Your job contains 1 sequence.
>psy630
MSNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNK
EAVDKVFSTDSHVLEGSRLSIQPSDSHNRMAENMEDRFNQACDYLPSLVKKLDSSTLLKF
YALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQMAKSEAMSKYIALLKEVDAGWEDK
EQEEINWDWKPNQKAMSKYIALLNEVDASWEDKEQEEINWDESQESGSKENEGQTKGWVN
VSSMINDESQLDDNEKNIYEWAKEGKLDMLVKQLTKLKDFNINQLDENGLNCLHWACDRG
HLKVVQHLIEKCGADVNVTDSDGDYGLDYAKAIEHTDLIEYLVNSGS
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy630
(347 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
DICTYBASE|DDB_G0290237 - symbol:acbd6 "acyl-CoA-binding d... 316 2.4e-28 1
UNIPROTKB|F1PLQ8 - symbol:ACBD6 "Uncharacterized protein"... 256 5.5e-22 1
RGD|1305030 - symbol:Acbd6 "acyl-CoA binding domain conta... 255 7.0e-22 1
UNIPROTKB|A2VDR2 - symbol:ACBD6 "Acyl-CoA-binding domain-... 251 1.9e-21 1
UNIPROTKB|E1C483 - symbol:ACBD6 "Uncharacterized protein"... 249 3.0e-21 1
UNIPROTKB|Q9BR61 - symbol:ACBD6 "Acyl-CoA-binding domain-... 248 3.9e-21 1
UNIPROTKB|F1S683 - symbol:ACBD6 "Uncharacterized protein"... 244 1.0e-20 1
MGI|MGI:1919732 - symbol:Acbd6 "acyl-Coenzyme A binding d... 240 2.7e-20 1
FB|FBgn0064117 - symbol:CG33714 species:7227 "Drosophila ... 238 4.4e-20 1
UNIPROTKB|G3N0L6 - symbol:ACBD6 "Acyl-CoA-binding domain-... 203 2.6e-19 2
ZFIN|ZDB-GENE-030131-2810 - symbol:acbd6 "acyl-Coenzyme A... 230 3.3e-19 1
WB|WBGene00011731 - symbol:acbp-5 species:6239 "Caenorhab... 217 1.2e-17 1
FB|FBgn0064116 - symbol:CG33713 species:7227 "Drosophila ... 164 5.1e-17 2
FB|FBgn0037602 - symbol:CG8021 species:7227 "Drosophila m... 209 9.9e-17 1
GENEDB_PFALCIPARUM|PF10_0016 - symbol:PF10_0016 "acyl CoA... 184 6.8e-14 1
UNIPROTKB|Q8IK24 - symbol:ACBP "Acyl CoA binding protein,... 184 6.8e-14 1
TAIR|locus:2137380 - symbol:ACBP2 "AT4G27780" species:370... 192 8.0e-13 1
TAIR|locus:2178426 - symbol:ACBP1 "acyl-CoA binding prote... 191 8.9e-13 1
DICTYBASE|DDB_G0270658 - symbol:acbA "acyl-CoA binding pr... 174 8.9e-13 1
UNIPROTKB|K7EQ02 - symbol:DAZAP1 "DAZ-associated protein ... 170 2.5e-12 1
DICTYBASE|DDB_G0275027 - symbol:DDB_G0275027 "SRA stem-lo... 168 4.1e-12 1
UNIPROTKB|Q32P59 - symbol:SLIRP "SRA stem-loop-interactin... 168 4.1e-12 1
UNIPROTKB|C9JB63 - symbol:ECI2 "Enoyl-CoA delta isomerase... 168 4.1e-12 1
UNIPROTKB|F1LLU7 - symbol:ECI2 "Enoyl-CoA delta isomerase... 168 4.1e-12 1
UNIPROTKB|F8WAW4 - symbol:ECI2 "Enoyl-CoA delta isomerase... 168 4.1e-12 1
FB|FBgn0031992 - symbol:CG8498 species:7227 "Drosophila m... 167 5.3e-12 1
GENEDB_PFALCIPARUM|PF11_0197 - symbol:PF11_0197 "hypothet... 144 5.4e-12 2
UNIPROTKB|Q8IIH7 - symbol:PF11_0197 "Conserved Plasmodium... 144 5.4e-12 2
UNIPROTKB|F6QBK4 - symbol:ECI2 "Uncharacterized protein" ... 166 6.9e-12 1
UNIPROTKB|I3LKV0 - symbol:SLIRP "Uncharacterized protein"... 166 6.9e-12 1
UNIPROTKB|F1NIB4 - symbol:HNRNPAB "Uncharacterized protei... 165 8.9e-12 1
UNIPROTKB|H0YA96 - symbol:HNRNPD "Heterogeneous nuclear r... 165 8.9e-12 1
UNIPROTKB|D6RAF8 - symbol:HNRNPD "Heterogeneous nuclear r... 165 8.9e-12 1
UNIPROTKB|D6RBQ9 - symbol:HNRNPD "Heterogeneous nuclear r... 165 8.9e-12 1
ZFIN|ZDB-GENE-040426-2516 - symbol:zgc:77052 "zgc:77052" ... 181 9.3e-12 1
TAIR|locus:2007903 - symbol:AT1G17640 species:3702 "Arabi... 180 2.4e-11 1
DICTYBASE|DDB_G0287335 - symbol:DDB_G0287335 "RNA-binding... 161 2.5e-11 1
UNIPROTKB|D6RF44 - symbol:HNRNPD "Heterogeneous nuclear r... 160 3.2e-11 1
UNIPROTKB|J3KTC1 - symbol:MSI2 "RNA-binding protein Musas... 160 3.2e-11 1
RGD|1585290 - symbol:Slirp "SRA stem-loop interacting RNA... 160 3.2e-11 1
WB|WBGene00018949 - symbol:acbp-4 species:6239 "Caenorhab... 160 3.2e-11 1
UNIPROTKB|Q7ZYE9 - symbol:hnrnpab "Hnrpab-prov protein" s... 177 3.5e-11 1
UNIPROTKB|E2RSQ3 - symbol:SLIRP "Uncharacterized protein"... 158 5.3e-11 1
POMBASE|SPBC1539.06 - symbol:SPBC1539.06 "acyl-coenzyme A... 158 5.3e-11 1
WB|WBGene00007680 - symbol:maa-1 species:6239 "Caenorhabd... 171 6.6e-11 1
MGI|MGI:1916394 - symbol:Slirp "SRA stem-loop interacting... 157 6.8e-11 1
UNIPROTKB|Q83CD7 - symbol:CBU_1183 "Glycine-rich RNA-bind... 156 8.8e-11 1
TIGR_CMR|CBU_1183 - symbol:CBU_1183 "nucleic acid binding... 156 8.8e-11 1
UNIPROTKB|Q98SJ2 - symbol:dazap1 "DAZ-associated protein ... 174 1.1e-10 1
UNIPROTKB|I3LB68 - symbol:DAZAP1 "Uncharacterized protein... 175 1.2e-10 1
ZFIN|ZDB-GENE-030131-185 - symbol:hnrnpab "heterogeneous ... 174 1.2e-10 1
UNIPROTKB|E2R6E4 - symbol:DAZAP1 "Uncharacterized protein... 175 1.2e-10 1
UNIPROTKB|Q96EP5 - symbol:DAZAP1 "DAZ-associated protein ... 175 1.2e-10 1
MGI|MGI:1330294 - symbol:Hnrnpab "heterogeneous nuclear r... 170 1.3e-10 1
UNIPROTKB|Q9QX80 - symbol:Hnrnpab "Hnrpab protein" specie... 170 1.3e-10 1
TAIR|locus:2157702 - symbol:CP31B "chloroplast RNA-bindin... 170 1.4e-10 1
DICTYBASE|DDB_G0275971 - symbol:DDB_G0275971 "RNA recogni... 178 1.5e-10 1
TAIR|locus:2044370 - symbol:AT2G46780 species:3702 "Arabi... 172 1.5e-10 1
RGD|69255 - symbol:Hnrnpab "heterogeneous nuclear ribonuc... 170 1.7e-10 1
TAIR|locus:2011726 - symbol:AT1G76460 species:3702 "Arabi... 169 1.8e-10 1
UNIPROTKB|J3QKT5 - symbol:MSI2 "RNA-binding protein Musas... 153 1.9e-10 1
UNIPROTKB|F1PA19 - symbol:HNRNPAB "Uncharacterized protei... 167 2.0e-10 1
UNIPROTKB|D6R9P3 - symbol:HNRNPAB "Heterogeneous nuclear ... 168 2.2e-10 1
FB|FBgn0263396 - symbol:sqd "squid" species:7227 "Drosoph... 171 2.2e-10 1
UNIPROTKB|J9P972 - symbol:DAZAP1 "Uncharacterized protein... 166 2.2e-10 1
UNIPROTKB|D6RD18 - symbol:HNRNPAB "Heterogeneous nuclear ... 168 2.3e-10 1
UNIPROTKB|Q5T8D3 - symbol:ACBD5 "Acyl-CoA-binding domain-... 158 2.3e-10 2
UNIPROTKB|Q3ZC44 - symbol:HNRNPAB "Uncharacterized protei... 168 2.4e-10 1
UNIPROTKB|F1NDC3 - symbol:DBI "Acyl-CoA-binding protein" ... 152 2.4e-10 1
UNIPROTKB|Q9PRL8 - symbol:DBI "Acyl-CoA-binding protein" ... 152 2.4e-10 1
TAIR|locus:4515103555 - symbol:AT5G11412 species:3702 "Ar... 152 2.4e-10 1
TAIR|locus:2122009 - symbol:RBP31 "AT4G24770" species:370... 170 2.4e-10 1
UNIPROTKB|E9PTS0 - symbol:Hnrnpab "Protein Hnrnpab" speci... 170 2.5e-10 1
UNIPROTKB|Q9QX81 - symbol:Hnrnpab "RCG34663, isoform CRA_... 170 2.5e-10 1
ZFIN|ZDB-GENE-070212-1 - symbol:dazap1 "DAZ associated pr... 172 2.6e-10 1
FB|FBgn0260943 - symbol:Rbp6 "RNA-binding protein 6" spec... 171 2.6e-10 1
UNIPROTKB|F1NCW4 - symbol:HNRNPD "Uncharacterized protein... 165 3.0e-10 1
WB|WBGene00008224 - symbol:C50B8.1 species:6239 "Caenorha... 151 3.1e-10 1
UNIPROTKB|H0Y8G5 - symbol:HNRNPD "Heterogeneous nuclear r... 165 3.3e-10 1
RGD|1305280 - symbol:Dazap1 "DAZ associated protein 1" sp... 171 3.3e-10 1
MGI|MGI:1917498 - symbol:Dazap1 "DAZ associated protein 1... 171 3.4e-10 1
UNIPROTKB|F2Z3S1 - symbol:Dazap1 "Protein Dazap1" species... 171 3.4e-10 1
UNIPROTKB|F1NIB2 - symbol:HNRNPAB "Uncharacterized protei... 165 3.5e-10 1
CGD|CAL0003460 - symbol:orf19.5989 species:5476 "Candida ... 172 3.6e-10 1
UNIPROTKB|F1NF81 - symbol:DBI "Acyl-CoA-binding protein" ... 150 4.0e-10 1
UNIPROTKB|G3V4X6 - symbol:SLIRP "SRA stem-loop-interactin... 150 4.0e-10 1
UNIPROTKB|F1M3H8 - symbol:F1M3H8 "Uncharacterized protein... 150 4.0e-10 1
UNIPROTKB|D6RBZ0 - symbol:HNRNPAB "Heterogeneous nuclear ... 168 4.1e-10 1
TAIR|locus:2032120 - symbol:AT1G78260 species:3702 "Arabi... 166 4.2e-10 1
UNIPROTKB|Q5T8E0 - symbol:ACBD5 "Acyl-CoA-binding domain-... 158 4.3e-10 2
UNIPROTKB|Q99729 - symbol:HNRNPAB "Heterogeneous nuclear ... 168 4.3e-10 1
TAIR|locus:2037370 - symbol:AT1G20880 species:3702 "Arabi... 165 4.5e-10 1
WB|WBGene00016655 - symbol:acbp-1 species:6239 "Caenorhab... 149 5.2e-10 1
ZFIN|ZDB-GENE-050306-36 - symbol:zgc:110796 "zgc:110796" ... 149 5.2e-10 1
DICTYBASE|DDB_G0279695 - symbol:DDB_G0279695 "RNA recogni... 148 6.7e-10 1
UNIPROTKB|H0YJ40 - symbol:SLIRP "SRA stem-loop-interactin... 148 6.7e-10 1
UNIPROTKB|Q9GZT3 - symbol:SLIRP "SRA stem-loop-interactin... 148 6.7e-10 1
ZFIN|ZDB-GENE-040718-392 - symbol:zgc:92030 "zgc:92030" s... 168 6.8e-10 1
UNIPROTKB|O75521 - symbol:ECI2 "Enoyl-CoA delta isomerase... 168 6.9e-10 1
UNIPROTKB|B4DTC3 - symbol:HNRNPD "cDNA FLJ54150, highly s... 165 7.0e-10 1
WARNING: Descriptions of 1027 database sequences were not reported due to the
limiting value of parameter V = 100.
>DICTYBASE|DDB_G0290237 [details] [associations]
symbol:acbd6 "acyl-CoA-binding domain-containing
protein 6" species:44689 "Dictyostelium discoideum" [GO:0000062
"fatty-acyl-CoA binding" evidence=IEA] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS50088 PROSITE:PS51228 SMART:SM00248
dictyBase:DDB_G0290237 GO:GO:0005737 Gene3D:1.20.80.10
InterPro:IPR014352 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GenomeReviews:CM000154_GR GO:GO:0000062 eggNOG:COG4281
GO:GO:0008289 SUPFAM:SSF47027 PROSITE:PS00880 HSSP:O75521
EMBL:AAFI02000161 RefSeq:XP_635850.1 ProteinModelPortal:Q54GC8
EnsemblProtists:DDB0266382 GeneID:8627558 KEGG:ddi:DDB_G0290237
OMA:KIVAMNS Uniprot:Q54GC8
Length = 288
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 83/264 (31%), Positives = 145/264 (54%)
Query: 94 MEDRFNQACDYLPSLVKKLDS---STLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNA 150
+E++F A DY+ + KL + L Y YKQAT+G CN P +Y+ KSK+N+
Sbjct: 6 IENKFKLAVDYITNNSGKLSNIKNEEQLYLYCNYKQATIGDCNTKAPPFYDYIGKSKWNS 65
Query: 151 WNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQEEINWDWKPNQKAMSKYIALLNEVDASW 210
WNSL + K AM+ YI+L+ + GW+ + E + Q E++
Sbjct: 66 WNSLKGVEKIVAMNSYISLVNALSPGWDSNIKVE-----RATQSVFLNDEEF-KELEKK- 118
Query: 211 EDKEQEEINWDESQESGSKENEGQTKGWVN--VS--SMINDES--QLDDNEK-NIYEWAK 263
E +E+EE+ E +E+G + + ++K W+ +S S+++DE+ +L+ N K ++ W
Sbjct: 119 EKEEKEELKKLE-EENGGEIEKPKSK-WMGPVLSKFSLVDDETLEKLEKNTKQDLGYWVS 176
Query: 264 EGKLDMLVKQLTKLKDFNINQLDENGLNCLHWACDRGHLKVVQHLIEKCGADVNVTDSDG 323
++ + K++ K+ IN++DE+G L WACDRG+ ++ + LIE G++VNV D +G
Sbjct: 177 VNDIERVKKEIENDKNI-INEVDEDGRTALIWACDRGYFEIAKLLIEN-GSNVNVQDGEG 234
Query: 324 DYGLDYAKAIEHTDLIEYLVNSGS 347
L YA + ++ + L++ S
Sbjct: 235 MTPLHYAVVCDQFEICKLLLSQSS 258
>UNIPROTKB|F1PLQ8 [details] [associations]
symbol:ACBD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] InterPro:IPR002110 InterPro:IPR000582 Pfam:PF00887
PRINTS:PR00689 PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS51228
SMART:SM00248 Gene3D:1.20.80.10 InterPro:IPR014352
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0000062 SUPFAM:SSF47027 CTD:84320 OMA:QQHTTGK
GeneTree:ENSGT00690000102169 EMBL:AAEX03005119 EMBL:AAEX03005120
RefSeq:XP_537152.2 Ensembl:ENSCAFT00000020241 GeneID:480029
KEGG:cfa:480029 Uniprot:F1PLQ8
Length = 282
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 70/231 (30%), Positives = 116/231 (50%)
Query: 93 NMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWN 152
++ + F QA +L LV+ LL YA YKQ VG CN KPS+++ E K K+ AW
Sbjct: 41 SLAELFEQAAAHLQGLVQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWK 100
Query: 153 SLGQMAKSEAMSKYIALLKEVDAGWEDKEQEEINWDWKPNQKAMSKYIALLNEVDASWED 212
+LG + S+AM +YIA++K++D GW + E+ + N ++ L +
Sbjct: 101 ALGDSSPSQAMQEYIAVVKKLDPGWNPQSPEKKGKE--ANTGFGGPVVSSLYHEEII--- 155
Query: 213 KEQEEINWDESQESGSKENEGQTKGWVNVSSMINDESQLDDNEKNIYEWAKEGKLDMLVK 272
+E+++ +D +E+ + TK + S D + D+ + + WA + LV
Sbjct: 156 REEDKNIFDYCRENNI---DHVTKV---IRSKNVDVNMKDEEGRTLLHWACDRGHKELVT 209
Query: 273 QLTKLKDFNINQLDENGLNCLHWACDRGHLKVVQHLIEKCGADVNVTDSDG 323
L + K +IN D+ G LH+A L +V+ L++ GAD + D DG
Sbjct: 210 VLLRYKA-DINCQDDEGQTALHYAAACEFLDIVELLLQS-GADPTLRDQDG 258
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 60/175 (34%), Positives = 99/175 (56%)
Query: 177 WEDKEQEEINW----DWKPNQKAMSKYIALLNEVDASWEDKEQEEINWDESQESGSKENE 232
+E K++ E W D P+Q AM +YIA++ ++D W + E+ G + N
Sbjct: 90 FEGKQKWEA-WKALGDSSPSQ-AMQEYIAVVKKLDPGWNPQSPEK--------KGKEANT 139
Query: 233 GQTKGWVNVSSMINDESQLDDNEKNIYEWAKEGKLDMLVKQLTKLKDFNINQLDENGLNC 292
G G VSS+ ++E + + +KNI+++ +E +D + K + + K+ ++N DE G
Sbjct: 140 GF--GGPVVSSLYHEEI-IREEDKNIFDYCRENNIDHVTKVI-RSKNVDVNMKDEEGRTL 195
Query: 293 LHWACDRGHLKVVQHLIEKCGADVNVTDSDGDYGLDYAKAIEHTDLIEYLVNSGS 347
LHWACDRGH ++V L+ + AD+N D +G L YA A E D++E L+ SG+
Sbjct: 196 LHWACDRGHKELVTVLL-RYKADINCQDDEGQTALHYAAACEFLDIVELLLQSGA 249
>RGD|1305030 [details] [associations]
symbol:Acbd6 "acyl-CoA binding domain containing 6"
species:10116 "Rattus norvegicus" [GO:0000062 "fatty-acyl-CoA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0008289 "lipid
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR002110 InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS51228 SMART:SM00248
RGD:1305030 GO:GO:0005634 GO:GO:0005737 Gene3D:1.20.80.10
InterPro:IPR014352 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0000062 GO:GO:0008289 SUPFAM:SSF47027 PROSITE:PS00880
CTD:84320 HOGENOM:HOG000241133 HOVERGEN:HBG080775 OrthoDB:EOG4THVTS
OMA:QQHTTGK GeneTree:ENSGT00690000102169 EMBL:BC086598
IPI:IPI00371505 RefSeq:NP_001011906.1 UniGene:Rn.27349
ProteinModelPortal:Q5RJK8 SMR:Q5RJK8 PRIDE:Q5RJK8
Ensembl:ENSRNOT00000004772 GeneID:289125 KEGG:rno:289125
UCSC:RGD:1305030 InParanoid:Q5RJK8 NextBio:629258
Genevestigator:Q5RJK8 GermOnline:ENSRNOG00000003550 Uniprot:Q5RJK8
Length = 282
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 63/175 (36%), Positives = 102/175 (58%)
Query: 177 WEDKEQEEINW----DWKPNQKAMSKYIALLNEVDASWEDKEQEEINWDESQESGSKENE 232
+E K++ E W D P+Q AM +YIA + ++D W N S++ G KE
Sbjct: 90 FEGKQKWEA-WKALGDSSPSQ-AMQEYIAAVKKLDPGW--------NPQVSEKKG-KEGS 138
Query: 233 GQTKGWVNVSSMINDESQLDDNEKNIYEWAKEGKLDMLVKQLTKLKDFNINQLDENGLNC 292
G V VSS+ ++E+ + + +KNI+++ +E +D + K + K K ++N DE G
Sbjct: 139 SGFGGPV-VSSLYHEET-IREEDKNIFDYCRENNIDHITKAI-KSKTVDVNMTDEEGRAL 195
Query: 293 LHWACDRGHLKVVQHLIEKCGADVNVTDSDGDYGLDYAKAIEHTDLIEYLVNSGS 347
LHWACDRGH ++V+ L++ C A +N D++G L YA A E +D++E L+ SG+
Sbjct: 196 LHWACDRGHKELVKVLLQ-CEAGINCQDNEGQTALHYAAACEFSDIVELLLQSGA 249
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 70/233 (30%), Positives = 112/233 (48%)
Query: 93 NMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWN 152
++ + F +A ++ LV+ LL YA YKQ VG CNI KP++++ E K K+ AW
Sbjct: 41 SLAELFEKAAAHVQGLVQVASREQLLYLYARYKQVKVGNCNIPKPNFFDFEGKQKWEAWK 100
Query: 153 SLGQMAKSEAMSKYIALLKEVDAGWEDKEQEEINWDWKPNQKAMSKYI--ALLNEVDASW 210
+LG + S+AM +YIA +K++D GW + E+ K + +L +E
Sbjct: 101 ALGDSSPSQAMQEYIAAVKKLDPGWNPQVSEKKG---KEGSSGFGGPVVSSLYHEETIRE 157
Query: 211 EDKEQEEINWDESQESGSKENEGQTKGWVNVSSMINDESQLDDNEKNIYEWAKEGKLDML 270
EDK +D +E+ + TK + S D + D+ + + WA + L
Sbjct: 158 EDKNI----FDYCRENNI---DHITKA---IKSKTVDVNMTDEEGRALLHWACDRGHKEL 207
Query: 271 VKQLTKLKDFNINQLDENGLNCLHWACDRGHLKVVQHLIEKCGADVNVTDSDG 323
VK L + + IN D G LH+A +V+ L++ GAD + D DG
Sbjct: 208 VKVLLQC-EAGINCQDNEGQTALHYAAACEFSDIVELLLQS-GADPTLRDQDG 258
>UNIPROTKB|A2VDR2 [details] [associations]
symbol:ACBD6 "Acyl-CoA-binding domain-containing protein 6"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS51228 SMART:SM00248
GO:GO:0005634 GO:GO:0005737 Gene3D:1.20.80.10 InterPro:IPR014352
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0000062 GO:GO:0008289 SUPFAM:SSF47027
PROSITE:PS00880 EMBL:BC133362 IPI:IPI00693816 RefSeq:NP_001077252.1
UniGene:Bt.17458 ProteinModelPortal:A2VDR2 SMR:A2VDR2 GeneID:618245
KEGG:bta:618245 CTD:84320 eggNOG:KOG0817 HOGENOM:HOG000241133
HOVERGEN:HBG080775 OrthoDB:EOG4THVTS NextBio:20901081
Uniprot:A2VDR2
Length = 282
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 61/175 (34%), Positives = 101/175 (57%)
Query: 177 WEDKEQEEINW----DWKPNQKAMSKYIALLNEVDASWEDKEQEEINWDESQESGSKENE 232
+E K++ E W D P+Q AM +YIA++ ++D SW + E+ G + N
Sbjct: 90 FEGKQKWEA-WKALGDSSPSQ-AMQEYIAVVKKLDPSWNPQSPEK--------KGKEANT 139
Query: 233 GQTKGWVNVSSMINDESQLDDNEKNIYEWAKEGKLDMLVKQLTKLKDFNINQLDENGLNC 292
G G VSS+ ++E + + +K+I+++ +E +D + K + K K+ ++N DE G
Sbjct: 140 GF--GGPVVSSLYHEEI-IREEDKDIFDYCRENNIDHITKVI-KTKNMDVNMKDEEGRTL 195
Query: 293 LHWACDRGHLKVVQHLIEKCGADVNVTDSDGDYGLDYAKAIEHTDLIEYLVNSGS 347
LHWACDRGH ++V L++ AD+N D++G L YA A E D++E L+ SG+
Sbjct: 196 LHWACDRGHKELVTVLLQY-RADINCQDNEGQTALHYAAACEFLDIVELLLQSGA 249
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 69/233 (29%), Positives = 117/233 (50%)
Query: 91 AENMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNA 150
+ ++ + F +A ++L LV+ LL YA YKQ VG CN KPS+++ E K K+ A
Sbjct: 39 SRSLPELFEKAAEHLQGLVQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEA 98
Query: 151 WNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQEEINWDWKPNQKAMSKYIALLNEVDASW 210
W +LG + S+AM +YIA++K++D W + E+ + N ++ L +
Sbjct: 99 WKALGDSSPSQAMQEYIAVVKKLDPSWNPQSPEKKGKE--ANTGFGGPVVSSLYHEEIIR 156
Query: 211 EDKEQEEINWDESQESGSKENEGQTKGWVNVSSMINDESQLDDNEKNIYEWAKEGKLDML 270
E E ++I +D +E+ + TK + +M D + D+ + + WA + L
Sbjct: 157 E--EDKDI-FDYCRENNI---DHITKV-IKTKNM--DVNMKDEEGRTLLHWACDRGHKEL 207
Query: 271 VKQLTKLKDFNINQLDENGLNCLHWACDRGHLKVVQHLIEKCGADVNVTDSDG 323
V L + + +IN D G LH+A L +V+ L++ GAD + D DG
Sbjct: 208 VTVLLQYRA-DINCQDNEGQTALHYAAACEFLDIVELLLQS-GADPTLRDQDG 258
>UNIPROTKB|E1C483 [details] [associations]
symbol:ACBD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR002110 InterPro:IPR000582 Pfam:PF00887
PRINTS:PR00689 PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS51228
SMART:SM00248 GO:GO:0005634 GO:GO:0005737 Gene3D:1.20.80.10
InterPro:IPR014352 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0000062
SUPFAM:SSF47027 OMA:QQHTTGK GeneTree:ENSGT00690000102169
EMBL:AADN02034132 IPI:IPI00573846 ProteinModelPortal:E1C483
Ensembl:ENSGALT00000006255 Uniprot:E1C483
Length = 268
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 61/175 (34%), Positives = 99/175 (56%)
Query: 177 WEDKEQEEINW----DWKPNQKAMSKYIALLNEVDASWEDKEQEEINWDESQESGSKENE 232
+E K++ E W D P+Q AM +Y+A + ++D SW ++ E KE++
Sbjct: 76 FEGKQKWEA-WKALGDTSPHQ-AMQEYVATVKKLDPSWNP---------QTTEKRGKESK 124
Query: 233 GQTKGWVNVSSMINDESQLDDNEKNIYEWAKEGKLDMLVKQLTKLKDFNINQLDENGLNC 292
G V VSS+ +E+ + + +KNI+++ +E +D + K + K ++N DE G
Sbjct: 125 TAFGGPV-VSSLYQEET-IREEDKNIFDYCRENNIDYVTKAIQS-KKVDVNVADEEGRAL 181
Query: 293 LHWACDRGHLKVVQHLIEKCGADVNVTDSDGDYGLDYAKAIEHTDLIEYLVNSGS 347
LHWACDRGH ++V L++ ADVN D +G L YA A E +D++E L+ SG+
Sbjct: 182 LHWACDRGHKELVSVLLQHA-ADVNSQDGEGQTALHYASACEFSDIVELLLQSGA 235
Score = 228 (85.3 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 71/252 (28%), Positives = 116/252 (46%)
Query: 75 EGSRLSIQPSDSHNRMAENMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNI 134
EGS S P S +++ F QA + LP+L+ LL YA YKQ G CN
Sbjct: 13 EGSSGSAGPDPSDRQLSA----LFEQAAERLPALLPNASKEQLLYLYARYKQVKFGTCNT 68
Query: 135 DKPSWYNMEAKSKYNAWNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQEEINWDWKPNQK 194
KP +++ E K K+ AW +LG + +AM +Y+A +K++D W + E+ K ++
Sbjct: 69 PKPGFFDFEGKQKWEAWKALGDTSPHQAMQEYVATVKKLDPSWNPQTTEKRG---KESKT 125
Query: 195 AMSKYI--ALLNEVDASWEDKEQEEINWDESQESGSKENEGQTKGWVNVSSMINDESQLD 252
A + +L E EDK +D +E+ + TK + S D + D
Sbjct: 126 AFGGPVVSSLYQEETIREEDKNI----FDYCRENNI---DYVTKA---IQSKKVDVNVAD 175
Query: 253 DNEKNIYEWAKE-GKLDMLVKQLTKLKDFNINQLDENGLNCLHWACDRGHLKVVQHLIEK 311
+ + + WA + G +++ L D +N D G LH+A +V+ L++
Sbjct: 176 EEGRALLHWACDRGHKELVSVLLQHAAD--VNSQDGEGQTALHYASACEFSDIVELLLQS 233
Query: 312 CGADVNVTDSDG 323
GAD + D +G
Sbjct: 234 -GADPTLRDKEG 244
>UNIPROTKB|Q9BR61 [details] [associations]
symbol:ACBD6 "Acyl-CoA-binding domain-containing protein 6"
species:9606 "Homo sapiens" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR002110
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PRINTS:PR01415
PROSITE:PS50088 PROSITE:PS51228 SMART:SM00248 GO:GO:0005634
GO:GO:0005737 Gene3D:1.20.80.10 InterPro:IPR014352 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0000062 GO:GO:0008289 SUPFAM:SSF47027
PROSITE:PS00880 CTD:84320 HOGENOM:HOG000241133 HOVERGEN:HBG080775
OrthoDB:EOG4THVTS EMBL:AL445469 EMBL:AL139141 EMBL:AL358354
EMBL:BC006505 IPI:IPI00031680 RefSeq:NP_115736.1 UniGene:Hs.200051
PDB:2COP PDBsum:2COP ProteinModelPortal:Q9BR61 SMR:Q9BR61
IntAct:Q9BR61 STRING:Q9BR61 PhosphoSite:Q9BR61 DMDM:74762703
PaxDb:Q9BR61 PRIDE:Q9BR61 Ensembl:ENST00000367595 GeneID:84320
KEGG:hsa:84320 UCSC:uc001gog.3 GeneCards:GC01M180244
HGNC:HGNC:23339 HPA:HPA028179 neXtProt:NX_Q9BR61
PharmGKB:PA134925459 InParanoid:Q9BR61 OMA:QQHTTGK PhylomeDB:Q9BR61
EvolutionaryTrace:Q9BR61 GenomeRNAi:84320 NextBio:74044 Bgee:Q9BR61
CleanEx:HS_ACBD6 Genevestigator:Q9BR61 GermOnline:ENSG00000135847
Uniprot:Q9BR61
Length = 282
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 60/175 (34%), Positives = 101/175 (57%)
Query: 177 WEDKEQEEINW----DWKPNQKAMSKYIALLNEVDASWEDKEQEEINWDESQESGSKENE 232
+E K++ E W D P+Q AM +YIA++ ++D W + E+ G + N
Sbjct: 90 FEGKQKWEA-WKALGDSSPSQ-AMQEYIAVVKKLDPGWNPQIPEK--------KGKEANT 139
Query: 233 GQTKGWVNVSSMINDESQLDDNEKNIYEWAKEGKLDMLVKQLTKLKDFNINQLDENGLNC 292
G G +SS+ ++E+ + + +KNI+++ +E +D + K + K K+ ++N DE G
Sbjct: 140 GF--GGPVISSLYHEET-IREEDKNIFDYCRENNIDHITKAI-KSKNVDVNVKDEEGRAL 195
Query: 293 LHWACDRGHLKVVQHLIEKCGADVNVTDSDGDYGLDYAKAIEHTDLIEYLVNSGS 347
LHWACDRGH ++V L++ AD+N D++G L YA A E D++E L+ SG+
Sbjct: 196 LHWACDRGHKELVTVLLQH-RADINCQDNEGQTALHYASACEFLDIVELLLQSGA 249
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 67/231 (29%), Positives = 113/231 (48%)
Query: 94 MEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNS 153
+ + F +A +L L++ LL YA YKQ VG CN KPS+++ E K K+ AW +
Sbjct: 42 LAELFEKAAAHLQGLIQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKA 101
Query: 154 LGQMAKSEAMSKYIALLKEVDAGWEDKEQEEINWDWKPNQKAMSKYIALLNEVDASWEDK 213
LG + S+AM +YIA++K++D GW + E+ + N I+ L + +
Sbjct: 102 LGDSSPSQAMQEYIAVVKKLDPGWNPQIPEKKGKE--ANTGFGGPVISSLYHEETI---R 156
Query: 214 EQEEINWDESQESGSKENEGQTKGWVNVSSMINDESQLDDNEKNIYEWAKE-GKLDMLVK 272
E+++ +D +E+ + TK + S D + D+ + + WA + G +++
Sbjct: 157 EEDKNIFDYCRENNI---DHITKA---IKSKNVDVNVKDEEGRALLHWACDRGHKELVTV 210
Query: 273 QLTKLKDFNINQLDENGLNCLHWACDRGHLKVVQHLIEKCGADVNVTDSDG 323
L D N D G LH+A L +V+ L++ GAD + D DG
Sbjct: 211 LLQHRADINCQ--DNEGQTALHYASACEFLDIVELLLQS-GADPTLRDQDG 258
>UNIPROTKB|F1S683 [details] [associations]
symbol:ACBD6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS51228 SMART:SM00248
GO:GO:0005634 GO:GO:0005737 Gene3D:1.20.80.10 InterPro:IPR014352
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0000062 SUPFAM:SSF47027 OMA:QQHTTGK
GeneTree:ENSGT00690000102169 EMBL:FP476046 EMBL:AEMK01193833
EMBL:CU915735 EMBL:FP102326 RefSeq:XP_003130396.2
Ensembl:ENSSSCT00000016923 GeneID:100525243 KEGG:ssc:100525243
Uniprot:F1S683
Length = 282
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 71/249 (28%), Positives = 121/249 (48%)
Query: 76 GSRLSIQPSDSHNRMAENMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNID 135
G S+Q ++ + ++ + F +A +L LV+ LL YA YKQ VG CN
Sbjct: 26 GDAESLQSPETE--ASRSLTELFEKAAAHLQGLVQVASREQLLYLYARYKQVKVGNCNTP 83
Query: 136 KPSWYNMEAKSKYNAWNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQEEINWDWKPNQKA 195
KPS+++ E K K+ AW +LG + S+AM +YIA++K++D W + E+ + N
Sbjct: 84 KPSFFDFEGKQKWEAWKALGDSSPSQAMQEYIAVVKKLDPDWNPQLPEKKGKE--TNTGF 141
Query: 196 MSKYIALLNEVDASWEDKEQEEINWDESQESGSKENEGQTKGWVNVSSMINDESQLDDNE 255
++ L + +E+++ +D +E+ + TK + S D + D+
Sbjct: 142 GGPVVSSLYHEEII---REEDKNIFDYCRENNI---DHITKV---IKSKNVDVNMKDEEG 192
Query: 256 KNIYEWAKE-GKLDMLVKQLTKLKDFNINQLDENGLNCLHWACDRGHLKVVQHLIEKCGA 314
+ + WA + G D++ L D IN D G LH+A L +V+ L++ GA
Sbjct: 193 RALLHWACDRGHKDLVTVLLQYRAD--INSQDNEGQTALHYAAACEFLDIVELLLQ-AGA 249
Query: 315 DVNVTDSDG 323
D + D DG
Sbjct: 250 DATLRDQDG 258
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 60/175 (34%), Positives = 99/175 (56%)
Query: 177 WEDKEQEEINW----DWKPNQKAMSKYIALLNEVDASWEDKEQEEINWDESQESGSKENE 232
+E K++ E W D P+Q AM +YIA++ ++D W + E+ G + N
Sbjct: 90 FEGKQKWEA-WKALGDSSPSQ-AMQEYIAVVKKLDPDWNPQLPEK--------KGKETNT 139
Query: 233 GQTKGWVNVSSMINDESQLDDNEKNIYEWAKEGKLDMLVKQLTKLKDFNINQLDENGLNC 292
G G VSS+ ++E + + +KNI+++ +E +D + K + K K+ ++N DE G
Sbjct: 140 GF--GGPVVSSLYHEEI-IREEDKNIFDYCRENNIDHITKVI-KSKNVDVNMKDEEGRAL 195
Query: 293 LHWACDRGHLKVVQHLIEKCGADVNVTDSDGDYGLDYAKAIEHTDLIEYLVNSGS 347
LHWACDRGH +V L++ AD+N D++G L YA A E D++E L+ +G+
Sbjct: 196 LHWACDRGHKDLVTVLLQY-RADINSQDNEGQTALHYAAACEFLDIVELLLQAGA 249
>MGI|MGI:1919732 [details] [associations]
symbol:Acbd6 "acyl-Coenzyme A binding domain containing 6"
species:10090 "Mus musculus" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008289 "lipid binding"
evidence=IEA] InterPro:IPR002110 InterPro:IPR000582 Pfam:PF00887
PRINTS:PR00689 PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS51228
SMART:SM00248 MGI:MGI:1919732 GO:GO:0005634 GO:GO:0005737
Gene3D:1.20.80.10 InterPro:IPR014352 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0000062 GO:GO:0008289 SUPFAM:SSF47027
PROSITE:PS00880 CTD:84320 HOGENOM:HOG000241133 HOVERGEN:HBG080775
OrthoDB:EOG4THVTS OMA:QQHTTGK EMBL:AK002470 EMBL:AK011781
EMBL:AK165836 EMBL:BC028537 EMBL:BC061029 IPI:IPI00121355
IPI:IPI00132083 IPI:IPI00652003 RefSeq:NP_001139253.1
RefSeq:NP_080959.1 RefSeq:NP_082526.2 UniGene:Mm.288249
ProteinModelPortal:Q9D061 SMR:Q9D061 PhosphoSite:Q9D061
PaxDb:Q9D061 PRIDE:Q9D061 Ensembl:ENSMUST00000035560
Ensembl:ENSMUST00000080138 Ensembl:ENSMUST00000097529 GeneID:72482
KEGG:mmu:72482 UCSC:uc007dbk.2 UCSC:uc007dbl.2
GeneTree:ENSGT00690000102169 InParanoid:Q9D061 NextBio:336322
Bgee:Q9D061 CleanEx:MM_ACBD6 Genevestigator:Q9D061
GermOnline:ENSMUSG00000033701 Uniprot:Q9D061
Length = 282
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 62/175 (35%), Positives = 100/175 (57%)
Query: 177 WEDKEQEEINW----DWKPNQKAMSKYIALLNEVDASWEDKEQEEINWDESQESGSKENE 232
+E K++ E W D P+Q AM +YIA + ++D W N S++ G KE
Sbjct: 90 FEGKQKWEA-WKALGDSSPSQ-AMQEYIAAVKKLDPGW--------NPQVSEKKG-KEGS 138
Query: 233 GQTKGWVNVSSMINDESQLDDNEKNIYEWAKEGKLDMLVKQLTKLKDFNINQLDENGLNC 292
G V VSS+ ++E+ + + +KNI+++ +E +D + K + K K ++N DE G
Sbjct: 139 SGFGGPV-VSSLYHEET-IREEDKNIFDYCRENNIDHIAKAI-KSKAADVNMTDEEGRAL 195
Query: 293 LHWACDRGHLKVVQHLIEKCGADVNVTDSDGDYGLDYAKAIEHTDLIEYLVNSGS 347
LHWACDRGH ++V+ L++ A +N D++G L YA A E D++E L+ SG+
Sbjct: 196 LHWACDRGHKELVKVLLQY-EAGINCQDNEGQTALHYAAACEFLDIVELLLQSGA 249
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 71/250 (28%), Positives = 116/250 (46%)
Query: 76 GSRLSIQPSDSHNRMAENMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNID 135
G S Q ++ ++ + F +A ++ LV+ LL YA +KQ VG CN
Sbjct: 26 GDMESFQTPEAEG--TRSLAELFEKAAAHVQGLVQVASREQLLYLYARFKQVKVGNCNTP 83
Query: 136 KPSWYNMEAKSKYNAWNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQEEINWDWKPNQKA 195
KP++++ E K K+ AW +LG + S+AM +YIA +K++D GW + E+ K
Sbjct: 84 KPNFFDFEGKQKWEAWKALGDSSPSQAMQEYIAAVKKLDPGWNPQVSEKKG---KEGSSG 140
Query: 196 MSKYI--ALLNEVDASWEDKEQEEINWDESQESGSKENEGQTKGWVNVSSMINDESQLDD 253
+ +L +E EDK +D +E+ + K + S D + D+
Sbjct: 141 FGGPVVSSLYHEETIREEDKNI----FDYCRENNI---DHIAKA---IKSKAADVNMTDE 190
Query: 254 NEKNIYEWAKEGKLDMLVKQLTKLKDFNINQLDENGLNCLHWACDRGHLKVVQHLIEKCG 313
+ + WA + LVK L + + IN D G LH+A L +V+ L++ G
Sbjct: 191 EGRALLHWACDRGHKELVKVLLQY-EAGINCQDNEGQTALHYAAACEFLDIVELLLQS-G 248
Query: 314 ADVNVTDSDG 323
AD + D DG
Sbjct: 249 ADPTLRDQDG 258
>FB|FBgn0064117 [details] [associations]
symbol:CG33714 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
EMBL:AE014298 GO:GO:0003729 Gene3D:3.30.70.330
GeneTree:ENSGT00390000008624 RefSeq:NP_001027083.1
RefSeq:NP_001027084.1 UniGene:Dm.234 SMR:Q0KHQ1 STRING:Q0KHQ1
EnsemblMetazoa:FBtr0091703 EnsemblMetazoa:FBtr0091704
GeneID:3772560 KEGG:dme:Dmel_CG33714 UCSC:CG33714-RA
FlyBase:FBgn0064117 InParanoid:Q0KHQ1 OMA:GHRELRN OrthoDB:EOG4X0K91
NextBio:854180 Uniprot:Q0KHQ1
Length = 90
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 40/79 (50%), Positives = 63/79 (79%)
Query: 6 RQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDK 65
+ +++IFVGNLPWTV H EL+ +F E+G++++A+V+FDK TG SKG+GFV+F + A++K
Sbjct: 12 KSVHRIFVGNLPWTVGHQELRGYFREFGRVVSANVIFDKRTGCSKGYGFVSFNSLTALEK 71
Query: 66 VFSTDSHVLEGSRLSIQPS 84
+ + H+LEG+ L+IQ S
Sbjct: 72 IENEQKHILEGNYLNIQKS 90
>UNIPROTKB|G3N0L6 [details] [associations]
symbol:ACBD6 "Acyl-CoA-binding domain-containing protein 6"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000062 "fatty-acyl-CoA
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR000582
Pfam:PF00887 PRINTS:PR00689 PROSITE:PS50088 PROSITE:PS51228
SMART:SM00248 GO:GO:0005634 GO:GO:0005737 Gene3D:1.20.80.10
InterPro:IPR014352 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0000062
SUPFAM:SSF47027 GeneTree:ENSGT00690000102169 EMBL:DAAA02043495
EMBL:DAAA02043496 Ensembl:ENSBTAT00000063346 OMA:MDVNMKD
Uniprot:G3N0L6
Length = 221
Score = 203 (76.5 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 36/94 (38%), Positives = 58/94 (61%)
Query: 91 AENMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNA 150
+ ++ + F +A ++L LV+ LL YA YKQ VG CN KPS+++ E K K+ A
Sbjct: 39 SRSLPELFEKAAEHLQGLVQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEA 98
Query: 151 WNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQEE 184
W +LG + S+AM +YIA++K++D W + E+
Sbjct: 99 WKALGDSSPSQAMQEYIAVVKKLDPSWNPQSPEK 132
Score = 190 (71.9 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 49/145 (33%), Positives = 83/145 (57%)
Query: 177 WEDKEQEEINW----DWKPNQKAMSKYIALLNEVDASWEDKEQEEINWDESQESGSKENE 232
+E K++ E W D P+Q AM +YIA++ ++D SW + E+ G + N
Sbjct: 90 FEGKQKWEA-WKALGDSSPSQ-AMQEYIAVVKKLDPSWNPQSPEK--------KGKEANT 139
Query: 233 GQTKGWVNVSSMINDESQLDDNEKNIYEWAKEGKLDMLVKQLTKLKDFNINQLDENGLNC 292
G G VSS+ ++E + + +K+I+++ +E +D + K + K K+ ++N DE G
Sbjct: 140 GF--GGPVVSSLYHEEI-IREEDKDIFDYCRENNIDHITKVI-KTKNMDVNMKDEEGRTL 195
Query: 293 LHWACDRGHLKVVQHLIEKCGADVN 317
LHWACDRGH ++V L++ AD+N
Sbjct: 196 LHWACDRGHKELVTVLLQY-RADIN 219
Score = 48 (22.0 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 297 CDRGHLKVVQHLIEKCGADVNVTDSDGDYGLDYAKAIEHTDLIEYLV 343
C ++ + +I+ DVN+ D +G L +A H +L+ L+
Sbjct: 166 CRENNIDHITKVIKTKNMDVNMKDEEGRTLLHWACDRGHKELVTVLL 212
>ZFIN|ZDB-GENE-030131-2810 [details] [associations]
symbol:acbd6 "acyl-Coenzyme A binding domain
containing 6" species:7955 "Danio rerio" [GO:0000062
"fatty-acyl-CoA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS51228 SMART:SM00248
ZFIN:ZDB-GENE-030131-2810 GO:GO:0005737 Gene3D:1.20.80.10
InterPro:IPR014352 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0000062 GO:GO:0008289 SUPFAM:SSF47027 PROSITE:PS00880
CTD:84320 HOGENOM:HOG000241133 HOVERGEN:HBG080775 OrthoDB:EOG4THVTS
EMBL:BC097158 IPI:IPI00486279 RefSeq:NP_001020626.1
UniGene:Dr.78504 ProteinModelPortal:Q4V8X4 SMR:Q4V8X4 PRIDE:Q4V8X4
GeneID:324090 KEGG:dre:324090 InParanoid:Q4V8X4 NextBio:20808585
Uniprot:Q4V8X4
Length = 300
Score = 230 (86.0 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 72/267 (26%), Positives = 129/267 (48%)
Query: 85 DSHNRM-AENMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNME 143
D+ R+ ++E+ F A D + LV+ LL YA +KQ VG+CN KP +++ E
Sbjct: 50 DASARLEGADLENEFESAADRVRDLVQTASREQLLYLYARFKQVKVGKCNTSKPGFFDFE 109
Query: 144 AKSKYNAWNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQEEINWDWKPNQKAMSKYIALL 203
+ K++AW LG M+ +AM +Y+ + +D K E + + + ++ L
Sbjct: 110 GQRKWSAWKQLGDMSAEQAMQEYVTCVHALDPEGSQKSSERRGGEKRTGFGGPA--VSSL 167
Query: 204 NEVDASWEDKEQEEINWDESQESGSKEN--EGQTKGWVNVSSMINDESQLDDNEKNIYEW 261
+ E+K +EE D++ +EN E +K +SS D + D+ + + W
Sbjct: 168 YQ-----EEKIREE---DKNIFDYCRENNIEHVSKA---ISSKTVDVNTRDEEGRALLHW 216
Query: 262 AKE-GKLDMLVKQLTKLKDFNINQLDENGLNCLHWACDRGHLKVVQHLIEKCGADVNVTD 320
A + G D LV L + + +IN D+ G LH+A ++V+ L+ K GAD ++ D
Sbjct: 217 ACDRGHKD-LVSLLLQ-NNADINSQDDEGQTALHYASACEFAEIVELLL-KAGADPSIKD 273
Query: 321 SDGDYGLDYAKAIEHTDLI-EYLVNSG 346
+G + ++ + L+ +Y G
Sbjct: 274 QEGSLPEEVTESSAISSLLRQYTAPKG 300
Score = 212 (79.7 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 53/178 (29%), Positives = 93/178 (52%)
Query: 176 GWEDKEQEEINWD-WKP-----NQKAMSKYIALLNEVDASWEDKEQEEINWDESQESGSK 229
G+ D E + W WK ++AM +Y+ ++ +D K S+ G +
Sbjct: 104 GFFDFEGQR-KWSAWKQLGDMSAEQAMQEYVTCVHALDPEGSQKS--------SERRGGE 154
Query: 230 ENEGQTKGWVNVSSMINDESQLDDNEKNIYEWAKEGKLDMLVKQLTKLKDFNINQLDENG 289
+ G G VSS+ +E ++ + +KNI+++ +E ++ + K ++ K ++N DE G
Sbjct: 155 KRTGF--GGPAVSSLYQEE-KIREEDKNIFDYCRENNIEHVSKAISS-KTVDVNTRDEEG 210
Query: 290 LNCLHWACDRGHLKVVQHLIEKCGADVNVTDSDGDYGLDYAKAIEHTDLIEYLVNSGS 347
LHWACDRGH +V L++ AD+N D +G L YA A E +++E L+ +G+
Sbjct: 211 RALLHWACDRGHKDLVSLLLQN-NADINSQDDEGQTALHYASACEFAEIVELLLKAGA 267
>WB|WBGene00011731 [details] [associations]
symbol:acbp-5 species:6239 "Caenorhabditis elegans"
[GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000582 Pfam:PF00887 PROSITE:PS50088
PROSITE:PS51228 SMART:SM00248 Gene3D:1.20.80.10 InterPro:IPR014352
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0000062 SUPFAM:SSF47027 OMA:QQHTTGK
GeneTree:ENSGT00690000102169 HSSP:Q8BGS2 EMBL:Z81120
eggNOG:NOG314885 PIR:T24859 RefSeq:NP_499817.2
ProteinModelPortal:Q9XVJ0 SMR:Q9XVJ0 STRING:Q9XVJ0 PaxDb:Q9XVJ0
EnsemblMetazoa:T12D8.3.1 EnsemblMetazoa:T12D8.3.2 GeneID:176800
KEGG:cel:CELE_T12D8.3 UCSC:T12D8.3 CTD:176800 WormBase:T12D8.3
HOGENOM:HOG000021252 InParanoid:Q9XVJ0 NextBio:894054
Uniprot:Q9XVJ0
Length = 274
Score = 217 (81.4 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 63/234 (26%), Positives = 112/234 (47%)
Query: 94 MEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDK-PSWYNMEAKSKYNAWN 152
+E +F+ A LP + K+D T+LKFY LYKQA G + K P W+ A+ K+N+W
Sbjct: 28 LEAKFDAATTRLPGFLTKIDQKTILKFYGLYKQAVEGPADSKKGPYWFETVARKKFNSWL 87
Query: 153 SLGQMAKSEAMSKYIALLKEVDAGWE-DKEQEEINWDWKPNQKAMSKYIALLNEVDASWE 211
+ QM++S AM Y L+ ++D W+ D E + + W+ M + + DA
Sbjct: 88 ANSQMSRSRAMEAYCELMAQLDTSWDPDAETVKKSGLWEKMPSTMGVIEPEMFD-DAVVH 146
Query: 212 DKEQEEINWDESQESGSKENEGQTKGWV--NVSSMINDESQLDDNEKNIYEWAKEGKLDM 269
+ E ++ + + ++ T + N +I + Q WA + D
Sbjct: 147 PPTKLETETEKKWFAAMRVSDIDTMRTLLRNEPEIIEAKDQY--LAMTALLWATDLGCDP 204
Query: 270 LVKQLTKLKDFNINQLDENGLNCLHWACDRGHLKVVQHLIEKCGADVNVTDSDG 323
+V+ L + + ++N +D LH+A + H ++ L+ + GAD + D+DG
Sbjct: 205 VVQFLIE-NNVDVNAVDGCLQTALHFAA-QCHRPLLAELLLQAGADRSALDADG 256
>FB|FBgn0064116 [details] [associations]
symbol:CG33713 species:7227 "Drosophila melanogaster"
[GO:0000062 "fatty-acyl-CoA binding" evidence=ISS]
InterPro:IPR002110 InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS50088 PROSITE:PS51228 SMART:SM00248 Gene3D:1.20.80.10
InterPro:IPR014352 EMBL:AE014298 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0000062 SUPFAM:SSF47027 HSSP:P07107 OMA:QQHTTGK
GeneTree:ENSGT00690000102169 UniGene:Dm.234 EMBL:AY060903
RefSeq:NP_001027085.1 RefSeq:NP_001027086.1 SMR:Q9VRG6
IntAct:Q9VRG6 MINT:MINT-892686 STRING:Q9VRG6
EnsemblMetazoa:FBtr0077227 EnsemblMetazoa:FBtr0091702
GeneID:3771728 KEGG:dme:Dmel_CG33713 UCSC:CG33713-RA
FlyBase:FBgn0064116 eggNOG:NOG314885 InParanoid:Q9VRG6
OrthoDB:EOG466T35 GenomeRNAi:3771728 NextBio:851045 Uniprot:Q9VRG6
Length = 243
Score = 164 (62.8 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 92 ENMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAW 151
+ +++ F+ A +++ + S+ LL FY YKQAT G C P ++AKSK+ AW
Sbjct: 7 DTVDELFHLATEHVAKQSNSIGSADLLIFYGYYKQATNGPCKEQSPGLLQLQAKSKWQAW 66
Query: 152 NSLGQMAKSEAMSKYIALLKEVDAGWEDK 180
+LG M++S A Y+ L+E+ W +
Sbjct: 67 RNLGTMSQSAARQAYVQKLQELQPNWRSR 95
Score = 162 (62.1 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 45/152 (29%), Positives = 81/152 (53%)
Query: 194 KAMSKYIALLNEVDASWEDKEQEEINWDESQESGSKENEGQTKGWV--NVSSMINDESQL 251
+A SK+ A N S Q + + QE + GWV ++ S+ ++ +L
Sbjct: 58 QAKSKWQAWRNLGTMSQSAARQAYVQ--KLQELQPNWRSRRNPGWVVHSIESVPLEDQRL 115
Query: 252 DDNEKNIYEWAKEGKLDMLVKQLTKLKDFNINQLDENGLNCLHWACDRGHLKVVQHLIEK 311
D +EK +++ KE LD L ++L + D + +LDE+G+ +HWA DR ++++Q L+ +
Sbjct: 116 D-SEKTLFDHVKENNLDRL-RELLQPSD--LVKLDEHGMALIHWATDRNAVEIIQFLV-R 170
Query: 312 CGADVNVTDSDGDYGLDYAKAIEHTDLIEYLV 343
GA VN D++ L YA + H + ++ L+
Sbjct: 171 SGASVNQRDAEQQTPLHYAASCGHLEALQCLL 202
Score = 94 (38.1 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 246 NDESQLDDNEKNIYEWAKEGKLDMLVKQLTKLKDFNINQLDENGLNCLHWACDRGHLKVV 305
+D +LD++ + WA + +++ L + ++NQ D LH+A GHL+ +
Sbjct: 140 SDLVKLDEHGMALIHWATDRNAVEIIQFLVR-SGASVNQRDAEQQTPLHYAASCGHLEAL 198
Query: 306 QHLIEKCGADVNVTDSDGDYGLDYA 330
Q L+E A + + DSDG D A
Sbjct: 199 QCLLE-LHASLELRDSDGQTCYDVA 222
>FB|FBgn0037602 [details] [associations]
symbol:CG8021 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0046331 "lateral inhibition" evidence=IMP]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:AE014297 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0046331 HSSP:Q14103
GeneTree:ENSGT00390000008624 EMBL:BT031072 EMBL:BT032713
RefSeq:NP_649808.1 UniGene:Dm.36782 SMR:Q9VHP3
EnsemblMetazoa:FBtr0081878 GeneID:41021 KEGG:dme:Dmel_CG8021
UCSC:CG8021-RA FlyBase:FBgn0037602 InParanoid:Q9VHP3 OMA:HVANAEV
OrthoDB:EOG4M0CJB GenomeRNAi:41021 NextBio:821758 Uniprot:Q9VHP3
Length = 91
Score = 209 (78.6 bits), Expect = 9.9e-17, P = 9.9e-17
Identities = 36/81 (44%), Positives = 55/81 (67%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE 61
S +R K+FVGNLPWT+ EL+ +FS+YG + NA V+FD+ GLSK +GFV F ++
Sbjct: 3 SGFVRSSYKLFVGNLPWTIGSKELRTYFSKYGHVANAEVVFDRQLGLSKHYGFVVFSQRD 62
Query: 62 AVDKVFSTDSHVLEGSRLSIQ 82
A + + ++H L+G L++Q
Sbjct: 63 AFNSASNQNTHFLDGRVLTVQ 83
>GENEDB_PFALCIPARUM|PF10_0016 [details] [associations]
symbol:PF10_0016 "acyl CoA binding protein,
putative" species:5833 "Plasmodium falciparum" [GO:0006631 "fatty
acid metabolic process" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000582 Pfam:PF00887
PRINTS:PR00689 PROSITE:PS51228 Gene3D:1.20.80.10 InterPro:IPR014352
GO:GO:0006631 GO:GO:0000062 SUPFAM:SSF47027 HOGENOM:HOG000261845
EMBL:AE014185 GenomeReviews:AE014185_GR RefSeq:XP_001347301.1
HSSP:Q8IK57 ProteinModelPortal:Q8IK24 SMR:Q8IK24
EnsemblProtists:PF10_0016:mRNA GeneID:810174 KEGG:pfa:PF10_0016
EuPathDB:PlasmoDB:PF3D7_1001200 OMA:ETSAMRE ProtClustDB:PTZ00458
Uniprot:Q8IK24
Length = 90
Score = 184 (69.8 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 37/90 (41%), Positives = 52/90 (57%)
Query: 94 MEDRFNQACDYLPSLV--KKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAW 151
MED F + +Y+ SL K L T L Y YKQ+TVG CNI +PS++ K KY AW
Sbjct: 1 MEDLFQASVNYVNSLPNNKPLSVETKLDLYKYYKQSTVGNCNIKEPSYFQYADKKKYEAW 60
Query: 152 NSLGQMAKSEAMSKYIALLKEVDAGWEDKE 181
S+ + K +A +YI ++ E W++KE
Sbjct: 61 KSIENLNKEDAKKRYIEIVTENFPNWQNKE 90
>UNIPROTKB|Q8IK24 [details] [associations]
symbol:ACBP "Acyl CoA binding protein, isoform 2, ACBP2"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0006631 "fatty acid metabolic
process" evidence=ISS] InterPro:IPR000582 Pfam:PF00887
PRINTS:PR00689 PROSITE:PS51228 Gene3D:1.20.80.10 InterPro:IPR014352
GO:GO:0006631 GO:GO:0000062 SUPFAM:SSF47027 HOGENOM:HOG000261845
EMBL:AE014185 GenomeReviews:AE014185_GR RefSeq:XP_001347301.1
HSSP:Q8IK57 ProteinModelPortal:Q8IK24 SMR:Q8IK24
EnsemblProtists:PF10_0016:mRNA GeneID:810174 KEGG:pfa:PF10_0016
EuPathDB:PlasmoDB:PF3D7_1001200 OMA:ETSAMRE ProtClustDB:PTZ00458
Uniprot:Q8IK24
Length = 90
Score = 184 (69.8 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 37/90 (41%), Positives = 52/90 (57%)
Query: 94 MEDRFNQACDYLPSLV--KKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAW 151
MED F + +Y+ SL K L T L Y YKQ+TVG CNI +PS++ K KY AW
Sbjct: 1 MEDLFQASVNYVNSLPNNKPLSVETKLDLYKYYKQSTVGNCNIKEPSYFQYADKKKYEAW 60
Query: 152 NSLGQMAKSEAMSKYIALLKEVDAGWEDKE 181
S+ + K +A +YI ++ E W++KE
Sbjct: 61 KSIENLNKEDAKKRYIEIVTENFPNWQNKE 90
>TAIR|locus:2137380 [details] [associations]
symbol:ACBP2 "AT4G27780" species:3702 "Arabidopsis
thaliana" [GO:0000062 "fatty-acyl-CoA binding" evidence=IEA;IDA]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006869 "lipid transport"
evidence=RCA;TAS] [GO:0009514 "glyoxysome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010288 "response
to lead ion" evidence=IEP] [GO:0032791 "lead ion binding"
evidence=IDA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=RCA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=RCA] [GO:0010260 "organ senescence" evidence=RCA]
[GO:0010351 "lithium ion transport" evidence=RCA] [GO:0016558
"protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR002110 InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS51228 SMART:SM00248
GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006869 GO:GO:0005789 GO:GO:0010288
Gene3D:1.20.80.10 InterPro:IPR014352 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0005778 GO:GO:0000062 GO:GO:0008289
SUPFAM:SSF47027 PROSITE:PS00880 HOGENOM:HOG000241133
ProtClustDB:CLSN2685520 GO:GO:0032791 EMBL:AF178947 EMBL:AF192307
EMBL:AF320561 EMBL:AL078579 EMBL:AL161571 EMBL:AY090256
EMBL:AY122892 EMBL:AY088510 IPI:IPI00530454 PIR:T09017
RefSeq:NP_194507.1 UniGene:At.25382 HSSP:P31787
ProteinModelPortal:Q9STP8 SMR:Q9STP8 IntAct:Q9STP8 STRING:Q9STP8
PRIDE:Q9STP8 EnsemblPlants:AT4G27780.1 GeneID:828891
KEGG:ath:AT4G27780 TAIR:At4g27780 InParanoid:Q9STP8
PhylomeDB:Q9STP8 Genevestigator:Q9STP8 GO:GO:0009514 Uniprot:Q9STP8
Length = 354
Score = 192 (72.6 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 47/157 (29%), Positives = 82/157 (52%)
Query: 191 PNQKAMSKYIALLNEVDASWEDKEQEEINWDESQESGSKENEGQTKGWVNVSSMINDESQ 250
P ++AM KYI ++ ++ +W D + + + + G T G V S + ++ES+
Sbjct: 173 PPEEAMEKYIEIVTQLYPTWLDGGVKA--GSRGGDDAASNSRG-TMGPVFSSLVYDEESE 229
Query: 251 LDDNEKNIYEWAKEGKLDMLVKQLTKLKDFNINQLDENGLNCLHWACDRGHLKVVQHLIE 310
+ I+ +A+EG+++ L+K + +N D G LHWA DRGHL + + L++
Sbjct: 230 NELKIDAIHGFAREGEVENLLKSIES--GIPVNARDSEGRTPLHWAIDRGHLNIAKVLVD 287
Query: 311 KCGADVNVTDSDGDYGLDYAKAIEHTDLIEYLVNSGS 347
K ADVN D++G L YA + + E+LV +
Sbjct: 288 K-NADVNAKDNEGQTPLHYAVVCDREAIAEFLVKQNA 323
Score = 190 (71.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 63/231 (27%), Positives = 106/231 (45%)
Query: 108 LVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQMAKSEAMSKYI 167
L +K+ S + Y LYK AT G C +PS M A++K+ AW LG M EAM KYI
Sbjct: 123 LSQKVPSDVQQQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYI 182
Query: 168 ALLKEVDAGWEDKEQEEINWDWKPNQKAMSKYIALLNEVDAS--WEDKEQEEINWDESQE 225
++ ++ W D + + A S + V +S ++++ + E+ D
Sbjct: 183 EIVTQLYPTWLDGG---VKAGSRGGDDAASNSRGTMGPVFSSLVYDEESENELKIDAIHG 239
Query: 226 SGSKENEGQTKGWV-NVSSMINDESQLDDNEKNIYEWAKE-GKLDMLVKQLTKLKDFNIN 283
EG+ + + ++ S I ++ D + WA + G L+ + K L K+ ++N
Sbjct: 240 FA---REGEVENLLKSIESGIPVNAR-DSEGRTPLHWAIDRGHLN-IAKVLVD-KNADVN 293
Query: 284 QLDENGLNCLHWA--CDRGHLKVVQHLIEKCGADVNVTDSDGDYGLDYAKA 332
D G LH+A CDR + + + K A+ D DG+ LD ++
Sbjct: 294 AKDNEGQTPLHYAVVCDR---EAIAEFLVKQNANTAAKDEDGNSPLDLCES 341
>TAIR|locus:2178426 [details] [associations]
symbol:ACBP1 "acyl-CoA binding protein 1" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0006869 "lipid transport" evidence=TAS]
[GO:0009505 "plant-type cell wall" evidence=IDA] [GO:0010288
"response to lead ion" evidence=IEP;IMP] [GO:0032791 "lead ion
binding" evidence=IDA] [GO:0006629 "lipid metabolic process"
evidence=IMP] [GO:0009409 "response to cold" evidence=IMP]
[GO:0070300 "phosphatidic acid binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0008289 "lipid binding"
evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0010029 "regulation of seed germination"
evidence=IMP] [GO:0010162 "seed dormancy process" evidence=IMP]
[GO:1900140 "regulation of seedling development" evidence=IMP]
[GO:0000062 "fatty-acyl-CoA binding" evidence=IDA]
InterPro:IPR002110 InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS50088 PROSITE:PS51228 SMART:SM00248 GO:GO:0016021
GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005576
GO:GO:0006869 GO:GO:0005789 GO:GO:0010288 Gene3D:1.20.80.10
InterPro:IPR014352 eggNOG:COG0666 GO:GO:0009409 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0006629 GO:GO:0000062 SUPFAM:SSF47027 PROSITE:PS00880
HOGENOM:HOG000241133 EMBL:U75273 EMBL:U75274 EMBL:AB020754
EMBL:AY059881 EMBL:AY093383 EMBL:AY087475 IPI:IPI00535196
RefSeq:NP_200159.1 UniGene:At.8952 HSSP:Q9BR61
ProteinModelPortal:Q9SM23 SMR:Q9SM23 IntAct:Q9SM23 PaxDb:Q9SM23
PRIDE:Q9SM23 EnsemblPlants:AT5G53470.1 GeneID:835428
KEGG:ath:AT5G53470 TAIR:At5g53470 InParanoid:Q9SM23 OMA:QLQLYGL
PhylomeDB:Q9SM23 ProtClustDB:CLSN2685520 Genevestigator:Q9SM23
GO:GO:0009505 GO:GO:0032791 GO:GO:0070300 Uniprot:Q9SM23
Length = 338
Score = 191 (72.3 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 56/156 (35%), Positives = 82/156 (52%)
Query: 191 PNQKAMSKYIALLNEVDASWEDKEQEEINWDESQESGSKENEGQTKGWVNVSSMINDESQ 250
P ++AM KYI L+ ++ +W + + N SG E G G V SS++ +E
Sbjct: 163 PPEEAMEKYIDLVTQLYPAWVEGGSKRRN-----RSG--EAAGPM-GPV-FSSLVYEEES 213
Query: 251 LDDNEKNI---YEWAKEGKLDMLVKQLTKLKDFNINQLDENGLNCLHWACDRGHLKVVQH 307
DNE I + +A+EG+++ L+K + +N D G LHWA DRGHL V +
Sbjct: 214 --DNELKIDAIHAFAREGEVENLLKCIEN--GIPVNARDSEGRTPLHWAIDRGHLNVAEA 269
Query: 308 LIEKCGADVNVTDSDGDYGLDYAKAIEHTDLIEYLV 343
L++K ADVN D++G L YA E L E+LV
Sbjct: 270 LVDK-NADVNAKDNEGQTSLHYAVVCEREALAEFLV 304
Score = 189 (71.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 76/309 (24%), Positives = 137/309 (44%)
Query: 43 DKNTGLSKGFGFVT-FQNKEAVDKVFS----TDSHVLEGSRLSIQPSDSHNRMAENME-- 95
D+N L++ + ++N V+ + TDS + E L +S + E +E
Sbjct: 33 DENLSLTRNHTTQSEYENLRKVETLTGISGETDSLIAEQGSLRGDEDESDDDDWEGVEST 92
Query: 96 ---DRFNQACDYLPS-----LVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSK 147
+ F+ A ++ + L +K+ + L+ Y LYK AT G C +PS M A++K
Sbjct: 93 ELDEAFSAATAFVAAAASDRLSQKVSNELQLQLYGLYKIATEGPCTAPQPSALKMTARAK 152
Query: 148 YNAWNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQEEINWDWKPNQKAMSKYIALLNEVD 207
+ AW LG M EAM KYI L+ ++ W + + N + + +L+
Sbjct: 153 WQAWQKLGAMPPEEAMEKYIDLVTQLYPAWVEGGSKRRNRSGEAAGPMGPVFSSLV---- 208
Query: 208 ASWEDKEQEEINWDESQESGSKENEGQTKGWVN-VSSMINDESQLDDNEKNIYEWAKE-G 265
+E++ E+ D EG+ + + + + I ++ D + WA + G
Sbjct: 209 --YEEESDNELKIDAIHAFA---REGEVENLLKCIENGIPVNAR-DSEGRTPLHWAIDRG 262
Query: 266 KLDMLVKQLTKLKDFNINQLDENGLNCLHWA--CDRGHLKVVQHLIEKCGADVNVTDSDG 323
L++ + K D +N D G LH+A C+R L + L+++ AD + D DG
Sbjct: 263 HLNVAEALVDKNAD--VNAKDNEGQTSLHYAVVCEREAL--AEFLVKQ-KADTTIKDEDG 317
Query: 324 DYGLDYAKA 332
+ LD ++
Sbjct: 318 NSPLDLCES 326
>DICTYBASE|DDB_G0270658 [details] [associations]
symbol:acbA "acyl-CoA binding protein" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0030435 "sporulation resulting in formation of a
cellular spore" evidence=IEA;IMP] [GO:0019901 "protein kinase
binding" evidence=IGI] [GO:0006469 "negative regulation of protein
kinase activity" evidence=IGI] [GO:0005576 "extracellular region"
evidence=IMP] [GO:0004860 "protein kinase inhibitor activity"
evidence=IGI] [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA;IDA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0009736 "cytokinin mediated signaling pathway" evidence=IEA]
[GO:0008289 "lipid binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS51228 dictyBase:DDB_G0270658 GO:GO:0007275 GO:GO:0005615
GO:GO:0019901 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0004860 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0006810
GO:GO:0006974 GO:GO:0030435 GO:GO:0000062 eggNOG:COG4281
GO:GO:0008289 InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880
HSSP:P31787 EMBL:AY878075 RefSeq:XP_646321.1
ProteinModelPortal:Q5FXM5 STRING:Q5FXM5 EnsemblProtists:DDB0231469
GeneID:8617276 KEGG:ddi:DDB_G0270658 OMA:PTNDEFL
ProtClustDB:CLSZ2729302 GO:GO:0009736 Uniprot:Q5FXM5
Length = 84
Score = 174 (66.3 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 98 FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQM 157
F +A + KK + LL Y LYKQ T G CNI +P +EAK+KYNAWN+L
Sbjct: 4 FEEAAQKVKEFTKKPSNDELLSLYGLYKQGTDGDCNISEPWAVQVEAKAKYNAWNALKGT 63
Query: 158 AKSEAMSKYIALLKEV 173
+K +A +KY+AL +++
Sbjct: 64 SKEDAKAKYVALYEQL 79
>UNIPROTKB|K7EQ02 [details] [associations]
symbol:DAZAP1 "DAZ-associated protein 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
Gene3D:3.30.70.330 HGNC:HGNC:2683 EMBL:AC005329 EMBL:AC027307
Ensembl:ENST00000592453 Uniprot:K7EQ02
Length = 225
Score = 170 (64.9 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 32/87 (36%), Positives = 53/87 (60%)
Query: 1 MSNS-IRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN 59
M+NS ++ K+FVG L W+ + L+ +FS+YG++++ +M DK T S+GFGFV F++
Sbjct: 1 MNNSGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD 60
Query: 60 KEAVDKVFSTDSHVLEGSRLSIQPSDS 86
V V ++ H L+G SD+
Sbjct: 61 PNCVGTVLASRPHTLDGRNQKGPRSDN 87
Score = 147 (56.8 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 25/84 (29%), Positives = 51/84 (60%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
NKIFVG +P EL+++F ++G + +++D +GFGF+TF+++++VD+ +
Sbjct: 91 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 150
Query: 69 TDSHVLEGSRLSI---QPSDSHNR 89
H + G ++ + +P DS ++
Sbjct: 151 MHFHDIMGKKVEVKRAEPRDSKSQ 174
>DICTYBASE|DDB_G0275027 [details] [associations]
symbol:DDB_G0275027 "SRA stem-loop-interacting
RNA-binding protein, mitochondrial" species:44689 "Dictyostelium
discoideum" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0275027 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AAFI02000013 eggNOG:COG0724
ProtClustDB:CLSZ2430003 RefSeq:XP_643856.1
ProteinModelPortal:Q86I71 PRIDE:Q86I71 EnsemblProtists:DDB0167377
GeneID:8619907 KEGG:ddi:DDB_G0275027 InParanoid:Q86I71 OMA:QFESKES
Uniprot:Q86I71
Length = 91
Score = 168 (64.2 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
LNKIFV LPW+V LK FS++G I + V+ D+ T SKGFGFV F++KE+V
Sbjct: 3 LNKIFVTRLPWSVCKEALKNHFSQFGNIKDCYVVLDRVTKRSKGFGFVQFESKESVQNAI 62
Query: 68 STDSHVLEGSRLSI 81
++D+ + G +L +
Sbjct: 63 NSDNEI-NGRKLVV 75
>UNIPROTKB|Q32P59 [details] [associations]
symbol:SLIRP "SRA stem-loop-interacting RNA-binding
protein, mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005739 GO:GO:0005634 GO:GO:0006355 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 HOGENOM:HOG000276232
EMBL:BC108247 IPI:IPI00713880 RefSeq:NP_001032562.1
UniGene:Bt.56679 ProteinModelPortal:Q32P59 STRING:Q32P59
Ensembl:ENSBTAT00000043035 GeneID:613614 KEGG:bta:613614 CTD:81892
eggNOG:NOG291073 GeneTree:ENSGT00390000008624 HOVERGEN:HBG079935
InParanoid:Q32P59 OMA:SNELREH OrthoDB:EOG4Z62Q4 NextBio:20898668
Uniprot:Q32P59
Length = 111
Score = 168 (64.2 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 26/72 (36%), Positives = 47/72 (65%)
Query: 12 FVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFSTDS 71
FV +PWT + +EL++ F+++G + +V FDK TG KG G++ F ++E + ++
Sbjct: 22 FVRKIPWTAASSELREHFAQFGHVRKCTVPFDKETGFHKGMGWIHFSSEEELHNALQQEN 81
Query: 72 HVLEGSRLSIQP 83
HV++G +L +QP
Sbjct: 82 HVIDGVKLHVQP 93
>UNIPROTKB|C9JB63 [details] [associations]
symbol:ECI2 "Enoyl-CoA delta isomerase 2, mitochondrial"
species:9606 "Homo sapiens" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS51228 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880 EMBL:AL033383
HGNC:HGNC:14601 IPI:IPI00946181 ProteinModelPortal:C9JB63
SMR:C9JB63 STRING:C9JB63 Ensembl:ENST00000495548
ArrayExpress:C9JB63 Bgee:C9JB63 Uniprot:C9JB63
Length = 220
Score = 168 (64.2 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 37/104 (35%), Positives = 54/104 (51%)
Query: 88 NRMAENMEDR-FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKS 146
NR A + F + + + L K + LK YALYKQAT G CN+ KP +++ K+
Sbjct: 79 NRTAMRASQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKA 138
Query: 147 KYNAWNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQEEINWDWK 190
K++AWN+LG + K A Y+ L+ + E Q E D K
Sbjct: 139 KWDAWNALGSLPKEAARQNYVDLVSSLSPSLESSSQVEPGTDRK 182
>UNIPROTKB|F1LLU7 [details] [associations]
symbol:ECI2 "Enoyl-CoA delta isomerase 2, mitochondrial"
species:9606 "Homo sapiens" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR000582 InterPro:IPR001753 Pfam:PF00378
Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228 GO:GO:0043231
GO:GO:0003824 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880 EMBL:AL033383
HGNC:HGNC:14601 IPI:IPI00974369 ProteinModelPortal:F1LLU7
SMR:F1LLU7 Ensembl:ENST00000478266 ArrayExpress:F1LLU7 Bgee:F1LLU7
Uniprot:F1LLU7
Length = 197
Score = 168 (64.2 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 37/104 (35%), Positives = 54/104 (51%)
Query: 88 NRMAENMEDR-FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKS 146
NR A + F + + + L K + LK YALYKQAT G CN+ KP +++ K+
Sbjct: 32 NRTAMRASQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKA 91
Query: 147 KYNAWNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQEEINWDWK 190
K++AWN+LG + K A Y+ L+ + E Q E D K
Sbjct: 92 KWDAWNALGSLPKEAARQNYVDLVSSLSPSLESSSQVEPGTDRK 135
>UNIPROTKB|F8WAW4 [details] [associations]
symbol:ECI2 "Enoyl-CoA delta isomerase 2, mitochondrial"
species:9606 "Homo sapiens" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS51228 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880 EMBL:AL033383
HGNC:HGNC:14601 IPI:IPI01014923 ProteinModelPortal:F8WAW4
SMR:F8WAW4 Ensembl:ENST00000496241 ArrayExpress:F8WAW4 Bgee:F8WAW4
Uniprot:F8WAW4
Length = 140
Score = 168 (64.2 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 37/104 (35%), Positives = 54/104 (51%)
Query: 88 NRMAENMEDR-FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKS 146
NR A + F + + + L K + LK YALYKQAT G CN+ KP +++ K+
Sbjct: 2 NRTAMRASQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKA 61
Query: 147 KYNAWNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQEEINWDWK 190
K++AWN+LG + K A Y+ L+ + E Q E D K
Sbjct: 62 KWDAWNALGSLPKEAARQNYVDLVSSLSPSLESSSQVEPGTDRK 105
>FB|FBgn0031992 [details] [associations]
symbol:CG8498 species:7227 "Drosophila melanogaster"
[GO:0000062 "fatty-acyl-CoA binding" evidence=ISS] [GO:0042049
"cellular acyl-CoA homeostasis" evidence=ISS] InterPro:IPR000582
Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228 EMBL:AE014134
Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062 eggNOG:COG4281
GeneTree:ENSGT00680000099745 InterPro:IPR022408 SUPFAM:SSF47027
PROSITE:PS00880 HSSP:P07107 OMA:CNTDKPG OrthoDB:EOG42549C
EMBL:BT023703 RefSeq:NP_609187.1 UniGene:Dm.30815 SMR:Q9VLS4
IntAct:Q9VLS4 MINT:MINT-877756 STRING:Q9VLS4
EnsemblMetazoa:FBtr0079640 GeneID:34111 KEGG:dme:Dmel_CG8498
UCSC:CG8498-RA FlyBase:FBgn0031992 InParanoid:Q9VLS4
GenomeRNAi:34111 NextBio:786898 Uniprot:Q9VLS4
Length = 90
Score = 167 (63.8 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 35/86 (40%), Positives = 54/86 (62%)
Query: 90 MAENMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYN 149
M+E E FNQA + + +L + LL+ Y+LYKQATVG CN DKP + + + K+K+
Sbjct: 1 MSELQE--FNQAAEDVKNLNTTPGDNDLLELYSLYKQATVGDCNTDKPGFLDFKGKAKWE 58
Query: 150 AWNSLGQMAKSEAMSKYIALLKEVDA 175
AWN+ M+ ++A + YI +K + A
Sbjct: 59 AWNNRKGMSNTDAQAAYITKVKALIA 84
>GENEDB_PFALCIPARUM|PF11_0197 [details] [associations]
symbol:PF11_0197 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR002110 InterPro:IPR000582 Pfam:PF00887
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS51228 SMART:SM00248
Gene3D:1.20.80.10 InterPro:IPR014352 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0000062 SUPFAM:SSF47027 HSSP:Q60778 EMBL:AE014186
RefSeq:XP_001347868.1 ProteinModelPortal:Q8IIH7 PRIDE:Q8IIH7
EnsemblProtists:PF11_0197:mRNA GeneID:810744 KEGG:pfa:PF11_0197
EuPathDB:PlasmoDB:PF3D7_1119000 HOGENOM:HOG000282310
ProtClustDB:CLSZ2500891 Uniprot:Q8IIH7
Length = 371
Score = 144 (55.7 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 216 EEINWDESQESGSKENEGQTKGWVNVSSMINDESQLDDNEKNIY-EWAKEGKLDMLVKQL 274
E++N D++ + ++ + N + ND + D+N +I + G L + K L
Sbjct: 223 EKLNNDDNMKFSKTVSKMKPFKEQNKKHLENDNND-DNNICDILCQHVVMGDLASIKKNL 281
Query: 275 TKLKDFNINQLDENGLNCLHWACDRGHLKVVQHLIEKCGADVNVTDSDGDYGLDYAKAIE 334
K IN+ + +GL LH+ACDRG++ +V++L+ + GA++NV DS GD L A E
Sbjct: 282 -KHNPSLINKKNSSGLTPLHYACDRGYIDIVKYLVNQ-GANINVEDSYGDTPLHMAAYSE 339
Query: 335 HTDLIEYLVNSGS 347
+++++L + G+
Sbjct: 340 KLNVVDFLKSVGA 352
Score = 85 (35.0 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 92 ENMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNI--DKPSWYNMEAKSKYN 149
E +E++F Q C+ + KL + L Y L+KQAT+G + ++ S N E S N
Sbjct: 75 EELEEKFVQTCNAVKMYRNKLKTEEWLHLYGLFKQATIGNMILSNEEDSTKNTETSSNNN 134
Score = 75 (31.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 265 GKLDMLVKQLTKLKDFNINQLDENGLNCLHWACDRGHLKVVQHLIEKCGADVNVTDSDG 323
G +D +VK L + NIN D G LH A L VV L + GAD+N T+S+G
Sbjct: 306 GYID-IVKYLVN-QGANINVEDSYGDTPLHMAAYSEKLNVVDFL-KSVGADINKTNSEG 361
>UNIPROTKB|Q8IIH7 [details] [associations]
symbol:PF11_0197 "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR002110 InterPro:IPR000582 Pfam:PF00887
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS51228 SMART:SM00248
Gene3D:1.20.80.10 InterPro:IPR014352 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0000062 SUPFAM:SSF47027 HSSP:Q60778 EMBL:AE014186
RefSeq:XP_001347868.1 ProteinModelPortal:Q8IIH7 PRIDE:Q8IIH7
EnsemblProtists:PF11_0197:mRNA GeneID:810744 KEGG:pfa:PF11_0197
EuPathDB:PlasmoDB:PF3D7_1119000 HOGENOM:HOG000282310
ProtClustDB:CLSZ2500891 Uniprot:Q8IIH7
Length = 371
Score = 144 (55.7 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 216 EEINWDESQESGSKENEGQTKGWVNVSSMINDESQLDDNEKNIY-EWAKEGKLDMLVKQL 274
E++N D++ + ++ + N + ND + D+N +I + G L + K L
Sbjct: 223 EKLNNDDNMKFSKTVSKMKPFKEQNKKHLENDNND-DNNICDILCQHVVMGDLASIKKNL 281
Query: 275 TKLKDFNINQLDENGLNCLHWACDRGHLKVVQHLIEKCGADVNVTDSDGDYGLDYAKAIE 334
K IN+ + +GL LH+ACDRG++ +V++L+ + GA++NV DS GD L A E
Sbjct: 282 -KHNPSLINKKNSSGLTPLHYACDRGYIDIVKYLVNQ-GANINVEDSYGDTPLHMAAYSE 339
Query: 335 HTDLIEYLVNSGS 347
+++++L + G+
Sbjct: 340 KLNVVDFLKSVGA 352
Score = 85 (35.0 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 92 ENMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNI--DKPSWYNMEAKSKYN 149
E +E++F Q C+ + KL + L Y L+KQAT+G + ++ S N E S N
Sbjct: 75 EELEEKFVQTCNAVKMYRNKLKTEEWLHLYGLFKQATIGNMILSNEEDSTKNTETSSNNN 134
Score = 75 (31.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 265 GKLDMLVKQLTKLKDFNINQLDENGLNCLHWACDRGHLKVVQHLIEKCGADVNVTDSDG 323
G +D +VK L + NIN D G LH A L VV L + GAD+N T+S+G
Sbjct: 306 GYID-IVKYLVN-QGANINVEDSYGDTPLHMAAYSEKLNVVDFL-KSVGADINKTNSEG 361
>UNIPROTKB|F6QBK4 [details] [associations]
symbol:ECI2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0000062
"fatty-acyl-CoA binding" evidence=IEA] InterPro:IPR000582
InterPro:IPR001753 Pfam:PF00378 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS51228 GO:GO:0003824 Gene3D:1.20.80.10 InterPro:IPR014352
GO:GO:0000062 InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880
GeneTree:ENSGT00670000097595 EMBL:DAAA02055879 IPI:IPI00710375
Ensembl:ENSBTAT00000039110 Uniprot:F6QBK4
Length = 198
Score = 166 (63.5 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 35/94 (37%), Positives = 51/94 (54%)
Query: 90 MAENMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYN 149
M + +D FN A + L + + LK YALYKQAT G CN+ KP + K+K++
Sbjct: 16 MLASQKD-FNNAVSQVKLLKEDPGNEVKLKLYALYKQATEGPCNVPKPGMLDFINKTKWD 74
Query: 150 AWNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQE 183
AWN+LG ++K A Y+ L+ + A E E
Sbjct: 75 AWNALGSLSKEAARQNYVDLVSRLSASSESPSPE 108
>UNIPROTKB|I3LKV0 [details] [associations]
symbol:SLIRP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00390000008624 OMA:SNELREH Ensembl:ENSSSCT00000031620
Uniprot:I3LKV0
Length = 102
Score = 166 (63.5 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 27/71 (38%), Positives = 46/71 (64%)
Query: 12 FVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFSTDS 71
FV +PWT + NEL++ F+++G I V FDK TG +G G++ F ++E + V ++
Sbjct: 13 FVRKIPWTAASNELREHFAQFGHIRKCIVPFDKETGFHRGMGWIQFSSEEELHNVLQQEN 72
Query: 72 HVLEGSRLSIQ 82
HV++G +L +Q
Sbjct: 73 HVIDGVKLHVQ 83
>UNIPROTKB|F1NIB4 [details] [associations]
symbol:HNRNPAB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104347 EMBL:AADN02028501 EMBL:AADN02028502
EMBL:AADN02028503 IPI:IPI00603451 ProteinModelPortal:F1NIB4
Ensembl:ENSGALT00000023233 ArrayExpress:F1NIB4 Uniprot:F1NIB4
Length = 212
Score = 165 (63.1 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L W S +LK +F+++G++ + ++ D NTG S+GFGF+ F+ +V+KV
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60
Query: 70 DSHVLEGSRLSIQP 83
H L+G RL I P
Sbjct: 61 KEHRLDG-RL-IDP 72
Score = 125 (49.1 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 26/85 (30%), Positives = 46/85 (54%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L + +++++F E+G+I + D T +GF F+TF+ ++ V KV
Sbjct: 83 VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVL 142
Query: 68 STDSHVLEGSRLSI---QPSDSHNR 89
H + GS+ I QP + + +
Sbjct: 143 EKKFHNVSGSKCEIKVAQPKEVYQQ 167
>UNIPROTKB|H0YA96 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC124016 HGNC:HGNC:5036
ChiTaRS:HNRNPD Ensembl:ENST00000514671 Uniprot:H0YA96
Length = 210
Score = 165 (63.1 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + +LK +FS++G++++ ++ D TG S+GFGFV F+ E+VDKV
Sbjct: 2 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 61
Query: 70 DSHVLEG 76
H L G
Sbjct: 62 KEHKLNG 68
Score = 111 (44.1 bits), Expect = 0.00044, P = 0.00044
Identities = 22/88 (25%), Positives = 45/88 (51%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L +++++F +G++ + + D T +GF F+TF+ +E V K+
Sbjct: 85 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 144
Query: 68 STDSHVLEGSRLSIQPSDSHNRMAENME 95
H + S+ I+ + S + + +
Sbjct: 145 EKKYHNVGLSKCEIKVAMSKEQYQQQQQ 172
>UNIPROTKB|D6RAF8 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043488 "regulation of mRNA stability" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005829 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0048255 HOGENOM:HOG000234441 EMBL:AC124016
HGNC:HGNC:5036 ChiTaRS:HNRNPD InterPro:IPR012956 Pfam:PF08143
IPI:IPI00965952 ProteinModelPortal:D6RAF8 SMR:D6RAF8
Ensembl:ENST00000507010 ArrayExpress:D6RAF8 Bgee:D6RAF8
Uniprot:D6RAF8
Length = 221
Score = 165 (63.1 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + +LK +FS++G++++ ++ D TG S+GFGFV F+ E+VDKV
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 70 DSHVLEG 76
H L G
Sbjct: 158 KEHKLNG 164
>UNIPROTKB|D6RBQ9 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HOGENOM:HOG000234441 EMBL:AC124016 HGNC:HGNC:5036 ChiTaRS:HNRNPD
InterPro:IPR012956 Pfam:PF08143 IPI:IPI00963980
ProteinModelPortal:D6RBQ9 SMR:D6RBQ9 Ensembl:ENST00000503822
ArrayExpress:D6RBQ9 Bgee:D6RBQ9 Uniprot:D6RBQ9
Length = 155
Score = 165 (63.1 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + +LK +FS++G++++ ++ D TG S+GFGFV F+ E+VDKV
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 70 DSHVLEG 76
H L G
Sbjct: 139 KEHKLNG 145
>ZFIN|ZDB-GENE-040426-2516 [details] [associations]
symbol:zgc:77052 "zgc:77052" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040426-2516 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 InterPro:IPR012956
Pfam:PF08143 OrthoDB:EOG42BX9K EMBL:FP085391 EMBL:BC066681
IPI:IPI00497482 RefSeq:NP_998467.1 UniGene:Dr.75633 SMR:Q6NYA1
STRING:Q6NYA1 Ensembl:ENSDART00000098408 GeneID:406594
KEGG:dre:406594 OMA:EIKTYFS NextBio:20818146 Uniprot:Q6NYA1
Length = 309
Score = 181 (68.8 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 29/70 (41%), Positives = 48/70 (68%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L W S +LK +FS++G++M+ ++ D NTG S+GFGF+ F+ ++VD+V
Sbjct: 46 KMFVGGLSWDTSKKDLKDYFSKFGEVMDCTIKMDSNTGRSRGFGFILFKESDSVDRVLQQ 105
Query: 70 DSHVLEGSRL 79
H L+G ++
Sbjct: 106 KEHRLDGRQI 115
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 25/85 (29%), Positives = 45/85 (52%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L + +++++F +G+I + D T +GF F+TF+ + AV K+
Sbjct: 128 VKKIFVGGLNPETTEEKIREYFGSFGEIETIELPTDPKTSKRRGFVFITFKEEFAVKKIL 187
Query: 68 STDSHVLEGSRLSI---QPSDSHNR 89
H + GS+ I QP + + +
Sbjct: 188 EKKYHNVCGSKCEIKIAQPKEIYQQ 212
>TAIR|locus:2007903 [details] [associations]
symbol:AT1G17640 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K12741 OMA:GHQTGYK IPI:IPI00519530 RefSeq:NP_173208.1
UniGene:At.51654 ProteinModelPortal:F4I906 SMR:F4I906 PRIDE:F4I906
EnsemblPlants:AT1G17640.1 GeneID:838341 KEGG:ath:AT1G17640
Uniprot:F4I906
Length = 369
Score = 180 (68.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 35/91 (38%), Positives = 57/91 (62%)
Query: 4 SIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAV 63
++ + KIFVG LP + +ELK +F YG I+ +M+D +TG S+GFGFVTFQ +++V
Sbjct: 152 AVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSV 211
Query: 64 DKVFSTDS-HVLEGSRLSIQPSDSHNRMAEN 93
D++FS H L ++ I+ ++ +N
Sbjct: 212 DRLFSDGKVHELGDKQVEIKRAEPKRTGRDN 242
Score = 146 (56.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE 61
S+S+ K+FVG + W + +F ++G+++++ +M D+ TG +GFGFVTF +
Sbjct: 59 SSSMSSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSA 118
Query: 62 AVDKVFSTDSHVLEGSRLSIQ 82
+KV D HV++ ++ ++
Sbjct: 119 VAEKVLEED-HVIDDRKVDLK 138
>DICTYBASE|DDB_G0287335 [details] [associations]
symbol:DDB_G0287335 "RNA-binding region RNP-1
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0287335 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AAFI02000100 RefSeq:XP_637244.1
ProteinModelPortal:Q54KH9 PRIDE:Q54KH9 EnsemblProtists:DDB0233757
GeneID:8626075 KEGG:ddi:DDB_G0287335 eggNOG:NOG271892
InParanoid:Q54KH9 OMA:MEAENEM ProtClustDB:CLSZ2430003
Uniprot:Q54KH9
Length = 91
Score = 161 (61.7 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
NKIFV LPW+V LK+ FS+YG I ++ V+ DK T S+GFGFVTF ++V K
Sbjct: 3 NKIFVSQLPWSVCREALKQHFSKYGSINHSYVVVDKVTKRSRGFGFVTFDQSDSVQKAME 62
Query: 69 TDSHVLEGSRLSI 81
++ + G +L +
Sbjct: 63 AENE-MGGRKLVV 74
>UNIPROTKB|D6RF44 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043488 "regulation of mRNA stability" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005829 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0048255 HOGENOM:HOG000234441 EMBL:AC124016
HGNC:HGNC:5036 ChiTaRS:HNRNPD IPI:IPI00967562
ProteinModelPortal:D6RF44 SMR:D6RF44 Ensembl:ENST00000515432
ArrayExpress:D6RF44 Bgee:D6RF44 Uniprot:D6RF44
Length = 112
Score = 160 (61.4 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 11 IFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFSTD 70
+F+G L W + +LK +FS++G++++ ++ D TG S+GFGFV F+ E+VDKV
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 71 SHVLEG 76
H L G
Sbjct: 61 EHKLNG 66
>UNIPROTKB|J3KTC1 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
EMBL:AC015883 EMBL:AC091181 Ensembl:ENST00000579590 Uniprot:J3KTC1
Length = 141
Score = 160 (61.4 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 33/84 (39%), Positives = 49/84 (58%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
+K+F+G L W S + L+ +FS++G+I VM D T S+GFGFVTF + +VDKV
Sbjct: 17 SKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLG 76
Query: 69 TDSHVLEGSRLSIQPSDSHNRMAE 92
H L+ +I P + R A+
Sbjct: 77 QPHHELDSK--TIDPKVAFPRRAQ 98
>RGD|1585290 [details] [associations]
symbol:Slirp "SRA stem-loop interacting RNA binding protein"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000961 "negative regulation of mitochondrial RNA
catabolic process" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1585290 GO:GO:0005739 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CH473982 CTD:81892
GeneTree:ENSGT00390000008624 OrthoDB:EOG4Z62Q4 IPI:IPI00365864
RefSeq:NP_001102977.1 UniGene:Rn.65910 Ensembl:ENSRNOT00000016479
GeneID:688717 KEGG:rno:688717 UCSC:RGD:1585290 NextBio:737107
Uniprot:D4A4W6
Length = 111
Score = 160 (61.4 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 23/72 (31%), Positives = 45/72 (62%)
Query: 12 FVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFSTDS 71
F+ +PWT + +EL++ F+++G + +V FDK TG +G G+V F ++E + +
Sbjct: 22 FIRKIPWTAASSELREHFAQFGHVRRCTVPFDKETGFHRGMGWVQFSSQEELQNALQEEH 81
Query: 72 HVLEGSRLSIQP 83
H+++G + +QP
Sbjct: 82 HIIDGVEIHVQP 93
>WB|WBGene00018949 [details] [associations]
symbol:acbp-4 species:6239 "Caenorhabditis elegans"
[GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
GeneTree:ENSGT00680000099745 SUPFAM:SSF47027 HSSP:P07107
HOGENOM:HOG000261845 EMBL:FO080186 PIR:T16468 RefSeq:NP_498609.1
UniGene:Cel.32884 ProteinModelPortal:Q20862 SMR:Q20862
EnsemblMetazoa:F56C9.5 GeneID:186372 KEGG:cel:CELE_F56C9.5
UCSC:F56C9.5 CTD:186372 WormBase:F56C9.5 eggNOG:NOG261959
InParanoid:Q20862 OMA:WIIQALP NextBio:931604 Uniprot:Q20862
Length = 146
Score = 160 (61.4 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 43/140 (30%), Positives = 75/140 (53%)
Query: 90 MAENMEDRFNQACDYLPSLVK----KLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAK 145
M ++++++F A + +L K K + L+ Y+LYKQAT G+C+ +P ++ +E +
Sbjct: 1 MGKSLDEQFEAAVWIINALPKNGPIKTSINDQLQMYSLYKQATSGKCDTIQPYFFQIEQR 60
Query: 146 SKYNAWNSLGQMAKSEAMSKYIA-LLKEVD-AGWEDKEQEEIN----WDWKPNQKAMSKY 199
K+NAWN LG M ++EA ++Y+ +LK + A E E ++ D P Q + ++
Sbjct: 61 MKWNAWNQLGNMDEAEAKAQYVEKMLKLCNQAEAEHNLMEFLSDPTIADLLPKQNQLREH 120
Query: 200 IALLNEVDASWEDKEQEEIN 219
A L + E EIN
Sbjct: 121 FATLGRTTVKGFEGETVEIN 140
>UNIPROTKB|Q7ZYE9 [details] [associations]
symbol:hnrnpab "Hnrpab-prov protein" species:8355 "Xenopus
laevis" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HOVERGEN:HBG002295 HSSP:Q14103 KO:K13044 InterPro:IPR012956
Pfam:PF08143 CTD:3182 EMBL:BC043814 RefSeq:NP_001080489.1
UniGene:Xl.45404 ProteinModelPortal:Q7ZYE9 SMR:Q7ZYE9 IntAct:Q7ZYE9
GeneID:380181 KEGG:xla:380181 Xenbase:XB-GENE-6043063
Uniprot:Q7ZYE9
Length = 324
Score = 177 (67.4 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 34/83 (40%), Positives = 55/83 (66%)
Query: 1 MSNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNK 60
+S+ + + K+FVG L W S +LK +F+++G++ + ++ D NTG S+GFGF+ F++
Sbjct: 56 ISSPLTEGVKMFVGGLSWDTSKKDLKDYFAKFGEVSDCTIKMDPNTGRSRGFGFILFKDA 115
Query: 61 EAVDKVFSTDSHVLEGSRLSIQP 83
E+VDKV H L+G RL I P
Sbjct: 116 ESVDKVLEHKEHRLDG-RL-IDP 136
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 24/85 (28%), Positives = 45/85 (52%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L ++++++F +G+I + D T +GF F+TF+ ++ V K+
Sbjct: 147 IKKIFVGGLNPEAGEDQIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKIL 206
Query: 68 STDSHVLEGSRLSI---QPSDSHNR 89
H + GS+ I QP + + +
Sbjct: 207 EKKFHNVSGSKCEIKIAQPKEVYQQ 231
>UNIPROTKB|E2RSQ3 [details] [associations]
symbol:SLIRP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005739 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
CTD:81892 GeneTree:ENSGT00390000008624 OMA:SNELREH
EMBL:AAEX03005881 RefSeq:XP_547932.2 ProteinModelPortal:E2RSQ3
Ensembl:ENSCAFT00000027289 GeneID:490810 KEGG:cfa:490810
NextBio:20863760 Uniprot:E2RSQ3
Length = 111
Score = 158 (60.7 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 25/71 (35%), Positives = 45/71 (63%)
Query: 12 FVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFSTDS 71
FV +PWT + +EL++ F+++G + +V FDK TG +G G+V F ++E + +
Sbjct: 22 FVRKIPWTAASSELREHFAQFGHVRKCTVPFDKETGFHRGMGWVHFSSEEDLQNALQQEK 81
Query: 72 HVLEGSRLSIQ 82
H+++G +L IQ
Sbjct: 82 HIIDGVKLHIQ 92
>POMBASE|SPBC1539.06 [details] [associations]
symbol:SPBC1539.06 "acyl-coenzyme A binding protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000062
"fatty-acyl-CoA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006631 "fatty acid metabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] InterPro:IPR000582 Pfam:PF00887
PRINTS:PR00689 PROSITE:PS51228 PomBase:SPBC1539.06 GO:GO:0005829
GO:GO:0005634 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0006810
EMBL:CU329671 GO:GO:0006631 GO:GO:0000062 eggNOG:COG4281
GO:GO:0008289 SUPFAM:SSF47027 PROSITE:PS00880 HOGENOM:HOG000261845
HSSP:P31787 PIR:T39465 RefSeq:NP_596820.1 ProteinModelPortal:Q9Y7Z3
SMR:Q9Y7Z3 STRING:Q9Y7Z3 PRIDE:Q9Y7Z3 EnsemblFungi:SPBC1539.06.1
GeneID:2539982 KEGG:spo:SPBC1539.06 OMA:GNINIEW OrthoDB:EOG454D8D
NextBio:20801125 Uniprot:Q9Y7Z3
Length = 87
Score = 158 (60.7 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 94 MEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNS 153
M F QA + L + +S LLK YAL+KQATVG N +KP +++ K K+NAW
Sbjct: 1 MSSTFEQAAADVKELKETPNSDELLKLYALFKQATVGDNNTEKPGLLDLKGKFKWNAWEE 60
Query: 154 LGQMAKSEAMSKYIALLKEV 173
L +K +A S+YI+ + E+
Sbjct: 61 LKGKSKEDAASEYISFVDEL 80
>WB|WBGene00007680 [details] [associations]
symbol:maa-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA;IDA] [GO:0000062
"fatty-acyl-CoA binding" evidence=IEA;IDA] [GO:0016049 "cell
growth" evidence=IGI] [GO:0032504 "multicellular organism
reproduction" evidence=IMP] [GO:0032456 "endocytic recycling"
evidence=IGI;IMP] [GO:0007032 "endosome organization"
evidence=IGI;IMP] [GO:0030173 "integral to Golgi membrane"
evidence=IDA] [GO:0031303 "integral to endosome membrane"
evidence=IDA] [GO:0045177 "apical part of cell" evidence=IDA]
[GO:0045178 "basal part of cell" evidence=IDA] [GO:0055038
"recycling endosome membrane" evidence=IDA] InterPro:IPR000582
Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228 Gene3D:1.20.80.10
InterPro:IPR014352 GO:GO:0016049 GO:GO:0030173 GO:GO:0045177
GO:GO:0032504 GO:GO:0000062 eggNOG:COG4281
GeneTree:ENSGT00680000099745 InterPro:IPR022408 SUPFAM:SSF47027
PROSITE:PS00880 HSSP:P07107 GO:GO:0045178 GO:GO:0007032
GO:GO:0032456 GO:GO:0031303 GO:GO:0055038 EMBL:Z92826 PIR:T19386
RefSeq:NP_499531.1 ProteinModelPortal:Q9XTZ5 SMR:Q9XTZ5
STRING:Q9XTZ5 PaxDb:Q9XTZ5 EnsemblMetazoa:C18D11.2 GeneID:176612
KEGG:cel:CELE_C18D11.2 UCSC:C18D11.2 CTD:176612 WormBase:C18D11.2
HOGENOM:HOG000019957 InParanoid:Q9XTZ5 OMA:KTEEWMK NextBio:893296
Uniprot:Q9XTZ5
Length = 266
Score = 171 (65.3 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 60/210 (28%), Positives = 101/210 (48%)
Query: 111 KLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQMAKSEAMSKYI-AL 169
K + L FYAL+KQAT G+C++ KPS+Y+++ K+NAWN L M EA Y+ ++
Sbjct: 21 KTSTDEKLNFYALFKQATHGKCDLPKPSFYDIQGVYKWNAWNKLDNMTMDEAKQAYVDSI 80
Query: 170 LKEVDAGWEDKEQEEINWDWKPNQKAMSKYIALLNEVDASWEDKEQEEINWDESQESGSK 229
++++ ++ + EE W + +A EV E K+Q + +++ +K
Sbjct: 81 VQKIREVQKEYKTEE----WMKGDTY--ELLAPKFEVLGVLEGKDQAV---EHPKKTENK 131
Query: 230 ENEGQTKGWVNVSSMINDESQLDDNEKNIYEWAKEGKLDMLVKQLTKLKD-FNINQLDEN 288
E E +T NV + + L DNE Y A + ++ T+ + FN ++
Sbjct: 132 ETENETD---NVETPNSSACILSDNE---YADAIDDEIQSRSSSFTEPHNSFNRRISRQS 185
Query: 289 GLNCLHWACDR--GHLKVVQHLIEKCGADV 316
L +C R LKV+ I+K G V
Sbjct: 186 SLKS---SCHRLEKELKVITESIDKLGKAV 212
>MGI|MGI:1916394 [details] [associations]
symbol:Slirp "SRA stem-loop interacting RNA binding protein"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000961 "negative regulation of mitochondrial RNA
catabolic process" evidence=IGI] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
MGI:MGI:1916394 GO:GO:0005739 GO:GO:0005634 GO:GO:0006355
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
HOGENOM:HOG000276232 CTD:81892 eggNOG:NOG291073
GeneTree:ENSGT00390000008624 HOVERGEN:HBG079935 OMA:SNELREH
OrthoDB:EOG4Z62Q4 ChiTaRS:SLIRP EMBL:AJ293625 EMBL:AK007699
EMBL:BC100567 IPI:IPI00318935 IPI:IPI00462115 RefSeq:NP_081234.2
UniGene:Mm.355701 ProteinModelPortal:Q9D8T7 SMR:Q9D8T7
STRING:Q9D8T7 PhosphoSite:Q9D8T7 PaxDb:Q9D8T7 PRIDE:Q9D8T7
Ensembl:ENSMUST00000160488 Ensembl:ENSMUST00000161023 GeneID:380773
KEGG:mmu:380773 UCSC:uc007oje.2 InParanoid:Q9D8T7 NextBio:401221
Bgee:Q9D8T7 CleanEx:MM_1810035L17RIK Genevestigator:Q9D8T7
GermOnline:ENSMUSG00000021040 Uniprot:Q9D8T7
Length = 112
Score = 157 (60.3 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 27/90 (30%), Positives = 52/90 (57%)
Query: 12 FVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFSTDS 71
FV +PWT + +EL++ F+++G + +V FDK TG +G G+V F ++E + +
Sbjct: 22 FVRKIPWTAAASELREHFAQFGHVRRCTVPFDKETGFHRGMGWVQFSSQEELQNALQQEH 81
Query: 72 HVLEGSRLSIQPSDS---HNRMAENMEDRF 98
H+++G ++ +Q + H + E+RF
Sbjct: 82 HIIDGVKIHVQAQRAKALHGAQTSD-EERF 110
>UNIPROTKB|Q83CD7 [details] [associations]
symbol:CBU_1183 "Glycine-rich RNA-binding protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AE016828
GenomeReviews:AE016828_GR HOGENOM:HOG000276232 OMA:KRVHIPT
RefSeq:NP_820178.2 ProteinModelPortal:Q83CD7 PRIDE:Q83CD7
GeneID:1209086 KEGG:cbu:CBU_1183 PATRIC:17931107
ProtClustDB:CLSK914597 BioCyc:CBUR227377:GJ7S-1169-MONOMER
Uniprot:Q83CD7
Length = 117
Score = 156 (60.0 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 33/90 (36%), Positives = 55/90 (61%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
NKI+VG+L + V+ +EL+ FF +YG+I A ++ D+ TG SKGF F+T+ ++A + S
Sbjct: 18 NKIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAVS 77
Query: 69 TDSHV-LEGSRLSIQPSDSHNRMAENMEDR 97
+ + L+G ++ + N EN DR
Sbjct: 78 KANGIDLQGRKIRV------NIARENTGDR 101
>TIGR_CMR|CBU_1183 [details] [associations]
symbol:CBU_1183 "nucleic acid binding domain protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AE016828
GenomeReviews:AE016828_GR HOGENOM:HOG000276232 OMA:KRVHIPT
RefSeq:NP_820178.2 ProteinModelPortal:Q83CD7 PRIDE:Q83CD7
GeneID:1209086 KEGG:cbu:CBU_1183 PATRIC:17931107
ProtClustDB:CLSK914597 BioCyc:CBUR227377:GJ7S-1169-MONOMER
Uniprot:Q83CD7
Length = 117
Score = 156 (60.0 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 33/90 (36%), Positives = 55/90 (61%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
NKI+VG+L + V+ +EL+ FF +YG+I A ++ D+ TG SKGF F+T+ ++A + S
Sbjct: 18 NKIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAVS 77
Query: 69 TDSHV-LEGSRLSIQPSDSHNRMAENMEDR 97
+ + L+G ++ + N EN DR
Sbjct: 78 KANGIDLQGRKIRV------NIARENTGDR 101
>UNIPROTKB|Q98SJ2 [details] [associations]
symbol:dazap1 "DAZ-associated protein 1" species:8355
"Xenopus laevis" [GO:0003723 "RNA binding" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0007275 GO:GO:0005737 GO:GO:0030154
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048477 GO:GO:0003723
CTD:26528 HOVERGEN:HBG002295 KO:K14411 EMBL:AY028920
RefSeq:NP_001082088.1 UniGene:Xl.1666 ProteinModelPortal:Q98SJ2
SMR:Q98SJ2 GeneID:398218 KEGG:xla:398218 Xenbase:XB-GENE-864805
Uniprot:Q98SJ2
Length = 360
Score = 174 (66.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 30/91 (32%), Positives = 51/91 (56%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
++ K+FVG L W+ + L+ +FS+YG++++ +M DK T S+GFGFV F++ V V
Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67
Query: 67 FSTDSHVLEGSRLSIQPSDSHNRMAENMEDR 97
++ H L+G + +P E R
Sbjct: 68 LASRPHTLDGRNIDPKPCTPRGMQPERSRPR 98
Score = 150 (57.9 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 26/84 (30%), Positives = 51/84 (60%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
NKIFVG +P ELK++F+ +G + +++D +GFGF+TF+++++VD+ +
Sbjct: 114 NKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 173
Query: 69 TDSHVLEGSRLSI---QPSDSHNR 89
H + G ++ + +P DS ++
Sbjct: 174 MHFHDIMGKKVEVKRAEPRDSKSQ 197
>UNIPROTKB|I3LB68 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 CTD:26528 KO:K14411 OMA:HNLDGRN
GeneTree:ENSGT00700000104255 EMBL:FP325262 RefSeq:NP_001231435.1
UniGene:Ssc.1299 Ensembl:ENSSSCT00000023438 GeneID:100625005
KEGG:ssc:100625005 Uniprot:I3LB68
Length = 406
Score = 175 (66.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 31/84 (36%), Positives = 53/84 (63%)
Query: 1 MSNS-IRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN 59
M+NS ++ K+FVG L W+ + L+ +FS+YG++++ +M DK T S+GFGFV F++
Sbjct: 1 MNNSGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD 60
Query: 60 KEAVDKVFSTDSHVLEGSRLSIQP 83
V V ++ H L+G + +P
Sbjct: 61 PNCVGTVLASRPHTLDGRNIDPKP 84
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 25/84 (29%), Positives = 51/84 (60%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
NKIFVG +P EL+++F ++G + +++D +GFGF+TF+++++VD+ +
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 69 TDSHVLEGSRLSI---QPSDSHNR 89
H + G ++ + +P DS ++
Sbjct: 173 MHFHDIMGKKVEVKRAEPRDSKSQ 196
>ZFIN|ZDB-GENE-030131-185 [details] [associations]
symbol:hnrnpab "heterogeneous nuclear
ribonucleoprotein A/B" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-185
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104347 InterPro:IPR012956 Pfam:PF08143
EMBL:CU658205 IPI:IPI01023938 Ensembl:ENSDART00000148447
ArrayExpress:F8W4E3 Uniprot:F8W4E3
Length = 366
Score = 174 (66.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L W S +LK +FS++G++ + ++ D NTG S+GFGF+ F+ VDKV +
Sbjct: 96 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDKVLAQ 155
Query: 70 DSHVLEGSRL 79
H L+G ++
Sbjct: 156 KEHRLDGRQI 165
Score = 115 (45.5 bits), Expect = 0.00058, P = 0.00058
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L + ++++F +G+I + D + +GF F+TF+ +EAV K+
Sbjct: 178 VKKIFVGGLNPETTEERIREYFGAFGEIETIELPMDPKSNKRRGFVFITFKEEEAVKKIL 237
Query: 68 STDSHVLEGSR 78
H + G++
Sbjct: 238 EKKYHNVSGTK 248
>UNIPROTKB|E2R6E4 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 CTD:26528 KO:K14411 OMA:HNLDGRN
GeneTree:ENSGT00700000104255 EMBL:AAEX03012650 EMBL:AAEX03012651
RefSeq:XP_003432858.1 Ensembl:ENSCAFT00000031038 GeneID:100683271
KEGG:cfa:100683271 Uniprot:E2R6E4
Length = 407
Score = 175 (66.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 31/84 (36%), Positives = 53/84 (63%)
Query: 1 MSNS-IRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN 59
M+NS ++ K+FVG L W+ + L+ +FS+YG++++ +M DK T S+GFGFV F++
Sbjct: 1 MNNSGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD 60
Query: 60 KEAVDKVFSTDSHVLEGSRLSIQP 83
V V ++ H L+G + +P
Sbjct: 61 PNCVGTVLASRPHTLDGRNIDPKP 84
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 25/84 (29%), Positives = 51/84 (60%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
NKIFVG +P EL+++F ++G + +++D +GFGF+TF+++++VD+ +
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 69 TDSHVLEGSRLSI---QPSDSHNR 89
H + G ++ + +P DS ++
Sbjct: 173 MHFHDIMGKKVEVKRAEPRDSKSQ 196
>UNIPROTKB|Q96EP5 [details] [associations]
symbol:DAZAP1 "DAZ-associated protein 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0007283
GO:GO:0003723 eggNOG:COG0724 EMBL:AF181719 EMBL:BC012062
EMBL:AK056850 IPI:IPI00165230 IPI:IPI00335930 RefSeq:NP_061832.2
RefSeq:NP_733829.1 UniGene:Hs.222510 PDB:2DGS PDB:2DH8 PDBsum:2DGS
PDBsum:2DH8 ProteinModelPortal:Q96EP5 SMR:Q96EP5 IntAct:Q96EP5
STRING:Q96EP5 PhosphoSite:Q96EP5 DMDM:44887869
REPRODUCTION-2DPAGE:IPI00165230 PaxDb:Q96EP5 PRIDE:Q96EP5
DNASU:26528 Ensembl:ENST00000233078 Ensembl:ENST00000336761
GeneID:26528 KEGG:hsa:26528 UCSC:uc002lsm.3 UCSC:uc002lsn.3
CTD:26528 GeneCards:GC19P001407 HGNC:HGNC:2683 HPA:HPA004201
HPA:HPA004631 MIM:607430 neXtProt:NX_Q96EP5 PharmGKB:PA27153
HOGENOM:HOG000234441 HOVERGEN:HBG002295 InParanoid:Q96EP5 KO:K14411
OMA:HNLDGRN OrthoDB:EOG40ZQXT PhylomeDB:Q96EP5 ChiTaRS:DAZAP1
EvolutionaryTrace:Q96EP5 GenomeRNAi:26528 NextBio:48864
ArrayExpress:Q96EP5 Bgee:Q96EP5 CleanEx:HS_DAZAP1
Genevestigator:Q96EP5 GermOnline:ENSG00000071626 Uniprot:Q96EP5
Length = 407
Score = 175 (66.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 31/84 (36%), Positives = 53/84 (63%)
Query: 1 MSNS-IRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN 59
M+NS ++ K+FVG L W+ + L+ +FS+YG++++ +M DK T S+GFGFV F++
Sbjct: 1 MNNSGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD 60
Query: 60 KEAVDKVFSTDSHVLEGSRLSIQP 83
V V ++ H L+G + +P
Sbjct: 61 PNCVGTVLASRPHTLDGRNIDPKP 84
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 25/84 (29%), Positives = 51/84 (60%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
NKIFVG +P EL+++F ++G + +++D +GFGF+TF+++++VD+ +
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 69 TDSHVLEGSRLSI---QPSDSHNR 89
H + G ++ + +P DS ++
Sbjct: 173 MHFHDIMGKKVEVKRAEPRDSKSQ 196
>MGI|MGI:1330294 [details] [associations]
symbol:Hnrnpab "heterogeneous nuclear ribonucleoprotein A/B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003688 "DNA
replication origin binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1330294 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0000166 GO:GO:0003677
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0030529
GO:GO:0001837 UniGene:Mm.490267 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 KO:K13044
InterPro:IPR012956 Pfam:PF08143 CTD:3182 OrthoDB:EOG42BX9K
ChiTaRS:HNRNPAB EMBL:D90151 EMBL:L36663 EMBL:AK076132
IPI:IPI00117288 PIR:JQ0448 RefSeq:NP_034578.1 UniGene:Mm.280842
ProteinModelPortal:Q99020 SMR:Q99020 DIP:DIP-31415N IntAct:Q99020
MINT:MINT-4132837 STRING:Q99020 PhosphoSite:Q99020 PaxDb:Q99020
PRIDE:Q99020 Ensembl:ENSMUST00000074669 GeneID:15384 KEGG:mmu:15384
NextBio:288056 Bgee:Q99020 Genevestigator:Q99020
GermOnline:ENSMUSG00000020358 Uniprot:Q99020
Length = 285
Score = 170 (64.9 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE 61
S + K+FVG L W S +LK +F+++G++++ ++ D NTG S+GFGF+ F++
Sbjct: 68 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSS 127
Query: 62 AVDKVFSTDSHVLEG 76
+V+KV H L+G
Sbjct: 128 SVEKVLDQKEHRLDG 142
Score = 121 (47.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 26/96 (27%), Positives = 48/96 (50%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L + +++++F ++G+I + D +GF F+TF+ ++ V KV
Sbjct: 158 VKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVL 217
Query: 68 STDSHVLEGSRLSI---QPSDSHNRMAENMEDRFNQ 100
H + GS+ I QP + + + R N+
Sbjct: 218 EKKFHTVSGSKCEIKVAQPKEVYQQQQYGSGGRGNR 253
>UNIPROTKB|Q9QX80 [details] [associations]
symbol:Hnrnpab "Hnrpab protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0030529 EMBL:CH473948 HOGENOM:HOG000234441 HOVERGEN:HBG002295
HSSP:Q14103 GeneTree:ENSGT00700000104347 KO:K13044
InterPro:IPR012956 Pfam:PF08143 CTD:3182 EMBL:AC105470
EMBL:AF216753 EMBL:BC066664 EMBL:AJ238855 IPI:IPI00212723
PIR:PC4375 PIR:PC4376 PIR:PC4377 RefSeq:NP_112620.2
RefSeq:XP_003750864.1 UniGene:Rn.1427 UniGene:Rn.217734 SMR:Q9QX80
STRING:Q9QX80 Ensembl:ENSRNOT00000033056 GeneID:100910156
GeneID:83498 KEGG:rno:100910156 KEGG:rno:83498 NextBio:615904
Genevestigator:Q9QX80 Uniprot:Q9QX80
Length = 285
Score = 170 (64.9 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE 61
S + K+FVG L W S +LK +F+++G++++ ++ D NTG S+GFGF+ F++
Sbjct: 68 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSS 127
Query: 62 AVDKVFSTDSHVLEG 76
+V+KV H L+G
Sbjct: 128 SVEKVLDQKEHRLDG 142
Score = 121 (47.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 26/96 (27%), Positives = 48/96 (50%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L + +++++F ++G+I + D +GF F+TF+ ++ V KV
Sbjct: 158 VKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVL 217
Query: 68 STDSHVLEGSRLSI---QPSDSHNRMAENMEDRFNQ 100
H + GS+ I QP + + + R N+
Sbjct: 218 EKKFHTVSGSKCEIKVAQPKEVYQQQQYGSGGRGNR 253
>TAIR|locus:2157702 [details] [associations]
symbol:CP31B "chloroplast RNA-binding protein 31B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0045087 "innate immune response" evidence=IDA]
[GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009451 "RNA modification"
evidence=IMP] [GO:0000023 "maltose metabolic process" evidence=RCA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009697 "salicylic acid
biosynthetic process" evidence=RCA] [GO:0009814 "defense response,
incompatible interaction" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019684 "photosynthesis, light reaction"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0008266 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0009941 EMBL:AB024031
eggNOG:COG0724 GO:GO:0009451 HOGENOM:HOG000276232 HSSP:P11940
ProtClustDB:CLSN2915857 UniGene:At.46085 UniGene:At.7917
EMBL:AY039868 EMBL:AY077660 IPI:IPI00537317 RefSeq:NP_199836.1
ProteinModelPortal:Q9FGS0 SMR:Q9FGS0 STRING:Q9FGS0 PaxDb:Q9FGS0
PRIDE:Q9FGS0 EnsemblPlants:AT5G50250.1 GeneID:835090
KEGG:ath:AT5G50250 TAIR:At5g50250 InParanoid:Q9FGS0 OMA:AAFRIYV
PhylomeDB:Q9FGS0 Genevestigator:Q9FGS0 Uniprot:Q9FGS0
Length = 289
Score = 170 (64.9 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 31/81 (38%), Positives = 51/81 (62%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVD-KVFS 68
+I+VGNLPW V L++ FSE+G++++A V+ D+ TG S+GFGFV N+ V+ + +
Sbjct: 208 RIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAA 267
Query: 69 TDSHVLEGSRLSIQPSDSHNR 89
D LEG + + ++ R
Sbjct: 268 LDGQNLEGRAIKVNVAEERTR 288
Score = 136 (52.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 34/115 (29%), Positives = 59/115 (51%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDK-VFS 68
K+FVGNLP+ V L F + G + + V+++++T S+GFGFVT E +K V
Sbjct: 114 KLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEK 173
Query: 69 TDSHVLEGSRLSIQPSDSHNRMAENMEDRFNQACD-YLPSLVKKLDSSTLLKFYA 122
+S + G RL++ + E ++ A Y+ +L +DS L + ++
Sbjct: 174 FNSFEVNGRRLTVNRAAPRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFS 228
>DICTYBASE|DDB_G0275971 [details] [associations]
symbol:DDB_G0275971 "RNA recognition motif-containing
protein RRM" species:44689 "Dictyostelium discoideum" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 dictyBase:DDB_G0275971
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AAFI02000013
eggNOG:NOG260394 RefSeq:XP_643377.1 ProteinModelPortal:Q552K5
EnsemblProtists:DDB0203538 GeneID:8620261 KEGG:ddi:DDB_G0275971
InParanoid:Q552K5 Uniprot:Q552K5
Length = 699
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 32/88 (36%), Positives = 54/88 (61%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE 61
S+S + KIFVG + W N LK +F ++G ++ ++ D NT SKG+GF+TF+N++
Sbjct: 96 SSSSSKCTKIFVGGISWKADENTLKTYFLQFGNVLECKIIMDYNTNKSKGYGFITFENED 155
Query: 62 AVDKVFSTDSHVLEGSRLSI-QPSDSHN 88
+++KV T + + G ++I P HN
Sbjct: 156 SIEKV-RTSNLLFMGKNMNIGDPVRKHN 182
>TAIR|locus:2044370 [details] [associations]
symbol:AT2G46780 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000276232 EMBL:BT022057
IPI:IPI00944264 RefSeq:NP_182201.4 UniGene:At.22279
ProteinModelPortal:Q501B0 SMR:Q501B0 PRIDE:Q501B0
EnsemblPlants:AT2G46780.1 GeneID:819291 KEGG:ath:AT2G46780
TAIR:At2g46780 OMA:FPYSTYG PhylomeDB:Q501B0 ProtClustDB:CLSN2722623
Genevestigator:Q501B0 Uniprot:Q501B0
Length = 336
Score = 172 (65.6 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 31/72 (43%), Positives = 48/72 (66%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
+L KIFVG L W + ++++F ++G+I+ A V+ DKNTG SKG+GFVTF+ EA +
Sbjct: 20 KLTKIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEAEAAMRA 79
Query: 67 FSTDSHVLEGSR 78
+ V++G R
Sbjct: 80 CQNMNPVIDGRR 91
>RGD|69255 [details] [associations]
symbol:Hnrnpab "heterogeneous nuclear ribonucleoprotein A/B"
species:10116 "Rattus norvegicus" [GO:0001837 "epithelial to
mesenchymal transition" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003688 "DNA replication origin binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0045892 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003688 HOVERGEN:HBG002295 HSSP:Q14103 InterPro:IPR012956
Pfam:PF08143 PIR:PC4375 PIR:PC4376 PIR:PC4377 UniGene:Rn.1427
UniGene:Rn.217734 EMBL:AF108653 IPI:IPI00208193
ProteinModelPortal:Q9Z0U8 SMR:Q9Z0U8 IntAct:Q9Z0U8 MINT:MINT-7138483
STRING:Q9Z0U8 PRIDE:Q9Z0U8 UCSC:RGD:69255 Genevestigator:Q9Z0U8
Uniprot:Q9Z0U8
Length = 298
Score = 170 (64.9 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE 61
S + K+FVG L W S +LK +F+++G++++ ++ D NTG S+GFGF+ F++
Sbjct: 81 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSS 140
Query: 62 AVDKVFSTDSHVLEG 76
+V+KV H L+G
Sbjct: 141 SVEKVLDQKEHRLDG 155
Score = 121 (47.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 26/96 (27%), Positives = 48/96 (50%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L + +++++F ++G+I + D +GF F+TF+ ++ V KV
Sbjct: 171 VKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVL 230
Query: 68 STDSHVLEGSRLSI---QPSDSHNRMAENMEDRFNQ 100
H + GS+ I QP + + + R N+
Sbjct: 231 EKKFHTVSGSKCEIKVAQPKEVYQQQQYGSGGRGNR 266
>TAIR|locus:2011726 [details] [associations]
symbol:AT1G76460 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 UniGene:At.43912
UniGene:At.70089 IPI:IPI00542968 RefSeq:NP_565132.2
UniGene:At.69045 ProteinModelPortal:F4I2E4 SMR:F4I2E4 PRIDE:F4I2E4
EnsemblPlants:AT1G76460.1 GeneID:843979 KEGG:ath:AT1G76460
OMA:YGPEYMY Uniprot:F4I2E4
Length = 285
Score = 169 (64.5 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L W L++ F +YG+I+ A V+ DKNTG SKG+GFVTF++ EA + +
Sbjct: 25 KVFVGGLAWETQSETLRQHFEQYGEILEAVVIADKNTGRSKGYGFVTFRDPEAARRACAD 84
Query: 70 DSHVLEGSR 78
+ +++G R
Sbjct: 85 PTPIIDGRR 93
>UNIPROTKB|J3QKT5 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
EMBL:AC015883 EMBL:AC091181 ProteinModelPortal:J3QKT5
Ensembl:ENST00000581776 Uniprot:J3QKT5
Length = 99
Score = 153 (58.9 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W S + L+ +FS++G+I VM D T S+GFGFVTF + +VDKV
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 70 DSHVLE 75
H L+
Sbjct: 82 PHHELD 87
>UNIPROTKB|F1PA19 [details] [associations]
symbol:HNRNPAB "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104347 EMBL:AAEX03007693 EMBL:AAEX03007694
Ensembl:ENSCAFT00000000377 OMA:GNDSSYG Uniprot:F1PA19
Length = 264
Score = 167 (63.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 27/67 (40%), Positives = 46/67 (68%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L W S +LK +F+++G++++ ++ D NTG S+GFGF+ F++ +V+KV
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 70 DSHVLEG 76
H L+G
Sbjct: 61 KEHRLDG 67
Score = 123 (48.4 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L + +++++F E+G+I + D + +GF F+TF+ +E V KV
Sbjct: 83 VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVL 142
Query: 68 STDSHVLEGSR 78
H + GS+
Sbjct: 143 EKKFHTISGSK 153
>UNIPROTKB|D6R9P3 [details] [associations]
symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
ChiTaRS:HNRNPAB IPI:IPI00964686 ProteinModelPortal:D6R9P3
SMR:D6R9P3 Ensembl:ENST00000515193 ArrayExpress:D6R9P3 Bgee:D6R9P3
Uniprot:D6R9P3
Length = 280
Score = 168 (64.2 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE 61
S + K+FVG L W S +LK +F+++G++++ ++ D NTG S+GFGF+ F++
Sbjct: 63 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAA 122
Query: 62 AVDKVFSTDSHVLEG 76
+V+KV H L+G
Sbjct: 123 SVEKVLDQKEHRLDG 137
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L + +++++F E+G+I + D +GF F+TF+ +E V KV
Sbjct: 153 VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVL 212
Query: 68 STDSHVLEGSRLSI---QPSDSHNRMAENMEDRFNQ 100
H + GS+ I QP + + + R N+
Sbjct: 213 EKKFHTVSGSKCEIKVAQPKEVYQQQQYGSGGRGNR 248
>FB|FBgn0263396 [details] [associations]
symbol:sqd "squid" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IC;IDA;TAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0008069 "dorsal/ventral axis specification, ovarian follicular
epithelium" evidence=IMP] [GO:0007297 "ovarian follicle cell
migration" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP;TAS]
[GO:0008298 "intracellular mRNA localization" evidence=NAS;TAS]
[GO:0017148 "negative regulation of translation" evidence=TAS]
[GO:0003730 "mRNA 3'-UTR binding" evidence=TAS] [GO:0009953
"dorsal/ventral pattern formation" evidence=IMP;TAS] [GO:0006405
"RNA export from nucleus" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=ISS;NAS] [GO:0003729 "mRNA
binding" evidence=ISS;NAS] [GO:0035062 "omega speckle"
evidence=IDA] [GO:0000785 "chromatin" evidence=IDA] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=NAS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0019094 "pole plasm mRNA localization"
evidence=IMP] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0016325 "oocyte microtubule cytoskeleton organization"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0007314 "oocyte anterior/posterior axis
specification" evidence=IMP] [GO:0045451 "pole plasm oskar mRNA
localization" evidence=IEP] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0033119 "negative regulation of RNA splicing"
evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:AE014297 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0000785 GO:GO:0003730 GO:GO:0006406 GO:GO:0033119
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 GO:GO:0030720
GO:GO:0007297 eggNOG:COG0724 GO:GO:0045451 GO:GO:0005703
GO:GO:0000381 GO:GO:0016325 GO:GO:0008069
GeneTree:ENSGT00700000104255 GO:GO:0035062 EMBL:X62637 EMBL:X62638
EMBL:S61875 EMBL:S62100 EMBL:AY118501 EMBL:BT001384 EMBL:BT003283
EMBL:BT023832 EMBL:S51693 PIR:A47369 PIR:B41732 PIR:B47369
PIR:C48110 RefSeq:NP_001247088.1 RefSeq:NP_652209.1
RefSeq:NP_731825.1 RefSeq:NP_731826.1 RefSeq:NP_996203.1
UniGene:Dm.7189 ProteinModelPortal:Q08473 SMR:Q08473 IntAct:Q08473
MINT:MINT-847475 STRING:Q08473 PaxDb:Q08473
EnsemblMetazoa:FBtr0082855 GeneID:41666 KEGG:dme:Dmel_CG16901
CTD:41666 FlyBase:FBgn0263396 InParanoid:Q08473 KO:K03102
OMA:GDIDSIN OrthoDB:EOG43BK52 PhylomeDB:Q08473 ChiTaRS:sqd
GenomeRNAi:41666 NextBio:824926 Bgee:Q08473 GermOnline:CG16901
Uniprot:Q08473
Length = 344
Score = 171 (65.3 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L W + EL+ F +YG+I + +V D TG S+GF F+ F N EA+DKV +
Sbjct: 57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAA 116
Query: 70 DSHVLEGSRL 79
D H++ ++
Sbjct: 117 DEHIINSKKV 126
Score = 134 (52.2 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
KIFVG L +S E+K +F ++G I+ + FDK KGF F+TF +++ V + T
Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 70 DSHVLEGSRLSIQ 82
+ G + ++
Sbjct: 197 PKQKIAGKEVDVK 209
>UNIPROTKB|J9P972 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104255 EMBL:AAEX03012650 EMBL:AAEX03012651
Ensembl:ENSCAFT00000049246 Uniprot:J9P972
Length = 258
Score = 166 (63.5 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
L K+FVG L W+ + L+ +FS+YG++++ +M DK T S+GFGFV F++ V V
Sbjct: 54 LRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 113
Query: 68 STDSHVLEGSRL 79
++ H L+G +
Sbjct: 114 ASRPHTLDGRNI 125
Score = 147 (56.8 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 25/84 (29%), Positives = 51/84 (60%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
NKIFVG +P EL+++F ++G + +++D +GFGF+TF+++++VD+ +
Sbjct: 140 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 199
Query: 69 TDSHVLEGSRLSI---QPSDSHNR 89
H + G ++ + +P DS ++
Sbjct: 200 MHFHDIMGKKVEVKRAEPRDSKSQ 223
>UNIPROTKB|D6RD18 [details] [associations]
symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
ChiTaRS:HNRNPAB IPI:IPI00966854 ProteinModelPortal:D6RD18
SMR:D6RD18 Ensembl:ENST00000514633 ArrayExpress:D6RD18 Bgee:D6RD18
Uniprot:D6RD18
Length = 283
Score = 168 (64.2 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE 61
S + K+FVG L W S +LK +F+++G++++ ++ D NTG S+GFGF+ F++
Sbjct: 63 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAA 122
Query: 62 AVDKVFSTDSHVLEG 76
+V+KV H L+G
Sbjct: 123 SVEKVLDQKEHRLDG 137
Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L + +++++F E+G+I + D +GF F+TF+ +E V KV
Sbjct: 153 VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVL 212
Query: 68 STDSHVLEGSRLSI---QPSDSHNRMAENMEDRFNQ 100
H + GS+ I QP + + + R N+
Sbjct: 213 EKKFHTVSGSKCEIKVAQPKEVYQQQQYGSGGRGNR 248
>UNIPROTKB|Q5T8D3 [details] [associations]
symbol:ACBD5 "Acyl-CoA-binding domain-containing protein 5"
species:9606 "Homo sapiens" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000582
Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228 GO:GO:0043231
GO:GO:0016021 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0006810
GO:GO:0005778 EMBL:CH471072 GO:GO:0000062 eggNOG:COG4281
GO:GO:0008289 InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880
CTD:91452 HOVERGEN:HBG106445 InterPro:IPR016347 PIRSF:PIRSF002412
EMBL:AF505653 EMBL:AK057469 EMBL:AL160291 EMBL:BC030555
EMBL:AL133064 IPI:IPI00186681 IPI:IPI00550377 IPI:IPI00640010
IPI:IPI00644427 PIR:T42665 RefSeq:NP_001035938.1 RefSeq:NP_663736.2
UniGene:Hs.530597 PDB:3FLV PDBsum:3FLV ProteinModelPortal:Q5T8D3
SMR:Q5T8D3 IntAct:Q5T8D3 STRING:Q5T8D3 PhosphoSite:Q5T8D3
DMDM:74745508 PaxDb:Q5T8D3 PRIDE:Q5T8D3 DNASU:91452
Ensembl:ENST00000375888 Ensembl:ENST00000375901
Ensembl:ENST00000375905 Ensembl:ENST00000396271
Ensembl:ENST00000412279 GeneID:91452 KEGG:hsa:91452 UCSC:uc001ito.3
UCSC:uc001itp.3 UCSC:uc001itr.1 UCSC:uc010qdp.2
GeneCards:GC10M027484 HGNC:HGNC:23338 HPA:HPA011861 HPA:HPA012145
neXtProt:NX_Q5T8D3 PharmGKB:PA134892991 OMA:GRGHRMQ ChiTaRS:ACBD5
EvolutionaryTrace:Q5T8D3 GenomeRNAi:91452 NextBio:77259
ArrayExpress:Q5T8D3 Bgee:Q5T8D3 CleanEx:HS_ACBD5
Genevestigator:Q5T8D3 Uniprot:Q5T8D3
Length = 534
Score = 158 (60.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 95 EDRFNQACDYLPSLVK----KLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNA 150
E RF A + SL K + + +LKFY+ YKQAT G C + +P +++ + K++A
Sbjct: 42 ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 101
Query: 151 WNSLGQMAKSEAMSKYIALLKEV 173
W+SLG M K EAM Y+ +K++
Sbjct: 102 WSSLGDMTKEEAMIAYVEEMKKI 124
Score = 59 (25.8 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 32/143 (22%), Positives = 63/143 (44%)
Query: 191 PNQKAMSKYIALLNEVDASWEDKEQEEINWDESQESGSK--ENEGQTKGW-VNVSSMIND 247
PN K ++ + S E++ QEE+ E ++ K + K V V++ +
Sbjct: 182 PNAKTVNGKAESSDSGAESEEEEAQEEVKGAEQSDNDKKMMKKSADHKNLEVIVTNGYDK 241
Query: 248 ESQLDDNEKNIYEWAK-EGKLDMLVKQLTKLKDFNINQLDENGLNCLHWACDRGHLKVV- 305
+ + D + +I+ + G+ VK + D N+ Q ++ + C+H + H++ V
Sbjct: 242 DGFVQDIQNDIHASSSLNGRSTEEVKPI----DENLGQTGKSAV-CIHQDINDDHVEDVT 296
Query: 306 --QHLIEKCGADVNVTDSDGDYG 326
QHL ++V DS +G
Sbjct: 297 GIQHLTSDSDSEV-YCDSMEQFG 318
>UNIPROTKB|Q3ZC44 [details] [associations]
symbol:HNRNPAB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
Pfam:PF08143 CTD:3182 OMA:FILFKDP EMBL:DAAA02020063
EMBL:DAAA02020062 EMBL:BC102923 IPI:IPI00843025
RefSeq:NP_001035612.1 UniGene:Bt.58979 SMR:Q3ZC44
Ensembl:ENSBTAT00000018114 GeneID:513410 KEGG:bta:513410
NextBio:20870841 Uniprot:Q3ZC44
Length = 285
Score = 168 (64.2 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE 61
S + K+FVG L W S +LK +F+++G++++ ++ D NTG S+GFGF+ F++
Sbjct: 63 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAT 122
Query: 62 AVDKVFSTDSHVLEG 76
+V+KV H L+G
Sbjct: 123 SVEKVLDQKEHRLDG 137
Score = 130 (50.8 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L + +++++F E+G+I + D + +GF F+TF+ +E V KV
Sbjct: 153 VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVL 212
Query: 68 STDSHVLEGSRLSI---QPSDSHNRMAENMEDRFNQ 100
H + GS+ I QP + + + R N+
Sbjct: 213 EKKFHTISGSKCEIKVAQPKEVYQQQQYGSGGRGNR 248
>UNIPROTKB|F1NDC3 [details] [associations]
symbol:DBI "Acyl-CoA-binding protein" species:9031 "Gallus
gallus" [GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
GeneTree:ENSGT00680000099745 InterPro:IPR022408 SUPFAM:SSF47027
PROSITE:PS00880 OMA:CNTDKPG EMBL:AADN02016908 IPI:IPI00582846
Ensembl:ENSGALT00000037901 Uniprot:F1NDC3
Length = 87
Score = 152 (58.6 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 95 EDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSL 154
E F +A + + L + +L Y+ YKQATVG N D+P + + K+K++AWN+L
Sbjct: 3 EAAFQKAAEEVKQLKSQPTDQEMLDVYSHYKQATVGDVNTDRPGMLDFKGKAKWDAWNAL 62
Query: 155 GQMAKSEAMSKYIALLKEV 173
M+K +AM Y+A ++E+
Sbjct: 63 KGMSKEDAMKAYVAKVEEL 81
>UNIPROTKB|Q9PRL8 [details] [associations]
symbol:DBI "Acyl-CoA-binding protein" species:9031 "Gallus
gallus" [GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] InterPro:IPR000582
Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228 GO:GO:0005783
GO:GO:0005794 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0006810
GO:GO:0000062 eggNOG:COG4281 GO:GO:0008289 InterPro:IPR022408
SUPFAM:SSF47027 PROSITE:PS00880 HOVERGEN:HBG000398
OrthoDB:EOG4GF3GS IPI:IPI00592364 PIR:S63595
ProteinModelPortal:Q9PRL8 SMR:Q9PRL8 STRING:Q9PRL8 PRIDE:Q9PRL8
InParanoid:Q9PRL8 Uniprot:Q9PRL8
Length = 86
Score = 152 (58.6 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 95 EDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSL 154
E F +A + + L + +L Y+ YKQATVG N D+P + + K+K++AWN+L
Sbjct: 2 EAAFQKAAEEVKELKSQPTDQEMLDVYSHYKQATVGDVNTDRPGMLDFKGKAKWDAWNAL 61
Query: 155 GQMAKSEAMSKYIALLKEV 173
M+K +AM Y+A ++E+
Sbjct: 62 KGMSKEDAMKAYVAKVEEL 80
>TAIR|locus:4515103555 [details] [associations]
symbol:AT5G11412 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005576 "extracellular region"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:CP002688 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:DQ487706 IPI:IPI00775531 RefSeq:NP_001119208.1
UniGene:At.69225 ProteinModelPortal:Q1G378 SMR:Q1G378 STRING:Q1G378
EnsemblPlants:AT5G11412.1 GeneID:6240527 KEGG:ath:AT5G11412
TAIR:At5g11412 OMA:IDGREAK PhylomeDB:Q1G378 ProtClustDB:CLSN2925591
Genevestigator:Q1G378 Uniprot:Q1G378
Length = 175
Score = 152 (58.6 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 28/98 (28%), Positives = 52/98 (53%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
KI+VG LPW + L+ +F ++G I++ +++ D+ TG S+G+GFVTF++ E+ +
Sbjct: 53 KIYVGGLPWETRNEGLRSYFEQFGDIIHVNMVCDRETGRSEGYGFVTFRDAESATRACQN 112
Query: 70 DSHVLEGSRLSIQPSDSHNRMAENMEDRFNQACDYLPS 107
V++G + R+ N + Q P+
Sbjct: 113 PKPVIDGREAKCNLAYIGGRVNNNQNAQQQQVLPMYPT 150
>TAIR|locus:2122009 [details] [associations]
symbol:RBP31 "AT4G24770" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA;TAS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0045087 "innate
immune response" evidence=IDA] [GO:0008266 "poly(U) RNA binding"
evidence=IDA] [GO:0009451 "RNA modification" evidence=IMP]
[GO:0009073 "aromatic amino acid family biosynthetic process"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0045036
"protein targeting to chloroplast" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0009631 "cold acclimation" evidence=IMP] [GO:0016553 "base
conversion or substitution editing" evidence=IMP] [GO:0043489 "RNA
stabilization" evidence=IMP] [GO:0006396 "RNA processing"
evidence=TAS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0008266 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0009941 GO:GO:0009631
GO:GO:0016553 GO:GO:0006396 GO:GO:0030529 EMBL:AL035356
EMBL:AL161562 GO:GO:0009535 eggNOG:COG0724 HOGENOM:HOG000276232
EMBL:M94554 EMBL:X65255 EMBL:U08467 EMBL:D31712 EMBL:D31713
IPI:IPI00523699 IPI:IPI00542634 IPI:IPI00760320 PIR:S28057
PIR:S53492 RefSeq:NP_194208.1 UniGene:At.38112 UniGene:At.70990
ProteinModelPortal:Q04836 SMR:Q04836 STRING:Q04836 PaxDb:Q04836
PRIDE:Q04836 ProMEX:Q04836 EnsemblPlants:AT4G24770.1 GeneID:828579
KEGG:ath:AT4G24770 GeneFarm:4009 TAIR:At4g24770 InParanoid:Q04836
OMA:NRYDLNG PhylomeDB:Q04836 ProtClustDB:CLSN2915857
Genevestigator:Q04836 GermOnline:AT4G24770 GO:GO:0043489
Uniprot:Q04836
Length = 329
Score = 170 (64.9 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 29/77 (37%), Positives = 52/77 (67%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
+++VGNLPW V + L++ FSE+G+++ A V++D+ TG S+GFGFVT + + +++ S
Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304
Query: 70 -DSHVLEGSRLSIQPSD 85
D LEG + + ++
Sbjct: 305 LDGQNLEGRAIRVNVAE 321
Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
Identities = 32/115 (27%), Positives = 56/115 (48%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN-KEAVDKVFS 68
K+FVGNL + V+ L F + G + A V++++ T S+GFGFVT + EA V
Sbjct: 151 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 210
Query: 69 TDSHVLEGSRLSIQPSDSHNRMAENMEDRFNQACD-YLPSLVKKLDSSTLLKFYA 122
+ + L G L++ + E + A Y+ +L +D+ L + ++
Sbjct: 211 FNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFS 265
>UNIPROTKB|E9PTS0 [details] [associations]
symbol:Hnrnpab "Protein Hnrnpab" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
InterPro:IPR012956 Pfam:PF08143 EMBL:AC105470 IPI:IPI00951862
Ensembl:ENSRNOT00000065584 ArrayExpress:E9PTS0 Uniprot:E9PTS0
Length = 331
Score = 170 (64.9 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE 61
S + K+FVG L W S +LK +F+++G++++ ++ D NTG S+GFGF+ F++
Sbjct: 67 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSS 126
Query: 62 AVDKVFSTDSHVLEG 76
+V+KV H L+G
Sbjct: 127 SVEKVLDQKEHRLDG 141
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 26/96 (27%), Positives = 48/96 (50%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L + +++++F ++G+I + D +GF F+TF+ ++ V KV
Sbjct: 157 VKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVL 216
Query: 68 STDSHVLEGSRLSI---QPSDSHNRMAENMEDRFNQ 100
H + GS+ I QP + + + R N+
Sbjct: 217 EKKFHTVSGSKCEIKVAQPKEVYQQQQYGSGGRGNR 252
>UNIPROTKB|Q9QX81 [details] [associations]
symbol:Hnrnpab "RCG34663, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001837 "epithelial to mesenchymal transition" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 GO:GO:0001837
EMBL:CH473948 HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103
GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
Pfam:PF08143 OMA:FILFKDP OrthoDB:EOG42BX9K EMBL:AC105470 PIR:PC4375
PIR:PC4376 PIR:PC4377 UniGene:Rn.1427 UniGene:Rn.217734
GeneID:100910156 KEGG:rno:100910156 EMBL:AJ238854 IPI:IPI00212724
RefSeq:XP_003750865.1 SMR:Q9QX81 STRING:Q9QX81
Ensembl:ENSRNOT00000004885 InParanoid:Q9QX81 Genevestigator:Q9QX81
Uniprot:Q9QX81
Length = 332
Score = 170 (64.9 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE 61
S + K+FVG L W S +LK +F+++G++++ ++ D NTG S+GFGF+ F++
Sbjct: 68 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSS 127
Query: 62 AVDKVFSTDSHVLEG 76
+V+KV H L+G
Sbjct: 128 SVEKVLDQKEHRLDG 142
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 26/96 (27%), Positives = 48/96 (50%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L + +++++F ++G+I + D +GF F+TF+ ++ V KV
Sbjct: 158 VKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVL 217
Query: 68 STDSHVLEGSRLSI---QPSDSHNRMAENMEDRFNQ 100
H + GS+ I QP + + + R N+
Sbjct: 218 EKKFHTVSGSKCEIKVAQPKEVYQQQQYGSGGRGNR 253
>ZFIN|ZDB-GENE-070212-1 [details] [associations]
symbol:dazap1 "DAZ associated protein 1" species:7955
"Danio rerio" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-070212-1 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 OMA:HNLDGRN GeneTree:ENSGT00700000104255
EMBL:BX255969 EMBL:BX323045 IPI:IPI00961610
Ensembl:ENSDART00000104362 Bgee:F1QBG2 Uniprot:F1QBG2
Length = 407
Score = 172 (65.6 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 29/77 (37%), Positives = 49/77 (63%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
++ K+FVG L W+ + L+ +FS+YG++++ +M DK+T S+GFGFV F++ V V
Sbjct: 9 EIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTV 68
Query: 67 FSTDSHVLEGSRLSIQP 83
T H L+G + +P
Sbjct: 69 LDTKPHNLDGRNIDPKP 85
Score = 133 (51.9 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 24/80 (30%), Positives = 46/80 (57%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
KIFVG +P EL+ +F+ +G + +++D +GFGF+TF+ +++VD+ +
Sbjct: 114 KIFVGGIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNM 173
Query: 70 DSHVLEGSRLSI---QPSDS 86
H + G ++ + +P DS
Sbjct: 174 HFHDIMGKKVEVKKAEPRDS 193
>FB|FBgn0260943 [details] [associations]
symbol:Rbp6 "RNA-binding protein 6" species:7227 "Drosophila
melanogaster" [GO:0003729 "mRNA binding" evidence=NAS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
EMBL:AE014296 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0005844 eggNOG:COG0724 KO:K14411 GeneTree:ENSGT00700000104255
GO:GO:0048864 OMA:ENYISAA EMBL:AY122226 EMBL:S51715 PIR:F48110
RefSeq:NP_001097631.1 RefSeq:NP_001097632.1 RefSeq:NP_730245.2
UniGene:Dm.22292 HSSP:Q61474 ProteinModelPortal:Q9VVE5 SMR:Q9VVE5
DIP:DIP-19056N IntAct:Q9VVE5 MINT:MINT-918255
EnsemblMetazoa:FBtr0075285 GeneID:39919 KEGG:dme:Dmel_CG32169
UCSC:CG32169-RA CTD:39919 FlyBase:FBgn0260943 InParanoid:Q9VVE5
OrthoDB:EOG4MSBF6 GenomeRNAi:39919 NextBio:816085 Bgee:Q9VVE5
Uniprot:Q9VVE5
Length = 369
Score = 171 (65.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 35/92 (38%), Positives = 51/92 (55%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W S L+ +F YG I A VM D T S+GFGFVTF + +VDKV +
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 70 DSHVLEGSRLSIQ---PSDSHNRMAENMEDRF 98
+H L+G ++ + P +H +M + F
Sbjct: 90 GTHELDGKKVDPKVAFPRRAHPKMVTRTKKIF 121
Score = 153 (58.9 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 5 IRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVD 64
+ + KIFVG L + ++K +F ++G I +A +MFDK T +GFGFVTFQ+++ VD
Sbjct: 114 VTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVD 173
Query: 65 KVFSTDSH 72
KV H
Sbjct: 174 KVCEIHFH 181
>UNIPROTKB|F1NCW4 [details] [associations]
symbol:HNRNPD "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042162 "telomeric DNA binding"
evidence=IEA] [GO:0043488 "regulation of mRNA stability"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0043488 GO:GO:0042162
GeneTree:ENSGT00700000104347 OMA:PNQNWNQ EMBL:AADN02009040
IPI:IPI00819680 Ensembl:ENSGALT00000038011 ArrayExpress:F1NCW4
Uniprot:F1NCW4
Length = 258
Score = 165 (63.1 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + +LK +FS++G++++ ++ D TG S+GFGFV F+ E+VDKV
Sbjct: 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 60
Query: 70 DSHVLEG 76
H L G
Sbjct: 61 KEHKLNG 67
Score = 112 (44.5 bits), Expect = 0.00062, P = 0.00062
Identities = 22/88 (25%), Positives = 45/88 (51%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L +++++F +G++ + + D T +GF F+TF+ +E V K+
Sbjct: 84 VKKIFVGGLSPDTPEEKIREYFGAFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 143
Query: 68 STDSHVLEGSRLSIQPSDSHNRMAENME 95
H + S+ I+ + S + + +
Sbjct: 144 EKKYHNVGLSKCEIKVAMSKEQYQQQQQ 171
>WB|WBGene00008224 [details] [associations]
symbol:C50B8.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HSSP:P09651
eggNOG:NOG291073 GeneTree:ENSGT00390000008624 EMBL:Z77654
PIR:T20095 RefSeq:NP_506360.1 ProteinModelPortal:Q18724 SMR:Q18724
STRING:Q18724 PaxDb:Q18724 EnsemblMetazoa:C50B8.1.1
EnsemblMetazoa:C50B8.1.2 GeneID:179840 KEGG:cel:CELE_C50B8.1
UCSC:C50B8.1 CTD:179840 WormBase:C50B8.1 HOGENOM:HOG000019397
InParanoid:Q18724 OMA:QVQRNRR NextBio:907080 Uniprot:Q18724
Length = 114
Score = 151 (58.2 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 21/73 (28%), Positives = 45/73 (61%)
Query: 11 IFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFSTD 70
+++ ++ W ++L+ +F YG I + ++ +D +TGL +GF +TF +K+ +K
Sbjct: 27 VYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQR 86
Query: 71 SHVLEGSRLSIQP 83
HV++G R+ ++P
Sbjct: 87 PHVIDGDRVDVEP 99
>UNIPROTKB|H0Y8G5 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC124016 HGNC:HGNC:5036
ChiTaRS:HNRNPD Ensembl:ENST00000509263 Bgee:H0Y8G5 Uniprot:H0Y8G5
Length = 261
Score = 165 (63.1 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + +LK +FS++G++++ ++ D TG S+GFGFV F+ E+VDKV
Sbjct: 31 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 90
Query: 70 DSHVLEG 76
H L G
Sbjct: 91 KEHKLNG 97
Score = 111 (44.1 bits), Expect = 0.00082, P = 0.00082
Identities = 22/88 (25%), Positives = 45/88 (51%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L +++++F +G++ + + D T +GF F+TF+ +E V K+
Sbjct: 114 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 173
Query: 68 STDSHVLEGSRLSIQPSDSHNRMAENME 95
H + S+ I+ + S + + +
Sbjct: 174 EKKYHNVGLSKCEIKVAMSKEQYQQQQQ 201
>RGD|1305280 [details] [associations]
symbol:Dazap1 "DAZ associated protein 1" species:10116 "Rattus
norvegicus" [GO:0001893 "maternal placenta development"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0008283 "cell proliferation" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005844 "polysome" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1305280 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CH474029 eggNOG:COG0724
CTD:26528 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
OrthoDB:EOG40ZQXT OMA:GGYDMYN IPI:IPI00365961 EMBL:BC098930
RefSeq:NP_001020913.1 UniGene:Rn.16769 SMR:Q4KLZ3 GeneID:362836
KEGG:rno:362836 UCSC:RGD:1305280 InParanoid:Q4KLZ3 NextBio:681451
Genevestigator:Q4KLZ3 Uniprot:Q4KLZ3
Length = 405
Score = 171 (65.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
++ K+FVG L W+ + L+ +FS+YG++++ +M DK T S+GFGFV F++ V V
Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67
Query: 67 FSTDSHVLEGSRLSIQP 83
++ H L+G + +P
Sbjct: 68 LASRPHTLDGRNIDPKP 84
Score = 152 (58.6 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 26/84 (30%), Positives = 51/84 (60%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
NKIFVG +P EL+++F ++G + +++D +GFGF+TF+++++VD+ +
Sbjct: 112 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 171
Query: 69 TDSHVLEGSRLSI---QPSDSHNR 89
H + G ++ + +P DS N+
Sbjct: 172 MHFHDIMGKKVEVKRAEPRDSKNQ 195
>MGI|MGI:1917498 [details] [associations]
symbol:Dazap1 "DAZ associated protein 1" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005844 "polysome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0035613 "RNA stem-loop binding"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1917498 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 eggNOG:COG0724
CTD:26528 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
ChiTaRS:DAZAP1 EMBL:AF225910 EMBL:BC049355 IPI:IPI00406492
IPI:IPI00406493 RefSeq:NP_001116076.1 RefSeq:NP_001116077.1
RefSeq:NP_573451.2 UniGene:Mm.148693 ProteinModelPortal:Q9JII5
SMR:Q9JII5 STRING:Q9JII5 PhosphoSite:Q9JII5
REPRODUCTION-2DPAGE:Q9JII5 PaxDb:Q9JII5 PRIDE:Q9JII5
Ensembl:ENSMUST00000092305 Ensembl:ENSMUST00000105362 GeneID:70248
KEGG:mmu:70248 UCSC:uc007gcl.2 UCSC:uc007gcm.2
GeneTree:ENSGT00700000104255 InParanoid:Q9JII5 NextBio:331250
Bgee:Q9JII5 CleanEx:MM_DAZAP1 Genevestigator:Q9JII5
GermOnline:ENSMUSG00000069565 Uniprot:Q9JII5
Length = 406
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
++ K+FVG L W+ + L+ +FS+YG++++ +M DK T S+GFGFV F++ V V
Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67
Query: 67 FSTDSHVLEGSRLSIQP 83
++ H L+G + +P
Sbjct: 68 LASRPHTLDGRNIDPKP 84
Score = 152 (58.6 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 26/84 (30%), Positives = 51/84 (60%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
NKIFVG +P EL+++F ++G + +++D +GFGF+TF+++++VD+ +
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 69 TDSHVLEGSRLSI---QPSDSHNR 89
H + G ++ + +P DS N+
Sbjct: 173 MHFHDIMGKKVEVKRAEPRDSKNQ 196
>UNIPROTKB|F2Z3S1 [details] [associations]
symbol:Dazap1 "Protein Dazap1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1305280 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104255 IPI:IPI00365961
ProteinModelPortal:F2Z3S1 SMR:F2Z3S1 PRIDE:F2Z3S1
Ensembl:ENSRNOT00000046886 Uniprot:F2Z3S1
Length = 406
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
++ K+FVG L W+ + L+ +FS+YG++++ +M DK T S+GFGFV F++ V V
Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67
Query: 67 FSTDSHVLEGSRLSIQP 83
++ H L+G + +P
Sbjct: 68 LASRPHTLDGRNIDPKP 84
Score = 152 (58.6 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 26/84 (30%), Positives = 51/84 (60%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
NKIFVG +P EL+++F ++G + +++D +GFGF+TF+++++VD+ +
Sbjct: 113 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
Query: 69 TDSHVLEGSRLSI---QPSDSHNR 89
H + G ++ + +P DS N+
Sbjct: 173 MHFHDIMGKKVEVKRAEPRDSKNQ 196
>UNIPROTKB|F1NIB2 [details] [associations]
symbol:HNRNPAB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
GeneTree:ENSGT00700000104347 OMA:FILFKDP EMBL:AADN02028501
EMBL:AADN02028502 EMBL:AADN02028503 IPI:IPI00574172
Ensembl:ENSGALT00000023234 ArrayExpress:F1NIB2 Uniprot:F1NIB2
Length = 263
Score = 165 (63.1 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L W S +LK +F+++G++ + ++ D NTG S+GFGF+ F+ +V+KV
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60
Query: 70 DSHVLEGSRLSIQP 83
H L+G RL I P
Sbjct: 61 KEHRLDG-RL-IDP 72
Score = 125 (49.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 26/85 (30%), Positives = 46/85 (54%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L + +++++F E+G+I + D T +GF F+TF+ ++ V KV
Sbjct: 83 VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVL 142
Query: 68 STDSHVLEGSRLSI---QPSDSHNR 89
H + GS+ I QP + + +
Sbjct: 143 EKKFHNVSGSKCEIKVAQPKEVYQQ 167
>CGD|CAL0003460 [details] [associations]
symbol:orf19.5989 species:5476 "Candida albicans" [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0005849 "mRNA
cleavage factor complex" evidence=IEA] [GO:0006379 "mRNA cleavage"
evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
CGD:CAL0003460 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AACQ01000003 EMBL:AACQ01000004 eggNOG:COG0724 KO:K14411
RefSeq:XP_723052.1 RefSeq:XP_723199.1 ProteinModelPortal:Q5ANB5
SMR:Q5ANB5 STRING:Q5ANB5 GeneID:3635162 GeneID:3635323
KEGG:cal:CaO19.13410 KEGG:cal:CaO19.5989 Uniprot:Q5ANB5
Length = 475
Score = 172 (65.6 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 37/101 (36%), Positives = 59/101 (58%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
++ KIFVG + V+ E FFS++G+I++ +M DK+TG S+GFGFVT+ + AVDKV
Sbjct: 244 KVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKV 303
Query: 67 FSTDSHVLEGSRLSIQ---PSDSHNR---MAENMEDRFNQA 101
L+G + ++ P HN+ M + + + QA
Sbjct: 304 CVNKYLTLKGKAMEVKRAAPRGQHNQQVMMQQQQQQQQQQA 344
Score = 152 (58.6 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 28/67 (41%), Positives = 43/67 (64%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K F+G L W + L F +YG I++ ++M D TG S+GFGF+TF++ ++VD +
Sbjct: 163 KCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALLK- 221
Query: 70 DSHVLEG 76
D HVL+G
Sbjct: 222 DRHVLDG 228
>UNIPROTKB|F1NF81 [details] [associations]
symbol:DBI "Acyl-CoA-binding protein" species:9031 "Gallus
gallus" [GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
GeneTree:ENSGT00680000099745 InterPro:IPR022408 SUPFAM:SSF47027
PROSITE:PS00880 EMBL:AADN02016908 IPI:IPI00822854
Ensembl:ENSGALT00000019785 Uniprot:F1NF81
Length = 86
Score = 150 (57.9 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 98 FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQM 157
F +A + + L + +L Y+ YKQATVG N D+P + + K+K++AWN+L M
Sbjct: 5 FQKAAEEVKQLKSQPTDQEMLDVYSHYKQATVGDVNTDRPGMLDFKGKAKWDAWNALKGM 64
Query: 158 AKSEAMSKYIALLKEV 173
+K +AM Y+A ++E+
Sbjct: 65 SKEDAMKAYVAKVEEL 80
>UNIPROTKB|G3V4X6 [details] [associations]
symbol:SLIRP "SRA stem-loop-interacting RNA-binding
protein, mitochondrial" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005739 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC008044 HGNC:HGNC:20495 ChiTaRS:SLIRP
EMBL:AC008372 ProteinModelPortal:G3V4X6 SMR:G3V4X6
Ensembl:ENST00000557623 ArrayExpress:G3V4X6 Bgee:G3V4X6
Uniprot:G3V4X6
Length = 98
Score = 150 (57.9 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 26/82 (31%), Positives = 50/82 (60%)
Query: 6 RQLNK--IFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAV 63
R +N+ FV +PWT + ++LK+ F+++G + + FDK TG +G G+V F ++E +
Sbjct: 14 RSINQPVAFVRRIPWTAASSQLKEHFAQFGHVRRCILPFDKETGFHRGLGWVQFSSEEGL 73
Query: 64 DKVFSTDSHVLEGSR-LSIQPS 84
++H+++G + L QP+
Sbjct: 74 RNALQQENHIIDGVKCLKSQPT 95
>UNIPROTKB|F1M3H8 [details] [associations]
symbol:F1M3H8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0032496 GO:GO:0006954
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 IPI:IPI00777708
ProteinModelPortal:F1M3H8 PRIDE:F1M3H8 Ensembl:ENSRNOT00000061231
Uniprot:F1M3H8
Length = 194
Score = 150 (57.9 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
++ K+FVG L V+ +L + FS++G + A ++ DK +G +GFGFV FQ+ +A DK
Sbjct: 96 KVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKA 155
Query: 67 FSTDSHVLEGSRLSIQ 82
H ++G R+ ++
Sbjct: 156 AVVKFHPIQGHRVEVK 171
>UNIPROTKB|D6RBZ0 [details] [associations]
symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
ChiTaRS:HNRNPAB IPI:IPI00964992 ProteinModelPortal:D6RBZ0
SMR:D6RBZ0 Ensembl:ENST00000506339 ArrayExpress:D6RBZ0 Bgee:D6RBZ0
Uniprot:D6RBZ0
Length = 327
Score = 168 (64.2 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE 61
S + K+FVG L W S +LK +F+++G++++ ++ D NTG S+GFGF+ F++
Sbjct: 63 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAA 122
Query: 62 AVDKVFSTDSHVLEG 76
+V+KV H L+G
Sbjct: 123 SVEKVLDQKEHRLDG 137
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L + +++++F E+G+I + D +GF F+TF+ +E V KV
Sbjct: 153 VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVL 212
Query: 68 STDSHVLEGSRLSI---QPSDSHNRMAENMEDRFNQ 100
H + GS+ I QP + + + R N+
Sbjct: 213 EKKFHTVSGSKCEIKVAQPKEVYQQQQYGSGGRGNR 248
>TAIR|locus:2032120 [details] [associations]
symbol:AT1G78260 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HSSP:P09651 HOGENOM:HOG000276232 eggNOG:NOG248750 EMBL:AY084982
EMBL:BT030002 IPI:IPI00529893 RefSeq:NP_565175.1 UniGene:At.43623
ProteinModelPortal:Q8LF90 SMR:Q8LF90 STRING:Q8LF90
EnsemblPlants:AT1G78260.1 GeneID:844161 KEGG:ath:AT1G78260
TAIR:At1g78260 InParanoid:Q8LF90 OMA:SPYYYGY PhylomeDB:Q8LF90
ProtClustDB:CLSN2689288 Genevestigator:Q8LF90 Uniprot:Q8LF90
Length = 287
Score = 166 (63.5 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L W +E++++F ++G+I+ A ++ DKNTG SKG+GFVTF+ ++ + +
Sbjct: 18 KVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRESDSATRAVAD 77
Query: 70 DSHVLEGSR 78
+ V++G +
Sbjct: 78 PNPVIDGRK 86
>UNIPROTKB|Q5T8E0 [details] [associations]
symbol:ACBD5 "Acyl-CoA-binding domain-containing protein 5"
species:9606 "Homo sapiens" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS51228 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
HOGENOM:HOG000231479 InterPro:IPR022408 SUPFAM:SSF47027
PROSITE:PS00880 HOVERGEN:HBG106445 EMBL:AL160291 UniGene:Hs.530597
HGNC:HGNC:23338 ChiTaRS:ACBD5 IPI:IPI00643997 SMR:Q5T8E0
Ensembl:ENST00000426079 Uniprot:Q5T8E0
Length = 294
Score = 158 (60.7 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 95 EDRFNQACDYLPSLVK----KLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNA 150
E RF A + SL K + + +LKFY+ YKQAT G C + +P +++ + K++A
Sbjct: 51 ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 110
Query: 151 WNSLGQMAKSEAMSKYIALLKEV 173
W+SLG M K EAM Y+ +K++
Sbjct: 111 WSSLGDMTKEEAMIAYVEEMKKI 133
Score = 45 (20.9 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 23/108 (21%), Positives = 48/108 (44%)
Query: 191 PNQKAMSKYIALLNEVDASWEDKEQEEINWDESQESGSK--ENEGQTKGW-VNVSSMIND 247
PN K ++ + S E++ QEE+ E ++ K + K V V++ +
Sbjct: 191 PNAKTVNGKAESSDSGAESEEEEAQEEVKGAEQSDNDKKMMKKSADHKNLEVIVTNGYDK 250
Query: 248 ESQLDDNEKNIYEWAK-EGKLDMLVKQLTKLKDFNINQLDENGLNCLH 294
+ + D + +I+ + G+ VK + D N+ Q ++ + C+H
Sbjct: 251 DGFVQDIQNDIHASSSLNGRSTEEVKPI----DENLGQTGKSAV-CIH 293
>UNIPROTKB|Q99729 [details] [associations]
symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0003729 "mRNA binding"
evidence=TAS] [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0001837
EMBL:CH471165 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 KO:K13044 InterPro:IPR012956 Pfam:PF08143
EMBL:M65028 EMBL:U76713 EMBL:AK054600 EMBL:AK097657 EMBL:BC001616
EMBL:BC002625 EMBL:BC004561 EMBL:BC009359 EMBL:BC036708
IPI:IPI00106509 IPI:IPI00329355 IPI:IPI00334587 IPI:IPI00334713
PIR:S17563 RefSeq:NP_004490.2 RefSeq:NP_112556.2 UniGene:Hs.591731
UniGene:Hs.715055 PDB:3S7R PDBsum:3S7R ProteinModelPortal:Q99729
SMR:Q99729 IntAct:Q99729 MINT:MINT-4537784 STRING:Q99729
PhosphoSite:Q99729 DMDM:158523286 SWISS-2DPAGE:Q99729 PaxDb:Q99729
PRIDE:Q99729 Ensembl:ENST00000355836 Ensembl:ENST00000358344
Ensembl:ENST00000504898 Ensembl:ENST00000506259 GeneID:3182
KEGG:hsa:3182 UCSC:uc003miu.3 UCSC:uc003miv.3 CTD:3182
GeneCards:GC05P177631 HGNC:HGNC:5034 HPA:HPA046688 MIM:602688
neXtProt:NX_Q99729 PharmGKB:PA162391196 InParanoid:Q99729
OMA:FILFKDP OrthoDB:EOG42BX9K ChiTaRS:HNRNPAB
EvolutionaryTrace:Q99729 GenomeRNAi:3182 NextBio:12628
ArrayExpress:Q99729 Bgee:Q99729 CleanEx:HS_HNRNPAB
Genevestigator:Q99729 GermOnline:ENSG00000197451 Uniprot:Q99729
Length = 332
Score = 168 (64.2 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE 61
S + K+FVG L W S +LK +F+++G++++ ++ D NTG S+GFGF+ F++
Sbjct: 62 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAA 121
Query: 62 AVDKVFSTDSHVLEG 76
+V+KV H L+G
Sbjct: 122 SVEKVLDQKEHRLDG 136
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 8 LNKIFVGNL-PWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
+ KIFVG L P + + +++++F E+G+I + D +GF F+TF+ +E V KV
Sbjct: 152 VKKIFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKV 211
Query: 67 FSTDSHVLEGSRLSI---QPSDSHNRMAENMEDRFNQ 100
H + GS+ I QP + + + R N+
Sbjct: 212 LEKKFHTVSGSKCEIKVAQPKEVYQQQQYGSGGRGNR 248
>TAIR|locus:2037370 [details] [associations]
symbol:AT1G20880 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
IPI:IPI00530203 RefSeq:NP_001185049.1 RefSeq:NP_564127.1
UniGene:At.26164 ProteinModelPortal:F4HUQ5 SMR:F4HUQ5 PRIDE:F4HUQ5
EnsemblPlants:AT1G20880.1 EnsemblPlants:AT1G20880.2 GeneID:838681
KEGG:ath:AT1G20880 OMA:MAYHSIP Uniprot:F4HUQ5
Length = 274
Score = 165 (63.1 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L W L++ F +YG I+ A V+ DKNTG SKG+GFVTF++ EA +
Sbjct: 25 KVFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRACVD 84
Query: 70 DSHVLEGSR 78
+ +++G R
Sbjct: 85 PTPIIDGRR 93
>WB|WBGene00016655 [details] [associations]
symbol:acbp-1 species:6239 "Caenorhabditis elegans"
[GO:0000062 "fatty-acyl-CoA binding" evidence=IEA] [GO:0019915
"lipid storage" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000582 Pfam:PF00887
PRINTS:PR00689 PROSITE:PS51228 Gene3D:1.20.80.10 InterPro:IPR014352
GO:GO:0006810 GO:GO:0000062 eggNOG:COG4281
GeneTree:ENSGT00680000099745 GO:GO:0008289 InterPro:IPR022408
SUPFAM:SSF47027 PROSITE:PS00880 HOGENOM:HOG000261845 EMBL:FO080862
PIR:T30954 RefSeq:NP_491412.1 ProteinModelPortal:O01805 SMR:O01805
STRING:O01805 PaxDb:O01805 EnsemblMetazoa:C44E4.6.1
EnsemblMetazoa:C44E4.6.2 GeneID:172071 KEGG:cel:CELE_C44E4.6
UCSC:C44E4.6.1 CTD:172071 WormBase:C44E4.6 InParanoid:O01805
OMA:GDNTTDK NextBio:873895 GO:GO:0019915 Uniprot:O01805
Length = 86
Score = 149 (57.5 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 29/78 (37%), Positives = 48/78 (61%)
Query: 98 FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQM 157
F+ A + +L + LLK YAL+KQ TVG DKP ++++ K+K++AW+ +
Sbjct: 5 FDDAAATVKTLKTSPSNDELLKLYALFKQGTVGDNTTDKPGMFDLKGKAKWSAWDEKKGL 64
Query: 158 AKSEAMSKYIALLKEVDA 175
AK +A Y+AL++E+ A
Sbjct: 65 AKDDAQKAYVALVEELIA 82
>ZFIN|ZDB-GENE-050306-36 [details] [associations]
symbol:zgc:110796 "zgc:110796" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-050306-36 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 HOVERGEN:HBG107480 KO:K14411
GeneTree:ENSGT00390000002308 EMBL:CABZ01074485 EMBL:BC090772
IPI:IPI00555445 RefSeq:NP_001013351.1 UniGene:Dr.87721 SMR:Q5CZN9
STRING:Q5CZN9 Ensembl:ENSDART00000060532 GeneID:503755
KEGG:dre:503755 eggNOG:NOG285314 InParanoid:Q5CZN9 OMA:MEADGTQ
OrthoDB:EOG4GHZQT NextBio:20866299 Uniprot:Q5CZN9
Length = 94
Score = 149 (57.5 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 27/71 (38%), Positives = 44/71 (61%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + LK++F ++G++ VM D T S+GFGFVT+ ++ VDKV +
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYVDQTGVDKVLAQ 82
Query: 70 DSHVLEGSRLS 80
+ H L+ +S
Sbjct: 83 NRHELDSKTVS 93
>DICTYBASE|DDB_G0279695 [details] [associations]
symbol:DDB_G0279695 "RNA recognition motif-containing
protein RRM" species:44689 "Dictyostelium discoideum" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0279695 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AAFI02000032 eggNOG:COG0724
ProtClustDB:CLSZ2430003 RefSeq:XP_641604.1
ProteinModelPortal:Q54WE9 PRIDE:Q54WE9 EnsemblProtists:DDB0233747
GeneID:8622181 KEGG:ddi:DDB_G0279695 InParanoid:Q54WE9 OMA:HEMDGRQ
Uniprot:Q54WE9
Length = 84
Score = 148 (57.2 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
N+IFV +PW++ LK FS++G + + V+ D+ T SKGFGFVTF N E+ +
Sbjct: 3 NRIFVARIPWSICKIALKTHFSKFGPVSDGYVVLDRITKRSKGFGFVTFDNAESAQNAVN 62
Query: 69 TDSHVLEGSRLSI 81
+ H ++G +L +
Sbjct: 63 S-VHEMDGRQLVV 74
>UNIPROTKB|H0YJ40 [details] [associations]
symbol:SLIRP "SRA stem-loop-interacting RNA-binding
protein, mitochondrial" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005739 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC008044 HGNC:HGNC:20495 ChiTaRS:SLIRP
EMBL:AC008372 Ensembl:ENST00000556831 Uniprot:H0YJ40
Length = 96
Score = 148 (57.2 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 23/78 (29%), Positives = 49/78 (62%)
Query: 6 RQLNK--IFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAV 63
R +N+ FV +PWT + ++LK+ F+++G + + FDK TG +G G+V F ++E +
Sbjct: 12 RSINQPVAFVRRIPWTAASSQLKEHFAQFGHVRRCILPFDKETGFHRGLGWVQFSSEEGL 71
Query: 64 DKVFSTDSHVLEGSRLSI 81
++H+++G ++++
Sbjct: 72 RNALQQENHIIDGVKVNL 89
>UNIPROTKB|Q9GZT3 [details] [associations]
symbol:SLIRP "SRA stem-loop-interacting RNA-binding
protein, mitochondrial" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005739 GO:GO:0005634 GO:GO:0006355 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 HOGENOM:HOG000276232
CTD:81892 eggNOG:NOG291073 HOVERGEN:HBG079935 OMA:SNELREH
OrthoDB:EOG4Z62Q4 EMBL:AY860853 EMBL:AJ272055 EMBL:AF253980
EMBL:AF271779 EMBL:BC017895 IPI:IPI00009922 RefSeq:NP_001254792.1
RefSeq:NP_001254793.1 RefSeq:NP_112487.1 UniGene:Hs.655105
ProteinModelPortal:Q9GZT3 SMR:Q9GZT3 IntAct:Q9GZT3 STRING:Q9GZT3
PhosphoSite:Q9GZT3 DMDM:74762723 PaxDb:Q9GZT3 PeptideAtlas:Q9GZT3
PRIDE:Q9GZT3 DNASU:81892 Ensembl:ENST00000557342 GeneID:81892
KEGG:hsa:81892 UCSC:uc001xue.4 GeneCards:GC14P078175
HGNC:HGNC:20495 HPA:HPA020291 MIM:610211 neXtProt:NX_Q9GZT3
PharmGKB:PA134892132 InParanoid:Q9GZT3 PhylomeDB:Q9GZT3
ChiTaRS:SLIRP GenomeRNAi:81892 NextBio:72246 ArrayExpress:Q9GZT3
Bgee:Q9GZT3 CleanEx:HS_C14orf156 Genevestigator:Q9GZT3
GermOnline:ENSG00000119705 Uniprot:Q9GZT3
Length = 109
Score = 148 (57.2 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 23/78 (29%), Positives = 48/78 (61%)
Query: 6 RQLNK--IFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAV 63
R +N+ FV +PWT + ++LK+ F+++G + + FDK TG +G G+V F ++E +
Sbjct: 14 RSINQPVAFVRRIPWTAASSQLKEHFAQFGHVRRCILPFDKETGFHRGLGWVQFSSEEGL 73
Query: 64 DKVFSTDSHVLEGSRLSI 81
++H+++G ++ +
Sbjct: 74 RNALQQENHIIDGVKVQV 91
>ZFIN|ZDB-GENE-040718-392 [details] [associations]
symbol:zgc:92030 "zgc:92030" species:7955 "Danio
rerio" [GO:0008152 "metabolic process" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000062 "fatty-acyl-CoA
binding" evidence=IEA] InterPro:IPR000582 InterPro:IPR001753
Pfam:PF00378 Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
ZFIN:ZDB-GENE-040718-392 Gene3D:1.20.80.10 InterPro:IPR014352
InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880
GeneTree:ENSGT00670000097595 EMBL:BX897669 EMBL:FP236475
Ensembl:ENSDART00000151966 Uniprot:K7DY20
Length = 392
Score = 168 (64.2 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 35/84 (41%), Positives = 51/84 (60%)
Query: 90 MAENMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYN 149
M ++ED FN+A D L +L K + LK YAL+KQATVG CN KP + K K++
Sbjct: 36 MGASVED-FNKAKDKLNTLKKDPGNEVKLKIYALFKQATVGPCNTPKPGMLDFVNKVKWD 94
Query: 150 AWNSLGQMAKSEAMSKYIALLKEV 173
AW LG +++ EA +Y+ L+ +
Sbjct: 95 AWKGLGSISQEEARQQYVDLISSL 118
>UNIPROTKB|O75521 [details] [associations]
symbol:ECI2 "Enoyl-CoA delta isomerase 2, mitochondrial"
species:9606 "Homo sapiens" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] [GO:0004165 "dodecenoyl-CoA delta-isomerase activity"
evidence=IEA;IDA] [GO:0005782 "peroxisomal matrix"
evidence=IEA;IDA] [GO:0009062 "fatty acid catabolic process"
evidence=IDA] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR000582 InterPro:IPR001753 Pfam:PF00378 Pfam:PF00887
PRINTS:PR00689 PROSITE:PS51228 GO:GO:0005739 Gene3D:1.20.80.10
InterPro:IPR014352 GO:GO:0005782 GO:GO:0000062 eggNOG:COG4281
InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880 GO:GO:0004165
GO:GO:0009062 HOVERGEN:HBG006723 EMBL:AF069301 EMBL:AL136642
EMBL:AK075108 EMBL:AL033383 EMBL:BC002668 EMBL:BC016781
EMBL:BC017474 EMBL:BC033841 EMBL:BC034702 EMBL:AF153612
EMBL:AF244138 IPI:IPI00419263 IPI:IPI00639841 RefSeq:NP_001159482.1
RefSeq:NP_006108.2 RefSeq:NP_996667.2 UniGene:Hs.15250 PDB:2CQU
PDB:2F6Q PDBsum:2CQU PDBsum:2F6Q ProteinModelPortal:O75521
SMR:O75521 IntAct:O75521 STRING:O75521 PhosphoSite:O75521
REPRODUCTION-2DPAGE:IPI00419263 UCD-2DPAGE:O75521 PaxDb:O75521
PRIDE:O75521 DNASU:10455 Ensembl:ENST00000361538
Ensembl:ENST00000380118 Ensembl:ENST00000380125
Ensembl:ENST00000465828 GeneID:10455 KEGG:hsa:10455 UCSC:uc003mwc.3
CTD:10455 GeneCards:GC06M004115 H-InvDB:HIX0025043 HGNC:HGNC:14601
HPA:HPA022130 MIM:608024 neXtProt:NX_O75521 PharmGKB:PA33168
InParanoid:O75521 KO:K13239 OMA:RWLSDEC OrthoDB:EOG49P9ZK
EvolutionaryTrace:O75521 GenomeRNAi:10455 NextBio:39633
ArrayExpress:O75521 Bgee:O75521 Genevestigator:O75521
GermOnline:ENSG00000198721 Uniprot:O75521
Length = 394
Score = 168 (64.2 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 37/104 (35%), Positives = 54/104 (51%)
Query: 88 NRMAENMEDR-FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKS 146
NR A + F + + + L K + LK YALYKQAT G CN+ KP +++ K+
Sbjct: 32 NRTAMRASQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKA 91
Query: 147 KYNAWNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQEEINWDWK 190
K++AWN+LG + K A Y+ L+ + E Q E D K
Sbjct: 92 KWDAWNALGSLPKEAARQNYVDLVSSLSPSLESSSQVEPGTDRK 135
>UNIPROTKB|B4DTC3 [details] [associations]
symbol:HNRNPD "cDNA FLJ54150, highly similar to
Heterogeneous nuclear ribonucleoprotein D0" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0030529 HOGENOM:HOG000234441 HOVERGEN:HBG002295 EMBL:AC124016
UniGene:Hs.480073 HGNC:HGNC:5036 ChiTaRS:HNRNPD InterPro:IPR012956
Pfam:PF08143 EMBL:AK300149 IPI:IPI01014602 SMR:B4DTC3 STRING:B4DTC3
Ensembl:ENST00000543098 Uniprot:B4DTC3
Length = 303
Score = 165 (63.1 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + +LK +FS++G++++ ++ D TG S+GFGFV F+ E+VDKV
Sbjct: 46 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 105
Query: 70 DSHVLEG 76
H L G
Sbjct: 106 KEHKLNG 112
>UNIPROTKB|A5D9H5 [details] [associations]
symbol:HNRPD "Heterogeneous nuclear ribonucleoprotein D"
species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
GeneTree:ENSGT00700000104347 KO:K13044 CTD:3184 InterPro:IPR012956
Pfam:PF08143 EMBL:DAAA02018245 EMBL:BT030594 IPI:IPI00905408
RefSeq:NP_001091533.1 UniGene:Bt.52882 SMR:A5D9H5 STRING:A5D9H5
Ensembl:ENSBTAT00000056365 GeneID:527471 KEGG:bta:527471
NextBio:20874604 Uniprot:A5D9H5
Length = 306
Score = 165 (63.1 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + +LK +FS++G++++ ++ D TG S+GFGFV F+ E+VDKV
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 70 DSHVLEG 76
H L G
Sbjct: 158 KEHKLNG 164
>UNIPROTKB|G3V2S9 [details] [associations]
symbol:SLIRP "SRA stem-loop-interacting RNA-binding
protein, mitochondrial" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005739 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC008044 HGNC:HGNC:20495 ChiTaRS:SLIRP
EMBL:AC008372 ProteinModelPortal:G3V2S9 SMR:G3V2S9
Ensembl:ENST00000557431 ArrayExpress:G3V2S9 Bgee:G3V2S9
Uniprot:G3V2S9
Length = 124
Score = 147 (56.8 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 24/78 (30%), Positives = 48/78 (61%)
Query: 6 RQLNK--IFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAV 63
R +N+ FV +PWT + ++LK+ F+++G + + FDK TG +G G+V F ++E +
Sbjct: 14 RSINQPVAFVRRIPWTAASSQLKEHFAQFGHVRRCILPFDKETGFHRGLGWVQFSSEEGL 73
Query: 64 DKVFSTDSHVLEGSRLSI 81
++H+++G + S+
Sbjct: 74 RNALQQENHIIDGVKESL 91
>UNIPROTKB|F1RHJ8 [details] [associations]
symbol:LOC100523863 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
GeneTree:ENSGT00680000099745 SUPFAM:SSF47027 OMA:QATQGDC
EMBL:CU928997 RefSeq:XP_003131864.1 Ensembl:ENSSSCT00000019381
GeneID:100523863 KEGG:ssc:100523863 Uniprot:F1RHJ8
Length = 87
Score = 147 (56.8 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 98 FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQM 157
F AC + L + L Y+ YKQAT G CNI PS +++AK+K+ AWN M
Sbjct: 6 FEMACAAIKQLKGPVSDKEKLLVYSFYKQATQGDCNIPAPSATDVKAKAKWEAWNGNKGM 65
Query: 158 AKSEAMSKYIALLKEV 173
+K +AM Y+A ++E+
Sbjct: 66 SKMDAMRLYVAKVEEL 81
>TAIR|locus:2119495 [details] [associations]
symbol:GR-RBP2 "AT4G13850" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0009409 "response to cold"
evidence=IGI;IEP;IMP] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0005524 "ATP binding" evidence=IDA] [GO:0001072
"RNA binding transcription antitermination factor activity"
evidence=IDA] [GO:0006970 "response to osmotic stress"
evidence=IMP] [GO:0009631 "cold acclimation" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IMP] [GO:0009845
"seed germination" evidence=IMP] [GO:0031564 "transcription
antitermination" evidence=IDA] [GO:0005507 "copper ion binding"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0006364 "rRNA processing" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005739 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0005507 GO:GO:0003723
GO:GO:0006970 GO:GO:0009845 GO:GO:0003690 GO:GO:0003697
eggNOG:COG0724 EMBL:AL035528 EMBL:AL161537 HOGENOM:HOG000276232
EMBL:AJ002892 EMBL:AY072361 EMBL:BT002197 EMBL:AY085621 EMBL:X69377
EMBL:Z18189 IPI:IPI00527583 PIR:S31443 PIR:T05254
RefSeq:NP_193121.1 UniGene:At.15585 UniGene:At.2
ProteinModelPortal:Q9SVM8 SMR:Q9SVM8 IntAct:Q9SVM8 STRING:Q9SVM8
PaxDb:Q9SVM8 PRIDE:Q9SVM8 ProMEX:Q9SVM8 EnsemblPlants:AT4G13850.1
GeneID:827019 KEGG:ath:AT4G13850 GeneFarm:3949 TAIR:At4g13850
InParanoid:Q9SVM8 OMA:ISEMDGK PhylomeDB:Q9SVM8 ProtClustDB:PLN03134
Genevestigator:Q9SVM8 Uniprot:Q9SVM8
Length = 158
Score = 147 (56.8 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 29/87 (33%), Positives = 49/87 (56%)
Query: 1 MSNSIRQLN-KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN 59
M S+R ++ K+F+G L W L+ F+ +G +++A V+ D+ TG S+GFGFV F +
Sbjct: 26 MLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFND 85
Query: 60 KEAVDKVFST-DSHVLEGSRLSIQPSD 85
+ A S D L G + + P++
Sbjct: 86 EGAATAAISEMDGKELNGRHIRVNPAN 112
>ZFIN|ZDB-GENE-050913-108 [details] [associations]
symbol:acbd7 "acyl-Coenzyme A binding domain
containing 7" species:7955 "Danio rerio" [GO:0000062
"fatty-acyl-CoA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS51228 ZFIN:ZDB-GENE-050913-108 Gene3D:1.20.80.10
InterPro:IPR014352 GO:GO:0000062 eggNOG:COG4281
GeneTree:ENSGT00680000099745 SUPFAM:SSF47027 CTD:414149
HOGENOM:HOG000261845 HOVERGEN:HBG000398 OrthoDB:EOG4GF3GS
OMA:INIACPG EMBL:BX322614 EMBL:BC097225 IPI:IPI00851874
RefSeq:NP_001122240.1 UniGene:Dr.159675 SMR:Q4V8S5
Ensembl:ENSDART00000046209 GeneID:619256 KEGG:dre:619256
InParanoid:Q4V8S5 NextBio:20901473 Uniprot:Q4V8S5
Length = 88
Score = 147 (56.8 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 94 MEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNS 153
++ F+Q + + + + LL Y LYKQA VG NIDKP +++ K+K++AW+S
Sbjct: 3 LKAEFDQYAEDVKKVKTRPTDQELLDLYGLYKQAVVGDINIDKPGMIDLKGKAKWDAWDS 62
Query: 154 LGQMAKSEAMSKYIALLKE 172
M+ +AM YI L K+
Sbjct: 63 RKGMSTEDAMKAYITLAKQ 81
>ZFIN|ZDB-GENE-050522-268 [details] [associations]
symbol:acbd5a "acyl-Coenzyme A binding domain
containing 5a" species:7955 "Danio rerio" [GO:0000062
"fatty-acyl-CoA binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008289 "lipid binding"
evidence=IEA] InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS51228 ZFIN:ZDB-GENE-050522-268 Gene3D:1.20.80.10
InterPro:IPR014352 GO:GO:0000062 GeneTree:ENSGT00680000099745
InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880
InterPro:IPR016347 PIRSF:PIRSF002412 EMBL:CR385039 EMBL:CT573382
IPI:IPI00998964 Ensembl:ENSDART00000135124 Bgee:E9QCH6
Uniprot:E9QCH6
Length = 503
Score = 169 (64.5 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 35/81 (43%), Positives = 51/81 (62%)
Query: 95 EDRFNQACDYLPSLVK----KLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNA 150
E RFN A + +L + +LKFY+ YKQAT G CNI +P +++ K+K++A
Sbjct: 11 EQRFNAAVKVIQNLPSNGSFQPSHDMMLKFYSYYKQATQGPCNIPRPGFWDPVGKAKWDA 70
Query: 151 WNSLGQMAKSEAMSKYIALLK 171
W+SLG+M K EAM+ Y+ LK
Sbjct: 71 WSSLGEMPKEEAMAAYVDDLK 91
>UNIPROTKB|F1SHL4 [details] [associations]
symbol:F1SHL4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104347 InterPro:IPR012956 Pfam:PF08143
EMBL:CU468866 Ensembl:ENSSSCT00000002164 OMA:QYGTIVE Uniprot:F1SHL4
Length = 280
Score = 163 (62.4 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 26/76 (34%), Positives = 50/76 (65%)
Query: 1 MSNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNK 60
+S ++ + K+FVG+L W+ +LK +F+++G++++ ++ D NTG S+GFGFV ++
Sbjct: 64 VSKNVEEEGKMFVGDLSWSNRKKDLKNYFTKFGEVIDCTIKMDPNTGRSRGFGFVLIKDA 123
Query: 61 EAVDKVFSTDSHVLEG 76
+V+K+ H L G
Sbjct: 124 ASVEKILDQKEHRLNG 139
>TAIR|locus:2079276 [details] [associations]
symbol:ATRZ-1A species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA;IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009409 "response to cold" evidence=IMP] [GO:0009631 "cold
acclimation" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR000504 InterPro:IPR001878
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00098 PROSITE:PS50102
PROSITE:PS50158 SMART:SM00343 SMART:SM00360 GO:GO:0005829
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0009631
GO:GO:0003676 Gene3D:4.10.60.10 EMBL:AP001298 HOGENOM:HOG000276232
UniGene:At.48707 HSSP:Q61474 KO:K12885 EMBL:AY054613 EMBL:AF424613
EMBL:AY072457 EMBL:AK221725 EMBL:AK227088 IPI:IPI00530350
RefSeq:NP_189273.1 ProteinModelPortal:Q9LIN3 SMR:Q9LIN3
IntAct:Q9LIN3 STRING:Q9LIN3 PRIDE:Q9LIN3 EnsemblPlants:AT3G26420.1
GeneID:822246 KEGG:ath:AT3G26420 TAIR:At3g26420 InParanoid:Q9LIN3
OMA:SSKDDRY PhylomeDB:Q9LIN3 ProtClustDB:CLSN2723027
Genevestigator:Q9LIN3 Uniprot:Q9LIN3
Length = 245
Score = 160 (61.4 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 32/91 (35%), Positives = 54/91 (59%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
+ F+G L WT S L+ F +YG ++ A V+ DK +G S+GFGF+TF K+A+D+ +
Sbjct: 8 RCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 70 DSHV-LEGSRLSIQPSDSHNRMA--ENMEDR 97
+ + L+G +++ + H A +N DR
Sbjct: 68 MNGMDLDGRTITVDKAQPHQGGAGRDNDGDR 98
>UNIPROTKB|E1BAK6 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 OMA:HNLDGRN GeneTree:ENSGT00700000104255
EMBL:DAAA02020260 IPI:IPI00701555 Ensembl:ENSBTAT00000026274
Uniprot:E1BAK6
Length = 396
Score = 167 (63.8 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L W+ + L+ +FS+YG++++ +M DK T S+GFGFV F++ V V ++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 70 DSHVLEGSRLSIQP 83
H L+G + +P
Sbjct: 61 RPHTLDGRNIDPKP 74
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 25/84 (29%), Positives = 51/84 (60%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
NKIFVG +P EL+++F ++G + +++D +GFGF+TF+++++VD+ +
Sbjct: 103 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 162
Query: 69 TDSHVLEGSRLSI---QPSDSHNR 89
H + G ++ + +P DS ++
Sbjct: 163 MHFHDIMGKKVEVKRAEPRDSKSQ 186
>UNIPROTKB|F1NTG9 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 OMA:HNLDGRN
GeneTree:ENSGT00700000104255 EMBL:AADN02058490 IPI:IPI00577519
Ensembl:ENSGALT00000024525 ArrayExpress:F1NTG9 Uniprot:F1NTG9
Length = 398
Score = 167 (63.8 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L W+ + L+ +FS+YG++++ +M DK T S+GFGFV F++ V V ++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 70 DSHVLEGSRLSIQP 83
H L+G + +P
Sbjct: 61 RPHTLDGRNIDPKP 74
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 25/84 (29%), Positives = 51/84 (60%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
NKIFVG +P EL+++F ++G + +++D +GFGF+TF+++++VD+ +
Sbjct: 103 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 162
Query: 69 TDSHVLEGSRLSI---QPSDSHNR 89
H + G ++ + +P DS ++
Sbjct: 163 MHFHDIMGKKVEVKRAEPRDSKSQ 186
>TAIR|locus:2173967 [details] [associations]
symbol:AT5G55550 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002688 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K14411 HSSP:Q61474 ProtClustDB:CLSN2689626 EMBL:AY050796
EMBL:AY096460 IPI:IPI00543007 RefSeq:NP_568826.1 RefSeq:NP_974937.1
UniGene:At.6910 ProteinModelPortal:Q949Z3 SMR:Q949Z3 PRIDE:Q949Z3
EnsemblPlants:AT5G55550.2 EnsemblPlants:AT5G55550.3 GeneID:835649
KEGG:ath:AT5G55550 TAIR:At5g55550 InParanoid:Q949Z3 OMA:VSERVIM
PhylomeDB:Q949Z3 Genevestigator:Q949Z3 Uniprot:Q949Z3
Length = 460
Score = 168 (64.2 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
KIFVG LP +++ E K +F ++G I + VM+D NT +GFGF+TF + +AVD+V
Sbjct: 111 KIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHK 170
Query: 70 DSHVLEGSRLSIQ 82
H L G + ++
Sbjct: 171 TFHELNGKLVEVK 183
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
L K+F+G + W L+ +FS YG ++ A +M D+ TG ++GFGF+ F + ++V
Sbjct: 5 LGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVI 64
Query: 68 STDSHVLEG 76
D H+++G
Sbjct: 65 M-DKHIIDG 72
>UNIPROTKB|F1MWY9 [details] [associations]
symbol:ECI2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009062 "fatty acid catabolic process" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
InterPro:IPR000582 InterPro:IPR001753 Pfam:PF00378 Pfam:PF00887
PRINTS:PR00689 PROSITE:PS51228 GO:GO:0005739 GO:GO:0003824
Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880 GO:GO:0009062
GeneTree:ENSGT00670000097595 OMA:RWLSDEC EMBL:DAAA02055879
IPI:IPI00842951 Ensembl:ENSBTAT00000020196 ArrayExpress:F1MWY9
Uniprot:F1MWY9
Length = 374
Score = 166 (63.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 35/94 (37%), Positives = 51/94 (54%)
Query: 90 MAENMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYN 149
M + +D FN A + L + + LK YALYKQAT G CN+ KP + K+K++
Sbjct: 16 MLASQKD-FNNAVSQVKLLKEDPGNEVKLKLYALYKQATEGPCNVPKPGMLDFINKTKWD 74
Query: 150 AWNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQE 183
AWN+LG ++K A Y+ L+ + A E E
Sbjct: 75 AWNALGSLSKEAARQNYVDLVSRLSASSESPSPE 108
>FB|FBgn0035742 [details] [associations]
symbol:CG8629 species:7227 "Drosophila melanogaster"
[GO:0050809 "diazepam binding" evidence=ISS] [GO:0000062
"fatty-acyl-CoA binding" evidence=ISS] [GO:0004857 "enzyme
inhibitor activity" evidence=ISS] [GO:0042049 "cellular acyl-CoA
homeostasis" evidence=ISS] InterPro:IPR000582 Pfam:PF00887
PRINTS:PR00689 PROSITE:PS51228 EMBL:AE014296 Gene3D:1.20.80.10
InterPro:IPR014352 GO:GO:0000062 eggNOG:COG4281
GeneTree:ENSGT00680000099745 SUPFAM:SSF47027 HSSP:P07107
EMBL:AY071308 RefSeq:NP_648081.1 UniGene:Dm.5998 SMR:Q9VS20
EnsemblMetazoa:FBtr0076925 GeneID:38781 KEGG:dme:Dmel_CG8629
UCSC:CG8629-RA FlyBase:FBgn0035742 InParanoid:Q9VS20 OMA:LKKKAMY
OrthoDB:EOG46WWS3 GenomeRNAi:38781 NextBio:810346 Uniprot:Q9VS20
Length = 84
Score = 146 (56.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 98 FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQM 157
F +A + + KK S L+FY L+KQATVG NIDKP +++ K+ Y AWN+ +
Sbjct: 4 FEEAAELAKNFSKKPTDSEFLEFYGLFKQATVGDVNIDKPGILDLKKKAMYEAWNAHKGL 63
Query: 158 AKSEAMSKYIALLKE 172
+K A Y+ + ++
Sbjct: 64 SKDAAKEAYVKVYEK 78
>UNIPROTKB|Q3AF33 [details] [associations]
symbol:CHY_0389 "RNA-binding protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 EMBL:CP000141 GenomeReviews:CP000141_GR
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOGENOM:HOG000276232 OMA:KRVHIPT RefSeq:YP_359251.1
ProteinModelPortal:Q3AF33 STRING:Q3AF33 GeneID:3728526
KEGG:chy:CHY_0389 PATRIC:21273941
BioCyc:CHYD246194:GJCN-390-MONOMER Uniprot:Q3AF33
Length = 83
Score = 146 (56.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 24/78 (30%), Positives = 50/78 (64%)
Query: 11 IFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFSTD 70
++VGNLPW + +L++ SE+G+++ A V+ +K+TG S+G+GF+ ++++A + +
Sbjct: 5 LYVGNLPWKIRSEQLQEIASEFGEVIGARVILEKSTGRSRGYGFIEVRDEDAEKFMTGLN 64
Query: 71 SHVLEGSRLSIQPSDSHN 88
+EG +L + + N
Sbjct: 65 GKEVEGRQLVVSEARERN 82
>TIGR_CMR|CHY_0389 [details] [associations]
symbol:CHY_0389 "RNA-binding protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 EMBL:CP000141
GenomeReviews:CP000141_GR Gene3D:3.30.70.330 GO:GO:0003676
eggNOG:COG0724 HOGENOM:HOG000276232 OMA:KRVHIPT RefSeq:YP_359251.1
ProteinModelPortal:Q3AF33 STRING:Q3AF33 GeneID:3728526
KEGG:chy:CHY_0389 PATRIC:21273941
BioCyc:CHYD246194:GJCN-390-MONOMER Uniprot:Q3AF33
Length = 83
Score = 146 (56.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 24/78 (30%), Positives = 50/78 (64%)
Query: 11 IFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFSTD 70
++VGNLPW + +L++ SE+G+++ A V+ +K+TG S+G+GF+ ++++A + +
Sbjct: 5 LYVGNLPWKIRSEQLQEIASEFGEVIGARVILEKSTGRSRGYGFIEVRDEDAEKFMTGLN 64
Query: 71 SHVLEGSRLSIQPSDSHN 88
+EG +L + + N
Sbjct: 65 GKEVEGRQLVVSEARERN 82
>TAIR|locus:2164042 [details] [associations]
symbol:AT5G53680 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=RCA] [GO:0006457 "protein folding"
evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724 EMBL:AB017066
HSSP:Q61474 IPI:IPI00517619 RefSeq:NP_200179.1 UniGene:At.55530
ProteinModelPortal:Q9FI08 SMR:Q9FI08 EnsemblPlants:AT5G53680.1
GeneID:835449 KEGG:ath:AT5G53680 TAIR:At5g53680
HOGENOM:HOG000152479 InParanoid:Q9FI08 PhylomeDB:Q9FI08
ProtClustDB:CLSN2916322 Genevestigator:Q9FI08 Uniprot:Q9FI08
Length = 169
Score = 146 (56.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
KI+VG LPWT L FF +G+I++ +V+ D+ T S+G+GFVTF++ E+ +
Sbjct: 14 KIYVGGLPWTTRKEGLINFFKRFGEIIHVNVVCDRETDRSQGYGFVTFKDAESATRACKD 73
Query: 70 DSHVLEG 76
+ +EG
Sbjct: 74 PNPTIEG 80
>UNIPROTKB|Q9XSY6 [details] [associations]
symbol:Q9XSY6 "HnRNP A/B related protein" species:9685
"Felis catus" [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0001837 HOVERGEN:HBG002295 HSSP:Q14103 InterPro:IPR012956
Pfam:PF08143 EMBL:AF153444 ProteinModelPortal:Q9XSY6 Uniprot:Q9XSY6
Length = 279
Score = 162 (62.1 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 28/75 (37%), Positives = 47/75 (62%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE 61
S + K+FVG L W S +LK +F+++G++++ ++ NTG SKGFGF+ F++
Sbjct: 57 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMVPNTGRSKGFGFILFKDAA 116
Query: 62 AVDKVFSTDSHVLEG 76
+V+KV H L+G
Sbjct: 117 SVEKVLDQKEHRLDG 131
Score = 134 (52.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L + +++++F E+G+I + D T +GF F+TF+ +E V KV
Sbjct: 147 VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKVL 206
Query: 68 STDSHVLEGSRLSI---QPSDSHNRMAENMEDRFNQ 100
H + GS+ I QP + + + R N+
Sbjct: 207 EKKFHTISGSKCEIKVAQPKEVYQQQQYGSGGRGNR 242
>UNIPROTKB|A6H6Y0 [details] [associations]
symbol:HNRNPD "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0042162 "telomeric DNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0030529 GO:GO:0043488 GO:GO:0042162 HOGENOM:HOG000234441
HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 OrthoDB:EOG49W2FZ
OMA:PNQNWNQ InterPro:IPR012956 Pfam:PF08143 EMBL:DAAA02018245
UniGene:Bt.52882 EMBL:BC146038 IPI:IPI00696935 SMR:A6H6Y0
STRING:A6H6Y0 Ensembl:ENSBTAT00000018540 InParanoid:A6H6Y0
Uniprot:A6H6Y0
Length = 355
Score = 165 (63.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + +LK +FS++G++++ ++ D TG S+GFGFV F+ E+VDKV
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 70 DSHVLEG 76
H L G
Sbjct: 158 KEHKLNG 164
>UNIPROTKB|E2RIX2 [details] [associations]
symbol:HNRNPD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043488 "regulation of mRNA stability"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0043488 GO:GO:0042162
GeneTree:ENSGT00700000104347 KO:K13044 CTD:3184 OMA:PNQNWNQ
InterPro:IPR012956 Pfam:PF08143 EMBL:AAEX03016719
RefSeq:XP_857957.1 Ensembl:ENSCAFT00000038801 GeneID:478450
KEGG:cfa:478450 Uniprot:E2RIX2
Length = 355
Score = 165 (63.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + +LK +FS++G++++ ++ D TG S+GFGFV F+ E+VDKV
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 70 DSHVLEG 76
H L G
Sbjct: 158 KEHKLNG 164
>UNIPROTKB|Q14103 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043488 "regulation of mRNA stability"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA;NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0042162 "telomeric DNA binding" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0006396
"RNA processing" evidence=TAS] [GO:0006401 "RNA catabolic process"
evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AF026126
GO:GO:0005829 GO:GO:0045893 GO:GO:0005654 GO:GO:0000166
Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
GO:GO:0006401 GO:GO:0048255 GO:GO:0030529 EMBL:CH471057
GO:GO:0000398 GO:GO:0042162 eggNOG:COG0724 HOVERGEN:HBG002295
KO:K13044 EMBL:AC124016 OrthoDB:EOG49W2FZ EMBL:D55671 EMBL:D55672
EMBL:D55673 EMBL:D55674 EMBL:AK292707 EMBL:BC002401 EMBL:BC023977
EMBL:BC026015 EMBL:X03910 EMBL:AF039575 EMBL:M94630 IPI:IPI00028888
IPI:IPI00220683 IPI:IPI00220684 IPI:IPI00220685 PIR:A24016
PIR:A44192 PIR:B48138 RefSeq:NP_001003810.1 RefSeq:NP_002129.2
RefSeq:NP_112737.1 RefSeq:NP_112738.1 UniGene:Hs.480073 PDB:1HD0
PDB:1HD1 PDB:1IQT PDB:1WTB PDB:1X0F PDB:2Z5N PDBsum:1HD0
PDBsum:1HD1 PDBsum:1IQT PDBsum:1WTB PDBsum:1X0F PDBsum:2Z5N
ProteinModelPortal:Q14103 SMR:Q14103 IntAct:Q14103
MINT:MINT-5001251 STRING:Q14103 PhosphoSite:Q14103 DMDM:13124489
SWISS-2DPAGE:Q14103 PaxDb:Q14103 PRIDE:Q14103 DNASU:3184
Ensembl:ENST00000313899 Ensembl:ENST00000352301
Ensembl:ENST00000353341 GeneID:3184 KEGG:hsa:3184 UCSC:uc003hmm.1
UCSC:uc003hmn.1 UCSC:uc003hmo.1 UCSC:uc003hmp.1 CTD:3184
GeneCards:GC04M083274 HGNC:HGNC:5036 HPA:HPA004911 MIM:601324
neXtProt:NX_Q14103 PharmGKB:PA29361 InParanoid:Q14103 OMA:PNQNWNQ
PhylomeDB:Q14103 ChiTaRS:HNRNPD EvolutionaryTrace:Q14103
GenomeRNAi:3184 NextBio:12644 PMAP-CutDB:Q14103 ArrayExpress:Q14103
Bgee:Q14103 Genevestigator:Q14103 GermOnline:ENSG00000138668
InterPro:IPR012956 Pfam:PF08143 Uniprot:Q14103
Length = 355
Score = 165 (63.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + +LK +FS++G++++ ++ D TG S+GFGFV F+ E+VDKV
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 70 DSHVLEG 76
H L G
Sbjct: 158 KEHKLNG 164
>MGI|MGI:101947 [details] [associations]
symbol:Hnrnpd "heterogeneous nuclear ribonucleoprotein D"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005829 "cytosol" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=ISO] [GO:0042162
"telomeric DNA binding" evidence=ISO] [GO:0043488 "regulation of
mRNA stability" evidence=IMP] [GO:0048255 "mRNA stabilization"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:101947 GO:GO:0005829
GO:GO:0005634 GO:GO:0006355 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0003723 GO:GO:0048255 GO:GO:0030529
GO:GO:0043488 GO:GO:0042162 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 KO:K13044
OrthoDB:EOG49W2FZ CTD:3184 OMA:PNQNWNQ ChiTaRS:HNRNPD
InterPro:IPR012956 Pfam:PF08143 EMBL:U11273 EMBL:U11274
EMBL:BC011172 EMBL:BC049098 IPI:IPI00230086 IPI:IPI00330958
IPI:IPI00336873 IPI:IPI00336874 PIR:I49069 PIR:I49070
RefSeq:NP_001070733.1 RefSeq:NP_001070734.1 RefSeq:NP_001070735.1
RefSeq:NP_031542.2 UniGene:Mm.150231 ProteinModelPortal:Q60668
SMR:Q60668 DIP:DIP-31411N IntAct:Q60668 STRING:Q60668
PhosphoSite:Q60668 PaxDb:Q60668 PRIDE:Q60668
Ensembl:ENSMUST00000019128 Ensembl:ENSMUST00000172361 GeneID:11991
KEGG:mmu:11991 UCSC:uc008ygt.1 UCSC:uc008ygu.1 InParanoid:Q60668
NextBio:280159 Bgee:Q60668 Genevestigator:Q60668
GermOnline:ENSMUSG00000000568 Uniprot:Q60668
Length = 355
Score = 165 (63.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + +LK +FS++G++++ ++ D TG S+GFGFV F+ E+VDKV
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 70 DSHVLEG 76
H L G
Sbjct: 158 KEHKLNG 164
>UNIPROTKB|G3V6A4 [details] [associations]
symbol:Hnrpd "Protein Hnrpd" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:620365 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0030529 GeneTree:ENSGT00700000104347 KO:K13044
InterPro:IPR012956 Pfam:PF08143 RefSeq:NP_001076009.1
UniGene:Rn.94022 GeneID:79256 KEGG:rno:79256 CTD:79256
NextBio:614748 EMBL:CH474022 Ensembl:ENSRNOT00000003158
Uniprot:G3V6A4
Length = 304
Score = 163 (62.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 28/67 (41%), Positives = 43/67 (64%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + +LK +FS++G +++ ++ D TG S+GFGFV F+ E+VDKV
Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155
Query: 70 DSHVLEG 76
H L G
Sbjct: 156 KEHKLNG 162
>UNIPROTKB|Q5ZIH1 [details] [associations]
symbol:HNRNPD "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042162 "telomeric DNA binding"
evidence=IEA] [GO:0043488 "regulation of mRNA stability"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0043488 GO:GO:0042162
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
UniGene:Gga.4605 GeneTree:ENSGT00700000104347 KO:K13044
OrthoDB:EOG49W2FZ CTD:3184 OMA:PNQNWNQ EMBL:AADN02009040
EMBL:AJ720813 IPI:IPI00597667 RefSeq:NP_001026314.1 SMR:Q5ZIH1
STRING:Q5ZIH1 Ensembl:ENSGALT00000018234 GeneID:422602
KEGG:gga:422602 InParanoid:Q5ZIH1 NextBio:20825212 Uniprot:Q5ZIH1
Length = 257
Score = 160 (61.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 11 IFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFSTD 70
+F+G L W + +LK +FS++G++++ ++ D TG S+GFGFV F+ E+VDKV
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 71 SHVLEG 76
H L G
Sbjct: 61 EHKLNG 66
Score = 112 (44.5 bits), Expect = 0.00061, P = 0.00061
Identities = 22/88 (25%), Positives = 45/88 (51%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L +++++F +G++ + + D T +GF F+TF+ +E V K+
Sbjct: 83 VKKIFVGGLSPDTPEEKIREYFGAFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 142
Query: 68 STDSHVLEGSRLSIQPSDSHNRMAENME 95
H + S+ I+ + S + + +
Sbjct: 143 EKKYHNVGLSKCEIKVAMSKEQYQQQQQ 170
>TAIR|locus:2049721 [details] [associations]
symbol:AT2G37220 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009409
"response to cold" evidence=IEP;RCA] [GO:0010319 "stromule"
evidence=IDA] [GO:0045087 "innate immune response" evidence=IDA]
[GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0009697 "salicylic acid
biosynthetic process" evidence=RCA] [GO:0009814 "defense response,
incompatible interaction" evidence=RCA] [GO:0019684
"photosynthesis, light reaction" evidence=RCA] [GO:0042742 "defense
response to bacterium" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0009737 GO:GO:0009570 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0008266 GO:GO:0000166 GO:GO:0009409 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0009941 EMBL:AC005896
GO:GO:0030529 GO:GO:0009535 GO:GO:0010319 eggNOG:COG0724
HOGENOM:HOG000276232 EMBL:AC006260 KO:K11294 EMBL:AF370167
EMBL:AY048251 EMBL:AY059129 IPI:IPI00540246 PIR:A84790
RefSeq:NP_181259.1 UniGene:At.25300 ProteinModelPortal:Q9ZUU4
SMR:Q9ZUU4 IntAct:Q9ZUU4 STRING:Q9ZUU4 SWISS-2DPAGE:Q9ZUU4
PaxDb:Q9ZUU4 PRIDE:Q9ZUU4 ProMEX:Q9ZUU4 EnsemblPlants:AT2G37220.1
GeneID:818299 KEGG:ath:AT2G37220 GeneFarm:4058 TAIR:At2g37220
InParanoid:Q9ZUU4 OMA:PFNVDSA PhylomeDB:Q9ZUU4
ProtClustDB:CLSN2684922 Genevestigator:Q9ZUU4 GermOnline:AT2G37220
Uniprot:Q9ZUU4
Length = 289
Score = 162 (62.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF- 67
N+++VGNL W V L+ FSE G+++ A V++D+++G SKGFGFVT+ + + V
Sbjct: 204 NRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIK 263
Query: 68 STDSHVLEGSRLSIQPSDS 86
S D L+G ++ + +++
Sbjct: 264 SLDGADLDGRQIRVSEAEA 282
Score = 128 (50.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVGNLP+ V +L + F G + V++DK TG S+GFGFVT + V+
Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151
Query: 70 -DSHVLEGSRLSI 81
+ + L+G L +
Sbjct: 152 FNGYELDGRPLRV 164
>TAIR|locus:2168848 [details] [associations]
symbol:AT5G40490 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 EMBL:AB009052 HOGENOM:HOG000234441
HSSP:Q61474 KO:K12741 eggNOG:NOG289504 EMBL:AY136466
IPI:IPI00518075 RefSeq:NP_198865.1 UniGene:At.30284
ProteinModelPortal:Q9FM47 SMR:Q9FM47 PaxDb:Q9FM47 PRIDE:Q9FM47
EnsemblPlants:AT5G40490.1 GeneID:834047 KEGG:ath:AT5G40490
TAIR:At5g40490 InParanoid:Q9FM47 OMA:YESEDMV PhylomeDB:Q9FM47
ProtClustDB:CLSN2916909 ArrayExpress:Q9FM47 Genevestigator:Q9FM47
Uniprot:Q9FM47
Length = 423
Score = 166 (63.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 30/86 (34%), Positives = 59/86 (68%)
Query: 1 MSNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNK 60
MS++ + KIFVG +P +V +E K+FF ++G++ +M D +TG S+GFGFVT++++
Sbjct: 122 MSSNDFKTKKIFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESE 181
Query: 61 EAVDKVFSTDSHV-LEGSRLSIQPSD 85
+ VD + + + + L G+++ I+ ++
Sbjct: 182 DMVDHLLAKGNRIELSGTQVEIKKAE 207
Score = 159 (61.0 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 32/84 (38%), Positives = 50/84 (59%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
KIFVG L + E K F +YG+I ++ +M D+ TG +GFGFVT+ + VDKV
Sbjct: 43 KIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQ- 101
Query: 70 DSHVLEGSRLSIQPSDSHNRMAEN 93
D+H++ G ++ I+ + M+ N
Sbjct: 102 DNHIIIGKQVEIKRTIPRGSMSSN 125
>GENEDB_PFALCIPARUM|PF14_0749 [details] [associations]
symbol:PF14_0749 "acyl CoA binding protein"
species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000582 Pfam:PF00887
PRINTS:PR00689 PROSITE:PS51228 Gene3D:1.20.80.10 InterPro:IPR014352
GO:GO:0000062 SUPFAM:SSF47027 HOGENOM:HOG000261845 EMBL:AE014187
ProtClustDB:PTZ00458 RefSeq:XP_001348923.1 PDB:1HBK PDBsum:1HBK
ProteinModelPortal:Q8IK57 SMR:Q8IK57 EnsemblProtists:PF14_0749:mRNA
GeneID:812331 KEGG:pfa:PF14_0749 EuPathDB:PlasmoDB:PF3D7_1477800
OMA:TIGNCNI EvolutionaryTrace:Q8IK57 Uniprot:Q8IK57
Length = 90
Score = 145 (56.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 27/90 (30%), Positives = 48/90 (53%)
Query: 94 MEDRFNQACDYLPSLVKKLDSSTLLKF--YALYKQATVGQCNIDKPSWYNMEAKSKYNAW 151
M F + ++ L + ++ LK Y YKQ+T+G CNI +PS + + KY AW
Sbjct: 1 MAQVFEECVSFINGLPRTINLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEAW 60
Query: 152 NSLGQMAKSEAMSKYIALLKEVDAGWEDKE 181
S+ + + +A +Y+ ++ E+ W+D E
Sbjct: 61 KSVENLNREDAQKRYVDIVSEIFPYWQDGE 90
>UNIPROTKB|F8VTQ5 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1 IPI:IPI01022641
ProteinModelPortal:F8VTQ5 SMR:F8VTQ5 PRIDE:F8VTQ5
Ensembl:ENST00000551702 ArrayExpress:F8VTQ5 Bgee:F8VTQ5
Uniprot:F8VTQ5
Length = 145
Score = 145 (56.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 27/84 (32%), Positives = 46/84 (54%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG + + L+ +F +YG+I +M D+ +G +GF FVTF + ++VDK+
Sbjct: 55 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 114
Query: 68 STDSHVLEGSRLSIQPSDSHNRMA 91
H + G ++ + S MA
Sbjct: 115 IQKYHTVNGHNCEVRKALSKQEMA 138
>UNIPROTKB|J3KMY7 [details] [associations]
symbol:SLIRP "SRA stem-loop-interacting RNA-binding
protein, mitochondrial" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC008044 CTD:81892
RefSeq:NP_001254792.1 UniGene:Hs.655105 GeneID:81892 KEGG:hsa:81892
HGNC:HGNC:20495 ChiTaRS:SLIRP EMBL:AC008372
ProteinModelPortal:J3KMY7 Ensembl:ENST00000238688 Uniprot:J3KMY7
Length = 107
Score = 145 (56.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 23/76 (30%), Positives = 47/76 (61%)
Query: 6 RQLNK--IFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAV 63
R +N+ FV +PWT + ++LK+ F+++G + + FDK TG +G G+V F ++E +
Sbjct: 14 RSINQPVAFVRRIPWTAASSQLKEHFAQFGHVRRCILPFDKETGFHRGLGWVQFSSEEGL 73
Query: 64 DKVFSTDSHVLEGSRL 79
++H+++G ++
Sbjct: 74 RNALQQENHIIDGVKV 89
>UNIPROTKB|Q8IK57 [details] [associations]
symbol:PF14_0749 "Acyl CoA binding protein" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS51228 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
SUPFAM:SSF47027 HOGENOM:HOG000261845 EMBL:AE014187
ProtClustDB:PTZ00458 RefSeq:XP_001348923.1 PDB:1HBK PDBsum:1HBK
ProteinModelPortal:Q8IK57 SMR:Q8IK57 EnsemblProtists:PF14_0749:mRNA
GeneID:812331 KEGG:pfa:PF14_0749 EuPathDB:PlasmoDB:PF3D7_1477800
OMA:TIGNCNI EvolutionaryTrace:Q8IK57 Uniprot:Q8IK57
Length = 90
Score = 145 (56.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 27/90 (30%), Positives = 48/90 (53%)
Query: 94 MEDRFNQACDYLPSLVKKLDSSTLLKF--YALYKQATVGQCNIDKPSWYNMEAKSKYNAW 151
M F + ++ L + ++ LK Y YKQ+T+G CNI +PS + + KY AW
Sbjct: 1 MAQVFEECVSFINGLPRTINLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEAW 60
Query: 152 NSLGQMAKSEAMSKYIALLKEVDAGWEDKE 181
S+ + + +A +Y+ ++ E+ W+D E
Sbjct: 61 KSVENLNREDAQKRYVDIVSEIFPYWQDGE 90
>TAIR|locus:2076096 [details] [associations]
symbol:GRP4 "glycine-rich RNA-binding protein 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS;IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0006970 "response
to osmotic stress" evidence=IMP] [GO:0009409 "response to cold"
evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009664 "plant-type
cell wall organization" evidence=RCA] [GO:0042545 "cell wall
modification" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
EMBL:CP002686 GO:GO:0000166 GO:GO:0009651 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0003690 GO:GO:0003697 EMBL:AP001297
eggNOG:COG0724 HOGENOM:HOG000276232 HSSP:Q14103
ProtClustDB:PLN03134 EMBL:AY070755 EMBL:AY097374 EMBL:AY085838
IPI:IPI00523873 RefSeq:NP_189025.1 RefSeq:NP_850629.1
UniGene:At.8272 ProteinModelPortal:Q9LIS2 SMR:Q9LIS2 STRING:Q9LIS2
PaxDb:Q8LDS0 PRIDE:Q9LIS2 EnsemblPlants:AT3G23830.1
EnsemblPlants:AT3G23830.2 GeneID:821966 KEGG:ath:AT3G23830
GeneFarm:3951 TAIR:At3g23830 InParanoid:Q9LIS2 OMA:CEDSANN
PhylomeDB:Q9LIS2 Genevestigator:Q9LIS2 Uniprot:Q9LIS2
Length = 136
Score = 145 (56.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 28/83 (33%), Positives = 50/83 (60%)
Query: 1 MSNSIRQLN-KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN 59
M S+R ++ K+FVG L W + LK+ F+ +G++ A+V+ D+ TG S+GFGFV+F
Sbjct: 26 MLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSC 85
Query: 60 KEAVDKVFST-DSHVLEGSRLSI 81
+++ + D L G ++ +
Sbjct: 86 EDSANNAIKEMDGKELNGRQIRV 108
>TAIR|locus:2133862 [details] [associations]
symbol:AT4G26650 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0042732 "D-xylose
metabolic process" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002687 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K14411 HSSP:Q61474 EMBL:AF419605 EMBL:AY097345 IPI:IPI00533249
RefSeq:NP_567753.1 UniGene:At.20416 UniGene:At.67937
ProteinModelPortal:Q8W569 SMR:Q8W569 STRING:Q8W569 PRIDE:Q8W569
EnsemblPlants:AT4G26650.1 GeneID:828772 KEGG:ath:AT4G26650
TAIR:At4g26650 InParanoid:Q8W569 OMA:LVEAVIM PhylomeDB:Q8W569
ProtClustDB:CLSN2689626 Genevestigator:Q8W569 Uniprot:Q8W569
Length = 455
Score = 166 (63.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
KIFVG LP +++ E K +F ++G I + VM+D NT +GFGF+TF ++E+VD V
Sbjct: 123 KIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHK 182
Query: 70 DSHVLEGSRLSIQ 82
H L G + ++
Sbjct: 183 TFHELNGKMVEVK 195
Score = 155 (59.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 24/73 (32%), Positives = 44/73 (60%)
Query: 4 SIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAV 63
S L K+F+G + W L+++F +YG ++ A +M D+ TG ++GFGF+ F +
Sbjct: 10 SASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVA 69
Query: 64 DKVFSTDSHVLEG 76
++V D H+++G
Sbjct: 70 ERVIM-DKHIIDG 81
>TAIR|locus:2129590 [details] [associations]
symbol:AT4G14300 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CP002687 GO:GO:0000166
Gene3D:3.30.70.330 EMBL:Z97335 EMBL:AL161538 GO:GO:0003676
GO:GO:0030529 eggNOG:COG0724 HOGENOM:HOG000234441 KO:K14411
HSSP:Q61474 EMBL:AJ303457 EMBL:AK226323 IPI:IPI00517003 PIR:G71404
RefSeq:NP_193166.2 UniGene:At.33295 ProteinModelPortal:Q8W034
SMR:Q8W034 IntAct:Q8W034 MINT:MINT-1163850 STRING:Q8W034
PaxDb:O23288 PRIDE:Q8W034 EnsemblPlants:AT4G14300.1 GeneID:827071
KEGG:ath:AT4G14300 TAIR:At4g14300 InParanoid:Q8W034 OMA:YGATNIP
PhylomeDB:Q8W034 ProtClustDB:CLSN2913105 Genevestigator:Q8W034
Uniprot:Q8W034
Length = 411
Score = 165 (63.1 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 30/88 (34%), Positives = 55/88 (62%)
Query: 3 NSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEA 62
++ + KIFVG LP T++ E +++F YG + + ++M+D+ T +GFGFV+F +++A
Sbjct: 104 DAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDA 163
Query: 63 VDKVFSTDSHVLEGSRLSIQ---PSDSH 87
VD V H L G ++ ++ P D++
Sbjct: 164 VDSVLHKTFHDLSGKQVEVKRALPKDAN 191
Score = 143 (55.4 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG + W ++L++ F+ YG++ A VM DK TG +GFGFV F + +D+V
Sbjct: 7 KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ- 65
Query: 70 DSHVLEGSRLSIQ 82
+ H ++ + ++
Sbjct: 66 EKHSIDTREVDVK 78
>UNIPROTKB|G3V6A5 [details] [associations]
symbol:Hnrpd "Heterogeneous nuclear ribonucleoprotein D,
isoform CRA_c" species:10116 "Rattus norvegicus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:620365 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
Pfam:PF08143 RefSeq:NP_001076008.1 UniGene:Rn.94022 GeneID:79256
KEGG:rno:79256 CTD:79256 NextBio:614748 EMBL:CH474022
Ensembl:ENSRNOT00000003173 Uniprot:G3V6A5
Length = 334
Score = 163 (62.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 28/67 (41%), Positives = 43/67 (64%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + +LK +FS++G +++ ++ D TG S+GFGFV F+ E+VDKV
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 136
Query: 70 DSHVLEG 76
H L G
Sbjct: 137 KEHKLNG 143
>POMBASE|SPBC660.15 [details] [associations]
symbol:SPBC660.15 "mRNA cleavage factor complex subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISO] [GO:0003730 "mRNA 3'-UTR binding"
evidence=NAS] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005849 "mRNA cleavage factor
complex" evidence=ISO] [GO:0006378 "mRNA polyadenylation"
evidence=ISO] [GO:0006379 "mRNA cleavage" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 PomBase:SPBC660.15 GO:GO:0005737 GO:GO:0000166
EMBL:CU329671 Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730
eggNOG:COG0724 GO:GO:0006379 GO:GO:0005849 KO:K14411 HSSP:Q14103
OrthoDB:EOG4TF3VC PIR:T40627 RefSeq:NP_595094.1
ProteinModelPortal:O94432 SMR:O94432 STRING:O94432
EnsemblFungi:SPBC660.15.1 GeneID:2541150 KEGG:spo:SPBC660.15
OMA:CHKANDG NextBio:20802263 Uniprot:O94432
Length = 474
Score = 166 (63.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 28/71 (39%), Positives = 50/71 (70%)
Query: 6 RQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDK 65
R+ K+F+G L W + + L+ +F ++G++++ +VM D TG S+GFGF+TF+N + V++
Sbjct: 160 REDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNE 219
Query: 66 VFSTDSHVLEG 76
V S + H L+G
Sbjct: 220 VMSKEHH-LDG 229
Score = 163 (62.4 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 31/87 (35%), Positives = 55/87 (63%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG +P + E + FF+++G++++A++M DK+TG +GFGFVT++N+ AV+ S
Sbjct: 248 KMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQ 307
Query: 70 DSHVLEGSRLSIQ---PS----DSHNR 89
+ G + ++ P DSH+R
Sbjct: 308 PYITIHGKPVEVKRATPKASLRDSHDR 334
>UNIPROTKB|Q43472 [details] [associations]
symbol:blt801 "Glycine-rich RNA-binding protein blt801"
species:4513 "Hordeum vulgare" [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0009409 "response to cold" evidence=IDA] [GO:0009737 "response
to abscisic acid stimulus" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0009737 GO:GO:0000166 GO:GO:0009409 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0003697
EMBL:U49482 PIR:S71453 HSSP:P11940 ProteinModelPortal:Q43472
Gramene:Q43472 Genevestigator:Q43472 Uniprot:Q43472
Length = 161
Score = 144 (55.7 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
+ FVG L W L+ FS+YG ++++ ++ D+ TG S+GFGFVTF + EA+ +
Sbjct: 7 RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 70 -DSHVLEGSRLSIQPSDS 86
+ L+G +++ + S
Sbjct: 67 MNGQDLDGRNITVNEAQS 84
>TAIR|locus:2136298 [details] [associations]
symbol:CCR1 "cold, circadian rhythm, and RNA binding 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0005618 "cell wall" evidence=IDA]
[GO:0045087 "innate immune response" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0009651 "response to salt
stress" evidence=IEP] [GO:0005777 "peroxisome" evidence=IDA]
[GO:0010043 "response to zinc ion" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0048046 "apoplast" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0000380 "alternative mRNA splicing, via spliceosome"
evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005886 GO:GO:0009506
GO:GO:0009737 GO:GO:0005794 GO:GO:0005618 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730 GO:GO:0005777
GO:GO:0000166 GO:GO:0010043 GO:GO:0048046 GO:GO:0009651
GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0003723
EMBL:AL161594 eggNOG:COG0724 EMBL:AL050351 GO:GO:0000380
HOGENOM:HOG000276232 UniGene:At.23968 ProtClustDB:CLSN2913158
EMBL:Z14988 EMBL:L00649 EMBL:L04171 EMBL:AY034997 EMBL:AY063005
IPI:IPI00520057 IPI:IPI00526742 PIR:S30148 RefSeq:NP_195637.1
ProteinModelPortal:Q03251 SMR:Q03251 MINT:MINT-1163792
STRING:Q03251 PaxDb:Q03251 PRIDE:Q03251 ProMEX:Q03251
EnsemblPlants:AT4G39260.1 GeneID:830082 KEGG:ath:AT4G39260
TAIR:At4g39260 InParanoid:Q03251 OMA:GNNSGGY Genevestigator:Q03251
Uniprot:Q03251
Length = 169
Score = 144 (55.7 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 24/78 (30%), Positives = 52/78 (66%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAV-DKVFS 68
+ FVG L W + +L++ FS++G ++++ ++ D+ +G S+GFGFVTF++++A+ D +
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 69 TDSHVLEGSRLSIQPSDS 86
+ L+G +++ + S
Sbjct: 67 MNGKELDGRVITVNEAQS 84
>TAIR|locus:2049359 [details] [associations]
symbol:GRP7 "AT2G21660" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0009409 "response
to cold" evidence=IGI;IEP] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0009651 "response to salt stress"
evidence=IEP;RCA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0010501 "RNA secondary structure unwinding"
evidence=IDA] [GO:0032508 "DNA duplex unwinding" evidence=IDA]
[GO:0045087 "innate immune response" evidence=IMP;IDA] [GO:0005777
"peroxisome" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IMP] [GO:0006970 "response to osmotic stress"
evidence=IMP] [GO:0010119 "regulation of stomatal movement"
evidence=IMP] [GO:0009507 "chloroplast" evidence=IDA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA;IMP] [GO:0010043 "response to zinc ion" evidence=IEP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0048046 "apoplast" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006833 "water transport" evidence=RCA]
[GO:0006972 "hyperosmotic response" evidence=RCA] [GO:0007030
"Golgi organization" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=IEP;RCA;TAS] [GO:0009266 "response to temperature
stimulus" evidence=RCA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IMP] [GO:0003729 "mRNA binding" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005829 GO:GO:0009506 GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005777 GO:GO:0010119 GO:GO:0000166 GO:GO:0010043
GO:GO:0048046 GO:GO:0007623 GO:GO:0009651 GO:GO:0009409
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0003690
GO:GO:0003697 GO:GO:0006406 GO:GO:0010228 eggNOG:COG0724
GO:GO:0000380 HOGENOM:HOG000276232 GO:GO:0010501 GO:GO:0032508
EMBL:AC007119 UniGene:At.22672 UniGene:At.23628 EMBL:Z14987
EMBL:L00648 EMBL:L04172 EMBL:AF428381 EMBL:AY054284 EMBL:AY042826
EMBL:AY072523 EMBL:AK318968 EMBL:AY085214 IPI:IPI00523161
IPI:IPI00542675 PIR:S30147 RefSeq:NP_179760.1 UniGene:At.24279
UniGene:At.72988 ProteinModelPortal:Q03250 SMR:Q03250 IntAct:Q03250
MINT:MINT-1163877 STRING:Q03250 PaxDb:Q03250 PRIDE:Q03250
ProMEX:Q03250 EnsemblPlants:AT2G21660.1 GeneID:816705
KEGG:ath:AT2G21660 TAIR:At2g21660 InParanoid:Q03250 OMA:SQHEDGH
ProtClustDB:CLSN2913158 Genevestigator:Q03250 Uniprot:Q03250
Length = 176
Score = 144 (55.7 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 25/78 (32%), Positives = 49/78 (62%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAV-DKVFS 68
+ FVG L W L+ F++YG ++++ ++ D+ TG S+GFGFVTF++++A+ D +
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 69 TDSHVLEGSRLSIQPSDS 86
+ L+G +++ + S
Sbjct: 69 MNGQDLDGRSITVNEAQS 86
>WB|WBGene00001999 [details] [associations]
symbol:hrp-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000781 "chromosome, telomeric region" evidence=IDA]
[GO:0031581 "hemidesmosome assembly" evidence=IGI] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0003723 "RNA
binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0048477 GO:GO:0003723 GO:GO:0040035 GO:GO:0030529
GO:GO:0040015 GO:GO:0000398 GO:GO:0000781 eggNOG:COG0724
GO:GO:0031581 GeneTree:ENSGT00700000104255 KO:K12741 EMBL:D10877
EMBL:FO081370 PIR:S35500 RefSeq:NP_001023199.1
RefSeq:NP_001040944.1 RefSeq:NP_001040945.1 RefSeq:NP_500326.2
UniGene:Cel.7537 ProteinModelPortal:Q22037 SMR:Q22037 IntAct:Q22037
STRING:Q22037 PaxDb:Q22037 PRIDE:Q22037 EnsemblMetazoa:F42A6.7a.1
EnsemblMetazoa:F42A6.7a.2 GeneID:177101 KEGG:cel:CELE_F42A6.7
UCSC:F42A6.7a.1 CTD:177101 WormBase:F42A6.7a WormBase:F42A6.7b
WormBase:F42A6.7c WormBase:F42A6.7d InParanoid:Q22037 OMA:YGGGWGQ
NextBio:895332 Uniprot:Q22037
Length = 346
Score = 163 (62.4 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 39/132 (29%), Positives = 65/132 (49%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
L KIFVG L + + +++F+S++G+I + VM D T S+GFGFVTF K VD
Sbjct: 22 LRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAM 81
Query: 68 STDSHVLEGSRLSIQ---PSDSHNRMAENMEDRFNQACDYLPSLVKKLDSSTLLKFYALY 124
H+++G + + P D NR N+ + Y+ + + L +++ Y
Sbjct: 82 KQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRL----YVSGVREDHTEDMLTEYFTKY 137
Query: 125 KQATVGQCNIDK 136
T + +DK
Sbjct: 138 GTVTKSEIILDK 149
Score = 131 (51.2 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 26/96 (27%), Positives = 53/96 (55%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE 61
S S +++V + + + L ++F++YG + + ++ DK T +GFGFVTF + +
Sbjct: 107 SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHD 166
Query: 62 AVDKVFSTDSHVLEGSRLSIQPSDSHNRMAENMEDR 97
+VD+ SH++ G R ++ S + M++ +R
Sbjct: 167 SVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQMNR 202
>RGD|620365 [details] [associations]
symbol:Hnrpd "heterogeneous nuclear ribonucleoprotein D"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000291 "nuclear-transcribed mRNA catabolic
process, exonucleolytic" evidence=TAS] [GO:0003723 "RNA binding"
evidence=ISO;ISS] [GO:0003729 "mRNA binding" evidence=TAS]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006913 "nucleocytoplasmic transport"
evidence=TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO;ISS] [GO:0042162 "telomeric DNA binding"
evidence=IEA;ISO;ISS] [GO:0043488 "regulation of mRNA stability"
evidence=IEA;ISO] [GO:0048255 "mRNA stabilization" evidence=IDA]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:620365 GO:GO:0005829 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0006913 GO:GO:0048255 GO:GO:0030529
GO:GO:0042162 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K13044
OrthoDB:EOG49W2FZ GermOnline:ENSRNOG00000002292 InterPro:IPR012956
Pfam:PF08143 EMBL:AB046615 EMBL:AB046616 EMBL:AB046617
EMBL:AB046618 IPI:IPI00201032 IPI:IPI00231383 IPI:IPI00231384
IPI:IPI00231385 RefSeq:NP_001076008.1 RefSeq:NP_001076009.1
RefSeq:NP_001076010.1 RefSeq:NP_077380.2 UniGene:Rn.94022
ProteinModelPortal:Q9JJ54 SMR:Q9JJ54 STRING:Q9JJ54
PhosphoSite:Q9JJ54 PRIDE:Q9JJ54 GeneID:79256 KEGG:rno:79256
UCSC:RGD:620365 CTD:79256 InParanoid:Q9JJ54 NextBio:614748
ArrayExpress:Q9JJ54 Genevestigator:Q9JJ54 GO:GO:0000291
Uniprot:Q9JJ54
Length = 353
Score = 163 (62.4 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 28/67 (41%), Positives = 43/67 (64%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + +LK +FS++G +++ ++ D TG S+GFGFV F+ E+VDKV
Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155
Query: 70 DSHVLEG 76
H L G
Sbjct: 156 KEHKLNG 162
>UNIPROTKB|Q9JJ54 [details] [associations]
symbol:Hnrnpd "Heterogeneous nuclear ribonucleoprotein D0"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:620365 GO:GO:0005829
GO:GO:0005634 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0006913 GO:GO:0048255 GO:GO:0030529 GO:GO:0042162
HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K13044 OrthoDB:EOG49W2FZ
GermOnline:ENSRNOG00000002292 InterPro:IPR012956 Pfam:PF08143
EMBL:AB046615 EMBL:AB046616 EMBL:AB046617 EMBL:AB046618
IPI:IPI00201032 IPI:IPI00231383 IPI:IPI00231384 IPI:IPI00231385
RefSeq:NP_001076008.1 RefSeq:NP_001076009.1 RefSeq:NP_001076010.1
RefSeq:NP_077380.2 UniGene:Rn.94022 ProteinModelPortal:Q9JJ54
SMR:Q9JJ54 STRING:Q9JJ54 PhosphoSite:Q9JJ54 PRIDE:Q9JJ54
GeneID:79256 KEGG:rno:79256 UCSC:RGD:620365 CTD:79256
InParanoid:Q9JJ54 NextBio:614748 ArrayExpress:Q9JJ54
Genevestigator:Q9JJ54 GO:GO:0000291 Uniprot:Q9JJ54
Length = 353
Score = 163 (62.4 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 28/67 (41%), Positives = 43/67 (64%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + +LK +FS++G +++ ++ D TG S+GFGFV F+ E+VDKV
Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155
Query: 70 DSHVLEG 76
H L G
Sbjct: 156 KEHKLNG 162
>UNIPROTKB|F1PSM6 [details] [associations]
symbol:ACBD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS51228 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
GeneTree:ENSGT00680000099745 InterPro:IPR022408 SUPFAM:SSF47027
PROSITE:PS00880 InterPro:IPR016347 PIRSF:PIRSF002412 OMA:GRGHRMQ
EMBL:AAEX03001169 Ensembl:ENSCAFT00000007030 Uniprot:F1PSM6
Length = 482
Score = 165 (63.1 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 64/255 (25%), Positives = 119/255 (46%)
Query: 95 EDRFNQACDYLPSLVK----KLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNA 150
E RF A + SL K + + +LKFY+ YKQAT G C + +P +++ + K++A
Sbjct: 9 ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLARPGFWDPIGRYKWDA 68
Query: 151 WNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQ-EEINWDWKP-----NQKAMSKYIALLN 204
W+SLG M K EAM Y+ +K++ E+ EE+ P K + L +
Sbjct: 69 WSSLGDMTKEEAMIAYVEEMKKILETMPMTEKVEELLHVIGPFYEIVEDKKCGRTSDLTS 128
Query: 205 EV-DASWEDKEQEEINWD-ESQESGSKENEGQTKGWVNVSSMINDESQLDDNEKNIYEWA 262
++ + + +N ES +SG++ E + + + Q D+++K + + A
Sbjct: 129 DLGNVLTSTPNAKTVNGKAESSDSGAESEEEEAQ------EEVKGAEQSDNDKKMMKKSA 182
Query: 263 KEGKLDMLVKQLTKLKDFNINQLDENGLNCLHWACDRG--HLKVVQHLIEKCGADVNVTD 320
L+++V T KD + ++ +N ++ R +K V +EK ++ D
Sbjct: 183 DHKNLEVIVTN-TYDKDHSAQEI-QNDIHASSSLNGRSAEEIKAVDENLEKTAICIH-QD 239
Query: 321 SDGDYGLDYAKAIEH 335
+ D+ D + I+H
Sbjct: 240 INDDHVEDVS-GIQH 253
>UNIPROTKB|F1RVK3 [details] [associations]
symbol:ACBD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
GO:GO:0043231 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
GeneTree:ENSGT00680000099745 InterPro:IPR022408 SUPFAM:SSF47027
PROSITE:PS00880 InterPro:IPR016347 PIRSF:PIRSF002412 OMA:GRGHRMQ
EMBL:CU928644 EMBL:FP016148 Ensembl:ENSSSCT00000012108
Uniprot:F1RVK3
Length = 524
Score = 165 (63.1 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 33/83 (39%), Positives = 51/83 (61%)
Query: 95 EDRFNQACDYLPSLVK----KLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNA 150
E RF A + SL K + + +LKFY+ YKQAT G C + +P +++ + K++A
Sbjct: 45 ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 104
Query: 151 WNSLGQMAKSEAMSKYIALLKEV 173
WNSLG+M K EAM Y+ +K++
Sbjct: 105 WNSLGEMTKEEAMIAYVEEMKKI 127
>UNIPROTKB|Q9MZG3 [details] [associations]
symbol:DBIL5 "Diazepam-binding inhibitor-like 5"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008289 "lipid binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
GO:GO:0005737 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0006810
GO:GO:0000062 eggNOG:COG4281 GeneTree:ENSGT00680000099745
GO:GO:0008289 InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880
HOGENOM:HOG000261845 HOVERGEN:HBG000398 EMBL:AF229798 EMBL:BC103431
IPI:IPI00700888 RefSeq:NP_847892.1 UniGene:Bt.22874
ProteinModelPortal:Q9MZG3 Ensembl:ENSBTAT00000017822 GeneID:353112
KEGG:bta:353112 CTD:13168 InParanoid:Q9MZG3 OMA:QATQGDC
OrthoDB:EOG4KD6NN NextBio:20812696 Uniprot:Q9MZG3
Length = 87
Score = 142 (55.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 98 FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQM 157
F AC + L + L Y+ YKQAT G CNI P +++AK+K+ AWN M
Sbjct: 6 FEMACAAIKQLKGPVSDQEKLLVYSYYKQATQGDCNIPAPPATDLKAKAKWEAWNENKGM 65
Query: 158 AKSEAMSKYIALLKEV 173
+K +AM YIA ++E+
Sbjct: 66 SKMDAMRIYIAKVEEL 81
>UNIPROTKB|J9NTT2 [details] [associations]
symbol:DBI "Acyl-CoA-binding protein" species:9615 "Canis
lupus familiaris" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS51228 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
GeneTree:ENSGT00680000099745 InterPro:IPR022408 SUPFAM:SSF47027
PROSITE:PS00880 EMBL:AAEX03011881 Ensembl:ENSCAFT00000049728
Uniprot:J9NTT2
Length = 137
Score = 142 (55.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 91 AENMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNA 150
A+ +E F++A + + L K +L Y+ YKQATVG N ++P ++ K+K++A
Sbjct: 49 ADRLEAEFDKAAEDVKHLKTKPADDEMLYIYSHYKQATVGDINTERPGLLDLRGKAKWDA 108
Query: 151 WNSLGQMAKSEAMSKYIALLKEV 173
WN L +K +AM Y+ ++++
Sbjct: 109 WNQLKGTSKEDAMKAYVNKVEDL 131
>UNIPROTKB|F6VZ39 [details] [associations]
symbol:RBM38 "RNA-binding protein 38" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL109955
HGNC:HGNC:15818 IPI:IPI00927190 ProteinModelPortal:F6VZ39
SMR:F6VZ39 PRIDE:F6VZ39 Ensembl:ENST00000344785 ArrayExpress:F6VZ39
Bgee:F6VZ39 Uniprot:F6VZ39
Length = 123
Score = 142 (55.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 25/72 (34%), Positives = 45/72 (62%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
KIFVG LP+ + L+K+F +G I A V+ D+ TG S+G+GFVT ++ A ++
Sbjct: 12 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71
Query: 70 DSHVLEGSRLSI 81
+ +++G + ++
Sbjct: 72 PNPIIDGRKANV 83
>UNIPROTKB|H0YJW7 [details] [associations]
symbol:SLIRP "SRA stem-loop-interacting RNA-binding
protein, mitochondrial" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC008044 HGNC:HGNC:20495
ChiTaRS:SLIRP EMBL:AC008372 Ensembl:ENST00000556310 Bgee:H0YJW7
Uniprot:H0YJW7
Length = 76
Score = 142 (55.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 21/65 (32%), Positives = 41/65 (63%)
Query: 12 FVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFSTDS 71
FV +PWT + ++LK+ F+++G + + FDK TG +G G+V F ++E + ++
Sbjct: 6 FVRRIPWTAASSQLKEHFAQFGHVRRCILPFDKETGFHRGLGWVQFSSEEGLRNALQQEN 65
Query: 72 HVLEG 76
H+++G
Sbjct: 66 HIIDG 70
>TAIR|locus:2027438 [details] [associations]
symbol:GR-RBP6 "glycine-rich RNA-binding protein 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0005768 "endosome" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005802 "trans-Golgi network"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CP002684 GO:GO:0005794
GO:GO:0000166 GO:GO:0005768 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005802 HSSP:P09651 EMBL:AC026238 EMBL:BT005999 EMBL:AK227482
EMBL:AY085358 IPI:IPI00537929 PIR:A86320 RefSeq:NP_173298.1
UniGene:At.356 UniGene:At.41785 ProteinModelPortal:Q9FZ84
SMR:Q9FZ84 IntAct:Q9FZ84 PaxDb:Q8LEL7 PRIDE:Q9FZ84
EnsemblPlants:AT1G18630.1 GeneID:838444 KEGG:ath:AT1G18630
GeneFarm:3974 TAIR:At1g18630 eggNOG:NOG255734 InParanoid:Q9FZ84
OMA:IFRQPRA PhylomeDB:Q9FZ84 ProtClustDB:CLSN2914186
Genevestigator:Q9FZ84 Uniprot:Q9FZ84
Length = 155
Score = 142 (55.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
+KIFVG L + LK+ F +G+I++A V+ D+ +GLS+GFGFVT+ + E +
Sbjct: 36 SKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQ 95
Query: 69 T-DSHVLEGSRLSIQPSDS 86
+ L+G + + P+DS
Sbjct: 96 AMQNKELDGRIIGVHPADS 114
>TAIR|locus:2196521 [details] [associations]
symbol:AT1G22330 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:AC068562 EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 HSSP:P09651 HOGENOM:HOG000276232
ProtClustDB:CLSN2689288 IPI:IPI00540466 PIR:B86356
RefSeq:NP_564168.2 UniGene:At.41608 ProteinModelPortal:Q9LME7
SMR:Q9LME7 STRING:Q9LME7 PRIDE:Q9LME7 EnsemblPlants:AT1G22330.1
GeneID:838839 KEGG:ath:AT1G22330 TAIR:At1g22330 InParanoid:Q9LME7
OMA:TESHAPQ PhylomeDB:Q9LME7 Genevestigator:Q9LME7 Uniprot:Q9LME7
Length = 291
Score = 159 (61.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 25/69 (36%), Positives = 48/69 (69%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L W +E++++F ++G+I+ A ++ DK TG SKG+GFVTF++ ++ + +
Sbjct: 18 KVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKATGKSKGYGFVTFRDSDSATRAVAD 77
Query: 70 DSHVLEGSR 78
+ V++G +
Sbjct: 78 PNPVIDGRK 86
>MGI|MGI:1921409 [details] [associations]
symbol:Acbd5 "acyl-Coenzyme A binding domain containing 5"
species:10090 "Mus musculus" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005777 "peroxisome" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008289 "lipid binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
MGI:MGI:1921409 GO:GO:0016021 Gene3D:1.20.80.10 InterPro:IPR014352
GO:GO:0006810 GO:GO:0005778 GO:GO:0000062 eggNOG:COG4281
GeneTree:ENSGT00680000099745 GO:GO:0008289 InterPro:IPR022408
SUPFAM:SSF47027 PROSITE:PS00880 CTD:91452 HOVERGEN:HBG106445
InterPro:IPR016347 PIRSF:PIRSF002412 OrthoDB:EOG4J3WGS
EMBL:AK005001 EMBL:AK050450 EMBL:AK147839 EMBL:AL845257
EMBL:BC035202 EMBL:BC053518 EMBL:BC061484 EMBL:BC084584
IPI:IPI00229804 IPI:IPI00754110 IPI:IPI00845729
RefSeq:NP_001095906.1 RefSeq:NP_001095907.1 RefSeq:NP_001095908.1
RefSeq:NP_083069.1 UniGene:Mm.181973 UniGene:Mm.439111 HSSP:P07107
ProteinModelPortal:Q5XG73 SMR:Q5XG73 STRING:Q5XG73
PhosphoSite:Q5XG73 PaxDb:Q5XG73 PRIDE:Q5XG73
Ensembl:ENSMUST00000028121 Ensembl:ENSMUST00000114523
Ensembl:ENSMUST00000114526 Ensembl:ENSMUST00000144088
Ensembl:ENSMUST00000155602 GeneID:74159 KEGG:mmu:74159
UCSC:uc008inx.1 UCSC:uc008iny.1 UCSC:uc008inz.1 NextBio:339946
Bgee:Q5XG73 CleanEx:MM_ACBD5 Genevestigator:Q5XG73 Uniprot:Q5XG73
Length = 508
Score = 164 (62.8 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 54/178 (30%), Positives = 87/178 (48%)
Query: 95 EDRFNQACDYLPSLVK----KLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNA 150
E RF A + SL K + + +LKFY+ YKQAT G C + +P +++ + K++A
Sbjct: 45 ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 104
Query: 151 WNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQ-EEINWDWKP-----NQKAMSKYIALLN 204
W+SLG M K EAM Y+ +K++ E+ EE+ P K SK L +
Sbjct: 105 WSSLGDMTKEEAMIAYVEEMKKIIETMPMTEKVEELLHVIGPFYEIVEDKKSSKSSDLTS 164
Query: 205 EVDASWEDKEQEEINWD-ESQESG--SKENEGQTKGWVNVSSMINDESQLDDN-EKNI 258
++ + +N ES +SG S+E E Q + S +D+ L + +KN+
Sbjct: 165 DLGNVLTSSNAKAVNGKAESSDSGAESEEEEAQEELKGAEQSGSDDKKTLKKSADKNL 222
>TAIR|locus:504955752 [details] [associations]
symbol:AT3G13224 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441 HSSP:Q14103
KO:K12741 OMA:HAINGHH EMBL:AP002042 EMBL:AY080630 EMBL:AY123003
EMBL:AK221448 IPI:IPI00534312 RefSeq:NP_683559.2 UniGene:At.27259
ProteinModelPortal:Q9LHL2 SMR:Q9LHL2 IntAct:Q9LHL2 PRIDE:Q9LHL2
EnsemblPlants:AT3G13224.2 GeneID:820515 KEGG:ath:AT3G13224
TAIR:At3g13224 InParanoid:Q9LHL2 PhylomeDB:Q9LHL2
ProtClustDB:CLSN2918087 Genevestigator:Q9LHL2 Uniprot:Q9LHL2
Length = 358
Score = 161 (61.7 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 34/84 (40%), Positives = 54/84 (64%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
KIFVG +P TV+ +ELK FF++YG ++ V+ D T S+GFGFV F ++E VD++ S
Sbjct: 110 KIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSK 169
Query: 70 DSHV-LEGSRLSI---QPSDSHNR 89
+ + + +++ I +P S NR
Sbjct: 170 GNMIDMADTQVEIKKAEPKKSLNR 193
Score = 156 (60.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
KIF+G L ++ K F +YG+I ++ +M D++TG +GFGF+TF + VDKV
Sbjct: 20 KIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIE- 78
Query: 70 DSHVLEGSRLSIQ 82
D+HV+ G ++ I+
Sbjct: 79 DTHVINGKQVEIK 91
>UNIPROTKB|F1Q1J7 [details] [associations]
symbol:LOC480641 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS51228 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
GeneTree:ENSGT00680000099745 InterPro:IPR022408 SUPFAM:SSF47027
PROSITE:PS00880 OMA:QATQGDC EMBL:AAEX03006687 RefSeq:XP_537760.3
Ensembl:ENSCAFT00000030378 GeneID:480641 KEGG:cfa:480641
Uniprot:F1Q1J7
Length = 87
Score = 141 (54.7 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 98 FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQM 157
F AC + L + L Y+ YKQAT G CNI P +++AK+K+ AWN M
Sbjct: 6 FEMACAAIKQLKGPVSDQEKLLVYSFYKQATQGDCNIPAPPATDVKAKAKWEAWNQNKGM 65
Query: 158 AKSEAMSKYIALLKEV 173
+K +AM Y+A ++E+
Sbjct: 66 SKMDAMRIYVAKVEEL 81
>ZFIN|ZDB-GENE-070424-97 [details] [associations]
symbol:hnrnpd "heterogeneous nuclear
ribonucleoprotein D" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-070424-97 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104347
OMA:PNQNWNQ InterPro:IPR012956 Pfam:PF08143 EMBL:CR847788
IPI:IPI00512852 Ensembl:ENSDART00000101414
Ensembl:ENSDART00000123048 Uniprot:F1Q8A5
Length = 314
Score = 159 (61.0 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L W + +LK +F+++G++++ ++ D TG S+GFGFV F+ E+V+KV +
Sbjct: 55 KMFVGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPLTGRSRGFGFVLFKEAESVEKVITQ 114
Query: 70 DSHVLEG 76
H L G
Sbjct: 115 KEHKLNG 121
Score = 112 (44.5 bits), Expect = 0.00095, P = 0.00095
Identities = 21/88 (23%), Positives = 45/88 (51%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ KIFVG L +++++F YG++ + + + T +GF F+TF+ +E V K+
Sbjct: 138 VKKIFVGGLSPDTPEEKIREYFDAYGEVESIELPMENKTNKRRGFCFITFKEEEPVKKIM 197
Query: 68 STDSHVLEGSRLSIQPSDSHNRMAENME 95
H + S+ ++ + S + + +
Sbjct: 198 EKKYHNIGLSKCEVKVAMSKEQYQQQQQ 225
>RGD|1309950 [details] [associations]
symbol:Hnrpdl "heterogeneous nuclear ribonucleoprotein D-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1309950 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
eggNOG:COG0724 HOVERGEN:HBG002295 HSSP:Q14103 CTD:9987 KO:K13044
EMBL:BC104683 IPI:IPI00363719 RefSeq:NP_001028868.1
UniGene:Rn.102146 ProteinModelPortal:Q3SWU3 SMR:Q3SWU3
PhosphoSite:Q3SWU3 PRIDE:Q3SWU3 GeneID:305178 KEGG:rno:305178
NextBio:654187 Genevestigator:Q3SWU3 Uniprot:Q3SWU3
Length = 322
Score = 159 (61.0 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
NK+F+G L W S +L ++ S +G++++ ++ D TG S+GFGFV F++ +VDKV
Sbjct: 51 NKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLE 110
Query: 69 TDSHVLEG 76
H L+G
Sbjct: 111 LKEHKLDG 118
Score = 121 (47.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 24/89 (26%), Positives = 46/89 (51%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L S ++K++F +G+I N + D T +GF F+T+ ++E V K+ +
Sbjct: 137 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLES 196
Query: 70 DSHVLEGSRLSI---QPSDSHNRMAENME 95
H + + I QP + + + + +
Sbjct: 197 RYHQIGSGKCEIKVAQPKEVYRQQQQQQK 225
>UNIPROTKB|Q3SWU3 [details] [associations]
symbol:Hnrpdl "Heterogeneous nuclear ribonucleoprotein
D-like" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1309950
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
eggNOG:COG0724 HOVERGEN:HBG002295 HSSP:Q14103 CTD:9987 KO:K13044
EMBL:BC104683 IPI:IPI00363719 RefSeq:NP_001028868.1
UniGene:Rn.102146 ProteinModelPortal:Q3SWU3 SMR:Q3SWU3
PhosphoSite:Q3SWU3 PRIDE:Q3SWU3 GeneID:305178 KEGG:rno:305178
NextBio:654187 Genevestigator:Q3SWU3 Uniprot:Q3SWU3
Length = 322
Score = 159 (61.0 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
NK+F+G L W S +L ++ S +G++++ ++ D TG S+GFGFV F++ +VDKV
Sbjct: 51 NKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLE 110
Query: 69 TDSHVLEG 76
H L+G
Sbjct: 111 LKEHKLDG 118
Score = 121 (47.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 24/89 (26%), Positives = 46/89 (51%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L S ++K++F +G+I N + D T +GF F+T+ ++E V K+ +
Sbjct: 137 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLES 196
Query: 70 DSHVLEGSRLSI---QPSDSHNRMAENME 95
H + + I QP + + + + +
Sbjct: 197 RYHQIGSGKCEIKVAQPKEVYRQQQQQQK 225
>UNIPROTKB|Q96DH6 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0008266
"poly(U) RNA binding" evidence=IEA] [GO:0048864 "stem cell
development" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 KO:K14411 OrthoDB:EOG48GW3J EMBL:BC001526
EMBL:BC017560 EMBL:AK093888 IPI:IPI00073713 IPI:IPI00167806
IPI:IPI00455161 RefSeq:NP_620412.1 RefSeq:NP_733839.1
UniGene:Hs.658922 ProteinModelPortal:Q96DH6 SMR:Q96DH6
IntAct:Q96DH6 STRING:Q96DH6 PhosphoSite:Q96DH6 DMDM:51316513
PaxDb:Q96DH6 PRIDE:Q96DH6 DNASU:124540 Ensembl:ENST00000284073
Ensembl:ENST00000322684 Ensembl:ENST00000579180 GeneID:124540
KEGG:hsa:124540 UCSC:uc002iuz.1 UCSC:uc002iva.3 CTD:124540
GeneCards:GC17P055334 HGNC:HGNC:18585 HPA:CAB022300 MIM:607897
neXtProt:NX_Q96DH6 PharmGKB:PA38590 InParanoid:Q96DH6 OMA:ISDCTIM
PhylomeDB:Q96DH6 ChiTaRS:MSI2 GenomeRNAi:124540 NextBio:81316
ArrayExpress:Q96DH6 Bgee:Q96DH6 CleanEx:HS_MSI2
Genevestigator:Q96DH6 GermOnline:ENSG00000153944 Uniprot:Q96DH6
Length = 328
Score = 159 (61.0 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 33/83 (39%), Positives = 48/83 (57%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W S + L+ +FS++G+I VM D T S+GFGFVTF + +VDKV
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 70 DSHVLEGSRLSIQPSDSHNRMAE 92
H L+ +I P + R A+
Sbjct: 82 PHHELDSK--TIDPKVAFPRRAQ 102
Score = 151 (58.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 5 IRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVD 64
+ + KIFVG L ++K++F ++G++ +A +MFDK T +GFGFVTF+N++ V+
Sbjct: 106 VTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVE 165
Query: 65 KVFSTDSH 72
KV H
Sbjct: 166 KVCEIHFH 173
>UNIPROTKB|E2R6G2 [details] [associations]
symbol:CIRBP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
ProteinModelPortal:E2R6G2 Ensembl:ENSCAFT00000031013 Uniprot:E2R6G2
Length = 172
Score = 140 (54.3 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN-KEAVDKVFS 68
K+FVG L + + L++ FS+YGQI V+ D+ T S+GFGFVTF+N +A D + +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 69 TDSHVLEGSRLSIQPS--DSHNR 89
+ ++G ++ + + S NR
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>UNIPROTKB|F6XHA7 [details] [associations]
symbol:CIRBP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K13195 CTD:1153
OMA:ENRSRGY GeneTree:ENSGT00700000104309 Ensembl:ENSCAFT00000031013
EMBL:AAEX03012655 RefSeq:XP_868600.1 GeneID:476755 KEGG:cfa:476755
Uniprot:F6XHA7
Length = 185
Score = 140 (54.3 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN-KEAVDKVFS 68
K+FVG L + + L++ FS+YGQI V+ D+ T S+GFGFVTF+N +A D + +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 69 TDSHVLEGSRLSIQPS--DSHNR 89
+ ++G ++ + + S NR
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>UNIPROTKB|K7EJV5 [details] [associations]
symbol:CIRBP "Cold-inducible RNA-binding protein"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
HGNC:HGNC:1982 Ensembl:ENST00000588411 Uniprot:K7EJV5
Length = 105
Score = 140 (54.3 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN-KEAVDKVFS 68
K+FVG L + + L++ FS+YGQI V+ D+ T S+GFGFVTF+N +A D + +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 69 TDSHVLEGSRLSIQPS--DSHNR 89
+ ++G ++ + + S NR
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>UNIPROTKB|K7EMY9 [details] [associations]
symbol:CIRBP "Cold-inducible RNA-binding protein"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
HGNC:HGNC:1982 Ensembl:ENST00000586548 Uniprot:K7EMY9
Length = 159
Score = 140 (54.3 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN-KEAVDKVFS 68
K+FVG L + + L++ FS+YGQI V+ D+ T S+GFGFVTF+N +A D + +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 69 TDSHVLEGSRLSIQPS--DSHNR 89
+ ++G ++ + + S NR
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>UNIPROTKB|K7ENX8 [details] [associations]
symbol:CIRBP "Cold-inducible RNA-binding protein"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
HGNC:HGNC:1982 Ensembl:ENST00000589266 Uniprot:K7ENX8
Length = 89
Score = 140 (54.3 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 29/76 (38%), Positives = 48/76 (63%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN-KEAVDKVFS 68
K+FVG L + + L++ FS+YGQI V+ D+ T S+GFGFVTF+N +A D + +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 69 TDSHVLEGSRLSI-QP 83
+ ++G ++ + QP
Sbjct: 67 MNGKSVDGRQIRVDQP 82
>UNIPROTKB|K7EPM4 [details] [associations]
symbol:CIRBP "Cold-inducible RNA-binding protein"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
HGNC:HGNC:1982 Ensembl:ENST00000585913 Ensembl:ENST00000586636
Ensembl:ENST00000586773 Ensembl:ENST00000589235
Ensembl:ENST00000589686 Ensembl:ENST00000591935 Uniprot:K7EPM4
Length = 168
Score = 140 (54.3 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN-KEAVDKVFS 68
K+FVG L + + L++ FS+YGQI V+ D+ T S+GFGFVTF+N +A D + +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 69 TDSHVLEGSRLSIQPS--DSHNR 89
+ ++G ++ + + S NR
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>UNIPROTKB|K7ER40 [details] [associations]
symbol:CIRBP "Cold-inducible RNA-binding protein"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
HGNC:HGNC:1982 Ensembl:ENST00000591659 Uniprot:K7ER40
Length = 174
Score = 140 (54.3 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN-KEAVDKVFS 68
K+FVG L + + L++ FS+YGQI V+ D+ T S+GFGFVTF+N +A D + +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 69 TDSHVLEGSRLSIQPS--DSHNR 89
+ ++G ++ + + S NR
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>UNIPROTKB|Q14011 [details] [associations]
symbol:CIRBP "Cold-inducible RNA-binding protein"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISS;IDA] [GO:0048255 "mRNA stabilization"
evidence=IDA] [GO:0070181 "SSU rRNA binding" evidence=IDA]
[GO:0030371 "translation repressor activity" evidence=ISS]
[GO:0034063 "stress granule assembly" evidence=ISS] [GO:0009411
"response to UV" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003730 "mRNA
3'-UTR binding" evidence=IDA] [GO:0045727 "positive regulation of
translation" evidence=IDA] [GO:0009409 "response to cold"
evidence=TAS] [GO:0017148 "negative regulation of translation"
evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0009411
GO:GO:0005654 GO:GO:0000166 GO:GO:0030371 GO:GO:0009409
Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
GO:GO:0010494 GO:GO:0034063 eggNOG:COG0724 HOVERGEN:HBG107480
GO:GO:0070181 KO:K13195 CTD:1153 EMBL:D78134 EMBL:AF021336
EMBL:AC004258 EMBL:BC000403 EMBL:BC000901 IPI:IPI00641579
RefSeq:NP_001271.1 UniGene:Hs.618145 UniGene:Hs.634522 PDB:1X5S
PDBsum:1X5S ProteinModelPortal:Q14011 SMR:Q14011 IntAct:Q14011
MINT:MINT-5004534 STRING:Q14011 PhosphoSite:Q14011 DMDM:5921786
REPRODUCTION-2DPAGE:IPI00180954 PaxDb:Q14011 PRIDE:Q14011
DNASU:1153 Ensembl:ENST00000320936 GeneID:1153 KEGG:hsa:1153
UCSC:uc002lrr.4 GeneCards:GC19P001269 HGNC:HGNC:1982 MIM:602649
neXtProt:NX_Q14011 PharmGKB:PA26519 HOGENOM:HOG000276232
InParanoid:Q14011 OMA:ENRSRGY OrthoDB:EOG4HHP40 PhylomeDB:Q14011
ChiTaRS:CIRBP EvolutionaryTrace:Q14011 GenomeRNAi:1153 NextBio:4788
ArrayExpress:Q14011 Bgee:Q14011 CleanEx:HS_CIRBP
Genevestigator:Q14011 GermOnline:ENSG00000099622 Uniprot:Q14011
Length = 172
Score = 140 (54.3 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN-KEAVDKVFS 68
K+FVG L + + L++ FS+YGQI V+ D+ T S+GFGFVTF+N +A D + +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 69 TDSHVLEGSRLSIQPS--DSHNR 89
+ ++G ++ + + S NR
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>UNIPROTKB|F1S6R1 [details] [associations]
symbol:CIRBP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070181 "SSU rRNA binding" evidence=IEA] [GO:0048255
"mRNA stabilization" evidence=IEA] [GO:0045727 "positive regulation
of translation" evidence=IEA] [GO:0034063 "stress granule assembly"
evidence=IEA] [GO:0030371 "translation repressor activity"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0009411 GO:GO:0000166 GO:GO:0030371 Gene3D:3.30.70.330
GO:GO:0048255 GO:GO:0003730 GO:GO:0045727 GO:GO:0010494
GO:GO:0034063 GO:GO:0070181 OMA:ENRSRGY
GeneTree:ENSGT00700000104309 EMBL:CU929580
Ensembl:ENSSSCT00000014671 Uniprot:F1S6R1
Length = 172
Score = 140 (54.3 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN-KEAVDKVFS 68
K+FVG L + + L++ FS+YGQI V+ D+ T S+GFGFVTF+N +A D + +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 69 TDSHVLEGSRLSIQPS--DSHNR 89
+ ++G ++ + + S NR
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>UNIPROTKB|Q5RF83 [details] [associations]
symbol:CIRBP "Cold-inducible RNA-binding protein"
species:9601 "Pongo abelii" [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0009411 "response to UV"
evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
evidence=ISS] [GO:0017148 "negative regulation of translation"
evidence=ISS] [GO:0030371 "translation repressor activity"
evidence=ISS] [GO:0034063 "stress granule assembly" evidence=ISS]
[GO:0045727 "positive regulation of translation" evidence=ISS]
[GO:0048255 "mRNA stabilization" evidence=ISS] [GO:0070181 "SSU
rRNA binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0009411 GO:GO:0005654 GO:GO:0006950 GO:GO:0000166
GO:GO:0030371 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730
GO:GO:0045727 GO:GO:0010494 GO:GO:0034063 HOVERGEN:HBG107480
GO:GO:0070181 KO:K13195 CTD:1153 EMBL:CR857278
RefSeq:NP_001124692.1 UniGene:Pab.19491 ProteinModelPortal:Q5RF83
SMR:Q5RF83 PRIDE:Q5RF83 GeneID:100171539 KEGG:pon:100171539
Uniprot:Q5RF83
Length = 172
Score = 140 (54.3 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN-KEAVDKVFS 68
K+FVG L + + L++ FS+YGQI V+ D+ T S+GFGFVTF+N +A D + +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 69 TDSHVLEGSRLSIQPS--DSHNR 89
+ ++G ++ + + S NR
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>TAIR|locus:2077392 [details] [associations]
symbol:AT3G07810 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005576 "extracellular region" evidence=ISM] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002686 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K14411 IPI:IPI00546643 RefSeq:NP_850539.1 UniGene:At.19375
ProteinModelPortal:F4JFN7 SMR:F4JFN7 PRIDE:F4JFN7
EnsemblPlants:AT3G07810.2 GeneID:819972 KEGG:ath:AT3G07810
OMA:YYIGNTN Uniprot:F4JFN7
Length = 495
Score = 162 (62.1 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
KIFVG LP +V+ ++ K +F ++G + VM+D NT +GFGF+T+ ++EAV+KV
Sbjct: 109 KIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLK 168
Query: 70 DSHVLEGSRLSIQ 82
H L G + ++
Sbjct: 169 TFHELNGKMVEVK 181
Score = 161 (61.7 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 31/92 (33%), Positives = 58/92 (63%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G + W + LK++FS +G+++ A ++ D+ TG ++GFGFV F + AV ++ T
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADP-AVAEIVIT 65
Query: 70 DSHVLEGSRLSIQPSDSHNRMAENMEDRFNQA 101
+ H ++G RL ++ + R +NM +R N +
Sbjct: 66 EKHNIDG-RL-VEAKKAVPRDDQNMVNRSNSS 95
>MGI|MGI:1923876 [details] [associations]
symbol:Msi2 "musashi RNA-binding protein 2" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005844
"polysome" evidence=IDA] [GO:0008266 "poly(U) RNA binding"
evidence=IDA] [GO:0048864 "stem cell development" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1923876 GO:GO:0005737 GO:GO:0008266
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005844 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 GO:GO:0048864 CTD:124540 ChiTaRS:MSI2
EMBL:AB056102 EMBL:AB056103 EMBL:BK001483 EMBL:AK049637
EMBL:AK049688 EMBL:AK051269 IPI:IPI00120924 IPI:IPI00462899
IPI:IPI00462900 RefSeq:NP_473384.1 UniGene:Mm.400451
UniGene:Mm.428433 UniGene:Mm.474737 ProteinModelPortal:Q920Q6
SMR:Q920Q6 STRING:Q920Q6 PhosphoSite:Q920Q6 PaxDb:Q920Q6
PRIDE:Q920Q6 Ensembl:ENSMUST00000092794 Ensembl:ENSMUST00000107909
GeneID:76626 KEGG:mmu:76626 UCSC:uc007kvn.2 InParanoid:Q920Q6
OMA:ENYISAA NextBio:345476 Bgee:Q920Q6 CleanEx:MM_MSI2
Genevestigator:Q920Q6 GermOnline:ENSMUSG00000069769 Uniprot:Q920Q6
Length = 346
Score = 159 (61.0 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 33/83 (39%), Positives = 48/83 (57%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W S + L+ +FS++G+I VM D T S+GFGFVTF + +VDKV
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 70 DSHVLEGSRLSIQPSDSHNRMAE 92
H L+ +I P + R A+
Sbjct: 82 PHHELDSK--TIDPKVAFPRRAQ 102
Score = 151 (58.2 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 5 IRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVD 64
+ + KIFVG L ++K++F ++G++ +A +MFDK T +GFGFVTF+N++ V+
Sbjct: 106 VTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVE 165
Query: 65 KVFSTDSH 72
KV H
Sbjct: 166 KVCEIHFH 173
>MGI|MGI:1346064 [details] [associations]
symbol:Eci2 "enoyl-Coenzyme A delta isomerase 2"
species:10090 "Mus musculus" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004165 "dodecenoyl-CoA delta-isomerase activity"
evidence=ISO;ISS] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0005777
"peroxisome" evidence=ISO;IDA] [GO:0005782 "peroxisomal matrix"
evidence=ISO;ISS] [GO:0006635 "fatty acid beta-oxidation"
evidence=ISO] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0009062 "fatty acid catabolic process" evidence=ISO;ISS]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0016863
"intramolecular oxidoreductase activity, transposing C=C bonds"
evidence=ISO] InterPro:IPR000582 InterPro:IPR001753 Pfam:PF00378
Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228 MGI:MGI:1346064
GO:GO:0005739 GO:GO:0005777 Gene3D:1.20.80.10 InterPro:IPR014352
GO:GO:0006635 GO:GO:0005782 GO:GO:0000062 eggNOG:COG4281
InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880 GO:GO:0004165
GO:GO:0009062 HOVERGEN:HBG006723 GeneTree:ENSGT00670000097595
CTD:10455 KO:K13239 OMA:RWLSDEC OrthoDB:EOG49P9ZK EMBL:AF153613
EMBL:AK009478 EMBL:BC001983 IPI:IPI00322931 IPI:IPI00877214
RefSeq:NP_001103801.1 RefSeq:NP_001103802.1 RefSeq:NP_035998.2
UniGene:Mm.28883 ProteinModelPortal:Q9WUR2 SMR:Q9WUR2 IntAct:Q9WUR2
STRING:Q9WUR2 PhosphoSite:Q9WUR2 PaxDb:Q9WUR2 PRIDE:Q9WUR2
Ensembl:ENSMUST00000021854 Ensembl:ENSMUST00000171229
Ensembl:ENSMUST00000178421 GeneID:23986 KEGG:mmu:23986
UCSC:uc007qbx.2 UCSC:uc007qbz.2 InParanoid:Q9D785 NextBio:303881
Bgee:Q9WUR2 Genevestigator:Q9WUR2 GermOnline:ENSMUSG00000021417
Uniprot:Q9WUR2
Length = 391
Score = 160 (61.4 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 39/116 (33%), Positives = 60/116 (51%)
Query: 90 MAENMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYN 149
M + +D F A + + L K + L+ YALYKQAT G CN+ KP + K+K++
Sbjct: 34 MRASQQD-FENALNQVKLLKKDPGNEVKLRLYALYKQATEGPCNMPKPGMLDFVNKAKWD 92
Query: 150 AWNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQEEINWDWKPNQKAMSKYIALLNE 205
AWN+LG + K A Y+ L+ + + E Q + D K + SK I + +E
Sbjct: 93 AWNALGSLPKETARQNYVDLVSSLSSSSEAPSQGKRGADEKARE---SKDILVTSE 145
>ZFIN|ZDB-GENE-040628-1 [details] [associations]
symbol:rbm24a "RNA binding motif protein 24a"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=ISS] [GO:0043488
"regulation of mRNA stability" evidence=ISS] [GO:0010830
"regulation of myotube differentiation" evidence=ISS] [GO:0003228
"atrial cardiac muscle tissue development" evidence=IMP]
[GO:0072358 "cardiovascular system development" evidence=IGI]
[GO:0001947 "heart looping" evidence=IMP] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-040628-1 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003730 GO:GO:0001947 GO:GO:0043488 eggNOG:COG0724
HOGENOM:HOG000276232 GO:GO:0010830 HSSP:Q9H0Z9 HOVERGEN:HBG108399
EMBL:AB080735 IPI:IPI00506301 RefSeq:NP_998030.1 UniGene:Dr.159425
ProteinModelPortal:Q76LC6 SMR:Q76LC6 STRING:Q76LC6
Ensembl:ENSDART00000110862 GeneID:405801 KEGG:dre:405801 CTD:405801
GeneTree:ENSGT00390000002308 OrthoDB:EOG4KWJVF NextBio:20817766
ArrayExpress:Q76LC6 Bgee:Q76LC6 GO:GO:0003228 Uniprot:Q76LC6
Length = 230
Score = 152 (58.6 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 26/72 (36%), Positives = 47/72 (65%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
KIFVG LP+ + + L+K+F +G+I A V+ D+ TG S+G+GFVT ++ A D+
Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAADRACKD 71
Query: 70 DSHVLEGSRLSI 81
+ +++G + ++
Sbjct: 72 PNPIIDGRKANV 83
>RGD|1310403 [details] [associations]
symbol:Hnrnpa2b1 "heterogeneous nuclear ribonucleoprotein A2/B1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA;ISO]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO;ISS] [GO:0043047
"single-stranded telomeric DNA binding" evidence=IEA;ISO]
[GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
evidence=IEA;ISO] [GO:0050658 "RNA transport" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA;ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1310403 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0030529 GO:GO:0071013 GO:GO:0050658
eggNOG:COG0724 GO:GO:0043047 HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF
CTD:3181 KO:K13158 EMBL:AB006815 EMBL:AB006816 EMBL:AB006817
EMBL:AB006818 IPI:IPI00212969 IPI:IPI00867934 IPI:IPI00923129
IPI:IPI00923135 RefSeq:NP_001098083.1 UniGene:Rn.231911
ProteinModelPortal:A7VJC2 SMR:A7VJC2 STRING:A7VJC2 PRIDE:A7VJC2
GeneID:362361 KEGG:rno:362361 UCSC:RGD:1310403 HOVERGEN:HBG108415
InParanoid:A7VJC2 NextBio:679650 ArrayExpress:A7VJC2
Genevestigator:A7VJC2 Uniprot:A7VJC2
Length = 353
Score = 159 (61.0 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 29/90 (32%), Positives = 48/90 (53%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ K+FVG + + L+ +F EYG+I ++ D+ +G +GFGFVTF + + VDK+F
Sbjct: 111 VKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIF 170
Query: 68 STDSHVLEGSRLSIQPSDSHNRMAENMEDR 97
H + G ++ + S M E R
Sbjct: 171 LQKYHTINGHNAEVRKALSRQEMQEVQSSR 200
Score = 126 (49.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
Q K+F+G L + + L+ ++ ++G++ + VM D + S+GFGFVTF + VD
Sbjct: 19 QFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAA 78
Query: 67 FSTDSHVLEG 76
+ H ++G
Sbjct: 79 MAARPHSIDG 88
>UNIPROTKB|F1N5Z3 [details] [associations]
symbol:ACBD5 "Acyl-CoA-binding domain-containing protein 5"
species:9913 "Bos taurus" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS51228 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
GeneTree:ENSGT00680000099745 InterPro:IPR022408 SUPFAM:SSF47027
PROSITE:PS00880 IPI:IPI00711675 InterPro:IPR016347
PIRSF:PIRSF002412 EMBL:DAAA02035354 Ensembl:ENSBTAT00000048178
ArrayExpress:F1N5Z3 Uniprot:F1N5Z3
Length = 522
Score = 162 (62.1 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 95 EDRFNQACDYLPSLVK----KLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNA 150
E RF A + SL K + + +LKFY+ YKQAT G C + KP +++ + K++A
Sbjct: 43 ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSKPGFWDPVGRYKWDA 102
Query: 151 WNSLGQMAKSEAMSKYIALLKEV 173
W+SLG M K EAM Y+ +K++
Sbjct: 103 WSSLGDMTKEEAMIAYVEEMKKI 125
>UNIPROTKB|F1MEK6 [details] [associations]
symbol:ACBD5 "Acyl-CoA-binding domain-containing protein 5"
species:9913 "Bos taurus" [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] [GO:0000062
"fatty-acyl-CoA binding" evidence=IEA] InterPro:IPR000582
Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228 GO:GO:0043231
Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
GeneTree:ENSGT00680000099745 InterPro:IPR022408 SUPFAM:SSF47027
PROSITE:PS00880 IPI:IPI00711675 UniGene:Bt.87957 InterPro:IPR016347
PIRSF:PIRSF002412 OMA:GRGHRMQ EMBL:DAAA02035354
Ensembl:ENSBTAT00000022964 ArrayExpress:F1MEK6 Uniprot:F1MEK6
Length = 533
Score = 162 (62.1 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 95 EDRFNQACDYLPSLVK----KLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNA 150
E RF A + SL K + + +LKFY+ YKQAT G C + KP +++ + K++A
Sbjct: 43 ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSKPGFWDPVGRYKWDA 102
Query: 151 WNSLGQMAKSEAMSKYIALLKEV 173
W+SLG M K EAM Y+ +K++
Sbjct: 103 WSSLGDMTKEEAMIAYVEEMKKI 125
>UNIPROTKB|P07106 [details] [associations]
symbol:ACBD5 "Acyl-CoA-binding domain-containing protein 5"
species:9913 "Bos taurus" [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008289 "lipid binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
GO:GO:0016021 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0006810
GO:GO:0005778 GO:GO:0000062 eggNOG:COG4281 HOGENOM:HOG000231479
GO:GO:0008289 InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880
EMBL:M15888 EMBL:S80107 EMBL:BC102373 IPI:IPI00711675
IPI:IPI00841629 PIR:C26448 RefSeq:NP_851381.1 UniGene:Bt.87957
ProteinModelPortal:P07106 GeneID:353160 KEGG:bta:353160 CTD:91452
HOVERGEN:HBG106445 InParanoid:P07106 NextBio:20812708
InterPro:IPR016347 PIRSF:PIRSF002412 Uniprot:P07106
Length = 533
Score = 162 (62.1 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 95 EDRFNQACDYLPSLVK----KLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNA 150
E RF A + SL K + + +LKFY+ YKQAT G C + KP +++ + K++A
Sbjct: 43 ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSKPGFWDPVGRYKWDA 102
Query: 151 WNSLGQMAKSEAMSKYIALLKEV 173
W+SLG M K EAM Y+ +K++
Sbjct: 103 WSSLGDMTKEEAMIAYVEEMKKI 125
>ZFIN|ZDB-GENE-040426-1268 [details] [associations]
symbol:msi2b "musashi homolog 2b (Drosophila)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-040426-1268 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 HSSP:Q61474 EMBL:BX000438
EMBL:BX510988 EMBL:BX649247 EMBL:CR848815 EMBL:BC055251
IPI:IPI00481779 RefSeq:NP_957403.1 UniGene:Dr.82489 SMR:Q7SXT6
STRING:Q7SXT6 Ensembl:ENSDART00000100194 GeneID:394084
KEGG:dre:394084 CTD:394084 InParanoid:Q7SXT6 OMA:NYISASP
NextBio:20815041 Uniprot:Q7SXT6
Length = 408
Score = 160 (61.4 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 33/83 (39%), Positives = 49/83 (59%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W S + L+ +FS++G+I VM D T S+GFGFVTF + +VDKV +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQ 81
Query: 70 DSHVLEGSRLSIQPSDSHNRMAE 92
H L+ +I P + R A+
Sbjct: 82 PHHELDSK--TIDPKVAFPRRAQ 102
Score = 151 (58.2 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 5 IRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVD 64
+ + KIFVG L ++K++F ++G++ +A +MFDK T +GFGFVTF+N++ V+
Sbjct: 106 VTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVE 165
Query: 65 KVFSTDSH 72
KV H
Sbjct: 166 KVCEIHFH 173
>UNIPROTKB|Q2KHT9 [details] [associations]
symbol:ACBD4 "Acyl-CoA-binding domain-containing protein 4"
species:9913 "Bos taurus" [GO:0008289 "lipid binding" evidence=IEA]
[GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062 EMBL:BC112885
IPI:IPI00699163 RefSeq:NP_001039679.1 UniGene:Bt.24821
ProteinModelPortal:Q2KHT9 PRIDE:Q2KHT9 Ensembl:ENSBTAT00000007953
GeneID:515848 KEGG:bta:515848 CTD:79777 eggNOG:COG4281
GeneTree:ENSGT00680000099745 HOGENOM:HOG000231479
HOVERGEN:HBG028530 InParanoid:Q2KHT9 OMA:WLVGTVR OrthoDB:EOG4GF3FX
NextBio:20872026 GO:GO:0008289 InterPro:IPR022408 SUPFAM:SSF47027
PROSITE:PS00880 Uniprot:Q2KHT9
Length = 303
Score = 157 (60.3 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 29/57 (50%), Positives = 42/57 (73%)
Query: 117 LLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQMAKSEAMSKYIALLKEV 173
+L+FY+ YKQAT+G C I +P +++ + K+ AWNSLGQM++ EAMS YI +K V
Sbjct: 39 MLRFYSYYKQATMGPCLIPQPGFWDPIGRYKWEAWNSLGQMSREEAMSAYITEMKLV 95
>UNIPROTKB|F1RR18 [details] [associations]
symbol:ACBD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
GeneTree:ENSGT00680000099745 OMA:WLVGTVR InterPro:IPR022408
SUPFAM:SSF47027 PROSITE:PS00880 EMBL:FP067380 RefSeq:XP_003358059.1
Ensembl:ENSSSCT00000018873 GeneID:100520929 KEGG:ssc:100520929
Uniprot:F1RR18
Length = 304
Score = 157 (60.3 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 28/57 (49%), Positives = 43/57 (75%)
Query: 117 LLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQMAKSEAMSKYIALLKEV 173
+L+FY+ YKQATVG C + +P +++ + K++AWNSLG+M++ EAMS YI +K V
Sbjct: 39 MLRFYSYYKQATVGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLV 95
>TAIR|locus:2143676 [details] [associations]
symbol:ACBP5 "acyl-CoA binding protein 5" species:3702
"Arabidopsis thaliana" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA;ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006869 "lipid transport" evidence=RCA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009416 "response to light stimulus"
evidence=TAS] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0031047 "gene silencing by RNA" evidence=RCA]
[GO:0031048 "chromatin silencing by small RNA" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR000582 InterPro:IPR011498 InterPro:IPR015915
Pfam:PF00887 Pfam:PF07646 PROSITE:PS51228 GO:GO:0005829
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006869
Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062 GO:GO:0008289
SUPFAM:SSF47027 PROSITE:PS00880 HSSP:O75521 EMBL:AC007478
EMBL:AY093156 EMBL:BT008399 IPI:IPI00548852 RefSeq:NP_198115.2
UniGene:At.49071 UniGene:At.69930 ProteinModelPortal:Q8RWD9
SMR:Q8RWD9 IntAct:Q8RWD9 STRING:Q8RWD9 PaxDb:Q8RWD9 PRIDE:Q8RWD9
EnsemblPlants:AT5G27630.1 GeneID:832825 KEGG:ath:AT5G27630
TAIR:At5g27630 eggNOG:NOG283398 HOGENOM:HOG000239625
InParanoid:Q8RWD9 OMA:DTRNTEL PhylomeDB:Q8RWD9
ProtClustDB:CLSN2690205 Genevestigator:Q8RWD9 GO:GO:0009416
Gene3D:2.120.10.80 Uniprot:Q8RWD9
Length = 648
Score = 163 (62.4 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 37/99 (37%), Positives = 54/99 (54%)
Query: 96 DRFNQACDYL-----PSLVKKLDSS----TLLKFYALYKQATVGQCNIDKPSWYNMEAKS 146
+RF A Y+ S VK+L S T L Y L++QAT+G C+I KPS +N +S
Sbjct: 15 ERFYAAASYVGLDGSQSSVKQLSSKFSNDTSLLLYTLHQQATLGPCSIPKPSAWNPVEQS 74
Query: 147 KYNAWNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQEEI 185
K+ +W LG M EAM ++ +L+E D GW + +
Sbjct: 75 KWKSWQGLGTMPSIEAMRLFVKILEEADPGWYPRTSNSV 113
>UNIPROTKB|F8W646 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1 IPI:IPI01022306
ProteinModelPortal:F8W646 SMR:F8W646 PRIDE:F8W646
Ensembl:ENST00000547708 ArrayExpress:F8W646 Bgee:F8W646
Uniprot:F8W646
Length = 156
Score = 139 (54.0 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
QL K+F+G L + + L+ F ++G + + VM D NT S+GFGFVT+ E VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 67 FSTDSHVLEGSRLSIQPSDSHNR 89
+ H ++G R+ ++P + +R
Sbjct: 72 MNARPHKVDG-RV-VEPKRAVSR 92
>UNIPROTKB|F8W6J1 [details] [associations]
symbol:ECI2 "Enoyl-CoA delta isomerase 2, mitochondrial"
species:9606 "Homo sapiens" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS51228 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880 EMBL:AL033383
HGNC:HGNC:14601 IPI:IPI00472856 ProteinModelPortal:F8W6J1
SMR:F8W6J1 Ensembl:ENST00000380120 ArrayExpress:F8W6J1 Bgee:F8W6J1
Uniprot:F8W6J1
Length = 152
Score = 139 (54.0 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 88 NRMAENMEDR-FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKS 146
NR A + F + + + L K + LK YALYKQAT G CN+ KP +++ K+
Sbjct: 32 NRTAMRASQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKA 91
Query: 147 KYNAWNSLGQMAK 159
K++AWN+LG + K
Sbjct: 92 KWDAWNALGSLPK 104
>UNIPROTKB|P60826 [details] [associations]
symbol:CIRBP "Cold-inducible RNA-binding protein"
species:10029 "Cricetulus griseus" [GO:0003730 "mRNA 3'-UTR
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0009411 "response to UV"
evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
evidence=ISS] [GO:0017148 "negative regulation of translation"
evidence=ISS] [GO:0030371 "translation repressor activity"
evidence=ISS] [GO:0034063 "stress granule assembly" evidence=ISS]
[GO:0045727 "positive regulation of translation" evidence=ISS]
[GO:0048255 "mRNA stabilization" evidence=ISS] [GO:0070181 "SSU
rRNA binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0009411 GO:GO:0005654 GO:GO:0006950 GO:GO:0000166
GO:GO:0030371 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730
GO:GO:0045727 GO:GO:0010494 GO:GO:0034063 HOVERGEN:HBG107480
GO:GO:0070181 EMBL:AY359860 RefSeq:NP_001231002.1
ProteinModelPortal:P60826 SMR:P60826 PRIDE:P60826 GeneID:100689075
CTD:1153 Uniprot:P60826
Length = 172
Score = 139 (54.0 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN-KEAVDKVFS 68
K+FVG L + + L++ FS+YGQI V+ D+ T S+GFGFVTF+N +A D + +
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 69 TDSHVLEGSRLSIQPS--DSHNR 89
+ ++G ++ + + S NR
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>MGI|MGI:893588 [details] [associations]
symbol:Cirbp "cold inducible RNA binding protein"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006950 "response to
stress" evidence=IEA] [GO:0009411 "response to UV" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IDA] [GO:0030371
"translation repressor activity" evidence=IDA] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0045727 "positive regulation of
translation" evidence=ISO] [GO:0048255 "mRNA stabilization"
evidence=ISO] [GO:0070181 "SSU rRNA binding" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:893588 GO:GO:0005634 GO:GO:0009411
GO:GO:0005654 GO:GO:0000166 GO:GO:0030371 GO:GO:0009409
Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
GO:GO:0010494 GO:GO:0034063 eggNOG:COG0724 HOVERGEN:HBG107480
GO:GO:0070181 KO:K13195 CTD:1153 HOGENOM:HOG000276232 OMA:ENRSRGY
OrthoDB:EOG4HHP40 ChiTaRS:CIRBP EMBL:D78135 EMBL:AK014655
EMBL:AK132584 EMBL:BC075699 IPI:IPI00121073 RefSeq:NP_031731.1
UniGene:Mm.17898 ProteinModelPortal:P60824 SMR:P60824 STRING:P60824
PhosphoSite:P60824 PaxDb:P60824 PRIDE:P60824
Ensembl:ENSMUST00000105365 GeneID:12696 KEGG:mmu:12696
UCSC:uc007gce.1 GeneTree:ENSGT00700000104309 InParanoid:P60824
NextBio:281950 Bgee:P60824 CleanEx:MM_CIRBP Genevestigator:P60824
GermOnline:ENSMUSG00000045193 Uniprot:P60824
Length = 172
Score = 139 (54.0 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN-KEAVDKVFS 68
K+FVG L + + L++ FS+YGQI V+ D+ T S+GFGFVTF+N +A D + +
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 69 TDSHVLEGSRLSIQPS--DSHNR 89
+ ++G ++ + + S NR
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>RGD|620756 [details] [associations]
symbol:Cirbp "cold inducible RNA binding protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=ISO;ISS] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009411 "response to UV" evidence=ISO;ISS]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO;ISS]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030371 "translation repressor activity" evidence=ISO;ISS]
[GO:0034063 "stress granule assembly" evidence=ISO;ISS] [GO:0045727
"positive regulation of translation" evidence=ISO;ISS] [GO:0048255
"mRNA stabilization" evidence=ISO;ISS] [GO:0070181 "SSU rRNA
binding" evidence=ISO;ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:620756 GO:GO:0005634
GO:GO:0009411 GO:GO:0005654 GO:GO:0000166 GO:GO:0030371
GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730
GO:GO:0045727 GO:GO:0010494 GO:GO:0034063 eggNOG:COG0724
HOVERGEN:HBG107480 GO:GO:0070181 HOGENOM:HOG000276232
OrthoDB:EOG4HHP40 GeneTree:ENSGT00700000104309 EMBL:AB000362
IPI:IPI00201031 UniGene:Rn.28931 ProteinModelPortal:P60825
SMR:P60825 IntAct:P60825 STRING:P60825 PRIDE:P60825
Ensembl:ENSRNOT00000021648 UCSC:RGD:620756 InParanoid:P60825
Genevestigator:P60825 GermOnline:ENSRNOG00000015999 Uniprot:P60825
Length = 172
Score = 139 (54.0 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN-KEAVDKVFS 68
K+FVG L + + L++ FS+YGQI V+ D+ T S+GFGFVTF+N +A D + +
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 69 TDSHVLEGSRLSIQPS--DSHNR 89
+ ++G ++ + + S NR
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>TAIR|locus:2077427 [details] [associations]
symbol:AT3G08000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC013483 eggNOG:COG0724
HOGENOM:HOG000276232 HSSP:Q14103 UniGene:At.40270 UniGene:At.28103
EMBL:BT012118 EMBL:BT012373 IPI:IPI00520412 RefSeq:NP_187457.1
ProteinModelPortal:Q9SFB4 SMR:Q9SFB4 EnsemblPlants:AT3G08000.1
GeneID:819991 KEGG:ath:AT3G08000 TAIR:At3g08000 InParanoid:Q9SFB4
OMA:FCTSSSA PhylomeDB:Q9SFB4 ProtClustDB:CLSN2915579
Genevestigator:Q9SFB4 Uniprot:Q9SFB4
Length = 143
Score = 139 (54.0 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 29/81 (35%), Positives = 45/81 (55%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNK- 60
S+S +K+F+G L W+V LK FS +G++ + +DK +G S+GFGFV F +
Sbjct: 34 SSSASPSSKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEG 93
Query: 61 EAVDKVFSTDSHVLEGSRLSI 81
+A+ + D L G L I
Sbjct: 94 DALSAKDAMDGKGLLGRPLRI 114
>TAIR|locus:2119505 [details] [associations]
symbol:AT4G13860 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HSSP:P19339 HOGENOM:HOG000276232
UniGene:At.33330 EMBL:BT014844 IPI:IPI00523584 RefSeq:NP_193122.2
ProteinModelPortal:Q6ID29 SMR:Q6ID29 PRIDE:Q6ID29
EnsemblPlants:AT4G13860.1 GeneID:827020 KEGG:ath:AT4G13860
TAIR:At4g13860 InParanoid:Q6ID29 OMA:KIEEMFL PhylomeDB:Q6ID29
Genevestigator:Q6ID29 Uniprot:Q6ID29
Length = 87
Score = 139 (54.0 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 30/74 (40%), Positives = 47/74 (63%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN-KEAVDKVFS 68
+++VGNL T + + L++ FS YG +++A VM D+ T S+GFGFVT+ + EA V
Sbjct: 4 RVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSG 63
Query: 69 TDSHVLEGSRLSIQ 82
D L G R+S++
Sbjct: 64 MDGKELNGRRVSVK 77
>ZFIN|ZDB-GENE-030131-6154 [details] [associations]
symbol:hnrnpa0b "heterogeneous nuclear
ribonucleoprotein A0b" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-6154
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12894
EMBL:BC066434 IPI:IPI00507638 RefSeq:NP_999871.1 UniGene:Dr.35374
ProteinModelPortal:Q6NYW8 SMR:Q6NYW8 STRING:Q6NYW8 PRIDE:Q6NYW8
GeneID:334222 KEGG:dre:334222 CTD:334222 InParanoid:Q6NYW8
OrthoDB:EOG4M65KN NextBio:20810313 ArrayExpress:Q6NYW8 Bgee:Q6NYW8
Uniprot:Q6NYW8
Length = 314
Score = 157 (60.3 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 27/79 (34%), Positives = 50/79 (63%)
Query: 4 SIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAV 63
++ ++ KIFVG L + +L +FFS++G I + V+ DK+TG +GFGFV F++ ++
Sbjct: 94 ALAKVKKIFVGGLKDDIEEKDLTEFFSQFGMIEKSEVITDKDTGKKRGFGFVHFEDNDSA 153
Query: 64 DKVFSTDSHVLEGSRLSIQ 82
DK H++ G ++ ++
Sbjct: 154 DKAVVLKFHMINGHKVEVK 172
Score = 115 (45.5 bits), Expect = 0.00043, P = 0.00043
Identities = 21/80 (26%), Positives = 44/80 (55%)
Query: 3 NSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEA 62
+ + +L K+FVG L +++ L+ +F ++G + + V+ + S+ FGFVT+ E
Sbjct: 2 SEMEKLCKLFVGGLNVQTTNDGLRSYFEQFGNLTDCVVVQNDQLQRSRCFGFVTYSTSEE 61
Query: 63 VDKVFSTDSHVLEGSRLSIQ 82
D + HV++G + ++
Sbjct: 62 ADAAMAARPHVVDGKNVEVK 81
>FB|FBgn0250836 [details] [associations]
symbol:CG8628 species:7227 "Drosophila melanogaster"
[GO:0000062 "fatty-acyl-CoA binding" evidence=ISS] [GO:0042049
"cellular acyl-CoA homeostasis" evidence=ISS] [GO:0004857 "enzyme
inhibitor activity" evidence=ISS] [GO:0050809 "diazepam binding"
evidence=ISS] InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS51228 EMBL:AE014296 Gene3D:1.20.80.10 InterPro:IPR014352
GO:GO:0000062 GeneTree:ENSGT00680000099745 InterPro:IPR022408
SUPFAM:SSF47027 PROSITE:PS00880 HSSP:P07107 RefSeq:NP_001163366.1
RefSeq:NP_648083.1 UniGene:Dm.23638 SMR:Q9VS22 STRING:Q9VS22
EnsemblMetazoa:FBtr0076914 EnsemblMetazoa:FBtr0301218 GeneID:38783
KEGG:dme:Dmel_CG8628 UCSC:CG8628-RA FlyBase:FBgn0250836
InParanoid:Q9VS22 OMA:AMSDYIV OrthoDB:EOG4JWSX6 GenomeRNAi:38783
NextBio:810356 Uniprot:Q9VS22
Length = 84
Score = 138 (53.6 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 98 FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQM 157
F +A + KK + L+FY L+KQATVG NI+KP ++ K+KY AW+S +
Sbjct: 4 FEEATELANKFTKKPTDAEFLEFYGLFKQATVGDVNIEKPGALALKDKAKYEAWSSNKGL 63
Query: 158 AKSEAMSKYIALLKE 172
+K A Y+ + ++
Sbjct: 64 SKEAAKEAYVKVYEK 78
>TAIR|locus:2164082 [details] [associations]
symbol:AT5G53720 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000276232 EMBL:AB017066
HSSP:Q61474 IPI:IPI00526229 RefSeq:NP_200183.1 UniGene:At.55532
ProteinModelPortal:Q9FI04 SMR:Q9FI04 EnsemblPlants:AT5G53720.1
GeneID:835453 KEGG:ath:AT5G53720 TAIR:At5g53720 eggNOG:NOG297705
InParanoid:Q9FI04 OMA:ATRACEN PhylomeDB:Q9FI04
ProtClustDB:CLSN2916326 Genevestigator:Q9FI04 Uniprot:Q9FI04
Length = 100
Score = 138 (53.6 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 1 MSNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNK 60
MS+ + KI+V LPW L +F +G+I+ A V+ D T SKGFGFVTF+
Sbjct: 1 MSHPNDRETKIYVAGLPWITRTEGLISYFERFGEIVYAKVVCDGATQRSKGFGFVTFREV 60
Query: 61 EAVDKVFSTDSHVLEG 76
E+ + +H ++G
Sbjct: 61 ESATRACENPNHTIDG 76
>FB|FBgn0004838 [details] [associations]
symbol:Hrb27C "Heterogeneous nuclear ribonucleoprotein at
27C" species:7227 "Drosophila melanogaster" [GO:0030529
"ribonucleoprotein complex" evidence=ISS;NAS;IDA;IPI] [GO:0005730
"nucleolus" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS;NAS]
[GO:0048027 "mRNA 5'-UTR binding" evidence=NAS;TAS] [GO:0007319
"negative regulation of oskar mRNA translation" evidence=TAS]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA;TAS] [GO:0007317
"regulation of pole plasm oskar mRNA localization" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0045451 "pole
plasm oskar mRNA localization" evidence=IMP] [GO:0048024
"regulation of mRNA splicing, via spliceosome" evidence=IMP]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0045727 "positive regulation of translation" evidence=IDA]
[GO:0043234 "protein complex" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0007411 GO:GO:0043234 GO:GO:0005654
EMBL:AE014134 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0007298
GO:GO:0048027 GO:GO:0003730 GO:GO:0003697 GO:GO:0030529
GO:GO:0046331 GO:GO:0045727 GO:GO:0048024 GO:GO:0007319
eggNOG:COG0724 GO:GO:0045451 KO:K14411 GeneTree:ENSGT00700000104255
EMBL:X62639 EMBL:DQ062784 EMBL:AY069699 EMBL:AY128430 EMBL:S51720
PIR:D41732 RefSeq:NP_001162897.1 RefSeq:NP_001162898.1
RefSeq:NP_001245917.1 RefSeq:NP_001245918.1 RefSeq:NP_001245919.1
RefSeq:NP_476869.1 RefSeq:NP_723228.1 RefSeq:NP_723229.1
UniGene:Dm.1997 ProteinModelPortal:P48809 SMR:P48809 IntAct:P48809
MINT:MINT-939547 STRING:P48809 PaxDb:P48809
EnsemblMetazoa:FBtr0079346 EnsemblMetazoa:FBtr0079347
EnsemblMetazoa:FBtr0079348 EnsemblMetazoa:FBtr0301403
EnsemblMetazoa:FBtr0301404 EnsemblMetazoa:FBtr0307030
EnsemblMetazoa:FBtr0307031 EnsemblMetazoa:FBtr0307032 GeneID:33968
KEGG:dme:Dmel_CG10377 CTD:33968 FlyBase:FBgn0004838
InParanoid:P48809 OMA:GGYDMYN OrthoDB:EOG4CJSZQ PhylomeDB:P48809
ChiTaRS:Hrb27C GenomeRNAi:33968 NextBio:786189 Bgee:P48809
GermOnline:CG10377 Uniprot:P48809
Length = 421
Score = 159 (61.0 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 34/120 (28%), Positives = 54/120 (45%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L W + L ++F +G I++ VM + +G S+GFGFVTF + V+ V
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 70 DSHVLEGSRLSIQPSDSHNRMAENMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATV 129
H L+G + +P + + LPS V + D T Y + +
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVI 127
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 24/77 (31%), Positives = 51/77 (66%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G LP V+ +L+ FF+ YG++ +M+D+ S+GFGF++F+ + +V+ V +
Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHV-TN 155
Query: 70 DSHV-LEGSRLSIQPSD 85
+ ++ L G ++ I+ ++
Sbjct: 156 ERYINLNGKQVEIKKAE 172
>UNIPROTKB|Q8NC06 [details] [associations]
symbol:ACBD4 "Acyl-CoA-binding domain-containing protein 4"
species:9606 "Homo sapiens" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA]
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062 CTD:79777
eggNOG:COG4281 HOGENOM:HOG000231479 HOVERGEN:HBG028530
GO:GO:0008289 InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880
EMBL:AB073387 EMBL:AK023384 EMBL:AK075104 EMBL:CH471178
EMBL:BC029164 EMBL:BC041143 IPI:IPI00216847 IPI:IPI00419689
IPI:IPI00604619 RefSeq:NP_001129176.1 RefSeq:NP_001129177.1
RefSeq:NP_001129178.1 RefSeq:NP_001129179.1 RefSeq:NP_078998.1
UniGene:Hs.110298 PDB:2WH5 PDBsum:2WH5 ProteinModelPortal:Q8NC06
SMR:Q8NC06 PhosphoSite:Q8NC06 DMDM:67460567 PaxDb:Q8NC06
PRIDE:Q8NC06 DNASU:79777 Ensembl:ENST00000321854
Ensembl:ENST00000376955 Ensembl:ENST00000398322
Ensembl:ENST00000431281 GeneID:79777 KEGG:hsa:79777 UCSC:uc002iic.3
UCSC:uc002iid.2 UCSC:uc002iie.3 GeneCards:GC17P043209
HGNC:HGNC:23337 HPA:HPA051772 neXtProt:NX_Q8NC06
PharmGKB:PA134897893 OMA:IPWSSWS EvolutionaryTrace:Q8NC06
GenomeRNAi:79777 NextBio:69267 Bgee:Q8NC06 CleanEx:HS_ACBD4
Genevestigator:Q8NC06 GermOnline:ENSG00000181513 Uniprot:Q8NC06
Length = 268
Score = 154 (59.3 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 27/57 (47%), Positives = 43/57 (75%)
Query: 117 LLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQMAKSEAMSKYIALLKEV 173
+L+FY+ YKQAT+G C + +P +++ + K++AWNSLG+M++ EAMS YI +K V
Sbjct: 39 MLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLV 95
>UNIPROTKB|F1NM57 [details] [associations]
symbol:ACBD5 "Acyl-CoA-binding domain-containing protein 5"
species:9031 "Gallus gallus" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS51228 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
GeneTree:ENSGT00680000099745 InterPro:IPR022408 SUPFAM:SSF47027
PROSITE:PS00880 InterPro:IPR016347 PIRSF:PIRSF002412
IPI:IPI00595883 OMA:GRGHRMQ EMBL:AADN02000550
Ensembl:ENSGALT00000012158 ArrayExpress:F1NM57 Uniprot:F1NM57
Length = 492
Score = 160 (61.4 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 47/154 (30%), Positives = 78/154 (50%)
Query: 97 RFNQACDYLPSLVK----KLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWN 152
RF A + SL K + + +LKFY+ YKQAT G CNI +P +++ + K++AW+
Sbjct: 11 RFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATQGPCNIPRPGFWDPIGRYKWDAWS 70
Query: 153 SLGQMAKSEAMSKYIALLKEV--DAGWEDKEQE---------EINWDWKPNQKAMSKYIA 201
+LG M+K EAM Y+ +K++ DK +E EI D K ++ ++
Sbjct: 71 ALGDMSKEEAMIAYVEEMKKILESMPMTDKVEELLQVIGPFYEIVEDKKNRGSGLTSDLS 130
Query: 202 -LLNEVD--ASWEDKEQEEINWDESQESGSKENE 232
++N + K + + ES+E G +E E
Sbjct: 131 NVMNSTPNIKAVNGKAESSDSGAESEEEGLREEE 164
>UNIPROTKB|Q5ZHQ6 [details] [associations]
symbol:ACBD5 "Acyl-CoA-binding domain-containing protein 5"
species:9031 "Gallus gallus" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
GO:GO:0016021 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0006810
GO:GO:0005778 GO:GO:0000062 eggNOG:COG4281 HOGENOM:HOG000231479
GO:GO:0008289 InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880
CTD:91452 HOVERGEN:HBG106445 InterPro:IPR016347 PIRSF:PIRSF002412
EMBL:AJ721078 IPI:IPI00595883 RefSeq:NP_001006356.1
UniGene:Gga.5672 HSSP:O75521 ProteinModelPortal:Q5ZHQ6
STRING:Q5ZHQ6 GeneID:420488 KEGG:gga:420488 OrthoDB:EOG4J3WGS
NextBio:20823387 Uniprot:Q5ZHQ6
Length = 492
Score = 160 (61.4 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 47/154 (30%), Positives = 78/154 (50%)
Query: 97 RFNQACDYLPSLVK----KLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWN 152
RF A + SL K + + +LKFY+ YKQAT G CNI +P +++ + K++AW+
Sbjct: 11 RFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATQGPCNIPRPGFWDPIGRYKWDAWS 70
Query: 153 SLGQMAKSEAMSKYIALLKEV--DAGWEDKEQE---------EINWDWKPNQKAMSKYIA 201
+LG M+K EAM Y+ +K++ DK +E EI D K ++ ++
Sbjct: 71 ALGDMSKEEAMIAYVEEMKKILESMPMTDKVEELLQVIGPFYEIVEDKKNRGSGLTSDLS 130
Query: 202 -LLNEVD--ASWEDKEQEEINWDESQESGSKENE 232
++N + K + + ES+E G +E E
Sbjct: 131 NVMNSTPNIKAVNGKAESSDSGAESEEEGLREEE 164
>UNIPROTKB|K7EM05 [details] [associations]
symbol:ACBD4 "Acyl-Coenzyme A binding domain containing 4,
isoform CRA_b" species:9606 "Homo sapiens" [GO:0000062
"fatty-acyl-CoA binding" evidence=IEA] InterPro:IPR000582
Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228 Gene3D:1.20.80.10
InterPro:IPR014352 InterPro:IPR022408 SUPFAM:SSF47027
PROSITE:PS00880 EMBL:CH471178 HGNC:HGNC:23337 EMBL:AC142472
Ensembl:ENST00000592162 Uniprot:K7EM05
Length = 269
Score = 154 (59.3 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 27/57 (47%), Positives = 43/57 (75%)
Query: 117 LLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQMAKSEAMSKYIALLKEV 173
+L+FY+ YKQAT+G C + +P +++ + K++AWNSLG+M++ EAMS YI +K V
Sbjct: 39 MLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLV 95
>UNIPROTKB|F1NM58 [details] [associations]
symbol:ACBD5 "Acyl-CoA-binding domain-containing protein 5"
species:9031 "Gallus gallus" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] InterPro:IPR000582 Pfam:PF00887
PRINTS:PR00689 PROSITE:PS51228 GO:GO:0043231 Gene3D:1.20.80.10
InterPro:IPR014352 GO:GO:0000062 GeneTree:ENSGT00680000099745
InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880
InterPro:IPR016347 PIRSF:PIRSF002412 EMBL:AADN02000550
IPI:IPI00591324 Ensembl:ENSGALT00000012157 ArrayExpress:F1NM58
Uniprot:F1NM58
Length = 493
Score = 160 (61.4 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 47/154 (30%), Positives = 78/154 (50%)
Query: 97 RFNQACDYLPSLVK----KLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWN 152
RF A + SL K + + +LKFY+ YKQAT G CNI +P +++ + K++AW+
Sbjct: 12 RFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATQGPCNIPRPGFWDPIGRYKWDAWS 71
Query: 153 SLGQMAKSEAMSKYIALLKEV--DAGWEDKEQE---------EINWDWKPNQKAMSKYIA 201
+LG M+K EAM Y+ +K++ DK +E EI D K ++ ++
Sbjct: 72 ALGDMSKEEAMIAYVEEMKKILESMPMTDKVEELLQVIGPFYEIVEDKKNRGSGLTSDLS 131
Query: 202 -LLNEVD--ASWEDKEQEEINWDESQESGSKENE 232
++N + K + + ES+E G +E E
Sbjct: 132 NVMNSTPNIKAVNGKAESSDSGAESEEEGLREEE 165
>RGD|1563684 [details] [associations]
symbol:Hnrnpa0 "heterogeneous nuclear ribonucleoprotein A0"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0006954 "inflammatory response" evidence=ISO]
[GO:0017091 "AU-rich element binding" evidence=ISO] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0032496 "response to
lipopolysaccharide" evidence=ISO] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
REFSEQ:XM_003752953 Ncbi:XP_003753001
Length = 226
Score = 150 (57.9 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
++ K+FVG L V+ +L + FS++G + A ++ DK +G +GFGFV FQ+ +A DK
Sbjct: 15 KVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKA 74
Query: 67 FSTDSHVLEGSRLSIQ 82
H ++G R+ ++
Sbjct: 75 AVVKFHPIQGHRVEVK 90
>TAIR|locus:2006998 [details] [associations]
symbol:AT1G33470 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOGENOM:HOG000276232 EMBL:AK176398 IPI:IPI00533784
RefSeq:NP_174613.2 UniGene:At.17522 UniGene:At.67846
ProteinModelPortal:Q67YS0 SMR:Q67YS0 PaxDb:Q67YS0 PRIDE:Q67YS0
EnsemblPlants:AT1G33470.1 GeneID:840240 KEGG:ath:AT1G33470
TAIR:At1g33470 InParanoid:Q67YS0 OMA:GAQYPFY PhylomeDB:Q67YS0
ProtClustDB:CLSN2680737 ArrayExpress:Q67YS0 Genevestigator:Q67YS0
Uniprot:Q67YS0
Length = 245
Score = 152 (58.6 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 29/69 (42%), Positives = 43/69 (62%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L W L+ +F ++G I+ A V+ DK++G SKG+GFVTF + EA K
Sbjct: 8 KVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQKACVD 67
Query: 70 DSHVLEGSR 78
+ V++G R
Sbjct: 68 PAPVIDGRR 76
>RGD|1309411 [details] [associations]
symbol:Acbd5 "acyl-CoA binding domain containing 5"
species:10116 "Rattus norvegicus" [GO:0000062 "fatty-acyl-CoA
binding" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] InterPro:IPR000582 Pfam:PF00887
PRINTS:PR00689 PROSITE:PS51228 RGD:1309411 GO:GO:0016021
Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0006810 GO:GO:0005778
GO:GO:0000062 eggNOG:COG4281 HOGENOM:HOG000231479 GO:GO:0008289
InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880 CTD:91452
HOVERGEN:HBG106445 InterPro:IPR016347 PIRSF:PIRSF002412
EMBL:EF026991 EMBL:EF026992 EMBL:BC101874 IPI:IPI00768827
IPI:IPI00845863 IPI:IPI00845886 RefSeq:NP_001071103.1
UniGene:Rn.230065 ProteinModelPortal:A0FKI7 STRING:A0FKI7
PRIDE:A0FKI7 Ensembl:ENSRNOT00000023753 GeneID:307170
KEGG:rno:307170 UCSC:RGD:1309411 InParanoid:A0FKI7 NextBio:657038
ArrayExpress:A0FKI7 Genevestigator:A0FKI7 Uniprot:A0FKI7
Length = 506
Score = 160 (61.4 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 53/179 (29%), Positives = 85/179 (47%)
Query: 95 EDRFNQACDYLPSLVK----KLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNA 150
E RF A + SL K + + +L+FY+ YKQAT G C + +P +++ + K++A
Sbjct: 45 ETRFEAAVKVIQSLPKNGSFQPTNEMMLRFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 104
Query: 151 WNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQ-EEINWDWKP-----NQKAMSKYIALLN 204
W+SLG M K EAM Y+ +K++ E+ EE+ P K SK L +
Sbjct: 105 WSSLGDMTKEEAMIAYVEEMKKIIETMPMTEKVEELLHVIGPFYEIVEDKKNSKSSDLTS 164
Query: 205 EVDASWEDKEQEEINWD-ESQESG--SKENEGQT--KGWVNVSSMINDESQLDDNEKNI 258
++ + +N ES +SG S+E E Q KG S + + +KN+
Sbjct: 165 DLGNVLTSSNAKAVNGKAESSDSGAESEEEEAQEELKG-AEQSGSDDKKMMTKSTDKNL 222
>UNIPROTKB|F1LRH5 [details] [associations]
symbol:Acbd5 "Acyl-CoA-binding domain-containing protein 5"
species:10116 "Rattus norvegicus" [GO:0000062 "fatty-acyl-CoA
binding" evidence=IEA] InterPro:IPR000582 Pfam:PF00887
PRINTS:PR00689 PROSITE:PS51228 RGD:1309411 GO:GO:0043231
Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
GeneTree:ENSGT00680000099745 InterPro:IPR022408 SUPFAM:SSF47027
PROSITE:PS00880 InterPro:IPR016347 PIRSF:PIRSF002412
IPI:IPI00768827 Ensembl:ENSRNOT00000066061 ArrayExpress:F1LRH5
Uniprot:F1LRH5
Length = 513
Score = 160 (61.4 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 53/179 (29%), Positives = 85/179 (47%)
Query: 95 EDRFNQACDYLPSLVK----KLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNA 150
E RF A + SL K + + +L+FY+ YKQAT G C + +P +++ + K++A
Sbjct: 51 ETRFEAAVKVIQSLPKNGSFQPTNEMMLRFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 110
Query: 151 WNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQ-EEINWDWKP-----NQKAMSKYIALLN 204
W+SLG M K EAM Y+ +K++ E+ EE+ P K SK L +
Sbjct: 111 WSSLGDMTKEEAMIAYVEEMKKIIETMPMTEKVEELLHVIGPFYEIVEDKKNSKSSDLTS 170
Query: 205 EVDASWEDKEQEEINWD-ESQESG--SKENEGQT--KGWVNVSSMINDESQLDDNEKNI 258
++ + +N ES +SG S+E E Q KG S + + +KN+
Sbjct: 171 DLGNVLTSSNAKAVNGKAESSDSGAESEEEEAQEELKG-AEQSGSDDKKMMTKSTDKNL 228
>ZFIN|ZDB-GENE-040426-2717 [details] [associations]
symbol:hnrpdl "heterogeneous nuclear
ribonucleoprotein D-like" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-040426-2717
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103
CTD:9987 GeneTree:ENSGT00700000104347 KO:K13044 OMA:QHPPADN
OrthoDB:EOG49W2FZ EMBL:CR847788 EMBL:BC055525 IPI:IPI00500216
RefSeq:NP_998557.1 UniGene:Dr.75234 SMR:Q7SXN2 STRING:Q7SXN2
Ensembl:ENSDART00000020631 GeneID:406701 KEGG:dre:406701
InParanoid:Q7SXN2 NextBio:20818224 Uniprot:Q7SXN2
Length = 296
Score = 155 (59.6 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W S +L + S +G++++ ++ D TG S+GFGFV F++ E+VD+V
Sbjct: 31 KMFIGGLSWDTSKKDLTDYLSRFGEVLDCTIKTDPLTGRSRGFGFVLFKDAESVDRVLEL 90
Query: 70 DSHVLEG 76
H L+G
Sbjct: 91 TEHKLDG 97
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 28/92 (30%), Positives = 47/92 (51%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L ++ +L+++F YG+I + + D T +GF FVTF +E V K+
Sbjct: 116 KVFVGGLSPDITEEQLREYFGVYGEIESIELPTDTKTNERRGFCFVTFALEEPVQKLLEN 175
Query: 70 DSHVLEGSRLSI---QPSDSHNRMAENMEDRF 98
H + + I QP + + R +N + F
Sbjct: 176 RYHQIGSGKCEIKVAQPKEVY-RQQQNRDRGF 206
>FB|FBgn0031478 [details] [associations]
symbol:CG8814 species:7227 "Drosophila melanogaster"
[GO:0042049 "cellular acyl-CoA homeostasis" evidence=ISS]
[GO:0050809 "diazepam binding" evidence=ISS] [GO:0004857 "enzyme
inhibitor activity" evidence=ISS] [GO:0000062 "fatty-acyl-CoA
binding" evidence=ISS] InterPro:IPR000582 Pfam:PF00887
PRINTS:PR00689 PROSITE:PS51228 EMBL:AE014134 Gene3D:1.20.80.10
InterPro:IPR014352 GO:GO:0000062 eggNOG:COG4281
GeneTree:ENSGT00680000099745 SUPFAM:SSF47027 HSSP:P07107
EMBL:AY051731 RefSeq:NP_608729.1 UniGene:Dm.30760 SMR:Q9VQI6
IntAct:Q9VQI6 MINT:MINT-295476 EnsemblMetazoa:FBtr0077629
GeneID:33492 KEGG:dme:Dmel_CG8814 UCSC:CG8814-RA
FlyBase:FBgn0031478 InParanoid:Q9VQI6 OMA:NGPYQPS OrthoDB:EOG444J21
GenomeRNAi:33492 NextBio:783860 Uniprot:Q9VQI6
Length = 324
Score = 156 (60.0 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 32/85 (37%), Positives = 54/85 (63%)
Query: 94 MEDRFNQACDYLPSLVK----KLDSSTLLKFYALYKQATVGQCNIDK-PSWYNMEAKSKY 148
+E+RF A + + L K + +S +LKFY L+KQAT G+ ++DK P ++++ K+K+
Sbjct: 4 IEERFQAAVNVIKGLPKNGPYQPSTSMMLKFYGLFKQATEGRPDVDKKPGFWDIVGKAKW 63
Query: 149 NAWNSLGQMAKSEAMSKYIALLKEV 173
AWN + K EAM +Y+ L+E+
Sbjct: 64 QAWNDNRHLTKEEAMQRYVESLQEI 88
>FB|FBgn0011666 [details] [associations]
symbol:msi "musashi" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IDA] [GO:0022416 "chaeta
development" evidence=IMP] [GO:0003723 "RNA binding" evidence=ISM]
[GO:0003729 "mRNA binding" evidence=ISS;NAS;TAS] [GO:0006397 "mRNA
processing" evidence=ISS] [GO:0017148 "negative regulation of
translation" evidence=IMP;TAS] [GO:0006417 "regulation of
translation" evidence=TAS] [GO:0045182 "translation regulator
activity" evidence=TAS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001709 "cell fate determination" evidence=TAS]
[GO:0000900 "translation repressor activity, nucleic acid binding"
evidence=TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0042078 "germ-line stem cell division" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:AE014297 GO:GO:0005634 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0071456 GO:GO:0022416
GO:GO:0001709 GO:GO:0019827 GO:GO:0000900 GO:GO:0042078 KO:K14411
GeneTree:ENSGT00700000104255 HSSP:Q61474 ChiTaRS:msi
FlyBase:FBgn0011666 EMBL:BT133366 RefSeq:NP_001247303.1
RefSeq:NP_733108.2 UniGene:Dm.1334 SMR:Q8IMS8 MINT:MINT-296706
STRING:Q8IMS8 EnsemblMetazoa:FBtr0084881 EnsemblMetazoa:FBtr0305218
EnsemblMetazoa:FBtr0333664 GeneID:43087 KEGG:dme:Dmel_CG5099
UCSC:CG5099-RB CTD:43087 InParanoid:Q8IMS8 OMA:PIKAFAC
GenomeRNAi:43087 NextBio:832139 Uniprot:Q8IMS8
Length = 634
Score = 161 (61.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L W S ++LK++F+ +G + + +M D T S+GFGF+TFQ V+KV
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263
Query: 70 DSHVLEGSRLSIQPSDSHNR 89
H L+G ++ + + NR
Sbjct: 264 PIHTLDGKKIDPKHATPKNR 283
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 3 NSIRQLNK---IFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN 59
N RQ NK IFVG + S E+K +FS++G + ++ D+ T +GFGFVTF+N
Sbjct: 282 NRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFEN 341
Query: 60 KEAVDKVFSTDSHVLEGSRLSI---QPSDSHNRMAENMEDR 97
++ VD+V H ++ ++ QP ++ A+ ++ R
Sbjct: 342 EDVVDRVCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKR 382
>UNIPROTKB|Q13151 [details] [associations]
symbol:HNRNPA0 "Heterogeneous nuclear ribonucleoprotein A0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0017091
"AU-rich element binding" evidence=IDA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=ISS;TAS] [GO:0006954
"inflammatory response" evidence=ISS] [GO:0032496 "response to
lipopolysaccharide" evidence=ISS] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_71 InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005654 EMBL:CH471062 GO:GO:0000166 GO:GO:0032496
GO:GO:0006954 Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0017091
GO:GO:0030529 GO:GO:0000398 eggNOG:COG0724 GO:GO:0070935
HOVERGEN:HBG002295 HOGENOM:HOG000234442 EMBL:U23803 EMBL:CR456986
EMBL:BC001008 EMBL:BC007271 EMBL:BC009284 EMBL:BC011972
EMBL:BC012980 EMBL:BC018949 EMBL:BC019271 EMBL:BC028976
EMBL:BC030249 IPI:IPI00011913 RefSeq:NP_006796.1 UniGene:Hs.645902
UniGene:Hs.96996 ProteinModelPortal:Q13151 SMR:Q13151 IntAct:Q13151
MINT:MINT-5001237 STRING:Q13151 PhosphoSite:Q13151 DMDM:8134660
REPRODUCTION-2DPAGE:Q13151 SWISS-2DPAGE:Q13151 PaxDb:Q13151
PeptideAtlas:Q13151 PRIDE:Q13151 DNASU:10949
Ensembl:ENST00000314940 GeneID:10949 KEGG:hsa:10949 UCSC:uc003lbt.3
CTD:10949 GeneCards:GC05M137114 HGNC:HGNC:5030 HPA:HPA036569
MIM:609409 neXtProt:NX_Q13151 PharmGKB:PA162391106
InParanoid:Q13151 KO:K12894 OMA:GPMKQNL OrthoDB:EOG4W6NX4
PhylomeDB:Q13151 GenomeRNAi:10949 NextBio:41601 Bgee:Q13151
CleanEx:HS_HNRNPA0 Genevestigator:Q13151 GermOnline:ENSG00000177733
Uniprot:Q13151
Length = 305
Score = 155 (59.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
++ K+FVG L V+ +L + FS++G + A ++ DK +G +GFGFV FQN +A DK
Sbjct: 96 KVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKA 155
Query: 67 FSTDSHVLEGSRLSIQ 82
H ++G R+ ++
Sbjct: 156 AVVKFHPIQGHRVEVK 171
Score = 122 (48.0 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 28/91 (30%), Positives = 47/91 (51%)
Query: 1 MSNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNK 60
M NS QL K+F+G L S + L+ F +G + + V+ + T S+ FGFVT+ N
Sbjct: 1 MENS--QLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNV 58
Query: 61 EAVDKVFSTDSHVLEGSRLSIQPSDSHNRMA 91
E D + H ++G+ + ++ + S A
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSA 89
>UNIPROTKB|J3KQA8 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
ProteinModelPortal:J3KQA8 Ensembl:ENST00000420780 Uniprot:J3KQA8
Length = 102
Score = 137 (53.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
QL K+F+G L + + L+ F ++G + + VM D NT S+GFGFVT+ E VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 67 FSTDSHVLEG 76
+ H ++G
Sbjct: 72 MNARPHKVDG 81
>UNIPROTKB|Q28IQ9 [details] [associations]
symbol:cirbp "Cold-inducible RNA-binding protein"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0003729 "mRNA
binding" evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0007369 "gastrulation" evidence=ISS]
[GO:0009409 "response to cold" evidence=ISS] [GO:0009790 "embryo
development" evidence=ISS] [GO:0016477 "cell migration"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0022008 "neurogenesis" evidence=ISS] [GO:0045727 "positive
regulation of translation" evidence=ISS] [GO:0048255 "mRNA
stabilization" evidence=ISS] [GO:0048793 "pronephros development"
evidence=ISS] [GO:0060212 "negative regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISS]
[GO:0005840 "ribosome" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0005654 GO:GO:0016477
GO:GO:0022008 GO:GO:0000166 GO:GO:0009409 Gene3D:3.30.70.330
GO:GO:0019899 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
GO:GO:0007369 eggNOG:COG0724 GO:GO:0048793 HOVERGEN:HBG107480
GO:GO:0060212 KO:K13195 CTD:1153 HOGENOM:HOG000276232 EMBL:CR760272
RefSeq:NP_001017228.1 UniGene:Str.47654 ProteinModelPortal:Q28IQ9
SMR:Q28IQ9 STRING:Q28IQ9 GeneID:549982 KEGG:xtr:549982
Xenbase:XB-GENE-492781 Uniprot:Q28IQ9
Length = 166
Score = 137 (53.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE-AVDKVFS 68
K+FVG L + + L++ FS+YGQ+ V+ D+ + S+GFGFVTF+N E A D + +
Sbjct: 7 KLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMA 66
Query: 69 TDSHVLEGSRLSI-QPSDSHN 88
+ ++G ++ + Q S N
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSN 87
>UNIPROTKB|Q9DED4 [details] [associations]
symbol:cirbp-b "Cold-inducible RNA-binding protein B"
species:8355 "Xenopus laevis" [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007369
"gastrulation" evidence=IMP] [GO:0009409 "response to cold"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0045727 "positive regulation of translation" evidence=ISS]
[GO:0048255 "mRNA stabilization" evidence=IGI;IMP] [GO:0048793
"pronephros development" evidence=ISS] [GO:0060212 "negative
regulation of nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IMP] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0005654
GO:GO:0016477 GO:GO:0022008 GO:GO:0000166 GO:GO:0009409
Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
GO:GO:0007369 GO:GO:0048793 HOVERGEN:HBG107480 GO:GO:0060212
EMBL:AB044535 EMBL:BC054250 RefSeq:NP_001079794.1 UniGene:Xl.8151
HSSP:P09651 ProteinModelPortal:Q9DED4 SMR:Q9DED4 MINT:MINT-274223
PRIDE:Q9DED4 GeneID:379484 KEGG:xla:379484 CTD:379484
Xenbase:XB-GENE-492785 KO:K13195 Uniprot:Q9DED4
Length = 166
Score = 137 (53.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 26/73 (35%), Positives = 46/73 (63%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE-AVDKVFS 68
K+F+G L + + L++ FS+YGQI V+ D+ T S+GFGFVTF+N + A D + +
Sbjct: 6 KLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMA 65
Query: 69 TDSHVLEGSRLSI 81
+ ++G ++ +
Sbjct: 66 MNGKAVDGRQIRV 78
>MGI|MGI:108039 [details] [associations]
symbol:Dbil5 "diazepam binding inhibitor-like 5"
species:10090 "Mus musculus" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA]
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
MGI:MGI:108039 GO:GO:0005737 Gene3D:1.20.80.10 InterPro:IPR014352
GO:GO:0006810 GO:GO:0007283 GO:GO:0000062 eggNOG:COG4281
GO:GO:0008289 InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880
HOGENOM:HOG000261845 HOVERGEN:HBG000398 CTD:13168 OMA:QATQGDC
OrthoDB:EOG4KD6NN EMBL:S83465 EMBL:AF229807 EMBL:BC048474
IPI:IPI00113781 RefSeq:NP_067269.1 UniGene:Mm.347413
ProteinModelPortal:O09035 SMR:O09035 PaxDb:O09035 PRIDE:O09035
Ensembl:ENSMUST00000040806 GeneID:13168 KEGG:mmu:13168
InParanoid:O09035 NextBio:283256 Bgee:O09035 CleanEx:MM_DBIL5
Genevestigator:O09035 GermOnline:ENSMUSG00000038057 Uniprot:O09035
Length = 87
Score = 137 (53.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 31/76 (40%), Positives = 41/76 (53%)
Query: 98 FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQM 157
F AC L L + L Y+ YKQAT G CNI P ++ AK+KY AW M
Sbjct: 6 FEMACASLKQLKGPVSDQEKLLVYSFYKQATQGDCNIPVPPATDVRAKAKYEAWMVNKGM 65
Query: 158 AKSEAMSKYIALLKEV 173
+K +AM YIA ++E+
Sbjct: 66 SKMDAMRIYIAKVEEL 81
>SGD|S000003269 [details] [associations]
symbol:ACB1 "Acyl-CoA-binding protein, transports newly
synthesized acyl-CoA ester" species:4932 "Saccharomyces cerevisiae"
[GO:0000062 "fatty-acyl-CoA binding" evidence=IEA;ISS] [GO:0006631
"fatty acid metabolic process" evidence=IDA;IMP] [GO:0001300
"chronological cell aging" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005576
"extracellular region" evidence=IDA;IMP] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005324
"long-chain fatty acid transporter activity" evidence=IMP]
[GO:0015909 "long-chain fatty acid transport" evidence=IMP]
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
SGD:S000003269 GO:GO:0005634 GO:GO:0005737 GO:GO:0005576
EMBL:BK006941 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0006631
GO:GO:0001300 GO:GO:0000062 eggNOG:COG4281
GeneTree:ENSGT00680000099745 GO:GO:0008289 InterPro:IPR022408
SUPFAM:SSF47027 PROSITE:PS00880 HOGENOM:HOG000261845 OMA:GDNTTDK
OrthoDB:EOG454D8D EMBL:M99489 EMBL:Y08687 EMBL:Y08689 EMBL:DQ115390
EMBL:Z72822 PIR:S31247 RefSeq:NP_011551.3 RefSeq:NP_011555.3
PDB:1ST7 PDBsum:1ST7 ProteinModelPortal:P31787 SMR:P31787
IntAct:P31787 MINT:MINT-2788579 STRING:P31787 PaxDb:P31787
PeptideAtlas:P31787 EnsemblFungi:YGR037C GeneID:852925
GeneID:852932 KEGG:sce:YGR037C KEGG:sce:YGR041W
EvolutionaryTrace:P31787 NextBio:972643 Genevestigator:P31787
GermOnline:YGR037C GO:GO:0005324 Uniprot:P31787
Length = 87
Score = 137 (53.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 98 FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQM 157
F + + L K + LL+ YALYKQATVG + +KP +NM+ + K+ AW +L
Sbjct: 6 FEEKAKAVNELPTKPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYKWEAWENLKGK 65
Query: 158 AKSEAMSKYIALLKEVDA 175
++ +A +YIAL+ ++ A
Sbjct: 66 SQEDAEKEYIALVDQLIA 83
>UNIPROTKB|F6RSR1 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=IEA] [GO:0032496 "response to lipopolysaccharide"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0032496
GO:GO:0006954 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 OMA:GPMKQNL EMBL:DAAA02020383
IPI:IPI00687625 Ensembl:ENSBTAT00000022514 Uniprot:F6RSR1
Length = 310
Score = 155 (59.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
++ K+FVG L V+ +L + FS++G + A ++ DK +G +GFGFV FQN +A DK
Sbjct: 101 KVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKA 160
Query: 67 FSTDSHVLEGSRLSIQ 82
H ++G R+ ++
Sbjct: 161 AVVKFHPIQGHRVEVK 176
Score = 122 (48.0 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 28/91 (30%), Positives = 47/91 (51%)
Query: 1 MSNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNK 60
M NS QL K+F+G L S + L+ F +G + + V+ + T S+ FGFVT+ N
Sbjct: 6 MENS--QLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNV 63
Query: 61 EAVDKVFSTDSHVLEGSRLSIQPSDSHNRMA 91
E D + H ++G+ + ++ + S A
Sbjct: 64 EEADAAMAASPHAVDGNTVELKRAVSREDSA 94
>UNIPROTKB|E2RBV8 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IEA] [GO:0032496 "response to
lipopolysaccharide" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0032496 GO:GO:0006954 Gene3D:3.30.70.330
GO:GO:0017091 GO:GO:0070935 GeneTree:ENSGT00700000104255 CTD:10949
KO:K12894 OMA:GPMKQNL EMBL:AAEX03007810 RefSeq:XP_538645.2
ProteinModelPortal:E2RBV8 Ensembl:ENSCAFT00000001730 GeneID:481524
KEGG:cfa:481524 NextBio:20856300 Uniprot:E2RBV8
Length = 310
Score = 155 (59.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
++ K+FVG L V+ +L + FS++G + A ++ DK +G +GFGFV FQN +A DK
Sbjct: 96 KVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKA 155
Query: 67 FSTDSHVLEGSRLSIQ 82
H ++G R+ ++
Sbjct: 156 AVVKFHPIQGHRVEVK 171
Score = 122 (48.0 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 28/91 (30%), Positives = 47/91 (51%)
Query: 1 MSNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNK 60
M NS QL K+F+G L S + L+ F +G + + V+ + T S+ FGFVT+ N
Sbjct: 1 MENS--QLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNV 58
Query: 61 EAVDKVFSTDSHVLEGSRLSIQPSDSHNRMA 91
E D + H ++G+ + ++ + S A
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSA 89
>DICTYBASE|DDB_G0292422 [details] [associations]
symbol:DDB_G0292422 "RNA-binding region RNP-1
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0292422 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AAFI02000190 KO:K14411
eggNOG:NOG289504 RefSeq:XP_629598.1 ProteinModelPortal:Q54D98
EnsemblProtists:DDB0233639 GeneID:8628658 KEGG:ddi:DDB_G0292422
InParanoid:Q54D98 OMA:YYEDESS Uniprot:Q54D98
Length = 687
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 28/91 (30%), Positives = 56/91 (61%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG LP ++ ++ +FSE+G+I +++ +KN G KGFGF+ F+++ + + +
Sbjct: 195 KLFVGGLPKHITSDDFNNYFSEFGEISEYNLLTEKN-GTIKGFGFICFKDESVNEIILNE 253
Query: 70 DSHVLEGSRLSIQPSDSHNRMAENMEDRFNQ 100
H++ G R+ I+ +DS N+ + + + Q
Sbjct: 254 QQHIILGKRVDIRIADSQNKRLQQQQQQQQQ 284
Score = 128 (50.1 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVM-FDKNTGLSKGFGFVTFQNKEAVDKVFS 68
KIFVG L T S+ LK +FS +G++ + V+ + S+GFGFVTF + +D+V
Sbjct: 107 KIFVGGLLKTSSNEILKDYFSNFGEVKESIVIKATEKASKSRGFGFVTFVDPSVIDEVIL 166
Query: 69 TDSHVLEGSRLSIQPSDSHNRMAE 92
+ H +EG + I+ + M E
Sbjct: 167 IN-HSIEGKNVEIRRAIPKEEMTE 189
>UNIPROTKB|F1RH94 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=IEA] [GO:0032496 "response to lipopolysaccharide"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0032496
GO:GO:0006954 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 OMA:GPMKQNL EMBL:CU468422
Ensembl:ENSSSCT00000015648 Uniprot:F1RH94
Length = 315
Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
++ K+FVG L V+ +L + FS++G + A ++ DK +G +GFGFV FQN +A DK
Sbjct: 101 KVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKA 160
Query: 67 FSTDSHVLEGSRLSIQ 82
H ++G R+ ++
Sbjct: 161 AVVKFHPIQGHRVEVK 176
Score = 122 (48.0 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 28/91 (30%), Positives = 47/91 (51%)
Query: 1 MSNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNK 60
M NS QL K+F+G L S + L+ F +G + + V+ + T S+ FGFVT+ N
Sbjct: 6 MENS--QLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNV 63
Query: 61 EAVDKVFSTDSHVLEGSRLSIQPSDSHNRMA 91
E D + H ++G+ + ++ + S A
Sbjct: 64 EEADAAMAASPHAVDGNTVELKRAVSREDSA 94
>TAIR|locus:2077577 [details] [associations]
symbol:AT3G06970 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:DQ446643 IPI:IPI00542567
RefSeq:NP_187353.2 UniGene:At.53209 ProteinModelPortal:Q1PES4
SMR:Q1PES4 EnsemblPlants:AT3G06970.1 GeneID:819882
KEGG:ath:AT3G06970 TAIR:At3g06970 eggNOG:NOG252859
HOGENOM:HOG000124795 InParanoid:Q1PES4 OMA:TNCNLAS
ProtClustDB:CLSN2920257 Genevestigator:Q1PES4 Uniprot:Q1PES4
Length = 317
Score = 153 (58.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 28/101 (27%), Positives = 60/101 (59%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE 61
+N ++ KIFVGNL W + ++L+++F ++GQ+++A+V+ + G SKG+GF+TF++
Sbjct: 5 NNHDTRVTKIFVGNLTWRTTADDLRRYFEQFGQVVDANVVSETYPGRSKGYGFITFRDYV 64
Query: 62 AVDKVFSTDSHVLEG--SRLSIQPSDSHNRMAE-NMEDRFN 99
+ + +++G + ++ + + M N+ FN
Sbjct: 65 STVRALQNSKPIIDGRTTNCNLASAGAKQNMNHPNLNGSFN 105
Score = 39 (18.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 141 NMEAKSKYNAWNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQEEINWDWKPNQKAMSKYI 200
N EA +K ++ + Q K I ++ D+E E+IN D + + K
Sbjct: 204 NEEAVTKSDS--DVDQQKAKNVKGKNIGQDGDIKQDARDQE-EKIN-DQEDSIK--QDVD 257
Query: 201 ALLNEVDASWEDKEQEEINWDESQESGSKENEGQTK 236
N++ + E +E+ Q+ G+K++E TK
Sbjct: 258 EEQNKISGIEKVVENQEVKIMCEQKHGTKQDEDVTK 293
>UNIPROTKB|F1NCI5 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006954 "inflammatory
response" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0032496 "response to lipopolysaccharide" evidence=IEA]
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0006954
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 OMA:EDNQHAL EMBL:AADN02028465
IPI:IPI00573116 Ensembl:ENSGALT00000009947 Uniprot:F1NCI5
Length = 328
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
++ K+FVG L V +L + FS++G + A ++ DK +G +GFGFV FQN +A DK
Sbjct: 117 KVKKLFVGGLKGDVGEGDLVQHFSQFGPVEKAEIIADKQSGKKRGFGFVYFQNHDAADKA 176
Query: 67 FSTDSHVLEGSRLSIQ 82
H ++G R+ ++
Sbjct: 177 AVVKFHPIQGHRVEVK 192
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 27/92 (29%), Positives = 48/92 (52%)
Query: 1 MSNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNK 60
M NS QL K+F+G L + L++ F+ YG + + V+ + T S+ FGFVT+
Sbjct: 22 MENS--QLCKLFIGGLNVQTTEAGLREHFAAYGTLTDCVVVLNPQTKRSRCFGFVTYSAV 79
Query: 61 EAVDKVFSTDSHVLEGSRLSIQPSDSHNRMAE 92
E D + H ++G+ + ++ + S A+
Sbjct: 80 EEADAAMAASPHAVDGNSVELKRAVSREDSAK 111
>UNIPROTKB|E2RTI9 [details] [associations]
symbol:ACBD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS51228 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
CTD:79777 GeneTree:ENSGT00680000099745 OMA:WLVGTVR
InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880
EMBL:AAEX03006405 RefSeq:XP_548051.2 Ensembl:ENSCAFT00000022047
GeneID:490928 KEGG:cfa:490928 Uniprot:E2RTI9
Length = 300
Score = 154 (59.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 27/57 (47%), Positives = 43/57 (75%)
Query: 117 LLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQMAKSEAMSKYIALLKEV 173
+L+FY+ YKQAT+G C + +P +++ + K++AWNSLG+M++ EAMS YI +K V
Sbjct: 39 MLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLV 95
>UNIPROTKB|P12026 [details] [associations]
symbol:DBI "Acyl-CoA-binding protein" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0043588 "skin
development" evidence=IEA] [GO:0006641 "triglyceride metabolic
process" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0001942 "hair follicle development" evidence=IEA] [GO:0042742
"defense response to bacterium" evidence=IEA] [GO:0008289 "lipid
binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
GO:GO:0005783 GO:GO:0005739 GO:GO:0005794 GO:GO:0043588
Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0006810 GO:GO:0042742
GO:GO:0000062 eggNOG:COG4281 GeneTree:ENSGT00680000099745
GO:GO:0008289 InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880
HOGENOM:HOG000261845 HOVERGEN:HBG000398 OrthoDB:EOG4GF3GS
OMA:GDNTTDK CTD:1622 KO:K08762 GO:GO:0001942 GO:GO:0006641
EMBL:AB019792 EMBL:DQ885192 PIR:S00805 RefSeq:NP_999284.1
UniGene:Ssc.55858 ProteinModelPortal:P12026 SMR:P12026
STRING:P12026 Ensembl:ENSSSCT00000024406 GeneID:397212
KEGG:ssc:397212 ArrayExpress:P12026 Uniprot:P12026
Length = 87
Score = 136 (52.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 98 FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQM 157
F +A + + +L K +L Y+ YKQATVG N ++P +++ K+K++AWN L
Sbjct: 6 FEKAAEEVKNLKTKPADDEMLFIYSHYKQATVGDINTERPGILDLKGKAKWDAWNGLKGT 65
Query: 158 AKSEAMSKYIALLKEV 173
+K +AM YI ++E+
Sbjct: 66 SKEDAMKAYINKVEEL 81
>RGD|68360 [details] [associations]
symbol:Dbil5 "diazepam binding inhibitor-like 5" species:10116
"Rattus norvegicus" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006637
"acyl-CoA metabolic process" evidence=TAS] [GO:0006810 "transport"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0008289 "lipid binding" evidence=IEA] InterPro:IPR000582
Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228 RGD:68360 GO:GO:0005737
Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0006810 GO:GO:0007283
GO:GO:0000062 eggNOG:COG4281 GeneTree:ENSGT00680000099745
GO:GO:0008289 InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880
HOGENOM:HOG000261845 HOVERGEN:HBG000398 GO:GO:0006637 CTD:13168
OMA:QATQGDC OrthoDB:EOG4KD6NN EMBL:AF128531 EMBL:AF128092
IPI:IPI00195175 RefSeq:NP_067607.1 UniGene:Rn.35510
ProteinModelPortal:P56702 PRIDE:P56702 Ensembl:ENSRNOT00000010227
GeneID:59116 KEGG:rno:59116 InParanoid:P56702 NextBio:611771
Genevestigator:P56702 GermOnline:ENSRNOG00000007771 Uniprot:P56702
Length = 87
Score = 136 (52.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 98 FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQM 157
F AC L L L L Y+ YKQAT G CNI P +++AK+K+ AW M
Sbjct: 6 FEMACASLKQLKGPLSDQEKLLVYSFYKQATQGDCNIPVPPATDVKAKAKWEAWMVNKGM 65
Query: 158 AKSEAMSKYIALLKEV 173
+K +AM YIA ++E+
Sbjct: 66 SKMDAMRIYIAKVEEL 81
>ZFIN|ZDB-GENE-030826-25 [details] [associations]
symbol:msi2a "musashi homolog 2a (Drosophila)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-030826-25 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 OrthoDB:EOG48GW3J HSSP:Q61474
EMBL:CR931799 EMBL:CR931806 EMBL:BC045335 IPI:IPI00489753
RefSeq:NP_997961.1 UniGene:Dr.32677 SMR:Q7ZW10
Ensembl:ENSDART00000099473 Ensembl:ENSDART00000132096
GeneID:100002680 KEGG:dre:100002680 CTD:100002680 InParanoid:Q7ZW10
OMA:MEADASQ NextBio:20785547 Uniprot:Q7ZW10
Length = 388
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 32/92 (34%), Positives = 52/92 (56%)
Query: 1 MSNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNK 60
+++S K+F+G L W S + L+ +F ++G+I VM D T S+GFGF+TF +
Sbjct: 13 LNDSQHDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFADV 72
Query: 61 EAVDKVFSTDSHVLEGSRLSIQPSDSHNRMAE 92
+VDKV + H L+ +I P + R A+
Sbjct: 73 SSVDKVLAQPHHELDSK--TIDPKVAFPRRAQ 102
Score = 151 (58.2 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 27/68 (39%), Positives = 45/68 (66%)
Query: 5 IRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVD 64
+ + KIFVG L + ++K++F ++G++ +A +MFDK T +GFGFVTF+N++ V+
Sbjct: 106 VTRTKKIFVGGLSASTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVE 165
Query: 65 KVFSTDSH 72
KV H
Sbjct: 166 KVCEIHFH 173
>UNIPROTKB|G3MY63 [details] [associations]
symbol:BOLL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00530000063480 EMBL:DAAA02005516 EMBL:DAAA02005517
EMBL:DAAA02005518 Ensembl:ENSBTAT00000065390 Uniprot:G3MY63
Length = 271
Score = 152 (58.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
N+IFVG + + + N+L+KFFS+YG + ++ D+ G+SKG+GFVTF+ +E K+
Sbjct: 45 NRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQ 103
Query: 69 TDSHV-LEGSRLSIQPS 84
+ + +L+I P+
Sbjct: 104 EAEKLNYKDKKLNIGPA 120
>ZFIN|ZDB-GENE-050320-86 [details] [associations]
symbol:msi1 "musashi homolog 1 (Drosophila)"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0007417 "central
nervous system development" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-050320-86 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0007417 GO:GO:0003676 EMBL:AB698464 Uniprot:J4C3V8
Length = 349
Score = 155 (59.6 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 29/93 (31%), Positives = 52/93 (55%)
Query: 5 IRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVD 64
+ + KIFVG L + ++K++F ++G++ +A +MFDK T +GFGFVTF+N++ V+
Sbjct: 105 VTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVE 164
Query: 65 KVFSTDSHVLEGSRLSIQPSDSHNRMAENMEDR 97
KV H + + + + M+ R
Sbjct: 165 KVCEIHFHEINNKMVECKKAQPKEVMSPTGSSR 197
Score = 151 (58.2 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 31/83 (37%), Positives = 48/83 (57%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + LK +F ++G++ + VM D T S+GFGFVTF ++ VDKV +
Sbjct: 21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 70 DSHVLEGSRLSIQPSDSHNRMAE 92
H L+ +I P + R A+
Sbjct: 81 TRHELDSK--TIDPKVAFPRRAQ 101
>RGD|1359427 [details] [associations]
symbol:Eci2 "enoyl-CoA delta isomerase 2" species:10116 "Rattus
norvegicus" [GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
[GO:0004165 "dodecenoyl-CoA delta-isomerase activity"
evidence=IEA;ISO] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0005777
"peroxisome" evidence=ISO;IDA] [GO:0005782 "peroxisomal matrix"
evidence=IEA;ISO] [GO:0006635 "fatty acid beta-oxidation"
evidence=IDA] [GO:0009062 "fatty acid catabolic process"
evidence=ISO] [GO:0016863 "intramolecular oxidoreductase activity,
transposing C=C bonds" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] InterPro:IPR000582
InterPro:IPR001753 Pfam:PF00378 Pfam:PF00887 PRINTS:PR00689
PROSITE:PS51228 RGD:1359427 GO:GO:0005739 GO:GO:0005777
Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0006635 GO:GO:0005782
GO:GO:0000062 eggNOG:COG4281 InterPro:IPR022408 SUPFAM:SSF47027
PROSITE:PS00880 HSSP:O75521 GO:GO:0004165
GeneTree:ENSGT00670000097595 CTD:10455 KO:K13239 OMA:RWLSDEC
OrthoDB:EOG49P9ZK EMBL:BC083764 IPI:IPI00208203
RefSeq:NP_001006967.1 UniGene:Rn.108029 ProteinModelPortal:Q5XIC0
SMR:Q5XIC0 PhosphoSite:Q5XIC0 PRIDE:Q5XIC0
Ensembl:ENSRNOT00000022022 GeneID:291075 KEGG:rno:291075
UCSC:RGD:1359427 InParanoid:Q5XIC0 SABIO-RK:Q5XIC0 NextBio:632071
Genevestigator:Q5XIC0 GO:GO:0016863 Uniprot:Q5XIC0
Length = 391
Score = 156 (60.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 38/116 (32%), Positives = 59/116 (50%)
Query: 90 MAENMEDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYN 149
M +D F A + + L K + L+ YALYKQAT G C + KP ++ K+K++
Sbjct: 34 MRATQQD-FENAMNQVKLLKKDPGNEVKLRLYALYKQATEGPCTMPKPGVFDFVNKAKWD 92
Query: 150 AWNSLGQMAKSEAMSKYIALLKEVDAGWEDKEQEEINWDWKPNQKAMSKYIALLNE 205
AWN+LG + K A Y+ L+ + + E Q + D K + SK I + +E
Sbjct: 93 AWNALGSLPKETARQNYVDLVSSLSSSSEASSQGKGGADGKAQE---SKGILVTSE 145
>UNIPROTKB|E1BTK3 [details] [associations]
symbol:ZCRB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001878
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00098 PROSITE:PS50102
PROSITE:PS50158 SMART:SM00343 SMART:SM00360 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
Gene3D:4.10.60.10 GO:GO:0005689 GeneTree:ENSGT00600000084414
CTD:85437 KO:K13154 OMA:RXVTIMK EMBL:AADN02010031 IPI:IPI00592809
RefSeq:XP_416034.1 ProteinModelPortal:E1BTK3
Ensembl:ENSGALT00000015532 GeneID:417791 KEGG:gga:417791
NextBio:20821039 Uniprot:E1BTK3
Length = 216
Score = 130 (50.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 27/88 (30%), Positives = 52/88 (59%)
Query: 11 IFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF-ST 69
++V NLP+ +++N+L + FS+YG+++ ++M DK+T SKG F+ F +KE+ +
Sbjct: 12 VYVSNLPFALTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNCSRAL 71
Query: 70 DSHVLEGSRLSIQPSDSHNRMAENMEDR 97
++ L G + + + R AE + R
Sbjct: 72 NNKQLFGRVIKASIAIDNGRAAEFIRRR 99
Score = 54 (24.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 16/74 (21%), Positives = 36/74 (48%)
Query: 181 EQEEINWDWKPNQKAMSKYIALLNEVDASWEDK-EQEEINWDESQESGSKENEGQTKGWV 239
E EEI + + ++ + L++ A + K E+E+ W ++ S ++ + + +
Sbjct: 144 EPEEIEEEEESEEEGEDPALDSLSQAIAVQQAKIEEEQQRWTQTAGESSVSDDSK-RPRI 202
Query: 240 NVSSMINDESQLDD 253
S+ +DE +L D
Sbjct: 203 KKSAYFSDEEELSD 216
Score = 39 (18.8 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 10/56 (17%), Positives = 28/56 (50%)
Query: 213 KEQEEINWDESQESGSKENEGQTKGWVNVSSMIN-DESQLDDNEKNIYEWAKEGKL 267
K ++ + +E +E E EG+ ++S I ++++++ ++ + A E +
Sbjct: 138 KRKKVVEPEEIEEEEESEEEGEDPALDSLSQAIAVQQAKIEEEQQRWTQTAGESSV 193
>TAIR|locus:2202740 [details] [associations]
symbol:AT1G60000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC005966 HOGENOM:HOG000276232 HSSP:P33240
EMBL:AF348590 EMBL:AY088142 EMBL:AK316953 IPI:IPI00532959
PIR:C96624 RefSeq:NP_176208.1 UniGene:At.17057
ProteinModelPortal:Q9ZUJ3 SMR:Q9ZUJ3 STRING:Q9ZUJ3 PRIDE:Q9ZUJ3
EnsemblPlants:AT1G60000.1 GeneID:842294 KEGG:ath:AT1G60000
TAIR:At1g60000 InParanoid:Q9ZUJ3 OMA:NVEDCNI PhylomeDB:Q9ZUJ3
ProtClustDB:CLSN2913540 ArrayExpress:Q9ZUJ3 Genevestigator:Q9ZUJ3
Uniprot:Q9ZUJ3
Length = 258
Score = 151 (58.2 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF- 67
+K+FVGNL WTV+ L F E G ++ A V+FD +TG S+G+GFV + +K ++
Sbjct: 177 HKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALE 236
Query: 68 STDSHVLEGSRLSI 81
S D LEG + +
Sbjct: 237 SLDGFELEGRAIRV 250
>UNIPROTKB|K7EJM5 [details] [associations]
symbol:TARDBP "TAR DNA-binding protein 43" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
Gene3D:3.30.70.330 EMBL:AL109811 HGNC:HGNC:11571
Ensembl:ENST00000473118 Uniprot:K7EJM5
Length = 201
Score = 143 (55.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 30/97 (30%), Positives = 51/97 (52%)
Query: 1 MSNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNK 60
+ ++++ + + V LPW + +LK++FS +G+++ V D TG SKGFGFV F
Sbjct: 96 VKRAVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEY 155
Query: 61 EAVDKVFSTDSHVLEGSRLSIQPSDSHNRMAENMEDR 97
E KV S H+++G + +S E + R
Sbjct: 156 ETQVKVMS-QRHMIDGRWCDCKLPNSKQSQDEPLRSR 191
>UNIPROTKB|B4DHE8 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HOGENOM:HOG000234441 HOVERGEN:HBG002295 UniGene:Hs.658922
HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
EMBL:AC015883 EMBL:AC091181 EMBL:AK295060 IPI:IPI00910884
SMR:B4DHE8 STRING:B4DHE8 Ensembl:ENST00000416426 UCSC:uc010wnm.1
Uniprot:B4DHE8
Length = 324
Score = 154 (59.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 32/82 (39%), Positives = 47/82 (57%)
Query: 11 IFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFSTD 70
+F+G L W S + L+ +FS++G+I VM D T S+GFGFVTF + +VDKV
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 71 SHVLEGSRLSIQPSDSHNRMAE 92
H L+ +I P + R A+
Sbjct: 61 HHELDSK--TIDPKVAFPRRAQ 80
Score = 151 (58.2 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 5 IRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVD 64
+ + KIFVG L ++K++F ++G++ +A +MFDK T +GFGFVTF+N++ V+
Sbjct: 84 VTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVE 143
Query: 65 KVFSTDSH 72
KV H
Sbjct: 144 KVCEIHFH 151
>UNIPROTKB|F1S420 [details] [associations]
symbol:F1S420 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104347 InterPro:IPR012956 Pfam:PF08143
EMBL:CU914278 Ensembl:ENSSSCT00000015327 OMA:NHEVAGS Uniprot:F1S420
Length = 300
Score = 153 (58.9 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 25/65 (38%), Positives = 44/65 (67%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE 61
S + K+FVG L W S +LK +F+++G++++ ++ D NTG S+GFGF+ F++
Sbjct: 75 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAA 134
Query: 62 AVDKV 66
+V+KV
Sbjct: 135 SVEKV 139
>MGI|MGI:1355299 [details] [associations]
symbol:Hnrpdl "heterogeneous nuclear ribonucleoprotein
D-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISA] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008143 "poly(A)
RNA binding" evidence=ISO] [GO:0010468 "regulation of gene
expression" evidence=ISO] [GO:0016071 "mRNA metabolic process"
evidence=ISA] [GO:0034046 "poly(G) RNA binding" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1355299 GO:GO:0005634 GO:GO:0005737
GO:GO:0016071 GO:GO:0006355 GO:GO:0000166 GO:GO:0003677
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103 ChiTaRS:HNRPDL
EMBL:AB017020 EMBL:AK011581 EMBL:AK172629 EMBL:BC021374
IPI:IPI00129417 UniGene:Mm.389579 ProteinModelPortal:Q9Z130
SMR:Q9Z130 IntAct:Q9Z130 STRING:Q9Z130 PhosphoSite:Q9Z130
PaxDb:Q9Z130 PRIDE:Q9Z130 InParanoid:Q9Z130 Bgee:Q9Z130
CleanEx:MM_HNRPDL Genevestigator:Q9Z130 Uniprot:Q9Z130
Length = 301
Score = 153 (58.9 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W S +L ++ S +G++++ ++ D TG S+GFGFV F++ +VDKV
Sbjct: 30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 89
Query: 70 DSHVLEG 76
H L+G
Sbjct: 90 KEHKLDG 96
Score = 121 (47.7 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 24/89 (26%), Positives = 46/89 (51%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+FVG L S ++K++F +G+I N + D T +GF F+T+ ++E V K+ +
Sbjct: 115 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLES 174
Query: 70 DSHVLEGSRLSI---QPSDSHNRMAENME 95
H + + I QP + + + + +
Sbjct: 175 RYHQIGSGKCEIKVAQPKEVYRQQQQQQK 203
>UNIPROTKB|H9L0U4 [details] [associations]
symbol:CIRBP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104309 EMBL:AADN02030141 EMBL:AADN02030142
Ensembl:ENSGALT00000029134 Uniprot:H9L0U4
Length = 167
Score = 135 (52.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN-KEAVDKVFS 68
K+ VG L + + L++ FS+YGQI V+ D+ T S+GFGFVTF+N +A D + +
Sbjct: 7 KLLVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 69 TDSHVLEGSRLSIQPS--DSHNR 89
+ ++G ++ + + S NR
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENR 89
>UNIPROTKB|H9L3B3 [details] [associations]
symbol:CIRBP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104309 EMBL:AADN02030141 EMBL:AADN02030142
Ensembl:ENSGALT00000036191 Uniprot:H9L3B3
Length = 172
Score = 135 (52.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN-KEAVDKVFS 68
K+ VG L + + L++ FS+YGQI V+ D+ T S+GFGFVTF+N +A D + +
Sbjct: 7 KLLVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 69 TDSHVLEGSRLSIQPS--DSHNR 89
+ ++G ++ + + S NR
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENR 89
>UNIPROTKB|P07107 [details] [associations]
symbol:DBI "Acyl-CoA-binding protein" species:9913 "Bos
taurus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0043588 "skin
development" evidence=IEA] [GO:0006641 "triglyceride metabolic
process" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0001942 "hair follicle development" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
GO:GO:0005783 GO:GO:0005739 GO:GO:0005794 GO:GO:0043588
Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0006810 GO:GO:0000062
eggNOG:COG4281 GeneTree:ENSGT00680000099745 GO:GO:0008289
InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880
HOGENOM:HOG000261845 HOVERGEN:HBG000398 OrthoDB:EOG4GF3GS
EMBL:M15886 EMBL:BC114181 IPI:IPI00695419 PIR:A26448
RefSeq:NP_001106792.1 UniGene:Bt.46917 PDB:1ACA PDB:1HB6 PDB:1HB8
PDB:1NTI PDB:1NVL PDB:2ABD PDBsum:1ACA PDBsum:1HB6 PDBsum:1HB8
PDBsum:1NTI PDBsum:1NVL PDBsum:2ABD ProteinModelPortal:P07107
SMR:P07107 STRING:P07107 PRIDE:P07107 Ensembl:ENSBTAT00000012523
GeneID:768330 KEGG:bta:768330 CTD:1622 InParanoid:P07107 KO:K08762
OMA:CNTDKPG EvolutionaryTrace:P07107 NextBio:20918588 GO:GO:0001942
GO:GO:0006641 Uniprot:P07107
Length = 87
Score = 135 (52.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 98 FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQM 157
F++A + + L K +L Y+ YKQATVG N ++P + + K+K++AWN L
Sbjct: 6 FDKAAEEVKHLKTKPADEEMLFIYSHYKQATVGDINTERPGMLDFKGKAKWDAWNELKGT 65
Query: 158 AKSEAMSKYIALLKEV 173
+K +AM YI ++E+
Sbjct: 66 SKEDAMKAYIDKVEEL 81
>UNIPROTKB|Q8WN94 [details] [associations]
symbol:DBI "Acyl-CoA-binding protein" species:9986
"Oryctolagus cuniculus" [GO:0000062 "fatty-acyl-CoA binding"
evidence=NAS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006869 "lipid transport" evidence=NAS] [GO:0030547 "receptor
inhibitor activity" evidence=NAS] [GO:2000272 "negative regulation
of receptor activity" evidence=NAS] InterPro:IPR000582 Pfam:PF00887
PRINTS:PR00689 PROSITE:PS51228 GO:GO:0005783 GO:GO:0005739
GO:GO:0005794 GO:GO:0043588 GO:GO:0006869 Gene3D:1.20.80.10
InterPro:IPR014352 GO:GO:0000062 eggNOG:COG4281
GeneTree:ENSGT00680000099745 GO:GO:0008289 InterPro:IPR022408
SUPFAM:SSF47027 PROSITE:PS00880 HOGENOM:HOG000261845
HOVERGEN:HBG000398 OrthoDB:EOG4GF3GS OMA:GDNTTDK GO:GO:0001942
GO:GO:0006641 EMBL:AF407578 RefSeq:NP_001075582.1 UniGene:Ocu.6234
ProteinModelPortal:Q8WN94 SMR:Q8WN94 Ensembl:ENSOCUT00000004563
GeneID:100008823 CTD:1370 GO:GO:0030547 Uniprot:Q8WN94
Length = 87
Score = 135 (52.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 26/76 (34%), Positives = 46/76 (60%)
Query: 98 FNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQM 157
F +A + + +L K + +L Y+ YKQATVG N ++P +++ K+K++AWN L
Sbjct: 6 FEKAAEEVKNLKTKPADAEMLFIYSHYKQATVGDVNTERPGMLDLKGKAKWDAWNELKGT 65
Query: 158 AKSEAMSKYIALLKEV 173
+K AM Y+ ++E+
Sbjct: 66 SKESAMRAYVDKVEEL 81
>UNIPROTKB|Q9PTX2 [details] [associations]
symbol:cirbp "Cold-inducible RNA-binding protein"
species:8400 "Rana catesbeiana" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0007369 "gastrulation" evidence=ISS] [GO:0009409
"response to cold" evidence=ISS] [GO:0009790 "embryo development"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0019899 "enzyme binding" evidence=ISS] [GO:0022008
"neurogenesis" evidence=ISS] [GO:0042750 "hibernation"
evidence=IEP] [GO:0045727 "positive regulation of translation"
evidence=ISS] [GO:0048255 "mRNA stabilization" evidence=ISS]
[GO:0048793 "pronephros development" evidence=ISS] [GO:0060212
"negative regulation of nuclear-transcribed mRNA poly(A) tail
shortening" evidence=ISS] [GO:0005840 "ribosome" evidence=ISS]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0005654
GO:GO:0016477 GO:GO:0022008 GO:GO:0000166 GO:GO:0009409
Gene3D:3.30.70.330 GO:GO:0019899 GO:GO:0048255 GO:GO:0003730
GO:GO:0045727 GO:GO:0007369 GO:GO:0048793 HOVERGEN:HBG107480
GO:GO:0060212 HSSP:P09651 EMBL:AB025351 ProteinModelPortal:Q9PTX2
SMR:Q9PTX2 GO:GO:0042750 Uniprot:Q9PTX2
Length = 164
Score = 135 (52.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQN-KEAVDKVFS 68
K+FVG L + L+ FS+YGQI V+ D+ T S+GFGFVTF+N ++A D +
Sbjct: 7 KLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDAMAG 66
Query: 69 TDSHVLEGSRLSI-QPSDSHN 88
+ ++G ++ + Q S N
Sbjct: 67 MNGKTVDGRQIRVDQAGKSSN 87
>ASPGD|ASPL0000063757 [details] [associations]
symbol:AN10941 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0030529 EMBL:BN001304 ProteinModelPortal:C8VBB9
EnsemblFungi:CADANIAT00000536 HOGENOM:HOG000162494 OMA:MNPAMMQ
Uniprot:C8VBB9
Length = 559
Score = 158 (60.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 30/96 (31%), Positives = 58/96 (60%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
+KIFVG + + + K+FF ++G++++A++M DK+TG +GFGFVTF ++ AV+ S
Sbjct: 194 SKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALS 253
Query: 69 TDSHVLEGSRLSIQPSDSHNRMAENMEDRFNQACDY 104
+L G + ++ + + ++ DR + D+
Sbjct: 254 RPLEIL-GKTIEVKKAQPRGNLRDD-GDRGRRGRDF 287
Score = 157 (60.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 28/72 (38%), Positives = 48/72 (66%)
Query: 5 IRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVD 64
I++ K+F+G L W + LK++FS++G++ +VM D TG S+GFGF+TF++ + V+
Sbjct: 106 IKEDGKMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVN 165
Query: 65 KVFSTDSHVLEG 76
V + H L+G
Sbjct: 166 TVMVKE-HYLDG 176
>UNIPROTKB|B4DM51 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HOGENOM:HOG000234441 HOVERGEN:HBG002295 UniGene:Hs.658922
HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
EMBL:AC015883 EMBL:AC091181 EMBL:AK297295 IPI:IPI00908857
SMR:B4DM51 STRING:B4DM51 Ensembl:ENST00000442934 Uniprot:B4DM51
Length = 267
Score = 151 (58.2 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 5 IRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVD 64
+ + KIFVG L ++K++F ++G++ +A +MFDK T +GFGFVTF+N++ V+
Sbjct: 45 VTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVE 104
Query: 65 KVFSTDSH 72
KV H
Sbjct: 105 KVCEIHFH 112
>WB|WBGene00003423 [details] [associations]
symbol:msi-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K14411
GeneTree:ENSGT00700000104255 HSSP:Q61474 EMBL:Z35601 EMBL:AB036738
PIR:T24148 RefSeq:NP_497799.1 UniGene:Cel.19474
ProteinModelPortal:G5EFS2 SMR:G5EFS2 EnsemblMetazoa:R10E9.1.1
EnsemblMetazoa:R10E9.1.2 GeneID:175514 KEGG:cel:CELE_R10E9.1
CTD:175514 WormBase:R10E9.1 OMA:VADKVCE NextBio:888480
Uniprot:G5EFS2
Length = 320
Score = 153 (58.9 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 5 IRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVD 64
+ + K+F+G L T + ++K++F YG++ +A +MFDK T +GFGFVTF + E D
Sbjct: 130 VTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVAD 189
Query: 65 KVFSTDSHVLEG 76
KV H + G
Sbjct: 190 KVCEIHFHEING 201
Score = 149 (57.5 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 2 SNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKE 61
S+ + K+F+G L W + L+ +F +G++ VM D T ++GFGF+TF +
Sbjct: 38 SHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPS 97
Query: 62 AVDKVFSTDSHVLEGSRL 79
+VDKV + H L+G ++
Sbjct: 98 SVDKVLNNREHELDGKKI 115
>UNIPROTKB|C1JGV6 [details] [associations]
symbol:BOLL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045948 "positive regulation of translational
initiation" evidence=IEA] [GO:0008494 "translation activator
activity" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0007126
GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0008494
GO:GO:0045948 GeneTree:ENSGT00530000063480 OMA:YQAPAQC
EMBL:DAAA02005516 EMBL:DAAA02005517 EMBL:DAAA02005518 EMBL:FJ623266
IPI:IPI00867153 UniGene:Bt.25777 Ensembl:ENSBTAT00000044801
Uniprot:C1JGV6
Length = 295
Score = 152 (58.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
N+IFVG + + + N+L+KFFS+YG + ++ D+ G+SKG+GFVTF+ +E K+
Sbjct: 45 NRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQ 103
Query: 69 TDSHV-LEGSRLSIQPS 84
+ + +L+I P+
Sbjct: 104 EAEKLNYKDKKLNIGPA 120
>UNIPROTKB|F1P6I8 [details] [associations]
symbol:BOLL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045948 "positive regulation of translational
initiation" evidence=IEA] [GO:0008494 "translation activator
activity" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0007126
GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0008494
GO:GO:0045948 GeneTree:ENSGT00530000063480 OMA:YQAPAQC
EMBL:AAEX03017986 Ensembl:ENSCAFT00000037605 Uniprot:F1P6I8
Length = 295
Score = 152 (58.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
N+IFVG + + + N+L+KFFS+YG + ++ D+ G+SKG+GFVTF+ +E K+
Sbjct: 45 NRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQ 103
Query: 69 TDSHV-LEGSRLSIQPS 84
+ + +L+I P+
Sbjct: 104 EAEKLNYKDKKLNIGPA 120
>UNIPROTKB|H0YHB7 [details] [associations]
symbol:MSI1 "RNA-binding protein Musashi homolog 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC003982 HGNC:HGNC:7330 Ensembl:ENST00000546985 Uniprot:H0YHB7
Length = 233
Score = 148 (57.2 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 27/87 (31%), Positives = 51/87 (58%)
Query: 5 IRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVD 64
+ + KIFVG L + ++K++F ++G++ +A +MFDK T +GFGFVTF++++ V+
Sbjct: 37 VTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVE 96
Query: 65 KVFSTDSHVLEGSRLSIQPSDSHNRMA 91
KV H + + + + M+
Sbjct: 97 KVCEIHFHEINNKMVECKKAQPKEVMS 123
>ZFIN|ZDB-GENE-040426-2074 [details] [associations]
symbol:acbd4 "acyl-CoA binding domain containing
4" species:7955 "Danio rerio" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000582
Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
ZFIN:ZDB-GENE-040426-2074 Gene3D:1.20.80.10 InterPro:IPR014352
GO:GO:0000062 GeneTree:ENSGT00680000099745 SUPFAM:SSF47027
EMBL:CR846100 EMBL:CT583704 IPI:IPI00932466
Ensembl:ENSDART00000110001 OMA:KQAVCGP ArrayExpress:E7F6L9
Bgee:E7F6L9 Uniprot:E7F6L9
Length = 404
Score = 155 (59.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 30/86 (34%), Positives = 52/86 (60%)
Query: 92 ENMEDRFNQACDYLPSLVK----KLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSK 147
E+ + RF A D + SL K K +L+FY L+KQA G C + +P +++ + K
Sbjct: 11 EDCQRRFQAAVDVIQSLPKNGTYKPSYEVMLRFYGLFKQAVCGPCTLSRPGFWDPVGRYK 70
Query: 148 YNAWNSLGQMAKSEAMSKYIALLKEV 173
+ AW++LG+M++ AM+ Y+ +K+V
Sbjct: 71 WEAWSNLGEMSRETAMAAYVDEMKKV 96
>RGD|1308404 [details] [associations]
symbol:Acbd4 "acyl-CoA binding domain containing 4"
species:10116 "Rattus norvegicus" [GO:0000062 "fatty-acyl-CoA
binding" evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA]
InterPro:IPR000582 Pfam:PF00887 PRINTS:PR00689 PROSITE:PS51228
RGD:1308404 Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
CTD:79777 eggNOG:COG4281 GeneTree:ENSGT00680000099745
HOGENOM:HOG000231479 HOVERGEN:HBG028530 OMA:WLVGTVR
OrthoDB:EOG4GF3FX GO:GO:0008289 InterPro:IPR022408 SUPFAM:SSF47027
PROSITE:PS00880 EMBL:BC076387 IPI:IPI00464904 RefSeq:NP_001012013.1
UniGene:Rn.18284 ProteinModelPortal:Q6DGF9 PhosphoSite:Q6DGF9
PRIDE:Q6DGF9 Ensembl:ENSRNOT00000004163 GeneID:303577
KEGG:rno:303577 UCSC:RGD:1308404 InParanoid:Q6DGF9 NextBio:651653
ArrayExpress:Q6DGF9 Genevestigator:Q6DGF9
GermOnline:ENSRNOG00000003108 Uniprot:Q6DGF9
Length = 326
Score = 153 (58.9 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 27/57 (47%), Positives = 42/57 (73%)
Query: 117 LLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQMAKSEAMSKYIALLKEV 173
+L+FY+ YKQAT G C + +P +++ + K++AWNSLG+M++ EAMS YI +K V
Sbjct: 37 MLRFYSYYKQATAGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLV 93
>UNIPROTKB|E2QXH4 [details] [associations]
symbol:HNRNPA2B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 EMBL:AAEX03009384
ProteinModelPortal:E2QXH4 Ensembl:ENSCAFT00000004613 Uniprot:E2QXH4
Length = 301
Score = 152 (58.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 28/90 (31%), Positives = 47/90 (52%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ K+FVG + + L+ +F EYG+I ++ D+ +G +GFGFVTF + + VDK+
Sbjct: 59 VKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 118
Query: 68 STDSHVLEGSRLSIQPSDSHNRMAENMEDR 97
H + G ++ + S M E R
Sbjct: 119 LQKYHTINGHNAEVRKALSRQEMQEVQSSR 148
>FB|FBgn0035743 [details] [associations]
symbol:CG15829 species:7227 "Drosophila melanogaster"
[GO:0042049 "cellular acyl-CoA homeostasis" evidence=ISS]
[GO:0004857 "enzyme inhibitor activity" evidence=ISS] [GO:0000062
"fatty-acyl-CoA binding" evidence=ISS] [GO:0050809 "diazepam
binding" evidence=ISS] InterPro:IPR000582 Pfam:PF00887
PRINTS:PR00689 PROSITE:PS51228 EMBL:AE014296 Gene3D:1.20.80.10
InterPro:IPR014352 GO:GO:0000062 GeneTree:ENSGT00680000099745
InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880 HSSP:P07107
RefSeq:NP_648082.1 UniGene:Dm.23637 ProteinModelPortal:Q9VS21
SMR:Q9VS21 MINT:MINT-827374 PaxDb:Q9VS21 EnsemblMetazoa:FBtr0076913
GeneID:38782 KEGG:dme:Dmel_CG15829 UCSC:CG15829-RA
FlyBase:FBgn0035743 eggNOG:NOG311345 InParanoid:Q9VS21 OMA:FLEFYGY
OrthoDB:EOG49GJ09 PhylomeDB:Q9VS21 GenomeRNAi:38782 NextBio:810351
ArrayExpress:Q9VS21 Bgee:Q9VS21 Uniprot:Q9VS21
Length = 82
Score = 134 (52.2 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 110 KKLDSST-LLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSLGQMAKSEAMSKYIA 168
K L S L+FY YKQATVG CNI++P + E K++YNAW S + +A + YI
Sbjct: 15 KNLPSKEEFLEFYGYYKQATVGDCNIEEPE--DEEKKARYNAWKSKAGLTADDAKAYYIE 72
Query: 169 LLKEVDAGWE 178
+ K+ +E
Sbjct: 73 VYKKYAPQYE 82
>ZFIN|ZDB-GENE-040426-1861 [details] [associations]
symbol:dbi "diazepam binding inhibitor (GABA
receptor modulator, acyl-CoA binding protein)" species:7955 "Danio
rerio" [GO:0000062 "fatty-acyl-CoA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000582 Pfam:PF00887
PRINTS:PR00689 PROSITE:PS51228 ZFIN:ZDB-GENE-040426-1861
Gene3D:1.20.80.10 InterPro:IPR014352 GO:GO:0000062
InterPro:IPR022408 SUPFAM:SSF47027 PROSITE:PS00880 HSSP:P07107
HOVERGEN:HBG000398 EMBL:BC045916 EMBL:BC164432 IPI:IPI00483862
UniGene:Dr.21056 SMR:Q7ZVC7 STRING:Q7ZVC7 InParanoid:Q7ZVC7
Uniprot:Q7ZVC7
Length = 87
Score = 134 (52.2 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 27/79 (34%), Positives = 47/79 (59%)
Query: 95 EDRFNQACDYLPSLVKKLDSSTLLKFYALYKQATVGQCNIDKPSWYNMEAKSKYNAWNSL 154
E F +A + + L K + +L+ Y+LYKQATVG N +P + K+K++AW++
Sbjct: 3 EAEFLKAAEEVKQLKAKPTDAEMLEIYSLYKQATVGDVNTARPGMLDFTGKAKWDAWDAK 62
Query: 155 GQMAKSEAMSKYIALLKEV 173
+K +A+ YIA ++E+
Sbjct: 63 KGTSKEDAVKAYIAKVEEL 81
>MGI|MGI:1922638 [details] [associations]
symbol:Boll "bol, boule-like (Drosophila)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0007126
"meiosis" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008494 "translation activator activity"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0045948 "positive regulation of translational initiation"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1922638 GO:GO:0007275
GO:GO:0005737 GO:GO:0030154 GO:GO:0006417 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 CTD:66037
eggNOG:NOG260394 HOGENOM:HOG000095250 HOVERGEN:HBG048761
OrthoDB:EOG4MPHQQ EMBL:AF272859 EMBL:AK016125 EMBL:BY103870
IPI:IPI00403643 IPI:IPI00886395 RefSeq:NP_001106838.1
RefSeq:NP_083543.2 UniGene:Mm.483408 ProteinModelPortal:Q924M5
SMR:Q924M5 STRING:Q924M5 PhosphoSite:Q924M5 PRIDE:Q924M5
DNASU:75388 Ensembl:ENSMUST00000159398 GeneID:75388 KEGG:mmu:75388
UCSC:uc007bal.1 UCSC:uc007bam.1 GeneTree:ENSGT00530000063480
InParanoid:Q924M5 NextBio:342892 Bgee:Q924M5 CleanEx:MM_BOLL
Genevestigator:Q924M5 GermOnline:ENSMUSG00000025977 Uniprot:Q924M5
Length = 281
Score = 151 (58.2 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
N+IFVG + + + N+L+KFFS+YG + ++ D+ G+SKG+GF+TF+ +E K+
Sbjct: 33 NRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFITFETQEDAQKILQ 91
Query: 69 TDSHV-LEGSRLSIQPS 84
+ + +L+I P+
Sbjct: 92 EAEKLNYKDKKLNIGPA 108
>UNIPROTKB|Q9TTV2 [details] [associations]
symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:9490 "Saguinus oedipus" [GO:0030529
"ribonucleoprotein complex" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0008380 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723
GO:GO:0030529 HOVERGEN:HBG002295 HSSP:P22626 EMBL:AF192348
ProteinModelPortal:Q9TTV2 SMR:Q9TTV2 Uniprot:Q9TTV2
Length = 341
Score = 153 (58.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 28/90 (31%), Positives = 48/90 (53%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ K+FVG + + L+ +F+EYG+I ++ D+ +G +GFGFVTF + + VDK+
Sbjct: 99 VKKLFVGGIKEDTEEHHLRDYFAEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 158
Query: 68 STDSHVLEGSRLSIQPSDSHNRMAENMEDR 97
H + G ++ + S M E R
Sbjct: 159 LQKYHTINGHNAEVRKALSRQEMQEVQSSR 188
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 1 MSNSIRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNK 60
M Q K+F+G L + + L+ ++ ++G++ + VM D + S+GFGFVTF +
Sbjct: 1 MEREKEQFRKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM 60
Query: 61 EAVDKVFSTDSHVLEG 76
VD + H ++G
Sbjct: 61 AEVDAAMAARPHSIDG 76
>UNIPROTKB|F1MS42 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0005844 GeneTree:ENSGT00700000104255 OMA:GLPGSHP
EMBL:DAAA02045450 EMBL:DAAA02045451 IPI:IPI00718423
Ensembl:ENSBTAT00000012926 Uniprot:F1MS42
Length = 342
Score = 153 (58.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + L+++F ++G++ VM D T S+GFGFVTF ++ VDKV +
Sbjct: 1 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 60
Query: 70 DSHVLEGSRLSIQPSDSHNRMAE 92
H L+ +I P + R A+
Sbjct: 61 SRHELDSK--TIDPKVAFPRRAQ 81
Score = 148 (57.2 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 27/87 (31%), Positives = 51/87 (58%)
Query: 5 IRQLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVD 64
+ + KIFVG L + ++K++F ++G++ +A +MFDK T +GFGFVTF++++ V+
Sbjct: 85 VTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVE 144
Query: 65 KVFSTDSHVLEGSRLSIQPSDSHNRMA 91
KV H + + + + M+
Sbjct: 145 KVCEIHFHEINNKMVECKKAQPKEVMS 171
>UNIPROTKB|F1LM82 [details] [associations]
symbol:Hnrnpa2b1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:1310403 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662 Pfam:PF11627
GeneTree:ENSGT00700000104376 IPI:IPI00923129
Ensembl:ENSRNOT00000015325 ArrayExpress:F1LM82 Uniprot:F1LM82
Length = 312
Score = 152 (58.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 28/90 (31%), Positives = 47/90 (52%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ K+FVG + + L+ +F EYG+I ++ D+ +G +GFGFVTF + + VDK+
Sbjct: 110 VKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 169
Query: 68 STDSHVLEGSRLSIQPSDSHNRMAENMEDR 97
H + G ++ + S M E R
Sbjct: 170 LQKYHTINGHNAEVRKALSRQEMQEVQSSR 199
Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
Q K+F+G L + + L+ ++ ++G++ + VM D + S+GFGFVTF + VD
Sbjct: 18 QFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAA 77
Query: 67 FSTDSHVLEG 76
+ H ++G
Sbjct: 78 MAARPHSIDG 87
>UNIPROTKB|Q5ZJX4 [details] [associations]
symbol:RBM38 "RNA-binding protein 38" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005829 GO:GO:0005634 GO:GO:0030154
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 HOGENOM:HOG000276232 HSSP:Q9H0Z9 HOVERGEN:HBG108399
OrthoDB:EOG4DV5NS eggNOG:NOG248750 EMBL:AJ720310 IPI:IPI00586902
UniGene:Gga.5690 ProteinModelPortal:Q5ZJX4 SMR:Q5ZJX4
InParanoid:Q5ZJX4 Uniprot:Q5ZJX4
Length = 215
Score = 145 (56.1 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 25/72 (34%), Positives = 46/72 (63%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
KIFVG LP+ + + L+K+F +G I A V+ D+ TG S+G+GFVT ++ A ++
Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71
Query: 70 DSHVLEGSRLSI 81
+ +++G + ++
Sbjct: 72 PNPIIDGRKANV 83
>TAIR|locus:2019622 [details] [associations]
symbol:GR-RBP5 "AT1G74230" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005524
"ATP binding" evidence=IDA] [GO:0005507 "copper ion binding"
evidence=IDA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005507 eggNOG:COG0724
EMBL:AC020579 HSSP:Q14103 KO:K12741 EMBL:BT002037 EMBL:BT006315
IPI:IPI00516639 PIR:F96770 RefSeq:NP_177563.1 UniGene:At.18152
ProteinModelPortal:Q9C909 SMR:Q9C909 PaxDb:Q9C909 PRIDE:Q9C909
EnsemblPlants:AT1G74230.1 GeneID:843763 KEGG:ath:AT1G74230
GeneFarm:3954 TAIR:At1g74230 InParanoid:Q9C909 OMA:TERGSGF
ProtClustDB:CLSN2914559 Genevestigator:Q9C909 Uniprot:Q9C909
Length = 289
Score = 151 (58.2 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 30/83 (36%), Positives = 49/83 (59%)
Query: 1 MSNSIRQLN--KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQ 58
M SIR ++ KIFVG + ++ L++ FS+YG++++A ++ D+ TG S+GF FVTF
Sbjct: 24 MLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFT 83
Query: 59 NKEAVDKVFSTDSHVLEGSRLSI 81
+ E D L G R+ +
Sbjct: 84 STEEASNAMQLDGQDLHGRRIRV 106
>UNIPROTKB|Q5RBU8 [details] [associations]
symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:9601 "Pongo abelii" [GO:0030529 "ribonucleoprotein
complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0005654 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 GO:GO:0030529
HOVERGEN:HBG002295 CTD:3181 KO:K13158 EMBL:CR858535
RefSeq:NP_001127331.1 UniGene:Pab.19213 HSSP:P22626
ProteinModelPortal:Q5RBU8 SMR:Q5RBU8 PRIDE:Q5RBU8 GeneID:100174392
KEGG:pon:100174392 InParanoid:Q5RBU8 Uniprot:Q5RBU8
Length = 353
Score = 153 (58.9 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 28/90 (31%), Positives = 47/90 (52%)
Query: 8 LNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVF 67
+ K+FVG + + L+ +F EYG+I ++ D+ +G +GFGFVTF + + VDK+
Sbjct: 111 VKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 170
Query: 68 STDSHVLEGSRLSIQPSDSHNRMAENMEDR 97
H + G ++ + S M E R
Sbjct: 171 LQKHHTINGHNAEVRKALSRQEMQEVQSSR 200
Score = 126 (49.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 7 QLNKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
Q K+F+G L + + L+ ++ ++G++ + VM D + S+GFGFVTF + VD
Sbjct: 19 QFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAA 78
Query: 67 FSTDSHVLEG 76
+ H ++G
Sbjct: 79 MAARPHSIDG 88
>RGD|1559527 [details] [associations]
symbol:Boll "bol, boule-like (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0007126 "meiosis"
evidence=IEA;ISO] [GO:0008494 "translation activator activity"
evidence=IEA;ISO] [GO:0045948 "positive regulation of translational
initiation" evidence=IEA;ISO] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1559527
GO:GO:0007126 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0008494 CTD:66037 OrthoDB:EOG4MPHQQ GO:GO:0045948
GeneTree:ENSGT00530000063480 EMBL:CH473965 EMBL:AC103419
EMBL:AC122091 IPI:IPI00884580 RefSeq:NP_001106841.1
RefSeq:XP_003750748.1 UniGene:Rn.145717 Ensembl:ENSRNOT00000021299
GeneID:100911373 GeneID:501143 KEGG:rno:100911373 KEGG:rno:501143
UCSC:RGD:1559527 NextBio:708414 Uniprot:D4ACT7
Length = 293
Score = 151 (58.2 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 9 NKIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFS 68
N+IFVG + + + N+L+KFFS+YG + ++ D+ G+SKG+GF+TF+ +E K+
Sbjct: 45 NRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFITFETQEDAQKILQ 103
Query: 69 TDSHV-LEGSRLSIQPS 84
+ + +L+I P+
Sbjct: 104 EAEKLNYKDKKLNIGPA 120
>SGD|S000005483 [details] [associations]
symbol:HRP1 "Subunit of cleavage factor I" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0006378 "mRNA polyadenylation" evidence=IMP;IDA]
[GO:0005849 "mRNA cleavage factor complex" evidence=IPI]
[GO:0006379 "mRNA cleavage" evidence=IDA] [GO:0003729 "mRNA
binding" evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 SGD:S000005483
EMBL:BK006948 GO:GO:0000184 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0010494 eggNOG:COG0724
GO:GO:0006379 GO:GO:0005849 KO:K14411 GeneTree:ENSGT00700000104255
EMBL:U35737 EMBL:U38535 EMBL:X95258 EMBL:Z74865 PIR:S66820
RefSeq:NP_014518.1 PDB:2CJK PDB:2KM8 PDBsum:2CJK PDBsum:2KM8
ProteinModelPortal:Q99383 SMR:Q99383 DIP:DIP-1371N IntAct:Q99383
MINT:MINT-395353 STRING:Q99383 PaxDb:Q99383 PeptideAtlas:Q99383
EnsemblFungi:YOL123W GeneID:853997 KEGG:sce:YOL123W CYGD:YOL123w
HOGENOM:HOG000248803 OMA:AREEQDK OrthoDB:EOG4TF3VC
EvolutionaryTrace:Q99383 NextBio:975491 Genevestigator:Q99383
GermOnline:YOL123W Uniprot:Q99383
Length = 534
Score = 156 (60.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKVFST 69
K+F+G L W + + L+++F +YG + + +M D TG S+GFGF++F+ +VD+V T
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 70 DSHVLEG 76
H+L+G
Sbjct: 220 Q-HILDG 225
Score = 154 (59.3 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 29/57 (50%), Positives = 43/57 (75%)
Query: 10 KIFVGNLPWTVSHNELKKFFSEYGQIMNASVMFDKNTGLSKGFGFVTFQNKEAVDKV 66
KIFVG + V E ++FFS++G I++A +M DK+TG S+GFGFVT+ + +AVD+V
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRV 300
WARNING: HSPs involving 877 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.129 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 347 347 0.00098 116 3 11 23 0.47 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1127
No. of states in DFA: 616 (65 KB)
Total size of DFA: 268 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.18u 0.09s 38.27t Elapsed: 00:00:17
Total cpu time: 38.21u 0.09s 38.30t Elapsed: 00:00:17
Start: Thu Aug 15 13:50:58 2013 End: Thu Aug 15 13:51:15 2013
WARNINGS ISSUED: 2