BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy631
(110 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7PCJ9|SAT2_PIG Diamine acetyltransferase 2 OS=Sus scrofa GN=SAT2 PE=2 SV=1
Length = 170
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 71/116 (61%), Gaps = 7/116 (6%)
Query: 1 MGDIVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAE- 59
M ++IR A++ DCG I +I+ELA+Y+++ D KI + L DGF GE P F VAE
Sbjct: 1 MASVLIREAKEGDCGNILRMIRELAEYEKLSDQVKISEEALRADGF-GENPFFHCLVAEI 59
Query: 60 -----DTKTNKLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESVVK 110
+ + + +VGY L+Y++Y + G+ +YLEDI V YR +G G+ + + V +
Sbjct: 60 LPAPGEPQGSCMVGYGLYYFIYSTWTGRNIYLEDIYVKPEYRGQGIGSKIIKKVAE 115
>sp|Q6P8J2|SAT2_MOUSE Diamine acetyltransferase 2 OS=Mus musculus GN=Sat2 PE=2 SV=1
Length = 170
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 7/116 (6%)
Query: 1 MGDIVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAE- 59
M IR A++ DCG I +I+ELA+++++ KI + L DGF GE P F VAE
Sbjct: 1 MASTRIREARESDCGDIMRMIRELAEFEKLSHQVKISEEALRADGF-GENPFFHCLVAEI 59
Query: 60 -----DTKTNKLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESVVK 110
+++ + +VGY L+Y++Y + G+ +YLEDI V YR +G G + + V +
Sbjct: 60 IPAPGESQGSLVVGYGLYYFIYSTWTGRNVYLEDIYVMPQYRGQGIGTKIIKKVAE 115
>sp|Q7PCJ8|SAT2_BOVIN Diamine acetyltransferase 2 OS=Bos taurus GN=SAT2 PE=2 SV=1
Length = 170
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 70/116 (60%), Gaps = 7/116 (6%)
Query: 1 MGDIVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAE- 59
M ++IR A++ DCG I LI+ELA+Y+++ D KI + L DGF GE P + VAE
Sbjct: 1 MAFVMIREAKEGDCGNILRLIRELAEYEKLSDQVKISEEALRADGF-GETPFYHCLVAEI 59
Query: 60 -----DTKTNKLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESVVK 110
+ + +VGY L+Y+ Y ++G+ +YLEDI V YR +G G+ + + V +
Sbjct: 60 LSAPGEPQGPCVVGYGLYYFSYSTWKGRNIYLEDIYVKPEYRGQGIGSKIIKKVAE 115
>sp|Q86VE3|SATL1_HUMAN Spermidine/spermine N(1)-acetyltransferase-like protein 1 OS=Homo
sapiens GN=SATL1 PE=2 SV=3
Length = 508
Score = 80.5 bits (197), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/108 (41%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 6 IRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAEDTKTNK 65
IR A+ DC +I LI+ELA + M D ++ A L RDGF G+ PLF +AE K
Sbjct: 344 IRHAEAGDCPEILRLIKELAACENMLDAMELTAADLLRDGF-GDNPLFYCLIAEVNDQQK 402
Query: 66 -----LVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESV 108
VG+ ++Y+ YD + GK LYLED VT+AY+ G GA + + +
Sbjct: 403 PSGKLTVGFAMYYFTYDSWTGKVLYLEDFYVTQAYQGLGIGAEMLKRL 450
>sp|Q96F10|SAT2_HUMAN Diamine acetyltransferase 2 OS=Homo sapiens GN=SAT2 PE=1 SV=1
Length = 170
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 7/116 (6%)
Query: 1 MGDIVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAED 60
M + IR A++ DCG I LI+ELA+++++ D KI + L DGF G+ P + VAE
Sbjct: 1 MASVRIREAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGF-GDNPFYHCLVAEI 59
Query: 61 TKTNK------LVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESVVK 110
+VGY ++Y++Y ++G+ +YLEDI V YR +G G+ + + V +
Sbjct: 60 LPAPGKLLGPCVVGYGIYYFIYSTWKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAE 115
>sp|Q9D5N8|SATL1_MOUSE Spermidine/spermine N(1)-acetyltransferase-like protein 1 OS=Mus
musculus GN=Satl1 PE=2 SV=1
Length = 416
Score = 76.3 bits (186), Expect = 6e-14, Method: Composition-based stats.
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 6 IRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAEDTKTN- 64
IRPA+ DC I LI+ELA Y+ M + + L RDGF G+ PLF VAE
Sbjct: 252 IRPAEPEDCPDILRLIKELASYEGMEEKVSLTERDLFRDGF-GDNPLFYCLVAEAPSEQT 310
Query: 65 ----KLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESV 108
K +G+ ++Y+ YD GK L+LED +TE Y+ G GA + + +
Sbjct: 311 ESGVKTIGFAMYYFTYDPRIGKLLHLEDFYITEDYQGIGIGADMLKKL 358
>sp|P48026|SAT1_MOUSE Diamine acetyltransferase 1 OS=Mus musculus GN=Sat1 PE=1 SV=1
Length = 171
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 1 MGDIVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAED 60
M IRPA DC I LI+ELA Y+ M D + L+ DGF GE P + VAE
Sbjct: 1 MAKFKIRPATASDCSDILRLIKELAKYEYMEDQVILTEKDLQEDGF-GEHPFYHCLVAEV 59
Query: 61 TKTN------KLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESV 108
K + +VG+ ++Y+ YD + GK LYLED V YR G G+ + +++
Sbjct: 60 PKEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNL 113
>sp|P21673|SAT1_HUMAN Diamine acetyltransferase 1 OS=Homo sapiens GN=SAT1 PE=1 SV=1
Length = 171
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 1 MGDIVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAED 60
M VIRPA DC I LI+ELA Y+ M + + L DGF GE P + VAE
Sbjct: 1 MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGF-GEHPFYHCLVAEV 59
Query: 61 TKTN------KLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESV 108
K + +VG+ ++Y+ YD + GK LYLED V YR G G+ + +++
Sbjct: 60 PKEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNL 113
>sp|Q3T0Q0|SAT1_BOVIN Diamine acetyltransferase 1 OS=Bos taurus GN=SAT1 PE=2 SV=1
Length = 171
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 1 MGDIVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAED 60
M VIRPA DC I LI+ELA Y+ M + + L DGF GE P + VAE
Sbjct: 1 MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVMLTEKDLLEDGF-GEHPFYHCLVAEV 59
Query: 61 TKTN------KLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESV 108
K + +VG+ ++Y+ YD + GK LYLED V YR G G+ + + +
Sbjct: 60 PKEHLTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKKL 113
>sp|Q28999|SAT1_PIG Diamine acetyltransferase 1 OS=Sus scrofa GN=SAT1 PE=2 SV=1
Length = 171
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 1 MGDIVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAED 60
M VIRPA DC I LI+ELA Y+ M + + L DGF GE P + VAE
Sbjct: 1 MAKFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGF-GEHPFYHCLVAEV 59
Query: 61 TKTN------KLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESV 108
K + +VG+ ++Y+ YD + GK LYLED V YR G G+ + +++
Sbjct: 60 PKEHLTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNL 113
>sp|Q01612|SAT1_MESAU Diamine acetyltransferase 1 OS=Mesocricetus auratus GN=SAT1 PE=2
SV=1
Length = 171
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 1 MGDIVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAED 60
M IRPA DC I LI+ELA Y+ M D + L DGF GE P + +AE
Sbjct: 1 MAKFKIRPATASDCSDILRLIKELAKYEYMEDQVMLTEKDLLEDGF-GEHPFYHCLIAEV 59
Query: 61 TKTN------KLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESV 108
K + +VG+ ++Y+ YD + GK LYLED V YR G G+ + +++
Sbjct: 60 PKEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNL 113
>sp|Q9JHW6|SAT1_CRIGR Diamine acetyltransferase 1 OS=Cricetulus griseus GN=SAT1 PE=2 SV=1
Length = 171
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 1 MGDIVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAED 60
M IRPA DC I LI+ELA Y+ M D + L DGF GE P + +AE
Sbjct: 1 MAKFKIRPATASDCSDILRLIKELAKYEYMEDQVMLTEKDLLEDGF-GEHPFYHCLIAEV 59
Query: 61 TKTN------KLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESV 108
K + +VG+ ++Y+ YD + GK LYLED V YR G G+ + +++
Sbjct: 60 PKEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNL 113
>sp|P49431|SAT1_MUSSA Diamine acetyltransferase 1 OS=Mus saxicola GN=Sat1 PE=3 SV=1
Length = 171
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 1 MGDIVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAED 60
M IRPA DC I LI+ELA Y+ M D + L DGF GE P + VAE
Sbjct: 1 MAKFKIRPATASDCSDILRLIKELAKYEYMEDQVILTEKDLLEDGF-GEHPFYHCLVAEV 59
Query: 61 TKTN------KLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESV 108
K + +VG+ ++Y+ YD + GK LYLED V YR G G+ + +++
Sbjct: 60 PKEHWTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNL 113
>sp|Q8AXL1|SAT1_CHICK Diamine acetyltransferase 1 OS=Gallus gallus GN=SAT1 PE=2 SV=1
Length = 171
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 1 MGDIVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAE- 59
M IR A+ DC + LI+ELA Y+ M D + L DGF GE P + VAE
Sbjct: 1 MASFSIRAARPEDCSDLLRLIKELAKYEDMEDQVVLTEKELLEDGF-GEHPFYHCLVAEV 59
Query: 60 -----DTKTNKLVGYTLFYYLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESV 108
++ + +VG+ ++Y+ YD + GK LYLED V YR G G+ + +++
Sbjct: 60 PKEQWSSEGHSIVGFAMYYFTYDPWIGKLLYLEDFYVMAEYRGLGIGSEILKNL 113
>sp|Q9SMB8|THT11_TOBAC Tyramine N-feruloyltransferase 4/11 OS=Nicotiana tabacum GN=THT4
PE=2 SV=1
Length = 226
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 47 DGERPLFLSTVAEDTKTNKLV-GYTLFYYLYDCFEGKY-LYLEDICVTEAYRKKGFGAAL 104
D E F S D K + + GY FY Y CF K +Y E + E+YRK G G+ L
Sbjct: 106 DKEAEEFKSKSCGDEKEDVFIAGYAFFYANYSCFYDKAGIYFESLYFRESYRKLGMGSLL 165
Query: 105 FESVV 109
F +V
Sbjct: 166 FGTVA 170
>sp|P80969|THT10_TOBAC Tyramine N-feruloyltransferase 10/30 OS=Nicotiana tabacum GN=THT10
PE=1 SV=2
Length = 226
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 47 DGERPLFLSTVAEDTKTNKLV-GYTLFYYLYDCFEGKY-LYLEDICVTEAYRKKGFGAAL 104
D E F S D K + + GY FY Y CF K +Y E + E+YRK G G L
Sbjct: 106 DKEAEEFKSKSCGDEKEDVFIAGYAFFYANYSCFYDKAGIYFESLYFRESYRKLGMGGLL 165
Query: 105 FESVV 109
F +V
Sbjct: 166 FGTVA 170
>sp|P79081|ATS1_SCHPO N-acetyltransferase ats1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ats1 PE=2 SV=1
Length = 168
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 1 MGDIVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERD-GF-DGERPLFLSTVA 58
MG + IR K D + I+ELA++++ D + LE GF D P+
Sbjct: 1 MGSVRIRSVIKEDLPTVYQFIKELAEFEKCEDQVEATIPNLEVAFGFIDEVTPVAYGVFI 60
Query: 59 EDTKTNKLVGYTLFYYLYDCFEGKY-LYLEDICVTEAYRKKGFGAALFESVVK 110
E+ ++ G +++ + + + +YLED+ V +R KG+G+ L + +
Sbjct: 61 EEN--DQPAGMAIYFLNFSTWTSRVGIYLEDLYVRPQFRGKGYGSYLLSYLAR 111
>sp|P39979|HPA3_YEAST N-acetyltransferase HPA3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HPA3 PE=1 SV=1
Length = 179
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Query: 4 IVIRPAQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFLSTVAEDTKT 63
IV++ + D L +E +Q+ P++ R F +A DT+T
Sbjct: 32 IVVKAIEPKDEEAWNKLWKEYQGFQKTVMPPEVATTTFAR--FIDPTVKLWGALAFDTET 89
Query: 64 NKLVGYTLFY-YLYDCFEGKYLYLEDICVTEAYRKKGFGAALFESV 108
+G+ + +L + +Y+ D+ VTE R KG G L E V
Sbjct: 90 GDAIGFAHYLNHLTSWHVEEVVYMNDLYVTERARVKGVGRKLIEFV 135
>sp|Q4PBE6|HAT1_USTMA Histone acetyltransferase type B catalytic subunit OS=Ustilago
maydis (strain 521 / FGSC 9021) GN=HAT1 PE=3 SV=1
Length = 448
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 37 GADVLERDGFDGER-PLFLSTVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDICVTEAY 95
GA ++ D + E L+ +D +T +GYT Y + + + L + +
Sbjct: 187 GASYIQEDETNWEFFTLYEKVSRDDKQTWHFMGYTSLYKFWCWPDSSRIRLSQFVILPPF 246
Query: 96 RKKGFGAALFESV 108
+K+G G AL+ +V
Sbjct: 247 QKQGHGGALYTTV 259
>sp|Q9VAI0|GNA1_DROME Probable glucosamine 6-phosphate N-acetyltransferase OS=Drosophila
melanogaster GN=CG1969 PE=2 SV=1
Length = 219
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 53 FLSTVAEDTKTNKLVGYTLFY----YLYDC-FEGKYLYLEDICVTEAYRKKGFGAALFES 107
+ TV EDT+ N+++G ++++C G+ LED+ V + YR K G + +
Sbjct: 87 YFVTVIEDTRKNEIIGAASLVIERKFIHNCAVRGR---LEDVVVNDTYRGKQLGKLIVVT 143
Query: 108 V 108
V
Sbjct: 144 V 144
>sp|Q8N9M5|TM102_HUMAN Transmembrane protein 102 OS=Homo sapiens GN=TMEM102 PE=1 SV=1
Length = 508
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 16 QIRALIQELADYQQMPDGPKIGADVLERDGF 46
++ LIQEL + DGPK GAD+L F
Sbjct: 36 ELTQLIQELGVQESWSDGPKPGADLLRAKDF 66
>sp|B2TV93|RIMO_SHIB3 Ribosomal protein S12 methylthiotransferase RimO OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=rimO PE=3
SV=1
Length = 441
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF +P+
Sbjct: 164 GDLVSRPIGEVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGKPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGIWTRLHYVY-----PYPHVDDV 247
>sp|Q8Z861|RIMO_SALTI Ribosomal protein S12 methylthiotransferase RimO OS=Salmonella
typhi GN=rimO PE=3 SV=1
Length = 441
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGDVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPMKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGVWTRLHYVY-----PYPHVDDV 247
>sp|P37506|YYAR_BACSU Uncharacterized protein YyaR OS=Bacillus subtilis (strain 168)
GN=yyaR PE=4 SV=1
Length = 173
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 83 YLYLEDICVTEAYRKKGFGAALFESVVK 110
Y +EDI V + YRKKG G AL ++
Sbjct: 89 YALIEDIAVAKDYRKKGVGTALLHKAIE 116
>sp|B4TCV0|RIMO_SALHS Ribosomal protein S12 methylthiotransferase RimO OS=Salmonella
heidelberg (strain SL476) GN=rimO PE=3 SV=1
Length = 441
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGDVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGVWTRLHYVY-----PYPHVDDV 247
>sp|Q8ZQM1|RIMO_SALTY Ribosomal protein S12 methylthiotransferase RimO OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=rimO PE=3 SV=1
Length = 441
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGDVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGVWTRLHYVY-----PYPHVDDV 247
>sp|B4TQZ6|RIMO_SALSV Ribosomal protein S12 methylthiotransferase RimO OS=Salmonella
schwarzengrund (strain CVM19633) GN=rimO PE=3 SV=1
Length = 441
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGDVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGVWTRLHYVY-----PYPHVDDV 247
>sp|B5BBX8|RIMO_SALPK Ribosomal protein S12 methylthiotransferase RimO OS=Salmonella
paratyphi A (strain AKU_12601) GN=rimO PE=3 SV=1
Length = 441
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGDVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGVWTRLHYVY-----PYPHVDDV 247
>sp|Q5PGP7|RIMO_SALPA Ribosomal protein S12 methylthiotransferase RimO OS=Salmonella
paratyphi A (strain ATCC 9150 / SARB42) GN=rimO PE=3
SV=1
Length = 441
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGDVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGVWTRLHYVY-----PYPHVDDV 247
>sp|B4T0B2|RIMO_SALNS Ribosomal protein S12 methylthiotransferase RimO OS=Salmonella
newport (strain SL254) GN=rimO PE=3 SV=1
Length = 441
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGDVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGVWTRLHYVY-----PYPHVDDV 247
>sp|B5QXV6|RIMO_SALEP Ribosomal protein S12 methylthiotransferase RimO OS=Salmonella
enteritidis PT4 (strain P125109) GN=rimO PE=3 SV=1
Length = 441
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGDVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGVWTRLHYVY-----PYPHVDDV 247
>sp|B5FPB9|RIMO_SALDC Ribosomal protein S12 methylthiotransferase RimO OS=Salmonella
dublin (strain CT_02021853) GN=rimO PE=3 SV=1
Length = 441
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGDVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGVWTRLHYVY-----PYPHVDDV 247
>sp|Q57RA8|RIMO_SALCH Ribosomal protein S12 methylthiotransferase RimO OS=Salmonella
choleraesuis (strain SC-B67) GN=rimO PE=3 SV=1
Length = 441
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGDVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGVWTRLHYVY-----PYPHVDDV 247
>sp|B5F0X7|RIMO_SALA4 Ribosomal protein S12 methylthiotransferase RimO OS=Salmonella
agona (strain SL483) GN=rimO PE=3 SV=1
Length = 441
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGDVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGVWTRLHYVY-----PYPHVDDV 247
>sp|A9MSQ9|RIMO_SALPB Ribosomal protein S12 methylthiotransferase RimO OS=Salmonella
paratyphi B (strain ATCC BAA-1250 / SPB7) GN=rimO PE=3
SV=1
Length = 441
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGDVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGVWTRLHYVY-----PYPHVDDV 247
>sp|Q83LT1|RIMO_SHIFL Ribosomal protein S12 methylthiotransferase RimO OS=Shigella
flexneri GN=rimO PE=3 SV=1
Length = 441
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGEVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGIWTRLHYVY-----PYPHVDDV 247
>sp|B5R840|RIMO_SALG2 Ribosomal protein S12 methylthiotransferase RimO OS=Salmonella
gallinarum (strain 287/91 / NCTC 13346) GN=rimO PE=3
SV=1
Length = 441
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGDVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGVWTRLHYVY-----PYPHVDDV 247
>sp|Q3Z3U9|RIMO_SHISS Ribosomal protein S12 methylthiotransferase RimO OS=Shigella sonnei
(strain Ss046) GN=rimO PE=3 SV=1
Length = 441
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGEVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGIWTRLHYVY-----PYPHVDDV 247
>sp|Q0T6C8|RIMO_SHIF8 Ribosomal protein S12 methylthiotransferase RimO OS=Shigella
flexneri serotype 5b (strain 8401) GN=rimO PE=3 SV=1
Length = 441
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGEVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGIWTRLHYVY-----PYPHVDDV 247
>sp|Q1RE90|RIMO_ECOUT Ribosomal protein S12 methylthiotransferase RimO OS=Escherichia
coli (strain UTI89 / UPEC) GN=rimO PE=3 SV=1
Length = 441
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGEVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGIWTRLHYVY-----PYPHVDDV 247
>sp|Q8FJK5|RIMO_ECOL6 Ribosomal protein S12 methylthiotransferase RimO OS=Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=rimO
PE=3 SV=1
Length = 441
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGEVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGIWTRLHYVY-----PYPHVDDV 247
>sp|Q0TJL3|RIMO_ECOL5 Ribosomal protein S12 methylthiotransferase RimO OS=Escherichia
coli O6:K15:H31 (strain 536 / UPEC) GN=rimO PE=3 SV=1
Length = 441
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGEVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGIWTRLHYVY-----PYPHVDDV 247
>sp|A1A974|RIMO_ECOK1 Ribosomal protein S12 methylthiotransferase RimO OS=Escherichia
coli O1:K1 / APEC GN=rimO PE=3 SV=1
Length = 441
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGEVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGIWTRLHYVY-----PYPHVDDV 247
>sp|B7MQT8|RIMO_ECO81 Ribosomal protein S12 methylthiotransferase RimO OS=Escherichia
coli O81 (strain ED1a) GN=rimO PE=3 SV=1
Length = 441
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGEVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGIWTRLHYVY-----PYPHVDDV 247
>sp|B7MGU2|RIMO_ECO45 Ribosomal protein S12 methylthiotransferase RimO OS=Escherichia
coli O45:K1 (strain S88 / ExPEC) GN=rimO PE=3 SV=1
Length = 441
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGEVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGIWTRLHYVY-----PYPHVDDV 247
>sp|Q323V7|RIMO_SHIBS Ribosomal protein S12 methylthiotransferase RimO OS=Shigella boydii
serotype 4 (strain Sb227) GN=rimO PE=3 SV=1
Length = 441
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGEVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGIWTRLHYVY-----PYPHVDDV 247
>sp|B1LMD0|RIMO_ECOSM Ribosomal protein S12 methylthiotransferase RimO OS=Escherichia
coli (strain SMS-3-5 / SECEC) GN=rimO PE=3 SV=1
Length = 441
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGEVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGIWTRLHYVY-----PYPHVDDV 247
>sp|B6I8F5|RIMO_ECOSE Ribosomal protein S12 methylthiotransferase RimO OS=Escherichia
coli (strain SE11) GN=rimO PE=3 SV=1
Length = 441
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGEVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGIWTRLHYVY-----PYPHVDDV 247
>sp|B7NAI1|RIMO_ECOLU Ribosomal protein S12 methylthiotransferase RimO OS=Escherichia
coli O17:K52:H18 (strain UMN026 / ExPEC) GN=rimO PE=3
SV=1
Length = 441
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGEVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGIWTRLHYVY-----PYPHVDDV 247
>sp|P0AEI4|RIMO_ECOLI Ribosomal protein S12 methylthiotransferase RimO OS=Escherichia
coli (strain K12) GN=rimO PE=1 SV=1
Length = 441
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 2 GDIVIRP-------AQKLDCGQIRALIQELADYQQMPDGPKIGADVLERDGFDGERPLFL 54
GD+V RP A++L + A ++E+ Q D G DV R GF P+
Sbjct: 164 GDLVSRPIGEVLSEAKRL----VDAGVKEILVISQ--DTSAYGVDVKHRTGFHNGEPVKT 217
Query: 55 STVAEDTKTNKLVGYTLFYYLYDCFEGKYLYLEDI 89
S V+ + +KL +T +Y+Y Y +++D+
Sbjct: 218 SMVSLCEQLSKLGIWTRLHYVY-----PYPHVDDV 247
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.144 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,857,796
Number of Sequences: 539616
Number of extensions: 1718682
Number of successful extensions: 3421
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 3386
Number of HSP's gapped (non-prelim): 63
length of query: 110
length of database: 191,569,459
effective HSP length: 78
effective length of query: 32
effective length of database: 149,479,411
effective search space: 4783341152
effective search space used: 4783341152
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)