Query psy6309
Match_columns 134
No_of_seqs 116 out of 169
Neff 4.6
Searched_HMMs 29240
Date Fri Aug 16 23:04:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6309.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6309hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v32_B Ribonuclease ZC3H12A; r 100.0 9.1E-48 3.1E-52 302.3 4.7 132 2-134 35-183 (185)
2 3v33_A Ribonuclease ZC3H12A; r 100.0 1.6E-46 5.5E-51 302.7 3.2 132 2-133 35-182 (223)
3 3v32_B Ribonuclease ZC3H12A; r 98.0 2.4E-07 8.4E-12 72.4 -2.1 74 3-106 92-165 (185)
4 3v33_A Ribonuclease ZC3H12A; r 97.9 4.8E-07 1.7E-11 72.7 -2.2 74 3-106 92-165 (223)
5 4g26_A Pentatricopeptide repea 97.9 1.9E-05 6.4E-10 67.6 6.3 65 38-111 385-452 (501)
6 3ix7_A Uncharacterized protein 91.7 0.23 7.8E-06 36.6 4.6 23 64-86 85-107 (134)
7 3i8o_A KH domain-containing pr 88.3 0.29 9.9E-06 36.5 2.8 23 64-86 93-115 (142)
8 1o4w_A PIN (PILT N-terminus) d 86.1 0.57 2E-05 33.4 3.2 20 64-84 99-118 (147)
9 2lcq_A Putative toxin VAPC6; P 81.3 0.6 2E-05 34.2 1.6 23 63-85 83-105 (165)
10 1v96_A Hypothetical protein PH 79.3 1.2 4E-05 30.9 2.5 27 63-89 95-123 (149)
11 2h1c_A Trafficking protein B; 73.7 2.2 7.6E-05 28.5 2.6 26 63-88 101-128 (139)
12 1w8i_A Putative VAPC ribonucle 71.3 2 6.8E-05 30.4 2.0 28 62-91 99-126 (156)
13 3tnd_A TRNA(FMet)-specific end 66.4 4.1 0.00014 27.4 2.8 22 63-84 95-116 (132)
14 3zvk_A VAPC2, toxin of toxin-a 66.3 3.7 0.00013 27.7 2.5 22 63-84 96-117 (134)
15 3h87_A Putative uncharacterize 66.2 4 0.00014 29.8 2.8 27 63-91 111-137 (156)
16 3dbo_B Uncharacterized protein 63.7 3.8 0.00013 29.5 2.3 27 63-91 112-138 (150)
17 2fe1_A Conserved hypothetical 62.6 3.7 0.00013 29.1 2.0 22 63-84 122-143 (156)
18 1v8p_A Hypothetical protein PA 55.8 7.7 0.00026 28.2 2.7 29 63-91 114-143 (158)
19 3iz6_S 40S ribosomal protein S 37.8 13 0.00044 27.9 1.5 34 38-75 107-140 (146)
20 3u5c_T 40S ribosomal protein S 37.6 19 0.00063 26.9 2.4 34 38-75 105-138 (144)
21 3fij_A LIN1909 protein; 11172J 35.8 43 0.0015 25.6 4.3 31 44-84 40-70 (254)
22 2dok_A Telomerase-binding prot 33.4 18 0.0006 26.7 1.7 24 63-86 117-161 (186)
23 3tvt_A Disks large 1 tumor sup 30.7 42 0.0014 26.8 3.6 42 72-122 250-291 (292)
24 3h7i_A Ribonuclease H, RNAse H 27.4 83 0.0029 25.9 4.9 45 37-91 111-160 (305)
25 3ney_A 55 kDa erythrocyte memb 24.9 52 0.0018 24.8 3.0 30 71-104 162-191 (197)
26 2xsg_A Ccman5; hydrolase, mann 23.6 11 0.00038 34.8 -1.2 70 44-122 447-528 (774)
27 3efb_A Probable SOR-operon reg 23.4 1E+02 0.0035 23.8 4.5 56 46-101 86-151 (266)
28 3dgp_A RNA polymerase II trans 21.3 51 0.0017 22.1 2.1 58 44-103 14-75 (80)
29 1fex_A TRF2-interacting telome 21.3 20 0.00069 22.3 0.0 32 60-91 4-38 (59)
30 4f8a_A Potassium voltage-gated 20.7 75 0.0026 20.9 2.9 32 73-104 117-148 (160)
No 1
>3v32_B Ribonuclease ZC3H12A; rossmann-like sandwich fold, RNAse, cytoplastic, hydrolase; 2.00A {Homo sapiens} PDB: 3v34_A
Probab=100.00 E-value=9.1e-48 Score=302.28 Aligned_cols=132 Identities=42% Similarity=0.679 Sum_probs=115.4
Q ss_pred CcccCceeecccccccceeeeeecC--cccccCChHH---------------HHHHhhhhcCcEEeCCCcccCCcccccc
Q psy6309 2 SYKSGILHYTPSRRVDGKLQCAYDD--RYIPFRSPQV---------------FIQLTYFVSGILHYTPSRRVDGKLQCAY 64 (134)
Q Consensus 2 ~~~~g~~~~~p~r~i~~~~~~~~dd--r~I~~~~p~~---------------~lqlale~~G~l~~TPsr~~~gkr~~~y 64 (134)
+|.||....|+||+|..++.+|+.. +.|++|+|+| +|++ |+++|+|++|||+++.|++++||
T Consensus 35 A~~~g~~~~Fs~rgI~~aV~yf~~rGh~~v~VfvP~~r~~~~~~~~~~~d~~~L~~-L~~~g~l~~TPs~~~~g~~~~~y 113 (185)
T 3v32_B 35 AMSHGNKEVFSCRGILLAVNWFLERGHTDITVFVPSWRKEQPRPDVPITDQHILRE-LEKKKILVFTPSRRVGGKRVVCY 113 (185)
T ss_dssp HHHHTTTTSEEHHHHHHHHHHHHHTTCCCEEEEEEGGGGSCCCTTSCEECTHHHHH-HHHTTCEEEECCCC-------CC
T ss_pred HhhhCCCCCcCHHHHHHHHHHHHHcCCCceEEEechHhhhcccccCCCCCHHHHHH-HHHCCCEEECCCcccCCCcccCc
Confidence 4667777789999999999999998 5688888888 2344 57999999999999999999999
Q ss_pred chHHHHHHHhhcCCEEEeCchhhHHHhhcHHHHHHHhcccccceecCCeEecCCCCCCCCCCChhhhhcC
Q psy6309 65 DDRYIVQVATEYDGVIVSNDRYRDIMQENDKWKATIERRLLMFNFVKELLIFPQDPLGRDGPSLDEFLRF 134 (134)
Q Consensus 65 DDr~il~~A~e~~G~IVSND~fRD~~~e~p~~r~~I~~RlL~~tf~gd~fm~pdDplGr~Gp~L~~~L~~ 134 (134)
||+|||++|+++||+|||||+||||++|+|+|+++|++|+|+|||++|+||||||||||+||+|+|||+.
T Consensus 114 dD~~il~~A~~~~g~IVSND~~rD~~~~~p~~k~~Ie~rli~ytFv~d~Fmp~~dplgr~gp~l~~~l~~ 183 (185)
T 3v32_B 114 DDRFIVKLAYESDGIVVSNDTYRDLQGERQEWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRK 183 (185)
T ss_dssp HHHHHHHHHHHTTCEEECSCCCHHHHHHCHHHHHHHHHHEECCEEETTEEECCSSTTTTSSCCHHHHTBS
T ss_pred cHHHHHHHHHHcCCEEEeCccHHHHHhhCHHHHHHHHhCcceeEEECCEEcCCCCCCCCCCCCHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999983
No 2
>3v33_A Ribonuclease ZC3H12A; rossmann-like sandwich fold, RNAse, cytoplastic, hydrolase; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-46 Score=302.65 Aligned_cols=132 Identities=43% Similarity=0.674 Sum_probs=122.5
Q ss_pred CcccCceeecccccccceeeeeecC--cccccCChHHH--------------HHHhhhhcCcEEeCCCcccCCccccccc
Q psy6309 2 SYKSGILHYTPSRRVDGKLQCAYDD--RYIPFRSPQVF--------------IQLTYFVSGILHYTPSRRVDGKLQCAYD 65 (134)
Q Consensus 2 ~~~~g~~~~~p~r~i~~~~~~~~dd--r~I~~~~p~~~--------------lqlale~~G~l~~TPsr~~~gkr~~~yD 65 (134)
+|.||....|+||+|..++.+|+.. +.|++|+|.|. +...|+++|+|++|||+++.|++++|||
T Consensus 35 A~~~g~~~~Fs~rgI~~aV~yF~~RGh~~V~VfvP~~r~~~~~~~~~~~d~~~L~~L~k~g~L~~TPs~~v~G~r~~syd 114 (223)
T 3v33_A 35 AMSHGNKEVFSCRGILLAVNWFLERGHTDITVFVPSWRKEQPRPDVPITDQHILRELEKKKILVFTPSRRVGGKRVVCYD 114 (223)
T ss_dssp HHHSSSTTSEEHHHHHHHHHHHHTTTCCCEEEEEEGGGGSCCCTTSCEESTHHHHHHHHTTCEEEECEEEETTEEEECCH
T ss_pred HhhhCCCCCcCHHHHHHHHHHHHHcCCCceEEEechhhhccccccCCCCcHHHHHHHHHCCCEEECCCCCcCCccccccc
Confidence 4677777788999999999999999 56888888882 2234579999999999999999999999
Q ss_pred hHHHHHHHhhcCCEEEeCchhhHHHhhcHHHHHHHhcccccceecCCeEecCCCCCCCCCCChhhhhc
Q psy6309 66 DRYIVQVATEYDGVIVSNDRYRDIMQENDKWKATIERRLLMFNFVKELLIFPQDPLGRDGPSLDEFLR 133 (134)
Q Consensus 66 Dr~il~~A~e~~G~IVSND~fRD~~~e~p~~r~~I~~RlL~~tf~gd~fm~pdDplGr~Gp~L~~~L~ 133 (134)
|+|||++|+++||+|||||+||||++|+|+|++||++|+|+|||++|+||||||||||+||+|+|||+
T Consensus 115 D~~iL~~A~~~~g~IVSND~yRD~~~e~p~~k~~Ie~rlI~ytFv~D~FmppdDplgR~Gp~l~~~L~ 182 (223)
T 3v33_A 115 DRFIVKLAYESDGIVVSNDTYRDLQGERQEWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLR 182 (223)
T ss_dssp HHHHHHHHHHTTCEEECSCCCHHHHTTCHHHHHHHHHHEECCEEETTEEECCSSTTCTTSCCHHHHTB
T ss_pred hHHHHHHHHHcCCEEEeCccHHHHHhhCHHHHHHHHhCeeeEEEECCEEeCCCCcccCCCCCHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999997
No 3
>3v32_B Ribonuclease ZC3H12A; rossmann-like sandwich fold, RNAse, cytoplastic, hydrolase; 2.00A {Homo sapiens} PDB: 3v34_A
Probab=98.04 E-value=2.4e-07 Score=72.45 Aligned_cols=74 Identities=32% Similarity=0.589 Sum_probs=48.9
Q ss_pred cccCceeecccccccceeeeeecCcccccCChHHHHHHhhhhcCcEEeCCCcccCCccccccchHHHHHHHhhcCCEEEe
Q psy6309 3 YKSGILHYTPSRRVDGKLQCAYDDRYIPFRSPQVFIQLTYFVSGILHYTPSRRVDGKLQCAYDDRYIVQVATEYDGVIVS 82 (134)
Q Consensus 3 ~~~g~~~~~p~r~i~~~~~~~~ddr~I~~~~p~~~lqlale~~G~l~~TPsr~~~gkr~~~yDDr~il~~A~e~~G~IVS 82 (134)
++.|++++||||.+.|++.+||||+|| ++.|.+..|+|+ + .|+| -+++.+
T Consensus 92 ~~~g~l~~TPs~~~~g~~~~~ydD~~i--------l~~A~~~~g~IV-------------S-ND~~-rD~~~~------- 141 (185)
T 3v32_B 92 EKKKILVFTPSRRVGGKRVVCYDDRFI--------VKLAYESDGIVV-------------S-NDTY-RDLQGE------- 141 (185)
T ss_dssp HHTTCEEEECCCC-------CCHHHHH--------HHHHHHTTCEEE-------------C-SCCC-HHHHHH-------
T ss_pred HHCCCEEECCCcccCCCcccCccHHHH--------HHHHHHcCCEEE-------------e-CccH-HHHHhh-------
Confidence 367999999999999999999999999 999998888888 2 2222 234444
Q ss_pred CchhhHHHhhcHHHHHHHhccccc
Q psy6309 83 NDRYRDIMQENDKWKATIERRLLM 106 (134)
Q Consensus 83 ND~fRD~~~e~p~~r~~I~~RlL~ 106 (134)
+..++++++++--...++.++.++
T Consensus 142 ~p~~k~~Ie~rli~ytFv~d~Fmp 165 (185)
T 3v32_B 142 RQEWKRFIEERLLMYSFVNDKFMP 165 (185)
T ss_dssp CHHHHHHHHHHEECCEEETTEEEC
T ss_pred CHHHHHHHHhCcceeEEECCEEcC
Confidence 667888888765444455565554
No 4
>3v33_A Ribonuclease ZC3H12A; rossmann-like sandwich fold, RNAse, cytoplastic, hydrolase; 2.00A {Homo sapiens}
Probab=97.94 E-value=4.8e-07 Score=72.74 Aligned_cols=74 Identities=32% Similarity=0.573 Sum_probs=55.9
Q ss_pred cccCceeecccccccceeeeeecCcccccCChHHHHHHhhhhcCcEEeCCCcccCCccccccchHHHHHHHhhcCCEEEe
Q psy6309 3 YKSGILHYTPSRRVDGKLQCAYDDRYIPFRSPQVFIQLTYFVSGILHYTPSRRVDGKLQCAYDDRYIVQVATEYDGVIVS 82 (134)
Q Consensus 3 ~~~g~~~~~p~r~i~~~~~~~~ddr~I~~~~p~~~lqlale~~G~l~~TPsr~~~gkr~~~yDDr~il~~A~e~~G~IVS 82 (134)
++.|++++|||+.+.|++.++|||+|| |+.|.+..|+|+ +. |.| -+++.+
T Consensus 92 ~k~g~L~~TPs~~v~G~r~~sydD~~i--------L~~A~~~~g~IV-------------SN-D~y-RD~~~e------- 141 (223)
T 3v33_A 92 EKKKILVFTPSRRVGGKRVVCYDDRFI--------VKLAYESDGIVV-------------SN-DTY-RDLQGE------- 141 (223)
T ss_dssp HHTTCEEEECEEEETTEEEECCHHHHH--------HHHHHHTTCEEE-------------CS-CCC-HHHHTT-------
T ss_pred HHCCCEEECCCCCcCCccccccchHHH--------HHHHHHcCCEEE-------------eC-ccH-HHHHhh-------
Confidence 357999999999999999999999999 999998888888 22 222 344555
Q ss_pred CchhhHHHhhcHHHHHHHhccccc
Q psy6309 83 NDRYRDIMQENDKWKATIERRLLM 106 (134)
Q Consensus 83 ND~fRD~~~e~p~~r~~I~~RlL~ 106 (134)
+..+|++++++--...++++++++
T Consensus 142 ~p~~k~~Ie~rlI~ytFv~D~Fmp 165 (223)
T 3v33_A 142 RQEWKRFIEERLLMYSFVNDKFMP 165 (223)
T ss_dssp CHHHHHHHHHHEECCEEETTEEEC
T ss_pred CHHHHHHHHhCeeeEEEECCEEeC
Confidence 678899998864444445555554
No 5
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.87 E-value=1.9e-05 Score=67.65 Aligned_cols=65 Identities=23% Similarity=0.330 Sum_probs=55.6
Q ss_pred HHHhhhhcCcEEeCCCcccCCccccccchHHHHHHHhhcCCEEEeCchhhHHHh---hcHHHHHHHhcccccceecC
Q psy6309 38 IQLTYFVSGILHYTPSRRVDGKLQCAYDDRYIVQVATEYDGVIVSNDRYRDIMQ---ENDKWKATIERRLLMFNFVK 111 (134)
Q Consensus 38 lqlale~~G~l~~TPsr~~~gkr~~~yDDr~il~~A~e~~G~IVSND~fRD~~~---e~p~~r~~I~~RlL~~tf~g 111 (134)
++. +.+.+.+.+||.. ++||.|.|=.|-..++.|||||++|||.= .+..|++|-+.|.+.|+|..
T Consensus 385 ~~~-~~~~~~~~~t~~~--------s~DD~~~lyAal~~~~~~vsnD~mRdH~f~l~~~~~F~rW~~~hq~~~~~~~ 452 (501)
T 4g26_A 385 LEK-WKNAGALYATPPG--------SNDDWYWLYAAVSCKCLLVTNDEMRDHLFQLLGNSFFPRWKEKHQVRISVTR 452 (501)
T ss_dssp HHH-HHHTTCEEEECTT--------CCHHHHHHHHHHHHTCEEECCCCCCSGGGGGGTTTHHHHHHHHHEEEEEEET
T ss_pred HHH-HHhcCeEEeCCCC--------CCchHHHHHHHHccCCEEEeccccccchhccCCcHHHHHHHhcCeEEEEecC
Confidence 444 4689999999998 79999999999999999999999999974 34468888999999999874
No 6
>3ix7_A Uncharacterized protein TTHA0540; unknown function, thermus thermophilus HB8, structural genom 2, protein structure initiative; HET: MSE; 2.15A {Thermus thermophilus}
Probab=91.67 E-value=0.23 Score=36.55 Aligned_cols=23 Identities=22% Similarity=0.361 Sum_probs=21.2
Q ss_pred cchHHHHHHHhhcCCEEEeCchh
Q psy6309 64 YDDRYIVQVATEYDGVIVSNDRY 86 (134)
Q Consensus 64 yDDr~il~~A~e~~G~IVSND~f 86 (134)
..|..++++|.+.||++||||.-
T Consensus 85 ~vD~~ll~lA~~~~~~lvTnD~~ 107 (134)
T 3ix7_A 85 SVDEKLLFLARDLEAALVTNDHA 107 (134)
T ss_dssp SHHHHHHHHHHHTTCEEEESCHH
T ss_pred cHHHHHHHHHHHhCCEEEeCCHH
Confidence 57889999999999999999976
No 7
>3i8o_A KH domain-containing protein MJ1533; APC89320.5, methanocaldococcus jannaschii DSM 2661, structural genomics, PSI-2; 2.64A {Methanocaldococcus jannaschii}
Probab=88.27 E-value=0.29 Score=36.47 Aligned_cols=23 Identities=26% Similarity=0.344 Sum_probs=21.1
Q ss_pred cchHHHHHHHhhcCCEEEeCchh
Q psy6309 64 YDDRYIVQVATEYDGVIVSNDRY 86 (134)
Q Consensus 64 yDDr~il~~A~e~~G~IVSND~f 86 (134)
.-|..++++|.+.||.+||||.-
T Consensus 93 ~vD~~l~~lA~~~~a~lvTnD~~ 115 (142)
T 3i8o_A 93 EIDAMIRKVAKETNSILLTSDWI 115 (142)
T ss_dssp SHHHHHHHHHHHTTCEEEESCHH
T ss_pred cHHHHHHHHHHHhCCEEEcCCHH
Confidence 46889999999999999999976
No 8
>1o4w_A PIN (PILT N-terminus) domain; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative, PS translation; 1.90A {Archaeoglobus fulgidus} SCOP: c.120.1.1
Probab=86.13 E-value=0.57 Score=33.39 Aligned_cols=20 Identities=25% Similarity=0.567 Sum_probs=19.0
Q ss_pred cchHHHHHHHhhcCCEEEeCc
Q psy6309 64 YDDRYIVQVATEYDGVIVSND 84 (134)
Q Consensus 64 yDDr~il~~A~e~~G~IVSND 84 (134)
+ |..|+..|.+.+.++||||
T Consensus 99 ~-D~~Ila~A~~~~~~LvT~D 118 (147)
T 1o4w_A 99 G-DPSLIEAAEKYGCILITND 118 (147)
T ss_dssp S-HHHHHHHHHHHTCEEECCC
T ss_pred c-hHHHHHHHHHhCCEEEECC
Confidence 6 8899999999999999999
No 9
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=81.35 E-value=0.6 Score=34.21 Aligned_cols=23 Identities=30% Similarity=0.371 Sum_probs=21.0
Q ss_pred ccchHHHHHHHhhcCCEEEeCch
Q psy6309 63 AYDDRYIVQVATEYDGVIVSNDR 85 (134)
Q Consensus 63 ~yDDr~il~~A~e~~G~IVSND~ 85 (134)
+..|..++.+|.+.++.|||||.
T Consensus 83 s~~D~~lIaLA~~l~~~lvT~D~ 105 (165)
T 2lcq_A 83 SKADIEVLALAYELKGEIFSDDY 105 (165)
T ss_dssp CHHHHHHHHHHHHHTCCEECCCH
T ss_pred CHHHHHHHHhHHHhCCeEEcCcH
Confidence 46789999999999999999995
No 10
>1v96_A Hypothetical protein PH0500; rossmann fold, tRNA synthetase, nucleotide binding protein, structural genomics; 1.75A {Pyrococcus horikoshii} SCOP: c.120.1.1 PDB: 1ye5_A 1y82_A
Probab=79.28 E-value=1.2 Score=30.95 Aligned_cols=27 Identities=26% Similarity=0.442 Sum_probs=23.4
Q ss_pred ccchHHHHHHHhhcCCEEEeCc--hhhHH
Q psy6309 63 AYDDRYIVQVATEYDGVIVSND--RYRDI 89 (134)
Q Consensus 63 ~yDDr~il~~A~e~~G~IVSND--~fRD~ 89 (134)
+..|.+++..|..+|+.|||+| .|+.+
T Consensus 95 ~~~D~lIaA~A~~~~~~lvT~D~kdf~~i 123 (149)
T 1v96_A 95 DMEDIITATTAIYTNSLLVTDDPKRYEPI 123 (149)
T ss_dssp CHHHHHHHHHHHHHTCEEEESCHHHHGGG
T ss_pred CHhHHHHHHHHHHcCCEEEECCHHHHhhh
Confidence 5689999999999999999999 37644
No 11
>2h1c_A Trafficking protein B; DNA binding, PIN domain, RHH domain, gene regulation; 1.80A {Neisseria gonorrhoeae} SCOP: c.120.1.1 PDB: 2bsq_A* 2h1o_A*
Probab=73.70 E-value=2.2 Score=28.53 Aligned_cols=26 Identities=23% Similarity=0.316 Sum_probs=22.6
Q ss_pred ccchHHHHHHHhhcCCEEEeCc--hhhH
Q psy6309 63 AYDDRYIVQVATEYDGVIVSND--RYRD 88 (134)
Q Consensus 63 ~yDDr~il~~A~e~~G~IVSND--~fRD 88 (134)
+..|.+|+..|.++|..+||+| .|+.
T Consensus 101 ~~~D~liaA~A~~~~~~lvT~d~~df~~ 128 (139)
T 2h1c_A 101 AAADGYIAATAKQHSLTVATRDTGSFFA 128 (139)
T ss_dssp CHHHHHHHHHHHHHTCEEECSCCHHHHH
T ss_pred CccHHHHHHHHHHcCCeEEECCHHHHhh
Confidence 5789999999999999999998 3543
No 12
>1w8i_A Putative VAPC ribonuclease AF_1683; structural genomics, unknown function, hypothetical protein, PSI, protein structure initiative, MCSG; 2.10A {Archaeoglobus fulgidus} SCOP: c.120.1.1
Probab=71.32 E-value=2 Score=30.35 Aligned_cols=28 Identities=25% Similarity=0.227 Sum_probs=23.5
Q ss_pred cccchHHHHHHHhhcCCEEEeCchhhHHHh
Q psy6309 62 CAYDDRYIVQVATEYDGVIVSNDRYRDIMQ 91 (134)
Q Consensus 62 ~~yDDr~il~~A~e~~G~IVSND~fRD~~~ 91 (134)
.+..|.+++..|.++|+.|+|+| +|+..
T Consensus 99 l~~~Dali~A~A~~~g~~l~T~D--~dF~~ 126 (156)
T 1w8i_A 99 FSYTDAISEVVAEELKLKLISYD--SRFSL 126 (156)
T ss_dssp CCHHHHHHHHHHHHHTCEEECSC--TTCSS
T ss_pred CCHhHHHHHHHHHHcCCEEEEeC--cccCc
Confidence 35789999999999999999988 55533
No 13
>3tnd_A TRNA(FMet)-specific endonuclease VAPC; PIN domain, spovt/ABRB-like domain, ribonuclease, DNA-bindin translation; 2.70A {Shigella flexneri}
Probab=66.38 E-value=4.1 Score=27.44 Aligned_cols=22 Identities=27% Similarity=0.218 Sum_probs=20.7
Q ss_pred ccchHHHHHHHhhcCCEEEeCc
Q psy6309 63 AYDDRYIVQVATEYDGVIVSND 84 (134)
Q Consensus 63 ~yDDr~il~~A~e~~G~IVSND 84 (134)
+..|++|+..|..+|+.+||+|
T Consensus 95 ~~~D~lIaA~A~~~~~~lvT~d 116 (132)
T 3tnd_A 95 GPFDQMIAGHARSRGLIIVTNN 116 (132)
T ss_dssp CHHHHHHHHHHHHTTCEEEESC
T ss_pred CchHHHHHHHHHHcCCEEEECC
Confidence 5689999999999999999998
No 14
>3zvk_A VAPC2, toxin of toxin-antitoxin system; antitoxin-toxin-DNA complex, protein-DNA complex; HET: DNA MES; 2.50A {Rickettsia felis}
Probab=66.32 E-value=3.7 Score=27.75 Aligned_cols=22 Identities=23% Similarity=0.329 Sum_probs=20.6
Q ss_pred ccchHHHHHHHhhcCCEEEeCc
Q psy6309 63 AYDDRYIVQVATEYDGVIVSND 84 (134)
Q Consensus 63 ~yDDr~il~~A~e~~G~IVSND 84 (134)
+..|.+|+..|..+|+.+||+|
T Consensus 96 ~~~D~lIaA~A~~~~~~lvT~d 117 (134)
T 3zvk_A 96 GNNDLLIASHAIAENATLVTNN 117 (134)
T ss_dssp CHHHHHHHHHHHHHTCEEEESS
T ss_pred CccHHHHHHHHHHCCCEEEECC
Confidence 4689999999999999999998
No 15
>3h87_A Putative uncharacterized protein; toxin antitoxin complex, vapbc complex, RHH motif, structura genomics; 1.49A {Mycobacterium tuberculosis}
Probab=66.18 E-value=4 Score=29.82 Aligned_cols=27 Identities=19% Similarity=0.148 Sum_probs=23.3
Q ss_pred ccchHHHHHHHhhcCCEEEeCchhhHHHh
Q psy6309 63 AYDDRYIVQVATEYDGVIVSNDRYRDIMQ 91 (134)
Q Consensus 63 ~yDDr~il~~A~e~~G~IVSND~fRD~~~ 91 (134)
...|.+|...|..+|..+|||| +|+..
T Consensus 111 ~~~D~lIAAtA~~~gl~LvT~d--~dF~~ 137 (156)
T 3h87_A 111 SIPDLLIAATAELSGLTVLHVD--KDFDA 137 (156)
T ss_dssp CHHHHHHHHHHHHHTCEEEESC--THHHH
T ss_pred ChhHHHHHHHHHHCCCEEEEeC--hhhhh
Confidence 5689999999999999999998 66643
No 16
>3dbo_B Uncharacterized protein; toxin antitoxin complex, vapbc, structural genomics, PSI-2, protein structure initiative; 1.76A {Mycobacterium tuberculosis}
Probab=63.70 E-value=3.8 Score=29.51 Aligned_cols=27 Identities=22% Similarity=0.338 Sum_probs=23.1
Q ss_pred ccchHHHHHHHhhcCCEEEeCchhhHHHh
Q psy6309 63 AYDDRYIVQVATEYDGVIVSNDRYRDIMQ 91 (134)
Q Consensus 63 ~yDDr~il~~A~e~~G~IVSND~fRD~~~ 91 (134)
...|.+|...|..+|..+||+| +|+..
T Consensus 112 ~~~D~lIaA~A~~~~~~LvT~d--~dF~~ 138 (150)
T 3dbo_B 112 RINDLWIAAVAASRALPVITQD--DDFAA 138 (150)
T ss_dssp BHHHHHHHHHHHHTTCCEEESS--SSGGG
T ss_pred CCchHHHHHHHHHCCCEEEECC--hhhhh
Confidence 3579999999999999999999 56643
No 17
>2fe1_A Conserved hypothetical protein PAE0151; PIN domain, structural genomics, unknown function; 2.20A {Pyrobaculum aerophilum} SCOP: c.120.1.1
Probab=62.64 E-value=3.7 Score=29.10 Aligned_cols=22 Identities=23% Similarity=0.282 Sum_probs=20.6
Q ss_pred ccchHHHHHHHhhcCCEEEeCc
Q psy6309 63 AYDDRYIVQVATEYDGVIVSND 84 (134)
Q Consensus 63 ~yDDr~il~~A~e~~G~IVSND 84 (134)
+..|..++..|.+.|+.++|+|
T Consensus 122 ~~~Dal~lA~A~~~~~~LvT~D 143 (156)
T 2fe1_A 122 TVYDAAYVALAEKIGGKLLTLD 143 (156)
T ss_dssp CHHHHHHHHHHHHHTCEEECSC
T ss_pred CHHHHHHHHHHHHcCCCEEeCC
Confidence 5679999999999999999999
No 18
>1v8p_A Hypothetical protein PAE2754; PIN-domain, tetramer, structural genomics, unknown function; 2.52A {Pyrobaculum aerophilum} SCOP: c.120.1.1 PDB: 1v8o_A
Probab=55.75 E-value=7.7 Score=28.22 Aligned_cols=29 Identities=21% Similarity=0.182 Sum_probs=23.7
Q ss_pred ccchHHHHHHHhhcCCEEEeCc-hhhHHHh
Q psy6309 63 AYDDRYIVQVATEYDGVIVSND-RYRDIMQ 91 (134)
Q Consensus 63 ~yDDr~il~~A~e~~G~IVSND-~fRD~~~ 91 (134)
+..|.+++.+|.+.|+.++|.| ++.+...
T Consensus 114 s~yDA~~lAlA~~~g~~L~T~D~~L~~~a~ 143 (158)
T 1v8p_A 114 TFYDASYAYVAESSGLVLVTQDRELLAKTK 143 (158)
T ss_dssp CHHHHHHHHHHHHTTCEEECSCHHHHHHST
T ss_pred CHHHHHHHHHHHHhCCeEEeCCHHHHHHHH
Confidence 5679999999999999999999 4544443
No 19
>3iz6_S 40S ribosomal protein S19 (S19E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=37.76 E-value=13 Score=27.90 Aligned_cols=34 Identities=29% Similarity=0.378 Sum_probs=26.2
Q ss_pred HHHhhhhcCcEEeCCCcccCCccccccchHHHHHHHhh
Q psy6309 38 IQLTYFVSGILHYTPSRRVDGKLQCAYDDRYIVQVATE 75 (134)
Q Consensus 38 lqlale~~G~l~~TPsr~~~gkr~~~yDDr~il~~A~e 75 (134)
||. ||+.|+|..+|. .|+++++..-+.+=++|.+
T Consensus 107 LQq-LE~~g~Vek~~~---gGR~lT~~G~~~LD~iA~~ 140 (146)
T 3iz6_S 107 LQQ-LQKMGIIDVDPK---GGRLITSQGRRDLDQVAGR 140 (146)
T ss_dssp HHH-HHHHTSEEEETT---TEEEECHHHHHHHHHHHHH
T ss_pred HHH-HHHCCCeEecCC---CCcEECHhHHHHHHHHHHH
Confidence 776 599999999985 3778887777776666665
No 20
>3u5c_T 40S ribosomal protein S19-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_S 3o30_M 3o2z_M 3u5g_T 3jyv_T*
Probab=37.65 E-value=19 Score=26.93 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=26.1
Q ss_pred HHHhhhhcCcEEeCCCcccCCccccccchHHHHHHHhh
Q psy6309 38 IQLTYFVSGILHYTPSRRVDGKLQCAYDDRYIVQVATE 75 (134)
Q Consensus 38 lqlale~~G~l~~TPsr~~~gkr~~~yDDr~il~~A~e 75 (134)
||. ||+.|+|..+|. .|+++++..-+.+=++|.+
T Consensus 105 LQq-LE~~g~vek~~~---~GR~lT~~G~~~LD~iA~~ 138 (144)
T 3u5c_T 105 LQA-LEKIGIVEISPK---GGRRISENGQRDLDRIAAQ 138 (144)
T ss_dssp HHH-HHHTTSEECCSS---SSCEECHHHHHHHHHHHHH
T ss_pred HHH-HHHCCCeeecCC---CCcEECHhHHHHHHHHHHH
Confidence 776 599999999984 4788887776766666655
No 21
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=35.81 E-value=43 Score=25.57 Aligned_cols=31 Identities=23% Similarity=0.325 Sum_probs=21.0
Q ss_pred hcCcEEeCCCcccCCccccccchHHHHHHHhhcCCEEEeCc
Q psy6309 44 VSGILHYTPSRRVDGKLQCAYDDRYIVQVATEYDGVIVSND 84 (134)
Q Consensus 44 ~~G~l~~TPsr~~~gkr~~~yDDr~il~~A~e~~G~IVSND 84 (134)
.-+..+..|.-. +.. +-++..+.||+|+|+-
T Consensus 40 aG~~pv~lp~~~---------~~~-~~~~l~~~DGlil~GG 70 (254)
T 3fij_A 40 VGGFPIALPIDD---------PST-AVQAISLVDGLLLTGG 70 (254)
T ss_dssp HTCEEEEECCCC---------GGG-HHHHHHTCSEEEECCC
T ss_pred CCCEEEEEeCCC---------chH-HHHHHhhCCEEEECCC
Confidence 344666666542 223 6677789999999986
No 22
>2dok_A Telomerase-binding protein EST1A; telomerase-associated protein, unknown function; 1.80A {Homo sapiens} PDB: 2hww_A 2hwx_A
Probab=33.41 E-value=18 Score=26.71 Aligned_cols=24 Identities=25% Similarity=0.531 Sum_probs=18.4
Q ss_pred ccchHHHHHHHhhc---------------------CCEEEeCchh
Q psy6309 63 AYDDRYIVQVATEY---------------------DGVIVSNDRY 86 (134)
Q Consensus 63 ~yDDr~il~~A~e~---------------------~G~IVSND~f 86 (134)
...|.-||+.|..+ +.++||||.-
T Consensus 117 ~~~D~~IL~~a~~l~~~~~~~~~~~~~~~~~~~~~~vvLvTnD~n 161 (186)
T 2dok_A 117 GNNDDLILSCCLHYCKDKAKDFMPASKEEPIRLLREVVLLTDDRN 161 (186)
T ss_dssp CCHHHHHHHHHHTTCCCCGGGGCCC---CCCEEEEEEEEECCCHH
T ss_pred CCccHHHHHHHHHHHHhcccccccccccccccCCCcEEEEeCcHH
Confidence 34677899999854 5689999964
No 23
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=30.70 E-value=42 Score=26.80 Aligned_cols=42 Identities=19% Similarity=0.293 Sum_probs=24.0
Q ss_pred HHhhcCCEEEeCchhhHHHhhcHHHHHHHhcccccceecCCeEecCCCCCC
Q psy6309 72 VATEYDGVIVSNDRYRDIMQENDKWKATIERRLLMFNFVKELLIFPQDPLG 122 (134)
Q Consensus 72 ~A~e~~G~IVSND~fRD~~~e~p~~r~~I~~RlL~~tf~gd~fm~pdDplG 122 (134)
++..+|.+| .||++-+.+++ ++++|+.-.... .|+|-.+.||
T Consensus 250 ~~~~fD~vI-vNddle~a~~~---l~~iI~~e~~~~-----~WVP~~~~l~ 291 (292)
T 3tvt_A 250 FGEYFTGVV-QGDTIEEIYSK---VKSMIWSQSGPT-----IWVPSKESLG 291 (292)
T ss_dssp HTTTCSEEE-CCSSHHHHHHH---HHHHHHHHTCSE-----EEEEC-----
T ss_pred hhhhCCEEE-ECcCHHHHHHH---HHHHHHHhhCCC-----eEecCccccc
Confidence 334456555 58888777766 888887654433 5677777776
No 24
>3h7i_A Ribonuclease H, RNAse H; BPT4 RNAse H, 5'-3' exonuclease, hydrolase, endonuclease; 1.50A {Enterobacteria phage T4} PDB: 2ihn_A 3h8w_A 3h8j_A 1tfr_A 3h8s_A
Probab=27.41 E-value=83 Score=25.92 Aligned_cols=45 Identities=16% Similarity=0.080 Sum_probs=30.8
Q ss_pred HHHHhhhhcCcEEeCCCcccCCccccccchHHHHHHHhh-----cCCEEEeCchhhHHHh
Q psy6309 37 FIQLTYFVSGILHYTPSRRVDGKLQCAYDDRYIVQVATE-----YDGVIVSNDRYRDIMQ 91 (134)
Q Consensus 37 ~lqlale~~G~l~~TPsr~~~gkr~~~yDDr~il~~A~e-----~~G~IVSND~fRD~~~ 91 (134)
+++..++..|+-++.-.+ -.+|-.|-.+|++ ..-+|||.| +|+.+
T Consensus 111 ~ike~l~a~gi~~l~~~G--------~EADDiIgTLA~~a~~~g~~V~IvSgD--KDl~Q 160 (305)
T 3h7i_A 111 VIDELKAYMPYIVMDIDK--------YEANDHIAVLVKKFSLEGHKILIISSD--GDFTQ 160 (305)
T ss_dssp HHHHHHHHSSSEEECCTT--------CCHHHHHHHHHHHHHHTTCCEEEECSS--CCCGG
T ss_pred HHHHHHHHCCCCEEccCC--------ccHHHHHHHHHHHHHHCCCcEEEEeCC--CCccc
Confidence 578888889998877665 2566677555543 346899999 45543
No 25
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=24.91 E-value=52 Score=24.75 Aligned_cols=30 Identities=17% Similarity=0.305 Sum_probs=19.6
Q ss_pred HHHhhcCCEEEeCchhhHHHhhcHHHHHHHhccc
Q psy6309 71 QVATEYDGVIVSNDRYRDIMQENDKWKATIERRL 104 (134)
Q Consensus 71 ~~A~e~~G~IVSND~fRD~~~e~p~~r~~I~~Rl 104 (134)
+++.++|.+|| ||.+-+-+++ +..+|+.-.
T Consensus 162 ~~~~~fd~viv-Nd~l~~a~~~---l~~ii~~~~ 191 (197)
T 3ney_A 162 QYAHYFDLSLV-NNGVDETLKK---LQEAFDQAC 191 (197)
T ss_dssp HHGGGCSEEEE-ESCHHHHHHH---HHHHHHHCC
T ss_pred hhccCCCEEEE-CCCHHHHHHH---HHHHHHHcc
Confidence 45677887776 7766665555 777776533
No 26
>2xsg_A Ccman5; hydrolase, mannosidase; HET: B3P; 2.00A {Cellulosimicrobium cellulans}
Probab=23.64 E-value=11 Score=34.78 Aligned_cols=70 Identities=14% Similarity=0.083 Sum_probs=51.5
Q ss_pred hcCcEEeCCCcccCCccccccchHHHHHHHhhcCCEEEeCchhhHHHhhc-HHHHHHHhcc-----------cccceecC
Q psy6309 44 VSGILHYTPSRRVDGKLQCAYDDRYIVQVATEYDGVIVSNDRYRDIMQEN-DKWKATIERR-----------LLMFNFVK 111 (134)
Q Consensus 44 ~~G~l~~TPsr~~~gkr~~~yDDr~il~~A~e~~G~IVSND~fRD~~~e~-p~~r~~I~~R-----------lL~~tf~g 111 (134)
+.|.|-...|++++- +|||--|.++|+..|- .+.+..+++.+ -.|+.+.+.- ++..-..+
T Consensus 447 ~~GYvp~svS~TLEY----aydD~~iaq~Ak~LGk----~~d~~~y~~Rs~~ny~nlfd~~~~~~~~~~~tgf~~pr~~d 518 (774)
T 2xsg_A 447 RRGYVAGNPGASVQR----GYDQYGLSVIADELGL----TEEAETLREQASWPIEKLTKPGAWTAADGTQVGLLTPRAAD 518 (774)
T ss_dssp HHTSCTTCHHHHHHH----HHHHHHHHHHHHHTTC----HHHHHHHHHHHHHHHHHHEEEEEEECTTCCEEEEECCBCTT
T ss_pred cCCCcCcchhHHHHH----HHHHHHHHHHHHHcCC----HHHHHHHHHHHHHhHHHhCCchhccccccCccceeeecCCC
Confidence 455555455666653 6999999999999885 36688888887 7898877644 66666667
Q ss_pred CeEecCCCCCC
Q psy6309 112 ELLIFPQDPLG 122 (134)
Q Consensus 112 d~fm~pdDplG 122 (134)
+.|..| ||+-
T Consensus 519 G~w~~~-dP~~ 528 (774)
T 2xsg_A 519 GSWQSA-DHAK 528 (774)
T ss_dssp SCBCCC-CTTS
T ss_pred CCcCCC-Cccc
Confidence 888888 8873
No 27
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=23.40 E-value=1e+02 Score=23.80 Aligned_cols=56 Identities=16% Similarity=0.145 Sum_probs=40.2
Q ss_pred CcEEeCCCccc-CCc-cccccchHHHHHHHhhcCCE--------EEeCchhhHHHhhcHHHHHHHh
Q psy6309 46 GILHYTPSRRV-DGK-LQCAYDDRYIVQVATEYDGV--------IVSNDRYRDIMQENDKWKATIE 101 (134)
Q Consensus 46 G~l~~TPsr~~-~gk-r~~~yDDr~il~~A~e~~G~--------IVSND~fRD~~~e~p~~r~~I~ 101 (134)
+.+.+.|.... .|. ....|.+..+-++|+++||- ++++...|+.+.+.|.++++++
T Consensus 86 ~~~~~V~l~Gg~~~~~~~~~~~n~i~~~lA~~~~~~~~~l~aP~~~~~~~~~~~l~~~~~i~~vl~ 151 (266)
T 3efb_A 86 RQLICVPIIGGPSGKLESRYHVNTLTYSAAAKLKGESHLADFPALLDNPLIRNGIMQSQHFKTISA 151 (266)
T ss_dssp CCCEEEESBCBCTTSSCGGGCHHHHHHHHHHHTTCEECCCCSBSBCSSHHHHHHHHTSHHHHHHHH
T ss_pred CCeEEEEcCCCCCCCCccccCHHHHHHHHHHHhCCeEEEEeCCeecCCHHHHHHHHhChHHHHHHH
Confidence 34666676543 332 23346667788999999985 7889999998888888888765
No 28
>3dgp_A RNA polymerase II transcription factor B subunit; protein-protein complex, beta-alpha-beta spilt, heterodimer, damage, DNA excision; 1.80A {Saccharomyces cerevisiae}
Probab=21.31 E-value=51 Score=22.09 Aligned_cols=58 Identities=7% Similarity=0.021 Sum_probs=37.3
Q ss_pred hcCcEEeCCCcccCCcccccc-chHHHHHHHhhcCCEEEeCchhhHHHhh---cHHHHHHHhcc
Q psy6309 44 VSGILHYTPSRRVDGKLQCAY-DDRYIVQVATEYDGVIVSNDRYRDIMQE---NDKWKATIERR 103 (134)
Q Consensus 44 ~~G~l~~TPsr~~~gkr~~~y-DDr~il~~A~e~~G~IVSND~fRD~~~e---~p~~r~~I~~R 103 (134)
+.+-|.+||+-..+. ..+. +-.-+++||++.|+.+=+||.=|-++-. +..++++++.+
T Consensus 14 ErnRl~~~~g~Ly~~--F~s~~efe~~~~yA~e~gvLlW~~~~kr~~~V~~~gh~~vk~f~k~~ 75 (80)
T 3dgp_A 14 ELDRVITYEGSLYSD--FETSQEYNLLSKYAQDIGVLLWKDDKKKKFFISKEGNSQVLDFAKRK 75 (80)
T ss_dssp CGGGCEEEEEEEEEC--CSCHHHHHHHHHHHHHTTCEEEEETTTTEEEEEGGGHHHHHHHHTTC
T ss_pred hhCceeccceEEEec--CCCHHHHHHHHHHHHHcCeEEEecCCccEEEEeccchHHHHHHHHHH
Confidence 445566677654332 2222 3367899999999998888776665542 35677777654
No 29
>1fex_A TRF2-interacting telomeric RAP1 protein; helix turn helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Synthetic} SCOP: a.4.1.3
Probab=21.26 E-value=20 Score=22.34 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=24.3
Q ss_pred cccccchHHHHHHHhhc---CCEEEeCchhhHHHh
Q psy6309 60 LQCAYDDRYIVQVATEY---DGVIVSNDRYRDIMQ 91 (134)
Q Consensus 60 r~~~yDDr~il~~A~e~---~G~IVSND~fRD~~~ 91 (134)
.++..||..++++..++ |+-+-.|.-|.++.+
T Consensus 4 ~FT~edD~~L~~~v~~~~~~~~~~~Gn~iwk~la~ 38 (59)
T 1fex_A 4 AFTDADDVAILTYVKENARSPSSVTGNALWKAMEK 38 (59)
T ss_dssp CCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccccCCCccHHHHHHHHH
Confidence 46778999999999887 455556777777766
No 30
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=20.71 E-value=75 Score=20.87 Aligned_cols=32 Identities=16% Similarity=0.268 Sum_probs=25.6
Q ss_pred HhhcCCEEEeCchhhHHHhhcHHHHHHHhccc
Q psy6309 73 ATEYDGVIVSNDRYRDIMQENDKWKATIERRL 104 (134)
Q Consensus 73 A~e~~G~IVSND~fRD~~~e~p~~r~~I~~Rl 104 (134)
..++-.+.++.+.|+++++++|.+...+..++
T Consensus 117 ~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l 148 (160)
T 4f8a_A 117 LTYCDLHVIKRDALQKVLEFYTAFSHSFSRNL 148 (160)
T ss_dssp SSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHC
T ss_pred CCceEEEEEcHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455678899999999999999988776655
Done!