BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6291
(79 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|270009657|gb|EFA06105.1| hypothetical protein TcasGA2_TC008947 [Tribolium castaneum]
Length = 539
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 59/78 (75%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
L++KKAV + +L + M RLH+F D+ VP DL+KNVS+QIRQLRP+P+ L Y+++
Sbjct: 462 LILKKAVYKSMAGNLQRRHTMERLHLFADENVPADLMKNVSNQIRQLRPMPKRLDHYTEE 521
Query: 62 EVDEFPKINDFPKDYILK 79
EV FPK+ D+PKDYILK
Sbjct: 522 EVKSFPKLIDYPKDYILK 539
>gi|91086957|ref|XP_973003.1| PREDICTED: similar to 39S ribosomal protein L13 [Tribolium
castaneum]
Length = 178
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 59/78 (75%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
L++KKAV + +L + M RLH+F D+ VP DL+KNVS+QIRQLRP+P+ L Y+++
Sbjct: 101 LILKKAVYKSMAGNLQRRHTMERLHLFADENVPADLMKNVSNQIRQLRPMPKRLDHYTEE 160
Query: 62 EVDEFPKINDFPKDYILK 79
EV FPK+ D+PKDYILK
Sbjct: 161 EVKSFPKLIDYPKDYILK 178
>gi|346469835|gb|AEO34762.1| hypothetical protein [Amblyomma maculatum]
Length = 181
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 58/77 (75%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
V+ KAV LP L + MARLH+FPD +VP D+++N+S Q+RQLRPVP+ L YS++E
Sbjct: 105 VLWKAVYRALPGDLRRRPRMARLHLFPDDQVPYDIMQNISGQLRQLRPVPKKLTEYSEEE 164
Query: 63 VDEFPKINDFPKDYILK 79
+ EFPK+ D+P DY+++
Sbjct: 165 LSEFPKVFDYPDDYVIR 181
>gi|332375993|gb|AEE63137.1| unknown [Dendroctonus ponderosae]
Length = 178
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
++M+KAV + +L + M RLHIFPD VP +LL NVS+QIRQ+RPVP+ L YS++
Sbjct: 101 MIMRKAVYNGMDGNLQRRYTMQRLHIFPDANVPNELLGNVSNQIRQIRPVPKRLDHYSEE 160
Query: 62 EVDEFPKINDFPKDYILK 79
EV PK+ D+PKDY+++
Sbjct: 161 EVQTAPKVIDYPKDYVVR 178
>gi|242015600|ref|XP_002428441.1| mitochondrial 50S ribosomal protein L13, putative [Pediculus
humanus corporis]
gi|212513053|gb|EEB15703.1| mitochondrial 50S ribosomal protein L13, putative [Pediculus
humanus corporis]
Length = 177
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 60/78 (76%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
++MKKAV L ++L + M RLH++ +++VP+++L+NVSSQI QLR VPR L SYS+K
Sbjct: 100 MIMKKAVYSSLDKNLQRRHTMERLHLYDEEKVPKEILENVSSQIEQLRIVPRKLKSYSEK 159
Query: 62 EVDEFPKINDFPKDYILK 79
E++EFPK+ ++ DY+ K
Sbjct: 160 EIEEFPKLANYSTDYVRK 177
>gi|332026320|gb|EGI66454.1| 39S ribosomal protein L13, mitochondrial [Acromyrmex echinatior]
Length = 178
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 59/78 (75%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
L+++KAV LP++L++ M RLHIFPD+++PED+LKN+S+QI+QLR VP L
Sbjct: 101 LIVEKAVYRALPKNLLRRHTMQRLHIFPDEKIPEDMLKNISNQIKQLRTVPVQLNRIPQT 160
Query: 62 EVDEFPKINDFPKDYILK 79
EV+ FP++ +P++YILK
Sbjct: 161 EVNNFPQLLRYPENYILK 178
>gi|307168987|gb|EFN61866.1| 39S ribosomal protein L13, mitochondrial [Camponotus floridanus]
Length = 178
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 59/78 (75%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
L+++KAV LP++L + M RLHIFP+ ++P+D+L+N+S+QI+QLRPVP L +
Sbjct: 101 LIVEKAVYSALPKNLQRRHTMQRLHIFPNNKIPKDILENISNQIKQLRPVPVRLDHIPKE 160
Query: 62 EVDEFPKINDFPKDYILK 79
EVD FP++ +PKDY+L+
Sbjct: 161 EVDNFPQLLKYPKDYVLR 178
>gi|241161087|ref|XP_002408852.1| ribosomal protein L13, putative [Ixodes scapularis]
gi|215494416|gb|EEC04057.1| ribosomal protein L13, putative [Ixodes scapularis]
Length = 181
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 54/76 (71%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
V+ KAV P L + MARLH+FPD +P+++ +N+S Q+RQLRPVPR LA SD+E
Sbjct: 105 VLWKAVYRACPGDLRRKTKMARLHLFPDDRLPDEVARNISGQLRQLRPVPRKLAELSDQE 164
Query: 63 VDEFPKINDFPKDYIL 78
FPK+ D+P+DYI+
Sbjct: 165 RHSFPKLFDYPEDYIV 180
>gi|322784728|gb|EFZ11555.1| hypothetical protein SINV_12607 [Solenopsis invicta]
Length = 128
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 59/78 (75%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
L+++KAV LP++L + M RLHIFPD+++PED+LKN++++I+QLR +P L K
Sbjct: 51 LIVEKAVYRALPKNLQRRYTMQRLHIFPDEKIPEDILKNITNEIKQLRTIPVRLDHIPQK 110
Query: 62 EVDEFPKINDFPKDYILK 79
EVD FP++ +PK+YIL+
Sbjct: 111 EVDNFPQLLKYPKNYILE 128
>gi|442759265|gb|JAA71791.1| Putative ribosomal protein l13 [Ixodes ricinus]
Length = 181
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 53/76 (69%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
V+ KAV P L + MARLH+FPD +P+ + +N+S Q+RQLRPVPR LA SD+E
Sbjct: 105 VLWKAVYRACPGDLRRKTKMARLHLFPDDRLPDQVARNISGQLRQLRPVPRKLAELSDQE 164
Query: 63 VDEFPKINDFPKDYIL 78
FPK+ D+P+DYI+
Sbjct: 165 RHSFPKLFDYPEDYIV 180
>gi|318086988|gb|ADV40086.1| putative ribosomal protein L13 [Latrodectus hesperus]
Length = 183
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
VM KAV SL++ M RLH+FPD +PE++ N+SSQI+QLRPVP+ L Y+ +E
Sbjct: 107 VMWKAVYKACGPSLLRHTRMQRLHLFPDANIPEEIKVNISSQIKQLRPVPKRLKEYTQEE 166
Query: 63 VDEFPKINDFPKDYI 77
+DEFPK+ ++P DY
Sbjct: 167 LDEFPKLFEWPDDYC 181
>gi|427786975|gb|JAA58939.1| Putative mitochondrial ribosomal protein l13 [Rhipicephalus
pulchellus]
Length = 181
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 55/77 (71%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
V+ KAV LP L + MARLH+FPD +VP ++++N+S Q+RQLR P+ L YS++E
Sbjct: 105 VLWKAVYRALPGDLNRRTRMARLHLFPDDKVPREIMENISGQLRQLRRAPKKLVEYSEEE 164
Query: 63 VDEFPKINDFPKDYILK 79
+FPK+ D+P DYI++
Sbjct: 165 QAKFPKVFDYPDDYIIQ 181
>gi|443710303|gb|ELU04557.1| hypothetical protein CAPTEDRAFT_159961 [Capitella teleta]
Length = 187
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 58/78 (74%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
+VMKK V + +L + M RLH+FP++E+PED+L+NVSSQI+Q+ PVP+ L +S +
Sbjct: 100 MVMKKFVYSSMKGTLFRRLCMQRLHLFPEEELPEDILRNVSSQIQQVMPVPKRLDEFSAE 159
Query: 62 EVDEFPKINDFPKDYILK 79
E FP++ ++PKDYI++
Sbjct: 160 ERKAFPQLFEWPKDYIME 177
>gi|260908407|gb|ACX53924.1| ribosomal protein L13 [Rhipicephalus sanguineus]
Length = 181
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 54/77 (70%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
V+ KAV LP L + MARLH+F D +VP ++++N+S Q+RQLR P+ L YSD+E
Sbjct: 105 VLWKAVYRALPGDLNRRTRMARLHLFTDDKVPREVMENISGQLRQLRRAPKKLVEYSDEE 164
Query: 63 VDEFPKINDFPKDYILK 79
+FPK+ D+P DYI+K
Sbjct: 165 QAKFPKVFDYPDDYIIK 181
>gi|240849099|ref|NP_001155700.1| 39S ribosomal protein L13-like [Acyrthosiphon pisum]
gi|239789841|dbj|BAH71519.1| ACYPI007195 [Acyrthosiphon pisum]
Length = 180
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 59/77 (76%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
++ +KAV + +L + +M RLHIF D VPE++++N+++QI LR +P+TL+SYS +
Sbjct: 101 MIFRKAVYHHMKGNLFRRVVMERLHIFSDSNVPEEVMENITNQIPPLRSIPKTLSSYSKE 160
Query: 62 EVDEFPKINDFPKDYIL 78
E++++PKI D+P+D+IL
Sbjct: 161 EIEKYPKIIDYPEDFIL 177
>gi|357601978|gb|EHJ63221.1| hypothetical protein KGM_16444 [Danaus plexippus]
Length = 178
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 56/78 (71%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
+++KKAV + +L + M RL I+PD+EVPED+L+NV++QIRQLR VP L +
Sbjct: 101 MIIKKAVYRSMKGNLQRRHTMERLLIYPDEEVPEDVLQNVTNQIRQLRLVPTRLDHIPED 160
Query: 62 EVDEFPKINDFPKDYILK 79
EV +FPK+ D+PKDY+ K
Sbjct: 161 EVRKFPKVMDYPKDYVYK 178
>gi|307205179|gb|EFN83603.1| 39S ribosomal protein L13, mitochondrial [Harpegnathos saltator]
Length = 177
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
L+++KAV LP++L + M RLHIFPD +VPED+LKNVS+QI+QLR VP L +
Sbjct: 100 LIVEKAVYSALPKNLQRRYTMQRLHIFPDDKVPEDVLKNVSNQIKQLRHVPIRLDHIPKE 159
Query: 62 EVDEFPKINDFPKDYILK 79
E D FP+I P+ YILK
Sbjct: 160 ERDSFPQIISHPEQYILK 177
>gi|48142734|ref|XP_397367.1| PREDICTED: 39S ribosomal protein L13, mitochondrial [Apis
mellifera]
Length = 178
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
L+ KKA+ + +L + M RLHIFPD+ VPED+L+NVS+QI+QLRPVP L S +
Sbjct: 101 LIFKKAIYSAMDGNLQRRYTMERLHIFPDENVPEDMLQNVSNQIKQLRPVPVKLCDISQE 160
Query: 62 EVDEFPKINDFPKDYILK 79
E D+ P++ +P DY LK
Sbjct: 161 ERDKIPRLIKYPIDYQLK 178
>gi|229367396|gb|ACQ58678.1| 39S ribosomal protein L13, mitochondrial [Anoplopoma fimbria]
Length = 179
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 57/77 (74%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K AV LPR+L++ +M RLHIFPD E+P+D+L N++ ++ Q R +PRTL+ Y+ +E
Sbjct: 103 IVKLAVYGMLPRNLLRRTMMQRLHIFPDDELPDDILANLTEELPQPRQIPRTLSEYTQEE 162
Query: 63 VDEFPKINDFPKDYILK 79
+D FP++ P+DY +K
Sbjct: 163 MDAFPRLWTPPEDYKMK 179
>gi|380014791|ref|XP_003691401.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like [Apis
florea]
Length = 178
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 55/78 (70%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
L++KKA+ + +L + M RLHIFPD+ VP+D+L+NVS+QI+QLRP+P L S +
Sbjct: 101 LIIKKAIYTAMDGTLQRRYTMERLHIFPDENVPKDMLQNVSNQIKQLRPIPVKLCDISQE 160
Query: 62 EVDEFPKINDFPKDYILK 79
E D+ P++ +P DY LK
Sbjct: 161 ERDKIPRLIKYPIDYQLK 178
>gi|194766467|ref|XP_001965346.1| GF20676 [Drosophila ananassae]
gi|190617956|gb|EDV33480.1| GF20676 [Drosophila ananassae]
Length = 178
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
+VMKKAV + +L + M RLH+F D +VPED+++NV++QIR R VP+ L +
Sbjct: 101 MVMKKAVYNSMRGNLQRRHTMQRLHLFADDQVPEDIIQNVTNQIRTPRTVPQRLDHIDKE 160
Query: 62 EVDEFPKINDFPKDYILK 79
++ FPKI D+PKDYIL+
Sbjct: 161 TLENFPKIMDYPKDYILR 178
>gi|195386468|ref|XP_002051926.1| GJ24452 [Drosophila virilis]
gi|194148383|gb|EDW64081.1| GJ24452 [Drosophila virilis]
Length = 178
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
+VMKKAV + +L + M RLH+F D +VPEDLL NV++QIR R VP+ L +
Sbjct: 101 MVMKKAVYNSMTGNLQRRHTMQRLHLFADDKVPEDLLANVTNQIRTPRTVPQRLDHIDKE 160
Query: 62 EVDEFPKINDFPKDYILK 79
++ FP I D+PKDY+L+
Sbjct: 161 TLENFPAIMDYPKDYVLR 178
>gi|289743369|gb|ADD20432.1| mitochondrial ribosomal protein L13 [Glossina morsitans morsitans]
Length = 178
Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
+VMKKAV + +L + M RLH++ D +VPED+L NVS QI+ LR VP+ L +
Sbjct: 101 MVMKKAVYRSMKGNLQRRYTMQRLHLYADDKVPEDILANVSHQIKPLRQVPQRLDHIDKE 160
Query: 62 EVDEFPKINDFPKDYILK 79
VD FPKI D+P+DYI++
Sbjct: 161 IVDNFPKIMDYPEDYIIR 178
>gi|158298887|ref|XP_319028.4| AGAP009908-PA [Anopheles gambiae str. PEST]
gi|157014102|gb|EAA14080.4| AGAP009908-PA [Anopheles gambiae str. PEST]
Length = 177
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
++MKKAV + +L + M RLH+F D EVP+D+L+NV++QIRQ R VP+ L +
Sbjct: 100 MIMKKAVYRAMKGNLQRRHTMQRLHLFKDAEVPKDILENVTNQIRQPRRVPQRLDHIDPE 159
Query: 62 EVDEFPKINDFPKDYILK 79
V FPK+ D+PKDYIL+
Sbjct: 160 VVRNFPKVMDYPKDYILR 177
>gi|195035227|ref|XP_001989079.1| GH11523 [Drosophila grimshawi]
gi|193905079|gb|EDW03946.1| GH11523 [Drosophila grimshawi]
Length = 178
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
+VMKKAV + +L + M RLH+F D +VP+D+L NV++QIR R VP+ L +
Sbjct: 101 MVMKKAVYNSMAGNLQRRHTMQRLHLFHDDQVPQDILANVTNQIRTPRTVPQRLDHIDKE 160
Query: 62 EVDEFPKINDFPKDYILK 79
++ FP I D+PKDY+L+
Sbjct: 161 TLENFPAIMDYPKDYVLR 178
>gi|426256850|ref|XP_004022050.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like [Ovis
aries]
Length = 178
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 55/76 (72%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + LM RLH+FPD+++PED+LKN++ ++ Q R VPR L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTLMQRLHLFPDEDIPEDILKNLTEELPQPRKVPRRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
++ FP++ PKDY L
Sbjct: 163 IEAFPRLWSPPKDYRL 178
>gi|290561136|gb|ADD37970.1| 39S ribosomal protein L13, mitochondrial [Lepeophtheirus salmonis]
Length = 189
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
LV+ KA L L + MARLH+FPD+EVP++LL NVS I +++ P+ L+ YS +
Sbjct: 106 LVLWKACYNNLYGDLTRKGKMARLHVFPDEEVPDELLNNVSGMIPRIKDAPKKLSEYSAE 165
Query: 62 EVDEFPKINDFPKDYI 77
E+ FP + D+PKD++
Sbjct: 166 EIQAFPSLWDYPKDFV 181
>gi|24585068|ref|NP_523598.2| mitochondrial ribosomal protein L13 [Drosophila melanogaster]
gi|31340372|sp|Q9VJ38.2|RM13_DROME RecName: Full=39S ribosomal protein L13, mitochondrial;
Short=L13mt; Short=MRP-L13
gi|22946784|gb|AAF53719.2| mitochondrial ribosomal protein L13 [Drosophila melanogaster]
gi|218505925|gb|ACK77619.1| GM19213p [Drosophila melanogaster]
Length = 178
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 53/78 (67%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
+VMKKAV + +L + M RLH+F D +VPE++L+NV++QIR R +P+ L +
Sbjct: 101 MVMKKAVYNSMRGNLQRRHTMQRLHLFADDQVPEEILQNVTNQIRTPRSIPQRLDHIDKE 160
Query: 62 EVDEFPKINDFPKDYILK 79
++ FP I D+PKDYIL+
Sbjct: 161 TLENFPNIMDYPKDYILR 178
>gi|194879946|ref|XP_001974334.1| GG21677 [Drosophila erecta]
gi|195484273|ref|XP_002090624.1| GE12697 [Drosophila yakuba]
gi|190657521|gb|EDV54734.1| GG21677 [Drosophila erecta]
gi|194176725|gb|EDW90336.1| GE12697 [Drosophila yakuba]
Length = 178
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 53/78 (67%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
+VMKKAV + +L + M RLH+F D +VPE++L+NV++QIR R +P+ L +
Sbjct: 101 MVMKKAVYNSMRGNLQRRHTMQRLHLFADDQVPEEILQNVTNQIRTPRSIPQRLDHIDKE 160
Query: 62 EVDEFPKINDFPKDYILK 79
++ FP I D+PKDYIL+
Sbjct: 161 TLENFPNIMDYPKDYILR 178
>gi|195344934|ref|XP_002039031.1| GM17054 [Drosophila sechellia]
gi|195579998|ref|XP_002079843.1| GD21802 [Drosophila simulans]
gi|194134161|gb|EDW55677.1| GM17054 [Drosophila sechellia]
gi|194191852|gb|EDX05428.1| GD21802 [Drosophila simulans]
Length = 178
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 53/78 (67%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
+VMKKAV + +L + M RLH+F D +VPE++L+NV++QIR R +P+ L +
Sbjct: 101 MVMKKAVYNSMRGNLQRRHTMQRLHLFADDQVPEEILQNVTNQIRTPRSIPQRLDHIDKE 160
Query: 62 EVDEFPKINDFPKDYILK 79
++ FP I D+PKDYIL+
Sbjct: 161 TLENFPNIMDYPKDYILR 178
>gi|195433048|ref|XP_002064527.1| GK23896 [Drosophila willistoni]
gi|194160612|gb|EDW75513.1| GK23896 [Drosophila willistoni]
Length = 178
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
LVMKKAV + +L + M RLH+F D VPE +L+NV++QIR R VP+ L +
Sbjct: 101 LVMKKAVYNSMQGNLQRRHTMQRLHLFADDAVPEKILENVTNQIRAPRTVPQRLDHIDKE 160
Query: 62 EVDEFPKINDFPKDYILK 79
++ FP+I D+PKDYIL+
Sbjct: 161 TLENFPQIMDYPKDYILR 178
>gi|356577831|ref|XP_003557025.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like [Glycine
max]
Length = 178
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
LVMKKAV + +L + M RLH++ D +VP+D+L NV++QIR R VP+ L +
Sbjct: 101 LVMKKAVYNSMKGNLQRRHTMQRLHLYADDQVPKDILANVTNQIRTPRTVPQRLDHIDKE 160
Query: 62 EVDEFPKINDFPKDYILK 79
++ FP I D+PKDYIL+
Sbjct: 161 TLENFPTIMDYPKDYILR 178
>gi|77736592|ref|NP_001029977.1| 39S ribosomal protein L13, mitochondrial [Bos taurus]
gi|91207746|sp|Q3SYS1.1|RM13_BOVIN RecName: Full=39S ribosomal protein L13, mitochondrial;
Short=L13mt; Short=MRP-L13
gi|74268205|gb|AAI03424.1| Mitochondrial ribosomal protein L13 [Bos taurus]
gi|296480430|tpg|DAA22545.1| TPA: 39S ribosomal protein L13, mitochondrial [Bos taurus]
Length = 178
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 55/76 (72%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + LM RLH+FPD+++PED+LKN++ ++ Q R VPR L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTLMQRLHLFPDEDIPEDILKNLTEELPQPRKVPRRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
++ FP++ P+DY L
Sbjct: 163 IEAFPRVWSPPEDYRL 178
>gi|395512327|ref|XP_003760392.1| PREDICTED: 39S ribosomal protein L13, mitochondrial [Sarcophilus
harrisii]
Length = 178
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 54/74 (72%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+E+PED+LKN+ ++ Q R +P+ L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMQRLHLFPDEEIPEDILKNIVEELPQPRKIPKRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDY 76
+D FP++ + P+D+
Sbjct: 163 IDAFPRLWNLPEDF 176
>gi|426235905|ref|XP_004011918.1| PREDICTED: 39S ribosomal protein L13, mitochondrial [Ovis aries]
Length = 178
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 55/76 (72%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + LM RLH+FPD+++PED+LKN++ ++ Q R VPR L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTLMKRLHLFPDEDIPEDILKNLTEELPQPRKVPRRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
++ FP++ P+DY L
Sbjct: 163 IEAFPRVWSPPEDYRL 178
>gi|195114384|ref|XP_002001747.1| GI17018 [Drosophila mojavensis]
gi|193912322|gb|EDW11189.1| GI17018 [Drosophila mojavensis]
Length = 178
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
+VMKKAV + +L + M RLH+F D +VPE++L NV++QIR R VP+ L +
Sbjct: 101 MVMKKAVYNSMRGNLQRRHTMQRLHLFADDQVPEEILTNVTNQIRTPRTVPQRLDHIDKE 160
Query: 62 EVDEFPKINDFPKDYILK 79
++ FP I D+PKDY+L+
Sbjct: 161 TLENFPAIVDYPKDYVLR 178
>gi|66472680|ref|NP_001018370.1| 39S ribosomal protein L13, mitochondrial [Danio rerio]
gi|63102346|gb|AAH95074.1| Mitochondrial ribosomal protein L13 [Danio rerio]
Length = 179
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 54/77 (70%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K AV LPR+L + +M RLH+FPD +PED+LKN++ ++ Q R +PR L+ Y+ +E
Sbjct: 103 IIKLAVYGMLPRNLTRRTMMQRLHLFPDDVLPEDILKNLTEELPQPREIPRKLSEYTQEE 162
Query: 63 VDEFPKINDFPKDYILK 79
D FP++ P+DY +K
Sbjct: 163 RDAFPRLWTPPEDYRMK 179
>gi|405974546|gb|EKC39181.1| 39S ribosomal protein L13, mitochondrial [Crassostrea gigas]
Length = 193
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 57/78 (73%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
++++KAV +P L++ + M RLHI+PD+EVP +++ NV QI+Q++ VP+ L Y+ +
Sbjct: 100 MMIEKAVYSNMPGFLLRRKYMRRLHIYPDEEVPPEIIGNVCDQIQQVQKVPKRLDEYTAE 159
Query: 62 EVDEFPKINDFPKDYILK 79
E+ FPK+ D+ ++Y+++
Sbjct: 160 EIQAFPKLFDWSEEYVIE 177
>gi|170050843|ref|XP_001861494.1| 39S ribosomal protein L13 [Culex quinquefasciatus]
gi|167872296|gb|EDS35679.1| 39S ribosomal protein L13 [Culex quinquefasciatus]
Length = 178
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
++MKKAV + +L + M RLH+F D VP+++L+NVS+QIRQ R VP+ L +
Sbjct: 101 MIMKKAVYRSMHGNLQRRYTMQRLHLFKDDNVPKEILENVSNQIRQPRRVPQRLDQLDPE 160
Query: 62 EVDEFPKINDFPKDYILK 79
V FPKI D+PKDY+L+
Sbjct: 161 LVKNFPKIMDYPKDYVLR 178
>gi|291388473|ref|XP_002710800.1| PREDICTED: mitochondrial ribosomal protein L13 [Oryctolagus
cuniculus]
Length = 178
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 53/76 (69%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+ +PED+LKN+ +I Q R VP+ L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMQRLHLFPDENIPEDILKNLVEEIPQPRKVPKRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
V+ FP+I P+DY L
Sbjct: 163 VEAFPRIWSPPEDYRL 178
>gi|194215069|ref|XP_001496779.2| PREDICTED: 39S ribosomal protein L13, mitochondrial-like [Equus
caballus]
Length = 178
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 54/76 (71%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R VPR L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELPQPRKVPRRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
++ FP++ P+DY L
Sbjct: 163 IEAFPRVWSPPEDYRL 178
>gi|343432660|ref|NP_001230344.1| 39S ribosomal protein L13, mitochondrial [Sus scrofa]
Length = 178
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 54/76 (71%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R VPR L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELPQPRKVPRRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
++ FP++ P+DY L
Sbjct: 163 IEAFPRVWSPPEDYRL 178
>gi|380797571|gb|AFE70661.1| 39S ribosomal protein L13, mitochondrial, partial [Macaca mulatta]
Length = 152
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 54/76 (71%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R +P+ L Y+ +E
Sbjct: 77 IVKLAIYGMLPKNLHRRTMMERLHLFPDEDIPEDILKNLVEELPQPRKIPKRLDEYTQEE 136
Query: 63 VDEFPKINDFPKDYIL 78
+D FP++ P+DY L
Sbjct: 137 IDAFPRVWTPPEDYRL 152
>gi|225709584|gb|ACO10638.1| 39S ribosomal protein L13, mitochondrial [Caligus rogercresseyi]
Length = 207
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 51/76 (67%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
LV+ KA L L + MARLH+FPD+EVPE+LL N S+ I +++ VP+ L+ YS++
Sbjct: 106 LVLWKACYSNLYGDLFRKGKMARLHVFPDEEVPEELLSNASNMIPRIKDVPKKLSEYSEE 165
Query: 62 EVDEFPKINDFPKDYI 77
E+ FP++ F + Y+
Sbjct: 166 EIKAFPRLWGFQETYV 181
>gi|291223225|ref|XP_002731608.1| PREDICTED: mitochondrial ribosomal protein L13-like [Saccoglossus
kowalevskii]
Length = 177
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
V+ KA+ LP+ L++ +M RLH++PD ++PED+L N+S QI R +PR L YS +E
Sbjct: 101 VVHKAIYGMLPKVLLRRTMMERLHLYPDNKIPEDILANISEQITPPRIIPRKLTEYSQEE 160
Query: 63 VDEFPKI 69
+D FPK+
Sbjct: 161 LDNFPKL 167
>gi|384475732|ref|NP_001245012.1| 39S ribosomal protein L13, mitochondrial [Macaca mulatta]
gi|402879041|ref|XP_003903164.1| PREDICTED: 39S ribosomal protein L13, mitochondrial [Papio anubis]
gi|355698190|gb|EHH28738.1| 39S ribosomal protein L13, mitochondrial [Macaca mulatta]
gi|355779919|gb|EHH64395.1| 39S ribosomal protein L13, mitochondrial [Macaca fascicularis]
gi|383417733|gb|AFH32080.1| 39S ribosomal protein L13, mitochondrial [Macaca mulatta]
gi|384946610|gb|AFI36910.1| 39S ribosomal protein L13, mitochondrial [Macaca mulatta]
Length = 178
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 54/76 (71%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R +P+ L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMERLHLFPDEDIPEDILKNLVEELPQPRKIPKRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
+D FP++ P+DY L
Sbjct: 163 IDAFPRVWTPPEDYRL 178
>gi|125985459|ref|XP_001356493.1| GA10432 [Drosophila pseudoobscura pseudoobscura]
gi|195147412|ref|XP_002014674.1| GL18826 [Drosophila persimilis]
gi|54644817|gb|EAL33557.1| GA10432 [Drosophila pseudoobscura pseudoobscura]
gi|194106627|gb|EDW28670.1| GL18826 [Drosophila persimilis]
Length = 178
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
+VMKKAV + +L + M RLH+F VP+++L+NV++QIR R VP+ L +
Sbjct: 101 MVMKKAVYNSMHGNLQRRHTMQRLHLFSGDSVPDEILQNVTNQIRTPRTVPQRLDHIDKE 160
Query: 62 EVDEFPKINDFPKDYILK 79
++ FP I D+PKDYIL+
Sbjct: 161 TLENFPTIMDYPKDYILR 178
>gi|90080830|dbj|BAE89896.1| unnamed protein product [Macaca fascicularis]
Length = 178
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 54/76 (71%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R +P+ L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMERLHLFPDEDIPEDILKNLVEELPQPRKIPKRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
+D FP++ P+DY L
Sbjct: 163 IDAFPRVWTPPEDYRL 178
>gi|395817995|ref|XP_003782424.1| PREDICTED: 39S ribosomal protein L13, mitochondrial isoform 1
[Otolemur garnettii]
gi|395817997|ref|XP_003782425.1| PREDICTED: 39S ribosomal protein L13, mitochondrial isoform 2
[Otolemur garnettii]
Length = 178
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 53/76 (69%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+ +PED+LKN+ ++ Q R +P+ L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMQRLHLFPDENIPEDILKNLVEELPQPRKIPKRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
+D FP++ P+DY L
Sbjct: 163 IDAFPRVWSPPEDYRL 178
>gi|288683591|ref|NP_001016796.2| mitochondrial ribosomal protein L13 [Xenopus (Silurana) tropicalis]
Length = 179
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
+MK AV LP++L + +M RLH+FP+ ++PE+++KN+ ++I Q R VPR L +S +E
Sbjct: 103 IMKLAVYGMLPKNLHRRTMMQRLHLFPEDDIPEEIMKNLFAEIPQPRKVPRRLDEFSGEE 162
Query: 63 VDEFPKINDFPKDYILK 79
++ FPK+ P D+I+K
Sbjct: 163 INAFPKLWIPPPDFIMK 179
>gi|114621492|ref|XP_519928.2| PREDICTED: 39S ribosomal protein L13, mitochondrial isoform 3 [Pan
troglodytes]
gi|332214179|ref|XP_003256208.1| PREDICTED: 39S ribosomal protein L13, mitochondrial isoform 1
[Nomascus leucogenys]
gi|397499619|ref|XP_003820542.1| PREDICTED: 39S ribosomal protein L13, mitochondrial isoform 1 [Pan
paniscus]
gi|397499621|ref|XP_003820543.1| PREDICTED: 39S ribosomal protein L13, mitochondrial isoform 2 [Pan
paniscus]
gi|410042165|ref|XP_003951387.1| PREDICTED: 39S ribosomal protein L13, mitochondrial [Pan
troglodytes]
gi|441648025|ref|XP_004090849.1| PREDICTED: 39S ribosomal protein L13, mitochondrial isoform 2
[Nomascus leucogenys]
gi|410209276|gb|JAA01857.1| mitochondrial ribosomal protein L13 [Pan troglodytes]
gi|410247484|gb|JAA11709.1| mitochondrial ribosomal protein L13 [Pan troglodytes]
gi|410287624|gb|JAA22412.1| mitochondrial ribosomal protein L13 [Pan troglodytes]
gi|410338811|gb|JAA38352.1| mitochondrial ribosomal protein L13 [Pan troglodytes]
Length = 178
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 54/76 (71%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R +P+ L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMERLHLFPDEDIPEDILKNLVEELPQPRKIPKRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
+D FP++ P+DY L
Sbjct: 163 IDAFPRLWTPPEDYRL 178
>gi|225718160|gb|ACO14926.1| 39S ribosomal protein L13, mitochondrial [Caligus clemensi]
Length = 193
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
LV+ KAV L + + MARLH+FPD++VP +L++NV++ I +++ VP+ L+ YS
Sbjct: 106 LVLWKAVYNNLHGDITRKGKMARLHVFPDEDVPSELMENVTNMIPRIKDVPKQLSEYSQD 165
Query: 62 EVDEFPKIND----FPKD 75
E+D FPK+ D FPKD
Sbjct: 166 EIDAFPKLWDYKSHFPKD 183
>gi|157137689|ref|XP_001657133.1| 39S ribosomal protein L13, mitochondrial [Aedes aegypti]
gi|108880790|gb|EAT45015.1| AAEL003704-PA [Aedes aegypti]
Length = 178
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
+MKKA+ + +L + M RLH+F D VP+++L+N+++QIRQ R VP L
Sbjct: 102 IMKKAIYRSMHGNLQRRHTMQRLHLFKDDNVPQEILENITNQIRQPRRVPERLDQMDPDL 161
Query: 63 VDEFPKINDFPKDYILK 79
V FPKI D+PKDY+L+
Sbjct: 162 VKNFPKIMDYPKDYVLR 178
>gi|348588943|ref|XP_003480224.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like [Cavia
porcellus]
Length = 178
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 53/76 (69%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K AV LP++L + +M RLH+FPD++VPE+LL+N+ ++ Q R VPR L Y+ +E
Sbjct: 103 IVKLAVYGMLPKNLHRRTMMQRLHLFPDEDVPEELLRNLVEELPQPRKVPRRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
V FP++ P+DY L
Sbjct: 163 VAAFPRVWSPPEDYRL 178
>gi|358337456|dbj|GAA55816.1| large subunit ribosomal protein L13 [Clonorchis sinensis]
Length = 192
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPD--QEVPEDLLKNVSSQIRQLRPVPRTLASYSD 60
V+++ VR L K +ARLH++PD + +PED+ N+S IR++ PVP+ L YS
Sbjct: 103 VLRREVRVHLSTPASKLYALARLHLYPDGVETIPEDIFGNISGVIRRVMPVPKRLDQYSQ 162
Query: 61 KEVDEFPKINDFPKDY 76
+E+ EFPK+ D+P+D+
Sbjct: 163 EELQEFPKLFDWPQDF 178
>gi|403283482|ref|XP_003933149.1| PREDICTED: 39S ribosomal protein L13, mitochondrial [Saimiri
boliviensis boliviensis]
Length = 178
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 55/76 (72%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ +LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R +P+ L Y+ +E
Sbjct: 103 IVKLAIYGKLPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELPQPRKIPKRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
+D FP++ P+D+ L
Sbjct: 163 IDAFPRLWTPPEDFRL 178
>gi|225708054|gb|ACO09873.1| 39S ribosomal protein L13, mitochondrial [Osmerus mordax]
Length = 179
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K AV LP++L + +M RLH+F + E+PED+L N++ ++ Q R +PR L YS +
Sbjct: 103 IVKLAVYGMLPKNLARRTMMQRLHLFSEDELPEDILANLTEELPQPREIPRKLNEYSQEG 162
Query: 63 VDEFPKINDFPKDYILK 79
+D FP++ PKDY +K
Sbjct: 163 IDAFPRLWTPPKDYRMK 179
>gi|119612411|gb|EAW92005.1| mitochondrial ribosomal protein L13, isoform CRA_c [Homo sapiens]
Length = 154
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 53/76 (69%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+ +PED+LKN+ ++ Q R +P+ L Y+ +E
Sbjct: 79 IVKLAIYGMLPKNLHRRTMMERLHLFPDEYIPEDILKNLVEELPQPRKIPKRLDEYTQEE 138
Query: 63 VDEFPKINDFPKDYIL 78
+D FP++ P+DY L
Sbjct: 139 IDAFPRLWTPPEDYRL 154
>gi|432094707|gb|ELK26187.1| 39S ribosomal protein L13, mitochondrial, partial [Myotis davidii]
Length = 170
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 54/76 (71%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R VP+ L Y+ +E
Sbjct: 95 IVKLAIYGMLPKNLHRRTMMERLHLFPDEDIPEDILKNLVEELPQPRKVPKRLDEYTQEE 154
Query: 63 VDEFPKINDFPKDYIL 78
++ FP++ P+DY L
Sbjct: 155 IEAFPRLWTPPEDYRL 170
>gi|126322634|ref|XP_001381052.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like
[Monodelphis domestica]
Length = 172
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 49/67 (73%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+E+PED+LKN+ ++ Q R +PR L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMQRLHLFPDEEIPEDILKNLVEELPQPRKIPRRLDEYTQEE 162
Query: 63 VDEFPKI 69
+D FPK+
Sbjct: 163 IDAFPKL 169
>gi|14165270|ref|NP_054797.2| 39S ribosomal protein L13, mitochondrial [Homo sapiens]
gi|22257023|sp|Q9BYD1.1|RM13_HUMAN RecName: Full=39S ribosomal protein L13, mitochondrial;
Short=L13mt; Short=MRP-L13
gi|13559371|dbj|BAB40845.1| mitochondrial ribosomal protein L13 (L13mt) [Homo sapiens]
gi|14327932|gb|AAH09190.1| Mitochondrial ribosomal protein L13 [Homo sapiens]
gi|18204991|gb|AAH21744.1| Mitochondrial ribosomal protein L13 [Homo sapiens]
gi|119612410|gb|EAW92004.1| mitochondrial ribosomal protein L13, isoform CRA_b [Homo sapiens]
gi|123992882|gb|ABM84043.1| mitochondrial ribosomal protein L13 [synthetic construct]
gi|123993623|gb|ABM84413.1| mitochondrial ribosomal protein L13 [synthetic construct]
gi|123999768|gb|ABM87394.1| mitochondrial ribosomal protein L13 [synthetic construct]
gi|189065142|dbj|BAG34865.1| unnamed protein product [Homo sapiens]
Length = 178
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 53/76 (69%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+ +PED+LKN+ ++ Q R +P+ L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMERLHLFPDEYIPEDILKNLVEELPQPRKIPKRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
+D FP++ P+DY L
Sbjct: 163 IDAFPRLWTPPEDYRL 178
>gi|355704288|gb|AES02177.1| mitochondrial ribosomal protein L13 [Mustela putorius furo]
Length = 178
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 54/78 (69%)
Query: 1 MLVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSD 60
+ ++K A+ LP++L + LM RLH+FPD+++PED+ KN+ ++ Q R VPR L Y+
Sbjct: 101 IAIVKLAIYGMLPKNLHRRTLMQRLHLFPDEDIPEDIRKNLVEELPQPRKVPRRLDEYTQ 160
Query: 61 KEVDEFPKINDFPKDYIL 78
+E++ FP++ P+DY L
Sbjct: 161 EEIEAFPRLWSPPEDYRL 178
>gi|348529258|ref|XP_003452131.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like
[Oreochromis niloticus]
Length = 179
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 53/77 (68%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
+++ AV LPR+L + +M RLHIFP+ E+P D+ N++ ++ Q R +PR L+ Y+ +E
Sbjct: 103 IVRLAVYGMLPRNLHRRTMMQRLHIFPEDELPYDIQANLTEELPQPREIPRKLSEYTQEE 162
Query: 63 VDEFPKINDFPKDYILK 79
+D FP++ P+DY +K
Sbjct: 163 IDAFPRLWTPPEDYKMK 179
>gi|226372100|gb|ACO51675.1| 39S ribosomal protein L13, mitochondrial [Rana catesbeiana]
Length = 179
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 55/77 (71%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K AV LP++L + LM RLH+FP++++PED+L+N+ +I+Q R +PR L Y+++E
Sbjct: 103 IIKLAVYGMLPKNLHRRTLMLRLHLFPEEDIPEDILRNLVGEIKQPRAIPRRLDEYTEEE 162
Query: 63 VDEFPKINDFPKDYILK 79
++ +PK+ DY+ K
Sbjct: 163 IEAYPKLWIPSPDYLPK 179
>gi|225715426|gb|ACO13559.1| 39S ribosomal protein L13, mitochondrial [Esox lucius]
Length = 179
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
+MK AV LPR+L + +M RLH+FP+ ++PED+L+N++ ++ Q R VPR L Y+ +E
Sbjct: 103 IMKLAVYGMLPRNLHRRTMMQRLHLFPEDDLPEDILQNLTEELPQPREVPRRLDQYTPEE 162
Query: 63 VDEFPKINDFPKDYILK 79
+ FP++ P DY +K
Sbjct: 163 QEAFPQLWTPPGDYRVK 179
>gi|383864715|ref|XP_003707823.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like [Megachile
rotundata]
Length = 178
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
+++KKAV + +L + + M RLHIFPD+ VP D+L NV++QI+QLR VP L +
Sbjct: 101 MIVKKAVYSSMRGNLQRRQTMQRLHIFPDENVPADMLNNVTNQIKQLRLVPVRLHEIEPE 160
Query: 62 EVDEFPKINDFPKDYILK 79
E D+ P++ +P DY L+
Sbjct: 161 EKDKIPRLIKYPDDYQLQ 178
>gi|410905129|ref|XP_003966044.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like [Takifugu
rubripes]
Length = 179
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 53/77 (68%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K AV LPR+L + +M RLHIFP+ E+P+D+ N++ ++ Q R +PR L YS +E
Sbjct: 103 IVKLAVYGMLPRNLHRRTMMQRLHIFPEDELPDDIRANLTEELPQPREIPRKLDEYSQEE 162
Query: 63 VDEFPKINDFPKDYILK 79
++ FP++ P+DY +K
Sbjct: 163 MNAFPRLWTPPQDYKMK 179
>gi|440901944|gb|ELR52802.1| 39S ribosomal protein L13, mitochondrial, partial [Bos grunniens
mutus]
Length = 164
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 50/67 (74%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + LM RLH+FPD+++PED+LKN++ ++ Q R VPR L Y+ +E
Sbjct: 95 IVKLAIYGMLPKNLHRRTLMQRLHLFPDEDIPEDILKNLTEELPQPRKVPRRLDEYTQEE 154
Query: 63 VDEFPKI 69
++ FP++
Sbjct: 155 IEAFPRV 161
>gi|350398672|ref|XP_003485268.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like [Bombus
impatiens]
Length = 178
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
+++KKAV + +L + M RLHIFPD VP+++L NV++QI+QLR VP L +
Sbjct: 101 MIVKKAVYRAMDGTLQRRYTMQRLHIFPDDNVPKEMLDNVTNQIKQLRSVPVKLYDIPQE 160
Query: 62 EVDEFPKINDFPKDYILK 79
E D+ P++ +P DY LK
Sbjct: 161 ERDKIPRLIKYPSDYQLK 178
>gi|340709988|ref|XP_003393581.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like [Bombus
terrestris]
Length = 178
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
+++KKAV + +L + M RLHIFPD VP+++L NV++QI+QLR VP L +
Sbjct: 101 MIVKKAVYKAMDGTLQRRYTMQRLHIFPDDNVPKEMLDNVTNQIKQLRSVPVKLYDIPQE 160
Query: 62 EVDEFPKINDFPKDYILK 79
E D+ P++ +P DY LK
Sbjct: 161 ERDKIPRLIKYPSDYQLK 178
>gi|327280264|ref|XP_003224872.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like [Anolis
carolinensis]
Length = 179
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 52/74 (70%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L++ +M RLH+F D E+PE++ KN+ +++Q R VP+ L Y+ +E
Sbjct: 103 IVKLAIYGMLPKTLLRRTMMQRLHLFADDEIPEEIRKNLVEELKQPRKVPKRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDY 76
+D FP++ PKD+
Sbjct: 163 IDAFPRLWTPPKDF 176
>gi|432907940|ref|XP_004077716.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like [Oryzias
latipes]
Length = 179
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 53/77 (68%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K AV LPR+L + +M RLHIF D +P+D+ N++ +++Q R +PR L+ Y+ +E
Sbjct: 103 IVKLAVYGMLPRNLHRRTMMQRLHIFSDDALPDDIRANLTEELQQPRAIPRKLSEYTPEE 162
Query: 63 VDEFPKINDFPKDYILK 79
V+ FP++ P+DY +K
Sbjct: 163 VEAFPRLWTPPEDYKMK 179
>gi|344273022|ref|XP_003408326.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like [Loxodonta
africana]
Length = 172
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 49/67 (73%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R VPR L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELPQPRKVPRRLDEYTQEE 162
Query: 63 VDEFPKI 69
+D FP++
Sbjct: 163 IDAFPRL 169
>gi|47220810|emb|CAG00017.1| unnamed protein product [Tetraodon nigroviridis]
Length = 175
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 54/77 (70%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K AV LP++L + +M RLH+FP+ +P+D+L N++ ++ Q R +PR L+ Y+ +E
Sbjct: 99 IVKLAVYGMLPKNLHRRTMMQRLHLFPEDVLPDDVLANLTEELPQPREIPRKLSEYTQEE 158
Query: 63 VDEFPKINDFPKDYILK 79
+D FP++ P+DY +K
Sbjct: 159 MDAFPRLWTPPQDYKMK 175
>gi|410987738|ref|XP_004000152.1| PREDICTED: 39S ribosomal protein L13, mitochondrial [Felis catus]
Length = 178
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 53/76 (69%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + LM RLH+FPD+++PED+ +N+ ++ Q R VPR L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTLMQRLHLFPDEDIPEDIRENLVEELPQPRKVPRRLDEYTREE 162
Query: 63 VDEFPKINDFPKDYIL 78
++ FP++ P+DY L
Sbjct: 163 IEAFPRVWSPPEDYRL 178
>gi|209735174|gb|ACI68456.1| 39S ribosomal protein L13, mitochondrial [Salmo salar]
Length = 179
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K AV LPR+L + +M RLH+FP+ ++PED+L N++ ++ Q R +PR L YS +E
Sbjct: 103 IVKLAVYGMLPRNLSRRTMMQRLHLFPEDDLPEDILLNLTEELPQPREIPRRLNGYSQEE 162
Query: 63 VDEFPKINDFPKDYILK 79
+ FP + P+DY +K
Sbjct: 163 REAFPTLWTPPEDYRMK 179
>gi|301780324|ref|XP_002925579.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 178
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 53/76 (69%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PE++ KN+ ++ Q R VPR L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMQRLHLFPDEDIPENIRKNLVEELPQPRKVPRRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
++ FP++ P+DY L
Sbjct: 163 IEAFPRVWSPPEDYRL 178
>gi|156538823|ref|XP_001607973.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like [Nasonia
vitripennis]
Length = 178
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
++++KAV L +L + M RLH+F + E+PE + N+SSQI+QLRPVP L S +
Sbjct: 101 MIVQKAVYSVLGSTLKRRYDMKRLHVFYNDEIPEKIKANISSQIKQLRPVPVRLDHISQE 160
Query: 62 EVDEFPKINDFPKDYIL 78
E+D+FP++ P Y+L
Sbjct: 161 ELDQFPQLVKLPDKYVL 177
>gi|209736368|gb|ACI69053.1| 39S ribosomal protein L13, mitochondrial [Salmo salar]
Length = 179
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K AV LPR+L + +M RLH+FP+ ++PED+L N++ ++ Q R +PR L YS +E
Sbjct: 103 IVKLAVYGMLPRNLSRRTMMQRLHLFPEGDLPEDILLNLTEELPQPREIPRRLNEYSQEE 162
Query: 63 VDEFPKINDFPKDYILK 79
+ FP + P+DY +K
Sbjct: 163 REAFPTLWTPPEDYRMK 179
>gi|387017076|gb|AFJ50656.1| 39S ribosomal protein L13, mitochondrial-like [Crotalus adamanteus]
Length = 179
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD +PED+ KN+ ++ Q R VP+ L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMQRLHLFPDNVIPEDIRKNLVEELPQPRIVPKKLNEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
+D FPKI P+D+ L
Sbjct: 163 IDAFPKIWTPPEDFRL 178
>gi|21312936|ref|NP_081035.1| 39S ribosomal protein L13, mitochondrial [Mus musculus]
gi|22257024|sp|Q9D1P0.1|RM13_MOUSE RecName: Full=39S ribosomal protein L13, mitochondrial;
Short=L13mt; Short=MRP-L13
gi|12833853|dbj|BAB22688.1| unnamed protein product [Mus musculus]
gi|13559373|dbj|BAB40846.1| mitochondrial ribosomal protein L13 (L13mt) [Mus musculus]
gi|38511998|gb|AAH60968.1| Mitochondrial ribosomal protein L13 [Mus musculus]
gi|148697329|gb|EDL29276.1| mitochondrial ribosomal protein L13, isoform CRA_a [Mus musculus]
Length = 178
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 52/74 (70%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R VP+ L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELPQPRRVPKRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDY 76
++ FP++ P D+
Sbjct: 163 IEAFPRVWTPPDDF 176
>gi|33585876|gb|AAH55470.1| Mrpl13 protein, partial [Mus musculus]
Length = 175
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 52/74 (70%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R VP+ L Y+ +E
Sbjct: 100 IVKLAIYGMLPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELPQPRRVPKRLDEYTQEE 159
Query: 63 VDEFPKINDFPKDY 76
++ FP++ P D+
Sbjct: 160 IEAFPRVWTPPDDF 173
>gi|149642054|ref|XP_001514853.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like
[Ornithorhynchus anatinus]
Length = 179
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A +LP++L + M RLH+FPD++VPE +LKN+ ++ Q R VPR L Y+ +E
Sbjct: 103 IVKLATYGKLPKNLHRRIRMQRLHLFPDEDVPESILKNLVEELSQPRRVPRRLDEYTKEE 162
Query: 63 VDEFPKINDFPKDYILK 79
++ FP++ P D+ L+
Sbjct: 163 IEAFPRLWALPDDFRLQ 179
>gi|147906356|ref|NP_001088908.1| mitochondrial ribosomal protein L13 [Xenopus laevis]
gi|56788748|gb|AAH88795.1| LOC496258 protein [Xenopus laevis]
Length = 179
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 53/77 (68%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
+MK V LP++L++ +M RLH+FP+ +VPE+++KN+ ++I Q R VP+ L YS +E
Sbjct: 103 IMKLTVYGMLPKNLLRRTMMQRLHLFPEDDVPEEIMKNIFAEIPQPRKVPKKLDEYSPEE 162
Query: 63 VDEFPKINDFPKDYILK 79
++ FPK+ D+I K
Sbjct: 163 IEAFPKLWIPSPDFIRK 179
>gi|149066375|gb|EDM16248.1| mitochondrial ribosomal protein L13, isoform CRA_c [Rattus
norvegicus]
gi|149066376|gb|EDM16249.1| mitochondrial ribosomal protein L13, isoform CRA_c [Rattus
norvegicus]
Length = 162
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 51/74 (68%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R VP+ L Y+ +E
Sbjct: 87 IVKLATYGMLPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELPQPRRVPKRLDEYTQEE 146
Query: 63 VDEFPKINDFPKDY 76
++ FP++ P D+
Sbjct: 147 IEAFPRVWAPPDDF 160
>gi|55741549|ref|NP_001006986.1| 39S ribosomal protein L13, mitochondrial [Rattus norvegicus]
gi|54261554|gb|AAH84710.1| Mitochondrial ribosomal protein L13 [Rattus norvegicus]
gi|149066373|gb|EDM16246.1| mitochondrial ribosomal protein L13, isoform CRA_a [Rattus
norvegicus]
Length = 178
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 51/74 (68%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R VP+ L Y+ +E
Sbjct: 103 IVKLATYGMLPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELPQPRRVPKRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDY 76
++ FP++ P D+
Sbjct: 163 IEAFPRVWAPPDDF 176
>gi|441648029|ref|XP_004090850.1| PREDICTED: 39S ribosomal protein L13, mitochondrial isoform 3
[Nomascus leucogenys]
Length = 173
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 49/67 (73%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R +P+ L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMERLHLFPDEDIPEDILKNLVEELPQPRKIPKRLDEYTQEE 162
Query: 63 VDEFPKI 69
+D FP++
Sbjct: 163 IDAFPRL 169
>gi|391335409|ref|XP_003742086.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like
[Metaseiulus occidentalis]
Length = 185
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
V++KAV LP L + M+RLH++ D +P+++ +N++ Q+RQLR VPR L + E
Sbjct: 110 VLEKAVYRALPGDLTRRLRMSRLHLYADDSIPDEIKENITRQLRQLRKVPRKLDDIPEDE 169
Query: 63 VDEFPKINDFPKDYIL 78
FPK+ DFP+++ L
Sbjct: 170 RRSFPKLFDFPENHTL 185
>gi|417396567|gb|JAA45317.1| Putative 39s ribosomal protein l13 [Desmodus rotundus]
Length = 178
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 52/76 (68%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+ +PED+L+N+ ++ Q R VP+ L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMQRLHLFPDESIPEDILQNLVEELPQPRKVPKRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
V FP++ P+D+ L
Sbjct: 163 VAAFPRLWTPPEDFRL 178
>gi|363731105|ref|XP_418462.3| PREDICTED: 39S ribosomal protein L13, mitochondrial [Gallus gallus]
Length = 179
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%)
Query: 12 LPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKIND 71
LP++L++ LM RLH+FPD +PED+ KN+ +I Q R VPR L Y+ +E+ FP++
Sbjct: 112 LPKNLLRRTLMQRLHLFPDDVIPEDIEKNLLQEIPQPRVVPRRLDEYTPEEIAAFPRVWT 171
Query: 72 FPKDYILK 79
PKD+ +K
Sbjct: 172 PPKDFRMK 179
>gi|431901700|gb|ELK08577.1| 39S ribosomal protein L13, mitochondrial [Pteropus alecto]
Length = 206
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 49/67 (73%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R VP+ L Y+ +E
Sbjct: 114 IVKLAIYGMLPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELPQPRKVPKRLDEYTQEE 173
Query: 63 VDEFPKI 69
++ FP++
Sbjct: 174 IEAFPRV 180
>gi|326918046|ref|XP_003205303.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like [Meleagris
gallopavo]
Length = 179
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%)
Query: 12 LPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKIND 71
LP++L++ LM RLH+FP+ +PED+ KN+ +I Q R VPR L Y+ +E+ FP++
Sbjct: 112 LPKNLLRRTLMQRLHLFPEDVIPEDIEKNLLQEIPQPRVVPRRLDEYTPEEIAAFPRVWT 171
Query: 72 FPKDYILK 79
PKD+ +K
Sbjct: 172 PPKDFRMK 179
>gi|116284345|gb|AAH27542.1| Mrpl13 protein [Mus musculus]
Length = 68
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 47/65 (72%)
Query: 12 LPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKIND 71
LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R VP+ L Y+ +E++ FP++
Sbjct: 2 LPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELPQPRRVPKRLDEYTQEEIEAFPRVWT 61
Query: 72 FPKDY 76
P D+
Sbjct: 62 PPDDF 66
>gi|224046673|ref|XP_002199338.1| PREDICTED: 39S ribosomal protein L13, mitochondrial [Taeniopygia
guttata]
Length = 188
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K AV LP++L + LM RLH+FP+ +PED+ KN+ +I Q R VP+ L Y+ +E
Sbjct: 112 IVKLAVYRMLPKNLQRRTLMQRLHLFPEDVIPEDIEKNLLQEIPQPRAVPKRLDEYTPEE 171
Query: 63 VDEFPKINDFPKDY 76
+ FPK+ PKD+
Sbjct: 172 IAAFPKVWTPPKDF 185
>gi|319071186|ref|NP_001187928.1| mitochondrial 39S ribosomal protein l13 [Ictalurus punctatus]
gi|308324355|gb|ADO29312.1| mitochondrial 39S ribosomal protein l13 [Ictalurus punctatus]
Length = 179
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K AV LP++L + +M RLH+F D +P+D+L N++ ++ Q R +PR L+ Y+ E
Sbjct: 103 IIKLAVYGMLPKNLKRRTMMQRLHLFADDVLPDDILSNLTEELPQPRAIPRKLSEYTQAE 162
Query: 63 VDEFPKINDFPKDYILK 79
D FP + P+DY +K
Sbjct: 163 RDAFPLLWTPPEDYRMK 179
>gi|351715350|gb|EHB18269.1| 39S ribosomal protein L13, mitochondrial, partial [Heterocephalus
glaber]
Length = 164
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 48/67 (71%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K AV LP++L + +M RLH+FPD+++PEDLL+N+ ++ Q R VP+ L Y+ +E
Sbjct: 95 IVKLAVYGMLPKNLHRRTMMQRLHLFPDEDIPEDLLRNLVEELPQPRKVPQRLDEYTQEE 154
Query: 63 VDEFPKI 69
+ FP++
Sbjct: 155 REAFPRV 161
>gi|345779102|ref|XP_539150.3| PREDICTED: 39S ribosomal protein L13, mitochondrial [Canis lupus
familiaris]
Length = 172
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + LM RLH+FPD+++PED+ KN+ ++ Q R VPR L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTLMQRLHLFPDEDIPEDIRKNLVEELPQPRKVPRRLDEYTQEE 162
Query: 63 VDEFP 67
++ FP
Sbjct: 163 IEAFP 167
>gi|281350862|gb|EFB26446.1| hypothetical protein PANDA_015100 [Ailuropoda melanoleuca]
Length = 163
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 48/67 (71%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PE++ KN+ ++ Q R VPR L Y+ +E
Sbjct: 94 IVKLAIYGMLPKNLHRRTMMQRLHLFPDEDIPENIRKNLVEELPQPRKVPRRLDEYTQEE 153
Query: 63 VDEFPKI 69
++ FP++
Sbjct: 154 IEAFPRV 160
>gi|256070187|ref|XP_002571425.1| 50S ribosomal protein L13 [Schistosoma mansoni]
Length = 196
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
Query: 22 MARLHIFPD--QEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKINDFPKDY 76
++RLHI+P+ + +P+D++ N+S I Q+ VP+ L +YS +E++EFPK+ D+P+DY
Sbjct: 122 LSRLHIYPENIETIPKDIIANISGVIPQVMKVPKRLENYSTEELNEFPKLFDWPEDY 178
>gi|360042652|emb|CCD78062.1| putative 50s ribosomal protein L13 [Schistosoma mansoni]
Length = 196
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
Query: 22 MARLHIFPD--QEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKINDFPKDY 76
++RLHI+P+ + +P+D++ N+S I Q+ VP+ L YS +E++EFPK+ D+P+DY
Sbjct: 122 LSRLHIYPENIETIPKDIIANISGVIPQVMKVPKRLEDYSTEELNEFPKLFDWPEDY 178
>gi|339244925|ref|XP_003378388.1| heat shockprotein A [Trichinella spiralis]
gi|316972704|gb|EFV56367.1| heat shockprotein A [Trichinella spiralis]
Length = 1003
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 18 KFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKINDFPKDY 76
K R + RLH+F D++VP LLKNV + + Q+ VP+ Y+++E FPKI P DY
Sbjct: 926 KRRNIERLHVFADKDVPSHLLKNVCNHLEQVMRVPKRYDDYTEEERRNFPKIVQLPDDY 984
>gi|390476013|ref|XP_002759319.2| PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L13,
mitochondrial [Callithrix jacchus]
Length = 172
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R +P+ L Y+ +
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELPQPRKIPKRLDEYTRRN 162
Query: 63 VDEFPKIND 71
FPKI D
Sbjct: 163 -RRFPKIVD 170
>gi|324509194|gb|ADY43869.1| 39S ribosomal protein L13 [Ascaris suum]
Length = 198
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
+M A+ L +++ R + RLH+FP+ VPE + +N+ +Q+ Q++ VP+ Y+ +E
Sbjct: 102 IMYLAIYKSLGSGVVRRRHIQRLHLFPNDSVPEFIRRNIGAQMEQVQSVPKRSDEYTAEE 161
Query: 63 VDEFPKINDFPKDYIL 78
FP++ FP D+++
Sbjct: 162 RAAFPRLFRFPDDHVI 177
>gi|226489064|emb|CAX74881.1| hypotherical protein [Schistosoma japonicum]
Length = 218
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 18 KFRLMARLHIFPD--QEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKINDFPKD 75
K++L RLHI+P+ + VP+D++ NVS I Q+ VP+ L YS E+ EFPK+ D+P+D
Sbjct: 123 KYQLF-RLHIYPENIETVPKDIIANVSGVIPQVMRVPKRLDEYSPSELKEFPKLFDWPED 181
Query: 76 Y 76
Y
Sbjct: 182 Y 182
>gi|226489068|emb|CAX74883.1| hypotherical protein [Schistosoma japonicum]
Length = 196
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 18 KFRLMARLHIFPD--QEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKINDFPKD 75
K++L RLHI+P+ + VP+D++ NVS I Q+ VP+ L YS E+ EFPK+ D+P+D
Sbjct: 119 KYQLF-RLHIYPENIETVPKDIIANVSGVIPQVMRVPKRLDEYSPSELKEFPKLFDWPED 177
Query: 76 Y 76
Y
Sbjct: 178 Y 178
>gi|226489066|emb|CAX74882.1| hypotherical protein [Schistosoma japonicum]
Length = 196
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 18 KFRLMARLHIFPD--QEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKINDFPKD 75
K++L RLHI+P+ + VP+D++ NVS I Q+ VP+ L YS E+ EFPK+ D+P+D
Sbjct: 119 KYQLF-RLHIYPENIETVPKDIIANVSGVIPQVMRVPKRLDEYSPSELKEFPKLFDWPED 177
Query: 76 Y 76
Y
Sbjct: 178 Y 178
>gi|426360604|ref|XP_004047528.1| PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L13,
mitochondrial [Gorilla gorilla gorilla]
Length = 173
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 1 MLVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSD 60
++++K A+ LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R +P+ L Y+
Sbjct: 102 IIIVKLAIYGMLPKNLHRRTMMKRLHLFPDEDIPEDILKNLVEELPQPRKIPKRLDEYTR 161
Query: 61 KEVDEFPKIND 71
+ PKI D
Sbjct: 162 RN-RRLPKIVD 171
>gi|449512151|ref|XP_004176005.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like, partial
[Taeniopygia guttata]
Length = 62
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%)
Query: 12 LPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKI 69
LP++L + LM RLH+FP+ +PED+ KN+ +I Q R VP+ L Y+ +E+ FPK+
Sbjct: 2 LPKNLQRRTLMQRLHLFPEDVIPEDIEKNLLQEIPQPRAVPKRLDEYTPEEIAAFPKV 59
>gi|395740012|ref|XP_003780609.1| PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L13,
mitochondrial [Pongo abelii]
Length = 112
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R +P+ L Y+ ++
Sbjct: 43 IVKLAIYGMLPKNLHRRTMMERLHLFPDEDIPEDILKNLVEELPQPRKIPKRLDEYTRRD 102
Query: 63 VDEFPKIND 71
PKI D
Sbjct: 103 -RRLPKIVD 110
>gi|449278626|gb|EMC86427.1| 39S ribosomal protein L13, mitochondrial, partial [Columba livia]
Length = 70
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K V LP++L + +M RLH+FP+ +PED+ KN+ +I Q R VP+ L Y+ +E
Sbjct: 1 IVKLTVYRMLPKNLQRRTMMQRLHLFPEDVIPEDIEKNLLQEIPQPRVVPKRLDEYTPEE 60
Query: 63 VDEFPKI 69
+ FPKI
Sbjct: 61 IAAFPKI 67
>gi|56758628|gb|AAW27454.1| SJCHGC04496 protein [Schistosoma japonicum]
Length = 105
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 18 KFRLMARLHIFPD--QEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKINDFPKD 75
K++L RLHI+P+ + VP+D++ NVS I Q+ VP+ L YS E+ EFPK+ D+P+D
Sbjct: 28 KYQLF-RLHIYPENIETVPKDIIANVSGVIPQVMRVPKRLDEYSPSELKEFPKLFDWPED 86
Query: 76 Y 76
Y
Sbjct: 87 Y 87
>gi|17506617|ref|NP_492067.1| Protein MRPL-13 [Caenorhabditis elegans]
gi|15718143|emb|CAC70086.1| Protein MRPL-13 [Caenorhabditis elegans]
Length = 205
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 43/67 (64%)
Query: 12 LPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKIND 71
L +L++ R + RLH+FPD+E+ E + KN+ SQ+RQ++ V + Y+ +E FP++
Sbjct: 117 LGNNLLRRRHIQRLHLFPDEEMAEFVRKNIGSQLRQVQGVVKRSDEYTAEERANFPRVVK 176
Query: 72 FPKDYIL 78
F +++
Sbjct: 177 FADKHVV 183
>gi|6563216|gb|AAF17202.1|AF112214_1 ribosomal protein L13 [Homo sapiens]
Length = 172
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+ +PED+LKN+ ++ Q R +P+ L Y+ +
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMERLHLFPDEYIPEDILKNLVEELPQPRKIPKRLDEYTRRN 162
>gi|198425639|ref|XP_002125869.1| PREDICTED: similar to LOC496258 protein [Ciona intestinalis]
Length = 182
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 3 VMKKAVRWELPRS----LIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASY 58
++K+ V LP+ + K L +LH+F D+ +PE++ +N+S I Q R V + + Y
Sbjct: 102 IVKRYVYRRLPKGSYGGMYKRNLFQKLHVFADENIPEEIKENISFVIPQPRRVFKGINDY 161
Query: 59 SDKEVDEFPKI 69
+ +E+D FPK+
Sbjct: 162 TQEEIDNFPKL 172
>gi|170576833|ref|XP_001893782.1| 39S ribosomal protein L13, mitochondrial [Brugia malayi]
gi|158600005|gb|EDP37380.1| 39S ribosomal protein L13, mitochondrial, putative [Brugia malayi]
Length = 207
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 45/76 (59%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
+M V L + ++ RL+ RLH+F D ++P + KN+ +Q+ Q++ V + Y+ +E
Sbjct: 104 IMHMTVYKGLDHNQLRKRLIERLHLFADDQIPTFVRKNIGNQMEQVQRVAKRSDEYTAEE 163
Query: 63 VDEFPKINDFPKDYIL 78
+FP++ F +++ +
Sbjct: 164 RAKFPRLFKFGENHFI 179
>gi|99032314|pdb|2FTC|H Chain H, Structural Model For The Large Subunit Of The Mammalian
Mitochondrial Ribosome
Length = 148
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 33/45 (73%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQ 47
++K A+ LP++L + +M RLH+FPD+ +PED+LKN+ ++ Q
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMERLHLFPDEYIPEDILKNLVEELPQ 147
>gi|312092419|ref|XP_003147330.1| 39S ribosomal protein L13 [Loa loa]
gi|307757507|gb|EFO16741.1| 39S ribosomal protein L13 [Loa loa]
Length = 207
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
+M V L + ++ RL+ RLH+F D ++P + +N+ + + Q++ VP+ Y+ +E
Sbjct: 104 LMHMTVYRGLDHNQLRKRLIERLHLFADDQMPMFVRRNIGNHMEQVQRVPKRSDEYTAEE 163
Query: 63 VDEFPKINDFPKDYIL 78
+FP++ F D+ +
Sbjct: 164 RAKFPRLFKFGDDHFV 179
>gi|308462123|ref|XP_003093347.1| hypothetical protein CRE_30165 [Caenorhabditis remanei]
gi|308250296|gb|EFO94248.1| hypothetical protein CRE_30165 [Caenorhabditis remanei]
Length = 205
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 28 FPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKINDFPKDYIL 78
FPD E+PE + +NV SQ+RQ++ V + Y+ +E FPK+ F + +++
Sbjct: 133 FPDSEMPEFVRQNVGSQLRQVQEVVKRADEYTSEERARFPKVVKFAEGHVV 183
>gi|341877047|gb|EGT32982.1| hypothetical protein CAEBREN_10968 [Caenorhabditis brenneri]
Length = 205
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 28 FPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKINDFPKDYIL 78
FPD E+P+ + KN+ SQ+RQ++ V + Y+++E +FPKI F +++
Sbjct: 133 FPDSEMPDFVRKNIGSQLRQVQEVVKRSDEYTEEERAKFPKIVKFADGHVV 183
>gi|341889457|gb|EGT45392.1| hypothetical protein CAEBREN_23803 [Caenorhabditis brenneri]
Length = 205
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%)
Query: 28 FPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKINDFPKDYIL 78
FPD E+P+ + KN+ +Q+RQ++ V + Y+++E +FPKI F +++
Sbjct: 133 FPDSEMPDFVRKNIGNQLRQVQEVVKRSDEYTEEERAKFPKIVKFADGHVV 183
>gi|268529462|ref|XP_002629857.1| Hypothetical protein CBG21891 [Caenorhabditis briggsae]
Length = 205
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%)
Query: 28 FPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKINDFPKDYIL 78
FPD EVP+ + KN+ SQ+RQ++ V + Y+ +E FP++ F + +++
Sbjct: 133 FPDSEVPDFVRKNIGSQLRQVQEVVKRSDEYTAEERAAFPRVVKFTEGHVV 183
>gi|392342300|ref|XP_003754550.1| PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L13,
mitochondrial-like [Rattus norvegicus]
Length = 200
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 12 LPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKIND 71
LP L + M RLH+FPD+++PE++LK++ ++ Q R VP+ S K+ P++
Sbjct: 122 LPEILHRRTRMQRLHLFPDEDIPEEILKDLVEELPQPRRVPKGWTSTLKKKQRFSPRVWA 181
Query: 72 FPKD 75
P++
Sbjct: 182 PPEN 185
>gi|392350558|ref|XP_003750689.1| PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L13,
mitochondrial-like [Rattus norvegicus]
Length = 210
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 12 LPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKIND 71
LP L + M RLH+FPD+++PE++LK++ ++ Q R VP+ S K+ P++
Sbjct: 132 LPEILHRRTRMQRLHLFPDEDIPEEILKDLVEELPQPRRVPKGWTSTLKKKQRFSPRVWA 191
Query: 72 FPKD 75
P++
Sbjct: 192 PPEN 195
>gi|221091234|ref|XP_002158127.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like [Hydra
magnipapillata]
Length = 169
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++ +AVR +P++ + M RLH+F D + P N+ ++++ P+PR L Y+ E
Sbjct: 104 ILWRAVRGMMPKTRSRNLQMKRLHLFEDDQHP--FATNIYAKLKAPHPMPRRLDEYTADE 161
Query: 63 VDEFPKI 69
+ +P++
Sbjct: 162 IKNYPRL 168
>gi|340371877|ref|XP_003384471.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like
[Amphimedon queenslandica]
Length = 177
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
V+ KA+ LP++ ++ + M RL++FPD+E P KN+ + + L ++ +E
Sbjct: 105 VLYKAINGCLPKNGMRLKRMNRLYLFPDEEHP--YAKNIYKVLDGPCQPFKKLEDFTIEE 162
Query: 63 VDEFPKI-NDF 72
++ FP + NDF
Sbjct: 163 IESFPNLRNDF 173
>gi|403177148|ref|XP_003335717.2| hypothetical protein PGTG_17155 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172750|gb|EFP91298.2| large subunit ribosomal protein L13 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 208
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVP 34
++++KAV LP++ ++ R + RLHIFPD+E P
Sbjct: 143 MILRKAVSGMLPKNKLRDRRLERLHIFPDEEHP 175
>gi|156357142|ref|XP_001624082.1| predicted protein [Nematostella vectensis]
gi|156210836|gb|EDO31982.1| predicted protein [Nematostella vectensis]
Length = 168
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++ +AV LP++ ++ M RL++F D+ P +N+ +++ +P+ L YS +E
Sbjct: 103 ILWRAVNGMLPKNNLRPTWMKRLYLFEDEHHP--YAENIFAKLEAPASIPKRLHEYSPEE 160
Query: 63 VDEFPKI 69
+ +PK+
Sbjct: 161 ISNYPKL 167
>gi|345487939|ref|XP_003425793.1| PREDICTED: tetratricopeptide repeat protein 28-like [Nasonia
vitripennis]
Length = 2107
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 11 ELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
++ R ++F L A L +F QE P+ L + S + L P+P+T S++
Sbjct: 1777 QVSRRAVQFALQALLALFDTQEAPKSLSLDSGSSMENLAPIPQTERGLSER 1827
>gi|319776854|ref|YP_004136505.1| hypothetical protein MfeM64YM_0120 [Mycoplasma fermentans M64]
gi|318037929|gb|ADV34128.1| Hypothetical Protein MfeM64YM_0120 [Mycoplasma fermentans M64]
Length = 481
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 30 DQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKINDF 72
D+ + + +K +S +RQ+ VP LAS+SD+E++ PK+ D+
Sbjct: 236 DESINDQNIKTDNSNLRQIHFVP--LASWSDEEIERLPKVIDW 276
>gi|238809639|dbj|BAH69429.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 487
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 30 DQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKINDF 72
D+ + + +K +S +RQ+ VP LAS+SD+E++ PK+ D+
Sbjct: 242 DESINDQNIKTDNSNLRQIHFVP--LASWSDEEIERLPKVIDW 282
>gi|308189671|ref|YP_003922602.1| hypothetical protein MFE_00970 [Mycoplasma fermentans JER]
gi|307624413|gb|ADN68718.1| hypothetical membrane spanning protein [Mycoplasma fermentans JER]
Length = 481
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 30 DQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKINDF 72
D+ + + +K +S +RQ+ VP LAS+SD+E++ PK+ D+
Sbjct: 236 DESINDQNIKTDNSNLRQIHFVP--LASWSDEEIERLPKVIDW 276
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.140 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,171,388,769
Number of Sequences: 23463169
Number of extensions: 37436944
Number of successful extensions: 104752
Number of sequences better than 100.0: 131
Number of HSP's better than 100.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 104624
Number of HSP's gapped (non-prelim): 131
length of query: 79
length of database: 8,064,228,071
effective HSP length: 50
effective length of query: 29
effective length of database: 6,891,069,621
effective search space: 199841019009
effective search space used: 199841019009
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 69 (31.2 bits)