV 341 (594)
T ss_dssp TTSEEEECSSSSS
T ss_pred CCcEEEeCCCccc
Confidence 9999999999997
No 4
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=100.00 E-value=6.8e-33 Score=258.56 Aligned_cols=154 Identities=32% Similarity=0.630 Sum_probs=135.2
Q ss_pred CCeeeeccCCChhhhhhhccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC---HHHHHHHHHHHHHHHHcCC
Q psy629 1 MDSYLYAPKDDYKHRAYWRDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSS---GKEVATLKRKLEQVAQFGC 77 (166)
Q Consensus 1 mN~YiYAPKdDpyhr~~Wre~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~---~~d~~~L~~K~~ql~~lGv 77 (166)
||+|.|.++||++||..||++||.++.+++++|++.|+++||+|+++||||+++++++ .++++.|.+||++|.+.|+
T Consensus 180 ~N~~h~hl~Dd~~~~~~wr~~y~~~~~~~~~elv~ya~~rgI~vv~~i~P~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~ 259 (737)
T 2v5d_A 180 LNTYIYAPKDDPYHREKWREPYPESEMQRMQELINASAENKVDFVFGISPGIDIRFDGDAGEEDFNHLITKAESLYDMGV 259 (737)
T ss_dssp CCEEECCCSCCSTTTTTC-----CTTHHHHHHHHHHHHHTTCEEEECCCCGGGCCCSSBTTHHHHHHHHHHHHHHHHHTC
T ss_pred CeEEEEecccccchhhccCcCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCccccCCCcccHHHHHHHHHHHHHHHhcCC
Confidence 8999999999999999999999999999999999999999999999999999999986 6899999999999999999
Q ss_pred CeeEEecCCCCCCCCHHHHHHHhhHHHHHHHHHHHHHHH-----cCCCCceEccccccccccCCCCCChhHHHHHhhccC
Q psy629 78 RGFALLFDDIESEMSEADKEVFQSFAHAQVSVTNEVFEH-----LGQPKFMLCPTQYCSTRAVPNVKNSEYLNTLGSKLA 152 (166)
Q Consensus 78 r~FailfDDi~~~~~~~d~~~f~~~a~aq~~l~n~v~~~-----l~~~~l~~cPt~Y~~~~~~~~~~~~~Yl~~l~~~L~ 152 (166)
++|.|++|||..... .+|+.++|++.+. .+..+++|||++|+.+++.++...++|+++|++.||
T Consensus 260 ~~f~ig~DEi~~~~~-----------~~q~~v~~~~~~~~~~~~~~~~~~i~~P~~y~~~~~~~~~~~~~y~~~~~~~L~ 328 (737)
T 2v5d_A 260 RSFAIYWDDIQDKSA-----------AKHAQVLNRFNEEFVKAKGDVKPLITVPTEYDTGAMVSNGQPRAYTRIFAETVD 328 (737)
T ss_dssp CEEEEECSSCCCCCH-----------HHHHHHHHHHHHHTHHHHSSCCCCEEECSCCBHHHHBSSSSBCHHHHHHHHHSC
T ss_pred cEEEEcCccCCcccc-----------hhHHHHHHHHHHHHHHhhcccCceEEecccccccccccCccchHHHHHHHhhCC
Confidence 999999999997543 4678888877532 234679999999999877666678899999999999
Q ss_pred CCceEEeeCCCCC
Q psy629 153 KEIDIMWTGPKVP 165 (166)
Q Consensus 153 ~~i~i~WTG~~V~ 165 (166)
++|.|||||++|+
T Consensus 329 ~~i~v~WTG~~V~ 341 (737)
T 2v5d_A 329 PSIEVMWTGPGVV 341 (737)
T ss_dssp TTSEEEECBSSSS
T ss_pred CCceEEeCCCccc
Confidence 9999999999997
No 5
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=96.04 E-value=0.06 Score=49.49 Aligned_cols=108 Identities=16% Similarity=0.170 Sum_probs=82.2
Q ss_pred eccCCChhhhhhhccCCCHHHHHHHHHHHHHHHHCCCeEEEEec-CCC--------------------CCCCCCHHHHHH
Q psy629 6 YAPKDDYKHRAYWRDLYSVEEAEHLTGLISAAKEQGIDFYYALS-PGL--------------------DITYSSGKEVAT 64 (166)
Q Consensus 6 YAPKdDpyhr~~Wre~Yp~~~l~~l~~L~~~a~~~~v~Fv~ais-PG~--------------------~~~~s~~~d~~~ 64 (166)
|..|..|+. ..|+..|+.++ ++++++.|+++||++|--|- ||- .+|.++++.++-
T Consensus 127 ~ei~~~P~l-~~~~~~YT~~d---i~eiv~yA~~rgI~VIPEID~PGH~~a~l~~g~~~yp~L~~~~~~l~~~~~~t~~f 202 (627)
T 2epl_X 127 YEIENQPYF-GYFRGRYTVAE---LQEIEDYAADFDMSFVPCIQTLAHLSAFVKWGIKEVQELRDVEDILLIGEEKVYDL 202 (627)
T ss_dssp BCCTTCTTT-TTTTTCBCHHH---HHHHHHHHHHTTCEEEEECCSSSCCHHHHTCCSHHHHTTEEETTEECTTCHHHHHH
T ss_pred cccCCCccc-CccCCCcCHHH---HHHHHHHHHHcCCEEEEeeccCCcHHHHHhhhhhhcccccCCCCccCCCChhHHHH
Confidence 466777877 45789998876 78899999999999998884 442 256678889999
Q ss_pred HHHHHHHHHHcCCCeeEEecCCCCCCCCHH--HHHHHhhHHHHHHHHHHHHHHHc
Q psy629 65 LKRKLEQVAQFGCRGFALLFDDIESEMSEA--DKEVFQSFAHAQVSVTNEVFEHL 117 (166)
Q Consensus 65 L~~K~~ql~~lGvr~FailfDDi~~~~~~~--d~~~f~~~a~aq~~l~n~v~~~l 117 (166)
+.+-|+++.+...+.|-|-.|.+....-.+ ....+.+....|...+|+|.+.+
T Consensus 203 l~~v~~Ev~~F~~~~~HiGgDE~~~~~~~~~~~~~g~~~~~~l~~~f~~~v~~~v 257 (627)
T 2epl_X 203 IEGMFQTMAHLHTRKINIGMDEAHLVGLGRYLIKHGFQNRSLLMCQHLERVLDIA 257 (627)
T ss_dssp HHHHHHHHTTSSCCEEECCCCCCTTTTSSHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEecchhcccchhhHHHHHcCCccHHHHHHHHHHHHHHHH
Confidence 999999999977788899999998532111 22234456788999999988766
No 6
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=94.06 E-value=0.77 Score=37.13 Aligned_cols=55 Identities=15% Similarity=0.305 Sum_probs=47.5
Q ss_pred HHHCCCeEEEEecC-CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCCC
Q psy629 37 AKEQGIDFYYALSP-GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESEMS 92 (166)
Q Consensus 37 a~~~~v~Fv~aisP-G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~~ 92 (166)
|+..+|.....|.| |-||+|| ++|++.+++-+..+.++|++-|.+-+=+-++...
T Consensus 50 ~~~~~ipV~vMIRPR~GdF~Ys-~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD 105 (224)
T 2bdq_A 50 LHEKGISVAVMIRPRGGNFVYN-DLELRIMEEDILRAVELESDALVLGILTSNNHID 105 (224)
T ss_dssp HHHTTCEEEEECCSSSSCSCCC-HHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBC
T ss_pred hhhcCCceEEEECCCCCCCcCC-HHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcC
Confidence 67889999999999 9999998 5789999999999999999997776666566554
No 7
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.23 E-value=0.44 Score=39.33 Aligned_cols=84 Identities=14% Similarity=0.152 Sum_probs=54.1
Q ss_pred eccCCChhhhhhhccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 6 YAPKDDYKHRAYWRDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 6 YAPKdDpyhr~~Wre~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
+.+-.|...+.+.+.. .++-++.+++.++.|++.|+.....|+=-.+-.+.+..+.+.+++-++.+.+.|++.++|-
T Consensus 103 ~~~~s~~~~~~~~~~s-~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~-- 179 (302)
T 2ftp_A 103 FAAASEAFSQRNINCS-IKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLG-- 179 (302)
T ss_dssp EEESCHHHHHHHHSSC-HHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE--
T ss_pred EEecCHHHHHHHhCCC-HHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe--
Confidence 3444444445555544 3667899999999999999987655543111011112344667777788889999999988
Q ss_pred CCCCCCC
Q psy629 86 DIESEMS 92 (166)
Q Consensus 86 Di~~~~~ 92 (166)
|.-+...
T Consensus 180 DT~G~~~ 186 (302)
T 2ftp_A 180 DTIGVGT 186 (302)
T ss_dssp ESSSCCC
T ss_pred CCCCCcC
Confidence 5444443
No 8
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=92.86 E-value=0.85 Score=37.48 Aligned_cols=87 Identities=15% Similarity=0.180 Sum_probs=56.6
Q ss_pred eeccCCChhhhhhhccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 5 LYAPKDDYKHRAYWRDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 5 iYAPKdDpyhr~~Wre~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
++.+-.|...+.+.+.. .++-++.+++.++.+++.|+.+...|+=-.+-.+.+..+.+.+.+-++++.++|++.+.|.
T Consensus 99 i~~~~sd~~~~~~~~~~-~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~- 176 (298)
T 2cw6_A 99 IFGAASELFTKKNINCS-IEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLG- 176 (298)
T ss_dssp EEEESCHHHHHHHHSCC-HHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE-
T ss_pred EEecCCHHHHHHHhCCC-HHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEec-
Confidence 35555555444455443 4667899999999999999998776653111112222345677778888999999998866
Q ss_pred CCCCCCCCHH
Q psy629 85 DDIESEMSEA 94 (166)
Q Consensus 85 DDi~~~~~~~ 94 (166)
|=++ .+.+.
T Consensus 177 DT~G-~~~P~ 185 (298)
T 2cw6_A 177 DTIG-VGTPG 185 (298)
T ss_dssp ETTS-CCCHH
T ss_pred CCCC-CcCHH
Confidence 4444 44433
No 9
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=92.18 E-value=1.7 Score=35.83 Aligned_cols=55 Identities=22% Similarity=0.350 Sum_probs=46.7
Q ss_pred HHHCCCeEEEEecC-CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCCC
Q psy629 37 AKEQGIDFYYALSP-GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESEMS 92 (166)
Q Consensus 37 a~~~~v~Fv~aisP-G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~~ 92 (166)
.+..+|.....|.| |-||+|| ++|++.+++-+..+.++|++-|.+-+=+-++...
T Consensus 47 ~~~~~ipv~vMIRPR~GdF~Ys-~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD 102 (256)
T 1twd_A 47 RQRVTIPVHPIIRPRGGDFCYS-DGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVD 102 (256)
T ss_dssp HHHCCSCEEEBCCSSSSCSCCC-HHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBC
T ss_pred HHHcCCceEEEECCCCCCCcCC-HHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcC
Confidence 34568999999999 8899998 5789999999999999999997776666666554
No 10
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=91.66 E-value=0.82 Score=37.36 Aligned_cols=80 Identities=19% Similarity=0.160 Sum_probs=50.4
Q ss_pred hhhhhhhccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCC
Q psy629 12 YKHRAYWRDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESEM 91 (166)
Q Consensus 12 pyhr~~Wre~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~ 91 (166)
+.|+...-..=.++-++.+++.++.|++.|+...-.|+--.+-.+.+..+.+.+.+-++.+.++|++.++|. |.-|..
T Consensus 104 ~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~--Dt~G~~ 181 (295)
T 1ydn_A 104 EGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLG--DTIGRG 181 (295)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEE--ETTSCC
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEec--CCCCCc
Confidence 345444333334566899999999999999998744443110011112235667777778889999999987 444444
Q ss_pred CH
Q psy629 92 SE 93 (166)
Q Consensus 92 ~~ 93 (166)
.+
T Consensus 182 ~P 183 (295)
T 1ydn_A 182 TP 183 (295)
T ss_dssp CH
T ss_pred CH
Confidence 43
No 11
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=91.58 E-value=1.9 Score=38.45 Aligned_cols=102 Identities=14% Similarity=0.145 Sum_probs=69.9
Q ss_pred CCeeeeccCCChhhhhhhcc---CCCHH-----------------HHHHHHHHHHHHHHCCCeEEEEe-cCC--------
Q psy629 1 MDSYLYAPKDDYKHRAYWRD---LYSVE-----------------EAEHLTGLISAAKEQGIDFYYAL-SPG-------- 51 (166)
Q Consensus 1 mN~YiYAPKdDpyhr~~Wre---~Yp~~-----------------~l~~l~~L~~~a~~~~v~Fv~ai-sPG-------- 51 (166)
||.+.+-..||. -||- .||+- ..+++++|++.|+++||+++--| .||
T Consensus 188 lN~lh~HltDdq----~wriei~~~P~Lt~~ga~~~~~~~~~g~YT~~di~eiv~yA~~rgI~VIPEID~PGH~~a~l~a 263 (512)
T 1jak_A 188 YNKLHLHLSDDQ----GWRIAIDSWPRLATYGGSTEVGGGPGGYYTKAEYKEIVRYAASRHLEVVPEIDMPGHTNAALAS 263 (512)
T ss_dssp CCEEEEECBCSS----CBCBCCTTSTHHHHTTTSCCTTSSCCCCBCHHHHHHHHHHHHHTTCEEEEECCCSSSCHHHHHH
T ss_pred CcEEEEEeccCC----CceehhhhhHHHHhhcCccccCCCCCCCCCHHHHHHHHHHHHHcCCEEEEccCCCchHHHHHHh
Confidence 799999999985 3552 24432 13678999999999999999876 222
Q ss_pred ---C------------------CCCCCCHHHHHHHHHHHHHHHHcCC-CeeEEecCCCCCCCCHHHHHHHhhHHHHHHHH
Q psy629 52 ---L------------------DITYSSGKEVATLKRKLEQVAQFGC-RGFALLFDDIESEMSEADKEVFQSFAHAQVSV 109 (166)
Q Consensus 52 ---~------------------~~~~s~~~d~~~L~~K~~ql~~lGv-r~FailfDDi~~~~~~~d~~~f~~~a~aq~~l 109 (166)
+ .+|.++++.++-|.+-|+.+.++=. +.|-|--|.+... ....|..+
T Consensus 264 ypeL~~~~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~v~~Ev~~lFp~~~iHiGgDE~~~~-----------~~~l~~~f 332 (512)
T 1jak_A 264 YAELNCDGVAPPLYTGTKVGFSSLCVDKDVTYDFVDDVIGELAALTPGRYLHIGGDEAHST-----------PKADFVAF 332 (512)
T ss_dssp CGGGSTTSCCCCCCCSCCCSCCCCCTTCHHHHHHHHHHHHHHHHTCCSSEEECCCCCCTTS-----------CHHHHHHH
T ss_pred CHHhcCcCCCCccccccCcCCcccCCCCHHHHHHHHHHHHHHHHhCCCCeEEECCcccccc-----------hHHHHHHH
Confidence 1 2455678889999999999988533 3455556665422 13467777
Q ss_pred HHHHHHHc
Q psy629 110 TNEVFEHL 117 (166)
Q Consensus 110 ~n~v~~~l 117 (166)
+|++.+.+
T Consensus 333 ~~~v~~~v 340 (512)
T 1jak_A 333 MKRVQPIV 340 (512)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877655
No 12
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=91.52 E-value=1 Score=37.46 Aligned_cols=87 Identities=16% Similarity=0.189 Sum_probs=56.6
Q ss_pred eeccCCChhhhhhhccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 5 LYAPKDDYKHRAYWRDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 5 iYAPKdDpyhr~~Wre~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
++.+-.|...+.+.+-. .++-++.+++.++.+++.|+.....|+=-.+-.|.+..+.+.+.+-++++.++|++.+.|-
T Consensus 100 i~~~~sd~~~~~~l~~s-~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~- 177 (307)
T 1ydo_A 100 VFMSASETHNRKNINKS-TSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLG- 177 (307)
T ss_dssp EEEESSHHHHHTTTCSC-HHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEE-
T ss_pred EEeecCHHHHHHHhCCC-HHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEc-
Confidence 45555555444444432 4566899999999999999987766554222112222345777888888899999998866
Q ss_pred CCCCCCCCHH
Q psy629 85 DDIESEMSEA 94 (166)
Q Consensus 85 DDi~~~~~~~ 94 (166)
|.-|.+.+.
T Consensus 178 -DT~G~~~P~ 186 (307)
T 1ydo_A 178 -DTIGAANPA 186 (307)
T ss_dssp -CSSCCCCHH
T ss_pred -CCCCCcCHH
Confidence 544444433
No 13
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=91.16 E-value=0.9 Score=38.21 Aligned_cols=83 Identities=12% Similarity=0.020 Sum_probs=58.5
Q ss_pred eeccCCChhhhhhhccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 5 LYAPKDDYKHRAYWRDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 5 iYAPKdDpyhr~~Wre~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
++.+-.|...+.+.+-. .++.++.+++.++.+++.|..+.+.+.- +.++...+.+.+.+-++++.++|++.+. +
T Consensus 115 i~~~~s~~~~~~~~~~s-~~e~l~~~~~~v~~ak~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Ga~~i~--l 188 (337)
T 3ble_A 115 LLTKGSLHHLEKQLGKT-PKEFFTDVSFVIEYAIKSGLKINVYLED---WSNGFRNSPDYVKSLVEHLSKEHIERIF--L 188 (337)
T ss_dssp EEEECSHHHHHHHTCCC-HHHHHHHHHHHHHHHHHTTCEEEEEEET---HHHHHHHCHHHHHHHHHHHHTSCCSEEE--E
T ss_pred EEEecCHHHHHHHhCCC-HHHHHHHHHHHHHHHHHCCCEEEEEEEE---CCCCCcCCHHHHHHHHHHHHHcCCCEEE--E
Confidence 34555554445555543 4667899999999999999999888763 2122345678889999999999999877 4
Q ss_pred CCCCCCCCH
Q psy629 85 DDIESEMSE 93 (166)
Q Consensus 85 DDi~~~~~~ 93 (166)
=|.-+.+.+
T Consensus 189 ~DT~G~~~P 197 (337)
T 3ble_A 189 PDTLGVLSP 197 (337)
T ss_dssp ECTTCCCCH
T ss_pred ecCCCCcCH
Confidence 455554444
No 14
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=88.04 E-value=3.2 Score=36.92 Aligned_cols=116 Identities=16% Similarity=0.217 Sum_probs=76.4
Q ss_pred CCeeeeccCCCh----------hhh--hhh--ccCCCHHHHHHHHHHHHHHHHCCCeEEEEe-cCC-----------CC-
Q psy629 1 MDSYLYAPKDDY----------KHR--AYW--RDLYSVEEAEHLTGLISAAKEQGIDFYYAL-SPG-----------LD- 53 (166)
Q Consensus 1 mN~YiYAPKdDp----------yhr--~~W--re~Yp~~~l~~l~~L~~~a~~~~v~Fv~ai-sPG-----------~~- 53 (166)
||.+.+-..||. .+. ..| +..|+. +++++|++.|+++||+++=-| .|| +.
T Consensus 182 lN~lh~HltDdq~wr~e~~~~P~Lt~~Ga~~~~~~YT~---~di~eiv~yA~~rgI~VIPEID~PGH~~a~~~~~p~L~~ 258 (507)
T 1now_A 182 FNVLHWHIVDDQSFPYQSITFPELSNKGSYSLSHVYTP---NDVRMVIEYARLRGIRVLPEFDTPGHTLSWGKGQKDLLT 258 (507)
T ss_dssp CCEEEEECCCSSCCCBCCSSCHHHHHHHSSSTTSCBCH---HHHHHHHHHHHHTTCEEEEEEEESSSCTTHHHHSTTCEE
T ss_pred CcEEEEeeccCccceeeccchhhhhcccCcCCCCCCCH---HHHHHHHHHHHHcCCEEEEccCCchhHHHHHHhCHHhcc
Confidence 788988888883 111 112 445665 568899999999999999887 243 20
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHcCC-CeeEEecCCCCCC---CCHH-----HHHHH-hhHHHHHHHH
Q psy629 54 --------------ITYSSGKEVATLKRKLEQVAQFGC-RGFALLFDDIESE---MSEA-----DKEVF-QSFAHAQVSV 109 (166)
Q Consensus 54 --------------~~~s~~~d~~~L~~K~~ql~~lGv-r~FailfDDi~~~---~~~~-----d~~~f-~~~a~aq~~l 109 (166)
++-++++-++-|.+=|+.+.++=. +.|-|--|.+... .++. .++.+ .+...+|..+
T Consensus 259 ~~~~~~~~~~~~~~l~p~~~~t~~fl~~v~~Ev~~lFp~~~iHiGgDE~~~~~w~~~p~~~~~~~~~g~~~~~~~l~~~f 338 (507)
T 1now_A 259 PCYSRQNKLDSFGPINPTLNTTYSFLTTFFKEISEVFPDQFIHLGGDEVEFKCWESNPKIQDFMRQKGFGTDFKKLESFY 338 (507)
T ss_dssp ECCC----CCSEEEECTTCHHHHHHHHHHHHHHHHHCCSSEEEEECCSCCCHHHHTCHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred cCCCCCCcCCCCcccCCCcHHHHHHHHHHHHHHHHhCCCCeEeecccccccchhhcCHHHHHHHHHcCCCCCHHHHHHHH
Confidence 233356677777777787777543 5677888988742 1221 11223 3567889999
Q ss_pred HHHHHHHcCC
Q psy629 110 TNEVFEHLGQ 119 (166)
Q Consensus 110 ~n~v~~~l~~ 119 (166)
+|++.+.+..
T Consensus 339 ~~~~~~~v~~ 348 (507)
T 1now_A 339 IQKVLDIIAT 348 (507)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999877643
No 15
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=86.00 E-value=6.8 Score=36.36 Aligned_cols=56 Identities=11% Similarity=0.108 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCC------------------------------CCCCCCHHHHHHHHHHHHHHH-HcCC
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGL------------------------------DITYSSGKEVATLKRKLEQVA-QFGC 77 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~------------------------------~~~~s~~~d~~~L~~K~~ql~-~lGv 77 (166)
-|+.|++.+++.|++|+.=+.|++ -+++++++..+-+.+++..++ +.||
T Consensus 397 Glk~lv~~ih~~Glk~GlW~~P~~v~~~S~l~~~hpdw~~~~~g~~~~~~~~~~~LD~t~Pev~~~i~~~l~~~~~~~GV 476 (732)
T 2xn2_A 397 GLGHFADYVHEQGLKFGLWFEPEMISYESNLYKEHPDYLXHVPGRKPCPSRNQYVLELGRKEVRDNIFEQMVKILDSKKI 476 (732)
T ss_dssp CHHHHHHHHHHTTCEEEEEECTTEECSSSHHHHHCGGGBCCCTTSCCCCBTTBEEBCTTSHHHHHHHHHHHHHHHTTSCC
T ss_pred cHHHHHHHHHHcCCEEEEEeCccccCCCCHHHHhCchheecCCCCCCccCCceEEEcCCCHHHHHHHHHHHHHHHHHcCC
Confidence 599999999999999999999973 145667777888899988766 8999
Q ss_pred CeeEEec
Q psy629 78 RGFALLF 84 (166)
Q Consensus 78 r~Failf 84 (166)
+.|=+=|
T Consensus 477 D~~K~D~ 483 (732)
T 2xn2_A 477 DYIKWDM 483 (732)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 9988444
No 16
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=84.29 E-value=3.8 Score=35.30 Aligned_cols=60 Identities=25% Similarity=0.308 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCC-------------------------------------------------------
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPG------------------------------------------------------- 51 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG------------------------------------------------------- 51 (166)
.++|++||++|+++||+.+.=+-|.
T Consensus 79 ~~dfk~Lv~~aH~~Gi~VilD~V~NHts~~~~wf~~~~~~~~~~~~~~y~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (549)
T 4aie_A 79 MADMDELISKAKEHHIKIVMDLVVNHTSDQHKWFVEAKKGKDNQYRDYYIWRDPVDEHEPNDLKSAFSGSAWKYDERSGQ 158 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHHHHHHTTCTTSTTGGGBCEECCBTTBCSSCCBCTTSSBSEEEETTTTE
T ss_pred HHHHHHHHHHHHHCCCEEEEEECccCCcCCcchhhhhhhcccccccccccccCCcccCCCCCcccccCCCcccccccCCc
Confidence 5789999999999999998766431
Q ss_pred ----------CCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 52 ----------LDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 52 ----------~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
.++++.+++-.+.++.-+....+.||+-|= +|=+.
T Consensus 159 ~~~~~f~~~~~dln~~np~v~~~i~~~~~~W~e~gvDGfR--lD~~~ 203 (549)
T 4aie_A 159 YYLHFFADQQPDLNWQNTELRQKIYNMMNFWLDKGIGGFR--MDVIE 203 (549)
T ss_dssp EEECSSCTTSCBBCTTCHHHHHHHHHHHHHHHHTTCCEEE--ETTGG
T ss_pred eEecccCCCCCccccCCHHHHHHHHHHHHHHHHhcCCcee--EecHH
Confidence 145666777777888888888899999988 45443
No 17
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=81.94 E-value=3.9 Score=34.41 Aligned_cols=24 Identities=8% Similarity=0.346 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.++|++||++|+++||+.+.=+-|
T Consensus 76 ~~df~~lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 76 EDEFRNMVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcc
Confidence 589999999999999999875533
No 18
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=81.92 E-value=15 Score=29.48 Aligned_cols=104 Identities=9% Similarity=0.051 Sum_probs=57.9
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCC---CCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCCCHHHHH
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDI---TYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESEMSEADKE 97 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~---~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~~~~d~~ 97 (166)
.+.++.++.++++++.|+++|+..+..+|.--.. ...+.+.+..+.+++.+-+.-- . .|.|+=+..+.+. +.+
T Consensus 65 ~~~~~~l~~~~~~v~~~~~~gi~vild~h~~~~~~g~~~~~~~~~~~~~~~ia~~~~~~-~--~V~~~l~NEP~~~-~~~ 140 (305)
T 1h1n_A 65 SPDPNYLADLIATVNAITQKGAYAVVDPHNYGRYYNSIISSPSDFETFWKTVASQFASN-P--LVIFDTDNEYHDM-DQT 140 (305)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTEETTEECCCHHHHHHHHHHHHHTSTTC-T--TEEEECCSCCCSS-CHH
T ss_pred CcCHHHHHHHHHHHHHHHHCCCEEEEeccccccccCCcCCcHHHHHHHHHHHHHHhCCC-C--eEEEeccCCCCCC-CHH
Confidence 4668899999999999999999999999973211 1223455555555554433321 1 2334433333221 122
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCceEccc-cccc
Q psy629 98 VFQSFAHAQVSVTNEVFEHLGQPKFMLCPT-QYCS 131 (166)
Q Consensus 98 ~f~~~a~aq~~l~n~v~~~l~~~~l~~cPt-~Y~~ 131 (166)
. +.....++++.|.+.-+...+++|+. .|++
T Consensus 141 ~---w~~~~~~~~~~IR~~~~~~~~I~v~g~~~~~ 172 (305)
T 1h1n_A 141 L---VLNLNQAAIDGIRSAGATSQYIFVEGNSWTG 172 (305)
T ss_dssp H---HHHHHHHHHHHHHHTTCCSSCEEEECTGGGB
T ss_pred H---HHHHHHHHHHHHHhcCCCccEEEEccccccC
Confidence 2 22334455566654433245666765 4443
No 19
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A*
Probab=80.01 E-value=24 Score=32.87 Aligned_cols=60 Identities=17% Similarity=0.287 Sum_probs=46.9
Q ss_pred cCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCC-----------------------------------CCCCCHHHHHH
Q psy629 20 DLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLD-----------------------------------ITYSSGKEVAT 64 (166)
Q Consensus 20 e~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~-----------------------------------~~~s~~~d~~~ 64 (166)
+.||. .++|++.-++.|++++.-|+|+.. ++|++++..+-
T Consensus 323 ~~FPd-----p~~mv~~Lh~~G~k~~l~i~P~I~~~s~~y~e~~~~g~~vk~~~G~~~~~~~w~g~~~~~DftnP~a~~w 397 (773)
T 2f2h_A 323 LTFPD-----PEGMIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKW 397 (773)
T ss_dssp TTCSC-----HHHHHHHHHHTTCEEEEEECSEECTTSTTHHHHHHHTCBCBCTTSSBCCBSSSSTTBEEBCTTSHHHHHH
T ss_pred hhCCC-----HHHHHHHHHHCCCEEEEEecCCcCCCCHHHHHHHHCCceeECCCCCeeeeeecCCCceeeCCCCHHHHHH
Confidence 45664 568888889999999999998521 24566777788
Q ss_pred HHHHHHHHHHcCCCeeEEec
Q psy629 65 LKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 65 L~~K~~ql~~lGvr~Failf 84 (166)
...+++.+.+.||+.|-.=+
T Consensus 398 w~~~~~~l~d~Gvd~~w~D~ 417 (773)
T 2f2h_A 398 YADKLKGLVAMGVDCFKTDF 417 (773)
T ss_dssp HHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHHHhcCCCEEEccC
Confidence 88899999999999987533
No 20
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=79.76 E-value=3.6 Score=35.38 Aligned_cols=32 Identities=25% Similarity=0.435 Sum_probs=27.7
Q ss_pred cCCCHHHHHHHHHHHHHHHHCCCeEEEEec--CC
Q psy629 20 DLYSVEEAEHLTGLISAAKEQGIDFYYALS--PG 51 (166)
Q Consensus 20 e~Yp~~~l~~l~~L~~~a~~~~v~Fv~ais--PG 51 (166)
++|....++.|.++++.|+++|+..+..+| ||
T Consensus 105 ~py~~~~~~~ld~vV~~a~~~Gl~VILDlH~~pG 138 (399)
T 3n9k_A 105 DPYVQGQVQYLEKALGWARKNNIRVWIDLHGAPG 138 (399)
T ss_dssp CCCCCCHHHHHHHHHHHHHHTTCEEEEEEEECTT
T ss_pred CccchhHHHHHHHHHHHHHHCCCEEEEEecCCCc
Confidence 456555789999999999999999999998 65
No 21
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=78.80 E-value=11 Score=28.94 Aligned_cols=120 Identities=14% Similarity=0.196 Sum_probs=62.5
Q ss_pred HHHHHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCCCHHHHHHHhhHHH-----
Q psy629 32 GLISAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESEMSEADKEVFQSFAH----- 104 (166)
Q Consensus 32 ~L~~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~~~~d~~~f~~~a~----- 104 (166)
++++.+++.|+.+|.-=++ +..+.+-.....+.-..=.+.|.+.|.|.++++...-. .....-.+.|.....
T Consensus 90 ~~~~~~~~~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G~~~i~~i~~~~~-~~~~~R~~gf~~~l~~~g~~ 168 (298)
T 3tb6_A 90 GYYLNLEKNGIPFAMINASYAELAAPSFTLDDVKGGMMAAEHLLSLGHTHMMGIFKADD-TQGVKRMNGFIQAHRERELF 168 (298)
T ss_dssp HHHHHHHHTTCCEEEESSCCTTCSSCEEEECHHHHHHHHHHHHHHTTCCSEEEEEESSS-HHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCCCEEEEecCcCCCCCCEEEeCcHHHHHHHHHHHHHCCCCcEEEEcCCCC-ccHHHHHHHHHHHHHHcCCC
Confidence 4455666778888766543 22221111123455555566788899999998865322 111111222322110
Q ss_pred -------------HH---HHHHHHHHHHcCC--CCceEccccccccccCCCCCChhHHHHHhhccCCCceEE
Q psy629 105 -------------AQ---VSVTNEVFEHLGQ--PKFMLCPTQYCSTRAVPNVKNSEYLNTLGSKLAKEIDIM 158 (166)
Q Consensus 105 -------------aq---~~l~n~v~~~l~~--~~l~~cPt~Y~~~~~~~~~~~~~Yl~~l~~~L~~~i~i~ 158 (166)
.. ...+.++.+..+. +.-+||......-. --..+++.|-..|.+|.|+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ai~~~~d~~a~g------~~~al~~~g~~vP~di~vv 234 (298)
T 3tb6_A 169 PSPDMIVTFTTEEKESKLLEKVKATLEKNSKHMPTAILCYNDEIALK------VIDMLREMDLKVPEDMSIV 234 (298)
T ss_dssp CCGGGEEEECHHHHTTHHHHHHHHHHHHTTTSCCSEEECSSHHHHHH------HHHHHHHTTCCTTTTCEEE
T ss_pred CCcceEEEecccchhhhHHHHHHHHHhcCCCCCCeEEEEeCcHHHHH------HHHHHHHcCCCCCCceEEE
Confidence 00 1223333333344 56777776543221 2456777777778888876
No 22
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=78.54 E-value=5.7 Score=33.91 Aligned_cols=55 Identities=16% Similarity=0.254 Sum_probs=38.2
Q ss_pred cCCCHH-HHHHHHHHHHHHHHCCCeEEEEec--CCC-----------CCCCCCHHHHHHHHHHHHHHHH
Q psy629 20 DLYSVE-EAEHLTGLISAAKEQGIDFYYALS--PGL-----------DITYSSGKEVATLKRKLEQVAQ 74 (166)
Q Consensus 20 e~Yp~~-~l~~l~~L~~~a~~~~v~Fv~ais--PG~-----------~~~~s~~~d~~~L~~K~~ql~~ 74 (166)
++|... .++.|+++++.|+++|+..+..+| ||. ...|.++...+..++=+++|.+
T Consensus 105 ~py~~~~~l~~ld~vv~~a~~~Gi~VilDlH~~pG~qng~~~sG~~~~~~w~~~~~~~~~~~~w~~ia~ 173 (408)
T 1h4p_A 105 DPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVTINVLNYILK 173 (408)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTCCCTTSHHHHHHHHHHHHHHHH
T ss_pred CCCccccHHHHHHHHHHHHHHCCCEEEEECCCCCCccCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 356655 899999999999999999999999 442 1334444444555555555554
No 23
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=78.29 E-value=4.4 Score=33.32 Aligned_cols=81 Identities=11% Similarity=0.061 Sum_probs=53.6
Q ss_pred eeccCCChhhhhhhccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 5 LYAPKDDYKHRAYWRDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 5 iYAPKdDpyhr~~Wre~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
++.|=.|...+.+.+-. .++-++.+++.++.|++.|....+++. +++..+.+.+.+-++++.++|+..++ +
T Consensus 99 i~~~~Sd~~~~~nl~~s-~~e~l~~~~~~v~~a~~~g~~v~~~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~--l 169 (293)
T 3ewb_X 99 IFLATSDVHMEYKLKMS-RAEVLASIKHHISYARQKFDVVQFSPE------DATRSDRAFLIEAVQTAIDAGATVIN--I 169 (293)
T ss_dssp EEEECSHHHHHHTTCCC-HHHHHHHHHHHHHHHHTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHTTCCEEE--E
T ss_pred EEecCcHHHHHHHhCCC-HHHHHHHHHHHHHHHHhCCCEEEEEec------cCCCCCHHHHHHHHHHHHHcCCCEEE--e
Confidence 34444455444444422 355688999999999999998887663 12223457777888889999999876 4
Q ss_pred CCCCCCCCHH
Q psy629 85 DDIESEMSEA 94 (166)
Q Consensus 85 DDi~~~~~~~ 94 (166)
=|.-+...+.
T Consensus 170 ~DT~G~~~P~ 179 (293)
T 3ewb_X 170 PDTVGYTNPT 179 (293)
T ss_dssp ECSSSCCCHH
T ss_pred cCCCCCCCHH
Confidence 4655555443
No 24
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=77.75 E-value=7.9 Score=29.72 Aligned_cols=51 Identities=14% Similarity=0.211 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecCCCCC-CCCCHHHHHHHHHHHHHHHHc
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSPGLDI-TYSSGKEVATLKRKLEQVAQF 75 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~-~~s~~~d~~~L~~K~~ql~~l 75 (166)
++.++.+++.++.|++.|+..+.. +||... .++.++.++.+.+.|.++.+.
T Consensus 80 ~~~~~~~~~~i~~a~~lG~~~v~~-~~g~~~~~~~~~~~~~~~~~~l~~l~~~ 131 (278)
T 1i60_A 80 NEIITEFKGMMETCKTLGVKYVVA-VPLVTEQKIVKEEIKKSSVDVLTELSDI 131 (278)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEE-ECCBCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEE-ecCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345667777777777777777654 565543 344455566666666655443
No 25
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=77.50 E-value=6.8 Score=33.17 Aligned_cols=56 Identities=25% Similarity=0.300 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCC-------------------------------------------CCCCCCCHHHH
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPG-------------------------------------------LDITYSSGKEV 62 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG-------------------------------------------~~~~~s~~~d~ 62 (166)
..++|++|+++|+++||+.+.=+-|. .++++++++-.
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~ 152 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINHTTFDYAAISNEVKSIPNWTHGNTQIKNWSDRWDVTQNSLLGLYDWNTQNTQVQ 152 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSBCCSCTTTSCHHHHTSTTCEEECCBCCCTTCHHHHHHSBBTTBCEECTTSHHHH
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCcccCCccccCccccCCcccccCCCCCCCcCchhcccccccCCCCccccCCHHHH
Confidence 47899999999999999987755441 13455566667
Q ss_pred HHHHHHHHHHHHcCCCeeE
Q psy629 63 ATLKRKLEQVAQFGCRGFA 81 (166)
Q Consensus 63 ~~L~~K~~ql~~lGvr~Fa 81 (166)
+.|+.=+..+.+.||+-|=
T Consensus 153 ~~l~~~~~~w~~~gvDGfR 171 (422)
T 1ua7_A 153 SYLKRFLERALNDGADGFR 171 (422)
T ss_dssp HHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHcCCCEEE
Confidence 7788888888899999886
No 26
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=77.49 E-value=30 Score=28.75 Aligned_cols=115 Identities=14% Similarity=0.241 Sum_probs=69.3
Q ss_pred HCCCeEEEEecC-CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCCCHHHHHHHhhHH--------HH----
Q psy629 39 EQGIDFYYALSP-GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESEMSEADKEVFQSFA--------HA---- 105 (166)
Q Consensus 39 ~~~v~Fv~aisP-G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~~~~d~~~f~~~a--------~a---- 105 (166)
..+|.....|.| |-+|+|+ +.|++.+++-++.+.++|++-|.+-+=+-++....+..+..-..+ .|
T Consensus 87 ~~~ipV~vMIRPRgGdF~Ys-~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~ 165 (287)
T 3iwp_A 87 SVQIPVFVMIRPRGGDFLYS-DREIEVMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFDMV 165 (287)
T ss_dssp TCCSCEEEECCSSSSCSCCC-HHHHHHHHHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTTSCEEECGGGGGC
T ss_pred hcCCCeEEEEecCCCCcccC-HHHHHHHHHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCCCcEEEECchhcc
Confidence 467999999999 8899998 578999999999999999999776662222332211111110000 01
Q ss_pred --HHHHHHHHHHHcCCCCceEccccccccccCCCCCChhHHHHHhhccCCCceEEeeC
Q psy629 106 --QVSVTNEVFEHLGQPKFMLCPTQYCSTRAVPNVKNSEYLNTLGSKLAKEIDIMWTG 161 (166)
Q Consensus 106 --q~~l~n~v~~~l~~~~l~~cPt~Y~~~~~~~~~~~~~Yl~~l~~~L~~~i~i~WTG 161 (166)
+..-+..+.+. |..+++. ++.. ..-...-+-|++|-+....+|.|+=-|
T Consensus 166 ~d~~~Ale~Li~l-GvdrILT-----SG~~-~~a~~Gl~~Lk~Lv~~a~~rI~ImaGG 216 (287)
T 3iwp_A 166 HDPMAALETLLTL-GFERVLT-----SGCD-SSALEGLPLIKRLIEQAKGRIVVMPGG 216 (287)
T ss_dssp SCHHHHHHHHHHH-TCSEEEE-----CTTS-SSTTTTHHHHHHHHHHHTTSSEEEECT
T ss_pred CCHHHHHHHHHHc-CCCEEEC-----CCCC-CChHHhHHHHHHHHHHhCCCCEEEECC
Confidence 22333444443 5555443 2211 111245677888877777788887544
No 27
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=77.45 E-value=25 Score=32.53 Aligned_cols=56 Identities=20% Similarity=0.178 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCC------------------------------CCCCCCHHHHHHHHHHHHHHH-HcCC
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGL------------------------------DITYSSGKEVATLKRKLEQVA-QFGC 77 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~------------------------------~~~~s~~~d~~~L~~K~~ql~-~lGv 77 (166)
-|+.|++.+++.|++|+.=+.|++ -+++++++..+-+..++..+. +.||
T Consensus 393 Glk~lvd~ih~~Glk~GlW~~P~~v~~~S~l~~~hpdw~~~~~~~~~~~~~~~~~LD~t~Pea~~~~~~~l~~l~~~~GI 472 (720)
T 2yfo_A 393 SLAELITRVHEQGMKFGIWIEPEMINEDSDLYRAHPDWAIRIQGKKPVRSRNQLLLDFSRKEVRDCVFDQICVVLDQGKI 472 (720)
T ss_dssp CHHHHHHHHHHTTCEEEEEECTTEECSSSHHHHHCGGGBCCCTTSCCCCBTTBEEBCTTSHHHHHHHHHHHHHHHTTSCC
T ss_pred cHHHHHHHHHHCCCEEEEEecccccCCCCHHHHhCcceEEECCCcCcccCCceEEECCCCHHHHHHHHHHHHHHHHHcCC
Confidence 399999999999999999999852 156778888889999998765 7999
Q ss_pred CeeEEec
Q psy629 78 RGFALLF 84 (166)
Q Consensus 78 r~Failf 84 (166)
+.|=+=|
T Consensus 473 Dy~K~D~ 479 (720)
T 2yfo_A 473 DYVKWDM 479 (720)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 9988443
No 28
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=77.02 E-value=20 Score=31.69 Aligned_cols=116 Identities=14% Similarity=0.209 Sum_probs=74.4
Q ss_pred CCeeeeccCCC----------hhhhh--hh---ccCCCHHHHHHHHHHHHHHHHCCCeEEEEe-cCCCC-----------
Q psy629 1 MDSYLYAPKDD----------YKHRA--YW---RDLYSVEEAEHLTGLISAAKEQGIDFYYAL-SPGLD----------- 53 (166)
Q Consensus 1 mN~YiYAPKdD----------pyhr~--~W---re~Yp~~~l~~l~~L~~~a~~~~v~Fv~ai-sPG~~----------- 53 (166)
||.+..--.|| |.+.. .| +..|+. +++++|++.|+++||+++=-| .||-.
T Consensus 176 lN~lh~HltDdq~wr~ei~~~P~Lt~~Ga~~~~~~~YT~---~di~eiv~yA~~rgI~VIPEID~PGH~~a~l~~~p~L~ 252 (507)
T 2gjx_A 176 LNVFHWHLVDDPSFPYESFTFPELMRKGSYNPVTHIYTA---QDVKEVIEYARLRGIRVLAEFDTPGHTLSWGPGIPGLL 252 (507)
T ss_dssp CCEEEEECCCSSCCCBCCSSCTHHHHHHSSCTTTSCBCH---HHHHHHHHHHHHTTCEEEEECCCSSSCTTTTTTSTTCE
T ss_pred CceEEEEEecccCeeeeccccchhhhccccCCCCCCcCH---HHHHHHHHHHHHcCCEEEECCCCcchHHHHHHhCHhhc
Confidence 68888777777 33322 24 345766 458899999999999999887 34421
Q ss_pred ---------------CCCCCHHHHHHHHHHHHHHHHcCC-CeeEEecCCCCCC---CCHH-----HHHHH-hhHHHHHHH
Q psy629 54 ---------------ITYSSGKEVATLKRKLEQVAQFGC-RGFALLFDDIESE---MSEA-----DKEVF-QSFAHAQVS 108 (166)
Q Consensus 54 ---------------~~~s~~~d~~~L~~K~~ql~~lGv-r~FailfDDi~~~---~~~~-----d~~~f-~~~a~aq~~ 108 (166)
++-++++.++-|.+=|+.+.++=. +.|-|--|.+... .+++ ..+.+ .+...+|..
T Consensus 253 ~~~~~~~~~~~~~~~l~p~~~~t~~fl~~v~~Ev~~lFp~~~iHiGgDE~~~~~w~~~p~~~~~~~~~g~g~~~~~L~~~ 332 (507)
T 2gjx_A 253 TPCYSGSEPSGTFGPVNPSLNNTYEFMSTFFLEVSSVFPDFYLHLGGDEVDFTCWKSNPEIQDFMRKKGFGEDFKQLESF 332 (507)
T ss_dssp EEEESSSSEEEEEEEECTTCHHHHHHHHHHHHHHHHHCCSSEEECCCCSCCSHHHHHCHHHHHHHHHHTCTTCSHHHHHH
T ss_pred ccCCCCCccCCCCCccCCCCHHHHHHHHHHHHHHHHhCCCceEEecCcccccchhhcChHHHHHHHHcCCcchHHHHHHH
Confidence 223356677777777888877533 4567777887632 1111 11222 345678889
Q ss_pred HHHHHHHHcCC
Q psy629 109 VTNEVFEHLGQ 119 (166)
Q Consensus 109 l~n~v~~~l~~ 119 (166)
+++++.+.+..
T Consensus 333 f~~~v~~~v~~ 343 (507)
T 2gjx_A 333 YIQTLLDIVSS 343 (507)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 99999887744
No 29
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=76.91 E-value=6.5 Score=30.26 Aligned_cols=29 Identities=24% Similarity=0.240 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecCCCC
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSPGLD 53 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~ 53 (166)
++.++.+++.++.|++.|++++.. +||..
T Consensus 81 ~~~~~~~~~~i~~a~~lG~~~v~~-~~g~~ 109 (272)
T 2q02_A 81 EEVVKKTEGLLRDAQGVGARALVL-CPLND 109 (272)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEE-CCCCS
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEE-ccCCC
Confidence 345566777777777777776553 56543
No 30
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=76.89 E-value=6.3 Score=30.62 Aligned_cols=56 Identities=16% Similarity=0.215 Sum_probs=34.4
Q ss_pred HHHHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 33 LISAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 33 L~~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
.++.+++.|+.+|.-=++ +..+.+-..+..+.-..=.+.|.+.|.+.++++..+.+
T Consensus 81 ~~~~l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~~~ 138 (288)
T 3gv0_A 81 RVRFMTERNMPFVTHGRSDMGIEHAFHDFDNEAYAYEAVERLAQCGRKRIAVIVPPSR 138 (288)
T ss_dssp HHHHHHHTTCCEEEESCCCSSCCCEEEEECHHHHHHHHHHHHHHTTCCEEEEECCCTT
T ss_pred HHHHHhhCCCCEEEECCcCCCCCCcEEEeCcHHHHHHHHHHHHHCCCCeEEEEcCCcc
Confidence 455666788888865443 22222211123455555567788999999999876543
No 31
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=76.34 E-value=5.9 Score=30.46 Aligned_cols=54 Identities=15% Similarity=0.149 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCCCCCCCCH----HHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGLDITYSSG----KEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~----~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
.++++.+.+++.|+.+. ++|+..++.-.++ +.++.+.+-++....+|++...+.
T Consensus 47 ~~~~~~~~l~~~gl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~ 104 (278)
T 1i60_A 47 SLDDLAEYFQTHHIKPL-ALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKYVVAV 104 (278)
T ss_dssp CHHHHHHHHHTSSCEEE-EEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CHHHHHHHHHHcCCCee-eeccccccccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 45667778889999865 3554444442333 346677777888888999998774
No 32
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=75.43 E-value=4.2 Score=35.26 Aligned_cols=48 Identities=25% Similarity=0.500 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecCCC----CCCCCCHHHHHHHHHHHHHHHHcCCCeeE
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSPGL----DITYSSGKEVATLKRKLEQVAQFGCRGFA 81 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisPG~----~~~~s~~~d~~~L~~K~~ql~~lGvr~Fa 81 (166)
++.+++|++|++.|++.|++.+.=|||.. .+.+++ +..+.++|+..+=
T Consensus 70 ~~~~~~~~~l~~~a~~~g~~vi~DVsp~~~~~Lg~s~~d----------l~~f~~lGi~gLR 121 (385)
T 1x7f_A 70 EEIVAEFKEIINHAKDNNMEVILDVAPAVFDQLGISYSD----------LSFFAELGADGIR 121 (385)
T ss_dssp ----HHHHHHHHHHHHTTCEEEEEECTTCC------CCC----------THHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHH----------HHHHHHcCCCEEE
Confidence 44578999999999999999999999943 344433 3456677887654
No 33
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=75.02 E-value=33 Score=32.08 Aligned_cols=57 Identities=14% Similarity=0.166 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCC------------------------------CCCCCCHHHHHHHHHHHHHHH-HcCC
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGL------------------------------DITYSSGKEVATLKRKLEQVA-QFGC 77 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~------------------------------~~~~s~~~d~~~L~~K~~ql~-~lGv 77 (166)
-|+.|++.+++.|++|+.=+.|++ -+++++++..+-+..++..+. +.||
T Consensus 394 Gl~~lv~~ih~~Glk~glW~~Pe~v~~dS~l~~~hPdw~l~~~~g~~~~~r~~~vLD~tnPevr~~i~~~l~~ll~~~GI 473 (745)
T 3mi6_A 394 GIEHFSQAVHQQGMKFGLWFEPEMVSVDSDLYQQHPDWLIHAPKSTPTPGRHQFVLDMARPEVVDYLFKLMSQMIESANL 473 (745)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTEECSSSSHHHHCGGGBCCCTTCCCCCSSSCEEBCTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHCCCEEEEEEcccccCCCCHHHHhCcceEEEcCCCceeecCCeEEECCCCHHHHHHHHHHHHHHHHHCCC
Confidence 599999999999999999888831 156778888999999998655 8999
Q ss_pred CeeEEecC
Q psy629 78 RGFALLFD 85 (166)
Q Consensus 78 r~FailfD 85 (166)
+.|=+=|.
T Consensus 474 Dy~K~D~n 481 (745)
T 3mi6_A 474 DYIKWDMN 481 (745)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99886553
No 34
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=74.64 E-value=24 Score=27.54 Aligned_cols=60 Identities=8% Similarity=0.046 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCC
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDI 87 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi 87 (166)
+.++.+++.++.|++.|++++. +| |..-..+.++.++.+.+.|.++.+..-+ .-|.+--.
T Consensus 110 ~~~~~~~~~i~~A~~lG~~~v~--~~~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~-v~l~lEn~ 171 (290)
T 2zvr_A 110 KAIERVVKHTEVAGMFGALVII--GLVRGRREGRSYEETEELFIESMKRLLELTEH-AKFVIEPL 171 (290)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEE--SGGGCCCTTSCHHHHHHHHHHHHHHHHHHCSS-CCEEECCC
T ss_pred HHHHHHHHHHHHHHHcCCCEEE--ecCCCCCCCcCHHHHHHHHHHHHHHHHHHhcc-CEEEEEeC
Confidence 3478999999999999999998 55 5522234467788889999998887765 55555443
No 35
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=74.29 E-value=11 Score=31.42 Aligned_cols=56 Identities=9% Similarity=0.096 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCCCCCC-CCHHHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGLDITY-SSGKEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~~~~~-s~~~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
.|++|++.+++.|++|++=+.||.+.|- ..+....-+..-++.+.+.||+.+=+=|
T Consensus 75 Gl~~l~~~ih~~Glk~Giw~~~~~~~~~~~~pg~~~~~~~~~~~~~~wGvdyvK~D~ 131 (362)
T 1uas_A 75 GIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDN 131 (362)
T ss_dssp CHHHHHHHHHHTTCEEEEEEESSSBCTTSSSBCCTTCHHHHHHHHHHHTCCEEEEEC
T ss_pred cHHHHHHHHHHCCCEeEEEeeCCCccccCCCCCchhHHHHHHHHHHHcCCCEEEECc
Confidence 5999999999999999999999976654 1110011123335678899999987544
No 36
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=74.04 E-value=6.5 Score=31.46 Aligned_cols=56 Identities=25% Similarity=0.160 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDD 86 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDD 86 (166)
.+.|+++++.|++.||+ .++|.| .......+.++...|++.++ +.|-..+++.+|=
T Consensus 157 ~~~l~~l~~~a~~~Gv~-~l~lE~~~~~~~~~~t~~~~~~l~~~v~---~~~~~~vg~~lD~ 214 (316)
T 3qxb_A 157 RDMWIELAAYAKRQGLS-MLYVEPVPLATEFPSSAADAARLMADLD---GRTEIPVRLLVDW 214 (316)
T ss_dssp HHHHHHHHHHHHHHTCC-EEEECCCSCTTBSSCSHHHHHHHHHHHT---TTSSSCEEEEEEH
T ss_pred HHHHHHHHHHHHhcCCe-EEEEEecCCccccCCCHHHHHHHHHHHh---ccCCCCEEEEEEc
Confidence 57899999999999998 245655 43322234455555554432 2366779998874
No 37
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=73.92 E-value=11 Score=32.25 Aligned_cols=61 Identities=18% Similarity=0.200 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCC--------------------------------------------------CCCCC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPG--------------------------------------------------LDITY 56 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG--------------------------------------------------~~~~~ 56 (166)
.++|++|+++|+++||+.+.=+-+. -++++
T Consensus 96 ~~df~~lv~~~h~~Gi~VilD~V~NH~~~~~~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~ 175 (475)
T 2z1k_A 96 NEALRHLLEVAHAHGVRVILDGVFNHTGRGFFAFQHLMENGEQSPYRDWYHVKGFPLKAYTAHPNYEAWWGNPELPKLKV 175 (475)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHHHHHHHHHGGGCTTGGGBCBCSSSCCTTSSSCSBCBGGGCTTSBBBCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccCCCHHHHHHHhcCCCCCCcceeecCCCCCcCCCCCCCccccCCCCCcCcccc
Confidence 6899999999999999988765220 04556
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCC
Q psy629 57 SSGKEVATLKRKLEQVAQFGCRGFALLFDDIES 89 (166)
Q Consensus 57 s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~ 89 (166)
++++-.+.|+.-+....+.||+-|= ||-+..
T Consensus 176 ~np~v~~~i~~~~~~w~~~gvDGfR--~D~~~~ 206 (475)
T 2z1k_A 176 ETPAVREYLLAVAEHWIRFGVDGWR--LDVPNE 206 (475)
T ss_dssp TSHHHHHHHHHHHHHHHHHTCCEEE--ESSGGG
T ss_pred CCHHHHHHHHHHHHHHHHCCCCEEe--eccccc
Confidence 6667777788877777799999988 566553
No 38
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=73.88 E-value=29 Score=26.82 Aligned_cols=56 Identities=16% Similarity=0.173 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHCCCeEEEEecCCCCCCCCC--HHHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 28 EHLTGLISAAKEQGIDFYYALSPGLDITYSS--GKEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~--~~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
..++++.+.++++|+... +++|..+..... ++.++.+.+-++....+|++...+.-
T Consensus 48 ~~~~~~~~~l~~~gl~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~ 105 (286)
T 3dx5_A 48 ETTERELNCLKDKTLEIT-MISDYLDISLSADFEKTIEKCEQLAILANWFKTNKIRTFA 105 (286)
T ss_dssp HHHHHHHHHTGGGTCCEE-EEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTCCEEEECS
T ss_pred HHHHHHHHHHHHcCCeEE-EEecCCCCCCchhHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 567788888899999965 677755432222 45678888889999999999998753
No 39
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*
Probab=73.12 E-value=57 Score=29.90 Aligned_cols=61 Identities=10% Similarity=0.116 Sum_probs=47.5
Q ss_pred cCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCC-----------------------------------CCCCCHHHHHH
Q psy629 20 DLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLD-----------------------------------ITYSSGKEVAT 64 (166)
Q Consensus 20 e~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~-----------------------------------~~~s~~~d~~~ 64 (166)
+.||. .++|++.-++.|++++.-|.|+.. .+|++++..+=
T Consensus 227 ~~FPd-----p~~mv~~Lh~~G~k~~l~i~P~I~~~~~y~~y~e~~~~fvk~~~G~~~~g~~W~g~~~~~Dftnp~a~~w 301 (693)
T 2g3m_A 227 YRFPE-----PKKLIDELHKRNVKLITIVDHGIRVDQNYSPFLSGMGKFCEIESGELFVGKMWPGTTVYPDFFREDTREW 301 (693)
T ss_dssp TTCSC-----HHHHHHHHHHTTCEEEEEECSCEECCTTCHHHHHHTTSBCEETTSSBCEEEETTEEEECBCTTSHHHHHH
T ss_pred hhCCC-----HHHHHHHHHHCCCEEEEEecCcccCCCCcHHHHHHHhheEECCCCCEEEEEeCCCCeeeeCCCCHHHHHH
Confidence 45665 788999999999999999999532 24555666677
Q ss_pred HHHHHHHHHHcCCCeeEEecC
Q psy629 65 LKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 65 L~~K~~ql~~lGvr~FailfD 85 (166)
...+++.+.+.||+.|-+=+.
T Consensus 302 w~~~~~~l~~~GiDg~w~Dmn 322 (693)
T 2g3m_A 302 WAGLISEWLSQGVDGIWLDMN 322 (693)
T ss_dssp HHHHHHHHHTTTCCEEEECST
T ss_pred HHHHHHHHHhcCCcEEEEecC
Confidence 788888899999998886443
No 40
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=72.68 E-value=13 Score=31.91 Aligned_cols=62 Identities=23% Similarity=0.320 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecC--------------------------------------------------------
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSP-------------------------------------------------------- 50 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisP-------------------------------------------------------- 50 (166)
+++|++|+++|+++||+.+.=+-|
T Consensus 81 ~~d~~~Lv~~aH~~Gi~VilD~V~NH~s~~~~~f~~~~~~~~~~y~d~y~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 160 (488)
T 1wza_A 81 LEDFHKLVEAAHQRGIKVIIDLPINHTSERHPWFLKASRDKNSEYRDYYVWAGPDTDTKETKLDGGRVWHYSPTGMYYGY 160 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCSBCCTTSHHHHHHHTCTTCTTGGGBCBCCSCCCCCBCSSSCBCSEEEETTEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccccccCccHhhhhhhcCCCCCCcCeeecCCCCCCCCCccccCCCcccccCCceEEec
Confidence 689999999999999998865422
Q ss_pred ---C-CCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCC
Q psy629 51 ---G-LDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESE 90 (166)
Q Consensus 51 ---G-~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~ 90 (166)
+ .++++++++-.+.|+.=+....+.||+-|= +|-+..-
T Consensus 161 f~~~~pdln~~np~Vr~~i~~~~~~Wl~~gvDGfR--~Da~~~i 202 (488)
T 1wza_A 161 FWSGMPDLNYNNPEVQEKVIGIAKYWLKQGVDGFR--LDGAMHI 202 (488)
T ss_dssp SCTTSCBBCTTSHHHHHHHHHHHHHHHHTTCCEEE--EECCCTT
T ss_pred cCCCCcccccCCHHHHHHHHHHHHHHHHcCCCChh--HhhHhhh
Confidence 0 145566677778888888888888999887 6766643
No 41
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=72.59 E-value=17 Score=30.02 Aligned_cols=59 Identities=3% Similarity=-0.005 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHCCCeEE-EEecCCCCCCCCCHHHH-HHHHHHHHHHHHcCCCeeEEec
Q psy629 24 VEEAEHLTGLISAAKEQGIDFY-YALSPGLDITYSSGKEV-ATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv-~aisPG~~~~~s~~~d~-~~L~~K~~ql~~lGvr~Failf 84 (166)
.++++.+++++++|++.|+.|+ +.+.+|..+.-+. +- +.+........++|++.+.+-.
T Consensus 138 ~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~--~~~~~v~~aa~~a~~lGaD~iKv~~ 198 (304)
T 1to3_A 138 QQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKF--DREQAIIDAAKELGDSGADLYKVEM 198 (304)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCC--CHHHHHHHHHHHHTTSSCSEEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCC--ChhHHHHHHHHHHHHcCCCEEEeCC
Confidence 6778999999999999999864 5556677653221 22 4555568888899999887654
No 42
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=72.54 E-value=14 Score=28.60 Aligned_cols=48 Identities=13% Similarity=-0.026 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecCCCCC-CCCCHHHHHHHHHHHHHH
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSPGLDI-TYSSGKEVATLKRKLEQV 72 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~-~~s~~~d~~~L~~K~~ql 72 (166)
++.++.+++.++.|++.|++.+.. +||..- ...+++..+.+.+.|..+
T Consensus 80 ~~~~~~~~~~i~~A~~lG~~~v~~-~~g~~~~~~~~~~~~~~~~~~l~~l 128 (286)
T 3dx5_A 80 EKTIEKCEQLAILANWFKTNKIRT-FAGQKGSADFSQQERQEYVNRIRMI 128 (286)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEE-CSCSSCGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEE-cCCCCCcccCcHHHHHHHHHHHHHH
Confidence 444556666666666666665532 444321 122333444444444433
No 43
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13
Probab=72.28 E-value=9.2 Score=34.41 Aligned_cols=57 Identities=16% Similarity=0.111 Sum_probs=48.3
Q ss_pred HHHHHHHHHHCCCeEEEEecCCC----------------------------------CCCCCCHHHHHHHHHHHHHHHHc
Q psy629 30 LTGLISAAKEQGIDFYYALSPGL----------------------------------DITYSSGKEVATLKRKLEQVAQF 75 (166)
Q Consensus 30 l~~L~~~a~~~~v~Fv~aisPG~----------------------------------~~~~s~~~d~~~L~~K~~ql~~l 75 (166)
++.|++..++.|++|+.=+.||+ -+++++++..+-+...++.+.+.
T Consensus 252 lk~lvd~lh~~Glk~Giw~~P~~v~~~S~ly~~~pdw~v~~~G~~~~~~~~W~~~~~~lD~t~P~a~~~~~~~~~~~~~~ 331 (564)
T 1zy9_A 252 VEEMAKVIAENGFIPGIWTAPFSVSETSDVFNEHPDWVVKENGEPKMAYRNWNKKIYALDLSKDEVLNWLFDLFSSLRKM 331 (564)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTEEETTCHHHHHCGGGBCEETTEECEEEEETTEEEEEBCTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCEEEEEeCCCccCCCChhHHhCCCeEEecCCeeeeeecccCCceeecCCCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999972 14567778888899999999999
Q ss_pred CCCeeEEecCCCC
Q psy629 76 GCRGFALLFDDIE 88 (166)
Q Consensus 76 Gvr~FailfDDi~ 88 (166)
||+.|= +|...
T Consensus 332 GVD~iK--~D~~~ 342 (564)
T 1zy9_A 332 GYRYFK--IDFLF 342 (564)
T ss_dssp TCCEEE--ECCGG
T ss_pred CCCEEE--EcCCC
Confidence 999887 66654
No 44
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=72.08 E-value=12 Score=33.53 Aligned_cols=24 Identities=17% Similarity=0.068 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.+.|++||++|+++||+.+.=+-|
T Consensus 285 ~~df~~LV~~aH~~GI~VIlD~V~ 308 (645)
T 4aef_A 285 DRAFVDLLSELKRFDIKVILDGVF 308 (645)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHhhhcCCEEEEEecc
Confidence 578999999999999999987744
No 45
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=71.95 E-value=9.8 Score=36.20 Aligned_cols=65 Identities=11% Similarity=0.202 Sum_probs=45.0
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEec-CCC-----------------------------------------------
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALS-PGL----------------------------------------------- 52 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~ais-PG~----------------------------------------------- 52 (166)
.|+.+ ++++|++.|+++||+.|=-|- ||-
T Consensus 396 ~YT~~---direIv~YA~~rgI~VIPEID~PGH~~a~l~a~~~~YpeL~~~g~~~~~~~~~~~dp~d~s~~~svq~y~~~ 472 (858)
T 1c7s_A 396 FFSRQ---DYIDIIKYAQARQIEVIPEIDMPAHARAAVVSMEARYKKLHAAGKEQEANEFRLVDQTDTSNTTSVQFFNRQ 472 (858)
T ss_dssp CBCHH---HHHHHHHHHHTTTCEEEEEEEESSSCHHHHHHHHHHHHHHHHTTCHHHHHHTCCCCTTCCCCCCCTTSCCGG
T ss_pred CCCHH---HHHHHHHHHHHcCCEEEEcccccchHHHHHHhccccChhhhhccCccccccccccCcccccccceecccCCc
Confidence 46655 578899999999999986651 221
Q ss_pred C-CCCCCHHHHHHHHHHHHHHHHc------CCCeeEEecCCCC
Q psy629 53 D-ITYSSGKEVATLKRKLEQVAQF------GCRGFALLFDDIE 88 (166)
Q Consensus 53 ~-~~~s~~~d~~~L~~K~~ql~~l------Gvr~FailfDDi~ 88 (166)
. ++-++++-++-|.+=|+.+.++ --+.|=|--|.+.
T Consensus 473 ~~L~p~~~~ty~Fl~~vl~Ev~~lF~~~~~Ps~~iHIGGDEv~ 515 (858)
T 1c7s_A 473 SYLNPCLDSSQRFVDKVIGEIAQMHKEAGQPIKTWHFGGAEAK 515 (858)
T ss_dssp GSCCTTCHHHHHHHHHHHHHHHHHHHHTTCCCSCEEEECCCCS
T ss_pred ceecCCChHHHHHHHHHHHHHHHhhhccCCCCCeEEecCcccc
Confidence 0 4445666677777777777665 3467888899987
No 46
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=71.46 E-value=31 Score=26.24 Aligned_cols=55 Identities=13% Similarity=0.193 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 28 EHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
..++++.+.+++.|+.+. ++|....++...++.++.+.+-++....+|++...+.
T Consensus 51 ~~~~~~~~~~~~~gl~~~-~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~ 105 (272)
T 2q02_A 51 LNYNQVRNLAEKYGLEIV-TINAVYPFNQLTEEVVKKTEGLLRDAQGVGARALVLC 105 (272)
T ss_dssp CCHHHHHHHHHHTTCEEE-EEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSEEEEC
T ss_pred cCHHHHHHHHHHcCCeEE-echhhhccCCcHHHHHHHHHHHHHHHHHhCCCEEEEc
Confidence 345666777788999863 4454333333345667888888999999999998763
No 47
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=71.17 E-value=3.4 Score=34.59 Aligned_cols=60 Identities=22% Similarity=0.195 Sum_probs=37.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCCCHHHHHHHh--hHHHHHHHHHHHHHHH
Q psy629 55 TYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESEMSEADKEVFQ--SFAHAQVSVTNEVFEH 116 (166)
Q Consensus 55 ~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~~~~d~~~f~--~~a~aq~~l~n~v~~~ 116 (166)
++++.+=.+.|.++++++.+.|++ ||++|.+++-...+....+. ..+..++.++..|.+.
T Consensus 114 Di~~~~w~~i~~~rl~~~~~kG~D--GvflDnvD~y~~~~~~~g~~~~~~~~~~~~~i~~La~~ 175 (309)
T 2aam_A 114 KYWYNEWKEIVFSYLDRVIDQGFK--GIYLDRIDSFEYWAQEGVISRRSAARKMINFVLEIAEY 175 (309)
T ss_dssp CTTSHHHHHHHHHHHHHHHHTTCS--EEEEECTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHH
T ss_pred ecCCHHHHHHHHHHHHHHHHcCCC--eEeecccchhhhccccCCcchhhhHHHHHHHHHHHHHH
Confidence 444555566778899999999999 45699988432111111121 2456777888887543
No 48
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=71.04 E-value=15 Score=31.16 Aligned_cols=60 Identities=23% Similarity=0.437 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCC-------------------------------------------------------
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPG------------------------------------------------------- 51 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG------------------------------------------------------- 51 (166)
+++|++|+++|+++||+.+.=+-|.
T Consensus 69 ~~df~~lv~~aH~~Gi~VilD~V~NH~~~~~~~f~~~~~~~~~y~d~y~~~~~~~~~~~~~~~~~~~~w~~~~~~~~y~~ 148 (441)
T 1lwj_A 69 EREFKEMIEAFHDSGIKVVLDLPIHHTGFLHTWFQKALKGDPHYRDYYVWANKETDLDERREWDGEKIWHPLEDGRFYRG 148 (441)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCCTTCHHHHHHHTTCHHHHTTBCBCCTTSCTTCBCSSSCCBCEEECTTSCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCcccCchHHHHHHhccCCCCcceeeecCCCCCCcccccCCCccccccccCCceEEc
Confidence 6899999999999999988654320
Q ss_pred ------CCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 52 ------LDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 52 ------~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
.++++++++-.+.|+.-+....+.||+-|= +|-+.
T Consensus 149 ~f~~~~pdln~~np~V~~~l~~~~~~wl~~gvDGfR--~D~~~ 189 (441)
T 1lwj_A 149 LFGPFSPDLNYDNPQVFDEMKRLVLHLLDMGVDGFR--FDAAK 189 (441)
T ss_dssp TTCTTSCBBCSSSHHHHHHHHHHHHHHHTTTCCEEE--ETTGG
T ss_pred ccCCCCCccCCCCHHHHHHHHHHHHHHHhCCCCEEE--EeChh
Confidence 145566677778888888888888999887 44433
No 49
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=70.92 E-value=13 Score=28.81 Aligned_cols=56 Identities=11% Similarity=0.060 Sum_probs=34.7
Q ss_pred HHHHHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCC
Q psy629 32 GLISAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDI 87 (166)
Q Consensus 32 ~L~~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi 87 (166)
+.++.+++.|+.+|.-=++ +..+.+=..+..+....=.+.|.+.|.|.++++...-
T Consensus 79 ~~~~~l~~~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~~~~ 136 (294)
T 3qk7_A 79 FRLQYLQKQNFPFLALGRSHLPKPYAWFDFDNHAGASLAVKRLLELGHQRIAFVSTDA 136 (294)
T ss_dssp HHHHHHHHTTCCEEEESCCCCSSCCEEEEECHHHHHHHHHHHHHHTTCCCEEEEEESS
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCCCEEEcChHHHHHHHHHHHHHCCCceEEEEeCCc
Confidence 3455667789998876553 2222211112345555556778889999999987654
No 50
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=70.90 E-value=11 Score=29.22 Aligned_cols=57 Identities=11% Similarity=0.014 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHH----cCCCeeEE
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQ----FGCRGFAL 82 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~----lGvr~Fai 82 (166)
++.++.+++.++.|++.|++.+. ++||..-..+.++.++.+.+.|.++.+ .||+ ++|
T Consensus 89 ~~~~~~~~~~i~~A~~lGa~~v~-~~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~l 149 (269)
T 3ngf_A 89 QEFRDNVDIALHYALALDCRTLH-AMSGITEGLDRKACEETFIENFRYAADKLAPHGIT-VLV 149 (269)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEE-CCBCBCTTSCHHHHHHHHHHHHHHHHHHHGGGTCE-EEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEE-EccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCE-EEE
Confidence 35578999999999999999875 678832233445667777777777665 4775 443
No 51
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=70.80 E-value=13 Score=28.36 Aligned_cols=53 Identities=8% Similarity=0.049 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCC---CCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGL---DITYSSGKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~---~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
.+.|+++++.|++.||++.+=-++.. ...+.+.++...|++++ |-..+++.+|
T Consensus 123 ~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~g~~~D 178 (260)
T 1k77_A 123 IDNIRYAADRFAPHGKRILVEALSPGVKPHYLFSSQYQALAIVEEV------ARDNVFIQLD 178 (260)
T ss_dssp HHHHHHHHHHHGGGTCEEEECCCCTTTSTTBSCCSHHHHHHHHHHH------CCTTEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCCccCCCcCccCCHHHHHHHHHHh------CCCCEEEEee
Confidence 46777888888888877544333211 11223444544444433 3344555554
No 52
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=70.57 E-value=50 Score=30.40 Aligned_cols=57 Identities=18% Similarity=0.216 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHCCCeEEEEecCCC------------------------------CCCCCCHHHHHHHHHHHHHHHH-cC
Q psy629 28 EHLTGLISAAKEQGIDFYYALSPGL------------------------------DITYSSGKEVATLKRKLEQVAQ-FG 76 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~aisPG~------------------------------~~~~s~~~d~~~L~~K~~ql~~-lG 76 (166)
.-|+.|++..++.|++|+.=+.||+ -+++++++..+-+.+++..+.+ -|
T Consensus 392 ~Glk~Lad~vh~~GmkfGLW~epe~v~~~S~l~~~hPdw~~~~~~~~~~~~r~q~~LD~~~P~v~~y~~~~i~~ll~~~G 471 (729)
T 4fnq_A 392 NGLDGLAKQVNELGMQFGLWVEPEMVSPNSELYRKHPDWCLHVPNRPRSEGRNQLVLDYSREDVCDYIIETISNVLASAP 471 (729)
T ss_dssp THHHHHHHHHHHTTCEEEEEECTTEECSSSHHHHHCGGGBCCCTTSCCCCBTTBEEBCTTSHHHHHHHHHHHHHHHTTTT
T ss_pred ccHHHHHHHHHHCCCEEEEEeeccccCCCcHHHHhCchheeccCccCCccCCccccccCCChhHHHHHHHHHHHHHHHCC
Confidence 3699999999999999999999974 1367778888888899888765 79
Q ss_pred CCeeEEec
Q psy629 77 CRGFALLF 84 (166)
Q Consensus 77 vr~Failf 84 (166)
|+-|=+=+
T Consensus 472 idYiK~D~ 479 (729)
T 4fnq_A 472 ITYVKWDM 479 (729)
T ss_dssp CCEEEEEC
T ss_pred CCEEEEcC
Confidence 99887544
No 53
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=70.53 E-value=35 Score=26.41 Aligned_cols=56 Identities=16% Similarity=0.156 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHCCCeEEEEecCCCCCCCCC--H----HHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 28 EHLTGLISAAKEQGIDFYYALSPGLDITYSS--G----KEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~--~----~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
+.++++.+.++++|+.+..+..|..++++.+ + +.++.+.+-++....+|++...+.
T Consensus 47 ~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~ 108 (294)
T 3vni_A 47 IQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGA 108 (294)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCeeecc
Confidence 4556677778899999988666754444443 2 345677778888889999998753
No 54
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=70.18 E-value=16 Score=31.21 Aligned_cols=24 Identities=29% Similarity=0.407 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.++|++||++|+++||+.+.=+-|
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~ 120 (478)
T 2guy_A 97 ADDLKALSSALHERGMYLMVDVVA 120 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECc
Confidence 689999999999999998876544
No 55
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A*
Probab=69.25 E-value=11 Score=34.07 Aligned_cols=34 Identities=18% Similarity=0.279 Sum_probs=27.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 53 DITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 53 ~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
++++++++-.+.|+.=+..+.++||+-|= ||=+.
T Consensus 259 DLn~~np~V~~~i~~~l~~w~~~GvDGfR--lDa~~ 292 (655)
T 3ucq_A 259 DLNWANPDVFLEFVDIILYLANRGVEVFR--LDAIA 292 (655)
T ss_dssp EBCTTSHHHHHHHHHHHHHHHTTTCCEEE--ETTGG
T ss_pred ccCCCCHHHHHHHHHHHHHHHHCCCCEEE--Eechh
Confidence 45666778888999999999999999998 56554
No 56
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=68.94 E-value=4.4 Score=34.95 Aligned_cols=47 Identities=21% Similarity=0.337 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecC----CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeE
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALSP----GLDITYSSGKEVATLKRKLEQVAQFGCRGFA 81 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~aisP----G~~~~~s~~~d~~~L~~K~~ql~~lGvr~Fa 81 (166)
+.+++|++|++.|++.|++.+.=||| -+.+.+++ +..+.++|+..+=
T Consensus 47 ~~~~~~~~l~~~a~~~g~~vi~DIsp~~l~~Lg~s~~d----------l~~~~~lGi~glR 97 (372)
T 2p0o_A 47 LYRQRLTDLGAIAKAEKMKIMVDISGEALKRAGFSFDE----------LEPLIELGVTGLR 97 (372)
T ss_dssp CHHHHHHHHHHHHHHHTCEEEEEECHHHHHTTTCBTTB----------CHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHH----------HHHHHHcCCCEEE
Confidence 35789999999999999999999999 33444432 3456677887554
No 57
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=68.84 E-value=10 Score=31.65 Aligned_cols=95 Identities=14% Similarity=0.048 Sum_probs=58.7
Q ss_pred eeccCCChhhhhhhccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 5 LYAPKDDYKHRAYWRDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 5 iYAPKdDpyhr~~Wre~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
++.|=.|...+.+.+-. .++-++.+++.++.|++.|..+.|+.- +.+..+.+.+.+-++++.++|++.++ +
T Consensus 100 i~~s~Sd~~~~~~l~~s-~~e~l~~~~~~v~~a~~~g~~v~f~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~--l 170 (325)
T 3eeg_A 100 TGIGSSDIHIEHKLRST-RENILEMAVAAVKQAKKVVHEVEFFCE------DAGRADQAFLARMVEAVIEAGADVVN--I 170 (325)
T ss_dssp EEEECSHHHHC----CC-CTTGGGTTHHHHHHHHTTSSEEEEEEE------TGGGSCHHHHHHHHHHHHHHTCSEEE--C
T ss_pred EEecccHHHHHHHhCCC-HHHHHHHHHHHHHHHHHCCCEEEEEcc------ccccchHHHHHHHHHHHHhcCCCEEE--e
Confidence 34444444434444332 455678899999999999999877642 22234567777888888999999765 6
Q ss_pred CCCCCCCCHHHHHHHhhHHHHHHHHHHHHHHHcC
Q psy629 85 DDIESEMSEADKEVFQSFAHAQVSVTNEVFEHLG 118 (166)
Q Consensus 85 DDi~~~~~~~d~~~f~~~a~aq~~l~n~v~~~l~ 118 (166)
=|.-+...+.+ -.+++..+.+.++
T Consensus 171 ~DT~G~~~P~~----------v~~lv~~l~~~~~ 194 (325)
T 3eeg_A 171 PDTTGYMLPWQ----------YGERIKYLMDNVS 194 (325)
T ss_dssp CBSSSCCCHHH----------HHHHHHHHHHHCS
T ss_pred cCccCCcCHHH----------HHHHHHHHHHhCC
Confidence 66666555432 2244555555555
No 58
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=68.76 E-value=4.6 Score=31.46 Aligned_cols=22 Identities=27% Similarity=0.617 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHCCCeEEEEecC
Q psy629 29 HLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.++||++.-+++|++.-|||||
T Consensus 42 ~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 42 ALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHCCCeEEEEecc
Confidence 6899999999999999999999
No 59
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=68.65 E-value=22 Score=27.62 Aligned_cols=53 Identities=13% Similarity=0.297 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCCCC-CCCCHHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGLDI-TYSSGKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~~~-~~s~~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
.+.|+++++.|++.||++.+=-+++..- ...+.++...|++.+ |-..+++.+|
T Consensus 131 ~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v------~~~~vg~~~D 184 (294)
T 3vni_A 131 VESVREVAKVAEACGVDFCLEVLNRFENYLINTAQEGVDFVKQV------DHNNVKVMLD 184 (294)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHHHHHHHHHH------CCTTEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHHHc------CCCCEEEEEE
Confidence 5789999999999999876665554322 223556666665543 5566888876
No 60
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=68.30 E-value=11 Score=29.35 Aligned_cols=51 Identities=20% Similarity=0.223 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
.+.|+++++.|++.||++.+=-+|+.- ..+.+++..|++ .+|-..+++.+|
T Consensus 140 ~~~l~~l~~~a~~~gv~l~lE~~~~~~--~~~~~~~~~l~~------~~~~~~vg~~~D 190 (301)
T 3cny_A 140 CKGLNHYGEIAAKYGLKVAYHHHMGTG--IQTKEETDRLMA------NTDPKLVGLLYD 190 (301)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSS--SCSHHHHHHHHH------TSCTTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEecCCCcc--cCCHHHHHHHHH------hCCccceeEEec
Confidence 578999999999999987776666522 234455555543 346567888886
No 61
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=67.89 E-value=6.3 Score=30.56 Aligned_cols=27 Identities=19% Similarity=0.388 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCC
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLD 53 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~ 53 (166)
.++.+++.++.|.+.|+..+ .+|||..
T Consensus 86 ~~~~~~~~i~~a~~lGa~~v-v~h~g~~ 112 (270)
T 3aam_A 86 SVASLADDLEKAALLGVEYV-VVHPGSG 112 (270)
T ss_dssp HHHHHHHHHHHHHHHTCCEE-EECCCBS
T ss_pred HHHHHHHHHHHHHHcCCCEE-EECCCCC
Confidence 45667777777777777765 3677653
No 62
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=67.61 E-value=21 Score=32.35 Aligned_cols=58 Identities=16% Similarity=0.181 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecCC--------------------------------------CCCCCCCHHHHHHHH
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALSPG--------------------------------------LDITYSSGKEVATLK 66 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~aisPG--------------------------------------~~~~~s~~~d~~~L~ 66 (166)
..+++|++||++|+++||+.+.=+-+. .++++++.+-.+.|+
T Consensus 239 ~~~~d~~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ln~~~p~v~~~i~ 318 (657)
T 2wsk_A 239 TALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYAS 318 (657)
T ss_dssp GHHHHHHHHHHHHHHTTCEEEEEECCSCCTTCSTTSBCCSHHHHHHHHHBCBCTTSSBCCSSSSSCCBCTTSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCEEEEEEeecccccccccCccccccCCCCccceEECCCCCeeCCCCcCCcccCCCHHHHHHHH
Confidence 468999999999999999988765441 245666677777888
Q ss_pred HHHHHHHH-cCCCeeEE
Q psy629 67 RKLEQVAQ-FGCRGFAL 82 (166)
Q Consensus 67 ~K~~ql~~-lGvr~Fai 82 (166)
.=+....+ .||+-|=+
T Consensus 319 d~~~~W~~e~gvDGfR~ 335 (657)
T 2wsk_A 319 ACLRYWVETCHVDGFRF 335 (657)
T ss_dssp HHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHhCCcEEEE
Confidence 88887777 99999874
No 63
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=67.53 E-value=28 Score=29.50 Aligned_cols=80 Identities=11% Similarity=0.032 Sum_probs=54.0
Q ss_pred eeccCCChhhhhhhccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 5 LYAPKDDYKHRAYWRDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 5 iYAPKdDpyhr~~Wre~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
+|.|=.|...+.+.+.. .++-++.+.+.++.|++.|.++.|+.- +++..+.+.+.+-++++.++|++.+. +
T Consensus 106 if~~~Sd~h~~~~l~~s-~~e~l~~~~~~v~~a~~~g~~v~~~~e------d~~r~~~~~~~~~~~~~~~~Ga~~i~--l 176 (370)
T 3rmj_A 106 TFIATSPIHMEYKLKMK-PKQVIEAAVKAVKIAREYTDDVEFSCE------DALRSEIDFLAEICGAVIEAGATTIN--I 176 (370)
T ss_dssp EEEECSHHHHHHTTCCC-HHHHHHHHHHHHHHHTTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHHTCCEEE--E
T ss_pred EEecCcHHHHHHHhCCC-HHHHHHHHHHHHHHHHHcCCEEEEecC------CCCccCHHHHHHHHHHHHHcCCCEEE--e
Confidence 44555554444555432 455688999999999999998776642 22334567888888999999999866 4
Q ss_pred CCCCCCCCH
Q psy629 85 DDIESEMSE 93 (166)
Q Consensus 85 DDi~~~~~~ 93 (166)
=|.-+...+
T Consensus 177 ~DT~G~~~P 185 (370)
T 3rmj_A 177 PDTVGYSIP 185 (370)
T ss_dssp ECSSSCCCH
T ss_pred cCccCCcCH
Confidence 455544443
No 64
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=67.48 E-value=15 Score=28.24 Aligned_cols=54 Identities=13% Similarity=0.075 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCC---C--CCC-CCCHHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPG---L--DIT-YSSGKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG---~--~~~-~s~~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
-.+.|+++++.|++.||++.+=-++. . ..+ ..+.++...|++. +|-..+++.+|
T Consensus 120 ~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~~~~~~l~~~------v~~~~vg~~~D 179 (281)
T 3u0h_A 120 LARRIRQVAVELLPLGMRVGLEYVGPHHLRHRRYPFVQSLADLKTFWEA------IGAPNVGALVD 179 (281)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEECCCCGGGCCSSEECCCSHHHHHHHHHH------HCCTTEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeccccccccccccccCCHHHHHHHHHH------cCCCCeeEEee
Confidence 35789999999999999877766542 1 111 2344555555443 36667888886
No 65
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=67.33 E-value=23 Score=27.96 Aligned_cols=53 Identities=15% Similarity=0.343 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCCCC-CCCCHHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGLDI-TYSSGKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~~~-~~s~~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
.+.|+++++.|++.||.+++=-+++... ...+.+++..|++++ |-..+++.+|
T Consensus 150 ~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v------~~~~vg~~~D 203 (309)
T 2hk0_A 150 VEGINGIADFANDLGINLCIEVLNRFENHVLNTAAEGVAFVKDV------GKNNVKVMLD 203 (309)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHHHHHHHHHH------TCTTEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEeecccccccccCCHHHHHHHHHHc------CCCCeEEEEe
Confidence 5789999999999999877665543222 223455566665443 5566788775
No 66
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=67.33 E-value=5.1 Score=31.31 Aligned_cols=52 Identities=23% Similarity=0.426 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCe-eEEecCCCCCCC
Q psy629 29 HLTGLISAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRG-FALLFDDIESEM 91 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~-FailfDDi~~~~ 91 (166)
.++||++.-+++|++.-||||| |- + +-.++.|+ .++||-. .-+=+|+|..+.
T Consensus 41 ~v~el~~~L~~~G~~V~faIHPVAGR-M----PGhMNVLL------AEA~VPYd~v~EMdeIN~df 95 (184)
T 1d4o_A 41 PIADLVKMLSEQGKKVRFGIHPVAGR-M----PGQLNVLL------AEAGVPYDIVLEMDEINHDF 95 (184)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTCSS-S----TTHHHHHH------HHHTCCGGGEEEHHHHGGGG
T ss_pred HHHHHHHHHHHCCCeEEEEecccccc-C----CCcceEEE------EEecCCHHHHHhHHHHhhhh
Confidence 6889999999999999999999 32 1 23455554 3556654 233355665443
No 67
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=67.20 E-value=52 Score=28.86 Aligned_cols=61 Identities=16% Similarity=0.193 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCCCHH
Q psy629 28 EHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESEMSEA 94 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~~~~ 94 (166)
+.+++.++.+++.|......||.-.+-.+ +.+.+.+-++++.++|++.++ +=|.-|.+.+.
T Consensus 127 ~ni~~~i~~ak~~G~~v~~~i~~~~~~~~----~~e~~~~~a~~l~~~Gad~I~--l~DT~G~~~P~ 187 (464)
T 2nx9_A 127 RNMQQALQAVKKMGAHAQGTLCYTTSPVH----NLQTWVDVAQQLAELGVDSIA--LKDMAGILTPY 187 (464)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCCCTTC----CHHHHHHHHHHHHHTTCSEEE--EEETTSCCCHH
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeeeCCCC----CHHHHHHHHHHHHHCCCCEEE--EcCCCCCcCHH
Confidence 67889999999999999888876443333 456778888889999999877 45666655543
No 68
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=67.16 E-value=5.1 Score=31.83 Aligned_cols=22 Identities=27% Similarity=0.617 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHCCCeEEEEecC
Q psy629 29 HLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.++||++.-+++|++.-|||||
T Consensus 65 ~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 65 ALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp HHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHcCCeEEEEecc
Confidence 5699999999999999999999
No 69
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=67.13 E-value=18 Score=28.08 Aligned_cols=53 Identities=17% Similarity=0.120 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHH----cCCC
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQ----FGCR 78 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~----lGvr 78 (166)
++.++.+++.++.|++.|++.+. ++||..-. ..++.++.+.+.|..+.+ .||+
T Consensus 98 ~~~~~~~~~~i~~a~~lG~~~v~-~~~G~~~~-~~~~~~~~~~~~l~~l~~~a~~~Gv~ 154 (290)
T 3tva_A 98 ASRVAEMKEISDFASWVGCPAIG-LHIGFVPE-SSSPDYSELVRVTQDLLTHAANHGQA 154 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEE-ECCCCCCC-TTSHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEE-EcCCCCcc-cchHHHHHHHHHHHHHHHHHHHcCCE
Confidence 45678888888888888888775 56663211 134555666655555543 4664
No 70
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=66.89 E-value=5.2 Score=31.88 Aligned_cols=52 Identities=23% Similarity=0.426 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCe-eEEecCCCCCCC
Q psy629 29 HLTGLISAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRG-FALLFDDIESEM 91 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~-FailfDDi~~~~ 91 (166)
.++||++.-+++|++.-||||| |- + +-..+.|+ .++||-. .-+=+|+|..+.
T Consensus 64 ~v~el~~~L~~~G~~V~faIHPVAGR-M----PGhMNVLL------AEA~VPYd~v~EMdeIN~df 118 (207)
T 1djl_A 64 PIADLVKMLTEQGKKVRFGIHPVAGR-M----PGQLNVLL------AEAGVPYDIVLEMDEINHDF 118 (207)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTCSS-S----TTHHHHHH------HHTTCCGGGEEEHHHHGGGG
T ss_pred HHHHHHHHHHHCCCeEEEEeCccCCC-C----CCCCcEEE------EEeCCCHHHHhhHHHHhhhh
Confidence 5699999999999999999999 32 1 23445553 3556654 233355655443
No 71
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=66.65 E-value=9.7 Score=29.49 Aligned_cols=48 Identities=19% Similarity=0.380 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHH
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQ 74 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~ 74 (166)
.++.+++.++.|++.|++.+ .+|||.....+.++.++.+.+-|.++.+
T Consensus 87 ~~~~~~~~i~~A~~lG~~~v-~~~~g~~~~~~~~~~~~~~~~~l~~l~~ 134 (287)
T 2x7v_A 87 SVELLKKEVEICRKLGIRYL-NIHPGSHLGTGEEEGIDRIVRGLNEVLN 134 (287)
T ss_dssp HHHHHHHHHHHHHHHTCCEE-EECCEECTTSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCEE-EEecCCCCCCCHHHHHHHHHHHHHHHHc
Confidence 46788999999999999986 4688754333345667777777877765
No 72
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=66.39 E-value=22 Score=31.27 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=25.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 54 ITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 54 ~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
+++.+++-.+.|+.=+....+.||+-|= +|-+.
T Consensus 170 Ln~~np~Vr~~i~~~~~~W~~~gvDGfR--lDa~~ 202 (558)
T 1uok_A 170 LNWDNEKVRQDVYEMMKFWLEKGIDGFR--MDVIN 202 (558)
T ss_dssp BCTTSHHHHHHHHHHHHHHHHTTCCEEE--ETTGG
T ss_pred ccCCCHHHHHHHHHHHHHHHHcCCCEEE--Ecccc
Confidence 4456667778888888888899999988 45443
No 73
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=66.08 E-value=17 Score=28.00 Aligned_cols=51 Identities=12% Similarity=0.283 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCCCC-CCCHHHHHHHHHHHHHHHH--cCC
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLDIT-YSSGKEVATLKRKLEQVAQ--FGC 77 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~-~s~~~d~~~L~~K~~ql~~--lGv 77 (166)
.++.+++.++.|.+.|+..+ .+|||.... ++.++.++.+.+.|..+.+ .||
T Consensus 87 ~~~~~~~~i~~A~~lGa~~v-~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~~~gv 140 (285)
T 1qtw_A 87 SRDAFIDEMQRCEQLGLSLL-NFHPGSHLMQISEEDCLARIAESINIALDKTQGV 140 (285)
T ss_dssp HHHHHHHHHHHHHHTTCCEE-EECCCBCTTTSCHHHHHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHHcCCCEE-EECcCCCCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 46789999999999999987 578886432 2445667777777777754 355
No 74
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=65.88 E-value=20 Score=31.64 Aligned_cols=34 Identities=24% Similarity=0.349 Sum_probs=25.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 53 DITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 53 ~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
++++++++-.+.|+.=+....+.||+-|= +|-+.
T Consensus 183 dLN~~np~Vr~~l~~~~~~Wl~~gvDGfR--lDa~~ 216 (570)
T 1m53_A 183 DLNWDNPKVREDLYAMLRFWLDKGVSGMR--FDTVA 216 (570)
T ss_dssp BBCTTSHHHHHHHHHHHHHHHTTTCCEEE--ETTGG
T ss_pred ccCCCCHHHHHHHHHHHHHHHHcCCCEEE--Ecccc
Confidence 34556677778888888888899999887 55554
No 75
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=65.69 E-value=29 Score=26.49 Aligned_cols=56 Identities=21% Similarity=0.312 Sum_probs=33.6
Q ss_pred HHHHHHHCCCeEEEEecC--CCC-CCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 33 LISAAKEQGIDFYYALSP--GLD-ITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 33 L~~~a~~~~v~Fv~aisP--G~~-~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
.++.+++.|+.+|.-=++ +.. +.+=..+..+.-..=.+.|.+.|.|.++++...-.
T Consensus 84 ~~~~l~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~i~~i~~~~~ 142 (292)
T 3k4h_A 84 IIQYLHEQNFPFVLIGKPYDRKDEITYVDNDNYTAAREVAEYLISLGHKQIAFIGGGSD 142 (292)
T ss_dssp HHHHHHHTTCCEEEESCCSSCTTTSCEEECCHHHHHHHHHHHHHHTTCCCEEEEESCTT
T ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCEEEECcHHHHHHHHHHHHHCCCceEEEEeCccc
Confidence 455666778888775444 211 22211123445555566788899999999876543
No 76
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=65.68 E-value=26 Score=27.11 Aligned_cols=123 Identities=10% Similarity=0.025 Sum_probs=63.1
Q ss_pred HHHHHHHHHCCCeEEEEecCCCC------CCCCCHHHHHHHHHHHHHHHHcC--CCeeEEecCCCCCCCCHHHHHHHhhH
Q psy629 31 TGLISAAKEQGIDFYYALSPGLD------ITYSSGKEVATLKRKLEQVAQFG--CRGFALLFDDIESEMSEADKEVFQSF 102 (166)
Q Consensus 31 ~~L~~~a~~~~v~Fv~aisPG~~------~~~s~~~d~~~L~~K~~ql~~lG--vr~FailfDDi~~~~~~~d~~~f~~~ 102 (166)
...++.+++.||.+|.-=++..+ +.+-.....+.-..=.+.|.+.| .+.++++..+.+......=.+.|...
T Consensus 76 ~~~~~~~~~~giPvV~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~g~~~~~i~~i~g~~~~~~~~~R~~Gf~~~ 155 (297)
T 3rot_A 76 SKSLQRANKLNIPVIAVDTRPKDKTKNPYLVFLGSDNLLAGKKLGEKALELTPSAKRALVLNPQPGHIGLEKRAYGIKTI 155 (297)
T ss_dssp HHHHHHHHHHTCCEEEESCCCSCTTTSCCSCEEECCHHHHHHHHHHHHHHHCTTCCEEEEEESCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEcCCCccccccCcceEEccChHHHHHHHHHHHHHhcCCCceEEEEeCCCCcHHHHHHHHHHHHH
Confidence 45566777788888775444221 11111123455555566788889 99999987554432221122233221
Q ss_pred HH----------------HHHHHHHHHHHHcCCCCceEccccccccccCCCCCChhHHHHHhhccCC-CceEEe
Q psy629 103 AH----------------AQVSVTNEVFEHLGQPKFMLCPTQYCSTRAVPNVKNSEYLNTLGSKLAK-EIDIMW 159 (166)
Q Consensus 103 a~----------------aq~~l~n~v~~~l~~~~l~~cPt~Y~~~~~~~~~~~~~Yl~~l~~~L~~-~i~i~W 159 (166)
.. .-...+.++.+..+.+.-+||......-. --..+++.|...|. +|.|+=
T Consensus 156 l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~~A~g------~~~al~~~g~~vP~~dv~vig 223 (297)
T 3rot_A 156 LQDKGIFFEELDVGTDPNQVQSRVKSYFKIHPETNIIFCLTSQALDP------LGQMLLHPDRYDFNYQPQVYS 223 (297)
T ss_dssp HHHTTCEEEEEECCSCHHHHHHHHHHHHHHCTTCCEEEESSHHHHHH------HHHHHHSHHHHTCCCCCEEEE
T ss_pred HHhcCCeEEEeecCCChHHHHHHHHHHHHhCCCCCEEEEcCCcchHH------HHHHHHhcCCccCCCceEEEE
Confidence 10 01112233333334445677765443221 24567777766776 777763
No 77
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=65.51 E-value=49 Score=26.48 Aligned_cols=30 Identities=7% Similarity=0.115 Sum_probs=27.3
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.|.++.++.|+++++.|+++|+..+..+|-
T Consensus 62 ~~~~~~~~~l~~~v~~a~~~Gi~vildlh~ 91 (343)
T 1ceo_A 62 EYKEDGLSYIDRCLEWCKKYNLGLVLDMHH 91 (343)
T ss_dssp CBCHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cccHHHHHHHHHHHHHHHHCCCEEEEEecC
Confidence 356788999999999999999999999986
No 78
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=65.51 E-value=21 Score=31.84 Aligned_cols=61 Identities=15% Similarity=0.145 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCC---C---------------------------------------------------
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPG---L--------------------------------------------------- 52 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG---~--------------------------------------------------- 52 (166)
.++|++|+++|+++||+.+.=+-+. .
T Consensus 198 ~~df~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~p~~dw~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wf~~~ 277 (601)
T 3edf_A 198 NEDFVRLSTEARKRGMGLIQDVVLSHIGKHHWWMKDLPTPDWINYGGKFVPTQHHRVAVQDPYAAQADSENFTKGWFVEG 277 (601)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTTSGGGGSCSSTTSBGGGGSCCBCCCCGGGGGCTTCCHHHHHHHHHSBSSTT
T ss_pred HHHHHHHHHHHHHcCCEEEEEECCcccCCcchhhhhCCccCceeeCCCCCCCccccccccCCCCcccccccccccccccc
Confidence 5789999999999999998755331 0
Q ss_pred --CCCCCCHHHHHHHHHHHHHHH-HcCCCeeEEecCCCCC
Q psy629 53 --DITYSSGKEVATLKRKLEQVA-QFGCRGFALLFDDIES 89 (166)
Q Consensus 53 --~~~~s~~~d~~~L~~K~~ql~-~lGvr~FailfDDi~~ 89 (166)
++++++++-.+.|+.=+.... +.||+-|= +|-+..
T Consensus 278 lpdLN~~np~V~~~l~~~~~~Wi~~~GVDGfR--lD~~~~ 315 (601)
T 3edf_A 278 MPDLNQTNPLVANYLIQNNIWWIEYAGLSGLR--IDTYGY 315 (601)
T ss_dssp SCBBCTTSHHHHHHHHHHHHHHHHHHTCSEEE--ESSGGG
T ss_pred ccccccCCHHHHHHHHHHHHHHHhhcCCCEEE--eecccc
Confidence 244455666677777777777 89999888 565543
No 79
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=65.44 E-value=46 Score=26.78 Aligned_cols=63 Identities=13% Similarity=0.132 Sum_probs=45.5
Q ss_pred ccCCCHHHH-HHHHHHHHHHHHCCCeEEEEecCCCCC--CCCCHHHHHHHHHHHHHHHHcCCCeeE
Q psy629 19 RDLYSVEEA-EHLTGLISAAKEQGIDFYYALSPGLDI--TYSSGKEVATLKRKLEQVAQFGCRGFA 81 (166)
Q Consensus 19 re~Yp~~~l-~~l~~L~~~a~~~~v~Fv~aisPG~~~--~~s~~~d~~~L~~K~~ql~~lGvr~Fa 81 (166)
++++|.+++ +.++.+++++++.|+.|++--+-+..+ .-+..+.++.++++...+.++|+..+-
T Consensus 121 k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~eAGAd~i~ 186 (255)
T 2qiw_A 121 KRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQAGARSVY 186 (255)
T ss_dssp TEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHHHHHHHTCSEEE
T ss_pred CcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHHHHHHcCCcEEE
Confidence 367787776 689999999888899988777654310 001123589999999999999976443
No 80
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=65.18 E-value=23 Score=27.53 Aligned_cols=53 Identities=15% Similarity=0.146 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCC-CCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGL-DITYSSGKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~-~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
.+.|++|++.|++.||++.+=-++.. .....+.+++..|+++ +|-..+++.||
T Consensus 145 ~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~ll~~------v~~~~vg~~~D 198 (287)
T 3kws_A 145 CEQFNEMGTFAAQHGTSVIFEPLNRKECFYLRQVADAASLCRD------INNPGVRCMGD 198 (287)
T ss_dssp HHHHHHHHHHHHHTTCCEEECCCCTTTCSSCCCHHHHHHHHHH------HCCTTEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHHH------cCCCCeeEEee
Confidence 57899999999999997655444422 2223455555555544 45566888876
No 81
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=65.07 E-value=21 Score=30.58 Aligned_cols=60 Identities=17% Similarity=0.150 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCC----------------------------------------------------CCC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPG----------------------------------------------------LDI 54 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG----------------------------------------------------~~~ 54 (166)
.++|++|+++|+++||+.+.=+-|. -++
T Consensus 102 ~~df~~Lv~~aH~~Gi~VilD~V~NH~s~~~~~f~~~~~~~~~s~y~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~pdl 181 (488)
T 2wc7_A 102 NEAFKELLDAAHQRNIKVVLDGVFNHSSRGFFFFHDVLENGPHSPWVNWFKIEGWPLSPYNGEFPANYVGWAGNRALPEF 181 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCSSSHHHHHHHHHGGGCTTGGGBCBCSSSCCSSCTTSCCCBCBGGGCTTSBBB
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCcCCCcCHHHHHHHhcCCCCCCCCceeecCCCCCCCCCCCCCCccccCCCCCcCee
Confidence 6899999999999999988765220 024
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 55 TYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 55 ~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
++++++-.+.|+.=+....+.||+-|= +|-+.
T Consensus 182 n~~np~vr~~i~~~~~~Wl~~gvDGfR--~D~~~ 213 (488)
T 2wc7_A 182 NHDNPEVREYIMEIAEYWLKFGIDGWR--LDVPF 213 (488)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHTCCEEE--ESSGG
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCCEEE--Eeccc
Confidence 555666677787777776799999998 45544
No 82
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=64.41 E-value=20 Score=31.38 Aligned_cols=60 Identities=20% Similarity=0.314 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecC--------------------------------------------------------
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSP-------------------------------------------------------- 50 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisP-------------------------------------------------------- 50 (166)
++.|++|+++|+++||+.+.=+-|
T Consensus 78 ~~df~~lv~~~h~~Gi~VilD~V~NH~s~~~~~f~~~~~~~~~~y~d~y~~~~~p~~~~~~f~~~~w~~~~~~~~~y~~~ 157 (543)
T 2zic_A 78 MADMDNLLTQAKMRGIKIIMDLVVNHTSDEHAWFIEAREHPDSSERDYYIWCDQPNDLESIFGGSAWQYDDKSDQYYLHF 157 (543)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCCTTSHHHHHHHHCTTSGGGGGBCEESSCCSCBCTTSSBSEEEETTTTEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecCcccccchhhHhhhcCCCCCCcceeecCCCCCcccccCCCCCCcccCCCCcEEECc
Confidence 689999999999999998754422
Q ss_pred ---C-CCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 51 ---G-LDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 51 ---G-~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
+ .++++++++-.+.|+.-+....+.||+-|= +|-+.
T Consensus 158 f~~~~pdLN~~np~Vr~~i~~~~~~Wl~~GvDGfR--lDa~~ 197 (543)
T 2zic_A 158 FSKKQPDLNWENANLRQKIYDMMNFWIDKGIGGFR--MDVID 197 (543)
T ss_dssp SCTTSCBBCTTCHHHHHHHHHHHHHHHTTTCCEEE--ETTGG
T ss_pred ccCCCCccCcCCHHHHHHHHHHHHHHHhcCCCEEE--ECCcc
Confidence 0 235566777788888888888999999887 55544
No 83
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=64.34 E-value=80 Score=28.28 Aligned_cols=61 Identities=13% Similarity=0.183 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCCCHH
Q psy629 28 EHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESEMSEA 94 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~~~~ 94 (166)
+++++.++.+++.|......|+.-.+-.+ +.+.+++-.+++.++|++.++ +=|.-|.+.+.
T Consensus 144 ~ni~~~i~~ak~~G~~v~~~i~~~~~~~~----~~e~~~~~a~~l~~~Gad~I~--L~DT~G~~~P~ 204 (539)
T 1rqb_A 144 RNMAHAMAAVKKAGKHAQGTICYTISPVH----TVEGYVKLAGQLLDMGADSIA--LKDMAALLKPQ 204 (539)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCCSTTC----CHHHHHHHHHHHHHTTCSEEE--EEETTCCCCHH
T ss_pred HHHHHHHHHHHHCCCeEEEEEEeeeCCCC----CHHHHHHHHHHHHHcCCCEEE--eCCCCCCcCHH
Confidence 67899999999999998888877332222 457778888889999999766 45666555443
No 84
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=64.25 E-value=18 Score=32.70 Aligned_cols=61 Identities=18% Similarity=0.335 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCC-------------------------------------------------------
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPG------------------------------------------------------- 51 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG------------------------------------------------------- 51 (166)
+++|++|+++|+++||+.+.=+-+.
T Consensus 115 ~~dfk~Lv~~aH~~GI~VilD~V~NHts~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~y~~~ 194 (686)
T 1d3c_A 115 IADFQNLIAAAHAKNIKVIIDFAPNHTSPASSDQPSFAENGRLYDNGTLLGGYTNDTQNLFHHNGGTDFSTTENGIYKNL 194 (686)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEETTEEEECSTTCTTCCBCCSCBCCSSSHHHHHHSBB
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCcCccccccccccchhhcCccccCCcccccCCCCccCceecCCCCCcCCCccccccCc
Confidence 7899999999999999988755331
Q ss_pred ---CCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCC
Q psy629 52 ---LDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIES 89 (166)
Q Consensus 52 ---~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~ 89 (166)
.++++++++-.+.|+.=+....+.||+-|= +|-+..
T Consensus 195 ~~~pDLn~~np~Vr~~i~~~l~~Wl~~GVDGfR--lDa~~~ 233 (686)
T 1d3c_A 195 YDLADLNHNNSTVDVYLKDAIKMWLDLGIDGIR--MNAVKH 233 (686)
T ss_dssp TTEEEBCTTSHHHHHHHHHHHHHHHHTTCCEEE--ETTGGG
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHHhCCCCEEE--Eecccc
Confidence 023344556667788888888889999987 554443
No 85
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=64.24 E-value=18 Score=28.22 Aligned_cols=20 Identities=25% Similarity=0.275 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHCCCeEE
Q psy629 26 EAEHLTGLISAAKEQGIDFY 45 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv 45 (166)
.++.+++.++.|++.|++.+
T Consensus 106 ~~~~~~~~i~~A~~lG~~~v 125 (295)
T 3cqj_A 106 GLEIMRKAIQFAQDVGIRVI 125 (295)
T ss_dssp HHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHcCCCEE
Confidence 33444444444444444443
No 86
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=63.96 E-value=28 Score=27.83 Aligned_cols=29 Identities=3% Similarity=-0.041 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 22 YSVEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 22 Yp~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
+.++.++.+.++++.|+++|+..+..+|-
T Consensus 76 ~~~~~~~~~d~~v~~a~~~Gi~vildlh~ 104 (320)
T 3nco_A 76 IDKFFLDRVKHVVDVALKNDLVVIINCHH 104 (320)
T ss_dssp BCHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 45677999999999999999999999985
No 87
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=63.96 E-value=84 Score=28.35 Aligned_cols=114 Identities=11% Similarity=0.150 Sum_probs=73.6
Q ss_pred CCeeeeccCCCh----------hhh--hhhc--cCCCHHHHHHHHHHHHHHHHCCCeEEEEe-cCCCC------------
Q psy629 1 MDSYLYAPKDDY----------KHR--AYWR--DLYSVEEAEHLTGLISAAKEQGIDFYYAL-SPGLD------------ 53 (166)
Q Consensus 1 mN~YiYAPKdDp----------yhr--~~Wr--e~Yp~~~l~~l~~L~~~a~~~~v~Fv~ai-sPG~~------------ 53 (166)
||.+..--.||. .+. ..|| ..|+. +++++|++.|+++||+++=-| .||-.
T Consensus 218 lN~lH~HltDdqgwrlei~~~P~Lt~~Ga~~~~~~YT~---~di~eiv~yA~~rgI~VIPEId~PGH~~a~~~~~~l~~~ 294 (572)
T 3ozo_A 218 LNTFHWHITDSQSFPFVTTKRPNLYKFGALSPQKVYTK---AAIREVVRFGLERGVRVLPEFDAPAHVGEGWQDTDLTVC 294 (572)
T ss_dssp CCEEEEECCCSSCCCBCCSSSHHHHHHHSSSSSSCBCH---HHHHHHHHHHHHTTCEEEEEEEESSSCCTTCTTTTCEEC
T ss_pred CceEEEEeecCcCceeccccCcchhccCCcCCCCCcCH---HHHHHHHHHHHHhCCceeeeeccchHHHHHhcCchhhhc
Confidence 677777777773 121 1122 34544 567889999999999998765 23321
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHcCC--CeeEEecCCCCCC---CCHHHHH-----HH----hhH
Q psy629 54 -----------------ITYSSGKEVATLKRKLEQVAQFGC--RGFALLFDDIESE---MSEADKE-----VF----QSF 102 (166)
Q Consensus 54 -----------------~~~s~~~d~~~L~~K~~ql~~lGv--r~FailfDDi~~~---~~~~d~~-----~f----~~~ 102 (166)
++-++++-++-|.+=|+.+.++=. +.|=|-.|.+... .+++-++ .+ .+.
T Consensus 295 ~~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~v~~Ev~~lF~s~~~iHiGgDE~~~~~W~~~p~~q~~m~~~g~~~~~~~~ 374 (572)
T 3ozo_A 295 FKAEPWKSYCVEPPCGQLNPTKDELYQYLEDIYSDMAEVFDTTDIFHMGGDEVSEACWNSSDSIQNFMMQNRWDLDKESF 374 (572)
T ss_dssp TTCSSGGGTCSSSSCCEECTTCTHHHHHHHHHHHHHHHHCCSCSCEEEECCCCCHHHHHTCHHHHHHHHHTTCCSSTTTH
T ss_pred cCcCCccccccCCCCcccCCCChhHHHHHHHHHHHHHHhcCCCCEEEEcCcccccccccCCHHHHHHHHHcCCCcCccCH
Confidence 233456778888888888888653 6788889998732 1221111 11 235
Q ss_pred HHHHHHHHHHHHHHc
Q psy629 103 AHAQVSVTNEVFEHL 117 (166)
Q Consensus 103 a~aq~~l~n~v~~~l 117 (166)
.++|.++++++.+.+
T Consensus 375 ~~L~~~F~~rv~~~l 389 (572)
T 3ozo_A 375 LKLWNYFQQKAQDKA 389 (572)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 678999999987765
No 88
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=63.95 E-value=5.5 Score=31.15 Aligned_cols=22 Identities=14% Similarity=0.492 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHCCCeEEEEecC
Q psy629 29 HLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.++||++.-+++|++.-|||||
T Consensus 49 ~v~el~~~L~~~G~~V~faIHP 70 (186)
T 2bru_C 49 PVAEITEKLRARGINVRFGIHP 70 (186)
T ss_dssp HHHHHHHHHHHHCCEEEEEECS
T ss_pred HHHHHHHHHHHCCCeEEEEecc
Confidence 6899999999999999999999
No 89
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=63.81 E-value=24 Score=31.01 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=25.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 53 DITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 53 ~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
++++.+++-.+.|+.=+....+.||+-|= +|-+.
T Consensus 170 dLN~~np~Vr~~l~~~~~~Wl~~gvDGfR--lDa~~ 203 (557)
T 1zja_A 170 DLNWDTPKLREELYAMLRFWLDKGVSGMR--FDTVA 203 (557)
T ss_dssp BBCTTCHHHHHHHHHHHHHHHTTTCCEEE--ETTGG
T ss_pred ccCCCCHHHHHHHHHHHHHHHHcCCCEEe--ecchh
Confidence 34566677778888888888899999987 55544
No 90
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=63.62 E-value=12 Score=32.70 Aligned_cols=81 Identities=12% Similarity=0.172 Sum_probs=46.9
Q ss_pred eeccCCChhhhhhhccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 5 LYAPKDDYKHRAYWRDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 5 iYAPKdDpyhr~~Wre~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
+|.+..|..++.+.+.. .++-++.+.+.++.|++.|+++.+.+.=+ | ..+.+.+.+-++++.++|++.+. +
T Consensus 129 i~~s~Sd~~~~~~l~~s-~~e~l~~~~~~v~~ak~~G~~V~~~~eda----~--r~d~~~~~~v~~~~~~~Ga~~i~--l 199 (423)
T 3ivs_A 129 VVIGTSQYLRKYSHGKD-MTYIIDSATEVINFVKSKGIEVRFSSEDS----F--RSDLVDLLSLYKAVDKIGVNRVG--I 199 (423)
T ss_dssp EEEEC--------------CHHHHHHHHHHHHHHTTTCEEEEEEESG----G--GSCHHHHHHHHHHHHHHCCSEEE--E
T ss_pred EEeeccHHHHHHHcCCC-HHHHHHHHHHHHHHHHHCCCEEEEEEccC----c--CCCHHHHHHHHHHHHHhCCCccc--c
Confidence 45666665554444432 23457889999999999999988876421 1 12345567778888899999865 4
Q ss_pred CCCCCCCCHH
Q psy629 85 DDIESEMSEA 94 (166)
Q Consensus 85 DDi~~~~~~~ 94 (166)
=|.-+...+.
T Consensus 200 ~DTvG~~~P~ 209 (423)
T 3ivs_A 200 ADTVGCATPR 209 (423)
T ss_dssp EETTSCCCHH
T ss_pred CCccCcCCHH
Confidence 4555444433
No 91
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=63.07 E-value=29 Score=29.71 Aligned_cols=61 Identities=16% Similarity=0.300 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCC-------------------------------------------------------
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPG------------------------------------------------------- 51 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG------------------------------------------------------- 51 (166)
.++|++|+++|+++||+.+.=+-+.
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~~i~~~~~~~~~~~~~~~~~ 153 (471)
T 1jae_A 74 ESAFTDMTRRCNDAGVRIYVDAVINHMTGMNGVGTSGSSADHDGMNYPAVPYGSGDFHSPCEVNNYQDADNVRNCELVGL 153 (471)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCSSCEEBTTSCEEBTTTTBBTTTTBCGGGBCCCCBCCCTTCHHHHHHSBBTTB
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccCCCCcCCCCCccCccCCcCCCCCCCHhHcCCCCCccCCCChhhccccccCCC
Confidence 6899999999999999987754220
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCC
Q psy629 52 LDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIES 89 (166)
Q Consensus 52 ~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~ 89 (166)
.++++++++-.+.|+.=+....+.||+-|= +|=+..
T Consensus 154 pdLn~~np~V~~~i~~~~~~w~~~gvDGfR--lDa~~~ 189 (471)
T 1jae_A 154 RDLNQGSDYVRGVLIDYMNHMIDLGVAGFR--VDAAKH 189 (471)
T ss_dssp CBBCTTSHHHHHHHHHHHHHHHHTTCCEEE--ETTGGG
T ss_pred CccCcCCHHHHHHHHHHHHHHHHcCCCEEE--eechhc
Confidence 123344556677788888888899999887 555554
No 92
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=62.96 E-value=19 Score=27.83 Aligned_cols=53 Identities=15% Similarity=0.244 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCCCC-CCCCHHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGLDI-TYSSGKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~~~-~~s~~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
.+.|+++++.|++.||++++=-+++... ...+.++...|+++ +|-..+++.+|
T Consensus 132 ~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~------~~~~~~g~~~D 185 (290)
T 2qul_A 132 IESVRRVIKVAEDYGIIYALEVVNRFEQWLCNDAKEAIAFADA------VDSPACKVQLD 185 (290)
T ss_dssp HHHHHTTHHHHHHHTCEEEEECCCTTTCSSCCSHHHHHHHHHH------HCCTTEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCccccccccCCHHHHHHHHHH------cCCCCEEEEEE
Confidence 5688999999999999876665553221 22345555555443 35567888885
No 93
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=62.94 E-value=3.3 Score=34.34 Aligned_cols=99 Identities=18% Similarity=0.188 Sum_probs=59.8
Q ss_pred HHHHHHHHHCCCeEEEEecCCCCCCCCCHH----HHHHHHHHHHHHHHcCCCe-eEEecCCCCCC---------------
Q psy629 31 TGLISAAKEQGIDFYYALSPGLDITYSSGK----EVATLKRKLEQVAQFGCRG-FALLFDDIESE--------------- 90 (166)
Q Consensus 31 ~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~----d~~~L~~K~~ql~~lGvr~-FailfDDi~~~--------------- 90 (166)
..|++.|++.+-..|+++.|--.. |...+ -...+-+|++.|.++||+. |..-|+++...
T Consensus 33 ~~Li~~A~~~a~~vVvsff~nP~q-f~~~ed~~~yp~tle~d~~ll~~~GvD~vf~p~f~~m~p~~f~~~v~~~~~~~~v 111 (276)
T 1v8f_A 33 LALVERARRENPFVVVSVFVNPLQ-FGPGEDYHRYPRDLERDRALLQEAGVDLLFAPGVEEMYPEGFATRVQVEGPLTAL 111 (276)
T ss_dssp HHHHHHHHHHCSEEEEEECCCGGG-CCTTSSTTTSCCCHHHHHHHHHHTTCSEEECCCHHHHSCTTCCEEEEECSHHHHS
T ss_pred HHHHHHHHHhCCEEEEEEECCHHH-hCCCcccCCCCcCHHHHHHHHHhCCCCEEEeCChHhCCCcCCeEEEEecCCcceE
Confidence 457777777776778888772111 11111 1345677888888999997 55557766532
Q ss_pred CCHH----------------------HHHHHhhHHHHHHHHHHHHHHHcCCC-CceEcccccc
Q psy629 91 MSEA----------------------DKEVFQSFAHAQVSVTNEVFEHLGQP-KFMLCPTQYC 130 (166)
Q Consensus 91 ~~~~----------------------d~~~f~~~a~aq~~l~n~v~~~l~~~-~l~~cPt~Y~ 130 (166)
++.+ |.-.|+.-...|..++.++.+.++-+ ..+-||+.=.
T Consensus 112 l~G~~RpghF~GV~TVv~kLf~iv~Pd~~~FG~kd~qq~~~l~~~~~dl~~~v~iv~~p~vr~ 174 (276)
T 1v8f_A 112 WEGAVRPGHFQGVATVVARLFLLVQPQRAYFGEKDYQQLLVVRRMVRDLGFPVEVVGVPTVRE 174 (276)
T ss_dssp THHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHHTCCCEEEEECCCBC
T ss_pred EecCCCCCeecceeehhhHhhcccCCCEEEECCCCCcCHHHHHHHHHHcCCeEEEEecCcEEc
Confidence 1111 21223333445778888888877764 3677898765
No 94
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=62.88 E-value=22 Score=32.76 Aligned_cols=60 Identities=17% Similarity=0.306 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecC---------------------CC---------------CCCCCC--HHHHHHHHHH
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSP---------------------GL---------------DITYSS--GKEVATLKRK 68 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisP---------------------G~---------------~~~~s~--~~d~~~L~~K 68 (166)
.++|++|+++|+++||+.+.=+-+ |. +++|++ ++-.+.|+.-
T Consensus 320 ~edfk~LV~~aH~~GI~VilD~V~Nhs~~~~~~~~~~dwf~~~~dg~~~~~~~~~~~~~~~~dLn~~n~~p~V~~~l~~~ 399 (695)
T 3zss_A 320 LDDFDHFVTEAGKLGLEIALDFALQCSPDHPWVHKHPEWFHHRPDGTIAHAENPPKKYQDIYPIAFDADPDGLATETVRI 399 (695)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCEECTTSTHHHHCGGGSCCCTTSCCCCEEETTEEETTCEECCCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEeeccCCccchhhhcccceeeecCCCCcccCCCCCccccccccccccCCcHHHHHHHHHH
Confidence 589999999999999998865432 11 256766 6777888888
Q ss_pred HHHHHHcCCCeeEEecCCCC
Q psy629 69 LEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 69 ~~ql~~lGvr~FailfDDi~ 88 (166)
+....+.||+-|= ||-+.
T Consensus 400 l~~Wi~~GVDGfR--lD~a~ 417 (695)
T 3zss_A 400 LRHWMDHGVRIFR--VDNPH 417 (695)
T ss_dssp HHHHHHTTCCEEE--ESSGG
T ss_pred HHHHHHhCCCEEE--ecCcc
Confidence 8888889999888 56554
No 95
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*
Probab=62.68 E-value=15 Score=32.57 Aligned_cols=58 Identities=22% Similarity=0.379 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCC--CCCCCCHHHHHHHHHHHHHHHHc----CCCeeEEecCC
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGL--DITYSSGKEVATLKRKLEQVAQF----GCRGFALLFDD 86 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~--~~~~s~~~d~~~L~~K~~ql~~l----Gvr~FailfDD 86 (166)
..+-++||+++|++.|++|+.-.||-- +-.|..+.++..... .||.+| |. .+.|-||=
T Consensus 110 krDiv~el~~A~r~~gl~~g~Y~S~~d~~~~~y~~~~~y~~~~~--~ql~EL~~~Yg~-~~~~W~Dg 173 (478)
T 3ues_A 110 KGDLVREVSESARRHGLKFGVYLSPWDRTEESYGKGKAYDDFYV--GQLTELLTQYGP-IFSVWLDG 173 (478)
T ss_dssp TCCHHHHHHHHHHHTTCEEEEEECSCCSSCTTTTSSHHHHHHHH--HHHHHHHHSSSC-CSEEEECC
T ss_pred CCCHHHHHHHHHHHcCCeEEEEeChHHhCCcccCchHHHHHHHH--HHHHHHHhcCCc-ceEEEeeC
Confidence 357899999999999999999999921 223444445554442 466665 42 23455664
No 96
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=62.62 E-value=29 Score=31.81 Aligned_cols=61 Identities=10% Similarity=0.156 Sum_probs=45.2
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEEecCC----------------------------------------CCCCCCCHHH
Q psy629 22 YSVEEAEHLTGLISAAKEQGIDFYYALSPG----------------------------------------LDITYSSGKE 61 (166)
Q Consensus 22 Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG----------------------------------------~~~~~s~~~d 61 (166)
.+...+++|++||++|+++||+.+.=+-+. .++++++.+-
T Consensus 261 ~~~~~~~dfk~lv~~~H~~Gi~VilDvV~NH~~~~~~~~~~~~~~~~~~~~yy~~~~~~~~~~~~~~~~~~~ln~~~p~v 340 (718)
T 2vr5_A 261 CLGGQVLSFKKMVNELHNAGIEVIIDVVYNHTAEGNHLGPTLSFRGIDNTAYYMLQPDNKRYYLDFTGTGNTLNLSHPRV 340 (718)
T ss_dssp TTTHHHHHHHHHHHHHHTTTCEEEEEECCSCCSSCSTTSCCSSHHHHHSTTTBCBCTTTSSSBCCSSSSSCCBCTTSHHH
T ss_pred CCCchHHHHHHHHHHHHHCCCEEEEEeccCcccCccccCccccccCCCCCcceEeCCCCCceeecCCCccCeecCCCHHH
Confidence 344558999999999999999988765321 2345666676
Q ss_pred HHHHHHHHHHHHH-cCCCeeEE
Q psy629 62 VATLKRKLEQVAQ-FGCRGFAL 82 (166)
Q Consensus 62 ~~~L~~K~~ql~~-lGvr~Fai 82 (166)
.+.|+.=+....+ .||+-|=+
T Consensus 341 ~~~i~d~l~~W~~e~gvDGfR~ 362 (718)
T 2vr5_A 341 IQMVLDSLRYWVTEMHVDGFRF 362 (718)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEE
Confidence 7777777777776 89998874
No 97
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=62.57 E-value=38 Score=26.74 Aligned_cols=27 Identities=11% Similarity=0.161 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
++.++.+.++++.|+++|+..+..+|-
T Consensus 70 ~~~~~~~d~~v~~a~~~Gi~vild~h~ 96 (317)
T 3aof_A 70 DRFFKRVDEVINGALKRGLAVVINIHH 96 (317)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEecC
Confidence 777999999999999999999999984
No 98
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=62.19 E-value=66 Score=28.91 Aligned_cols=61 Identities=16% Similarity=0.254 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCC--------------------------CCCCCCCHHHHHHHHHHHHHHH-HcCCCe
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPG--------------------------LDITYSSGKEVATLKRKLEQVA-QFGCRG 79 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG--------------------------~~~~~s~~~d~~~L~~K~~ql~-~lGvr~ 79 (166)
.++|++||++|+++||+.+.=+-|. .++++++++-.+.|+.-+.... +.||+-
T Consensus 202 ~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~wg~~ln~~~p~V~~~i~~~~~~w~~~~gvDG 281 (618)
T 3m07_A 202 PDDFKAFIDAAHGYGLSVVLDIVLNHFGPEGNYLPLLAPAFFHKERMTPWGNGIAYDVDAVRRYIIEAPLYWLTEYHLDG 281 (618)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCCHHHHCGGGEEEEEEETTEEEECTTSHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHHCCCEEEEeecCccCCCCcccccccCchhhcCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCccE
Confidence 5799999999999999998876552 1246667777788888888877 899999
Q ss_pred eEEecCCCCC
Q psy629 80 FALLFDDIES 89 (166)
Q Consensus 80 FailfDDi~~ 89 (166)
|= ||-+..
T Consensus 282 fR--~D~~~~ 289 (618)
T 3m07_A 282 LR--FDAIDQ 289 (618)
T ss_dssp EE--ETTGGG
T ss_pred EE--ecchhh
Confidence 88 676653
No 99
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=61.97 E-value=26 Score=30.73 Aligned_cols=33 Identities=18% Similarity=0.296 Sum_probs=25.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 54 ITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 54 ~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
+++.+++-.+.|+.=+....+.||+-|= +|-+.
T Consensus 170 Ln~~np~V~~~l~~~~~~W~~~gvDGfR--lDa~~ 202 (555)
T 2ze0_A 170 LNWENSEVRQALYEMVNWWLDKGIDGFR--IDAIS 202 (555)
T ss_dssp BCTTCHHHHHHHHHHHHHHHHHTCCEEE--EESGG
T ss_pred cCCCCHHHHHHHHHHHHHHHHcCCCEEE--Ecccc
Confidence 4566777788888888888889999987 45443
No 100
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=61.75 E-value=26 Score=31.65 Aligned_cols=61 Identities=18% Similarity=0.325 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCC-------------------------------------------------------
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPG------------------------------------------------------- 51 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG------------------------------------------------------- 51 (166)
+++|++|+++|+++||+.+.=+-|.
T Consensus 116 ~~dfk~Lv~~aH~~GikVilD~V~NHts~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~w~~~~~~~y~~~ 195 (683)
T 3bmv_A 116 FTDFQNLINTAHAHNIKVIIDFAPNHTSPASETDPTYAENGRLYDNGTLLGGYTNDTNGYFHHYGGTDFSSYEDGIYRNL 195 (683)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEETTEEEECSTTCTTCCBCCSCBCCCSSHHHHHHSBS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcccccccccccCcchhccCccccCCcccccCCCCcccccccCCCCCcCCcccccccCc
Confidence 7899999999999999988755331
Q ss_pred ---CCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCC
Q psy629 52 ---LDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIES 89 (166)
Q Consensus 52 ---~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~ 89 (166)
.++++.+++-.+.|+.=+....+.||+-|= +|-+..
T Consensus 196 ~~~pdLn~~np~Vr~~i~~~l~~Wl~~GVDGfR--lDa~~~ 234 (683)
T 3bmv_A 196 FDLADLNQQNSTIDSYLKSAIKVWLDMGIDGIR--LDAVKH 234 (683)
T ss_dssp TTEEEBCTTSHHHHHHHHHHHHHHHHTTCCEEE--ESCGGG
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHHhCCCCEEE--Eecccc
Confidence 023344455667788888888889999987 565543
No 101
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=61.19 E-value=35 Score=26.98 Aligned_cols=55 Identities=7% Similarity=-0.039 Sum_probs=31.6
Q ss_pred HHHHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCC
Q psy629 33 LISAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDI 87 (166)
Q Consensus 33 L~~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi 87 (166)
+.+.+++.++-+|.-=++ +..+.+-..++.+.-..=.+.|.+.|.+.++++....
T Consensus 135 ~~~~~~~~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~~~~ 191 (338)
T 3dbi_A 135 IDDIIDAHSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAGHQEIAFLTGSM 191 (338)
T ss_dssp HHHHHHHCSSCEEEESSCCSSSGGGEECBCHHHHHHHHHHHHHHTTCCSEEEECCCT
T ss_pred HHHHHHcCCCCEEEEcCCCCCCCCCEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 445566777776654332 2221111112344555556778899999999987643
No 102
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=60.96 E-value=33 Score=31.60 Aligned_cols=61 Identities=15% Similarity=0.232 Sum_probs=46.1
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEEecCC----------------------------------------------CCCC
Q psy629 22 YSVEEAEHLTGLISAAKEQGIDFYYALSPG----------------------------------------------LDIT 55 (166)
Q Consensus 22 Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG----------------------------------------------~~~~ 55 (166)
.|....++|++||++|+++||+.+.=+-+. .+++
T Consensus 267 ~~~~~~~efk~lV~~~H~~Gi~VilDvV~NH~~~~~~~~~~d~~~~p~~~~~~~d~~~~y~~~~~~~~~~~~~g~~~~ln 346 (750)
T 1bf2_A 267 AAGGPTAEFQAMVQAFHNAGIKVYMDVVYNHTAEGGTWTSSDPTTATIYSWRGLDNATYYELTSGNQYFYDNTGIGANFN 346 (750)
T ss_dssp STTHHHHHHHHHHHHHHHTTCEEEEEECCSSCTTCSBSSSSCSSCBBCSSHHHHHHHHHBCBCTTSSSBCCSSSSSCCBC
T ss_pred CCccHHHHHHHHHHHHHHCCCEEEEEEecccccCcccccccccccCCCcccccCCCCcceEECCCCCceecCCCcCCccc
Confidence 345668999999999999999987654221 2455
Q ss_pred CCCHHHHHHHHHHHHHHHH-cCCCeeEE
Q psy629 56 YSSGKEVATLKRKLEQVAQ-FGCRGFAL 82 (166)
Q Consensus 56 ~s~~~d~~~L~~K~~ql~~-lGvr~Fai 82 (166)
+++++-.+.|+.=+....+ .||+-|=+
T Consensus 347 ~~~p~V~~~i~d~l~~W~~e~gvDGfR~ 374 (750)
T 1bf2_A 347 TYNTVAQNLIVDSLAYWANTMGVDGFRF 374 (750)
T ss_dssp TTSHHHHHHHHHHHHHHHHTSCCCEEEE
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 6666777788888887777 89999874
No 103
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=60.87 E-value=17 Score=27.99 Aligned_cols=27 Identities=11% Similarity=0.128 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 62 VATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 62 ~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
.+.-..=.+.|.+.|.+.++++-..-+
T Consensus 110 ~~~g~~a~~~L~~~G~~~i~~i~~~~~ 136 (291)
T 3egc_A 110 VRGARTAVEYLIARGHTRIGAIVGSAG 136 (291)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEECSCTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCCCC
Confidence 455555567788899999999876543
No 104
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=60.81 E-value=25 Score=27.87 Aligned_cols=52 Identities=17% Similarity=0.224 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcC-CCeeEEecCC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFG-CRGFALLFDD 86 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lG-vr~FailfDD 86 (166)
.+.|++|++.|++.||++++=-+|+..+ .+.+++..|++ .+| -..+++.+|=
T Consensus 159 ~~~l~~l~~~a~~~Gv~l~lEn~~~~~~--~~~~~~~~ll~------~v~~~~~vg~~~D~ 211 (340)
T 2zds_A 159 ADRWNPILDVFDAEGVRFAHEVHPSEIA--YDYWTTHRALE------AVGHRPAFGLNFDP 211 (340)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCTTSSC--CSHHHHHHHHH------HTTTCTTEEEEECC
T ss_pred HHHHHHHHHHHHHcCCEEEEEcCCCccc--CCHHHHHHHHH------hcCCCCCeeEEEch
Confidence 4688999999999999887777765432 24444444443 345 5569999863
No 105
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=60.14 E-value=34 Score=25.72 Aligned_cols=56 Identities=9% Similarity=0.013 Sum_probs=32.0
Q ss_pred HHHHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 33 LISAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 33 L~~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
.++.+++.|+.+|.-=++ +..+.+-.....+....=.+.|.+.|.|.++++..+-+
T Consensus 74 ~~~~~~~~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G~~~i~~i~~~~~ 131 (272)
T 3o74_A 74 SYRELQDKGLPVIAIDRRLDPAHFCSVISDDRDASRQLAASLLSSAPRSIALIGARPE 131 (272)
T ss_dssp HHHHHHHTTCCEEEESSCCCTTTCEEEEECHHHHHHHHHHHHHTTCCSEEEEEEECTT
T ss_pred HHHHHHHcCCCEEEEccCCCccccCEEEEchHHHHHHHHHHHHHCCCcEEEEEecCCC
Confidence 344556667777655443 11221111123445555567888999999999865443
No 106
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=59.66 E-value=25 Score=30.06 Aligned_cols=24 Identities=25% Similarity=0.444 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.++|++||++|+++||+.+.=+-|
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~ 120 (484)
T 2aaa_A 97 ADNLKSLSDALHARGMYLMVDVVP 120 (484)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECc
Confidence 589999999999999998876544
No 107
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=59.65 E-value=26 Score=30.59 Aligned_cols=61 Identities=20% Similarity=0.419 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCC--------------------------------------------CCCCCCCHHHH
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPG--------------------------------------------LDITYSSGKEV 62 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG--------------------------------------------~~~~~s~~~d~ 62 (166)
+++|++|+++|+++||+.+.=+-|. .++++++++-.
T Consensus 92 ~~dfk~Lv~~aH~~GI~VilD~V~NHt~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~f~~~~~dLn~~np~Vr 171 (527)
T 1gcy_A 92 DAQLRQAASALGGAGVKVLYDVVPNHMNRGYPDKEINLPAGQGFWRNDCADPGNYPNDCDDGDRFIGGDADLNTGHPQVY 171 (527)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTTCSSCSCCCCSSSSCBGGGSCCCSSSCBTTBSSCCSTTSTTBBCTTSHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeecCcCCCCCCccccCCCcchhcccccCCCCCcccCcccCccccccCCccccCCHHHH
Confidence 7899999999999999988654220 12344456677
Q ss_pred HHHHHHHHHHHH-cCCCeeEEecCCCCC
Q psy629 63 ATLKRKLEQVAQ-FGCRGFALLFDDIES 89 (166)
Q Consensus 63 ~~L~~K~~ql~~-lGvr~FailfDDi~~ 89 (166)
+.|+.=+..+.+ .||+-|= +|-+..
T Consensus 172 ~~i~~~~~~w~~~~gvDGfR--lDa~~~ 197 (527)
T 1gcy_A 172 GMFRDEFTNLRSQYGAGGFR--FDFVRG 197 (527)
T ss_dssp HHHHHHHHHHHHHSCEEEEE--ESCGGG
T ss_pred HHHHHHHHHHHHhcCCCeEE--Eecccc
Confidence 788888888887 9999887 565554
No 108
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=59.61 E-value=23 Score=33.59 Aligned_cols=64 Identities=16% Similarity=0.274 Sum_probs=46.5
Q ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEecCC--------------C-----------------CCCCCCHHHHHHHHHHHHH
Q psy629 23 SVEEAEHLTGLISAAKEQGIDFYYALSPG--------------L-----------------DITYSSGKEVATLKRKLEQ 71 (166)
Q Consensus 23 p~~~l~~l~~L~~~a~~~~v~Fv~aisPG--------------~-----------------~~~~s~~~d~~~L~~K~~q 71 (166)
|...+++|++||++|+++||+.+.=+-+. . +++++++.-.+.|+.=+..
T Consensus 365 ~~~~~~efk~lV~~~H~~GI~VILDvV~NH~a~~~~~~~~~p~yy~~~~~dg~~~~~~~g~~ln~~~p~Vr~~i~d~l~~ 444 (877)
T 3faw_A 365 PSARIAELKQLIHDIHKRGMGVILDVVYNHTAKTYLFEDIEPNYYHFMNEDGSPRESFGGGRLGTTHAMSRRVLVDSIKY 444 (877)
T ss_dssp TTHHHHHHHHHHHHHHHTTCEEEEEECTTCCSCTHHHHTTSTTTSBCBCTTSCBCEETTEECBCTTSHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHcCCEEEEEEeeccccCccccccCCCceeeeeCCCCCeeccCCCcccccCCHHHHHHHHHHHHH
Confidence 33568999999999999999988876542 1 1233344556777777777
Q ss_pred HHH-cCCCeeEEecCCCC
Q psy629 72 VAQ-FGCRGFALLFDDIE 88 (166)
Q Consensus 72 l~~-lGvr~FailfDDi~ 88 (166)
..+ .||+-|= ||-+.
T Consensus 445 Wv~e~gVDGFR--fD~a~ 460 (877)
T 3faw_A 445 LTSEFKVDGFR--FDMMG 460 (877)
T ss_dssp HHHHHCCCEEE--ETTGG
T ss_pred HHHHcCCcEEE--EecCC
Confidence 777 8999988 66654
No 109
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=59.33 E-value=18 Score=29.89 Aligned_cols=47 Identities=17% Similarity=0.303 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDD 86 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDD 86 (166)
.+.+.++++..++.|+.+. ++||. + +. .+++.|.+.|++.+.|-++-
T Consensus 133 ~~~l~~ll~~ik~~g~~i~--~t~G~-l---~~-------e~l~~L~~aGvd~v~i~les 179 (369)
T 1r30_A 133 MPYLEQMVQGVKAMGLEAC--MTLGT-L---SE-------SQAQRLANAGLDYYNHNLDT 179 (369)
T ss_dssp HHHHHHHHHHHHHTTSEEE--EECSS-C---CH-------HHHHHHHHHCCCEEECCCBS
T ss_pred HHHHHHHHHHHHHcCCeEE--EecCC-C---CH-------HHHHHHHHCCCCEEeecCcC
Confidence 4566666777766676643 57764 1 12 24566677888888876664
No 110
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=59.24 E-value=22 Score=31.86 Aligned_cols=60 Identities=15% Similarity=0.294 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCC--------------------------CCCCCCCHHHHHHHHHHHHHHH-HcCCCe
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPG--------------------------LDITYSSGKEVATLKRKLEQVA-QFGCRG 79 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG--------------------------~~~~~s~~~d~~~L~~K~~ql~-~lGvr~ 79 (166)
.++|++||++|+++||+.+.=+-|. .+++|++++-.+.|+.-+.... +.||+-
T Consensus 192 ~~d~~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~w~~~ln~~~~~v~~~i~~~~~~W~~~~gvDG 271 (602)
T 2bhu_A 192 PEDLMALVDAAHRLGLGVFLDVVYNHFGPSGNYLSSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHFDG 271 (602)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCCHHHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHCCSE
T ss_pred HHHHHHHHHHHHHCCCEEEEEecccccccCCccccccCcccccCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCE
Confidence 6899999999999999998776431 1345666666677777666666 699999
Q ss_pred eEEecCCCC
Q psy629 80 FALLFDDIE 88 (166)
Q Consensus 80 FailfDDi~ 88 (166)
|= ||-+.
T Consensus 272 fR--~D~~~ 278 (602)
T 2bhu_A 272 LR--LDATP 278 (602)
T ss_dssp EE--ETTGG
T ss_pred EE--EechH
Confidence 87 66654
No 111
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=59.06 E-value=23 Score=31.99 Aligned_cols=61 Identities=20% Similarity=0.328 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCC-------------------------------------------------------
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPG------------------------------------------------------- 51 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG------------------------------------------------------- 51 (166)
+++|++|+++|+++||+.+.=+-+.
T Consensus 111 ~~df~~Lv~~aH~~GIkVilD~V~NHts~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~y~~~ 190 (680)
T 1cyg_A 111 LSDFQRLVDAAHAKGIKVIIDFAPNHTSPASETNPSYMENGRLYDNGTLLGGYTNDANMYFHHNGGTTFSSLEDGIYRNL 190 (680)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEETTEEEECSTTCTTCCBCCSCBCCCSSHHHHHSSBS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCCCCcccccCcchhhcCccccCcccccccCCCchhceecCCCCCcCCCccccccCc
Confidence 7899999999999999988755331
Q ss_pred ---CCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCC
Q psy629 52 ---LDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIES 89 (166)
Q Consensus 52 ---~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~ 89 (166)
.|+++++++-.+.|+.=+....+.||+-|= +|=+..
T Consensus 191 ~~~pDLn~~np~Vr~~i~~~~~~Wl~~GVDGfR--lDa~~~ 229 (680)
T 1cyg_A 191 FDLADLNHQNPVIDRYLKDAVKMWIDMGIDGIR--MDAVKH 229 (680)
T ss_dssp TTEEEBCTTSHHHHHHHHHHHHHHHTTTCCEEE--ESCGGG
T ss_pred CCCCccccCCHHHHHHHHHHHHHHHhCCCCEEE--Eecccc
Confidence 023344556667788878888889999887 565543
No 112
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=58.99 E-value=39 Score=28.63 Aligned_cols=61 Identities=30% Similarity=0.438 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCC---CCCCC--CHHHHHHHHHHHHHHHHcCCCeeEEecCCCCC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGL---DITYS--SGKEVATLKRKLEQVAQFGCRGFALLFDDIES 89 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~---~~~~s--~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~ 89 (166)
++.|++|+++|+++|++.+.=+-|.- +--|. .++-.+.++.=+..-.+.||+-|= +|.|..
T Consensus 81 ~~d~~~lv~~ah~~Gi~vilD~V~NH~s~~~wF~~q~~~Vr~~~~~~~~~Wl~~gvDGfR--lD~v~~ 146 (424)
T 2dh2_A 81 KEDFDSLLQSAKKKSIRVILDLTPNYRGENSWFSTQVDTVATKVKDALEFWLQAGVDGFQ--VRDIEN 146 (424)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTTTSSSTTCSSCHHHHHHHHHHHHHHHHHHTCCEEE--ECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCcCCCcccccccCHHHHHHHHHHHHHHHHcCCCEEE--Eecccc
Confidence 78999999999999999999997732 11222 234456667767766789999998 677664
No 113
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=58.89 E-value=38 Score=28.34 Aligned_cols=61 Identities=21% Similarity=0.231 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCC-------------------------------------------------------
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPG------------------------------------------------------- 51 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG------------------------------------------------------- 51 (166)
.++|++|+++|+++||+.+.=+-|.
T Consensus 68 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (405)
T 1ht6_A 68 AAELKSLIGALHGKGVQAIADIVINHRCADYKDSRGIYCIFEGGTSDGRLDWGPHMICRDDTKYSDGTANLDTGADFAAA 147 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCCSEECTTSCEEECCCSSSSSTTCCCGGGBCTTCTTTCCSCSCCCSSCCCTTS
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCcccCCCCCCCCCcccCCCCCcCCCCCCCCccccCCCCCcCCCCCcccCCCCcCcC
Confidence 6899999999999999977522110
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHH-cCCCeeEEecCCCCC
Q psy629 52 LDITYSSGKEVATLKRKLEQVAQ-FGCRGFALLFDDIES 89 (166)
Q Consensus 52 ~~~~~s~~~d~~~L~~K~~ql~~-lGvr~FailfDDi~~ 89 (166)
.++++++++-.+.|+.=+..+.+ .||+-|= +|-+..
T Consensus 148 ~dln~~~p~v~~~i~~~~~~w~~~~gvDGfR--~D~~~~ 184 (405)
T 1ht6_A 148 PDIDHLNDRVQRELKEWLLWLKSDLGFDAWR--LDFARG 184 (405)
T ss_dssp CBBCTTCHHHHHHHHHHHHHHHHHHCCCEEE--ETTGGG
T ss_pred CccCcCCHHHHHHHHHHHHHHHhccCCCEEE--Eecccc
Confidence 12334556667777777777777 9999887 666653
No 114
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=58.85 E-value=58 Score=24.87 Aligned_cols=63 Identities=30% Similarity=0.405 Sum_probs=38.7
Q ss_pred hcc-CCCHHHHHHHHHHHHHHHHCCCeE-EEEecCCCCCCCCC--H----HHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 18 WRD-LYSVEEAEHLTGLISAAKEQGIDF-YYALSPGLDITYSS--G----KEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 18 Wre-~Yp~~~l~~l~~L~~~a~~~~v~F-v~aisPG~~~~~s~--~----~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
|+. ..++++ ++++.+.++++|+++ .+++|.+..+++.+ + +.++.+.+-++....+|++...+.
T Consensus 39 ~~~~~~~~~~---~~~~~~~l~~~gl~~~~~~~h~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lG~~~v~~~ 109 (287)
T 2x7v_A 39 WSAKLPSDEA---ATKFKREMKKHGIDWENAFCHSGYLINLASPKDDIWQKSVELLKKEVEICRKLGIRYLNIH 109 (287)
T ss_dssp SCCCCCCHHH---HHHHHHHHHHHTCCGGGEEEECCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred ccccCCCHHH---HHHHHHHHHHcCCCcceeEEecccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 443 334444 455556677889985 13334333345543 2 346677888888889999998764
No 115
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=58.34 E-value=22 Score=28.72 Aligned_cols=29 Identities=17% Similarity=0.175 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 22 YSVEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 22 Yp~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
+.++.++.|+++++.|+++|+..+..+|-
T Consensus 71 ~~~~~~~~ld~~v~~a~~~Gi~vildlh~ 99 (341)
T 1vjz_A 71 IREDFFEKIDRVIFWGEKYGIHICISLHR 99 (341)
T ss_dssp CCGGGHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 56778999999999999999999999983
No 116
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=58.32 E-value=32 Score=28.45 Aligned_cols=54 Identities=20% Similarity=0.320 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC-HHHHHHHHHHHHHHHHcCCCee
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSS-GKEVATLKRKLEQVAQFGCRGF 80 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~-~~d~~~L~~K~~ql~~lGvr~F 80 (166)
++-++.|++.++.|.+.||. -.-|=||..+ +. .++--.|++.++.+.++|+.-+
T Consensus 173 ~ev~~~l~~~i~~a~~~Gi~-~IilDPG~Gf--~kt~~~n~~ll~~l~~~~~~g~Pvl 227 (294)
T 2dqw_A 173 AEVKAFLEAQARRALSAGVP-QVVLDPGFGF--GKLLEHNLALLRRLDEIVALGHPVL 227 (294)
T ss_dssp HHHHHHHHHHHHHHHHTTCS-CEEEECCTTS--SCCHHHHHHHHHTHHHHHTTSSCBE
T ss_pred HHHHHHHHHHHHHHHHCCCC-cEEEcCCCCc--ccCHHHHHHHHHHHHHHhcCCCCEE
Confidence 66789999999999999999 8888898864 43 4566788899999999987653
No 117
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=57.31 E-value=31 Score=31.07 Aligned_cols=34 Identities=18% Similarity=0.307 Sum_probs=26.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 53 DITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 53 ~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
++++++++-.+.|+.-+....+.||+-|= +|-+.
T Consensus 256 dLN~~np~V~~~i~~~l~~w~~~GvDGfR--lDa~~ 289 (628)
T 1g5a_A 256 DLNYSNPWVFRAMAGEMLFLANLGVDILR--MDAVA 289 (628)
T ss_dssp EBCTTSHHHHHHHHHHHHHHHTTTCSEEE--ETTGG
T ss_pred ccCCCCHHHHHHHHHHHHHHHHcCCCEEE--Eeccc
Confidence 35677777788888888888899999988 45444
No 118
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=56.79 E-value=6.4 Score=33.01 Aligned_cols=57 Identities=19% Similarity=0.236 Sum_probs=37.2
Q ss_pred HHHHHHHHH-CCCeEEEEecCCCCCCCCCHHHHH----HHHHHHHHHHHcCCCe-eEEecCCCC
Q psy629 31 TGLISAAKE-QGIDFYYALSPGLDITYSSGKEVA----TLKRKLEQVAQFGCRG-FALLFDDIE 88 (166)
Q Consensus 31 ~~L~~~a~~-~~v~Fv~aisPG~~~~~s~~~d~~----~L~~K~~ql~~lGvr~-FailfDDi~ 88 (166)
..|++.|++ .+-..|++|.|- ...|...+|+. .+-+|++.|.++||+. |..-|+++.
T Consensus 49 ~sLI~~A~~~~a~~vVvSffvn-P~qF~~~ed~~~yprtle~d~~lL~~~GVD~vf~p~~~~my 111 (301)
T 3cov_A 49 LALVRAAKRVPGSVVVVSIFVN-PMQFGAGGDLDAYPRTPDDDLAQLRAEGVEIAFTPTTAAMY 111 (301)
T ss_dssp HHHHHHHHTSTTEEEEEEECCC-GGGCCSSSHHHHSCCCHHHHHHHHHHTTCCEEECCCHHHHC
T ss_pred HHHHHHHHHhcCCEEEEEEcCC-hhhcCCccccccCCCCHHHHHHHHHhCCCCEEEeCCHHHCC
Confidence 457777777 555667777662 22233334444 4788999999999997 665566554
No 119
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=56.78 E-value=54 Score=24.91 Aligned_cols=54 Identities=17% Similarity=0.247 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHH----HHHHHHHHHHHHHHcCCCeeEEe
Q psy629 28 EHLTGLISAAKEQGIDFYYALSPGLDITYSSGK----EVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~----d~~~L~~K~~ql~~lGvr~Fail 83 (166)
..++++.+..++.|+.+. +++++.++. +.++ .++.+.+-++....+|++...+.
T Consensus 47 ~~~~~~~~~l~~~gl~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~ 104 (281)
T 3u0h_A 47 HGDAAVEAMFQRRGLVLA-NLGLPLNLY-DSEPVFLRELSLLPDRARLCARLGARSVTAF 104 (281)
T ss_dssp HCHHHHHHHHHTTTCEEC-CEECCSCTT-SCHHHHHHHHHTHHHHHHHHHHTTCCEEEEE
T ss_pred cCHHHHHHHHHHcCCceE-Eeccccccc-CCCHHHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 347788888999999975 677654432 2222 34566777888889999998754
No 120
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=56.58 E-value=57 Score=27.64 Aligned_cols=59 Identities=10% Similarity=-0.070 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCC
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDI 87 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi 87 (166)
-|+.|++..++.|++|+.=+.||...|-..+..+.-...-++.+.+.||+.|=+=|-..
T Consensus 75 Gl~~l~~~i~~~Glk~Giw~~pg~~tc~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~~~ 133 (397)
T 3a5v_A 75 GIKPLVDDIHNLGLKAGIYSSAGTLTCGGHIASLGYEDIDAKTWAKWGIDYLKYDNCYN 133 (397)
T ss_dssp CHHHHHHHHHHTTCEEEEEEESSSBCTTSCBCCTTCHHHHHHHHHHHTCCEEEEECTTC
T ss_pred CHHHHHHHHHHcCCEEEEEecCCCCccCCCHHHHHHHHHHHHHHHHcCCCEEEECCCcC
Confidence 59999999999999999999998532211100000000114678899999988655433
No 121
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=56.36 E-value=22 Score=30.74 Aligned_cols=60 Identities=10% Similarity=0.097 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCC
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESE 90 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~ 90 (166)
-|+.|++..++.|++|+.=+.||...|-..+..+.-...=++++.+-||+-+= +|.+...
T Consensus 85 Gl~~l~~~ih~~Glk~Giw~~~g~~tC~~~pGs~~~~~~da~~fa~WGvDylK--~D~C~~~ 144 (404)
T 3hg3_A 85 GIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLK--FAGCYCD 144 (404)
T ss_dssp HHHHHHHHHHHTTCEEEEEEESSSBCTTSSBCCTTCHHHHHHHHHHHTCCEEE--EECCSCS
T ss_pred CHHHHHHHHHHCCCeeEEEecCCccccCCCCccHHHHHHHHHHHHHhCCcEEE--ecCcCCC
Confidence 69999999999999999999999876632111011111123567899999877 6776644
No 122
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=56.28 E-value=27 Score=26.56 Aligned_cols=53 Identities=15% Similarity=0.224 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEe-cCC---CCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 26 EAEHLTGLISAAKEQGIDFYYAL-SPG---LDITYSSGKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~ai-sPG---~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
-.+.|+++++.|++.||++.+=- +|. ......+.++...|++.+ |- .+++.+|
T Consensus 121 ~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~~~~~~~~l~~~~------~~-~vg~~~D 177 (275)
T 3qc0_A 121 VVEGIAAVLPHARAAGVPLAIEPLHPMYAADRACVNTLGQALDICETL------GP-GVGVAID 177 (275)
T ss_dssp HHHHHHHHHHHHHHHTCCEEECCCCGGGTTTTBSCCCHHHHHHHHHHH------CT-TEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEeECCCcccCCccccCCHHHHHHHHHHh------Cc-ccEEEEE
Confidence 35789999999999999865542 221 112233556666665554 44 5777776
No 123
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=56.25 E-value=32 Score=26.63 Aligned_cols=120 Identities=11% Similarity=0.145 Sum_probs=60.0
Q ss_pred HHHHHHHCCCeEEEEecC--CC--CCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCCCHHHHHHHhhHHH----
Q psy629 33 LISAAKEQGIDFYYALSP--GL--DITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESEMSEADKEVFQSFAH---- 104 (166)
Q Consensus 33 L~~~a~~~~v~Fv~aisP--G~--~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~~~~d~~~f~~~a~---- 104 (166)
+++..++.|+.+|.-=++ +. .+.+-..+..+....=.+.|.+.|.|.++++...-.......=.+.|.....
T Consensus 83 ~~~~l~~~~iPvV~i~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~ 162 (295)
T 3hcw_A 83 IKQMLIDESMPFIVIGKPTSDIDHQFTHIDNDNILASENLTRHVIEQGVDELIFITEKGNFEVSKDRIQGFETVASQFNL 162 (295)
T ss_dssp HHHHHHHTTCCEEEESCCCSSGGGGSCEEEECHHHHHHHHHHHHHHHCCSEEEEEEESSCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCEEEECCCCccccCCceEEecCcHHHHHHHHHHHHHcCCccEEEEcCCccchhHHHHHHHHHHHHHHcCC
Confidence 445566778888765443 22 1211111234455555667888999999998754332211111222322110
Q ss_pred ------------HHHHHHHHHHHHcC---CCCceEccccccccccCCCCCChhHHHHHhhccCCCceEE
Q psy629 105 ------------AQVSVTNEVFEHLG---QPKFMLCPTQYCSTRAVPNVKNSEYLNTLGSKLAKEIDIM 158 (166)
Q Consensus 105 ------------aq~~l~n~v~~~l~---~~~l~~cPt~Y~~~~~~~~~~~~~Yl~~l~~~L~~~i~i~ 158 (166)
.-...+.++.+..+ .+.-+||......-. --..++++|-..|.+|.|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ai~~~~d~~A~g------~~~al~~~g~~vP~di~vi 225 (295)
T 3hcw_A 163 DYQIIETSNEREVILNYMQNLHTRLKDPNIKQAIISLDAMLHLA------ILSVLYELNIEIPKDVMTA 225 (295)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHTCTTSCEEEEESSHHHHHH------HHHHHHHTTCCTTTTEEEE
T ss_pred CeeEEeccCCHHHHHHHHHHHHhhcccCCCCcEEEECChHHHHH------HHHHHHHcCCCCCCceEEE
Confidence 00112333333332 334667755432211 2456777777777888775
No 124
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=55.92 E-value=19 Score=27.52 Aligned_cols=50 Identities=4% Similarity=-0.104 Sum_probs=31.9
Q ss_pred HHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCC
Q psy629 38 KEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDI 87 (166)
Q Consensus 38 ~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi 87 (166)
.+.|+.+|.-=++..++.+-..+..+....=.+.|.+.|.|.++++..+-
T Consensus 88 ~~~~iPvV~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~i~~i~~~~ 137 (289)
T 3g85_A 88 ASLTLPIILFNRLSNKYSSVNVDNYKMGEKASLLFAKKRYKSAAAILTES 137 (289)
T ss_dssp CCCSSCEEEESCCCSSSEEEEECHHHHHHHHHHHHHHTTCCBCEEEECCC
T ss_pred ccCCCCEEEECCCCCCCCEEEeCHHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 46789988766553332211112345555556778889999999997663
No 125
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=55.89 E-value=36 Score=26.39 Aligned_cols=56 Identities=9% Similarity=0.059 Sum_probs=33.2
Q ss_pred HHHHHHHCCCeEEEEecCCC--CCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 33 LISAAKEQGIDFYYALSPGL--DITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 33 L~~~a~~~~v~Fv~aisPG~--~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
.++..++.|+.+|.-=++-. .+.+=..+..+.-..=.+.|.+.|.|.++++-.+-.
T Consensus 98 ~~~~l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~~~ 155 (305)
T 3huu_A 98 IEHLLNEFKVPYLIVGKSLNYENIIHIDNDNIDAAYQLTQYLYHLGHRHILFLQESGH 155 (305)
T ss_dssp HHHHHHHTTCCEEEESCCCSSTTCCEEECCHHHHHHHHHHHHHHTTCCSEEEEEESSC
T ss_pred HHHHHHHcCCCEEEECCCCcccCCcEEEeCHHHHHHHHHHHHHHCCCCeEEEEcCCcc
Confidence 44556677888776554421 121111123345555567788999999999866543
No 126
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=55.84 E-value=23 Score=31.94 Aligned_cols=34 Identities=18% Similarity=0.399 Sum_probs=26.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 53 DITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 53 ~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
++++.+++-.+.|+.-+....+.||+-|= +|-+.
T Consensus 250 dLN~~np~V~~~i~~~~~~wl~~GvDGfR--lDa~~ 283 (644)
T 3czg_A 250 DLNWSNPAVFGDMALAMLRLANLGVEAFR--LDSTA 283 (644)
T ss_dssp EBCTTSHHHHHHHHHHHHHHHHTTEEEEE--EETGG
T ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCCEEE--Eeccc
Confidence 45677778888888888888899999987 45444
No 127
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=55.55 E-value=28 Score=28.29 Aligned_cols=55 Identities=22% Similarity=0.219 Sum_probs=41.1
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCC-----------------------CCCCCHHHHHHHHHHHHHHHHc
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALSPGLD-----------------------ITYSSGKEVATLKRKLEQVAQF 75 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~-----------------------~~~s~~~d~~~L~~K~~ql~~l 75 (166)
.|.++.++.|.++++.|+++||..+..||-+.. ..|++++-.+...+-+++|.+-
T Consensus 78 ~~~~~~~~~ld~~i~~a~~~Gi~vil~l~~~~~~~gg~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~r 155 (373)
T 1rh9_A 78 VYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTR 155 (373)
T ss_dssp EECHHHHHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHHHTTCCCCCGGGGGTCHHHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEEEecccccccCChHHHHHHHhhcCCCCCchhhcccCHHHHHHHHHHHHHHHhc
Confidence 477889999999999999999999999875211 1345555566666667777664
No 128
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=55.31 E-value=85 Score=25.66 Aligned_cols=29 Identities=14% Similarity=-0.043 Sum_probs=25.8
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 22 YSVEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 22 Yp~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
+.++.++.|+++++.|+++|+..+.-+|-
T Consensus 84 ~~~~~l~~ld~~v~~a~~~Gi~VIld~H~ 112 (364)
T 1g01_A 84 TNPEVKDLVYEGIELAFEHDMYVIVDWHV 112 (364)
T ss_dssp TCTTHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 44667899999999999999999999984
No 129
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=55.01 E-value=21 Score=29.73 Aligned_cols=73 Identities=16% Similarity=0.089 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCCCHHHHHHHhhHHHHHH
Q psy629 28 EHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESEMSEADKEVFQSFAHAQV 107 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~~~~d~~~f~~~a~aq~ 107 (166)
+++++.++.+++.|+.+.+.++=. .. ++ .+.+.+-.+.+.+.|+..++ +=|.-+...+.+ -.
T Consensus 120 ~~~~~~i~~ak~~G~~v~~~~~~a--~~-~~---~e~~~~ia~~~~~~Ga~~i~--l~DT~G~~~P~~----------v~ 181 (345)
T 1nvm_A 120 DVSKQHIEYARNLGMDTVGFLMMS--HM-IP---AEKLAEQGKLMESYGATCIY--MADSGGAMSMND----------IR 181 (345)
T ss_dssp GGGHHHHHHHHHHTCEEEEEEEST--TS-SC---HHHHHHHHHHHHHHTCSEEE--EECTTCCCCHHH----------HH
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeC--CC-CC---HHHHHHHHHHHHHCCCCEEE--ECCCcCccCHHH----------HH
Confidence 567889999999999999998311 01 12 35566666777788999766 456665554432 23
Q ss_pred HHHHHHHHHcC
Q psy629 108 SVTNEVFEHLG 118 (166)
Q Consensus 108 ~l~n~v~~~l~ 118 (166)
+++..|.+..+
T Consensus 182 ~lv~~l~~~~~ 192 (345)
T 1nvm_A 182 DRMRAFKAVLK 192 (345)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHhcC
Confidence 45566666664
No 130
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=54.51 E-value=45 Score=30.42 Aligned_cols=62 Identities=15% Similarity=0.218 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecCC----------------------------------CCCCCCCHHHHHHHHHHHH
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALSPG----------------------------------LDITYSSGKEVATLKRKLE 70 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~aisPG----------------------------------~~~~~s~~~d~~~L~~K~~ 70 (166)
..+++|++||++|+++||+.+.=+-+. .++++.+++-.+.|+.=+.
T Consensus 313 ~~~~dfk~LV~~aH~~GI~VIlDvV~NHt~~~~~~~f~~~~p~y~~~~~~~g~~~n~~~~g~dln~~np~Vr~~i~d~~~ 392 (718)
T 2e8y_A 313 TRKTELKQMINTLHQHGLRVILDVVFNHVYKRENSPFEKTVPGYFFRHDECGKPSNGTGVGNDIASERRMARKFIADCVV 392 (718)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECTTCCSSGGGSHHHHHSTTTSBCBCTTSSBCCTTSSSCCBCTTSHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHCCCEEEEEEecccccCcccccccccCCCeEEecCCCCcccCCCCcccccccCCHHHHHHHHHHHH
Confidence 458999999999999999988765331 1344555666677777777
Q ss_pred HHHH-cCCCeeEEecCCCC
Q psy629 71 QVAQ-FGCRGFALLFDDIE 88 (166)
Q Consensus 71 ql~~-lGvr~FailfDDi~ 88 (166)
...+ .||+-|= ||=+.
T Consensus 393 ~Wl~e~gVDGfR--~D~~~ 409 (718)
T 2e8y_A 393 YWLEEYNVDGFR--FDLLG 409 (718)
T ss_dssp HHHHHHCCCEEE--ETTGG
T ss_pred HHHHHhCCCEEE--Eeccc
Confidence 7666 8999887 66664
No 131
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=54.02 E-value=17 Score=27.76 Aligned_cols=48 Identities=17% Similarity=0.187 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
-.+.|+++++.|++.||.+++=-+++. +.+++..|++.+ | ..+++.||
T Consensus 115 ~~~~l~~l~~~a~~~gv~l~lEn~~~~-----~~~~~~~l~~~v------~-~~vg~~~D 162 (254)
T 3ayv_A 115 LAEALGLVVRRARTLGVRLLLENSHEP-----HPEALRPVLEAH------A-GELGFCFD 162 (254)
T ss_dssp HHHHTHHHHHHHHHHTCEEEEECSSCS-----SGGGTHHHHHHH------T-TSSEEEEE
T ss_pred HHHHHHHHHHHHhhcCCEEEEcCCCCC-----CHHHHHHHHHhc------C-cCEEEEEE
Confidence 357889999999999998877666653 334555555443 4 56677764
No 132
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=53.81 E-value=58 Score=26.52 Aligned_cols=50 Identities=22% Similarity=0.343 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCH------HHHHHHHHHHHHHHHcCCC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGLDITYSSG------KEVATLKRKLEQVAQFGCR 78 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~------~d~~~L~~K~~ql~~lGvr 78 (166)
.+.++++.+.++++|++. .+||...++.+|. ..++.|..=++....+|+.
T Consensus 102 ~~~~~~~~~~~~~~gi~i--~~H~py~iNL~S~~~e~re~Si~~l~~~l~~a~~lG~~ 157 (301)
T 2j6v_A 102 EEELARLGALARAFGQRL--SMHPGQYVNPGSPDPEVVERSLAELRYSARLLSLLGAE 157 (301)
T ss_dssp HHHHHHHHHHHHHTTCEE--EECCCTTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHcCCeE--EEeCchhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 367777778888999874 5688888888762 3567888888999999976
No 133
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=52.18 E-value=38 Score=25.64 Aligned_cols=57 Identities=12% Similarity=0.081 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecCCCC-CCCCCHHHHHHHHHHHHHHHH----cCCCeeEE
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSPGLD-ITYSSGKEVATLKRKLEQVAQ----FGCRGFAL 82 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~-~~~s~~~d~~~L~~K~~ql~~----lGvr~Fai 82 (166)
++.++.+++.++.|++.|++.+ .++||.. -.++.++.++.+...|.++.+ .||+ ++|
T Consensus 81 ~~~~~~~~~~i~~a~~lG~~~v-~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~~ 142 (260)
T 1k77_A 81 HEAHADIDLALEYALALNCEQV-HVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKR-ILV 142 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEE-ECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHGGGTCE-EEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEE-EECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCE-EEE
Confidence 4567899999999999999987 4677763 234445666666666666553 5774 454
No 134
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=52.07 E-value=36 Score=30.88 Aligned_cols=33 Identities=15% Similarity=0.122 Sum_probs=24.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 54 ITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 54 ~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
+++++++-.+.|+.=+....+.||+-|=+ |-+.
T Consensus 413 LN~~np~Vr~~i~~~~~~Wl~~GvDGfRl--Daa~ 445 (696)
T 4aee_A 413 FNHDNPRTVDYFIDITKFWIDKGIDGFRI--DVAM 445 (696)
T ss_dssp BCTTCHHHHHHHHHHHHHHHTTTCCEEEE--TTGG
T ss_pred hcCCCHHHHHHHHHHHHHHHhCCCCEEEE--echh
Confidence 34556666778888888777999999884 5554
No 135
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=52.02 E-value=18 Score=27.71 Aligned_cols=49 Identities=10% Similarity=-0.019 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
.++++++.|++.||++.+=-+|+..+ +.+.+++..|+ +.+...+++.+|
T Consensus 116 ~~~~l~~~a~~~gv~l~~En~~~~~~-~~~~~~~~~ll-------~~~~~~~g~~~D 164 (262)
T 3p6l_A 116 DWDLVEKLSKQYNIKISVHNHPQPSD-YWKPENLLKAI-------SGRSQSLGSCSD 164 (262)
T ss_dssp GHHHHHHHHHHHTCEEEEECCSSSSS-SSSHHHHHHHH-------TTSCTTEEEEEE
T ss_pred HHHHHHHHHHHhCCEEEEEeCCCccc-cCCHHHHHHHH-------HhCCCceEEEec
Confidence 34677777888888777666665332 23333333332 224556777775
No 136
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=52.01 E-value=13 Score=31.94 Aligned_cols=56 Identities=11% Similarity=0.099 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHH--HHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 28 EHLTGLISAAKEQGIDFYYALSPGLDITYSSGK--EVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~--d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
.-|+.|++..++.|++|+.=+.||-+.|...+. ....+ -++.+.+-||+.+=+=|-
T Consensus 77 ~Gl~~l~~~i~~~Glk~Giw~~~g~~~c~~~Pgs~~~~~~--d~~~~~~wGvdylK~D~~ 134 (417)
T 1szn_A 77 DGIDGLAKKVHALGLKLGIYSTAGTATCAGYPASLGYEDV--DAADFADWGVDYLKYDNC 134 (417)
T ss_dssp THHHHHHHHHHHTTCEEEEEEESSSBCTTSCBCCTTCHHH--HHHHHHHTTCCEEEEECC
T ss_pred cCHHHHHHHHHHcCCEEEEEeCCCCchhccCcchHhHHHH--HHHHHHHcCCCEEEECCC
Confidence 369999999999999999989998776554211 11111 266788999998875443
No 137
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=51.44 E-value=54 Score=24.82 Aligned_cols=122 Identities=8% Similarity=-0.019 Sum_probs=63.8
Q ss_pred HHHHHHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCCC-HHHHHHHhh------
Q psy629 31 TGLISAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESEMS-EADKEVFQS------ 101 (166)
Q Consensus 31 ~~L~~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~~-~~d~~~f~~------ 101 (166)
.+.++.+++.|+.+|.-=++ +..+.+-.....+.-..=.+.|.+.|.|.++++..+-..... ..=.+.|..
T Consensus 75 ~~~~~~l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~~R~~gf~~~l~~~~ 154 (276)
T 3jy6_A 75 PQTVQEILHQQMPVVSVDREMDACPWPQVVTDNFEAAKAATTAFRQQGYQHVVVLTSELELSRTRQERYRGILAAAQDVD 154 (276)
T ss_dssp HHHHHHHHTTSSCEEEESCCCTTCSSCEEECCHHHHHHHHHHHHHTTTCCEEEEEEECSTTCHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHCCCCEEEEecccCCCCCCEEEEChHHHHHHHHHHHHHcCCCeEEEEecCCCCCchHHHHHHHHHHHHHhCC
Confidence 34566777789988876553 222221111234555555667888999999999765442211 111222321
Q ss_pred ----------HHHHHHHHHHHHHHHcCCCCceEccccccccccCCCCCChhHHHHHhhccCCCceEEe
Q psy629 102 ----------FAHAQVSVTNEVFEHLGQPKFMLCPTQYCSTRAVPNVKNSEYLNTLGSKLAKEIDIMW 159 (166)
Q Consensus 102 ----------~a~aq~~l~n~v~~~l~~~~l~~cPt~Y~~~~~~~~~~~~~Yl~~l~~~L~~~i~i~W 159 (166)
...+...+.+.+ +..+.+.-+||......-. --..++++|-..|.+|.|+=
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~ai~~~~d~~a~g------~~~al~~~g~~vP~di~vig 215 (276)
T 3jy6_A 155 VLEVSESSYNHSEVHQRLTQLI-TQNDQKTVAFALKERWLLE------FFPNLIISGLIDNQTVTATG 215 (276)
T ss_dssp EEEECSSSCCHHHHHHHHHHHH-HSSSSCEEEEESSHHHHHH------HSHHHHHSSSCCSSSEEEEE
T ss_pred cEEEeccccCCcHHHHHHHHHH-hcCCCCcEEEEeCcHHHHH------HHHHHHHcCCCCCCcEEEEE
Confidence 011111222222 2223344677765543322 23567888877788887763
No 138
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=51.42 E-value=33 Score=28.97 Aligned_cols=59 Identities=19% Similarity=0.219 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCC----------------------------------CCCCCCCHHHHHHHHHHHHHH
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPG----------------------------------LDITYSSGKEVATLKRKLEQV 72 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG----------------------------------~~~~~s~~~d~~~L~~K~~ql 72 (166)
.++|++|+++|+++||+.+.=+-|. .++++++++-.+.|+.=+..+
T Consensus 83 ~~~~~~lv~~~h~~Gi~vi~D~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~dLn~~np~Vr~~l~~~l~~w 162 (449)
T 3dhu_A 83 LADFKALTDRAHELGMKVMLDIVYNHTSPDSVLATEHPEWFYHDADGQLTNKVGDWSDVKDLDYGHHELWQYQIDTLLYW 162 (449)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEECTTSHHHHHCGGGBCBCTTSCBCCSSTTCTTCEEBCTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCcCcCccchhhcCccceEECCCCCcCCCCCCCCCCCccCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999998866441 124556677777888888888
Q ss_pred HHcCCCeeEEecCCCC
Q psy629 73 AQFGCRGFALLFDDIE 88 (166)
Q Consensus 73 ~~lGvr~FailfDDi~ 88 (166)
.+. |+-|= +|-+.
T Consensus 163 ~~~-vDGfR--lDaa~ 175 (449)
T 3dhu_A 163 SQF-VDGYR--CDVAP 175 (449)
T ss_dssp TTT-CSEEE--ETTGG
T ss_pred HHh-CCEEE--EEChh
Confidence 888 88777 45443
No 139
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=51.22 E-value=25 Score=26.78 Aligned_cols=55 Identities=22% Similarity=0.222 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCCCCC---CCHHHHHHHHHHHHHHHH----cCCCeeEE
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLDITY---SSGKEVATLKRKLEQVAQ----FGCRGFAL 82 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~---s~~~d~~~L~~K~~ql~~----lGvr~Fai 82 (166)
.++.+++.++.|++.|++.+ .+|||..-.- +.++.++.+...|..+.+ .||+ ++|
T Consensus 74 ~~~~~~~~i~~A~~lGa~~v-~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~l 135 (254)
T 3ayv_A 74 TLRRLLFGLDRAAELGADRA-VFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGVR-LLL 135 (254)
T ss_dssp HHHHHHHHHHHHHHTTCSEE-EEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTCE-EEE
T ss_pred HHHHHHHHHHHHHHhCCCEE-EECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCCE-EEE
Confidence 36789999999999999987 4678754321 123445666666665554 5874 444
No 140
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=51.16 E-value=52 Score=24.76 Aligned_cols=54 Identities=4% Similarity=-0.119 Sum_probs=29.5
Q ss_pred HHHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCC
Q psy629 34 ISAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDI 87 (166)
Q Consensus 34 ~~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi 87 (166)
++.+++.|+.+|.-=++ +..+.+-.....+.-..=.+.|.+.|.+.++++..+-
T Consensus 75 ~~~l~~~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G~~~i~~i~~~~ 130 (275)
T 3d8u_A 75 HQLLEASNTPVLEIAELSSKASYLNIGVDHFEVGKACTRHLIEQGFKNVGFIGARG 130 (275)
T ss_dssp HHHHHHHTCCEEEESSSCSSSSSEEECBCHHHHHHHHHHHHHTTTCCCEEEEECSC
T ss_pred HHHHHhCCCCEEEEeeccCCCCCCEEEEChHHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 34455668887764332 2121111111233444445678888999999987543
No 141
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=50.97 E-value=17 Score=29.01 Aligned_cols=27 Identities=7% Similarity=0.244 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
++.++.|.++++.|++.||..+..+|.
T Consensus 86 ~~~~~~ld~~i~~a~~~Gi~vild~~~ 112 (344)
T 1qnr_A 86 ADGLQTLDYVVQSAEQHNLKLIIPFVN 112 (344)
T ss_dssp TTTTHHHHHHHHHHHHHTCEEEEESCB
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 667999999999999999999999974
No 142
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=50.48 E-value=39 Score=30.85 Aligned_cols=63 Identities=13% Similarity=0.242 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecCC--------------C-----------------CCCCCCHHHHHHHHHHHHHH
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSPG--------------L-----------------DITYSSGKEVATLKRKLEQV 72 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisPG--------------~-----------------~~~~s~~~d~~~L~~K~~ql 72 (166)
....++|++||++|+++||+.+.=+-+. . +++.++.+-.+.|+.=+...
T Consensus 251 ~~~~~efk~lV~~~H~~Gi~VilDvV~NH~~~~~~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~v~~~i~d~l~~W 330 (714)
T 2ya0_A 251 EKRIAEFKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKYL 330 (714)
T ss_dssp THHHHHHHHHHHHHHHTTCEEEEEECTTBCSCHHHHHTTSTTTSBCBCTTCCBCEETTEEBBCTTSHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHCCCEEEEEeccCcccCcccccccCCCeeEEeCCCCCCccccCCCCcccCCHHHHHHHHHHHHHH
Confidence 3458999999999999999998876542 1 12222345566667666666
Q ss_pred HH-cCCCeeEEecCCCC
Q psy629 73 AQ-FGCRGFALLFDDIE 88 (166)
Q Consensus 73 ~~-lGvr~FailfDDi~ 88 (166)
.+ .||+-|= ||-+.
T Consensus 331 ~~e~~vDGfR--~D~~~ 345 (714)
T 2ya0_A 331 VDTYKVDGFR--FDMMG 345 (714)
T ss_dssp HHHHCCCEEE--ETTGG
T ss_pred HHhhCceEEE--EeCCC
Confidence 65 8999887 66654
No 143
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=50.43 E-value=1.1e+02 Score=28.41 Aligned_cols=66 Identities=14% Similarity=0.055 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCCCC-C-CCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCCCHH
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGLDI-T-YSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESEMSEA 94 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~~~-~-~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~~~~ 94 (166)
++.++..++.+++.|....++++=+.++ + +...-+.+-+++-++++.++|++.++ +=|.-+.+.+.
T Consensus 223 l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~--l~DT~G~~~P~ 290 (718)
T 3bg3_A 223 LPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILC--IKDMAGLLKPT 290 (718)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEE--EECTTSCCCHH
T ss_pred HHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEE--EcCcCCCcCHH
Confidence 6789999999999998888888754332 1 11112567788888899999999776 55777666543
No 144
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=50.07 E-value=38 Score=25.74 Aligned_cols=55 Identities=16% Similarity=0.256 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCCCCCCCCH----HHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGLDITYSSG----KEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~----~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
.++++.+..++.|+.+. +++|+.++.-.++ +.++.+.+-++....+|++...+..
T Consensus 46 ~~~~~~~~l~~~gl~~~-~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~ 104 (275)
T 3qc0_A 46 GLGEAGRIVRANGLKLT-GLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCLVLVA 104 (275)
T ss_dssp CHHHHHHHHHHHTCEES-CEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEEEEC
T ss_pred CHHHHHHHHHHcCCceE-EeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEee
Confidence 34555555566666543 3444333333332 2344555555556666666666554
No 145
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=49.94 E-value=80 Score=24.15 Aligned_cols=53 Identities=13% Similarity=0.164 Sum_probs=31.4
Q ss_pred HHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 35 SAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 35 ~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
+...+ |+.+|.-=++ +..+.+-..+..+....=.+.|.+.|.|.++++-..-.
T Consensus 83 ~~~~~-~iPvV~i~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~~~~~ 137 (289)
T 3k9c_A 83 GALAD-RVPALVVARASGLPGVGAVRGDDVAGITLAVDHLTELGHRNIAHIDGADA 137 (289)
T ss_dssp HHHHT-TSCEEEESSCCSSTTSEEEEECHHHHHHHHHHHHHHTTCCSEEEECCTTS
T ss_pred HHHHc-CCCEEEEcCCCCCCCCCEEEeChHHHHHHHHHHHHHCCCCcEEEEeCCCC
Confidence 33444 8888765443 22222111123455555567788899999999976653
No 146
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=49.73 E-value=65 Score=24.32 Aligned_cols=53 Identities=8% Similarity=-0.031 Sum_probs=28.3
Q ss_pred HHHHH-CCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCC
Q psy629 35 SAAKE-QGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDI 87 (166)
Q Consensus 35 ~~a~~-~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi 87 (166)
+..++ .|+.+|.-=++ +..+.+-.....+.-..=.+.|.+.|.+.++++..+-
T Consensus 94 ~~l~~~~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~l~~~G~~~I~~i~~~~ 149 (296)
T 3brq_A 94 DDIIDAHSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAGHQEIAFLTGSM 149 (296)
T ss_dssp HHHHHTCSSCEEEESCCCSSSGGGEECCCHHHHHHHHHHHHHHTTCCSEEEECCCT
T ss_pred HHHHhcCCCCEEEEccccCCCCCCEEEEchHHHHHHHHHHHHHCCCceEEEEcCCC
Confidence 34455 78887765432 2211110111223333334667788999999987653
No 147
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=49.66 E-value=74 Score=24.30 Aligned_cols=54 Identities=7% Similarity=0.020 Sum_probs=29.8
Q ss_pred HHHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCC
Q psy629 34 ISAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDI 87 (166)
Q Consensus 34 ~~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi 87 (166)
++.+++.|+.+|.-=++ +..+.+-.....+.-..=.+.|.+.|.|.++++..+-
T Consensus 83 ~~~l~~~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~~ 138 (290)
T 2rgy_A 83 LDELHRMHPKMVFLNRAFDALPDASFCPDHRRGGELAAATLIEHGHRKLAVISGPF 138 (290)
T ss_dssp HHHHHHHCSSEEEESSCCTTSGGGEECCCHHHHHHHHHHHHHHTTCCSEEEEESCT
T ss_pred HHHHhhcCCCEEEEccccCCCCCCEEEeCcHHHHHHHHHHHHHCCCceEEEEeCCC
Confidence 34445578887765443 2111111111233444445667888999999987653
No 148
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=49.57 E-value=55 Score=25.61 Aligned_cols=22 Identities=9% Similarity=0.099 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHCCCeEEEE
Q psy629 26 EAEHLTGLISAAKEQGIDFYYA 47 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~a 47 (166)
.++.+++.++.|++.|++.+..
T Consensus 103 ~~~~~~~~i~~A~~lGa~~v~~ 124 (296)
T 2g0w_A 103 QQKKEQTTFHMARLFGVKHINC 124 (296)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEE
Confidence 3667788888888888887754
No 149
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=49.37 E-value=73 Score=24.54 Aligned_cols=55 Identities=16% Similarity=0.219 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCCC-C--C-CCHHHHHHHHHHHHHHH----HcCCCeeEE
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLDI-T--Y-SSGKEVATLKRKLEQVA----QFGCRGFAL 82 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~~-~--~-s~~~d~~~L~~K~~ql~----~lGvr~Fai 82 (166)
.++.+++.++.|++.|+..+. ++||... . . +.++.++.+...|..+. +.||+ ++|
T Consensus 102 ~~~~~~~~i~~a~~lGa~~v~-~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~l 164 (287)
T 3kws_A 102 CMDTMKEIIAAAGELGSTGVI-IVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTS-VIF 164 (287)
T ss_dssp HHHHHHHHHHHHHHTTCSEEE-ECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCC-EEE
T ss_pred HHHHHHHHHHHHHHcCCCEEE-EecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCE-EEE
Confidence 457888888888888888764 4666431 1 1 34555666655555553 45774 443
No 150
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=49.21 E-value=81 Score=24.04 Aligned_cols=54 Identities=17% Similarity=0.099 Sum_probs=30.1
Q ss_pred HHHHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCC
Q psy629 33 LISAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDD 86 (166)
Q Consensus 33 L~~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDD 86 (166)
.++.+++.|+.+|.-=++ +..+.+-...+.+.-..=.+.|.+.|.+.++++...
T Consensus 79 ~~~~l~~~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~ 134 (287)
T 3bbl_A 79 RVQFLLKQKFPFVAFGRSNPDWDFAWVDIDGTAGTRQAVEYLIGRGHRRIAILAWP 134 (287)
T ss_dssp HHHHHHHTTCCEEEESCCSTTCCCCEEEECHHHHHHHHHHHHHHHTCCCEEEEECC
T ss_pred HHHHHHhcCCCEEEECCcCCCCCCCEEEeccHHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 344556678887765443 222211111223344444566777899999998654
No 151
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=48.64 E-value=99 Score=24.79 Aligned_cols=57 Identities=21% Similarity=0.164 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCC--CHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALSPGLDITYS--SGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s--~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
+..+.|+++++.+++.++++++ .-|--+... +.+.+..+.+-|..|.+.|+.-|.|.
T Consensus 24 ~~~~~~~~~~~~~~~~~~D~vl--~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~~v~ 82 (333)
T 1ii7_A 24 EFAEAFKNALEIAVQENVDFIL--IAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFAIE 82 (333)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEE--EESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCCEEE--ECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEEEeC
Confidence 4457889999999999999875 456544322 34567777777888888899888876
No 152
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=48.58 E-value=65 Score=28.73 Aligned_cols=60 Identities=18% Similarity=0.271 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCC---------------------------------CCCCCCHHHHHHHHHHHHHHH
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGL---------------------------------DITYSSGKEVATLKRKLEQVA 73 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~---------------------------------~~~~s~~~d~~~L~~K~~ql~ 73 (166)
.++|++||++|+++||+.+.=+-|.- ++++.+++-.+.|+.-+....
T Consensus 204 ~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~d~~~~y~~~~~~~g~~~~w~~~~ln~~~p~v~~~i~~~~~~W~ 283 (617)
T 1m7x_A 204 RDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWI 283 (617)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTSCCCSTTSSTTGGGSCSSBCC-----------CCCBCTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecCcccCccchhhhcCCCccccccCcccCCcCCCCCceecCCCHHHHHHHHHHHHHHH
Confidence 68999999999999999988775521 034445566677777777766
Q ss_pred H-cCCCeeEEecCCCC
Q psy629 74 Q-FGCRGFALLFDDIE 88 (166)
Q Consensus 74 ~-lGvr~FailfDDi~ 88 (166)
+ .||+-|= ||-+.
T Consensus 284 ~~~gvDGfR--~D~~~ 297 (617)
T 1m7x_A 284 ERFGIDALR--VDAVA 297 (617)
T ss_dssp HHSCCCEEE--ECCSH
T ss_pred HHhCcCEEE--Ecchh
Confidence 6 5999887 56544
No 153
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=48.56 E-value=68 Score=29.66 Aligned_cols=56 Identities=16% Similarity=0.217 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCC---------------------------------CCCCCCHHHHHHHHHHHHHHH
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGL---------------------------------DITYSSGKEVATLKRKLEQVA 73 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~---------------------------------~~~~s~~~d~~~L~~K~~ql~ 73 (166)
.++|++||++|+++||..+.=+-|+- ++++++++-.+.|+.-+....
T Consensus 312 ~~dfk~lV~~~H~~GI~VilD~V~NH~~~~~~~~~~fdg~~~y~~~d~~~~~~~~Wg~~~ln~~~p~Vr~~l~~~~~~Wl 391 (722)
T 3k1d_A 312 PDDFRALVDALHQAGIGVIVDWVPAHFPKDAWALGRFDGTPLYEHSDPKRGEQLDWGTYVFDFGRPEVRNFLVANALYWL 391 (722)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCCCCTTTTTTTTSSCCSBCCCCCSSSTTCCCCCCBCTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEEEeeccCCccchhhcCCCCcccccCCcccCccCCCCCeeecCCCHHHHHHHHHHHHHHH
Confidence 58999999999999999998875521 135566676777777777777
Q ss_pred H-cCCCeeEE
Q psy629 74 Q-FGCRGFAL 82 (166)
Q Consensus 74 ~-lGvr~Fai 82 (166)
+ .||+-|=+
T Consensus 392 ~~~gvDGfR~ 401 (722)
T 3k1d_A 392 QEFHIDGLRV 401 (722)
T ss_dssp HHSCCCEEEE
T ss_pred HHhCCCEEEE
Confidence 6 79999883
No 154
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=48.07 E-value=31 Score=29.18 Aligned_cols=29 Identities=10% Similarity=0.127 Sum_probs=27.0
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 22 YSVEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 22 Yp~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
|.++.++.|..+++.|++.||..+..++.
T Consensus 105 ~~e~~~~~lD~~l~~a~~~Gi~vil~l~~ 133 (440)
T 1uuq_A 105 YDETLLQGLDYLLVELAKRDMTVVLYFNN 133 (440)
T ss_dssp BCHHHHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 67889999999999999999999999984
No 155
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A*
Probab=48.04 E-value=13 Score=32.47 Aligned_cols=24 Identities=29% Similarity=0.461 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.+-++||+++||+.|++|+.-.||
T Consensus 124 rDlv~el~~A~rk~Glk~GlY~S~ 147 (450)
T 2wvv_A 124 RDILGELVKAYNDEGIDVHFYFSV 147 (450)
T ss_dssp SCHHHHHHHHHHHTTCEEEEEEES
T ss_pred CChHHHHHHHHHHcCCeEEEEecH
Confidence 578999999999999999999998
No 156
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}
Probab=47.83 E-value=39 Score=29.04 Aligned_cols=54 Identities=17% Similarity=0.230 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCC-------------------------C----------CCCCCHHHHHHHHHHHHHHH
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGL-------------------------D----------ITYSSGKEVATLKRKLEQVA 73 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~-------------------------~----------~~~s~~~d~~~L~~K~~ql~ 73 (166)
-|+.|++..++.|++|++=+.||. . ++++.++..+-+..-++.+.
T Consensus 95 Gl~~l~~~ih~~Glk~Giw~~p~i~~~~v~~~s~~~~~~~~~~di~~~~~~~~~~~~~~~lD~~~p~~~~~~~~~~~~l~ 174 (433)
T 3cc1_A 95 GFKPLSDAIHDLGLKFGIHIMRGIPRQAVYENSPVLGSTKTAREIAHTNSICPWNTDMYGVDPTKEGAQSYYNSLFELYA 174 (433)
T ss_dssp TTHHHHHHHHHTTCEEEEEEESSEEHHHHHHTCBCTTSSCBHHHHEETTCCBTTBTTEEEECTTSTTHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCeeEEEeCCCCchhccCCCCccccccceecccccCCcccCCCCCceeecCCCHHHHHHHHHHHHHHH
Confidence 599999999999999988899982 1 12344444555566677889
Q ss_pred HcCCCeeEE
Q psy629 74 QFGCRGFAL 82 (166)
Q Consensus 74 ~lGvr~Fai 82 (166)
+-||+.|=+
T Consensus 175 ~~GvDyvK~ 183 (433)
T 3cc1_A 175 QWGVDFVKV 183 (433)
T ss_dssp HTTCCEEEE
T ss_pred HcCCCEEEe
Confidence 999999874
No 157
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=47.47 E-value=37 Score=24.20 Aligned_cols=49 Identities=10% Similarity=0.087 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCC-eeEEecC
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCR-GFALLFD 85 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr-~FailfD 85 (166)
.|+..|.++.+.-++.||..+++||+. +.+..++.. .+.|+. .|-++.|
T Consensus 54 ~e~~~l~~~~~~~~~~~v~~vv~Is~d------~~~~~~~~~------~~~~~~~~~~~l~D 103 (162)
T 1tp9_A 54 KHVPGFIEKAGELKSKGVTEILCISVN------DPFVMKAWA------KSYPENKHVKFLAD 103 (162)
T ss_dssp THHHHHHHHHHHHHHTTCCCEEEEESS------CHHHHHHHH------HTCTTCSSEEEEEC
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECC------CHHHHHHHH------HhcCCCCCeEEEEC
Confidence 578888888888888999977899872 333333222 245665 5888887
No 158
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=47.28 E-value=25 Score=28.61 Aligned_cols=51 Identities=8% Similarity=0.197 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCe--eEEe
Q psy629 28 EHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRG--FALL 83 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~--Fail 83 (166)
+.+++|++.+++.+++.+..-|=+..- -+.+.|.++++++.++|++. +++-
T Consensus 146 ~~~~~l~~~a~~~~~kvI~S~Hdf~~t-----P~~~el~~~~~~~~~~GaDIvKia~~ 198 (276)
T 3o1n_A 146 DEVKATVGYAHQHNVAVIMSNHDFHKT-----PAAEEIVQRLRKMQELGADIPKIAVM 198 (276)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEESSCC-----CCHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred HHHHHHHHHHHhCCCEEEEEeecCCCC-----cCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 367888899999999999988832211 12467899999999999765 5543
No 159
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=47.26 E-value=44 Score=25.60 Aligned_cols=54 Identities=7% Similarity=0.015 Sum_probs=28.4
Q ss_pred HHHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 34 ISAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 34 ~~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
++.+++.|+.+|.-=++ +. +.+-.....+....=.+.|.+.|.|.++++..+-+
T Consensus 81 ~~~l~~~~iPvV~~~~~~~~~-~~~V~~D~~~~g~~a~~~L~~~G~~~i~~i~~~~~ 136 (290)
T 3clk_A 81 LQLLQSSDVPYCFLSMGFDDD-RPFISSDDEDIGYQATNLLINEGHRQIGIAGIDQY 136 (290)
T ss_dssp HHHHHCC--CEEEESCC--CC-SCEEECCHHHHHHHHHHHHHTTTCCSEEEESCCCC
T ss_pred HHHHHhCCCCEEEEcCCCCCC-CCEEEeChHHHHHHHHHHHHHcCCCEEEEEeCCCC
Confidence 34455678877664332 21 21111122344444456678889999999876543
No 160
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=47.04 E-value=55 Score=28.42 Aligned_cols=30 Identities=7% Similarity=-0.012 Sum_probs=27.3
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.+.++.++.++++++.|+++||..++.||-
T Consensus 79 ~~~~~~l~~~d~vv~~a~~~Gi~vildlH~ 108 (515)
T 3icg_A 79 TIDQTWMKRVEEIANYAFDNDMYVIINLHH 108 (515)
T ss_dssp CBCHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEEecCC
Confidence 356788999999999999999999999996
No 161
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*
Probab=46.94 E-value=13 Score=34.17 Aligned_cols=62 Identities=11% Similarity=0.192 Sum_probs=47.9
Q ss_pred cCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCC-------------------------------------CCCCCHHHH
Q psy629 20 DLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLD-------------------------------------ITYSSGKEV 62 (166)
Q Consensus 20 e~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~-------------------------------------~~~s~~~d~ 62 (166)
+.|| ..++|++.-++.|++++.-|.|+.. .+|.+++..
T Consensus 215 ~~FP-----dp~~mv~~Lh~~G~k~v~~idP~i~~~~~~~~y~e~~~~g~fvk~~~G~~~~g~~WpG~~~~pDftnp~a~ 289 (666)
T 3nsx_A 215 KNFP-----DFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVKNNYFCKREDGSDFVAAVWPGDTHFPDMLNPEAR 289 (666)
T ss_dssp TTCT-----THHHHHHHHHTTTCEEEEEEESCEECCTTCHHHHHHHHTTCBCBCTTSCBCCEEETTEEEECBCTTSHHHH
T ss_pred hhCC-----CHHHHHHHHHHcCceEEeeeccceeeecCchHHhhhcccCccccCCCCCcceEEecCCccCCccccCHHHH
Confidence 4677 4889999999999999999999742 255566666
Q ss_pred HHHHHHHHHHHHcCCCeeEEecCC
Q psy629 63 ATLKRKLEQVAQFGCRGFALLFDD 86 (166)
Q Consensus 63 ~~L~~K~~ql~~lGvr~FailfDD 86 (166)
+=...+++.+.+.||+.|-+=+..
T Consensus 290 ~ww~~~~~~~~~~Gidg~W~DmnE 313 (666)
T 3nsx_A 290 KWFGDKYRFLIDQGIEGFWNDMNE 313 (666)
T ss_dssp HHHHHTTHHHHTTTCCEEEEESTT
T ss_pred HHhhhhhhHHHhccchhhhhccCC
Confidence 677788888999999987654433
No 162
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=46.63 E-value=55 Score=28.90 Aligned_cols=60 Identities=17% Similarity=0.192 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCC----------------C----------------------------------CCCC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPG----------------L----------------------------------DITY 56 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG----------------~----------------------------------~~~~ 56 (166)
.++|++||++|+++||+.+.=+-|. . ++++
T Consensus 218 ~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~ 297 (583)
T 1ea9_C 218 KDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDVLKNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNT 297 (583)
T ss_dssp HHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHHHHTTTTTCTTTTSSCBCSSSCCCTTSCCSBCBSSSCTTSBBCCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccccCCCccHHHHHHHhcCCCCCccCceEecCCCCCCCCCCCCceecCCCCCcceecc
Confidence 5899999999999999998744221 0 3455
Q ss_pred CCHHHHHHHHHHHHHHH-HcCCCeeEEecCCCC
Q psy629 57 SSGKEVATLKRKLEQVA-QFGCRGFALLFDDIE 88 (166)
Q Consensus 57 s~~~d~~~L~~K~~ql~-~lGvr~FailfDDi~ 88 (166)
.+++-.+.|+.=+.... +.||+-|= ||-+.
T Consensus 298 ~~p~Vr~~l~~~~~~W~~~~gvDGfR--~D~~~ 328 (583)
T 1ea9_C 298 EHPDVKEYLLKAAEYWIRETGIDGWR--LDVAN 328 (583)
T ss_dssp TSHHHHHHHHHHHHHHHHHHCCSEEE--ETTCT
T ss_pred CCHHHHHHHHHHHHHHHHhcCceEEE--ecccc
Confidence 56666777777777666 89999888 56444
No 163
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=45.93 E-value=96 Score=23.55 Aligned_cols=51 Identities=16% Similarity=0.134 Sum_probs=28.1
Q ss_pred HHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCC
Q psy629 36 AAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDI 87 (166)
Q Consensus 36 ~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi 87 (166)
..+ .|+.+|.-=++ +..+.+-..+..+.-..=.+.|.+.|.+.++++..+-
T Consensus 82 ~l~-~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~~ 134 (285)
T 3c3k_A 82 NII-GAFPWVQCAEYDPLSTVSSVSIDDVAASEYVVDQLVKSGKKRIALINHDL 134 (285)
T ss_dssp HHH-TTSSEEEESSCCTTSSSCEEECCHHHHHHHHHHHHHHTTCCCEEEEECCT
T ss_pred HHh-cCCCEEEEccccCCCCCCEEEEChHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 344 78887765443 2222111111233334445667888999999987653
No 164
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*
Probab=45.88 E-value=13 Score=33.45 Aligned_cols=55 Identities=9% Similarity=0.076 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCCCCCC--------CCHH--HHHHHHHHHHHHHHcCCCeeEEe
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGLDITY--------SSGK--EVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~~~~~--------s~~~--d~~~L~~K~~ql~~lGvr~Fail 83 (166)
-|++|++..++.|++|+.=+.||...|. ..+. ...-+..-++++.+-||+.+=+=
T Consensus 78 gl~~l~~~i~~~Glk~gi~~~~~~~~~~~~~p~~~~~~pg~g~~~~~~~~~~~~~~wGvd~lK~D 142 (614)
T 3a21_A 78 GMSAITAYIHSKGLKAGIYTDAGKDGCGYYYPTGRPAAPGSGSEGHYDQDMLQFSTWGFDFVKVD 142 (614)
T ss_dssp CHHHHHHHHHHTTCEEEEEEESSSSCHHHHSCSSSCCCTTCSCTTCHHHHHHHHHHHTCSEEEEE
T ss_pred cHHHHHHHHHHCCCeeEEEecCCCccccccCCCCCCCCCchhhHHHHHHHHHHHHHcCCcEEEec
Confidence 5999999999999999999999874332 1000 01112223556789999987743
No 165
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=45.85 E-value=43 Score=24.99 Aligned_cols=48 Identities=13% Similarity=0.033 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCC-eeEEecC
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCR-GFALLFD 85 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr-~FailfD 85 (166)
|+..|.++.+.-++.||..+++||+. +.+..++..+ +.|+. .|-++.|
T Consensus 76 e~p~l~~~~~~~~~~gv~~vv~Is~d------~~~~~~~f~~------~~~~~~~fp~l~D 124 (184)
T 3uma_A 76 HLPGYLENRDAILARGVDDIAVVAVN------DLHVMGAWAT------HSGGMGKIHFLSD 124 (184)
T ss_dssp HHHHHHHTHHHHHTTTCCEEEEEESS------CHHHHHHHHH------HHTCTTTSEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEECC------CHHHHHHHHH------HhCCCCceEEEEc
Confidence 67788888888888999978899982 2333333322 34555 5888877
No 166
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=45.11 E-value=89 Score=27.51 Aligned_cols=24 Identities=29% Similarity=0.333 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.++|++||++|+++||+.+.=+-|
T Consensus 222 ~~df~~lv~~~H~~Gi~VilD~V~ 245 (588)
T 1j0h_A 222 KETLKTLIDRCHEKGIRVMLDAVF 245 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECc
Confidence 589999999999999999876643
No 167
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=44.91 E-value=75 Score=26.56 Aligned_cols=51 Identities=20% Similarity=0.264 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCH------HHHHHHHHHHHHHHHcCCC
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLDITYSSG------KEVATLKRKLEQVAQFGCR 78 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~------~d~~~L~~K~~ql~~lGvr 78 (166)
-.+.|+++.+.|+++|++ .+.|||.-...+|+ ..+..|.--.+-+..+|..
T Consensus 100 ~~~~l~~iG~~a~~~~iR--LS~HPgqF~vL~S~~~~Vv~~SI~dL~yHa~~ld~mG~~ 156 (310)
T 3tc3_A 100 LSHILGDIGDFIKENSIR--ISMHPGQYVVLNSVREEVVRSSIMELKYHADLLDSMGIE 156 (310)
T ss_dssp THHHHHHHHHHHHHTTCE--EEECCCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCcE--EEecCCCCccCCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 345799999999999997 57899998888763 3456666666666777874
No 168
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=44.84 E-value=43 Score=27.65 Aligned_cols=32 Identities=16% Similarity=0.316 Sum_probs=26.6
Q ss_pred hccCCCHH-HHHHHHHHHHHHHHCCCeEEEEec
Q psy629 18 WRDLYSVE-EAEHLTGLISAAKEQGIDFYYALS 49 (166)
Q Consensus 18 Wre~Yp~~-~l~~l~~L~~~a~~~~v~Fv~ais 49 (166)
|-+||+.- .++.+..+++.|++.|++..+.+|
T Consensus 49 w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~H 81 (332)
T 1hjs_A 49 WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFH 81 (332)
T ss_dssp CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 66666442 478899999999999999999997
No 169
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=44.46 E-value=13 Score=31.93 Aligned_cols=40 Identities=15% Similarity=0.233 Sum_probs=30.1
Q ss_pred EEEEecCC--CCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 44 FYYALSPG--LDITYSSGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 44 Fv~aisPG--~~~~~s~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
.+|-|+|+ .+-+-+..-|++-|++||+-|.+|||+..-|+
T Consensus 11 viYei~~~~F~d~~~dg~Gdl~Gi~~kLdYLk~LGvt~I~L~ 52 (549)
T 4aie_A 11 VVYQVYPKSFQDSNGDGIGDLQGIISRLDYLEKLGIDAIWLS 52 (549)
T ss_dssp CEEEECGGGTCCSSSSSSCCHHHHHTTHHHHHHHTCSEEEEC
T ss_pred eEEEEEcchhcCCCCCCCcCHHHHHHhhHHHHHCCCCEEEeC
Confidence 58899994 22211112579999999999999999998876
No 170
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=44.28 E-value=68 Score=28.26 Aligned_cols=56 Identities=14% Similarity=0.118 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecC----------------------------------------------C----CCCCC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSP----------------------------------------------G----LDITY 56 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisP----------------------------------------------G----~~~~~ 56 (166)
.++|++||++|+++||+.+.=+-| | .++++
T Consensus 219 ~~dfk~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~y~~~~~~~~~~pdln~ 298 (585)
T 1wzl_A 219 LPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDVLQKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRT 298 (585)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCCTTSHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSCCSBCBSSSSCTTCBBBCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcCCcCCCccHHHHHHHhcCCCCCccCceEecCCCCCCCCCCCeeEcccCCCCCCeeCc
Confidence 589999999999999999875422 0 03455
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCeeEE
Q psy629 57 SSGKEVATLKRKLEQVAQFGCRGFAL 82 (166)
Q Consensus 57 s~~~d~~~L~~K~~ql~~lGvr~Fai 82 (166)
++++-.+.|+.=+....+.||+-|=+
T Consensus 299 ~~~~vr~~l~~~~~~Wl~~gvDGfR~ 324 (585)
T 1wzl_A 299 ENPEVKEYLFDVARFWMEQGIDGWRL 324 (585)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 56666777777777666999999884
No 171
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=43.87 E-value=27 Score=30.00 Aligned_cols=30 Identities=10% Similarity=0.225 Sum_probs=27.5
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.|.++.++.|+++++.|+++|+..+..+|.
T Consensus 98 ~~~~~~l~~l~~~v~~a~~~Gi~vildlH~ 127 (481)
T 2osx_A 98 VYDQQYLDRVEDRVGWYAERGYKVMLDMHQ 127 (481)
T ss_dssp BCCHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcCHHHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 467889999999999999999999999984
No 172
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=43.58 E-value=38 Score=26.72 Aligned_cols=51 Identities=6% Similarity=0.087 Sum_probs=34.7
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHH
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVA 73 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~ 73 (166)
+|+++.++.++++++.|+++|+..+.-+|.... +......+...+=+++|.
T Consensus 57 ~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~~~--~~~~~~~~~~~~~w~~ia 107 (294)
T 2whl_A 57 QWEKDDIDTIREVIELAEQNKMVAVVEVHDATG--RDSRSDLNRAVDYWIEMK 107 (294)
T ss_dssp SSCCCCHHHHHHHHHHHHTTTCEEEEEECTTTT--CCCHHHHHHHHHHHHHTH
T ss_pred ccCccHHHHHHHHHHHHHHCCCEEEEEeccCCC--CCcchhHHHHHHHHHHHH
Confidence 355567899999999999999999999997321 122233444444444443
No 173
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=43.17 E-value=84 Score=29.11 Aligned_cols=59 Identities=22% Similarity=0.311 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCC-------------------------------------CCCCCCHHHHHHHHHHH
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGL-------------------------------------DITYSSGKEVATLKRKL 69 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~-------------------------------------~~~~s~~~d~~~L~~K~ 69 (166)
.++|++||++|+++||..+.=+-|.- +++|++.+-.+.|+.-+
T Consensus 250 ~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~g~~~fd~~~~~~~~yf~~~~~g~~~~w~~~~lN~~~p~V~~~l~~~l 329 (755)
T 3aml_A 250 PEDLKYLVDKAHSLGLRVLMDVVHSHASNNVTDGLNGYDVGQNTHESYFHTGDRGYHKLWDSRLFNYANWEVLRFLLSNL 329 (755)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSCBCCCTTTSGGGGCSSCCGGGSSBCCGGGGEETTTTEECBCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccccccccchhccccCCCCCcceeecCCCCccCCCCCceeccCCHHHHHHHHHHH
Confidence 68999999999999999987765421 24566667778888888
Q ss_pred HHHHH-cCCCeeEEecCCC
Q psy629 70 EQVAQ-FGCRGFALLFDDI 87 (166)
Q Consensus 70 ~ql~~-lGvr~FailfDDi 87 (166)
....+ .||+-|= ||-+
T Consensus 330 ~~Wl~e~gvDGfR--~Dav 346 (755)
T 3aml_A 330 RYWMDEFMFDGFR--FDGV 346 (755)
T ss_dssp HHHHHHHCCCEEE--ETTH
T ss_pred HHHHHHcCCCEEE--ecch
Confidence 88777 8999987 5544
No 174
>2le3_A Carnitine O-palmitoyltransferase 1, liver isoform; membrane protein, amphiphilic structure, membrane-protein interaction, structural switch; NMR {Homo sapiens}
Probab=43.14 E-value=1.6 Score=26.37 Aligned_cols=18 Identities=28% Similarity=0.789 Sum_probs=15.4
Q ss_pred CeEEEEecC-CCCCCCCCH
Q psy629 42 IDFYYALSP-GLDITYSSG 59 (166)
Q Consensus 42 v~Fv~aisP-G~~~~~s~~ 59 (166)
|.|-++|.| |.+++|+.+
T Consensus 8 Vaf~ftvt~eG~~~~~~~e 26 (42)
T 2le3_A 8 VAFQFTVTPDGIDLRLSHE 26 (42)
T ss_dssp CSEEEEEETTEEEEEECHH
T ss_pred heeeeeecCCCccccccHH
Confidence 679999999 889999863
No 175
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=42.84 E-value=81 Score=21.82 Aligned_cols=48 Identities=23% Similarity=0.281 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
..++..|+++.+.-++.|+. +++||.. +.+..++..++ .|+. |-++.|
T Consensus 52 ~~~~~~l~~~~~~~~~~~~~-vv~vs~d------~~~~~~~~~~~------~~~~-~~~~~d 99 (163)
T 3gkn_A 52 TTEGLDFNALLPEFDKAGAK-ILGVSRD------SVKSHDNFCAK------QGFA-FPLVSD 99 (163)
T ss_dssp HHHHHHHHHHHHHHHHTTCE-EEEEESS------CHHHHHHHHHH------HCCS-SCEEEC
T ss_pred HHHHHHHHHHHHHHHHCCCE-EEEEeCC------CHHHHHHHHHH------hCCC-ceEEEC
Confidence 45788888888888888998 5678872 44555555544 3554 666655
No 176
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=42.79 E-value=18 Score=30.75 Aligned_cols=22 Identities=14% Similarity=0.443 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHCCCeEEEEe
Q psy629 27 AEHLTGLISAAKEQGIDFYYAL 48 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~ai 48 (166)
.++|++|+++|+++||+.+.=+
T Consensus 64 ~~dfk~Lv~~aH~~Gi~VilD~ 85 (448)
T 1g94_A 64 RAQFIDMVNRCSAAGVDIYVDT 85 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEE
Confidence 6899999999999999987644
No 177
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=42.75 E-value=1e+02 Score=25.17 Aligned_cols=57 Identities=11% Similarity=0.043 Sum_probs=34.5
Q ss_pred HHHHHHHHCCCeEEEEecCC------CCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 32 GLISAAKEQGIDFYYALSPG------LDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 32 ~L~~~a~~~~v~Fv~aisPG------~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
++++..++.|+.+|.-=++- ..+.+-..+..+.-..=.+.|.+.|.|.++++...-.
T Consensus 88 ~~~~~l~~~~iPvV~i~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~r~I~~i~~~~~ 150 (412)
T 4fe7_A 88 QIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPES 150 (412)
T ss_dssp HHHHHHTTCCSCEEEEEECCSSGGGSCSSEEEEECHHHHHHHHHHHHHHTTCCEEEEECCCTT
T ss_pred HHHHHHhhCCCCEEEecCCccccccCCCCCEEEeCHHHHHHHHHHHHHHcCCceEEEeccccc
Confidence 35666778899988654431 1111111122344455556788899999999876544
No 178
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=42.56 E-value=28 Score=28.92 Aligned_cols=59 Identities=10% Similarity=0.032 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCCCCCCCCHH-HHHHHHHHHHHHHHcCCCeeEEecCCCCC
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGLDITYSSGK-EVATLKRKLEQVAQFGCRGFALLFDDIES 89 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~-d~~~L~~K~~ql~~lGvr~FailfDDi~~ 89 (166)
-|+.|++.+++.|++|++=..||..-|-.... .......=++++.+-||+-+= .|.+..
T Consensus 84 G~k~ladyih~~Glk~Giy~~~~~~~c~g~~~~~~~~~~~da~~~a~wGvdylK--~D~~~~ 143 (400)
T 4do4_A 84 GIPFLADYVHSLGLKLGIYADMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLK--LDGCFS 143 (400)
T ss_dssp CHHHHHHHHHHTTCEEEEEEEBSSBCTTSCBCBCGGGHHHHHHHHHHTTCCEEE--EECTTC
T ss_pred ccHHHHHHHHHCCceEEEecCCCCcccCCCCchhHhHHHHHHHHHHHhCCceEe--eccCcC
Confidence 59999999999999999999998764432110 011111224567889999877 555554
No 179
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=42.53 E-value=22 Score=28.12 Aligned_cols=48 Identities=6% Similarity=0.024 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHH
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVA 73 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~ 73 (166)
++.++.|+++++.|.++|+..+..+|-...- +..+...++.+.+.+-+
T Consensus 75 ~~~~~~ld~~v~~a~~~Gi~vild~h~~~~~--~~~~~~~~~~~~~a~r~ 122 (293)
T 1tvn_A 75 EGNMSRLDTVVNAAIAEDMYVIIDFHSHEAH--TDQATAVRFFEDVATKY 122 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEECSCGG--GCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEcCCCCcc--ccHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999852211 12344445544444333
No 180
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=42.42 E-value=95 Score=24.51 Aligned_cols=52 Identities=12% Similarity=0.117 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHH----HcCCC
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVA----QFGCR 78 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~----~lGvr 78 (166)
++.++.+++.++.|++.|++.+.. |+..-. .++++.+.+.+.|..+. +.||+
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~--~~~~~~-~~~~~~~~~~~~l~~l~~~a~~~Gv~ 159 (303)
T 3l23_A 104 PKIMEYWKATAADHAKLGCKYLIQ--PMMPTI-TTHDEAKLVCDIFNQASDVIKAEGIA 159 (303)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEE--CSCCCC-CSHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEE--CCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 456889999999999999999875 333222 34566666666665544 46997
No 181
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=42.18 E-value=56 Score=31.35 Aligned_cols=64 Identities=13% Similarity=0.240 Sum_probs=44.1
Q ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEecCC--------------C-----------------CCCCCCHHHHHHHHHHHHH
Q psy629 23 SVEEAEHLTGLISAAKEQGIDFYYALSPG--------------L-----------------DITYSSGKEVATLKRKLEQ 71 (166)
Q Consensus 23 p~~~l~~l~~L~~~a~~~~v~Fv~aisPG--------------~-----------------~~~~s~~~d~~~L~~K~~q 71 (166)
|....++|++||++|+++||+.+.=+-+. . +++.++.+-.+.|+.=+..
T Consensus 557 ~~~~~~efk~lV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~vr~~i~d~l~~ 636 (1014)
T 2ya1_A 557 PEKRIAEFKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKY 636 (1014)
T ss_dssp TTHHHHHHHHHHHHHHTTTCEEEEEECTTCCSCHHHHHTTSTTTSBCBCTTCCBCEETTEECBCTTSHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHcCCEEEEEEeccccccccccccCCCCeeEEeCCCCCcccCCCCCCcCcCCHHHHHHHHHHHHH
Confidence 33468999999999999999998876551 0 1222234455666666666
Q ss_pred HHH-cCCCeeEEecCCCC
Q psy629 72 VAQ-FGCRGFALLFDDIE 88 (166)
Q Consensus 72 l~~-lGvr~FailfDDi~ 88 (166)
..+ .||+-|= ||=+.
T Consensus 637 W~~e~gvDGfR--~D~~~ 652 (1014)
T 2ya1_A 637 LVDTYKVDGFR--FDMMG 652 (1014)
T ss_dssp HHHHHCCCEEE--ETTGG
T ss_pred HHHhcCceEEE--EeCCC
Confidence 555 8999887 66554
No 182
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=42.16 E-value=51 Score=27.03 Aligned_cols=54 Identities=13% Similarity=0.110 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHCCCeEEEEec-CC-----CCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALS-PG-----LDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDD 86 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~ais-PG-----~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDD 86 (166)
.+.|+++++.|++.||++.+--+ |. ..-..++.+++..|++. +|-..+++.||=
T Consensus 197 ~~~l~~l~~~A~~~Gv~l~lE~~~~~~~~~g~~~~~~t~~~~~~l~~~------v~~~~vgl~~D~ 256 (367)
T 1tz9_A 197 RYFLERVIPVCEEENIKMGIHPDDPPWEIFGLPRITKNLADLKRILSL------VDSPANGITFCT 256 (367)
T ss_dssp HHHHHHHHHHHHHHTCEEEECCCSSSSCBTTBCCCTTSHHHHHHHHHH------TCSTTEECCEET
T ss_pred HHHHHHHHHHHHHhCCEEEEEECCCcccccCCCcccCCHHHHHHHHHh------cCCCCEEEEEec
Confidence 46899999999999997766443 21 11223455555555543 466678888863
No 183
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=41.77 E-value=1.3e+02 Score=24.99 Aligned_cols=104 Identities=7% Similarity=0.098 Sum_probs=54.7
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHc--CC-CeeEEecCCCCCCCCHHHHH
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQF--GC-RGFALLFDDIESEMSEADKE 97 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~l--Gv-r~FailfDDi~~~~~~~d~~ 97 (166)
.|.++.++.|+++++.|.++|+..+.-+|-... .......+...+-+++|.+. +- ... .|+=...+...-+..
T Consensus 80 ~~~~~~l~~ld~~v~~a~~~GiyVIlDlH~~~g--~~~~~~~~~~~~~w~~iA~ryk~~~~~V--i~el~NEP~~~~~~~ 155 (345)
T 3jug_A 80 QWEKDDIDTVREVIELAEQNKMVAVVEVHDATG--RDSRSDLDRAVDYWIEMKDALIGKEDTV--IINIANEWYGSWDGA 155 (345)
T ss_dssp SSCCCCHHHHHHHHHHHHTTTCEEEEEECTTTT--CCCHHHHHHHHHHHHHTHHHHTTCTTTE--EEECCTTCCCSSCHH
T ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCC--CCcHHHHHHHHHHHHHHHHHHcCCCCeE--EEEecCCCCCCCCHH
Confidence 345567999999999999999999999996221 11223344444444444441 22 222 255333332211112
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCceEccc-ccccc
Q psy629 98 VFQSFAHAQVSVTNEVFEHLGQPKFMLCPT-QYCST 132 (166)
Q Consensus 98 ~f~~~a~aq~~l~n~v~~~l~~~~l~~cPt-~Y~~~ 132 (166)
.+. ....++++.|.+. +...+++|+. .|.++
T Consensus 156 ~w~---~~~~~~i~~IR~~-dp~~~Iiv~g~~w~~~ 187 (345)
T 3jug_A 156 AWA---DGYIDVIPKLRDA-GLTHTLMVDAAGWGQY 187 (345)
T ss_dssp HHH---HHHHHHHHHHHHT-TCCSCEEEECBTTTTB
T ss_pred HHH---HHHHHHHHHHHhh-CCCCEEEEeCCCcccc
Confidence 222 2223556665544 3344666655 44443
No 184
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=41.51 E-value=42 Score=26.89 Aligned_cols=47 Identities=9% Similarity=0.095 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCe
Q psy629 28 EHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRG 79 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~ 79 (166)
+.+++|++.+++.|++.+.+-|=+..- . +.+.|.+++.++.++|.+.
T Consensus 126 ~~~~~l~~~a~~~~~kiI~S~Hdf~~T-P----~~~el~~~~~~~~~~gaDI 172 (258)
T 4h3d_A 126 EVIDEVVNFAHKKEVKVIISNHDFNKT-P----KKEEIVSRLCRMQELGADL 172 (258)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEESSCC-C----CHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHhCCCEEEEEEecCCCC-C----CHHHHHHHHHHHHHhCCCE
Confidence 346788889999999999999853321 1 1356888999999999664
No 185
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=41.46 E-value=31 Score=26.40 Aligned_cols=48 Identities=13% Similarity=0.221 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
.++++.+..+++|+..+ +++|+.. +.++.+.+-++....+|++...+.
T Consensus 62 ~~~~~~~~l~~~gl~i~-~~~~~~~------~~~~~~~~~i~~A~~lGa~~v~~~ 109 (257)
T 3lmz_A 62 QIRAFHDKCAAHKVTGY-AVGPIYM------KSEEEIDRAFDYAKRVGVKLIVGV 109 (257)
T ss_dssp HHHHHHHHHHHTTCEEE-EEEEEEE------CSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHcCCeEE-EEecccc------CCHHHHHHHHHHHHHhCCCEEEec
Confidence 45566667778899865 6666432 346777888888899999988763
No 186
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=41.30 E-value=63 Score=23.34 Aligned_cols=47 Identities=21% Similarity=0.210 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
.++..|+++.+.-++.|+. +++||+ ++.++.++..++ .|++ |-++.|
T Consensus 69 ~el~~l~~l~~~~~~~~~~-vv~Vs~------D~~~~~~~~~~~------~~~~-f~~l~D 115 (179)
T 3ixr_A 69 TEGLEFNLLLPQFEQINAT-VLGVSR------DSVKSHDSFCAK------QGFT-FPLVSD 115 (179)
T ss_dssp HHHHHHHHHHHHHHTTTEE-EEEEES------CCHHHHHHHHHH------HTCC-SCEEEC
T ss_pred HHHHHHHHHHHHHHHCCCE-EEEEcC------CCHHHHHHHHHH------cCCc-eEEEEC
Confidence 5788899999888888988 678886 234544444443 3554 666665
No 187
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=41.05 E-value=45 Score=26.18 Aligned_cols=49 Identities=18% Similarity=0.248 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHc
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQF 75 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~l 75 (166)
.++.+++.++.|++.|++.+ .+|||....-+.++.++.+.+-|..+.+.
T Consensus 92 ~~~~~~~~i~~A~~lGa~~v-v~h~g~~~~~~~~~~~~~~~~~l~~l~~~ 140 (303)
T 3aal_A 92 GVDFLRAEIERTEAIGAKQL-VLHPGAHVGAGVEAGLRQIIRGLNEVLTR 140 (303)
T ss_dssp HHHHHHHHHHHHHHHTCSEE-EECCEECTTSCHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHHcCCCEE-EECCCcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 46789999999999999987 47888543223456777777777777654
No 188
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=40.96 E-value=55 Score=25.62 Aligned_cols=27 Identities=7% Similarity=0.076 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
+..++.|.++++.|.++|+..+..+|-
T Consensus 73 ~~~~~~ld~~v~~a~~~Gi~vild~h~ 99 (291)
T 1egz_A 73 AGNKAKVERVVDAAIANDMYAIIGWHS 99 (291)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 457999999999999999999999986
No 189
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=40.96 E-value=77 Score=24.43 Aligned_cols=55 Identities=13% Similarity=0.023 Sum_probs=32.3
Q ss_pred HHHHHHHCCCeEEEEecCCC-CCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 33 LISAAKEQGIDFYYALSPGL-DITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 33 L~~~a~~~~v~Fv~aisPG~-~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
.++...+ |+.+|.-=++-. .+.+-.....+.-..=.+.|.+.|.|.++++-..-.
T Consensus 87 ~~~~l~~-~iPvV~i~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~~~ 142 (303)
T 3kke_A 87 MLAAVLE-GVPAVTINSRVPGRVGSVILDDQKGGGIATEHLITLGHSRIAFISGTAI 142 (303)
T ss_dssp HHHHHHT-TSCEEEESCCCTTCCCEEEECHHHHHHHHHHHHHHTTCCSEEEEESCSS
T ss_pred HHHHHhC-CCCEEEECCcCCCCCCEEEECcHHHHHHHHHHHHHCCCCeEEEEeCCCc
Confidence 3444455 888876544422 222211223445555566788899999999876543
No 190
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=40.73 E-value=46 Score=26.76 Aligned_cols=53 Identities=11% Similarity=-0.044 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
..+++.+.++.+++.|+.+..++-+|+.- .+.+++..+. +.+.++|++.+.+.
T Consensus 176 ~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~--et~e~~~~~~---~~l~~l~~~~i~i~ 228 (348)
T 3iix_A 176 SFENRLNCLLTLKELGYETGAGSMVGLPG--QTIDDLVDDL---LFLKEHDFDMVGIG 228 (348)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECBEESCTT--CCHHHHHHHH---HHHHHHTCSEECCE
T ss_pred CHHHHHHHHHHHHHhCCeeccceEEeCCC--CCHHHHHHHH---HHHHhcCCCEEeee
Confidence 45666777788899999999888888832 2345555544 45566788875543
No 191
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=40.62 E-value=34 Score=27.00 Aligned_cols=51 Identities=10% Similarity=0.077 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCe--eEEe
Q psy629 28 EHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRG--FALL 83 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~--Fail 83 (166)
+.++++++.+++.|++.+..-|=+..- -..+.|.++++++.++|++. +++-
T Consensus 112 ~~~~~l~~~~~~~~~kvI~S~Hdf~~t-----p~~~el~~~~~~~~~~gaDivKia~~ 164 (238)
T 1sfl_A 112 EKHQRIITHLQQYNKEVIISHHNFEST-----PPLDELQFIFFKMQKFNPEYVKLAVM 164 (238)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEESSCC-----CCHHHHHHHHHHHHTTCCSEEEEEEC
T ss_pred HHHHHHHHHHHhcCCEEEEEecCCCCC-----cCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 346788899999999999999843221 11477889999999999775 5544
No 192
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=40.56 E-value=73 Score=24.39 Aligned_cols=54 Identities=9% Similarity=0.057 Sum_probs=30.5
Q ss_pred HHHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCC
Q psy629 34 ISAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDI 87 (166)
Q Consensus 34 ~~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi 87 (166)
++.+.+.|+.+|.-=++ +..+.+-...+.+.-..=.+.|.+.|.+.++++..+-
T Consensus 88 ~~~l~~~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~~ 143 (289)
T 2fep_A 88 VAEFKRSPVPIVLAASVEEQEETPSVAIDYEQAIYDAVKLLVDKGHTDIAFVSGPM 143 (289)
T ss_dssp HHHHHHSSSCEEEESCCCTTCCSCEEECCHHHHHHHHHHHHHHTTCSSEEEEESCT
T ss_pred HHHHHhcCCCEEEEccccCCCCCCEEEECcHHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 34445678887765443 2222111112234444445677889999999987653
No 193
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=40.55 E-value=48 Score=28.26 Aligned_cols=51 Identities=16% Similarity=0.308 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHCCCeEEEEecC--------CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCC
Q psy629 28 EHLTGLISAAKEQGIDFYYALSP--------GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDD 86 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~aisP--------G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDD 86 (166)
+.|++++..|.+.||+. +||| |+.--.++.+++..|++. .+-..++|.||=
T Consensus 200 ~~L~~i~~~Aee~GV~L--aiep~dpp~~~~Gl~riv~t~e~~~rll~~------vdsp~~gl~lDt 258 (386)
T 3bdk_A 200 YFIKAILPTAEEAGVKM--AIHPDDPPYGIFGLPRIITGQEAVERFLNL------YDSEHNGITMCV 258 (386)
T ss_dssp HHHHHHHHHHHSSSCEE--EECCCSSSSCCTTCCCCCCSHHHHHHHHHT------TCSTTEEEEEEH
T ss_pred HHHHHHHHHHHHhCCEE--EEeeCCcccccccCCceeCCHHHHHHHHHh------cCCCCEEEEEcc
Confidence 56899999999999875 5676 454344566776666543 344567888774
No 194
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=40.30 E-value=75 Score=25.40 Aligned_cols=50 Identities=18% Similarity=0.213 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCC-CCC----CCHHHHHHHHHHHHHHHHcC
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLD-ITY----SSGKEVATLKRKLEQVAQFG 76 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~-~~~----s~~~d~~~L~~K~~ql~~lG 76 (166)
.++.+++.++.|++.|++.+ .++||.+ ..+ +..+.++.+.+-|+.+.+..
T Consensus 105 ~i~~~~~~i~~A~~LGa~~v-v~~~g~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a 159 (333)
T 3ktc_A 105 AFELMHESAGIVRELGANYV-KVWPGQDGWDYPFQVSHKNLWKLAVDGMRDLAGAN 159 (333)
T ss_dssp HHHHHHHHHHHHHHHTCSEE-EECCTTCEESSTTSSCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhCCCEE-EECCCCCCcCCCCcCCHHHHHHHHHHHHHHHHHHh
Confidence 36789999999999999988 5788842 222 23567888888899888864
No 195
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=39.96 E-value=30 Score=26.56 Aligned_cols=52 Identities=12% Similarity=0.084 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCC
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDD 86 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDD 86 (166)
.|++|++.|++.||.+.+=-+++. + .++.+++..| ++.+.+.|-. +++.||=
T Consensus 113 ~l~~l~~~a~~~Gv~l~lEn~~~~-~-~~~~~~~~~l---l~~v~~~~~~-vg~~~D~ 164 (264)
T 1yx1_A 113 DLAALGRRLARHGLQLLVENDQTP-Q-GGRIEVLERF---FRLAERQQLD-LAMTFDI 164 (264)
T ss_dssp CHHHHHHHHTTSSCEEEEECCSSH-H-HHCHHHHHHH---HHHHHHTTCS-EEEEEET
T ss_pred HHHHHHHHHHhcCCEEEEecCCCC-C-CCCHHHHHHH---HHHHHhcCCC-eEEEEeh
Confidence 577777777778876655544321 0 1122333333 3444444767 9999953
No 196
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}
Probab=39.90 E-value=19 Score=31.72 Aligned_cols=57 Identities=18% Similarity=0.323 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCC------CCCCCHHHHHHHHHHHHHHHHc----CCCeeEEecCCC
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLD------ITYSSGKEVATLKRKLEQVAQF----GCRGFALLFDDI 87 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~------~~~s~~~d~~~L~~K~~ql~~l----Gvr~FailfDDi 87 (166)
..+-++||+++|++.|++|+.-.|| .| -.|. ..++..+.. .||.+| | ..+.|-||=-
T Consensus 102 k~Div~e~~~A~r~~Gl~~g~Y~s~-~dw~~~~~~~y~-~~~Y~~~~~--~Ql~ELlt~Yg-~i~~lW~Dg~ 168 (469)
T 3eyp_A 102 KGDVVREFVDACEEYGLKAGIYLGP-HDRHEHLSPLYT-TERYKEYYA--HQLGELMSDYG-KIWETWWDGA 168 (469)
T ss_dssp TCCHHHHHHHHHHHHTCEEEEEECS-SCHHHHTSTTCC-HHHHHHHHH--HHHHHHHHSSC-CCCEEECCCT
T ss_pred CCCHHHHHHHHHHHcCCeEEEEeCh-hHhCCCcCcccC-cHHHHHHHH--HHHHHHHhcCC-cccEEEeCCC
Confidence 3478999999999999999999998 32 2333 234544432 466665 5 3345556653
No 197
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=39.77 E-value=12 Score=31.65 Aligned_cols=28 Identities=11% Similarity=0.209 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHcCCC-CceEcccccccc
Q psy629 105 AQVSVTNEVFEHLGQP-KFMLCPTQYCST 132 (166)
Q Consensus 105 aq~~l~n~v~~~l~~~-~l~~cPt~Y~~~ 132 (166)
.|..++.++.+.|+-+ .++-|||.=-.|
T Consensus 173 QQl~vIrrmV~DL~~pVeIv~~PtvRe~D 201 (314)
T 3inn_A 173 QQLVIIRRMVDDMAIPVRIVGVETVREDD 201 (314)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEECCCBCTT
T ss_pred HHHHHHHHHHHHcCCceEEEecCcEECCC
Confidence 4667777777777765 589999985444
No 198
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=39.59 E-value=1.3e+02 Score=24.51 Aligned_cols=59 Identities=14% Similarity=0.292 Sum_probs=38.1
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEecCCC-C--C---CCCCHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALSPGL-D--I---TYSSGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~-~--~---~~s~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
.++.+.++ ++.+...+.|+... ++++.. . + .-..++.++.+.+-++.+.++|++...+.
T Consensus 51 ~~~~~~~~---~~~~~l~~~GL~i~-~~~~~~~~~~~~~~~~~r~~~i~~~~~~i~~a~~lG~~~v~~n 115 (367)
T 1tz9_A 51 VWTVAEIQ---ALKQSVEQEGLALL-GIESVAIHDAIKAGTDQRDHYIDNYRQTLRNLGKCGISLVCYS 115 (367)
T ss_dssp CCCHHHHH---HHHHHHHHTTCEEE-EECSCCCCHHHHHTCSTHHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCHHHHH---HHHHHHHHCCCeEE-EEecCCCcHHHhcCCcCHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 45655554 55555667899987 455321 1 1 11124567888888899999999998873
No 199
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=39.50 E-value=54 Score=27.93 Aligned_cols=61 Identities=16% Similarity=0.184 Sum_probs=39.3
Q ss_pred cCCCHHHHHHHHHHHHHHHHCCCeEEEEec--CCCCCCCC---CHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 20 DLYSVEEAEHLTGLISAAKEQGIDFYYALS--PGLDITYS---SGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 20 e~Yp~~~l~~l~~L~~~a~~~~v~Fv~ais--PG~~~~~s---~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
+.++.+++++++ +..+++|+.+...-+ +.-++.+. .++.++.+++-++.+.++|++..+..
T Consensus 59 ~~w~~~~i~~lk---~~l~~~GL~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~i~~aa~lGi~~v~~n 124 (386)
T 3bdk_A 59 QAWPLENILELK---KMVEEAGLEITVIESIPVHEDIKQGKPNRDALIENYKTSIRNVGAAGIPVVCYN 124 (386)
T ss_dssp SCCCHHHHHHHH---HHHHTTTCEEEEEECCCCCHHHHTTCTTHHHHHHHHHHHHHHHHTTTCCEEEEC
T ss_pred CCCCHHHHHHHH---HHHHHcCCEEEEEeccccccccccCcHHHHHHHHHHHHHHHHHHHcCCCEEEEc
Confidence 345665555554 556668999866432 11122222 25678889999999999999987753
No 200
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=39.19 E-value=34 Score=27.88 Aligned_cols=59 Identities=17% Similarity=0.278 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCee-----EEecCCCCCCCCHHHH
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGF-----ALLFDDIESEMSEADK 96 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~F-----ailfDDi~~~~~~~d~ 96 (166)
-+++++.++++|-++|+ .|-| |.|. ++-+ .-++-..+.||..+ +-..|--.+....+|.
T Consensus 172 ~l~E~~avAka~a~~g~----~lEPTGGIdl--~N~~------~I~~i~l~aGv~~viPHIYssIIDk~TG~TrpedV 237 (249)
T 3m0z_A 172 HRAEFEAVAKACAAHDF----WLEPTGGIDL--ENYS------EILKIALDAGVSKIIPHIYSSIIDKASGNTRPADV 237 (249)
T ss_dssp THHHHHHHHHHHHHTTC----EEEEBSSCCT--TTHH------HHHHHHHHHTCSCBCCBCCGGGBCTTTCCBCHHHH
T ss_pred cHHHHHHHHHHHHHcCc----eECCCCCccH--hhHH------HHHHHHHHcCCCeecccccceeccCCCCCCCHHHH
Confidence 47899999999999997 7888 5554 3322 23445678898864 3334444455555543
No 201
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=38.95 E-value=82 Score=25.72 Aligned_cols=29 Identities=7% Similarity=0.003 Sum_probs=26.6
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 22 YSVEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 22 Yp~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
+.++.++.++++++.|+++|+..+..+|-
T Consensus 77 ~~~~~l~~l~~~v~~a~~~Gi~vildlH~ 105 (345)
T 3ndz_A 77 IDQTWMKRVEEIANYAFDNDMYVIINLHH 105 (345)
T ss_dssp BCHHHHHHHHHHHHHHHTTTCEEEECCCS
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEEecCC
Confidence 45778999999999999999999999996
No 202
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=38.79 E-value=28 Score=29.01 Aligned_cols=30 Identities=7% Similarity=-0.011 Sum_probs=27.3
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.+.++.++.++++++.|.++|+..++.+|-
T Consensus 84 ~~d~~~l~~ld~vVd~a~~~Gi~vIldlH~ 113 (353)
T 3l55_A 84 NVDEAWMMRVKAIVEYAMNAGLYAIVNVHH 113 (353)
T ss_dssp CBCHHHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred CcCHHHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 356788999999999999999999999995
No 203
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=38.77 E-value=91 Score=23.77 Aligned_cols=56 Identities=20% Similarity=0.267 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHCCCeEEEEecCCCCCCCCC--H----HHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 28 EHLTGLISAAKEQGIDFYYALSPGLDITYSS--G----KEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~--~----~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
..++++.+.+++.|+.......++.+.++.+ + +.++.+.+-++....+|++.+.+.
T Consensus 47 ~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~ 108 (290)
T 2qul_A 47 AKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDDCHLLGAPVFAGL 108 (290)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred hhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEee
Confidence 4567777788899999876332122333332 2 345778888888899999998754
No 204
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A*
Probab=37.73 E-value=27 Score=30.59 Aligned_cols=24 Identities=25% Similarity=0.350 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEec
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALS 49 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~ais 49 (166)
..+-++||+++|++.|++|+.-.|
T Consensus 150 krDlv~El~~A~rk~Glk~GlY~S 173 (455)
T 2zxd_A 150 KRDLVGDLAKAVREAGLRFGVYYS 173 (455)
T ss_dssp CSCHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCChHHHHHHHHHHcCCeEEEEec
Confidence 347899999999999999999999
No 205
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=37.73 E-value=1.7e+02 Score=24.00 Aligned_cols=113 Identities=15% Similarity=0.167 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHH-----CCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCCCHHHHHHHh
Q psy629 26 EAEHLTGLISAAKE-----QGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESEMSEADKEVFQ 100 (166)
Q Consensus 26 ~l~~l~~L~~~a~~-----~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~~~~d~~~f~ 100 (166)
.++++++.++..++ ....|+.-..|+ .-.+....+=++.|...|++.-+|...-+-......+-.-+.
T Consensus 202 ~l~~~~~~~~~~~~~L~dp~~t~~vlVt~pe-------~~~~~ea~r~~~~L~~~gi~v~gvVvN~~~~p~~~~~~~~~~ 274 (334)
T 3iqw_A 202 KLDSLRVTISEVNAQFKDERLTTFVCVCIPE-------FLSLYETERMIQELANYGIDTHCIVVNQLLFPKPGSDCEQCT 274 (334)
T ss_dssp HHHHHHHHHHHHHHHHTCTTTEEEEEEECSS-------HHHHHHHHHHHHHHHHTTCCEEEEEEEEECCCCTTCCCHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCeeEEEEECCC-------ccHHHHHHHHHHHHHHCCCCccEEEECCCcCcccCCcCHHHH
Confidence 45555555554443 345688888883 334555666677777899999999876654210000001233
Q ss_pred hHHHHHHHHHHHHHHHcCC-CCceEccccccccccCCCCCChhHHHHHhhcc
Q psy629 101 SFAHAQVSVTNEVFEHLGQ-PKFMLCPTQYCSTRAVPNVKNSEYLNTLGSKL 151 (166)
Q Consensus 101 ~~a~aq~~l~n~v~~~l~~-~~l~~cPt~Y~~~~~~~~~~~~~Yl~~l~~~L 151 (166)
.....|...+++|.+.++. .++..+|-.-. ++.+.+=|+.|++.|
T Consensus 275 ~r~~~q~~~l~~i~~~~~~~~~~~~~pl~~~------e~~G~~~L~~~~~~l 320 (334)
T 3iqw_A 275 ARRRMQKKYLDQIEELYDEEFNVVKMPLLVE------EVRGKERLEKFSEML 320 (334)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSEEEEEECCSS------CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCEEEecCCCC------CCCCHHHHHHHHHHH
Confidence 4556799999999998887 67777776532 234556688887655
No 206
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=37.57 E-value=1.5e+02 Score=23.41 Aligned_cols=57 Identities=11% Similarity=-0.004 Sum_probs=33.3
Q ss_pred HHHHHHHCCCeEEEEe-cCCCC-CCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCC
Q psy629 33 LISAAKEQGIDFYYAL-SPGLD-ITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIES 89 (166)
Q Consensus 33 L~~~a~~~~v~Fv~ai-sPG~~-~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~ 89 (166)
+++...+.|+.+|.-- .++.. ..+-..+..+....=.+.|.++|.|.++++..+...
T Consensus 141 ~~~~l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~r~I~~i~~~~~~ 199 (355)
T 3e3m_A 141 TIRLLQRASIPIVEIWEKPAHPIGHTVGFSNERAAYDMTNALLARGFRKIVFLGEKDDD 199 (355)
T ss_dssp HHHHHHHCCSCEEEESSCCSSCSSEEEECCHHHHHHHHHHHHHHTTCCSEEEEEESSCT
T ss_pred HHHHHHhCCCCEEEECCccCCCCCCEEEeChHHHHHHHHHHHHHCCCCeEEEEccCccc
Confidence 3455677888888642 22211 100001223455555678889999999999776543
No 207
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=37.55 E-value=34 Score=28.24 Aligned_cols=59 Identities=17% Similarity=0.237 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCee-----EEecCCCCCCCCHHHH
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGF-----ALLFDDIESEMSEADK 96 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~F-----ailfDDi~~~~~~~d~ 96 (166)
-+++++.++++|-++|+ .|-| |.|. ++- + .-++-..+.||..+ +-..|--.+....+|.
T Consensus 195 ~leEl~avAkAca~~g~----~lEPTGGIdl--~Nf---~---~I~~i~l~aGv~~viPHIYsSIIDk~TG~TrpedV 260 (275)
T 3m6y_A 195 HEEEYRAVAKACAEEGF----ALEPTGGIDK--ENF---E---TIVRIALEANVEQVIPHVYSSIIDKETGNTKVEAV 260 (275)
T ss_dssp THHHHHHHHHHHHHHTC----EEEEBSSCCT--TTH---H---HHHHHHHHTTCSCBCCEECGGGBCTTTCCBCHHHH
T ss_pred cHHHHHHHHHHHHHcCc----eECCCCCccH--hHH---H---HHHHHHHHcCCCeecccccceeccCCCCCCCHHHH
Confidence 47899999999999997 7888 5554 332 2 23445678999874 3334444455555543
No 208
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=37.54 E-value=1.9e+02 Score=25.53 Aligned_cols=56 Identities=9% Similarity=-0.045 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCCCCCCCCH--HHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGLDITYSSG--KEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~--~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
-|+.|++..++.|++|+.=+.||...|-..+ -+... .=.+++.+-||+-+= .|.+.
T Consensus 95 Glk~Lad~ih~~GlKfGIw~~pG~~tC~~~pGsl~~~~--~da~~fa~WGVDylK--~D~c~ 152 (479)
T 3lrk_A 95 GMGHVADHLHNNSFLFGMYSSAGEYTCAGYPGSLGREE--EDAQFFANNRVDYLK--YDNCY 152 (479)
T ss_dssp CHHHHHHHHHHTTCEEEEEEESSSBCTTSSBCCTTCHH--HHHHHHHHTTCCEEE--EECTT
T ss_pred CHHHHHHHHHHCCCeeEEEecCccccccCCCchhHHHH--HHHHHHHHhCCcEEE--EccCC
Confidence 5999999999999999999999865443211 00111 114678999999987 56554
No 209
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=37.28 E-value=28 Score=28.70 Aligned_cols=29 Identities=3% Similarity=-0.058 Sum_probs=26.3
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 22 YSVEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 22 Yp~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
+.++.++.++++++.|+++|+..+..+|-
T Consensus 95 ~~~~~l~~l~~~v~~a~~~Gi~vild~H~ 123 (380)
T 1edg_A 95 ISDVWMNRVQEVVNYCIDNKMYVILNTHH 123 (380)
T ss_dssp ECHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEeCCC
Confidence 44778999999999999999999999994
No 210
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=36.86 E-value=1.3e+02 Score=23.41 Aligned_cols=52 Identities=8% Similarity=0.037 Sum_probs=28.7
Q ss_pred HHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCC
Q psy629 36 AAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDI 87 (166)
Q Consensus 36 ~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi 87 (166)
..++.|+.+|.-=++ +..+.+-..++.+.-..=.+.|.+.|.|.++++..+-
T Consensus 137 ~l~~~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~~~~ 190 (332)
T 2o20_A 137 SLKNSRTPVVLVGTIDGDKEIPSVNIDYHLAAYQSTKKLIDSGNKKIAYIMGSL 190 (332)
T ss_dssp HHHHHCCCEEEESCCCTTSCSCEEECCHHHHHHHHHHHHHHTTCSSEEEECSCT
T ss_pred HHHhCCCCEEEEccccCCCCCCEEEeChHHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 334567877765432 2222111112234444445667889999999987653
No 211
>4fqn_A Malcavernin; helical domain, harmonin-homology domain, protein-protein interaction, HOMO-dimer, protein binding; 1.90A {Homo sapiens}
Probab=36.80 E-value=68 Score=22.50 Aligned_cols=55 Identities=25% Similarity=0.474 Sum_probs=41.6
Q ss_pred ccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHH-------cCCCeeEEecCCCCCCC
Q psy629 19 RDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQ-------FGCRGFALLFDDIESEM 91 (166)
Q Consensus 19 re~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~-------lGvr~FailfDDi~~~~ 91 (166)
|.--+..|+++++.|....+. |++ ++...+||-+||- +|.|.| .
T Consensus 26 ~~~L~~~ElqqFA~Llr~YR~-----------G~~--------I~~Fc~kLl~LyG~~Rk~LL~gmRpF----------I 76 (98)
T 4fqn_A 26 RTKLSSQEIQQFAALLHEYRN-----------GAS--------IHEFCINLRQLYGDSRKFLLLGLRPF----------I 76 (98)
T ss_dssp TTTSCHHHHHHHHHHHHHHHT-----------TCC--------HHHHHHHHHHHHCGGGGGGGGGGGGG----------S
T ss_pred HhhcChHHHHHHHHHHHHHHc-----------CCC--------HHHHHHHHHHHhchHHHHHHhhccCC----------C
Confidence 455678899999999999886 322 5788999999985 677776 4
Q ss_pred CHHHHHHHhhH
Q psy629 92 SEADKEVFQSF 102 (166)
Q Consensus 92 ~~~d~~~f~~~ 102 (166)
++.|...|.++
T Consensus 77 p~~Di~~FesF 87 (98)
T 4fqn_A 77 PEKDSQHFENF 87 (98)
T ss_dssp CHHHHHHHHHH
T ss_pred ChhhHHHHHHH
Confidence 56677777665
No 212
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=36.40 E-value=1.6e+02 Score=23.33 Aligned_cols=53 Identities=15% Similarity=0.215 Sum_probs=32.6
Q ss_pred HHHHHHHCCCeEEEEecCC--CCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 33 LISAAKEQGIDFYYALSPG--LDITYSSGKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 33 L~~~a~~~~v~Fv~aisPG--~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
.++...+.|+.+|.-=++. ..+.+=..+..+.-..=.+.|.++|.|.++++..
T Consensus 143 ~~~~l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~r~I~~i~~ 197 (366)
T 3h5t_A 143 HIDAIRARGLPAVIADQPAREEGMPFIAPNNRKAIAPAAQALIDAGHRKIGILSI 197 (366)
T ss_dssp HHHHHHHHTCCEEEESSCCSCTTCCEEEECHHHHTHHHHHHHHHTTCCSEEEEEE
T ss_pred HHHHHHHCCCCEEEECCccCCCCCCEEEeChHHHHHHHHHHHHHCCCCcEEEEec
Confidence 3455566788887654432 2222111233455566667888999999999973
No 213
>4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A*
Probab=36.35 E-value=61 Score=27.49 Aligned_cols=62 Identities=16% Similarity=0.222 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCCCCC-CC--------CHHHHHHHHHHHHHHHHcCCCeeEEe-cCCCCCC
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGLDIT-YS--------SGKEVATLKRKLEQVAQFGCRGFALL-FDDIESE 90 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~~~~-~s--------~~~d~~~L~~K~~ql~~lGvr~Fail-fDDi~~~ 90 (166)
.++.+++.|+++|+.|+-+++||-+-. .. ...+-+.+.+.++++.+.|++-.-|. |+|....
T Consensus 266 ~~~~~~~~~~~~g~~y~P~V~PGf~~t~~~~~n~~n~~~R~~g~~~~~~~~~a~~~~~~~V~I~sWNEw~EG 337 (380)
T 4ad1_A 266 NWVSMQKWAKENGKIFIPSVGPGYIDTRIRPWNGSVIRTRTDGQYYDAMYRKAIEAGVSAISITSFNEWHEG 337 (380)
T ss_dssp GHHHHHHHHHHTTCEEECEECSCBCCTTTCTTCGGGCBCCGGGHHHHHHHHHHHHTTCSCEEESCSSCTTTT
T ss_pred hHHHHHHHHHHCCCeEEeEeccCCcCCCCCCCCCCccccCCCHHHHHHHHHHHHhcCCCEEEEEeccccccc
Confidence 355777888889999999999987521 10 11233567788899999999885554 8887743
No 214
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=36.25 E-value=33 Score=29.35 Aligned_cols=24 Identities=21% Similarity=0.375 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.++|++||++|+++||+.+.=+-|
T Consensus 82 ~~df~~Lv~~aH~~Gi~VilD~V~ 105 (485)
T 1wpc_A 82 RSQLQAAVTSLKNNGIQVYGDVVM 105 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEec
Confidence 689999999999999999887755
No 215
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=36.23 E-value=72 Score=26.01 Aligned_cols=54 Identities=17% Similarity=0.241 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHCCCe---EEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCee
Q psy629 24 VEEAEHLTGLISAAKEQGID---FYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGF 80 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~---Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~F 80 (166)
++-++.|++.++.|.+.||. .++= ||..+ -.+.++--.|++.+..+.++|+.-+
T Consensus 159 ~ev~~~l~~~i~~a~~~Gi~~~~IilD--Pg~gf-~k~~~~n~~ll~~l~~~~~~g~P~l 215 (282)
T 1aj0_A 159 AEVNRYFIEQIARCEQAGIAKEKLLLD--PGFGF-GKNLSHNYSLLARLAEFHHFNLPLL 215 (282)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEE--CCTTS-SCCHHHHHHHHHTGGGGGGGCSCBE
T ss_pred HHHHHHHHHHHHHHHHcCCChhhEEEe--CCCCc-ccCHHHHHHHHHHHHHHhcCCCCEE
Confidence 34578999999999999996 6654 98776 2245566788889999998887653
No 216
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=36.15 E-value=1.4e+02 Score=29.14 Aligned_cols=66 Identities=15% Similarity=0.100 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCCCC-CCC-CHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCCCHH
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGLDI-TYS-SGKEVATLKRKLEQVAQFGCRGFALLFDDIESEMSEA 94 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~~~-~~s-~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~~~~ 94 (166)
+++++..++.+++.|....++|+-..++ +-+ ...+.+-+++-++++.++|++.++ +=|.-+.+.+.
T Consensus 671 ~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~--l~DT~G~~~P~ 738 (1165)
T 2qf7_A 671 VENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIA--VKDMAGLLKPA 738 (1165)
T ss_dssp GGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEEE--EEETTCCCCHH
T ss_pred HHHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEE--EeCccCCcCHH
Confidence 5788899999999998888888764432 221 124678888899999999999876 55666665543
No 217
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=36.12 E-value=33 Score=29.28 Aligned_cols=24 Identities=21% Similarity=0.268 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.++|++||++|+++||+.+.=+-|
T Consensus 80 ~~df~~lv~~aH~~Gi~VilD~V~ 103 (480)
T 1ud2_A 80 KAQLERAIGSLKSNDINVYGDVVM 103 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcc
Confidence 689999999999999999887765
No 218
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum}
Probab=36.09 E-value=90 Score=26.88 Aligned_cols=50 Identities=6% Similarity=0.094 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHc
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQF 75 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~l 75 (166)
.++.|+++++.|.++|+..+.-+|.+....+.+.+....+.+.+.+-+.-
T Consensus 78 ~l~~ld~vv~~a~~~Gl~VIlD~H~~~~~~~~~~~~~~~~w~~iA~ryk~ 127 (491)
T 2y8k_A 78 AVNEIDKIVERTRELGLYLVITIGNGANNGNHNAQWARDFWKFYAPRYAK 127 (491)
T ss_dssp THHHHHHHHHHHHHHTCEEEEEEECTTCTTCCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCCCccccHHHHHHHHHHHHHHhCC
Confidence 58999999999999999999999986432223445556666666555543
No 219
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=36.00 E-value=19 Score=30.47 Aligned_cols=39 Identities=15% Similarity=0.118 Sum_probs=28.3
Q ss_pred EEEecCC--CCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 45 YYALSPG--LDITYSSGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 45 v~aisPG--~~~~~s~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
+|-|+|+ .+-+-+..-+++.|.+||+.|.+|||+..-|.
T Consensus 3 iYei~~~~F~~~~~~g~Gd~~gi~~~LdyL~~LGv~~I~L~ 43 (441)
T 1lwj_A 3 GYQIYVRSFRDGNLDGVGDFRGLKNAVSYLKELGIDFVWLM 43 (441)
T ss_dssp EEEECHHHHCCSSSSSSCCHHHHHHTHHHHHHTTCCEEEEC
T ss_pred EEEEehHHhcCCCCCCccCHHHHHHhhHHHHHcCCCEEEeC
Confidence 5777772 22111123579999999999999999998875
No 220
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=35.91 E-value=1.3e+02 Score=26.87 Aligned_cols=95 Identities=16% Similarity=0.213 Sum_probs=61.0
Q ss_pred cCCCHHHHHHHHHHHHHHHHCCCeEEEEec-CC-----------CC----------------------CCCCCHHHHHHH
Q psy629 20 DLYSVEEAEHLTGLISAAKEQGIDFYYALS-PG-----------LD----------------------ITYSSGKEVATL 65 (166)
Q Consensus 20 e~Yp~~~l~~l~~L~~~a~~~~v~Fv~ais-PG-----------~~----------------------~~~s~~~d~~~L 65 (166)
..|+.+ +++++++.|++.||+.+=-|- || +. +|- +++-++-|
T Consensus 219 g~YT~~---di~eIv~YA~~rgI~VIPEID~PGH~~a~l~aypeL~~~~~~d~~~~~~~~~~g~~~~~L~p-~~~ty~fl 294 (543)
T 3rcn_A 219 GFYTQD---DLREIVAFAADRHITVIPEIDVPGHSQAAIAAYPELGAGPADGSSPVEVWTRWGINETVLEV-SETSLEFY 294 (543)
T ss_dssp CCBCHH---HHHHHHHHHHHTTCEEEEECCCSSSCHHHHHHCGGGSCCC----CCCCCCCSCSCCSCCCCC-SHHHHHHH
T ss_pred CCcCHH---HHHHHHHHHHHcCCEEeeeeccchhHHHHHHhChhhccCccccCcccccccccCcCCCccCC-CHHHHHHH
Confidence 356655 567889999999999985552 22 10 222 56777777
Q ss_pred HHHHHHHHHcCC-CeeEEecCCCCCC---CCHHH-----HHHHhhHHHHHHHHHHHHHHHcC
Q psy629 66 KRKLEQVAQFGC-RGFALLFDDIESE---MSEAD-----KEVFQSFAHAQVSVTNEVFEHLG 118 (166)
Q Consensus 66 ~~K~~ql~~lGv-r~FailfDDi~~~---~~~~d-----~~~f~~~a~aq~~l~n~v~~~l~ 118 (166)
.+=|+.+.++=. +.|=|-.|.+... .|+.- .+.+++....|.++++++.+.+.
T Consensus 295 ~~v~~Ev~~lFp~~~iHiGgDE~~~~~W~~~p~~~~~m~~~g~~~~~~L~~~f~~~v~~~l~ 356 (543)
T 3rcn_A 295 RNVLDEVVEIFPSPWISLGGDEVPLTQWQASAQAQAKAAELGLDDVSGLHSWFVGQLALHLK 356 (543)
T ss_dssp HHHHHHHHHHCCCSEEEEECCCCCSHHHHTCHHHHHHHHHHTCSSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCceEEEccccccccccccCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 777777777533 4578888988743 12221 12233445778889999887664
No 221
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=35.76 E-value=30 Score=28.53 Aligned_cols=29 Identities=7% Similarity=0.119 Sum_probs=26.4
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 22 YSVEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 22 Yp~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
+.++.++.++++++.|+++|+..++.+|-
T Consensus 104 ~~~~~l~~~d~~v~~a~~~Gi~vild~h~ 132 (395)
T 2jep_A 104 INAAWLNRIQQVVDYAYNEGLYVIINIHG 132 (395)
T ss_dssp BCHHHHHHHHHHHHHHHTTTCEEEECCCG
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 45788999999999999999999999995
No 222
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=35.59 E-value=34 Score=29.23 Aligned_cols=24 Identities=13% Similarity=0.227 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.++|++||++|+++||+.+.=+-|
T Consensus 78 ~~df~~lv~~aH~~Gi~VilD~V~ 101 (483)
T 3bh4_A 78 KSELQDAIGSLHSRNVQVYGDVVL 101 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcc
Confidence 689999999999999999887655
No 223
>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482}
Probab=35.45 E-value=24 Score=30.90 Aligned_cols=28 Identities=4% Similarity=0.173 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCC
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLD 53 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~ 53 (166)
..+-++||+++|++.|++|+.-.||..+
T Consensus 107 ~~D~v~e~~~A~r~~gl~~g~Y~S~~W~ 134 (443)
T 3gza_A 107 KGDIVRDFVNSCRKYGLQPGIYIGIRWN 134 (443)
T ss_dssp TCCHHHHHHHHHHHHTCEEEEEECCSCB
T ss_pred CcCHHHHHHHHHHHcCCeEEEEECcccc
Confidence 3578999999999999999999999543
No 224
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=35.43 E-value=1.6e+02 Score=23.04 Aligned_cols=54 Identities=7% Similarity=-0.011 Sum_probs=30.7
Q ss_pred HHHHHHHCCCeEEEEecC-CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCC
Q psy629 33 LISAAKEQGIDFYYALSP-GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDD 86 (166)
Q Consensus 33 L~~~a~~~~v~Fv~aisP-G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDD 86 (166)
+++.+++.|+.+|.--.+ .....+-..++.+.-..=.+.|.+.|.|.++++..+
T Consensus 133 ~~~~l~~~~iPvV~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~~~ 187 (339)
T 3h5o_A 133 FERILSQHALPVVYMMDLADDGRCCVGFSQEDAGAAITRHLLSRGKRRIGFLGAQ 187 (339)
T ss_dssp HHHHHHHTTCCEEEEESCCSSSCCEEECCHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred HHHHHhcCCCCEEEEeecCCCCCeEEEECHHHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 344566778887764322 111111111233455555677889999999998654
No 225
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=35.33 E-value=42 Score=25.53 Aligned_cols=54 Identities=17% Similarity=0.100 Sum_probs=30.5
Q ss_pred HHHHHHCCCeEEEEecC--CCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCC
Q psy629 34 ISAAKEQGIDFYYALSP--GLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDI 87 (166)
Q Consensus 34 ~~~a~~~~v~Fv~aisP--G~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi 87 (166)
++.+++.|+.+|.-=++ +..+.+-.....+....=.+.|.+.|.+.++++..+-
T Consensus 73 ~~~l~~~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~i~~i~~~~ 128 (277)
T 3cs3_A 73 IEKFAERGHSIVVLDRTTEHRNIRQVLLDNRGGATQAIEQFVNVGSKKVLLLSGPE 128 (277)
T ss_dssp HHHHHHTTCEEEESSSCCCSTTEEEEEECHHHHHHHHHHHHHHTTCSCEEEEECCT
T ss_pred HHHHHhcCCCEEEEecCCCCCCCCEEEeCcHHHHHHHHHHHHHcCCceEEEEeCCc
Confidence 34455689988765433 2121111112234444445677888999999987653
No 226
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=34.87 E-value=86 Score=25.98 Aligned_cols=55 Identities=18% Similarity=0.260 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCC-C----CCCCHHHHHHHHHHHHHHH----HcC--CCeeEE
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLD-I----TYSSGKEVATLKRKLEQVA----QFG--CRGFAL 82 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~-~----~~s~~~d~~~L~~K~~ql~----~lG--vr~Fai 82 (166)
.++.+++.++.|++.|++.+. ++||.. . .-+.++.++.+.+-|.++. +.| |+ ++|
T Consensus 114 ~i~~~~~~i~~A~~LGa~~vv-v~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~-l~l 179 (394)
T 1xla_A 114 ALAKVLHNIDLAAEMGAETFV-MWGGREGSEYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLR-IAL 179 (394)
T ss_dssp HHHHHHHHHHHHHHTTCSEEE-ECCTTCEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCE-EEE
T ss_pred HHHHHHHHHHHHHHhCCCEEE-ECCCCCccccccccCHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEE
Confidence 468899999999999999664 678753 1 1123466777777777776 467 65 443
No 227
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=34.77 E-value=1.6e+02 Score=23.02 Aligned_cols=55 Identities=11% Similarity=0.034 Sum_probs=32.7
Q ss_pred HHHHHHHCCCeEEEE-ecCCCC-CCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCC
Q psy629 33 LISAAKEQGIDFYYA-LSPGLD-ITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDI 87 (166)
Q Consensus 33 L~~~a~~~~v~Fv~a-isPG~~-~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi 87 (166)
+++..++.|+.+|.- =.++.. ..+-..++.+.-..=.+.|.+.|.|.++++....
T Consensus 139 ~~~~l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~~~~ 195 (344)
T 3kjx_A 139 ARAMLDAAGIPVVEIMDSDGKPVDAMVGISHRRAGREMAQAILKAGYRRIGFMGTKM 195 (344)
T ss_dssp HHHHHHHCSSCEEEEEECSSCCSSEEEEECHHHHHHHHHHHHHHHTCCSCCEEESST
T ss_pred HHHHHHhCCCCEEEEeCCCCCCCCCEEEECcHHHHHHHHHHHHHCCCCeEEEEecCc
Confidence 455567788888765 223221 1110112345555556678889999999987654
No 228
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=34.59 E-value=67 Score=26.65 Aligned_cols=50 Identities=14% Similarity=0.164 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecCCCC-CC----CCCHHHHHHHHHHHHHHHHc
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALSPGLD-IT----YSSGKEVATLKRKLEQVAQF 75 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~aisPG~~-~~----~s~~~d~~~L~~K~~ql~~l 75 (166)
..++.+++.++.|++.|++.+. ++||.. .. .+..+.++.+.+-|..+.+.
T Consensus 113 ~~i~~~~~~i~~A~~LGa~~vv-~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~ 167 (393)
T 1xim_A 113 YAIRKVLRQMDLGAELGAKTLV-LWGGREGAEYDSAKDVSAALDRYREALNLLAQY 167 (393)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEE-EECTTSEESSGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEE-ECCCCCCCcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 3468999999999999999884 667632 11 12245667777777777654
No 229
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=34.56 E-value=37 Score=28.07 Aligned_cols=29 Identities=7% Similarity=0.031 Sum_probs=26.3
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 22 YSVEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 22 Yp~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
+.++.++.++++++.|+++|+..+..+|-
T Consensus 97 ~~~~~l~~~~~vv~~a~~~Gi~vildlH~ 125 (376)
T 3ayr_A 97 IDEKWLKRVHEVVDYPYKNGAFVILNLHH 125 (376)
T ss_dssp BCHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 34677999999999999999999999996
No 230
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=34.46 E-value=1.2e+02 Score=24.96 Aligned_cols=57 Identities=9% Similarity=0.012 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCC--CHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALSPGLDITYS--SGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s--~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
+..+.|.++++.+++.++++++ +-|--+... +.+.+..+.+-|.+|.+.|+.-+.|.
T Consensus 44 ~~~~~l~~~v~~~~~~~~D~Vl--iaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~pv~~v~ 102 (386)
T 3av0_A 44 DIYDSFKLCIKKILEIKPDVVL--HSGDLFNDLRPPVKALRIAMQAFKKLHENNIKVYIVA 102 (386)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEE--ECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHHHHcCCCEEE--ECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEc
Confidence 3457799999999999999874 566544333 23456677777888888888777775
No 231
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=34.40 E-value=1.7e+02 Score=23.00 Aligned_cols=54 Identities=17% Similarity=0.270 Sum_probs=37.0
Q ss_pred HHHHHHHHHHCCCeEEEEec-CCCCCCCCC--------------HHHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 30 LTGLISAAKEQGIDFYYALS-PGLDITYSS--------------GKEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 30 l~~L~~~a~~~~v~Fv~ais-PG~~~~~s~--------------~~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
.+++.+..+++|+..+ ++| |..+....+ ++.++.+.+-++....+|++...+..
T Consensus 61 ~~~~~~~l~~~GL~v~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~ 129 (303)
T 3l23_A 61 MMDFKKMAEDAGLKII-SSHVNPVDTSISDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQPM 129 (303)
T ss_dssp HHHHHHHHHHTTCEEE-EEECCCBCTTCSSTTTTBCCSCCTTTHHHHHHHHHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHHHcCCeEE-EEecccccccccCcccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 4666777888999985 344 332211111 34578888899999999999988753
No 232
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=34.13 E-value=51 Score=26.33 Aligned_cols=51 Identities=12% Similarity=0.069 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCe--eEEec
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRG--FALLF 84 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~--Failf 84 (166)
.++++++.+++.|++.+..-|=+..- -..+.|.++++++.++|++. +++--
T Consensus 127 ~~~~l~~~~~~~~~kvI~S~Hdf~~t-----P~~~el~~~~~~~~~~gaDivKia~~a 179 (257)
T 2yr1_A 127 RIADVRRMTEECSVWLVVSRHYFDGT-----PRKETLLADMRQAERYGADIAKVAVMP 179 (257)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEESSCC-----CCHHHHHHHHHHHHHTTCSEEEEEECC
T ss_pred hHHHHHHHHHhCCCEEEEEecCCCCC-----cCHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 56788888899999999998843221 11467899999999999775 55443
No 233
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=33.91 E-value=1.2e+02 Score=23.76 Aligned_cols=63 Identities=13% Similarity=0.152 Sum_probs=41.0
Q ss_pred CCHHHHH-HHHHHHHHHHHCCCeEEEEecC--CC-CCCCCC--H----HHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 22 YSVEEAE-HLTGLISAAKEQGIDFYYALSP--GL-DITYSS--G----KEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 22 Yp~~~l~-~l~~L~~~a~~~~v~Fv~aisP--G~-~~~~s~--~----~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
||....+ .++++.+.+++.|+...-..++ +. ..++.+ + +.++.+.+-++....+|++...+-+
T Consensus 63 ~~~~~~~~~~~~~~~~l~~~Gl~i~~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~ 135 (316)
T 3qxb_A 63 WPDIERDRRAIAYAKAFRKAGLTIESTFGGLASYTYNHFLAPTLELQSLGYQHLKRAIDMTAAMEVPATGMPF 135 (316)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHTSCBTTCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred ccccchhhHHHHHHHHHHHcCCeEEEeeccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEecC
Confidence 4444333 6788888999999997543222 22 223332 2 3456788888888999999987544
No 234
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=33.49 E-value=1.6e+02 Score=22.56 Aligned_cols=120 Identities=14% Similarity=0.196 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCC-----CCCCCC--H----HHHHHHHHHHHHHHHcCCCeeEEecCCCCCCCCHHHHH
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGL-----DITYSS--G----KEVATLKRKLEQVAQFGCRGFALLFDDIESEMSEADKE 97 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~-----~~~~s~--~----~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~~~~d~~ 97 (166)
.++++.+..++.|+.+ .++++++ ..++.+ + +.++.+.+-++....+|++.+.....-....... .+
T Consensus 69 ~~~~~~~~l~~~gl~~-~~~~~~~p~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~g~~~~~~~--~~ 145 (290)
T 2zvr_A 69 DWNEVKILSEELNLPI-CAIGTGQAYLADGLSLTHPNDEIRKKAIERVVKHTEVAGMFGALVIIGLVRGRREGRSY--EE 145 (290)
T ss_dssp CHHHHHHHHHHHTCCE-EEEECTHHHHTTCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEESGGGCCCTTSCH--HH
T ss_pred hHHHHHHHHHHcCCeE-EEEeccCccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCCCCCcCH--HH
Confidence 4566777788889985 3455421 334432 2 2367777778888889999876331111111111 11
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCceEcccc-ccccccCCCCCChhHHHHHhhccC-CCceEEe
Q psy629 98 VFQSFAHAQVSVTNEVFEHLGQPKFMLCPTQ-YCSTRAVPNVKNSEYLNTLGSKLA-KEIDIMW 159 (166)
Q Consensus 98 ~f~~~a~aq~~l~n~v~~~l~~~~l~~cPt~-Y~~~~~~~~~~~~~Yl~~l~~~L~-~~i~i~W 159 (166)
.+ ..-++.++++.+......+.+=|.. |.... ......+..|-+.++ ++|.+.+
T Consensus 146 ~~----~~~~~~l~~l~~~a~~v~l~lEn~~~~~~~~----~~~~~~~~~l~~~~~~~~vgl~~ 201 (290)
T 2zvr_A 146 TE----ELFIESMKRLLELTEHAKFVIEPLNRYETDF----INTIDDALRILRKINSNRVGILA 201 (290)
T ss_dssp HH----HHHHHHHHHHHHHCSSCCEEECCCCTTTCSS----CCSHHHHHHHHHHHCCTTEEEEE
T ss_pred HH----HHHHHHHHHHHHHhccCEEEEEeCCCcCccc----cCCHHHHHHHHHHcCCCCEEEEE
Confidence 12 2234556666666554223332331 21111 122344445545565 5677665
No 235
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=33.32 E-value=1e+02 Score=25.42 Aligned_cols=48 Identities=15% Similarity=0.145 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCC-C----CCCCHHHHHHHHHHHHHHHH
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLD-I----TYSSGKEVATLKRKLEQVAQ 74 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~-~----~~s~~~d~~~L~~K~~ql~~ 74 (166)
.++.+++.++.|++.|++.+. ++||.. . .-+.++.++.+...|.++.+
T Consensus 114 ~i~~~~~~i~~A~~LGa~~vv-v~~g~~~~~~~~~~~~~~~~~~~~e~L~~l~~ 166 (386)
T 1muw_A 114 ALRKTIRNIDLAVELGAKTYV-AWGGREGAESGAAKDVRVALDRMKEAFDLLGE 166 (386)
T ss_dssp HHHHHHHHHHHHHHHTCSEEE-ECCTTCEESSTTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEE-ECCCCCcccccccCCHHHHHHHHHHHHHHHHH
Confidence 468999999999999999754 677753 1 11234566777777777654
No 236
>1vpq_A Hypothetical protein TM1631; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.1.32.1
Probab=33.24 E-value=1.9e+02 Score=23.24 Aligned_cols=54 Identities=19% Similarity=0.268 Sum_probs=39.3
Q ss_pred HHHHHHHHCCCeEEEEecCC----CC------------------C---------CCC---CHHHHHHHHHHHHHHHHcCC
Q psy629 32 GLISAAKEQGIDFYYALSPG----LD------------------I---------TYS---SGKEVATLKRKLEQVAQFGC 77 (166)
Q Consensus 32 ~L~~~a~~~~v~Fv~aisPG----~~------------------~---------~~s---~~~d~~~L~~K~~ql~~lGv 77 (166)
++.+..++.||.+|++=+|+ .. - .|. ++++++.+.+|+.++.+-|-
T Consensus 165 ~~~~lL~~~~v~~V~~D~~~~~~~~P~~~~~t~~~~yvRlHG~~~~~w~~~~~~~y~~~Y~~~eL~~wa~~i~~~~~~~~ 244 (273)
T 1vpq_A 165 ETYEFLRNHGITFVVVDEPKLPGLFPYRPITTTDYAYFRFHGRNERWFEAEGEERYDYLYSEEELKTLFEDVVELSRRVK 244 (273)
T ss_dssp HHHHHHHHHTCEEEEEECCCCTTBCCCCCCCSSSEEEEEECCCCTTTTTCCGGGTTCCCCCHHHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHcCcEEEEeCCCCCCCCCCcccccCCCceEEEEeCCCccccccccccccccCCCHHHHHHHHHHHHHHHhcCC
Confidence 67778889999999988876 21 1 222 46889999999999887774
Q ss_pred CeeEEecCC
Q psy629 78 RGFALLFDD 86 (166)
Q Consensus 78 r~FailfDD 86 (166)
+ --|+|+.
T Consensus 245 ~-vyv~FnN 252 (273)
T 1vpq_A 245 E-TYVFFNN 252 (273)
T ss_dssp E-EEEEECC
T ss_pred C-EEEEEeC
Confidence 4 4455554
No 237
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=33.11 E-value=40 Score=28.60 Aligned_cols=23 Identities=30% Similarity=0.371 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHCCCeEEEEec
Q psy629 27 AEHLTGLISAAKEQGIDFYYALS 49 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~ais 49 (166)
.++|++|+++|+++||+.+.=+-
T Consensus 86 ~~df~~lv~~~H~~Gi~VilD~V 108 (435)
T 1mxg_A 86 KEELVRLIQTAHAYGIKVIADVV 108 (435)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEC
Confidence 68999999999999999876543
No 238
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=33.08 E-value=2.3e+02 Score=24.22 Aligned_cols=52 Identities=12% Similarity=0.160 Sum_probs=37.3
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHH
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQ 74 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~ 74 (166)
+|+++.++.|+++++.|.++|+..+.-+|.... +......+...+-+.+|.+
T Consensus 65 ~~~~~~l~~ld~vv~~a~~~Gl~VIlDlH~~~g--~~~~~~~~~~~~~w~~iA~ 116 (464)
T 1wky_A 65 QWTKDDIQTVRNLISLAEDNNLVAVLEVHDATG--YDSIASLNRAVDYWIEMRS 116 (464)
T ss_dssp SSCCCCHHHHHHHHHHHHHTTCEEEEEECTTTT--CCCHHHHHHHHHHHHHTGG
T ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEEEecCCCC--CCChHHHHHHHHHHHHHHH
Confidence 455567899999999999999999999996321 2333455566666666643
No 239
>3bma_A D-alanyl-lipoteichoic acid synthetase; structural genomics, D-alanyl-lipoteichoic acid biosynthesis structure initiative, PSI-2; 2.24A {Streptococcus pneumoniae}
Probab=33.01 E-value=58 Score=28.21 Aligned_cols=58 Identities=12% Similarity=0.183 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecCCCC--CCCC--CHHHHHHHHHHHHHHHH-cCCCeeE
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSPGLD--ITYS--SGKEVATLKRKLEQVAQ-FGCRGFA 81 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~--~~~s--~~~d~~~L~~K~~ql~~-lGvr~Fa 81 (166)
..|.+.|.-+.+.+++.||+..+-|-|-+. ..|. +.+.++...+|+..+.+ .|+...+
T Consensus 272 SpEy~Dlql~L~~~k~~~~~vlfVi~PVNgkWydytGl~~e~r~~~~~KIk~~l~s~Gf~~i~ 334 (407)
T 3bma_A 272 SPEYNDLQLVLTQFSKSKVNPIFIIPPVNKKWMDYAGLREDMYQQTVQKIRYQLESQGFTNIA 334 (407)
T ss_dssp CTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHTTCCHHHHHHHHHHHHHHHHTTTCCCEE
T ss_pred CccHHHHHHHHHHHHHcCCceEEEEeCCchHHHHhcCCCHHHHHHHHHHHHHHHHHCCCccee
Confidence 447999999999999999999999999442 2222 36789999999987665 9994444
No 240
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=32.82 E-value=41 Score=29.17 Aligned_cols=24 Identities=21% Similarity=0.267 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.++|++||++|+++||+.+.=+-|
T Consensus 81 ~~dfk~Lv~~aH~~Gi~VilD~V~ 104 (515)
T 1hvx_A 81 KAQYLQAIQAAHAAGMQVYADVVF 104 (515)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEec
Confidence 689999999999999999987766
No 241
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=32.71 E-value=79 Score=26.17 Aligned_cols=53 Identities=28% Similarity=0.379 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHCCCeE-EEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCee
Q psy629 27 AEHLTGLISAAKEQGIDF-YYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGF 80 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~F-v~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~F 80 (166)
++.|++.++.|.+.||.- -.-|-||..+--+. ++--.|++.++.+..+|+.-+
T Consensus 178 ~~~l~~~i~~a~~~GI~~~~IilDPGiGF~kt~-~~nl~ll~~l~~l~~~g~PvL 231 (314)
T 2vef_A 178 EAFFERALARAAEAGIAPENILLDPGIGFGLTK-KENLLLLRDLDKLHQKGYPIF 231 (314)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEECCTTSSCCH-HHHHHHHHTHHHHHTTSSCBE
T ss_pred HHHHHHHHHHHHHcCCChhhEEEeCCCCcccch-HHHHHHHHHHHHhhcCCCCEE
Confidence 577999999999999942 22388988765443 455778899999999997653
No 242
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=32.63 E-value=76 Score=25.90 Aligned_cols=44 Identities=20% Similarity=0.366 Sum_probs=30.6
Q ss_pred CCCHHHHHHHHHHHH--------HHHHcCCCeeEEecCCCCCCCCHHHHHHHh
Q psy629 56 YSSGKEVATLKRKLE--------QVAQFGCRGFALLFDDIESEMSEADKEVFQ 100 (166)
Q Consensus 56 ~s~~~d~~~L~~K~~--------ql~~lGvr~FailfDDi~~~~~~~d~~~f~ 100 (166)
+.+++.+.+|+.++. .+.+.|++.+.+ ||+..+.++.++.+.|.
T Consensus 172 ~~~Pe~~~~ll~~l~~~~~~~~~~~~~aGad~i~i-~d~~~~~lsp~~f~ef~ 223 (354)
T 3cyv_A 172 YADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMI-FDTWGGVLTGRDYQQFS 223 (354)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEE-ECTTGGGSCHHHHHHHT
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE-eCCccccCCHHHHHHHh
Confidence 345666777776654 445899997765 68887778877766663
No 243
>2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp}
Probab=32.45 E-value=49 Score=28.54 Aligned_cols=64 Identities=20% Similarity=0.234 Sum_probs=43.4
Q ss_pred ccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCC----CCC----CHHHHHHHHH-HHH-HHHHcCCCeeEEe
Q psy629 19 RDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDI----TYS----SGKEVATLKR-KLE-QVAQFGCRGFALL 83 (166)
Q Consensus 19 re~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~----~~s----~~~d~~~L~~-K~~-ql~~lGvr~Fail 83 (166)
+..|-++...-|...+++.++.||. +++|+|.+-- .+. +.++...+++ -|. .|.+.|...--|+
T Consensus 163 ~~~~y~~yA~Ylvk~i~~y~~~Gi~-i~~is~qNEP~~~~~~~s~~~t~~~~~~fik~~L~p~l~~~gl~~~kI~ 236 (447)
T 2wnw_A 163 RRECYADWADIIINYLLEYRRHGIN-VQALSVQNEPVAVKTWDSCLYSVEEETAFAVQYLRPRLARQGMDEMEIY 236 (447)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHTTCC-CCEEESCSSTTCCCSSBCCBCCHHHHHHHHHHTHHHHHHHTTCTTCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCC-eeEEeeeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhcCCCCceEE
Confidence 4457778889999999999999999 8999996522 121 2345555554 453 6677787433333
No 244
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=32.24 E-value=1.5e+02 Score=23.62 Aligned_cols=27 Identities=7% Similarity=0.073 Sum_probs=21.1
Q ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEec
Q psy629 23 SVEEAEHLTGLISAAKEQGIDFYYALS 49 (166)
Q Consensus 23 p~~~l~~l~~L~~~a~~~~v~Fv~ais 49 (166)
++...+.+.++++.+++.|+.+++-.+
T Consensus 166 ~~~~~~~~~~~~~~a~~~g~~v~~Dp~ 192 (336)
T 4du5_A 166 SATTLPAARKTMDLMRAAGRSVSFDPN 192 (336)
T ss_dssp CTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred ChHHHHHHHHHHHHHHHCCCEEEEeCc
Confidence 344567788999999999998887655
No 245
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=32.05 E-value=32 Score=30.20 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=29.8
Q ss_pred EEEEecCCC--CCCCCCHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 44 FYYALSPGL--DITYSSGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 44 Fv~aisPG~--~~~~s~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
.+|-|+|+. +-+-+..-+++.|.+||+.|.+|||+..-|.
T Consensus 11 viYqi~~~~F~~~~~dg~Gdl~gi~~~Ldyl~~LGv~~I~L~ 52 (557)
T 1zja_A 11 VFYQVYPRSFKDTNGDGIGDFKGLTEKLDYLKGLGIDAIWIN 52 (557)
T ss_dssp CEEEECGGGTCCSSSSSSCCHHHHHHTHHHHHHHTCCEEEEC
T ss_pred cEEEEEchHhcCCCCCCccCHHHHHHHHHHHHHcCCCEEEEC
Confidence 478888842 2111112579999999999999999998876
No 246
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=32.04 E-value=75 Score=24.25 Aligned_cols=26 Identities=12% Similarity=-0.033 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHcCCCeeEEecCCC
Q psy629 62 VATLKRKLEQVAQFGCRGFALLFDDI 87 (166)
Q Consensus 62 ~~~L~~K~~ql~~lGvr~FailfDDi 87 (166)
.+.-..=.+.|.+.|.+.++++...-
T Consensus 123 ~~~~~~a~~~L~~~G~~~I~~i~~~~ 148 (293)
T 2iks_A 123 QDDAEMLAEELRKFPAETVLYLGALP 148 (293)
T ss_dssp HHHHHHHHHHHHTSCCSSEEEEEECT
T ss_pred HHHHHHHHHHHHHCCCCEEEEEecCc
Confidence 34444445678889999999986543
No 247
>1gqi_A Alpha-glucuronidase; (alpha-beta)8 barrel, glycoside hydrolase; 1.48A {Pseudomonas cellulosa} SCOP: c.1.8.10 d.92.2.2 PDB: 1gqj_A* 1gqk_A* 1gql_A* 1h41_A*
Probab=31.99 E-value=3e+02 Score=25.62 Aligned_cols=129 Identities=14% Similarity=0.133 Sum_probs=82.1
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEEe---cC----CCCC-CCCCHHHHHHHHHHHHHHHHcCCCeeEEe--cCCCCCCC
Q psy629 22 YSVEEAEHLTGLISAAKEQGIDFYYAL---SP----GLDI-TYSSGKEVATLKRKLEQVAQFGCRGFALL--FDDIESEM 91 (166)
Q Consensus 22 Yp~~~l~~l~~L~~~a~~~~v~Fv~ai---sP----G~~~-~~s~~~d~~~L~~K~~ql~~lGvr~Fail--fDDi~~~~ 91 (166)
-+++-++++++|++..+.-||+...++ || |++- +--+++-.+==++|.++||+.=.+-=|.| .|.= +..
T Consensus 213 lt~~~l~~v~~lAd~fRpYGIkv~LSvnFasP~~lGgL~TaDPld~~V~~WW~~k~~eIY~~IPDfgGflVKAnSE-GqP 291 (708)
T 1gqi_A 213 LSDQFLQKIAALADAFRPYGIKMYLSINFNSPRAFGDVDTADPLDPRVQQWWKTRAQKIYSYIPDFGGFLVKADSE-GQP 291 (708)
T ss_dssp GSHHHHHHHHHHHHHHGGGTCEEEEEECTTHHHHTTSCSCCCTTSHHHHHHHHHHHHHHHHHCTTCCEEEECCSST-TCC
T ss_pred CCcHHHHHHHHHHHHHHhhcCeEEEEecccCccccCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcceEEeccCCC-CCC
Confidence 355669999999999999999999886 56 4431 11134555567899999999855543333 3332 333
Q ss_pred CHHHHHHHhhHHHHHHHHHHHHHHHcCC--CCceEccccccccccCCCC-CChhHHHHHhhccCCCceEE
Q psy629 92 SEADKEVFQSFAHAQVSVTNEVFEHLGQ--PKFMLCPTQYCSTRAVPNV-KNSEYLNTLGSKLAKEIDIM 158 (166)
Q Consensus 92 ~~~d~~~f~~~a~aq~~l~n~v~~~l~~--~~l~~cPt~Y~~~~~~~~~-~~~~Yl~~l~~~L~~~i~i~ 158 (166)
.+. ++++-|+.=+|.+++.|.. .-++.---.|..++ .++. +.-+.++.|.-++.++|-|.
T Consensus 292 GP~------~YgRthAdGANmlA~AL~P~GGiV~WRaFVY~~d~-~DRakaAyd~F~pLDG~F~dNVilQ 354 (708)
T 1gqi_A 292 GPQ------GYGRDHAEGANMLAAALKPFGGVVFWRAFVYHPDI-EDRFRGAYDEFMPLDGKFADNVILQ 354 (708)
T ss_dssp CGG------GGTCCHHHHHHHHHHHHGGGTCEEEEECCCCCTTS-SCGGGHHHHHHGGGTTCSCTTEEEE
T ss_pred CCc------ccCCChhhHHHHHHHHHhhcCCeEEEEEeccCCcc-cchHHHHHHhhhccCCCcCCCeEEE
Confidence 222 3455677778888887754 22333333477766 3332 24556777777777887664
No 248
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=31.76 E-value=52 Score=25.95 Aligned_cols=58 Identities=19% Similarity=0.263 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecCCCCC-----CCC------CHHHHHHHHHHHHHHHH----cCCCeeEEec
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALSPGLDI-----TYS------SGKEVATLKRKLEQVAQ----FGCRGFALLF 84 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~-----~~s------~~~d~~~L~~K~~ql~~----lGvr~Failf 84 (166)
+.++.+++.++.|++.|+..+.. +||... .+. .++.++.+...|..+.+ .||+ ++|=.
T Consensus 108 ~~~~~~~~~i~~A~~lGa~~v~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lEn 180 (340)
T 2zds_A 108 RAAAEIKDTARAAARLGVDTVIG-FTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVR-FAHEV 180 (340)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEE-CCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCE-EEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCEEEE-ecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCE-EEEEc
Confidence 34689999999999999998764 776532 111 13455666666666554 5884 55543
No 249
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=31.69 E-value=1.1e+02 Score=22.11 Aligned_cols=50 Identities=12% Similarity=0.133 Sum_probs=31.8
Q ss_pred HHH-HHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCC-eeEEecC
Q psy629 24 VEE-AEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCR-GFALLFD 85 (166)
Q Consensus 24 ~~~-l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr-~FailfD 85 (166)
..| +..|.++.+.-++.|+.-+++||+. +.+..++. +.+.|+. .|-++.|
T Consensus 60 ~~eh~p~l~~~~~~~~~~g~~~vv~Is~d------~~~~~~~~------~~~~~~~~~fp~l~D 111 (171)
T 2pwj_A 60 SSKHVPPYKHNIDKFKAKGVDSVICVAIN------DPYTVNAW------AEKIQAKDAIEFYGD 111 (171)
T ss_dssp HHHTHHHHHHTHHHHHHTTCSEEEEEESS------CHHHHHHH------HHHTTCTTTSEEEEC
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEeCC------CHHHHHHH------HHHhCCCCceEEEEC
Confidence 345 7778888887788888867788872 22222222 2245664 6777777
No 250
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=31.60 E-value=1.4e+02 Score=23.66 Aligned_cols=54 Identities=13% Similarity=0.141 Sum_probs=29.8
Q ss_pred HHHHHHHCCCeEEEEecC--C-CCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCC
Q psy629 33 LISAAKEQGIDFYYALSP--G-LDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDD 86 (166)
Q Consensus 33 L~~~a~~~~v~Fv~aisP--G-~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDD 86 (166)
.++..++.|+.+|.-=++ + ..+.+-..++.+.-..=.+.|.+.|.|.++++..+
T Consensus 137 ~~~~l~~~~iPvV~i~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~~~ 193 (348)
T 3bil_A 137 QLEDLQKQGMPVVLVDRELPGDSTIPTATSNPQPGIAAAVELLAHNNALPIGYLSGP 193 (348)
T ss_dssp HHHHHHHC-CCEEEESSCCSCC-CCCEEEEECHHHHHHHHHHHHHTTCCSEEEECCC
T ss_pred HHHHHHhCCCCEEEEcccCCCCCCCCEEEeChHHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 344556678888765443 2 22211111223444444567788899999998654
No 251
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=31.26 E-value=1.1e+02 Score=23.99 Aligned_cols=58 Identities=14% Similarity=0.067 Sum_probs=33.6
Q ss_pred HHHHHHHHHHCCCeEEEEecCCCC----------------CCCCCHHHHHHHHHHHHHHHHcC-------CCeeEEecCC
Q psy629 30 LTGLISAAKEQGIDFYYALSPGLD----------------ITYSSGKEVATLKRKLEQVAQFG-------CRGFALLFDD 86 (166)
Q Consensus 30 l~~L~~~a~~~~v~Fv~aisPG~~----------------~~~s~~~d~~~L~~K~~ql~~lG-------vr~FailfDD 86 (166)
..++++.+++.||.+|.-=++-.. +.+-.....+.-..=.+.|.+.| .+.++++-.+
T Consensus 75 ~~~~~~~~~~~giPvV~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~g~~~~~g~~~~i~~i~g~ 154 (350)
T 3h75_A 75 APQILRLSQGSGIKLFIVNSPLTLDQRELIGQSRQNYSDWIGSMVGDDEEAGYRMLKELLHKLGPVPAGHGIELLAFSGL 154 (350)
T ss_dssp HHHHHHHHTTSCCEEEEEESCCCTTTC------------CEEEEECCHHHHHHHHHHHHHHHHCCCCSSCCEEEEEEESC
T ss_pred HHHHHHHHHhCCCcEEEEcCCCChHHHhhhcCCchhccceeeeecCChHHHHHHHHHHHHHHhhhhcCCCCceEEEEeCC
Confidence 345667778889988876554221 11111122344444556777777 5889988655
Q ss_pred C
Q psy629 87 I 87 (166)
Q Consensus 87 i 87 (166)
.
T Consensus 155 ~ 155 (350)
T 3h75_A 155 K 155 (350)
T ss_dssp T
T ss_pred C
Confidence 3
No 252
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=31.16 E-value=1.6e+02 Score=23.69 Aligned_cols=65 Identities=17% Similarity=0.148 Sum_probs=41.1
Q ss_pred CHHHHHHHHHHHH--------HHHHcCCCeeEEecCCCCCCCCHHHHHHHhhHHHHHHHHHHHHHHHcCCCCceEc
Q psy629 58 SGKEVATLKRKLE--------QVAQFGCRGFALLFDDIESEMSEADKEVFQSFAHAQVSVTNEVFEHLGQPKFMLC 125 (166)
Q Consensus 58 ~~~d~~~L~~K~~--------ql~~lGvr~FailfDDi~~~~~~~d~~~f~~~a~aq~~l~n~v~~~l~~~~l~~c 125 (166)
+++.+.+|+.++. ...+.|++.+.+ ||+..+-+++++.+.|.-. ...+++..+.+..+.+-+.||
T Consensus 166 ~Pe~~~~ll~~i~~~~~~~~~~~~~aGad~i~i-~d~~~~~lsp~~f~ef~~p--~~k~i~~~i~~~~g~~~i~~~ 238 (338)
T 2eja_A 166 NPKEYKRLMDILTETVLAYLKEQIKAGADVVQI-FDSWVNNLSLEDYGEYVYP--YVNYLISELKDFSDTPVIYFF 238 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEE-EETTGGGSCHHHHHHHTHH--HHHHHHHHHHHHCCCCEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE-ecCccccCCHHHHHHHhHH--HHHHHHHHHhhcCCCCEEEEc
Confidence 4566667776654 345899997654 6888887888887777433 334566666654233335666
No 253
>3mub_A Alanine racemase; alpha/beta barrel, extended beta-strand domain, pyridoxal PH cofactor, carba lysine, isomerase; HET: LLP KCX; 2.00A {Streptococcus pneumoniae} PDB: 3s46_A*
Probab=30.98 E-value=1.4e+02 Score=24.92 Aligned_cols=53 Identities=19% Similarity=0.369 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHH-CCCeEEEEecCCCC-CCCCCHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 28 EHLTGLISAAKE-QGIDFYYALSPGLD-ITYSSGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 28 ~~l~~L~~~a~~-~~v~Fv~aisPG~~-~~~s~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
+++++|.+.|.+ ..++...-|--|++ +-+...+++..+.+++.+ -|++--||+
T Consensus 109 ~~l~~l~~~a~~~~~~~V~lkvdtGm~R~G~~~~ee~~~~~~~i~~---~~l~l~Gl~ 163 (367)
T 3mub_A 109 EWIQALLDKEVDLTGLTVHLKIDSGMGRIGFREASEVEQAQDLLQQ---HGVCVEGIF 163 (367)
T ss_dssp HHHHHHHHTTCCCTTCEEEEEECSSCCSSSBCSHHHHHHHHHHHHH---TTCEEEEEE
T ss_pred HHHHHHHHHHHhcCCeeEEEEECCCCCcCCCCcHHHHHHHHHHHcc---CCcEEEEEE
Confidence 444555555544 56788888888875 233333678888888776 355544444
No 254
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=30.88 E-value=65 Score=24.47 Aligned_cols=56 Identities=5% Similarity=0.003 Sum_probs=37.6
Q ss_pred hccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 18 WRDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 18 Wre~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
|....+++++ +++.+.++++|+.++ +++|+.+. ..+.+.+-++....+|++...+.
T Consensus 56 ~~~~~~~~~~---~~~~~~l~~~gl~i~-~~~~~~~~------~~~~~~~~i~~A~~lGa~~v~~~ 111 (262)
T 3p6l_A 56 FDFNLDAQTQ---KEIKELAASKGIKIV-GTGVYVAE------KSSDWEKMFKFAKAMDLEFITCE 111 (262)
T ss_dssp ESTTCCHHHH---HHHHHHHHHTTCEEE-EEEEECCS------STTHHHHHHHHHHHTTCSEEEEC
T ss_pred ccccCCHHHH---HHHHHHHHHcCCeEE-EEeccCCc------cHHHHHHHHHHHHHcCCCEEEec
Confidence 5445556554 455566778999854 66665431 23457778888889999998875
No 255
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=30.81 E-value=2.8e+02 Score=24.54 Aligned_cols=83 Identities=14% Similarity=0.134 Sum_probs=54.3
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEec-CCC-----------------------------CCCCCCHHHHHHHHHHHH
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALS-PGL-----------------------------DITYSSGKEVATLKRKLE 70 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~ais-PG~-----------------------------~~~~s~~~d~~~L~~K~~ 70 (166)
.|+. ++++++++.|+++||+.+=-|- ||- .+|-++++-++-|.+=|+
T Consensus 252 ~YT~---~di~eIv~YA~~rgI~VIPEID~PGH~~a~l~~yp~L~~~~~~~~~~~~~~~~~~~l~~~~~~ty~fl~~vl~ 328 (525)
T 3gh5_A 252 YYTQ---EQFKDIVSYAAERYIEVIPEIDMPGHTNAALASYGELNPDGKRKAMRTDTAVGYSTLMPRAEITYQFVEDVIS 328 (525)
T ss_dssp CBCH---HHHHHHHHHHHTTTCEEEEECCCSSSCHHHHHHCGGGSTTSCCCCCCCSCCCSCCCCCTTCHHHHHHHHHHHH
T ss_pred CcCH---HHHHHHHHHHHHcCCEEEEEecccchHHHHHHhChhhccCCCCCcccccCCCCCcccCCCChhHHHHHHHHHH
Confidence 3554 4578999999999999987652 221 234446777777777777
Q ss_pred HHHHcC-CCeeEEecCCCCCCCCHHHHHHHhhHHHHHHHHHHHHHHHc
Q psy629 71 QVAQFG-CRGFALLFDDIESEMSEADKEVFQSFAHAQVSVTNEVFEHL 117 (166)
Q Consensus 71 ql~~lG-vr~FailfDDi~~~~~~~d~~~f~~~a~aq~~l~n~v~~~l 117 (166)
.+.++= -+.|=|-.|.+..... ..+.++++++.+.+
T Consensus 329 Ev~~lFp~~~iHiGgDE~~~~~~-----------~~~~~F~~~v~~~l 365 (525)
T 3gh5_A 329 ELAAISPSPYIHLGGDESNATSA-----------ADYDYFFGRVTAIA 365 (525)
T ss_dssp HHHHHCCSSEEECCCCCCTTSCH-----------HHHHHHHHHHHHHH
T ss_pred HHHHhCCCCEEEEcCcCCCCCCH-----------HHHHHHHHHHHHHH
Confidence 777752 3557777777775421 23556677776655
No 256
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=30.69 E-value=1.1e+02 Score=21.90 Aligned_cols=48 Identities=13% Similarity=0.187 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCC-eeEEecC
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCR-GFALLFD 85 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr-~FailfD 85 (166)
|+..|.++.+.-++.||+=+++||+. +.+..++..+ +.|+. .|-++.|
T Consensus 51 e~p~l~~~~~~~~~~gv~~vv~Is~d------~~~~~~~~~~------~~~~~~~fp~l~D 99 (167)
T 2wfc_A 51 HLPGYVEQAAAIHGKGVDIIACMAVN------DSFVMDAWGK------AHGADDKVQMLAD 99 (167)
T ss_dssp HHHHHHHTHHHHHHTTCCEEEEEESS------CHHHHHHHHH------HTTCTTTSEEEEC
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEeCC------CHHHHHHHHH------hcCCCcceEEEEC
Confidence 78888888888888999557899872 2333333332 34664 4888877
No 257
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=30.63 E-value=1.3e+02 Score=23.77 Aligned_cols=61 Identities=13% Similarity=0.147 Sum_probs=41.6
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEecC-CCCCCCC-CHHHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALSP-GLDITYS-SGKEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisP-G~~~~~s-~~~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
....+.+++++++++.|++.++.|+.-..| |.++.-. +.+.+... -+...++|++.+.+-+
T Consensus 118 ~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a---~~~a~~~GAD~vkt~~ 180 (263)
T 1w8s_A 118 GFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYA---ARIALELGADAMKIKY 180 (263)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHH---HHHHHHHTCSEEEEEC
T ss_pred cCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHH---HHHHHHcCCCEEEEcC
Confidence 334667899999999999999998877667 5554211 22222221 3456679999988886
No 258
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=30.60 E-value=1.6e+02 Score=23.18 Aligned_cols=27 Identities=15% Similarity=0.223 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
+...+.+.++++.+++.|+.+++-.++
T Consensus 145 ~~~~~~~~~~~~~a~~~g~~v~~Dp~~ 171 (319)
T 3lhx_A 145 PTSREKLLSLLRECRAKGGKVIFDNNY 171 (319)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred chhHHHHHHHHHHHHhcCCEEEEeCcC
Confidence 445567889999999999998877654
No 259
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=30.40 E-value=1.3e+02 Score=24.88 Aligned_cols=56 Identities=20% Similarity=0.340 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCC-------CCCCCC------HHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGL-------DITYSS------GKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~-------~~~~s~------~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
-..++++.+.++++|+.++ +++|.. +-++.+ .+.++.+++-++....+|++.+.+.
T Consensus 68 ~~~~~~l~~~l~~~GL~i~-~~~~~~f~~p~~~~g~l~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vvv~ 136 (394)
T 1xla_A 68 EKILGDFNQALKDTGLKVP-MVTTNLFSHPVFKDGGFTSNDRSIRRFALAKVLHNIDLAAEMGAETFVMW 136 (394)
T ss_dssp HHHHHHHHHHHHHHCCBCC-EEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHHHcCCeEE-EEecCccCCccccCCccCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEC
Confidence 3567788888889999865 355522 123433 2346778888999999999988774
No 260
>3igz_B Cofactor-independent phosphoglycerate mutase; glycolysis, cobalt, isomerase; HET: 3PG 2PG; 1.90A {Leishmania mexicana} PDB: 3igy_B* 3nvl_A
Probab=30.07 E-value=1.7e+02 Score=26.46 Aligned_cols=51 Identities=27% Similarity=0.328 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHCCCe--EEEEecCCCCCCCCC-HHHHHHHHHHHHHHHHcCC
Q psy629 27 AEHLTGLISAAKEQGID--FYYALSPGLDITYSS-GKEVATLKRKLEQVAQFGC 77 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~--Fv~aisPG~~~~~s~-~~d~~~L~~K~~ql~~lGv 77 (166)
+++|..|++.|++.||. |+=++.=|-|..-.| .+-++.|.++++.+.++|+
T Consensus 139 ~~Hl~~l~~~a~~~g~~~v~vH~f~DGRD~~p~S~~~~~~~l~~~~~~~~~~g~ 192 (561)
T 3igz_B 139 DNQIYSIIEHAVKDGAKRIRVHALYDGRDVPDGSSFRFTDELEAVLAKVRQNGC 192 (561)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEECSSSSCTTTHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEEccCCCCCcchHHHHHHHHHHHHHHHHhcCC
Confidence 68999999999999994 555666677765544 4567888888888999999
No 261
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=30.00 E-value=78 Score=26.19 Aligned_cols=50 Identities=16% Similarity=0.234 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecCCCC-CCC----CCHHHHHHHHHHHHHHHHc
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALSPGLD-ITY----SSGKEVATLKRKLEQVAQF 75 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~aisPG~~-~~~----s~~~d~~~L~~K~~ql~~l 75 (166)
..++.+++.++.|++.|++.+ .++||.. ..+ +..+.++.+.+.|+.+.+.
T Consensus 113 ~~i~~~~~~i~~A~~LGa~~v-v~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~ 167 (387)
T 1bxb_A 113 YALRKSLETMDLGAELGAEIY-VVWPGREGAEVEATGKARKVWDWVREALNFMAAY 167 (387)
T ss_dssp HHHHHHHHHHHHHHHHTCCEE-EECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEE-EECCCCCCccCCccCCHHHHHHHHHHHHHHHHHH
Confidence 346899999999999999987 5677742 112 1234566777777776654
No 262
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=29.81 E-value=62 Score=27.41 Aligned_cols=63 Identities=17% Similarity=0.234 Sum_probs=47.6
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEe-cCCCC------------------CCC------------------CCHHHHH
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYAL-SPGLD------------------ITY------------------SSGKEVA 63 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~ai-sPG~~------------------~~~------------------s~~~d~~ 63 (166)
.|+++.++.+++|+++.+++|..++.-| |+|-- ..+ =+.+|++
T Consensus 89 i~~d~~i~~~k~l~davH~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~pr~mt~~eI~ 168 (400)
T 4gbu_A 89 VWSEEQMVEWTKIFNAIHEKKSFVWVQLAVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKANNPQHSLTKDEIK 168 (400)
T ss_dssp SSSHHHHHHHHHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESCSSCCSCHHHHHHHHHTTCCCEECCHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHhcCCceEEeeeecCcccCccccccCCCcccCccccccCCCCcccccccCCCCCccCCHHHHH
Confidence 5899999999999999999999999988 34410 000 1357888
Q ss_pred HHHHHHHH----HHHcCCCeeEEe
Q psy629 64 TLKRKLEQ----VAQFGCRGFALL 83 (166)
Q Consensus 64 ~L~~K~~q----l~~lGvr~Fail 83 (166)
.+++.|.+ ..++|.+-.-|-
T Consensus 169 ~ii~~F~~AA~rA~~AGFDgVEIH 192 (400)
T 4gbu_A 169 QYIKEYVQAAKNSIAAGADGVEIH 192 (400)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHHHhcCcCeeeec
Confidence 89888865 456888877664
No 263
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=29.78 E-value=1.3e+02 Score=23.57 Aligned_cols=49 Identities=8% Similarity=-0.006 Sum_probs=34.8
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
+..++-+..++.++.+|++.|+..+. .++ +.+ -..++.++|++.|++--
T Consensus 190 ~~~p~v~~a~~~iv~aa~a~G~~~~v--~~~------d~~-------~~~~~~~~G~~~~s~~~ 238 (256)
T 1dxe_A 190 ASHPDVQKAIQHIFNRASAHGKPSGI--LAP------VEA-------DARRYLEWGATFVAVGS 238 (256)
T ss_dssp TTSHHHHHHHHHHHHHHHHTTCCEEE--ECC------SHH-------HHHHHHHTTCCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHhCCceEE--ecC------CHH-------HHHHHHHcCCCEEEech
Confidence 33456678899999999999998753 221 222 34567799999998654
No 264
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=29.72 E-value=2e+02 Score=22.34 Aligned_cols=56 Identities=14% Similarity=0.074 Sum_probs=31.1
Q ss_pred HHHHHHHHHCCCeEEEEecC--CCC-CCCCCHHHHHHHHHHHHHHHHc--CCCeeEEecCC
Q psy629 31 TGLISAAKEQGIDFYYALSP--GLD-ITYSSGKEVATLKRKLEQVAQF--GCRGFALLFDD 86 (166)
Q Consensus 31 ~~L~~~a~~~~v~Fv~aisP--G~~-~~~s~~~d~~~L~~K~~ql~~l--Gvr~FailfDD 86 (166)
.+.++.+.+.||.+|.-=++ +.. ..+-...+.+.-..=.+.|.+. |.|.++++..+
T Consensus 77 ~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~~~G~~~I~~i~~~ 137 (325)
T 2x7x_A 77 TPIVEEAYQKGIPVILVDRKILSDKYTAYIGADNYEIGRSVGNYIASSLKGKGNIVELTGL 137 (325)
T ss_dssp HHHHHHHHHTTCCEEEESSCCSSSCSSEEEEECHHHHHHHHHHHHHHHTTTEEEEEEEESC
T ss_pred HHHHHHHHHCCCeEEEeCCCCCCcceeEEEecCHHHHHHHHHHHHHHHcCCCceEEEEECC
Confidence 44556677789987765432 211 1111111223333344667775 99999998654
No 265
>1o98_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; isomerase, alpha/beta-type structure; HET: 2PG; 1.4A {Bacillus stearothermophilus} SCOP: c.105.1.1 c.76.1.3 PDB: 1ejj_A* 1eqj_A* 1o99_A* 2ify_A
Probab=29.68 E-value=2e+02 Score=25.57 Aligned_cols=54 Identities=22% Similarity=0.439 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHCCCe--EEEEecCCCCCCCCC-HHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 27 AEHLTGLISAAKEQGID--FYYALSPGLDITYSS-GKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~--Fv~aisPG~~~~~s~-~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
+++|..|++.|++.||+ |+=++.=|-|..-.| ..-++.|.+++.+ +|+-.+|-.
T Consensus 126 ~~hl~~l~~~a~~~g~~~v~~H~~~dGrD~~p~s~~~~~~~~~~~~~~---~~~~~ias~ 182 (511)
T 1o98_A 126 IHHLYALLRLAAKEGVKRVYIHGFLDGRDVGPQTAPQYIKELQEKIKE---YGVGEIATL 182 (511)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEEEECSSSSCTTCHHHHHHHHHHHHHH---HTCCEEEEE
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEEccCCCCCCchHHHHHHHHHHHHHH---hCCEEEEEE
Confidence 58899999999999995 455555577765544 3456677777766 487555543
No 266
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=29.57 E-value=1.5e+02 Score=22.89 Aligned_cols=57 Identities=16% Similarity=0.151 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecC-CCCCCC-CCHHHHHHHHHHH-HHHHHcCCCeeEEec
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSP-GLDITY-SSGKEVATLKRKL-EQVAQFGCRGFALLF 84 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisP-G~~~~~-s~~~d~~~L~~K~-~ql~~lGvr~Failf 84 (166)
++-++.++++++.|++.|+.++.-+.| |.++.- -+..++ ..+ +...++|++.+++.+
T Consensus 128 ~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~----~~~a~~a~~~Gad~i~~~~ 187 (273)
T 2qjg_A 128 WEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELV----AHAARLGAELGADIVKTSY 187 (273)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHH----HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHH----HHHHHHHHHcCCCEEEECC
Confidence 344678999999999999998876655 443310 122222 223 556789999888763
No 267
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=29.51 E-value=1.2e+02 Score=25.19 Aligned_cols=58 Identities=12% Similarity=0.090 Sum_probs=40.2
Q ss_pred ccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 19 RDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 19 re~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
-+++.++-+..++.++++|++.|+..+.+ . ++. ++. .-...+..+|++.+++--|-|.
T Consensus 225 ~~~~~p~v~~ai~~vv~aar~aG~~vgvc--g--e~~-~dp-------~~~~~l~~lG~~~~si~p~~i~ 282 (324)
T 2xz9_A 225 YQPFHPAILRLVKMVIDAAHKEGKFAAMC--G--EMA-GDP-------LAAVILLGLGLDEFSMSATSIP 282 (324)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHTTCEEEEC--S--GGG-GCH-------HHHHHHHHHTCCEEEECGGGHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCceeec--C--ccC-CCH-------HHHHHHHHCCCCEEEEChhHHH
Confidence 34556788899999999999999986332 1 111 122 2236778999999987766654
No 268
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=29.09 E-value=1.9e+02 Score=21.88 Aligned_cols=54 Identities=17% Similarity=0.177 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCCCCCCCC-----HHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGLDITYSS-----GKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~-----~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
.++++.+.++++|+.-+ ++|....+++.+ ++.++.+.+-++....+|++...+.
T Consensus 50 ~~~~~~~~~~~~gl~~~-~~h~~~~~~l~s~~~~r~~~~~~~~~~i~~a~~lGa~~vv~h 108 (270)
T 3aam_A 50 EVEAFRALREASGGLPA-VIHASYLVNLGAEGELWEKSVASLADDLEKAALLGVEYVVVH 108 (270)
T ss_dssp HHHHHHHHHHHTTCCCE-EEECCTTCCTTCSSTHHHHHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHcCCceE-EEecCcccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEC
Confidence 44556666778898323 333333344432 2457788888888999999988764
No 269
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=29.05 E-value=1.2e+02 Score=24.62 Aligned_cols=28 Identities=18% Similarity=0.222 Sum_probs=23.7
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCe-EEEEe
Q psy629 21 LYSVEEAEHLTGLISAAKEQGID-FYYAL 48 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~-Fv~ai 48 (166)
.|+++|++.+++=++.+++.|++ ||++.
T Consensus 66 ~Ys~~E~~~M~~Di~~~~~~GadGvV~G~ 94 (256)
T 1twd_A 66 CYSDGEFAAILEDVRTVRELGFPGLVTGV 94 (256)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSEEEECC
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCEEEEee
Confidence 39999999999999999999985 55554
No 270
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=28.77 E-value=39 Score=29.60 Aligned_cols=40 Identities=15% Similarity=0.242 Sum_probs=29.6
Q ss_pred EEEEecCC--CCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 44 FYYALSPG--LDITYSSGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 44 Fv~aisPG--~~~~~s~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
.+|-|+|. .+-+-+...+++.|.+||+.|.+|||+..-|.
T Consensus 10 viYqi~~~~F~d~~~dg~Gd~~gi~~~ldyl~~lGv~~i~l~ 51 (555)
T 2ze0_A 10 VAYQIYPRSFMDANGDGIGDLRGIIEKLDYLVELGVDIVWIC 51 (555)
T ss_dssp CEEEECGGGTCCSSSSSSCCHHHHHHTHHHHHHHTCCEEEEC
T ss_pred cEEEEEchHhcCCCCCCcCCHHHHHHHHHHHHHcCCCEEEeC
Confidence 57888983 22111113579999999999999999998874
No 271
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=28.71 E-value=1.6e+02 Score=24.31 Aligned_cols=56 Identities=18% Similarity=0.203 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
..+.++.+++..++.+++|++ +.|--+......+.+.+.+.++++.+.|+..+.|.
T Consensus 77 ~~~~l~~~~~~~~~~~~d~vi--~~GDl~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~ 132 (443)
T 2xmo_A 77 SDEITDAFLADVESKKTDVLI--ISGDLTNNGEKTSHEELAKKLTQVEKNGTQVFVVP 132 (443)
T ss_dssp HHHHHHHHHHHHHHHTCSEEE--EESCCBSSCCHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCEEE--ECCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEC
Confidence 456778888888888999865 46765555555667788888888888898888774
No 272
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=28.70 E-value=1.5e+02 Score=22.19 Aligned_cols=48 Identities=13% Similarity=0.158 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCC-eeEEecC
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCR-GFALLFD 85 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr-~FailfD 85 (166)
|+..|+++.+.-++.|++=+++||+. +....++..+ +.|+. .|-+|-|
T Consensus 67 El~~f~~~~~ef~~~g~d~VigIS~D------~~~~~~~f~~------~~~l~~~f~lLsD 115 (176)
T 4f82_A 67 HVPGYVEHAEQLRAAGIDEIWCVSVN------DAFVMGAWGR------DLHTAGKVRMMAD 115 (176)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEESS------CHHHHHHHHH------HTTCTTTSEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCC------CHHHHHHHHH------HhCCCCCceEEEc
Confidence 78888888888888999778899982 2233333332 23554 5777776
No 273
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=28.67 E-value=21 Score=20.11 Aligned_cols=16 Identities=31% Similarity=0.341 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHCCCeE
Q psy629 29 HLTGLISAAKEQGIDF 44 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~F 44 (166)
+|+.|-++|++.+|+.
T Consensus 16 elkklkeeakkanirv 31 (36)
T 2ki0_A 16 ELKKLKEEAKKANIRV 31 (36)
T ss_dssp HHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHhccEEE
Confidence 3455555666666654
No 274
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=28.64 E-value=1.7e+02 Score=21.67 Aligned_cols=56 Identities=16% Similarity=0.020 Sum_probs=33.4
Q ss_pred HHHHHHHHHCCCeEEEEecC--CCCC-CCCCHHHHHHHHHHHHHHHHc----CCCeeEEecCC
Q psy629 31 TGLISAAKEQGIDFYYALSP--GLDI-TYSSGKEVATLKRKLEQVAQF----GCRGFALLFDD 86 (166)
Q Consensus 31 ~~L~~~a~~~~v~Fv~aisP--G~~~-~~s~~~d~~~L~~K~~ql~~l----Gvr~FailfDD 86 (166)
.+.++.+++.|+.+|.-=++ +... ++-.....+.-..=.+.|.+. |.+.++++-.+
T Consensus 74 ~~~~~~~~~~~ipvV~~~~~~~~~~~~~~V~~d~~~~g~~~~~~l~~~~~~~G~~~i~~i~~~ 136 (276)
T 3ksm_A 74 TPSVAQYRARNIPVLVVDSDLAGDAHQGLVATDNYAAGQLAARALLATLDLSKERNIALLRLR 136 (276)
T ss_dssp HHHHHHHHHTTCCEEEESSCCSSSCSSEEEECCHHHHHHHHHHHHHHHSCTTSCEEEEECBCC
T ss_pred HHHHHHHHHCCCcEEEEecCCCCCCcceEEccCHHHHHHHHHHHHHHhcCcCCCceEEEEEcC
Confidence 34556667778888765443 2221 111112334555556778888 99999998654
No 275
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=27.99 E-value=1.1e+02 Score=23.23 Aligned_cols=26 Identities=19% Similarity=0.172 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
..|+..|.+|.++-++.||. +++||.
T Consensus 48 ~~el~~l~~l~~~f~~~~v~-vi~IS~ 73 (224)
T 1prx_A 48 TTELGRAAKLAPEFAKRNVK-LIALSI 73 (224)
T ss_dssp HHHHHHHHHHHHHHHTTTEE-EEEEES
T ss_pred HHHHHHHHHHHHHHHHCCCE-EEEEcC
Confidence 46788899999988889998 578886
No 276
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=27.96 E-value=1.2e+02 Score=25.38 Aligned_cols=63 Identities=16% Similarity=0.225 Sum_probs=43.9
Q ss_pred CHHH-HHHHHHHHHHHHHCC--CeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCCCHH
Q psy629 23 SVEE-AEHLTGLISAAKEQG--IDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESEMSEA 94 (166)
Q Consensus 23 p~~~-l~~l~~L~~~a~~~~--v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~~~~ 94 (166)
+.+| ++.+.+.++.+++.| +...+.+. +.. ..+.+.+.+-++.+.++ ++.+. +=|.-|...+.
T Consensus 108 s~~e~l~~~~~~v~~ak~~g~~~~v~~~~e---d~~---~~~~~~~~~~~~~~~~~-a~~i~--l~DT~G~~~P~ 173 (382)
T 2ztj_A 108 DIPRIIEEAKEVIAYIREAAPHVEVRFSAE---DTF---RSEEQDLLAVYEAVAPY-VDRVG--LADTVGVATPR 173 (382)
T ss_dssp CHHHHHHHHHHHHHHHHHHCTTSEEEEEET---TTT---TSCHHHHHHHHHHHGGG-CSEEE--EEETTSCCCHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEEEEEE---eCC---CCCHHHHHHHHHHHHHh-cCEEE--ecCCCCCCCHH
Confidence 4455 799999999999999 88777665 211 23456777788888888 88766 44555554443
No 277
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=27.93 E-value=2.1e+02 Score=22.10 Aligned_cols=57 Identities=14% Similarity=0.114 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHH--CCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHH-cCCCeeEEe
Q psy629 25 EEAEHLTGLISAAKE--QGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQ-FGCRGFALL 83 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~--~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~-lGvr~Fail 83 (166)
+..+.|+++++..++ .+++|++- -|--+.....++++.+.+-++.+.+ +|+..+.|.
T Consensus 48 ~~~~~l~~~l~~i~~~~~~~d~vi~--~GDl~~~~~~~~~~~~~~~l~~l~~~~~~pv~~v~ 107 (330)
T 3ib7_A 48 DADDRLGELLEQLNQSGLRPDAIVF--TGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVM 107 (330)
T ss_dssp CHHHHHHHHHHHHHHHTCCCSEEEE--CSCCBTTCCHHHHHHHHHHHHHHHHHHTCEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEEE--CCCCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEeC
Confidence 346778888888888 78998754 5765555556777788888877743 577766543
No 278
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=27.89 E-value=1.2e+02 Score=24.47 Aligned_cols=51 Identities=12% Similarity=0.034 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
.++..+.++.+++.|+.+..++-.|+. .+.+++.. -++.+.++|++..++.
T Consensus 187 ~~~~l~~i~~a~~~Gi~v~~~~i~Glg---et~e~~~~---~l~~l~~l~~~~v~~~ 237 (350)
T 3t7v_A 187 FDGRVNARRFAKQQGYCVEDGILTGVG---NDIESTIL---SLRGMSTNDPDMVRVM 237 (350)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEEESSS---CCHHHHHH---HHHHHHHTCCSEEEEE
T ss_pred HHHHHHHHHHHHHcCCeEccceEeecC---CCHHHHHH---HHHHHHhCCCCEEEec
Confidence 455666788888999998888888882 34455544 4556677899876654
No 279
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=27.82 E-value=2.3e+02 Score=22.48 Aligned_cols=26 Identities=12% Similarity=0.119 Sum_probs=20.7
Q ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEe
Q psy629 23 SVEEAEHLTGLISAAKEQGIDFYYAL 48 (166)
Q Consensus 23 p~~~l~~l~~L~~~a~~~~v~Fv~ai 48 (166)
++...+.+.++++.+++.|+.+++-.
T Consensus 160 ~~~~~~~~~~~~~~a~~~g~~v~~Dp 185 (328)
T 4e69_A 160 DQCGRATLLRALAQARATGRTIAFDP 185 (328)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CchHHHHHHHHHHHHHhCCCEEEEeC
Confidence 35556778899999999999887765
No 280
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=27.81 E-value=1.7e+02 Score=23.66 Aligned_cols=65 Identities=22% Similarity=0.248 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHH--------HHHHHcCCCeeEEecCCCCCCCCHHHHHHHhhHHHHHHHHHHHHHHHc-CCCCceEc
Q psy629 58 SGKEVATLKRKL--------EQVAQFGCRGFALLFDDIESEMSEADKEVFQSFAHAQVSVTNEVFEHL-GQPKFMLC 125 (166)
Q Consensus 58 ~~~d~~~L~~K~--------~ql~~lGvr~FailfDDi~~~~~~~d~~~f~~~a~aq~~l~n~v~~~l-~~~~l~~c 125 (166)
+++.+.+|+.++ +.+.+.|++.+.+ ||+..+-+++++.+.|.-. ...+++..+.+.. +.+-+.||
T Consensus 180 ~Pe~~~~ll~~l~~~~~~~~~~~~~aGad~iqi-~D~~~~~lsp~~f~ef~~p--~~~~i~~~i~~~~~~~~~ih~c 253 (353)
T 1j93_A 180 EPKVLHALLQKFATSMAKYIRYQADSGAQAVQI-FDSWATELSPVDFEEFSLP--YLKQIVDSVKLTHPNLPLILYA 253 (353)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEE-ECGGGGGSCHHHHHHHTHH--HHHHHHHHHHHHSTTCCEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE-eCcccccCCHHHHHHHhHH--HHHHHHHHHHHhCCCCCEEEEC
Confidence 345566666665 4455899997654 5777777777776666322 2334555555443 33335666
No 281
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=27.72 E-value=2.5e+02 Score=22.86 Aligned_cols=42 Identities=21% Similarity=0.323 Sum_probs=28.1
Q ss_pred CCHHHHHHHHHHHH--------HHHHcCCCeeEEecCCCCCCCCHHHHHHH
Q psy629 57 SSGKEVATLKRKLE--------QVAQFGCRGFALLFDDIESEMSEADKEVF 99 (166)
Q Consensus 57 s~~~d~~~L~~K~~--------ql~~lGvr~FailfDDi~~~~~~~d~~~f 99 (166)
.+++.+.+|+.++. .+.+.|++.+.| ||+..+-+++++.+.|
T Consensus 179 ~~Pe~~~~ll~~i~~~~~~~~~~~~~aGad~i~i-~D~~~~~lsp~~f~ef 228 (359)
T 2inf_A 179 SMPDAWNLLMSKLADMIIVYVKAQIKAGAKAIQI-FDSWVGALNQADYRTY 228 (359)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEE-ECTTGGGSCHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE-eCCccccCCHHHHHHH
Confidence 34555666666654 455899997664 6777777777776665
No 282
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=27.64 E-value=47 Score=31.46 Aligned_cols=65 Identities=14% Similarity=0.165 Sum_probs=46.9
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEEecCC----------------------------------CCCCCCCHHHHHHHHH
Q psy629 22 YSVEEAEHLTGLISAAKEQGIDFYYALSPG----------------------------------LDITYSSGKEVATLKR 67 (166)
Q Consensus 22 Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG----------------------------------~~~~~s~~~d~~~L~~ 67 (166)
++...+++|++||++|+++||+.+.=+-|. .++++.+++-.+.|+.
T Consensus 526 ~Gt~~~~dfk~LV~~aH~~GI~VILDvV~NHt~~~~~~~f~~~~p~y~~~~~~~g~~~~~~g~~~dln~~~p~Vr~~i~d 605 (921)
T 2wan_A 526 EGTARITELKQLIQSLHQQRIGVNMDVVYNHTFDVMVSDFDKIVPQYYYRTDSNGNYTNGSGCGNEFATEHPMAQKFVLD 605 (921)
T ss_dssp STTHHHHHHHHHHHHHHHTTCEEEEEECTTCCSCSSSSHHHHHSTTTTBCBCTTSCBCCTTSSSCCBCTTSHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHcCCEEEEEEccccccccccccccCCCCCeEEEcCCCCcccCCCCcccccccCCHHHHHHHHH
Confidence 455568999999999999999998876431 1244445566677777
Q ss_pred HHHHHH-HcCCCeeEEecCCCC
Q psy629 68 KLEQVA-QFGCRGFALLFDDIE 88 (166)
Q Consensus 68 K~~ql~-~lGvr~FailfDDi~ 88 (166)
=+.... +.||+-|= ||-+.
T Consensus 606 ~l~~Wl~e~gVDGfR--~Da~~ 625 (921)
T 2wan_A 606 SVNYWVNEYHVDGFR--FDLMA 625 (921)
T ss_dssp HHHHHHHHHCCCEEE--ETTGG
T ss_pred HHHHHHHHcCCCEEE--ecccc
Confidence 777666 58999887 66664
No 283
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=27.52 E-value=53 Score=27.28 Aligned_cols=24 Identities=8% Similarity=0.094 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHC------CCeEEEEecCC
Q psy629 28 EHLTGLISAAKEQ------GIDFYYALSPG 51 (166)
Q Consensus 28 ~~l~~L~~~a~~~------~v~Fv~aisPG 51 (166)
+..++.++.|++. +|.+.+||||-
T Consensus 77 ~~~~~~~~La~~~~~~~~~~v~~~~GiHP~ 106 (325)
T 3ipw_A 77 NDFKKAIEIINKYQNLTNIKLVTTIGVHPT 106 (325)
T ss_dssp HHHHHHHHHHHHHGGGCSSEEEEEECCCGG
T ss_pred HHHHHHHHHHHHCCCcccceEEEEEEECcc
Confidence 3444455555544 47888999993
No 284
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=27.26 E-value=2.1e+02 Score=21.90 Aligned_cols=56 Identities=13% Similarity=-0.000 Sum_probs=31.3
Q ss_pred HHHHHHHHCCCeEEEEecC--CC-CCCCCCHHHHHHHHHHHHHHHHc--CCCeeEEecCCC
Q psy629 32 GLISAAKEQGIDFYYALSP--GL-DITYSSGKEVATLKRKLEQVAQF--GCRGFALLFDDI 87 (166)
Q Consensus 32 ~L~~~a~~~~v~Fv~aisP--G~-~~~~s~~~d~~~L~~K~~ql~~l--Gvr~FailfDDi 87 (166)
+.++.+++.||.+|.-=++ +. .+.+-...+.+.-..=.+.|.+. |.+.++++..+-
T Consensus 73 ~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~d~~~~g~~a~~~L~~~~~G~~~I~~i~~~~ 133 (313)
T 2h3h_A 73 PTIKKALEMGIPVVTLDTDSPDSGRYVYIGTDNYQAGYTAGLIMKELLGGKGKVVIGTGSL 133 (313)
T ss_dssp HHHHHHHHTTCCEEEESSCCTTSCCSCEEECCHHHHHHHHHHHHHHHHTSCSEEEEEESCS
T ss_pred HHHHHHHHCCCeEEEeCCCCCCcceeEEECcCHHHHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 4455667788888765432 21 12111111223333344667777 999999987653
No 285
>1q1q_A SULT2B1A, sulfotransferase family, cytosolic, 2B, member 1 isoform A; pregnenolone, PAP; HET: A3P NHE; 2.91A {Homo sapiens} SCOP: c.37.1.5
Probab=27.19 E-value=15 Score=30.65 Aligned_cols=37 Identities=16% Similarity=0.376 Sum_probs=27.6
Q ss_pred hhhccCCCHHHHHHHHHHHHHH-HHCCCeEEEEecCCCC
Q psy629 16 AYWRDLYSVEEAEHLTGLISAA-KEQGIDFYYALSPGLD 53 (166)
Q Consensus 16 ~~Wre~Yp~~~l~~l~~L~~~a-~~~~v~Fv~aisPG~~ 53 (166)
..||..++.++.+.|.+..+.- +..|. |.|.+|++.+
T Consensus 264 GdWk~~ls~e~~~~~~~~~~e~l~~~Gy-f~~~~~~~~~ 301 (350)
T 1q1q_A 264 GDWKNHFTVAQSEAFDRAYRKQMRGMPT-FPWDEDPEED 301 (350)
T ss_dssp TGGGGTCCHHHHHHHHHHHHTTSTTCCC-CTTCC-----
T ss_pred CCccccCCHHHHHHHHHHHHHHhcCCCC-ccccCchhhc
Confidence 5799999999999999987665 67788 9888886554
No 286
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=27.04 E-value=1.7e+02 Score=23.76 Aligned_cols=89 Identities=11% Similarity=-0.009 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCC------------CCCCCCHHHHHHHHHHHH--------HHHHcCCCeeEEecCC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGL------------DITYSSGKEVATLKRKLE--------QVAQFGCRGFALLFDD 86 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~------------~~~~s~~~d~~~L~~K~~--------ql~~lGvr~FailfDD 86 (166)
++.++.+.++.....--++++-+|.- ...+.+++.+.+|+.|+. ...+.|+..+.| ||+
T Consensus 134 ~eai~~l~~~l~~~~pligf~g~P~Tla~~l~~~~~~~~~~~~~pe~~~~ll~~i~~~~~~~~~~qi~aGad~i~i-~D~ 212 (348)
T 4ay7_A 134 LEAIKIIREKVGPDVPIVGGMEGPVTVASDLVSVKSFMKWSIKKTDLLEQALDIATEASIIYANAMVEAGADVIAI-ADP 212 (348)
T ss_dssp HHHHHHHHHHHCTTSCEEEEEECHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEE-ECG
T ss_pred HHHHHHHHHHhCCCeeEEEeccchHHHHHhcccchHHHHHHHHChHhHHHHHHHHHHHHHHHHHHHHhcCCCccee-ecc
Confidence 34455554444444445677788831 112334566777776654 456889998876 688
Q ss_pred CCCC--CCHHHHHHHhhHHHHHHHHHHHHHHHcCCCCc
Q psy629 87 IESE--MSEADKEVFQSFAHAQVSVTNEVFEHLGQPKF 122 (166)
Q Consensus 87 i~~~--~~~~d~~~f~~~a~aq~~l~n~v~~~l~~~~l 122 (166)
..+. +++++.+.|.- -.+.+|.+.++..++
T Consensus 213 ~a~~~~lsp~~f~~f~~------p~~k~i~~~~~~~~i 244 (348)
T 4ay7_A 213 VASPDLMSPDSFRQFLK------SRLQKFASSVNSVTV 244 (348)
T ss_dssp GGSTTTSCHHHHHHHHH------HHHHHHHHHSSSEEE
T ss_pred ccccccCCHHHHHHHhh------HHHHHHHhhccCCcE
Confidence 7753 67777776632 224556666666553
No 287
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=27.01 E-value=1.1e+02 Score=24.25 Aligned_cols=29 Identities=24% Similarity=0.470 Sum_probs=25.4
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEec
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALS 49 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~ais 49 (166)
.|++++-.+|.++++..++.|+.|+++-+
T Consensus 184 ~f~~~d~~~L~~~l~~l~~~g~~~~lS~~ 212 (259)
T 1yf3_A 184 FWSEDEEKDLLNLLDSLNDRGIKFGLSNV 212 (259)
T ss_dssp GCCHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhhCCCEEEEEee
Confidence 38899999999999999888999988876
No 288
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=27.00 E-value=2.1e+02 Score=21.77 Aligned_cols=59 Identities=14% Similarity=0.110 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecC-----CCC-CCCC------CHHHHHHHHHHHHHHHH----cCCCeeEEec
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALSP-----GLD-ITYS------SGKEVATLKRKLEQVAQ----FGCRGFALLF 84 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~aisP-----G~~-~~~s------~~~d~~~L~~K~~ql~~----lGvr~Failf 84 (166)
+.++.+++.++.|++.|+..+...++ |.. -.++ .++.++.+.+.|..+.+ .||+ ++|=.
T Consensus 87 ~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~lE~ 161 (301)
T 3cny_A 87 KASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLK-VAYHH 161 (301)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCE-EEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCE-EEEec
Confidence 45788999999999999998765432 431 1112 45666666666665544 5885 55543
No 289
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=26.95 E-value=43 Score=29.27 Aligned_cols=40 Identities=18% Similarity=0.245 Sum_probs=29.6
Q ss_pred EEEEecCCC--CCCCCCHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 44 FYYALSPGL--DITYSSGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 44 Fv~aisPG~--~~~~s~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
.+|-|+|.. +-+-+...+++.|.+||+-|.+|||+..-|.
T Consensus 10 viYqi~~~~F~~~~~dg~Gdl~gi~~~Ldyl~~LGv~~I~l~ 51 (543)
T 2zic_A 10 TVYQIYPKSFMDTNGDGIGDLKGITSKLDYLQKLGVMAIWLS 51 (543)
T ss_dssp CEEEECGGGTCCSSSSSSCCHHHHHHTHHHHHHHTCSEEEEC
T ss_pred eEEEEEcHHhcCCCCCCccCHHHHHHHHHHHHHcCCCEEEEC
Confidence 478888832 2111123579999999999999999998876
No 290
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=26.80 E-value=1.5e+02 Score=22.22 Aligned_cols=26 Identities=19% Similarity=0.192 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.|+..|.++.+.-++.|++=+++||.
T Consensus 52 ~e~~~l~~~~~~~~~~~~~~vv~is~ 77 (241)
T 1nm3_A 52 SHLPRYNELAPVFKKYGVDDILVVSV 77 (241)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEEc
Confidence 67888888888888889855678886
No 291
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=26.75 E-value=1.3e+02 Score=24.73 Aligned_cols=55 Identities=22% Similarity=0.332 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHCCCe---EEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeE
Q psy629 24 VEEAEHLTGLISAAKEQGID---FYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFA 81 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~---Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Fa 81 (166)
++-++.|++.++.|.+.||+ .++= ||..+ -.+.++--.+++.+..+.++|+--+.
T Consensus 178 ~ev~~~l~~~i~~a~~~GI~~~~IilD--Pg~Gf-gk~~~~n~~ll~~l~~l~~lg~Pvl~ 235 (297)
T 1tx2_A 178 ADMIADLYDSIKIAKDAGVRDENIILD--PGIGF-AKTPEQNLEAMRNLEQLNVLGYPVLL 235 (297)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEE--CCTTS-SCCHHHHHHHHHTGGGGGGGCSCBEE
T ss_pred HHHHHHHHHHHHHHHHcCCChhcEEEe--CCCCc-CCCHHHHHHHHHHHHHHHhCCCCEEE
No 292
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=26.75 E-value=2.1e+02 Score=21.68 Aligned_cols=56 Identities=11% Similarity=0.073 Sum_probs=38.4
Q ss_pred HHHHHHHHHHCCCeEEEEecCCCCCC-----CC-C----HHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 30 LTGLISAAKEQGIDFYYALSPGLDIT-----YS-S----GKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 30 l~~L~~~a~~~~v~Fv~aisPG~~~~-----~s-~----~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
++++.+..++.|+.++..-.|..++. ++ . ++.++.+.+-++....+|++...+..-
T Consensus 50 ~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g 115 (269)
T 3ngf_A 50 ADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALALDCRTLHAMSG 115 (269)
T ss_dssp HHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHTTCCEEECCBC
T ss_pred HHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHHcCCCEEEEccC
Confidence 67888888999999864333532221 11 1 345677888888899999999887543
No 293
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=26.68 E-value=1e+02 Score=24.92 Aligned_cols=19 Identities=16% Similarity=-0.087 Sum_probs=9.9
Q ss_pred HHHHHHHHCC--CeEEEEecC
Q psy629 32 GLISAAKEQG--IDFYYALSP 50 (166)
Q Consensus 32 ~L~~~a~~~~--v~Fv~aisP 50 (166)
.+.+.+++.+ |-...|+||
T Consensus 78 ~~~~la~~~~~~i~~~~G~hp 98 (330)
T 2ob3_A 78 LLAEVSRAADVHIVAATGLWF 98 (330)
T ss_dssp HHHHHHHHHTCEEECEEECCS
T ss_pred HHHHHHHHhCCcEEEEecCCc
Confidence 3344444554 334567776
No 294
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=26.65 E-value=45 Score=29.37 Aligned_cols=40 Identities=15% Similarity=0.295 Sum_probs=30.1
Q ss_pred EEEEecCCC--CCCCCCHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 44 FYYALSPGL--DITYSSGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 44 Fv~aisPG~--~~~~s~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
.+|-|+|.. +-+-+..-+++.|++||+-|.+|||+..-|.
T Consensus 24 viYqi~~~~F~d~~~dg~Gdl~gi~~~LdyL~~LGv~~I~l~ 65 (570)
T 1m53_A 24 VFYQIYPRSFKDTNDDGIGDIRGIIEKLDYLKSLGIDAIWIN 65 (570)
T ss_dssp CEEEECGGGTCCSSSSSSCCHHHHHHTHHHHHHHTCCEEEEC
T ss_pred cEEEEechhhccCCCCCccCHHHHHHHHHHHHHcCCCEEEEC
Confidence 588899932 2111113579999999999999999998876
No 295
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=26.61 E-value=2e+02 Score=23.63 Aligned_cols=57 Identities=19% Similarity=0.297 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCC-------CCCCCC------HHHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGL-------DITYSS------GKEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~-------~~~~s~------~~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
-+.++++.+.++++|+.+. +++|+. +.++++ .+.++.+++=++...++|++.+.+..
T Consensus 68 ~~~~~~l~~~l~~~GL~i~-~~~~~~f~~p~~~~g~l~spd~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~ 137 (393)
T 1xim_A 68 DGIIAGFKKALDETGLIVP-MVTTNLFTHPVFKDGGFTSNDRSVRRYAIRKVLRQMDLGAELGAKTLVLWG 137 (393)
T ss_dssp HHHHHHHHHHHHHHTCBCC-EEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHHHHHhCCEEE-EEecCCcCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECC
Confidence 3567788888999999974 334422 224443 23457788888888899999987653
No 296
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=26.61 E-value=56 Score=29.48 Aligned_cols=23 Identities=17% Similarity=0.293 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHCCCeEEEEec
Q psy629 27 AEHLTGLISAAKEQGIDFYYALS 49 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~ais 49 (166)
+++|++|+++|+++||+.+.=+-
T Consensus 107 ~~df~~Lv~~aH~~GikVilD~V 129 (686)
T 1qho_A 107 WTTFDTLVNDAHQNGIKVIVDFV 129 (686)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 78999999999999999887553
No 297
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=26.54 E-value=2.7e+02 Score=22.90 Aligned_cols=98 Identities=10% Similarity=0.099 Sum_probs=63.2
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCC-CHHHHHHHhhHHHHHHHHHHHHHHHcCCC
Q psy629 42 IDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESEM-SEADKEVFQSFAHAQVSVTNEVFEHLGQP 120 (166)
Q Consensus 42 v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~-~~~d~~~f~~~a~aq~~l~n~v~~~l~~~ 120 (166)
..+++-..|. .-.+....+=++.+...|++..+|...-+.... .+.+-.-+......|...+++|.+..+..
T Consensus 232 t~~vlVt~pe-------~~~~~ea~r~~~~L~~~gi~v~gvVvN~~~~~~~~~~~~~~~~~r~~~q~~~l~~i~~~~~~~ 304 (348)
T 3io3_A 232 TTFICVCISE-------FLSLYETERMIQELMSYNMDVNSIVVNQLLFAEGDDHSCKRCESRWKMQKKYLDQMGELYEDY 304 (348)
T ss_dssp EEEEEEEESS-------HHHHHHHHHHHHHHHHTTCCCCEEEEEEECCCC-----CHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred eEEEEEecCC-------ccHHHHHHHHHHHHHHCCCCccEEEEcCCccccccCccCHHHHHHHHHHHHHHHHHHHHccCC
Confidence 4677778883 334556666677778899999999876655321 00000123344566889999999998777
Q ss_pred CceEccccccccccCCCCCChhHHHHHhhccC
Q psy629 121 KFMLCPTQYCSTRAVPNVKNSEYLNTLGSKLA 152 (166)
Q Consensus 121 ~l~~cPt~Y~~~~~~~~~~~~~Yl~~l~~~L~ 152 (166)
++..+|-.-. ++.+-+=|+.|++.|-
T Consensus 305 ~~~~~pl~~~------e~~G~~~L~~~~~~l~ 330 (348)
T 3io3_A 305 HLVKMPLLGC------EIRGVENLKKFSKFLL 330 (348)
T ss_dssp EEEEEECCSS------CCCSHHHHHHHHHHHH
T ss_pred CEEEecCCCC------CCCCHHHHHHHHHHHc
Confidence 7777776432 2345667888877653
No 298
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=26.48 E-value=2.2e+02 Score=21.95 Aligned_cols=53 Identities=6% Similarity=0.049 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCCCCCCCC---HHHHHHHHHHHHHHHHcCCCeeEE
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGLDITYSS---GKEVATLKRKLEQVAQFGCRGFAL 82 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~---~~d~~~L~~K~~ql~~lGvr~Fai 82 (166)
.++++.+.+++.|+.... ++|..++.-.+ .+.++.+.+-++....+|++..-+
T Consensus 69 ~~~~~~~~l~~~gl~i~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~ 124 (296)
T 2g0w_A 69 TDEDMLRILDEHNMKVTE-VEYITQWGTAEDRTAEQQKKEQTTFHMARLFGVKHINC 124 (296)
T ss_dssp CHHHHHHHHHHTTCEEEE-EECBCCCSSTTTCCHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred cHHHHHHHHHHcCCceEe-ehhhhccccCChHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 456777888999999654 56643331111 224677888888889999998865
No 299
>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens}
Probab=26.42 E-value=72 Score=26.29 Aligned_cols=50 Identities=18% Similarity=0.263 Sum_probs=36.8
Q ss_pred HHHHHHHHHHCCCeEEEEecCCCC--------------CCCCCHHHHHHHHHHHHHHHHcCCCe
Q psy629 30 LTGLISAAKEQGIDFYYALSPGLD--------------ITYSSGKEVATLKRKLEQVAQFGCRG 79 (166)
Q Consensus 30 l~~L~~~a~~~~v~Fv~aisPG~~--------------~~~s~~~d~~~L~~K~~ql~~lGvr~ 79 (166)
|.+-++...+.|++..+-|.||.. +..++.++++.+++.+..++.+|+.-
T Consensus 255 f~~~v~~l~~~g~~~fvEiGP~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~ 318 (336)
T 3ptw_A 255 FINDIEKMIESGVDTFIEIGPGKALSGFVKKINKNVTVLNVEDLKSLEKTLSKLREMEVLAENL 318 (336)
T ss_dssp HHHHHHHHHHTTCCEEEEESSCSHHHHHHHHHCSSSEEEEESSHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHhCCCCEEEEeCCcHHHHHHHHHHcCCCCeEecCCHHHHHHHHHHHHHHHHhhccC
Confidence 445556666779999999999731 23345788888999999999888763
No 300
>1yzm_A FYVE-finger-containing RAB5 effector protein rabenosyn-5; RAB GTPase, vesicular trafficking, protein transport; 1.50A {Homo sapiens} SCOP: a.2.19.1
Probab=26.41 E-value=1.2e+02 Score=18.73 Aligned_cols=33 Identities=33% Similarity=0.525 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHH
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVA 73 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~ 73 (166)
+++..++.+++.|++.+ +| ++++.|.+-+..|.
T Consensus 9 EQ~~~I~~~I~qAk~~~-------------r~---DEV~~Le~NLrEL~ 41 (51)
T 1yzm_A 9 QQIHNITSFIRQAKAAG-------------RM---DEVRTLQENLRQLQ 41 (51)
T ss_dssp HHHHHHHHHHHHHHHTT-------------CH---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-------------Cc---HHHHHHHHHHHHHH
Confidence 77889999999999887 33 56777777776664
No 301
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=26.35 E-value=32 Score=29.43 Aligned_cols=40 Identities=23% Similarity=0.333 Sum_probs=29.8
Q ss_pred EEEEecCCC--CCCCCCHHHHHHHHHHHHHH--------HHcCCCeeEEe
Q psy629 44 FYYALSPGL--DITYSSGKEVATLKRKLEQV--------AQFGCRGFALL 83 (166)
Q Consensus 44 Fv~aisPG~--~~~~s~~~d~~~L~~K~~ql--------~~lGvr~Fail 83 (166)
.+|-|+|.- +-+-+..-+++.+++||+.| .+|||+..-|.
T Consensus 6 viYqi~~~~F~~~~~~g~Gdl~gi~~~LdyL~~~~~~~~~~LGv~~I~L~ 55 (488)
T 1wza_A 6 TYYEIFVRSFYDSDGDGIGDLKGIIEKLDYLNDGDPETIADLGVNGIWLM 55 (488)
T ss_dssp CEEEECGGGSCCSSSSSCCCHHHHHHTHHHHCCSCTTCCSSCCCSEEEEC
T ss_pred EEEEEEChhhcCCCCCCcCCHHHHHHhhhhhhccccchhhhcCccEEEEC
Confidence 578899932 21111235799999999999 99999998875
No 302
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=26.29 E-value=2.3e+02 Score=21.97 Aligned_cols=56 Identities=21% Similarity=0.162 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHCCCeEEEEecCC-CCCCCCC--H----HHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 28 EHLTGLISAAKEQGIDFYYALSPG-LDITYSS--G----KEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~aisPG-~~~~~s~--~----~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
..++++.+.+++.|+.+.. ..|. .++++.+ + +.++.+.+-++....+|++.+.+..
T Consensus 66 ~~~~~l~~~l~~~gl~i~~-~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~ 128 (309)
T 2hk0_A 66 AELATIRKSAKDNGIILTA-GIGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKLDIHTIGGAL 128 (309)
T ss_dssp HHHHHHHHHHHHTTCEEEE-ECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHHTTCCEEEECT
T ss_pred hhHHHHHHHHHHcCCeEEE-ecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeec
Confidence 4567778888999999887 4442 1344443 2 3457788888888899999987543
No 303
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=26.26 E-value=2.1e+02 Score=21.55 Aligned_cols=56 Identities=9% Similarity=0.037 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHCCCeEE-EEecCCCCCCCCC--H----HHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 29 HLTGLISAAKEQGIDFY-YALSPGLDITYSS--G----KEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv-~aisPG~~~~~s~--~----~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
.++++.+.++++|+++. +++|....+++.+ + +.++.+.+-++....+|++...+..
T Consensus 48 ~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~ 110 (285)
T 1qtw_A 48 TIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHP 110 (285)
T ss_dssp HHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHHHHHcCCCceeEEecCCcccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECc
Confidence 45555566778899851 3444433455543 2 3466777888888899999987643
No 304
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=26.22 E-value=2.1e+02 Score=21.43 Aligned_cols=49 Identities=10% Similarity=-0.049 Sum_probs=26.7
Q ss_pred CCCeEEEEecC--CCC-CCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 40 QGIDFYYALSP--GLD-ITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 40 ~~v~Fv~aisP--G~~-~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
.|+.+|.-=++ +.+ ..+-.....+....=.+.|.+.|.+.++++..+-+
T Consensus 86 ~~iPvV~~~~~~~~~~~~~~V~~d~~~~~~~~~~~L~~~G~~~i~~i~~~~~ 137 (289)
T 1dbq_A 86 RHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLE 137 (289)
T ss_dssp TTSCEEEEECSSCCSSSCEEEEECHHHHHHHHHHHHHHTTCCSEEEECCC--
T ss_pred cCCCEEEEccCCCccCcCCEEEeCcHHHHHHHHHHHHHCCCCeEEEEecCCc
Confidence 68887765443 222 11111122334444456678889999999876543
No 305
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=26.20 E-value=60 Score=29.82 Aligned_cols=58 Identities=14% Similarity=0.196 Sum_probs=43.6
Q ss_pred hhccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 17 YWRDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 17 ~Wre~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
.+.++||. -.|++|++-|++.||.++.=.+.+- + + +.+.+-++++.+.||+.+=+=|=
T Consensus 339 d~~~~~p~---~di~~l~~Ya~~kgV~i~lw~~~~~---~--~---~~~~~~~~~~~~~Gv~gvK~Df~ 396 (641)
T 3a24_A 339 DLMQVVKE---IDLKELVDYAASKNVGIILWAGYHA---F--E---RDMENVCRHYAEMGVKGFKVDFM 396 (641)
T ss_dssp CTTCBCTT---CCHHHHHHHHHHTTCEEEEEEEHHH---H--H---TSHHHHHHHHHHHTCCEEEEECC
T ss_pred CccccCCc---CCHHHHHHHHHhcCCEEEEEeeCcc---h--H---HHHHHHHHHHHHcCCCEEEECCC
Confidence 35578886 5789999999999999887666622 1 1 33566788899999999887654
No 306
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=25.99 E-value=56 Score=25.91 Aligned_cols=26 Identities=15% Similarity=0.176 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
..++.|+++++.|.++|+..+..+|-
T Consensus 77 ~~l~~ld~~v~~a~~~Gl~vild~h~ 102 (306)
T 2cks_A 77 GFTDRMHQLIDMATARGLYVIVDWHI 102 (306)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEecC
Confidence 36899999999999999999999984
No 307
>4a5z_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; 2.30A {Homo sapiens}
Probab=25.97 E-value=73 Score=24.27 Aligned_cols=29 Identities=14% Similarity=0.211 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 22 YSVEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 22 Yp~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.++++.+.|.+|.+...+.||.|.|..+.
T Consensus 82 ~~~~Q~~~L~~ik~sL~~~gI~l~~~fs~ 110 (163)
T 4a5z_A 82 EQVQQSRGLQEIEESLRSHGVLLEVQYSS 110 (163)
T ss_dssp THHHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CHHHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46788899999999999999999999887
No 308
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=25.84 E-value=68 Score=29.21 Aligned_cols=27 Identities=7% Similarity=0.081 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.+.+++|++||++|+++||+.+.=+=|
T Consensus 375 ~~~~~efk~LV~~aH~~GIkVIlDvV~ 401 (884)
T 4aio_A 375 PSRIIEYRQMVQALNRIGLRVVMDVVY 401 (884)
T ss_dssp THHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cchHHHHHHHHHHHHhcCCceeeeecc
Confidence 357899999999999999999988755
No 309
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=25.81 E-value=98 Score=22.92 Aligned_cols=43 Identities=21% Similarity=0.275 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHCCCeEEEE-ecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEE
Q psy629 28 EHLTGLISAAKEQGIDFYYA-LSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFAL 82 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~a-isPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Fai 82 (166)
+.+.++++.+++.|+..+.. ++|. + ....++++.+.|++..++
T Consensus 90 ~~~~~~~~~~~~~g~~~~v~~~~~~------t------~~~~~~~~~~~g~d~i~v 133 (211)
T 3f4w_A 90 LTIQSCIRAAKEAGKQVVVDMICVD------D------LPARVRLLEEAGADMLAV 133 (211)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTCS------S------HHHHHHHHHHHTCCEEEE
T ss_pred hHHHHHHHHHHHcCCeEEEEecCCC------C------HHHHHHHHHHcCCCEEEE
Confidence 45677888888888888776 4441 1 234456677788887554
No 310
>2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A*
Probab=25.69 E-value=32 Score=28.97 Aligned_cols=52 Identities=19% Similarity=0.197 Sum_probs=37.9
Q ss_pred hhccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCC----CCC----CHHHHHHHHHHH
Q psy629 17 YWRDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDI----TYS----SGKEVATLKRKL 69 (166)
Q Consensus 17 ~Wre~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~----~~s----~~~d~~~L~~K~ 69 (166)
+++..|.++...-|.+.+++.++.||+ +++|+|.+-= .|. ..++...+++.+
T Consensus 100 ~L~~~~~~~yA~Yl~k~i~~y~~~Gi~-i~~is~qNEP~~~~~~~~~~~t~~~~~~fik~~ 159 (383)
T 2y24_A 100 RLLPANYSAYTSHLLDFSKYMQTNGAP-LYAISIQNEPDWKPDYESCEWSGDEFKSYLKSQ 159 (383)
T ss_dssp BBCGGGHHHHHHHHHHHHHHHHHTTCC-CSEEESCSCTTCCCSSBCCBCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCC-eEEecccccCCCCCCCCccCcCHHHHHHHHHHh
Confidence 345568889999999999999999999 8999996532 222 245556665544
No 311
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=25.68 E-value=2.5e+02 Score=22.26 Aligned_cols=56 Identities=16% Similarity=0.131 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecCCC-CCCCC--CHHHHHHHHHHHHHHHHcCCCeeEE
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSPGL-DITYS--SGKEVATLKRKLEQVAQFGCRGFAL 82 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisPG~-~~~~s--~~~d~~~L~~K~~ql~~lGvr~Fai 82 (166)
++..+.|+++++.+++.+++|++ .-|- -+..+ +.+.++.+.+-|.+|.+. +.-+.|
T Consensus 44 ~~~~~~l~~lv~~~~~~~~D~vl--iaGD~l~d~~~~~~~~~~~~~~~l~~L~~~-~pv~~i 102 (336)
T 2q8u_A 44 EELKKALDKVVEEAEKREVDLIL--LTGDLLHSRNNPSVVALHDLLDYLKRMMRT-APVVVL 102 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEE--EESCSBSCSSCCCHHHHHHHHHHHHHHHHH-SCEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCCEEE--ECCccccCCCCCCHHHHHHHHHHHHHHHhc-CCEEEE
Confidence 45678899999999999999874 4565 33333 234455566666666654 555553
No 312
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=25.35 E-value=2.1e+02 Score=23.87 Aligned_cols=59 Identities=15% Similarity=0.271 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecC-CCCCCCCCHHH-----HHHHHHHHHHH--HHcCCCeeEEe
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALSP-GLDITYSSGKE-----VATLKRKLEQV--AQFGCRGFALL 83 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~aisP-G~~~~~s~~~d-----~~~L~~K~~ql--~~lGvr~Fail 83 (166)
++++.|.++.++|++.|+.|..-+=| +-.+.-..+.+ -+.+..=.+.. .++|++..=+-
T Consensus 144 ~q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~a~R~~~~~elGaDv~Kve 210 (332)
T 3iv3_A 144 QKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKVHKVNDAMKVFSAERFGIDVLKVE 210 (332)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHHHHHHHTSGGGCCSEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccCHHHHHHHHHHHhhcCcCCcEEEEe
Confidence 57899999999999999999986633 22221111122 23355555566 36799888765
No 313
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=25.22 E-value=1.1e+02 Score=24.92 Aligned_cols=23 Identities=26% Similarity=0.231 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHCCCeEEEEec
Q psy629 27 AEHLTGLISAAKEQGIDFYYALS 49 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~ais 49 (166)
.+.+.++++.|+++|+.|++-++
T Consensus 191 ~~~~~~~~~~a~~~g~~v~~d~~ 213 (365)
T 3loo_A 191 FESALSVAKEAAATGRMFMMNLS 213 (365)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCEEEEECC
Confidence 35678899999999999998886
No 314
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=25.00 E-value=42 Score=29.43 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=29.5
Q ss_pred EEEEecCCC--CCCCCCHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 44 FYYALSPGL--DITYSSGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 44 Fv~aisPG~--~~~~s~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
.+|-|+|.. +-+-+...+++-|++||+-|.+|||+..-|.
T Consensus 10 viYqi~~~~F~d~~~dg~Gdl~gi~~~ldyl~~LGv~~I~l~ 51 (558)
T 1uok_A 10 VVYQIYPRSFMDSNGDGIGDLRGIISKLDYLKELGIDVIWLS 51 (558)
T ss_dssp CEEEECGGGTCCSSSSSSCCHHHHHTTHHHHHHHTCCEEEEC
T ss_pred eEEEEecHHhcCCCCCCcCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 478888832 2111123579999999999999999998875
No 315
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=24.98 E-value=63 Score=28.84 Aligned_cols=22 Identities=23% Similarity=0.400 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHCCCeEEEEe
Q psy629 27 AEHLTGLISAAKEQGIDFYYAL 48 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~ai 48 (166)
.++|++|+++|+++||+.+.=+
T Consensus 208 ~~dfk~Lv~~aH~~GI~VilD~ 229 (599)
T 3bc9_A 208 KGELENAIDALHNNDIKVYFDA 229 (599)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEE
Confidence 6899999999999999987754
No 316
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=24.98 E-value=1.5e+02 Score=22.86 Aligned_cols=26 Identities=27% Similarity=0.287 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
..|+..|.++.++-++.||. +++||.
T Consensus 46 ~~el~~l~~l~~ef~~~~v~-vigIS~ 71 (233)
T 2v2g_A 46 TTELGRVIQLEGDFKKRGVK-LIALSC 71 (233)
T ss_dssp HHHHHHHHHTHHHHHHTTEE-EEEEES
T ss_pred HHHHHHHHHHHHHHHHcCCE-EEEEcC
Confidence 46788899998888889998 578886
No 317
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=24.96 E-value=1.2e+02 Score=24.03 Aligned_cols=51 Identities=14% Similarity=-0.003 Sum_probs=36.3
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
+..++-+..++.++.+|++.|+..+... + +.+..+ ..+.++|++.|++-.|
T Consensus 188 ~~~p~v~~a~~~iv~aa~aaG~~~g~~~--~------~~~~~~------~~~~~~G~~~~s~~~D 238 (261)
T 3qz6_A 188 TEHPKVYECYEKVYRAADRQGVVKGFFT--A------ADAAKM------GWAVERGAQMLLWSGD 238 (261)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTCEEEEEE--S------SCGGGG------HHHHHTTCCEEEEEEH
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEEEe--C------CHHHHH------HHHHHCCCCEEEEhhH
Confidence 3446677889999999999999876542 1 112110 5678999999997755
No 318
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=24.76 E-value=2e+02 Score=23.61 Aligned_cols=57 Identities=12% Similarity=0.244 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCC-------CCCCCC------HHHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGL-------DITYSS------GKEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~-------~~~~s~------~~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
-..++++.+.++++|+.++ +++|.. +-++.+ .+.++.+.+-++....+|++.+.+..
T Consensus 68 ~~~~~~l~~~l~~~GL~i~-~~~~~~~~~p~~~~g~l~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vvv~~ 137 (386)
T 1muw_A 68 ESHIKRFRQALDATGMTVP-MATTNLFTHPVFKDGGFTANDRDVRRYALRKTIRNIDLAVELGAKTYVAWG 137 (386)
T ss_dssp HHHHHHHHHHHHHHTCBCC-EEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHHHHHhCCeEE-EEecccccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECC
Confidence 3567778888889999864 455522 113433 23457888889999999999987643
No 319
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=24.76 E-value=49 Score=29.36 Aligned_cols=40 Identities=18% Similarity=0.332 Sum_probs=29.9
Q ss_pred EEEEecCCC--CCCCCCHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 44 FYYALSPGL--DITYSSGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 44 Fv~aisPG~--~~~~s~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
.+|-|+|.- +-+-+..-+++.|.+||+-|.+|||+..-|.
T Consensus 19 viYqi~~~~F~d~~~dg~Gdl~gi~~~Ldyl~~LGv~~i~l~ 60 (589)
T 3aj7_A 19 TFYQIYPASFKDSNDDGWGDMKGIASKLEYIKELGADAIWIS 60 (589)
T ss_dssp CEEEECGGGSCCSSSSSSCCHHHHHHTHHHHHHHTCSEEEEC
T ss_pred eEEEEEhHHhcCCCCCCccCHHHHHHHHHHHHHcCCCEEEEC
Confidence 588899932 2111112479999999999999999998875
No 320
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=24.67 E-value=55 Score=24.95 Aligned_cols=30 Identities=17% Similarity=0.107 Sum_probs=26.0
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.+.++-++.+.++++.|.++||..+..+|-
T Consensus 83 ~~~~~~~~~~d~~~~~a~~~Gi~vil~~~~ 112 (351)
T 3vup_A 83 DKQGTMLDDMKDLLDTAKKYNILVFPCLWN 112 (351)
T ss_dssp CSSSCHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cccHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 345678999999999999999999988874
No 321
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=24.51 E-value=1.8e+02 Score=23.42 Aligned_cols=49 Identities=14% Similarity=0.036 Sum_probs=35.2
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 22 YSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 22 Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
..++-+..++.++.+|++.|+..+. .. .+. .-..++.++|++.|++--|
T Consensus 212 ~~p~v~~a~~~iv~aaraaG~~~gv--~~------~d~-------~~a~~~~~~G~~~~s~~~d 260 (287)
T 2v5j_A 212 QHPEVQAAIEQAIVQIRESGKAPGI--LI------ANE-------QLAKRYLELGALFVAVGVD 260 (287)
T ss_dssp CSHHHHHHHHHHHHHHHHTTSEEEE--EC------CCH-------HHHHHHHHTTCSEEEEEEH
T ss_pred CCHHHHHHHHHHHHHHHHcCCeeEE--ec------CCH-------HHHHHHHHhCCCEEEECcH
Confidence 3456678899999999999998744 22 122 2446778999999986543
No 322
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=24.48 E-value=80 Score=23.16 Aligned_cols=49 Identities=16% Similarity=0.089 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCC-eeEEecC
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCR-GFALLFD 85 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr-~FailfD 85 (166)
+|+..|.++.+.-++.|+.++.+||+. +.+..++ .+.+.|.. .|-++.|
T Consensus 62 ~e~p~l~~~~~~~~~~gv~vv~~iS~D------~~~~~~~------f~~~~~~~~~fp~l~D 111 (173)
T 3mng_A 62 THLPGFVEQAEALKAKGVQVVACLSVN------DAFVTGE------WGRAHKAEGKVRLLAD 111 (173)
T ss_dssp THHHHHHHTHHHHHTTTCCEEEEEESS------CHHHHHH------HHHHTTCTTTCEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEEcCC------CHHHHHH------HHHHhCCCCceEEEEC
Confidence 577788888888888999988778872 2222222 23445665 5888877
No 323
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=24.39 E-value=58 Score=24.39 Aligned_cols=20 Identities=30% Similarity=0.649 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHCCCeEEEE
Q psy629 28 EHLTGLISAAKEQGIDFYYA 47 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~a 47 (166)
..+.+|++.|++.||+|+.|
T Consensus 102 ~~l~eli~~a~~~Gvk~~aC 121 (160)
T 3pnx_A 102 PKLSDLLSGARKKEVKFYAC 121 (160)
T ss_dssp CCHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHCCCEEEEe
Confidence 45799999999999999876
No 324
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=24.00 E-value=71 Score=28.31 Aligned_cols=24 Identities=25% Similarity=0.324 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.++|++|+++|+++||+.+.=+-|
T Consensus 87 ~~df~~lv~~~h~~Gi~VilD~V~ 110 (589)
T 3aj7_A 87 NEDCFALIEKTHKLGMKFITDLVI 110 (589)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEecc
Confidence 589999999999999999877655
No 325
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=23.92 E-value=1.9e+02 Score=23.64 Aligned_cols=63 Identities=13% Similarity=0.208 Sum_probs=40.4
Q ss_pred hccCCCHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 18 WRDLYSVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 18 Wre~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
++.....+.++++++++++|++.|+.+++--.+|..+. .+.++ +..--..-.++|.+....-+
T Consensus 148 ~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~--~d~e~--i~~aariA~elGAD~VKt~~ 210 (295)
T 3glc_A 148 IGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMV--RDQRY--FSLATRIAAEMGAQIIKTYY 210 (295)
T ss_dssp TTSTTHHHHHHHHHHHHHHHHTTTCCEEEEECC----C--CSHHH--HHHHHHHHHHTTCSEEEEEC
T ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccC--CCHHH--HHHHHHHHHHhCCCEEEeCC
Confidence 55666677889999999999999999887544465553 22222 22222345689999888764
No 326
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=23.91 E-value=1.3e+02 Score=25.58 Aligned_cols=59 Identities=19% Similarity=0.221 Sum_probs=35.2
Q ss_pred hhccCCCHHHHHHHHHHHHHHHHCCCe-EEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 17 YWRDLYSVEEAEHLTGLISAAKEQGID-FYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 17 ~Wre~Yp~~~l~~l~~L~~~a~~~~v~-Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
.-+..++. +++.+.++.+++.|+. +..-+=.|+.- .+. +.+.+=++.+.++|+.++.++
T Consensus 181 ~i~R~~~~---~~~~~ai~~~r~~G~~~v~~dlI~GlPg--et~---e~~~~tl~~~~~l~~~~i~~y 240 (457)
T 1olt_A 181 LVNREQDE---EFIFALLNHAREIGFTSTNIDLIYGLPK--QTP---ESFAFTLKRVAELNPDRLSVF 240 (457)
T ss_dssp HHTCCCCH---HHHHHHHHHHHHTTCCSCEEEEEESCTT--CCH---HHHHHHHHHHHHHCCSEEEEE
T ss_pred HhCCCCCH---HHHHHHHHHHHHcCCCcEEEEEEcCCCC--CCH---HHHHHHHHHHHhcCcCEEEee
Confidence 33445554 4566677777777776 55444333321 123 445555666778999988876
No 327
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=23.61 E-value=56 Score=25.21 Aligned_cols=22 Identities=14% Similarity=0.308 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHCCCeEEEEecC
Q psy629 29 HLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisP 50 (166)
+++++++.|++.|+..++.++|
T Consensus 99 e~~~~~~~a~~~Gl~~iv~v~~ 120 (219)
T 2h6r_A 99 DIEAVINKCKNLGLETIVCTNN 120 (219)
T ss_dssp HHHHHHHHHHHHTCEEEEEESS
T ss_pred HHHHHHHHHHHCCCeEEEEeCC
Confidence 3789999999999999999998
No 328
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=23.53 E-value=3.1e+02 Score=22.48 Aligned_cols=105 Identities=10% Similarity=0.089 Sum_probs=62.7
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEecCCC--C---CC--CCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCCCH
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALSPGL--D---IT--YSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESEMSE 93 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisPG~--~---~~--~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~~~ 93 (166)
.+.++.++.++++++.|+++|+..+.-+|--. . +. -...+.+.++-+++.+-+.-- ... .|+=+..+...
T Consensus 77 ~~~~~~l~~ld~vV~~a~~~Gi~vIlDlH~~~~~~g~~~~~~~~~~~~~~~~w~~iA~ryk~~-~~V--i~el~NEP~~~ 153 (340)
T 3qr3_A 77 NLDSTSISKYDQLVQGCLSLGAYCIVDIHNYARWNGGIIGQGGPTNAQFTSLWSQLASKYASQ-SRV--WFGIMNEPHDV 153 (340)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTEETTEETTTTSSCHHHHHHHHHHHHHHHTTC-TTE--EEECCSCCCSS
T ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEEEecCCcccCCcccCCCHHHHHHHHHHHHHHHHHhCCC-CcE--EEEecCCCCCC
Confidence 45678899999999999999999999999521 1 11 013456666666666666532 222 36555544322
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHcCCCCceEcccc-cccc
Q psy629 94 ADKEVFQSFAHAQVSVTNEVFEHLGQPKFMLCPTQ-YCST 132 (166)
Q Consensus 94 ~d~~~f~~~a~aq~~l~n~v~~~l~~~~l~~cPt~-Y~~~ 132 (166)
+.+. +.....++++.|.+.-+...++++|+. |+++
T Consensus 154 -~~~~---w~~~~~~~i~aIR~~~~~~~~Iiv~g~~w~~~ 189 (340)
T 3qr3_A 154 -NINT---WAATVQEVVTAIRNAGATSQFISLPGNDWQSA 189 (340)
T ss_dssp -CHHH---HHHHHHHHHHHHHHTTCCSSCEEEECSGGGBT
T ss_pred -CHHH---HHHHHHHHHHHHHhhCCCccEEEEeCCccccc
Confidence 2222 233344556666554333247777764 5554
No 329
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=23.17 E-value=2.3e+02 Score=21.03 Aligned_cols=113 Identities=11% Similarity=0.042 Sum_probs=54.7
Q ss_pred CCCeEEEEecCC---CCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCCCCCHHHHHHHhhHHH------------
Q psy629 40 QGIDFYYALSPG---LDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIESEMSEADKEVFQSFAH------------ 104 (166)
Q Consensus 40 ~~v~Fv~aisPG---~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~~~~~~d~~~f~~~a~------------ 104 (166)
.|+.+|.-=++- ..+.+-.....+.-..=.+.|.+.|.+.++++-.+-.. ...-.+.|.....
T Consensus 78 ~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~i~~i~~~~~~--~~~R~~gf~~~l~~~~~~~~~~~~~ 155 (280)
T 3gyb_A 78 SLPPFVIAGTRITQASTHDSVANDDFRGAEIATKHLIDLGHTHIAHLRVGSGA--GLRRFESFEATMRAHGLEPLSNDYL 155 (280)
T ss_dssp -CCCEEEESCCCSSSCSTTEEEECHHHHHHHHHHHHHHTTCCSEEEECCSSHH--HHHHHHHHHHHHHHTTCCCEECCCC
T ss_pred cCCCEEEECCCCCCCCCCCEEEechHHHHHHHHHHHHHCCCCeEEEEeCCCch--HHHHHHHHHHHHHHcCcCCCccccc
Confidence 566666543332 11211111233444445567788899999998765333 1111222321100
Q ss_pred ------HHHHHHHHHHHHcCCCCceEccccccccccCCCCCChhHHHHHhhccCCCceEEee
Q psy629 105 ------AQVSVTNEVFEHLGQPKFMLCPTQYCSTRAVPNVKNSEYLNTLGSKLAKEIDIMWT 160 (166)
Q Consensus 105 ------aq~~l~n~v~~~l~~~~l~~cPt~Y~~~~~~~~~~~~~Yl~~l~~~L~~~i~i~WT 160 (166)
.-...+.++.+..+.+.-+||......-. --..++++|-..|.+|.|+=-
T Consensus 156 ~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~~a~g------~~~al~~~g~~vP~di~vvg~ 211 (280)
T 3gyb_A 156 GPAVEHAGYTETLALLKEHPEVTAIFSSNDITAIG------ALGAARELGLRVPEDLSIIGY 211 (280)
T ss_dssp SCCCHHHHHHHHHHHHHHCTTCCEEEESSHHHHHH------HHHHHHHHTCCTTTTCEEEEE
T ss_pred CCCCHHHHHHHHHHHHhCCCCCCEEEECChHHHHH------HHHHHHHcCCCCCCeeEEEEE
Confidence 00112233333333455677765443221 245677787777788877643
No 330
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=23.11 E-value=1.6e+02 Score=20.34 Aligned_cols=48 Identities=19% Similarity=0.203 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
..++..|.++.+.-++.||.| ++||. ++.+.+++..++ .|+. |-++.|
T Consensus 46 ~~~~~~l~~~~~~~~~~~v~v-v~vs~------d~~~~~~~~~~~------~~~~-~~~~~d 93 (161)
T 3drn_A 46 TREASAFRDNWDLLKDYDVVV-IGVSS------DDINSHKRFKEK------YKLP-FILVSD 93 (161)
T ss_dssp HHHHHHHHHTHHHHHTTCEEE-EEEES------CCHHHHHHHHHH------TTCC-SEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCEE-EEEeC------CCHHHHHHHHHH------hCCC-ceEEEC
Confidence 457788888888888888876 46776 234444444443 3554 666665
No 331
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=23.08 E-value=1.3e+02 Score=25.12 Aligned_cols=57 Identities=23% Similarity=0.261 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHCCCeE-EEEecCCCC-CCCCC-HHHHHHHHHHHHHHHHcCCCee
Q psy629 24 VEEAEHLTGLISAAKEQGIDF-YYALSPGLD-ITYSS-GKEVATLKRKLEQVAQFGCRGF 80 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~F-v~aisPG~~-~~~s~-~~d~~~L~~K~~ql~~lGvr~F 80 (166)
++-++.|++.++.|.+.||.- -+-|=||.. -.|+. .++--.|++.++.+.++|+--+
T Consensus 173 ~ev~~~l~~~i~~a~~~GI~~~~IilDPG~G~~~F~Kt~~~n~~lL~~l~~l~~lg~PvL 232 (314)
T 3tr9_A 173 QSVKKELQESIQRCKKAGISEDRIIIDPGFGQGNYGKNVSENFYLLNKLPEFVAMGLPVL 232 (314)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEECCCCSGGGCCCHHHHHHHHHTTHHHHTTSSCBE
T ss_pred HHHHHHHHHHHHHHHHcCCCHhHEEEeCCCCchhhcCCHHHHHHHHHHHHHHhcCCCCEE
Confidence 456789999999999999951 233788865 01343 3445678889999999987653
No 332
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=23.03 E-value=47 Score=27.79 Aligned_cols=42 Identities=12% Similarity=0.208 Sum_probs=32.2
Q ss_pred CHHHHHHHHHHHHHH--------HHcCCCeeEEecCCCCCCCCHHHHHHHh
Q psy629 58 SGKEVATLKRKLEQV--------AQFGCRGFALLFDDIESEMSEADKEVFQ 100 (166)
Q Consensus 58 ~~~d~~~L~~K~~ql--------~~lGvr~FailfDDi~~~~~~~d~~~f~ 100 (166)
+++.+.+|+.|+... .+.|+..+.| ||+..+.++.++.+.|.
T Consensus 184 ~Pe~~~~ll~~i~~~~~~y~~~qi~aGad~i~i-fDs~~~~Lsp~~f~ef~ 233 (368)
T 4exq_A 184 RPDLMHRILDVNAQAVAAYLNAQIEAGAQAVMI-FDTWGGALADGAYQRFS 233 (368)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEE-EETTGGGSCTTHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE-eCCccccCCHHHHHHHh
Confidence 466778888887653 5899998775 68888888888877774
No 333
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=22.94 E-value=2.9e+02 Score=22.05 Aligned_cols=51 Identities=14% Similarity=0.225 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCCC
Q psy629 27 AEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIES 89 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~~ 89 (166)
.++|++|++..++++|..++. .|. ++. +-.+.| -.+.|++..+.+++|.-+
T Consensus 218 ~~~l~~l~~~ik~~~v~~if~-e~~----~~~-~~~~~i------a~~~g~~v~~~~~~~~l~ 268 (294)
T 3hh8_A 218 PDQISSLIEKLKVIKPSALFV-ESS----VDR-RPMETV------SKDSGIPIYSEIFTDSIA 268 (294)
T ss_dssp HHHHHHHHHHHHHSCCSCEEE-ETT----SCS-HHHHHH------HHHHCCCEEEEECSSSCC
T ss_pred HHHHHHHHHHHHHcCCCEEEE-eCC----CCc-HHHHHH------HHHhCCcEEeeecCcccC
Confidence 478899999999999999988 332 232 222332 246899998878877654
No 334
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=22.93 E-value=68 Score=24.07 Aligned_cols=54 Identities=7% Similarity=-0.127 Sum_probs=27.3
Q ss_pred HHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCC
Q psy629 34 ISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDI 87 (166)
Q Consensus 34 ~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi 87 (166)
++.+++.|+.+|.-=++-.++.+-.....+....=.+.|.+.|.|.++++..+-
T Consensus 71 ~~~~~~~~iPvV~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G~~~i~~i~~~~ 124 (276)
T 2h0a_A 71 EEGRLPTERPVVLVDAQNPRYDSVYLDNRLGGRLAGAYLARFPGPIFAIAVEEE 124 (276)
T ss_dssp ---CCSCSSCEEEESSCCTTSEEEEECSHHHHHHHHHHHTTSSSCEEEEEECCS
T ss_pred HHHHhhcCCCEEEEeccCCCCCEEEEccHHHHHHHHHHHHHcCCCeEEEEecCc
Confidence 334455677766543331111110011223333445667788999999987654
No 335
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=22.82 E-value=2.2e+02 Score=22.46 Aligned_cols=47 Identities=13% Similarity=0.057 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEec
Q psy629 23 SVEEAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLF 84 (166)
Q Consensus 23 p~~~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~Failf 84 (166)
.++-+..++.++.+|++.|+..+. .. ++. .-..++.++|++.|++--
T Consensus 192 ~p~v~~a~~~iv~aa~aaG~~~~v--~~------~d~-------~~a~~~~~~G~~~~s~~~ 238 (267)
T 2vws_A 192 HPEVQRIIETSIRRIRAAGKAAGF--LA------VAP-------DMAQQCLAWGANFVAVGV 238 (267)
T ss_dssp THHHHHHHHHHHHHHHHTTCEEEE--EC------SSH-------HHHHHHHHTTCCEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHhCCeEEE--ec------CCH-------HHHHHHHHCCCCEEEEch
Confidence 355677889999999999998754 22 122 244678899999998654
No 336
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=22.53 E-value=1.2e+02 Score=23.49 Aligned_cols=50 Identities=16% Similarity=0.094 Sum_probs=34.7
Q ss_pred HHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCC-CeeEEec
Q psy629 30 LTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGC-RGFALLF 84 (166)
Q Consensus 30 l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGv-r~Failf 84 (166)
.+++++.+++.|++.+..-|=+..- -..+.+.++++++.++|. =.+++--
T Consensus 97 ~~~l~~~~~~~g~kvI~S~Hdf~~t-----p~~~el~~~~~~~~~~gaivKia~~a 147 (219)
T 2egz_A 97 LVKLYNITKEAGKKLIISYHNFELT-----PPNWIIREVLREGYRYGGIPKIAVKA 147 (219)
T ss_dssp HHHHHHHHHHTTCEEEEEEEESSCC-----CCHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred HHHHHHHHHHcCCEEEEEecCCCCC-----cCHHHHHHHHHHHHHcCCEEEEEEcc
Confidence 4577888889999988888842211 114678889999999994 3355543
No 337
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=22.48 E-value=1.3e+02 Score=23.93 Aligned_cols=22 Identities=27% Similarity=0.218 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHCCCeEEEEec
Q psy629 28 EHLTGLISAAKEQGIDFYYALS 49 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~ais 49 (166)
+.+.++++.|+++|+.|++-++
T Consensus 178 ~~~~~~~~~a~~~g~~v~~d~~ 199 (347)
T 3otx_A 178 NHVLQACRKAREVDGLFMINLS 199 (347)
T ss_dssp HHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHhCCEEEeeCc
Confidence 4577889999999999888877
No 338
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=22.45 E-value=1.4e+02 Score=23.57 Aligned_cols=27 Identities=19% Similarity=0.360 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEecCC
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALSPG 51 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~aisPG 51 (166)
+.++.+.++++.|+++||..+..++-|
T Consensus 88 ~~~~~ld~~~~~a~~~Gi~vil~l~~~ 114 (353)
T 2c0h_A 88 TLISDMRAYLHAAQRHNILIFFTLWNG 114 (353)
T ss_dssp THHHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEccCc
Confidence 678999999999999999999887544
No 339
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=22.40 E-value=1.9e+02 Score=23.47 Aligned_cols=23 Identities=22% Similarity=0.228 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHCCCeEEEEec
Q psy629 27 AEHLTGLISAAKEQGIDFYYALS 49 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~ais 49 (166)
.+.+.++++.|+++|+.+++-.+
T Consensus 193 ~~~~~~~~~~a~~~g~~v~ld~~ 215 (370)
T 3vas_A 193 YEGMLKIAKHSLENEKLFCFNLS 215 (370)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCEEEEECC
Confidence 35678899999999999988876
No 340
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=22.21 E-value=1.4e+02 Score=24.85 Aligned_cols=55 Identities=15% Similarity=0.080 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHCCCe-EEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCCe
Q psy629 24 VEEAEHLTGLISAAKEQGID-FYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCRG 79 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~-Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~ 79 (166)
++-.+.|.+.++.|.+.||. =-+-|=||..+-= +.++--.|++.++++.++|+--
T Consensus 191 ~ev~~~l~~~i~~a~~aGI~~~~IilDPG~GF~K-t~~~nl~ll~~l~~l~~lg~Pv 246 (318)
T 2vp8_A 191 DAVISQVTAAAERAVAAGVAREKVLIDPAHDFGK-NTFHGLLLLRHVADLVMTGWPV 246 (318)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEETTTTCCT-TSHHHHHHHHTHHHHHTTSSCB
T ss_pred HHHHHHHHHHHHHHHHcCCChhhEEEcCCCCccc-CHHHHHHHHHHHHHHHhCCCCE
Confidence 34458899999999999995 1234678876532 3355577889999999998754
No 341
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=22.19 E-value=98 Score=25.26 Aligned_cols=28 Identities=18% Similarity=0.077 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 23 SVEEAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 23 p~~~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
.++.++.|.++++.|.++|+..+..+|-
T Consensus 116 ~~~~l~~ld~~v~~a~~~Gi~Vild~H~ 143 (359)
T 4hty_A 116 VKGYLELLDQVVAWNNELGIYTILDWHS 143 (359)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4567899999999999999999999985
No 342
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=22.18 E-value=42 Score=28.49 Aligned_cols=52 Identities=23% Similarity=0.220 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEEecCCC------------------CCCCCCHHHHHHHHHHHHHHHHc
Q psy629 24 VEEAEHLTGLISAAKEQGIDFYYALSPGL------------------DITYSSGKEVATLKRKLEQVAQF 75 (166)
Q Consensus 24 ~~~l~~l~~L~~~a~~~~v~Fv~aisPG~------------------~~~~s~~~d~~~L~~K~~ql~~l 75 (166)
++-++.|..+++.|+++||+.+..|+-+. +..|++++-++..++-+++|.+-
T Consensus 96 ~~~~~~LD~~i~~A~k~GI~viL~l~~~w~~~GG~~~y~~~~g~~~~~~f~~dp~~~~~~~~~~~~l~~r 165 (383)
T 3pzg_A 96 QNGFERLDYTIAKAKELGIKLIIVLVNNWDDFGGMNQYVRWFGGTHHDDFYRDERIKEEYKKYVSFLINH 165 (383)
T ss_dssp EEHHHHHHHHHHHHHHHTCEEEEECCBSSSTTSHHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEccccccccCCccchhhhcCCCccccccCCHHHHHHHHHHHHHHHhh
Confidence 67799999999999999999999997321 11234455566667777777665
No 343
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=22.14 E-value=2.5e+02 Score=22.75 Aligned_cols=65 Identities=14% Similarity=0.108 Sum_probs=45.8
Q ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEe-cCCCCCCCCCHH--HHHHHHHHHHHHHHcCCCeeEEecCCC
Q psy629 23 SVEEAEHLTGLISAAKEQGIDFYYAL-SPGLDITYSSGK--EVATLKRKLEQVAQFGCRGFALLFDDI 87 (166)
Q Consensus 23 p~~~l~~l~~L~~~a~~~~v~Fv~ai-sPG~~~~~s~~~--d~~~L~~K~~ql~~lGvr~FailfDDi 87 (166)
-.+.-+++..+++.|.+.++-+++=. |||..+.-.-.. ...++.+.+..+.+.||-.++|+.+-.
T Consensus 138 g~~~~~K~~r~ie~A~~~~lPlI~l~dsgGar~qEGi~sl~q~aki~~~l~~~s~~~vP~Isvv~g~~ 205 (285)
T 2f9i_B 138 GSVIGEKICRIIDYCTENRLPFILFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPT 205 (285)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCEEEEEEECSCCGGGHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHcCCCEEEEEeCCCcchhhhhhhHhHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 34567899999999999999986544 788754210000 224444568888889999999997653
No 344
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=21.93 E-value=40 Score=28.76 Aligned_cols=24 Identities=8% Similarity=0.129 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHcCCCeeEEe
Q psy629 60 KEVATLKRKLEQVAQFGCRGFALL 83 (166)
Q Consensus 60 ~d~~~L~~K~~ql~~lGvr~Fail 83 (166)
-+++.|.+||+-|.+|||+..-|.
T Consensus 40 G~~~gi~~~LdyL~~LGv~~I~l~ 63 (484)
T 2aaa_A 40 GSWQGIIDHLDYIEGMGFTAIWIS 63 (484)
T ss_dssp CCHHHHHHTHHHHHTTTCCEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEeC
Confidence 479999999999999999998876
No 345
>4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B
Probab=21.85 E-value=1.3e+02 Score=25.63 Aligned_cols=60 Identities=13% Similarity=0.137 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCCCCCC---------CCHHHHHHHHHHHHHHHHcCCCeeEEe-cCCCC
Q psy629 29 HLTGLISAAKEQGIDFYYALSPGLDITY---------SSGKEVATLKRKLEQVAQFGCRGFALL-FDDIE 88 (166)
Q Consensus 29 ~l~~L~~~a~~~~v~Fv~aisPG~~~~~---------s~~~d~~~L~~K~~ql~~lGvr~Fail-fDDi~ 88 (166)
.++.+.+.|+++|+.|+=+++||.+-.. -....=+.+.+.++++.+.|.+..-|. |+|..
T Consensus 262 ~~~~d~~~~~~~g~~y~p~V~Pg~d~t~~~~~~~~~~~~r~~~~~~~~~~~~a~~~~~~~V~I~sWNEw~ 331 (382)
T 4acy_A 262 NWKSMQQWAKAHNKLFIPSVGPGYIDTRIRPWNGSTTRDRENGKYYDDMYKAAIESGASYISITSFNEWH 331 (382)
T ss_dssp GHHHHHHHHHHTTCEEECEECSCBCCTTTCTTCGGGCBCCGGGHHHHHHHHHHHHTTCSCEEESCSSCGG
T ss_pred cHHHHHHHHHHCCCeEEeEEccCCCCCCCCCCCCccccCCCCHHHHHHHHHHHHhcCCCEEEEEeccccc
Confidence 3457778888999999999999975211 011113567777888889999875543 77766
No 346
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=21.66 E-value=93 Score=25.49 Aligned_cols=23 Identities=22% Similarity=0.333 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHCCCeEEEEec
Q psy629 27 AEHLTGLISAAKEQGIDFYYALS 49 (166)
Q Consensus 27 l~~l~~L~~~a~~~~v~Fv~ais 49 (166)
++.+.++++.|++.|+++.+.+|
T Consensus 59 ~~~~~~~~~~ak~~Gl~v~ld~h 81 (334)
T 1fob_A 59 LDYNLELAKRVKAAGMSLYLDLH 81 (334)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 78999999999999999999988
No 347
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=21.26 E-value=2.7e+02 Score=21.12 Aligned_cols=55 Identities=13% Similarity=0.007 Sum_probs=29.8
Q ss_pred HHHHHHHHCCCeEEEEecC--CCC----CCCCCHHHHHHHHHHHHHHHHcC---CCeeEEecCC
Q psy629 32 GLISAAKEQGIDFYYALSP--GLD----ITYSSGKEVATLKRKLEQVAQFG---CRGFALLFDD 86 (166)
Q Consensus 32 ~L~~~a~~~~v~Fv~aisP--G~~----~~~s~~~d~~~L~~K~~ql~~lG---vr~FailfDD 86 (166)
+.++.+++.||.+|.-=++ +.+ +.+-.....+.-..=.+.|.+.| .|.++++-..
T Consensus 74 ~~~~~~~~~~iPvV~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~g~g~~~~I~~i~~~ 137 (306)
T 2vk2_A 74 PVLKEAKDAEIPVFLLDRSIDVKDKSLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGT 137 (306)
T ss_dssp HHHHHHHHTTCCEEEESSCCCCSCGGGSSEEEECCHHHHHHHHHHHHHHHHTTSCEEEEEEECS
T ss_pred HHHHHHHHCCCCEEEecCCCCCCCccceEEEEecCHHHHHHHHHHHHHHhcCCCCCeEEEEEcC
Confidence 3445566788887765432 211 11101112334444445678888 8999988654
No 348
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=21.15 E-value=84 Score=22.17 Aligned_cols=24 Identities=8% Similarity=-0.013 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHCCCeEEEEecCCC
Q psy629 28 EHLTGLISAAKEQGIDFYYALSPGL 52 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~aisPG~ 52 (166)
+..-++++.|.+.|++-+| ++||.
T Consensus 69 ~~v~~~v~e~~~~g~k~v~-~~~G~ 92 (122)
T 3ff4_A 69 QNQLSEYNYILSLKPKRVI-FNPGT 92 (122)
T ss_dssp HHHGGGHHHHHHHCCSEEE-ECTTC
T ss_pred HHHHHHHHHHHhcCCCEEE-ECCCC
Confidence 3455677788888999877 89986
No 349
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=21.14 E-value=87 Score=27.92 Aligned_cols=25 Identities=20% Similarity=0.349 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecC
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSP 50 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisP 50 (166)
..++|++||++|+++||+.+.=+-|
T Consensus 180 ~~~~~~~lv~~~H~~Gi~VilD~V~ 204 (637)
T 1gjw_A 180 VDEEFKAFVEACHILGIRVILDFIP 204 (637)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred hHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3789999999999999999988765
No 350
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=21.12 E-value=84 Score=25.07 Aligned_cols=27 Identities=33% Similarity=0.427 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHCCCeEEEEecCCCCC
Q psy629 28 EHLTGLISAAKEQGIDFYYALSPGLDI 54 (166)
Q Consensus 28 ~~l~~L~~~a~~~~v~Fv~aisPG~~~ 54 (166)
..+.+.++.+++.|++.+++|+|+.++
T Consensus 121 ~~~~~~i~~ir~~G~k~Gvalnp~Tp~ 147 (246)
T 3inp_A 121 EHIDRSLQLIKSFGIQAGLALNPATGI 147 (246)
T ss_dssp SCHHHHHHHHHTTTSEEEEEECTTCCS
T ss_pred hhHHHHHHHHHHcCCeEEEEecCCCCH
Confidence 357888999999999999999997654
No 351
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=21.01 E-value=2e+02 Score=25.84 Aligned_cols=57 Identities=14% Similarity=0.029 Sum_probs=41.2
Q ss_pred ccCCCHHHHHHHHHHHHHHHHCCCeEEEEe-cCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeeEEecCCCC
Q psy629 19 RDLYSVEEAEHLTGLISAAKEQGIDFYYAL-SPGLDITYSSGKEVATLKRKLEQVAQFGCRGFALLFDDIE 88 (166)
Q Consensus 19 re~Yp~~~l~~l~~L~~~a~~~~v~Fv~ai-sPG~~~~~s~~~d~~~L~~K~~ql~~lGvr~FailfDDi~ 88 (166)
-+++.++-+..++..+++|++.|+..+++= ++|. .. -...+..+|++.|++--|-|.
T Consensus 474 ~dp~~paVl~li~~vv~aa~~~g~~vgvCGe~agd------p~-------~~~~l~~lG~~~~S~~p~~v~ 531 (575)
T 2hwg_A 474 YQPMSPSVLNLIKQVIDASHAEGKWTGMCGELAGD------ER-------ATLLLLGMGLDEFSMSAISIP 531 (575)
T ss_dssp CCSSSHHHHHHHHHHHHHHHHTTCEEEECSTTTTC------TT-------THHHHHHTTCCEEEECGGGHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCCCCC------HH-------HHHHHHHCCCCEEEECccHHH
Confidence 456668889999999999999999864421 2221 11 135678999999998777665
No 352
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=20.83 E-value=1.4e+02 Score=24.02 Aligned_cols=45 Identities=18% Similarity=0.166 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHcCCC
Q psy629 26 EAEHLTGLISAAKEQGIDFYYALSPGLDITYSSGKEVATLKRKLEQVAQFGCR 78 (166)
Q Consensus 26 ~l~~l~~L~~~a~~~~v~Fv~aisPG~~~~~s~~~d~~~L~~K~~ql~~lGvr 78 (166)
-..+|++++..|+++|.-.++| || ..+-+++|.+-+.++.+-||.
T Consensus 196 I~~qL~~a~~~Ar~~G~AIaIG-hp-------~p~Ti~aL~~~~~~l~~~gi~ 240 (261)
T 2qv5_A 196 ILRKLDDLERIARRNGQAIGVA-SA-------FDESIAAISKWSREAGGRGIE 240 (261)
T ss_dssp HHHHHHHHHHHHHHHSEEEEEE-EC-------CHHHHHHHHHHHHHGGGGTEE
T ss_pred HHHHHHHHHHHHHhcCcEEEEe-CC-------CHHHHHHHHHHhhhhhhCCeE
Confidence 3579999999999999554444 55 356789999988888888864
No 353
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=20.36 E-value=3.4e+02 Score=21.81 Aligned_cols=65 Identities=12% Similarity=0.258 Sum_probs=45.1
Q ss_pred ccCCCHHHH-HHHHHHHHHHHHCCCeEEEEecCCCCC-CCCC-H-HHHHHHHHHHHHHHHcCCCeeEEecC
Q psy629 19 RDLYSVEEA-EHLTGLISAAKEQGIDFYYALSPGLDI-TYSS-G-KEVATLKRKLEQVAQFGCRGFALLFD 85 (166)
Q Consensus 19 re~Yp~~~l-~~l~~L~~~a~~~~v~Fv~aisPG~~~-~~s~-~-~d~~~L~~K~~ql~~lGvr~FailfD 85 (166)
++++|.+|+ +.++.++++++..|+.|++--.=-.-+ .... . +.++.++++...+.++|+. +|+..
T Consensus 120 k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd--~i~~e 188 (275)
T 2ze3_A 120 TELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAYADAGAD--GIFVP 188 (275)
T ss_dssp SCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCS--EEECT
T ss_pred CccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHHHHHCCCC--EEEEC
Confidence 478888876 689999999888899986654321100 0001 1 4689999999999999986 44443
No 354
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=20.35 E-value=2.3e+02 Score=23.32 Aligned_cols=48 Identities=15% Similarity=0.135 Sum_probs=27.3
Q ss_pred HHHHHHHHcCCCeeEEecCC--CCCCCCHHHHHHHhhHHHHHHHHHHHHH
Q psy629 67 RKLEQVAQFGCRGFALLFDD--IESEMSEADKEVFQSFAHAQVSVTNEVF 114 (166)
Q Consensus 67 ~K~~ql~~lGvr~FailfDD--i~~~~~~~d~~~f~~~a~aq~~l~n~v~ 114 (166)
..|+.+|++|||..++--.. .-+..+...-.....+|..-++.+|++-
T Consensus 103 ~~l~~~y~lGvR~~~Lt~n~~N~~~~g~~~~~~GLT~~G~~vV~emnrlG 152 (325)
T 2i5g_A 103 GYVEVFKQLGVGIVQMCYNTQNLVGTGCYERDGGLSGFGREIVAEMNRVG 152 (325)
T ss_dssp HHHHHHHHTTEEEEESCCSSBCSSCBBTTSCCCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCeEEEeeccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHcC
Confidence 48899999999999986311 1111111000122356666667777764
No 355
>2fcl_A Hypothetical protein TM1012; putative nucleotidyltransferase, structural genomics, joint for structural genomics, JCSG; HET: MLY; 1.20A {Thermotoga maritima} SCOP: d.218.1.11 PDB: 2ewr_A
Probab=20.23 E-value=91 Score=23.28 Aligned_cols=52 Identities=13% Similarity=0.209 Sum_probs=35.4
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEecC-----CC-----CCCC-CCHHHHHHHHHHHHHH
Q psy629 21 LYSVEEAEHLTGLISAAKEQGIDFYYALSP-----GL-----DITY-SSGKEVATLKRKLEQV 72 (166)
Q Consensus 21 ~Yp~~~l~~l~~L~~~a~~~~v~Fv~aisP-----G~-----~~~~-s~~~d~~~L~~K~~ql 72 (166)
--|++-...|+++++.-++.+|+|+.+=|= |. |+++ -+.++..++.+-|..+
T Consensus 13 ~~~~~~~~~L~~i~~~L~~~~V~~~l~Gs~Al~~~G~~~~~~DIDi~i~~~da~~~~~~L~~~ 75 (169)
T 2fcl_A 13 MIRPEYLRVLRXIYDRLXNEXVNWVVTGSLSFALQGVPVEVHDIDIQTDEEGAYEIERIFSEF 75 (169)
T ss_dssp CCCHHHHHHHHHHHHHHTTSSCCEEEEHHHHHHHTTCCCCCCSEEEEECHHHHHHHHHHTGGG
T ss_pred cccHHHHHHHHHHHHHHHhcCCCEEEeHHHHHHHcCCCCCCCccEEEecccCHHHHHHHHHHH
Confidence 457788899999999999999999987443 22 2221 1356666666555443
No 356
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=20.18 E-value=2.5e+02 Score=22.16 Aligned_cols=47 Identities=13% Similarity=0.169 Sum_probs=30.8
Q ss_pred HHHHHHHHHCCCeEEEEecCC----C-CCCCCCHHHHHHHHHHHHHHHHcCCCeeEE
Q psy629 31 TGLISAAKEQGIDFYYALSPG----L-DITYSSGKEVATLKRKLEQVAQFGCRGFAL 82 (166)
Q Consensus 31 ~~L~~~a~~~~v~Fv~aisPG----~-~~~~s~~~d~~~L~~K~~ql~~lGvr~Fai 82 (166)
.+++++|.+.|++++++=||- . .++.+.. ..+++..|.+-|+.-|+.
T Consensus 49 ~~vi~eAi~~gadlIitHHP~~f~~~~~~~~~~~-----~~~~i~~li~~~I~lya~ 100 (267)
T 2fyw_A 49 EETVAEAIEKGVDLIIVKHAPIFRPIKDLLASRP-----QNQIYIDLIKHDIAVYVS 100 (267)
T ss_dssp HHHHHHHHHTTCSEEEESSCSCCSCCCCCCTTSH-----HHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHCCCCEEEECCccccCCccccccCch-----HHHHHHHHHHCCCeEEEe
Confidence 578899999999999999992 2 2444331 245555555555555543
No 357
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=20.13 E-value=84 Score=25.18 Aligned_cols=25 Identities=8% Similarity=0.174 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEec
Q psy629 25 EEAEHLTGLISAAKEQGIDFYYALS 49 (166)
Q Consensus 25 ~~l~~l~~L~~~a~~~~v~Fv~ais 49 (166)
+.++.|.++++.|+++|+..+..+|
T Consensus 92 ~~~~~ld~~v~~a~~~Gi~vild~h 116 (358)
T 1ece_A 92 TSLQVMDKIVAYAGQIGLRIILDRH 116 (358)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHCCCEEEEecC
Confidence 3789999999999999999999998
No 358
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=20.01 E-value=2.9e+02 Score=20.97 Aligned_cols=56 Identities=16% Similarity=0.121 Sum_probs=33.4
Q ss_pred HHHHHHHHHCCCeEEEEecC--CCCC-CCCCHHHHHHHHHHHHHHH-HcCCCeeEEecCC
Q psy629 31 TGLISAAKEQGIDFYYALSP--GLDI-TYSSGKEVATLKRKLEQVA-QFGCRGFALLFDD 86 (166)
Q Consensus 31 ~~L~~~a~~~~v~Fv~aisP--G~~~-~~s~~~d~~~L~~K~~ql~-~lGvr~FailfDD 86 (166)
.++++.+++.||.+|.-=++ +.++ .+-.....+.-..=.+.|. +.|.+.++++-.+
T Consensus 73 ~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~~G~~~i~~i~g~ 132 (313)
T 3m9w_A 73 SNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGS 132 (313)
T ss_dssp HHHHHHHHTTTCEEEEESSCCTTSCCSEEEEECHHHHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred HHHHHHHHHCCCeEEEECCcCCCCCceEEEecCHHHHHHHHHHHHHHhCCCCcEEEEECC
Confidence 35667778889888776554 2222 1111122344444455677 7999999988654
Done!