Your job contains 1 sequence.
>psy6291
MLVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSD
KEVDEFPKINDFPKDYILK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6291
(79 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q3SYS1 - symbol:MRPL13 "39S ribosomal protein L... 186 1.4e-14 1
ZFIN|ZDB-GENE-050522-167 - symbol:mrpl13 "mitochondrial r... 183 3.0e-14 1
FB|FBgn0032720 - symbol:mRpL13 "mitochondrial ribosomal p... 182 3.8e-14 1
UNIPROTKB|F1S286 - symbol:MRPL13 "Uncharacterized protein... 181 4.9e-14 1
UNIPROTKB|K7GP19 - symbol:MRPL13 "Uncharacterized protein... 181 4.9e-14 1
UNIPROTKB|Q9BYD1 - symbol:MRPL13 "39S ribosomal protein L... 175 2.1e-13 1
UNIPROTKB|J9P023 - symbol:MRPL13 "Uncharacterized protein... 172 4.4e-13 1
MGI|MGI:2137218 - symbol:Mrpl13 "mitochondrial ribosomal ... 169 9.1e-13 1
UNIPROTKB|E1BWS7 - symbol:MRPL13 "Uncharacterized protein... 165 2.4e-12 1
RGD|1359587 - symbol:Mrpl13 "mitochondrial ribosomal prot... 165 2.4e-12 1
UNIPROTKB|E5RJI7 - symbol:MRPL13 "39S ribosomal protein L... 162 5.0e-12 1
UNIPROTKB|E2RT81 - symbol:MRPL13 "Uncharacterized protein... 158 1.3e-11 1
WB|WBGene00008769 - symbol:mrpl-13 species:6239 "Caenorha... 120 1.8e-07 1
UNIPROTKB|H0YAX3 - symbol:MRPL13 "39S ribosomal protein L... 110 1.6e-06 1
UNIPROTKB|F1LYZ7 - symbol:F1LYZ7 "Uncharacterized protein... 105 5.5e-06 1
>UNIPROTKB|Q3SYS1 [details] [associations]
symbol:MRPL13 "39S ribosomal protein L13, mitochondrial"
species:9913 "Bos taurus" [GO:0005761 "mitochondrial ribosome"
evidence=ISS] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
GO:GO:0006412 GO:GO:0003735 GO:GO:0005761 eggNOG:COG0102
Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161 KO:K02871
TIGRFAMs:TIGR01066 HOGENOM:HOG000225288 PDB:2FTC PDBsum:2FTC
EMBL:BC103423 IPI:IPI00707300 RefSeq:NP_001029977.1
UniGene:Bt.49122 ProteinModelPortal:Q3SYS1 STRING:Q3SYS1
PRIDE:Q3SYS1 Ensembl:ENSBTAT00000008903 GeneID:617901
KEGG:bta:617901 CTD:28998 GeneTree:ENSGT00390000001515
HOVERGEN:HBG036111 InParanoid:Q3SYS1 OMA:VQQWATF OrthoDB:EOG4Z8XXJ
EvolutionaryTrace:Q3SYS1 NextBio:20900892 Uniprot:Q3SYS1
Length = 178
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 33/76 (43%), Positives = 55/76 (72%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + LM RLH+FPD+++PED+LKN++ ++ Q R VPR L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTLMQRLHLFPDEDIPEDILKNLTEELPQPRKVPRRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
++ FP++ P+DY L
Sbjct: 163 IEAFPRVWSPPEDYRL 178
>ZFIN|ZDB-GENE-050522-167 [details] [associations]
symbol:mrpl13 "mitochondrial ribosomal protein L13"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR005822
InterPro:IPR005823 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
ZFIN:ZDB-GENE-050522-167 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066 HOGENOM:HOG000225288
CTD:28998 HOVERGEN:HBG036111 OrthoDB:EOG4Z8XXJ EMBL:BC095074
IPI:IPI00607407 RefSeq:NP_001018370.1 UniGene:Dr.82561
ProteinModelPortal:Q504D1 STRING:Q504D1 GeneID:553555
KEGG:dre:553555 InParanoid:Q504D1 NextBio:20880297 Uniprot:Q504D1
Length = 179
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 34/77 (44%), Positives = 54/77 (70%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K AV LPR+L + +M RLH+FPD +PED+LKN++ ++ Q R +PR L+ Y+ +E
Sbjct: 103 IIKLAVYGMLPRNLTRRTMMQRLHLFPDDVLPEDILKNLTEELPQPREIPRKLSEYTQEE 162
Query: 63 VDEFPKINDFPKDYILK 79
D FP++ P+DY +K
Sbjct: 163 RDAFPRLWTPPEDYRMK 179
>FB|FBgn0032720 [details] [associations]
symbol:mRpL13 "mitochondrial ribosomal protein L13"
species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
evidence=ISS;NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS;NAS] [GO:0005762 "mitochondrial large ribosomal
subunit" evidence=ISS;NAS] InterPro:IPR005822 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 EMBL:AE014134
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 eggNOG:COG0102
Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161 KO:K02871
CTD:28998 GeneTree:ENSGT00390000001515 OMA:VQQWATF EMBL:BT053702
RefSeq:NP_523598.2 UniGene:Dm.2753 ProteinModelPortal:Q9VJ38
SMR:Q9VJ38 STRING:Q9VJ38 PaxDb:Q9VJ38 EnsemblMetazoa:FBtr0089318
GeneID:35145 KEGG:dme:Dmel_CG10603 FlyBase:FBgn0032720
InParanoid:Q9VJ38 OrthoDB:EOG4WM39Z PhylomeDB:Q9VJ38
GenomeRNAi:35145 NextBio:792084 GermOnline:CG10603 Uniprot:Q9VJ38
Length = 178
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 38/79 (48%), Positives = 56/79 (70%)
Query: 2 LVMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDK 61
+VMKKAV + +L + M RLH+F D +VPE++L+NV++QIR R +P+ L + DK
Sbjct: 101 MVMKKAVYNSMRGNLQRRHTMQRLHLFADDQVPEEILQNVTNQIRTPRSIPQRL-DHIDK 159
Query: 62 E-VDEFPKINDFPKDYILK 79
E ++ FP I D+PKDYIL+
Sbjct: 160 ETLENFPNIMDYPKDYILR 178
>UNIPROTKB|F1S286 [details] [associations]
symbol:MRPL13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005761 "mitochondrial ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005822
InterPro:IPR005823 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0006412
GO:GO:0003735 GO:GO:0005761 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066 CTD:28998
GeneTree:ENSGT00390000001515 OMA:VQQWATF EMBL:CU302271
EMBL:CU468161 RefSeq:NP_001230344.1 UniGene:Ssc.20756
Ensembl:ENSSSCT00000006579 GeneID:100153348 KEGG:ssc:100153348
Uniprot:F1S286
Length = 178
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 32/76 (42%), Positives = 54/76 (71%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R VPR L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELPQPRKVPRRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
++ FP++ P+DY L
Sbjct: 163 IEAFPRVWSPPEDYRL 178
>UNIPROTKB|K7GP19 [details] [associations]
symbol:MRPL13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR005822 InterPro:IPR005823
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 Gene3D:3.90.1180.10
PANTHER:PTHR11545 SUPFAM:SSF52161 TIGRFAMs:TIGR01066
GeneTree:ENSGT00390000001515 EMBL:CU302271 EMBL:CU468161
Ensembl:ENSSSCT00000034332 Uniprot:K7GP19
Length = 154
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 32/76 (42%), Positives = 54/76 (71%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R VPR L Y+ +E
Sbjct: 79 IVKLAIYGMLPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELPQPRKVPRRLDEYTQEE 138
Query: 63 VDEFPKINDFPKDYIL 78
++ FP++ P+DY L
Sbjct: 139 IEAFPRVWSPPEDYRL 154
>UNIPROTKB|Q9BYD1 [details] [associations]
symbol:MRPL13 "39S ribosomal protein L13, mitochondrial"
species:9606 "Homo sapiens" [GO:0006412 "translation" evidence=NAS]
[GO:0003735 "structural constituent of ribosome" evidence=NAS]
[GO:0005762 "mitochondrial large ribosomal subunit"
evidence=IDA;NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005761 "mitochondrial ribosome" evidence=IDA]
InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
EMBL:AB049640 EMBL:CH471060 GO:GO:0006412 GO:GO:0005762
GO:GO:0003735 eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066 HOGENOM:HOG000225288
CTD:28998 HOVERGEN:HBG036111 OMA:VQQWATF OrthoDB:EOG4Z8XXJ
EMBL:AF112214 EMBL:AK311924 EMBL:BC009190 EMBL:BC021744
IPI:IPI00022403 RefSeq:NP_054797.2 UniGene:Hs.333823
ProteinModelPortal:Q9BYD1 SMR:Q9BYD1 IntAct:Q9BYD1 STRING:Q9BYD1
PhosphoSite:Q9BYD1 DMDM:22257023 PaxDb:Q9BYD1 PRIDE:Q9BYD1
DNASU:28998 Ensembl:ENST00000306185 GeneID:28998 KEGG:hsa:28998
UCSC:uc003ypa.3 GeneCards:GC08M121477 HGNC:HGNC:14278 MIM:610200
neXtProt:NX_Q9BYD1 PharmGKB:PA30942 InParanoid:Q9BYD1
PhylomeDB:Q9BYD1 GenomeRNAi:28998 NextBio:51932 ArrayExpress:Q9BYD1
Bgee:Q9BYD1 CleanEx:HS_MRPL13 Genevestigator:Q9BYD1
GermOnline:ENSG00000172172 Uniprot:Q9BYD1
Length = 178
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 31/76 (40%), Positives = 53/76 (69%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+ +PED+LKN+ ++ Q R +P+ L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMERLHLFPDEYIPEDILKNLVEELPQPRKIPKRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
+D FP++ P+DY L
Sbjct: 163 IDAFPRLWTPPEDYRL 178
>UNIPROTKB|J9P023 [details] [associations]
symbol:MRPL13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR005822 InterPro:IPR005823
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161
TIGRFAMs:TIGR01066 GeneTree:ENSGT00390000001515 EMBL:AAEX03008768
Ensembl:ENSCAFT00000045486 Uniprot:J9P023
Length = 178
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 32/76 (42%), Positives = 52/76 (68%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + LM RLH+FPD+++PED+ KN+ ++ Q R VPR L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTLMQRLHLFPDEDIPEDIRKNLVEELPQPRKVPRRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDYIL 78
++ FP + P+DY L
Sbjct: 163 IEAFPIVWSPPEDYRL 178
>MGI|MGI:2137218 [details] [associations]
symbol:Mrpl13 "mitochondrial ribosomal protein L13"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005761 "mitochondrial ribosome" evidence=ISO] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISO] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
MGI:MGI:2137218 GO:GO:0006412 GO:GO:0005762 GO:GO:0003735
eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066 HOGENOM:HOG000225288
CTD:28998 GeneTree:ENSGT00390000001515 HOVERGEN:HBG036111
OMA:VQQWATF OrthoDB:EOG4Z8XXJ EMBL:AB049641 EMBL:AK003283
EMBL:BC060968 IPI:IPI00134011 RefSeq:NP_081035.1 UniGene:Mm.236795
ProteinModelPortal:Q9D1P0 SMR:Q9D1P0 STRING:Q9D1P0
PhosphoSite:Q9D1P0 PaxDb:Q9D1P0 PRIDE:Q9D1P0
Ensembl:ENSMUST00000172387 GeneID:68537 KEGG:mmu:68537
UCSC:uc007vsf.1 InParanoid:Q9D1P0 NextBio:327412 Bgee:Q9D1P0
CleanEx:MM_MRPL13 Genevestigator:Q9D1P0
GermOnline:ENSMUSG00000022370 Uniprot:Q9D1P0
Length = 178
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 29/74 (39%), Positives = 52/74 (70%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R VP+ L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELPQPRRVPKRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDY 76
++ FP++ P D+
Sbjct: 163 IEAFPRVWTPPDDF 176
>UNIPROTKB|E1BWS7 [details] [associations]
symbol:MRPL13 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005761
"mitochondrial ribosome" evidence=IEA] InterPro:IPR005822
GO:GO:0006412 GO:GO:0003735 GO:GO:0005761 PANTHER:PTHR11545
GeneTree:ENSGT00390000001515 EMBL:AADN02022555 EMBL:AADN02022556
IPI:IPI00590933 Ensembl:ENSGALT00000030772
Ensembl:ENSGALT00000030773 OMA:KLAVYRM Uniprot:E1BWS7
Length = 69
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/68 (45%), Positives = 47/68 (69%)
Query: 12 LPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKIND 71
LP++L++ LM RLH+FPD +PED+ KN+ +I Q R VPR L Y+ +E+ FP++
Sbjct: 2 LPKNLLRRTLMQRLHLFPDDVIPEDIEKNLLQEIPQPRVVPRRLDEYTPEEIAAFPRVWT 61
Query: 72 FPKDYILK 79
PKD+ +K
Sbjct: 62 PPKDFRMK 69
>RGD|1359587 [details] [associations]
symbol:Mrpl13 "mitochondrial ribosomal protein L13"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005761 "mitochondrial ribosome"
evidence=IEA;ISO] [GO:0005762 "mitochondrial large ribosomal
subunit" evidence=ISO] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 RGD:1359587 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CH473950 eggNOG:COG0102
Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161 KO:K02871
TIGRFAMs:TIGR01066 HOGENOM:HOG000225288 CTD:28998
GeneTree:ENSGT00390000001515 HOVERGEN:HBG036111 OMA:VQQWATF
OrthoDB:EOG4Z8XXJ EMBL:BC084710 IPI:IPI00366411
RefSeq:NP_001006986.1 UniGene:Rn.107776 STRING:Q5XFW4
Ensembl:ENSRNOT00000005815 GeneID:299938 KEGG:rno:299938
UCSC:RGD:1359587 InParanoid:Q5XFW4 NextBio:646013
Genevestigator:Q5XFW4 Uniprot:Q5XFW4
Length = 178
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 29/74 (39%), Positives = 51/74 (68%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A LP++L + +M RLH+FPD+++PED+LKN+ ++ Q R VP+ L Y+ +E
Sbjct: 103 IVKLATYGMLPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELPQPRRVPKRLDEYTQEE 162
Query: 63 VDEFPKINDFPKDY 76
++ FP++ P D+
Sbjct: 163 IEAFPRVWAPPDDF 176
>UNIPROTKB|E5RJI7 [details] [associations]
symbol:MRPL13 "39S ribosomal protein L13, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR005822 InterPro:IPR005823
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0005739 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AC107877 Gene3D:3.90.1180.10
PANTHER:PTHR11545 SUPFAM:SSF52161 TIGRFAMs:TIGR01066
HGNC:HGNC:14278 IPI:IPI01011492 ProteinModelPortal:E5RJI7
SMR:E5RJI7 Ensembl:ENST00000518918 ArrayExpress:E5RJI7 Bgee:E5RJI7
Uniprot:E5RJI7
Length = 148
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 27/67 (40%), Positives = 48/67 (71%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + +M RLH+FPD+ +PED+LKN+ ++ Q R +P+ L Y+ +E
Sbjct: 79 IVKLAIYGMLPKNLHRRTMMERLHLFPDEYIPEDILKNLVEELPQPRKIPKRLDEYTQEE 138
Query: 63 VDEFPKI 69
+D FP++
Sbjct: 139 IDAFPRL 145
>UNIPROTKB|E2RT81 [details] [associations]
symbol:MRPL13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR005822 InterPro:IPR005823
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161
TIGRFAMs:TIGR01066 GeneTree:ENSGT00390000001515 OMA:VQQWATF
EMBL:AAEX03008768 Ensembl:ENSCAFT00000001460 Uniprot:E2RT81
Length = 179
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A+ LP++L + LM RLH+FPD+++PED+ KN+ ++ Q R VPR L Y+ +E
Sbjct: 103 IVKLAIYGMLPKNLHRRTLMQRLHLFPDEDIPEDIRKNLVEELPQPRKVPRRLDEYTQEE 162
Query: 63 VDEFP 67
++ FP
Sbjct: 163 IEAFP 167
>WB|WBGene00008769 [details] [associations]
symbol:mrpl-13 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR005822 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 GO:GO:0009792 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:Z71259 eggNOG:COG0102
Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161 KO:K02871
HOGENOM:HOG000225288 GeneTree:ENSGT00390000001515 OMA:VQQWATF
RefSeq:NP_492067.1 ProteinModelPortal:Q95QL2 SMR:Q95QL2
STRING:Q95QL2 PaxDb:Q95QL2 EnsemblMetazoa:F13G3.11.1
EnsemblMetazoa:F13G3.11.2 GeneID:172479 KEGG:cel:CELE_F13G3.11
UCSC:F13G3.11 CTD:172479 WormBase:F13G3.11 InParanoid:Q95QL2
NextBio:875685 Uniprot:Q95QL2
Length = 205
Score = 120 (47.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 23/67 (34%), Positives = 43/67 (64%)
Query: 12 LPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKIND 71
L +L++ R + RLH+FPD+E+ E + KN+ SQ+RQ++ V + Y+ +E FP++
Sbjct: 117 LGNNLLRRRHIQRLHLFPDEEMAEFVRKNIGSQLRQVQGVVKRSDEYTAEERANFPRVVK 176
Query: 72 FPKDYIL 78
F +++
Sbjct: 177 FADKHVV 183
>UNIPROTKB|H0YAX3 [details] [associations]
symbol:MRPL13 "39S ribosomal protein L13, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR005822 GO:GO:0005739 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AC107877 PANTHER:PTHR11545
HGNC:HGNC:14278 Ensembl:ENST00000521648 Bgee:H0YAX3 Uniprot:H0YAX3
Length = 47
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 33 VPEDLLKNVSSQIRQLRPVPRTLASYSDKEVDEFPKINDFPKDYIL 78
+PED+LKN+ ++ Q R +P+ L Y+ +E+D FP++ P+DY L
Sbjct: 2 IPEDILKNLVEELPQPRKIPKRLDEYTQEEIDAFPRLWTPPEDYRL 47
>UNIPROTKB|F1LYZ7 [details] [associations]
symbol:F1LYZ7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR005822
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 IPI:IPI00769027 Ensembl:ENSRNOT00000061678
Uniprot:F1LYZ7
Length = 172
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 3 VMKKAVRWELPRSLIKFRLMARLHIFPDQEVPEDLLKNVSSQIRQLRPVPRTLASYSDKE 62
++K A LP L + M RLH+FPD+++PE++LK++ ++ Q R VP+ S K+
Sbjct: 96 MVKLATCDTLPEILHRRTRMQRLHLFPDEDIPEEILKDLVEELPQPRRVPKGWTSTLKKK 155
Query: 63 VDEFPKI 69
P++
Sbjct: 156 QRFSPRV 162
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.140 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 79 79 0.00091 102 3 11 22 0.37 29
29 0.39 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 483 (51 KB)
Total size of DFA: 92 KB (2068 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.07u 0.08s 10.15t Elapsed: 00:00:32
Total cpu time: 10.07u 0.08s 10.15t Elapsed: 00:00:33
Start: Thu Aug 15 13:31:42 2013 End: Thu Aug 15 13:32:15 2013