Diaphorina citri psyllid: psy6303


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
MGPHIVDTVHRRELVKKQEDLKRTNRALVDFLSANRDKNFVKSHGRQRQDYLFRELLSLELRLPNVRLSRRRQATIWGGASLVTILLDSMQQLLESGWRWDFIVNLSESDYPVKTNRALVDFLSANRDKNFVKSHGRQVHRFISKQGLDKSFVECEARMWRVGDRTLPQGIVMDGGSGTGWLLSPIFVSYVASPEKDELVRGLLNPIQSTPLLPAELLMEQLANAGIVMDGGSDWLVLSRSFVSYVASPEKDELVRGLLTLFKYTLLPAE
ccccEEEEEEHHHHHHcHHHHHHHHHHHHHHHHHcccccEEEEEECccccHHHHHHHHHHcccccEEEEcccccEEEccHHHHHHHHHHHHHHHHccccccEEEEccccccccccHHHHHHHHHHcccccccccccccccEEEEEcccccccEEEEEEEEECcccccccccccccccCEEEEEcHHHHHHHccccccHHHHHHHccccccccccHHHHHHHHcccccccccccccEEccccccccccccccHHHHHHHHHHHHccccccc
***HIVDTVHRRELVKKQEDLKRTNRALVDFLSANRDKNFVKSHGRQRQDYLFRELLSLELRLPNVRLSRRRQATIWGGASLVTILLDSMQQLLESGWRWDFIVNLSESDYPVKTNRALVDFLSANRDKNFVKSHGRQVHRFISKQGLDKSFVECEARMWRVGDRTLPQGIVMDGGSGTGWLLSPIFVSYVASPEKDELVRGLLNPIQSTPLLPAELLMEQLANAGIVMDGGSDWLVLSRSFVSYVASPEKDELVRGLLTLFKYTLLP**
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MGPHIVDTVHRRELVKKQEDLKRTNRALVDFLSANRDKNFVKSHGRQRQDYLFRELLSLELRLPNVRLSRRRQATIWGGASLVTILLDSMQQLLESGWRWDFIVNLSESDYPVKTNRALVDFLSANRDKNFVKSHGRQVHRFISKQGLDKSFVECEARMWRVGDRTLPQGIVMDGGSGTGWLLSPIFVSYVASPEKDELVRGLLNPIQSTPLLPAELLMEQLANAGIVMDGGSDWLVLSRSFVSYVASPEKDELVRGLLTLFKYTLLPAE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Xylosyltransferase 2 Probably catalyzes the first step in biosynthesis of glycosaminoglycan. Transfers D-xylose from UDP-D-xylose to specific serine residues of the core protein. Initial enzyme in the biosynthesis of chondroitin sulfate and dermatan sulfate proteoglycans in fibroblasts and chondrocytes.confidentQ9EPI0
Xylosyltransferase oxt Catalyzes the first step in biosynthesis of glycosaminoglycan. Transfers D-xylose from UDP-D-xylose to specific serine residues of the core protein. Initial enzyme in the biosynthesis of chondroitin sulfate and dermatan sulfate proteoglycans in fibroblasts and chondrocytes.confidentQ5QQ53
Xylosyltransferase oxt Catalyzes the first step in biosynthesis of glycosaminoglycan. Transfers D-xylose from UDP-D-xylose to specific serine residues of the core protein. Initial enzyme in the biosynthesis of chondroitin sulfate and dermatan sulfate proteoglycans in fibroblasts and chondrocytes.confidentQ7KVA1

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0050650 [BP]chondroitin sulfate proteoglycan biosynthetic processprobableGO:0030203, GO:0044249, GO:0006807, GO:0044237, GO:0034645, GO:0009100, GO:0009101, GO:1901576, GO:0044710, GO:0044260, GO:0071704, GO:0009987, GO:0030166, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0043436, GO:0044238, GO:1901564, GO:1901566, GO:0006082, GO:0044272, GO:1901137, GO:1901135, GO:0050654, GO:0043170, GO:0019538, GO:0006029, GO:0006790, GO:0006022, GO:0006023, GO:0006024, GO:0044281
GO:0042732 [BP]D-xylose metabolic processprobableGO:0019321, GO:0044238, GO:0005975, GO:0005996, GO:0071704, GO:0008150, GO:0008152, GO:0044723

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2GAK, chain A
Confidence level:very confident
Coverage over the Query: 15-163,174-176,190,203-211,223-270
View the alignment between query and template
View the model in PyMOL
Template: 3OTK, chain A
Confidence level:probable
Coverage over the Query: 65-218
View the alignment between query and template
View the model in PyMOL