BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6305
(52 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|443724902|gb|ELU12703.1| hypothetical protein CAPTEDRAFT_226189 [Capitella teleta]
Length = 564
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEASLN-SVLYPVFIFDGETAG 50
+ +V VHWFRHGLRLHDNP+L E N LYP+FI DGE AG
Sbjct: 24 DRDQVVVHWFRHGLRLHDNPSLMEGLRNCKELYPIFILDGEVAG 67
>gi|390351006|ref|XP_786331.2| PREDICTED: cryptochrome-1-like [Strongylocentrotus purpuratus]
Length = 439
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/38 (71%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
+HWFRHGLRLHDNPAL E +L YPVFIFD E AG
Sbjct: 7 IHWFRHGLRLHDNPALLEGMTLGKEFYPVFIFDNEVAG 44
>gi|405961052|gb|EKC26912.1| Cryptochrome-1 [Crassostrea gigas]
Length = 517
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
N +EV VHWFRHGLR HDNP+L + S YPVFIFDGE AG
Sbjct: 4 NREEVVVHWFRHGLRFHDNPSLIDGLSECDRFYPVFIFDGEVAG 47
>gi|124107288|dbj|BAF45421.1| cryptochrome precursor [Dianemobius nigrofasciatus]
Length = 539
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLN-SVLYPVFIFDGETAG 50
+K+VAVH FRHGLRLHDNPAL +A + P+FIFDGE+AG
Sbjct: 8 HKKVAVHRFRHGLRLHDNPALLDAVKDCDAFLPIFIFDGESAG 50
>gi|157104635|ref|XP_001648498.1| DNA photolyase [Aedes aegypti]
gi|122106526|sp|Q17DK5.1|CRY1_AEDAE RecName: Full=Cryptochrome-1
gi|108880271|gb|EAT44496.1| AAEL004146-PA [Aedes aegypti]
Length = 545
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/42 (64%), Positives = 30/42 (71%), Gaps = 7/42 (16%)
Query: 16 WFRHGLRLHDNPALFEASLNS-------VLYPVFIFDGETAG 50
WFRHGLRLHDNP+L EA N LYP+FIFDGE+AG
Sbjct: 8 WFRHGLRLHDNPSLLEALRNDGTGSESVRLYPIFIFDGESAG 49
>gi|289741509|gb|ADD19502.1| deoxyribodipyrimidine photolyase/cryptochrome [Glossina morsitans
morsitans]
Length = 536
Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNS----VLYPVFIFDGETAG 50
V V WFRHGLRLHDNPAL EA + L P+FIFDGE+AG
Sbjct: 3 VNVLWFRHGLRLHDNPALLEALADREKGIALVPIFIFDGESAG 45
>gi|284506737|dbj|BAI67362.1| cryptochrome [Bactrocera cucurbitae]
Length = 547
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEA----SLNSVLYPVFIFDGETAG 50
K V WFRHGLRLHDNPAL EA S L P+FIFDGE+AG
Sbjct: 2 TKRANVLWFRHGLRLHDNPALLEAISDKSEGIALIPLFIFDGESAG 47
>gi|51944883|gb|AAU14170.1| cryptochrome [Bactrocera tryoni]
Length = 547
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 31/45 (68%), Gaps = 4/45 (8%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSV----LYPVFIFDGETAG 50
K V WFRHGLRLHDNPAL EA + L P+FIFDGE+AG
Sbjct: 3 KRANVMWFRHGLRLHDNPALLEAISDKTEGIALIPLFIFDGESAG 47
>gi|307611923|ref|NP_001182628.1| cryptochrome 1 [Bombyx mori]
gi|306416108|gb|ADM86932.1| cryptochrome 1 [Bombyx mori]
gi|306416112|gb|ADM86934.1| cryptochrome 1 [Bombyx mori]
Length = 536
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 30/40 (75%), Gaps = 2/40 (5%)
Query: 13 AVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFDGETAG 50
+V WFRHGLRLHDNP+L A + +P+FIFDGETAG
Sbjct: 5 SVLWFRHGLRLHDNPSLHSALEETSGPFFPIFIFDGETAG 44
>gi|312371404|gb|EFR19605.1| hypothetical protein AND_22153 [Anopheles darlingi]
Length = 608
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/43 (60%), Positives = 30/43 (69%), Gaps = 8/43 (18%)
Query: 16 WFRHGLRLHDNPALFEASLNSV--------LYPVFIFDGETAG 50
WFRHGLRLHDNP+L EA + L+PVFIFDGE+AG
Sbjct: 69 WFRHGLRLHDNPSLLEALKSDCQSSNEPVKLFPVFIFDGESAG 111
>gi|195107460|ref|XP_001998330.1| GI23904 [Drosophila mojavensis]
gi|193914924|gb|EDW13791.1| GI23904 [Drosophila mojavensis]
Length = 539
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS----VLYPVFIFDGETAG 50
V WFRHGLRLHDNPA+ A N L P+FIFDGE+AG
Sbjct: 8 VIWFRHGLRLHDNPAMLAALSNKDQGVALIPIFIFDGESAG 48
>gi|158301399|ref|XP_321104.4| AGAP001958-PA [Anopheles gambiae str. PEST]
gi|205696380|sp|Q7PYI7.4|CRY1_ANOGA RecName: Full=Cryptochrome-1; Short=agCRY1
gi|78191295|gb|ABB29886.1| cryptochrome 1 [Anopheles gambiae]
gi|157012451|gb|EAA01270.4| AGAP001958-PA [Anopheles gambiae str. PEST]
Length = 545
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 9/44 (20%)
Query: 16 WFRHGLRLHDNPALFEA--------SLNSV-LYPVFIFDGETAG 50
WFRHGLRLHDNP+L EA S +V L+P+FIFDGE+AG
Sbjct: 8 WFRHGLRLHDNPSLLEALKSDCVNQSSEAVKLFPIFIFDGESAG 51
>gi|195055524|ref|XP_001994667.1| GH17366 [Drosophila grimshawi]
gi|193892430|gb|EDV91296.1| GH17366 [Drosophila grimshawi]
Length = 539
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS----VLYPVFIFDGETAG 50
V WFRHGLRLHDNPAL A + L P+FIFDGE+AG
Sbjct: 8 VIWFRHGLRLHDNPALLSALADKDYGIALIPIFIFDGESAG 48
>gi|195451205|ref|XP_002072813.1| GK13802 [Drosophila willistoni]
gi|194168898|gb|EDW83799.1| GK13802 [Drosophila willistoni]
Length = 543
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS----VLYPVFIFDGETAG 50
V WFRHGLRLHDNPAL A + L P+FIFDGE+AG
Sbjct: 10 VIWFRHGLRLHDNPALLSALADKDQGIALIPIFIFDGESAG 50
>gi|195389935|ref|XP_002053627.1| GJ24000 [Drosophila virilis]
gi|194151713|gb|EDW67147.1| GJ24000 [Drosophila virilis]
Length = 539
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS----VLYPVFIFDGETAG 50
V WFRHGLRLHDNPAL A + L P+FIFDGE+AG
Sbjct: 8 VIWFRHGLRLHDNPALLAALSDKDQGIALIPIFIFDGESAG 48
>gi|194744725|ref|XP_001954843.1| GF16541 [Drosophila ananassae]
gi|190627880|gb|EDV43404.1| GF16541 [Drosophila ananassae]
Length = 542
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/41 (65%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 14 VHWFRHGLRLHDNPALF----EASLNSVLYPVFIFDGETAG 50
V WFRHGLRLHDNPAL E L PVFIFDGE+AG
Sbjct: 8 VIWFRHGLRLHDNPALLAALAEKDQGIALLPVFIFDGESAG 48
>gi|406507545|gb|AFS34616.1| cryptochrome 1, partial [Clunio marinus]
Length = 378
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 32/45 (71%), Gaps = 8/45 (17%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-------VLYPVFIFDGETAG 50
+V WFR GLRLHDNPAL EA +N+ YPVFIFDGE+AG
Sbjct: 4 SVLWFRQGLRLHDNPALIEA-INTDDGRRQVTFYPVFIFDGESAG 47
>gi|13022111|gb|AAK11644.1|AF333998_1 cryptochrome [Antheraea pernyi]
Length = 525
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 2/40 (5%)
Query: 13 AVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFDGETAG 50
+V WFRHGLRLHDNP+L A + +P+F+FDGETAG
Sbjct: 5 SVLWFRHGLRLHDNPSLHAALEDRSVPFFPIFVFDGETAG 44
>gi|210136298|gb|ACJ08741.1| cryptochrome [Neobellieria bullata]
Length = 542
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 29/39 (74%), Gaps = 4/39 (10%)
Query: 16 WFRHGLRLHDNPALFEASLNS----VLYPVFIFDGETAG 50
WFRHGLRLHDNPAL +A + L P+FIFDGE+AG
Sbjct: 7 WFRHGLRLHDNPALLDAISDKDEGIELLPIFIFDGESAG 45
>gi|62001759|gb|AAX58599.1| cryptochrome [Danaus plexippus]
gi|357603254|gb|EHJ63675.1| cryptochrome [Danaus plexippus]
Length = 534
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 30/39 (76%), Gaps = 2/39 (5%)
Query: 14 VHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFDGETAG 50
V WFRHGLRLHDNP+L A +S +P+FIFDGETAG
Sbjct: 6 VIWFRHGLRLHDNPSLHSALEDASSPFFPIFIFDGETAG 44
>gi|284506739|dbj|BAI67363.1| cryptochrome [Bactrocera cucurbitae]
Length = 547
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEA----SLNSVLYPVFIFDGETAG 50
K V WF HGLRLHDNPAL EA S L P+FIFDGE+AG
Sbjct: 2 TKRANVLWFXHGLRLHDNPALLEAISDKSEGIALIPLFIFDGESAG 47
>gi|406855882|pdb|4GU5|A Chain A, Structure Of Full-Length Drosophila Cryptochrome
gi|406855883|pdb|4GU5|B Chain B, Structure Of Full-Length Drosophila Cryptochrome
Length = 539
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS----VLYPVFIFDGETAG 50
V WFRHGLRLHDNPAL A + L PVFIFDGE+AG
Sbjct: 8 VIWFRHGLRLHDNPALLAALADKDQGIALIPVFIFDGESAG 48
>gi|195497880|ref|XP_002096288.1| GE25590 [Drosophila yakuba]
gi|194182389|gb|EDW96000.1| GE25590 [Drosophila yakuba]
Length = 542
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS----VLYPVFIFDGETAG 50
V WFRHGLRLHDNPAL A + L PVFIFDGE+AG
Sbjct: 8 VIWFRHGLRLHDNPALLAALADKDQGIALIPVFIFDGESAG 48
>gi|195569723|ref|XP_002102858.1| GD19278 [Drosophila simulans]
gi|194198785|gb|EDX12361.1| GD19278 [Drosophila simulans]
Length = 542
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS----VLYPVFIFDGETAG 50
V WFRHGLRLHDNPAL A + L PVFIFDGE+AG
Sbjct: 8 VIWFRHGLRLHDNPALLAALADKDQGIALIPVFIFDGESAG 48
>gi|3986298|dbj|BAA35000.1| blue light photoreceptor [Drosophila melanogaster]
Length = 542
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS----VLYPVFIFDGETAG 50
V WFRHGLRLHDNPAL A + L PVFIFDGE+AG
Sbjct: 8 VIWFRHGLRLHDNPALLAALADKDQGIALIPVFIFDGESAG 48
>gi|24648152|ref|NP_732407.1| cryptochrome [Drosophila melanogaster]
gi|74960862|sp|O77059.1|CRY1_DROME RecName: Full=Cryptochrome-1; Short=DmCRY1; Short=dcry; AltName:
Full=Blue light photoreceptor
gi|3724370|dbj|BAA33787.1| blue-light receptor [Drosophila melanogaster]
gi|3983154|gb|AAC83828.1| cryptochrome [Drosophila melanogaster]
gi|7300494|gb|AAF55649.1| cryptochrome [Drosophila melanogaster]
gi|15291339|gb|AAK92938.1| GH16672p [Drosophila melanogaster]
gi|220945540|gb|ACL85313.1| cry-PA [synthetic construct]
gi|220955344|gb|ACL90215.1| cry-PA [synthetic construct]
Length = 542
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS----VLYPVFIFDGETAG 50
V WFRHGLRLHDNPAL A + L PVFIFDGE+AG
Sbjct: 8 VIWFRHGLRLHDNPALLAALADKDQGIALIPVFIFDGESAG 48
>gi|194900020|ref|XP_001979555.1| GG23184 [Drosophila erecta]
gi|190651258|gb|EDV48513.1| GG23184 [Drosophila erecta]
Length = 542
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS----VLYPVFIFDGETAG 50
V WFRHGLRLHDNPAL A + L PVFIFDGE+AG
Sbjct: 8 VIWFRHGLRLHDNPALLAALADKDQGVALIPVFIFDGESAG 48
>gi|195353691|ref|XP_002043337.1| GM26830 [Drosophila sechellia]
gi|194127451|gb|EDW49494.1| GM26830 [Drosophila sechellia]
Length = 542
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS----VLYPVFIFDGETAG 50
V WFRHGLRLHDNPAL A + + PVFIFDGE+AG
Sbjct: 8 VIWFRHGLRLHDNPALLAALADKDQGIAIIPVFIFDGESAG 48
>gi|327282060|ref|XP_003225762.1| PREDICTED: cryptochrome-1-like [Anolis carolinensis]
Length = 530
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/35 (65%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
V++HWFR GLRLHDNPAL A NS +YP+FI D
Sbjct: 4 VSIHWFRKGLRLHDNPALLAAMKNSAEIYPIFILD 38
>gi|195157984|ref|XP_002019874.1| GL12637 [Drosophila persimilis]
gi|198455482|ref|XP_001360014.2| GA17677 [Drosophila pseudoobscura pseudoobscura]
gi|205696352|sp|Q293P8.2|CRY1_DROPS RecName: Full=Cryptochrome-1
gi|194116465|gb|EDW38508.1| GL12637 [Drosophila persimilis]
gi|198133263|gb|EAL29166.2| GA17677 [Drosophila pseudoobscura pseudoobscura]
Length = 540
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 14 VHWFRHGLRLHDNPALF----EASLNSVLYPVFIFDGETAG 50
V WFRHGLRLHDNPAL E L PVFIFDGE+AG
Sbjct: 8 VLWFRHGLRLHDNPALLAALEEKDQGIPLIPVFIFDGESAG 48
>gi|62955979|gb|AAY23345.1| antennal cryptochrome [Mamestra brassicae]
Length = 548
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 13 AVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFDGETAG 50
+V WFRHGLRLHDNP+L A +PVFIFDGETAG
Sbjct: 5 SVLWFRHGLRLHDNPSLHSALEEKGFPFFPVFIFDGETAG 44
>gi|422295899|gb|EKU23198.1| cryptochrome [Nannochloropsis gaditana CCMP526]
Length = 560
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/37 (62%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
+ V++HWFR GLRLHDNPAL EA + +YPVFI D
Sbjct: 16 RTVSLHWFRKGLRLHDNPALLEACEGATHVYPVFILD 52
>gi|283476381|emb|CAY26038.1| chryptochrome 1 [Acyrthosiphon pisum]
Length = 553
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/38 (68%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGET 48
VAVHWFR+GLRLHDNPAL EA N+ L +FIFD T
Sbjct: 3 VAVHWFRNGLRLHDNPALIEAHNNAEKLITLFIFDETT 40
>gi|283806550|ref|NP_001164532.1| chryptochrome 1 [Acyrthosiphon pisum]
Length = 553
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/38 (68%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGET 48
VAVHWFR+GLRLHDNPAL EA N+ L +FIFD T
Sbjct: 3 VAVHWFRNGLRLHDNPALIEAHNNAEKLITLFIFDETT 40
>gi|321474453|gb|EFX85418.1| DNA photolyase 1 [Daphnia pulex]
Length = 524
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 28/44 (63%), Gaps = 7/44 (15%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEASLNSV------LYPVFIFD 45
NNK V +HWFR GLRLHDNPAL A L V L PVFI D
Sbjct: 2 NNKPVVIHWFRKGLRLHDNPALLNA-LEKVGESHYELRPVFILD 44
>gi|301622212|ref|XP_002940429.1| PREDICTED: cryptochrome-1-like [Xenopus (Silurana) tropicalis]
Length = 531
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
K ++HWFR GLRLHDNPAL A + LYP+FI D
Sbjct: 2 KHNSIHWFRKGLRLHDNPALLAAMKDCAELYPIFILD 38
>gi|183986194|gb|AAI66277.1| LOC100144974 protein [Xenopus (Silurana) tropicalis]
Length = 531
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
K ++HWFR GLRLHDNPAL A + LYP+FI D
Sbjct: 2 KHNSIHWFRKGLRLHDNPALLAAMKDCAELYPIFILD 38
>gi|47217864|emb|CAG02357.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2050
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLN-SVLYPVFIFD 45
++HWFR GLRLHDNPAL A + LYPVFI D
Sbjct: 5 SIHWFRKGLRLHDNPALMAALRDCKELYPVFILD 38
>gi|187608706|ref|NP_001120012.1| uncharacterized protein LOC100144974 [Xenopus (Silurana)
tropicalis]
gi|165970470|gb|AAI58310.1| LOC100144974 protein [Xenopus (Silurana) tropicalis]
Length = 531
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 28/38 (73%), Gaps = 3/38 (7%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSV--LYPVFIFD 45
K ++HWFR GLRLHDNPAL A++N LYP+FI D
Sbjct: 2 KHNSIHWFRKGLRLHDNPALL-AAMNDCAELYPIFILD 38
>gi|147865945|emb|CAN80978.1| hypothetical protein VITISV_029095 [Vitis vinifera]
Length = 633
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 5/47 (10%)
Query: 4 PNSPN----NKEVAVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
PNSPN + ++ WFR GLR+HDNPAL A++ S +YPVF+ D
Sbjct: 141 PNSPNPSMASGSGSLMWFRKGLRIHDNPALQHAAMESNCVYPVFVID 187
>gi|133754342|gb|ABO38435.1| cryptochrome 2 [Antheraea pernyi]
Length = 788
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 3 TPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSVLYP-VFIFD 45
TP P+ K VHWFR GLRLHDNPAL E +N+ + VFI D
Sbjct: 27 TPRRPHTKHT-VHWFRKGLRLHDNPALREGLVNATTFRCVFIID 69
>gi|298708156|emb|CBJ30497.1| cryptochrome 1 [Ectocarpus siliculosus]
Length = 542
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 6 SPNNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETA 49
S + + ++HWFR GLRLHDN AL EA + LYP+F+ D + A
Sbjct: 2 SSSKEPSSIHWFRKGLRLHDNRALLEACNGTASLYPLFVLDSDPA 46
>gi|432852920|ref|XP_004067451.1| PREDICTED: cryptochrome-1-like [Oryzias latipes]
Length = 521
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLN-SVLYPVFIFD 45
V +HWFR GLRLHDNPAL A + LYP+FI D
Sbjct: 4 VCIHWFRKGLRLHDNPALMAALRDCKELYPLFILD 38
>gi|189346874|ref|YP_001943403.1| deoxyribodipyrimidine photo-lyase [Chlorobium limicola DSM 245]
gi|189341021|gb|ACD90424.1| Deoxyribodipyrimidine photo-lyase [Chlorobium limicola DSM 245]
Length = 473
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
+ +HWFR LRL DNP+L+ A+L + PV+I D AG F
Sbjct: 5 LTIHWFRQDLRLEDNPSLYYAALKGSVLPVYILDDRNAGDF 45
>gi|359483005|ref|XP_002285327.2| PREDICTED: (6-4)DNA photolyase [Vitis vinifera]
Length = 564
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 5/47 (10%)
Query: 4 PNSPN----NKEVAVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
PNSPN + ++ WFR GLR+HDNPAL A+ S +YPVF+ D
Sbjct: 20 PNSPNPSMASGSSSLMWFRKGLRIHDNPALQHAAKESNCVYPVFVID 66
>gi|242020203|ref|XP_002430545.1| Deoxyribodipyrimidine photo-lyase, putative [Pediculus humanus
corporis]
gi|212515709|gb|EEB17807.1| Deoxyribodipyrimidine photo-lyase, putative [Pediculus humanus
corporis]
Length = 506
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 1 MDTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSVLYP-VFIFDGETAG 50
M +S N+ + VHWFR GLRLHDNP+L E NSV + VF+ D AG
Sbjct: 1 MSDNSSQNSGKHTVHWFRKGLRLHDNPSLREGIKNSVTFRCVFVIDPWFAG 51
>gi|348500170|ref|XP_003437646.1| PREDICTED: cryptochrome-1-like [Oreochromis niloticus]
Length = 522
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/33 (66%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEASLN-SVLYPVFIFD 45
+HWFR GLRLHDNPAL A + LYPVFI D
Sbjct: 6 IHWFRKGLRLHDNPALMAALKDCKQLYPVFILD 38
>gi|170065332|ref|XP_001867895.1| cryptochrome-1 [Culex quinquefasciatus]
gi|167882412|gb|EDS45795.1| cryptochrome-1 [Culex quinquefasciatus]
Length = 539
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 28/45 (62%), Gaps = 7/45 (15%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEA-------SLNSVLYPVFIFD 45
++K+ AVHWFR GLR+HDNPAL A VL PVFI D
Sbjct: 2 SSKQTAVHWFRKGLRVHDNPALAAAVDRVRGQPSKLVLRPVFILD 46
>gi|313234987|emb|CBY24933.1| unnamed protein product [Oikopleura dioica]
Length = 374
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
VHWFR GLRLHDN AL+ A S V++P++I D
Sbjct: 8 VHWFRKGLRLHDNEALYHAVTTSQVVFPIYILD 40
>gi|410912170|ref|XP_003969563.1| PREDICTED: uncharacterized protein LOC101062553 [Takifugu
rubripes]
Length = 1321
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEASLN-SVLYPVFIFD 45
+HWFR GLRLHDNP L A + LYPVFI D
Sbjct: 6 IHWFRKGLRLHDNPGLMAALRDCKELYPVFILD 38
>gi|219118654|ref|XP_002180095.1| cryptochrome photolyase family 1 [Phaeodactylum tricornutum CCAP
1055/1]
gi|217408352|gb|EEC48286.1| cryptochrome photolyase family 1 [Phaeodactylum tricornutum CCAP
1055/1]
Length = 550
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGE 47
+VA+HWFR+GLR HDNP L +A S L P+++ D E
Sbjct: 10 DVAIHWFRNGLRFHDNPCLLDACQKSESLLPIYVVDPE 47
>gi|260787134|ref|XP_002588610.1| hypothetical protein BRAFLDRAFT_131753 [Branchiostoma floridae]
gi|229273775|gb|EEN44621.1| hypothetical protein BRAFLDRAFT_131753 [Branchiostoma floridae]
Length = 521
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 10/53 (18%)
Query: 3 TPNSPNNKEVA---------VHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
T + NKEV+ +HWFR GLR HDNP+L A S +YPVF+ D
Sbjct: 49 TGSEMTNKEVSMEVREQHNTIHWFRKGLRFHDNPSLLHALRTSRHVYPVFVMD 101
>gi|313212920|emb|CBY36823.1| unnamed protein product [Oikopleura dioica]
Length = 476
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
VHWFR GLRLHDN AL+ A S V++P++I D
Sbjct: 8 VHWFRKGLRLHDNEALYHAVTTSQVVFPIYILD 40
>gi|302828718|ref|XP_002945926.1| DNA photolyase [Volvox carteri f. nagariensis]
gi|300268741|gb|EFJ52921.1| DNA photolyase [Volvox carteri f. nagariensis]
Length = 621
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
++ WFR GLRLHDNPAL EA + +YPVFI D
Sbjct: 7 SILWFRKGLRLHDNPALLEACRGAAHVYPVFILD 40
>gi|147906624|ref|NP_001081421.1| 6-4 photolyase [Xenopus laevis]
gi|8809676|dbj|BAA97126.1| 6-4 photolyase [Xenopus laevis]
gi|213625040|gb|AAI69683.1| 6-4 photolyase [Xenopus laevis]
gi|213627768|gb|AAI69685.1| 6-4 photolyase [Xenopus laevis]
Length = 526
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
++HWFR GLRLHDNPAL A + L+P+FI D
Sbjct: 5 SIHWFRKGLRLHDNPALLAAMKDCAELHPIFILD 38
>gi|449018268|dbj|BAM81670.1| 6-4 photolyase [Cyanidioschyzon merolae strain 10D]
Length = 519
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 13 AVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
AVHWFR GLRLHDNPAL +A N + + PVF D
Sbjct: 10 AVHWFRKGLRLHDNPALLDAVQNPTTTYVLPVFCLD 45
>gi|397563398|gb|EJK43782.1| hypothetical protein THAOC_37740, partial [Thalassiosira oceanica]
Length = 221
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 4/45 (8%)
Query: 5 NSPNNKEVAVHWFRHGLRLHDNPALFEA-SLNS---VLYPVFIFD 45
++ + + VA+HWFR GLRLHDNPAL A SL ++PV++ D
Sbjct: 170 SAKSGENVAMHWFRKGLRLHDNPALLHALSLTKNGGSIFPVYVVD 214
>gi|156383457|ref|XP_001632850.1| predicted protein [Nematostella vectensis]
gi|156219912|gb|EDO40787.1| predicted protein [Nematostella vectensis]
Length = 492
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 29/39 (74%), Gaps = 3/39 (7%)
Query: 13 AVHWFRHGLRLHDNPALFEASLN--SVLYPVFIFDGETA 49
+VHWFR LRLHDNP+L ASL+ S +P+++ D E+A
Sbjct: 4 SVHWFRKDLRLHDNPSLL-ASLDNCSTFFPIYVLDMESA 41
>gi|167526345|ref|XP_001747506.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773952|gb|EDQ87586.1| predicted protein [Monosiga brevicollis MX1]
Length = 486
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
++ +++HWFR G RLHDNPAL+ A + +YPVF+ D
Sbjct: 2 SSSSISLHWFRKGQRLHDNPALWRALRGATQVYPVFVID 40
>gi|224002945|ref|XP_002291144.1| Cryptochrome/Photolyase family 1 [Thalassiosira pseudonana
CCMP1335]
gi|220972920|gb|EED91251.1| Cryptochrome/Photolyase family 1, partial [Thalassiosira
pseudonana CCMP1335]
Length = 556
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 5/39 (12%)
Query: 12 VAVHWFRHGLRLHDNPALFEA-----SLNSVLYPVFIFD 45
VA+HWFR GLR+HDNPAL A + +YPV+I D
Sbjct: 14 VAMHWFRKGLRVHDNPALLHALAITKDTSGPIYPVYIVD 52
>gi|406507547|gb|AFS34617.1| cryptochrome 2 [Clunio marinus]
Length = 657
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 1 MDTPNS-PNNKEVAVHWFRHGLRLHDNPALFEASLNSVLY-PVFIFDGETAG 50
M PN P ++ VHWFR GLRLHDNPAL E N+ + VF D AG
Sbjct: 1 MPDPNQLPKKEKHIVHWFRKGLRLHDNPALREGLKNATTFRAVFFVDPWFAG 52
>gi|159479960|ref|XP_001698054.1| cryptochrome photoreceptor [Chlamydomonas reinhardtii]
gi|158273853|gb|EDO99639.1| cryptochrome photoreceptor [Chlamydomonas reinhardtii]
Length = 595
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
++ WFR GLRLHDNPAL EA ++ +YPVF+ D
Sbjct: 7 SIIWFRKGLRLHDNPALLEACKDAKHVYPVFVLD 40
>gi|223647614|gb|ACN10565.1| Cryptochrome-1 [Salmo salar]
Length = 523
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEASLN-SVLYPVFIFD 45
+HWFR GLRLHDNPAL A + +YPVF+ D
Sbjct: 6 IHWFRKGLRLHDNPALVAALRDCKEIYPVFVLD 38
>gi|157115313|ref|XP_001658195.1| DNA photolyase [Aedes aegypti]
gi|108883518|gb|EAT47743.1| AAEL001175-PA [Aedes aegypti]
Length = 553
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEA-------SLNSVLYPVFIFD 45
++++ VHWFR GLRLHDNPAL A L PVFI D
Sbjct: 2 SSQQTVVHWFRKGLRLHDNPALLAAIRRCRDSPQQYALRPVFILD 46
>gi|254373077|ref|ZP_04988566.1| hypothetical protein FTCG_00652 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570804|gb|EDN36458.1| hypothetical protein FTCG_00652 [Francisella novicida GA99-3549]
Length = 464
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
+K++A+HWFR LRL DNPAL++AS +FI D
Sbjct: 2 SKKIAIHWFRQDLRLADNPALYQASQADETITIFILD 38
>gi|254374529|ref|ZP_04990010.1| deoxyribodipyrimidine photolyase [Francisella novicida GA99-3548]
gi|385793100|ref|YP_005826076.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|151572248|gb|EDN37902.1| deoxyribodipyrimidine photolyase [Francisella novicida GA99-3548]
gi|332678425|gb|AEE87554.1| Deoxyribodipyrimidine photolyase [Francisella cf. novicida Fx1]
Length = 464
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
+K++A+HWFR LRL DNPAL++AS +FI D
Sbjct: 2 SKKIAIHWFRQDLRLADNPALYQASQADETITIFILD 38
>gi|28279917|gb|AAH44204.1| Cry5 protein, partial [Danio rerio]
Length = 545
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 1 MDTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
+ +P + +HWFR GLRLHDNPAL A + +YP+F+ D
Sbjct: 19 LHSPKATTMSHNTIHWFRKGLRLHDNPALIAALKDCRHIYPLFLLD 64
>gi|387824331|ref|YP_005823802.1| Deoxyribodipyrimidine photolyase [Francisella cf. novicida 3523]
gi|328675930|gb|AEB28605.1| Deoxyribodipyrimidine photolyase [Francisella cf. novicida 3523]
Length = 464
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
+K+VA+HWFR LRL DNPAL+ AS +FI D
Sbjct: 2 SKKVAIHWFRQDLRLADNPALYHASQADETITIFILD 38
>gi|118497711|ref|YP_898761.1| deoxyribodipyrimidine photolyase [Francisella novicida U112]
gi|194323683|ref|ZP_03057459.1| deoxyribodipyrimidine photolyase family protein [Francisella
novicida FTE]
gi|208779776|ref|ZP_03247120.1| deoxyribodipyrimidine photolyase family protein [Francisella
novicida FTG]
gi|118423617|gb|ABK90007.1| deoxyribodipyrimidine photolyase [Francisella novicida U112]
gi|194322047|gb|EDX19529.1| deoxyribodipyrimidine photolyase family protein [Francisella
tularensis subsp. novicida FTE]
gi|208744231|gb|EDZ90531.1| deoxyribodipyrimidine photolyase family protein [Francisella
novicida FTG]
Length = 464
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
+K++A+HWFR LRL DNPAL++AS +FI D
Sbjct: 2 SKKIAIHWFRQDLRLADNPALYQASQADETITIFILD 38
>gi|397603437|gb|EJK58421.1| hypothetical protein THAOC_21454 [Thalassiosira oceanica]
Length = 564
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 4/45 (8%)
Query: 5 NSPNNKEVAVHWFRHGLRLHDNPALFEA-SLNS---VLYPVFIFD 45
++ + + VA+HWFR GLRLHDNPAL A SL ++PV++ D
Sbjct: 2 SAKSGENVAMHWFRKGLRLHDNPALLHALSLTKNGGSIFPVYVVD 46
>gi|405975335|gb|EKC39908.1| Cryptochrome-1 [Crassostrea gigas]
Length = 510
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/37 (59%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
K A+HWFR GLRLHDNPAL A + + PVFI D
Sbjct: 2 KTCAIHWFRKGLRLHDNPALQAACKVADDVKPVFILD 38
>gi|87120903|ref|ZP_01076795.1| putative photolyase [Marinomonas sp. MED121]
gi|86163741|gb|EAQ65014.1| putative photolyase [Marinomonas sp. MED121]
Length = 475
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
NK + +HWFR LRL DNPAL A + P++I D + A F
Sbjct: 2 NKPLVIHWFRQDLRLSDNPALSAAVSQGDVLPIYILDDKNANEF 45
>gi|303283874|ref|XP_003061228.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457579|gb|EEH54878.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 559
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLN-SVLYPVFIFD 45
++HWFR GLR+HDNPAL +A + + + P+F+ D
Sbjct: 10 SIHWFRKGLRVHDNPALVDACADATAVQPIFVLD 43
>gi|260829106|ref|XP_002609503.1| hypothetical protein BRAFLDRAFT_230208 [Branchiostoma floridae]
gi|229294860|gb|EEN65513.1| hypothetical protein BRAFLDRAFT_230208 [Branchiostoma floridae]
Length = 522
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
+HWFR GLR HDNP+L A S +YPVF+ D
Sbjct: 10 IHWFRKGLRFHDNPSLLHALRTSHHVYPVFVMD 42
>gi|326933621|ref|XP_003212899.1| PREDICTED: cryptochrome-1-like [Meleagris gallopavo]
Length = 530
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
+H FR GLRLHDNPAL A +S V+YPV+I D
Sbjct: 6 IHLFRKGLRLHDNPALLAALQSSEVVYPVYILD 38
>gi|390339199|ref|XP_788938.2| PREDICTED: cryptochrome-2-like [Strongylocentrotus purpuratus]
Length = 524
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 7 PNNKEVAVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
P+N +HWFR GLR+HDNPAL A + V P+FI D
Sbjct: 2 PHNS--TIHWFRKGLRIHDNPALLTAIQGTKVFRPIFILD 39
>gi|148533563|gb|ABQ84983.1| antennal cryptochrome 2 [Spodoptera littoralis]
Length = 625
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEASLNSVLYP-VFIFD 45
+N + VHWFR GLRLHDNPAL E L++ + VFI D
Sbjct: 34 SNGKHIVHWFRKGLRLHDNPALKEGLLDAATFRCVFIID 72
>gi|110626125|ref|NP_001034685.1| cryptochrome 4 [Gallus gallus]
gi|34500076|gb|AAQ73619.1| cryptochrome-like protein [Gallus gallus]
Length = 529
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
+H FR GLRLHDNPAL A +S V+YPV+I D
Sbjct: 6 IHLFRKGLRLHDNPALLAALQSSEVVYPVYILD 38
>gi|66910424|gb|AAH97079.1| Cry4 protein [Danio rerio]
Length = 418
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
+H FR GLRLHDNP+L A + +S LYPV++ D
Sbjct: 6 IHLFRKGLRLHDNPSLLGALASSSALYPVYVLD 38
>gi|333755446|gb|ADN94465.2| cryptochrome 2 [Helicoverpa armigera]
Length = 657
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEASLNSVLYP-VFIFD 45
N K + VHWFR GLRLHDNPAL E L++ + VFI D
Sbjct: 34 NGKHI-VHWFRKGLRLHDNPALREGLLDAATFRCVFIID 71
>gi|387887266|ref|YP_006317565.1| deoxyribodipyrimidine photo-lyase [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386872082|gb|AFJ44089.1| deoxyribodipyrimidine photo-lyase [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 464
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
+K++A+HWFR LRL DNPAL +AS +FI D
Sbjct: 2 SKKIAIHWFRQDLRLADNPALHQASQTDETITIFILD 38
>gi|61816948|gb|AAX56342.1| 6-4 photolyase [Dunaliella salina]
Length = 600
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
++ WFR GLRLHDNPAL +A S ++P+FI D
Sbjct: 51 SILWFRKGLRLHDNPALRDACTGSAAVFPIFIID 84
>gi|156393374|ref|XP_001636303.1| predicted protein [Nematostella vectensis]
gi|156223405|gb|EDO44240.1| predicted protein [Nematostella vectensis]
Length = 533
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
VHWFR+GLRLHDNPAL EA + + P+++ D
Sbjct: 9 TVHWFRNGLRLHDNPALKEAFETSQTVRPLYVLD 42
>gi|452822894|gb|EME29909.1| photolyase/blue-light receptor [Galdieria sulphuraria]
Length = 444
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 16 WFRHGLRLHDNPALFEASLN-SVLYPVFIFDGETAG 50
WFR+ LRLHDNPALF A+ S++ PV+ FD G
Sbjct: 120 WFRNDLRLHDNPALFRAAEEGSLILPVYCFDPRQFG 155
>gi|156744316|ref|YP_001434445.1| deoxyribodipyrimidine photo-lyase [Roseiflexus castenholzii DSM
13941]
gi|156235644|gb|ABU60427.1| Deoxyribodipyrimidine photo-lyase [Roseiflexus castenholzii DSM
13941]
Length = 487
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNS--VLYPVFIFD 45
+ +HWFR LRLHDNPAL AS+ S + P+FI D
Sbjct: 2 IWIHWFRRDLRLHDNPALHTASIRSDGRVIPLFILD 37
>gi|337755263|ref|YP_004647774.1| deoxyribodipyrimidine photolyase [Francisella sp. TX077308]
gi|336446868|gb|AEI36174.1| Deoxyribodipyrimidine photolyase [Francisella sp. TX077308]
Length = 468
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
+K++A+HWFR LRL DNPAL +AS +FI D
Sbjct: 2 SKKIAIHWFRQDLRLADNPALHQASQADETITIFILD 38
>gi|134302129|ref|YP_001122098.1| deoxyribodipyrimidine photolyase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|421751949|ref|ZP_16188985.1| deoxyribodipyrimidine photolyase [Francisella tularensis subsp.
tularensis AS_713]
gi|421753807|ref|ZP_16190796.1| deoxyribodipyrimidine photolyase [Francisella tularensis subsp.
tularensis 831]
gi|421757530|ref|ZP_16194409.1| deoxyribodipyrimidine photolyase [Francisella tularensis subsp.
tularensis 80700103]
gi|421759384|ref|ZP_16196217.1| deoxyribodipyrimidine photolyase [Francisella tularensis subsp.
tularensis 70102010]
gi|424674702|ref|ZP_18111618.1| deoxyribodipyrimidine photolyase [Francisella tularensis subsp.
tularensis 70001275]
gi|134049906|gb|ABO46977.1| deoxyribodipyrimidine photolyase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|409086284|gb|EKM86404.1| deoxyribodipyrimidine photolyase [Francisella tularensis subsp.
tularensis AS_713]
gi|409086489|gb|EKM86608.1| deoxyribodipyrimidine photolyase [Francisella tularensis subsp.
tularensis 831]
gi|409091110|gb|EKM91115.1| deoxyribodipyrimidine photolyase [Francisella tularensis subsp.
tularensis 70102010]
gi|409092478|gb|EKM92451.1| deoxyribodipyrimidine photolyase [Francisella tularensis subsp.
tularensis 80700103]
gi|417434746|gb|EKT89688.1| deoxyribodipyrimidine photolyase [Francisella tularensis subsp.
tularensis 70001275]
Length = 464
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
+K++A+HWFR LRL DNPAL++ S +FI D
Sbjct: 2 SKKIAIHWFRQDLRLADNPALYQVSQADETITIFILD 38
>gi|197246983|gb|AAI64413.1| Cry4 protein [Danio rerio]
Length = 558
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
+H FR GLRLHDNP+L A + +S LYPV++ D
Sbjct: 6 IHLFRKGLRLHDNPSLLGALASSSTLYPVYVLD 38
>gi|118363134|ref|XP_001014668.1| FAD binding domain of DNA photolyase family protein [Tetrahymena
thermophila]
gi|89296559|gb|EAR94547.1| FAD binding domain of DNA photolyase family protein [Tetrahymena
thermophila SB210]
Length = 486
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Query: 5 NSPNNKEVAVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFDGE 47
N+ ++V++ WFR LRL+DN AL+ A S N V+ P+FIFD E
Sbjct: 50 NAKQKRKVSIFWFRRDLRLNDNTALYNALKSQNEVV-PLFIFDTE 93
>gi|254877189|ref|ZP_05249899.1| deoxyribodipyrimidine photolyase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843210|gb|EET21624.1| deoxyribodipyrimidine photolyase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 464
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
K++A+HWFR LRL DNPAL +AS +FI D
Sbjct: 3 KKIAIHWFRQDLRLADNPALHQASQADETITIFILD 38
>gi|18858471|ref|NP_571862.1| cryptochrome 4 [Danio rerio]
gi|8698594|dbj|BAA96851.1| cryptochrome 4 [Danio rerio]
Length = 558
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
+H FR GLRLHDNP+L A + +S LYPV++ D
Sbjct: 6 IHLFRKGLRLHDNPSLLGALASSSALYPVYVLD 38
>gi|167628126|ref|YP_001678626.1| deoxyribodipyrimidine photo-lyase [Francisella philomiragia
subsp. philomiragia ATCC 25017]
gi|167598127|gb|ABZ88125.1| Deoxyribodipyrimidine photo-lyase [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length = 464
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
K++A+HWFR LRL DNPAL +AS +FI D
Sbjct: 3 KKIAIHWFRQDLRLADNPALHQASQADETITIFILD 38
>gi|27882257|gb|AAH44385.1| Cry4 protein [Danio rerio]
Length = 579
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
+H FR GLRLHDNP+L A + +S LYPV++ D
Sbjct: 27 IHLFRKGLRLHDNPSLLGALASSSTLYPVYVLD 59
>gi|302745164|gb|ADL62685.1| cryptochrome 5, partial [Phreatichthys andruzzii]
Length = 411
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
++HWFR GLRLHDNPAL A + +YP+F+ D
Sbjct: 5 SIHWFRKGLRLHDNPALLAALKDCRHIYPLFLLD 38
>gi|404313305|gb|AFR54427.1| cryptochrome 2 [Mythimna separata]
Length = 757
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 1 MDTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSVLYP-VFIFD 45
+ T P +K + VHWFR GLRLHDNPAL + +++ + VFI D
Sbjct: 13 VSTARRPGDKHI-VHWFRKGLRLHDNPALKDGLVDATTFRCVFIID 57
>gi|18858473|ref|NP_571863.1| cryptochrome 5 [Danio rerio]
gi|8698596|dbj|BAA96852.1| 6-4 photolyase [Danio rerio]
Length = 519
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
+HWFR GLRLHDNPAL A + +YP+F+ D
Sbjct: 6 IHWFRKGLRLHDNPALIAALKDCRHIYPLFLLD 38
>gi|194334030|ref|YP_002015890.1| deoxyribodipyrimidine photo-lyase [Prosthecochloris aestuarii DSM
271]
gi|194311848|gb|ACF46243.1| Deoxyribodipyrimidine photo-lyase [Prosthecochloris aestuarii DSM
271]
Length = 477
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
++ + WFR LRL DNPALF A+ + PV+I D + G +
Sbjct: 2 KRKTVICWFRQDLRLEDNPALFVAAEEGYVLPVYILDDSSPGTW 45
>gi|307611921|ref|NP_001182627.1| cryptochrome 2 [Bombyx mori]
gi|306416110|gb|ADM86933.1| cryptochrome 2 [Bombyx mori]
gi|306416114|gb|ADM86935.1| cryptochrome 2 [Bombyx mori]
Length = 730
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 1 MDTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSVLYP-VFIFD 45
M P K VHWFR GLR+HDNPAL E +++V + VFI D
Sbjct: 24 MSAPRRTPGKHT-VHWFRKGLRIHDNPALREGIIDAVTFRCVFIID 68
>gi|405952216|gb|EKC20054.1| Cleavage stimulation factor 77 kDa subunit [Crassostrea gigas]
Length = 1237
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYP-VFIFDGETAG 50
VHWFR GLRLHDNP+L EA S Y V+I D AG
Sbjct: 701 VHWFRKGLRLHDNPSLREALKGSSSYRCVYILDPWFAG 738
>gi|18400841|ref|NP_566520.1| (6-4)DNA photolyase [Arabidopsis thaliana]
gi|306756349|sp|O48652.2|UVR3_ARATH RecName: Full=(6-4)DNA photolyase; AltName: Full=Protein UV
repair defective 3
gi|332642182|gb|AEE75703.1| (6-4)DNA photolyase [Arabidopsis thaliana]
Length = 556
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
WFR GLR+HDNPAL AS S +YPVF+ D
Sbjct: 29 WFRKGLRVHDNPALEYASKGSEFMYPVFVID 59
>gi|228312124|pdb|3FY4|A Chain A, (6-4) Photolyase Crystal Structure
gi|228312125|pdb|3FY4|B Chain B, (6-4) Photolyase Crystal Structure
gi|228312126|pdb|3FY4|C Chain C, (6-4) Photolyase Crystal Structure
gi|2804280|dbj|BAA24449.1| 6-4 photolyase [Arabidopsis thaliana]
gi|3929918|dbj|BAA34711.1| 6-4 photolyase [Arabidopsis thaliana]
gi|11994334|dbj|BAB02293.1| 6-4 photolyase [Arabidopsis thaliana]
Length = 537
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
WFR GLR+HDNPAL AS S +YPVF+ D
Sbjct: 10 WFRKGLRVHDNPALEYASKGSEFMYPVFVID 40
>gi|363582222|ref|ZP_09315032.1| deoxyribodipyrimidine photo-lyase [Flavobacteriaceae bacterium
HQM9]
Length = 433
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
+E+ + WFR LRLHDN F A S N + P+FIFD E G
Sbjct: 2 QELTIFWFRRDLRLHDNTGFFFALSENKNVLPIFIFDTEILG 43
>gi|224073768|ref|XP_002304163.1| predicted protein [Populus trichocarpa]
gi|222841595|gb|EEE79142.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
++ WFR GLR+HDNPAL AS S +YPVF+ D
Sbjct: 8 SIIWFRKGLRIHDNPALEYASKGSDFVYPVFVID 41
>gi|317106754|dbj|BAJ53248.1| JHL25H03.11 [Jatropha curcas]
Length = 536
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
WFR GLR+HDNPAL AS S +YPVF+ D
Sbjct: 10 WFRKGLRIHDNPALEYASKGSNFVYPVFVID 40
>gi|169656793|ref|YP_001715625.1| hypothetical protein FTA_2149 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|423050532|ref|YP_007008966.1| hypothetical protein F92_04525 [Francisella tularensis subsp.
holarctica F92]
gi|164551861|gb|ABY60985.1| hypothetical protein FTA_2149 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|421951254|gb|AFX70503.1| hypothetical protein F92_04525 [Francisella tularensis subsp.
holarctica F92]
Length = 49
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIF 44
+K++A+HWFR LRL DNPAL++ S +FI
Sbjct: 2 SKKIAIHWFRQDLRLADNPALYQVSQADETITIFIL 37
>gi|384248771|gb|EIE22254.1| UVR3 AtUVR3-like 6-4 DNA photolyase protein [Coccomyxa
subellipsoidea C-169]
Length = 482
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
++ WFR GLRLHDNP+L A + LYPVF+ D
Sbjct: 10 SILWFRKGLRLHDNPSLLAAIKGATHLYPVFVLD 43
>gi|332185330|ref|ZP_08387079.1| DNA photolyase family protein [Sphingomonas sp. S17]
gi|332015054|gb|EGI57110.1| DNA photolyase family protein [Sphingomonas sp. S17]
Length = 455
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 22/35 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
WFR LRLHD PAL A+ + PV+I D ET G
Sbjct: 8 WFRQDLRLHDQPALLAAAEAGPVLPVYILDDETPG 42
>gi|379729344|ref|YP_005321540.1| deoxyribodipyrimidine photolyase [Saprospira grandis str. Lewin]
gi|378574955|gb|AFC23956.1| deoxyribodipyrimidine photolyase [Saprospira grandis str. Lewin]
Length = 466
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 1 MDTPNSPNNKEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
MD P + + WFR LRLHDN L EA +YPV++FD T G
Sbjct: 1 MDMSALPKKAKRVIAWFRLDLRLHDNEMLTEAIKAGEEVYPVYVFDERTFG 51
>gi|195030094|ref|XP_001987903.1| GH10854 [Drosophila grimshawi]
gi|193903903|gb|EDW02770.1| GH10854 [Drosophila grimshawi]
Length = 538
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 7/43 (16%)
Query: 10 KEVAVHWFRHGLRLHDNPALFE-------ASLNSVLYPVFIFD 45
+ VHWFR GLR+HDNPALF+ A + P+FI D
Sbjct: 5 RRTLVHWFRKGLRVHDNPALFQIFEVARAAPEKFYVRPIFILD 47
>gi|399576573|ref|ZP_10770328.1| deoxyribodipyrimidine photolyase [Halogranum salarium B-1]
gi|399238017|gb|EJN58946.1| deoxyribodipyrimidine photolyase [Halogranum salarium B-1]
Length = 492
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
+ A+ WFR LRLHDNP L +A+ L PV+ FD G
Sbjct: 4 DTALIWFRRDLRLHDNPVLVDAARAEALLPVYCFDPREYG 43
>gi|297743390|emb|CBI36257.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
++ WFR GLR+HDNPAL A+ S +YPVF+ D
Sbjct: 7 SLMWFRKGLRIHDNPALQHAAKESNCVYPVFVID 40
>gi|356526185|ref|XP_003531700.1| PREDICTED: (6-4)DNA photolyase-like [Glycine max]
Length = 535
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPALFEASLN-SVLYPVFIFD 45
WFR GLR+HDNPAL AS S LYPVF+ D
Sbjct: 10 WFRKGLRIHDNPALEVASRGASHLYPVFVID 40
>gi|79313247|ref|NP_001030703.1| (6-4)DNA photolyase [Arabidopsis thaliana]
gi|332642183|gb|AEE75704.1| (6-4)DNA photolyase [Arabidopsis thaliana]
Length = 445
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
WFR GLR+HDNPAL AS S +YPVF+ D
Sbjct: 29 WFRKGLRVHDNPALEYASKGSEFMYPVFVID 59
>gi|47212596|emb|CAF93038.1| unnamed protein product [Tetraodon nigroviridis]
Length = 662
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
+VHWFR GLRLHDNPAL EA S L V++ D AG
Sbjct: 5 SVHWFRKGLRLHDNPALQEALSGADSLRCVYVLDPWFAG 43
>gi|312378885|gb|EFR25332.1| hypothetical protein AND_09443 [Anopheles darlingi]
Length = 558
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA-------SLNSVLYPVFIFD 45
KE +HWFR GLR+HDNPAL A L P+F+ D
Sbjct: 4 KETIIHWFRKGLRIHDNPALSLAVDKVRQNPTKYCLRPIFVLD 46
>gi|449488669|ref|XP_004158137.1| PREDICTED: uncharacterized LOC101210685 [Cucumis sativus]
Length = 679
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 1 MDTPNSPN--NKEVAVHWFRHGLRLHDNPALFEASLN-SVLYPVFIFDGETAGLF 52
+ T +SPN +AV WF+H LR+HD+PAL AS S L P++IFD F
Sbjct: 29 VTTHSSPNPITGPLAVLWFKHDLRIHDHPALHAASSQFSSLIPLYIFDSRILSRF 83
>gi|449451936|ref|XP_004143716.1| PREDICTED: uncharacterized protein LOC101210685 [Cucumis sativus]
Length = 679
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 1 MDTPNSPN--NKEVAVHWFRHGLRLHDNPALFEASLN-SVLYPVFIFDGETAGLF 52
+ T +SPN +AV WF+H LR+HD+PAL AS S L P++IFD F
Sbjct: 29 VTTHSSPNPITGPLAVLWFKHDLRIHDHPALHAASSQFSSLIPLYIFDSRILSRF 83
>gi|294085609|ref|YP_003552369.1| deoxyribodipyrimidine photo-lyase [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292665184|gb|ADE40285.1| Deoxyribodipyrimidine photo-lyase [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 477
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
+ +HWFR LRL DNP+L A+ + P+FI D + AG
Sbjct: 4 SIIIHWFRQDLRLADNPSLVAAAQAGDVLPLFILDDDNAG 43
>gi|157131015|ref|XP_001655778.1| DNA photolyase [Aedes aegypti]
gi|108871687|gb|EAT35912.1| AAEL011967-PA [Aedes aegypti]
Length = 820
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYP-VFIFDGETAG 50
VHWFR GLRLHDNPAL E ++V + VF+ D AG
Sbjct: 47 VHWFRKGLRLHDNPALREGLKDAVSFRCVFVIDPWFAG 84
>gi|255553063|ref|XP_002517574.1| DNA photolyase, putative [Ricinus communis]
gi|223543206|gb|EEF44738.1| DNA photolyase, putative [Ricinus communis]
Length = 537
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
++ WFR GLR+HDNPAL AS S +YPVF+ D
Sbjct: 8 SLMWFRKGLRVHDNPALDYASKGSKFVYPVFVID 41
>gi|351696947|gb|EHA99865.1| Cryptochrome-2 [Heterocephalus glaber]
Length = 593
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 20/30 (66%)
Query: 3 TPNSPNNKEVAVHWFRHGLRLHDNPALFEA 32
TP + +VHWFR GLRLHDNPAL A
Sbjct: 14 TPATGAEGACSVHWFRKGLRLHDNPALLAA 43
>gi|260800305|ref|XP_002595074.1| hypothetical protein BRAFLDRAFT_60127 [Branchiostoma floridae]
gi|229280316|gb|EEN51085.1| hypothetical protein BRAFLDRAFT_60127 [Branchiostoma floridae]
Length = 507
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
+HWFR GLR HDNP+L A S +YPV++ D
Sbjct: 10 IHWFRKGLRFHDNPSLLHALRTSRHVYPVYVVD 42
>gi|410926431|ref|XP_003976682.1| PREDICTED: cryptochrome-2-like [Takifugu rubripes]
Length = 718
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSV--LYPVFIFDGETAG 50
+VHWFR GLRLHDNPAL EA LN L ++I D AG
Sbjct: 5 SVHWFRKGLRLHDNPALQEA-LNGADSLRCIYILDPWFAG 43
>gi|283806650|ref|NP_001164572.1| chryptochrome 2-1 [Acyrthosiphon pisum]
gi|283476383|emb|CAY26039.1| chryptochrome 2-1 [Acyrthosiphon pisum]
Length = 512
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYP-VFIFDGETAG 50
VHWFR GLR+HDNP+L E +N+ + +FI D AG
Sbjct: 7 VHWFRKGLRIHDNPSLREGLINAKTFRCIFILDPWFAG 44
>gi|283806654|ref|NP_001164573.1| chryptochrome 2-2 [Acyrthosiphon pisum]
gi|283476385|emb|CAY26040.1| chryptochrome 2-2 [Acyrthosiphon pisum]
Length = 512
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYP-VFIFDGETAG 50
VHWFR GLR+HDNP+L E +N+ + +FI D AG
Sbjct: 7 VHWFRKGLRIHDNPSLREGLINAKTFRCIFILDPWFAG 44
>gi|47212597|emb|CAF93039.1| unnamed protein product [Tetraodon nigroviridis]
Length = 642
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
+VHWFR GLRLHDNPAL EA S L V++ D AG
Sbjct: 5 SVHWFRKGLRLHDNPALQEALSGADSLRCVYVLDPWFAG 43
>gi|170070074|ref|XP_001869456.1| cryptochrome 2 [Culex quinquefasciatus]
gi|167866000|gb|EDS29383.1| cryptochrome 2 [Culex quinquefasciatus]
Length = 828
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAG 50
K+ VHWFR GLRLHDNPAL E ++ L VF+ D AG
Sbjct: 47 KKHTVHWFRKGLRLHDNPALREGLKDAASLRCVFVIDPWFAG 88
>gi|223647560|gb|ACN10538.1| Cryptochrome-1 [Salmo salar]
Length = 643
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
++HWFR GLRLHDNPAL EA +S + V+ D AG
Sbjct: 5 SIHWFRKGLRLHDNPALLEAVRDSDTVRCVYFLDPWFAG 43
>gi|257359518|gb|ACV53158.1| cryptochrome-like protein [Crassostrea gigas]
Length = 393
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 20 GLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
GLRLHDNP+L + S YPVFIFDGE AG
Sbjct: 1 GLRLHDNPSLIDGLSECDRFYPVFIFDGEVAG 32
>gi|158293404|ref|XP_314748.3| AGAP008651-PA [Anopheles gambiae str. PEST]
gi|157016689|gb|EAA10141.3| AGAP008651-PA [Anopheles gambiae str. PEST]
Length = 556
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA-------SLNSVLYPVFIFD 45
+E VHWFR GLR+HDNPAL A L P+F+ D
Sbjct: 4 RETIVHWFRKGLRIHDNPALTVAVDKVRANPAKYCLRPIFVLD 46
>gi|193702257|ref|XP_001946012.1| PREDICTED: cryptochrome-1-like [Acyrthosiphon pisum]
Length = 535
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 9/53 (16%)
Query: 1 MDTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNS--------VLYPVFIFD 45
MD ++ +E VHWFR G+RLHDNPA F+ S + L P++I D
Sbjct: 1 MDKNDADVGRETTVHWFRKGMRLHDNPA-FKLSCEAKNSNGERYKLRPIYILD 52
>gi|170059953|ref|XP_001865587.1| cryptochrome-1 [Culex quinquefasciatus]
gi|167878532|gb|EDS41915.1| cryptochrome-1 [Culex quinquefasciatus]
Length = 789
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAG 50
K+ VHWFR GLRLHDNPAL E ++ L VF+ D AG
Sbjct: 49 KKHTVHWFRKGLRLHDNPALREGLKDAASLRCVFVIDPWFAG 90
>gi|410994568|gb|AFV96168.1| cryptochrome 2 [Talitrus saltator]
Length = 565
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLY-PVFIFDGETAG 50
VHWFR GLRLHDNPAL +A +N + ++I D AG
Sbjct: 54 VHWFRRGLRLHDNPALRDAIVNCETFRCIYILDPWFAG 91
>gi|77166866|gb|ABA62409.1| cryptochrome 2 [Danaus plexippus]
gi|357623166|gb|EHJ74426.1| cryptochrome 2 [Danaus plexippus]
Length = 742
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYP-VFIFD 45
VHWFR GLRLHDNPAL E +++ + VFI D
Sbjct: 32 VHWFRKGLRLHDNPALREGLVDATTFRCVFIID 64
>gi|76880306|dbj|BAE45919.1| cryptochrome [Hyla japonica]
Length = 377
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
A+HWFR GLRLHDNPAL E S + V+I D AG
Sbjct: 5 AIHWFRKGLRLHDNPALKECIQGSDTIRCVYILDPWFAG 43
>gi|95929775|ref|ZP_01312516.1| Deoxyribodipyrimidine photolyase [Desulfuromonas acetoxidans DSM
684]
gi|95134071|gb|EAT15729.1| Deoxyribodipyrimidine photolyase [Desulfuromonas acetoxidans DSM
684]
Length = 475
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 4 PNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
P++P+ + WFR LRLHDNPAL A+ + P++I D E A
Sbjct: 2 PSAPSAP--VIMWFRQDLRLHDNPALLTATRLGPVIPIYILDDEHAA 46
>gi|449436599|ref|XP_004136080.1| PREDICTED: (6-4)DNA photolyase-like [Cucumis sativus]
Length = 549
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNPAL-FEASLNSVLYPVFIFD 45
++ WFR G+R+HDNPAL + A LYPVF+ D
Sbjct: 7 SLMWFRKGIRIHDNPALEYAAKGAKFLYPVFVID 40
>gi|449491122|ref|XP_004158807.1| PREDICTED: (6-4)DNA photolyase-like [Cucumis sativus]
Length = 544
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNPAL-FEASLNSVLYPVFIFD 45
++ WFR G+R+HDNPAL + A LYPVF+ D
Sbjct: 7 SLMWFRKGIRIHDNPALEYAAKGAKFLYPVFVID 40
>gi|348558770|ref|XP_003465189.1| PREDICTED: cryptochrome-2 [Cavia porcellus]
Length = 593
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 20/30 (66%)
Query: 3 TPNSPNNKEVAVHWFRHGLRLHDNPALFEA 32
TP + +VHWFR GLRLHDNPAL A
Sbjct: 14 TPVTGAEGACSVHWFRKGLRLHDNPALLAA 43
>gi|18858467|ref|NP_571867.1| cryptochrome 2b [Danio rerio]
gi|8698590|dbj|BAA96849.1| cryptochrome 2b [Danio rerio]
Length = 638
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS--VLYPVFIFDGETAG 50
+VHWFR GLRLHDNPAL EA LN L V+ D AG
Sbjct: 5 SVHWFRKGLRLHDNPALLEA-LNGADTLRCVYFLDPWFAG 43
>gi|66910245|gb|AAH96780.1| Cry2b protein [Danio rerio]
gi|197247271|gb|AAI64795.1| Cry2b protein [Danio rerio]
Length = 639
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS--VLYPVFIFDGETAG 50
+VHWFR GLRLHDNPAL EA LN L V+ D AG
Sbjct: 5 SVHWFRKGLRLHDNPALLEA-LNGADTLRCVYFLDPWFAG 43
>gi|78217443|gb|ABB36797.1| cryptochrome 2 [Nicotiana sylvestris]
Length = 641
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ N ++PVFI+ + G F
Sbjct: 10 WFRRDLRIEDNPALAAAARNGSVFPVFIWSPKEEGQF 46
>gi|345483304|ref|XP_001606405.2| PREDICTED: cryptochrome-1 [Nasonia vitripennis]
Length = 627
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
+ K+ VHWFR GLRLHDNP+L E + S VF+ D AG
Sbjct: 60 DGKKHTVHWFRKGLRLHDNPSLREGLAGASTFRCVFVLDPWFAG 103
>gi|15824991|gb|AAL09563.1|AF363632_1 cryptochrome 1 [Coturnix japonica]
Length = 168
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALRECIRGADTVRCVYILDPWFAG 43
>gi|194332801|ref|NP_001123706.1| uncharacterized protein LOC100170456 [Xenopus (Silurana)
tropicalis]
gi|189442599|gb|AAI67313.1| LOC100170456 protein [Xenopus (Silurana) tropicalis]
Length = 557
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
+H FR GLRLHDNP L A + V+YPV+I D
Sbjct: 6 IHIFRKGLRLHDNPTLVTALETSDVVYPVYILD 38
>gi|45383636|ref|NP_989576.1| cryptochrome-1 [Gallus gallus]
gi|82104700|sp|Q8QG61.1|CRY1_CHICK RecName: Full=Cryptochrome-1
gi|19550963|gb|AAK61385.1| cryptochrome 1 [Gallus gallus]
Length = 621
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALRECIRGADTVRCVYILDPWFAG 43
>gi|327272394|ref|XP_003220970.1| PREDICTED: cryptochrome-1-like isoform 1 [Anolis carolinensis]
Length = 621
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALREVIQGADTVRCVYILDPWFAG 43
>gi|312372433|gb|EFR20390.1| hypothetical protein AND_20159 [Anopheles darlingi]
Length = 1043
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYP-VFIFDGETAG 50
VHWFR GLRLHDNPAL E + + VF+ D AG
Sbjct: 109 VHWFRKGLRLHDNPALREGVRGATSFRCVFVIDPWFAG 146
>gi|431905253|gb|ELK10298.1| Cryptochrome-1 [Pteropus alecto]
Length = 513
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|426374041|ref|XP_004053891.1| PREDICTED: cryptochrome-1 [Gorilla gorilla gorilla]
Length = 583
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|297834434|ref|XP_002885099.1| 6-4 photolyase [Arabidopsis lyrata subsp. lyrata]
gi|297330939|gb|EFH61358.1| 6-4 photolyase [Arabidopsis lyrata subsp. lyrata]
Length = 546
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPAL-FEASLNSVLYPVFIFD 45
WFR GLR+HDNPAL F + + ++PVF+ D
Sbjct: 10 WFRKGLRVHDNPALEFASKGSEFMFPVFVID 40
>gi|149067374|gb|EDM17107.1| cryptochrome 1 (photolyase-like) [Rattus norvegicus]
Length = 555
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|8698592|dbj|BAA96850.1| cryptochrome3 [Danio rerio]
Length = 598
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS--VLYPVFIFDGETAG 50
+VHWFR GLRLHDNPAL EA LN + V+I D AG
Sbjct: 5 SVHWFRKGLRLHDNPALQEA-LNGADTVRCVYILDPWFAG 43
>gi|395815587|ref|XP_003781307.1| PREDICTED: cryptochrome-2 [Otolemur garnettii]
Length = 612
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 4 PNSPNNKEVAVHWFRHGLRLHDNPALFEA 32
P + + +VHWFR GLRLHDNPAL A
Sbjct: 34 PATSADGASSVHWFRKGLRLHDNPALLAA 62
>gi|40254688|ref|NP_571861.2| cryptochrome-2 [Danio rerio]
gi|28278010|gb|AAH46088.1| Cryptochrome 3 [Danio rerio]
Length = 598
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS--VLYPVFIFDGETAG 50
+VHWFR GLRLHDNPAL EA LN + V+I D AG
Sbjct: 5 SVHWFRKGLRLHDNPALQEA-LNGADTVRCVYILDPWFAG 43
>gi|82091801|sp|Q6ZZY0.1|CRY1_SYLBO RecName: Full=Cryptochrome-1
gi|45535501|emb|CAG14931.1| cryptochrome 1 [Sylvia borin]
Length = 620
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALRECIQGADTVRCVYILDPWFAG 43
>gi|118572249|sp|Q5IZC5.2|CRY1_ERIRU RecName: Full=Cryptochrome-1
gi|57233429|gb|AAW48290.1| cryptochrome-1a [Erithacus rubecula]
Length = 620
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALRECIRGADTVRCVYILDPWFAG 43
>gi|386762985|gb|AFJ22639.1| cryptochrome 2 [Agrotis ipsilon]
Length = 812
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 7 PNNKEVAVHWFRHGLRLHDNPALFEASLNSVLYP-VFIFD 45
P K + VHWFR GLRLHDNPAL + +++ + VFI D
Sbjct: 57 PGGKHI-VHWFRKGLRLHDNPALKDGLVDAATFRCVFIID 95
>gi|380254429|dbj|BAL72539.1| cryptochrome3 [Siganus guttatus]
Length = 507
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS--VLYPVFIFDGETAG 50
+VHWFR GLRLHDNPAL EA LN + V+I D AG
Sbjct: 5 SVHWFRKGLRLHDNPALQEA-LNGADTVRCVYILDPWFAG 43
>gi|348553110|ref|XP_003462370.1| PREDICTED: cryptochrome-1-like [Cavia porcellus]
Length = 675
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIRGADTIRCVYILDPWFAG 43
>gi|417403044|gb|JAA48347.1| Putative deoxyribodipyrimidine photolyase/cryptochrome [Desmodus
rotundus]
Length = 587
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|403275987|ref|XP_003929699.1| PREDICTED: cryptochrome-1 [Saimiri boliviensis boliviensis]
Length = 586
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|296212792|ref|XP_002752992.1| PREDICTED: cryptochrome-1 [Callithrix jacchus]
Length = 586
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|291389942|ref|XP_002711467.1| PREDICTED: cryptochrome 1 (photolyase-like) [Oryctolagus
cuniculus]
Length = 587
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|6681031|ref|NP_031797.1| cryptochrome-1 [Mus musculus]
gi|81882230|sp|P97784.1|CRY1_MOUSE RecName: Full=Cryptochrome-1
gi|5081813|gb|AAD39548.1|AF156986_1 cryptochrome 1 [Mus musculus]
gi|1816439|dbj|BAA19175.1| photolyase/blue-light receptor homolog [Mus musculus]
gi|18380944|gb|AAH22174.1| Cryptochrome 1 (photolyase-like) [Mus musculus]
gi|55716088|gb|AAH85499.1| Cryptochrome 1 (photolyase-like) [Mus musculus]
gi|74194028|dbj|BAE36931.1| unnamed protein product [Mus musculus]
gi|148689469|gb|EDL21416.1| cryptochrome 1 (photolyase-like) [Mus musculus]
Length = 606
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|311255201|ref|XP_003126127.1| PREDICTED: cryptochrome-1 [Sus scrofa]
Length = 588
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|193211372|ref|NP_001123207.1| cryptochrome-1 [Ovis aries]
gi|152940829|gb|ABS44879.1| cryptochrome 1 [Ovis aries]
Length = 587
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|157427956|ref|NP_001098885.1| cryptochrome-1 [Bos taurus]
gi|157278893|gb|AAI34487.1| CRY1 protein [Bos taurus]
Length = 587
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|148226272|ref|NP_001088990.1| Cry1 protein [Xenopus laevis]
gi|49899105|gb|AAH76838.1| Cry1 protein [Xenopus laevis]
Length = 556
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
+H FR GLRLHDNP L A + ++YPV+I D
Sbjct: 6 IHIFRKGLRLHDNPTLVAALETSDIIYPVYILD 38
>gi|297692835|ref|XP_002823736.1| PREDICTED: cryptochrome-1 [Pongo abelii]
Length = 586
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|110962429|gb|ABH03083.1| cryptochrome 1b [Sylvia borin]
Length = 587
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALRECIQGADTVRCVYILDPWFAG 43
>gi|302564841|ref|NP_001181088.1| cryptochrome-1 [Macaca mulatta]
gi|402887532|ref|XP_003907145.1| PREDICTED: cryptochrome-1 [Papio anubis]
gi|355564646|gb|EHH21146.1| hypothetical protein EGK_04148 [Macaca mulatta]
gi|355786488|gb|EHH66671.1| hypothetical protein EGM_03711 [Macaca fascicularis]
gi|380809804|gb|AFE76777.1| cryptochrome-1 [Macaca mulatta]
gi|383415927|gb|AFH31177.1| cryptochrome-1 [Macaca mulatta]
gi|384945408|gb|AFI36309.1| cryptochrome-1 [Macaca mulatta]
Length = 586
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|57233431|gb|AAW48291.1| cryptochrome-1b [Erithacus rubecula]
Length = 587
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALRECIRGADTVRCVYILDPWFAG 43
>gi|75048080|sp|Q8WP19.1|CRY1_MACFA RecName: Full=Cryptochrome-1
gi|17026058|dbj|BAB72089.1| cryptochrome 1 [Macaca fascicularis]
Length = 586
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|327272396|ref|XP_003220971.1| PREDICTED: cryptochrome-1-like isoform 2 [Anolis carolinensis]
Length = 589
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALREVIQGADTVRCVYILDPWFAG 43
>gi|404312667|ref|NP_001017311.2| cryptochrome 1 (photolyase-like) [Xenopus (Silurana) tropicalis]
gi|170287804|gb|AAI61038.1| Unknown (protein for MGC:184712) [Xenopus (Silurana) tropicalis]
Length = 618
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALRECIQGADTIRCVYILDPWFAG 43
>gi|84502965|ref|ZP_01001067.1| deoxyribodipyrimidine photolyase [Oceanicola batsensis HTCC2597]
gi|84388710|gb|EAQ01581.1| deoxyribodipyrimidine photolyase [Oceanicola batsensis HTCC2597]
Length = 472
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGL 51
WFR LRL D+PAL +A+ + PVFI D AGL
Sbjct: 11 WFRRDLRLSDHPALTQAAARGPVIPVFIHDDSVAGL 46
>gi|4758072|ref|NP_004066.1| cryptochrome-1 [Homo sapiens]
gi|332241714|ref|XP_003270025.1| PREDICTED: cryptochrome-1 [Nomascus leucogenys]
gi|74735764|sp|Q16526.1|CRY1_HUMAN RecName: Full=Cryptochrome-1
gi|1304107|dbj|BAA12068.1| photolyase [Homo sapiens]
gi|1313902|dbj|BAA12710.1| photolyase homolog [Homo sapiens]
gi|22539647|gb|AAH30519.1| Cryptochrome 1 (photolyase-like) [Homo sapiens]
gi|119618201|gb|EAW97795.1| cryptochrome 1 (photolyase-like), isoform CRA_a [Homo sapiens]
gi|119618203|gb|EAW97797.1| cryptochrome 1 (photolyase-like), isoform CRA_a [Homo sapiens]
gi|121647009|gb|ABM64209.1| photolyase-like cryptochrome 1 [Homo sapiens]
gi|158254536|dbj|BAF83241.1| unnamed protein product [Homo sapiens]
gi|261858374|dbj|BAI45709.1| cryptochrome 1 [synthetic construct]
gi|325464291|gb|ADZ15916.1| cryptochrome 1 (photolyase-like) [synthetic construct]
Length = 586
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|114646730|ref|XP_509339.2| PREDICTED: cryptochrome-1 [Pan troglodytes]
gi|397525251|ref|XP_003832588.1| PREDICTED: cryptochrome-1 [Pan paniscus]
gi|410216796|gb|JAA05617.1| cryptochrome 1 (photolyase-like) [Pan troglodytes]
gi|410256668|gb|JAA16301.1| cryptochrome 1 (photolyase-like) [Pan troglodytes]
gi|410295158|gb|JAA26179.1| cryptochrome 1 (photolyase-like) [Pan troglodytes]
gi|410354849|gb|JAA44028.1| cryptochrome 1 (photolyase-like) [Pan troglodytes]
Length = 586
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|432094365|gb|ELK25942.1| Cryptochrome-1 [Myotis davidii]
Length = 535
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIRGADTIRCVYILDPWFAG 43
>gi|219116188|ref|XP_002178889.1| cry-dash from the cryptochrome/photolyase family [Phaeodactylum
tricornutum CCAP 1055/1]
gi|217409656|gb|EEC49587.1| cry-dash from the cryptochrome/photolyase family [Phaeodactylum
tricornutum CCAP 1055/1]
Length = 610
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 6 SPNNKEVAVHWFRHG-LRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
S + +V +HWFRHG LRL DNPAL +S + PVF FD G
Sbjct: 45 SRASSQVVLHWFRHGDLRLLDNPALIHSSKTAESCVPVFCFDDSVYG 91
>gi|444511893|gb|ELV09967.1| Cryptochrome-1 [Tupaia chinensis]
Length = 463
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|440907719|gb|ELR57829.1| Cryptochrome-1 [Bos grunniens mutus]
Length = 589
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|432863953|ref|XP_004070204.1| PREDICTED: cryptochrome-2-like [Oryzias latipes]
Length = 667
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 13 AVHWFRHGLRLHDNPALFEASLN--SVLYPVFIFDGETAG 50
+VHWFR GLRLHDNPAL EA LN + V+I D AG
Sbjct: 5 SVHWFRKGLRLHDNPALQEA-LNGADTVRCVYILDPWFAG 43
>gi|168002746|ref|XP_001754074.1| UVR3 AtUVR3-like 6-4 DNA photolyase protein [Physcomitrella
patens subsp. patens]
gi|162694628|gb|EDQ80975.1| UVR3 AtUVR3-like 6-4 DNA photolyase protein [Physcomitrella
patens subsp. patens]
Length = 526
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLN-SVLYPVFIFD 45
++ WFR GLRLHDNPAL + S +YPVF+ D
Sbjct: 5 SLMWFRKGLRLHDNPALLRSCEGASHVYPVFVLD 38
>gi|410965445|ref|XP_003989258.1| PREDICTED: cryptochrome-1 [Felis catus]
Length = 587
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|344266586|ref|XP_003405361.1| PREDICTED: cryptochrome-1-like [Loxodonta africana]
Length = 583
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|80861398|ref|NP_942045.2| cryptochrome-1 [Rattus norvegicus]
gi|118572250|sp|Q32Q86.1|CRY1_RAT RecName: Full=Cryptochrome-1
gi|78395116|gb|AAI07678.1| Cryptochrome 1 (photolyase-like) [Rattus norvegicus]
Length = 588
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|73969270|ref|XP_862753.1| PREDICTED: cryptochrome-1 isoform 2 [Canis lupus familiaris]
Length = 587
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|81864807|sp|Q70AD6.1|CRY1_SPAJD RecName: Full=Cryptochrome-1
gi|44843612|emb|CAE54425.1| sCRY1 protein [Spalax judaei]
Length = 587
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|395819912|ref|XP_003783322.1| PREDICTED: cryptochrome-1 [Otolemur garnettii]
Length = 587
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|302795740|ref|XP_002979633.1| hypothetical protein SELMODRAFT_233387 [Selaginella
moellendorffii]
gi|300152881|gb|EFJ19522.1| hypothetical protein SELMODRAFT_233387 [Selaginella
moellendorffii]
Length = 527
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
+A+ WFR GLRLHDNP+L A S +YPVF+ D
Sbjct: 1 MALLWFRKGLRLHDNPSLEAACHGSRNVYPVFVLD 35
>gi|149742994|ref|XP_001499263.1| PREDICTED: cryptochrome-1 [Equus caballus]
Length = 587
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|332662834|ref|YP_004445622.1| DASH family cryptochrome [Haliscomenobacter hydrossis DSM 1100]
gi|332331648|gb|AEE48749.1| cryptochrome, DASH family [Haliscomenobacter hydrossis DSM 1100]
Length = 454
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGET 48
K A+ WFR LRLHDN AL +A N+ + PVFIFD T
Sbjct: 4 KRRAIVWFRQDLRLHDNEALQDALRNAYEVIPVFIFDERT 43
>gi|410633828|ref|ZP_11344468.1| deoxyribodipyrimidine photo-lyase [Glaciecola arctica BSs20135]
gi|410146488|dbj|GAC21335.1| deoxyribodipyrimidine photo-lyase [Glaciecola arctica BSs20135]
Length = 486
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 22/31 (70%), Positives = 24/31 (77%), Gaps = 2/31 (6%)
Query: 16 WFRHGLRLHDNPAL-FEASLNSVLYPVFIFD 45
WFR LRL DNPAL F A L+SV+ PVFIFD
Sbjct: 11 WFRQDLRLRDNPALAFAAKLDSVI-PVFIFD 40
>gi|296487421|tpg|DAA29534.1| TPA: cryptochrome 1 (photolyase-like) [Bos taurus]
Length = 543
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|301784579|ref|XP_002927704.1| PREDICTED: cryptochrome-1-like [Ailuropoda melanoleuca]
gi|281347021|gb|EFB22605.1| hypothetical protein PANDA_017512 [Ailuropoda melanoleuca]
Length = 587
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL E + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAG 43
>gi|29467477|dbj|BAC67177.1| cryptochrome 2 [Armoracia rusticana]
Length = 617
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
NK+ V WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 4 NKKTIV-WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 46
>gi|348523572|ref|XP_003449297.1| PREDICTED: cryptochrome-2-like [Oreochromis niloticus]
Length = 672
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 13 AVHWFRHGLRLHDNPALFEASLN--SVLYPVFIFDGETAG 50
+VHWFR GLRLHDNPAL EA LN + V+I D AG
Sbjct: 5 SVHWFRKGLRLHDNPALQEA-LNGADAVRCVYILDPFFAG 43
>gi|347971574|ref|XP_313179.4| AGAP004261-PA [Anopheles gambiae str. PEST]
gi|347971576|ref|XP_003436763.1| AGAP004261-PB [Anopheles gambiae str. PEST]
gi|347971578|ref|XP_003436764.1| AGAP004261-PC [Anopheles gambiae str. PEST]
gi|333468729|gb|EAA44753.4| AGAP004261-PA [Anopheles gambiae str. PEST]
gi|333468730|gb|EGK97037.1| AGAP004261-PB [Anopheles gambiae str. PEST]
gi|333468731|gb|EGK97038.1| AGAP004261-PC [Anopheles gambiae str. PEST]
Length = 1056
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 22/38 (57%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYP-VFIFDGETAG 50
VHWFR GLRLHDNPAL E + + VFI D AG
Sbjct: 102 VHWFRKGLRLHDNPALREGLRGARTFRCVFIIDPWFAG 139
>gi|124007987|ref|ZP_01692687.1| deoxyribodipyrimidine photo-lyase [Microscilla marina ATCC 23134]
gi|123986571|gb|EAY26370.1| deoxyribodipyrimidine photo-lyase [Microscilla marina ATCC 23134]
Length = 447
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
+ V WFR LRLHDN L+EA N + P+FIFD
Sbjct: 4 ITVFWFRRDLRLHDNTGLYEALKNEQNVLPIFIFD 38
>gi|348529122|ref|XP_003452063.1| PREDICTED: cryptochrome-1-like [Oreochromis niloticus]
Length = 630
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
+HWFR GLRLHDNP+L E+ L + + V+I D AG
Sbjct: 6 IHWFRKGLRLHDNPSLKESLLGADTVRCVYILDPWFAG 43
>gi|328544427|ref|YP_004304536.1| deoxyribodipyrimidine photolyase family protein [Polymorphum
gilvum SL003B-26A1]
gi|326414169|gb|ADZ71232.1| Deoxyribodipyrimidine photolyase family [Polymorphum gilvum
SL003B-26A1]
Length = 480
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
WFR LR+ DNPALFEA+ + PVF+ D
Sbjct: 6 WFRQDLRIADNPALFEAAARGSVLPVFVLD 35
>gi|432943720|ref|XP_004083252.1| PREDICTED: cryptochrome-1-like [Oryzias latipes]
Length = 624
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
+HWFR GLRLHDNP+L E+ L + + V+I D AG
Sbjct: 6 IHWFRKGLRLHDNPSLKESLLGADTVRCVYILDPWFAG 43
>gi|424841446|ref|ZP_18266071.1| cryptochrome, DASH family [Saprospira grandis DSM 2844]
gi|395319644|gb|EJF52565.1| cryptochrome, DASH family [Saprospira grandis DSM 2844]
Length = 460
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 7 PNNKEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
P + + WFR LRLHDN L EA + +YPV++FD T G
Sbjct: 5 PKKAKRVIAWFRLDLRLHDNEMLTEAIKASEEVYPVYVFDERTFG 49
>gi|195433475|ref|XP_002064736.1| GK15094 [Drosophila willistoni]
gi|194160821|gb|EDW75722.1| GK15094 [Drosophila willistoni]
Length = 546
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Query: 10 KEVAVHWFRHGLRLHDNPALFE-------ASLNSVLYPVFIFD 45
K +HWFR GLR+HDNPAL + A + P+FI D
Sbjct: 6 KATLIHWFRKGLRVHDNPALMQIFTTAQAAPKKFYVRPIFILD 48
>gi|730324|sp|P40115.1|CRY1_SINAL RecName: Full=Cryptochrome-1; AltName: Full=Blue light
photoreceptor
gi|414196|emb|CAA50898.1| photolyase [Sinapis alba]
Length = 501
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
NK+ V WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 4 NKKTIV-WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 46
>gi|15341190|gb|AAK94665.1| cryptochrome 1 [Xenopus laevis]
Length = 616
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 17/19 (89%), Positives = 17/19 (89%)
Query: 13 AVHWFRHGLRLHDNPALFE 31
AVHWFR GLRLHDNPAL E
Sbjct: 5 AVHWFRKGLRLHDNPALRE 23
>gi|78191297|gb|ABB29887.1| cryptochrome 2 [Anopheles gambiae]
Length = 961
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 22/38 (57%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYP-VFIFDGETAG 50
VHWFR GLRLHDNPAL E + + VFI D AG
Sbjct: 7 VHWFRKGLRLHDNPALREGLRGARTFRCVFIIDPWFAG 44
>gi|428173312|gb|EKX42215.1| hypothetical protein GUITHDRAFT_74169 [Guillardia theta CCMP2712]
Length = 523
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 2 DTPNSPNNKEVAVHWFRHGLRLHDNPA-LFEASLNSVLYPVFI 43
D P++ +K + WFR LRLHDNPA LF A + PVF+
Sbjct: 11 DIPSAREDKRPVIVWFRQDLRLHDNPALLFAAQSGRNVIPVFV 53
>gi|29467479|dbj|BAC67178.1| cryptochrome 2 [Armoracia rusticana]
Length = 617
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
NK+ V WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 4 NKKTIV-WFRRDLRIEDNPALAAAAHQGSVFPVFIWCPEEEGQF 46
>gi|147901097|ref|NP_001081129.1| cryptochrome 1 (photolyase-like) [Xenopus laevis]
gi|47938667|gb|AAH72120.1| Cry1-A protein [Xenopus laevis]
Length = 616
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 17/19 (89%), Positives = 17/19 (89%)
Query: 13 AVHWFRHGLRLHDNPALFE 31
AVHWFR GLRLHDNPAL E
Sbjct: 5 AVHWFRKGLRLHDNPALRE 23
>gi|321471119|gb|EFX82092.1| CRY-M [Daphnia pulex]
Length = 553
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 5 NSPNNKEVAVHWFRHGLRLHDNPALFEASLNSVLYP-VFIFDGETAG 50
+ P K+V VHWFR GLRLHDNP+L + Y +FI D AG
Sbjct: 6 SEPREKQV-VHWFRKGLRLHDNPSLKDGLKGCSTYRCIFILDPWFAG 51
>gi|83764373|dbj|BAE54523.1| cryptochrome [Marchantia paleacea subsp. diptera]
gi|83764375|dbj|BAE54524.1| cryptochrome [Marchantia paleacea subsp. diptera]
Length = 696
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ ++ PVFI+ E G F
Sbjct: 8 WFRRDLRVEDNPALVAAARAGIVIPVFIWSPEEDGQF 44
>gi|156383455|ref|XP_001632849.1| predicted protein [Nematostella vectensis]
gi|156219911|gb|EDO40786.1| predicted protein [Nematostella vectensis]
Length = 513
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLN-SVLYPVFIFD 45
++HWFR LRLHDNPAL E+ N Y V+ D
Sbjct: 18 SMHWFRKDLRLHDNPALLESFKNCQAFYGVYFLD 51
>gi|33333729|gb|AAQ11980.1| cryptochrome 1 [Rattus norvegicus]
Length = 588
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 17/19 (89%), Positives = 17/19 (89%)
Query: 13 AVHWFRHGLRLHDNPALFE 31
AVHWFR GLRLHDNPAL E
Sbjct: 5 AVHWFRKGLRLHDNPALKE 23
>gi|326513908|dbj|BAJ92104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 546
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
WFR GLR+HDNPAL A ++ +YPVF+ D
Sbjct: 18 WFRKGLRVHDNPALDAARRSAARVYPVFVLD 48
>gi|118590290|ref|ZP_01547693.1| DNA photolyase [Stappia aggregata IAM 12614]
gi|118437262|gb|EAV43900.1| DNA photolyase [Stappia aggregata IAM 12614]
Length = 478
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
WFR LR+ DNPALFEA+ + + PVFI +
Sbjct: 6 WFRQDLRIKDNPALFEAAKSGRVLPVFILE 35
>gi|432862559|ref|XP_004069915.1| PREDICTED: cryptochrome-1-like [Oryzias latipes]
Length = 562
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
VHWFR GLRLHDNPAL ++ S L ++I D AG
Sbjct: 6 VHWFRKGLRLHDNPALRDSIRGSDTLRCIYILDPWFAG 43
>gi|29467481|dbj|BAC67179.1| cryptochrome 2 [Armoracia rusticana]
Length = 617
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
NK+ V WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 4 NKKTIV-WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 46
>gi|304650441|gb|ADM47404.1| cryptochrome 2 [Brassica juncea]
Length = 619
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 6 SPNNKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
S N K + WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 2 STNKKTIV--WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 46
>gi|302791750|ref|XP_002977641.1| hypothetical protein SELMODRAFT_417535 [Selaginella
moellendorffii]
gi|300154344|gb|EFJ20979.1| hypothetical protein SELMODRAFT_417535 [Selaginella
moellendorffii]
Length = 433
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
+A+ WFR GLRLHDNP+L A S +YPVF+ D
Sbjct: 1 MALLWFRKGLRLHDNPSLEAACHGSRNVYPVFVLD 35
>gi|408673564|ref|YP_006873312.1| cryptochrome, DASH family [Emticicia oligotrophica DSM 17448]
gi|387855188|gb|AFK03285.1| cryptochrome, DASH family [Emticicia oligotrophica DSM 17448]
Length = 475
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
WFR+ LRLHDN AL +A+ + PV+IFD
Sbjct: 7 WFRNDLRLHDNEALIQATKAGNVIPVYIFD 36
>gi|359073433|ref|XP_002693610.2| PREDICTED: cryptochrome-2 [Bos taurus]
Length = 591
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 21 SVHWFRKGLRLHDNPALLAA 40
>gi|30088882|gb|AAP13561.1| cryptochrome 2 [Rana catesbeiana]
Length = 543
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 8 SVHWFRKGLRLHDNPALLAA 27
>gi|307141810|gb|ADN34696.1| cryptochrome 2a [Brassica napus]
gi|327082215|gb|AEA29690.1| cryptochrome 2a [Brassica napus]
Length = 621
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 6 SPNNKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
S N K + WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 2 STNKKTIV--WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 46
>gi|254797170|ref|YP_003082010.1| deoxyribodipyrimidine photolyase [Neorickettsia risticii str.
Illinois]
gi|254590408|gb|ACT69770.1| deoxyribodipyrimidine photolyase [Neorickettsia risticii str.
Illinois]
Length = 469
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
++AV WFR R DNPALFEA+ + PV+I D
Sbjct: 5 QIAVVWFRKDFRTDDNPALFEATKIRSIIPVYIID 39
>gi|133921974|emb|CAI63876.1| cryptochrome 2 [Brassica napus]
Length = 618
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 6 SPNNKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
S N K + WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 2 STNKKTIV--WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 46
>gi|307207594|gb|EFN85258.1| Cryptochrome-1 [Harpegnathos saltator]
Length = 558
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
+ ++ VHWFR GLRLHDNP+L E + S VF+ D AG
Sbjct: 51 DGRKHTVHWFRKGLRLHDNPSLREGLAGASTFRCVFVLDPWFAG 94
>gi|194673414|ref|XP_585942.4| PREDICTED: cryptochrome-2 [Bos taurus]
gi|296479702|tpg|DAA21817.1| TPA: cryptochrome 2-like [Bos taurus]
Length = 585
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 21 SVHWFRKGLRLHDNPALLAA 40
>gi|27312016|ref|NP_034093.1| cryptochrome-2 [Mus musculus]
gi|164519087|ref|NP_001106804.1| cryptochrome-2 [Mus musculus]
gi|81882058|sp|Q9R194.1|CRY2_MOUSE RecName: Full=Cryptochrome-2
gi|5670009|gb|AAD46561.1|AF156987_1 cryptochrome 2 [Mus musculus]
gi|26334673|dbj|BAC31037.1| unnamed protein product [Mus musculus]
gi|45219826|gb|AAH66799.1| Cryptochrome 2 (photolyase-like) [Mus musculus]
gi|56078856|gb|AAH54794.1| Cryptochrome 2 (photolyase-like) [Mus musculus]
gi|74227568|dbj|BAE21836.1| unnamed protein product [Mus musculus]
gi|148695658|gb|EDL27605.1| cryptochrome 2 (photolyase-like), isoform CRA_a [Mus musculus]
gi|148695659|gb|EDL27606.1| cryptochrome 2 (photolyase-like), isoform CRA_a [Mus musculus]
Length = 592
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 23 SVHWFRKGLRLHDNPALLAA 42
>gi|344247813|gb|EGW03917.1| Cryptochrome-2 [Cricetulus griseus]
Length = 577
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 8 SVHWFRKGLRLHDNPALLAA 27
>gi|50510573|dbj|BAD32272.1| mKIAA0658 protein [Mus musculus]
Length = 584
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 15 SVHWFRKGLRLHDNPALLAA 34
>gi|159469690|ref|XP_001692996.1| CPH-like protein [Chlamydomonas reinhardtii]
gi|158277798|gb|EDP03565.1| CPH-like protein [Chlamydomonas reinhardtii]
Length = 443
Score = 41.6 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
+ A+ WFR+ LRLHDNPAL +A +S + PV++FD G
Sbjct: 42 KAALVWFRNDLRLHDNPALEQACRQSSSVLPVYVFDPRDYG 82
>gi|147903319|ref|NP_001082139.1| cryptochrome 2a [Xenopus laevis]
gi|46249526|gb|AAH68732.1| LOC398246 protein [Xenopus laevis]
Length = 568
Score = 41.6 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 13 AVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFD 45
+VHWFR GLRLHDNPAL A NSV V+I D
Sbjct: 9 SVHWFRKGLRLHDNPALLSALRGANSV-RCVYILD 42
>gi|1304062|dbj|BAA12067.1| photolyase [Drosophila melanogaster]
Length = 540
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 7/45 (15%)
Query: 8 NNKEVAVHWFRHGLRLHDNPAL---FEASLNS----VLYPVFIFD 45
+ + VHWFR GLRLHDNPAL F A+ + + P+FI D
Sbjct: 3 SQRSTLVHWFRKGLRLHDNPALSHIFTAANAAPGKYFVRPIFILD 47
>gi|17137248|ref|NP_477188.1| (6-4)-photolyase, isoform B [Drosophila melanogaster]
gi|24585455|ref|NP_724274.1| (6-4)-photolyase, isoform A [Drosophila melanogaster]
gi|442628599|ref|NP_001260632.1| (6-4)-photolyase, isoform C [Drosophila melanogaster]
gi|442628601|ref|NP_001260633.1| (6-4)-photolyase, isoform D [Drosophila melanogaster]
gi|7298691|gb|AAF53904.1| (6-4)-photolyase, isoform B [Drosophila melanogaster]
gi|22946921|gb|AAN11080.1| (6-4)-photolyase, isoform A [Drosophila melanogaster]
gi|201065459|gb|ACH92139.1| FI01404p [Drosophila melanogaster]
gi|440213996|gb|AGB93167.1| (6-4)-photolyase, isoform C [Drosophila melanogaster]
gi|440213997|gb|AGB93168.1| (6-4)-photolyase, isoform D [Drosophila melanogaster]
Length = 540
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 7/45 (15%)
Query: 8 NNKEVAVHWFRHGLRLHDNPAL---FEASLNS----VLYPVFIFD 45
+ + VHWFR GLRLHDNPAL F A+ + + P+FI D
Sbjct: 3 SQRSTLVHWFRKGLRLHDNPALSHIFTAANAAPGKYFVRPIFILD 47
>gi|29467475|dbj|BAC67176.1| cryptochrome 2 [Armoracia rusticana]
Length = 617
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
NK+ V WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 4 NKKTIV-WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 46
>gi|19528415|gb|AAL90322.1| RE11660p [Drosophila melanogaster]
Length = 540
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 7/45 (15%)
Query: 8 NNKEVAVHWFRHGLRLHDNPAL---FEASLNS----VLYPVFIFD 45
+ + VHWFR GLRLHDNPAL F A+ + + P+FI D
Sbjct: 3 SQRSTLVHWFRKGLRLHDNPALSHIFTAANAAPGRYFVRPIFILD 47
>gi|340720203|ref|XP_003398531.1| PREDICTED: cryptochrome-1-like [Bombus terrestris]
Length = 574
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYP-VFIFDGETAG 50
VHWFR GLRLHDNP+L E + + VF+ D AG
Sbjct: 24 VHWFRKGLRLHDNPSLREGLTGATTFRCVFVLDPWFAG 61
>gi|119715025|ref|YP_921990.1| deoxyribodipyrimidine photo-lyase type I [Nocardioides sp. JS614]
gi|119535686|gb|ABL80303.1| deoxyribodipyrimidine photo-lyase type I [Nocardioides sp. JS614]
Length = 453
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
AV WFR LRL DNPAL EA+ + + P+F+ D
Sbjct: 7 AVLWFRRDLRLADNPALVEAAADGPVLPLFVLD 39
>gi|426368087|ref|XP_004051044.1| PREDICTED: cryptochrome-2 isoform 1 [Gorilla gorilla gorilla]
Length = 614
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 45 SVHWFRKGLRLHDNPALLAA 64
>gi|332836250|ref|XP_001160595.2| PREDICTED: cryptochrome-2 isoform 1 [Pan troglodytes]
gi|397473567|ref|XP_003808279.1| PREDICTED: cryptochrome-2 isoform 1 [Pan paniscus]
Length = 614
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 45 SVHWFRKGLRLHDNPALLAA 64
>gi|307190470|gb|EFN74495.1| Cryptochrome-1 [Camponotus floridanus]
Length = 525
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
+ ++ VHWFR GLRLHDNP+L E + S VF+ D AG
Sbjct: 20 DGRKHTVHWFRKGLRLHDNPSLKEGLAGASTFRCVFVLDPWFAG 63
>gi|297688842|ref|XP_002821877.1| PREDICTED: cryptochrome-2 [Pongo abelii]
Length = 614
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 45 SVHWFRKGLRLHDNPALLAA 64
>gi|193211374|ref|NP_001123208.1| cryptochrome-2 [Ovis aries]
gi|156763811|gb|ABS44876.1| cryptochrome 2 [Ovis aries]
Length = 596
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 27 SVHWFRKGLRLHDNPALLAA 46
>gi|188536100|ref|NP_066940.2| cryptochrome-2 isoform 1 [Homo sapiens]
gi|194380960|dbj|BAG64048.1| unnamed protein product [Homo sapiens]
Length = 614
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 45 SVHWFRKGLRLHDNPALLAA 64
>gi|73983386|ref|XP_540761.2| PREDICTED: cryptochrome-2 [Canis lupus familiaris]
Length = 593
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 24 SVHWFRKGLRLHDNPALLAA 43
>gi|345320146|ref|XP_003430248.1| PREDICTED: cryptochrome-1-like [Ornithorhynchus anatinus]
Length = 53
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
AVHWFR GLRLHDNPAL + + + V+I D AG
Sbjct: 5 AVHWFRKGLRLHDNPALRDCVRGADTVRCVYILDPWFAG 43
>gi|409123337|ref|ZP_11222732.1| deoxyribodipyrimidine photolyase [Gillisia sp. CBA3202]
Length = 432
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGE 47
NK+V++ WFR LRL DN L EA + P+FIFD E
Sbjct: 2 NKKVSIFWFRRDLRLDDNVGLLEALKGDFPVLPIFIFDSE 41
>gi|149022681|gb|EDL79575.1| cryptochrome 2 (photolyase-like), isoform CRA_a [Rattus
norvegicus]
gi|149022682|gb|EDL79576.1| cryptochrome 2 (photolyase-like), isoform CRA_a [Rattus
norvegicus]
gi|183985822|gb|AAI66416.1| Cryptochrome 2 (photolyase-like) [Rattus norvegicus]
Length = 594
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 23 SVHWFRKGLRLHDNPALLAA 42
>gi|410973791|ref|XP_003993331.1| PREDICTED: cryptochrome-2, partial [Felis catus]
Length = 582
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 13 SVHWFRKGLRLHDNPALLAA 32
>gi|403254649|ref|XP_003920073.1| PREDICTED: cryptochrome-2 [Saimiri boliviensis boliviensis]
Length = 593
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 24 SVHWFRKGLRLHDNPALLAA 43
>gi|315439454|gb|ADU19845.1| cryptochrome 2b [Brassica napus]
gi|327082233|gb|AEA29691.1| cryptochrome 2b [Brassica napus]
Length = 575
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
N++ V WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 3 TNRKTIV-WFRRDLRIEDNPALAAAAREGSVFPVFIWCPEEEGQF 46
>gi|357139910|ref|XP_003571518.1| PREDICTED: (6-4)DNA photolyase-like [Brachypodium distachyon]
Length = 547
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
WFR GLR+HDNPAL A + +YPVF+ D
Sbjct: 19 WFRKGLRVHDNPALDAARRGAARVYPVFVLD 49
>gi|344280774|ref|XP_003412157.1| PREDICTED: cryptochrome-2 [Loxodonta africana]
Length = 593
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 24 SVHWFRKGLRLHDNPALLAA 43
>gi|311247933|ref|XP_003122883.1| PREDICTED: cryptochrome-2 isoform 1 [Sus scrofa]
Length = 594
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 25 SVHWFRKGLRLHDNPALLAA 44
>gi|296217987|ref|XP_002755255.1| PREDICTED: cryptochrome-2 isoform 1 [Callithrix jacchus]
Length = 593
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 24 SVHWFRKGLRLHDNPALLAA 43
>gi|158255956|dbj|BAF83949.1| unnamed protein product [Homo sapiens]
Length = 593
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 24 SVHWFRKGLRLHDNPALLAA 43
>gi|109106624|ref|XP_001113162.1| PREDICTED: cryptochrome-2-like [Macaca mulatta]
gi|402893708|ref|XP_003910033.1| PREDICTED: cryptochrome-2 [Papio anubis]
gi|355566579|gb|EHH22958.1| Cryptochrome-2 [Macaca mulatta]
gi|355752191|gb|EHH56311.1| Cryptochrome-2 [Macaca fascicularis]
Length = 593
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 24 SVHWFRKGLRLHDNPALLAA 43
>gi|19173768|ref|NP_596896.1| cryptochrome-2 [Rattus norvegicus]
gi|81867613|sp|Q923I8.1|CRY2_RAT RecName: Full=Cryptochrome-2
gi|15072464|gb|AAK61419.1| cryptochrome 2 [Rattus norvegicus]
Length = 594
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 23 SVHWFRKGLRLHDNPALLAA 42
>gi|118572252|sp|Q49AN0.2|CRY2_HUMAN RecName: Full=Cryptochrome-2
gi|27469701|gb|AAH41814.1| Cryptochrome 2 (photolyase-like) [Homo sapiens]
gi|119588435|gb|EAW68029.1| cryptochrome 2 (photolyase-like), isoform CRA_a [Homo sapiens]
gi|119588436|gb|EAW68030.1| cryptochrome 2 (photolyase-like), isoform CRA_a [Homo sapiens]
gi|121647012|gb|ABM64210.1| photolyase-like cryptochrome 2 [Homo sapiens]
gi|167996599|gb|ACA14134.1| growth-inhibiting protein 37 [Homo sapiens]
gi|168267486|dbj|BAG09799.1| cryptochrome-2 [synthetic construct]
gi|325463641|gb|ADZ15591.1| cryptochrome 2 (photolyase-like) [synthetic construct]
Length = 593
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 24 SVHWFRKGLRLHDNPALLAA 43
>gi|3327130|dbj|BAA31633.1| KIAA0658 protein [Homo sapiens]
Length = 589
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 20 SVHWFRKGLRLHDNPALLAA 39
>gi|380797951|gb|AFE70851.1| cryptochrome-2 isoform 1, partial [Macaca mulatta]
Length = 579
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 4 PNSPNNKEVAVHWFRHGLRLHDNPALFEA 32
P + +VHWFR GLRLHDNPAL A
Sbjct: 1 PAPGTDGASSVHWFRKGLRLHDNPALLAA 29
>gi|431915736|gb|ELK16069.1| Cryptochrome-2 [Pteropus alecto]
Length = 593
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 24 SVHWFRKGLRLHDNPALLAA 43
>gi|147901075|ref|NP_001083936.1| cryptochrome 2 (photolyase-like) [Xenopus laevis]
gi|50415857|gb|AAH77381.1| Cry2 protein [Xenopus laevis]
Length = 570
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 13 AVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFD 45
+VHWFR GLRLHDNPAL A NSV V+I D
Sbjct: 9 SVHWFRKGLRLHDNPALLAALRGANSV-RCVYILD 42
>gi|15341194|gb|AAK94667.1| cryptochrome 2b [Xenopus laevis]
Length = 570
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 13 AVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFD 45
+VHWFR GLRLHDNPAL A NSV V+I D
Sbjct: 9 SVHWFRKGLRLHDNPALLAALRGANSV-RCVYILD 42
>gi|261278636|pdb|3CVX|A Chain A, Drosophila Melanogaster (6-4) Photolyase H369m Mutant
Bound To Ds Dna With A T-T (6-4) Photolesion
Length = 543
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 7/45 (15%)
Query: 8 NNKEVAVHWFRHGLRLHDNPAL---FEASLNS----VLYPVFIFD 45
+ + VHWFR GLRLHDNPAL F A+ + + P+FI D
Sbjct: 26 SQRSTLVHWFRKGLRLHDNPALSHIFTAANAAPGRYFVRPIFILD 70
>gi|449271617|gb|EMC81901.1| Cryptochrome-1 [Columba livia]
Length = 525
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
+H FR GLRLHDNP L A +S +YPV++ D
Sbjct: 6 IHLFRKGLRLHDNPTLLAALESSETIYPVYVLD 38
>gi|384084820|ref|ZP_09995995.1| Deoxyribodipyrimidine photolyase [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 484
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDG-ETAG 50
+ + W R LRL D+PAL+EAS V+ P++I D E AG
Sbjct: 3 ITIVWLRRDLRLADHPALWEASQEGVVIPLYILDADEQAG 42
>gi|301773864|ref|XP_002922356.1| PREDICTED: cryptochrome-2-like, partial [Ailuropoda melanoleuca]
Length = 581
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 12 SVHWFRKGLRLHDNPALLAA 31
>gi|281348773|gb|EFB24357.1| hypothetical protein PANDA_011308 [Ailuropoda melanoleuca]
Length = 580
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 12 SVHWFRKGLRLHDNPALLAA 31
>gi|410634949|ref|ZP_11345574.1| deoxyribodipyrimidine photo-lyase [Glaciecola lipolytica E3]
gi|410145523|dbj|GAC12779.1| deoxyribodipyrimidine photo-lyase [Glaciecola lipolytica E3]
Length = 476
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
+K ++ WFR LRL DNPAL A N + PV+I D A F
Sbjct: 2 SKAKSIMWFRQDLRLRDNPALCAACANGDVIPVYILDEHNAQSF 45
>gi|261278633|pdb|3CVW|A Chain A, Drosophila Melanogaster (6-4) Photolyase H365n Mutant
Bound To Ds Dna With A T-T (6-4) Photolesion And
Cofactor F0
Length = 543
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 7/45 (15%)
Query: 8 NNKEVAVHWFRHGLRLHDNPAL---FEASLNS----VLYPVFIFD 45
+ + VHWFR GLRLHDNPAL F A+ + + P+FI D
Sbjct: 26 SQRSTLVHWFRKGLRLHDNPALSHIFTAANAAPGRYFVRPIFILD 70
>gi|444245671|gb|AGD94517.1| cryptochrome, partial [Solenopsis invicta]
Length = 573
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
VHWFR GLRLHDNP+L E + S VF+ D AG
Sbjct: 26 VHWFRKGLRLHDNPSLKEGLAGASTFRCVFVLDPWFAG 63
>gi|255084421|ref|XP_002508785.1| predicted protein [Micromonas sp. RCC299]
gi|226524062|gb|ACO70043.1| predicted protein [Micromonas sp. RCC299]
Length = 566
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPALFEASLN-SVLYPVFIFD 45
WFR GLR+HDNPAL +A S + PVF+ D
Sbjct: 9 WFRKGLRVHDNPALVKACEGASAVQPVFVLD 39
>gi|380017772|ref|XP_003692819.1| PREDICTED: cryptochrome-1-like [Apis florea]
Length = 571
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
VHWFR GLRLHDNP+L E + S VF+ D AG
Sbjct: 24 VHWFRKGLRLHDNPSLREGLAGASTFRCVFVLDPWFAG 61
>gi|211939158|pdb|3CVU|A Chain A, Drosophila Melanogaster (6-4) Photolyase Bound To Ds Dna
With A T-T (6-4) Photolesion
gi|211939161|pdb|3CVY|A Chain A, Drosophila Melanogaster (6-4) Photolyase Bound To
Repaired Ds Dna
gi|225697970|pdb|2WB2|A Chain A, Drosophila Melanogaster (6-4) Photolyase Bound To Double
Stranded Dna Containing A T(6-4)c Photolesion
gi|240104285|pdb|3CVV|A Chain A, Drosophila Melanogaster (6-4) Photolyase Bound To Ds Dna
With A T-T (6-4) Photolesion And F0 Cofactor
gi|289526487|pdb|2WQ6|A Chain A, Structure Of The 6-4 Photolyase Of D. Melanogaster In
Complex With The Non-Natural N4-Methyl T(Dewar)c Lesion
gi|289526490|pdb|2WQ7|A Chain A, Structure Of The 6-4 Photolyase Of D. Melanogaster In
Complex With The Non-Natural N4-Methyl T(6-4)c Lesion
Length = 543
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 7/45 (15%)
Query: 8 NNKEVAVHWFRHGLRLHDNPAL---FEASLNS----VLYPVFIFD 45
+ + VHWFR GLRLHDNPAL F A+ + + P+FI D
Sbjct: 26 SQRSTLVHWFRKGLRLHDNPALSHIFTAANAAPGRYFVRPIFILD 70
>gi|136255185|ref|NP_001077099.1| cryptochrome 2 [Apis mellifera]
gi|133754347|gb|ABO38437.1| cryptochrome 2 [Apis mellifera]
Length = 570
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
VHWFR GLRLHDNP+L E + S VF+ D AG
Sbjct: 24 VHWFRKGLRLHDNPSLREGLAGASTFRCVFVLDPWFAG 61
>gi|387015300|gb|AFJ49769.1| Cryptochrome-1-like [Crotalus adamanteus]
Length = 622
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 16/19 (84%), Positives = 17/19 (89%)
Query: 13 AVHWFRHGLRLHDNPALFE 31
+VHWFR GLRLHDNPAL E
Sbjct: 5 SVHWFRKGLRLHDNPALRE 23
>gi|356529875|ref|XP_003533512.1| PREDICTED: uncharacterized protein LOC100813721 [Glycine max]
Length = 654
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
A+ WF+H LR D+PAL AS L P+++FD
Sbjct: 7 AILWFKHDLRTDDHPALLAASAFPSLVPIYVFD 39
>gi|2073148|dbj|BAA19864.1| photolyase/blue-light receptor homolog2 [Mus musculus]
Length = 569
Score = 40.8 bits (94), Expect = 0.096, Method: Composition-based stats.
Identities = 16/19 (84%), Positives = 16/19 (84%)
Query: 14 VHWFRHGLRLHDNPALFEA 32
VHWFR GLRLHDNPAL A
Sbjct: 1 VHWFRKGLRLHDNPALLAA 19
>gi|383863231|ref|XP_003707085.1| PREDICTED: cryptochrome-1-like [Megachile rotundata]
Length = 589
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
VHWFR GLRLHDNP+L E + S VF+ D AG
Sbjct: 24 VHWFRKGLRLHDNPSLREGLAGASTFRCVFVLDPWFAG 61
>gi|222622395|gb|EEE56527.1| hypothetical protein OsJ_05816 [Oryza sativa Japonica Group]
Length = 551
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 16 WFRHGLRLHDNPALFEASLNSV---LYPVFIFD 45
WFR GLR+HDNPAL A LYPVF+ D
Sbjct: 18 WFRKGLRVHDNPALDAARRGGAVARLYPVFVLD 50
>gi|350420124|ref|XP_003492407.1| PREDICTED: cryptochrome-1 [Bombus impatiens]
gi|129593762|gb|ABO31112.1| cryptochrome 2 protein [Bombus impatiens]
Length = 574
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSVLY-PVFIFDGETAG 50
VHWFR GLRLHDNP+L E + + VF+ D AG
Sbjct: 23 TVHWFRKGLRLHDNPSLREGLTGATTFRCVFVLDPWFAG 61
>gi|156361145|ref|XP_001625380.1| predicted protein [Nematostella vectensis]
gi|156212211|gb|EDO33280.1| predicted protein [Nematostella vectensis]
Length = 463
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLN-SVLYPVFIFDGETAG 50
++HW R GLR+HDNPAL +A LN V+I D ++
Sbjct: 23 SIHWLRKGLRIHDNPALRDAVLNWGTFRVVYILDTKSVA 61
>gi|332021530|gb|EGI61895.1| Cryptochrome-1 [Acromyrmex echinatior]
Length = 671
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
VHWFR GLRLHDNP+L E + S VF+ D AG
Sbjct: 25 TVHWFRKGLRLHDNPSLKEGLAGASTFRCVFVLDPWFAG 63
>gi|156353900|ref|XP_001623146.1| predicted protein [Nematostella vectensis]
gi|156209813|gb|EDO31046.1| predicted protein [Nematostella vectensis]
Length = 541
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLN-SVLYPVFIFDGET 48
++HW R GLR+HDNPAL +A LN V+I D ++
Sbjct: 23 SIHWLRKGLRIHDNPALRDAVLNWGTFRVVYILDTKS 59
>gi|168053729|ref|XP_001779287.1| PHR2b AtPHR2-like CDP DNA photolyase [Physcomitrella patens
subsp. patens]
gi|162669299|gb|EDQ55889.1| PHR2b AtPHR2-like CDP DNA photolyase [Physcomitrella patens
subsp. patens]
Length = 435
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
+ ++ WFR+ LRLHDN AL AS +S+ + PV+ FD
Sbjct: 53 RRASIVWFRNDLRLHDNEALVSASRDSLSILPVYCFD 89
>gi|45383642|ref|NP_989575.1| cryptochrome-2 [Gallus gallus]
gi|19550965|gb|AAK61386.1| cryptochrome 2 [Gallus gallus]
Length = 582
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSV--LYPVFIFD 45
+VHWFR GLRLHDNPAL +A+L L ++I D
Sbjct: 14 SVHWFRRGLRLHDNPAL-QAALRGAASLRCIYILD 47
>gi|388457015|ref|ZP_10139310.1| deoxyribodipyrimidine photolyase [Fluoribacter dumoffii Tex-KL]
Length = 469
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETA 49
VA+ WFR+ LRL+DNPA EA S + + P++I+DG+ +
Sbjct: 3 VALVWFRYDLRLNDNPAFIEACSHHQFVIPLYIYDGKNS 41
>gi|388330328|gb|AFK29442.1| cryptochrome 2 [Arabidopsis halleri subsp. halleri]
Length = 610
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 8 WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 44
>gi|118572251|sp|Q8QG60.2|CRY2_CHICK RecName: Full=Cryptochrome-2
Length = 582
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSV--LYPVFIFD 45
+VHWFR GLRLHDNPAL +A+L L ++I D
Sbjct: 14 SVHWFRRGLRLHDNPAL-QAALRGAASLRCIYILD 47
>gi|397600433|gb|EJK57652.1| hypothetical protein THAOC_22277 [Thalassiosira oceanica]
Length = 667
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Query: 10 KEVAVHWFRHGLRLHDNPA-LFEASLN----SVLYPVFIFD 45
+ + +HWFR+ LRLHDNP L L+ S L P++IFD
Sbjct: 2 RRLNIHWFRNDLRLHDNPVDLSRHDLSDGEESTLLPIYIFD 42
>gi|18026276|gb|AAL16377.1| cryptochrome 2 [Arabidopsis thaliana]
gi|18026278|gb|AAL16378.1| cryptochrome 2 [Arabidopsis thaliana]
gi|166007539|gb|ABY77603.1| At1g04400 [Arabidopsis thaliana]
Length = 612
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 10 WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 46
>gi|15219720|ref|NP_171935.1| cryptochrome 2 [Arabidopsis thaliana]
gi|30678870|ref|NP_849588.1| cryptochrome 2 [Arabidopsis thaliana]
gi|3913379|sp|Q96524.2|CRY2_ARATH RecName: Full=Cryptochrome-2; AltName: Full=Blue light
photoreceptor
gi|1857038|gb|AAD09837.1| cryptochrome 2 apoprotein [Arabidopsis thaliana]
gi|30793901|gb|AAP40403.1| putative cryptochrome 2 apoprotein [Arabidopsis thaliana]
gi|30794033|gb|AAP40463.1| putative cryptochrome 2 apoprotein [Arabidopsis thaliana]
gi|166007535|gb|ABY77601.1| At1g04400 [Arabidopsis thaliana]
gi|166007545|gb|ABY77606.1| At1g04400 [Arabidopsis thaliana]
gi|166007549|gb|ABY77608.1| At1g04400 [Arabidopsis thaliana]
gi|166007553|gb|ABY77610.1| At1g04400 [Arabidopsis thaliana]
gi|166007559|gb|ABY77613.1| At1g04400 [Arabidopsis thaliana]
gi|166007561|gb|ABY77614.1| At1g04400 [Arabidopsis thaliana]
gi|166007563|gb|ABY77615.1| At1g04400 [Arabidopsis thaliana]
gi|166007565|gb|ABY77616.1| At1g04400 [Arabidopsis thaliana]
gi|166007569|gb|ABY77618.1| At1g04400 [Arabidopsis thaliana]
gi|166007573|gb|ABY77620.1| At1g04400 [Arabidopsis thaliana]
gi|166007575|gb|ABY77621.1| At1g04400 [Arabidopsis thaliana]
gi|166007577|gb|ABY77622.1| At1g04400 [Arabidopsis thaliana]
gi|166007579|gb|ABY77623.1| At1g04400 [Arabidopsis thaliana]
gi|166007585|gb|ABY77626.1| At1g04400 [Arabidopsis thaliana]
gi|166007589|gb|ABY77628.1| At1g04400 [Arabidopsis thaliana]
gi|166007591|gb|ABY77629.1| At1g04400 [Arabidopsis thaliana]
gi|166007597|gb|ABY77632.1| At1g04400 [Arabidopsis thaliana]
gi|332189571|gb|AEE27692.1| cryptochrome 2 [Arabidopsis thaliana]
gi|332189572|gb|AEE27693.1| cryptochrome 2 [Arabidopsis thaliana]
gi|343407880|gb|AEM06547.1| cryptochrome 2 [Arabidopsis thaliana]
gi|343407916|gb|AEM06565.1| cryptochrome 2 [Arabidopsis thaliana]
gi|343407944|gb|AEM06579.1| cryptochrome 2 [Arabidopsis thaliana]
gi|343407982|gb|AEM06598.1| cryptochrome 2 [Arabidopsis thaliana]
gi|343407992|gb|AEM06603.1| cryptochrome 2 [Arabidopsis thaliana]
gi|343408026|gb|AEM06620.1| cryptochrome 2 [Arabidopsis thaliana]
gi|343408040|gb|AEM06627.1| cryptochrome 2 [Arabidopsis thaliana]
gi|343408054|gb|AEM06634.1| cryptochrome 2 [Arabidopsis thaliana]
gi|343408110|gb|AEM06662.1| cryptochrome 2 [Arabidopsis thaliana]
gi|343408120|gb|AEM06667.1| cryptochrome 2 [Arabidopsis thaliana]
gi|343408130|gb|AEM06672.1| cryptochrome 2 [Arabidopsis thaliana]
gi|343408156|gb|AEM06685.1| cryptochrome 2 [Arabidopsis thaliana]
gi|343408222|gb|AEM06718.1| cryptochrome 2 [Arabidopsis thaliana]
Length = 612
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 10 WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 46
>gi|388330326|gb|AFK29441.1| cryptochrome 2 [Arabidopsis halleri subsp. gemmifera]
Length = 610
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 8 WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 44
>gi|18026280|gb|AAL16379.1| cryptochrome 2 [Arabidopsis thaliana]
Length = 612
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 10 WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 46
>gi|166007537|gb|ABY77602.1| At1g04400 [Arabidopsis thaliana]
gi|166007541|gb|ABY77604.1| At1g04400 [Arabidopsis thaliana]
gi|166007543|gb|ABY77605.1| At1g04400 [Arabidopsis thaliana]
gi|166007571|gb|ABY77619.1| At1g04400 [Arabidopsis thaliana]
gi|166007581|gb|ABY77624.1| At1g04400 [Arabidopsis thaliana]
gi|166007583|gb|ABY77625.1| At1g04400 [Arabidopsis thaliana]
gi|166007587|gb|ABY77627.1| At1g04400 [Arabidopsis thaliana]
gi|166007593|gb|ABY77630.1| At1g04400 [Arabidopsis thaliana]
gi|166007595|gb|ABY77631.1| At1g04400 [Arabidopsis thaliana]
Length = 612
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 10 WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 46
>gi|50659744|gb|AAT80618.1| cryptochrome 2 [Arabidopsis thaliana]
Length = 610
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 8 WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 44
>gi|50659704|gb|AAT80598.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659706|gb|AAT80599.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659708|gb|AAT80600.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659710|gb|AAT80601.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659712|gb|AAT80602.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659714|gb|AAT80603.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659716|gb|AAT80604.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659718|gb|AAT80605.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659720|gb|AAT80606.1| cryptochrome 2 [Arabidopsis thaliana]
Length = 610
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 8 WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 44
>gi|1514443|emb|CAA67508.1| blue light receptor [Arabidopsis thaliana]
Length = 612
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 10 WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 46
>gi|1468977|gb|AAB04997.1| AT-PHH1 [Arabidopsis thaliana]
Length = 612
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 10 WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 46
>gi|1468975|gb|AAB04996.1| AT-PHH1 [Arabidopsis thaliana]
Length = 612
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 10 WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 46
>gi|2341035|gb|AAB70435.1| Match to Arabidopsis photolysase (PHH1) gene (gb|X99061) and
cryptochrome 2 apoprotein (CRY2) (gb|U43397). ESTs
gb|W43661 and gb|Z25638 come from this gene
[Arabidopsis thaliana]
gi|50659694|gb|AAT80593.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659696|gb|AAT80594.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659698|gb|AAT80595.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659700|gb|AAT80596.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659702|gb|AAT80597.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659722|gb|AAT80607.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659724|gb|AAT80608.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659726|gb|AAT80609.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659728|gb|AAT80610.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659730|gb|AAT80611.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659732|gb|AAT80612.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659734|gb|AAT80613.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659736|gb|AAT80614.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659738|gb|AAT80615.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659740|gb|AAT80616.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659742|gb|AAT80617.1| cryptochrome 2 [Arabidopsis thaliana]
Length = 610
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 8 WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 44
>gi|166007547|gb|ABY77607.1| At1g04400 [Arabidopsis thaliana]
gi|166007551|gb|ABY77609.1| At1g04400 [Arabidopsis thaliana]
gi|166007555|gb|ABY77611.1| At1g04400 [Arabidopsis thaliana]
gi|166007557|gb|ABY77612.1| At1g04400 [Arabidopsis thaliana]
gi|166007567|gb|ABY77617.1| At1g04400 [Arabidopsis thaliana]
gi|343407876|gb|AEM06545.1| cryptochrome 2 [Arabidopsis thaliana]
gi|343407912|gb|AEM06563.1| cryptochrome 2 [Arabidopsis thaliana]
gi|343407950|gb|AEM06582.1| cryptochrome 2 [Arabidopsis thaliana]
gi|343408064|gb|AEM06639.1| cryptochrome 2 [Arabidopsis thaliana]
gi|343408220|gb|AEM06717.1| cryptochrome 2 [Arabidopsis thaliana]
Length = 612
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 10 WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 46
>gi|50659746|gb|AAT80619.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659748|gb|AAT80620.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659750|gb|AAT80621.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659752|gb|AAT80622.1| cryptochrome 2 [Arabidopsis thaliana]
gi|50659754|gb|AAT80623.1| cryptochrome 2 [Arabidopsis thaliana]
Length = 610
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 8 WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 44
>gi|325105098|ref|YP_004274752.1| DASH family cryptochrome [Pedobacter saltans DSM 12145]
gi|324973946|gb|ADY52930.1| cryptochrome, DASH family [Pedobacter saltans DSM 12145]
Length = 433
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
WFR+ LR+HDN L EA+L S + PV+IFD
Sbjct: 9 WFRNDLRIHDNEILIEATLKSTEIVPVYIFD 39
>gi|350536405|ref|NP_001234245.1| cryptochrome 2 [Solanum lycopersicum]
gi|8101444|gb|AAF72556.1|AF130425_1 cryptochrome 2 [Solanum lycopersicum]
gi|8101446|gb|AAF72557.1|AF130426_1 cryptochrome 2 [Solanum lycopersicum]
Length = 635
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
+ WFR LR+ DNPAL A+ N + PVFI+ + G F
Sbjct: 7 TIVWFRRDLRIEDNPALAAAARNGSVLPVFIWCPKEEGQF 46
>gi|388330322|gb|AFK29439.1| cryptochrome 2 [Arabidopsis kamchatica]
Length = 610
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 8 WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 44
>gi|348517126|ref|XP_003446086.1| PREDICTED: cryptochrome-1-like [Oreochromis niloticus]
Length = 800
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/20 (80%), Positives = 18/20 (90%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
++HWFR GLRLHDNPAL EA
Sbjct: 5 SIHWFRKGLRLHDNPALREA 24
>gi|432959668|ref|XP_004086356.1| PREDICTED: cryptochrome-1-like [Oryzias latipes]
Length = 653
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/20 (80%), Positives = 18/20 (90%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
++HWFR GLRLHDNPAL EA
Sbjct: 5 SIHWFRKGLRLHDNPALREA 24
>gi|388330324|gb|AFK29440.1| cryptochrome 2 [Arabidopsis lyrata subsp. lyrata]
Length = 610
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 8 WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 44
>gi|297848668|ref|XP_002892215.1| hypothetical protein ARALYDRAFT_470417 [Arabidopsis lyrata subsp.
lyrata]
gi|297338057|gb|EFH68474.1| hypothetical protein ARALYDRAFT_470417 [Arabidopsis lyrata subsp.
lyrata]
Length = 612
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ ++PVFI+ E G F
Sbjct: 10 WFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQF 46
>gi|195484786|ref|XP_002090823.1| GE12583 [Drosophila yakuba]
gi|194176924|gb|EDW90535.1| GE12583 [Drosophila yakuba]
Length = 540
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 7/43 (16%)
Query: 10 KEVAVHWFRHGLRLHDNPALFE--ASLNSV-----LYPVFIFD 45
+ VHWFR GLR+HDNPAL + ++ N+ + P+FI D
Sbjct: 5 RSTLVHWFRKGLRVHDNPALSQIFSAANAAPGKYFVRPIFILD 47
>gi|63100688|gb|AAH95305.1| Cry2a protein [Danio rerio]
Length = 658
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/20 (80%), Positives = 18/20 (90%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
++HWFR GLRLHDNPAL EA
Sbjct: 5 SIHWFRKGLRLHDNPALQEA 24
>gi|18858465|ref|NP_571866.1| cryptochrome-1 [Danio rerio]
gi|8698588|dbj|BAA96848.1| cryptochrome 2a [Danio rerio]
Length = 655
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/20 (80%), Positives = 18/20 (90%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
++HWFR GLRLHDNPAL EA
Sbjct: 5 SIHWFRKGLRLHDNPALQEA 24
>gi|383783458|ref|YP_005468024.1| deoxyribodipyrimidine photo-lyase family protein [Leptospirillum
ferrooxidans C2-3]
gi|383082367|dbj|BAM05894.1| putative deoxyribodipyrimidine photo-lyase family protein
[Leptospirillum ferrooxidans C2-3]
Length = 483
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
++ WFR LRL DNPALF ++ + + PV+I+D
Sbjct: 3 TSIVWFRKDLRLKDNPALFHSARSGPILPVYIWD 36
>gi|399220399|gb|AFP33463.1| cryptochrome 2 [Dicentrarchus labrax]
Length = 668
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/20 (80%), Positives = 18/20 (90%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
++HWFR GLRLHDNPAL EA
Sbjct: 5 SIHWFRKGLRLHDNPALQEA 24
>gi|429544803|gb|AGA01579.1| cryptochrome 2 [Rhyparobia maderae]
Length = 586
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 1 MDTPNSPNNKEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
M SP + VHWFR GLRLHDNP+L E VFI D AG
Sbjct: 1 MSLEKSPKH---TVHWFRKGLRLHDNPSLREGLKCAKTFRCVFILDPWFAG 48
>gi|381394101|ref|ZP_09919819.1| deoxyribodipyrimidine photo-lyase [Glaciecola punicea DSM 14233 =
ACAM 611]
gi|379330373|dbj|GAB54952.1| deoxyribodipyrimidine photo-lyase [Glaciecola punicea DSM 14233 =
ACAM 611]
Length = 469
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
WFR LR+ DNPAL +A+ S + PV+I+D
Sbjct: 2 WFRQDLRVKDNPALIKAAKQSKVLPVYIYD 31
>gi|448611990|ref|ZP_21662420.1| deoxyribodipyrimidine photolyase [Haloferax mucosum ATCC
BAA-1512]
gi|445742751|gb|ELZ94245.1| deoxyribodipyrimidine photolyase [Haloferax mucosum ATCC
BAA-1512]
Length = 486
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
+++ WFR LRLHDN AL EA + PV+ FD
Sbjct: 5 ISLVWFRRDLRLHDNEALVEACAADRVVPVYCFD 38
>gi|40644276|emb|CAD35495.1| cryptochrome 2 [Oryza sativa Indica Group]
Length = 651
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
E V WFR LR+ DNPAL A+ + V+ PVFI+ G F
Sbjct: 5 ERTVVWFRRDLRIDDNPALAAAARDGVVLPVFIWCPADEGQF 46
>gi|452822749|gb|EME29765.1| deoxyribodipyrimidine photo-lyase [Galdieria sulphuraria]
Length = 545
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
WFR LRLHDNP L A L S L+P+FI D
Sbjct: 58 WFRKSLRLHDNPTLQRAVQLASELFPLFILD 88
>gi|23954324|emb|CAC82538.1| Cryptochrome 2 [Oryza sativa Indica Group]
Length = 651
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
E V WFR LR+ DNPAL A+ + V+ PVFI+ G F
Sbjct: 5 ERTVVWFRRDLRIDDNPALAAAARDGVVLPVFIWCPADEGQF 46
>gi|115528160|gb|AAI24763.1| Cryptochrome 1a [Danio rerio]
Length = 619
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
VHWFR GLRLHDNP+L ++ L + + V+I D AG
Sbjct: 6 VHWFRKGLRLHDNPSLRDSILGAHSVRCVYILDPWFAG 43
>gi|390979651|ref|NP_001070765.2| cryptochrome 1a [Danio rerio]
gi|141796163|gb|AAI34839.1| Cry1a protein [Danio rerio]
gi|190337408|gb|AAI63354.1| Cryptochrome 1a [Danio rerio]
Length = 619
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
VHWFR GLRLHDNP+L ++ L + + V+I D AG
Sbjct: 6 VHWFRKGLRLHDNPSLRDSILGAHSVRCVYILDPWFAG 43
>gi|8698584|dbj|BAA96846.1| cryptochrome 1a [Danio rerio]
Length = 556
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
VHWFR GLRLHDNP+L ++ L + + V+I D AG
Sbjct: 6 VHWFRKGLRLHDNPSLRDSILGAHSVRCVYILDPWFAG 43
>gi|387015302|gb|AFJ49770.1| Cryptochrome-2-like [Crotalus adamanteus]
Length = 590
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 13 AVHWFRHGLRLHDNPAL 29
+VHWFR GLRLHDNPAL
Sbjct: 19 SVHWFRRGLRLHDNPAL 35
>gi|291290513|dbj|BAI82612.1| cryptochrome 2 [Xenopus (Silurana) tropicalis]
Length = 557
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNPAL A
Sbjct: 3 SVHWFRKGLRLHDNPALSAA 22
>gi|194759941|ref|XP_001962202.1| GF14557 [Drosophila ananassae]
gi|190615899|gb|EDV31423.1| GF14557 [Drosophila ananassae]
Length = 539
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Query: 14 VHWFRHGLRLHDNPALFE-------ASLNSVLYPVFIFD 45
VHWFR GLR+HDNPAL + A + P+FI D
Sbjct: 9 VHWFRKGLRVHDNPALSQIFKVANTAPGKYFVRPIFILD 47
>gi|134032019|ref|NP_001076794.1| cryptochrome 2 [Tribolium castaneum]
gi|133754349|gb|ABO38438.1| cryptochrome 2 [Tribolium castaneum]
gi|270008089|gb|EFA04537.1| cryptochrome 2 [Tribolium castaneum]
Length = 535
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYP-VFIFDGETAG 50
VHWFR GLRLHDNP+L E + + VF+ D AG
Sbjct: 20 VHWFRRGLRLHDNPSLREGLKGARTFRCVFVLDPWFAG 57
>gi|224112573|ref|XP_002332746.1| predicted protein [Populus trichocarpa]
gi|222833074|gb|EEE71551.1| predicted protein [Populus trichocarpa]
Length = 646
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
++ + WFR LR+ DNPAL A+ + ++PVFI+ + G F
Sbjct: 2 DRSKTIVWFRRDLRIEDNPALAAAARDGCVFPVFIWCPKEEGQF 45
>gi|125986217|ref|XP_001356872.1| GA15376 [Drosophila pseudoobscura pseudoobscura]
gi|54645198|gb|EAL33938.1| GA15376 [Drosophila pseudoobscura pseudoobscura]
Length = 533
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
Query: 14 VHWFRHGLRLHDNPALFE--ASLNSV-----LYPVFIFD 45
VHWFR GLR+HDNPAL + ++ N+ + P+FI D
Sbjct: 9 VHWFRKGLRVHDNPALTQIFSAANAAPEKFHVRPIFILD 47
>gi|340356010|ref|ZP_08678676.1| deoxyribodipyrimidine photolyase [Sporosarcina newyorkensis 2681]
gi|339621805|gb|EGQ26346.1| deoxyribodipyrimidine photolyase [Sporosarcina newyorkensis 2681]
Length = 470
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIF 44
WFR LRLHD+PAL EA+ + + PVFI
Sbjct: 7 WFRKDLRLHDHPALVEAAAHGEVVPVFIL 35
>gi|327259731|ref|XP_003214689.1| PREDICTED: cryptochrome-2-like [Anolis carolinensis]
Length = 586
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 13 AVHWFRHGLRLHDNPAL 29
+VHWFR GLRLHDNPAL
Sbjct: 12 SVHWFRRGLRLHDNPAL 28
>gi|402076336|gb|EJT71759.1| cryptochrome-1 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 661
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 30/40 (75%), Gaps = 4/40 (10%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
+K ++WFR LRLHD+PAL +A+L+ +VL+P+F +D
Sbjct: 2 SKARVIYWFRTDLRLHDSPAL-QAALDLDPAVLWPIFTWD 40
>gi|403373370|gb|EJY86604.1| Cryptochrome 5 [Oxytricha trifallax]
Length = 570
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
+K++ ++WFR LRLHDN L ++S L P+FI D
Sbjct: 5 SKKLNIYWFRKALRLHDNKGLIDSSSTCTNLLPIFILD 42
>gi|327342154|gb|AEA50864.1| cry2-2 [Populus tremula]
Length = 177
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
++ + WFR LR+ DNPAL A+ + ++PVFI+ + G F
Sbjct: 2 DRSKTIVWFRRDLRIEDNPALAAAARDGCVFPVFIWCPKEEGQF 45
>gi|195995781|ref|XP_002107759.1| hypothetical protein TRIADDRAFT_18352 [Trichoplax adhaerens]
gi|190588535|gb|EDV28557.1| hypothetical protein TRIADDRAFT_18352 [Trichoplax adhaerens]
Length = 503
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
W R LRL DNPALF A+ L V+IFD + +G
Sbjct: 12 WLRQDLRLIDNPALFHAAKRGQLITVYIFDEDCSG 46
>gi|392587897|gb|EIW77230.1| hypothetical protein CONPUDRAFT_129501 [Coniophora puteana
RWD-64-598 SS2]
Length = 658
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 27/36 (75%), Gaps = 2/36 (5%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLN-SVLYPVFIFDGE 47
++WFR LR+HD+PAL A +LN VLYPV+ +D E
Sbjct: 8 LYWFRTDLRVHDSPALHAALALNPEVLYPVWTWDPE 43
>gi|44843614|emb|CAE54426.1| sCRY2S protein [Spalax judaei]
Length = 591
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 15/20 (75%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNP+L A
Sbjct: 22 SVHWFRKGLRLHDNPSLLAA 41
>gi|44843616|emb|CAE54427.1| sCRY2L protein [Spalax judaei]
Length = 606
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 15/20 (75%), Positives = 17/20 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEA 32
+VHWFR GLRLHDNP+L A
Sbjct: 37 SVHWFRKGLRLHDNPSLLAA 56
>gi|348519202|ref|XP_003447120.1| PREDICTED: cryptochrome-1-like [Oreochromis niloticus]
Length = 570
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
+HWFR GLRLHDNP+L ++ S L ++I D AG
Sbjct: 5 TIHWFRKGLRLHDNPSLKDSIRGSDTLRCIYILDPWFAG 43
>gi|346324524|gb|EGX94121.1| cryptochrome-2 [Cordyceps militaris CM01]
Length = 902
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
K ++WFR LRLHD+PAL +A+L+ VL+P+F +D
Sbjct: 3 KSRVIYWFRTDLRLHDSPAL-KAALDLDPEVLWPIFTWD 40
>gi|195995819|ref|XP_002107778.1| hypothetical protein TRIADDRAFT_19715 [Trichoplax adhaerens]
gi|190588554|gb|EDV28576.1| hypothetical protein TRIADDRAFT_19715, partial [Trichoplax
adhaerens]
Length = 384
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
W R LRL DNPALF A+ L V+IFD + +G
Sbjct: 11 WLRRDLRLIDNPALFHAAKRGQLITVYIFDEDCSG 45
>gi|194878837|ref|XP_001974136.1| GG21562 [Drosophila erecta]
gi|190657323|gb|EDV54536.1| GG21562 [Drosophila erecta]
Length = 540
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 7/43 (16%)
Query: 10 KEVAVHWFRHGLRLHDNPAL---FEASLNS----VLYPVFIFD 45
+ VHWFR GLR+HDNPAL F A+ + + P+FI D
Sbjct: 5 RSTLVHWFRKGLRVHDNPALSHIFSAANAAPGKYFVRPIFILD 47
>gi|380254427|dbj|BAL72538.1| cryptochrome1 [Siganus guttatus]
Length = 581
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
+HWFR GLRLHDNPAL ++ + L ++I D AG
Sbjct: 6 IHWFRKGLRLHDNPALRDSIRGADTLRCIYILDPWFAG 43
>gi|195148597|ref|XP_002015257.1| GL19602 [Drosophila persimilis]
gi|194107210|gb|EDW29253.1| GL19602 [Drosophila persimilis]
Length = 204
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
Query: 14 VHWFRHGLRLHDNPALFE--ASLNSV-----LYPVFIFD 45
VHWFR GLR+HDNPAL + ++ N+ + P+FI D
Sbjct: 9 VHWFRKGLRVHDNPALTQIFSAANAAPEKFHVRPIFILD 47
>gi|195351886|ref|XP_002042448.1| GM23319 [Drosophila sechellia]
gi|194124317|gb|EDW46360.1| GM23319 [Drosophila sechellia]
Length = 540
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 7/43 (16%)
Query: 10 KEVAVHWFRHGLRLHDNPAL---FEASLNS----VLYPVFIFD 45
+ VHWFR GLR+HDNPAL F A+ + + P+FI D
Sbjct: 5 RSTLVHWFRKGLRVHDNPALSHIFTAANAAPGKYFVRPIFILD 47
>gi|195580452|ref|XP_002080051.1| GD21692 [Drosophila simulans]
gi|194192060|gb|EDX05636.1| GD21692 [Drosophila simulans]
Length = 540
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 7/43 (16%)
Query: 10 KEVAVHWFRHGLRLHDNPAL---FEASLNS----VLYPVFIFD 45
+ VHWFR GLR+HDNPAL F A+ + + P+FI D
Sbjct: 5 RSTLVHWFRKGLRVHDNPALSHIFTAANAAPGKYFVRPIFILD 47
>gi|388494660|gb|AFK35396.1| unknown [Medicago truncatula]
Length = 456
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Query: 4 PNSPNN----KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
PN P++ + A+ WFR+ LR+HDN AL A+ S+ + PV+ FD
Sbjct: 107 PNDPSSAAALRRTAIVWFRNDLRVHDNEALNTANNESISVLPVYCFD 153
>gi|324103935|gb|ADY17887.1| cryptochrome [Spodoptera exigua]
gi|324103937|gb|ADY17888.1| cryptochrome [Spodoptera exigua]
Length = 548
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 13 AVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFDGETAG 50
+V WFRHGLRLHDNP+L A +P+FIFDGETAG
Sbjct: 5 SVLWFRHGLRLHDNPSLHSALEEKGFPFFPIFIFDGETAG 44
>gi|307826658|gb|ADN94464.1| cryptochrome [Helicoverpa armigera]
Length = 548
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 13 AVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFDGETAG 50
+V WFRHGLRLHDNP+L A +P+FIFDGETAG
Sbjct: 5 SVLWFRHGLRLHDNPSLHSALEEKGFPFFPIFIFDGETAG 44
>gi|357442473|ref|XP_003591514.1| DNA photolyase protein [Medicago truncatula]
gi|355480562|gb|AES61765.1| DNA photolyase protein [Medicago truncatula]
Length = 456
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Query: 4 PNSPNN----KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
PN P++ + A+ WFR+ LR+HDN AL A+ S+ + PV+ FD
Sbjct: 107 PNDPSSAAALRRTAIVWFRNDLRVHDNEALNTANNESISVLPVYCFD 153
>gi|390355184|ref|XP_785873.3| PREDICTED: cryptochrome-1-like [Strongylocentrotus purpuratus]
Length = 754
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 16/19 (84%), Positives = 16/19 (84%)
Query: 14 VHWFRHGLRLHDNPALFEA 32
VHWFR GLRLHDNPAL E
Sbjct: 21 VHWFRKGLRLHDNPALKEG 39
>gi|338210905|ref|YP_004654954.1| deoxyribodipyrimidine photo-lyase [Runella slithyformis DSM
19594]
gi|336304720|gb|AEI47822.1| Deoxyribodipyrimidine photo-lyase [Runella slithyformis DSM
19594]
Length = 436
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 22/38 (57%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 12 VAVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFDGE 47
+ + WFR LRLHDN L+ A S N VL PVFIFD E
Sbjct: 5 LTLFWFRRDLRLHDNAGLYHALKSGNPVL-PVFIFDTE 41
>gi|326437928|gb|EGD83498.1| DNA photolyase [Salpingoeca sp. ATCC 50818]
Length = 540
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
V++HWFR GLRLHDN AL A + +YPVF+ D
Sbjct: 6 VSIHWFRKGLRLHDNAALLAALKGAKQVYPVFVLD 40
>gi|195995779|ref|XP_002107758.1| hypothetical protein TRIADDRAFT_51591 [Trichoplax adhaerens]
gi|190588534|gb|EDV28556.1| hypothetical protein TRIADDRAFT_51591 [Trichoplax adhaerens]
Length = 513
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
W R LRL DNPALF A+ L V+IFD + +G
Sbjct: 12 WLRRDLRLIDNPALFHAAKRGQLITVYIFDEDCSG 46
>gi|381185982|ref|ZP_09893558.1| deoxyribodipyrimidine photo-lyase [Flavobacterium frigoris PS1]
gi|379652014|gb|EIA10573.1| deoxyribodipyrimidine photo-lyase [Flavobacterium frigoris PS1]
Length = 431
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
N +EV WFR LRL DN LF+A N + P+F+FD
Sbjct: 2 NKQEVTFFWFRRDLRLDDNVGLFQALQSNYPVIPLFVFD 40
>gi|371574660|gb|AEX49898.1| cryptochrome 1 [Helicoverpa armigera]
Length = 528
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 13 AVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFDGETAG 50
+V WFRHGLRLHDNP+L A +P+FIFDGETAG
Sbjct: 5 SVLWFRHGLRLHDNPSLHSALEEKGFPFFPIFIFDGETAG 44
>gi|350563314|ref|ZP_08932136.1| DNA photolyase FAD-binding [Thioalkalimicrobium aerophilum AL3]
gi|349779178|gb|EGZ33525.1| DNA photolyase FAD-binding [Thioalkalimicrobium aerophilum AL3]
Length = 523
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 1 MDTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
MD P + + V + WF+ LR+HD+ L+ A+ + PV++F+
Sbjct: 1 MDRPANQSKPRVQLVWFKRDLRIHDHAPLYFAAQQGAVLPVYVFE 45
>gi|47218319|emb|CAG04151.1| unnamed protein product [Tetraodon nigroviridis]
Length = 625
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
+HWFR GLRLHDNP+L ++ L + + V+I D AG
Sbjct: 6 IHWFRKGLRLHDNPSLKDSLLGADSVRCVYILDPWFAG 43
>gi|302915963|ref|XP_003051792.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732731|gb|EEU46079.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 639
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 29/39 (74%), Gaps = 4/39 (10%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
K ++WFR LRLHD+PAL +A+L+ +VL+P+F +D
Sbjct: 3 KPRVIYWFRTDLRLHDSPAL-KAALDLDPAVLWPIFTWD 40
>gi|45935260|gb|AAS79665.1| cryptochrome 2A apoprotein [Pisum sativum]
gi|45935262|gb|AAS79666.1| cryptochrome 2A apoprotein [Pisum sativum]
Length = 629
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ + ++PVFI+ + G F
Sbjct: 9 WFRRDLRIEDNPALAAAARDGSVFPVFIWCPKEEGQF 45
>gi|456063890|ref|YP_007502860.1| Deoxyribodipyrimidine photo-lyase [beta proteobacterium CB]
gi|455441187|gb|AGG34125.1| Deoxyribodipyrimidine photo-lyase [beta proteobacterium CB]
Length = 418
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
++WFR+ LRL DNPA +A LN+ L PV++ D
Sbjct: 5 IYWFRNDLRLADNPAFTQACLNADYLLPVYVHD 37
>gi|397662777|ref|YP_006504315.1| deoxyribodipyrimidine photo-lyase [Legionella pneumophila subsp.
pneumophila]
gi|395126188|emb|CCD04368.1| Deoxyribodipyrimidine photo-lyase [Legionella pneumophila subsp.
pneumophila]
Length = 471
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAGL 51
+A+ WFR LRL DNPA EA S + ++ P++I+D + + L
Sbjct: 3 IALMWFRQDLRLTDNPAFIEACSHHDIVIPLYIYDDKCSVL 43
>gi|389622365|ref|XP_003708836.1| cryptochrome-1 [Magnaporthe oryzae 70-15]
gi|351648365|gb|EHA56224.1| cryptochrome-1 [Magnaporthe oryzae 70-15]
gi|440473506|gb|ELQ42297.1| cryptochrome-1 [Magnaporthe oryzae Y34]
gi|440489726|gb|ELQ69353.1| cryptochrome-1 [Magnaporthe oryzae P131]
Length = 679
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 28/35 (80%), Gaps = 4/35 (11%)
Query: 14 VHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
++WFR LRLHD+PAL +A+L+ +VL+P+F +D
Sbjct: 7 IYWFRTDLRLHDSPAL-QAALDLDPAVLWPIFTWD 40
>gi|412988942|emb|CCO15533.1| predicted protein [Bathycoccus prasinos]
Length = 574
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 10/48 (20%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEASLNS----------VLYPVFIFD 45
N ++ WFR GLR+HDNPAL EA +++ + P+FI D
Sbjct: 3 NEATTSIVWFRKGLRIHDNPALSEALIDAKNFGGGDESKKVLPLFILD 50
>gi|37725009|gb|AAO23971.1| cryptochrome 2A [Pisum sativum]
Length = 375
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
+ WFR LR+ DNPAL A+ + ++PVFI+ + G F
Sbjct: 6 TIVWFRRDLRIEDNPALAAAARDGSVFPVFIWCPKEEGQF 45
>gi|322698418|gb|EFY90188.1| cryptochrome-2 [Metarhizium acridum CQMa 102]
Length = 604
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
K V+WFR LRLHD+PAL +A+L+ VL+P+F +D
Sbjct: 3 KPRVVYWFRTDLRLHDSPAL-KAALDLEPDVLWPIFTWD 40
>gi|145881071|gb|ABP97099.1| cryptochrome CRY2 [Acropora millepora]
Length = 520
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIF 44
++HWFR LRLHDNP+L E NS V Y V+
Sbjct: 20 SLHWFRKDLRLHDNPSLRECLRNSKVFYGVYFL 52
>gi|296283766|ref|ZP_06861764.1| deoxyribodipyrimidine photolyase [Citromicrobium bathyomarinum
JL354]
Length = 467
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
W R LRL DNPAL+ A+ + PVF+ D E G
Sbjct: 8 WLRRDLRLADNPALYAAAQAGPIIPVFVLDDERTG 42
>gi|37725011|gb|AAO23972.1| cryptochrome 2B [Pisum sativum]
Length = 597
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ + ++PVFI+ + G F
Sbjct: 9 WFRRDLRIEDNPALAAAARDGSVFPVFIWCPKEEGQF 45
>gi|46390519|dbj|BAD16007.1| putative 6-4 photolyase (UVR3) [Oryza sativa Japonica Group]
gi|51536259|dbj|BAD38427.1| putative 6-4 photolyase (UVR3) [Oryza sativa Japonica Group]
Length = 560
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 16 WFRHGLRLHDNPAL---FEASLNSVLYPVFIFD 45
WFR GLR+HDNPAL + LYPVF+ D
Sbjct: 18 WFRKGLRVHDNPALDAARRGGAAARLYPVFVLD 50
>gi|297598791|ref|NP_001046243.2| Os02g0204400 [Oryza sativa Japonica Group]
gi|306756329|sp|Q0E2Y1.1|UVR3_ORYSJ RecName: Full=(6-4)DNA photolyase
gi|255670698|dbj|BAF08157.2| Os02g0204400 [Oryza sativa Japonica Group]
Length = 551
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 16 WFRHGLRLHDNPAL---FEASLNSVLYPVFIFD 45
WFR GLR+HDNPAL + LYPVF+ D
Sbjct: 18 WFRKGLRVHDNPALDAARRGGAAARLYPVFVLD 50
>gi|386762983|gb|AFJ22638.1| cryptochrome 1 [Agrotis ipsilon]
Length = 528
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 13 AVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFDGETAG 50
+V WFRHGLRLHDNP+L A +P+FIFDGETAG
Sbjct: 5 SVLWFRHGLRLHDNPSLHAALEEKGFPFFPIFIFDGETAG 44
>gi|54293218|ref|YP_125633.1| hypothetical protein lpl0266 [Legionella pneumophila str. Lens]
gi|53753050|emb|CAH14497.1| hypothetical protein lpl0266 [Legionella pneumophila str. Lens]
Length = 471
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAGL 51
+A+ WFR LRL DNPA EA S + ++ P++I+D + + L
Sbjct: 3 IALVWFRQDLRLTDNPAFIEACSHHEIVIPLYIYDDKCSVL 43
>gi|218190281|gb|EEC72708.1| hypothetical protein OsI_06300 [Oryza sativa Indica Group]
Length = 551
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 16 WFRHGLRLHDNPAL---FEASLNSVLYPVFIFD 45
WFR GLR+HDNPAL + LYPVF+ D
Sbjct: 18 WFRKGLRVHDNPALDAARRGGAAARLYPVFVLD 50
>gi|224085023|ref|XP_002198533.1| PREDICTED: cryptochrome-1-like [Taeniopygia guttata]
Length = 527
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
+H FR LRLHDNP L A +S LYPV+I D
Sbjct: 6 IHLFRKELRLHDNPVLLAALESSEALYPVYILD 38
>gi|168016051|ref|XP_001760563.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688260|gb|EDQ74638.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 DTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAG 50
D N + ++ WFR+ LR+HDN AL A+ +S+ + PV+ FD + G
Sbjct: 169 DPANGCGLRRASIVWFRNDLRVHDNEALVSANRDSLSILPVYCFDPKDYG 218
>gi|110638357|ref|YP_678566.1| deoxyribodipyrimidine photolyase [Cytophaga hutchinsonii ATCC
33406]
gi|110281038|gb|ABG59224.1| deoxyribodipyrimidine photolyase (photoreactivating enzyme)
[Cytophaga hutchinsonii ATCC 33406]
Length = 433
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
EV V WFR LRL DN LF+A + + PVFIFD
Sbjct: 3 EVVVFWFRRDLRLTDNAGLFQALTSGYAVLPVFIFD 38
>gi|45935264|gb|AAS79667.1| cryptochrome 2B apoprotein [Pisum sativum]
gi|45935266|gb|AAS79668.1| cryptochrome 2B apoprotein [Pisum sativum]
Length = 598
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ + ++PVFI+ + G F
Sbjct: 9 WFRRDLRIEDNPALAAAARDGSVFPVFIWCPKEEGQF 45
>gi|52840467|ref|YP_094266.1| deoxyribodipyrimidine photolyase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52627578|gb|AAU26319.1| deoxyribodipyrimidine photolyase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 471
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAGL 51
+A+ WFR LRL DNPA EA S + ++ P++I+D + + L
Sbjct: 3 IALVWFRQDLRLTDNPAFIEACSHHEIVIPLYIYDDKCSVL 43
>gi|378776172|ref|YP_005184602.1| deoxyribodipyrimidine photolyase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|364506979|gb|AEW50503.1| deoxyribodipyrimidine photolyase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 472
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAGL 51
+A+ WFR LRL DNPA EA S + ++ P++I+D + + L
Sbjct: 4 IALVWFRQDLRLTDNPAFIEACSHHEIVIPLYIYDDKCSVL 44
>gi|119477185|ref|ZP_01617421.1| putative photolyase [marine gamma proteobacterium HTCC2143]
gi|119449548|gb|EAW30786.1| putative photolyase [marine gamma proteobacterium HTCC2143]
Length = 477
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
WFR LRL DNPAL A + PV+I D + AG
Sbjct: 2 WFRQDLRLADNPALCAACERGEIIPVYILDDQGAG 36
>gi|48716245|dbj|BAD23781.1| putative cryptochrome 2 [Oryza sativa Japonica Group]
Length = 298
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
E V WFR LR+ DNPAL A+ + + PVFI+ G F
Sbjct: 5 ERTVVWFRRDLRIDDNPALASAARDGAVLPVFIWCPADEGQF 46
>gi|384246200|gb|EIE19691.1| DNA photolyase [Coccomyxa subellipsoidea C-169]
Length = 407
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 4 PNSPNNKEVAVHWFRHGLRLHDNPALFEASLN-SVLYPVFIFD 45
P + + AV WFR+ LR+HDN AL A+ + S L PV+ FD
Sbjct: 77 PFAGGARRAAVMWFRNDLRVHDNEALAIANRDSSSLLPVYCFD 119
>gi|54296244|ref|YP_122613.1| hypothetical protein lpp0271 [Legionella pneumophila str. Paris]
gi|53750029|emb|CAH11419.1| hypothetical protein lpp0271 [Legionella pneumophila str. Paris]
Length = 471
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAGL 51
+A+ WFR LRL DNPA EA S + ++ P++I+D + + L
Sbjct: 3 IALVWFRQDLRLTDNPAFIEACSHHEIVIPLYIYDDKCSVL 43
>gi|342883710|gb|EGU84160.1| hypothetical protein FOXB_05337 [Fusarium oxysporum Fo5176]
Length = 637
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 29/39 (74%), Gaps = 4/39 (10%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
K ++WFR LRLHD+PAL +A+L+ +VL+P+F +D
Sbjct: 3 KPRVIYWFRTDLRLHDSPAL-KAALDLDPAVLWPIFTWD 40
>gi|195387030|ref|XP_002052207.1| GJ17431 [Drosophila virilis]
gi|194148664|gb|EDW64362.1| GJ17431 [Drosophila virilis]
Length = 541
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 7/43 (16%)
Query: 10 KEVAVHWFRHGLRLHDNPAL---FEASLNS----VLYPVFIFD 45
+ VHWFR GLR+HDNPAL F + S + P+FI D
Sbjct: 5 RRTLVHWFRKGLRVHDNPALSQIFNDARASPEKFYVRPIFILD 47
>gi|404313303|gb|AFR54426.1| cryptochrome 1 [Mythimna separata]
Length = 528
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 13 AVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFDGETAG 50
+V WFRHGLRLHDNP+L A +P+FIFDGETAG
Sbjct: 5 SVLWFRHGLRLHDNPSLHCALEEKGFPFFPIFIFDGETAG 44
>gi|413936068|gb|AFW70619.1| hypothetical protein ZEAMMB73_082662 [Zea mays]
Length = 397
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 6/36 (16%)
Query: 16 WFRHGLRLHDNPAL------FEASLNSVLYPVFIFD 45
WFR GLR+HDNPAL + ++ LYPVF+ D
Sbjct: 13 WFRKGLRVHDNPALDAARRHGAGAASARLYPVFVLD 48
>gi|308803621|ref|XP_003079123.1| cryptochrome-like protein 1 (ISS) [Ostreococcus tauri]
gi|116057578|emb|CAL53781.1| cryptochrome-like protein 1 (ISS) [Ostreococcus tauri]
Length = 1646
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPALFEASLN-SVLYPVFIFD 45
WFR LR+HDNPAL +L+ + PVF+ D
Sbjct: 1104 WFRKALRVHDNPALSRGTLHATACQPVFVLD 1134
>gi|167998494|ref|XP_001751953.1| AtCRY1/HY4-like cryptochrome blue light photoreceptor protein
[Physcomitrella patens subsp. patens]
gi|162697051|gb|EDQ83388.1| AtCRY1/HY4-like cryptochrome blue light photoreceptor protein
[Physcomitrella patens subsp. patens]
Length = 413
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LRL DNPAL A+ + PVF++ G F
Sbjct: 8 WFRRDLRLEDNPALIAAARAGTVVPVFVWSPAEDGQF 44
>gi|347758242|ref|YP_004865804.1| DNA photolyase family protein [Micavibrio aeruginosavorus ARL-13]
gi|347590760|gb|AEP09802.1| DNA photolyase family protein [Micavibrio aeruginosavorus ARL-13]
Length = 476
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 14 VHWFRHGLRLHDNPALFEASL--NSVLYPVFIFDGETAGLF 52
+ WFR LRL DNPA + A+L S + PVFI D + AGL+
Sbjct: 7 ILWFRQDLRLQDNPA-YHAALESGSPILPVFILDDDNAGLW 46
>gi|358394356|gb|EHK43749.1| DNA photolyase [Trichoderma atroviride IMI 206040]
Length = 625
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
K ++WFR LRLHD+PAL +A+L+ VL+P+F +D
Sbjct: 3 KPRVIYWFRTDLRLHDSPAL-QAALDLEPEVLWPIFTWD 40
>gi|46124775|ref|XP_386941.1| hypothetical protein FG06765.1 [Gibberella zeae PH-1]
Length = 685
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 27/35 (77%), Gaps = 4/35 (11%)
Query: 14 VHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
++WFR LRLHD+PAL +A+L+ SV +P+F +D
Sbjct: 59 IYWFRTDLRLHDSPAL-KAALDLDPSVFWPIFTWD 92
>gi|195997383|ref|XP_002108560.1| hypothetical protein TRIADDRAFT_51590 [Trichoplax adhaerens]
gi|190589336|gb|EDV29358.1| hypothetical protein TRIADDRAFT_51590 [Trichoplax adhaerens]
Length = 497
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
V W R+ LRL DNPALF A+ + ++I D ET G
Sbjct: 5 VVWLRYDLRLIDNPALFHAAKRGHVVIIYILDQETPG 41
>gi|410621442|ref|ZP_11332289.1| deoxyribodipyrimidine photo-lyase [Glaciecola pallidula DSM 14239
= ACAM 615]
gi|410158957|dbj|GAC27663.1| deoxyribodipyrimidine photo-lyase [Glaciecola pallidula DSM 14239
= ACAM 615]
Length = 481
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 20/32 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGE 47
WFR LRL DNPAL A N + PVFI D +
Sbjct: 12 WFRQDLRLTDNPALSLAVDNGTIIPVFILDDD 43
>gi|218191203|gb|EEC73630.1| hypothetical protein OsI_08136 [Oryza sativa Indica Group]
Length = 665
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
E V WFR LR+ DNPAL A+ + + PVFI+ G F
Sbjct: 5 ERTVVWFRRDLRIDDNPALASAARDGAVLPVFIWCPADEGQF 46
>gi|413936069|gb|AFW70620.1| hypothetical protein ZEAMMB73_082662 [Zea mays]
Length = 548
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 6/36 (16%)
Query: 16 WFRHGLRLHDNPAL------FEASLNSVLYPVFIFD 45
WFR GLR+HDNPAL + ++ LYPVF+ D
Sbjct: 13 WFRKGLRVHDNPALDAARRHGAGAASARLYPVFVLD 48
>gi|313674183|ref|YP_004052179.1| deoxyribodipyrimidine photo-lyase [Marivirga tractuosa DSM 4126]
gi|312940881|gb|ADR20071.1| Deoxyribodipyrimidine photo-lyase [Marivirga tractuosa DSM 4126]
Length = 433
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGE 47
+++++ WFR LRL+DN AL+ A ++ + P+FIFD E
Sbjct: 2 EKISIFWFRRDLRLYDNTALYYAIQENIPVLPLFIFDSE 40
>gi|405971549|gb|EKC36382.1| Cryptochrome-2 [Crassostrea gigas]
Length = 830
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Query: 14 VHWFRHGLRLHDNPALFE-ASLNSVLYPVFIF 44
V+WFR LRL+DNPALFE AS+N + VF++
Sbjct: 154 VYWFRRDLRLYDNPALFEAASMNVPVILVFLW 185
>gi|371776927|ref|ZP_09483249.1| deoxyribodipyrimidine photo-lyase [Anaerophaga sp. HS1]
Length = 64
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAGLF 52
++WFR+ LRLHDNPA + A + + PVFIFD F
Sbjct: 6 VIYWFRNDLRLHDNPAQYHAVQSGRPVIPVFIFDNTRDQEF 46
>gi|392397553|ref|YP_006434154.1| deoxyribodipyrimidine photolyase [Flexibacter litoralis DSM 6794]
gi|390528631|gb|AFM04361.1| deoxyribodipyrimidine photolyase [Flexibacter litoralis DSM 6794]
Length = 452
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGE 47
N K++A+ WFR LRL DN L+ A + + P+FI+D E
Sbjct: 9 NKKQLAIFWFRRDLRLDDNAGLYHALRSGFEVLPLFIYDTE 49
>gi|156383451|ref|XP_001632847.1| predicted protein [Nematostella vectensis]
gi|156219909|gb|EDO40784.1| predicted protein [Nematostella vectensis]
Length = 159
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNS-VLYPVFIF 44
+ + HWFR LRLHDNPAL +A N+ Y VF+
Sbjct: 5 RHTSCHWFRKDLRLHDNPALKDALDNADCFYGVFVL 40
>gi|443244632|ref|YP_007377857.1| deoxyribodipyrimidine photo-lyase [Nonlabens dokdonensis DSW-6]
gi|442802031|gb|AGC77836.1| deoxyribodipyrimidine photo-lyase [Nonlabens dokdonensis DSW-6]
Length = 440
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGE 47
+K+V V WFR LRL DN +EA + + + P+FIFD E
Sbjct: 2 SKKVNVFWFRRDLRLDDNVGFYEALKSDLPVLPIFIFDKE 41
>gi|374619940|ref|ZP_09692474.1| deoxyribodipyrimidine photolyase [gamma proteobacterium HIMB55]
gi|374303167|gb|EHQ57351.1| deoxyribodipyrimidine photolyase [gamma proteobacterium HIMB55]
Length = 481
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
FR LRLHD+PAL A+ + PVF+ D E G
Sbjct: 8 FRQDLRLHDHPALTAAAQRGAVIPVFVLDDEACG 41
>gi|148358421|ref|YP_001249628.1| deoxyribodipyrimidine photolyase [Legionella pneumophila str.
Corby]
gi|148280194|gb|ABQ54282.1| deoxyribodipyrimidine photolyase [Legionella pneumophila str.
Corby]
Length = 471
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAGL 51
+A+ WFR LRL DNPA EA S + ++ P++I+D + + L
Sbjct: 3 IALVWFRQDLRLTDNPAFIEACSHHEIVIPLYIYDDKCSVL 43
>gi|219847792|ref|YP_002462225.1| deoxyribodipyrimidine photo-lyase [Chloroflexus aggregans DSM
9485]
gi|219542051|gb|ACL23789.1| Deoxyribodipyrimidine photo-lyase [Chloroflexus aggregans DSM
9485]
Length = 479
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS--VLYPVFIFDGETAG 50
+HWFR LRL DN AL A+ S + PVFIFD G
Sbjct: 3 IHWFRRDLRLRDNTALLAAADASGGAVIPVFIFDDAILG 41
>gi|167998114|ref|XP_001751763.1| cryptochrome 1a [Physcomitrella patens subsp. patens]
gi|5731739|dbj|BAA83338.1| blue light photoreceptor cryptochrome [Physcomitrella patens]
gi|162696861|gb|EDQ83198.1| cryptochrome 1a [Physcomitrella patens subsp. patens]
Length = 727
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
+ WFR LRL DNPAL A+ + PVF++ G F
Sbjct: 4 CTIVWFRRDLRLEDNPALIAAARAGTVVPVFVWSPAEDGQF 44
>gi|16416405|dbj|BAB70665.1| blue-light receptor cryptochrome [Physcomitrella patens]
Length = 727
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
+ WFR LRL DNPAL A+ + PVF++ G F
Sbjct: 4 CTIVWFRRDLRLEDNPALIAAARAGTVVPVFVWSPAEDGQF 44
>gi|28372347|dbj|BAC56984.1| cryptochrome 2 [Oryza sativa Japonica Group]
gi|48716244|dbj|BAD23780.1| cryptochrome 2 [Oryza sativa Japonica Group]
gi|215686763|dbj|BAG89613.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623271|gb|EEE57403.1| hypothetical protein OsJ_07585 [Oryza sativa Japonica Group]
Length = 651
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
E V WFR LR+ DNPAL A+ + + PVFI+ G F
Sbjct: 5 ERTVVWFRRDLRIDDNPALASAARDGAVLPVFIWCPADEGQF 46
>gi|119503382|ref|ZP_01625466.1| DNA photolyase [marine gamma proteobacterium HTCC2080]
gi|119461028|gb|EAW42119.1| DNA photolyase [marine gamma proteobacterium HTCC2080]
Length = 481
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
+++WFRH LRL D P L A+ + PVF++D G
Sbjct: 4 ASLYWFRHDLRLADLPGLIAAAKAGTVIPVFVWDEALGG 42
>gi|255581443|ref|XP_002531529.1| DNA photolyase, putative [Ricinus communis]
gi|223528846|gb|EEF30848.1| DNA photolyase, putative [Ricinus communis]
Length = 640
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ + + PVFI+ + G F
Sbjct: 9 WFRRDLRIEDNPALAAAARDGCILPVFIWCPQEEGQF 45
>gi|340619934|ref|YP_004738387.1| deoxyribodipyrimidine photo-lyase [Zobellia galactanivorans]
gi|339734731|emb|CAZ98108.1| Deoxyribodipyrimidine photo-lyase [Zobellia galactanivorans]
Length = 436
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGE 47
+++ WFR LRL DN FEA N + P+FIFD E
Sbjct: 5 ISIFWFRRDLRLDDNLGFFEALKGNHAVMPIFIFDKE 41
>gi|426404142|ref|YP_007023113.1| deoxyribodipyrimidine photo-lyase [Bdellovibrio bacteriovorus
str. Tiberius]
gi|425860810|gb|AFY01846.1| deoxyribodipyrimidine photolyase-class I [Bdellovibrio
bacteriovorus str. Tiberius]
Length = 435
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGE 47
+V V WFR LRL DN L+ A S + P+FIFD E
Sbjct: 3 KVTVFWFRRDLRLDDNAGLYHALKERSAVLPLFIFDSE 40
>gi|372271292|ref|ZP_09507340.1| deoxyribodipyrimidine photolyase [Marinobacterium stanieri S30]
Length = 502
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
+V + WF+ LRLHD+PAL EA+ + + P+FI +
Sbjct: 4 QVNIVWFKRDLRLHDHPALTEAAQHGPVLPLFIVE 38
>gi|402819360|ref|ZP_10868928.1| hypothetical protein IMCC14465_01620 [alpha proteobacterium
IMCC14465]
gi|402511507|gb|EJW21768.1| hypothetical protein IMCC14465_01620 [alpha proteobacterium
IMCC14465]
Length = 474
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLN-SVLYPVFIFDGETAGL 51
++WFR LRL DNPAL A+ + + P+FIFD + L
Sbjct: 6 IYWFRQDLRLADNPALLHAAHSGKTVIPIFIFDPDDRSL 44
>gi|374598111|ref|ZP_09671113.1| DNA photolyase FAD-binding [Myroides odoratus DSM 2801]
gi|423323552|ref|ZP_17301394.1| hypothetical protein HMPREF9716_00751 [Myroides odoratimimus CIP
103059]
gi|373909581|gb|EHQ41430.1| DNA photolyase FAD-binding [Myroides odoratus DSM 2801]
gi|404609317|gb|EKB08700.1| hypothetical protein HMPREF9716_00751 [Myroides odoratimimus CIP
103059]
Length = 434
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFD 45
+E+ + WFR +RLHDN L+ A S VL P+FIFD
Sbjct: 2 EEIVIFWFRRDIRLHDNVGLYHAIQSGKKVL-PIFIFD 38
>gi|254471109|ref|ZP_05084512.1| deoxyribodipyrimidine photo-lyase [Pseudovibrio sp. JE062]
gi|211960251|gb|EEA95448.1| deoxyribodipyrimidine photo-lyase [Pseudovibrio sp. JE062]
Length = 471
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
+ +HWFR LRL DNPAL A + P++I + + G
Sbjct: 5 IVIHWFRQDLRLSDNPALSAACEAGEVIPLYILNDKEYG 43
>gi|168038306|ref|XP_001771642.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677081|gb|EDQ63556.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 665
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
A+ WF+H LRL D+P + AS + PV+IFD
Sbjct: 1 AILWFKHDLRLDDHPGVAAASAYKRVLPVYIFD 33
>gi|424869859|ref|ZP_18293539.1| Deoxyribodipyrimidine photolyase [Leptospirillum sp. Group II
'C75']
gi|124514880|gb|EAY56391.1| Deoxyribodipyrimidine photolyase [Leptospirillum rubarum]
gi|387220321|gb|EIJ75034.1| Deoxyribodipyrimidine photolyase [Leptospirillum sp. Group II
'C75']
Length = 536
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 4 PNSPNNKEV---AVHWFRHGLRLHDNPALFEASLNSVLYPVFI 43
P P E ++ WFR+ LRL DNP L EA+ L PVFI
Sbjct: 52 PKPPTKSEAFISSIVWFRNNLRLSDNPPLREAAERGPLLPVFI 94
>gi|195119085|ref|XP_002004062.1| GI19664 [Drosophila mojavensis]
gi|193914637|gb|EDW13504.1| GI19664 [Drosophila mojavensis]
Length = 532
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 7/43 (16%)
Query: 10 KEVAVHWFRHGLRLHDNPALFE------ASLNSV-LYPVFIFD 45
+ +HWFR GLR+HDNPAL + AS + + P+F+ D
Sbjct: 5 RRTLIHWFRKGLRVHDNPALIQIFNKAGASPDKFSVRPIFVLD 47
>gi|3551219|dbj|BAA32808.1| blue-light photoreceptor [Adiantum capillus-veneris]
gi|3551225|dbj|BAA32811.1| blue-light photoreceptor [Adiantum capillus-veneris]
Length = 679
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A + PVFI+ E G F
Sbjct: 13 WFRRDLRIEDNPALVAAVRAGPVLPVFIWSPEEEGQF 49
>gi|348029287|ref|YP_004871973.1| DNA photolyase [Glaciecola nitratireducens FR1064]
gi|347946630|gb|AEP29980.1| DNA photolyase [Glaciecola nitratireducens FR1064]
Length = 481
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 6 SPNNKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGE 47
S N + + WFR LR+ DNPAL A+ N + PVFI D +
Sbjct: 2 SLNPTKKIIVWFRQDLRITDNPALSLAADNGSIIPVFILDDD 43
>gi|448592440|ref|ZP_21651547.1| deoxyribodipyrimidine photolyase [Haloferax elongans ATCC
BAA-1513]
gi|445731445|gb|ELZ83029.1| deoxyribodipyrimidine photolyase [Haloferax elongans ATCC
BAA-1513]
Length = 496
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
A+ WFR LRLHDN AL +A + PV+ FD G
Sbjct: 5 TALVWFRRDLRLHDNEALVDACGADQVVPVYCFDPRDYG 43
>gi|387812715|ref|YP_005428192.1| Deoxyribodipyrimidine photolyase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381337722|emb|CCG93769.1| Deoxyribodipyrimidine photolyase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 440
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
++WF LRLHDNPAL A+ + +L VF+ D
Sbjct: 4 LYWFTRDLRLHDNPALLAAARSDMLLCVFVVD 35
>gi|120553261|ref|YP_957612.1| DNA photolyase FAD-binding subunit [Marinobacter aquaeolei VT8]
gi|120323110|gb|ABM17425.1| deoxyribodipyrimidine photo-lyase (single-stranded DNA-specific)
[Marinobacter aquaeolei VT8]
Length = 440
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
++WF LRLHDNPAL A+ + +L VF+ D
Sbjct: 4 LYWFTRDLRLHDNPALLAAARSDMLLCVFVVD 35
>gi|402495080|ref|ZP_10841814.1| deoxyribodipyrimidine photo-lyase [Aquimarina agarilytica ZC1]
Length = 433
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGE 47
++ + WFR LRL DN LF A S N + P+FIFD E
Sbjct: 3 DITIFWFRRDLRLTDNTGLFFALSENKNVLPIFIFDTE 40
>gi|397665892|ref|YP_006507429.1| deoxyribodipyrimidine photo-lyase [Legionella pneumophila subsp.
pneumophila]
gi|395129303|emb|CCD07533.1| Deoxyribodipyrimidine photo-lyase [Legionella pneumophila subsp.
pneumophila]
Length = 471
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEASL-NSVLYPVFIFDGETAGL 51
+A+ WFR LRL DNPA EA + ++ P++I+D + + L
Sbjct: 3 IALVWFRQDLRLTDNPAFIEACFHHEIVIPLYIYDDKCSVL 43
>gi|217074548|gb|ACJ85634.1| unknown [Medicago truncatula]
Length = 235
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Query: 4 PNSPNN----KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
PN P++ + A+ WFR+ LR+HDN AL A+ S+ + PV+ FD
Sbjct: 107 PNDPSSAAALRRTAIVWFRNDLRVHDNEALNTANNESISVLPVYCFD 153
>gi|297799464|ref|XP_002867616.1| deoxyribodipyrimidine photolyase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297313452|gb|EFH43875.1| deoxyribodipyrimidine photolyase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 557
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 5 NSPNNKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
++ N AV WF+H LR+ D+P L +S +S + P+++ D
Sbjct: 25 SATNEGSTAVVWFKHDLRVDDHPGLLASSKHSSVIPLYVLD 65
>gi|224128470|ref|XP_002320340.1| predicted protein [Populus trichocarpa]
gi|222861113|gb|EEE98655.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 2 DTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAG 50
D N+ + + WFR+ LR+HDN L AS +S+ + PV+ FD G
Sbjct: 76 DPSNAAGTRRACIVWFRNDLRVHDNECLNSASNDSMSVLPVYCFDPRDYG 125
>gi|448578492|ref|ZP_21643927.1| deoxyribodipyrimidine photolyase [Haloferax larsenii JCM 13917]
gi|445727033|gb|ELZ78649.1| deoxyribodipyrimidine photolyase [Haloferax larsenii JCM 13917]
Length = 508
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
A+ WFR LRLHDN AL +A + PV+ FD
Sbjct: 5 TALVWFRRDLRLHDNEALVDACGADRVVPVYCFD 38
>gi|399220401|gb|AFP33464.1| cryptochrome 1 [Dicentrarchus labrax]
Length = 567
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
+HWFR GLRLHDNP+L ++ + L V+I D AG
Sbjct: 6 IHWFRKGLRLHDNPSLRDSIRGADSLRCVYILDPWFAG 43
>gi|358385715|gb|EHK23311.1| putative photolyase class 1 [Trichoderma virens Gv29-8]
Length = 627
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
K ++WFR LRLHD+PAL +A+L+ VL+P+F +D
Sbjct: 3 KPRVIYWFRTDLRLHDSPAL-QAALDLEPEVLWPIFTWD 40
>gi|226494726|ref|NP_001146620.1| uncharacterized protein LOC100280217 [Zea mays]
gi|219888051|gb|ACL54400.1| unknown [Zea mays]
Length = 421
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 6/36 (16%)
Query: 16 WFRHGLRLHDNPAL------FEASLNSVLYPVFIFD 45
WFR GLR+HDNPAL + ++ LYPVF+ D
Sbjct: 13 WFRKGLRVHDNPALDAARRHGAGAASARLYPVFVLD 48
>gi|336173293|ref|YP_004580431.1| deoxyribodipyrimidine photo-lyase [Lacinutrix sp. 5H-3-7-4]
gi|334727865|gb|AEH02003.1| Deoxyribodipyrimidine photo-lyase [Lacinutrix sp. 5H-3-7-4]
Length = 434
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGE 47
+K V + WFR LRL DN FEA + P+FIFD E
Sbjct: 2 SKTVNIFWFRRDLRLDDNVGFFEALKAEHPVLPIFIFDSE 41
>gi|302417194|ref|XP_003006428.1| cryptochrome-1 [Verticillium albo-atrum VaMs.102]
gi|261354030|gb|EEY16458.1| cryptochrome-1 [Verticillium albo-atrum VaMs.102]
Length = 626
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
Query: 14 VHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
++WFR LRLHD+PAL A+L +VL+PVF +D
Sbjct: 7 IYWFRTDLRLHDSPAL-TAALELEPAVLWPVFTWD 40
>gi|4454017|emb|CAA23070.1| hypothetical protein [Arabidopsis thaliana]
gi|7269380|emb|CAB81340.1| hypothetical protein [Arabidopsis thaliana]
Length = 581
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 5 NSPNNKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
++ N AV WF+H LR+ D+P L AS + + P+++ D
Sbjct: 29 SATNEGSTAVVWFKHDLRVDDHPGLLAASKHRAVIPLYVLD 69
>gi|240256063|ref|NP_194259.4| DNA photolyase [Arabidopsis thaliana]
gi|332659635|gb|AEE85035.1| DNA photolyase [Arabidopsis thaliana]
Length = 692
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 5 NSPNNKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
++ N AV WF+H LR+ D+P L AS + + P+++ D
Sbjct: 29 SATNEGSTAVVWFKHDLRVDDHPGLLAASKHRAVIPLYVLD 69
>gi|227538334|ref|ZP_03968383.1| deoxyribodipyrimidine photolyase PhrB1 [Sphingobacterium
spiritivorum ATCC 33300]
gi|227241849|gb|EEI91864.1| deoxyribodipyrimidine photolyase PhrB1 [Sphingobacterium
spiritivorum ATCC 33300]
Length = 437
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDG 46
++ WFR LRL DN ALF A S + + PVFIFD
Sbjct: 6 TSIFWFRRDLRLEDNHALFRALSSEAAVQPVFIFDS 41
>gi|383142802|gb|AFG52796.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
Length = 119
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 2 DTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
D N+ ++ A+ WFR+ LR+HDN AL A+ ++ + PV+ FD
Sbjct: 47 DPSNAAAMRKAAIVWFRNDLRVHDNEALTNANKEALSILPVYCFD 91
>gi|302745152|gb|ADL62679.1| cryptochrome 1a [Phreatichthys andruzzii]
Length = 623
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
VHWFR GLRLHDNP+L ++ + + V+I D AG
Sbjct: 6 VHWFRKGLRLHDNPSLRDSIQGAHTVRCVYILDPWFAG 43
>gi|225875100|emb|CAQ86665.1| cryptochrome [Euphausia superba]
Length = 545
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 14 VHWFRHGLRLHDNPALFEASLN--SVLYPVFIFDGETAG 50
VHWFR GLRLHDNP L +A L + +FI D AG
Sbjct: 10 VHWFRKGLRLHDNPTL-KAGLKGATTFRGIFIIDPWFAG 47
>gi|297180123|gb|ADI16346.1| deoxyribodipyrimidine photolyase [uncultured bacterium
HF130_01F24]
Length = 478
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 13 AVHWFRHGLRLHDNPAL-FEASLNSVLYPVFIFDGETAG 50
++ WFR LRL DNPAL F AS+ VL P++I D + A
Sbjct: 7 SIVWFRQDLRLQDNPALEFAASVGEVL-PIYIVDEKNAA 44
>gi|296105770|ref|YP_003617470.1| deoxyribodipyrimidine photo-lyase [Legionella pneumophila 2300/99
Alcoy]
gi|295647671|gb|ADG23518.1| deoxyribodipyrimidine photo-lyase [Legionella pneumophila 2300/99
Alcoy]
Length = 471
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAGL 51
+A+ WFR LRL DNPA EA S + + P++I+D + + L
Sbjct: 3 IALVWFRQDLRLTDNPAFIEACSHHETIIPLYIYDDKCSVL 43
>gi|242092996|ref|XP_002436988.1| hypothetical protein SORBIDRAFT_10g013750 [Sorghum bicolor]
gi|241915211|gb|EER88355.1| hypothetical protein SORBIDRAFT_10g013750 [Sorghum bicolor]
Length = 654
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYPVFIF 44
V WFR LR+HDNPAL A+ + P+FI+
Sbjct: 8 VVWFRRDLRIHDNPALAAAAKEGSVLPLFIW 38
>gi|51948352|gb|AAU14280.1| cryptochrome-like protein 1 [Ostreococcus tauri]
Length = 559
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPALFEASLN-SVLYPVFIFD 45
WFR LR+HDNPAL +L+ + PVF+ D
Sbjct: 17 WFRKALRVHDNPALSRGTLHATACQPVFVLD 47
>gi|302790279|ref|XP_002976907.1| hypothetical protein SELMODRAFT_106065 [Selaginella
moellendorffii]
gi|300155385|gb|EFJ22017.1| hypothetical protein SELMODRAFT_106065 [Selaginella
moellendorffii]
Length = 499
Score = 38.5 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 5 NSPNNKEVAVHWFRHGLRLHDNPALFE--ASLNSVLYPVFIFD 45
+S N K V++ WFR+ LR+ DN ALF+ AS +SVL PV+ D
Sbjct: 17 SSRNGKGVSIMWFRNDLRIVDNEALFKAWASSSSVL-PVYCVD 58
>gi|163788107|ref|ZP_02182553.1| deoxyribodipyrimidine photolyase-class I [Flavobacteriales
bacterium ALC-1]
gi|159876427|gb|EDP70485.1| deoxyribodipyrimidine photolyase-class I [Flavobacteriales
bacterium ALC-1]
Length = 434
Score = 38.5 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGE 47
K V + WFR LRL DN +EA N + P+FIFD E
Sbjct: 3 KTVNIFWFRRDLRLDDNVGFYEALKGNHPVLPIFIFDSE 41
>gi|94733627|emb|CAK05311.1| cryptochrome 1b [Danio rerio]
Length = 606
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
VHWFR GLRLHDNP+L ++ + L V+I D AG
Sbjct: 6 VHWFRKGLRLHDNPSLRDSIKGADNLRCVYILDPWFAG 43
>gi|170878123|gb|ACB38886.1| putative 6-4 photolyase [Cercospora zeae-maydis]
Length = 691
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
K ++WFR LRLHD+PAL +A+L+ VLYP++ +D
Sbjct: 3 KPRVIYWFRTDLRLHDSPAL-KAALDLKPEVLYPIWCWD 40
>gi|321466446|gb|EFX77441.1| CRY-D [Daphnia pulex]
Length = 525
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
V WFR GLR+HDNPAL A NS +F+FD
Sbjct: 3 VLWFRRGLRIHDNPALLSALENSKDFIALFVFD 35
>gi|357439517|ref|XP_003590036.1| Cryptochrome 2B [Medicago truncatula]
gi|355479084|gb|AES60287.1| Cryptochrome 2B [Medicago truncatula]
Length = 600
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ + ++PVFI + G F
Sbjct: 7 WFRRDLRIEDNPALAAAARDGSVFPVFICCPKEEGQF 43
>gi|116787609|gb|ABK24574.1| unknown [Picea sitchensis]
gi|224284157|gb|ACN39815.1| unknown [Picea sitchensis]
Length = 526
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 DTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAG 50
D N+ ++ A+ WFR+ LR+HDN AL A+ ++ + PV+ FD G
Sbjct: 179 DPSNAAALRKAAIVWFRNDLRVHDNEALSSANKEALSVLPVYCFDPRDYG 228
>gi|148540005|ref|NP_571865.4| cryptochrome 1b [Danio rerio]
gi|27882364|gb|AAH44558.1| Cry1b protein [Danio rerio]
Length = 606
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
VHWFR GLRLHDNP+L ++ + L V+I D AG
Sbjct: 6 VHWFRKGLRLHDNPSLRDSIKGADNLRCVYILDPWFAG 43
>gi|3551217|dbj|BAA32807.1| blue-light photoreceptor [Adiantum capillus-veneris]
gi|3551223|dbj|BAA32810.1| blue-light photoreceptor [Adiantum capillus-veneris]
Length = 637
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
+ WFR LR+ DNPAL A + P+FI+ E G F
Sbjct: 3 CTIVWFRRDLRVEDNPALVAAVRAGTVVPLFIWTPEEEGQF 43
>gi|8698586|dbj|BAA96847.1| cryptochrome 1b [Danio rerio]
Length = 606
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
VHWFR GLRLHDNP+L ++ + L V+I D AG
Sbjct: 6 VHWFRKGLRLHDNPSLRDSIKGADNLRCVYILDPWFAG 43
>gi|359407531|ref|ZP_09200008.1| deoxyribodipyrimidine photolyase [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356677570|gb|EHI49914.1| deoxyribodipyrimidine photolyase [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 487
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
V +HWFR LRL DNPAL A+ + + ++I D
Sbjct: 3 VTIHWFRSDLRLSDNPALTSAAQSGEVICLYILD 36
>gi|260829102|ref|XP_002609501.1| hypothetical protein BRAFLDRAFT_230263 [Branchiostoma floridae]
gi|229294858|gb|EEN65511.1| hypothetical protein BRAFLDRAFT_230263 [Branchiostoma floridae]
Length = 514
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 13 AVHWFRHGLRLHDNPALFEA----SLNSVLYPVFIFDGETAG 50
+HWFR GLRLHDNP+L +A V V++ D AG
Sbjct: 4 TIHWFRKGLRLHDNPSLRDALQMLQPGDVWRCVYVLDPWFAG 45
>gi|449304579|gb|EMD00586.1| hypothetical protein BAUCODRAFT_175264 [Baudoinia compniacensis
UAMH 10762]
Length = 647
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 29/40 (72%), Gaps = 4/40 (10%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
+K ++WFR LRLHD+PAL +A+L+ VLYP++ +D
Sbjct: 2 SKPRVLYWFRTDLRLHDSPAL-KAALDLQPEVLYPIWCWD 40
>gi|302797733|ref|XP_002980627.1| hypothetical protein SELMODRAFT_268379 [Selaginella
moellendorffii]
gi|300151633|gb|EFJ18278.1| hypothetical protein SELMODRAFT_268379 [Selaginella
moellendorffii]
Length = 499
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 5 NSPNNKEVAVHWFRHGLRLHDNPALFE--ASLNSVLYPVFIFD 45
+S N K V++ WFR+ LR+ DN ALF+ AS +SVL PV+ D
Sbjct: 17 SSRNGKGVSIMWFRNDLRIVDNEALFKAWASSSSVL-PVYCVD 58
>gi|432863497|ref|XP_004070096.1| PREDICTED: cryptochrome-2-like [Oryzias latipes]
Length = 806
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 4 PNSPNNKEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGE 47
P SP+ + WFR LRL DNPAL A +++ + P+FI+ E
Sbjct: 213 PGSPSASPPVLLWFRRDLRLCDNPALNAALEMDAPVIPIFIWSPE 257
>gi|361066937|gb|AEW07780.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
gi|383142788|gb|AFG52782.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
gi|383142789|gb|AFG52783.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
gi|383142790|gb|AFG52784.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
gi|383142791|gb|AFG52785.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
gi|383142792|gb|AFG52786.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
gi|383142793|gb|AFG52787.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
gi|383142794|gb|AFG52788.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
gi|383142795|gb|AFG52789.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
gi|383142796|gb|AFG52790.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
gi|383142797|gb|AFG52791.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
gi|383142799|gb|AFG52793.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
gi|383142800|gb|AFG52794.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
gi|383142801|gb|AFG52795.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
gi|383142803|gb|AFG52797.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
gi|383142804|gb|AFG52798.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
gi|383142805|gb|AFG52799.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
Length = 119
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 2 DTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
D N+ ++ A+ WFR+ LR+HDN AL A+ ++ + PV+ FD
Sbjct: 47 DPSNAAAMRKAAIVWFRNDLRVHDNEALTNANKEALSVLPVYCFD 91
>gi|383450756|ref|YP_005357477.1| Deoxyribodipyrimidine photolyase PhrB1 [Flavobacterium indicum
GPTSA100-9]
gi|380502378|emb|CCG53420.1| Deoxyribodipyrimidine photolyase PhrB1 [Flavobacterium indicum
GPTSA100-9]
Length = 428
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
+ + WFR LRL DN ALF A + N + P+FIFD
Sbjct: 1 MTIFWFRRDLRLEDNTALFHALNENEEVLPIFIFD 35
>gi|126663929|ref|ZP_01734924.1| deoxyribodipyrimidine photolyase-class I [Flavobacteria bacterium
BAL38]
gi|126624193|gb|EAZ94886.1| deoxyribodipyrimidine photolyase-class I [Flavobacteria bacterium
BAL38]
Length = 428
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSV--LYPVFIFDGE 47
+ WFR LRL DN LF A LNS + P+FIFD E
Sbjct: 3 IFWFRRDLRLEDNVGLFHA-LNSTEDVLPIFIFDSE 37
>gi|410479530|ref|YP_006767167.1| deoxyribodipyrimidine photolyase [Leptospirillum ferriphilum ML-04]
gi|406774782|gb|AFS54207.1| deoxyribodipyrimidine photolyase [Leptospirillum ferriphilum ML-04]
Length = 576
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 4 PNSPNNKEV---AVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
P +P E ++ WFR+ LRL DNP L EA+ L PVF+ GE G
Sbjct: 92 PEAPTKTEAHISSIVWFRNNLRLLDNPPLREAAERGPLLPVFV--GEHPG 139
>gi|400602563|gb|EJP70165.1| DNA photolyase [Beauveria bassiana ARSEF 2860]
Length = 623
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
K ++WFR LRLHD+PAL +A+L+ +L+P+F +D
Sbjct: 3 KPRVIYWFRTDLRLHDSPAL-KAALDLDPEILWPIFTWD 40
>gi|374329028|ref|YP_005079212.1| FAD binding domain of DNA photolyase [Pseudovibrio sp. FO-BEG1]
gi|359341816|gb|AEV35190.1| FAD binding domain of DNA photolyase [Pseudovibrio sp. FO-BEG1]
Length = 471
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
+ +HWFR LRL DNPAL A + P++I + + G
Sbjct: 5 IVIHWFRQDLRLSDNPALSAACDVGEVIPLYILNDKEYG 43
>gi|206603959|gb|EDZ40439.1| Deoxyribodipyrimidine photolyase [Leptospirillum sp. Group II
'5-way CG']
Length = 534
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 4 PNSPNNKEV---AVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
P +P E ++ WFR+ LRL DNP L EA+ L PVF+ GE G
Sbjct: 50 PEAPTKTEAHISSIVWFRNNLRLLDNPPLREAAERGPLLPVFV--GEHPG 97
>gi|408391364|gb|EKJ70743.1| hypothetical protein FPSE_09113 [Fusarium pseudograminearum
CS3096]
Length = 637
Score = 38.1 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
K ++WFR LRLHD+PAL +A+L+ +V +P+F +D
Sbjct: 3 KPRVIYWFRTDLRLHDSPAL-KAALDLDPAVFWPIFTWD 40
>gi|254445216|ref|ZP_05058692.1| deoxyribodipyrimidine photolyase family [Verrucomicrobiae
bacterium DG1235]
gi|198259524|gb|EDY83832.1| deoxyribodipyrimidine photolyase family [Verrucomicrobiae
bacterium DG1235]
Length = 472
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
+ WFR LRL DNPAL EA + + PV++FD E G
Sbjct: 8 IVWFRRDLRLADNPALSEALASGEPVLPVYVFDEEGEG 45
>gi|378728105|gb|EHY54564.1| cryptochrome [Exophiala dermatitidis NIH/UT8656]
Length = 987
Score = 38.1 bits (87), Expect = 0.77, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 7 PNNKEVAVHWFRHGLRLHDNPALFEA-SLN-SVLYPVFIFD 45
PN ++WFR LRLHD+P L A SL+ S L P++I+D
Sbjct: 46 PNPNPRVIYWFRTDLRLHDSPGLTTALSLDPSALIPLWIWD 86
>gi|255037995|ref|YP_003088616.1| deoxyribodipyrimidine photo-lyase [Dyadobacter fermentans DSM
18053]
gi|254950751|gb|ACT95451.1| Deoxyribodipyrimidine photo-lyase [Dyadobacter fermentans DSM
18053]
Length = 442
Score = 38.1 bits (87), Expect = 0.77, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
++A+ WFR LRLHDN L+ A + + P+FIFD
Sbjct: 8 KIAIFWFRRDLRLHDNAGLYYALRSGYPVVPLFIFD 43
>gi|163759469|ref|ZP_02166554.1| DNA photolyase [Hoeflea phototrophica DFL-43]
gi|162283066|gb|EDQ33352.1| DNA photolyase [Hoeflea phototrophica DFL-43]
Length = 484
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 3 TPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
TP++ N A+ WFR+ LR++DN AL AS + + PV+I +
Sbjct: 2 TPDNFINDRPAIVWFRNDLRVNDNAALLAASSHKQVVPVYILE 44
>gi|383142798|gb|AFG52792.1| Pinus taeda anonymous locus 0_11459_02 genomic sequence
Length = 119
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 2 DTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
D N+ ++ A+ WFR+ LR+HDN AL A+ ++ + PV+ FD
Sbjct: 47 DPSNAAAMRKAAIVWFRNDLRVHDNEALTNANKEALSVLPVYCFD 91
>gi|372221339|ref|ZP_09499760.1| deoxyribodipyrimidine photo-lyase [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 436
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGE 47
++++ WFR LRL DN L++A S + + P+FIFD E
Sbjct: 4 KISIFWFRRDLRLEDNVGLYQALSGDYPILPIFIFDKE 41
>gi|452989588|gb|EME89343.1| hypothetical protein MYCFIDRAFT_201892 [Pseudocercospora
fijiensis CIRAD86]
Length = 655
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
K ++WFR LRLHD+PAL +A+L+ VLYP++ +D
Sbjct: 3 KPRVLYWFRTDLRLHDSPAL-KAALDLQPEVLYPIWCWD 40
>gi|401782500|dbj|BAM36553.1| cryptochrome 2 [Fragaria x ananassa]
Length = 646
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
+ WFR LR+ DNPAL A + ++PV+I+ + G F
Sbjct: 7 TIVWFRRDLRIEDNPALAAAVRDGAVFPVYIWCPKDEGHF 46
>gi|148657549|ref|YP_001277754.1| deoxyribodipyrimidine photolyase [Roseiflexus sp. RS-1]
gi|148569659|gb|ABQ91804.1| Deoxyribodipyrimidine photo-lyase type I [Roseiflexus sp. RS-1]
Length = 491
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS--VLYPVFIFD 45
+HWFR LRL DNPAL A+ S + P+FI D
Sbjct: 4 IHWFRRDLRLRDNPALSGAAARSGGRVIPLFILD 37
>gi|332557576|ref|ZP_08411898.1| deoxyribodipyrimidine photo-lyase [Rhodobacter sphaeroides WS8N]
gi|332275288|gb|EGJ20603.1| deoxyribodipyrimidine photo-lyase [Rhodobacter sphaeroides WS8N]
Length = 471
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAGL 51
+ WFR LRL DNP L EA+ L P+FI D ET L
Sbjct: 8 ILWFRRDLRLADNPMLAEAAATGRPLIPLFILDPETEAL 46
>gi|126461586|ref|YP_001042700.1| deoxyribodipyrimidine photo-lyase [Rhodobacter sphaeroides ATCC
17029]
gi|126103250|gb|ABN75928.1| Deoxyribodipyrimidine photo-lyase type I [Rhodobacter sphaeroides
ATCC 17029]
Length = 471
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAGL 51
+ WFR LRL DNP L EA+ L P+FI D ET L
Sbjct: 8 ILWFRRDLRLADNPMLAEAAATGRPLIPLFILDPETEAL 46
>gi|224102189|ref|XP_002312581.1| predicted protein [Populus trichocarpa]
gi|222852401|gb|EEE89948.1| predicted protein [Populus trichocarpa]
Length = 573
Score = 37.7 bits (86), Expect = 0.91, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIF 44
WFR LR+ DNPAL ++ + ++PVFI+
Sbjct: 9 WFRRDLRIEDNPALAASARDGCVFPVFIW 37
>gi|84684767|ref|ZP_01012667.1| deoxyribodipyrimidine photolyase [Maritimibacter alkaliphilus
HTCC2654]
gi|84667102|gb|EAQ13572.1| deoxyribodipyrimidine photolyase [Maritimibacter alkaliphilus
HTCC2654]
Length = 475
Score = 37.7 bits (86), Expect = 0.91, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGL 51
WFR LRL D+PAL+ A+ ++ P+FI D GL
Sbjct: 9 WFRRDLRLSDHPALWAAANAGLVIPLFIRDQSVDGL 44
>gi|407771650|ref|ZP_11119003.1| Deoxyribodipyrimidine photolyase [Thalassospira xiamenensis M-5 =
DSM 17429]
gi|407285351|gb|EKF10854.1| Deoxyribodipyrimidine photolyase [Thalassospira xiamenensis M-5 =
DSM 17429]
Length = 494
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
Query: 6 SPNNKEVAVHWFRHGLRLHDNPALFEASL------NSVLYPVFIFD 45
S + +A+ WFR+ LRL DNPAL AS+ N ++ PVFI D
Sbjct: 3 SASAAPIAIMWFRNDLRLADNPAL-NASVKWAQQNNGIVLPVFILD 47
>gi|254489917|ref|ZP_05103112.1| cryptochrome, DASH family [Methylophaga thiooxidans DMS010]
gi|224465002|gb|EEF81256.1| cryptochrome, DASH family [Methylophaga thiooxydans DMS010]
Length = 441
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLN 35
+ + WF + LR+HDNPAL EASLN
Sbjct: 3 KTGLFWFNNDLRVHDNPALLEASLN 27
>gi|428178658|gb|EKX47532.1| hypothetical protein GUITHDRAFT_137315 [Guillardia theta CCMP2712]
Length = 1209
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 17 FRHGLRLHDNPALFE-ASLNSVLYPVFIFDGE 47
FR+ LRL DNPALF ASL + PVF++D E
Sbjct: 729 FRNDLRLEDNPALFHAASLCRPVLPVFVWDPE 760
>gi|77462693|ref|YP_352197.1| deoxyribodipyrimidine photo-lyase type I [Rhodobacter sphaeroides
2.4.1]
gi|77387111|gb|ABA78296.1| Deoxyribodipyrimidine photo-lyase type I [Rhodobacter sphaeroides
2.4.1]
Length = 471
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAGL 51
+ WFR LRL DNP L EA+ L P+FI D ET L
Sbjct: 8 ILWFRRDLRLADNPMLAEAAATGRPLIPLFILDPETEAL 46
>gi|221638553|ref|YP_002524815.1| Deoxyribodipyrimidine photo-lyase type I [Rhodobacter sphaeroides
KD131]
gi|221159334|gb|ACM00314.1| Deoxyribodipyrimidine photo-lyase type I [Rhodobacter sphaeroides
KD131]
Length = 471
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAGL 51
+ WFR LRL DNP L EA+ L P+FI D ET L
Sbjct: 8 ILWFRRDLRLADNPMLAEAAATGRPLIPLFILDPETEAL 46
>gi|429207044|ref|ZP_19198304.1| Deoxyribodipyrimidine photolyase [Rhodobacter sp. AKP1]
gi|428190039|gb|EKX58591.1| Deoxyribodipyrimidine photolyase [Rhodobacter sp. AKP1]
Length = 470
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAGL 51
+ WFR LRL DNP L EA+ L P+FI D ET L
Sbjct: 7 ILWFRRDLRLADNPMLAEAAATGRPLIPLFILDPETEAL 45
>gi|453088843|gb|EMF16883.1| FAD_binding_7-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 637
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 29/40 (72%), Gaps = 4/40 (10%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
+K ++WFR LRLHD+PAL +A+L+ VLYP++ +D
Sbjct: 2 SKPRILYWFRTDLRLHDSPAL-KAALDLQPEVLYPIWCWD 40
>gi|365857119|ref|ZP_09397117.1| putative deoxyribodipyrimidine photo-lyase [Acetobacteraceae
bacterium AT-5844]
gi|363716733|gb|EHM00129.1| putative deoxyribodipyrimidine photo-lyase [Acetobacteraceae
bacterium AT-5844]
Length = 484
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
+ WFR+ LRL DN AL AS L PV++ D E AG +
Sbjct: 13 ILWFRNDLRLEDNAALHAASEGKTL-PVYVLDDEAAGRW 50
>gi|410861788|ref|YP_006977022.1| deoxyribodipyrimidine photo-lyase [Alteromonas macleodii AltDE1]
gi|410819050|gb|AFV85667.1| deoxyribodipyrimidine photo-lyase [Alteromonas macleodii AltDE1]
Length = 474
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
V++ WFR LR+ DNPAL A + P++IFD
Sbjct: 5 VSIMWFRQDLRVKDNPALNAACDMGKIVPIYIFD 38
>gi|332141440|ref|YP_004427178.1| deoxyribodipyrimidine photo-lyase [Alteromonas macleodii str.
'Deep ecotype']
gi|327551462|gb|AEA98180.1| deoxyribodipyrimidine photo-lyase [Alteromonas macleodii str.
'Deep ecotype']
Length = 474
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
V++ WFR LR+ DNPAL A + P++IFD
Sbjct: 5 VSIMWFRQDLRVKDNPALNAACDMGKIVPIYIFD 38
>gi|305666673|ref|YP_003862960.1| deoxyribodipyrimidine photolyase-class I [Maribacter sp.
HTCC2170]
gi|88707478|gb|EAQ99722.1| deoxyribodipyrimidine photolyase-class I [Maribacter sp.
HTCC2170]
Length = 436
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGE 47
N +++V WFR LRL DN L +A + P+FIFD E
Sbjct: 2 NNKISVFWFRRDLRLEDNTGLLKALQGPTPVLPIFIFDTE 41
>gi|406662067|ref|ZP_11070173.1| Deoxyribodipyrimidine photo-lyase [Cecembia lonarensis LW9]
gi|405554054|gb|EKB49180.1| Deoxyribodipyrimidine photo-lyase [Cecembia lonarensis LW9]
Length = 433
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
K+V++ WFR LRL DN L+ A + + P+FIFD
Sbjct: 2 KKVSIFWFRRDLRLEDNTGLYHAYNQEKNILPIFIFD 38
>gi|302838410|ref|XP_002950763.1| hypothetical protein VOLCADRAFT_37482 [Volvox carteri f.
nagariensis]
gi|300263880|gb|EFJ48078.1| hypothetical protein VOLCADRAFT_37482 [Volvox carteri f.
nagariensis]
Length = 97
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
++ AV WFR+ LRLHDNP L A + PV++ D
Sbjct: 4 RKPAVMWFRNDLRLHDNPVLDRACREGTSVLPVYVLD 40
>gi|147810570|emb|CAN71971.1| hypothetical protein VITISV_015253 [Vitis vinifera]
Length = 641
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
V WFR LR+ DNPAL A+ + PVFI+ + G F
Sbjct: 7 TVVWFRRDLRVDDNPALATAAKEGSVLPVFIWCPKEEGQF 46
>gi|423327855|ref|ZP_17305663.1| hypothetical protein HMPREF9711_01237 [Myroides odoratimimus CCUG
3837]
gi|404605856|gb|EKB05427.1| hypothetical protein HMPREF9711_01237 [Myroides odoratimimus CCUG
3837]
Length = 435
Score = 37.7 bits (86), Expect = 1.00, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
EV V WFR LRL DN A + A+ + + P+FIFD
Sbjct: 5 EVVVVWFRRDLRLEDNVAFYHAAESGYPILPLFIFD 40
>gi|373109790|ref|ZP_09524065.1| hypothetical protein HMPREF9712_01658 [Myroides odoratimimus CCUG
10230]
gi|423131442|ref|ZP_17119117.1| hypothetical protein HMPREF9714_02517 [Myroides odoratimimus CCUG
12901]
gi|423135189|ref|ZP_17122835.1| hypothetical protein HMPREF9715_02610 [Myroides odoratimimus CIP
101113]
gi|371641858|gb|EHO07437.1| hypothetical protein HMPREF9714_02517 [Myroides odoratimimus CCUG
12901]
gi|371643270|gb|EHO08826.1| hypothetical protein HMPREF9715_02610 [Myroides odoratimimus CIP
101113]
gi|371644136|gb|EHO09676.1| hypothetical protein HMPREF9712_01658 [Myroides odoratimimus CCUG
10230]
Length = 435
Score = 37.7 bits (86), Expect = 1.00, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
EV V WFR LRL DN A + A+ + + P+FIFD
Sbjct: 5 EVVVVWFRRDLRLEDNVAFYHAAESGYPILPLFIFD 40
>gi|327342150|gb|AEA50862.1| cry2-1 [Populus tremula]
Length = 84
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYPVFIF 44
+ WFR LR+ DNPAL ++ + ++PVFI+
Sbjct: 7 IVWFRRDLRIEDNPALAASARDGCVFPVFIW 37
>gi|226495065|ref|NP_001144536.1| uncharacterized protein LOC100277533 [Zea mays]
gi|195643560|gb|ACG41248.1| hypothetical protein [Zea mays]
Length = 131
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIF 44
E V WFR LR+ DNPAL A+ + P+FI+
Sbjct: 5 EKTVVWFRRDLRIQDNPALAAAAKGGSVLPIFIW 38
>gi|451847270|gb|EMD60578.1| hypothetical protein COCSADRAFT_244496 [Cochliobolus sativus
ND90Pr]
Length = 654
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 4/39 (10%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
K ++WFR LRLHD+PAL +A+L+ LYPV+ +D
Sbjct: 3 KSRVIYWFRTDLRLHDSPAL-KAALDLDPECLYPVWTWD 40
>gi|254431842|ref|ZP_05045545.1| deoxyribodipyrimidine photolyase [Cyanobium sp. PCC 7001]
gi|197626295|gb|EDY38854.1| deoxyribodipyrimidine photolyase [Cyanobium sp. PCC 7001]
Length = 554
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
V WFR LRL D+PAL +A+ + P+FI D
Sbjct: 5 VVWFRRDLRLGDHPALHQAASEGAVLPLFILD 36
>gi|407700132|ref|YP_006824919.1| deoxyribodipyrimidine photo-lyase [Alteromonas macleodii str.
'Black Sea 11']
gi|407249279|gb|AFT78464.1| deoxyribodipyrimidine photo-lyase [Alteromonas macleodii str.
'Black Sea 11']
Length = 474
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGET 48
V++ WFR LR+ DNPAL A + P++I+D T
Sbjct: 5 VSIMWFRQDLRVKDNPALNAACDMGKIVPIYIYDDTT 41
>gi|42523667|ref|NP_969047.1| deoxyribodipyrimidine photolyase-class I [Bdellovibrio
bacteriovorus HD100]
gi|39575874|emb|CAE80040.1| deoxyribodipyrimidine photolyase-class I [Bdellovibrio
bacteriovorus HD100]
Length = 435
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGE 47
+V + WFR LRL DN L+ A S + P+FIFD E
Sbjct: 3 KVTLFWFRRDLRLDDNAGLYHALKERSAVLPLFIFDSE 40
>gi|413953892|gb|AFW86541.1| hypothetical protein ZEAMMB73_862701 [Zea mays]
Length = 131
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIF 44
E V WFR LR+ DNPAL A+ + P+FI+
Sbjct: 5 EKTVVWFRRDLRIQDNPALAAAAKGGSVLPIFIW 38
>gi|358055721|dbj|GAA98066.1| hypothetical protein E5Q_04748 [Mixia osmundae IAM 14324]
Length = 601
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
Query: 14 VHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
++WFR LRLHD+PAL +A+L+ VL+P + FD
Sbjct: 5 IYWFRTDLRLHDSPAL-QAALDLKPDVLFPTWCFD 38
>gi|209965317|ref|YP_002298232.1| deoxyribodipyrimidine photolyase family protein [Rhodospirillum
centenum SW]
gi|209958783|gb|ACI99419.1| deoxyribodipyrimidine photolyase family protein [Rhodospirillum
centenum SW]
Length = 489
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 16 WFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAG 50
WFR LRL DNPAL +A+ + + PVF+ D +T G
Sbjct: 9 WFRQDLRLADNPALSDAARSGRPVVPVFVLDDDTPG 44
>gi|189188250|ref|XP_001930464.1| cryptochrome-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972070|gb|EDU39569.1| cryptochrome-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 655
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEA-SLN-SVLYPVFIFD 45
+K ++WFR LRLHD+PAL A LN + LYP++ +D
Sbjct: 2 SKPRVIYWFRTDLRLHDSPALKAALDLNPACLYPIWTWD 40
>gi|374594255|ref|ZP_09667260.1| DNA photolyase FAD-binding [Gillisia limnaea DSM 15749]
gi|373872330|gb|EHQ04327.1| DNA photolyase FAD-binding [Gillisia limnaea DSM 15749]
Length = 434
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGE 47
+++V+V WFR LRL DN EA + + + P+FIFD E
Sbjct: 2 SEKVSVFWFRRDLRLDDNVGFLEALKSDLPVLPIFIFDTE 41
>gi|224068346|ref|XP_002302716.1| predicted protein [Populus trichocarpa]
gi|222844442|gb|EEE81989.1| predicted protein [Populus trichocarpa]
Length = 471
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 2 DTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAG 50
D N+ + + WFR+ LR+HDN L A+ +S+ + PV+ FD G
Sbjct: 115 DPSNAAGTRRACIVWFRNDLRVHDNECLNSANNDSMSVLPVYCFDPRDYG 164
>gi|15824993|gb|AAL09564.1|AF363633_1 cryptochrome 2 [Coturnix japonica]
Length = 49
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 15 HWFRHGLRLHDNPALFEASLNSV--LYPVFIFD 45
HWFR GLRLHDNPAL +A+L + ++I D
Sbjct: 3 HWFRRGLRLHDNPAL-QAALRGAASIRCIYILD 34
>gi|255533599|ref|YP_003093971.1| DASH family cryptochrome [Pedobacter heparinus DSM 2366]
gi|255346583|gb|ACU05909.1| cryptochrome, DASH family [Pedobacter heparinus DSM 2366]
Length = 430
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
NK++ V WFR+ LRLHDN L EA S + PV+ FD
Sbjct: 3 NKKILV-WFRNDLRLHDNEMLVEAIAKSDSILPVYFFD 39
>gi|206891163|ref|YP_002248985.1| deoxyribodipyrimidine photo-lyase [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206743101|gb|ACI22158.1| deoxyribodipyrimidine photo-lyase [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 437
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSV-LYPVFIF 44
+ WF+ LR+ DN ALFEA NS + PVFIF
Sbjct: 6 IFWFKRDLRIDDNRALFEACQNSFEVIPVFIF 37
>gi|335043044|ref|ZP_08536071.1| deoxyribodipyrimidine photolyase [Methylophaga aminisulfidivorans
MP]
gi|333789658|gb|EGL55540.1| deoxyribodipyrimidine photolyase [Methylophaga aminisulfidivorans
MP]
Length = 441
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLN-SVLYPVFIFD 45
+ ++W +H LR+HDN AL EASLN L ++ FD
Sbjct: 3 KTGLYWIQHDLRIHDNAALLEASLNCEQLICLYCFD 38
>gi|134082999|emb|CAK42762.1| unnamed protein product [Aspergillus niger]
Length = 567
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 7 PNNKEVAVHWFRHGLRLHDNPALFEA-SLN-SVLYPVFIFDGETA 49
P + + W R LRLHDNPAL A SLN S P+F +D A
Sbjct: 3 PQSAPTVIFWHRTDLRLHDNPALQAALSLNPSTFIPIFTWDPHYA 47
>gi|6594298|dbj|BAA88424.1| blue light photoreceptor [Adiantum capillus-veneris]
gi|6594302|dbj|BAA88426.1| blue light photoreceptor [Adiantum capillus-veneris]
Length = 487
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEAS-LNSVLYPVFIFDGETAGLF 52
+ W R LRL DNPAL EAS + + + PVF++ E G F
Sbjct: 5 TTIVWLRRDLRLDDNPALKEASKIGNAVVPVFVWVPEEEGQF 46
>gi|300774220|ref|ZP_07084087.1| possible deoxyribodipyrimidine photo-lyase [Sphingobacterium
spiritivorum ATCC 33861]
gi|300758899|gb|EFK55728.1| possible deoxyribodipyrimidine photo-lyase [Sphingobacterium
spiritivorum ATCC 33861]
Length = 437
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNS--VLYPVFIFDG 46
+ WFR LRL DN ALF A LNS + PVFIFD
Sbjct: 6 TVIFWFRRDLRLQDNHALFRA-LNSEAAVQPVFIFDS 41
>gi|317036499|ref|XP_001397458.2| DNA photolyase [Aspergillus niger CBS 513.88]
Length = 641
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 7 PNNKEVAVHWFRHGLRLHDNPALFEA-SLN-SVLYPVFIFDGETA 49
P + + W R LRLHDNPAL A SLN S P+F +D A
Sbjct: 3 PQSAPTVIFWHRTDLRLHDNPALQAALSLNPSTFIPIFTWDPHYA 47
>gi|147827517|emb|CAN66342.1| hypothetical protein VITISV_024326 [Vitis vinifera]
Length = 1716
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 5 NSPNNKEVAVHWFRHGLRLHDNPALF-EASLNSVLYPVFIFD 45
+S + VAV WF+H LR+ D+P L AS + + P+++FD
Sbjct: 948 SSAIDDSVAVLWFKHDLRIDDHPGLVAAASRHRTVIPLYVFD 989
>gi|300771338|ref|ZP_07081214.1| cryptochrome DASH [Sphingobacterium spiritivorum ATCC 33861]
gi|300762008|gb|EFK58828.1| cryptochrome DASH [Sphingobacterium spiritivorum ATCC 33861]
Length = 425
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
+V + WFR+ LR HDN LFE S + ++ PV+ FD
Sbjct: 4 KVTLIWFRNDLRFHDNEILFETVSKSPIIIPVYCFD 39
>gi|227540558|ref|ZP_03970607.1| deoxyribodipyrimidine photolyase [Sphingobacterium spiritivorum
ATCC 33300]
gi|227239640|gb|EEI89655.1| deoxyribodipyrimidine photolyase [Sphingobacterium spiritivorum
ATCC 33300]
Length = 425
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
+V + WFR+ LR HDN LFE S + ++ PV+ FD
Sbjct: 4 KVTLIWFRNDLRFHDNEILFETVSKSPIIIPVYCFD 39
>gi|221134512|ref|ZP_03560817.1| DNA photolyase [Glaciecola sp. HTCC2999]
Length = 487
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 12 VAVHWFRHGLRLHDNPALFE----ASLNSVLYPVFIFDGETAGL 51
+ + WFRH LRL+DNPAL+ A + + P+FI D L
Sbjct: 5 LVIMWFRHDLRLNDNPALYRAIELAGEHGTVLPIFIHDTSAPDL 48
>gi|452848446|gb|EME50378.1| hypothetical protein DOTSEDRAFT_145202, partial [Dothistroma
septosporum NZE10]
Length = 640
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 29/40 (72%), Gaps = 4/40 (10%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
+K ++WFR LRLHD+PAL +A+L+ VL+P++ +D
Sbjct: 2 SKPRVIYWFRTDLRLHDSPAL-KAALDLKPDVLFPIWCWD 40
>gi|145881069|gb|ABP97098.1| cryptochrome CRY1 [Acropora millepora]
Length = 552
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
A+HW R LRLHDNP+L EA S + +++ D
Sbjct: 29 AIHWVRKDLRLHDNPSLLEAVKGSDTVRIIYVLD 62
>gi|384045337|ref|YP_005493354.1| Deoxyribodipyrimidine photolyase family protein [Bacillus
megaterium WSH-002]
gi|345443028|gb|AEN88045.1| Deoxyribodipyrimidine photolyase family protein [Bacillus
megaterium WSH-002]
Length = 475
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGE 47
K+ + W R RL DNPALF A+ ++ PV+I D +
Sbjct: 2 KKTIIVWIRKDFRLVDNPALFHAAKEGMVVPVYIHDDD 39
>gi|242060916|ref|XP_002451747.1| hypothetical protein SORBIDRAFT_04g007140 [Sorghum bicolor]
gi|241931578|gb|EES04723.1| hypothetical protein SORBIDRAFT_04g007140 [Sorghum bicolor]
Length = 550
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 7/37 (18%)
Query: 16 WFRHGLRLHDNPALFEASLNSV-------LYPVFIFD 45
WFR GLR+HDNPAL A LYPVF+ D
Sbjct: 13 WFRKGLRVHDNPALDAARRYGAGAASARRLYPVFVLD 49
>gi|407781615|ref|ZP_11128833.1| deoxyribodipyrimidine photolyase family protein [Oceanibaculum
indicum P24]
gi|407207832|gb|EKE77763.1| deoxyribodipyrimidine photolyase family protein [Oceanibaculum
indicum P24]
Length = 497
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 16 WFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAGLF 52
WFR LRL DNPAL A + PV+I D ET G +
Sbjct: 25 WFRQDLRLADNPALRAAVESGQPILPVYILDDETPGAW 62
>gi|408372276|ref|ZP_11170016.1| deoxyribodipyrimidine photo-lyase [Galbibacter sp. ck-I2-15]
gi|407742292|gb|EKF53899.1| deoxyribodipyrimidine photo-lyase [Galbibacter sp. ck-I2-15]
Length = 435
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
+V+V WFR LRL DN L+ A + ++P+FIFD
Sbjct: 4 KVSVFWFRRDLRLEDNVGLYHALASEFPVFPIFIFD 39
>gi|118484811|gb|ABK94273.1| unknown [Populus trichocarpa]
Length = 457
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 2 DTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAG 50
D N+ + + WFR+ LR+HDN L A+ +S+ + PV+ FD G
Sbjct: 115 DPSNAAGTRRACIVWFRNDLRVHDNECLNSANNDSMSVLPVYCFDPRDYG 164
>gi|307110914|gb|EFN59149.1| hypothetical protein CHLNCDRAFT_56756 [Chlorella variabilis]
Length = 444
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 4 PNSPNNKEVAVHWFRHGLRLHDNPALFEASLN-SVLYPVFIFDGETAG 50
P + + WFR LRLHDN AL A S L PV+ FD G
Sbjct: 101 PGCGAGRRPGIVWFRGDLRLHDNEALARAQAECSSLLPVYCFDPREYG 148
>gi|269961334|ref|ZP_06175699.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833885|gb|EEZ87979.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 462
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEAS 33
NK + ++WF + LRLHDNP L AS
Sbjct: 14 NKTIGLYWFTNDLRLHDNPLLLRAS 38
>gi|413953893|gb|AFW86542.1| hypothetical protein ZEAMMB73_862701 [Zea mays]
Length = 654
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIF 44
E V WFR LR+ DNPAL A+ + P+FI+
Sbjct: 5 EKTVVWFRRDLRIQDNPALAAAAKGGSVLPIFIW 38
>gi|149375532|ref|ZP_01893302.1| Deoxyribodipyrimidine photolyase [Marinobacter algicola DG893]
gi|149360237|gb|EDM48691.1| Deoxyribodipyrimidine photolyase [Marinobacter algicola DG893]
Length = 440
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
V+++WF LRLHDN AL AS + +L V++ D
Sbjct: 2 VSLYWFTRDLRLHDNAALLAASKSDMLLCVYVVD 35
>gi|413953894|gb|AFW86543.1| hypothetical protein ZEAMMB73_862701 [Zea mays]
Length = 632
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIF 44
E V WFR LR+ DNPAL A+ + P+FI+
Sbjct: 5 EKTVVWFRRDLRIQDNPALAAAAKGGSVLPIFIW 38
>gi|357150246|ref|XP_003575393.1| PREDICTED: cryptochrome-2-like [Brachypodium distachyon]
Length = 637
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
E + WFR LR+ DNPAL A+ + + P+FI+ G F
Sbjct: 5 ERTIVWFRRDLRIDDNPALAAAARDGSVLPIFIWCPADEGQF 46
>gi|345570555|gb|EGX53376.1| hypothetical protein AOL_s00006g242 [Arthrobotrys oligospora ATCC
24927]
Length = 637
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLN-SVLYPVFIFD 45
++WFR LRLHD+PAL A LN V YPV+ +D
Sbjct: 6 LYWFRTDLRLHDSPALKAALDLNPDVFYPVWTWD 39
>gi|396460940|ref|XP_003835082.1| hypothetical protein LEMA_P072250.1 [Leptosphaeria maculans JN3]
gi|312211632|emb|CBX91717.1| hypothetical protein LEMA_P072250.1 [Leptosphaeria maculans JN3]
Length = 709
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 4/40 (10%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
+K ++WFR LRLHD+PAL +A+L+ LYP++ +D
Sbjct: 48 SKPRVIYWFRTDLRLHDSPAL-KAALDLKPDCLYPIWTWD 86
>gi|260062651|ref|YP_003195731.1| deoxyribodipyrimidine photolyase-class I [Robiginitalea biformata
HTCC2501]
gi|88784218|gb|EAR15388.1| deoxyribodipyrimidine photolyase-class I [Robiginitalea biformata
HTCC2501]
Length = 434
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGE 47
K V + WFR LRL DN L EA + P+FIFD E
Sbjct: 3 KSVNIFWFRRDLRLEDNRGLCEALGAGRPVLPIFIFDSE 41
>gi|330915233|ref|XP_003296949.1| hypothetical protein PTT_07199 [Pyrenophora teres f. teres 0-1]
gi|311330639|gb|EFQ94953.1| hypothetical protein PTT_07199 [Pyrenophora teres f. teres 0-1]
Length = 655
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLN-SVLYPVFIFD 45
++WFR LRLHD+PAL A LN + LYP++ +D
Sbjct: 7 IYWFRTDLRLHDSPALKAALDLNPTCLYPIWTWD 40
>gi|225437398|ref|XP_002270248.1| PREDICTED: blue-light photoreceptor PHR2 [Vitis vinifera]
Length = 454
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 2 DTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAG 50
D N+ + + WFR+ LR+HDN L AS S+ + PV+ FD G
Sbjct: 109 DPSNAAGIRRSCIVWFRNDLRVHDNECLNSASNESMSMLPVYCFDPRDYG 158
>gi|109896483|ref|YP_659738.1| deoxyribodipyrimidine photolyase [Pseudoalteromonas atlantica
T6c]
gi|109698764|gb|ABG38684.1| deoxyribodipyrimidine photo-lyase (single-stranded DNA-specific)
[Pseudoalteromonas atlantica T6c]
Length = 445
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLN-SVLYPVFIFD 45
+ WFRH LRLHDNPAL S L VFI D
Sbjct: 12 GIFWFRHDLRLHDNPALVALSEQVDELLCVFIID 45
>gi|402823473|ref|ZP_10872896.1| deoxyribodipyrimidine photo-lyase [Sphingomonas sp. LH128]
gi|402262964|gb|EJU12904.1| deoxyribodipyrimidine photo-lyase [Sphingomonas sp. LH128]
Length = 455
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGET 48
W R LRL D PA+ EA+ + PV+I D ET
Sbjct: 8 WLRRDLRLSDQPAIAEAARKGPVIPVYILDDET 40
>gi|365877752|ref|ZP_09417247.1| deoxyribodipyrimidine photo-lyase [Elizabethkingia anophelis Ag1]
gi|442589479|ref|ZP_21008287.1| deoxyribodipyrimidine photo-lyase [Elizabethkingia anophelis R26]
gi|365754465|gb|EHM96409.1| deoxyribodipyrimidine photo-lyase [Elizabethkingia anophelis Ag1]
gi|442561089|gb|ELR78316.1| deoxyribodipyrimidine photo-lyase [Elizabethkingia anophelis R26]
Length = 432
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
+V V+WFR LRL DN L +A + + + PVFIFD
Sbjct: 4 KVVVYWFRRDLRLEDNKGLQQALASGLPVLPVFIFD 39
>gi|407775677|ref|ZP_11122970.1| deoxyribodipyrimidine photo-lyase type I [Thalassospira
profundimaris WP0211]
gi|407281354|gb|EKF06917.1| deoxyribodipyrimidine photo-lyase type I [Thalassospira
profundimaris WP0211]
Length = 492
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEASL-----NSVLYPVFIFD 45
+ +AV WFR+ LRL DNPAL A + + PVFI D
Sbjct: 2 TERPIAVMWFRNDLRLADNPALLAAVKWAKENDGAVLPVFILD 44
>gi|451997801|gb|EMD90266.1| hypothetical protein COCHEDRAFT_1139413, partial [Cochliobolus
heterostrophus C5]
Length = 650
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
Query: 14 VHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
++WFR LRLHD+PAL +A+L+ LYPV+ +D
Sbjct: 7 IYWFRTDLRLHDSPAL-KAALDLDPECLYPVWTWD 40
>gi|146276865|ref|YP_001167024.1| deoxyribodipyrimidine photo-lyase [Rhodobacter sphaeroides ATCC
17025]
gi|145555106|gb|ABP69719.1| Deoxyribodipyrimidine photo-lyase type I [Rhodobacter sphaeroides
ATCC 17025]
Length = 470
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAGL 51
+ WFR LRL DNP + EA+ L PVFI D ET L
Sbjct: 7 ILWFRRDLRLTDNPMVREAAATGRPLVPVFILDPETERL 45
>gi|145346348|ref|XP_001417651.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577879|gb|ABO95944.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 562
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 1 MDTPNSPNNKEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
M P+ N ++ WFR LR+HDNPAL + PVF+ D
Sbjct: 1 MTAPSVSNGTTRSLIWFRKALRVHDNPALAAGIARAKSAQPVFVLD 46
>gi|344204249|ref|YP_004789392.1| deoxyribodipyrimidine photo-lyase [Muricauda ruestringensis DSM
13258]
gi|343956171|gb|AEM71970.1| Deoxyribodipyrimidine photo-lyase [Muricauda ruestringensis DSM
13258]
Length = 437
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGE 47
+V + WFR LRL DN ++A N V + P+FIFD E
Sbjct: 4 KVILFWFRRDLRLDDNVGFYQALQNDVPVLPLFIFDTE 41
>gi|294500818|ref|YP_003564518.1| FAD binding domain of DNA photolyase [Bacillus megaterium QM
B1551]
gi|294350755|gb|ADE71084.1| FAD binding domain of DNA photolyase [Bacillus megaterium QM
B1551]
Length = 475
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
NK + V W R RL DNPALF A+ ++ PV+I D
Sbjct: 2 NKTIIV-WIRKDFRLVDNPALFHAAKEGMVVPVYIHD 37
>gi|295706162|ref|YP_003599237.1| FAD binding domain of DNA photolyase [Bacillus megaterium DSM
319]
gi|294803821|gb|ADF40887.1| FAD binding domain of DNA photolyase [Bacillus megaterium DSM
319]
Length = 475
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
NK + V W R RL DNPALF A+ ++ PV+I D
Sbjct: 2 NKTIIV-WIRKDFRLVDNPALFHAAKEGMVVPVYIHD 37
>gi|254504495|ref|ZP_05116646.1| deoxyribodipyrimidine photolyase family [Labrenzia alexandrii
DFL-11]
gi|222440566|gb|EEE47245.1| deoxyribodipyrimidine photolyase family [Labrenzia alexandrii
DFL-11]
Length = 478
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
+ WFR LR+ DNPAL EA+ + PV+I +
Sbjct: 2 TTIVWFRQDLRVSDNPALHEATRRGPVLPVYILE 35
>gi|167736303|dbj|BAG07408.1| cryptochrome-m [Riptortus pedestris]
Length = 538
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 15/17 (88%)
Query: 13 AVHWFRHGLRLHDNPAL 29
VHWFR GLRLHDNP+L
Sbjct: 6 TVHWFRKGLRLHDNPSL 22
>gi|16125677|ref|NP_420241.1| deoxyribodipyrimidine photolyase [Caulobacter crescentus CB15]
gi|221234432|ref|YP_002516868.1| deoxyribodipyrimidine photolyase [Caulobacter crescentus NA1000]
gi|13422791|gb|AAK23409.1| deoxyribodipyrimidine photolyase - classI [Caulobacter crescentus
CB15]
gi|220963604|gb|ACL94960.1| deoxyribodipyrimidine photolyase [Caulobacter crescentus NA1000]
Length = 483
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 2 DTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAGL 51
D+ +S N + + WFR LR+ DNPAL A+ + + P++I D ET G+
Sbjct: 6 DSGDSKANLDAVIVWFRKDLRIADNPALRHAAQSGRPVIPLYILD-ETPGI 55
>gi|85816726|gb|EAQ37912.1| deoxyribodipyrimidine photo-lyase, class I [Dokdonia donghaensis
MED134]
Length = 436
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGE 47
+ K+V + WFR LRL DN EA + + P+FIFD E
Sbjct: 2 STKKVTIFWFRRDLRLDDNVGFLEALKGDYPVLPIFIFDKE 42
>gi|3551221|dbj|BAA32809.1| blue-light photoreceptor [Adiantum capillus-veneris]
gi|3551227|dbj|BAA32812.1| blue-light photoreceptor [Adiantum capillus-veneris]
Length = 718
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
K V WFR LRL DNPAL A+ + PVFI+ + G F
Sbjct: 3 KSCTVVWFRRDLRLEDNPALAAAARAGAVVPVFIWSPDEEGQF 45
>gi|402851511|ref|ZP_10899666.1| Deoxyribodipyrimidine photolyase [Rhodovulum sp. PH10]
gi|402498244|gb|EJW10001.1| Deoxyribodipyrimidine photolyase [Rhodovulum sp. PH10]
Length = 493
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 1 MDTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAGL 51
M +P++ N + WFR LR+ D+PAL A+ + + +F+ D E+ GL
Sbjct: 1 MTSPDTSKNPPAVLVWFRDDLRVADHPALDSAARKGLPVAALFVLDEESPGL 52
>gi|302765677|ref|XP_002966259.1| hypothetical protein SELMODRAFT_85247 [Selaginella
moellendorffii]
gi|300165679|gb|EFJ32286.1| hypothetical protein SELMODRAFT_85247 [Selaginella
moellendorffii]
Length = 345
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAG 50
+ ++ WFR+ LR+HDN AL A+ S+ + PV+ FD + G
Sbjct: 19 RRASIVWFRNDLRVHDNEALAAANKESLSVIPVYCFDPKDYG 60
>gi|325285379|ref|YP_004261169.1| deoxyribodipyrimidine photo-lyase [Cellulophaga lytica DSM 7489]
gi|324320833|gb|ADY28298.1| Deoxyribodipyrimidine photo-lyase [Cellulophaga lytica DSM 7489]
Length = 429
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 11 EVAVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFD 45
+++V WFR LR+ DN AL A S N VL PVFIFD
Sbjct: 4 KISVFWFRRDLRIEDNTALCNALKSGNPVL-PVFIFD 39
>gi|313228844|emb|CBY17995.1| unnamed protein product [Oikopleura dioica]
Length = 525
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGE 47
+HWFR GLRLHDN L A +S +Y V+ D E
Sbjct: 11 LHWFRKGLRLHDNRPLLAAIRSSEAVYCVYCLDLE 45
>gi|375014151|ref|YP_004991139.1| deoxyribodipyrimidine photolyase [Owenweeksia hongkongensis DSM
17368]
gi|359350075|gb|AEV34494.1| deoxyribodipyrimidine photolyase [Owenweeksia hongkongensis DSM
17368]
Length = 435
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
+ +++ + WFR LRL+DN L+ A + + + PVFIFD
Sbjct: 2 SEEKICIFWFRRDLRLNDNAGLYRALTSGLKVLPVFIFD 40
>gi|326799093|ref|YP_004316912.1| deoxyribodipyrimidine photo-lyase [Sphingobacterium sp. 21]
gi|326549857|gb|ADZ78242.1| Deoxyribodipyrimidine photo-lyase [Sphingobacterium sp. 21]
Length = 437
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
+ WFR LRL DN AL+EA + + PVFIFD
Sbjct: 9 IFWFRRDLRLQDNHALYEALRSGYKVQPVFIFD 41
>gi|302793095|ref|XP_002978313.1| hypothetical protein SELMODRAFT_108462 [Selaginella
moellendorffii]
gi|300154334|gb|EFJ20970.1| hypothetical protein SELMODRAFT_108462 [Selaginella
moellendorffii]
Length = 345
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAG 50
+ ++ WFR+ LR+HDN AL A+ S+ + PV+ FD + G
Sbjct: 19 RRASIVWFRNDLRVHDNEALAAANKESLSVIPVYCFDPKDYG 60
>gi|225010806|ref|ZP_03701274.1| Deoxyribodipyrimidine photo-lyase [Flavobacteria bacterium
MS024-3C]
gi|225005014|gb|EEG42968.1| Deoxyribodipyrimidine photo-lyase [Flavobacteria bacterium
MS024-3C]
Length = 438
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLN-SVLYPVFIFDGE 47
+E+ + WFR LR +DN L +A L+ + P+FIFD E
Sbjct: 2 KEEIVIFWFRRDLRYNDNTGLSKALLSGKKVLPIFIFDTE 41
>gi|307945306|ref|ZP_07660642.1| cryptochrome-2 [Roseibium sp. TrichSKD4]
gi|307771179|gb|EFO30404.1| cryptochrome-2 [Roseibium sp. TrichSKD4]
Length = 486
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
++ WFR LR+ DN AL+ A+ + PVFI+D
Sbjct: 9 TSIVWFRQDLRVADNAALYHAAQEGPVIPVFIWD 42
>gi|374289278|ref|YP_005036363.1| putative deoxyribodipyrimidine photolyase [Bacteriovorax marinus
SJ]
gi|301167819|emb|CBW27403.1| putative deoxyribodipyrimidine photolyase [Bacteriovorax marinus
SJ]
Length = 434
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEASLNSV--LYPVFIFD 45
N +V++ WFR LR+ DN L+ A LNS + P+FIFD
Sbjct: 4 NKDKVSIFWFRRDLRVEDNIGLYHA-LNSSFPVLPIFIFD 42
>gi|343403561|dbj|BAK61603.1| cryptochrome2c [Glycine soja]
Length = 413
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
+ WFR LR+ DNPAL A+ + PV+I+ + G F
Sbjct: 6 TIVWFRRDLRIEDNPALAAAAKEGSVLPVYIWCPKEEGQF 45
>gi|425767796|gb|EKV06352.1| DNA photolyase, putative [Penicillium digitatum Pd1]
gi|425769478|gb|EKV07970.1| DNA photolyase, putative [Penicillium digitatum PHI26]
Length = 604
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 7 PNNKEVAVHWFRHGLRLHDNPALFEA-SLN-SVLYPVFIFD 45
P + V ++W R LRLHD+PAL A +LN SV P++ +D
Sbjct: 5 PGSNPVVLYWHRTDLRLHDSPALHAALALNPSVFIPIWTWD 45
>gi|408675634|ref|YP_006875382.1| DNA photolyase FAD-binding protein [Emticicia oligotrophica DSM
17448]
gi|387857258|gb|AFK05355.1| DNA photolyase FAD-binding protein [Emticicia oligotrophica DSM
17448]
Length = 437
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
+++A+ WFR LRL+DN L+ A + + P+FIFD
Sbjct: 4 EKIAIFWFRRDLRLNDNAGLYHALRSGYKVLPIFIFD 40
>gi|343403557|dbj|BAK61601.1| cryptochrome2c [Glycine soja]
Length = 413
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
+ WFR LR+ DNPAL A+ + PV+I+ + G F
Sbjct: 6 TIVWFRRDLRIEDNPALAAAAKEGSVLPVYIWCPKEEGQF 45
>gi|343403555|dbj|BAK61600.1| cryptochrome2c [Glycine soja]
gi|343403559|dbj|BAK61602.1| cryptochrome2c [Glycine soja]
gi|343403563|dbj|BAK61604.1| cryptochrome2c [Glycine soja]
Length = 413
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
+ WFR LR+ DNPAL A+ + PV+I+ + G F
Sbjct: 6 TIVWFRRDLRIEDNPALAAAAKEGSVLPVYIWCPKEEGQF 45
>gi|302814412|ref|XP_002988890.1| hypothetical protein SELMODRAFT_967 [Selaginella moellendorffii]
gi|300143461|gb|EFJ10152.1| hypothetical protein SELMODRAFT_967 [Selaginella moellendorffii]
Length = 489
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 16 WFRHGLRLHDNPALFEASL--NSVLYPVFIFDGETAGLF 52
WFR LRL DNPAL A S++ PVF++ E G F
Sbjct: 7 WFRRDLRLDDNPALAAAVARKGSIVVPVFVWCPEEEGQF 45
>gi|94501522|ref|ZP_01308040.1| Deoxyribodipyrimidine photolyase [Bermanella marisrubri]
gi|94426340|gb|EAT11330.1| Deoxyribodipyrimidine photolyase [Oceanobacter sp. RED65]
Length = 478
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 14/20 (70%), Positives = 15/20 (75%)
Query: 16 WFRHGLRLHDNPALFEASLN 35
WFR LR+HDNPALF A N
Sbjct: 8 WFRRDLRVHDNPALFHAMKN 27
>gi|209364020|ref|YP_002268317.1| deoxyribodipyrimidine photolyase [Coxiella burnetii Dugway
5J108-111]
gi|207081953|gb|ACI23155.1| deoxyribodipyrimidine photolyase [Coxiella burnetii Dugway
5J108-111]
Length = 452
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGE 47
+ WFR LRL DNPAL EA+ ++ L P++I D +
Sbjct: 4 IFWFRQDLRLSDNPALVEAAKSADHLIPLYILDDQ 38
>gi|406596893|ref|YP_006748023.1| deoxyribodipyrimidine photo-lyase [Alteromonas macleodii ATCC
27126]
gi|406374214|gb|AFS37469.1| deoxyribodipyrimidine photo-lyase [Alteromonas macleodii ATCC
27126]
Length = 474
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
V++ WFR LR+ DNPAL A + P++I+D
Sbjct: 5 VSIMWFRQDLRVKDNPALNAACDMGKIVPIYIYD 38
>gi|407683884|ref|YP_006799058.1| deoxyribodipyrimidine photo-lyase [Alteromonas macleodii str.
'English Channel 673']
gi|407245495|gb|AFT74681.1| deoxyribodipyrimidine photo-lyase [Alteromonas macleodii str.
'English Channel 673']
Length = 474
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
V++ WFR LR+ DNPAL A + P++I+D
Sbjct: 5 VSIMWFRQDLRVKDNPALNAACDMGKIVPIYIYD 38
>gi|409098421|ref|ZP_11218445.1| DASH family cryptochrome [Pedobacter agri PB92]
Length = 424
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
+K++ V WFR+ LRLHDN L EA S + + PV+I D + G
Sbjct: 2 SKKILV-WFRNDLRLHDNEMLVEAISKSDSILPVYILDPRSFG 43
>gi|407687838|ref|YP_006803011.1| deoxyribodipyrimidine photo-lyase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291218|gb|AFT95530.1| deoxyribodipyrimidine photo-lyase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 476
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
V++ WFR LR+ DNPAL A + P++I+D
Sbjct: 5 VSIMWFRQDLRVKDNPALNAACDMGKIVPIYIYD 38
>gi|343429136|emb|CBQ72710.1| related to Deoxyribodipyrimidine photolyase [Sporisorium
reilianum SRZ2]
Length = 684
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 27/35 (77%), Gaps = 4/35 (11%)
Query: 14 VHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
++WFR LRLHD+PAL +A+L+ + L+PV+ +D
Sbjct: 8 LYWFRTDLRLHDSPAL-QAALDLKPAALFPVWCWD 41
>gi|359477655|ref|XP_002285169.2| PREDICTED: cryptochrome-2-like [Vitis vinifera]
gi|296083651|emb|CBI23640.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
V WFR LR+ DNPAL A+ + PVFI+ + G F
Sbjct: 8 VVWFRRDLRVDDNPALATAAKEGSVLPVFIWCPKEEGQF 46
>gi|153209159|ref|ZP_01947255.1| deoxyribodipyrimidine photolyase [Coxiella burnetii 'MSU Goat
Q177']
gi|212218603|ref|YP_002305390.1| deoxyribodipyrimidine photolyase [Coxiella burnetii CbuK_Q154]
gi|120575482|gb|EAX32106.1| deoxyribodipyrimidine photolyase [Coxiella burnetii 'MSU Goat
Q177']
gi|212012865|gb|ACJ20245.1| deoxyribodipyrimidine photolyase [Coxiella burnetii CbuK_Q154]
Length = 472
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGE 47
+ WFR LRL DNPAL EA+ ++ L P++I D +
Sbjct: 4 IFWFRQDLRLSDNPALVEAAKSADHLIPLYILDDQ 38
>gi|410626719|ref|ZP_11337472.1| cryptochrome DASH [Glaciecola mesophila KMM 241]
gi|410153820|dbj|GAC24241.1| cryptochrome DASH [Glaciecola mesophila KMM 241]
Length = 433
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPALFEASLN-SVLYPVFIFD 45
WFRH LRLHDNPAL S L VFI D
Sbjct: 15 WFRHDLRLHDNPALVALSEQVDELLCVFIID 45
>gi|29654479|ref|NP_820171.1| deoxyribodipyrimidine photolyase [Coxiella burnetii RSA 493]
gi|212212435|ref|YP_002303371.1| deoxyribodipyrimidine photolyase [Coxiella burnetii CbuG_Q212]
gi|29541746|gb|AAO90685.1| deoxyribodipyrimidine photolyase [Coxiella burnetii RSA 493]
gi|212010845|gb|ACJ18226.1| deoxyribodipyrimidine photolyase [Coxiella burnetii CbuG_Q212]
Length = 472
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFDGE 47
+ WFR LRL DNPAL EA+ ++ L P++I D +
Sbjct: 4 IFWFRQDLRLSDNPALVEAAKSADHLIPLYILDDQ 38
>gi|71009567|ref|XP_758291.1| hypothetical protein UM02144.1 [Ustilago maydis 521]
gi|46098033|gb|EAK83266.1| hypothetical protein UM02144.1 [Ustilago maydis 521]
Length = 684
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 27/35 (77%), Gaps = 4/35 (11%)
Query: 14 VHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
++WFR LRLHD+PAL +A+L+ + L+PV+ +D
Sbjct: 8 LYWFRTDLRLHDSPAL-QAALDLKPAALFPVWCWD 41
>gi|124006560|ref|ZP_01691393.1| deoxyribodipyrimidine photolyase [Microscilla marina ATCC 23134]
gi|123987973|gb|EAY27653.1| deoxyribodipyrimidine photolyase [Microscilla marina ATCC 23134]
Length = 483
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 1 MDTPNSPNN--KEVAVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
M+ NN +V + WFR+ LR+HDN L +A+ ++ L PV+ FD
Sbjct: 1 MENKQKINNLRTQVKIVWFRNDLRVHDNDVLAKAASDADYLLPVYCFD 48
>gi|359490262|ref|XP_002265202.2| PREDICTED: uncharacterized protein LOC100259267 [Vitis vinifera]
Length = 722
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 5 NSPNNKEVAVHWFRHGLRLHDNPALF-EASLNSVLYPVFIFDGETAGLF 52
+S + VAV WF+H LR+ D+P L AS + + P+++FD F
Sbjct: 56 SSAIDDSVAVLWFKHDLRIDDHPGLVAAASRHRTVIPLYVFDRRILSRF 104
>gi|350633368|gb|EHA21733.1| Hypothetical protein ASPNIDRAFT_184343 [Aspergillus niger ATCC
1015]
Length = 640
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 7 PNNKEVAVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFDGETA 49
P + V W R LRLHDNPAL +A+L+ S P+F +D A
Sbjct: 3 PQSAPTVVFWHRTDLRLHDNPAL-QAALSLKPSTFIPIFTWDPHYA 47
>gi|443894766|dbj|GAC72113.1| deoxyribodipyrimidine photolyase [Pseudozyma antarctica T-34]
Length = 685
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 27/35 (77%), Gaps = 4/35 (11%)
Query: 14 VHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
++WFR LRLHD+PAL +A+L+ + L+PV+ +D
Sbjct: 8 LYWFRTDLRLHDSPAL-QAALDLKPAALFPVWCWD 41
>gi|254418176|ref|ZP_05031900.1| deoxyribodipyrimidine photolyase family [Brevundimonas sp. BAL3]
gi|196184353|gb|EDX79329.1| deoxyribodipyrimidine photolyase family [Brevundimonas sp. BAL3]
Length = 488
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
V WFR LRL+DNPAL+ A + + PVFI D
Sbjct: 12 VLWFRRDLRLNDNPALYHAVATGRPILPVFILD 44
>gi|150025093|ref|YP_001295919.1| deoxyribodipyrimidine photolyase PhrB1 [Flavobacterium
psychrophilum JIP02/86]
gi|149771634|emb|CAL43108.1| Deoxyribodipyrimidine photolyase PhrB1 [Flavobacterium
psychrophilum JIP02/86]
Length = 428
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS--VLYPVFIFD 45
+ WFR LRL DN LF A LNS + P+FIFD
Sbjct: 3 IFWFRRDLRLDDNVGLFHA-LNSDQTILPIFIFD 35
>gi|392391321|ref|YP_006427924.1| deoxyribodipyrimidine photolyase [Ornithobacterium rhinotracheale
DSM 15997]
gi|390522399|gb|AFL98130.1| deoxyribodipyrimidine photolyase [Ornithobacterium rhinotracheale
DSM 15997]
Length = 457
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGE 47
K+ +HWFR LRL DN AL A + + + +FIFD E
Sbjct: 24 KDYVIHWFRRDLRLKDNTALHHAIQHKIPVKCIFIFDTE 62
>gi|383807330|ref|ZP_09962890.1| deoxyribodipyrimidine photo-lyase [Candidatus Aquiluna sp.
IMCC13023]
gi|383298684|gb|EIC91299.1| deoxyribodipyrimidine photo-lyase [Candidatus Aquiluna sp.
IMCC13023]
Length = 441
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 14 VHWFRHGLRLHDNPAL-FEASLNSVLYPVFIFDGETAGL 51
+ WFR RL DN AL F AS + L PVF+ +AG+
Sbjct: 4 IFWFRRDRRLQDNEALSFAASTSQELLPVFVLPTSSAGM 42
>gi|323137318|ref|ZP_08072396.1| DNA photolyase, FAD-binding [Methylocystis sp. ATCC 49242]
gi|322397305|gb|EFX99828.1| DNA photolyase, FAD-binding [Methylocystis sp. ATCC 49242]
Length = 472
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAG 50
AV WFR+ LRL DNPAL A+ + + +++ D E+AG
Sbjct: 5 AVVWFRNDLRLADNPALTAAARSGAPIIALYVLDDESAG 43
>gi|168060079|ref|XP_001782026.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666517|gb|EDQ53169.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 711
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
+ K+ A+ WF+H LR D+P L A+ + P+FIFD
Sbjct: 2 SGKKTAIVWFKHDLRTDDHPGLAFAAQYDHVIPLFIFD 39
>gi|407683883|ref|YP_006799057.1| deoxyribodipyrimidine photolyase [Alteromonas macleodii str.
'English Channel 673']
gi|407245494|gb|AFT74680.1| deoxyribodipyrimidine photolyase [Alteromonas macleodii str.
'English Channel 673']
Length = 435
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 8 NNKEVAVHWFRHGLRLHDNPAL 29
NN + ++WFRH LRLHDN A+
Sbjct: 12 NNNQRGLYWFRHDLRLHDNAAI 33
>gi|384248949|gb|EIE22432.1| hypothetical protein COCSUDRAFT_1729, partial [Coccomyxa
subellipsoidea C-169]
Length = 469
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A + PV+++ E G F
Sbjct: 3 WFRRDLRVSDNPALIAAVQAATTVPVYVWAPEEEGQF 39
>gi|296084158|emb|CBI24546.3| unnamed protein product [Vitis vinifera]
Length = 704
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 5 NSPNNKEVAVHWFRHGLRLHDNPALF-EASLNSVLYPVFIFDGETAGLF 52
+S + VAV WF+H LR+ D+P L AS + + P+++FD F
Sbjct: 38 SSAIDDSVAVLWFKHDLRIDDHPGLVAAASRHRTVIPLYVFDRRILSRF 86
>gi|161779368|gb|ABX79355.1| cryptochrome 1 [Vitis vinifera]
Length = 681
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
++ WFR LR+ DNPAL + PVFI+ E G +
Sbjct: 6 CSIVWFRRDLRVEDNPALAAGVRAGAVIPVFIWAPEEEGPY 46
>gi|225459298|ref|XP_002285792.1| PREDICTED: cryptochrome-1 [Vitis vinifera]
Length = 681
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
++ WFR LR+ DNPAL + PVFI+ E G +
Sbjct: 6 CSIVWFRRDLRVEDNPALAAGVRAGAVIPVFIWAPEEEGPY 46
>gi|257388583|ref|YP_003178356.1| deoxyribodipyrimidine photo-lyase [Halomicrobium mukohataei DSM
12286]
gi|257170890|gb|ACV48649.1| Deoxyribodipyrimidine photo-lyase [Halomicrobium mukohataei DSM
12286]
Length = 466
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
+HW R LR DN L A+ +S + PVF+FD
Sbjct: 3 IHWHRRDLRTTDNAGLAAATADSPVVPVFVFD 34
>gi|161898816|gb|ABX80391.1| cryptochrome 1 [Vitis riparia]
Length = 681
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
++ WFR LR+ DNPAL + PVFI+ E G +
Sbjct: 6 CSIVWFRRDLRVEDNPALAAGVRAGAVIPVFIWAPEEEGPY 46
>gi|302141959|emb|CBI19162.3| unnamed protein product [Vitis vinifera]
Length = 691
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
++ WFR LR+ DNPAL + PVFI+ E G +
Sbjct: 6 CSIVWFRRDLRVEDNPALAAGVRAGAVIPVFIWAPEEEGPY 46
>gi|37520353|ref|NP_923730.1| DNA photolyase [Gloeobacter violaceus PCC 7421]
gi|35211346|dbj|BAC88725.1| DNA photolyase [Gloeobacter violaceus PCC 7421]
Length = 479
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEAS-LNSVLYPVFIFD 45
+A+ W R LR+HDNPAL++AS + VFI D
Sbjct: 4 IAIVWHRRDLRVHDNPALWQASRTGGQVLAVFIVD 38
>gi|395802067|ref|ZP_10481321.1| deoxyribodipyrimidine photo-lyase [Flavobacterium sp. F52]
gi|395435798|gb|EJG01738.1| deoxyribodipyrimidine photo-lyase [Flavobacterium sp. F52]
Length = 431
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGE 47
++V + WFR LRL DN LF A N + P+FIFD +
Sbjct: 4 QKVTLFWFRRDLRLEDNTGLFHALQSNFPVVPLFIFDDD 42
>gi|406596892|ref|YP_006748022.1| deoxyribodipyrimidine photolyase [Alteromonas macleodii ATCC
27126]
gi|406374213|gb|AFS37468.1| deoxyribodipyrimidine photolyase [Alteromonas macleodii ATCC
27126]
Length = 435
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 8 NNKEVAVHWFRHGLRLHDNPAL 29
NN + ++WFRH LRLHDN A+
Sbjct: 12 NNNQRGLYWFRHDLRLHDNAAI 33
>gi|301617517|ref|XP_002938187.1| PREDICTED: cryptochrome-2-like [Xenopus (Silurana) tropicalis]
Length = 862
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 16 WFRHGLRLHDNPALFEASLNSV-LYPVFIF 44
WFR LRLHDNPAL A + V + PVF++
Sbjct: 235 WFRRDLRLHDNPALISALEHGVPVIPVFLW 264
>gi|224099353|ref|XP_002334490.1| predicted protein [Populus trichocarpa]
gi|222872649|gb|EEF09780.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 2 DTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAG 50
D N+ + + WFR+ LR+HDN L A+ +S+ + PV+ FD G
Sbjct: 115 DPSNAAGTRRACIVWFRNDLRVHDNECLNSANNDSMSVLPVYCFDPRDYG 164
>gi|224121408|ref|XP_002330820.1| predicted protein [Populus trichocarpa]
gi|222872622|gb|EEF09753.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
N K A+ WFR+ LR+ DN LF+A +NS + PV+ D
Sbjct: 32 NGKGAAIVWFRNDLRVLDNEVLFKAWVNSESVLPVYCVD 70
>gi|436834800|ref|YP_007320016.1| Deoxyribodipyrimidine photo-lyase [Fibrella aestuarina BUZ 2]
gi|384066213|emb|CCG99423.1| Deoxyribodipyrimidine photo-lyase [Fibrella aestuarina BUZ 2]
Length = 452
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 4 PNSPNNKEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGE 47
P +P +A+ W R LRLHDN AL+ A + P+FIFD +
Sbjct: 3 PETP----IAIMWHRRDLRLHDNAALYYALKAGRPVLPLFIFDKD 43
>gi|88704316|ref|ZP_01102030.1| Deoxyribodipyrimidine photolyase [Congregibacter litoralis KT71]
gi|88701367|gb|EAQ98472.1| Deoxyribodipyrimidine photolyase [Congregibacter litoralis KT71]
Length = 434
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 13 AVHWFRHGLRLHDNPALFEAS 33
A++WFR+ LRLHDNP L EA+
Sbjct: 3 AIYWFRNDLRLHDNPGLVEAA 23
>gi|326332769|ref|ZP_08199030.1| deoxyribodipyrimidine photolyase [Nocardioidaceae bacterium
Broad-1]
gi|325949468|gb|EGD41547.1| deoxyribodipyrimidine photolyase [Nocardioidaceae bacterium
Broad-1]
Length = 446
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
++ WFR LRL D+PAL A+ + P+F+ D AG
Sbjct: 3 TSLMWFRRDLRLGDHPALQAAAAEGQVVPLFVLDPRLAG 41
>gi|386821526|ref|ZP_10108742.1| deoxyribodipyrimidine photolyase [Joostella marina DSM 19592]
gi|386426632|gb|EIJ40462.1| deoxyribodipyrimidine photolyase [Joostella marina DSM 19592]
Length = 434
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFD 45
K +++ WFR LRL+DN EA S N V+ P+FIFD
Sbjct: 3 KCISIFWFRRDLRLNDNIGFLEALKSGNPVM-PIFIFD 39
>gi|319954856|ref|YP_004166123.1| deoxyribodipyrimidine photo-lyase [Cellulophaga algicola DSM
14237]
gi|319423516|gb|ADV50625.1| Deoxyribodipyrimidine photo-lyase [Cellulophaga algicola DSM
14237]
Length = 436
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGE 47
++++ WFR LRL DN L++A + + P+FIFD E
Sbjct: 4 KISIFWFRRDLRLEDNVGLYQALKGDYPVLPIFIFDKE 41
>gi|255564190|ref|XP_002523092.1| DNA photolyase, putative [Ricinus communis]
gi|223537654|gb|EEF39277.1| DNA photolyase, putative [Ricinus communis]
Length = 458
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 4 PNSPNN----KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAG 50
P+ P+N + ++ WFR+ LR+HDN L A+ S+ + PV+ FD G
Sbjct: 115 PSDPSNAAGIRRASIVWFRNDLRVHDNECLNSANNESMSVLPVYCFDPREYG 166
>gi|260063633|ref|YP_003196713.1| deoxyribodipyrimidine photolyase [Robiginitalea biformata
HTCC2501]
gi|88783078|gb|EAR14251.1| deoxyribodipyrimidine photolyase [Robiginitalea biformata
HTCC2501]
Length = 515
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
A++WFR+ LR+ DNP L A + + VF FD
Sbjct: 46 TALYWFRNDLRVTDNPGLLAACSSQRVLTVFCFD 79
>gi|411117034|ref|ZP_11389521.1| deoxyribodipyrimidine photolyase [Oscillatoriales cyanobacterium
JSC-12]
gi|410713137|gb|EKQ70638.1| deoxyribodipyrimidine photolyase [Oscillatoriales cyanobacterium
JSC-12]
Length = 547
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
WFR LR+ D+ ++ A+L + PVF+FD
Sbjct: 7 WFRRDLRIADHAPIYRAALRGAVIPVFVFD 36
>gi|410615205|ref|ZP_11326231.1| deoxyribodipyrimidine photo-lyase [Glaciecola psychrophila 170]
gi|410165289|dbj|GAC40120.1| deoxyribodipyrimidine photo-lyase [Glaciecola psychrophila 170]
Length = 484
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
WFR LRL DNPAL AS ++ P++I D
Sbjct: 11 WFRQDLRLRDNPALTYASERGLVIPLYISD 40
>gi|126728554|ref|ZP_01744369.1| Deoxyribodipyrimidine photolyase [Sagittula stellata E-37]
gi|126710484|gb|EBA09535.1| Deoxyribodipyrimidine photolyase [Sagittula stellata E-37]
Length = 472
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGL 51
WFR LRL D+ AL EA+ + PVFI D GL
Sbjct: 10 WFRRDLRLSDHAALTEAASGGPVIPVFIRDALVDGL 45
>gi|118594490|ref|ZP_01551837.1| deoxyribodipyrimidine photo-lyase [Methylophilales bacterium
HTCC2181]
gi|118440268|gb|EAV46895.1| deoxyribodipyrimidine photo-lyase [Methylophilales bacterium
HTCC2181]
Length = 465
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
WFR LRLHDN AL A S + +Y VFIFD
Sbjct: 2 WFRRDLRLHDNHALHHALSQSDNVYCVFIFD 32
>gi|356576533|ref|XP_003556385.1| PREDICTED: cryptochrome-2-like [Glycine max]
Length = 634
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ + PV+I+ + G F
Sbjct: 9 WFRRDLRIEDNPALAAAAKEGSVLPVYIWCPKEEGQF 45
>gi|261876465|dbj|BAI47558.1| cryptochrome2 [Glycine max]
Length = 634
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ + PV+I+ + G F
Sbjct: 9 WFRRDLRIEDNPALAAAAKEGSVLPVYIWCPKEEGQF 45
>gi|311748125|ref|ZP_07721910.1| deoxyribodipyrimidine photolyase [Algoriphagus sp. PR1]
gi|126576610|gb|EAZ80858.1| deoxyribodipyrimidine photolyase [Algoriphagus sp. PR1]
Length = 432
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
K+++V WFR LRL DN L+ A + + P+FIFD
Sbjct: 2 KKLSVFWFRRDLRLEDNTGLYYALQQETDVLPLFIFD 38
>gi|409195416|ref|ZP_11224079.1| DASH family cryptochrome [Marinilabilia salmonicolor JCM 21150]
Length = 433
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
++WFR+ LR+HDNPAL A S + + P+FI D
Sbjct: 14 IYWFRNDLRIHDNPALTMALSEGNPVIPIFIAD 46
>gi|291290511|dbj|BAI82611.1| cryptochrome 1 [Xenopus (Silurana) tropicalis]
Length = 605
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 16 WFRHGLRLHDNPALFEASLNS-VLYPVFIFDGETAG 50
WFR GLRLHDNPAL E + + V+I D AG
Sbjct: 1 WFRKGLRLHDNPALRECIQGADTIRCVYILDPWFAG 36
>gi|297812689|ref|XP_002874228.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297320065|gb|EFH50487.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 566
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
N K + + WFR+ LR+ DN AL++A S + L PV+ D
Sbjct: 80 NGKGITILWFRNDLRVLDNDALYKAWSSSDTLLPVYCLD 118
>gi|157412732|ref|YP_001483598.1| deoxyribodipyrimidine photolyase [Prochlorococcus marinus str.
MIT 9215]
gi|157387307|gb|ABV50012.1| Deoxyribodipyrimidine photolyase [Prochlorococcus marinus str.
MIT 9215]
Length = 497
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 27/38 (71%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGE 47
K++ + WF+ LR+ +N AL+E+ ++ + P++IF+ E
Sbjct: 2 KDINILWFKKDLRIDENEALYESLKDNDILPIYIFEIE 39
>gi|284033744|ref|YP_003383675.1| deoxyribodipyrimidine photo-lyase [Kribbella flavida DSM 17836]
gi|283813037|gb|ADB34876.1| Deoxyribodipyrimidine photo-lyase [Kribbella flavida DSM 17836]
Length = 437
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 8/40 (20%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
AV WFR LRL DNPAL +A V DG AG+F
Sbjct: 3 AVMWFRRDLRLADNPALLDA--------VAAGDGRVAGVF 34
>gi|348029288|ref|YP_004871974.1| deoxyribodipyrimidine photolyase [Glaciecola nitratireducens
FR1064]
gi|347946631|gb|AEP29981.1| Deoxyribodipyrimidine photolyase [Glaciecola nitratireducens
FR1064]
Length = 434
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFE-ASLNSVLYPVFIFDGETA 49
+K+V +HWFR LR+ DN +L AS L V+++ G+T+
Sbjct: 2 SKKVGIHWFRKDLRIQDNASLASIASQVDELVCVYLYQGQTS 43
>gi|399064694|ref|ZP_10747561.1| deoxyribodipyrimidine photolyase [Novosphingobium sp. AP12]
gi|398030435|gb|EJL23848.1| deoxyribodipyrimidine photolyase [Novosphingobium sp. AP12]
Length = 455
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGET 48
W R LRL D PA+ EA+ + PV+I D ET
Sbjct: 8 WLRRDLRLSDQPAIAEAARKGPVIPVYICDDET 40
>gi|133754344|gb|ABO38436.1| (6-4) photolyase [Danaus plexippus]
Length = 501
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
Query: 14 VHWFRHGLRLHDNPALFEA-----SLNSVLYPVFIFD 45
+HWFR LRLHDN AL A + +L P+++ D
Sbjct: 8 IHWFRLDLRLHDNLALRNAINEAENRKQILRPIYVID 44
>gi|254421675|ref|ZP_05035393.1| deoxyribodipyrimidine photolyase family [Synechococcus sp. PCC
7335]
gi|196189164|gb|EDX84128.1| deoxyribodipyrimidine photolyase family [Synechococcus sp. PCC
7335]
Length = 550
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
V WFR LR+ D+ L+ A+ ++ PVF+FD
Sbjct: 5 VVWFRRDLRIADHEPLYRAARRGLIVPVFVFD 36
>gi|431797441|ref|YP_007224345.1| deoxyribodipyrimidine photolyase [Echinicola vietnamensis DSM
17526]
gi|430788206|gb|AGA78335.1| deoxyribodipyrimidine photolyase [Echinicola vietnamensis DSM
17526]
Length = 431
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFD 45
K++ + W R LRL DN ALF A N+VL P+FIFD
Sbjct: 2 KKITLFWMRRDLRLEDNTALFYACQQENNVL-PLFIFD 38
>gi|332662341|ref|YP_004445129.1| deoxyribodipyrimidine photo-lyase [Haliscomenobacter hydrossis
DSM 1100]
gi|332331155|gb|AEE48256.1| Deoxyribodipyrimidine photo-lyase [Haliscomenobacter hydrossis
DSM 1100]
Length = 449
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGE 47
+ + + WFR LRL DN L+ A N + P+FIFD E
Sbjct: 2 QAITLFWFRRDLRLQDNAGLYHALKSNFPVLPLFIFDTE 40
>gi|238592825|ref|XP_002393022.1| hypothetical protein MPER_07324 [Moniliophthora perniciosa FA553]
gi|215459875|gb|EEB93952.1| hypothetical protein MPER_07324 [Moniliophthora perniciosa FA553]
Length = 74
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEA-SLN-SVLYPVFIFDGE 47
+K ++WFR LRLH +PAL A SL LYP++ +D E
Sbjct: 2 SKHRVLYWFRTDLRLHSSPALHAALSLQPEALYPIWTWDPE 42
>gi|206974530|ref|ZP_03235446.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
H3081.97]
gi|206747173|gb|EDZ58564.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
H3081.97]
Length = 476
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + P++++D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVLPLYVYD 37
>gi|290997872|ref|XP_002681505.1| predicted protein [Naegleria gruberi]
gi|284095129|gb|EFC48761.1| predicted protein [Naegleria gruberi]
Length = 528
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Query: 16 WFRHGLRLHDNPALFEA-----SLNSVLYPVFIFDGETAGL 51
WFR+ LR+HDN AL+ A N L P++IFD + L
Sbjct: 35 WFRNDLRIHDNEALYYAIKKAKKENKKLLPIYIFDKSQSQL 75
>gi|255531982|ref|YP_003092354.1| deoxyribodipyrimidine photo-lyase [Pedobacter heparinus DSM 2366]
gi|255344966|gb|ACU04292.1| Deoxyribodipyrimidine photo-lyase [Pedobacter heparinus DSM 2366]
Length = 434
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
+V++ WFR LRL DN L+ A S + P+FIFD G
Sbjct: 4 KVSIFWFRRDLRLEDNVGLYHALSSGFPVLPIFIFDENILG 44
>gi|428220832|ref|YP_007105002.1| deoxyribodipyrimidine photolyase [Synechococcus sp. PCC 7502]
gi|427994172|gb|AFY72867.1| deoxyribodipyrimidine photolyase [Synechococcus sp. PCC 7502]
Length = 481
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 12 VAVHWFRHGLRLHDNPALFEASL--NSVLYPVFIFD 45
+++ W R LRL DNPAL +A++ NS +FIFD
Sbjct: 4 ISIVWHRRDLRLQDNPALAKAAVIPNSETVGIFIFD 39
>gi|217960578|ref|YP_002339142.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
AH187]
gi|229139780|ref|ZP_04268347.1| Deoxyribodipyrimidine photolyase [Bacillus cereus BDRD-ST26]
gi|423352873|ref|ZP_17330500.1| hypothetical protein IAU_00949 [Bacillus cereus IS075]
gi|423373016|ref|ZP_17350356.1| hypothetical protein IC5_02072 [Bacillus cereus AND1407]
gi|423567933|ref|ZP_17544180.1| hypothetical protein II7_01156 [Bacillus cereus MSX-A12]
gi|217063006|gb|ACJ77256.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
AH187]
gi|228643660|gb|EEK99924.1| Deoxyribodipyrimidine photolyase [Bacillus cereus BDRD-ST26]
gi|401090879|gb|EJP99030.1| hypothetical protein IAU_00949 [Bacillus cereus IS075]
gi|401097348|gb|EJQ05371.1| hypothetical protein IC5_02072 [Bacillus cereus AND1407]
gi|401211272|gb|EJR18020.1| hypothetical protein II7_01156 [Bacillus cereus MSX-A12]
Length = 476
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + P++++D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVLPLYVYD 37
>gi|398412077|ref|XP_003857369.1| hypothetical protein MYCGRDRAFT_66122 [Zymoseptoria tritici
IPO323]
gi|339477254|gb|EGP92345.1| hypothetical protein MYCGRDRAFT_66122 [Zymoseptoria tritici
IPO323]
Length = 670
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA-SLN-SVLYPVFIFD 45
K ++WFR LRLHD+PAL A LN YP++ +D
Sbjct: 3 KPRVLYWFRTDLRLHDSPALKSALDLNPEAFYPIWCWD 40
>gi|375285088|ref|YP_005105527.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
NC7401]
gi|358353615|dbj|BAL18787.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
NC7401]
Length = 469
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + P++++D
Sbjct: 2 FQKDFRLYDNPALFEAAQSGEVLPLYVYD 30
>gi|410665733|ref|YP_006918104.1| Cryptochrome [Simiduia agarivorans SA1 = DSM 21679]
gi|409028090|gb|AFV00375.1| Cryptochrome [Simiduia agarivorans SA1 = DSM 21679]
Length = 433
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
V++HWF + LRL DNPAL A++ L +++ D
Sbjct: 4 VSLHWFINDLRLADNPALCRAAMADRLICLYVID 37
>gi|381168517|ref|ZP_09877711.1| Deoxyribodipyrimidine photo-lyase (DNA photolyase)
(Photoreactivating enzyme) [Phaeospirillum molischianum
DSM 120]
gi|380682377|emb|CCG42529.1| Deoxyribodipyrimidine photo-lyase (DNA photolyase)
(Photoreactivating enzyme) [Phaeospirillum molischianum
DSM 120]
Length = 482
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSV-LYPVFI 43
A+ WFR LRL DNPAL EA+ + L P+FI
Sbjct: 5 AIVWFRRDLRLADNPALVEAAASGQPLIPLFI 36
>gi|121705010|ref|XP_001270768.1| DNA photolyase, putative [Aspergillus clavatus NRRL 1]
gi|119398914|gb|EAW09342.1| DNA photolyase, putative [Aspergillus clavatus NRRL 1]
Length = 613
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA-SLN-SVLYPVFIFD 45
K V ++W R LRLHD+PAL A +LN S+ P++ +D
Sbjct: 2 KPVVLYWHRTDLRLHDSPALHAALALNPSIFIPIWTWD 39
>gi|322369279|ref|ZP_08043844.1| deoxyribodipyrimidine photo-lyase [Haladaptatus paucihalophilus
DX253]
gi|320551011|gb|EFW92660.1| deoxyribodipyrimidine photo-lyase [Haladaptatus paucihalophilus
DX253]
Length = 464
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYPVFIFDG 46
VHW R LR+ DN AL S S + PVF+FDG
Sbjct: 3 VHWHRRDLRVADNRAL---SRGSPVLPVFVFDG 32
>gi|120436173|ref|YP_861859.1| deoxyribodipyrimidine photo-lyase [Gramella forsetii KT0803]
gi|117578323|emb|CAL66792.1| deoxyribodipyrimidine photo-lyase [Gramella forsetii KT0803]
Length = 435
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVL--YPVFIFDGE 47
+K+V + WFR LRL DN L +A+L L P+FIFD E
Sbjct: 2 SKKVNIFWFRRDLRLDDNAGL-KAALQGDLPVLPIFIFDHE 41
>gi|228986230|ref|ZP_04146370.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228773492|gb|EEM21918.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 476
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + P++++D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVLPLYVYD 37
>gi|148467519|gb|ABQ65680.1| antennal cryptochrome 1 [Spodoptera littoralis]
Length = 348
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 13 AVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFDGETAG 50
+V WFRH LRLHDNP+L A +P+FIFDGE+AG
Sbjct: 5 SVLWFRHRLRLHDNPSLHSALEEKGFPFFPIFIFDGESAG 44
>gi|343403537|dbj|BAK61591.1| cryptochrome2a [Glycine soja]
gi|343403539|dbj|BAK61592.1| cryptochrome2a [Glycine soja]
gi|343403541|dbj|BAK61593.1| cryptochrome2a [Glycine soja]
gi|343403543|dbj|BAK61594.1| cryptochrome2a [Glycine soja]
gi|343403545|dbj|BAK61595.1| cryptochrome2a [Glycine soja]
gi|343403547|dbj|BAK61596.1| cryptochrome2a [Glycine soja]
gi|343403549|dbj|BAK61597.1| cryptochrome2a [Glycine soja]
Length = 631
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ + PV+++ + G F
Sbjct: 9 WFRRDLRIEDNPALTAAAKEGSVLPVYVWCPKEEGQF 45
>gi|261876459|dbj|BAI47555.1| cryptochrome2 [Glycine max]
Length = 642
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ + PV+++ + G F
Sbjct: 9 WFRRDLRIEDNPALTAAAKEGSVLPVYVWCPKEEGQF 45
>gi|147791052|emb|CAN68022.1| hypothetical protein VITISV_003623 [Vitis vinifera]
Length = 212
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 16 WFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAG 50
WFR+ LR+HDN L AS S+ + PV+ FD G
Sbjct: 8 WFRNDLRVHDNECLNSASNESMSMLPVYCFDPRDYG 43
>gi|351734424|ref|NP_001235220.1| cryptochrome 2 [Glycine max]
gi|89199718|gb|ABD63262.1| cryptochrome 2 [Glycine max]
Length = 634
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ + PV+++ + G F
Sbjct: 9 WFRRDLRIEDNPALTAAAKEGSVLPVYVWCPKEEGQF 45
>gi|117924446|ref|YP_865063.1| deoxyribodipyrimidine photo-lyase type I [Magnetococcus marinus
MC-1]
gi|117608202|gb|ABK43657.1| deoxyribodipyrimidine photo-lyase type I [Magnetococcus marinus
MC-1]
Length = 476
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
WFR LRL DNPAL A+ + PV+I +
Sbjct: 11 WFRRDLRLSDNPALLAATAMGQVLPVYIHE 40
>gi|375148275|ref|YP_005010716.1| deoxyribodipyrimidine photo-lyase [Niastella koreensis GR20-10]
gi|361062321|gb|AEW01313.1| Deoxyribodipyrimidine photo-lyase [Niastella koreensis GR20-10]
Length = 435
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
K + + WFR LRL DN L+ A N+ + P+FIFD
Sbjct: 2 KNINIFWFRRDLRLDDNAGLYHALKGNNPVLPIFIFD 38
>gi|261876461|dbj|BAI47556.1| cryptochrome2 [Glycine max]
Length = 634
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
WFR LR+ DNPAL A+ + PV+++ + G F
Sbjct: 9 WFRRDLRIEDNPALAAAAKEGSVLPVYVWCPKEEGQF 45
>gi|377574583|ref|ZP_09803608.1| deoxyribodipyrimidine photo-lyase [Mobilicoccus pelagius NBRC
104925]
gi|377536740|dbj|GAB48773.1| deoxyribodipyrimidine photo-lyase [Mobilicoccus pelagius NBRC
104925]
Length = 454
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
++ WFR LRLHD+PAL A + + P+ + D
Sbjct: 2 TSILWFRRDLRLHDHPALLAAHADGDVVPLVVLD 35
>gi|423605178|ref|ZP_17581071.1| hypothetical protein IIK_01759 [Bacillus cereus VD102]
gi|401244326|gb|EJR50690.1| hypothetical protein IIK_01759 [Bacillus cereus VD102]
Length = 476
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + P++++D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVLPLYVYD 37
>gi|423575239|ref|ZP_17551358.1| hypothetical protein II9_02460 [Bacillus cereus MSX-D12]
gi|401209847|gb|EJR16604.1| hypothetical protein II9_02460 [Bacillus cereus MSX-D12]
Length = 476
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + P++++D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVLPLYVYD 37
>gi|228915743|ref|ZP_04079325.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228843918|gb|EEM88985.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 476
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + P++++D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVLPLYVYD 37
>gi|229199867|ref|ZP_04326458.1| Deoxyribodipyrimidine photolyase [Bacillus cereus m1293]
gi|228583609|gb|EEK41836.1| Deoxyribodipyrimidine photolyase [Bacillus cereus m1293]
Length = 476
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + P++++D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVLPLYVYD 37
>gi|103486487|ref|YP_616048.1| deoxyribodipyrimidine photolyase [Sphingopyxis alaskensis RB2256]
gi|98976564|gb|ABF52715.1| Deoxyribodipyrimidine photo-lyase type I [Sphingopyxis alaskensis
RB2256]
Length = 457
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAGLF 52
W R LR+HD+PAL A + PVFI D ET G +
Sbjct: 7 WLRQDLRVHDHPALLAAIAGGAVIPVFILDDETPGTW 43
>gi|118364198|ref|XP_001015321.1| FAD binding domain of DNA photolyase family protein [Tetrahymena
thermophila]
gi|89297088|gb|EAR95076.1| FAD binding domain of DNA photolyase family protein [Tetrahymena
thermophila SB210]
Length = 472
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
++V + WFR LRL DN L+ A S+ + P+FIFD
Sbjct: 16 QKVNLFWFRRDLRLFDNVGLYHALKESIPVVPLFIFD 52
>gi|399926990|ref|ZP_10784348.1| deoxyribodipyrimidine photo-lyase [Myroides injenensis M09-0166]
Length = 437
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNS--VLYPVFIFD 45
+++ V+WFR LRL DN F A+L S + P+FIFD
Sbjct: 5 EKIVVYWFRRDLRLKDNVG-FSAALQSGYKVLPIFIFD 41
>gi|304391382|ref|ZP_07373324.1| cryptochrome-2 [Ahrensia sp. R2A130]
gi|303295611|gb|EFL89969.1| cryptochrome-2 [Ahrensia sp. R2A130]
Length = 480
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLN-SVLYPVFIFDGETAGL 51
+ WFR LRL DNPAL A+ + + VF+FD + G+
Sbjct: 8 IMWFRQDLRLDDNPALIAAAESGKPVVAVFVFDEASEGI 46
>gi|404450368|ref|ZP_11015352.1| DASH family cryptochrome [Indibacter alkaliphilus LW1]
gi|403764104|gb|EJZ25020.1| DASH family cryptochrome [Indibacter alkaliphilus LW1]
Length = 473
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
WFR+ LR+HD+ LF AS +V + PV+ FD
Sbjct: 7 WFRNDLRVHDHAPLFAASQKAVEVIPVYCFD 37
>gi|428218359|ref|YP_007102824.1| deoxyribodipyrimidine photo-lyase [Pseudanabaena sp. PCC 7367]
gi|427990141|gb|AFY70396.1| Deoxyribodipyrimidine photo-lyase [Pseudanabaena sp. PCC 7367]
Length = 489
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 4 PNSPNNKE-VAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
P S NN + + + W R LR+ DNPAL +A + N +FIFD
Sbjct: 2 PKSLNNSQNLTIVWHRRDLRIADNPALDQAIAQNGATIGIFIFD 45
>gi|270159915|ref|ZP_06188571.1| deoxyribodipyrimidine photo-lyase [Legionella longbeachae D-4968]
gi|289165333|ref|YP_003455471.1| deoxyribodipyrimidine photolyase phrB [Legionella longbeachae
NSW150]
gi|269988254|gb|EEZ94509.1| deoxyribodipyrimidine photo-lyase [Legionella longbeachae D-4968]
gi|288858506|emb|CBJ12387.1| putative deoxyribodipyrimidine photolyase phrB [Legionella
longbeachae NSW150]
Length = 472
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAGL 51
A+ WFR LRL+DNPA EA S + + P++I+D + + L
Sbjct: 3 TALVWFRFDLRLNDNPAFIEACSHHQFVIPLYIYDEKNSVL 43
>gi|189184449|ref|YP_001938234.1| deoxyribodipyrimidine photolyase, DNA photolyase [Orientia
tsutsugamushi str. Ikeda]
gi|189181220|dbj|BAG41000.1| deoxyribodipyrimidine photolyase, DNA photolyase [Orientia
tsutsugamushi str. Ikeda]
Length = 505
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
N K++++ W R LRL DN EA +S + P+FIFD
Sbjct: 2 NMKKISIVWLRRNLRLEDNKPFAEALKSSKKIIPIFIFD 40
>gi|89891446|ref|ZP_01202951.1| deoxyribodipyrimidine photo-lyase [Flavobacteria bacterium BBFL7]
gi|89516220|gb|EAS18882.1| deoxyribodipyrimidine photo-lyase [Flavobacteria bacterium BBFL7]
Length = 440
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGE 47
+K+V + WFR +RL DN EA + + P+FIFD E
Sbjct: 2 SKKVNIFWFRRDMRLDDNVGFLEALKSDYPVLPIFIFDKE 41
>gi|254283655|ref|ZP_04958623.1| deoxyribodipyrimidine photo-lyase [gamma proteobacterium NOR51-B]
gi|219679858|gb|EED36207.1| deoxyribodipyrimidine photo-lyase [gamma proteobacterium NOR51-B]
Length = 477
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
E + WFR LRL D P L A+ + PVFI D
Sbjct: 3 ETTIFWFRQDLRLTDLPGLCAAAERGAVLPVFIHD 37
>gi|284046106|ref|YP_003396446.1| deoxyribodipyrimidine photo-lyase [Conexibacter woesei DSM 14684]
gi|283950327|gb|ADB53071.1| Deoxyribodipyrimidine photo-lyase [Conexibacter woesei DSM 14684]
Length = 476
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
A+ WFR LRLHD+P L A + ++ + PVF+ D
Sbjct: 5 TAIVWFRRDLRLHDHPPLVRALAAHARVVPVFVLD 39
>gi|449016857|dbj|BAM80259.1| probable cryptochrome DASH [Cyanidioschyzon merolae strain 10D]
Length = 669
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 12 VAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
A+ WFR+ LRLHDN AL A+ L V++FD
Sbjct: 104 TALLWFRNDLRLHDNEALRLANRAESLLCVYVFD 137
>gi|448704049|ref|ZP_21700589.1| deoxyribodipyrimidine photolyase [Halobiforma nitratireducens JCM
10879]
gi|445796665|gb|EMA47166.1| deoxyribodipyrimidine photolyase [Halobiforma nitratireducens JCM
10879]
Length = 475
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAG 50
+ AV WFR LRL DNP L A + PV++FD G
Sbjct: 2 DTAVVWFRDDLRLTDNPTLSRALEAAERIVPVYVFDPRRRG 42
>gi|343084950|ref|YP_004774245.1| DNA photolyase FAD-binding protein [Cyclobacterium marinum DSM
745]
gi|342353484|gb|AEL26014.1| DNA photolyase FAD-binding protein [Cyclobacterium marinum DSM
745]
Length = 434
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
+V + WFR LRL DN LF A N + P+FIFD
Sbjct: 3 KVTLFWFRRDLRLSDNIGLFTAYENEKNVLPLFIFD 38
>gi|123965634|ref|YP_001010715.1| deoxyribodipyrimidine photolyase [Prochlorococcus marinus str.
MIT 9515]
gi|123200000|gb|ABM71608.1| putative deoxyribodipyrimidine photolyase [Prochlorococcus
marinus str. MIT 9515]
Length = 503
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGE 47
K + + WF+ LR++DN AL E+ + + P+FI + E
Sbjct: 2 KNINILWFKKDLRINDNEALIESLKDRDIIPIFIIEKE 39
>gi|390945121|ref|YP_006408882.1| deoxyribodipyrimidine photolyase [Belliella baltica DSM 15883]
gi|390418549|gb|AFL86127.1| deoxyribodipyrimidine photolyase [Belliella baltica DSM 15883]
Length = 433
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
+++++ WFR LRL DN LF A + P+FIFD
Sbjct: 2 EKISIFWFRRDLRLEDNTGLFYAFEQEENVLPLFIFD 38
>gi|153831636|ref|ZP_01984303.1| cryptochrome dash [Vibrio harveyi HY01]
gi|148872146|gb|EDL70963.1| cryptochrome dash [Vibrio harveyi HY01]
Length = 450
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEAS 33
NK + ++WF + LR+HDNP L AS
Sbjct: 2 NKTIGLYWFTNDLRMHDNPLLTRAS 26
>gi|389748358|gb|EIM89535.1| DNA photolyase [Stereum hirsutum FP-91666 SS1]
Length = 629
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA-SLN-SVLYPVFIFD 45
K ++WFR LR+HD+PAL A LN LYPV+ +D
Sbjct: 3 KPRVLYWFRTDLRVHDSPALHAALQLNPECLYPVWCWD 40
>gi|84386253|ref|ZP_00989282.1| putative deoxyribodipyrimidine photolyase [Vibrio splendidus
12B01]
gi|84379023|gb|EAP95877.1| putative deoxyribodipyrimidine photolyase [Vibrio splendidus
12B01]
Length = 481
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFI 43
W R LR+HDNPAL A N V VFI
Sbjct: 6 WIRRDLRIHDNPALVAAVENGVTTAVFI 33
>gi|146297827|ref|YP_001192418.1| deoxyribodipyrimidine photo-lyase [Flavobacterium johnsoniae
UW101]
gi|146152245|gb|ABQ03099.1| Deoxyribodipyrimidine photo-lyase [Flavobacterium johnsoniae
UW101]
Length = 431
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
++V+ WFR LRL DN LF A + + + P+FIFD
Sbjct: 4 QKVSFFWFRRDLRLEDNTGLFHALQSDLPVIPLFIFD 40
>gi|318041065|ref|ZP_07973021.1| deoxyribodipyrimidine photo-lyase [Synechococcus sp. CB0101]
Length = 251
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
V WFR LRL D+ AL EA + PVF+ D
Sbjct: 5 VVWFRRDLRLSDHAALSEACNQGAVLPVFVLD 36
>gi|386283949|ref|ZP_10061172.1| deoxyribodipyrimidine photo-lyase [Sulfurovum sp. AR]
gi|385344852|gb|EIF51565.1| deoxyribodipyrimidine photo-lyase [Sulfurovum sp. AR]
Length = 451
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGE 47
WFR LR+ DNP L SL + P+FIFD +
Sbjct: 6 WFRRDLRVEDNPIL---SLGGEVLPIFIFDTQ 34
>gi|225865104|ref|YP_002750482.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
03BB102]
gi|225786063|gb|ACO26280.1| deoxyribodipyrimidine photo-lyase [Bacillus cereus 03BB102]
Length = 476
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + PV++ D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVVPVYVHD 37
>gi|330752085|emb|CBL80595.1| deoxyribodipyrimidine photolyase [uncultured Leeuwenhoekiella
sp.]
Length = 434
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 12 VAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGE 47
V++ WFR LRL DN EA + + P+FIFD E
Sbjct: 4 VSIFWFRRDLRLDDNVGFLEALKSDYPVLPIFIFDKE 40
>gi|423551107|ref|ZP_17527434.1| hypothetical protein IGW_01738 [Bacillus cereus ISP3191]
gi|401188440|gb|EJQ95508.1| hypothetical protein IGW_01738 [Bacillus cereus ISP3191]
Length = 476
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + PV++ D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVLPVYVHD 37
>gi|407705549|ref|YP_006829134.1| hypothetical protein MC28_2313 [Bacillus thuringiensis MC28]
gi|407383234|gb|AFU13735.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis MC28]
Length = 476
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + PV++ D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVVPVYVHD 37
>gi|358368155|dbj|GAA84772.1| DNA photolyase [Aspergillus kawachii IFO 4308]
Length = 664
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLN-SVLYPVFIFDGETA 49
+ W R LRLHDNPAL A SLN S P+F +D A
Sbjct: 11 IFWHRTDLRLHDNPALQAALSLNPSTFIPIFTWDPHYA 48
>gi|384181025|ref|YP_005566787.1| deoxyribodipyrimidine photolyase family protein [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|324327109|gb|ADY22369.1| deoxyribodipyrimidine photolyase family protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 476
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + PV++ D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVVPVYVHD 37
>gi|149372178|ref|ZP_01891448.1| deoxyribodipyrimidine photolyase-class I [unidentified
eubacterium SCB49]
gi|149354945|gb|EDM43507.1| deoxyribodipyrimidine photolyase-class I [unidentified
eubacterium SCB49]
Length = 435
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 11 EVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGE 47
+V V WFR LRL DN F+A + P+FIFD E
Sbjct: 4 KVNVFWFRRDLRLDDNLGFFKALHGKYPVLPIFIFDSE 41
>gi|149184696|ref|ZP_01863014.1| hypothetical protein ED21_28298 [Erythrobacter sp. SD-21]
gi|148832016|gb|EDL50449.1| hypothetical protein ED21_28298 [Erythrobacter sp. SD-21]
Length = 464
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
W R LR+ D PAL A+ + PV++ D E AG
Sbjct: 8 WLRRDLRVADQPALHAAAQAGPVIPVYVLDDERAG 42
>gi|444305910|ref|ZP_21141685.1| deoxyribodipyrimidine photo-lyase [Arthrobacter sp. SJCon]
gi|443481714|gb|ELT44634.1| deoxyribodipyrimidine photo-lyase [Arthrobacter sp. SJCon]
Length = 475
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEAS-LNSVLYPVFIFDGETAGL 51
++ E ++ W R LRL DNPAL EA+ L + ++I D E+ G+
Sbjct: 3 SSDETSLVWLRDDLRLDDNPALAEAAGLGLPMTVLYILDEESEGI 47
>gi|332293614|ref|YP_004432223.1| deoxyribodipyrimidine photo-lyase [Krokinobacter sp. 4H-3-7-5]
gi|332171700|gb|AEE20955.1| Deoxyribodipyrimidine photo-lyase [Krokinobacter sp. 4H-3-7-5]
Length = 465
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGE 47
++ +V + WFR LRL DN EA + + P+FIFD E
Sbjct: 31 SSNKVNIFWFRRDLRLDDNVGFLEALKGDLPVLPIFIFDKE 71
>gi|229185362|ref|ZP_04312545.1| Deoxyribodipyrimidine photolyase [Bacillus cereus BGSC 6E1]
gi|376267016|ref|YP_005119728.1| Deoxyribodipyrimidine photolyase [Bacillus cereus F837/76]
gi|228598095|gb|EEK55732.1| Deoxyribodipyrimidine photolyase [Bacillus cereus BGSC 6E1]
gi|364512816|gb|AEW56215.1| Deoxyribodipyrimidine photolyase [Bacillus cereus F837/76]
Length = 476
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + PV++ D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVVPVYVHD 37
>gi|118478461|ref|YP_895612.1| deoxyribodipyrimidine photo-lyase type I [Bacillus thuringiensis
str. Al Hakam]
gi|196042568|ref|ZP_03109807.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
03BB108]
gi|118417686|gb|ABK86105.1| deoxyribodipyrimidine photo-lyase type I [Bacillus thuringiensis
str. Al Hakam]
gi|196026052|gb|EDX64720.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
03BB108]
Length = 476
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + PV++ D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVVPVYVHD 37
>gi|407069234|ref|ZP_11100072.1| deoxyribodipyrimidine photolyase [Vibrio cyclitrophicus ZF14]
Length = 476
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFI 43
W R LR+HDNPAL A N V VFI
Sbjct: 6 WIRRDLRIHDNPALVAAVENGVTNAVFI 33
>gi|345867351|ref|ZP_08819365.1| DNA photolyase family protein [Bizionia argentinensis JUB59]
gi|344048281|gb|EGV43891.1| DNA photolyase family protein [Bizionia argentinensis JUB59]
Length = 434
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGE 47
+ WFR LRL DN +EA + + P+FIFD E
Sbjct: 7 IFWFRRDLRLDDNRGFYEALKSEYPVLPIFIFDSE 41
>gi|228934418|ref|ZP_04097254.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228825271|gb|EEM71067.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 476
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + PV++ D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVVPVYVHD 37
>gi|218904303|ref|YP_002452137.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
AH820]
gi|218535120|gb|ACK87518.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
AH820]
Length = 476
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + PV++ D
Sbjct: 9 FQKDFRLYDNPALFEATQSGEVVPVYVHD 37
>gi|156977901|ref|YP_001448807.1| deoxyribodipyrimidine photolyase [Vibrio harveyi ATCC BAA-1116]
gi|156529495|gb|ABU74580.1| hypothetical protein VIBHAR_06693 [Vibrio harveyi ATCC BAA-1116]
Length = 460
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEAS 33
NK + ++WF + LR+HDNP L AS
Sbjct: 12 NKTIGLYWFTNDLRMHDNPLLARAS 36
>gi|423447663|ref|ZP_17424542.1| hypothetical protein IEC_02271 [Bacillus cereus BAG5O-1]
gi|401130074|gb|EJQ37743.1| hypothetical protein IEC_02271 [Bacillus cereus BAG5O-1]
Length = 476
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + PV++ D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVVPVYVHD 37
>gi|402771126|ref|YP_006590663.1| DNA photolyase [Methylocystis sp. SC2]
gi|401773146|emb|CCJ06012.1| DNA photolyase, FAD-binding [Methylocystis sp. SC2]
Length = 480
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAG 50
A+ WFR+ LR+ DNPAL A+ L ++I D E+ G
Sbjct: 5 AIVWFRNDLRISDNPALLAAARTGAPLVALYILDDESPG 43
>gi|403177785|ref|XP_003336224.2| hypothetical protein PGTG_17805 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173202|gb|EFP91805.2| hypothetical protein PGTG_17805 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 731
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 14 VHWFRHGLRLHDNPALFEA-SLNSV-LYPVFIFD 45
++WFR LRLHD+PAL +A L V YPV+ +D
Sbjct: 101 LYWFRTDLRLHDSPALMKALELGPVEFYPVWCWD 134
>gi|325103845|ref|YP_004273499.1| deoxyribodipyrimidine photo-lyase [Pedobacter saltans DSM 12145]
gi|324972693|gb|ADY51677.1| Deoxyribodipyrimidine photo-lyase [Pedobacter saltans DSM 12145]
Length = 448
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 5 NSPNNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFD 45
N+ K++++ W R LRL D AL+ A N + P+FIFD
Sbjct: 12 NTITMKQISLVWLRRDLRLDDQAALYHALKNETNVLPLFIFD 53
>gi|301054669|ref|YP_003792880.1| deoxyribodipyrimidine photolyase [Bacillus cereus biovar
anthracis str. CI]
gi|300376838|gb|ADK05742.1| deoxyribodipyrimidine photolyase [Bacillus cereus biovar
anthracis str. CI]
Length = 476
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + PV++ D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVLPVYVHD 37
>gi|86144852|ref|ZP_01063184.1| putative deoxyribodipyrimidine photolyase [Vibrio sp. MED222]
gi|85837751|gb|EAQ55863.1| putative deoxyribodipyrimidine photolyase [Vibrio sp. MED222]
Length = 481
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFI 43
W R LR+HDNPAL A N V VFI
Sbjct: 6 WIRRDLRIHDNPALVSAVENGVSIAVFI 33
>gi|410029665|ref|ZP_11279495.1| deoxyribodipyrimidine photolyase [Marinilabilia sp. AK2]
Length = 433
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
+ V++ WFR LRL DN L+ A + + P+FIFD
Sbjct: 2 ENVSIFWFRRDLRLEDNTGLYYAYNQEKNILPIFIFD 38
>gi|344924235|ref|ZP_08777696.1| deoxyribodipyrimidine photo-lyase [Candidatus Odyssella
thessalonicensis L13]
Length = 473
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
WFR LRL DNPAL EA L + + P+FI +
Sbjct: 6 WFRKDLRLTDNPALQEAVRLKAQIIPIFILE 36
>gi|229097643|ref|ZP_04228601.1| Deoxyribodipyrimidine photolyase [Bacillus cereus Rock3-29]
gi|229116646|ref|ZP_04246032.1| Deoxyribodipyrimidine photolyase [Bacillus cereus Rock1-3]
gi|423379068|ref|ZP_17356352.1| hypothetical protein IC9_02421 [Bacillus cereus BAG1O-2]
gi|423442112|ref|ZP_17419018.1| hypothetical protein IEA_02442 [Bacillus cereus BAG4X2-1]
gi|423534525|ref|ZP_17510943.1| hypothetical protein IGI_02357 [Bacillus cereus HuB2-9]
gi|423540200|ref|ZP_17516591.1| hypothetical protein IGK_02292 [Bacillus cereus HuB4-10]
gi|423546432|ref|ZP_17522790.1| hypothetical protein IGO_02867 [Bacillus cereus HuB5-5]
gi|423623773|ref|ZP_17599551.1| hypothetical protein IK3_02371 [Bacillus cereus VD148]
gi|228666818|gb|EEL22274.1| Deoxyribodipyrimidine photolyase [Bacillus cereus Rock1-3]
gi|228685782|gb|EEL39702.1| Deoxyribodipyrimidine photolyase [Bacillus cereus Rock3-29]
gi|401173735|gb|EJQ80947.1| hypothetical protein IGK_02292 [Bacillus cereus HuB4-10]
gi|401181001|gb|EJQ88155.1| hypothetical protein IGO_02867 [Bacillus cereus HuB5-5]
gi|401257696|gb|EJR63893.1| hypothetical protein IK3_02371 [Bacillus cereus VD148]
gi|401633514|gb|EJS51291.1| hypothetical protein IC9_02421 [Bacillus cereus BAG1O-2]
gi|402416068|gb|EJV48387.1| hypothetical protein IEA_02442 [Bacillus cereus BAG4X2-1]
gi|402462942|gb|EJV94645.1| hypothetical protein IGI_02357 [Bacillus cereus HuB2-9]
Length = 476
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + PV++ D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVVPVYVHD 37
>gi|222096635|ref|YP_002530692.1| deoxyribodipyrimidine photolyase [Bacillus cereus Q1]
gi|221240693|gb|ACM13403.1| deoxyribodipyrimidine photolyase [Bacillus cereus Q1]
Length = 476
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + PV++ D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVVPVYVHD 37
>gi|196037804|ref|ZP_03105114.1| deoxyribodipyrimidine photo-lyase [Bacillus cereus NVH0597-99]
gi|196031074|gb|EDX69671.1| deoxyribodipyrimidine photo-lyase [Bacillus cereus NVH0597-99]
Length = 476
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + PV++ D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVVPVYVHD 37
>gi|196032015|ref|ZP_03099429.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
W]
gi|228928215|ref|ZP_04091256.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228946776|ref|ZP_04109081.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229122697|ref|ZP_04251907.1| Deoxyribodipyrimidine photolyase [Bacillus cereus 95/8201]
gi|195994766|gb|EDX58720.1| deoxyribodipyrimidine photolyase family protein [Bacillus cereus
W]
gi|228660748|gb|EEL16378.1| Deoxyribodipyrimidine photolyase [Bacillus cereus 95/8201]
gi|228812900|gb|EEM59216.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228831262|gb|EEM76858.1| Deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 476
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + PV++ D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVVPVYVHD 37
>gi|49185961|ref|YP_029213.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. Sterne]
gi|65320437|ref|ZP_00393396.1| COG0415: Deoxyribodipyrimidine photolyase [Bacillus anthracis
str. A2012]
gi|165868433|ref|ZP_02213093.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. A0488]
gi|167631730|ref|ZP_02390057.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. A0442]
gi|167637299|ref|ZP_02395579.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. A0193]
gi|170684891|ref|ZP_02876116.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. A0465]
gi|177649852|ref|ZP_02932853.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. A0174]
gi|190564773|ref|ZP_03017694.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. Tsiankovskii-I]
gi|227814024|ref|YP_002814033.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. CDC 684]
gi|229603798|ref|YP_002867382.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. A0248]
gi|254685712|ref|ZP_05149571.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. CNEVA-9066]
gi|254723122|ref|ZP_05184910.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. A1055]
gi|254738183|ref|ZP_05195886.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. Western North America USA6153]
gi|254742647|ref|ZP_05200332.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. Kruger B]
gi|254752497|ref|ZP_05204533.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. Vollum]
gi|254761013|ref|ZP_05213037.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. Australia 94]
gi|270000553|ref|NP_845490.2| deoxyribodipyrimidine photolyase [Bacillus anthracis str. Ames]
gi|386736907|ref|YP_006210088.1| Deoxyribodipyrimidine photolyase [Bacillus anthracis str. H9401]
gi|421510721|ref|ZP_15957609.1| deoxyribodipyrimidine photolyase [Bacillus anthracis str. UR-1]
gi|421636758|ref|ZP_16077356.1| deoxyribodipyrimidine photolyase [Bacillus anthracis str. BF1]
gi|49179888|gb|AAT55264.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. Sterne]
gi|164715159|gb|EDR20676.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. A0488]
gi|167514806|gb|EDR90172.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. A0193]
gi|167532028|gb|EDR94664.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. A0442]
gi|170671151|gb|EDT21889.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. A0465]
gi|172083804|gb|EDT68863.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. A0174]
gi|190564090|gb|EDV18054.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. Tsiankovskii-I]
gi|227005678|gb|ACP15421.1| deoxyribodipyrimidine photo-lyase [Bacillus anthracis str. CDC
684]
gi|229268206|gb|ACQ49843.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. A0248]
gi|269850227|gb|AAP26976.2| deoxyribodipyrimidine photo-lyase [Bacillus anthracis str. Ames]
gi|384386759|gb|AFH84420.1| Deoxyribodipyrimidine photolyase [Bacillus anthracis str. H9401]
gi|401819244|gb|EJT18426.1| deoxyribodipyrimidine photolyase [Bacillus anthracis str. UR-1]
gi|403395554|gb|EJY92792.1| deoxyribodipyrimidine photolyase [Bacillus anthracis str. BF1]
Length = 476
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + PV++ D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVVPVYVHD 37
>gi|220934567|ref|YP_002513466.1| Deoxyribodipyrimidine photo-lyase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995877|gb|ACL72479.1| Deoxyribodipyrimidine photo-lyase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 483
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFDGETAG 50
WFR LRL DNPAL A + + PV+I E G
Sbjct: 6 WFRRDLRLTDNPALARALEDGEVIPVYIHAPEEEG 40
>gi|254227923|ref|ZP_04921353.1| Deoxyribodipyrimidine photolyase [Vibrio sp. Ex25]
gi|262396094|ref|YP_003287947.1| deoxyribodipyrimidine photolyase single-strand-specific [Vibrio
sp. Ex25]
gi|151939419|gb|EDN58247.1| Deoxyribodipyrimidine photolyase [Vibrio sp. Ex25]
gi|262339688|gb|ACY53482.1| deoxyribodipyrimidine photolyase single-strand-specific [Vibrio
sp. Ex25]
Length = 444
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 19/24 (79%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEA 32
+K++ ++WF + LRLHDNP L +A
Sbjct: 2 DKKIGLYWFTNDLRLHDNPLLIDA 25
>gi|444920567|ref|ZP_21240408.1| Deoxyribodipyrimidine photo-lyase [Wohlfahrtiimonas
chitiniclastica SH04]
gi|444508386|gb|ELV08557.1| Deoxyribodipyrimidine photo-lyase [Wohlfahrtiimonas
chitiniclastica SH04]
Length = 457
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 13 AVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGE 47
++ WFR LR+HDN AL++A+ N +FI E
Sbjct: 3 SLMWFRSDLRIHDNEALYKATQNQQAIALFIIAHE 37
>gi|49478047|ref|YP_037258.1| deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49329603|gb|AAT60249.1| deoxyribodipyrimidine photolyase [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 476
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + PV++ D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVVPVYVHD 37
>gi|229075148|ref|ZP_04208142.1| Deoxyribodipyrimidine photolyase [Bacillus cereus Rock4-18]
gi|228707925|gb|EEL60104.1| Deoxyribodipyrimidine photolyase [Bacillus cereus Rock4-18]
Length = 476
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + PV++ D
Sbjct: 9 FQKDFRLYDNPALFEAAQSGEVVPVYVHD 37
>gi|284041014|ref|YP_003390944.1| DASH family cryptochrome [Spirosoma linguale DSM 74]
gi|283820307|gb|ADB42145.1| cryptochrome, DASH family [Spirosoma linguale DSM 74]
Length = 487
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 14 VHWFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
++WFR+ LRLHDN A N+ + PVF+FD
Sbjct: 5 LYWFRNDLRLHDNEGFVRALENADQVLPVFVFD 37
>gi|452824798|gb|EME31798.1| cryptochrome, DASH family [Galdieria sulphuraria]
Length = 570
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
N A+ WFR+ LRL DN L A+ + P+++FD
Sbjct: 71 NGGTAILWFRNNLRLSDNSCLDLANTAEAVLPLYVFD 107
>gi|340518659|gb|EGR48899.1| DNA photolyase [Trichoderma reesei QM6a]
Length = 628
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 4/39 (10%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLN---SVLYPVFIFD 45
K ++WFR LRLHD+PAL +A+L+ L+P++ +D
Sbjct: 3 KPRVIYWFRTDLRLHDSPAL-QAALDLEPEALWPIWTWD 40
>gi|47528471|ref|YP_019820.1| deoxyribodipyrimidine photolyase [Bacillus anthracis str. 'Ames
Ancestor']
gi|47503619|gb|AAT32295.1| deoxyribodipyrimidine photolyase family protein [Bacillus
anthracis str. 'Ames Ancestor']
Length = 469
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 17 FRHGLRLHDNPALFEASLNSVLYPVFIFD 45
F+ RL+DNPALFEA+ + + PV++ D
Sbjct: 2 FQKDFRLYDNPALFEAAQSGEVVPVYVHD 30
>gi|409098424|ref|ZP_11218448.1| deoxyribodipyrimidine photo-lyase [Pedobacter agri PB92]
Length = 134
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFDG 46
K + + WFR LRL DN L+ A S N V+ P+FIFD
Sbjct: 2 KKPINIFWFRRDLRLEDNAGLYHALKSDNPVI-PLFIFDK 40
>gi|333893079|ref|YP_004466954.1| deoxyribodipyrimidine photo-lyase [Alteromonas sp. SN2]
gi|332993097|gb|AEF03152.1| deoxyribodipyrimidine photo-lyase [Alteromonas sp. SN2]
Length = 474
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
WFR LR+ DNPAL A + P++I+D
Sbjct: 2 WFRQDLRVKDNPALNAACDEGKIIPIYIYD 31
>gi|320160751|ref|YP_004173975.1| deoxyribodipyrimidine photolyase [Anaerolinea thermophila UNI-1]
gi|319994604|dbj|BAJ63375.1| deoxyribodipyrimidine photolyase [Anaerolinea thermophila UNI-1]
Length = 466
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 18/30 (60%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
W R LRLHD+PAL A + PVFI D
Sbjct: 7 WIRRDLRLHDHPALEYALQKGRVIPVFILD 36
>gi|123967930|ref|YP_001008788.1| deoxyribodipyrimidine photolyase [Prochlorococcus marinus str.
AS9601]
gi|123198040|gb|ABM69681.1| putative deoxyribodipyrimidine photolyase [Prochlorococcus
marinus str. AS9601]
Length = 498
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
KE+ + WF+ LR+ DN AL EA ++ + P++I +
Sbjct: 2 KEINILWFKKDLRIFDNEALCEAIKDNDILPIYIIE 37
>gi|88811682|ref|ZP_01126936.1| DNA photolyase, Cryptochrome 1 apoprotein (Blue light
photoreceptor) [Nitrococcus mobilis Nb-231]
gi|88791073|gb|EAR22186.1| DNA photolyase, Cryptochrome 1 apoprotein (Blue light
photoreceptor) [Nitrococcus mobilis Nb-231]
Length = 479
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 8 NNKEVAVHWFRHGLRLHDNPALFEASLNSV-LYPVFIFDGETAGL 51
+N+ + WFR LRL D+P L V + PVFI D +T L
Sbjct: 2 SNRTPVLFWFRRDLRLADHPGLVACQAARVPVIPVFILDPQTEAL 46
>gi|399576486|ref|ZP_10770241.1| deoxyribodipyrimidine photo-lyase type i [Halogranum salarium
B-1]
gi|399237930|gb|EJN58859.1| deoxyribodipyrimidine photo-lyase type i [Halogranum salarium
B-1]
Length = 489
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 14 VHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGE 47
+HW R LR+ DN L A+ + PVF+FD E
Sbjct: 3 LHWHRRDLRVADNRGLAMAAEAGTVVPVFVFDDE 36
>gi|372210250|ref|ZP_09498052.1| deoxyribodipyrimidine photo-lyase [Flavobacteriaceae bacterium
S85]
Length = 428
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEA--SLNSVLYPVFIFD 45
K+V V WFR LR DN L +A S N VL P+FIFD
Sbjct: 2 KKVNVFWFRRDLRTFDNTGLNKALQSSNPVL-PIFIFD 38
>gi|395760275|ref|ZP_10440944.1| cryptochrome, dash family protein [Janthinobacterium lividum PAMC
25724]
Length = 444
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 1 MDTPNSPNNKEVAVHWFRHGLRLHDNPALFEA 32
M+T + + + ++WFR+ LRL DNPAL +A
Sbjct: 1 MNTDPAARSAQTHIYWFRNDLRLDDNPALRQA 32
>gi|284989430|ref|YP_003407984.1| Deoxyribodipyrimidine photo-lyase [Geodermatophilus obscurus DSM
43160]
gi|284062675|gb|ADB73613.1| Deoxyribodipyrimidine photo-lyase [Geodermatophilus obscurus DSM
43160]
Length = 454
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 12 VAVHWFRHGLRLHDNPALFE----ASLNSVLYPVFIFD 45
A+ WFR LRL D+PAL + A + + PVF+FD
Sbjct: 3 TALLWFRRDLRLADHPALLDAREAAGPDGAVVPVFVFD 40
>gi|390942759|ref|YP_006406520.1| deoxyribodipyrimidine photo-lyase (single-stranded DNA-specific)
[Belliella baltica DSM 15883]
gi|390416187|gb|AFL83765.1| deoxyribodipyrimidine photo-lyase (single-stranded DNA-specific)
[Belliella baltica DSM 15883]
Length = 472
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPALFEASLNS-VLYPVFIFD 45
WFR+ LRLHD+ ALF A S + PV+ FD
Sbjct: 9 WFRNDLRLHDHAALFSALEKSEEIIPVYCFD 39
>gi|451971961|ref|ZP_21925175.1| Deoxyribodipyrimidine photolyase [Vibrio alginolyticus E0666]
gi|451932148|gb|EMD79828.1| Deoxyribodipyrimidine photolyase [Vibrio alginolyticus E0666]
Length = 444
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 19/24 (79%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEA 32
+K++ ++WF + LRLHDNP L +A
Sbjct: 2 DKKIGLYWFTNDLRLHDNPLLVDA 25
>gi|417947770|ref|ZP_12590921.1| deoxyribodipyrimidine photo-lyase [Vibrio splendidus ATCC 33789]
gi|342810808|gb|EGU45879.1| deoxyribodipyrimidine photo-lyase [Vibrio splendidus ATCC 33789]
Length = 471
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFI 43
W R LR+HDNPAL A N V VFI
Sbjct: 6 WIRRDLRIHDNPALVSAIENGVSIAVFI 33
>gi|254525619|ref|ZP_05137671.1| deoxyribodipyrimidine photolyase [Prochlorococcus marinus str.
MIT 9202]
gi|221537043|gb|EEE39496.1| deoxyribodipyrimidine photolyase [Prochlorococcus marinus str.
MIT 9202]
Length = 497
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 10 KEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGE 47
K++ + WF+ LR+ +N AL E+ ++ + P+FIF+ E
Sbjct: 2 KDINILWFKKDLRIDENEALNESLKDNDILPIFIFEIE 39
>gi|298208823|ref|YP_003717002.1| deoxyribodipyrimidine photolyase-class I [Croceibacter atlanticus
HTCC2559]
gi|83848750|gb|EAP86619.1| deoxyribodipyrimidine photolyase-class I [Croceibacter atlanticus
HTCC2559]
Length = 434
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 9 NKEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
+K+V++ WFR LRL DN EA + + P+FIFD
Sbjct: 2 SKKVSIFWFRRDLRLDDNVGFLEALKGDYPVLPLFIFD 39
>gi|126735513|ref|ZP_01751258.1| putative deoxyribodipyrimidine photolyase [Roseobacter sp. CCS2]
gi|126714700|gb|EBA11566.1| putative deoxyribodipyrimidine photolyase [Roseobacter sp. CCS2]
Length = 505
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 1 MDTPNSPNNKEVAVHWFRHGLRLHDNPALFEASLNSVLYPVFIFDGE 47
M NSP + + V WF+ LRLHD+ L +A+ + P+++ + E
Sbjct: 1 MPAENSPP-RPLTVVWFKRDLRLHDHAPLSQAAQAGTVLPLYVIEPE 46
>gi|284034972|ref|YP_003384902.1| deoxyribodipyrimidine photo-lyase [Spirosoma linguale DSM 74]
gi|283814265|gb|ADB36103.1| Deoxyribodipyrimidine photo-lyase [Spirosoma linguale DSM 74]
Length = 438
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNPALFEA-SLNSVLYPVFIFD 45
W R LRLHDN AL+ A + PVFIFD
Sbjct: 9 WLRRDLRLHDNAALYYALKSGRPVIPVFIFD 39
>gi|217976568|ref|YP_002360715.1| deoxyribodipyrimidine photo-lyase [Methylocella silvestris BL2]
gi|217501944|gb|ACK49353.1| Deoxyribodipyrimidine photo-lyase [Methylocella silvestris BL2]
Length = 486
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 6 SPNNKEVAVHWFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAGL 51
+P + A+ WFR LRL DN AL A S L V+I + TAG
Sbjct: 3 APKTQNTAIVWFRDDLRLADNEALAAALSTGGPLLCVYILEDGTAGF 49
>gi|85702996|ref|ZP_01034100.1| deoxyribodipyrimidine photolyase [Roseovarius sp. 217]
gi|85671924|gb|EAQ26781.1| deoxyribodipyrimidine photolyase [Roseovarius sp. 217]
Length = 473
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 16 WFRHGLRLHDNPALFEA-SLNSVLYPVFIFDGETAGL 51
WFR LRL D+PAL A + PVFI D AGL
Sbjct: 10 WFRRDLRLADHPALCAAIEGGGPIIPVFIHDDSVAGL 46
>gi|148975313|ref|ZP_01812237.1| putative deoxyribodipyrimidine photolyase [Vibrionales bacterium
SWAT-3]
gi|145965237|gb|EDK30487.1| putative deoxyribodipyrimidine photolyase [Vibrionales bacterium
SWAT-3]
Length = 471
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFI 43
W R LR+HDNPAL A N V VFI
Sbjct: 6 WIRRDLRIHDNPALVSAIENGVSIAVFI 33
>gi|37521318|ref|NP_924695.1| photolyase [Gloeobacter violaceus PCC 7421]
gi|35212315|dbj|BAC89690.1| photolyase [Gloeobacter violaceus PCC 7421]
Length = 490
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 16 WFRHGLRLHDNP-ALFEASLNSVLYPVFIFD 45
WFR GLRLHDNP L A + LYP+FI D
Sbjct: 7 WFRKGLRLHDNPALLDAARDAARLYPLFIVD 37
>gi|313682739|ref|YP_004060477.1| deoxyribodipyrimidine photo-lyase [Sulfuricurvum kujiense DSM
16994]
gi|313155599|gb|ADR34277.1| Deoxyribodipyrimidine photo-lyase [Sulfuricurvum kujiense DSM
16994]
Length = 455
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 16 WFRHGLRLHDNPALFEASLNSVLYPVFIFD 45
WFR LR+ DNP L SL + P+FIFD
Sbjct: 6 WFRRDLRIEDNPLL---SLEGEVLPIFIFD 32
>gi|307103112|gb|EFN51376.1| hypothetical protein CHLNCDRAFT_7260, partial [Chlorella
variabilis]
Length = 491
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 13 AVHWFRHGLRLHDNP-ALFEASLNSVLYPVFIFD 45
++ WFR GLRLHDNP L A+ L P+FI D
Sbjct: 1 SIIWFRKGLRLHDNPALLAAAAGADHLCPIFILD 34
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.139 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 897,010,265
Number of Sequences: 23463169
Number of extensions: 25098260
Number of successful extensions: 58502
Number of sequences better than 100.0: 797
Number of HSP's better than 100.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 274
Number of HSP's that attempted gapping in prelim test: 57932
Number of HSP's gapped (non-prelim): 799
length of query: 52
length of database: 8,064,228,071
effective HSP length: 25
effective length of query: 27
effective length of database: 7,477,648,846
effective search space: 201896518842
effective search space used: 201896518842
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)