BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy631
(110 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2BEI|A Chain A, X-Ray Structure Of Thialysine N-Acetyltransferase (Ssat2)
From Homo Sapiens
pdb|2BEI|B Chain B, X-Ray Structure Of Thialysine N-Acetyltransferase (Ssat2)
From Homo Sapiens
pdb|2Q4V|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Thialysine N- Acetyltransferase (Ssat2) From Homo
Sapiens
pdb|2Q4V|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of
Thialysine N- Acetyltransferase (Ssat2) From Homo
Sapiens
Length = 170
Score = 75.5 bits (184), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 67/114 (58%), Gaps = 7/114 (6%)
Query: 3 DIVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAEDTK 62
+ IR A++ DCG I LI+ELA+++++ D KI + L DGF G+ P + VAE
Sbjct: 3 SVRIREAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGF-GDNPFYHCLVAEILP 61
Query: 63 TNK------LVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESVVK 110
+VGY ++Y++Y ++G+ +YLEDI V YR +G G+ + + V +
Sbjct: 62 APGKLLGPCVVGYGIYYFIYSTWKGRTIYLEDIYVXPEYRGQGIGSKIIKKVAE 115
>pdb|3BJ7|A Chain A, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ7|B Chain B, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ7|C Chain C, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ7|D Chain D, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ8|A Chain A, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ8|B Chain B, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ8|C Chain C, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
pdb|3BJ8|D Chain D, SpermineSPERMIDINE N1-Acetyltransferase From Mouse:
Crystal Structure Of A Ternary Complex Reveals
Solvent-Mediated Spermine Binding
Length = 171
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 1 MGDIVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAED 60
M IRPA DC I LI+ELA Y+ M D + L+ DGF GE P + VAE
Sbjct: 1 MAKFKIRPATASDCSDILRLIKELAKYEYMEDQVILTEKDLQEDGF-GEHPFYHCLVAEV 59
Query: 61 TKTN------KLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESV 108
K + +VG+ ++Y+ YD + GK LYLED V YR G G+ + +++
Sbjct: 60 PKEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNL 113
>pdb|2JEV|A Chain A, Crystal Structure Of Human Spermine,Spermidine
Acetyltransferase In Complex With A Bisubstrate Analog
(N1- Acetylspermine-S-Coa).
pdb|2JEV|B Chain B, Crystal Structure Of Human Spermine,Spermidine
Acetyltransferase In Complex With A Bisubstrate Analog
(N1- Acetylspermine-S-Coa)
Length = 174
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 1 MGDIVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAED 60
M VIRPA DC I LI+ELA Y+ M + + L DGF GE P + VAE
Sbjct: 4 MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGF-GEHPFYHCLVAEV 62
Query: 61 TKTN------KLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESV 108
K + +VG+ ++Y+ YD + GK LYLED V YR G G+ + +++
Sbjct: 63 PKEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNL 116
>pdb|2F5I|A Chain A, X-Ray Structure Of SpermidineSPERMINE N1-Acetyltransferase
(Sat) From Homo Sapiens
pdb|2F5I|B Chain B, X-Ray Structure Of SpermidineSPERMINE N1-Acetyltransferase
(Sat) From Homo Sapiens
pdb|2G3T|A Chain A, Crsytal Structure Of Human SpermidineSPERMINE N1-
Acetyltransferase (Hssat)
pdb|2G3T|B Chain B, Crsytal Structure Of Human SpermidineSPERMINE N1-
Acetyltransferase (Hssat)
Length = 179
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 1 MGDIVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAED 60
M VIRPA DC I LI+ELA Y+ M + + L DGF GE P + VAE
Sbjct: 1 MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGF-GEHPFYHCLVAEV 59
Query: 61 TKTN------KLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESV 108
K + +VG+ ++Y+ YD + GK LYLED V YR G G+ + +++
Sbjct: 60 PKEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNL 113
>pdb|2FXF|A Chain A, Human SpermidineSPERMINE N1-Acetyltransferase
pdb|2FXF|B Chain B, Human SpermidineSPERMINE N1-Acetyltransferase
Length = 170
Score = 72.0 bits (175), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 2 GDIVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAEDT 61
VIRPA DC I LI+ELA Y+ M + + L DGF GE P + VAE
Sbjct: 1 AKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGF-GEHPFYHCLVAEVP 59
Query: 62 KTN------KLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESV 108
K + +VG+ ++Y+ YD + GK LYLED V YR G G+ + +++
Sbjct: 60 KEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNL 112
>pdb|2B4D|A Chain A, Ssat+coa+sp- Sp Disordered
pdb|2B5G|A Chain A, Wild Type Ssat- 1.7a Structure
Length = 171
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 4 IVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAEDTKT 63
VIRPA DC I LI+ELA Y+ + + L DGF GE P + VAE K
Sbjct: 4 FVIRPATAADCSDILRLIKELAKYEYXEEQVILTEKDLLEDGF-GEHPFYHCLVAEVPKE 62
Query: 64 N------KLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESVVK 110
+ +VG+ +Y+ YD + GK LYLED V YR G G+ + +++ +
Sbjct: 63 HWTPEGHSIVGFAXYYFTYDPWIGKLLYLEDFFVXSDYRGFGIGSEILKNLSQ 115
>pdb|2B3U|A Chain A, Human Spermine Spermidine Acetyltransferase K26r Mutant
pdb|2B3U|B Chain B, Human Spermine Spermidine Acetyltransferase K26r Mutant
pdb|2B3V|A Chain A, Spermine Spermidine Acetyltransferase In Complex With
Acetylcoa, K26r Mutant
pdb|2B4B|A Chain A, Ssat+coa+be-3-3-3, K6r Mutant
pdb|2B4B|B Chain B, Ssat+coa+be-3-3-3, K6r Mutant
pdb|2B58|A Chain A, Ssat With Coa_sp, Spermine Disordered, K26r Mutant
Length = 171
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 4 IVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAEDTKT 63
VIRPA DC I LI+ELA Y+ + + L DGF GE P + VAE K
Sbjct: 4 FVIRPATAADCSDILRLIKELARYEYXEEQVILTEKDLLEDGF-GEHPFYHCLVAEVPKE 62
Query: 64 N------KLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESVVK 110
+ +VG+ +Y+ YD + GK LYLED V YR G G+ + +++ +
Sbjct: 63 HWTPEGHSIVGFAXYYFTYDPWIGKLLYLEDFFVXSDYRGFGIGSEILKNLSQ 115
>pdb|2B4D|B Chain B, Ssat+coa+sp- Sp Disordered
pdb|2B5G|B Chain B, Wild Type Ssat- 1.7a Structure
Length = 171
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 5 VIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAEDTKTN 64
VIRPA DC I LI+ELA Y+ + + L DGF GE P + VAE K +
Sbjct: 5 VIRPATAADCSDILRLIKELAXYEYXEEQVILTEKDLLEDGF-GEHPFYHCLVAEVPKEH 63
Query: 65 ------KLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESV 108
+VG+ +Y+ YD + GK LYLED V YR G G+ + +++
Sbjct: 64 WTPEGHSIVGFAXYYFTYDPWIGKLLYLEDFFVXSDYRGFGIGSEILKNL 113
>pdb|2FE7|A Chain A, The Crystal Structure Of A Probable N-Acetyltransferase
From Pseudomonas Aeruginosa
pdb|2FE7|B Chain B, The Crystal Structure Of A Probable N-Acetyltransferase
From Pseudomonas Aeruginosa
Length = 166
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 6 IRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGF-DGERPLFLSTVAEDTKTN 64
IRPA D QI A I ELADY++ + + R F +G L ++E
Sbjct: 13 IRPAVPADAEQILAFIIELADYERARHEVVTDVEGIRRSLFAEGSPTRALMCLSE----G 68
Query: 65 KLVGYTLFYYLYDCFEGKY-LYLEDICVTEAYRKKGFGAALFESVVK 110
+ +GY +F+Y Y + G+ +YLED+ VT YR G G L + +
Sbjct: 69 RPIGYAVFFYSYSTWLGRNGIYLEDLYVTPEYRGVGAGRRLLRELAR 115
>pdb|3DSB|A Chain A, The Crystal Structure Of A Possible Acetyltransferase From
Clostridium Difficile 630
pdb|3DSB|B Chain B, The Crystal Structure Of A Possible Acetyltransferase From
Clostridium Difficile 630
Length = 157
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 22/115 (19%)
Query: 4 IVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAEDTKT 63
I IR A+ D I LA + +G ++ DVL + G + L L D +
Sbjct: 7 IEIREARXDDLDTIAKFNYNLA---KETEGKELDXDVLTK----GVKALLL-----DERK 54
Query: 64 NKLVGYTLF----------YYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESV 108
K YT+F Y D G +L+++ + V + YR+KG LF +
Sbjct: 55 GKYHVYTVFDKVVAQIXYTYEWSDWRNGNFLWIQSVYVDKEYRRKGIFNYLFNYI 109
>pdb|4E0A|A Chain A, Crystal Structure Of The Mutant F44r Bh1408 Protein From
Bacillus Halodurans, Northeast Structural Genomics
Consortium (Nesg) Target Bhr182
pdb|4E0A|B Chain B, Crystal Structure Of The Mutant F44r Bh1408 Protein From
Bacillus Halodurans, Northeast Structural Genomics
Consortium (Nesg) Target Bhr182
Length = 164
Score = 29.6 bits (65), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 82 KYLYLEDICVTEAYRKKGFGAALFESVV 109
K +Y+ D+CV E R G G +FE+++
Sbjct: 87 KTVYISDLCVDETRRGGGIGRLIFEAII 114
>pdb|4F6A|A Chain A, High-Resolution X-Ray Structure Of The Tetramutant Of
Bh1408 Protein From Bacillus Halodurans, Northeast
Structural Genomics Consortium (Nesg) Target Bhr182
pdb|4F6A|B Chain B, High-Resolution X-Ray Structure Of The Tetramutant Of
Bh1408 Protein From Bacillus Halodurans, Northeast
Structural Genomics Consortium (Nesg) Target Bhr182
Length = 156
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 82 KYLYLEDICVTEAYRKKGFGAALFESVV 109
K +Y+ D+CV E R G G +FE+++
Sbjct: 87 KTVYISDLCVDETRRGGGIGRLIFEAII 114
>pdb|3LD2|A Chain A, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|B Chain B, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|C Chain C, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|D Chain D, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
Length = 197
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 64 NKLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFE 106
+K+VG + LY G+++ I V E R+KG G AL +
Sbjct: 90 DKIVGVLDYSSLYPFPSGQHIVTFGIAVAEKERRKGIGRALVQ 132
>pdb|2IZP|A Chain A, Bipd - An Invasion Prtein Associated With The Type-Iii
Secretion System Of Burkholderia Pseudomallei.
pdb|2IZP|B Chain B, Bipd - An Invasion Prtein Associated With The Type-Iii
Secretion System Of Burkholderia Pseudomallei.
pdb|2IXR|A Chain A, Bipd Of Burkholderia Pseudomallei
pdb|2J9T|A Chain A, Bipd Of Burkholderia Pseudomallei
pdb|2J9T|B Chain B, Bipd Of Burkholderia Pseudomallei
pdb|3NFT|A Chain A, Near-Atomic Resolution Analysis Of Bipd- A Component Of
The Type-Iii Secretion System Of Burkholderia
Pseudomallei
Length = 303
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Query: 11 KLDCGQIRALIQELADY---QQMPDGPKI 36
K+D G+I+ALIQ++ D+ Q+P G I
Sbjct: 174 KIDGGKIKALIQQVIDHLPTMQLPKGADI 202
>pdb|3MZV|A Chain A, Crystal Structure Of A Decaprenyl Diphosphate Synthase
From Rhodobacter Capsulatus
pdb|3MZV|B Chain B, Crystal Structure Of A Decaprenyl Diphosphate Synthase
From Rhodobacter Capsulatus
Length = 341
Score = 27.7 bits (60), Expect = 1.9, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 7 RPAQKL--DCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAEDTKTN 64
R AQ L D + ALI+E + P P++ A ++E G RP+ A
Sbjct: 13 RLAQALAEDMAAVNALIRERMSSEHAPRIPEVTAHLIEAGG-KRLRPMLTLAAA------ 65
Query: 65 KLVGYTLFYYLYDCFEGKYLY----LEDICVTEAYRKKG 99
+LVGY ++++ ++++ L D V E+ +++G
Sbjct: 66 RLVGYGGPFHVHLAATVEFIHTATLLHDDVVDESRQRRG 104
>pdb|4H6U|A Chain A, Tubulin Acetyltransferase Mutant
pdb|4H6U|B Chain B, Tubulin Acetyltransferase Mutant
Length = 200
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Query: 67 VGYTLFYYLYDCFEGKYLYLEDICV-----TEAYRKKGFGAALFESVVK 110
VGY + L G +L E +CV TE ++ G+G+ LF+ ++K
Sbjct: 97 VGYKKLFLLDQ--RGAHLETEPLCVLAFYVTETLQRHGYGSELFDFMLK 143
>pdb|3DMP|A Chain A, 2.6 A Crystal Structure Of Uracil
Phosphoribosyltransferase From Burkholderia Pseudomallei
pdb|3DMP|B Chain B, 2.6 A Crystal Structure Of Uracil
Phosphoribosyltransferase From Burkholderia Pseudomallei
pdb|3DMP|C Chain C, 2.6 A Crystal Structure Of Uracil
Phosphoribosyltransferase From Burkholderia Pseudomallei
pdb|3DMP|D Chain D, 2.6 A Crystal Structure Of Uracil
Phosphoribosyltransferase From Burkholderia Pseudomallei
Length = 217
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 39 DVLERDGFDGERPLFLSTVA 58
DVL+R G GER +FL+ VA
Sbjct: 150 DVLKRRGVPGERLMFLALVA 169
>pdb|3PP9|A Chain A, 1.6 Angstrom Resolution Crystal Structure Of Putative
Streptothricin Acetyltransferase From Bacillus Anthracis
Str. Ames In Complex With Acetyl Coenzyme A
pdb|3PP9|B Chain B, 1.6 Angstrom Resolution Crystal Structure Of Putative
Streptothricin Acetyltransferase From Bacillus Anthracis
Str. Ames In Complex With Acetyl Coenzyme A
pdb|3PP9|C Chain C, 1.6 Angstrom Resolution Crystal Structure Of Putative
Streptothricin Acetyltransferase From Bacillus Anthracis
Str. Ames In Complex With Acetyl Coenzyme A
Length = 187
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 64 NKLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAAL 104
N+++G+ + ++ Y Y+EDI V + YR G G L
Sbjct: 85 NQIIGFIVLKKNWN----NYAYIEDITVDKKYRTLGVGKRL 121
>pdb|3UIF|A Chain A, Crystal Structure Of Putative Sulfonate Abc Transporter,
Periplasmic Sulfonate-Binding Protein Ssua From
Methylobacillus Flagellatus Kt
Length = 348
Score = 25.8 bits (55), Expect = 6.8, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 26 DYQQMPDGPKIGADVLERDGFDGERPLFLSTVAEDTKTNKLVGYT 70
D++ + P++GA L DG LF S + ED K++ T
Sbjct: 147 DFKIVNVNPQVGAAALASGTVDGFFSLFDSYILEDRGVGKIIWST 191
>pdb|4HKF|A Chain A, Crystal Structure Of Danio Rerio Mec-17 Catalytic Domain
In Complex With Acetyl-Coa
Length = 191
Score = 25.4 bits (54), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 67 VGYTLFYYLYDCFEGKYLYLEDICV-----TEAYRKKGFGAALFESVVK 110
VGY + L G +L E +CV TE ++ G+G+ LF+ +K
Sbjct: 95 VGYKKLFLLDQ--RGAHLETEPLCVLDFYVTETLQRHGYGSELFDFXLK 141
>pdb|4H6Z|A Chain A, Tubulin Acetyltransferase
pdb|4H6Z|B Chain B, Tubulin Acetyltransferase
Length = 190
Score = 25.4 bits (54), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 67 VGYTLFYYLYDCFEGKYLYLEDICV-----TEAYRKKGFGAALFESVVK 110
VGY + L G +L E +CV TE ++ G+G+ LF+ +K
Sbjct: 97 VGYKKLFLLDQ--RGAHLETEPLCVLDFYVTETLQRHGYGSELFDFXLK 143
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.144 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,447,328
Number of Sequences: 62578
Number of extensions: 135903
Number of successful extensions: 301
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 274
Number of HSP's gapped (non-prelim): 23
length of query: 110
length of database: 14,973,337
effective HSP length: 74
effective length of query: 36
effective length of database: 10,342,565
effective search space: 372332340
effective search space used: 372332340
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)