Your job contains 1 sequence.
>psy6304
MFPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFE
QDCEGVKPYQSFPTGSHPPRYQPCKTLLNFRDLSGLPPRPKEDIDFRHVTFGTMSESLQR
EVSLFQTVPKPEQFHKYPEMDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGVYLSNQ
VSPDLTGPPTSQSAALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYT
MSAHNPYYDQMEKNPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRRLLDC
TYCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPER
IVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQASLENKQNVK
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6304
(407 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q17DK5 - symbol:cry "Cryptochrome-1" species:71... 521 6.8e-91 3
UNIPROTKB|Q7PYI7 - symbol:Cry1 "Cryptochrome-1" species:7... 520 6.0e-88 3
FB|FBgn0025680 - symbol:cry "cryptochrome" species:7227 "... 499 4.5e-82 3
UNIPROTKB|Q293P8 - symbol:cry "Cryptochrome-1" species:46... 486 7.3e-82 3
UNIPROTKB|B0WRR9 - symbol:cry "Cryptochrome-1" species:71... 527 3.7e-72 2
RGD|620935 - symbol:Cry2 "cryptochrome 2 (photolyase-like... 327 5.6e-66 3
UNIPROTKB|Q923I8 - symbol:Cry2 "Cryptochrome-2" species:1... 327 5.6e-66 3
ZFIN|ZDB-GENE-010426-6 - symbol:cry3 "cryptochrome 3" spe... 315 2.8e-65 3
UNIPROTKB|E2RMX4 - symbol:CRY1 "Uncharacterized protein" ... 306 5.8e-65 3
UNIPROTKB|Q16526 - symbol:CRY1 "Cryptochrome-1" species:9... 303 1.3e-64 3
RGD|735083 - symbol:Cry1 "cryptochrome 1 (photolyase-like... 303 1.3e-64 3
UNIPROTKB|Q32Q86 - symbol:Cry1 "Cryptochrome-1" species:1... 303 1.3e-64 3
MGI|MGI:1270841 - symbol:Cry1 "cryptochrome 1 (photolyase... 303 1.7e-64 3
UNIPROTKB|Q8WP19 - symbol:CRY1 "Cryptochrome-1" species:9... 302 2.1e-64 3
MGI|MGI:1270859 - symbol:Cry2 "cryptochrome 2 (photolyase... 317 3.4e-64 3
UNIPROTKB|F1NX44 - symbol:CRY2 "Cryptochrome-2" species:9... 312 4.0e-64 3
UNIPROTKB|F1SPQ5 - symbol:CRY1 "Uncharacterized protein" ... 306 5.3e-64 3
UNIPROTKB|Q49AN0 - symbol:CRY2 "Cryptochrome-2" species:9... 315 5.8e-64 3
UNIPROTKB|Q8QG60 - symbol:CRY2 "Cryptochrome-2" species:9... 313 6.3e-64 3
UNIPROTKB|F1P3P5 - symbol:CRY2 "Cryptochrome-2" species:9... 312 6.9e-64 3
UNIPROTKB|Q70AD6 - symbol:CRY1 "Cryptochrome-1" species:1... 302 7.1e-64 3
UNIPROTKB|F1SHJ9 - symbol:CRY2 "Uncharacterized protein" ... 318 7.6e-64 3
UNIPROTKB|B4DZD6 - symbol:CRY2 "Cryptochrome-2" species:9... 315 8.3e-64 3
UNIPROTKB|F1NYE9 - symbol:CRY1 "Cryptochrome-1" species:9... 306 2.3e-63 3
UNIPROTKB|Q8QG61 - symbol:CRY1 "Cryptochrome-1" species:9... 306 2.3e-63 3
UNIPROTKB|E1C2Z9 - symbol:CRY1 "Cryptochrome-1" species:9... 306 2.4e-63 3
ZFIN|ZDB-GENE-010426-3 - symbol:cry1b "cryptochrome 1b" s... 314 3.2e-63 3
UNIPROTKB|F1PNC9 - symbol:CRY2 "Uncharacterized protein" ... 313 3.3e-63 3
ZFIN|ZDB-GENE-010426-2 - symbol:cry1a "cryptochrome 1a" s... 303 2.6e-62 3
ZFIN|ZDB-GENE-010426-4 - symbol:cry2a "cryptochrome 2a" s... 296 2.4e-59 3
UNIPROTKB|F1MXB2 - symbol:CRY1 "Uncharacterized protein" ... 306 1.2e-57 3
UNIPROTKB|F1N0J9 - symbol:Bt.20450 "Uncharacterized prote... 320 1.1e-54 3
ZFIN|ZDB-GENE-010426-7 - symbol:cry4 "cryptochrome 4" spe... 272 2.9e-52 3
ZFIN|ZDB-GENE-010426-5 - symbol:cry2b "cryptochrome 2b" s... 262 1.6e-51 3
FB|FBgn0016054 - symbol:phr6-4 "(6-4)-photolyase" species... 288 1.1e-50 3
ZFIN|ZDB-GENE-010426-8 - symbol:cry5 "cryptochrome 5" spe... 254 2.9e-50 3
TAIR|locus:2093217 - symbol:UVR3 "UV REPAIR DEFECTIVE 3" ... 255 5.8e-49 3
UNIPROTKB|Q2TV23 - symbol:LOC395100 "Cryptochrome-like pr... 305 1.0e-47 2
UNIPROTKB|F1P5X2 - symbol:LOC395100 "Uncharacterized prot... 305 1.4e-47 2
UNIPROTKB|G4MNA0 - symbol:MGG_02071 "Cryptochrome-1" spec... 144 1.2e-26 4
TIGR_CMR|BA_3180 - symbol:BA_3180 "deoxyribodipyrimidine ... 157 3.2e-19 2
TIGR_CMR|CBU_1176 - symbol:CBU_1176 "deoxyribodipyrimidin... 148 1.4e-17 2
UNIPROTKB|Q7T3R1 - symbol:LOC395100 "Uncharacterized prot... 152 9.0e-17 2
ZFIN|ZDB-GENE-040617-2 - symbol:cry-dash "cryptochrome DA... 166 5.1e-12 2
UNIPROTKB|Q9KNA8 - symbol:phrA "Deoxyribodipyrimidine pho... 122 1.2e-11 2
TIGR_CMR|VC_A0057 - symbol:VC_A0057 "deoxyribodipyrimidin... 122 1.2e-11 2
UNIPROTKB|P00914 - symbol:phr "deoxyribodipyrimidine phot... 119 1.3e-11 2
TIGR_CMR|SO_3384 - symbol:SO_3384 "deoxyribodipyrimidine ... 137 1.5e-11 2
TAIR|locus:2138728 - symbol:CRY1 "cryptochrome 1" species... 122 1.1e-10 2
ZFIN|ZDB-GENE-120215-243 - symbol:si:ch73-25i22.2 "si:ch7... 129 2.3e-10 2
ASPGD|ASPL0000053661 - symbol:cryA species:162425 "Emeric... 112 1.4e-09 2
TAIR|locus:2018254 - symbol:CRY2 "cryptochrome 2" species... 122 3.8e-09 2
UNIPROTKB|Q9KR33 - symbol:cry1 "Cryptochrome DASH" specie... 142 1.1e-06 1
TIGR_CMR|VC_1814 - symbol:VC_1814 "RNA-binding cryptochro... 142 1.1e-06 1
UNIPROTKB|Q48MU1 - symbol:phrB "Deoxyribodipyrimidine pho... 97 3.7e-06 2
TIGR_CMR|CPS_1380 - symbol:CPS_1380 "deoxyribodipyrimidin... 106 4.7e-06 2
TIGR_CMR|SPO_1917 - symbol:SPO_1917 "deoxyribodipyrimidin... 117 0.00071 1
>UNIPROTKB|Q17DK5 [details] [associations]
symbol:cry "Cryptochrome-1" species:7159 "Aedes aegypti"
[GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005641
"nuclear envelope lumen" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009785 "blue light signaling pathway"
evidence=ISS] [GO:0009882 "blue light photoreceptor activity"
evidence=ISS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0050660 GO:GO:0006281
GO:GO:0006351 GO:GO:0005641 GO:GO:0042752 GO:GO:0048511
GO:GO:0000060 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:CH477293 RefSeq:XP_001648498.1 UniGene:Aae.11304 STRING:Q17DK5
EnsemblMetazoa:AAEL004146-RA GeneID:5564182
KEGG:aag:AaeL_AAEL004146 VectorBase:AAEL004146 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 OMA:QMFLHTV OrthoDB:EOG437PW2
PhylomeDB:Q17DK5 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 Uniprot:Q17DK5
Length = 545
Score = 521 (188.5 bits), Expect = 6.8e-91, Sum P(3) = 6.8e-91
Identities = 118/236 (50%), Positives = 143/236 (60%)
Query: 68 PYQSFPT-GSHPP-RYQPCKTLLNFRDLSGLPPRPKEDIDFRHVTFGTMSESLQREVSLF 125
P Q T G PP YQ L+ D+ G PPRP F V FG++ L +EV L
Sbjct: 141 PQQIIRTNGGIPPLTYQ---MFLHTVDIIGKPPRPVAAPSFEFVEFGSIPSILAQEVKLQ 197
Query: 126 QTVP-KPEQFHKYPEMDFGDPLI---RWLGGETEALIKLNERLSQEIESFKSGVYLSNQV 181
Q PE F Y E G+P I +W+GGET+AL L RL QE E+F G +L Q
Sbjct: 198 QVRNLSPEDFGIYYE---GNPDISHQQWMGGETKALECLGHRLKQEEEAFLGGYFLPTQA 254
Query: 182 SPDLTGPPTSQSAALKFGCLSVRRFYWALHDHFNTI---HEGRPPSHFNITGQLIWREYF 238
P+ PPTS SAAL+FGCLSVR FYW +HD + + ++ R P +ITGQLIWREYF
Sbjct: 255 KPEFLVPPTSMSAALRFGCLSVRMFYWCVHDLYEKVQANNQYRNPGGQHITGQLIWREYF 314
Query: 239 YTMSAHNPYYDQMEKNPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQL 294
YTMS HNP+Y +ME NPICLNIPW P K+ L+ WK G+TG+P IDA MRQL
Sbjct: 315 YTMSVHNPHYAEMEANPICLNIPWY---EP-KDDSLDRWKEGRTGFPMIDAAMRQL 366
Score = 218 (81.8 bits), Expect = 6.8e-91, Sum P(3) = 6.8e-91
Identities = 36/76 (47%), Positives = 52/76 (68%)
Query: 296 RLLDCTYCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISK 355
+LLD + C P+ RRLDP G Y++RY+PEL+ P Y++EPWKAPL VQ++ CI+ +
Sbjct: 426 KLLDSSSCTSPIALARRLDPKGEYVRRYLPELKNLPTLYVHEPWKAPLDVQKECGCIVGR 485
Query: 356 DYPERIVNHVQASLEN 371
DYP +++ AS N
Sbjct: 486 DYPAPMIDLAAASRAN 501
Score = 200 (75.5 bits), Expect = 6.8e-91, Sum P(3) = 6.8e-91
Identities = 35/63 (55%), Positives = 49/63 (77%)
Query: 4 GTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQDC 63
GT +G+NR +FLLE LADLDRQL+ GGQL++ +G+ +++ ++L ELN KLCFEQDC
Sbjct: 49 GTKLVGFNRMKFLLESLADLDRQLREIGGQLYVFKGNAVNVMRRLFEELNIRKLCFEQDC 108
Query: 64 EGV 66
E +
Sbjct: 109 EPI 111
Score = 50 (22.7 bits), Expect = 2.9e-73, Sum P(3) = 2.9e-73
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 377 KEKANCIINKDYPERIVNHVQASLEN 402
+++ CI+ +DYP +++ AS N
Sbjct: 476 QKECGCIVGRDYPAPMIDLAAASRAN 501
>UNIPROTKB|Q7PYI7 [details] [associations]
symbol:Cry1 "Cryptochrome-1" species:7165 "Anopheles
gambiae" [GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005641
"nuclear envelope lumen" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009785 "blue light signaling pathway"
evidence=ISS] [GO:0009882 "blue light photoreceptor activity"
evidence=ISS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0050660 GO:GO:0006281
GO:GO:0006351 GO:GO:0005641 GO:GO:0042752 GO:GO:0048511
GO:GO:0000060 EMBL:AAAB01008987 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
OMA:QMFLHTV OrthoDB:EOG437PW2 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 EMBL:DQ219482
RefSeq:XP_321104.4 ProteinModelPortal:Q7PYI7 STRING:Q7PYI7
EnsemblMetazoa:AGAP001958-RA GeneID:1281165
KEGG:aga:AgaP_AGAP001958 VectorBase:AGAP001958 CTD:1281165
InParanoid:Q0QW08 PhylomeDB:Q7PYI7 Uniprot:Q7PYI7
Length = 545
Score = 520 (188.1 bits), Expect = 6.0e-88, Sum P(3) = 6.0e-88
Identities = 117/259 (45%), Positives = 149/259 (57%)
Query: 49 KRELNFTKLCFEQD--C-EGVK-----PYQSFPT-GSHPP-RYQPCKTLLNFRDLSGLPP 98
+R+ KLC D C E V P + T G PP YQ L+ ++ G PP
Sbjct: 116 ERDDAVAKLCRTMDVRCVENVSHTLWNPIEVIQTNGDIPPLTYQ---MFLHTVNIIGDPP 172
Query: 99 RPKEDIDFRHVTFGTMSESLQREVSLFQTVPKPEQFHKYPEMDFGDPLIRWLGGETEALI 158
RP +F +V FG + L E+ L Q +P P+ F + + + +W+GGET AL
Sbjct: 173 RPVGAPNFEYVEFGRVPALLASELKLCQQMPAPDDFGIHYDGNARIAFQKWIGGETRALE 232
Query: 159 KLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQSAALKFGCLSVRRFYWALHDHFNTIH 218
L RL QE E+F+ G YL Q P++ GP TS SAAL+FGCLSVR FYW +HD F +
Sbjct: 233 ALGARLKQEEEAFREGYYLPTQAKPEILGPATSMSAALRFGCLSVRMFYWCVHDLFAKVQ 292
Query: 219 EG---RPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNIPWLPESHPNKEKYLN 275
+ P +ITGQLIWREYFYTMS NP+Y +ME+NPICLNIPW P + L
Sbjct: 293 SNSQFKYPGGHHITGQLIWREYFYTMSVQNPHYGEMERNPICLNIPWYK---PEDDS-LT 348
Query: 276 AWKNGQTGYPFIDAVMRQL 294
WK G+TG+P IDA MRQL
Sbjct: 349 RWKEGRTGFPMIDAAMRQL 367
Score = 198 (74.8 bits), Expect = 6.0e-88, Sum P(3) = 6.0e-88
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 296 RLLDCTYCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISK 355
RLLD + C CP+ RRLDP G Y+KRY+PEL +P Q+++EPWKA Q + C+I +
Sbjct: 427 RLLDSSKCTCPIALARRLDPKGDYVKRYLPELANYPAQFVHEPWKASREQQIEYGCVIGE 486
Query: 356 DYPERIVNHVQASLEN 371
YP +V+ S N
Sbjct: 487 KYPAPMVDLAIVSKRN 502
Score = 193 (73.0 bits), Expect = 6.0e-88, Sum P(3) = 6.0e-88
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 4 GTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQDC 63
GT +GYNR +FLLE LADLDRQ + GGQL + +G +++ ++L ELN KLC+EQDC
Sbjct: 51 GTRIVGYNRMKFLLESLADLDRQFRDLGGQLLVFRGDSVTVLRRLFEELNIKKLCYEQDC 110
Query: 64 EGV 66
E +
Sbjct: 111 EPI 113
Score = 39 (18.8 bits), Expect = 2.9e-71, Sum P(3) = 2.9e-71
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 356 DYPERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQASLEN 402
+YP + V H +Q ++ C+I + YP +V+ S N
Sbjct: 460 NYPAQFV-HEPWKASREQQIEY---GCVIGEKYPAPMVDLAIVSKRN 502
>FB|FBgn0025680 [details] [associations]
symbol:cry "cryptochrome" species:7227 "Drosophila
melanogaster" [GO:0007623 "circadian rhythm"
evidence=IGI;IEP;IMP;NAS;TAS;IPI] [GO:0009882 "blue light
photoreceptor activity" evidence=IMP] [GO:0003913 "DNA photolyase
activity" evidence=ISS;IMP] [GO:0009785 "blue light signaling
pathway" evidence=IMP] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IMP;IDA] [GO:0008020 "G-protein coupled
photoreceptor activity" evidence=ISS] [GO:0009588 "UV-A, blue light
phototransduction" evidence=ISS] [GO:0009881 "photoreceptor
activity" evidence=IMP;NAS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0043234 "protein complex"
evidence=IPI] [GO:0005641 "nuclear envelope lumen" evidence=IDA]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IMP;TAS] [GO:0009649 "entrainment of circadian clock"
evidence=IDA;IMP] [GO:0042332 "gravitaxis" evidence=IMP]
[GO:0009637 "response to blue light" evidence=NAS;TAS] [GO:0006281
"DNA repair" evidence=IEA] [GO:0043153 "entrainment of circadian
clock by photoperiod" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0042752 "regulation of circadian rhythm" evidence=IMP;IDA]
[GO:0045475 "locomotor rhythm" evidence=IMP] [GO:0007602
"phototransduction" evidence=IMP] [GO:0050980 "detection of light
stimulus involved in magnetoreception" evidence=IMP] [GO:0071000
"response to magnetism" evidence=IMP] [GO:0050958
"magnetoreception" evidence=IMP] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 EMBL:AE014297 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0043234 GO:GO:0050660
GO:GO:0006281 GO:GO:0006351 GO:GO:0005641 GO:GO:0000060
GO:GO:0045475 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0007602 GO:GO:0043153 eggNOG:COG0415 KO:K02295 OMA:QMFLHTV
OrthoDB:EOG437PW2 GO:GO:0009882 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AF099734 EMBL:AB018400 EMBL:AB019389
EMBL:AY051514 RefSeq:NP_732407.1 UniGene:Dm.4579 PDB:4GU5
PDBsum:4GU5 ProteinModelPortal:O77059 SMR:O77059 DIP:DIP-29424N
IntAct:O77059 MINT:MINT-1328097 STRING:O77059 PaxDb:O77059
PRIDE:O77059 EnsemblMetazoa:FBtr0083736 GeneID:42305
KEGG:dme:Dmel_CG3772 UCSC:CG3772-RA FlyBase:FBgn0025680
GeneTree:ENSGT00500000044813 InParanoid:O77059 PhylomeDB:O77059
GenomeRNAi:42305 NextBio:828142 Bgee:O77059 GO:GO:0050980
GO:GO:0042332 GO:GO:0071000 Uniprot:O77059
Length = 542
Score = 499 (180.7 bits), Expect = 4.5e-82, Sum P(3) = 4.5e-82
Identities = 109/228 (47%), Positives = 137/228 (60%)
Query: 75 GSHPP-RYQPCKTLLNFRDLSGLPPRPKEDIDFRHVTFGTMSESLQREVSLFQTVPKPEQ 133
G PP YQ L+ + GLPPRP D TF + R + LF+ +P PE
Sbjct: 151 GGIPPLTYQ---MFLHTVQIIGLPPRPTADARLEDATFVELDPEFCRSLKLFEQLPTPEH 207
Query: 134 FHKYPE-MDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQ 192
F+ Y + M F I W GGET+AL+ L+ERL E +F+ G YL NQ P++ P S
Sbjct: 208 FNVYGDNMGFLAK-INWRGGETQALLLLDERLKVEQHAFERGFYLPNQALPNIHDSPKSM 266
Query: 193 SAALKFGCLSVRRFYWALHDHFNTIH-----EG-RPPSHFNITGQLIWREYFYTMSAHNP 246
SA L+FGCLSVRRFYW++HD F + G + +ITGQLIWREYFYTMS +NP
Sbjct: 267 SAHLRFGCLSVRRFYWSVHDLFKNVQLRACVRGVQMTGGAHITGQLIWREYFYTMSVNNP 326
Query: 247 YYDQMEKNPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQL 294
YD+ME N ICL+IPW + PN E L +W+ GQTG+P ID MRQL
Sbjct: 327 NYDRMEGNDICLSIPW---AKPN-ENLLQSWRLGQTGFPLIDGAMRQL 370
Score = 201 (75.8 bits), Expect = 4.5e-82, Sum P(3) = 4.5e-82
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 296 RLLDCTYCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISK 355
RLLD + CPV +RLDPDG YIK+YVPEL P ++++EPW+ QE+ C+I
Sbjct: 430 RLLDSSLVTCPVALAKRLDPDGTYIKQYVPELMNVPKEFVHEPWRMSAEQQEQYECLIGV 489
Query: 356 DYPERIVNHVQASLENKQYLKKEKANCI 383
YPERI++ A N +K + + I
Sbjct: 490 HYPERIIDLSMAVKRNMLAMKSLRNSLI 517
Score = 155 (59.6 bits), Expect = 4.5e-82, Sum P(3) = 4.5e-82
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 4 GTMHIGYNRFRFLLECLADLDRQLKS--HG-GQLFIVQGSPISIFQKLKRELNFTKLCFE 60
GT ++GYNR RFLL+ L D+D QL++ G G+L + +G P IF++L ++ ++C E
Sbjct: 48 GTKNVGYNRMRFLLDSLQDIDDQLQAATDGRGRLLVFEGEPAYIFRRLHEQVRLHRICIE 107
Query: 61 QDCEGV 66
QDCE +
Sbjct: 108 QDCEPI 113
Score = 52 (23.4 bits), Expect = 1.9e-66, Sum P(3) = 1.9e-66
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 376 KKEKANCIINKDYPERIVNHVQASLENKQNVK 407
++E+ C+I YPERI++ A N +K
Sbjct: 479 QQEQYECLIGVHYPERIIDLSMAVKRNMLAMK 510
>UNIPROTKB|Q293P8 [details] [associations]
symbol:cry "Cryptochrome-1" species:46245 "Drosophila
pseudoobscura pseudoobscura" [GO:0000060 "protein import into
nucleus, translocation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005641 "nuclear envelope lumen" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0009785 "blue light
signaling pathway" evidence=ISS] [GO:0009882 "blue light
photoreceptor activity" evidence=ISS] [GO:0042752 "regulation of
circadian rhythm" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737 GO:GO:0048471
GO:GO:0045892 GO:GO:0050660 GO:GO:0006281 GO:GO:0006351
GO:GO:0005641 GO:GO:0042752 GO:GO:0048511 GO:GO:0000060
EMBL:CM000070 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
GenomeReviews:CM000070_GR eggNOG:COG0415 KO:K02295
OrthoDB:EOG437PW2 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 RefSeq:XP_001360014.2
GeneID:4803241 KEGG:dpo:Dpse_GA17677 FlyBase:FBgn0077687
InParanoid:Q293P8 Uniprot:Q293P8
Length = 540
Score = 486 (176.1 bits), Expect = 7.3e-82, Sum P(3) = 7.3e-82
Identities = 107/228 (46%), Positives = 135/228 (59%)
Query: 75 GSHPP-RYQPCKTLLNFRDLSGLPPRPKEDIDFRHVTFGTMSESLQREVSLFQTVPKPEQ 133
G PP YQ L+ + G+PPRP D TF ++ L++ + F VP PE
Sbjct: 151 GGIPPLTYQ---MFLHTVQIIGVPPRPAIDAHINDATFIQLAPELRQHLGCFDQVPNPEH 207
Query: 134 FHKYPE-MDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQ 192
F+ Y + M F I W GGET+AL L ERL E +F+ G YL NQ +P++ P S
Sbjct: 208 FNIYSDNMGFLAK-INWRGGETQALALLEERLKVERNAFERGYYLPNQANPNIQEAPKSM 266
Query: 193 SAALKFGCLSVRRFYWALHDHFNTIH-----EG-RPPSHFNITGQLIWREYFYTMSAHNP 246
SA L+FGCLSVRRFYW++HD F + G + +ITGQLIWREYFYTMS +NP
Sbjct: 267 SAHLRFGCLSVRRFYWSVHDLFENVQLAACVRGVQIEGGAHITGQLIWREYFYTMSVNNP 326
Query: 247 YYDQMEKNPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQL 294
YD+ME N ICL IPW + P+ E L W+ GQTG+P ID MRQL
Sbjct: 327 NYDRMEGNEICLTIPW---AKPD-ENLLQRWRLGQTGFPLIDGAMRQL 370
Score = 206 (77.6 bits), Expect = 7.3e-82, Sum P(3) = 7.3e-82
Identities = 37/76 (48%), Positives = 50/76 (65%)
Query: 296 RLLDCTYCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISK 355
RLLD + CPV +RLDP+G+YI+RYVPEL+ P +YI+EPW+ Q K C+I
Sbjct: 430 RLLDSSLVTCPVALAKRLDPEGVYIRRYVPELKNLPKEYIHEPWRLSAEQQVKFECLIGV 489
Query: 356 DYPERIVNHVQASLEN 371
YPERI++ +A N
Sbjct: 490 HYPERIIDLSKAVKRN 505
Score = 161 (61.7 bits), Expect = 7.3e-82, Sum P(3) = 7.3e-82
Identities = 32/66 (48%), Positives = 44/66 (66%)
Query: 4 GTMHIGYNRFRFLLECLADLDRQLKS--HG-GQLFIVQGSPISIFQKLKRELNFTKLCFE 60
GT +GYNR RFLL+ L DLD QL+S G G+LF+ +G P IF++L ++ K+C E
Sbjct: 48 GTKSVGYNRMRFLLDSLQDLDEQLQSATEGRGRLFVFEGEPTLIFRRLHEQVRLHKICAE 107
Query: 61 QDCEGV 66
DCE +
Sbjct: 108 LDCEPI 113
Score = 55 (24.4 bits), Expect = 5.0e-66, Sum P(3) = 5.0e-66
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 355 KDYPERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQASLEN 402
K+ P+ + H L +Q +K E C+I YPERI++ +A N
Sbjct: 462 KNLPKEYI-HEPWRLSAEQQVKFE---CLIGVHYPERIIDLSKAVKRN 505
>UNIPROTKB|B0WRR9 [details] [associations]
symbol:cry "Cryptochrome-1" species:7176 "Culex
quinquefasciatus" [GO:0000060 "protein import into nucleus,
translocation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005641 "nuclear envelope lumen" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0009785 "blue light signaling
pathway" evidence=ISS] [GO:0009882 "blue light photoreceptor
activity" evidence=ISS] [GO:0042752 "regulation of circadian
rhythm" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 GO:GO:0005737 GO:GO:0048471 GO:GO:0045892
GO:GO:0050660 GO:GO:0006281 GO:GO:0006351 GO:GO:0005641
GO:GO:0042752 GO:GO:0048511 GO:GO:0000060 GO:GO:0018298
eggNOG:COG0415 KO:K02295 OrthoDB:EOG437PW2 GO:GO:0009882
GO:GO:0003913 SUPFAM:SSF48173 EMBL:DS232059 RefSeq:XP_001851403.1
UniGene:Cpi.12243 EnsemblMetazoa:CPIJ009455-RA GeneID:6042266
KEGG:cqu:CpipJ_CPIJ009455 VectorBase:CPIJ009455 PhylomeDB:B0WRR9
Uniprot:B0WRR9
Length = 499
Score = 527 (190.6 bits), Expect = 3.7e-72, Sum P(2) = 3.7e-72
Identities = 106/206 (51%), Positives = 126/206 (61%)
Query: 92 DLSGLPPRPKEDIDFRHVTFGTMSESLQREVSLFQTVPKPEQFHKYPEMDFGDPLIRWLG 151
++ G PPRP F V FG + L E+ LFQ P PE F Y E + RW G
Sbjct: 119 NIIGEPPRPVGAPSFEFVEFGRLPSILSTELKLFQRAPVPEDFGIYYEGNADIARQRWTG 178
Query: 152 GETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQSAALKFGCLSVRRFYWALH 211
GE +AL L RL QE E+F+ G YL Q PD PP+S SAAL+FGCLSVR FYW +H
Sbjct: 179 GEAKALELLGRRLKQEEEAFREGYYLPTQARPDFLAPPSSMSAALRFGCLSVRMFYWCVH 238
Query: 212 DHFNTIHEG---RPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNIPWLPESHP 268
D F + + P +ITGQLIWREYFYTMS HNP+Y ME NPICLNIPW +
Sbjct: 239 DLFARVQANNQLKHPGGHHITGQLIWREYFYTMSVHNPHYAVMELNPICLNIPW----YE 294
Query: 269 NKEKYLNAWKNGQTGYPFIDAVMRQL 294
K+ L+ WK G+TG+P IDA MRQL
Sbjct: 295 AKDDSLDRWKEGRTGFPLIDAAMRQL 320
Score = 221 (82.9 bits), Expect = 3.7e-72, Sum P(2) = 3.7e-72
Identities = 42/86 (48%), Positives = 55/86 (63%)
Query: 296 RLLDCTYCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISK 355
+LLD + C PV RRLDP G Y+KRY+PEL +FP Y++EPWKAP +QE+ C+I K
Sbjct: 380 KLLDSSSCTSPVALARRLDPKGEYVKRYLPELEKFPALYVHEPWKAPPELQEQYGCVIGK 439
Query: 356 DYPERIVN--HVQASLENKQYLKKEK 379
DYP +VN V NK ++K
Sbjct: 440 DYPAPMVNLAEVNKCNANKMNAIRQK 465
Score = 58 (25.5 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 377 KEKANCIINKDYPERIVN--HVQASLENKQN 405
+E+ C+I KDYP +VN V NK N
Sbjct: 430 QEQYGCVIGKDYPAPMVNLAEVNKCNANKMN 460
>RGD|620935 [details] [associations]
symbol:Cry2 "cryptochrome 2 (photolyase-like)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003684 "damaged DNA
binding" evidence=IEA;ISO] [GO:0003697 "single-stranded DNA
binding" evidence=IEA;ISO] [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;IEP;ISO] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0019902 "phosphatase binding" evidence=ISO]
[GO:0032515 "negative regulation of phosphoprotein phosphatase
activity" evidence=ISO] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA;ISO] [GO:2000118 "regulation of
sodium-dependent phosphate transport" evidence=IEA;ISO] [GO:0000719
"photoreactive repair" evidence=ISO] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISO]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISO]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 RGD:620935 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166
GO:GO:0003684 GO:GO:0007623 GO:GO:0006281 GO:GO:0006351
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470
GO:GO:0000988 CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AY033877
IPI:IPI00203659 RefSeq:NP_596896.1 UniGene:Rn.21150 HSSP:Q43125
ProteinModelPortal:Q923I8 STRING:Q923I8 PRIDE:Q923I8 GeneID:170917
KEGG:rno:170917 UCSC:RGD:620935 InParanoid:Q923I8 NextBio:621399
ArrayExpress:Q923I8 Genevestigator:Q923I8
GermOnline:ENSRNOG00000007478 Uniprot:Q923I8
Length = 594
Score = 327 (120.2 bits), Expect = 5.6e-66, Sum P(3) = 5.6e-66
Identities = 78/223 (34%), Positives = 122/223 (54%)
Query: 75 GSHPP-RYQPCKTLLNFRDLSGLPPRPKEDIDFRHVTFGTMSESLQREVSLFQTVPKPEQ 133
G PP Y+ + L++ +L P +P + +H+ +E + + VP E+
Sbjct: 161 GQKPPLTYKRFQALISRMEL---PKKPVGAVSSQHME-NCRAEIQENHDDTYG-VPSLEE 215
Query: 134 FHKYPEMDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQS 193
+P G P + W GGETEAL++L++ L E +++ + + L PT S
Sbjct: 216 LG-FPTEGLG-PAV-WQGGETEALVRLDKHL--ERKAWVANYERPRMNANSLLASPTGLS 270
Query: 194 AALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEK 253
L+FGCLS R FY+ L D + + P ++ GQL+WRE+FYT + +NP +D+ME
Sbjct: 271 PYLRFGCLSCRLFYYRLWDLYRKVKRNSTPP-LSLFGQLLWREFFYTAATNNPRFDRMEG 329
Query: 254 NPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
NPIC+ IPW + +P L W G+TG+P+IDA+M QLR+
Sbjct: 330 NPICIQIPW--DRNPEA---LAKWAEGKTGFPWIDAIMTQLRQ 367
Score = 252 (93.8 bits), Expect = 5.6e-66, Sum P(3) = 5.6e-66
Identities = 44/76 (57%), Positives = 55/76 (72%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP G YI+RY+P+L+ FP +YIYEPW AP VQ+ ANCII DYP I
Sbjct: 429 HCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESVQKAANCIIGVDYPRPI 488
Query: 362 VNHVQASLENKQYLKK 377
VNH + S N + +K+
Sbjct: 489 VNHAETSRLNIERMKQ 504
Score = 141 (54.7 bits), Expect = 5.6e-66, Sum P(3) = 5.6e-66
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F + +G NR+RFLL+ L DLD L+ +LF+V+G P +F +L +E T+L FE
Sbjct: 59 FAASSSVGINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEY 118
Query: 62 DCE 64
D E
Sbjct: 119 DSE 121
Score = 82 (33.9 bits), Expect = 3.4e-48, Sum P(3) = 3.4e-48
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 355 KDYPERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQASLENKQNVK 407
K +P R + + E+ Q + ANCII DYP IVNH + S N + +K
Sbjct: 455 KGFPSRYIYEPWNAPESVQ----KAANCIIGVDYPRPIVNHAETSRLNIERMK 503
>UNIPROTKB|Q923I8 [details] [associations]
symbol:Cry2 "Cryptochrome-2" species:10116 "Rattus
norvegicus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
RGD:620935 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166 GO:GO:0003684
GO:GO:0007623 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0000122 GO:GO:0006606 GO:GO:0003697 GO:GO:0009881
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470 GO:GO:0000988
CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AY033877 IPI:IPI00203659
RefSeq:NP_596896.1 UniGene:Rn.21150 HSSP:Q43125
ProteinModelPortal:Q923I8 STRING:Q923I8 PRIDE:Q923I8 GeneID:170917
KEGG:rno:170917 UCSC:RGD:620935 InParanoid:Q923I8 NextBio:621399
ArrayExpress:Q923I8 Genevestigator:Q923I8
GermOnline:ENSRNOG00000007478 Uniprot:Q923I8
Length = 594
Score = 327 (120.2 bits), Expect = 5.6e-66, Sum P(3) = 5.6e-66
Identities = 78/223 (34%), Positives = 122/223 (54%)
Query: 75 GSHPP-RYQPCKTLLNFRDLSGLPPRPKEDIDFRHVTFGTMSESLQREVSLFQTVPKPEQ 133
G PP Y+ + L++ +L P +P + +H+ +E + + VP E+
Sbjct: 161 GQKPPLTYKRFQALISRMEL---PKKPVGAVSSQHME-NCRAEIQENHDDTYG-VPSLEE 215
Query: 134 FHKYPEMDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQS 193
+P G P + W GGETEAL++L++ L E +++ + + L PT S
Sbjct: 216 LG-FPTEGLG-PAV-WQGGETEALVRLDKHL--ERKAWVANYERPRMNANSLLASPTGLS 270
Query: 194 AALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEK 253
L+FGCLS R FY+ L D + + P ++ GQL+WRE+FYT + +NP +D+ME
Sbjct: 271 PYLRFGCLSCRLFYYRLWDLYRKVKRNSTPP-LSLFGQLLWREFFYTAATNNPRFDRMEG 329
Query: 254 NPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
NPIC+ IPW + +P L W G+TG+P+IDA+M QLR+
Sbjct: 330 NPICIQIPW--DRNPEA---LAKWAEGKTGFPWIDAIMTQLRQ 367
Score = 252 (93.8 bits), Expect = 5.6e-66, Sum P(3) = 5.6e-66
Identities = 44/76 (57%), Positives = 55/76 (72%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP G YI+RY+P+L+ FP +YIYEPW AP VQ+ ANCII DYP I
Sbjct: 429 HCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESVQKAANCIIGVDYPRPI 488
Query: 362 VNHVQASLENKQYLKK 377
VNH + S N + +K+
Sbjct: 489 VNHAETSRLNIERMKQ 504
Score = 141 (54.7 bits), Expect = 5.6e-66, Sum P(3) = 5.6e-66
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F + +G NR+RFLL+ L DLD L+ +LF+V+G P +F +L +E T+L FE
Sbjct: 59 FAASSSVGINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEY 118
Query: 62 DCE 64
D E
Sbjct: 119 DSE 121
Score = 82 (33.9 bits), Expect = 3.4e-48, Sum P(3) = 3.4e-48
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 355 KDYPERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQASLENKQNVK 407
K +P R + + E+ Q + ANCII DYP IVNH + S N + +K
Sbjct: 455 KGFPSRYIYEPWNAPESVQ----KAANCIIGVDYPRPIVNHAETSRLNIERMK 503
>ZFIN|ZDB-GENE-010426-6 [details] [associations]
symbol:cry3 "cryptochrome 3" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0009266 "response
to temperature stimulus" evidence=IDA] [GO:0009416 "response to
light stimulus" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-6
GO:GO:0045892 GO:GO:0006281 GO:GO:0005667 GO:GO:0009416
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0009266 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470 EMBL:AB042252
IPI:IPI00508328 UniGene:Dr.130308 ProteinModelPortal:Q9I913
STRING:Q9I913 InParanoid:Q9I913 ArrayExpress:Q9I913 Uniprot:Q9I913
Length = 598
Score = 315 (115.9 bits), Expect = 2.8e-65, Sum P(3) = 2.8e-65
Identities = 71/156 (45%), Positives = 94/156 (60%)
Query: 143 GDPLIRWLGGETEALIKLNERLSQE--IESFKSGVYLSNQVSPDLTGPPTSQSAALKFGC 200
GD L W GGETEAL +LN+ L ++ + +F+ +S Q L PT S L+FGC
Sbjct: 204 GDSLHVWKGGETEALERLNKHLDRKAWVANFERP-RISGQ---SLFPSPTGLSPYLRFGC 259
Query: 201 LSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNI 260
LS R FY+ L D F + P ++ GQL+WRE+FYT +NP +D ME NPIC+ I
Sbjct: 260 LSCRVFYYNLRDLFMKLRRRSSPP-LSLFGQLLWREFFYTAGTNNPNFDHMEGNPICVQI 318
Query: 261 PWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
PW H N E L W G+TG+P+IDA+M QLR+
Sbjct: 319 PW---DH-NPEA-LAKWAEGRTGFPWIDAIMTQLRQ 349
Score = 249 (92.7 bits), Expect = 2.8e-65, Sum P(3) = 2.8e-65
Identities = 40/76 (52%), Positives = 57/76 (75%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP G YI+RY+P+L+ +P +YIYEPW AP VQ+ ANCI+ DYP+ +
Sbjct: 411 HCYCPVGFGRRTDPSGDYIRRYIPKLKDYPNRYIYEPWNAPESVQKAANCIVGVDYPKPM 470
Query: 362 VNHVQASLENKQYLKK 377
+NH ++S N + +K+
Sbjct: 471 INHAESSRLNIERMKQ 486
Score = 151 (58.2 bits), Expect = 2.8e-65, Sum P(3) = 2.8e-65
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F G+ ++G NR+RFLLE L DLD L+ +L +V+G P +F +L +E N T+L FE
Sbjct: 41 FAGSANVGVNRWRFLLESLEDLDTSLRKLNSRLSVVRGQPTDVFPRLFKEWNVTRLTFEY 100
Query: 62 DCEGVKPY 69
D E PY
Sbjct: 101 DSE---PY 105
Score = 90 (36.7 bits), Expect = 1.2e-48, Sum P(3) = 1.2e-48
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 355 KDYPERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQASLENKQNVK 407
KDYP R + + E+ Q + ANCI+ DYP+ ++NH ++S N + +K
Sbjct: 437 KDYPNRYIYEPWNAPESVQ----KAANCIVGVDYPKPMINHAESSRLNIERMK 485
>UNIPROTKB|E2RMX4 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0000988
"protein binding transcription factor activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 CTD:1407 GeneTree:ENSGT00500000044813 OMA:FDTDGLP
GO:GO:0000988 EMBL:AAEX03007373 EMBL:AAEX03007371 EMBL:AAEX03007372
RefSeq:XP_862753.1 Ensembl:ENSCAFT00000002826 GeneID:474528
KEGG:cfa:474528 Uniprot:E2RMX4
Length = 587
Score = 306 (112.8 bits), Expect = 5.8e-65, Sum P(3) = 5.8e-65
Identities = 65/156 (41%), Positives = 93/156 (59%)
Query: 143 GDPLIRWLGGETEALIKLNERLSQE--IESFKSGVYLSNQVSPDLTGPPTSQSAALKFGC 200
G P W GGETEAL +L L ++ + +F+ +N L PT S L+FGC
Sbjct: 204 GLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS----LLASPTGLSPYLRFGC 259
Query: 201 LSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNI 260
LS R FY+ L D + + + P ++ GQL+WRE+FYT + +NP +D+ME NPIC+ I
Sbjct: 260 LSCRLFYFKLTDLYKKVKKNSSPP-LSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQI 318
Query: 261 PWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
PW + +P L W G+TG+P+IDA+M QLR+
Sbjct: 319 PW--DKNPEA---LAKWAEGRTGFPWIDAIMTQLRQ 349
Score = 244 (91.0 bits), Expect = 5.8e-65, Sum P(3) = 5.8e-65
Identities = 41/76 (53%), Positives = 57/76 (75%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP+G YI+RY+P LR FP +YIY+PW AP G+Q+ A C+I +YP+ +
Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPM 470
Query: 362 VNHVQASLENKQYLKK 377
VNH +AS N + +K+
Sbjct: 471 VNHAEASRLNIERMKQ 486
Score = 162 (62.1 bits), Expect = 5.8e-65, Sum P(3) = 5.8e-65
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F G+ ++G NR+RFLL+CL DLD L+ +LF+++G P +F +L +E N TKL E
Sbjct: 41 FAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEY 100
Query: 62 DCE 64
D E
Sbjct: 101 DSE 103
Score = 66 (28.3 bits), Expect = 2.4e-46, Sum P(3) = 2.4e-46
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 380 ANCIINKDYPERIVNHVQASLENKQNVK 407
A C+I +YP+ +VNH +AS N + +K
Sbjct: 458 AKCLIGVNYPKPMVNHAEASRLNIERMK 485
Score = 39 (18.8 bits), Expect = 4.3e-52, Sum P(3) = 4.3e-52
Identities = 23/82 (28%), Positives = 36/82 (43%)
Query: 20 LADLDRQLKSHGGQLFIVQGSPISI--FQKLKRELNFTKLCFEQDCEGVKPYQSFP-TGS 76
L DLD+ ++ +GGQ P++ FQ L ++ ++ E V + P +
Sbjct: 132 LYDLDKIIELNGGQ------PPLTYKRFQTLISKMEPLEIPVETITSEVVEKCTTPLSDD 185
Query: 77 HPPRYQ-PCKTLLNFRDLSGLP 97
H +Y P L F D GLP
Sbjct: 186 HDEKYGVPSLEELGF-DTDGLP 206
>UNIPROTKB|Q16526 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9606 "Homo sapiens"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042752 "regulation
of circadian rhythm" evidence=ISS] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=IDA]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=IDA]
[GO:0009882 "blue light photoreceptor activity" evidence=NAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009785
"blue light signaling pathway" evidence=NAS] [GO:0019902
"phosphatase binding" evidence=IPI] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166
GO:GO:0007623 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0000122 GO:GO:0003690 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_24941 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 EMBL:D84657 EMBL:D83702 EMBL:BC030519
IPI:IPI00002540 RefSeq:NP_004066.1 UniGene:Hs.151573
ProteinModelPortal:Q16526 SMR:Q16526 IntAct:Q16526
MINT:MINT-1437226 STRING:Q16526 PhosphoSite:Q16526 DMDM:74735764
PaxDb:Q16526 PRIDE:Q16526 DNASU:1407 Ensembl:ENST00000008527
GeneID:1407 KEGG:hsa:1407 UCSC:uc001tmi.3 GeneCards:GC12M107385
HGNC:HGNC:2384 HPA:CAB018762 MIM:601933 neXtProt:NX_Q16526
PharmGKB:PA26904 InParanoid:Q16526 OMA:FDTDGLP OrthoDB:EOG4DBTDC
PhylomeDB:Q16526 ChiTaRS:CRY1 GenomeRNAi:1407 NextBio:5753
ArrayExpress:Q16526 Bgee:Q16526 CleanEx:HS_CRY1
Genevestigator:Q16526 GermOnline:ENSG00000008405 GO:GO:0000988
Uniprot:Q16526
Length = 586
Score = 303 (111.7 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 63/150 (42%), Positives = 91/150 (60%)
Query: 149 WLGGETEALIKLNERLSQE--IESFKSGVYLSNQVSPDLTGPPTSQSAALKFGCLSVRRF 206
W GGETEAL +L L ++ + +F+ +N L PT S L+FGCLS R F
Sbjct: 210 WPGGETEALTRLERHLERKAWVANFERPRMNANS----LLASPTGLSPYLRFGCLSCRLF 265
Query: 207 YWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNIPWLPES 266
Y+ L D + + + P ++ GQL+WRE+FYT + +NP +D+ME NPIC+ IPW +
Sbjct: 266 YFKLTDLYKKVKKNSSPP-LSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPW--DK 322
Query: 267 HPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
+P L W G+TG+P+IDA+M QLR+
Sbjct: 323 NPEA---LAKWAEGRTGFPWIDAIMTQLRQ 349
Score = 244 (91.0 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 41/76 (53%), Positives = 57/76 (75%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP+G YI+RY+P LR FP +YIY+PW AP G+Q+ A C+I +YP+ +
Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPM 470
Query: 362 VNHVQASLENKQYLKK 377
VNH +AS N + +K+
Sbjct: 471 VNHAEASRLNIERMKQ 486
Score = 162 (62.1 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F G+ ++G NR+RFLL+CL DLD L+ +LF+++G P +F +L +E N TKL E
Sbjct: 41 FAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEY 100
Query: 62 DCE 64
D E
Sbjct: 101 DSE 103
Score = 66 (28.3 bits), Expect = 5.1e-46, Sum P(3) = 5.1e-46
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 380 ANCIINKDYPERIVNHVQASLENKQNVK 407
A C+I +YP+ +VNH +AS N + +K
Sbjct: 458 AKCLIGVNYPKPMVNHAEASRLNIERMK 485
>RGD|735083 [details] [associations]
symbol:Cry1 "cryptochrome 1 (photolyase-like)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003690 "double-stranded DNA binding" evidence=IEA;ISO]
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA;ISO] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA;ISO] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0042752 "regulation of circadian rhythm"
evidence=ISO;ISS] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=ISO] [GO:0003914 "DNA (6-4) photolyase activity"
evidence=ISO] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 RGD:735083 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0000166 GO:GO:0006281
GO:GO:0006351 GO:GO:0042752 GO:GO:0048511 GO:GO:0009881
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407 HOVERGEN:HBG053470
GeneTree:ENSGT00500000044813 EMBL:AF545855 EMBL:BC107677
IPI:IPI00395230 RefSeq:NP_942045.2 UniGene:Rn.43646
ProteinModelPortal:Q32Q86 STRING:Q32Q86 PhosphoSite:Q32Q86
PRIDE:Q32Q86 Ensembl:ENSRNOT00000009124 GeneID:299691
KEGG:rno:299691 UCSC:RGD:735083 NextBio:645641 ArrayExpress:Q32Q86
Genevestigator:Q32Q86 GermOnline:ENSRNOG00000006622 Uniprot:Q32Q86
Length = 588
Score = 303 (111.7 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 63/150 (42%), Positives = 91/150 (60%)
Query: 149 WLGGETEALIKLNERLSQE--IESFKSGVYLSNQVSPDLTGPPTSQSAALKFGCLSVRRF 206
W GGETEAL +L L ++ + +F+ +N L PT S L+FGCLS R F
Sbjct: 210 WPGGETEALTRLERHLERKAWVANFERPRMNANS----LLASPTGLSPYLRFGCLSCRLF 265
Query: 207 YWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNIPWLPES 266
Y+ L D + + + P ++ GQL+WRE+FYT + +NP +D+ME NPIC+ IPW +
Sbjct: 266 YFKLTDLYKKVKKNSSPP-LSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPW--DK 322
Query: 267 HPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
+P L W G+TG+P+IDA+M QLR+
Sbjct: 323 NPEA---LAKWAEGRTGFPWIDAIMTQLRQ 349
Score = 244 (91.0 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 41/76 (53%), Positives = 57/76 (75%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP+G YI+RY+P LR FP +YIY+PW AP G+Q+ A C+I +YP+ +
Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPM 470
Query: 362 VNHVQASLENKQYLKK 377
VNH +AS N + +K+
Sbjct: 471 VNHAEASRLNIERMKQ 486
Score = 162 (62.1 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F G+ ++G NR+RFLL+CL DLD L+ +LF+++G P +F +L +E N TKL E
Sbjct: 41 FAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEY 100
Query: 62 DCE 64
D E
Sbjct: 101 DSE 103
Score = 66 (28.3 bits), Expect = 5.3e-46, Sum P(3) = 5.3e-46
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 380 ANCIINKDYPERIVNHVQASLENKQNVK 407
A C+I +YP+ +VNH +AS N + +K
Sbjct: 458 AKCLIGVNYPKPMVNHAEASRLNIERMK 485
>UNIPROTKB|Q32Q86 [details] [associations]
symbol:Cry1 "Cryptochrome-1" species:10116 "Rattus
norvegicus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
RGD:735083 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0048511
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AF545855
EMBL:BC107677 IPI:IPI00395230 RefSeq:NP_942045.2 UniGene:Rn.43646
ProteinModelPortal:Q32Q86 STRING:Q32Q86 PhosphoSite:Q32Q86
PRIDE:Q32Q86 Ensembl:ENSRNOT00000009124 GeneID:299691
KEGG:rno:299691 UCSC:RGD:735083 NextBio:645641 ArrayExpress:Q32Q86
Genevestigator:Q32Q86 GermOnline:ENSRNOG00000006622 Uniprot:Q32Q86
Length = 588
Score = 303 (111.7 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 63/150 (42%), Positives = 91/150 (60%)
Query: 149 WLGGETEALIKLNERLSQE--IESFKSGVYLSNQVSPDLTGPPTSQSAALKFGCLSVRRF 206
W GGETEAL +L L ++ + +F+ +N L PT S L+FGCLS R F
Sbjct: 210 WPGGETEALTRLERHLERKAWVANFERPRMNANS----LLASPTGLSPYLRFGCLSCRLF 265
Query: 207 YWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNIPWLPES 266
Y+ L D + + + P ++ GQL+WRE+FYT + +NP +D+ME NPIC+ IPW +
Sbjct: 266 YFKLTDLYKKVKKNSSPP-LSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPW--DK 322
Query: 267 HPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
+P L W G+TG+P+IDA+M QLR+
Sbjct: 323 NPEA---LAKWAEGRTGFPWIDAIMTQLRQ 349
Score = 244 (91.0 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 41/76 (53%), Positives = 57/76 (75%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP+G YI+RY+P LR FP +YIY+PW AP G+Q+ A C+I +YP+ +
Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPM 470
Query: 362 VNHVQASLENKQYLKK 377
VNH +AS N + +K+
Sbjct: 471 VNHAEASRLNIERMKQ 486
Score = 162 (62.1 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F G+ ++G NR+RFLL+CL DLD L+ +LF+++G P +F +L +E N TKL E
Sbjct: 41 FAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEY 100
Query: 62 DCE 64
D E
Sbjct: 101 DSE 103
Score = 66 (28.3 bits), Expect = 5.3e-46, Sum P(3) = 5.3e-46
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 380 ANCIINKDYPERIVNHVQASLENKQNVK 407
A C+I +YP+ +VNH +AS N + +K
Sbjct: 458 AKCLIGVNYPKPMVNHAEASRLNIERMK 485
>MGI|MGI:1270841 [details] [associations]
symbol:Cry1 "cryptochrome 1 (photolyase-like)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=ISO;IDA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IDA;IMP] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0019902 "phosphatase binding" evidence=ISO] [GO:0042752
"regulation of circadian rhythm" evidence=IMP] [GO:0048511
"rhythmic process" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 MGI:MGI:1270841 GO:GO:0005829
GO:GO:0005739 GO:GO:0005654 GO:GO:0000166 GO:GO:0007623
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0000122
GO:GO:0003690 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_109335 Reactome:REACT_24972
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 OMA:FDTDGLP
OrthoDB:EOG4DBTDC GO:GO:0000988 EMBL:AB000777 EMBL:AF156986
EMBL:AK162460 EMBL:BC022174 EMBL:BC085499 IPI:IPI00129123
RefSeq:NP_031797.1 UniGene:Mm.26237 ProteinModelPortal:P97784
SMR:P97784 DIP:DIP-38515N IntAct:P97784 STRING:P97784
PhosphoSite:P97784 PRIDE:P97784 Ensembl:ENSMUST00000020227
GeneID:12952 KEGG:mmu:12952 UCSC:uc007gle.1 InParanoid:P97784
NextBio:282662 Bgee:P97784 CleanEx:MM_CRY1 Genevestigator:P97784
GermOnline:ENSMUSG00000020038 Uniprot:P97784
Length = 606
Score = 303 (111.7 bits), Expect = 1.7e-64, Sum P(3) = 1.7e-64
Identities = 63/150 (42%), Positives = 91/150 (60%)
Query: 149 WLGGETEALIKLNERLSQE--IESFKSGVYLSNQVSPDLTGPPTSQSAALKFGCLSVRRF 206
W GGETEAL +L L ++ + +F+ +N L PT S L+FGCLS R F
Sbjct: 210 WPGGETEALTRLERHLERKAWVANFERPRMNANS----LLASPTGLSPYLRFGCLSCRLF 265
Query: 207 YWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNIPWLPES 266
Y+ L D + + + P ++ GQL+WRE+FYT + +NP +D+ME NPIC+ IPW +
Sbjct: 266 YFKLTDLYKKVKKNSSPP-LSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPW--DK 322
Query: 267 HPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
+P L W G+TG+P+IDA+M QLR+
Sbjct: 323 NPEA---LAKWAEGRTGFPWIDAIMTQLRQ 349
Score = 244 (91.0 bits), Expect = 1.7e-64, Sum P(3) = 1.7e-64
Identities = 41/76 (53%), Positives = 57/76 (75%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP+G YI+RY+P LR FP +YIY+PW AP G+Q+ A C+I +YP+ +
Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPM 470
Query: 362 VNHVQASLENKQYLKK 377
VNH +AS N + +K+
Sbjct: 471 VNHAEASRLNIERMKQ 486
Score = 162 (62.1 bits), Expect = 1.7e-64, Sum P(3) = 1.7e-64
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F G+ ++G NR+RFLL+CL DLD L+ +LF+++G P +F +L +E N TKL E
Sbjct: 41 FAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEY 100
Query: 62 DCE 64
D E
Sbjct: 101 DSE 103
Score = 66 (28.3 bits), Expect = 7.0e-46, Sum P(3) = 7.0e-46
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 380 ANCIINKDYPERIVNHVQASLENKQNVK 407
A C+I +YP+ +VNH +AS N + +K
Sbjct: 458 AKCLIGVNYPKPMVNHAEASRLNIERMK 485
>UNIPROTKB|Q8WP19 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9541 "Macaca
fascicularis" [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0042752 GO:GO:0048511 GO:GO:0009881 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470 EMBL:AB074458
ProteinModelPortal:Q8WP19 Uniprot:Q8WP19
Length = 586
Score = 302 (111.4 bits), Expect = 2.1e-64, Sum P(3) = 2.1e-64
Identities = 63/150 (42%), Positives = 90/150 (60%)
Query: 149 WLGGETEALIKLNERLSQE--IESFKSGVYLSNQVSPDLTGPPTSQSAALKFGCLSVRRF 206
W GGETEAL +L L ++ + +F+ +N L PT S L+FGCLS R F
Sbjct: 210 WPGGETEALTRLERHLERKAWVANFERPRMNANS----LLASPTGLSPYLRFGCLSCRLF 265
Query: 207 YWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNIPWLPES 266
Y+ L D + + P ++ GQL+WRE+FYT + +NP +D+ME NPIC+ IPW +
Sbjct: 266 YFKLTDLYKKVKRNSSPP-LSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPW--DK 322
Query: 267 HPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
+P L W G+TG+P+IDA+M QLR+
Sbjct: 323 NPEA---LAKWAEGRTGFPWIDAIMTQLRQ 349
Score = 243 (90.6 bits), Expect = 2.1e-64, Sum P(3) = 2.1e-64
Identities = 41/76 (53%), Positives = 57/76 (75%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP+G YI+RY+P LR FP +YIY+PW AP G+Q+ A C+I +YP+ +
Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGINYPKPM 470
Query: 362 VNHVQASLENKQYLKK 377
VNH +AS N + +K+
Sbjct: 471 VNHAEASRLNIERMKQ 486
Score = 162 (62.1 bits), Expect = 2.1e-64, Sum P(3) = 2.1e-64
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F G+ ++G NR+RFLL+CL DLD L+ +LF+++G P +F +L +E N TKL E
Sbjct: 41 FAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEY 100
Query: 62 DCE 64
D E
Sbjct: 101 DSE 103
Score = 65 (27.9 bits), Expect = 8.4e-46, Sum P(3) = 8.4e-46
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 380 ANCIINKDYPERIVNHVQASLENKQNVK 407
A C+I +YP+ +VNH +AS N + +K
Sbjct: 458 AKCLIGINYPKPMVNHAEASRLNIERMK 485
>MGI|MGI:1270859 [details] [associations]
symbol:Cry2 "cryptochrome 2 (photolyase-like)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003684 "damaged DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO] [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IPI] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0016829
"lyase activity" evidence=IEA] [GO:0018298 "protein-chromophore
linkage" evidence=IEA] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0032515 "negative regulation of phosphoprotein
phosphatase activity" evidence=ISO] [GO:0042752 "regulation of
circadian rhythm" evidence=IMP] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 MGI:MGI:1270859 GO:GO:0005829 GO:GO:0005739
GO:GO:0005654 GO:GO:0000166 GO:GO:0003684 GO:GO:0007623
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0000122
GO:GO:0006606 GO:GO:0003697 GO:GO:0009881 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 Reactome:REACT_109335
Reactome:REACT_24972 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 GO:GO:0000988
CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AF156987 EMBL:AK041696
EMBL:AK133781 EMBL:BC054794 EMBL:BC066799 EMBL:AK172994
EMBL:AB003433 IPI:IPI00128234 RefSeq:NP_001106804.1
RefSeq:NP_034093.1 UniGene:Mm.254181 ProteinModelPortal:Q9R194
SMR:Q9R194 DIP:DIP-38517N IntAct:Q9R194 STRING:Q9R194
PhosphoSite:Q9R194 PRIDE:Q9R194 Ensembl:ENSMUST00000090559
Ensembl:ENSMUST00000111278 GeneID:12953 KEGG:mmu:12953
InParanoid:Q9R194 OMA:LCKHLLI NextBio:282666 Bgee:Q9R194
CleanEx:MM_CRY2 Genevestigator:Q9R194 GermOnline:ENSMUSG00000068742
Uniprot:Q9R194
Length = 592
Score = 317 (116.6 bits), Expect = 3.4e-64, Sum P(3) = 3.4e-64
Identities = 77/223 (34%), Positives = 119/223 (53%)
Query: 75 GSHPP-RYQPCKTLLNFRDLSGLPPRPKEDIDFRHVTFGTMSESLQREVSLFQTVPKPEQ 133
G PP Y+ + L++ +L P +P + + + + +Q VP E+
Sbjct: 161 GQKPPLTYKRFQALISRMEL---PKKPAVAVSSQQME--SCRAEIQENHDDTYGVPSLEE 215
Query: 134 FHKYPEMDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQS 193
+P G P + W GGETEAL +L++ L E +++ + + L PT S
Sbjct: 216 LG-FPTEGLG-PAV-WQGGETEALARLDKHL--ERKAWVANYERPRMNANSLLASPTGLS 270
Query: 194 AALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEK 253
L+FGCLS R FY+ L D + + P ++ GQL+WRE+FYT + +NP +D+ME
Sbjct: 271 PYLRFGCLSCRLFYYRLWDLYKKVKRNSTPP-LSLFGQLLWREFFYTAATNNPRFDRMEG 329
Query: 254 NPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
NPIC+ IPW + +P L W G+TG+P+IDA+M QLR+
Sbjct: 330 NPICIQIPW--DRNPEA---LAKWAEGKTGFPWIDAIMTQLRQ 367
Score = 246 (91.7 bits), Expect = 3.4e-64, Sum P(3) = 3.4e-64
Identities = 43/76 (56%), Positives = 54/76 (71%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP G YI+RY+P+L+ FP +YIYEPW AP VQ+ A CII DYP I
Sbjct: 429 HCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESVQKAAKCIIGVDYPRPI 488
Query: 362 VNHVQASLENKQYLKK 377
VNH + S N + +K+
Sbjct: 489 VNHAETSRLNIERMKQ 504
Score = 141 (54.7 bits), Expect = 3.4e-64, Sum P(3) = 3.4e-64
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F + +G NR+RFLL+ L DLD L+ +LF+V+G P +F +L +E T+L FE
Sbjct: 59 FAASSSVGINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEY 118
Query: 62 DCE 64
D E
Sbjct: 119 DSE 121
Score = 76 (31.8 bits), Expect = 2.0e-46, Sum P(3) = 2.0e-46
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 355 KDYPERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQASLENKQNVK 407
K +P R + + E+ Q + A CII DYP IVNH + S N + +K
Sbjct: 455 KGFPSRYIYEPWNAPESVQ----KAAKCIIGVDYPRPIVNHAETSRLNIERMK 503
>UNIPROTKB|F1NX44 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739 GO:GO:0005634
GO:GO:0003684 GO:GO:0007623 GO:GO:0006281 GO:GO:0042752
GO:GO:0000122 GO:GO:0006606 GO:GO:0003697 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 GO:GO:0000988 IPI:IPI00572393
OMA:DIQENHD EMBL:AADN02033514 EMBL:AADN02033515 EMBL:AADN02033516
Ensembl:ENSGALT00000038345 ArrayExpress:F1NX44 Uniprot:F1NX44
Length = 537
Score = 312 (114.9 bits), Expect = 4.0e-64, Sum P(3) = 4.0e-64
Identities = 77/223 (34%), Positives = 120/223 (53%)
Query: 75 GSHPP-RYQPCKTLLNFRDLSGLPPRPKEDIDFRHVTFGTMSESLQREVSLFQTVPKPEQ 133
G+ PP Y+ + +++ +L P +P I + + T +Q VP E+
Sbjct: 107 GNKPPLTYKRFQAIISRMEL---PKKPVSSIVSQQME--TCKVDIQENHDDVYGVPSLEE 161
Query: 134 FHKYPEMDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQS 193
+P D P + W GGETEAL +L++ L E +++ + + L PT S
Sbjct: 162 LG-FPT-DGLAPAV-WQGGETEALARLDKHL--ERKAWVANYERPRMNANSLLASPTGLS 216
Query: 194 AALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEK 253
L+FGCLS R FY+ L + + + P ++ GQL+WRE+FYT + +NP +D+ME
Sbjct: 217 PYLRFGCLSCRLFYYHLWELYKKVKRNSTPP-LSLYGQLLWREFFYTAATNNPKFDRMEG 275
Query: 254 NPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
NPIC+ IPW + +P L W G+TG+P+IDA+M QLR+
Sbjct: 276 NPICIQIPW--DKNPEA---LAKWAEGKTGFPWIDAIMTQLRQ 313
Score = 246 (91.7 bits), Expect = 4.0e-64, Sum P(3) = 4.0e-64
Identities = 42/76 (55%), Positives = 55/76 (72%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP G Y+KRY+P+L+ FP +YIYEPW AP VQ+ A CII DYP+ +
Sbjct: 375 HCYCPVGFGRRTDPSGDYVKRYLPKLKGFPSRYIYEPWNAPESVQKAAKCIIGVDYPKPM 434
Query: 362 VNHVQASLENKQYLKK 377
VNH + S N + +K+
Sbjct: 435 VNHAETSRLNIERMKQ 450
Score = 141 (54.7 bits), Expect = 4.0e-64, Sum P(3) = 4.0e-64
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F + +G NR+RFLL+ L DLD L+ +LF+V+G P +F +L +E T+L FE
Sbjct: 5 FAASSAVGINRWRFLLQSLEDLDNSLRKLNSRLFVVRGQPTDVFPRLFKEWGVTRLTFEY 64
Query: 62 DCE 64
D E
Sbjct: 65 DSE 67
Score = 74 (31.1 bits), Expect = 3.8e-46, Sum P(3) = 3.8e-46
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 355 KDYPERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQASLENKQNVK 407
K +P R + + E+ Q + A CII DYP+ +VNH + S N + +K
Sbjct: 401 KGFPSRYIYEPWNAPESVQ----KAAKCIIGVDYPKPMVNHAETSRLNIERMK 449
>UNIPROTKB|F1SPQ5 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:CU463085 EMBL:CU462969 Ensembl:ENSSSCT00000000173
Uniprot:F1SPQ5
Length = 589
Score = 306 (112.8 bits), Expect = 5.3e-64, Sum P(3) = 5.3e-64
Identities = 65/156 (41%), Positives = 93/156 (59%)
Query: 143 GDPLIRWLGGETEALIKLNERLSQE--IESFKSGVYLSNQVSPDLTGPPTSQSAALKFGC 200
G P W GGETEAL +L L ++ + +F+ +N L PT S L+FGC
Sbjct: 204 GLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS----LLASPTGLSPYLRFGC 259
Query: 201 LSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNI 260
LS R FY+ L D + + + P ++ GQL+WRE+FYT + +NP +D+ME NPIC+ I
Sbjct: 260 LSCRLFYFKLTDLYKKVKKNSSPP-LSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQI 318
Query: 261 PWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
PW + +P L W G+TG+P+IDA+M QLR+
Sbjct: 319 PW--DKNPEA---LAKWAEGRTGFPWIDAIMTQLRQ 349
Score = 235 (87.8 bits), Expect = 5.3e-64, Sum P(3) = 5.3e-64
Identities = 41/77 (53%), Positives = 57/77 (74%)
Query: 302 YCVCPVNFGRRLDPDGIYIKR-YVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPER 360
+C CPV FGRR DP+G YI+R Y+P LR FP +YIY+PW AP G+Q+ A C+I +YP+
Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKP 470
Query: 361 IVNHVQASLENKQYLKK 377
+VNH +AS N + +K+
Sbjct: 471 MVNHAEASRLNIERMKQ 487
Score = 162 (62.1 bits), Expect = 5.3e-64, Sum P(3) = 5.3e-64
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F G+ ++G NR+RFLL+CL DLD L+ +LF+++G P +F +L +E N TKL E
Sbjct: 41 FAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEY 100
Query: 62 DCE 64
D E
Sbjct: 101 DSE 103
Score = 66 (28.3 bits), Expect = 2.4e-46, Sum P(3) = 2.4e-46
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 380 ANCIINKDYPERIVNHVQASLENKQNVK 407
A C+I +YP+ +VNH +AS N + +K
Sbjct: 459 AKCLIGVNYPKPMVNHAEASRLNIERMK 486
Score = 38 (18.4 bits), Expect = 4.9e-51, Sum P(3) = 4.9e-51
Identities = 23/82 (28%), Positives = 36/82 (43%)
Query: 20 LADLDRQLKSHGGQLFIVQGSPISI--FQKLKRELNFTKLCFEQDCEGVKPYQSFP-TGS 76
L DLD+ ++ +GGQ P++ FQ L ++ ++ E V + P +
Sbjct: 132 LYDLDKIIELNGGQ------PPLTYKRFQTLISKMEPLEIPVETITSEVIEKCTTPLSDD 185
Query: 77 HPPRYQ-PCKTLLNFRDLSGLP 97
H +Y P L F D GLP
Sbjct: 186 HDEKYGVPSLEELGF-DTDGLP 206
>UNIPROTKB|Q49AN0 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=IDA] [GO:0003914 "DNA (6-4) photolyase activity"
evidence=IDA] [GO:0000719 "photoreactive repair" evidence=IDA]
[GO:0003684 "damaged DNA binding" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0009785 "blue light signaling pathway"
evidence=NAS] [GO:0009882 "blue light photoreceptor activity"
evidence=NAS] [GO:0019902 "phosphatase binding" evidence=IPI]
[GO:0032515 "negative regulation of phosphoprotein phosphatase
activity" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=ISS] [GO:0005576 "extracellular region" evidence=IDA]
[GO:2000118 "regulation of sodium-dependent phosphate transport"
evidence=IDA] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 GO:GO:0005576
GO:GO:0000166 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0006351 GO:GO:0042752 GO:GO:0000122 GO:GO:0006606
GO:GO:0003697 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
Reactome:REACT_24941 EMBL:AC068385 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470
GO:GO:0000988 CTD:1408 EMBL:AK294904 EMBL:BC035161 EMBL:BC041814
EMBL:AB014558 IPI:IPI00216898 IPI:IPI00895886 RefSeq:NP_001120929.1
RefSeq:NP_066940.2 UniGene:Hs.532491 ProteinModelPortal:Q49AN0
SMR:Q49AN0 IntAct:Q49AN0 STRING:Q49AN0 DMDM:118572252 PaxDb:Q49AN0
PRIDE:Q49AN0 DNASU:1408 Ensembl:ENST00000417225 GeneID:1408
KEGG:hsa:1408 UCSC:uc009ykw.3 UCSC:uc010rgo.2 GeneCards:GC11P045868
H-InvDB:HIX0201587 HGNC:HGNC:2385 HPA:HPA037577 MIM:603732
neXtProt:NX_Q49AN0 PharmGKB:PA26905 InParanoid:Q49AN0
OrthoDB:EOG4VT5WZ PhylomeDB:Q49AN0 GenomeRNAi:1408 NextBio:5757
ArrayExpress:Q49AN0 Bgee:Q49AN0 CleanEx:HS_CRY2
Genevestigator:Q49AN0 GermOnline:ENSG00000121671 GO:GO:0032515
GO:GO:2000118 Uniprot:Q49AN0
Length = 593
Score = 315 (115.9 bits), Expect = 5.8e-64, Sum P(3) = 5.8e-64
Identities = 80/219 (36%), Positives = 120/219 (54%)
Query: 82 QPCKTLLNFRDLSGLPPRPKEDIDFRHVTFGTMSESLQREV--SLFQT--VPKPEQFHKY 137
+P T F+ + PK+ + VT M ES + E+ + +T VP E+ +
Sbjct: 164 KPPLTYKRFQAIISRMELPKKPVGL--VTSQQM-ESCRAEIQENHDETYGVPSLEELG-F 219
Query: 138 PEMDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQSAALK 197
P G P + W GGETEAL +L++ L E +++ + + L PT S L+
Sbjct: 220 PTEGLG-PAV-WQGGETEALARLDKHL--ERKAWVANYERPRMNANSLLASPTGLSPYLR 275
Query: 198 FGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPIC 257
FGCLS R FY+ L D + + P ++ GQL+WRE+FYT + +NP +D+ME NPIC
Sbjct: 276 FGCLSCRLFYYRLWDLYKKVKRNSTPP-LSLFGQLLWREFFYTAATNNPRFDRMEGNPIC 334
Query: 258 LNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
+ IPW + +P L W G+TG+P+IDA+M QLR+
Sbjct: 335 IQIPW--DRNPEA---LAKWAEGKTGFPWIDAIMTQLRQ 368
Score = 246 (91.7 bits), Expect = 5.8e-64, Sum P(3) = 5.8e-64
Identities = 42/76 (55%), Positives = 54/76 (71%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP G YI+RY+P+L+ FP +YIYEPW AP +Q+ A CII DYP I
Sbjct: 430 HCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWNAPESIQKAAKCIIGVDYPRPI 489
Query: 362 VNHVQASLENKQYLKK 377
VNH + S N + +K+
Sbjct: 490 VNHAETSRLNIERMKQ 505
Score = 141 (54.7 bits), Expect = 5.8e-64, Sum P(3) = 5.8e-64
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F + +G NR+RFLL+ L DLD L+ +LF+V+G P +F +L +E T+L FE
Sbjct: 60 FAASSSVGINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEY 119
Query: 62 DCE 64
D E
Sbjct: 120 DSE 122
Score = 74 (31.1 bits), Expect = 5.5e-46, Sum P(3) = 5.5e-46
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 355 KDYPERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQASLENKQNVK 407
K +P R + + E+ Q + A CII DYP IVNH + S N + +K
Sbjct: 456 KAFPSRYIYEPWNAPESIQ----KAAKCIIGVDYPRPIVNHAETSRLNIERMK 504
>UNIPROTKB|Q8QG60 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AY034433
EMBL:AY046568 EMBL:AF251344 IPI:IPI00572393 RefSeq:NP_989575.1
UniGene:Gga.20033 HSSP:P05327 ProteinModelPortal:Q8QG60
STRING:Q8QG60 Ensembl:ENSGALT00000038344 GeneID:374092
KEGG:gga:374092 CTD:1408 InParanoid:Q8QG60 NextBio:20813611
Uniprot:Q8QG60
Length = 582
Score = 313 (115.2 bits), Expect = 6.3e-64, Sum P(3) = 6.3e-64
Identities = 77/223 (34%), Positives = 120/223 (53%)
Query: 75 GSHPP-RYQPCKTLLNFRDLSGLPPRPKEDIDFRHVTFGTMSESLQREVSLFQTVPKPEQ 133
G+ PP Y+ + +++ +L P +P I + + T +Q VP E+
Sbjct: 152 GNKPPLTYKRFQAIISRMEL---PKKPVSSIVSQQME--TCKVDIQENHDDVYGVPSLEE 206
Query: 134 FHKYPEMDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQS 193
+P D P + W GGETEAL +L++ L E +++ + + L PT S
Sbjct: 207 LG-FPT-DGLAPAV-WQGGETEALARLDKHL--ERKAWVANYERPRMNANSLLASPTGLS 261
Query: 194 AALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEK 253
L+FGCLS R FY+ L + + + P ++ GQL+WRE+FYT + +NP +D+ME
Sbjct: 262 PYLRFGCLSCRLFYYRLWELYKKVKRNSTPP-LSLYGQLLWREFFYTAATNNPKFDRMEG 320
Query: 254 NPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
NPIC+ IPW + +P L W G+TG+P+IDA+M QLR+
Sbjct: 321 NPICIQIPW--DKNPEA---LAKWAEGKTGFPWIDAIMTQLRQ 358
Score = 246 (91.7 bits), Expect = 6.3e-64, Sum P(3) = 6.3e-64
Identities = 42/76 (55%), Positives = 55/76 (72%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP G Y+KRY+P+L+ FP +YIYEPW AP VQ+ A CII DYP+ +
Sbjct: 420 HCYCPVGFGRRTDPSGDYVKRYLPKLKGFPSRYIYEPWNAPESVQKAAKCIIGVDYPKPM 479
Query: 362 VNHVQASLENKQYLKK 377
VNH + S N + +K+
Sbjct: 480 VNHAETSRLNIERMKQ 495
Score = 142 (55.0 bits), Expect = 6.3e-64, Sum P(3) = 6.3e-64
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F + +G NR+RFLL+ L DLD L+ +LF+V+G P +F +L +E T+L FE
Sbjct: 50 FAASSAVGINRWRFLLQSLEDLDNSLRKLNSRLFVVRGQPTDVFPRLFKEWGVTRLAFEY 109
Query: 62 DCE 64
D E
Sbjct: 110 DSE 112
Score = 74 (31.1 bits), Expect = 6.0e-46, Sum P(3) = 6.0e-46
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 355 KDYPERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQASLENKQNVK 407
K +P R + + E+ Q + A CII DYP+ +VNH + S N + +K
Sbjct: 446 KGFPSRYIYEPWNAPESVQ----KAAKCIIGVDYPKPMVNHAETSRLNIERMK 494
>UNIPROTKB|F1P3P5 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006606
"protein import into nucleus" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
EMBL:AADN02033514 EMBL:AADN02033515 EMBL:AADN02033516
IPI:IPI00821771 Ensembl:ENSGALT00000013745 ArrayExpress:F1P3P5
Uniprot:F1P3P5
Length = 531
Score = 312 (114.9 bits), Expect = 6.9e-64, Sum P(3) = 6.9e-64
Identities = 77/223 (34%), Positives = 120/223 (53%)
Query: 75 GSHPP-RYQPCKTLLNFRDLSGLPPRPKEDIDFRHVTFGTMSESLQREVSLFQTVPKPEQ 133
G+ PP Y+ + +++ +L P +P I + + T +Q VP E+
Sbjct: 101 GNKPPLTYKRFQAIISRMEL---PKKPVSSIVSQQME--TCKVDIQENHDDVYGVPSLEE 155
Query: 134 FHKYPEMDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQS 193
+P D P + W GGETEAL +L++ L E +++ + + L PT S
Sbjct: 156 LG-FPT-DGLAPAV-WQGGETEALARLDKHL--ERKAWVANYERPRMNANSLLASPTGLS 210
Query: 194 AALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEK 253
L+FGCLS R FY+ L + + + P ++ GQL+WRE+FYT + +NP +D+ME
Sbjct: 211 PYLRFGCLSCRLFYYHLWELYKKVKRNSTPP-LSLYGQLLWREFFYTAATNNPKFDRMEG 269
Query: 254 NPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
NPIC+ IPW + +P L W G+TG+P+IDA+M QLR+
Sbjct: 270 NPICIQIPW--DKNPEA---LAKWAEGKTGFPWIDAIMTQLRQ 307
Score = 246 (91.7 bits), Expect = 6.9e-64, Sum P(3) = 6.9e-64
Identities = 42/76 (55%), Positives = 55/76 (72%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP G Y+KRY+P+L+ FP +YIYEPW AP VQ+ A CII DYP+ +
Sbjct: 369 HCYCPVGFGRRTDPSGDYVKRYLPKLKGFPSRYIYEPWNAPESVQKAAKCIIGVDYPKPM 428
Query: 362 VNHVQASLENKQYLKK 377
VNH + S N + +K+
Sbjct: 429 VNHAETSRLNIERMKQ 444
Score = 138 (53.6 bits), Expect = 6.9e-64, Sum P(3) = 6.9e-64
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 8 IGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQDCE 64
+G NR+RFLL+ L DLD L+ +LF+V+G P +F +L +E T+L FE D E
Sbjct: 5 VGINRWRFLLQSLEDLDNSLRKLNSRLFVVRGQPTDVFPRLFKEWGVTRLTFEYDSE 61
Score = 74 (31.1 bits), Expect = 6.6e-46, Sum P(3) = 6.6e-46
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 355 KDYPERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQASLENKQNVK 407
K +P R + + E+ Q + A CII DYP+ +VNH + S N + +K
Sbjct: 395 KGFPSRYIYEPWNAPESVQ----KAAKCIIGVDYPKPMVNHAETSRLNIERMK 443
>UNIPROTKB|Q70AD6 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:134510 "Nannospalax
judaei" [GO:0042752 "regulation of circadian rhythm" evidence=ISS]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000166 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 HOVERGEN:HBG053470 EMBL:AJ606298
ProteinModelPortal:Q70AD6 Uniprot:Q70AD6
Length = 587
Score = 302 (111.4 bits), Expect = 7.1e-64, Sum P(3) = 7.1e-64
Identities = 63/150 (42%), Positives = 90/150 (60%)
Query: 149 WLGGETEALIKLNERLSQE--IESFKSGVYLSNQVSPDLTGPPTSQSAALKFGCLSVRRF 206
W GGETEAL +L L + + +F+ +N L PT S L+FGCLS R F
Sbjct: 210 WPGGETEALTRLERHLERRAWVANFERPRMNANS----LLASPTGLSPYLRFGCLSCRLF 265
Query: 207 YWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNIPWLPES 266
Y+ L D + + + P ++ GQL+WRE+FYT + +NP +D+ME NPIC+ IPW +
Sbjct: 266 YFKLTDLYKKVKKNSSPP-LSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPW--DK 322
Query: 267 HPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
+P L W G+TG+P+IDA+M QLR+
Sbjct: 323 NPEA---LAKWAEGRTGFPWIDAIMTQLRQ 349
Score = 244 (91.0 bits), Expect = 7.1e-64, Sum P(3) = 7.1e-64
Identities = 41/76 (53%), Positives = 57/76 (75%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP+G YI+RY+P LR FP +YIY+PW AP G+Q+ A C+I +YP+ +
Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPM 470
Query: 362 VNHVQASLENKQYLKK 377
VNH +AS N + +K+
Sbjct: 471 VNHAEASRLNIERMKQ 486
Score = 156 (60.0 bits), Expect = 7.1e-64, Sum P(3) = 7.1e-64
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F G+ ++G NR+RFLL+CL DLD L+ +L +++G P +F +L +E N TKL E
Sbjct: 41 FAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLLVIRGQPADVFPRLFKEWNITKLSIEY 100
Query: 62 DCE 64
D E
Sbjct: 101 DSE 103
Score = 66 (28.3 bits), Expect = 2.8e-45, Sum P(3) = 2.8e-45
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 380 ANCIINKDYPERIVNHVQASLENKQNVK 407
A C+I +YP+ +VNH +AS N + +K
Sbjct: 458 AKCLIGVNYPKPMVNHAEASRLNIERMK 485
>UNIPROTKB|F1SHJ9 [details] [associations]
symbol:CRY2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913
"DNA photolyase activity" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
OMA:LCKHLLI EMBL:FP101987 Ensembl:ENSSSCT00000014494 Uniprot:F1SHJ9
Length = 613
Score = 318 (117.0 bits), Expect = 7.6e-64, Sum P(3) = 7.6e-64
Identities = 77/223 (34%), Positives = 119/223 (53%)
Query: 75 GSHPP-RYQPCKTLLNFRDLSGLPPRPKEDIDFRHVTFGTMSESLQREVSLFQTVPKPEQ 133
G PP Y+ + L++ +L P +P + + + + +Q VP E+
Sbjct: 182 GQKPPLTYKRFQALISRMEL---PKKPVGSVTSQQME--SCRAEIQENHDETYGVPSLEE 236
Query: 134 FHKYPEMDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQS 193
+P G P + W GGETEAL +L++ L E +++ + + L PT S
Sbjct: 237 LG-FPTEGLG-PAV-WQGGETEALARLDKHL--ERKAWVANYERPRMNANSLLASPTGLS 291
Query: 194 AALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEK 253
L+FGCLS R FY+ L D + + P ++ GQL+WRE+FYT + +NP +D+ME
Sbjct: 292 PYLRFGCLSCRLFYYRLWDLYKKVKRNSTPP-LSLFGQLLWREFFYTAATNNPRFDRMEG 350
Query: 254 NPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
NPIC+ IPW + +P L W G+TG+P+IDA+M QLR+
Sbjct: 351 NPICIQIPW--DRNPEA---LAKWAEGKTGFPWIDAIMTQLRQ 388
Score = 246 (91.7 bits), Expect = 7.6e-64, Sum P(3) = 7.6e-64
Identities = 43/76 (56%), Positives = 54/76 (71%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP G YI+RY+P+L+ FP +YIYEPW AP VQ+ A CII DYP I
Sbjct: 450 HCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESVQKAAKCIIGVDYPRPI 509
Query: 362 VNHVQASLENKQYLKK 377
VNH + S N + +K+
Sbjct: 510 VNHAETSRLNIERMKQ 525
Score = 138 (53.6 bits), Expect = 7.6e-64, Sum P(3) = 7.6e-64
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F + +G NR+RFLL+ L DLD L+ +LF+V+G P +F RE T+L FE
Sbjct: 80 FAASSSVGINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPGYSREWGVTRLTFEY 139
Query: 62 DCE 64
D E
Sbjct: 140 DSE 142
Score = 76 (31.8 bits), Expect = 4.4e-46, Sum P(3) = 4.4e-46
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 355 KDYPERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQASLENKQNVK 407
K +P R + + E+ Q + A CII DYP IVNH + S N + +K
Sbjct: 476 KGFPSRYIYEPWNAPESVQ----KAAKCIIGVDYPRPIVNHAETSRLNIERMK 524
>UNIPROTKB|B4DZD6 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9606 "Homo sapiens"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005739 GO:GO:0005634 GO:GO:0005737
GO:GO:0007623 GO:GO:0006281 GO:GO:0042752 GO:GO:0006606
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AC068385
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOVERGEN:HBG053470 CTD:1408 IPI:IPI00216898
RefSeq:NP_066940.2 UniGene:Hs.532491 DNASU:1408 GeneID:1408
KEGG:hsa:1408 HGNC:HGNC:2385 PharmGKB:PA26905 GenomeRNAi:1408
NextBio:5757 OMA:LCKHLLI EMBL:AK302865 ProteinModelPortal:B4DZD6
SMR:B4DZD6 STRING:B4DZD6 PRIDE:B4DZD6 Ensembl:ENST00000443527
UCSC:uc010rgn.2 ArrayExpress:B4DZD6 Bgee:B4DZD6 Uniprot:B4DZD6
Length = 614
Score = 315 (115.9 bits), Expect = 8.3e-64, Sum P(3) = 8.3e-64
Identities = 80/219 (36%), Positives = 120/219 (54%)
Query: 82 QPCKTLLNFRDLSGLPPRPKEDIDFRHVTFGTMSESLQREV--SLFQT--VPKPEQFHKY 137
+P T F+ + PK+ + VT M ES + E+ + +T VP E+ +
Sbjct: 185 KPPLTYKRFQAIISRMELPKKPVGL--VTSQQM-ESCRAEIQENHDETYGVPSLEELG-F 240
Query: 138 PEMDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQSAALK 197
P G P + W GGETEAL +L++ L E +++ + + L PT S L+
Sbjct: 241 PTEGLG-PAV-WQGGETEALARLDKHL--ERKAWVANYERPRMNANSLLASPTGLSPYLR 296
Query: 198 FGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPIC 257
FGCLS R FY+ L D + + P ++ GQL+WRE+FYT + +NP +D+ME NPIC
Sbjct: 297 FGCLSCRLFYYRLWDLYKKVKRNSTPP-LSLFGQLLWREFFYTAATNNPRFDRMEGNPIC 355
Query: 258 LNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
+ IPW + +P L W G+TG+P+IDA+M QLR+
Sbjct: 356 IQIPW--DRNPEA---LAKWAEGKTGFPWIDAIMTQLRQ 389
Score = 246 (91.7 bits), Expect = 8.3e-64, Sum P(3) = 8.3e-64
Identities = 42/76 (55%), Positives = 54/76 (71%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP G YI+RY+P+L+ FP +YIYEPW AP +Q+ A CII DYP I
Sbjct: 451 HCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWNAPESIQKAAKCIIGVDYPRPI 510
Query: 362 VNHVQASLENKQYLKK 377
VNH + S N + +K+
Sbjct: 511 VNHAETSRLNIERMKQ 526
Score = 141 (54.7 bits), Expect = 8.3e-64, Sum P(3) = 8.3e-64
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F + +G NR+RFLL+ L DLD L+ +LF+V+G P +F +L +E T+L FE
Sbjct: 81 FAASSSVGINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEY 140
Query: 62 DCE 64
D E
Sbjct: 141 DSE 143
Score = 74 (31.1 bits), Expect = 7.9e-46, Sum P(3) = 7.9e-46
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 355 KDYPERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQASLENKQNVK 407
K +P R + + E+ Q + A CII DYP IVNH + S N + +K
Sbjct: 477 KAFPSRYIYEPWNAPESIQ----KAAKCIIGVDYPRPIVNHAETSRLNIERMK 525
>UNIPROTKB|F1NYE9 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
IPI:IPI00577266 GeneTree:ENSGT00500000044813 EMBL:AADN02006287
EMBL:AADN02006288 EMBL:AADN02006289 Ensembl:ENSGALT00000020627
ArrayExpress:F1NYE9 Uniprot:F1NYE9
Length = 621
Score = 306 (112.8 bits), Expect = 2.3e-63, Sum P(3) = 2.3e-63
Identities = 65/156 (41%), Positives = 93/156 (59%)
Query: 143 GDPLIRWLGGETEALIKLNERLSQE--IESFKSGVYLSNQVSPDLTGPPTSQSAALKFGC 200
G P W GGETEAL +L L ++ + +F+ +N L PT S L+FGC
Sbjct: 204 GLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS----LLASPTGLSPYLRFGC 259
Query: 201 LSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNI 260
LS R FY+ L D + + + P ++ GQL+WRE+FYT + +NP +D+ME NPIC+ I
Sbjct: 260 LSCRLFYFKLTDLYKKVKKNSSPP-LSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQI 318
Query: 261 PWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
PW + +P L W G+TG+P+IDA+M QLR+
Sbjct: 319 PW--DKNPEA---LAKWAEGRTGFPWIDAIMTQLRQ 349
Score = 241 (89.9 bits), Expect = 2.3e-63, Sum P(3) = 2.3e-63
Identities = 41/76 (53%), Positives = 56/76 (73%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP+G YI+RY+P LR FP +YIY+PW AP VQ+ A C+I +YP+ +
Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESVQKAAKCVIGVNYPKPM 470
Query: 362 VNHVQASLENKQYLKK 377
VNH +AS N + +K+
Sbjct: 471 VNHAEASRLNIERMKQ 486
Score = 152 (58.6 bits), Expect = 2.3e-63, Sum P(3) = 2.3e-63
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F G+ ++G NR+RFLL+CL DLD L+ +LF+++G P +F +L +E + KL E
Sbjct: 41 FAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWSIAKLSIEY 100
Query: 62 DCE 64
D E
Sbjct: 101 DSE 103
Score = 68 (29.0 bits), Expect = 2.7e-45, Sum P(3) = 2.7e-45
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 377 KEKANCIINKDYPERIVNHVQASLENKQNVK 407
++ A C+I +YP+ +VNH +AS N + +K
Sbjct: 455 QKAAKCVIGVNYPKPMVNHAEASRLNIERMK 485
Score = 38 (18.4 bits), Expect = 1.9e-51, Sum P(3) = 1.9e-51
Identities = 23/82 (28%), Positives = 34/82 (41%)
Query: 20 LADLDRQLKSHGGQLFIVQGSPISI--FQKLKRELNFTKLCFEQDCEGVKPYQSFPTGS- 76
L DLD+ ++ +GGQ P++ FQ L + ++ E V + P
Sbjct: 132 LYDLDKIIELNGGQ------PPLTYKRFQTLISRMEPLEMPVETITPEVMQKCTTPVSDD 185
Query: 77 HPPRYQ-PCKTLLNFRDLSGLP 97
H +Y P L F D GLP
Sbjct: 186 HDEKYGVPSLEELGF-DTDGLP 206
>UNIPROTKB|Q8QG61 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
EMBL:AY034432 IPI:IPI00577266 RefSeq:NP_989576.1 UniGene:Gga.4107
ProteinModelPortal:Q8QG61 STRING:Q8QG61 GeneID:374093
KEGG:gga:374093 CTD:1407 HOVERGEN:HBG053470 NextBio:20813612
Uniprot:Q8QG61
Length = 621
Score = 306 (112.8 bits), Expect = 2.3e-63, Sum P(3) = 2.3e-63
Identities = 65/156 (41%), Positives = 93/156 (59%)
Query: 143 GDPLIRWLGGETEALIKLNERLSQE--IESFKSGVYLSNQVSPDLTGPPTSQSAALKFGC 200
G P W GGETEAL +L L ++ + +F+ +N L PT S L+FGC
Sbjct: 204 GLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS----LLASPTGLSPYLRFGC 259
Query: 201 LSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNI 260
LS R FY+ L D + + + P ++ GQL+WRE+FYT + +NP +D+ME NPIC+ I
Sbjct: 260 LSCRLFYFKLTDLYKKVKKNSSPP-LSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQI 318
Query: 261 PWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
PW + +P L W G+TG+P+IDA+M QLR+
Sbjct: 319 PW--DKNPEA---LAKWAEGRTGFPWIDAIMTQLRQ 349
Score = 241 (89.9 bits), Expect = 2.3e-63, Sum P(3) = 2.3e-63
Identities = 41/76 (53%), Positives = 56/76 (73%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP+G YI+RY+P LR FP +YIY+PW AP VQ+ A C+I +YP+ +
Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESVQKAAKCVIGVNYPKPM 470
Query: 362 VNHVQASLENKQYLKK 377
VNH +AS N + +K+
Sbjct: 471 VNHAEASRLNIERMKQ 486
Score = 152 (58.6 bits), Expect = 2.3e-63, Sum P(3) = 2.3e-63
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F G+ ++G NR+RFLL+CL DLD L+ +LF+++G P +F +L +E + KL E
Sbjct: 41 FAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWSIAKLSIEY 100
Query: 62 DCE 64
D E
Sbjct: 101 DSE 103
Score = 68 (29.0 bits), Expect = 2.7e-45, Sum P(3) = 2.7e-45
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 377 KEKANCIINKDYPERIVNHVQASLENKQNVK 407
++ A C+I +YP+ +VNH +AS N + +K
Sbjct: 455 QKAAKCVIGVNYPKPMVNHAEASRLNIERMK 485
Score = 38 (18.4 bits), Expect = 1.9e-51, Sum P(3) = 1.9e-51
Identities = 23/82 (28%), Positives = 34/82 (41%)
Query: 20 LADLDRQLKSHGGQLFIVQGSPISI--FQKLKRELNFTKLCFEQDCEGVKPYQSFPTGS- 76
L DLD+ ++ +GGQ P++ FQ L + ++ E V + P
Sbjct: 132 LYDLDKIIELNGGQ------PPLTYKRFQTLISRMEPLEMPVETITPEVMQKCTTPVSDD 185
Query: 77 HPPRYQ-PCKTLLNFRDLSGLP 97
H +Y P L F D GLP
Sbjct: 186 HDEKYGVPSLEELGF-DTDGLP 206
>UNIPROTKB|E1C2Z9 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0042752 "regulation of circadian rhythm" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:AADN02006287 EMBL:AADN02006288 EMBL:AADN02006289
IPI:IPI00821281 Ensembl:ENSGALT00000037715 ArrayExpress:E1C2Z9
Uniprot:E1C2Z9
Length = 624
Score = 306 (112.8 bits), Expect = 2.4e-63, Sum P(3) = 2.4e-63
Identities = 65/156 (41%), Positives = 93/156 (59%)
Query: 143 GDPLIRWLGGETEALIKLNERLSQE--IESFKSGVYLSNQVSPDLTGPPTSQSAALKFGC 200
G P W GGETEAL +L L ++ + +F+ +N L PT S L+FGC
Sbjct: 204 GLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS----LLASPTGLSPYLRFGC 259
Query: 201 LSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNI 260
LS R FY+ L D + + + P ++ GQL+WRE+FYT + +NP +D+ME NPIC+ I
Sbjct: 260 LSCRLFYFKLTDLYKKVKKNSSPP-LSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQI 318
Query: 261 PWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
PW + +P L W G+TG+P+IDA+M QLR+
Sbjct: 319 PW--DKNPEA---LAKWAEGRTGFPWIDAIMTQLRQ 349
Score = 241 (89.9 bits), Expect = 2.4e-63, Sum P(3) = 2.4e-63
Identities = 41/76 (53%), Positives = 56/76 (73%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP+G YI+RY+P LR FP +YIY+PW AP VQ+ A C+I +YP+ +
Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESVQKAAKCVIGVNYPKPM 470
Query: 362 VNHVQASLENKQYLKK 377
VNH +AS N + +K+
Sbjct: 471 VNHAEASRLNIERMKQ 486
Score = 152 (58.6 bits), Expect = 2.4e-63, Sum P(3) = 2.4e-63
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F G+ ++G NR+RFLL+CL DLD L+ +LF+++G P +F +L +E + KL E
Sbjct: 41 FAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWSIAKLSIEY 100
Query: 62 DCE 64
D E
Sbjct: 101 DSE 103
Score = 68 (29.0 bits), Expect = 2.9e-45, Sum P(3) = 2.9e-45
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 377 KEKANCIINKDYPERIVNHVQASLENKQNVK 407
++ A C+I +YP+ +VNH +AS N + +K
Sbjct: 455 QKAAKCVIGVNYPKPMVNHAEASRLNIERMK 485
Score = 38 (18.4 bits), Expect = 2.0e-51, Sum P(3) = 2.0e-51
Identities = 23/82 (28%), Positives = 34/82 (41%)
Query: 20 LADLDRQLKSHGGQLFIVQGSPISI--FQKLKRELNFTKLCFEQDCEGVKPYQSFPTGS- 76
L DLD+ ++ +GGQ P++ FQ L + ++ E V + P
Sbjct: 132 LYDLDKIIELNGGQ------PPLTYKRFQTLISRMEPLEMPVETITPEVMQKCTTPVSDD 185
Query: 77 HPPRYQ-PCKTLLNFRDLSGLP 97
H +Y P L F D GLP
Sbjct: 186 HDEKYGVPSLEELGF-DTDGLP 206
>ZFIN|ZDB-GENE-010426-3 [details] [associations]
symbol:cry1b "cryptochrome 1b" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-3
GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470 EMBL:AB042249
IPI:IPI00863245 UniGene:Dr.158985 ProteinModelPortal:Q9I916
STRING:Q9I916 ArrayExpress:Q9I916 Uniprot:Q9I916
Length = 606
Score = 314 (115.6 bits), Expect = 3.2e-63, Sum P(3) = 3.2e-63
Identities = 65/150 (43%), Positives = 93/150 (62%)
Query: 149 WLGGETEALIKLNERLSQE--IESFKSGVYLSNQVSPDLTGPPTSQSAALKFGCLSVRRF 206
W GGETEAL +L L ++ + +F+ +N L PT S L+FGCLS R F
Sbjct: 210 WPGGETEALTRLERHLERKAWVANFERPRMNANS----LLASPTGLSPYLRFGCLSCRLF 265
Query: 207 YWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNIPWLPES 266
Y+ L D + + + PS ++ GQL+WRE+FYT + +NP++D+ME NPIC+ IPW +
Sbjct: 266 YFKLTDLYRKVKKNSTPS-LSLYGQLLWREFFYTAATNNPHFDKMEFNPICVQIPW--DR 322
Query: 267 HPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
+P L W GQTG+P+IDA+M QLR+
Sbjct: 323 NPEA---LAKWAEGQTGFPWIDAIMTQLRQ 349
Score = 235 (87.8 bits), Expect = 3.2e-63, Sum P(3) = 3.2e-63
Identities = 42/83 (50%), Positives = 59/83 (71%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP+G YI+RY+P LR FP ++IY+PW AP VQ+ A CII YP+ +
Sbjct: 411 HCYCPVGFGRRTDPNGDYIRRYLPILRGFPAKFIYDPWNAPESVQKVAKCIIGVHYPKPM 470
Query: 362 VNHVQASLENKQYLKK--EKANC 382
VNH +AS N + +K+ ++ +C
Sbjct: 471 VNHAEASRINIERMKQIYQQLSC 493
Score = 147 (56.8 bits), Expect = 3.2e-63, Sum P(3) = 3.2e-63
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F G+ ++G +R+RFLL+CL DLD L+ +LF+++G P +F +L +E ++L +E
Sbjct: 41 FAGSSNVGISRWRFLLQCLEDLDASLRKLNSRLFVIRGQPTDVFPRLFKEWKISRLSYEY 100
Query: 62 DCE 64
D E
Sbjct: 101 DSE 103
Score = 66 (28.3 bits), Expect = 1.4e-45, Sum P(3) = 1.4e-45
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 380 ANCIINKDYPERIVNHVQASLENKQNVK 407
A CII YP+ +VNH +AS N + +K
Sbjct: 458 AKCIIGVHYPKPMVNHAEASRINIERMK 485
Score = 45 (20.9 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 83 PCKTLLNFRDLSGLPPRPKEDIDFRHVTFGTMSESLQREVSLFQTVPKPEQ 133
P T N D +G P + + H+T T+ S Q E F V + +Q
Sbjct: 504 PSNTANN-EDSNGAGPSSGDTQESTHITVHTLPASSQSEFPAF-AVSRGQQ 552
Score = 37 (18.1 bits), Expect = 1.0e-51, Sum P(3) = 1.0e-51
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 9 GYNRFRFLLECLADLDRQLKSHGGQ 33
G F + L DLD+ ++ +GGQ
Sbjct: 121 GVEVFVRISHTLYDLDKIIEFNGGQ 145
>UNIPROTKB|F1PNC9 [details] [associations]
symbol:CRY2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 CTD:1408 OMA:LCKHLLI EMBL:AAEX03011505
RefSeq:XP_540761.2 Ensembl:ENSCAFT00000014927 GeneID:483641
KEGG:cfa:483641 Uniprot:F1PNC9
Length = 593
Score = 313 (115.2 bits), Expect = 3.3e-63, Sum P(3) = 3.3e-63
Identities = 68/169 (40%), Positives = 99/169 (58%)
Query: 128 VPKPEQFHKYPEMDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTG 187
VP E+ +P G P + W GGETEAL +L++ L E +++ + + L
Sbjct: 211 VPSLEELG-FPTEGLG-PAV-WQGGETEALARLDKHL--ERKAWVANYERPRMNANSLLA 265
Query: 188 PPTSQSAALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPY 247
PT S L+FGCLS R FY+ L D + + P ++ GQL+WRE+FYT + +NP
Sbjct: 266 SPTGLSPYLRFGCLSCRLFYYRLWDLYKKVKRNSTPP-LSLFGQLLWREFFYTAATNNPR 324
Query: 248 YDQMEKNPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
+D+ME NPIC+ IPW + +P L W G+TG+P+IDA+M QLR+
Sbjct: 325 FDRMEGNPICIQIPW--DRNPEA---LAKWAEGKTGFPWIDAIMTQLRQ 368
Score = 241 (89.9 bits), Expect = 3.3e-63, Sum P(3) = 3.3e-63
Identities = 42/76 (55%), Positives = 53/76 (69%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP G YI+RY+P L+ FP +YIYEPW AP +Q+ A CII DYP I
Sbjct: 430 HCYCPVGFGRRTDPSGDYIRRYLPILKGFPSRYIYEPWNAPESIQKAAKCIIGVDYPRPI 489
Query: 362 VNHVQASLENKQYLKK 377
VNH + S N + +K+
Sbjct: 490 VNHAETSRLNIERMKQ 505
Score = 141 (54.7 bits), Expect = 3.3e-63, Sum P(3) = 3.3e-63
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F + +G NR+RFLL+ L DLD L+ +LF+V+G P +F +L +E T+L FE
Sbjct: 60 FAASSSVGINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEY 119
Query: 62 DCE 64
D E
Sbjct: 120 DSE 122
Score = 77 (32.2 bits), Expect = 4.5e-46, Sum P(3) = 4.5e-46
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 353 ISKDYPERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQASLENKQNVK 407
I K +P R + + E+ Q + A CII DYP IVNH + S N + +K
Sbjct: 454 ILKGFPSRYIYEPWNAPESIQ----KAAKCIIGVDYPRPIVNHAETSRLNIERMK 504
>ZFIN|ZDB-GENE-010426-2 [details] [associations]
symbol:cry1a "cryptochrome 1a" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IDA] [GO:0042542
"response to hydrogen peroxide" evidence=IEP] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-2
GO:GO:0045892 GO:GO:0009649 GO:GO:0006281 GO:GO:0005667
GO:GO:0009416 GO:GO:0042542 Gene3D:3.40.50.620 InterPro:IPR014729
KO:K02295 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 EMBL:BC124762 IPI:IPI00650675 UniGene:Dr.82313
ProteinModelPortal:Q08BE4 STRING:Q08BE4 KEGG:dre:100003956
InParanoid:Q08BE4 NextBio:20786059 ArrayExpress:Q08BE4
Uniprot:Q08BE4
Length = 619
Score = 303 (111.7 bits), Expect = 2.6e-62, Sum P(3) = 2.6e-62
Identities = 63/150 (42%), Positives = 91/150 (60%)
Query: 149 WLGGETEALIKLNERLSQE--IESFKSGVYLSNQVSPDLTGPPTSQSAALKFGCLSVRRF 206
W GGETEAL +L L ++ + +F+ +N L PT S L+FGCLS R F
Sbjct: 210 WPGGETEALTRLERHLERKAWVANFERPRMNANS----LLASPTGLSPYLRFGCLSCRLF 265
Query: 207 YWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNIPWLPES 266
Y+ L D + + + P ++ GQL+WRE+FYT + +NP +D+ME NPIC+ IPW +
Sbjct: 266 YFKLTDLYRKVKKNSSPP-LSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPW--DK 322
Query: 267 HPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
+P L W G+TG+P+IDA+M QLR+
Sbjct: 323 NPEA---LAKWAEGRTGFPWIDAIMTQLRQ 349
Score = 234 (87.4 bits), Expect = 2.6e-62, Sum P(3) = 2.6e-62
Identities = 42/83 (50%), Positives = 59/83 (71%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV+FGRR DP+G YI+RY+P LR FP +YIY+PW AP VQ+ A CII YP +
Sbjct: 411 HCYCPVSFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESVQKAAKCIIGVHYPMPM 470
Query: 362 VNHVQASLENKQYLKK--EKANC 382
V+H +AS N + +K+ ++ +C
Sbjct: 471 VHHAEASRLNIERMKQIYQQLSC 493
Score = 152 (58.6 bits), Expect = 2.6e-62, Sum P(3) = 2.6e-62
Identities = 26/63 (41%), Positives = 42/63 (66%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F G+ ++G +R+RFLL+CL DLD L+ +LF+++G P +F +L +E N +L +E
Sbjct: 41 FAGSSNVGISRWRFLLQCLEDLDASLRKLNSRLFVIRGQPTDVFPRLFKEWNINRLSYEY 100
Query: 62 DCE 64
D E
Sbjct: 101 DSE 103
Score = 59 (25.8 bits), Expect = 5.0e-44, Sum P(3) = 5.0e-44
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 377 KEKANCIINKDYPERIVNHVQASLENKQNVK 407
++ A CII YP +V+H +AS N + +K
Sbjct: 455 QKAAKCIIGVHYPMPMVHHAEASRLNIERMK 485
>ZFIN|ZDB-GENE-010426-4 [details] [associations]
symbol:cry2a "cryptochrome 2a" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009266 "response to
temperature stimulus" evidence=IDA] [GO:0009416 "response to light
stimulus" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-4
GO:GO:0006281 GO:GO:0009416 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0009266 EMBL:BX927144 eggNOG:COG0415 HOGENOM:HOG000245622
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470
GeneTree:ENSGT00500000044813 OrthoDB:EOG4DBTDC EMBL:BX784023
IPI:IPI00501773 UniGene:Dr.116325 Ensembl:ENSDART00000100222
Uniprot:B0S7X5
Length = 659
Score = 296 (109.3 bits), Expect = 2.4e-59, Sum P(3) = 2.4e-59
Identities = 79/226 (34%), Positives = 116/226 (51%)
Query: 75 GSHPP-RYQPCKTLLNFRDLSGLPPR-PKEDIDFRHVTFGTMSESLQREVSLFQTVPKPE 132
G PP Y+ +TL++ D PP P E + + G + + VP E
Sbjct: 143 GGQPPLTYKRFQTLISRMD----PPEMPVETLS--NSIMGCCVTPVSEDHGDKYGVPSLE 196
Query: 133 QFHKYPEMDFGDPLIRWLGGETEALIKLNERLSQE--IESFKSGVYLSNQVSPDLTGPPT 190
+ E G P W GGETEAL ++ L ++ + +F+ +N L PT
Sbjct: 197 ELGFDIE---GLPSAVWPGGETEALTRIERHLERKAWVANFERPRMNANS----LLASPT 249
Query: 191 SQSAALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQ 250
S L+FGCLS R FY+ L D + + + P ++ GQL+WRE+FYT + NP +D+
Sbjct: 250 GLSPYLRFGCLSCRLFYFKLTDLYRKVKKTSTPP-LSLYGQLLWREFFYTAATTNPRFDK 308
Query: 251 MEKNPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
ME NPIC+ IPW + +P L W +TG+P+IDA+M QLR+
Sbjct: 309 MEGNPICVRIPW--DKNPEA---LAKWAEAKTGFPWIDAIMTQLRQ 349
Score = 232 (86.7 bits), Expect = 2.4e-59, Sum P(3) = 2.4e-59
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP+G +I+RY+P LR FP +YIY+PW AP VQ A CII YP+ +
Sbjct: 411 HCYCPVGFGRRTDPNGDFIRRYLPILRGFPAKYIYDPWNAPDSVQAAAKCIIGVHYPKPM 470
Query: 362 VNHVQASLENKQYLKK 377
VNH +AS N + +K+
Sbjct: 471 VNHAEASRLNIERMKQ 486
Score = 155 (59.6 bits), Expect = 2.4e-59, Sum P(3) = 2.4e-59
Identities = 28/63 (44%), Positives = 43/63 (68%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F G+ ++G NR+RFLL+CL DLD L+ +LF+V+G P ++F +L +E ++L FE
Sbjct: 41 FAGSSNLGVNRWRFLLQCLDDLDSNLRKLNSRLFVVRGQPANVFPRLFKEWKISRLTFEY 100
Query: 62 DCE 64
D E
Sbjct: 101 DSE 103
Score = 66 (28.3 bits), Expect = 5.3e-42, Sum P(3) = 5.3e-42
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 380 ANCIINKDYPERIVNHVQASLENKQNVK 407
A CII YP+ +VNH +AS N + +K
Sbjct: 458 AKCIIGVHYPKPMVNHAEASRLNIERMK 485
>UNIPROTKB|F1MXB2 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:DAAA02013749 EMBL:DAAA02013752 EMBL:DAAA02013750
EMBL:DAAA02013751 IPI:IPI00868590 Ensembl:ENSBTAT00000057061
Uniprot:F1MXB2
Length = 587
Score = 306 (112.8 bits), Expect = 1.2e-57, Sum P(3) = 1.2e-57
Identities = 65/156 (41%), Positives = 93/156 (59%)
Query: 143 GDPLIRWLGGETEALIKLNERLSQE--IESFKSGVYLSNQVSPDLTGPPTSQSAALKFGC 200
G P W GGETEAL +L L ++ + +F+ +N L PT S L+FGC
Sbjct: 204 GLPSAVWPGGETEALTRLERHLERKAWVANFERPRMNANS----LLASPTGLSPYLRFGC 259
Query: 201 LSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNI 260
LS R FY+ L D + + + P ++ GQL+WRE+FYT + +NP +D+ME NPIC+ I
Sbjct: 260 LSCRLFYFKLTDLYKKVKKNSSPP-LSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQI 318
Query: 261 PWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
PW + +P L W G+TG+P+IDA+M QLR+
Sbjct: 319 PW--DKNPEA---LAKWAEGRTGFPWIDAIMTQLRQ 349
Score = 174 (66.3 bits), Expect = 1.2e-57, Sum P(3) = 1.2e-57
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 306 PVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERIVNHV 365
P+ G R + G +RY+P LR FP +YIY+PW AP G+Q+ A C+I +YP+ +VNH
Sbjct: 415 PLLMGSRDEEKGNNKRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPMVNHA 474
Query: 366 QASLENKQYLKK 377
+AS N + +K+
Sbjct: 475 EASRLNIERMKQ 486
Score = 162 (62.1 bits), Expect = 1.2e-57, Sum P(3) = 1.2e-57
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F G+ ++G NR+RFLL+CL DLD L+ +LF+++G P +F +L +E N TKL E
Sbjct: 41 FAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEY 100
Query: 62 DCE 64
D E
Sbjct: 101 DSE 103
Score = 66 (28.3 bits), Expect = 2.4e-46, Sum P(3) = 2.4e-46
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 380 ANCIINKDYPERIVNHVQASLENKQNVK 407
A C+I +YP+ +VNH +AS N + +K
Sbjct: 458 AKCLIGVNYPKPMVNHAEASRLNIERMK 485
Score = 38 (18.4 bits), Expect = 1.1e-44, Sum P(3) = 1.1e-44
Identities = 23/82 (28%), Positives = 36/82 (43%)
Query: 20 LADLDRQLKSHGGQLFIVQGSPISI--FQKLKRELNFTKLCFEQDCEGVKPYQSFP-TGS 76
L DLD+ ++ +GGQ P++ FQ L ++ ++ E V + P +
Sbjct: 132 LYDLDKIIELNGGQ------PPLTYKRFQTLISKMEPLEIPVETITSEVIEKCTTPLSDD 185
Query: 77 HPPRYQ-PCKTLLNFRDLSGLP 97
H +Y P L F D GLP
Sbjct: 186 HDEKYGVPSLEELGF-DTDGLP 206
>UNIPROTKB|F1N0J9 [details] [associations]
symbol:Bt.20450 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913
"DNA photolyase activity" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
EMBL:DAAA02041566 EMBL:DAAA02041564 EMBL:DAAA02041565
IPI:IPI00698451 Ensembl:ENSBTAT00000028277 OMA:DIQENHD
Uniprot:F1N0J9
Length = 610
Score = 320 (117.7 bits), Expect = 1.1e-54, Sum P(3) = 1.1e-54
Identities = 78/223 (34%), Positives = 121/223 (54%)
Query: 75 GSHPP-RYQPCKTLLNFRDLSGLPPRPKEDIDFRHVTFGTMSESLQREVSLFQTVPKPEQ 133
G PP Y+ + +++ +L P +P + + + G +E +Q VP E+
Sbjct: 179 GQKPPLTYKRFQAIISRMEL---PRKPVGSVTSQQME-GCRAE-IQESHDETYGVPSLEE 233
Query: 134 FHKYPEMDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQS 193
+P G P + W GGETEAL +L++ L E +++ + + L PT S
Sbjct: 234 LG-FPTEGLG-PAV-WQGGETEALARLDKHL--ERKAWVANYERPRMNANSLLASPTGLS 288
Query: 194 AALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEK 253
L+FGCLS R FY+ L D + + P ++ GQL+WRE+FYT + +NP +D+ME
Sbjct: 289 PYLRFGCLSCRLFYYRLWDLYKKVKRNSTPP-LSLFGQLLWREFFYTAATNNPRFDRMEG 347
Query: 254 NPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
NPIC+ IPW + +P L W G+TG+P+IDA+M QLR+
Sbjct: 348 NPICIQIPW--DRNPEA---LAKWAEGKTGFPWIDAIMTQLRQ 385
Score = 248 (92.4 bits), Expect = 1.1e-54, Sum P(3) = 1.1e-54
Identities = 42/76 (55%), Positives = 55/76 (72%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR DP G YI+RY+P+L+ FP +YIYEPW AP +Q+ A C+I DYP I
Sbjct: 447 HCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESIQKAAKCVIGVDYPRPI 506
Query: 362 VNHVQASLENKQYLKK 377
VNH +AS N + +K+
Sbjct: 507 VNHAEASRLNIERMKQ 522
Score = 78 (32.5 bits), Expect = 5.9e-37, Sum P(3) = 5.9e-37
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 355 KDYPERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQASLENKQNVK 407
K +P R + + E+ Q + A C+I DYP IVNH +AS N + +K
Sbjct: 473 KGFPSRYIYEPWNAPESIQ----KAAKCVIGVDYPRPIVNHAEASRLNIERMK 521
Score = 46 (21.3 bits), Expect = 1.1e-54, Sum P(3) = 1.1e-54
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 2 FPGTMHIGYNRFR-FLLECLADLDRQLKSHGGQLFIVQGSPISIFQKL-KRELNFTKLCF 59
F + +G NR+R ++ + + + L+ G L P S L ++E T+L F
Sbjct: 77 FAASSSVGINRWRRYVKQGVEIKETVLRKTSGNLVSCWKVPSS--DSLPQQEWGVTRLTF 134
Query: 60 EQDCE 64
E D E
Sbjct: 135 EYDSE 139
>ZFIN|ZDB-GENE-010426-7 [details] [associations]
symbol:cry4 "cryptochrome 4" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009881 "photoreceptor
activity" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-7
GO:GO:0006281 GO:GO:0009881 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 EMBL:FP085425 IPI:IPI00995476
Ensembl:ENSDART00000126053 Uniprot:E7F1Z7
Length = 582
Score = 272 (100.8 bits), Expect = 2.9e-52, Sum P(3) = 2.9e-52
Identities = 77/246 (31%), Positives = 114/246 (46%)
Query: 55 TKLCFEQDCEGVKPYQSFPTGSHPPRYQPCKTLLNFRDLSGLPPRPKEDIDFRHVTFGTM 114
T C VK GS P Y K L+ + G P +P D+ F
Sbjct: 146 TYTCVSHTLYDVKRIVKANGGSPPLTY---KKFLHVLSVLGEPEKPARDVSIED--FQRR 200
Query: 115 SESLQREVSLFQTVPKPEQFHKYPEMDFGDPLIRWLGGETEALIKLNERL-SQE--IESF 171
+ +V VP E + + W GGE+ AL +L + SQ+ + +F
Sbjct: 201 QQQSMMDVDRVYAVPSLADLGLQVEAE-----VLWPGGESHALQRLEKHFQSQQGWVANF 255
Query: 172 KSGVYLSNQVSPDLTGPPTSQSAALKFGCLSVRRFYWALHDHF-NTIHEGRPPSHFNITG 230
+ N + P TG S L GCLSVR FY L+ + + + PP ++ G
Sbjct: 256 SKPRTIPNSLLPSTTG----LSPYLSLGCLSVRTFYHRLNSIYAQSKNHSLPP--VSLQG 309
Query: 231 QLIWREYFYTMSAHNPYYDQMEKNPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAV 290
Q++WRE+FYT+++ P + +ME N ICL I W + P + L W+ QTG+P+IDA+
Sbjct: 310 QVLWREFFYTVASATPNFTKMEGNSICLQIDWYHD--PER---LEKWRTAQTGFPWIDAI 364
Query: 291 MRQLRR 296
M QLR+
Sbjct: 365 MTQLRQ 370
Score = 244 (91.0 bits), Expect = 2.9e-52, Sum P(3) = 2.9e-52
Identities = 43/77 (55%), Positives = 54/77 (70%)
Query: 301 TYCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPER 360
T CPV FGRR DP G Y+++Y+P L+ FP QYIYEPWKAP VQ A CII KDYP
Sbjct: 431 TRIFCPVRFGRRTDPQGEYLRKYLPVLKNFPSQYIYEPWKAPEDVQLSAGCIIGKDYPRP 490
Query: 361 IVNHVQASLENKQYLKK 377
IV+H++AS N +++
Sbjct: 491 IVSHIEASQRNLALMRQ 507
Score = 122 (48.0 bits), Expect = 2.9e-52, Sum P(3) = 2.9e-52
Identities = 25/66 (37%), Positives = 44/66 (66%)
Query: 4 GTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQDC 63
G MH+G R+RFLL+ L DLD +L++ G +LF++ GS +I ++L + T++ ++ +
Sbjct: 65 GAMHMGALRWRFLLQSLEDLDTRLQAIGSRLFVLCGSTANILRELVAQWGITQISYDTE- 123
Query: 64 EGVKPY 69
V+PY
Sbjct: 124 --VEPY 127
Score = 82 (33.9 bits), Expect = 2.2e-35, Sum P(3) = 2.2e-35
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 353 ISKDYPERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQASLEN 402
+ K++P + + + E+ Q A CII KDYP IV+H++AS N
Sbjct: 456 VLKNFPSQYIYEPWKAPEDVQL----SAGCIIGKDYPRPIVSHIEASQRN 501
>ZFIN|ZDB-GENE-010426-5 [details] [associations]
symbol:cry2b "cryptochrome 2b" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-5
GO:GO:0045892 GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 EMBL:BC096780 EMBL:BC164795 IPI:IPI00498674
UniGene:Dr.31496 InParanoid:Q4V9Q3 Uniprot:Q4V9Q3
Length = 639
Score = 262 (97.3 bits), Expect = 1.6e-51, Sum P(3) = 1.6e-51
Identities = 55/149 (36%), Positives = 83/149 (55%)
Query: 149 WLGGETEALIKLNERLSQEIE-SFKSGVYLSNQVSPDLTGPPTSQSAALKFGCLSVRRFY 207
W GGE+EAL ++ L + +++ + L P S L+FGCLS R FY
Sbjct: 210 WPGGESEALKRMERHLGPDSTVAWQENFERPKMNASPLMASPLGLSPYLRFGCLSCRLFY 269
Query: 208 WALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNIPWLPESH 267
L + + + PS ++ +++WRE+FYT + +NP +D+ME NPIC+ IPW
Sbjct: 270 CKLTQLYKKVKKNMNPS-ISLYDKILWREFFYTAATNNPRFDRMEGNPICIRIPW----D 324
Query: 268 PNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
N E L W +TG+P+IDA+M QLR+
Sbjct: 325 RNAEA-LAKWAEAKTGFPWIDAIMMQLRQ 352
Score = 239 (89.2 bits), Expect = 1.6e-51, Sum P(3) = 1.6e-51
Identities = 40/76 (52%), Positives = 56/76 (73%)
Query: 302 YCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERI 361
+C CPV FGRR+DP+G +I+RY+P LR FP +YIY+PW AP VQ A C+I DYP+ +
Sbjct: 414 HCYCPVGFGRRIDPNGDFIRRYLPVLRDFPAKYIYDPWNAPHDVQLAAKCVIGVDYPKPM 473
Query: 362 VNHVQASLENKQYLKK 377
VNH +AS N + +++
Sbjct: 474 VNHAEASRLNIERMRQ 489
Score = 137 (53.3 bits), Expect = 1.6e-51, Sum P(3) = 1.6e-51
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
F G ++G NR+RFLL+ L DLD L+ LF+++G P IF +L +E ++L FE
Sbjct: 41 FAGASNLGVNRWRFLLQSLEDLDASLRKLNSCLFVIRGQPADIFPRLFKEWKVSRLTFEF 100
Query: 62 DCE 64
D E
Sbjct: 101 DSE 103
Score = 69 (29.3 bits), Expect = 8.1e-34, Sum P(3) = 8.1e-34
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 380 ANCIINKDYPERIVNHVQASLENKQNVK 407
A C+I DYP+ +VNH +AS N + ++
Sbjct: 461 AKCVIGVDYPKPMVNHAEASRLNIERMR 488
Score = 39 (18.8 bits), Expect = 2.6e-41, Sum P(3) = 2.6e-41
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 20 LADLDRQLKSHGGQ 33
L DLDR ++ +GGQ
Sbjct: 132 LYDLDRIIELNGGQ 145
>FB|FBgn0016054 [details] [associations]
symbol:phr6-4 "(6-4)-photolyase" species:7227 "Drosophila
melanogaster" [GO:0006281 "DNA repair" evidence=ISS] [GO:0003914
"DNA (6-4) photolyase activity" evidence=ISS;NAS]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
EMBL:AE014134 GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 OMA:CLSARTF
EMBL:BT044074 RefSeq:NP_477188.1 RefSeq:NP_724274.1 UniGene:Dm.7857
SMR:Q0E8P0 STRING:Q0E8P0 EnsemblMetazoa:FBtr0081404
EnsemblMetazoa:FBtr0081405 GeneID:35322 KEGG:dme:Dmel_CG2488
UCSC:CG2488-RA CTD:35322 FlyBase:FBgn0016054 InParanoid:Q0E8P0
OrthoDB:EOG49W0WG GenomeRNAi:35322 NextBio:792949 Uniprot:Q0E8P0
Length = 540
Score = 288 (106.4 bits), Expect = 1.1e-50, Sum P(3) = 1.1e-50
Identities = 70/183 (38%), Positives = 106/183 (57%)
Query: 116 ESLQREVSLFQTVPKPEQFHKYPEMDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGV 175
+ ++++ S P +Q K PE + G ++ GGETEAL ++ E L EI +
Sbjct: 190 DEVEQKDSAAYDCPTMKQLVKRPE-ELGPN--KFPGGETEALRRMEESLKDEIWVAR--- 243
Query: 176 YLSNQVSPDLTGPPTSQ-SAALKFGCLSVRRFYWALHDHFNTIHE-GRPPSHFNITGQLI 233
+ +P+ P T+ S LKFGCLS R F L + + +PP ++ GQL+
Sbjct: 244 FEKPNTAPNSLEPSTTVLSPYLKFGCLSARLFNQKLKEIIKRQPKHSQPP--VSLIGQLM 301
Query: 234 WREYFYTMSAHNPYYDQMEKNPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQ 293
WRE++YT++A P +D+M N C+ IPW + HP+ +L AW +G+TGYPFIDA+MRQ
Sbjct: 302 WREFYYTVAAAEPNFDRMLGNVYCMQIPW--QEHPD---HLEAWTHGRTGYPFIDAIMRQ 356
Query: 294 LRR 296
LR+
Sbjct: 357 LRQ 359
Score = 194 (73.4 bits), Expect = 1.1e-50, Sum P(3) = 1.1e-50
Identities = 40/98 (40%), Positives = 58/98 (59%)
Query: 306 PVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERIVNHV 365
PV FG++ DP G YI++YVPEL ++P IYEPWKA L Q C++ DYP RIV H
Sbjct: 425 PVAFGKKTDPQGHYIRKYVPELSKYPAGCIYEPWKASLVDQRAYGCVLGTDYPHRIVKH- 483
Query: 366 QASLENKQYLKKEKANCIINKDYPERIVNHVQASLENK 403
+ +K+ +K+ A +N++ R ++S E K
Sbjct: 484 --EVVHKENIKRMGAAYKVNREV--RTGKEEESSFEEK 517
Score = 126 (49.4 bits), Expect = 1.1e-50, Sum P(3) = 1.1e-50
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 6 MHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQDCEG 65
M +G NR+RFL + L DLD QL+ +LF+V+G P +F ++ + L FE D E
Sbjct: 54 MQVGANRWRFLQQTLEDLDNQLRKLNSRLFVVRGKPAEVFPRIFKSWRVEMLTFETDIE- 112
Query: 66 VKPY 69
PY
Sbjct: 113 --PY 114
>ZFIN|ZDB-GENE-010426-8 [details] [associations]
symbol:cry5 "cryptochrome 5" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA;IDA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=IDA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
ZFIN:ZDB-GENE-010426-8 GO:GO:0006281 GO:GO:0009416
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GO:GO:0003914 EMBL:BC044204 IPI:IPI00634330
UniGene:Dr.82314 ProteinModelPortal:Q7ZU36 STRING:Q7ZU36
InParanoid:Q7ZU36 OrthoDB:EOG4G4GQ9 ArrayExpress:Q7ZU36
Uniprot:Q7ZU36
Length = 545
Score = 254 (94.5 bits), Expect = 2.9e-50, Sum P(3) = 2.9e-50
Identities = 56/147 (38%), Positives = 88/147 (59%)
Query: 151 GGETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQ-SAALKFGCLSVRRFYWA 209
GGE EAL +L+E + + K + + SP+ P T+ S ++FGCLS R F+W
Sbjct: 238 GGEQEALRRLDEHMERTNWVCK---FEKPKTSPNSLIPSTTVLSPYVRFGCLSARIFWWR 294
Query: 210 LHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNIPWLPESHPN 269
L D + PP ++ GQL+WRE+FYT + P +++ME N C+ + W +++P
Sbjct: 295 LADVYRGKTHSDPP--VSLHGQLLWREFFYTTAVGIPNFNKMEGNSACVQVDW--DNNP- 349
Query: 270 KEKYLNAWKNGQTGYPFIDAVMRQLRR 296
++L AW+ +TG+PFIDA+M QLR+
Sbjct: 350 --EHLAAWREARTGFPFIDAIMTQLRQ 374
Score = 218 (81.8 bits), Expect = 2.9e-50, Sum P(3) = 2.9e-50
Identities = 42/103 (40%), Positives = 61/103 (59%)
Query: 306 PVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERIVNHV 365
P+ FG++ D G YIK+Y+P L++FP +YIYEPWKAP VQE+A CI+ KDYP IV+H
Sbjct: 440 PIAFGKKTDKHGDYIKKYLPVLKKFPTEYIYEPWKAPRSVQERAGCIVGKDYPRPIVDHE 499
Query: 366 QASLEN-----KQYLKKEKANCIINKDYPERIVNHVQASLENK 403
+N Y K+ + INK + ++ ++ K
Sbjct: 500 VVHKKNILRMKAAYAKRSPEDKTINKGEKRKASPSIKELVQKK 542
Score = 152 (58.6 bits), Expect = 2.9e-50, Sum P(3) = 2.9e-50
Identities = 32/68 (47%), Positives = 41/68 (60%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQ 61
FP IG NR+RFL+E L DLD LK +LF+V+GSP + KL ++ T+L FE
Sbjct: 67 FPKNTRIGINRWRFLIEALKDLDSSLKKLNSRLFVVRGSPTEVLPKLFKQWKITRLTFEV 126
Query: 62 DCEGVKPY 69
D E PY
Sbjct: 127 DTE---PY 131
Score = 70 (29.7 bits), Expect = 7.7e-35, Sum P(3) = 7.7e-35
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 377 KEKANCIINKDYPERIVNHVQASLENKQNV 406
+E+A CI+ KDYP IV+H + +K+N+
Sbjct: 480 QERAGCIVGKDYPRPIVDH---EVVHKKNI 506
>TAIR|locus:2093217 [details] [associations]
symbol:UVR3 "UV REPAIR DEFECTIVE 3" species:3702
"Arabidopsis thaliana" [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISS;IDA]
[GO:0009411 "response to UV" evidence=IMP] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050
Pfam:PF00875 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009411
GO:GO:0000166 GO:GO:0003677 GO:GO:0006281 EMBL:AB017071
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AB003687 EMBL:AB017331 IPI:IPI00545198
IPI:IPI00657032 RefSeq:NP_001030703.1 RefSeq:NP_566520.1
UniGene:At.188 PDB:3FY4 PDBsum:3FY4 ProteinModelPortal:O48652
SMR:O48652 STRING:O48652 EnsemblPlants:AT3G15620.1 GeneID:820804
KEGG:ath:AT3G15620 GeneFarm:1941 TAIR:At3g15620 InParanoid:O48652
OMA:CLSARTF PhylomeDB:O48652 ProtClustDB:CLSN2688412
BioCyc:MetaCyc:MONOMER-15021 EvolutionaryTrace:O48652
Genevestigator:O48652 GO:GO:0003914 Uniprot:O48652
Length = 556
Score = 255 (94.8 bits), Expect = 5.8e-49, Sum P(3) = 5.8e-49
Identities = 74/223 (33%), Positives = 113/223 (50%)
Query: 75 GSHPP-RYQPCKTLLNFRDLSGLPPRPKEDIDFRHVTFGTMSESLQREVSLFQTVPKPEQ 133
G PP YQ +F ++G P K ++ + + + + +S VP E+
Sbjct: 173 GGKPPLSYQ------SFLKVAGEPSCAKSELVMSYSSLPPIGDIGNLGIS---EVPSLEE 223
Query: 134 FHKYPEMDFGDPLIRWLGGETEALIKLNERLSQE--IESFKSGVYLSNQVSPDLTGPPTS 191
Y + + D + GGE+EAL +L + +S + + +F+ S L T
Sbjct: 224 LG-YKDDEQAD-WTPFRGGESEALKRLTKSISDKAWVANFEKP---KGDPSAFLKPATTV 278
Query: 192 QSAALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQM 251
S LKFGCLS R FY L + + + + P ++ GQL+WRE+FYT + P +D+M
Sbjct: 279 MSPYLKFGCLSSRYFYQCLQNIYKDVKKHTSPP-VSLLGQLLWREFFYTTAFGTPNFDKM 337
Query: 252 EKNPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQL 294
+ N IC IPW E H L AW++G+TGYP+IDA+M QL
Sbjct: 338 KGNRICKQIPW-NEDHA----MLAAWRDGKTGYPWIDAIMVQL 375
Score = 224 (83.9 bits), Expect = 5.8e-49, Sum P(3) = 5.8e-49
Identities = 39/68 (57%), Positives = 51/68 (75%)
Query: 306 PVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERIVNHV 365
P++FG++ DPDG YI+ ++P L+ P QYIYEPW APL VQ KANCI+ KDYP+ +V H
Sbjct: 443 PISFGKKYDPDGKYIRHFLPVLKDMPKQYIYEPWTAPLSVQTKANCIVGKDYPKPMVLHD 502
Query: 366 QASLENKQ 373
AS E K+
Sbjct: 503 SASKECKR 510
Score = 133 (51.9 bits), Expect = 5.8e-49, Sum P(3) = 5.8e-49
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 3 PGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQD 62
PG+ G NR RFLLE L DLD LK G +L + +G P + + +E +LCFE D
Sbjct: 72 PGSSRAGVNRIRFLLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVKRLCFEYD 131
Query: 63 CEGVKPY 69
+ PY
Sbjct: 132 TD---PY 135
Score = 77 (32.2 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 379 KANCIINKDYPERIVNHVQASLENKQNV 406
KANCI+ KDYP+ +V H AS E K+ +
Sbjct: 485 KANCIVGKDYPKPMVLHDSASKECKRKM 512
Score = 40 (19.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 14 RFLLECLADLDRQLKSHGGQLFIVQGSPISIF-QKLKRELNFT 55
R+ +CL ++ + +K H P+S+ Q L RE +T
Sbjct: 291 RYFYQCLQNIYKDVKKH-------TSPPVSLLGQLLWREFFYT 326
>UNIPROTKB|Q2TV23 [details] [associations]
symbol:LOC395100 "Cryptochrome-like protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
EMBL:AY300013 IPI:IPI00782853 RefSeq:NP_001034685.1
UniGene:Gga.5544 Ensembl:ENSGALT00000000143 GeneID:395100
KEGG:gga:395100 InParanoid:Q2TV23 OrthoDB:EOG479F6W
NextBio:20815193 Uniprot:Q2TV23
Length = 529
Score = 305 (112.4 bits), Expect = 1.0e-47, Sum P(2) = 1.0e-47
Identities = 96/319 (30%), Positives = 152/319 (47%)
Query: 5 TMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQDCE 64
+MHIG R+ FLL+ L DL L+ G L ++QG S+ + ++ N T++ + + E
Sbjct: 45 SMHIGALRWHFLLQSLEDLRSSLRQLGSCLLVIQGEYESVVRDHVQKWNITQVTLDAEME 104
Query: 65 GV-KPYQSFPTG-SHPPRYQPCK----TLLNFRDL----SGLPPRPKE------------ 102
K ++ G +Q +L N + + G PP +
Sbjct: 105 PFYKEMEANIRGLGEELGFQVLSLMGHSLYNTQRILELNGGTPPLTYKRFLRILSLLGDP 164
Query: 103 DIDFRHVTFGTMSESLQREVSLFQT--VPKPEQFHKYPEMDFGDPLIRWLGGETEALIKL 160
++ R+ T E+ L + VP P PE + W GGE+E L +L
Sbjct: 165 EVPVRNPTAEDFQRCSPPELGLAECYGVPLPTDLKIPPES-----ISPWRGGESEGLQRL 219
Query: 161 NERLSQE--IESFKSGVYLSNQVSPDLTGPPTSQSAALKFGCLSVRRFYWALHDHF-NTI 217
+ L+ + + SF + N + P TG S GCLSVR F++ L + +
Sbjct: 220 EQHLADQGWVASFTKPKTVPNSLLPSTTG----LSPYFSTGCLSVRSFFYRLSNIYAQAK 275
Query: 218 HEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNIPWLPESHPNKEKYLNAW 277
H PP ++ GQL+WRE+FYT+++ P + +M NPICL I W ++ E+ L+ W
Sbjct: 276 HHSLPP--VSLQGQLLWREFFYTVASATPNFTKMAGNPICLQIRWYEDA----ER-LHKW 328
Query: 278 KNGQTGYPFIDAVMRQLRR 296
K QTG+P+IDA+M QLR+
Sbjct: 329 KTAQTGFPWIDAIMTQLRQ 347
Score = 221 (82.9 bits), Expect = 1.0e-47, Sum P(2) = 1.0e-47
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 301 TYCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPER 360
T CPV FGRR DP+G YI++Y+P L+ FP +YIYEPW A Q++A CII +DYP
Sbjct: 408 TRIFCPVRFGRRTDPEGQYIRKYLPILKNFPSKYIYEPWTASEEEQKQAGCIIGRDYPFP 467
Query: 361 IVNHVQASLENKQYLKKEK 379
+V+H +AS N Q +K+ +
Sbjct: 468 MVDHKEASDHNLQLMKQAR 486
Score = 81 (33.6 bits), Expect = 5.1e-33, Sum P(2) = 5.1e-33
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 353 ISKDYPERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQASLENKQNVK 407
I K++P + + + E +Q ++A CII +DYP +V+H +AS N Q +K
Sbjct: 433 ILKNFPSKYIYEPWTASEEEQ----KQAGCIIGRDYPFPMVDHKEASDHNLQLMK 483
>UNIPROTKB|F1P5X2 [details] [associations]
symbol:LOC395100 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
IPI:IPI00821352 Ensembl:ENSGALT00000040673 OMA:WTASEEE
ArrayExpress:F1P5X2 Uniprot:F1P5X2
Length = 547
Score = 305 (112.4 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 96/319 (30%), Positives = 152/319 (47%)
Query: 5 TMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFEQDCE 64
+MHIG R+ FLL+ L DL L+ G L ++QG S+ + ++ N T++ + + E
Sbjct: 63 SMHIGALRWHFLLQSLEDLRSSLRQLGSCLLVIQGEYESVVRDHVQKWNITQVTLDAEME 122
Query: 65 GV-KPYQSFPTG-SHPPRYQPCK----TLLNFRDL----SGLPPRPKE------------ 102
K ++ G +Q +L N + + G PP +
Sbjct: 123 PFYKEMEANIRGLGEELGFQVLSLMGHSLYNTQRILELNGGTPPLTYKRFLRILSLLGDP 182
Query: 103 DIDFRHVTFGTMSESLQREVSLFQT--VPKPEQFHKYPEMDFGDPLIRWLGGETEALIKL 160
++ R+ T E+ L + VP P PE + W GGE+E L +L
Sbjct: 183 EVPVRNPTAEDFQRCSPPELGLAECYGVPLPTDLKIPPES-----ISPWRGGESEGLQRL 237
Query: 161 NERLSQE--IESFKSGVYLSNQVSPDLTGPPTSQSAALKFGCLSVRRFYWALHDHF-NTI 217
+ L+ + + SF + N + P TG S GCLSVR F++ L + +
Sbjct: 238 EQHLADQGWVASFTKPKTVPNSLLPSTTG----LSPYFSTGCLSVRSFFYRLSNIYAQAK 293
Query: 218 HEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNIPWLPESHPNKEKYLNAW 277
H PP ++ GQL+WRE+FYT+++ P + +M NPICL I W ++ E+ L+ W
Sbjct: 294 HHSLPP--VSLQGQLLWREFFYTVASATPNFTKMAGNPICLQIRWYEDA----ER-LHKW 346
Query: 278 KNGQTGYPFIDAVMRQLRR 296
K QTG+P+IDA+M QLR+
Sbjct: 347 KTAQTGFPWIDAIMTQLRQ 365
Score = 221 (82.9 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 301 TYCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPER 360
T CPV FGRR DP+G YI++Y+P L+ FP +YIYEPW A Q++A CII +DYP
Sbjct: 426 TRIFCPVRFGRRTDPEGQYIRKYLPILKNFPSKYIYEPWTASEEEQKQAGCIIGRDYPFP 485
Query: 361 IVNHVQASLENKQYLKKEK 379
+V+H +AS N Q +K+ +
Sbjct: 486 MVDHKEASDHNLQLMKQAR 504
Score = 81 (33.6 bits), Expect = 6.8e-33, Sum P(2) = 6.8e-33
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 353 ISKDYPERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQASLENKQNVK 407
I K++P + + + E +Q ++A CII +DYP +V+H +AS N Q +K
Sbjct: 451 ILKNFPSKYIYEPWTASEEEQ----KQAGCIIGRDYPFPMVDHKEASDHNLQLMK 501
>UNIPROTKB|G4MNA0 [details] [associations]
symbol:MGG_02071 "Cryptochrome-1" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 GO:GO:0006281 EMBL:CM001231 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 RefSeq:XP_003708836.1 EnsemblFungi:MGG_02071T0
GeneID:2681226 KEGG:mgr:MGG_02071 Uniprot:G4MNA0
Length = 679
Score = 144 (55.7 bits), Expect = 1.2e-26, Sum P(4) = 1.2e-26
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 303 CVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCII 353
C P++FG++ DPDG +I+++VPEL +YIYEPWKAP +A ++
Sbjct: 472 CYSPISFGKKWDPDGTFIRKWVPELASLDKKYIYEPWKAPEAELRRAGVVM 522
Score = 136 (52.9 bits), Expect = 1.2e-26, Sum P(4) = 1.2e-26
Identities = 41/138 (29%), Positives = 67/138 (48%)
Query: 139 EMDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQ--SAAL 196
E+ + + GGE+ AL +L+ + ++ + + Q SP P ++ S A+
Sbjct: 228 ELGYPPATTPYKGGESLALRELDAIIENQVYT---ATFRKPQTSPAAFEPQSTTLLSPAM 284
Query: 197 KFGCLSVRRFYWALHDHFNTIHEGR------PPSHFNITGQLIWRE-YFYTMSAHNPYYD 249
FG LSVR FY + D + ++ + PP ++TGQL++R+ YF +A P +
Sbjct: 285 HFGSLSVRLFYHRVQDTVDAYNQAKKKGASLPPE--SLTGQLLFRDMYFAAQAAIGPCFS 342
Query: 250 QMEKNPICLNIPWLPESH 267
Q N C IPW SH
Sbjct: 343 QTAGNAHCRFIPWHLPSH 360
Score = 93 (37.8 bits), Expect = 1.2e-26, Sum P(4) = 1.2e-26
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 9 GYNRFRFLLECLADLDRQLKSHG--GQLFIVQGSPISIFQKLKRELNFTKLCFEQDCE 64
G NR+++LL+C DL + + +LF+++ +P S+F KL + T L FE+D +
Sbjct: 50 GLNRWQYLLDCQNDLSASITNLNPRSKLFVLREAPQSLFPKLFKAWKVTHLVFEKDTD 107
Score = 88 (36.0 bits), Expect = 1.2e-26, Sum P(4) = 1.2e-26
Identities = 15/25 (60%), Positives = 20/25 (80%)
Query: 271 EKYLNAWKNGQTGYPFIDAVMRQLR 295
E + W+ GQTG+P+IDA+MRQLR
Sbjct: 384 ESWFRRWEAGQTGFPWIDALMRQLR 408
>TIGR_CMR|BA_3180 [details] [associations]
symbol:BA_3180 "deoxyribodipyrimidine photolyase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 EMBL:AE016879 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 RefSeq:NP_845490.2
RefSeq:YP_029213.1 ProteinModelPortal:Q81NL2 DNASU:1086563
EnsemblBacteria:EBBACT00000013148 EnsemblBacteria:EBBACT00000022838
GeneID:1086563 GeneID:2852147 KEGG:ban:BA_3180 KEGG:bat:BAS2956
PATRIC:18783980 ProtClustDB:CLSK584502
BioCyc:BANT260799:GJAJ-3018-MONOMER Uniprot:Q81NL2
Length = 476
Score = 157 (60.3 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 73/299 (24%), Positives = 120/299 (40%)
Query: 15 FLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFT----KLCFEQDCEGVKPYQ 70
+L + D+ +QL++ G L I +GS L +L T +C++ D ++ Q
Sbjct: 49 WLHHAIIDVKKQLEALGSTLIIRKGSTQEEILSLVEQLGITAVYWNICYDPD--RLQSNQ 106
Query: 71 SFPTG-SHPPRYQPCKTLLNFRDLSGLPPRPKEDIDFRHVT-F--GTMSESLQREVSLFQ 126
H + CK + L + K++ +++ T F + + + +S Q
Sbjct: 107 KMKMMLEH--KGMICKEFNSHLLLEPWVIKKKDNTEYKVFTPFYNAFQKQVIHKPISKVQ 164
Query: 127 TV------P---KPEQFHKYPEMDFGDPLIR-WLGGETEALIKLNERLSQEIESFKSGVY 176
++ P + H P + + + W E A E S ++ S+ G
Sbjct: 165 SIKGGNSLPVSLSVSELHLLPTIPWTSHMESIWEPTEEGAYKTWKEFFSSKLASYSEGRD 224
Query: 177 LSNQVSPDLTGPPTSQSAALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFN-ITGQLIWR 235
NQ + + P L FG +SV+ Y L + N QLIWR
Sbjct: 225 FPNQNAHSMLAP------YLSFGQISVKLIYHYLINKSTESQCSLFEKQVNSFIRQLIWR 278
Query: 236 EYFYTMSAHNPYYDQMEKNPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQL 294
E+ Y + H P+ N + PW N+E+ L W+ G TGYPFIDA MR+L
Sbjct: 279 EFSYYLLYHYPFTAYKPLNKSFEHFPW-----NNEEELLRVWQKGDTGYPFIDAGMREL 332
Score = 147 (56.8 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 306 PVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERIVNHV 365
P+ G + D +G YI+++VPEL+ P +YI++PW+AP + +KAN + YP +V+H
Sbjct: 400 PITQGEKFDKNGEYIRKWVPELKDMPNKYIHKPWEAPEHILQKANIQLGHTYPLPVVDHK 459
Query: 366 QA 367
A
Sbjct: 460 AA 461
Score = 43 (20.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 355 KDYPERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQA 398
KD P + ++ E +++ +KAN + YP +V+H A
Sbjct: 422 KDMPNK---YIHKPWEAPEHIL-QKANIQLGHTYPLPVVDHKAA 461
>TIGR_CMR|CBU_1176 [details] [associations]
symbol:CBU_1176 "deoxyribodipyrimidine photolyase - class
I" species:227377 "Coxiella burnetii RSA 493" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669
GO:GO:0003904 RefSeq:NP_820171.1 HSSP:P00914
ProteinModelPortal:Q83CE4 GeneID:1209079 KEGG:cbu:CBU_1176
PATRIC:17931093 ProtClustDB:CLSK2394345
BioCyc:CBUR227377:GJ7S-1162-MONOMER Uniprot:Q83CE4
Length = 472
Score = 148 (57.2 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 49/161 (30%), Positives = 78/161 (48%)
Query: 136 KYPEMDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQ-SA 194
K+P D+ +W GE A I L + + + +++ Y +++ PD++ TS S
Sbjct: 184 KHP--DWSQGFDQWKPGEKNAQIVLKKFIKENLKN-----YPAHRDRPDISS--TSHLSP 234
Query: 195 ALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNI-TGQLIWREYFYTMSAHNPYYDQMEK 253
L FG +S+R+ + A+ TI + ++ QLIWRE+ Y + H P +
Sbjct: 235 YLHFGEISIRQVWTAITQA--TIQDKNLQKAADVFLRQLIWREFAYYLLWHFPQMGRSNF 292
Query: 254 NPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQL 294
N W NK +L AW+ G TGYP +DA MR+L
Sbjct: 293 RNQFDNFKW----KKNKN-WLRAWQKGLTGYPIVDAGMREL 328
Score = 141 (54.7 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 306 PVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERIVNHV 365
P+ ++ DPDG YIKR++PEL + P +YI+ P P + E + + DYP IVNH
Sbjct: 396 PILQSKKFDPDGTYIKRWIPELAKVPSKYIHYPADMPDNISESSKVNLGVDYPFPIVNHH 455
Query: 366 QAS-LENKQY 374
+A L K Y
Sbjct: 456 KAKELALKAY 465
Score = 42 (19.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 358 PERIVNHVQASLENKQYLKKEKANCIINKDYPERIVNHVQA 398
P + + H A + + + K N + DYP IVNH +A
Sbjct: 421 PSKYI-HYPADMPDN-ISESSKVN--LGVDYPFPIVNHHKA 457
>UNIPROTKB|Q7T3R1 [details] [associations]
symbol:LOC395100 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 GO:GO:0006281 GO:GO:0003913 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 HSSP:P00914 EMBL:AADN02063941
UniGene:Gga.5544 EMBL:AY102068 IPI:IPI00821473
Ensembl:ENSGALT00000040670 HOGENOM:HOG000202408 InParanoid:Q7T3R1
Uniprot:Q7T3R1
Length = 140
Score = 152 (58.6 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 301 TYCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKA 349
T CPV FGRR DP+G YI++Y+P L+ FP +YIYEPW A Q++A
Sbjct: 92 TRIFCPVRFGRRTDPEGQYIRKYLPILKNFPSKYIYEPWTASEEEQKQA 140
Score = 83 (34.3 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 274 LNAWKNGQTGYPFIDAVMRQLRR 296
L+ WK QTG+P+IDA+M QLR+
Sbjct: 9 LHKWKTAQTGFPWIDAIMTQLRQ 31
>ZFIN|ZDB-GENE-040617-2 [details] [associations]
symbol:cry-dash "cryptochrome DASH" species:7955
"Danio rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IDA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IDA] [GO:0000719 "photoreactive repair"
evidence=IDA] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 ZFIN:ZDB-GENE-040617-2 GO:GO:0050660 GO:GO:0003684
GO:GO:0000719 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0003904
InterPro:IPR014133 TIGRFAMs:TIGR02765 EMBL:BX247944 IPI:IPI00495554
Ensembl:ENSDART00000139329 ArrayExpress:F1R5N7 Bgee:F1R5N7
Uniprot:F1R5N7
Length = 521
Score = 166 (63.5 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 76/321 (23%), Positives = 139/321 (43%)
Query: 2 FPGTMHIGYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKREL-NFTKLCFE 60
FP T G R RFLL+ + DL LK HG L + QG P + +L ++L + + + F
Sbjct: 53 FPKT---GPFRLRFLLDSVKDLRALLKKHGSTLLVRQGKPEDVVCELIKQLGSVSTVAFH 109
Query: 61 QDCEGVKPYQSFPTGSHPPRYQPCKTLLNFRDLSGLPPRPKEDIDFRHV-----TFGTMS 115
++ + + + C+ + + G ++D+ F H+ +
Sbjct: 110 EEVASEEK-----SVEEKLKEICCQNKVRVQTFWGSTLYHRDDLPFSHIGGLPDVYTQFR 164
Query: 116 ESLQREVSLFQTVPKPEQFHKYPE-MDFG-----------DPL------IRWLGGETEAL 157
++++ + + + PEQ P ++ G +PL GGETEAL
Sbjct: 165 KAVEAQGRVRPVLSTPEQVKSPPSGLEEGPIPTFDSLGQTEPLDDCRSAFPCRGGETEAL 224
Query: 158 IKLNERL--SQEIESFKSGVYLSNQVSPDLTGPPTSQSAALKFGCLSVRRFYWALHDHFN 215
+L + + ++K + + D + T S L GC+S R Y + +
Sbjct: 225 ARLKHYFWDTNAVATYKET--RNGMIGVDFS---TKFSPWLALGCISPRYIYEQIKKY-- 277
Query: 216 TIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQM-EKNPIC-LNIPWLPESHPNKEKY 273
+ S + + +L+WR+YF ++ Y +++ N + ++PW + K
Sbjct: 278 EVERTANQSTYWVIFELLWRDYFKFVALK--YGNRIFYMNGLQDKHVPWNTDM-----KM 330
Query: 274 LNAWKNGQTGYPFIDAVMRQL 294
+AWK G+TG PF+DA MR+L
Sbjct: 331 FDAWKEGRTGVPFVDANMREL 351
Score = 69 (29.3 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 310 GRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERIV 362
G D +G Y++++VPELR ++ PW A +++ YP I+
Sbjct: 422 GLDYDNNGDYVRQWVPELRGIKGGDVHTPWTLSNSALSHAQVSLNQTYPCPII 474
>UNIPROTKB|Q9KNA8 [details] [associations]
symbol:phrA "Deoxyribodipyrimidine photo-lyase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 PROSITE:PS00691
InterPro:IPR006050 Pfam:PF00875 GO:GO:0003677 GO:GO:0006281
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 OMA:CKVDFWL
KO:K01669 GO:GO:0003904 PIR:G82505 RefSeq:NP_232458.1
ProteinModelPortal:Q9KNA8 DNASU:2612142 GeneID:2612142
KEGG:vch:VCA0057 PATRIC:20084701 ProtClustDB:CLSK869480
Uniprot:Q9KNA8
Length = 469
Score = 122 (48.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 306 PVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERIVNHV 365
PV+ G + DP+G +I+R+VPELR YI++PW P N ++ YP R+V+H
Sbjct: 403 PVSQGEKFDPNGDFIRRWVPELRSVSSAYIHQPWTYPA-----VNSVL---YPARLVDHK 454
Query: 366 Q 366
Q
Sbjct: 455 Q 455
Score = 112 (44.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 46/174 (26%), Positives = 77/174 (44%)
Query: 123 SLFQTVPKPEQFHKYPEMDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGVYLSNQVS 182
+L + V PEQ YP +D P W +L + + ++ + +
Sbjct: 180 ALAELVWHPEQAFDYPRID-STP---WAADFETVRAQLRDFCRERVQDYHQA-----RDF 230
Query: 183 PDLTGPPTSQSAALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMS 242
P G +S S L G LS R+ L+ H +++ E + ++ +LIWRE++ +
Sbjct: 231 PAREGT-SSLSPYLAIGVLSARQCVARLY-HESSMGELSEGAQVWLS-ELIWREFYQHLV 287
Query: 243 AHNPYYDQMEKNPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
A P + K+ + E + EK+ W G+TGYP +DA MRQL +
Sbjct: 288 AIEP---NLSKSRDFVEWGARLEWWNDNEKF-QLWCEGKTGYPIVDAAMRQLNQ 337
>TIGR_CMR|VC_A0057 [details] [associations]
symbol:VC_A0057 "deoxyribodipyrimidine photolyase,
cyclobutane pyrimidine dimer-specific" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 PROSITE:PS00691
InterPro:IPR006050 Pfam:PF00875 GO:GO:0003677 GO:GO:0006281
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 OMA:CKVDFWL
KO:K01669 GO:GO:0003904 PIR:G82505 RefSeq:NP_232458.1
ProteinModelPortal:Q9KNA8 DNASU:2612142 GeneID:2612142
KEGG:vch:VCA0057 PATRIC:20084701 ProtClustDB:CLSK869480
Uniprot:Q9KNA8
Length = 469
Score = 122 (48.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 306 PVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERIVNHV 365
PV+ G + DP+G +I+R+VPELR YI++PW P N ++ YP R+V+H
Sbjct: 403 PVSQGEKFDPNGDFIRRWVPELRSVSSAYIHQPWTYPA-----VNSVL---YPARLVDHK 454
Query: 366 Q 366
Q
Sbjct: 455 Q 455
Score = 112 (44.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 46/174 (26%), Positives = 77/174 (44%)
Query: 123 SLFQTVPKPEQFHKYPEMDFGDPLIRWLGGETEALIKLNERLSQEIESFKSGVYLSNQVS 182
+L + V PEQ YP +D P W +L + + ++ + +
Sbjct: 180 ALAELVWHPEQAFDYPRID-STP---WAADFETVRAQLRDFCRERVQDYHQA-----RDF 230
Query: 183 PDLTGPPTSQSAALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMS 242
P G +S S L G LS R+ L+ H +++ E + ++ +LIWRE++ +
Sbjct: 231 PAREGT-SSLSPYLAIGVLSARQCVARLY-HESSMGELSEGAQVWLS-ELIWREFYQHLV 287
Query: 243 AHNPYYDQMEKNPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
A P + K+ + E + EK+ W G+TGYP +DA MRQL +
Sbjct: 288 AIEP---NLSKSRDFVEWGARLEWWNDNEKF-QLWCEGKTGYPIVDAAMRQLNQ 337
>UNIPROTKB|P00914 [details] [associations]
symbol:phr "deoxyribodipyrimidine photolyase
(photoreactivation)" species:83333 "Escherichia coli K-12"
[GO:0018298 "protein-chromophore linkage" evidence=IEA;IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003904 "deoxyribodipyrimidine
photo-lyase activity" evidence=IEA;IDA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 EMBL:K01299 InterPro:IPR006050 Pfam:PF00875
GO:GO:0000166 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003677 GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669 GO:GO:0003904
EMBL:X57399 PIR:A01137 RefSeq:NP_415236.1 RefSeq:YP_488988.1
PDB:1DNP PDBsum:1DNP ProteinModelPortal:P00914 SMR:P00914
DIP:DIP-10505N IntAct:P00914 MINT:MINT-1302006 PRIDE:P00914
EnsemblBacteria:EBESCT00000003526 EnsemblBacteria:EBESCT00000003527
EnsemblBacteria:EBESCT00000016976 GeneID:12930926 GeneID:947005
KEGG:ecj:Y75_p0688 KEGG:eco:b0708 PATRIC:32116611 EchoBASE:EB0729
EcoGene:EG10736 ProtClustDB:PRK10674 BioCyc:EcoCyc:EG10736-MONOMER
BioCyc:ECOL316407:JW0698-MONOMER BioCyc:MetaCyc:EG10736-MONOMER
SABIO-RK:P00914 EvolutionaryTrace:P00914 Genevestigator:P00914
Uniprot:P00914
Length = 472
Score = 119 (46.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 40/127 (31%), Positives = 63/127 (49%)
Query: 173 SGVYLSNQVSPDLTGPPTSQ-SAALKFGCLSVRR-FYWALHDHFNTIHEGRPPSHFNITG 230
+G Y + P + G TS+ SA+L G LS R+ + L + + G N
Sbjct: 220 AGEYEQQRDFPAVEG--TSRLSASLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLN--- 274
Query: 231 QLIWREYFYTMSAHNPYYDQMEKNPICL---NIPWLPESHPNKEKYLNAWKNGQTGYPFI 287
+LIWRE++ + ++P + P + W +S+P +L AW+ G+TGYP +
Sbjct: 275 ELIWREFYRHLITYHP--SLCKHRPFIAWTDRVQW--QSNP---AHLQAWQEGKTGYPIV 327
Query: 288 DAVMRQL 294
DA MRQL
Sbjct: 328 DAAMRQL 334
Score = 115 (45.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 306 PVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERIVNHV 365
P G + D +G +I++++PELR P + ++EPWK +KA ++ DYP+ IV H
Sbjct: 402 PTTQGEKFDHEGEFIRQWLPELRDVPGKVVHEPWKWA----QKAG--VTLDYPQPIVEHK 455
Query: 366 QASLE 370
+A ++
Sbjct: 456 EARVQ 460
Score = 43 (20.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 384 INKDYPERIVNHVQASLE 401
+ DYP+ IV H +A ++
Sbjct: 443 VTLDYPQPIVEHKEARVQ 460
>TIGR_CMR|SO_3384 [details] [associations]
symbol:SO_3384 "deoxyribodipyrimidine photolyase"
species:211586 "Shewanella oneidensis MR-1" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 GO:GO:0003904
HSSP:P00914 RefSeq:NP_718938.1 ProteinModelPortal:Q8EBW1
GeneID:1171062 KEGG:son:SO_3384 PATRIC:23526448 OMA:WISELAW
ProtClustDB:CLSK907140 Uniprot:Q8EBW1
Length = 512
Score = 137 (53.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 47/158 (29%), Positives = 75/158 (47%)
Query: 144 DPLI---RWLGGETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQSAALKFGC 200
+PLI +W GE +A LN+ + Q+++ +K ++ P + G S L G
Sbjct: 225 NPLISSEQWAAGEGQAKRLLNQFIQQKVQDYKQ-----DRDFPAIDGTSVI-SPYLAIGV 278
Query: 201 LSVRRFYWALHDHF-NTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEK-NPICL 258
LS R+ AL F I + P + +LIWRE++ + P + N
Sbjct: 279 LSPRQCVAALLQRFPEVIVDDTSPGRTWLN-ELIWREFYRHLLVAFPDLSKGNNFNRQAD 337
Query: 259 NIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
++ W N+ ++L AW G+TGYP +DA MRQL +
Sbjct: 338 HVLW----RNNQSEFL-AWCEGKTGYPIVDAAMRQLNQ 370
Score = 96 (38.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 306 PVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISK-DYPERIVNH 364
P++ + DPDG +I++Y+PEL + + +++P + + +A S+ DYP IV H
Sbjct: 436 PMSQSEKFDPDGRFIRKYLPELASWGVTRLHQPNQQKMPSLFEAPLFASQADYPNAIVEH 495
>TAIR|locus:2138728 [details] [associations]
symbol:CRY1 "cryptochrome 1" species:3702 "Arabidopsis
thaliana" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=NAS]
[GO:0009637 "response to blue light" evidence=RCA;IMP;NAS]
[GO:0009785 "blue light signaling pathway" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0051510 "regulation of
unidimensional cell growth" evidence=IMP] [GO:0004672 "protein
kinase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0046777 "protein autophosphorylation"
evidence=RCA;IDA] [GO:0055114 "oxidation-reduction process"
evidence=IMP] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0010118 "stomatal movement" evidence=IGI] [GO:0010343 "singlet
oxygen-mediated programmed cell death" evidence=IMP] [GO:0046283
"anthocyanin-containing compound metabolic process" evidence=IMP]
[GO:0010617 "circadian regulation of calcium ion oscillation"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010075
"regulation of meristem growth" evidence=IGI] [GO:0009583
"detection of light stimulus" evidence=IMP] [GO:0010155 "regulation
of proton transport" evidence=RCA] [GO:0009882 "blue light
photoreceptor activity" evidence=IMP] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009414 GO:GO:0006281 GO:GO:0046777
GO:GO:0009640 GO:GO:0010118 GO:GO:0004672 GO:GO:0018298
GO:GO:0055114 EMBL:AL161513 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:AF128396 GO:GO:0010075 GO:GO:0046283 GO:GO:0051510
eggNOG:COG0415 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 EMBL:S66907 EMBL:S66909
EMBL:AF361588 EMBL:AY124863 IPI:IPI00529765 PIR:H85089 PIR:S39058
RefSeq:NP_567341.1 UniGene:At.27730 PDB:1U3C PDB:1U3D PDBsum:1U3C
PDBsum:1U3D DisProt:DP00474 ProteinModelPortal:Q43125 SMR:Q43125
IntAct:Q43125 MINT:MINT-192438 STRING:Q43125 PaxDb:Q43125
PRIDE:Q43125 EnsemblPlants:AT4G08920.1 GeneID:826470
KEGG:ath:AT4G08920 TAIR:At4g08920 HOGENOM:HOG000245621
InParanoid:Q43125 KO:K12118 OMA:CKVDFWL ProtClustDB:CLSN2681786
EvolutionaryTrace:Q43125 Genevestigator:Q43125 GermOnline:AT4G08920
GO:GO:0010617 GO:GO:0009583 GO:GO:0010343 InterPro:IPR020978
InterPro:IPR014134 Pfam:PF12546 TIGRFAMs:TIGR02766 Uniprot:Q43125
Length = 681
Score = 122 (48.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 310 GRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERIV 362
G + DP+G Y++R++PEL + P +I+ PW AP V + A + +YP IV
Sbjct: 423 GYKFDPNGEYVRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIV 475
Score = 107 (42.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 35/123 (28%), Positives = 58/123 (47%)
Query: 176 YLSNQVSPDLTGPPTSQSAALKFGCLSVRR-FYWALHDHFNTIHEGRPPSHFNIT---GQ 231
Y N+ D + + S L FG +SVR+ F+ +EG ++
Sbjct: 235 YSKNRRKAD-SATTSFLSPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKS 293
Query: 232 LIWREYFYTMSAHNPYYDQMEKNPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVM 291
+ REY +S ++PY + P+ ++ + P + E Y AW+ G+TGYP +DA M
Sbjct: 294 IGLREYSRYISFNHPY---SHERPLLGHLKFFPWAVD--ENYFKAWRQGRTGYPLVDAGM 348
Query: 292 RQL 294
R+L
Sbjct: 349 REL 351
>ZFIN|ZDB-GENE-120215-243 [details] [associations]
symbol:si:ch73-25i22.2 "si:ch73-25i22.2"
species:7955 "Danio rerio" [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
ZFIN:ZDB-GENE-120215-243 GO:GO:0006281 GO:GO:0003913
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 EMBL:CU929153
Ensembl:ENSDART00000151373 Uniprot:I3ITK7
Length = 316
Score = 129 (50.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 287 IDAVMRQLRRL--LD-CTYCVCPVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPL 343
IDA+M Q + LD + + P++ DP G +++++ PEL+ P I++PWK P
Sbjct: 75 IDAMMWQNGGMCGLDHWNFVMHPIDAALTCDPCGTFVRQWCPELKALPDDLIHKPWKCPT 134
Query: 344 GVQEKANCIISKDYPERIV 362
+ +A + YPERIV
Sbjct: 135 SMLRRAGVVFGDSYPERIV 153
Score = 86 (35.3 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 14/22 (63%), Positives = 18/22 (81%)
Query: 273 YLNAWKNGQTGYPFIDAVMRQL 294
+L AW+ G+TGYP +DA MRQL
Sbjct: 10 HLKAWQRGRTGYPLVDAAMRQL 31
>ASPGD|ASPL0000053661 [details] [associations]
symbol:cryA species:162425 "Emericella nidulans"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0000719
"photoreactive repair" evidence=IGI] [GO:0070797 "negative
regulation of cleistothecium development" evidence=IMP] [GO:0071483
"cellular response to blue light" evidence=IMP] [GO:0071492
"cellular response to UV-A" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0070791 "cleistothecium
development" evidence=IMP] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875 EMBL:BN001308
GO:GO:0006281 EMBL:AACD01000007 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 OrthoDB:EOG4XPTQ3
RefSeq:XP_657991.1 ProteinModelPortal:Q5BGE3 STRING:Q5BGE3
EnsemblFungi:CADANIAT00002312 GeneID:2876167 KEGG:ani:AN0387.2
OMA:HMAPRQA Uniprot:Q5BGE3
Length = 567
Score = 112 (44.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 46/175 (26%), Positives = 80/175 (45%)
Query: 124 LFQT-VPKPEQFHKYPEMDFGDPLIR-WLGGETEALIKLNERLSQEIESFKSGVYLSNQV 181
LF+ VP + ++ +++ D + R + GE E L +L E L + +LS +
Sbjct: 267 LFECPVPATPENKRFDDVEKADRVRRAFPAGEHEGLRRLEEFLEKATAYDDERNFLSGET 326
Query: 182 SPDLTGPPTSQSAALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTM 241
+ L+ P S +L +V + A + I G + + ++ WR+++ +
Sbjct: 327 TSKLS--PYFASGSLS-ARTAVAK---AREANAGKISRGEA-GYISWISEVAWRDFYKHV 379
Query: 242 SAHNPYY--DQMEKNPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQL 294
H P+ ++ K NI W S+ N + AW G+TGYP +DA MRQL
Sbjct: 380 LVHWPFICMNKCFKFEFT-NIDW---SYNNT--HFEAWAAGKTGYPLVDAAMRQL 428
Score = 105 (42.0 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 306 PVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERIVNHV 365
P+ R DPDG +I+R+VPELR I+ P++ G +AN YPE IV+H
Sbjct: 496 PIRQSERFDPDGEFIRRWVPELRGVEGNAIHAPYERGAGDIARAN-----GYPEPIVDHA 550
Query: 366 -QASLENKQY 374
Q + ++Y
Sbjct: 551 RQRGVALRKY 560
>TAIR|locus:2018254 [details] [associations]
symbol:CRY2 "cryptochrome 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009882 "blue light photoreceptor activity" evidence=ISS]
[GO:0005773 "vacuole" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=IGI] [GO:0010118 "stomatal movement" evidence=IGI]
[GO:0009909 "regulation of flower development" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] [GO:0006338 "chromatin remodeling" evidence=IMP]
[GO:0010617 "circadian regulation of calcium ion oscillation"
evidence=IMP] [GO:0010075 "regulation of meristem growth"
evidence=IGI] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0009416 "response to light stimulus" evidence=IEP] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0009638 "phototropism"
evidence=IGI] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0005773
GO:GO:0009414 GO:GO:0006281 GO:GO:0010118 GO:GO:0006338
EMBL:AC000104 GO:GO:0018298 GO:GO:0009911 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0010075 eggNOG:COG0415 GO:GO:0009882
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
ProtClustDB:CLSN2681786 GO:GO:0010617 InterPro:IPR014134
TIGRFAMs:TIGR02766 EMBL:U62549 EMBL:U62550 EMBL:X99061 EMBL:U43397
EMBL:AY057440 EMBL:AY057441 EMBL:AY057442 EMBL:EU351967
EMBL:EU351968 EMBL:EU351969 EMBL:EU351970 EMBL:EU351971
EMBL:EU351972 EMBL:EU351973 EMBL:EU351974 EMBL:EU351975
EMBL:EU351976 EMBL:EU351977 EMBL:EU351978 EMBL:EU351979
EMBL:EU351980 EMBL:EU351981 EMBL:EU351982 EMBL:EU351983
EMBL:EU351984 EMBL:EU351985 EMBL:EU351986 EMBL:EU351987
EMBL:EU351988 EMBL:EU351989 EMBL:EU351990 EMBL:EU351991
EMBL:EU351993 EMBL:EU351992 EMBL:EU351994 EMBL:EU351995
EMBL:EU351996 EMBL:EU351997 EMBL:EU351998 EMBL:BT008576
EMBL:BT008648 EMBL:AY576241 EMBL:AY576242 EMBL:AY576243
EMBL:AY576244 EMBL:AY576245 EMBL:AY576246 EMBL:AY576247
EMBL:AY576248 EMBL:AY576249 EMBL:AY576250 EMBL:AY576251
EMBL:AY576252 EMBL:AY576253 EMBL:AY576254 EMBL:AY576255
EMBL:AY576256 EMBL:AY576257 EMBL:AY576258 EMBL:AY576259
EMBL:AY576260 EMBL:AY576261 EMBL:AY576262 EMBL:AY576263
EMBL:AY576264 EMBL:AY576265 EMBL:AY576266 EMBL:AY576267
EMBL:AY576268 EMBL:AY576269 EMBL:AY576270 EMBL:AY576271
EMBL:AK220946 IPI:IPI00528436 PIR:A86176 PIR:S71221
RefSeq:NP_171935.1 RefSeq:NP_849588.1 UniGene:At.21976
ProteinModelPortal:Q96524 SMR:Q96524 DIP:DIP-33589N IntAct:Q96524
MINT:MINT-207946 STRING:Q96524 PaxDb:Q96524 PRIDE:Q96524
EnsemblPlants:AT1G04400.1 EnsemblPlants:AT1G04400.2 GeneID:839529
KEGG:ath:AT1G04400 TAIR:At1g04400 InParanoid:Q96524 KO:K12119
OMA:GDLANNQ PhylomeDB:Q96524 Genevestigator:Q96524
GermOnline:AT1G04400 GO:GO:0009638 Uniprot:Q96524
Length = 612
Score = 122 (48.0 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 29/89 (32%), Positives = 49/89 (55%)
Query: 306 PVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERIVNHV 365
P G + DP+G YI++++PEL + P ++I+ PW APL V + + + +Y + IV+
Sbjct: 416 PALQGAKYDPEGEYIRQWLPELARLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVDID 475
Query: 366 QA-SLENKQYLKKEKANCIINKDYPERIV 393
A L K + +A +I P+ IV
Sbjct: 476 TARELLAKAISRTREAQIMIGAA-PDEIV 503
Score = 91 (37.1 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 41/151 (27%), Positives = 66/151 (43%)
Query: 149 WLGGETEALIKLNERLSQEIESF--KSGVYLSNQVSPDLTGPPT---SQSAALKFGCLSV 203
W G + A LNE + +++ + S + N S L P S F C +
Sbjct: 210 WSPGWSNADKLLNEFIEKQLIDYAKNSKKVVGNSTS--LLSPYLHFGEISVRHVFQCARM 267
Query: 204 RRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNIPWL 263
++ WA D N+ EG + + G + REY + + P+ + PW
Sbjct: 268 KQIIWA-RDK-NS--EGEESADLFLRG-IGLREYSRYICFNFPFTHEQSLLSHLRFFPW- 321
Query: 264 PESHPNKEKYLNAWKNGQTGYPFIDAVMRQL 294
++ +K K AW+ G+TGYP +DA MR+L
Sbjct: 322 -DADVDKFK---AWRQGRTGYPLVDAGMREL 348
>UNIPROTKB|Q9KR33 [details] [associations]
symbol:cry1 "Cryptochrome DASH" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006355 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006351
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 PIR:B82155
RefSeq:NP_231448.1 ProteinModelPortal:Q9KR33 DNASU:2613694
GeneID:2613694 KEGG:vch:VC1814 PATRIC:20082676 KO:K01669
OMA:YWLIFEL ProtClustDB:CLSK874544 GO:GO:0003904 InterPro:IPR014133
TIGRFAMs:TIGR02765 Uniprot:Q9KR33
Length = 461
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 77/298 (25%), Positives = 129/298 (43%)
Query: 9 GYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFE-----QDC 63
G + RFL + LADLD L + G +L++ P + L ++ T + + +
Sbjct: 55 GEAKKRFLNQTLADLDHSLSTLGQKLWVTPLLPYQALRHLLTQVEITDIYVDAVAGSDER 114
Query: 64 EGV-KPYQSFPTGSHPPRYQPCKTLLNFRDLS-GLPPRPKEDIDFRHVTFGTMSESLQRE 121
+ + + +Q F + H + Q +LL+ L L P FR T+S L
Sbjct: 115 QAIARIHQDF-SSVHIHQ-QALHSLLSEPQLPFALEALPSTFTQFRKQV-ETIS--LSAP 169
Query: 122 VSLFQTVPKPEQFHKYPEMDF-GDPL-IRWLGGETEALIKLNERLSQEIESFKSGVYLSN 179
+ +P EQ + P MD +P ++GGE L S + S Y
Sbjct: 170 MGYPHVLPPIEQGWQLPLMDIVTEPNHSAFVGGEQAGLTHCQNYFSSLLPSR----YKET 225
Query: 180 QVSPDLTGPPTSQSAALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFY 239
+ D T S L G +S + Y A+ + +H G S + I +L+WREYFY
Sbjct: 226 RNGLDGMDYSTKFSPWLALGAVSPKTIY-AMLQRYEAVH-GANDSTYWIFFELLWREYFY 283
Query: 240 TMSAHNPYYDQMEK-NPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
+ Y ++ + + I P L + +++L WK+G+T +P ++A MRQL +
Sbjct: 284 WYARR--YGAKLFRFSGIGEKKP-LTSFYA--QRFLQ-WKHGETPFPIVNACMRQLNQ 335
>TIGR_CMR|VC_1814 [details] [associations]
symbol:VC_1814 "RNA-binding cryptochrome Cry1" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006355 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006351
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 PIR:B82155
RefSeq:NP_231448.1 ProteinModelPortal:Q9KR33 DNASU:2613694
GeneID:2613694 KEGG:vch:VC1814 PATRIC:20082676 KO:K01669
OMA:YWLIFEL ProtClustDB:CLSK874544 GO:GO:0003904 InterPro:IPR014133
TIGRFAMs:TIGR02765 Uniprot:Q9KR33
Length = 461
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 77/298 (25%), Positives = 129/298 (43%)
Query: 9 GYNRFRFLLECLADLDRQLKSHGGQLFIVQGSPISIFQKLKRELNFTKLCFE-----QDC 63
G + RFL + LADLD L + G +L++ P + L ++ T + + +
Sbjct: 55 GEAKKRFLNQTLADLDHSLSTLGQKLWVTPLLPYQALRHLLTQVEITDIYVDAVAGSDER 114
Query: 64 EGV-KPYQSFPTGSHPPRYQPCKTLLNFRDLS-GLPPRPKEDIDFRHVTFGTMSESLQRE 121
+ + + +Q F + H + Q +LL+ L L P FR T+S L
Sbjct: 115 QAIARIHQDF-SSVHIHQ-QALHSLLSEPQLPFALEALPSTFTQFRKQV-ETIS--LSAP 169
Query: 122 VSLFQTVPKPEQFHKYPEMDF-GDPL-IRWLGGETEALIKLNERLSQEIESFKSGVYLSN 179
+ +P EQ + P MD +P ++GGE L S + S Y
Sbjct: 170 MGYPHVLPPIEQGWQLPLMDIVTEPNHSAFVGGEQAGLTHCQNYFSSLLPSR----YKET 225
Query: 180 QVSPDLTGPPTSQSAALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQLIWREYFY 239
+ D T S L G +S + Y A+ + +H G S + I +L+WREYFY
Sbjct: 226 RNGLDGMDYSTKFSPWLALGAVSPKTIY-AMLQRYEAVH-GANDSTYWIFFELLWREYFY 283
Query: 240 TMSAHNPYYDQMEK-NPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVMRQLRR 296
+ Y ++ + + I P L + +++L WK+G+T +P ++A MRQL +
Sbjct: 284 WYARR--YGAKLFRFSGIGEKKP-LTSFYA--QRFLQ-WKHGETPFPIVNACMRQLNQ 335
>UNIPROTKB|Q48MU1 [details] [associations]
symbol:phrB "Deoxyribodipyrimidine photolyase"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0006281 GO:GO:0018298 EMBL:CP000058
GenomeReviews:CP000058_GR Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 SUPFAM:SSF52425 SUPFAM:SSF48173 HOGENOM:HOG000245621
OMA:CKVDFWL KO:K01669 GO:GO:0003904 RefSeq:YP_273281.1
ProteinModelPortal:Q48MU1 STRING:Q48MU1 GeneID:3555718
KEGG:psp:PSPPH_1010 PATRIC:19971112 ProtClustDB:CLSK868818
Uniprot:Q48MU1
Length = 482
Score = 97 (39.2 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 43/149 (28%), Positives = 65/149 (43%)
Query: 149 WLGGETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQ-SAALKFGCLSVRR-F 206
W GE EA ++ +I +K+ + P P TSQ SA L G +S R+
Sbjct: 202 WPAGEAEARRRMATFADAQISYYKT-----ERDFP--AKPGTSQLSAYLAAGVISPRQCL 254
Query: 207 YWALHDHFNTIHEGRPPSHFNITGQLIWREYF-YTMSAHNPYYDQMEKNPICLNIPWLPE 265
+ AL + G + I +L+WRE++ +T+ + P + W
Sbjct: 255 HAALGSNQGEFETGDVGTVTWIN-ELLWREFYKHTLVGYPRVSRHRAFRPETEALKW--R 311
Query: 266 SHPNKEKYLNAWKNGQTGYPFIDAVMRQL 294
P + L AW+ +TG P IDA MRQL
Sbjct: 312 DAPEE---LLAWQEARTGLPIIDAAMRQL 337
Score = 86 (35.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 306 PVNFGRRLDPDGIYIKRYVPELRQFPIQYIYEPWKAPLGVQEKANCIISKDYPERIVN 363
P++ R DP+G++IKR++PEL + I++P A +G + DYP+ IV+
Sbjct: 405 PLSQSERFDPEGVFIKRWLPELADLNKKQIHDP--ASIG-----GLFGAADYPKPIVD 455
>TIGR_CMR|CPS_1380 [details] [associations]
symbol:CPS_1380 "deoxyribodipyrimidine photolyase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:GDLANNQ
KO:K01669 GO:GO:0003904 RefSeq:YP_268123.1
ProteinModelPortal:Q485Z2 STRING:Q485Z2 GeneID:3520518
KEGG:cps:CPS_1380 PATRIC:21465975 ProtClustDB:CLSK715243
BioCyc:CPSY167879:GI48-1461-MONOMER Uniprot:Q485Z2
Length = 470
Score = 106 (42.4 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 33/125 (26%), Positives = 52/125 (41%)
Query: 172 KSGVYLSNQVSPDLTGPPTSQSAALKFGCLSVRRFYWALHDHFNTIHEGRPPSHFNITGQ 231
K Y N+ P + G + S L G +S R L + + F+ +
Sbjct: 221 KISTYKLNRDIPSIKGT-SGISPYLAAGVISPRFVLRLLLNKHPDLLVASDSEEFSWLNE 279
Query: 232 LIWREYFYTMSAHNPYYDQMEKNPICLNIPWLPESHPNKEKYLNAWKNGQTGYPFIDAVM 291
+IWRE++ H +++Q C + N +AW G+TGYP +DA M
Sbjct: 280 IIWREFY----RHLLFHEQRLCKHQCYKENYQEMLWHNDAALFDAWCQGRTGYPLVDAAM 335
Query: 292 RQLRR 296
RQL +
Sbjct: 336 RQLNQ 340
Score = 75 (31.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 306 PVNFGRRLDPDGIYIKRYVPELRQ-------FPIQYI 335
P+ R DP G++I++Y+PEL FP QYI
Sbjct: 406 PIRQSERFDPKGVFIRKYIPELNNISDKAIHFPHQYI 442
>TIGR_CMR|SPO_1917 [details] [associations]
symbol:SPO_1917 "deoxyribodipyrimidine photolyase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669
GO:GO:0003904 RefSeq:YP_167152.1 ProteinModelPortal:Q5LS53
GeneID:3192692 KEGG:sil:SPO1917 PATRIC:23377163
ProtClustDB:CLSK933677 Uniprot:Q5LS53
Length = 481
Score = 117 (46.2 bits), Expect = 0.00071, P = 0.00071
Identities = 41/143 (28%), Positives = 62/143 (43%)
Query: 152 GETEALIKLNERLSQEIESFKSGVYLSNQVSPDLTGPPTSQSAALKFGCLSVRRFYWALH 211
GE AL +L+ ++ I G Y + + P G T S AL G + R W H
Sbjct: 205 GEAAALERLDRFIATGI-----GQYDACRDLPAGDGTSTL-SDALSLGEIGPRTL-W--H 255
Query: 212 DHFNTIHEGRPPSHFNITGQLIWREYFYTMSAHNPYYDQMEKNPICLNIPWLPESHPNKE 271
H+G + QL+WR++ Y + H P+ P PW + P
Sbjct: 256 RAGEAAHKGAQGAE-TFLKQLVWRDFAYHLMYHTPHLLSENWRPGWEVFPWATD--PADP 312
Query: 272 KYLNAWKNGQTGYPFIDAVMRQL 294
++ AW G+TG P +DA MR++
Sbjct: 313 GFV-AWTRGRTGVPLVDAAMREM 334
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.139 0.444 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 407 407 0.00078 118 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 57
No. of states in DFA: 617 (66 KB)
Total size of DFA: 302 KB (2155 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.79u 0.09s 35.88t Elapsed: 00:00:02
Total cpu time: 35.80u 0.09s 35.89t Elapsed: 00:00:02
Start: Thu Aug 15 13:57:33 2013 End: Thu Aug 15 13:57:35 2013