Query psy6307
Match_columns 368
No_of_seqs 201 out of 437
Neff 5.6
Searched_HMMs 29240
Date Fri Aug 16 23:02:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6307.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6307hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bij_A Uncharacterized protein 99.4 1.5E-12 5E-17 124.8 11.5 188 23-309 2-251 (285)
2 4af8_A Metacaspase MCA2; hydro 99.3 1.1E-11 3.8E-16 123.2 13.5 211 20-311 88-333 (367)
3 4f6o_A Metacaspase-1; rossmann 99.1 3.7E-10 1.3E-14 111.6 12.7 204 21-309 50-326 (350)
4 3uoa_B Mucosa-associated lymph 98.5 3E-07 1E-11 92.1 9.1 133 158-310 49-200 (390)
5 2j32_A Caspase-3; Pro-caspase3 95.6 0.012 4.1E-07 55.0 5.1 141 156-312 61-218 (250)
6 3od5_A Caspase-6; caspase doma 95.4 0.034 1.2E-06 52.9 7.9 143 156-314 66-238 (278)
7 1f1j_A Caspase-7 protease; cas 95.3 0.027 9.1E-07 54.4 6.5 140 157-312 115-274 (305)
8 3e4c_A Caspase-1; zymogen, inf 95.2 0.084 2.9E-06 50.8 10.0 141 157-311 103-277 (302)
9 3sir_A Caspase; hydrolase; 2.6 95.1 0.036 1.2E-06 52.1 6.9 162 102-312 40-225 (259)
10 1nw9_B Caspase 9, apoptosis-re 95.0 0.057 2E-06 51.0 8.0 142 156-312 66-255 (277)
11 4ehd_A Caspase-3; caspase, apo 95.0 0.04 1.4E-06 52.4 6.9 141 156-312 89-246 (277)
12 1m72_A Caspase-1; caspase, cys 95.0 0.033 1.1E-06 52.8 6.2 140 156-311 76-234 (272)
13 3h11_B Caspase-8; cell death, 94.9 0.045 1.5E-06 51.8 7.0 143 156-313 69-238 (271)
14 2nn3_C Caspase-1; cysteine pro 94.8 0.067 2.3E-06 51.8 7.9 140 156-311 104-262 (310)
15 2h54_A Caspase-1; allosteric s 94.1 0.13 4.4E-06 45.9 7.5 79 157-240 86-170 (178)
16 2fp3_A Caspase NC; apoptosis, 93.9 0.095 3.2E-06 50.7 6.9 144 156-313 104-287 (316)
17 1pyo_A Caspase-2; apoptosis, c 89.2 0.48 1.6E-05 41.7 5.4 104 102-240 54-158 (167)
18 3uoa_B Mucosa-associated lymph 89.1 1.8 6E-05 43.2 9.9 113 23-196 4-130 (390)
19 3h11_A CAsp8 and FADD-like apo 88.6 1.5 5E-05 41.5 8.6 141 156-311 74-244 (272)
20 1qtn_A Caspase-8; apoptosis, d 88.2 0.43 1.5E-05 41.9 4.3 103 102-240 51-154 (164)
21 2dko_A Caspase-3; low barrier 82.2 0.73 2.5E-05 39.6 2.8 102 102-240 37-139 (146)
22 3bij_A Uncharacterized protein 78.8 1.6 5.5E-05 41.0 4.2 34 157-197 54-87 (285)
23 3p45_A Caspase-6; protease, hu 78.1 1.8 6.3E-05 38.6 4.1 102 102-240 65-167 (179)
24 4af8_A Metacaspase MCA2; hydro 75.9 4.8 0.00016 39.7 6.8 35 156-197 147-181 (367)
25 4f6o_A Metacaspase-1; rossmann 75.5 2 6.7E-05 42.2 3.8 82 157-262 108-199 (350)
26 2ql9_A Caspase-7; cysteine pro 74.1 1.9 6.6E-05 38.2 3.1 102 102-240 65-167 (173)
27 2h1v_A Ferrochelatase; rossman 42.7 69 0.0024 30.2 7.9 79 136-232 175-254 (310)
28 2h54_A Caspase-1; allosteric s 33.2 43 0.0015 29.4 4.4 120 24-197 43-170 (178)
No 1
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}
Probab=99.38 E-value=1.5e-12 Score=124.80 Aligned_cols=188 Identities=16% Similarity=0.210 Sum_probs=123.2
Q ss_pred CCcEEEEEeCCCC-------CCC-cc-hhhhHHHHHHHHHhCCCCCCCEEEEecCCCCCCCCCCCCCeeeeCCCCCCCcc
Q psy6307 23 SNNWAVLVDTSRF-------WFN-YR-HVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVY 93 (368)
Q Consensus 23 ~~~wAVlvagS~~-------w~N-YR-Hqadv~~~Y~~L~~~Gi~d~~Ii~m~~DDia~n~~Np~pG~i~n~~~~~~nvy 93 (368)
.++||+||.-+++ |.. -+ =..|+..|.+.|++.|++ |++++-++
T Consensus 2 ~~~~ALlIGi~~Y~~~~Y~~~~~~L~~~~nDa~~~~~~L~~~Gf~---v~~l~~~~------------------------ 54 (285)
T 3bij_A 2 PKGIALALGLNAVDPKHYGGWAGKLNACEADAEDMAAIAAERGFA---VTTLMTKA------------------------ 54 (285)
T ss_dssp CCEEEEEEECSCCCTTTTTTCCCCCSSHHHHHHHHHHHHHHTTCE---EEEEEGGG------------------------
T ss_pred CceEEEEEEeCCccccccCCCcccCCCCHHHHHHHHHHHHHcCCc---eEEecCCc------------------------
Confidence 4679999998763 211 11 146999999999999996 66554221
Q ss_pred CCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCcccccCCCccEEEEecCCCCCCccccCCCcccCHHHHHHHHHHHhhh
Q psy6307 94 GEDVEVDYRGYEVTVENFIRLLTGRLPPSTPRSKQLLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQK 173 (368)
Q Consensus 94 ~~~v~iDY~g~~vt~enfl~vL~G~~~~~~p~~k~l~s~~~d~vfiy~tgHG~~g~i~~~~~~~vt~~~f~~~L~~~~~~ 173 (368)
.|.+|+++.|..-. + ...++|.+|+||+|||... .-.+|++
T Consensus 55 ------------~t~~~i~~al~~l~-------~--~~~~~D~~~~yfSGHG~~~--~~~~g~e---------------- 95 (285)
T 3bij_A 55 ------------ATRAKVIDAIGKAA-------K--ALGKGDIFMLSYSGHGGQV--PDTSNDE---------------- 95 (285)
T ss_dssp ------------CCHHHHHHHHHHHH-------H--HCCTTCEEEEEEESCEEEE--ECTTSCC----------------
T ss_pred ------------cCHHHHHHHHHHHH-------H--hCCCCCEEEEEEcCCcccc--cCCCCCc----------------
Confidence 46677776664211 1 1256799999999999731 0011110
Q ss_pred ccccccccCCCceEEEEEeecCCCCccccCCCCCCCHHHHHHHHHHHHHhcccceEEEEeeccccccccccc--------
Q psy6307 174 RRYHELLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEVFFMIDTCQASSMYEKF-------- 245 (368)
Q Consensus 174 ~~yk~L~~~~~d~vFvY~s~HGg~~~~~~~~~~~l~~~dL~~~L~~M~~k~~y~~lv~iidAC~SGSm~~~l-------- 245 (368)
.| |-++++...+. .+..++|.+.|+.| ..-+++++|+|||+||++.+.+
T Consensus 96 ----------~d---------g~~~~l~p~D~-~i~~~~l~~~l~~l---~~~~~~~vilD~C~SG~~~~~~p~~~~~~~ 152 (285)
T 3bij_A 96 ----------PD---------GVDETWCLFDG-ELIDDELYALLGKF---AAGVRVLVFSDSCHSGTVVKMAYYNGTTAA 152 (285)
T ss_dssp ----------TT---------CEEEEEECSSS-EEEHHHHHHHHTTS---CSSCEEEEEEECCCCCCHHHHHHTTC----
T ss_pred ----------cC---------CCcceEEecCC-CccHHHHHHHHHhc---cCCCeEEEEEecCCCCcccccccccccccc
Confidence 00 11122222222 35567888877655 2357899999999999887620
Q ss_pred ---------------------------------------------CCCcEEEEEecCCCCcccCCCCCCCCcceeeccch
Q psy6307 246 ---------------------------------------------YSPNILAMASSLVGEDSLSHHVDPAIGVYIIDRYT 280 (368)
Q Consensus 246 ---------------------------------------------~~~nV~~itAS~~~EsSys~~~d~~ig~~l~D~FT 280 (368)
.+.++++++|+.++|.|+... ..+.||
T Consensus 153 ~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~i~lsa~~~~q~A~e~~--------~~G~FT 224 (285)
T 3bij_A 153 RSAGPDEGEIRYRAMPQSVAMRTYRANREFYDTIQQKTKKVDLADVKASILLISGCQDNQLSQDGA--------FNGAFT 224 (285)
T ss_dssp ---------CEESBCCHHHHHHHHHHTHHHHHHHHHHCCCCCTTTCSSEEEEEESSCTTSCCEECS--------SSCHHH
T ss_pred ccccccccccceeecCchhhhhhhhcchhHHHHHhhhcccccccCCCCCEEEEEeCCCCccccccc--------cCCHHH
Confidence 123688999999999998521 246899
Q ss_pred HHHHHHHhcccCCChhhHHHHHhhccCcc
Q psy6307 281 YYALEFLEDVHLDSAKTMEDFLAVCPKRV 309 (368)
Q Consensus 281 y~~~~~le~~~~~~~~Tl~~lf~~v~~~~ 309 (368)
+++++-|+.. ....|+.++++++++.+
T Consensus 225 ~aLl~~L~~~--~~~~s~~~l~~~v~~~~ 251 (285)
T 3bij_A 225 GQLLRVWKNG--LYKGSYRSFHKAIVRRM 251 (285)
T ss_dssp HHHHHHHGGG--TCCSCHHHHHHHHHHHS
T ss_pred HHHHHHHhhC--CCCcCHHHHHHHHHHhc
Confidence 9999988763 34679999999997654
No 2
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A
Probab=99.32 E-value=1.1e-11 Score=123.22 Aligned_cols=211 Identities=11% Similarity=0.150 Sum_probs=134.2
Q ss_pred cCCCCcEEEEEeCCCCC--CCcch-hhhHHHHHHHHHhCCCCCCCEEEEecCCCCCCCCCCCCCeeeeCCCCCCCccCCC
Q psy6307 20 AKHSNNWAVLVDTSRFW--FNYRH-VANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGED 96 (368)
Q Consensus 20 ~~~~~~wAVlvagS~~w--~NYRH-qadv~~~Y~~L~~~Gi~d~~Ii~m~~DDia~n~~Np~pG~i~n~~~~~~nvy~~~ 96 (368)
+...++||+||.-+.+= .+-+- ..|+-.|.+.|++.|++.++|+++.-++- .|+
T Consensus 88 ~~~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~GF~~~~i~~L~D~~~-------~p~---------------- 144 (367)
T 4af8_A 88 LPGQTVRALFIGINYYGTSAALSGCCNDVKQMLATLQKRGLPINEAVILVDEDN-------FPG---------------- 144 (367)
T ss_dssp CTTCCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHTTCCCSEEEEEECCTT-------CTT----------------
T ss_pred CCCCCeEEEEEEeCCCCCccCCCCHHHHHHHHHHHHHHcCCCchheEEeccccc-------ccc----------------
Confidence 35678999999987431 11111 45999999999999999999987753321 111
Q ss_pred ccccCCCCCCCHHHHHHHHcCCCCCCCCCCcccccCCCccEEEEecCCCCCCccccCCCcccCHHHHHHHHHHHhhhccc
Q psy6307 97 VEVDYRGYEVTVENFIRLLTGRLPPSTPRSKQLLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRY 176 (368)
Q Consensus 97 v~iDY~g~~vt~enfl~vL~G~~~~~~p~~k~l~s~~~d~vfiy~tgHG~~g~i~~~~~~~vt~~~f~~~L~~~~~~~~y 176 (368)
.....|.+|+++.|.--. -...++|.+|+||+|||..- ++.. .+ ..
T Consensus 145 -----~~~~pTr~nI~~aL~~L~---------~~a~pgD~l~fyFSGHG~q~----~d~~---de-----------~d-- 190 (367)
T 4af8_A 145 -----RTDQPTRDNIVRYMAWLV---------KDAKPGDVLFFHYSGHGTQC----KSRG---DS-----------DE-- 190 (367)
T ss_dssp -----CCBCCCHHHHHHHHHHHH---------HTCCTTCEEEEEEESCEEEE----CCC---------------------
T ss_pred -----cccCCCHHHHHHHHHHHH---------HhCCCCCEEEEEEcCCcCcc----CCCC---CC-----------CC--
Confidence 123568888888774211 01357899999999999841 1110 00 00
Q ss_pred cccccCCCceEEEEEeecCCCCccccCCC---CCCCHHHHHHHH-HHHHHhcccceEEEEeecccccccccccC------
Q psy6307 177 HELLTDEGSNILIYLTGHGGDGFLKFQDS---EEVTSQELGDAL-EQMWQKRRYHEVFFMIDTCQASSMYEKFY------ 246 (368)
Q Consensus 177 k~L~~~~~d~vFvY~s~HGg~~~~~~~~~---~~l~~~dL~~~L-~~M~~k~~y~~lv~iidAC~SGSm~~~l~------ 246 (368)
|-+..+...|. ..|..+||.+.| +.+ ..-.++++|+|+||||++.+.-.
T Consensus 191 ------------------g~De~LvP~D~~~~g~I~ddeL~~lLv~~l---~~g~~v~vIlD~ChSGt~~dlp~~~~~r~ 249 (367)
T 4af8_A 191 ------------------KYDQCIAPVDFQKSGCIVDDDIHKLLFSRL---PEKVRLTAVFDCGHSGSIMDLPFTYVCSG 249 (367)
T ss_dssp ------------------CCEEEECCTTHHHHCCEEHHHHHHHHTTTC---CTTCEEEEEEECTTCCCCTTCSEEEECCT
T ss_pred ------------------CcceEEEeecCCcCCCccHHHHHHHHHHhc---cCCCEEEEEEeCCCCCccccccccccccc
Confidence 11112222221 246677888763 332 12368999999999999977321
Q ss_pred -------------------CCcEEEEEecCCCCcccCCCCCCCC---cceeeccchHHHHHHHhcccCCChhhHHHHHhh
Q psy6307 247 -------------------SPNILAMASSLVGEDSLSHHVDPAI---GVYIIDRYTYYALEFLEDVHLDSAKTMEDFLAV 304 (368)
Q Consensus 247 -------------------~~nV~~itAS~~~EsSys~~~d~~i---g~~l~D~FTy~~~~~le~~~~~~~~Tl~~lf~~ 304 (368)
+.+++.++|+..+|.|......... +..-.+.|||++++.|++ .+..|..++++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~vi~~Sac~d~QtSad~~~~~~f~~g~~~~~GafTyali~~L~~---~~~~Ty~~Ll~~ 326 (367)
T 4af8_A 250 GEQASGTPHMKRIREGNDVLGDVMMISGCADEQTSADVKNTATFGTGSTGAGGAATQCITCMLMN---NQSLSYGKLLIE 326 (367)
T ss_dssp TCCTTSCCCCEECSSCCCCCSEEEEEEEECCCSCCCCCC-------CCCBCBSHHHHHHHHHHHC---CSCCBHHHHHHH
T ss_pred ccccccchhhhhhccCCCCCCCEEEEEecCCCCchhhhhccccccccccCcccHHHHHHHHHHHh---CCCCCHHHHHHH
Confidence 1257899999999999864321111 123467899999999986 366799999999
Q ss_pred ccCcccc
Q psy6307 305 CPKRVCI 311 (368)
Q Consensus 305 v~~~~~~ 311 (368)
++..+..
T Consensus 327 vr~~l~~ 333 (367)
T 4af8_A 327 TRDMLKR 333 (367)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8776653
No 3
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=99.12 E-value=3.7e-10 Score=111.63 Aligned_cols=204 Identities=13% Similarity=0.185 Sum_probs=121.0
Q ss_pred CCCCcEEEEEeCCCC--CCCcc-hhhhHHHHHHHHHhC-CCCCCCEEEEecCCCCCCCCCCCCCeeeeCCCCCCCccCCC
Q psy6307 21 KHSNNWAVLVDTSRF--WFNYR-HVANVLSIYRSVKRL-GIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGED 96 (368)
Q Consensus 21 ~~~~~wAVlvagS~~--w~NYR-Hqadv~~~Y~~L~~~-Gi~d~~Ii~m~~DDia~n~~Np~pG~i~n~~~~~~nvy~~~ 96 (368)
...++||+||.-+.+ +.+-+ =..|+-.|...|++. |+++++|+++.-++ ++ +
T Consensus 50 ~~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~~Gf~~~~I~lLtd~~-----~~---------~---------- 105 (350)
T 4f6o_A 50 CTGRRKALIIGINYIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQ-----ND---------L---------- 105 (350)
T ss_dssp CCSCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHHSCCCGGGEEEEETTS-----SC---------G----------
T ss_pred CCCCEEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCccceeeecccc-----cc---------c----------
Confidence 456889999998632 11111 135899999999975 99999998765322 01 0
Q ss_pred ccccCCCCCCCHHHHHHHHcCCCCCCCCCCcccccCCCccEEEEecCCCCCCccccCCCcccCHHHHHHHHHHHhhhccc
Q psy6307 97 VEVDYRGYEVTVENFIRLLTGRLPPSTPRSKQLLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRY 176 (368)
Q Consensus 97 v~iDY~g~~vt~enfl~vL~G~~~~~~p~~k~l~s~~~d~vfiy~tgHG~~g~i~~~~~~~vt~~~f~~~L~~~~~~~~y 176 (368)
....|.+|+++.|.--.. ...++|.+|+||+|||.. +.-.+|++
T Consensus 106 ------~~~pTr~nI~~aL~~L~~---------~a~pgD~llfYFSGHG~q--~~d~~gdE------------------- 149 (350)
T 4f6o_A 106 ------VRVPTRANMIRAMQWLVK---------DAQPNDSLFLHYSGHGGQ--TEDLDGDE------------------- 149 (350)
T ss_dssp ------GGSCCHHHHHHHHHHHHT---------TCCTTCEEEEEEESCEEE--C--------------------------
T ss_pred ------ccCCCHHHHHHHHHHHHH---------hCCCCCEEEEEEcCCcee--ccCCCCCc-------------------
Confidence 123688888888752110 125789999999999984 11112211
Q ss_pred cccccCCCceEEEEEeecCCCCccccCCC---CCCCHHHHHHHHHHHHHhcccceEEEEeeccccccccccc--------
Q psy6307 177 HELLTDEGSNILIYLTGHGGDGFLKFQDS---EEVTSQELGDALEQMWQKRRYHEVFFMIDTCQASSMYEKF-------- 245 (368)
Q Consensus 177 k~L~~~~~d~vFvY~s~HGg~~~~~~~~~---~~l~~~dL~~~L~~M~~k~~y~~lv~iidAC~SGSm~~~l-------- 245 (368)
..|-++.+...|. ..|..+||.+.|.+. ...-.++++|+|+||||++.+.-
T Consensus 150 ----------------~dG~De~lvP~D~~~~g~I~ddeL~~~L~~~--l~~g~~vt~IlD~ChSGt~ldlp~~~~~~g~ 211 (350)
T 4f6o_A 150 ----------------EDGMDDVIYPVDFETQGPIIDDEMHDIMVKP--LQQGVRLTALFDSCHSGTVLDLPYTYSTKGI 211 (350)
T ss_dssp --------------------CEEECCTTHHHHCCEEHHHHHHHHTTT--CCTTCEEEEEECSSSCTTTTCCSEEEETTEE
T ss_pred ----------------ccCCceEEEeccCCcCCcccHHHHHHHHHhh--cCCCCeEEEEEccCCCCcccccccccccccc
Confidence 0122233333332 247788888876532 12346899999999999997421
Q ss_pred -C---------------------------------------------------------CCcEEEEEecCCCCcccCCCC
Q psy6307 246 -Y---------------------------------------------------------SPNILAMASSLVGEDSLSHHV 267 (368)
Q Consensus 246 -~---------------------------------------------------------~~nV~~itAS~~~EsSys~~~ 267 (368)
. +-+++.++++..+|+|....
T Consensus 212 ~~e~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~SgCkD~QtSaD~~- 290 (350)
T 4f6o_A 212 IKEPNIWKDVGQDGLQAAISYATGNRAALIGSLGSIFKTVKGGMGNNVDRERVRQIKFSAADVVMLSGSKDNQTSADAV- 290 (350)
T ss_dssp EECCCC---------------------------------------------------CCCSEEEEEEEEC----------
T ss_pred cCcchhhhhccccccchhhhhccccchhhcccchhhhhhhccccccccchhhhhhccCCCCCEEEEEecCCCCchhhhc-
Confidence 0 11455666666666666333
Q ss_pred CCCCcceeeccchHHHHHHHhcccCCChhhHHHHHhhccCcc
Q psy6307 268 DPAIGVYIIDRYTYYALEFLEDVHLDSAKTMEDFLAVCPKRV 309 (368)
Q Consensus 268 d~~ig~~l~D~FTy~~~~~le~~~~~~~~Tl~~lf~~v~~~~ 309 (368)
++--..+-|||.+++.|+. ++..|..++++.++...
T Consensus 291 ---~~g~~~GAmTyafi~aL~~---~p~~tY~~Ll~~~r~~L 326 (350)
T 4f6o_A 291 ---EDGQNTGAMSHAFIKVMTL---QPQQSYLSLLQNMRKEL 326 (350)
T ss_dssp -------CCCHHHHHHHHHHHH---CCCCBHHHHHHHHHHHH
T ss_pred ---cCCceeehhHHHHHHHHHH---CCCCCHHHHHHHHHHHH
Confidence 2223467899999999986 47789999999887754
No 4
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A*
Probab=98.48 E-value=3e-07 Score=92.08 Aligned_cols=133 Identities=17% Similarity=0.289 Sum_probs=93.9
Q ss_pred cCHHHHHHHHHHHhhhccccccccCCCceEEEEEeecCCC----CccccCCCC-------CCCHHHHHHHHHHHHHhccc
Q psy6307 158 VTSQELGDALEQMWQKRRYHELLTDEGSNILIYLTGHGGD----GFLKFQDSE-------EVTSQELGDALEQMWQKRRY 226 (368)
Q Consensus 158 vt~~~f~~~L~~~~~~~~yk~L~~~~~d~vFvY~s~HGg~----~~~~~~~~~-------~l~~~dL~~~L~~M~~k~~y 226 (368)
+|.+++.++|+...+. ..+.|.+++||+|||.. +|+...|.. .++.++|.+.|+. ..-
T Consensus 49 lT~~eI~~aL~~f~~~-------~~~~D~~l~yfsGHG~~~~g~~yL~p~Da~~~~~~~~~isl~~Ll~~l~~----~~~ 117 (390)
T 3uoa_B 49 LTEYEMRNAVDEFLLL-------LDKGVYGLLYYAGHGYENFGNSFMVPVDAPNPYRSENCLCVQNILKLMQE----KET 117 (390)
T ss_dssp CCHHHHHHHHHHHHHT-------CCTTCEEEEEEESCEEEETTEEEECCTTCCSSCCGGGSEEHHHHHHHHHH----TTC
T ss_pred CCHHHHHHHHHHHHhh-------CCCCCEEEEEEecCccccCCcceEEecCCCccccccceeeHHHHHHHHHh----cCC
Confidence 5788888888865432 24679999999999954 565554432 4666677665553 466
Q ss_pred ceEEEEeeccccccccccc-------C-CCcEEEEEecCCCCcccCCCCCCCCcceeeccchHHHHHHHhcccCCChhhH
Q psy6307 227 HEVFFMIDTCQASSMYEKF-------Y-SPNILAMASSLVGEDSLSHHVDPAIGVYIIDRYTYYALEFLEDVHLDSAKTM 298 (368)
Q Consensus 227 ~~lv~iidAC~SGSm~~~l-------~-~~nV~~itAS~~~EsSys~~~d~~ig~~l~D~FTy~~~~~le~~~~~~~~Tl 298 (368)
|..||++|||+++..++.. . ..++++..|+.+++.||....++.- ++.|++.+++.|++ ..+|
T Consensus 118 K~kL~ILDACrg~~~~~~~~~~~~~ip~~ad~Li~yAT~pG~~A~r~~~d~~~----gS~FtqaL~e~L~~-----~~dl 188 (390)
T 3uoa_B 118 GLNVFLLDMCRKRNDYDDTIPILDALKVTANIVFGYATCQGAEAFEIQHSGLA----NGIFMKFLKDRLLE-----DKKI 188 (390)
T ss_dssp SEEEEEEESCCCCCTTCCCCCCCCCCCCCSCEEEEESSCTTCCCEECSSCTTC----CCHHHHHHTTTTTC-----SSCH
T ss_pred CceEEEEECCCCCCcccccccccccCcccCCcEEEEEcCCCcEeeecCCCCCC----CCHHHHHHHHHHcc-----CCCH
Confidence 7889999999996444321 1 2488899999999999965433222 45677766666653 5789
Q ss_pred HHHHhhccCccc
Q psy6307 299 EDFLAVCPKRVC 310 (368)
Q Consensus 299 ~~lf~~v~~~~~ 310 (368)
.+++..|..++.
T Consensus 189 ~~LLt~Vn~~Va 200 (390)
T 3uoa_B 189 TVLLDEVAEDMG 200 (390)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999988875
No 5
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=95.55 E-value=0.012 Score=55.03 Aligned_cols=141 Identities=13% Similarity=0.206 Sum_probs=86.3
Q ss_pred cccCHHHHHHHHHHHhhhccccccccCCCceEEEEEeecCCCCccccCCCCCCCHHHHHHHHHHHH-HhcccceEEEEee
Q psy6307 156 EEVTSQELGDALEQMWQKRRYHELLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMW-QKRRYHEVFFMID 234 (368)
Q Consensus 156 ~~vt~~~f~~~L~~~~~~~~yk~L~~~~~d~vFvY~s~HGg~~~~~~~~~~~l~~~dL~~~L~~M~-~k~~y~~lv~iid 234 (368)
+.++.+++.++|+.-.+. .-...|.+++|+.+||..|.+.-.|+ .+.-++|.+.|+.-. ..-.-|=.||+++
T Consensus 61 ~dlt~~em~~~l~~~~~~------~~~~~d~~v~~~lsHG~~g~i~~~D~-~v~l~~i~~~f~~~~cp~L~gKPKlf~iq 133 (250)
T 2j32_A 61 NDLTREEIVELMRDVSKE------DHSKRSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFFRGDRCRSLTGKPKLFIIQ 133 (250)
T ss_dssp ESCCHHHHHHHHHHHHTS------CCTTEEEEEEEEESCEETTEEEETTE-EEEHHHHHHTTSTTTCGGGTTSCEEEEEE
T ss_pred eCCCHHHHHHHHHHHHHh------hccCCCEEEEEECCCCCCCeEEecCC-cEEHHHHHHHhccccChhHcCCCeEEEEe
Confidence 357888888888765432 22456889999999999998776665 676566555443200 0012344689999
Q ss_pred cccccccccc---------------cC-CCcEEEEEecCCCCcccCCCCCCCCcceeeccchHHHHHHHhcccCCChhhH
Q psy6307 235 TCQASSMYEK---------------FY-SPNILAMASSLVGEDSLSHHVDPAIGVYIIDRYTYYALEFLEDVHLDSAKTM 298 (368)
Q Consensus 235 AC~SGSm~~~---------------l~-~~nV~~itAS~~~EsSys~~~d~~ig~~l~D~FTy~~~~~le~~~~~~~~Tl 298 (368)
||...-+-.. +. ..++++.=|+.++.-||-. +..| ..|.-.+++-|++ ..+...|
T Consensus 134 ACRg~~~~~g~~~~~~~~~~~~~~~ip~~aD~Li~ysT~pG~vs~r~---~~~g----S~fiq~L~~~l~~--~~~~~dl 204 (250)
T 2j32_A 134 ACRGTELDCGIATDSGVDDDMACHKIPVEADFLYAYSTAPGYYSWRN---SKDG----SWFIQSLCAMLKQ--YADKLEF 204 (250)
T ss_dssp SCSEEECBCCCCC----------CCCCTTTTEEEEESSCTEECCEEE---TTTE----EHHHHHHHHHHHH--HTTTSCH
T ss_pred cccCCcccCCccccCCccccccccccCCCCCEEEEEeCCCccEEecC---CCCC----cHHHHHHHHHHHH--hCCCCCH
Confidence 9985432111 11 1267777777777777632 2223 3344444555543 2356789
Q ss_pred HHHHhhccCccccc
Q psy6307 299 EDFLAVCPKRVCIS 312 (368)
Q Consensus 299 ~~lf~~v~~~~~~S 312 (368)
.++|..|+.+|...
T Consensus 205 ~~ilt~V~~~V~~~ 218 (250)
T 2j32_A 205 MHILTRVNRKVATE 218 (250)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999888887654
No 6
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=95.44 E-value=0.034 Score=52.87 Aligned_cols=143 Identities=15% Similarity=0.188 Sum_probs=87.9
Q ss_pred cccCHHHHHHHHHHHhhhccccccccCCCceEEEEEeecCCCCccccCCCCCCCHHHHHHHHHHHH-HhcccceEEEEee
Q psy6307 156 EEVTSQELGDALEQMWQKRRYHELLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMW-QKRRYHEVFFMID 234 (368)
Q Consensus 156 ~~vt~~~f~~~L~~~~~~~~yk~L~~~~~d~vFvY~s~HGg~~~~~~~~~~~l~~~dL~~~L~~M~-~k~~y~~lv~iid 234 (368)
+.+|.+++.++|+.-.+. .-...|.+++++.+||..+.+.-.|+. +.-++|.+.|..-. ..-.=|=.||+++
T Consensus 66 ~dlt~~em~~~l~~~~~~------~h~~~d~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL~gKPKlffiQ 138 (278)
T 3od5_A 66 NDLKAEELLLKIHEVSTV------SHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLVGKPKIFIIQ 138 (278)
T ss_dssp ESCCHHHHHHHHHHHHHS------CCTTBSCEEEEEESCEETTEEECSSSE-EEHHHHHHTTSTTTCGGGTTSCEEEEEE
T ss_pred cCCCHHHHHHHHHHHHhh------cccCCCEEEEEEECCCCCCEEEEeCCe-EEHHHHHHHhccccChhhcCCCcEEEEe
Confidence 468899999999875221 124668899999999999998887775 76666665443100 0012345689999
Q ss_pred cccccccccccC---------------------------C--CcEEEEEecCCCCcccCCCCCCCCcceeeccchHHHHH
Q psy6307 235 TCQASSMYEKFY---------------------------S--PNILAMASSLVGEDSLSHHVDPAIGVYIIDRYTYYALE 285 (368)
Q Consensus 235 AC~SGSm~~~l~---------------------------~--~nV~~itAS~~~EsSys~~~d~~ig~~l~D~FTy~~~~ 285 (368)
||...-.-.... + .++++.=|+.++.-||-. +.-| ..|.-.+++
T Consensus 139 ACRG~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~iP~~aD~Li~yST~pG~vs~R~---~~~G----S~fIq~L~~ 211 (278)
T 3od5_A 139 ACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRE---TVNG----SWYIQDLCE 211 (278)
T ss_dssp SCCSSBCBCEECCC---------------------CCCEETTTTEEEEESSCTTBCCEEE---TTTE----EHHHHHHHH
T ss_pred cCCCCcccCCeecccccccccccccccccccccccccccCCCCCeEEEEeCCCCeEEecC---CCCC----cHHHHHHHH
Confidence 999654322211 0 255565666666666532 2222 233333444
Q ss_pred HHhcccCCChhhHHHHHhhccCcccccCc
Q psy6307 286 FLEDVHLDSAKTMEDFLAVCPKRVCISTI 314 (368)
Q Consensus 286 ~le~~~~~~~~Tl~~lf~~v~~~~~~S~~ 314 (368)
-|+. ..+...|.++|..|+.+|.....
T Consensus 212 ~l~~--~~~~~dl~~ilt~Vn~~V~~~~~ 238 (278)
T 3od5_A 212 MLGK--YGSSLEFTELLTLVNRKVSQRRV 238 (278)
T ss_dssp HHHH--HTTTSCHHHHHHHHHHHHHHCCC
T ss_pred HHHh--hCCCCCHHHHHHHHHHHHHHHhh
Confidence 4443 23567899999999998876654
No 7
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A*
Probab=95.25 E-value=0.027 Score=54.42 Aligned_cols=140 Identities=15% Similarity=0.215 Sum_probs=84.2
Q ss_pred ccCHHHHHHHHHHHhhhccccccccCCCceEEEEEeecCCCCccccCCCCCCCHHHHHHHHHHHH-HhcccceEEEEeec
Q psy6307 157 EVTSQELGDALEQMWQKRRYHELLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMW-QKRRYHEVFFMIDT 235 (368)
Q Consensus 157 ~vt~~~f~~~L~~~~~~~~yk~L~~~~~d~vFvY~s~HGg~~~~~~~~~~~l~~~dL~~~L~~M~-~k~~y~~lv~iidA 235 (368)
.++.+++.++|+.-.+. .-...|.+++|+.+||..+++.-.|. .+.-++|...|..-. ..-.-|=.||+++|
T Consensus 115 dlt~~em~~~l~~~~~~------~h~~~d~~vv~ilsHG~~~~i~g~D~-~v~l~~I~~~f~~~~CpsL~gKPKlffiQA 187 (305)
T 1f1j_A 115 DCSCAKMQDLLKKASEE------DHTNAACFACILLSHGEENVIYGKDG-VTPIKDLTAHFRGDRSKTLLEKPKLFFIQA 187 (305)
T ss_dssp SCCHHHHHHHHHHHHHS------CGGGEEEEEEEEESCEETTEEECSSS-EEEHHHHHHTTSTTTCGGGTTSCEEEEEES
T ss_pred CcCHHHHHHHHHHHHHh------hcCCCCEEEEEEecCCCCCeEEecCC-eEEHHHHHHHhhhccChhhcCCceEEEecc
Confidence 46677777777664321 12345788899999999998877775 565555554332100 00122446899999
Q ss_pred cccccccccc------------------C-CCcEEEEEecCCCCcccCCCCCCCCcceeeccchHHHHHHHhcccCCChh
Q psy6307 236 CQASSMYEKF------------------Y-SPNILAMASSLVGEDSLSHHVDPAIGVYIIDRYTYYALEFLEDVHLDSAK 296 (368)
Q Consensus 236 C~SGSm~~~l------------------~-~~nV~~itAS~~~EsSys~~~d~~ig~~l~D~FTy~~~~~le~~~~~~~~ 296 (368)
|...-+-... . ..++++.=|+.++.-||-. +.-| ..|.-.+++-|+. .....
T Consensus 188 CRG~~~~~g~~~~~~~~~~~~~~~~~~ip~~aD~LiayST~pG~vs~r~---~~~G----S~FiqaL~~~l~~--~~~~~ 258 (305)
T 1f1j_A 188 CRGTELDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSWRS---PGRG----SWFVQALCSILEE--HGKDL 258 (305)
T ss_dssp CCSSBCBCCBC---------------CBCTTTTEEEEESSCTTBCCEEE---TTTE----EHHHHHHHHHHHH--HTTTS
T ss_pred ccCCcccCCccccCCcccccccccccccCCCCCEEEEEECCCCeeccCC---CCCC----CHHHHHHHHHHHh--hCCCC
Confidence 9865432211 1 1267777777777777732 2222 3444445555544 23557
Q ss_pred hHHHHHhhccCccccc
Q psy6307 297 TMEDFLAVCPKRVCIS 312 (368)
Q Consensus 297 Tl~~lf~~v~~~~~~S 312 (368)
.|.++|..|+.+|...
T Consensus 259 dl~~ilt~Vn~~V~~~ 274 (305)
T 1f1j_A 259 EIMQILTRVNDRVARH 274 (305)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 8999999888887654
No 8
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=95.24 E-value=0.084 Score=50.80 Aligned_cols=141 Identities=12% Similarity=0.144 Sum_probs=81.1
Q ss_pred ccCHHHHHHHHHHHhhhccccccccCCCceEEEEEeecCCCCccccCCC-----CCCCHHHHHHHHHHHH-HhcccceEE
Q psy6307 157 EVTSQELGDALEQMWQKRRYHELLTDEGSNILIYLTGHGGDGFLKFQDS-----EEVTSQELGDALEQMW-QKRRYHEVF 230 (368)
Q Consensus 157 ~vt~~~f~~~L~~~~~~~~yk~L~~~~~d~vFvY~s~HGg~~~~~~~~~-----~~l~~~dL~~~L~~M~-~k~~y~~lv 230 (368)
.+|.+++.++|+.--+ +..-...|.+++++.+||..+.+.-.+. ..+.-++|.+.|+.-. ..-.-|=.|
T Consensus 103 dlt~~em~~~l~~f~~-----~~dh~~~d~~vv~~lsHG~~~~i~g~D~~~~~~~~v~l~~I~~~F~~~~CpsL~gKPKl 177 (302)
T 3e4c_A 103 NLTASDMTTELEAFAH-----RPEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKDKPKV 177 (302)
T ss_dssp SCCHHHHHHHHHHHHT-----CGGGGGCSCEEEEEEEEEETTEEECTTCCSSSCCEECHHHHHHHTSTTTCGGGTTSCEE
T ss_pred CCCHHHHHHHHHHHHh-----hhccCCCCEEEEEEeccCcCCeEEeecccccCCcEEEHHHHHHHHhhhcchhhcCCccE
Confidence 4566666666654322 1122345788899999999987665553 4576666665543100 000334568
Q ss_pred EEeeccccccccccc---------------------------C-CCcEEEEEecCCCCcccCCCCCCCCcceeeccchHH
Q psy6307 231 FMIDTCQASSMYEKF---------------------------Y-SPNILAMASSLVGEDSLSHHVDPAIGVYIIDRYTYY 282 (368)
Q Consensus 231 ~iidAC~SGSm~~~l---------------------------~-~~nV~~itAS~~~EsSys~~~d~~ig~~l~D~FTy~ 282 (368)
|+++||...-.-..+ . ..++++.-|+.++.-||-. +..| ..|.-.
T Consensus 178 ffIQACRG~~~~~~~~~ds~~~~~~~~~~~~~~~~~d~~~~ip~~aDfLi~yST~pG~vS~R~---~~~G----SwFIqa 250 (302)
T 3e4c_A 178 IIIQAARGDSPGVVWFKDSVGVSGNLSLPTTEEFEDDAIKKAHIEKDFIAFCSSTPDNVSWRH---PTMG----SVFIGR 250 (302)
T ss_dssp EEEEEECSSSCCCCCCCCC--------CCCCCCCCCHHHHTSCSSCSEEEEEECCCCCCCSSS---TTCC----CHHHHH
T ss_pred EEEECCCCCCCCcceeccCcccccccccccccccccccccccCCCCCEEEEEeCCCCceeecC---CCCC----cHHHHH
Confidence 999999965442111 0 1256666666777777732 2333 234434
Q ss_pred HHHHHhcccCCChhhHHHHHhhccCcccc
Q psy6307 283 ALEFLEDVHLDSAKTMEDFLAVCPKRVCI 311 (368)
Q Consensus 283 ~~~~le~~~~~~~~Tl~~lf~~v~~~~~~ 311 (368)
+++-|++ ..+...|.++|..|+.++..
T Consensus 251 L~~~l~~--~~~~~dl~~il~~V~~~v~~ 277 (302)
T 3e4c_A 251 LIEHMQE--YACSCDVEEIFRKVRFSFEQ 277 (302)
T ss_dssp HHHHHHH--HTTTSCHHHHHHHHHHHTSS
T ss_pred HHHHHHH--hCCCCCHHHHHHHHHHHHhC
Confidence 4444543 23556899999998877654
No 9
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A
Probab=95.14 E-value=0.036 Score=52.09 Aligned_cols=162 Identities=17% Similarity=0.249 Sum_probs=95.9
Q ss_pred CCCCCCHHHHHHHHcCCCCCCCCCCcccccCCCccEEEEecCCCCCCccccCCCcccCHHHHHHHHHHHhhhcccccccc
Q psy6307 102 RGYEVTVENFIRLLTGRLPPSTPRSKQLLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHELLT 181 (368)
Q Consensus 102 ~g~~vt~enfl~vL~G~~~~~~p~~k~l~s~~~d~vfiy~tgHG~~g~i~~~~~~~vt~~~f~~~L~~~~~~~~yk~L~~ 181 (368)
.|.++.++++-++|++-- - .|.++ +.+|.+++.++|+.--+. .-
T Consensus 40 ~G~~~D~~~L~~~f~~LG-------------F--~V~~~---------------~dlt~~em~~~l~~~~~~------~h 83 (259)
T 3sir_A 40 AGTNVDCENLTRVLKQLD-------------F--EVTVY---------------KDCRYKDILRTIEYSASQ------NH 83 (259)
T ss_dssp ---CCHHHHHHHHHHHTT-------------C--EEEEE---------------EECSHHHHHHHHHHHHTS------CC
T ss_pred CCcHHHHHHHHHHHHHCC-------------C--EEEEE---------------eCCCHHHHHHHHHHHHHh------hc
Confidence 377788888888886421 1 13333 467888888888875321 23
Q ss_pred CCCceEEEEEeecCCCCccccCCCCCCCHHHHHHHHHHHHHhc----ccceEEEEeecccccccccc-------------
Q psy6307 182 DEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKR----RYHEVFFMIDTCQASSMYEK------------- 244 (368)
Q Consensus 182 ~~~d~vFvY~s~HGg~~~~~~~~~~~l~~~dL~~~L~~M~~k~----~y~~lv~iidAC~SGSm~~~------------- 244 (368)
...|.+++++.+||..+++.-.|+ .+ .|.+.++.+...+ .=|=.||+++||...-+-..
T Consensus 84 ~~~d~~v~~~lsHG~~g~i~~~D~-~v---~l~~i~~~f~~~~cpsL~gKPKlf~iQACRG~~~~~g~~~~~~~~~~dg~ 159 (259)
T 3sir_A 84 SDSDCILVAILSHGEMGYIYAKDT-QY---KLDNIWSFFTANHCPSLAGKPKLFFIQACQGDRLDGGVTMQRSQTETDGD 159 (259)
T ss_dssp TTEEEEEEEEEECTTCCCCCCTTH-HH---HHHHTTGGGSTTTCGGGSSSCEEEEEEEETTSCEEC--------------
T ss_pred cCCCEEEEEEecCCCCCeEEeCCC-cE---EHHHHHHHhhhccCccccCCCCEEEEecCCCCcccCCcccccCcccccCc
Confidence 457889999999999998765554 23 3333222221110 22456899999996543221
Q ss_pred ------cC-CCcEEEEEecCCCCcccCCCCCCCCcceeeccchHHHHHHHhcccCCChhhHHHHHhhccCccccc
Q psy6307 245 ------FY-SPNILAMASSLVGEDSLSHHVDPAIGVYIIDRYTYYALEFLEDVHLDSAKTMEDFLAVCPKRVCIS 312 (368)
Q Consensus 245 ------l~-~~nV~~itAS~~~EsSys~~~d~~ig~~l~D~FTy~~~~~le~~~~~~~~Tl~~lf~~v~~~~~~S 312 (368)
+. ..++++.=|+.++.-||-. +.-| ..|.-.+++-|+. ......|.+++..|..+|..+
T Consensus 160 ~~~~~~ip~~aD~Li~yST~pG~vs~r~---~~~G----S~fiq~L~~~l~~--~~~~~dl~~ilt~V~~~V~~~ 225 (259)
T 3sir_A 160 SSMSYKIPVHADFLIAYSTVPGFYSWRN---TTRG----SWFMQSLCAELAA--NGKRLDILTLLTFVCQRVAVD 225 (259)
T ss_dssp ---CEECCCCTTEEEEEEEECCSCCCSS---CCCS----CHHHHHHHHHHHH--HTTTSCHHHHHHHHHHHHHTT
T ss_pred ccccccCCCCCCEEEEEECCCCeEeecC---CCCC----cHHHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHH
Confidence 00 1267776676777777732 2223 3344444555544 235678999999998888654
No 10
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=95.04 E-value=0.057 Score=51.05 Aligned_cols=142 Identities=15% Similarity=0.220 Sum_probs=83.5
Q ss_pred cccCHHHHHHHHHHHhhhccccccccCCCceEEEEEeecCCC-------CccccCCCCCCCHHHHHHHHHHHH-Hhcccc
Q psy6307 156 EEVTSQELGDALEQMWQKRRYHELLTDEGSNILIYLTGHGGD-------GFLKFQDSEEVTSQELGDALEQMW-QKRRYH 227 (368)
Q Consensus 156 ~~vt~~~f~~~L~~~~~~~~yk~L~~~~~d~vFvY~s~HGg~-------~~~~~~~~~~l~~~dL~~~L~~M~-~k~~y~ 227 (368)
+.+|.+++.++|+.-.+.. -...|.+++++.+||.. +.+.-.|+..+.-++|.+.|..-. ..-.-|
T Consensus 66 ~dlt~~em~~~l~~~~~~~------h~~~D~~vv~ilSHG~~~~~~~~~g~iy~~D~~~v~l~~i~~~f~~~~CpsL~gK 139 (277)
T 1nw9_B 66 GDLTAKKMVLALLELARQD------HGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGK 139 (277)
T ss_dssp ESCCHHHHHHHHHHHHHSC------CTTCSEEEEEEEEEEECCCCSSSCCEEECTTSCEEEHHHHHHTTCTTTCGGGTTS
T ss_pred cCCCHHHHHHHHHHHHHhh------cccCCeEEEEEeCCCCccccccCCCcEEecCCceeeHHHHHHHhcccCChhHcCC
Confidence 4678888888888654321 13458888999999998 777666666676666655443100 001224
Q ss_pred eEEEEeecccccccccc---------------------------------------cCC-CcEEEEEecCCCCcccCCCC
Q psy6307 228 EVFFMIDTCQASSMYEK---------------------------------------FYS-PNILAMASSLVGEDSLSHHV 267 (368)
Q Consensus 228 ~lv~iidAC~SGSm~~~---------------------------------------l~~-~nV~~itAS~~~EsSys~~~ 267 (368)
=.||+++||...-+-.. +.. .++++.=|+.++.-||-
T Consensus 140 PKlffiQACRG~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~aD~Li~ysT~pG~vs~R--- 216 (277)
T 1nw9_B 140 PKLFFIQACGGEQKDHGFEVASTSPEDESPGSNPEPDATPFQEGLRTFDQLDAISSLPTPSDIFVSYSTFPGFVSWR--- 216 (277)
T ss_dssp CEEEEEEEEC---------------------------CBCCC------------CCCCCSCSEEEEEECCCCBSSTT---
T ss_pred CcEEEEeccCCCcccCCceeccCCcccccccccccccccccccccccccccccccccCCCCCEEEEEcCCCCeEEEc---
Confidence 46899999985432100 111 25666666677766663
Q ss_pred CCCCcceeeccchHHHHHHHhcccCCChhhHHHHHhhccCccccc
Q psy6307 268 DPAIGVYIIDRYTYYALEFLEDVHLDSAKTMEDFLAVCPKRVCIS 312 (368)
Q Consensus 268 d~~ig~~l~D~FTy~~~~~le~~~~~~~~Tl~~lf~~v~~~~~~S 312 (368)
++.-| ..|.-.+++-|++ ..+...|.++|..|+.+|...
T Consensus 217 ~~~~G----S~fiq~L~~~l~~--~~~~~dl~~ilt~V~~~V~~~ 255 (277)
T 1nw9_B 217 DPKSG----SWYVETLDDIFEQ--WAHSEDLQSLLLRVANAVSVK 255 (277)
T ss_dssp CTTSC----BHHHHHHHHHHHH--HTTTSCHHHHHHHHHHHHHTT
T ss_pred CCCCC----cHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHhhc
Confidence 23333 2344444454543 235678999999998887643
No 11
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A
Probab=95.02 E-value=0.04 Score=52.44 Aligned_cols=141 Identities=13% Similarity=0.214 Sum_probs=87.4
Q ss_pred cccCHHHHHHHHHHHhhhccccccccCCCceEEEEEeecCCCCccccCCCCCCCHHHHHHHHHHHH-HhcccceEEEEee
Q psy6307 156 EEVTSQELGDALEQMWQKRRYHELLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMW-QKRRYHEVFFMID 234 (368)
Q Consensus 156 ~~vt~~~f~~~L~~~~~~~~yk~L~~~~~d~vFvY~s~HGg~~~~~~~~~~~l~~~dL~~~L~~M~-~k~~y~~lv~iid 234 (368)
+.+|.+++.++|+.--+. .-...|.+++++.+||..+.+.-.|+ .+.-++|.+.|..-. ..-.-|=.||+++
T Consensus 89 ~dlt~~em~~~l~~f~~~------dh~~~d~~vv~ilSHG~~g~i~g~D~-~v~l~~I~~~f~~~~CpsL~gKPKlffiQ 161 (277)
T 4ehd_A 89 NDLTREEIVELMRDVSKE------DHSKRSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFFRGDRCRSLTGKPKLFIIQ 161 (277)
T ss_dssp ESCCHHHHHHHHHHHHTS------CCTTEEEEEEEEESCEETTEEEETTE-EEEHHHHHHTTSTTTCGGGTTSCEEEEEE
T ss_pred cCCCHHHHHHHHHHHHhh------cccCCCEEEEEEEcCCCCCEEEEeCC-cEeHHHHHHHhhhccCchhcCCccEEEEe
Confidence 457888888888875432 22466889999999999998877776 475555554443100 0012345689999
Q ss_pred cccccccccccC--------------C--CcEEEEEecCCCCcccCCCCCCCCcceeeccchHHHHHHHhcccCCChhhH
Q psy6307 235 TCQASSMYEKFY--------------S--PNILAMASSLVGEDSLSHHVDPAIGVYIIDRYTYYALEFLEDVHLDSAKTM 298 (368)
Q Consensus 235 AC~SGSm~~~l~--------------~--~nV~~itAS~~~EsSys~~~d~~ig~~l~D~FTy~~~~~le~~~~~~~~Tl 298 (368)
||...-+-..+. + .++++.=|+.++.-||-. +.-| ..|.-.+++-|+. ..+...|
T Consensus 162 ACRG~~~~~g~~~~~~~~~~~~~~~ip~~aD~Li~yST~pG~vs~r~---~~~G----S~fIq~L~~~l~~--~~~~~dl 232 (277)
T 4ehd_A 162 ACRGTELDCGIETDSGVDDDMACHKIPVEADFLYACSTAPGYYSWRN---SKDG----SWFIQSLCAMLKQ--YADKLEF 232 (277)
T ss_dssp SCCSSBCBCCCCC----------CCCCTTTTEEEEESSCTTBCCEEE---TTTE----EHHHHHHHHHHHH--HTTTSCH
T ss_pred cCCCCcccCCccccCCccccccccccCCCCCEEEEEECCCCeEeecC---CCCC----cHHHHHHHHHHHH--HCCCCCH
Confidence 998654322211 1 257777777777777632 2222 3344344444443 2356789
Q ss_pred HHHHhhccCccccc
Q psy6307 299 EDFLAVCPKRVCIS 312 (368)
Q Consensus 299 ~~lf~~v~~~~~~S 312 (368)
.+++..|+.+|..+
T Consensus 233 ~~ilt~V~~~V~~~ 246 (277)
T 4ehd_A 233 MHILTRVNRKVATE 246 (277)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998888754
No 12
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=94.96 E-value=0.033 Score=52.75 Aligned_cols=140 Identities=16% Similarity=0.206 Sum_probs=87.1
Q ss_pred cccCHHHHHHHHHHHhhhccccccccCCCceEEEEEeecCCCCccccCCCCCCCHHHHHHHHHHHH-HhcccceEEEEee
Q psy6307 156 EEVTSQELGDALEQMWQKRRYHELLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMW-QKRRYHEVFFMID 234 (368)
Q Consensus 156 ~~vt~~~f~~~L~~~~~~~~yk~L~~~~~d~vFvY~s~HGg~~~~~~~~~~~l~~~dL~~~L~~M~-~k~~y~~lv~iid 234 (368)
+.++.+++.++|+.--+. .-...|.+++++.+||..+++.-.|. .+.-++|.+.|+.-. ..-.-|=.||+++
T Consensus 76 ~dlt~~em~~~l~~~~~~------dh~~~d~~v~~~lsHG~~~~i~~~D~-~v~l~~i~~~f~~~~cpsL~gKPKlffiq 148 (272)
T 1m72_A 76 PNLKSEEINKFIQQTAEM------DHSDADCLLVAVLTHGELGMLYAKDT-HYKPDNLWYYFTADKCPTLAGKPKLFFIQ 148 (272)
T ss_dssp ESCCHHHHHHHHHHHHTS------CCTTEEEEEEEEESCEETTEEECSSS-EECTTHHHHTTSTTTCGGGTTSCEEEEEE
T ss_pred cCcCHHHHHHHHHHHHHh------hcCCCCEEEEEEcCCCCCCEEEecCC-cEEHHHHHHHhccccChhhcCCceEEEEe
Confidence 357888888888866432 12456889999999999998887776 465556655443100 0012244689999
Q ss_pred ccccccccccc----------------CC--CcEEEEEecCCCCcccCCCCCCCCcceeeccchHHHHHHHhcccCCChh
Q psy6307 235 TCQASSMYEKF----------------YS--PNILAMASSLVGEDSLSHHVDPAIGVYIIDRYTYYALEFLEDVHLDSAK 296 (368)
Q Consensus 235 AC~SGSm~~~l----------------~~--~nV~~itAS~~~EsSys~~~d~~ig~~l~D~FTy~~~~~le~~~~~~~~ 296 (368)
||...-+-... .+ .++++.=|+.++.-||-. +.-| ..|.-.+++-|+. ..+..
T Consensus 149 ACRg~~~~~g~~~~~~~~d~~~~~~~~iP~~aD~Li~ysT~pG~vs~r~---~~~G----S~fiq~L~~~l~~--~~~~~ 219 (272)
T 1m72_A 149 ACQGDRLDGGITLSRTETDGSPSTSYRIPVHADFLIAFSTVPGYFSWRN---TTRG----SWFMQALCEELRY--AGTER 219 (272)
T ss_dssp SCSSSBCBCCEEEEC---------CEEECTTCSEEEEESSCTTBCCEEE---TTTE----EHHHHHHHHHHHH--HTTTS
T ss_pred CCCCCcccCCccccccccccccccccccCCCCCEEEEEeCCCCcEeecC---CCCC----CHHHHHHHHHHHh--hCCCC
Confidence 99854431110 11 267777777777777732 2223 3344444454543 23567
Q ss_pred hHHHHHhhccCcccc
Q psy6307 297 TMEDFLAVCPKRVCI 311 (368)
Q Consensus 297 Tl~~lf~~v~~~~~~ 311 (368)
.|.++|..|+.+|..
T Consensus 220 dl~~ilt~V~~~V~~ 234 (272)
T 1m72_A 220 DILTLLTFVCQKVAL 234 (272)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 899999999888754
No 13
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=94.95 E-value=0.045 Score=51.82 Aligned_cols=143 Identities=15% Similarity=0.177 Sum_probs=86.6
Q ss_pred cccCHHHHHHHHHHHhhhccccccccCCCceEEEEEeecCCCCccccCCCCCCCHHHHHHHHHHHH-HhcccceEEEEee
Q psy6307 156 EEVTSQELGDALEQMWQKRRYHELLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMW-QKRRYHEVFFMID 234 (368)
Q Consensus 156 ~~vt~~~f~~~L~~~~~~~~yk~L~~~~~d~vFvY~s~HGg~~~~~~~~~~~l~~~dL~~~L~~M~-~k~~y~~lv~iid 234 (368)
+.+|.+++.++|+.--+. .-...|.+++++.+||..+.+.-.|+..+.-++|.+.|..-. ..-.-|=.||+++
T Consensus 69 ~dlt~~em~~~l~~~~~~------~h~~~d~~v~~ilSHG~~g~i~g~D~~~v~l~~I~~~f~~~~CpsL~gKPKlffiQ 142 (271)
T 3h11_B 69 DDCTVEQIYEILKIYQLM------DHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVFFIQ 142 (271)
T ss_dssp ESCCHHHHHHHHHHHHHS------CCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTTTCGGGTTSCEEEEEE
T ss_pred eCCCHHHHHHHHHHHHHh------cCCCCCEEEEEEEcCCcCCEEEecCCCeecHHHHHHHhhhccChhhcCCccEEEEe
Confidence 468889888888865432 124568889999999999999888877776666655443100 0012344689999
Q ss_pred ccccccccccc-----------------------CC--CcEEEEEecCCCCcccCCCCCCCCcceeeccchHHHHHHHhc
Q psy6307 235 TCQASSMYEKF-----------------------YS--PNILAMASSLVGEDSLSHHVDPAIGVYIIDRYTYYALEFLED 289 (368)
Q Consensus 235 AC~SGSm~~~l-----------------------~~--~nV~~itAS~~~EsSys~~~d~~ig~~l~D~FTy~~~~~le~ 289 (368)
||...-+-..+ .+ .++++.=|+.++.-||-. +.-| ..|.-.+++-|+.
T Consensus 143 ACRG~~~~~gv~~~~~~~~~~~~e~d~~~~~~~~iP~~aD~Li~yST~pG~vs~R~---~~~G----S~fIq~L~~~l~~ 215 (271)
T 3h11_B 143 ACQGDNYQKGIPVETASEEQPYLEMALSSPQTRYIPDEADFLLGMATVNNCVSYRN---PAEG----TWYIQSLCQSLRE 215 (271)
T ss_dssp SCCSSBCC----------------------CCCCSCSSSSEEEEESSCTTBCCEEE---TTTE----EHHHHHHHHHHHH
T ss_pred ccCCCcccCCceeccCCccccccccccccccccccCCCCceEEEEECCCCceeecC---CCCC----cHHHHHHHHHHHH
Confidence 99855431110 01 256666666666666622 2223 2333334444433
Q ss_pred ccCCC-hhhHHHHHhhccCcccccC
Q psy6307 290 VHLDS-AKTMEDFLAVCPKRVCIST 313 (368)
Q Consensus 290 ~~~~~-~~Tl~~lf~~v~~~~~~S~ 313 (368)
. .+ ...|.++|..|+.+|...+
T Consensus 216 ~--~~~~~dl~~ilt~Vn~~V~~~~ 238 (271)
T 3h11_B 216 R--CPRGDDILTILTEVNYEVSNKD 238 (271)
T ss_dssp H--GGGTCCHHHHHHHHHHHHHTC-
T ss_pred h--CCCCCCHHHHHHHHHHHHhhcc
Confidence 1 23 5689999999999887543
No 14
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda}
Probab=94.78 E-value=0.067 Score=51.78 Aligned_cols=140 Identities=16% Similarity=0.167 Sum_probs=86.6
Q ss_pred cccCHHHHHHHHHHHhhhccccccccCCCceEEEEEeecCCCCccccCCCCCCCHHHHHHHHHHHH-HhcccceEEEEee
Q psy6307 156 EEVTSQELGDALEQMWQKRRYHELLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMW-QKRRYHEVFFMID 234 (368)
Q Consensus 156 ~~vt~~~f~~~L~~~~~~~~yk~L~~~~~d~vFvY~s~HGg~~~~~~~~~~~l~~~dL~~~L~~M~-~k~~y~~lv~iid 234 (368)
+.++.+++.++|+.-.+. .-...|.+++++.+||..+++.-.|. .+.-++|.+.|..-. ..-.-|=.||+++
T Consensus 104 ~dlt~~em~~~l~~f~~~------dh~~~D~~vv~ilSHG~~g~i~g~D~-~v~l~~I~~~f~~~~CpsL~gKPKlffiQ 176 (310)
T 2nn3_C 104 PNLKSEEINKFIQQTAEM------DHSDADCLLVAVLTAGELGMLYAKDT-HYKPDNLWYYFTADKCPTLAGKPKLFFIQ 176 (310)
T ss_dssp ESCCHHHHHHHHHHHHSS------CGGGBSCEEEEEEEEEETTEEECSSC-EECTHHHHGGGSTTTCGGGTTSCEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHh------ccCCCCEEEEEEeCCCCCCEEEecCC-cEEHHHHHHHhccccChhhcCCceEEEEe
Confidence 357788888888765432 12356889999999999998887776 465566655443100 0012244689999
Q ss_pred ccccccccccc---------------CCC---cEEEEEecCCCCcccCCCCCCCCcceeeccchHHHHHHHhcccCCChh
Q psy6307 235 TCQASSMYEKF---------------YSP---NILAMASSLVGEDSLSHHVDPAIGVYIIDRYTYYALEFLEDVHLDSAK 296 (368)
Q Consensus 235 AC~SGSm~~~l---------------~~~---nV~~itAS~~~EsSys~~~d~~ig~~l~D~FTy~~~~~le~~~~~~~~ 296 (368)
||...-+-... ..| ++++.=|+.++.-||-. + --+..|.-.+++-|+. ..+..
T Consensus 177 ACRG~~~d~g~~~~~~~~d~~~~~~~~iP~~aD~LiayST~pG~vS~R~---~----~~GSwFIqaL~~~l~~--~~~~~ 247 (310)
T 2nn3_C 177 ACQGDRLDGGITLSRTETDGSPSTSYRIPVHADFLIAFSTVPGYFSWRN---T----TRGSWFMQALCEELRY--AGTER 247 (310)
T ss_dssp EECCCCCCCCC-------------CCCCCCSTTEEEEECCCCCEEESSS---S----EEEEHHHHHHHHHHHT--TTTTS
T ss_pred cccCCccccCccccccccccccccccccCCCCCEEEEEeCCCCceeecC---C----CCCCHHHHHHHHHHHh--hCCCC
Confidence 99864431110 112 67777777777777632 2 1233444444454543 24567
Q ss_pred hHHHHHhhccCcccc
Q psy6307 297 TMEDFLAVCPKRVCI 311 (368)
Q Consensus 297 Tl~~lf~~v~~~~~~ 311 (368)
.|.++|..|+.+|..
T Consensus 248 dl~~ilt~Vn~~V~~ 262 (310)
T 2nn3_C 248 DILTLLTFVCQKVAL 262 (310)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 899999999888864
No 15
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=94.07 E-value=0.13 Score=45.88 Aligned_cols=79 Identities=11% Similarity=0.175 Sum_probs=50.1
Q ss_pred ccCHHHHHHHHHHHhhhccccccccCCCceEEEEEeecCCCCccccCCC-----CCCCHHHHHHHHHHHH-HhcccceEE
Q psy6307 157 EVTSQELGDALEQMWQKRRYHELLTDEGSNILIYLTGHGGDGFLKFQDS-----EEVTSQELGDALEQMW-QKRRYHEVF 230 (368)
Q Consensus 157 ~vt~~~f~~~L~~~~~~~~yk~L~~~~~d~vFvY~s~HGg~~~~~~~~~-----~~l~~~dL~~~L~~M~-~k~~y~~lv 230 (368)
.+|.+++.++|+.-.+. ..-...|.+++|+.+||..+.+.-.+. +.+.-++|...|..-. ..-.-|-.|
T Consensus 86 dlt~~em~~~l~~f~~~-----~d~~~~d~~v~~~lsHG~~g~i~g~D~~~~~~~~v~l~~I~~~f~~~~CpsL~gKPKl 160 (178)
T 2h54_A 86 NLTASDMTTELEAFAHR-----PEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKDKPKV 160 (178)
T ss_dssp SCCHHHHHHHHHHHHTC-----GGGGGCSCEEEEEESCBCSSCEECTTCCSSSCCEECHHHHHHHHSTTTCGGGTTSCEE
T ss_pred CCCHHHHHHHHHHHHhh-----hhcCCCCEEEEEEecCCCCCeEEeecCCcccCcEEEHHHHHHHHhhcCChhhcCCceE
Confidence 47788888888754321 112345778899999999988776665 3576666665543200 001235668
Q ss_pred EEeecccccc
Q psy6307 231 FMIDTCQASS 240 (368)
Q Consensus 231 ~iidAC~SGS 240 (368)
|+++||..+-
T Consensus 161 ffiqACRg~~ 170 (178)
T 2h54_A 161 IIIQACRGDS 170 (178)
T ss_dssp EEEESCSSSB
T ss_pred EEEECCCCCC
Confidence 9999999754
No 16
>2fp3_A Caspase NC; apoptosis, initiator caspase activation, dimerization, active site conformation, hydrolysis/apoptosis complex; 2.50A {Drosophila melanogaster}
Probab=93.95 E-value=0.095 Score=50.73 Aligned_cols=144 Identities=14% Similarity=0.121 Sum_probs=80.4
Q ss_pred cccCHHHHHHHHHHHhhhccccccccCCCceEEEEEeecCCC----CccccCCCCCCCHHHHHHHHHHHHH-hcccceEE
Q psy6307 156 EEVTSQELGDALEQMWQKRRYHELLTDEGSNILIYLTGHGGD----GFLKFQDSEEVTSQELGDALEQMWQ-KRRYHEVF 230 (368)
Q Consensus 156 ~~vt~~~f~~~L~~~~~~~~yk~L~~~~~d~vFvY~s~HGg~----~~~~~~~~~~l~~~dL~~~L~~M~~-k~~y~~lv 230 (368)
+.+|.+++.++|+.-.+. .-+...|.+++++.+||.. +++.-.|+..+.-++|.+.|..-.- .-.=|=.|
T Consensus 104 ~dlt~~em~~~l~~f~~~-----~h~~~~D~~vv~ilSHG~~~~g~g~i~g~D~~~v~l~~I~~~f~~~~CpsL~gKPKl 178 (316)
T 2fp3_A 104 GNVNQDQFFKLLTMVTSS-----SYVQNTECFVMVLMTHGNSVEGKEKVEFRDGSVVDMQKIKDHFQTAKCPYLVNKPKV 178 (316)
T ss_dssp CSCCHHHHHHHHHHHHTS-----HHHHTCSCEEEEEESCEECCTTCCEEECTTSCEEEHHHHHHTTSTTTCGGGTTSCEE
T ss_pred cCCCHHHHHHHHHHHHHH-----hhcCCCCEEEEEEccCCCccCCCCEEEeecCcEEeHHHHHHHhccccChhhcCCceE
Confidence 356677666666654321 1122567889999999999 8988888876766666554431000 01234468
Q ss_pred EEeecccccccccc----------------------------------cC-CCcEEEEEecCCCCcccCCCCCCCCccee
Q psy6307 231 FMIDTCQASSMYEK----------------------------------FY-SPNILAMASSLVGEDSLSHHVDPAIGVYI 275 (368)
Q Consensus 231 ~iidAC~SGSm~~~----------------------------------l~-~~nV~~itAS~~~EsSys~~~d~~ig~~l 275 (368)
|+++||...-+-.. +. ..++++.=|+.++.-||-. +.-|
T Consensus 179 ffiQACRG~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~iP~~aD~Li~yST~pG~vS~R~---~~~G--- 252 (316)
T 2fp3_A 179 LMFPFARGDEYDLGHPKNQGNLMEPVYTAQEEKWPDTQTEGIPSPSTNVPSLADTLVCYANTPGYVTHRD---LDTG--- 252 (316)
T ss_dssp EEESCC---------------------------------------CCCCCCCCSEEEEECCCSCCCBTTT---BCHH---
T ss_pred EEEecCCCCcccCCceeccCcccccccccccccccccccccccccccccCCCCCEEEEEeCCCCceeccC---CCCC---
Confidence 99999986332111 00 0256666666666666631 2222
Q ss_pred eccchHHHHHHHhcccCCChhhHHHHHhhccCcccccC
Q psy6307 276 IDRYTYYALEFLEDVHLDSAKTMEDFLAVCPKRVCIST 313 (368)
Q Consensus 276 ~D~FTy~~~~~le~~~~~~~~Tl~~lf~~v~~~~~~S~ 313 (368)
..|.-.+++-|++ ..+...|.++|..|+.+|...+
T Consensus 253 -SwFIq~L~~~l~~--~~~~~dl~~ilt~Vn~~V~~~~ 287 (316)
T 2fp3_A 253 -SWYIQKFCQVMAD--HAHDTDLEDILKKTSEAVGNKR 287 (316)
T ss_dssp -HHHHHHHHHHHHH--HTTTSCHHHHHHHHHHHHHSSS
T ss_pred -CHHHHHHHHHHHH--HCCCCCHHHHHHHHHHHHHHhh
Confidence 2333333444433 2356789999999888886554
No 17
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=89.24 E-value=0.48 Score=41.73 Aligned_cols=104 Identities=17% Similarity=0.238 Sum_probs=67.3
Q ss_pred CCCCCCHHHHHHHHcCCCCCCCCCCcccccCCCccEEEEecCCCCCCccccCCCcccCHHHHHHHHHHHhhhcccccccc
Q psy6307 102 RGYEVTVENFIRLLTGRLPPSTPRSKQLLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHELLT 181 (368)
Q Consensus 102 ~g~~vt~enfl~vL~G~~~~~~p~~k~l~s~~~d~vfiy~tgHG~~g~i~~~~~~~vt~~~f~~~L~~~~~~~~yk~L~~ 181 (368)
.|.++.++++.++++.-- =.|.++ +.+|.++..++|+.--+.. .-
T Consensus 54 ~Gt~~D~~~L~~~f~~Lg---------------F~V~~~---------------~dlt~~em~~~l~~~~~~~-----dh 98 (167)
T 1pyo_A 54 SGGDVDHSTLVTLFKLLG---------------YDVHVL---------------CDQTAQEMQEKLQNFAQLP-----AH 98 (167)
T ss_dssp TTHHHHHHHHHHHHHHTT---------------EEEEEE---------------ESCCHHHHHHHHHHHHTCG-----GG
T ss_pred CCcHHHHHHHHHHHHHCC---------------CEEEEe---------------eCCCHHHHHHHHHHhhhhh-----hc
Confidence 467777888888776421 123333 4578888888887654311 11
Q ss_pred CCCceEEEEEeecCCCCccccCCCCCCCHHHHHHHHHHHH-HhcccceEEEEeecccccc
Q psy6307 182 DEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMW-QKRRYHEVFFMIDTCQASS 240 (368)
Q Consensus 182 ~~~d~vFvY~s~HGg~~~~~~~~~~~l~~~dL~~~L~~M~-~k~~y~~lv~iidAC~SGS 240 (368)
...|-+++++.+||..+.+.-.++..+.-++|...|..-. ..-.=|=.||++.||....
T Consensus 99 ~~~dc~vv~ilSHG~~g~i~g~D~~~v~l~~i~~~F~~~~CpsL~gKPKlffiQACRG~~ 158 (167)
T 1pyo_A 99 RVTDSCIVALLSHGVEGAIYGVDGKLLQLQEVFQLFDNANCPSLQNKPKMFFIQACRGDE 158 (167)
T ss_dssp GTSSEEEEEEESCEETTEEECTTSCEEEHHHHHHHTSTTTCGGGTTSCEEEEEESCSSSB
T ss_pred cCCCEEEEEeCCCCCCCeEEEeCCCEEcHHHHHHHhcccCChhHcCCCeEEEEECCCCCC
Confidence 2467889999999999999988887786666666553100 0012344589999998644
No 18
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A*
Probab=89.05 E-value=1.8 Score=43.20 Aligned_cols=113 Identities=17% Similarity=0.295 Sum_probs=68.1
Q ss_pred CCcEEEEEeCCCCCC--Ccc-hhhhHHHHHHHHHhCCCCCCCEEEEecCCCCCCCCCCCCCeeeeCCCCCCCccCCCccc
Q psy6307 23 SNNWAVLVDTSRFWF--NYR-HVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDVEV 99 (368)
Q Consensus 23 ~~~wAVlvagS~~w~--NYR-Hqadv~~~Y~~L~~~Gi~d~~Ii~m~~DDia~n~~Np~pG~i~n~~~~~~nvy~~~v~i 99 (368)
.+++|+||+-+++-. +-+ =..|+-.+.+.|++.|++ +.+. .
T Consensus 4 ~~r~ALIIGn~~Y~~~~~L~ga~~DA~~L~~~L~~lGF~---V~~l------------------~--------------- 47 (390)
T 3uoa_B 4 KDKVALLIGNMNYREHPKLKAPLVDVYELTNLLRQLDFK---VVSL------------------L--------------- 47 (390)
T ss_dssp SCEEEEEEECCCCSSSCCCSTHHHHHHHHHHHHHHTTCE---EEEE------------------E---------------
T ss_pred CCCEEEEEEecCCCCcccCCChHHHHHHHHHHHHHcCCe---EEEe------------------e---------------
Confidence 578999999876532 111 135999999999999994 2221 1
Q ss_pred cCCCCCCCHHHHHHHHcCCCCCCCCCCcccccCCCccEEEEecCCCCC----CccccCCCc-------ccCHHHHHHHHH
Q psy6307 100 DYRGYEVTVENFIRLLTGRLPPSTPRSKQLLTDEGSNILIYLTGHGGD----GFLKFQDSE-------EVTSQELGDALE 168 (368)
Q Consensus 100 DY~g~~vt~enfl~vL~G~~~~~~p~~k~l~s~~~d~vfiy~tgHG~~----g~i~~~~~~-------~vt~~~f~~~L~ 168 (368)
++|.+++.+.|..-. ++. .+.|.+++||+|||.. +++.-.|++ .++.+.+++.|+
T Consensus 48 -----DlT~~eI~~aL~~f~-------~~~--~~~D~~l~yfsGHG~~~~g~~yL~p~Da~~~~~~~~~isl~~Ll~~l~ 113 (390)
T 3uoa_B 48 -----DLTEYEMRNAVDEFL-------LLL--DKGVYGLLYYAGHGYENFGNSFMVPVDAPNPYRSENCLCVQNILKLMQ 113 (390)
T ss_dssp -----SCCHHHHHHHHHHHH-------HTC--CTTCEEEEEEESCEEEETTEEEECCTTCCSSCCGGGSEEHHHHHHHHH
T ss_pred -----cCCHHHHHHHHHHHH-------hhC--CCCCEEEEEEecCccccCCcceEEecCCCccccccceeeHHHHHHHHH
Confidence 135566666664211 111 3568999999999954 555444443 356666666665
Q ss_pred HHhhhccccccccCCCceEEEEEeecCC
Q psy6307 169 QMWQKRRYHELLTDEGSNILIYLTGHGG 196 (368)
Q Consensus 169 ~~~~~~~yk~L~~~~~d~vFvY~s~HGg 196 (368)
.. .....||+.=+|+|+
T Consensus 114 ~~-----------~~K~kL~ILDACrg~ 130 (390)
T 3uoa_B 114 EK-----------ETGLNVFLLDMCRKR 130 (390)
T ss_dssp HT-----------TCSEEEEEEESCCCC
T ss_pred hc-----------CCCceEEEEECCCCC
Confidence 42 122345555566664
No 19
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=88.58 E-value=1.5 Score=41.49 Aligned_cols=141 Identities=9% Similarity=-0.012 Sum_probs=81.5
Q ss_pred cccCHHHHHHHHHHHhhhccccccccCCCceEEEEEeecCCCCccccCCCC--CCCHHHHHHHHHHHH-HhcccceEEEE
Q psy6307 156 EEVTSQELGDALEQMWQKRRYHELLTDEGSNILIYLTGHGGDGFLKFQDSE--EVTSQELGDALEQMW-QKRRYHEVFFM 232 (368)
Q Consensus 156 ~~vt~~~f~~~L~~~~~~~~yk~L~~~~~d~vFvY~s~HGg~~~~~~~~~~--~l~~~dL~~~L~~M~-~k~~y~~lv~i 232 (368)
+.+|.+++.++|+.--+. -.-...|-+++++.+||..+.+.-.|+. .+.-++|.+.|..=. ..-.-|=.||+
T Consensus 74 ~dlt~~em~~~l~~~~~~-----~dh~~~d~~v~~ilSHG~~g~i~g~D~~~~~v~l~~i~~~f~~~~CpsL~gKPKlff 148 (272)
T 3h11_A 74 LHLSMHGISQILGQFACM-----PEHRDYDSFVCVLVSRGGSQSVYGVDQTHSGLPLHHIRRMFMGDSCPYLAGKPKMFF 148 (272)
T ss_dssp ESCBHHHHHHHHHHHHTC-----GGGGGCSEEEEEEEEEEETTEECBTSCCSSCEEHHHHHHHHSTTTCGGGTTSCEEEE
T ss_pred eCCCHHHHHHHHHHHHhc-----cccCCCCEEEEEEEcCCCCCeEEEEcCCcceEeHHHHHHHhccccChhhcCCCcEEE
Confidence 467888888888865331 1123678899999999999998887775 476666665553100 00023446899
Q ss_pred eecccccc-ccc-c------------------------cC-CCcEEEEEecCCCCcccCCCCCCCCcceeeccchHHHHH
Q psy6307 233 IDTCQASS-MYE-K------------------------FY-SPNILAMASSLVGEDSLSHHVDPAIGVYIIDRYTYYALE 285 (368)
Q Consensus 233 idAC~SGS-m~~-~------------------------l~-~~nV~~itAS~~~EsSys~~~d~~ig~~l~D~FTy~~~~ 285 (368)
+.||.... -++ . +. ..++++.-|+.++--||- ++.-|. .|.-.+++
T Consensus 149 iQACRG~~~~~~~g~~~~~D~~~~~~~~~~~~~~~~~~iP~~aDfL~~yST~pg~~s~R---~~~~GS----wfIq~Lc~ 221 (272)
T 3h11_A 149 IQNYVVSEGQLENSSLLEVDGPAMKNVEFKAQKRGLCTVHREADFFWSLCTADMSLLEQ---SHSSPS----LYLQCLSQ 221 (272)
T ss_dssp EEEEEC--------------------------------CCTTCSEEEEEEEEEGGGTSS---TTCCCC----HHHHHHHH
T ss_pred EECCCCCCcccCCCcceeccCcccccccccccccccccCCCCCCEEEEEeccCCeEEEE---eCCCCC----HHHHHHHH
Confidence 99998531 110 0 00 014555555445444442 233342 23223344
Q ss_pred HHhcccCCChhhHHHHHhhccCcccc
Q psy6307 286 FLEDVHLDSAKTMEDFLAVCPKRVCI 311 (368)
Q Consensus 286 ~le~~~~~~~~Tl~~lf~~v~~~~~~ 311 (368)
-|+. .....|.+++..|..++..
T Consensus 222 ~l~~---~~~~dl~~ilt~Vn~~V~~ 244 (272)
T 3h11_A 222 KLRQ---ERKRPLLDLHIELNGYMYD 244 (272)
T ss_dssp HHHH---CTTSCHHHHHHHHHHHHHH
T ss_pred HHHh---cCCCCHHHHHHHHHHHHHH
Confidence 4444 2366899999999888743
No 20
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=88.22 E-value=0.43 Score=41.92 Aligned_cols=103 Identities=15% Similarity=0.186 Sum_probs=68.0
Q ss_pred CCCCCCHHHHHHHHcCCCCCCCCCCcccccCCCccEEEEecCCCCCCccccCCCcccCHHHHHHHHHHHhhhcccccccc
Q psy6307 102 RGYEVTVENFIRLLTGRLPPSTPRSKQLLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHELLT 181 (368)
Q Consensus 102 ~g~~vt~enfl~vL~G~~~~~~p~~k~l~s~~~d~vfiy~tgHG~~g~i~~~~~~~vt~~~f~~~L~~~~~~~~yk~L~~ 181 (368)
.|.++.++++.+++++-- =.|.+| +.+|.++..++|+.-.+.. -
T Consensus 51 ~Gt~~D~~~L~~~f~~Lg---------------F~V~~~---------------~dlt~~em~~~l~~~~~~d------h 94 (164)
T 1qtn_A 51 NGTHLDAGALTTTFEELH---------------FEIKPH---------------DDCTVEQIYEILKIYQLMD------H 94 (164)
T ss_dssp TTHHHHHHHHHHHHHHTT---------------CEEEEE---------------ESCCHHHHHHHHHHHHHSC------C
T ss_pred CCcHHHHHHHHHHHHHCC---------------CEEEEe---------------cCCCHHHHHHHHHHHHHhh------c
Confidence 467788888888886421 124444 4678888888888663221 2
Q ss_pred CCCceEEEEEeecCCCCccccCCCCCCCHHHHHHHHHHHHH-hcccceEEEEeecccccc
Q psy6307 182 DEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQ-KRRYHEVFFMIDTCQASS 240 (368)
Q Consensus 182 ~~~d~vFvY~s~HGg~~~~~~~~~~~l~~~dL~~~L~~M~~-k~~y~~lv~iidAC~SGS 240 (368)
...|-+++++.+||..+.+.-.++..+.-++|...|..-.- .-.=|=.||++.||...-
T Consensus 95 ~~~dc~vv~ilSHG~~g~i~g~D~~~v~i~~i~~~F~~~~CpsL~gKPKlFfiQACRG~~ 154 (164)
T 1qtn_A 95 SNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVFFIQACQGDN 154 (164)
T ss_dssp TTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTTTCGGGTTSCEEEEEESCSSSB
T ss_pred cCCCEEEEEeCCCCCCCEEEeeCCCEeeHHHHHHHhccccChhhcCCCeEEEEECCCCCC
Confidence 35688999999999999998888877766666655432000 012234688999998643
No 21
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=82.21 E-value=0.73 Score=39.64 Aligned_cols=102 Identities=14% Similarity=0.259 Sum_probs=66.1
Q ss_pred CCCCCCHHHHHHHHcCCCCCCCCCCcccccCCCccEEEEecCCCCCCccccCCCcccCHHHHHHHHHHHhhhcccccccc
Q psy6307 102 RGYEVTVENFIRLLTGRLPPSTPRSKQLLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHELLT 181 (368)
Q Consensus 102 ~g~~vt~enfl~vL~G~~~~~~p~~k~l~s~~~d~vfiy~tgHG~~g~i~~~~~~~vt~~~f~~~L~~~~~~~~yk~L~~ 181 (368)
.|.++.++++.++++.-- =.|.++ +.+|.++..++|+.-.+.. -
T Consensus 37 ~Gt~~D~~~L~~~f~~Lg---------------F~V~~~---------------~dlt~~em~~~l~~~~~~d------h 80 (146)
T 2dko_A 37 SGTDVDAANLRETFRNLK---------------YEVRNK---------------NDLTREEIVELMRDVSKED------H 80 (146)
T ss_dssp TTHHHHHHHHHHHHHHTT---------------CEEEEE---------------ESCCHHHHHHHHHHHHHSC------C
T ss_pred CCCHHHHHHHHHHHHHCC---------------CEEEEe---------------eCCCHHHHHHHHHHHHHhh------c
Confidence 477778888888886421 124444 3578888888887664321 2
Q ss_pred CCCceEEEEEeecCCCCccccCCCCCCCHHHHHHHHHHHH-HhcccceEEEEeecccccc
Q psy6307 182 DEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMW-QKRRYHEVFFMIDTCQASS 240 (368)
Q Consensus 182 ~~~d~vFvY~s~HGg~~~~~~~~~~~l~~~dL~~~L~~M~-~k~~y~~lv~iidAC~SGS 240 (368)
...|-+++++.+||..+.+.-.|+ .+.-++|...|..-. ..-.=|=.||++.||....
T Consensus 81 ~~~dc~vv~ilSHG~~g~i~g~D~-~~~l~~i~~~F~~~~CpsL~gKPKlffiQACRG~~ 139 (146)
T 2dko_A 81 SKRSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTE 139 (146)
T ss_dssp TTEEEEEEEEESCEETTEEEETTE-EEEHHHHHHTTSTTTCGGGTTSCEEEEEESCCSSB
T ss_pred CCCCeEEEEeccCCCCCEEEEeCC-cEeHHHHHHHhccccChhhcCCCeEEEEECCCCCC
Confidence 456889999999999999888787 675566555442100 0012244588999998643
No 22
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}
Probab=78.81 E-value=1.6 Score=40.98 Aligned_cols=34 Identities=24% Similarity=0.437 Sum_probs=26.1
Q ss_pred ccCHHHHHHHHHHHhhhccccccccCCCceEEEEEeecCCC
Q psy6307 157 EVTSQELGDALEQMWQKRRYHELLTDEGSNILIYLTGHGGD 197 (368)
Q Consensus 157 ~vt~~~f~~~L~~~~~~~~yk~L~~~~~d~vFvY~s~HGg~ 197 (368)
..|.+++.++|+..-+ ...++|.+|+||||||..
T Consensus 54 ~~t~~~i~~al~~l~~-------~~~~~D~~~~yfSGHG~~ 87 (285)
T 3bij_A 54 AATRAKVIDAIGKAAK-------ALGKGDIFMLSYSGHGGQ 87 (285)
T ss_dssp GCCHHHHHHHHHHHHH-------HCCTTCEEEEEEESCEEE
T ss_pred ccCHHHHHHHHHHHHH-------hCCCCCEEEEEEcCCccc
Confidence 3577888888876543 245789999999999964
No 23
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=78.09 E-value=1.8 Score=38.56 Aligned_cols=102 Identities=14% Similarity=0.210 Sum_probs=64.6
Q ss_pred CCCCCCHHHHHHHHcCCCCCCCCCCcccccCCCccEEEEecCCCCCCccccCCCcccCHHHHHHHHHHHhhhcccccccc
Q psy6307 102 RGYEVTVENFIRLLTGRLPPSTPRSKQLLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHELLT 181 (368)
Q Consensus 102 ~g~~vt~enfl~vL~G~~~~~~p~~k~l~s~~~d~vfiy~tgHG~~g~i~~~~~~~vt~~~f~~~L~~~~~~~~yk~L~~ 181 (368)
.|.++..+++.++++.-- =.|.+| +.+|.+++.++|+.-.+. .-
T Consensus 65 ~Gt~~D~~~L~~~F~~LG---------------F~V~~~---------------~dlt~~em~~~l~~~~~~------dh 108 (179)
T 3p45_A 65 RGTCADRDNLTRRFSDLG---------------FEVKCF---------------NDLKAEELLLKIHEVSTV------SH 108 (179)
T ss_dssp TTHHHHHHHHHHHHHHTT---------------CEEEEE---------------ESCCHHHHHHHHHHHHTS------CC
T ss_pred CCCHHHHHHHHHHHHHCC---------------CEEEEE---------------eCCCHHHHHHHHHHHhhh------hc
Confidence 467777888887776421 124444 468889888888874221 22
Q ss_pred CCCceEEEEEeecCCCCccccCCCCCCCHHHHHHHHHHHH-HhcccceEEEEeecccccc
Q psy6307 182 DEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMW-QKRRYHEVFFMIDTCQASS 240 (368)
Q Consensus 182 ~~~d~vFvY~s~HGg~~~~~~~~~~~l~~~dL~~~L~~M~-~k~~y~~lv~iidAC~SGS 240 (368)
...|-+++.+.+||..+.+.-.|+. +.-++|.+.|..-. ..-.=|=.||++.||....
T Consensus 109 ~~~dc~vvvilSHG~~g~I~g~D~~-v~l~~I~~~F~~~~CpsL~gKPKlFfIQACRG~~ 167 (179)
T 3p45_A 109 ADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQ 167 (179)
T ss_dssp TTBSCEEEEEESCEETTEEECSSSE-EEHHHHHGGGSGGGCGGGTTSCEEEEEECC----
T ss_pred CCCCEEEEEEeccCCCCEEEEECCE-EEHHHHHHhcccccChhhCCCCcEEEEECCCCCC
Confidence 3678999999999999998888876 76666655443100 0012245688999998643
No 24
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A
Probab=75.94 E-value=4.8 Score=39.72 Aligned_cols=35 Identities=14% Similarity=0.298 Sum_probs=27.3
Q ss_pred cccCHHHHHHHHHHHhhhccccccccCCCceEEEEEeecCCC
Q psy6307 156 EEVTSQELGDALEQMWQKRRYHELLTDEGSNILIYLTGHGGD 197 (368)
Q Consensus 156 ~~vt~~~f~~~L~~~~~~~~yk~L~~~~~d~vFvY~s~HGg~ 197 (368)
...|.+++.++|+..-+ ...++|.+|+||||||..
T Consensus 147 ~~pTr~nI~~aL~~L~~-------~a~pgD~l~fyFSGHG~q 181 (367)
T 4af8_A 147 DQPTRDNIVRYMAWLVK-------DAKPGDVLFFHYSGHGTQ 181 (367)
T ss_dssp BCCCHHHHHHHHHHHHH-------TCCTTCEEEEEEESCEEE
T ss_pred cCCCHHHHHHHHHHHHH-------hCCCCCEEEEEEcCCcCc
Confidence 35678888888875543 256889999999999974
No 25
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=75.52 E-value=2 Score=42.22 Aligned_cols=82 Identities=13% Similarity=0.183 Sum_probs=47.6
Q ss_pred ccCHHHHHHHHHHHhhhccccccccCCCceEEEEEeecCCCCccccCCCCCCCHHHHHHHHHHHHHhcccceEEEEeecc
Q psy6307 157 EVTSQELGDALEQMWQKRRYHELLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEVFFMIDTC 236 (368)
Q Consensus 157 ~vt~~~f~~~L~~~~~~~~yk~L~~~~~d~vFvY~s~HGg~~~~~~~~~~~l~~~dL~~~L~~M~~k~~y~~lv~iidAC 236 (368)
..|.+++.++|+..-+ ...++|.+||||||||..--- .++ .+...|.+.++-.|..
T Consensus 108 ~pTr~nI~~aL~~L~~-------~a~pgD~llfYFSGHG~q~~d--~~g---------------dE~dG~De~lvP~D~~ 163 (350)
T 4f6o_A 108 VPTRANMIRAMQWLVK-------DAQPNDSLFLHYSGHGGQTED--LDG---------------DEEDGMDDVIYPVDFE 163 (350)
T ss_dssp SCCHHHHHHHHHHHHT-------TCCTTCEEEEEEESCEEEC----------------------------CEEECCTTHH
T ss_pred CCCHHHHHHHHHHHHH-------hCCCCCEEEEEEcCCceeccC--CCC---------------CcccCCceEEEeccCC
Confidence 3578889999875432 246889999999999975320 000 0123456666666666
Q ss_pred ccccccc-----cc---CC--CcEEEEEecCCCCcc
Q psy6307 237 QASSMYE-----KF---YS--PNILAMASSLVGEDS 262 (368)
Q Consensus 237 ~SGSm~~-----~l---~~--~nV~~itAS~~~EsS 262 (368)
..|.+.+ .+ .+ .+|.+|.-+|...+.
T Consensus 164 ~~g~I~ddeL~~~L~~~l~~g~~vt~IlD~ChSGt~ 199 (350)
T 4f6o_A 164 TQGPIIDDEMHDIMVKPLQQGVRLTALFDSCHSGTV 199 (350)
T ss_dssp HHCCEEHHHHHHHHTTTCCTTCEEEEEECSSSCTTT
T ss_pred cCCcccHHHHHHHHHhhcCCCCeEEEEEccCCCCcc
Confidence 5543321 11 12 378888887766554
No 26
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A
Probab=74.12 E-value=1.9 Score=38.17 Aligned_cols=102 Identities=13% Similarity=0.265 Sum_probs=63.2
Q ss_pred CCCCCCHHHHHHHHcCCCCCCCCCCcccccCCCccEEEEecCCCCCCccccCCCcccCHHHHHHHHHHHhhhcccccccc
Q psy6307 102 RGYEVTVENFIRLLTGRLPPSTPRSKQLLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHELLT 181 (368)
Q Consensus 102 ~g~~vt~enfl~vL~G~~~~~~p~~k~l~s~~~d~vfiy~tgHG~~g~i~~~~~~~vt~~~f~~~L~~~~~~~~yk~L~~ 181 (368)
.|.++..+++..++++-- =.|.+| +.+|.++..++|+.-.+. .-
T Consensus 65 ~Gt~~D~~~L~~~F~~Lg---------------F~V~v~---------------~dlt~~em~~~l~~~s~~------dh 108 (173)
T 2ql9_A 65 NGTDKDAEALFKCFRSLG---------------FDVIVY---------------NDCSCAKMQDLLKKASEE------DH 108 (173)
T ss_dssp TTHHHHHHHHHHHHHHHT---------------EEEEEE---------------ESCCHHHHHHHHHHHHTS------CC
T ss_pred CCcHHHHHHHHHHHHHCC---------------CEEEEE---------------eCCCHHHHHHHHHHHHHh------hc
Confidence 367777888887775311 124444 357888888888764322 12
Q ss_pred CCCceEEEEEeecCCCCccccCCCCCCCHHHHHHHHHHHH-HhcccceEEEEeecccccc
Q psy6307 182 DEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMW-QKRRYHEVFFMIDTCQASS 240 (368)
Q Consensus 182 ~~~d~vFvY~s~HGg~~~~~~~~~~~l~~~dL~~~L~~M~-~k~~y~~lv~iidAC~SGS 240 (368)
...|-+++++.+||..+.+.-.|+. +.-++|...|..-. ..-.=|=.||++.||...-
T Consensus 109 ~~~dc~vvvilSHG~~g~I~g~D~~-~~i~~I~~~F~~~~CpsL~gKPKlFfIQACRG~~ 167 (173)
T 2ql9_A 109 TNAACFACILLSHGEENVIYGKDGV-TPIKDLTAHFRGDRCKTLLEKPKLFFIQACRGTE 167 (173)
T ss_dssp TTEEEEEEEEESCEETTEEEETTEE-EEHHHHHGGGSTTTCGGGTTSCEEEEEESCCSSB
T ss_pred cCCCeEEEeecCCCCCCEEEEcCCc-EEHHHHHHHcCcccChhHcCCCeEEEEECCCCCC
Confidence 3568899999999999988887763 65555544332100 0002344688899998543
No 27
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=42.74 E-value=69 Score=30.21 Aligned_cols=79 Identities=10% Similarity=0.237 Sum_probs=49.2
Q ss_pred cEEEEecCCCCCCccccCCCcccCHHHHHHHHHHHhhhccccccccCCCceEEEEEe-ecCCCCccccCCCCCCCHHHHH
Q psy6307 136 NILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHELLTDEGSNILIYLT-GHGGDGFLKFQDSEEVTSQELG 214 (368)
Q Consensus 136 ~vfiy~tgHG~~g~i~~~~~~~vt~~~f~~~L~~~~~~~~yk~L~~~~~d~vFvY~s-~HGg~~~~~~~~~~~l~~~dL~ 214 (368)
..-|-|+.||.|.-. ...|+. +..+..++.+-..+.-+. .+....|.| |-|...|+.. ++.
T Consensus 175 ~~~llfs~HG~P~~~-~~~gDp-Y~~~~~~t~~~l~e~l~~-------~~~~~~fqSrg~g~~~Wl~P---------~~~ 236 (310)
T 2h1v_A 175 NAMLIVSAHSLPEKI-KEFGDP-YPDQLHESAKLIAEGAGV-------SEYAVGWQSEGNTPDPWLGP---------DVQ 236 (310)
T ss_dssp SEEEEEEEECCBGGG-GGGTCC-HHHHHHHHHHHHHHHHTC-------SCEEEEEESCCCCSSCBSSC---------BHH
T ss_pred CceEEEecCCCchhh-ccCCCC-hHHHHHHHHHHHHHHcCC-------CCEEEEEEcCCCCCCCcCCC---------CHH
Confidence 456778999998422 112333 555555555544444322 355667777 5677777766 678
Q ss_pred HHHHHHHHhcccceEEEE
Q psy6307 215 DALEQMWQKRRYHEVFFM 232 (368)
Q Consensus 215 ~~L~~M~~k~~y~~lv~i 232 (368)
++|+.+.+++.+++++++
T Consensus 237 ~~l~~l~~~~G~k~v~V~ 254 (310)
T 2h1v_A 237 DLTRDLFEQKGYQAFVYV 254 (310)
T ss_dssp HHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHcCCceEEEE
Confidence 888888655377887765
No 28
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=33.25 E-value=43 Score=29.35 Aligned_cols=120 Identities=11% Similarity=0.116 Sum_probs=69.6
Q ss_pred CcEEEEEeCCCCCC-Ccchh--hhHHHHHHHHHhCCCCCCCEEEEecCCCCCCCCCCCCCeeeeCCCCCCCccCCCcccc
Q psy6307 24 NNWAVLVDTSRFWF-NYRHV--ANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDVEVD 100 (368)
Q Consensus 24 ~~wAVlvagS~~w~-NYRHq--adv~~~Y~~L~~~Gi~d~~Ii~m~~DDia~n~~Np~pG~i~n~~~~~~nvy~~~v~iD 100 (368)
...|+||.-+++-. .-|.- .|+-.+-++|++.|+. +.+ +
T Consensus 43 ~g~ALIInn~~f~~~~~R~G~~~Da~~L~~~f~~LgF~---V~~------------------~----------------- 84 (178)
T 2h54_A 43 TRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYS---VDV------------------K----------------- 84 (178)
T ss_dssp CCEEEEEECCCCSSSCCCTTHHHHHHHHHHHHHHTTCE---EEE------------------E-----------------
T ss_pred CCEEEEEehhhcCCCccCCCCHHHHHHHHHHHHHCCCE---EEE------------------e-----------------
Confidence 46788888776421 13333 3777788888888871 211 1
Q ss_pred CCCCCCCHHHHHHHHcCCCCCCCCCCcccccCCCccEEEEecCCCCCCccccCCC-----cccCHHHHHHHHHHHhhhcc
Q psy6307 101 YRGYEVTVENFIRLLTGRLPPSTPRSKQLLTDEGSNILIYLTGHGGDGFLKFQDS-----EEVTSQELGDALEQMWQKRR 175 (368)
Q Consensus 101 Y~g~~vt~enfl~vL~G~~~~~~p~~k~l~s~~~d~vfiy~tgHG~~g~i~~~~~-----~~vt~~~f~~~L~~~~~~~~ 175 (368)
.++|.+.+.+.|..=. .+..-...|-.++|+.+||..|.|.-.|+ +.+.-+++++.+.+..
T Consensus 85 ---~dlt~~em~~~l~~f~-------~~~d~~~~d~~v~~~lsHG~~g~i~g~D~~~~~~~~v~l~~I~~~f~~~~---- 150 (178)
T 2h54_A 85 ---KNLTASDMTTELEAFA-------HRPEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKN---- 150 (178)
T ss_dssp ---ESCCHHHHHHHHHHHH-------TCGGGGGCSCEEEEEESCBCSSCEECTTCCSSSCCEECHHHHHHHHSTTT----
T ss_pred ---cCCCHHHHHHHHHHHH-------hhhhcCCCCEEEEEEecCCCCCeEEeecCCcccCcEEEHHHHHHHHhhcC----
Confidence 1255666666665211 01111234567888889999988876676 3566665555554321
Q ss_pred ccccccCCCceEEEEEeecCCC
Q psy6307 176 YHELLTDEGSNILIYLTGHGGD 197 (368)
Q Consensus 176 yk~L~~~~~d~vFvY~s~HGg~ 197 (368)
=..|. ..-.||+.=+|.|++
T Consensus 151 CpsL~--gKPKlffiqACRg~~ 170 (178)
T 2h54_A 151 CPSLK--DKPKVIIIQACRGDS 170 (178)
T ss_dssp CGGGT--TSCEEEEEESCSSSB
T ss_pred Chhhc--CCceEEEEECCCCCC
Confidence 11222 234589999999975
Done!