BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6316
(259 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O60841|IF2P_HUMAN Eukaryotic translation initiation factor 5B OS=Homo sapiens
GN=EIF5B PE=1 SV=4
Length = 1220
Score = 236 bits (603), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 116/161 (72%), Positives = 131/161 (81%), Gaps = 5/161 (3%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+RA I+CVLGHVDTGKTKILDKLR T+VQDGEAGGITQQIGATNVP +AI E TK ++
Sbjct: 629 LRAPIICVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKNF 688
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
E + IPG+LIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESIN+
Sbjct: 689 DRE-----NVRIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINL 743
Query: 142 LKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQ 182
LKSKK PF+VALNKIDRLY+W DV +K Q+ + +
Sbjct: 744 LKSKKCPFIVALNKIDRLYDWKKSPDSDVAATLKKQKKNTK 784
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 70/76 (92%)
Query: 184 HKTVESARKGQEICIKIEPIPGEAPKMFGRHFDENDFLVSKISRQSIDACKDYFRDDLQK 243
HK V+ A+KGQE+C+KIEPIPGE+PKMFGRHF+ D LVSKISRQSIDA KD+FRD++QK
Sbjct: 1145 HKQVDVAKKGQEVCVKIEPIPGESPKMFGRHFEATDILVSKISRQSIDALKDWFRDEMQK 1204
Query: 244 TDWQLMVDLKKVFQIL 259
+DWQL+V+LKKVF+I+
Sbjct: 1205 SDWQLIVELKKVFEII 1220
>sp|Q05D44|IF2P_MOUSE Eukaryotic translation initiation factor 5B OS=Mus musculus
GN=Eif5b PE=1 SV=2
Length = 1216
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/161 (72%), Positives = 131/161 (81%), Gaps = 5/161 (3%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+RA I+CVLGHVDTGKTKILDKLR T+VQDGEAGGITQQIGATNVP +AI E TK ++
Sbjct: 625 LRAPIICVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKNF 684
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
E + IPG+LIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI
Sbjct: 685 DRE-----NVRIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 739
Query: 142 LKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQ 182
LKSKK PF+VALNKIDRLY+W DV +K Q+ + +
Sbjct: 740 LKSKKCPFIVALNKIDRLYDWKKSPDSDVAVTLKKQKKNTK 780
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 70/76 (92%)
Query: 184 HKTVESARKGQEICIKIEPIPGEAPKMFGRHFDENDFLVSKISRQSIDACKDYFRDDLQK 243
HK V+ A+KGQE+C+KIEPIPGE+PKMFGRHF+ D LVSKISRQSIDA KD+FRD++QK
Sbjct: 1141 HKQVDVAKKGQEVCVKIEPIPGESPKMFGRHFEATDILVSKISRQSIDALKDWFRDEMQK 1200
Query: 244 TDWQLMVDLKKVFQIL 259
+DWQL+V+LKKVF+I+
Sbjct: 1201 SDWQLIVELKKVFEII 1216
>sp|B2GUV7|IF2P_RAT Eukaryotic translation initiation factor 5B OS=Rattus norvegicus
GN=Eif5b PE=1 SV=1
Length = 1216
Score = 236 bits (601), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/161 (72%), Positives = 131/161 (81%), Gaps = 5/161 (3%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+RA I+CVLGHVDTGKTKILDKLR T+VQDGEAGGITQQIGATNVP +AI E TK ++
Sbjct: 625 LRAPIICVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKNF 684
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
E + IPG+LIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI
Sbjct: 685 DRE-----NVRIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 739
Query: 142 LKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQ 182
LKSKK PF+VALNKIDRLY+W DV +K Q+ + +
Sbjct: 740 LKSKKCPFIVALNKIDRLYDWKKSPDSDVAVTLKKQKKNTK 780
Score = 132 bits (331), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 70/76 (92%)
Query: 184 HKTVESARKGQEICIKIEPIPGEAPKMFGRHFDENDFLVSKISRQSIDACKDYFRDDLQK 243
HK V+ A+KGQE+C+KIEPIPGE+PKMFGRHF+ D LVSKISRQSIDA KD+FRD++QK
Sbjct: 1141 HKQVDVAKKGQEVCVKIEPIPGESPKMFGRHFEATDILVSKISRQSIDALKDWFRDEMQK 1200
Query: 244 TDWQLMVDLKKVFQIL 259
+DWQL+V+LKKVF+I+
Sbjct: 1201 SDWQLIVELKKVFEII 1216
>sp|Q5RDE1|IF2P_PONAB Eukaryotic translation initiation factor 5B OS=Pongo abelii
GN=EIF5B PE=2 SV=2
Length = 1220
Score = 221 bits (564), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 126/161 (78%), Gaps = 5/161 (3%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+RA I+CVLGHVDTGKTKILDKLR T+VQDGEAGGITQQIGATNVP +AI E TK ++
Sbjct: 629 LRAPIICVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKNF 688
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
G E + IPG+LIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHG EPQ ++ N+
Sbjct: 689 GRE-----NVRIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGGEPQKMKPTNL 743
Query: 142 LKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQ 182
K KK PF+VALNKIDRLY+W DV +K Q+ + +
Sbjct: 744 PKPKKCPFMVALNKIDRLYDWKKSPDSDVAATLKKQKKNTK 784
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 70/76 (92%)
Query: 184 HKTVESARKGQEICIKIEPIPGEAPKMFGRHFDENDFLVSKISRQSIDACKDYFRDDLQK 243
HK V+ A+KGQE+C+KIEPIPGE+PKMFGRHF+ D LVSKISRQSIDA KD+FRD++QK
Sbjct: 1145 HKQVDVAKKGQEVCVKIEPIPGESPKMFGRHFEATDILVSKISRQSIDALKDWFRDEMQK 1204
Query: 244 TDWQLMVDLKKVFQIL 259
+DWQL+V+LKKVF+I+
Sbjct: 1205 SDWQLIVELKKVFEII 1220
>sp|Q10251|IF2P_SCHPO Eukaryotic translation initiation factor 5B OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC56F8.03 PE=1 SV=1
Length = 1079
Score = 217 bits (553), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 102/164 (62%), Positives = 131/164 (79%), Gaps = 5/164 (3%)
Query: 19 ENFMRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHV 78
E+ +R+ I C+LGHVDTGKTK+LD LRR+NVQ+GEAGGITQQIGAT P ++I++ TK V
Sbjct: 479 ESDLRSPICCILGHVDTGKTKLLDNLRRSNVQEGEAGGITQQIGATYFPIESIKQKTKVV 538
Query: 79 RGPGGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIES 138
G IPGLLIIDTPGHESF+NLR+RG+SLC+IAILV+DIMHGLEPQTIES
Sbjct: 539 NKKG-----KLQYNIPGLLIIDTPGHESFTNLRSRGTSLCNIAILVIDIMHGLEPQTIES 593
Query: 139 INILKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQ 182
I +L+ +KTPFVVALNK+DRLY W+++ ++D + Q+ ++Q
Sbjct: 594 IRLLRDQKTPFVVALNKVDRLYGWHSIKDNAIQDSLSKQKKAIQ 637
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 6/80 (7%)
Query: 184 HKTVESARKGQE---ICIKIEPIPGEAPKMFGRHFDENDFLVSKISRQSIDACKD-YFRD 239
HK V+ +KGQ + +K+E + +FGR E+D L S I+RQSID+ KD FRD
Sbjct: 1002 HKPVDKVKKGQAGAGVAMKLESSGSQI--LFGRQVTESDALYSHITRQSIDSLKDPAFRD 1059
Query: 240 DLQKTDWQLMVDLKKVFQIL 259
++ + +WQL++ LKK+F I+
Sbjct: 1060 EVSRDEWQLIIQLKKLFGII 1079
>sp|P39730|IF2P_YEAST Eukaryotic translation initiation factor 5B OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=FUN12 PE=1
SV=2
Length = 1002
Score = 213 bits (541), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/161 (63%), Positives = 123/161 (76%), Gaps = 5/161 (3%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R+ I C+LGHVDTGKTK+LDK+R+TNVQ GEAGGITQQIGAT P DAI+ TK +
Sbjct: 403 LRSPICCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEY 462
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
+ ++PGLL+IDTPGHESFSNLR+RGSSLC+IAILV+DIMHGLE QTIESI +
Sbjct: 463 EKQT-----FDVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKL 517
Query: 142 LKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQ 182
L+ +K PFVVALNKIDRLY+W + RD Q +VQ
Sbjct: 518 LRDRKAPFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQ 558
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 184 HKTVESARKGQE---ICIKIEPIPGEAPKMFGRHFDENDFLVSKISRQSIDACKD-YFRD 239
H+ V+ +KGQ + +++E G+ P ++GRH DEND L S +SR+SID KD FRD
Sbjct: 924 HQPVQEVKKGQTAAGVAVRLEDPSGQQP-IWGRHVDENDTLYSLVSRRSIDTLKDKAFRD 982
Query: 240 DLQKTDWQLMVDLKKVFQI 258
+ ++DW L+ LK VF I
Sbjct: 983 QVARSDWLLLKKLKVVFGI 1001
>sp|Q54XP6|IF2P_DICDI Eukaryotic translation initiation factor 5B OS=Dictyostelium
discoideum GN=eif5b PE=3 SV=1
Length = 1045
Score = 201 bits (511), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 128/179 (71%), Gaps = 10/179 (5%)
Query: 23 RAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGPG 82
R+ I+C+LGHVDTGKT +LDK+R TNVQ GEA GITQQIGA+ +P DAI+E TK
Sbjct: 459 RSPIICILGHVDTGKTSLLDKIRNTNVQGGEARGITQQIGASFIPVDAIKEQTKSFAEKI 518
Query: 83 GEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINIL 142
++PGLL+IDTPGHESF+NLR+RGS LCD+AILV+DIMHGL+ QT+ESIN+L
Sbjct: 519 K-----MDFKLPGLLLIDTPGHESFNNLRSRGSGLCDLAILVIDIMHGLQAQTLESINLL 573
Query: 143 KSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQTH-----KTVESARKGQEI 196
+ +KTPF+VALNK+DR+Y+W D ++ K Q S K + +A GQE+
Sbjct: 574 RMRKTPFIVALNKVDRIYDWKPCVNTDFKEAYKIQSKSAAQEFDYKVKDIIAALAGQEL 632
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 213 RHFDENDFLVSKISRQSIDACKDYFRDDLQKTDWQLMVDLKKVFQI 258
RHFD+ +SKI+R+S+DA K+ + +DL K D QL+ +K V++I
Sbjct: 999 RHFDDKKQWMSKITRESLDALKEGWSEDLTKQDIQLLKFMKTVYKI 1044
>sp|A6VIS4|IF2P_METM7 Probable translation initiation factor IF-2 OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=infB PE=3
SV=1
Length = 598
Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/143 (58%), Positives = 105/143 (73%), Gaps = 5/143 (3%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R IV VLGHVD GKT +LDK+RRT V EAGGITQ IGA+ +P + I++ +K + G
Sbjct: 3 LRCPIVSVLGHVDHGKTSLLDKIRRTRVTQREAGGITQHIGASEIPINTIKKVSKDLLGL 62
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
L IPG+L+IDTPGHE+F++LR RG +L DIAILVVDI G +PQTIE+INI
Sbjct: 63 F-----KADLSIPGILVIDTPGHEAFTSLRKRGGALADIAILVVDINEGFKPQTIEAINI 117
Query: 142 LKSKKTPFVVALNKIDRLYNWNT 164
LK KTPFVVA NK+DR+ WN+
Sbjct: 118 LKQCKTPFVVAANKVDRIPGWNS 140
>sp|Q6M0I6|IF2P_METMP Probable translation initiation factor IF-2 OS=Methanococcus
maripaludis (strain S2 / LL) GN=infB PE=3 SV=1
Length = 598
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/143 (58%), Positives = 105/143 (73%), Gaps = 5/143 (3%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R IV VLGHVD GKT +LDK+RRT V EAGGITQ IGA+ +P + I++ +K + G
Sbjct: 3 LRCPIVSVLGHVDHGKTSLLDKIRRTRVTQREAGGITQHIGASEIPINTIKKVSKDLLGL 62
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
L IPG+L+IDTPGHE+F++LR RG +L DIAILVVDI G +PQTIE+INI
Sbjct: 63 F-----KADLSIPGILVIDTPGHEAFTSLRKRGGALADIAILVVDINEGFKPQTIEAINI 117
Query: 142 LKSKKTPFVVALNKIDRLYNWNT 164
LK KTPFVVA NK+DR+ WN+
Sbjct: 118 LKQCKTPFVVAANKVDRIPGWNS 140
>sp|A4FZQ3|IF2P_METM5 Probable translation initiation factor IF-2 OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=infB PE=3
SV=1
Length = 598
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/143 (58%), Positives = 105/143 (73%), Gaps = 5/143 (3%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R IV VLGHVD GKT +LDK+RRT V EAGGITQ IGA+ +P + I++ +K + G
Sbjct: 3 LRCPIVSVLGHVDHGKTSLLDKIRRTRVTQREAGGITQHIGASEIPINTIKKVSKDLLGL 62
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
L IPG+L+IDTPGHE+F++LR RG +L DIAILVVDI G +PQTIE+INI
Sbjct: 63 F-----KADLSIPGILVIDTPGHEAFTSLRKRGGALADIAILVVDINEGFKPQTIEAINI 117
Query: 142 LKSKKTPFVVALNKIDRLYNWNT 164
LK KTPF+VA NK+DR+ WN+
Sbjct: 118 LKQCKTPFIVAANKVDRIPGWNS 140
>sp|A6URS1|IF2P_METVS Probable translation initiation factor IF-2 OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=infB
PE=3 SV=1
Length = 598
Score = 167 bits (422), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/145 (57%), Positives = 105/145 (72%), Gaps = 5/145 (3%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R IV VLGHVD GKT +LDK+R T V EAGGITQ IGA+ +P + I++ +K + G
Sbjct: 3 LRCPIVSVLGHVDHGKTSLLDKIRSTRVTQREAGGITQHIGASEIPINTIKKVSKDLLGL 62
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
L IPGLL+IDTPGHE+F++LR RG +L DIAILVVDI G +PQTIE+INI
Sbjct: 63 FN-----ANLSIPGLLVIDTPGHEAFTSLRKRGGALADIAILVVDINEGFKPQTIEAINI 117
Query: 142 LKSKKTPFVVALNKIDRLYNWNTMN 166
LK KTPFVVA NK+DR+ W++ N
Sbjct: 118 LKQCKTPFVVAANKLDRIPGWSSSN 142
>sp|Q0W8X2|IF2P_UNCMA Probable translation initiation factor IF-2 OS=Uncultured
methanogenic archaeon RC-I GN=infB PE=3 SV=1
Length = 594
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 105/161 (65%), Gaps = 8/161 (4%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R IVCV+GHVD GKT +LD++R T V D EAG ITQ IGAT VP I+ K + G
Sbjct: 11 LRTPIVCVMGHVDHGKTSLLDRIRGTAVVDKEAGAITQHIGATEVPLQTIQTLCKGMIG- 69
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
G + +PGLL IDTPGH +F+NLR+RG +L D+A+LVVDI G +PQT+E+I I
Sbjct: 70 -------GNIVVPGLLFIDTPGHHAFTNLRSRGGALADLAVLVVDINEGFQPQTVEAIKI 122
Query: 142 LKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQ 182
LK KTPFV+A NKIDR++ W N SQ V+
Sbjct: 123 LKQFKTPFVIAANKIDRIHGWTAKNNSPFLQTFNSQPDHVK 163
>sp|B6YWH3|IF2P_THEON Probable translation initiation factor IF-2 OS=Thermococcus
onnurineus (strain NA1) GN=infB PE=3 SV=1
Length = 597
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 109/161 (67%), Gaps = 5/161 (3%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R I+ VLGHVD GKT +LD++RRTNV EAGGITQ IGAT VP E K++ GP
Sbjct: 4 IRQPIIAVLGHVDHGKTTLLDRIRRTNVAGKEAGGITQHIGATEVPI----ETVKNLAGP 59
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
++ G +++PGLL IDTPGHE+F++LR RG SL D+A+LVVDI G +PQTIESI I
Sbjct: 60 LIKLW-KGEIKLPGLLFIDTPGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEI 118
Query: 142 LKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQ 182
L+ +TPF+VA NKIDR+ W IK Q+ Q
Sbjct: 119 LRKNRTPFIVAANKIDRIKGWKIEKDEPFLVNIKKQDQRAQ 159
>sp|A0B8Q6|IF2P_METTP Probable translation initiation factor IF-2 OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=infB PE=3 SV=1
Length = 602
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 127/216 (58%), Gaps = 22/216 (10%)
Query: 5 FNKRREKIEENPEDENFMRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGAT 64
+R +K + E+ + +R IVCV+GHVD GKT +LD++R T V EAG ITQ IGAT
Sbjct: 1 MRQRSKKGMRSKEEVSQLRTPIVCVMGHVDHGKTTLLDRIRGTTVAQYEAGAITQHIGAT 60
Query: 65 NVPADAIRENTKHVRGPGGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILV 124
+P I++ G L +PGLL IDTPGH +F++LR+RG SL D+AIL+
Sbjct: 61 EIPLSVIQQFCGS--------GFKANLMVPGLLFIDTPGHHAFTSLRSRGGSLADLAILI 112
Query: 125 VDIMHGLEPQTIESINILKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQTH 184
VDI G +PQTIESINILK KTPFVVA NKIDR+ W R V + + + QT
Sbjct: 113 VDINEGFQPQTIESINILKRFKTPFVVAANKIDRIPGW-----RPVENAPMEKSLAGQTE 167
Query: 185 KTVESARKGQEICIKIEPIPGEAPKMFGRHFDENDF 220
+ VE+ KI + GE ++ FD N +
Sbjct: 168 RVVETLET------KIYELVGE---LYKYGFDSNRY 194
>sp|Q5UXU6|IF2P_HALMA Probable translation initiation factor IF-2 OS=Haloarcula
marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 /
VKM B-1809) GN=infB PE=3 SV=1
Length = 601
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R IV VLGHVD GKT +LDK+R + V GE+G ITQ IGAT VP D I E
Sbjct: 14 LRTPIVAVLGHVDHGKTSLLDKIRGSAVTAGESGAITQHIGATAVPLDVISE-------I 66
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
G++ P ++PGLL IDTPGH SFS LR+RG +L DIAILVVD+ G +PQT+E+I+I
Sbjct: 67 AGDLVDPTDFDLPGLLFIDTPGHHSFSTLRSRGGALADIAILVVDVNDGFQPQTLEAIDI 126
Query: 142 LKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQT 183
LK +TPF+VA NKID + WN + V+ + +Q VQ+
Sbjct: 127 LKRTQTPFIVAANKIDTVPGWNPNEGQPVQQTMDAQSDRVQS 168
>sp|A9A813|IF2P_METM6 Probable translation initiation factor IF-2 OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=infB PE=3
SV=1
Length = 598
Score = 165 bits (418), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/143 (57%), Positives = 104/143 (72%), Gaps = 5/143 (3%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R IV VLGHVD GKT +LDK+R T V EAGGITQ IGA+ +P + I++ +K + G
Sbjct: 3 LRCPIVSVLGHVDHGKTSLLDKIRSTRVTQREAGGITQHIGASEIPINTIKKVSKDLLGL 62
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
L IPGLL+IDTPGHE+F++LR RG +L DIAILVVD+ G +PQTIE+INI
Sbjct: 63 F-----KADLTIPGLLVIDTPGHEAFTSLRKRGGALADIAILVVDMNEGFKPQTIEAINI 117
Query: 142 LKSKKTPFVVALNKIDRLYNWNT 164
LK KTPF+VA NK+DR+ WN+
Sbjct: 118 LKQCKTPFIVAANKLDRVPGWNS 140
>sp|C6A1V3|IF2P_THESM Probable translation initiation factor IF-2 OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=infB PE=3 SV=1
Length = 597
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%), Gaps = 5/161 (3%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R I+ VLGHVD GKT +LD++R T+V + EAGGITQ IGAT VP D + K + GP
Sbjct: 4 IRQPIIAVLGHVDHGKTSLLDRIRNTHVAEKEAGGITQHIGATEVPIDVV----KQLAGP 59
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
+ G +++PGLL IDTPGHE+F++LR RG SL D+AIL++D+ G +PQT+ESI I
Sbjct: 60 LLSLW-KGEIKLPGLLFIDTPGHEAFTSLRARGGSLADLAILIIDVNEGFQPQTLESIEI 118
Query: 142 LKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQ 182
L+ KTPFVVA NKIDR+ W + IK Q+ Q
Sbjct: 119 LRKYKTPFVVAANKIDRIKGWKVVENEPFLVNIKKQDQRAQ 159
>sp|A6UVG0|IF2P_META3 Probable translation initiation factor IF-2 OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=infB PE=3
SV=1
Length = 598
Score = 164 bits (414), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/145 (55%), Positives = 105/145 (72%), Gaps = 5/145 (3%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R IV VLGHVD GKT +LDK+R+T V EAGGITQ IGA+ +P D I++ +K +
Sbjct: 3 LRCPIVSVLGHVDHGKTSLLDKIRKTRVTQREAGGITQHIGASEIPIDIIKKISKDLIKM 62
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
G L IPG+L+IDTPGH +F++LR RG +L DIA+L+VDI G PQTIE++NI
Sbjct: 63 LG-----ANLTIPGILVIDTPGHAAFTSLRKRGGALADIAVLIVDINEGFMPQTIEALNI 117
Query: 142 LKSKKTPFVVALNKIDRLYNWNTMN 166
LK KTPFVVA NKIDRL W++++
Sbjct: 118 LKQNKTPFVVAANKIDRLPGWSSVD 142
>sp|Q9Y9B3|IF2P_AERPE Probable translation initiation factor IF-2 OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138
/ K1) GN=infB PE=3 SV=1
Length = 617
Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 112/170 (65%), Gaps = 16/170 (9%)
Query: 19 ENFMRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHV 78
E +R IV VLGHVD GKT +LDK+RRT V EAGGITQ IGA+ VPAD I + + +
Sbjct: 11 ERRLRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPL 70
Query: 79 RGPGGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIES 138
+ P L IPGLL IDTPGHE FSNLR RG S+ D AILVVDIM G +PQT E+
Sbjct: 71 KKVI-----PVKLVIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEA 125
Query: 139 INILKSKKTPFVVALNKIDRLYNWN---------TMNRRD--VRDIIKSQ 177
+ +LK ++ PF++A NKIDR+ W T+ R+D VR+I++ +
Sbjct: 126 LELLKERRVPFLIAANKIDRIPGWKPNPDAPFIETIRRQDPKVREILEQR 175
>sp|A4YCQ5|IF2P_METS5 Probable translation initiation factor IF-2 OS=Metallosphaera
sedula (strain ATCC 51363 / DSM 5348) GN=infB PE=3 SV=1
Length = 597
Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 105/161 (65%), Gaps = 5/161 (3%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R IV VLGHVD GKT +LDK+R T V E G +TQ++GA+ VP+ I + + ++G
Sbjct: 8 LRQPIVVVLGHVDHGKTTLLDKIRGTAVVKKEPGEMTQEVGASFVPSSVIEKVAQPLKGI 67
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
P LEIPGLL IDTPGHE FSNLR RG S+ DIAILVVDI G + QTIESI I
Sbjct: 68 I-----PVKLEIPGLLFIDTPGHELFSNLRRRGGSVADIAILVVDITEGFQKQTIESIEI 122
Query: 142 LKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQ 182
LK KK PF+VA NKIDR+ W + +SQ SVQ
Sbjct: 123 LKDKKVPFLVAANKIDRIPGWRPIENETFTKSFRSQSQSVQ 163
>sp|Q12Z93|IF2P_METBU Probable translation initiation factor IF-2 OS=Methanococcoides
burtonii (strain DSM 6242) GN=infB PE=3 SV=1
Length = 591
Score = 161 bits (408), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/145 (54%), Positives = 101/145 (69%), Gaps = 13/145 (8%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R IVCV+GHVD GKT +LD +R + V GEAG ITQ IGAT VP AI E
Sbjct: 7 LRTPIVCVMGHVDHGKTSLLDMIRGSAVVSGEAGAITQHIGATEVPISAIVE-------- 58
Query: 82 GGEVGGPGPLE---IPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIES 138
+ G PG L+ +PGLL IDTPGH +F+ LR+RG +L D+A+++VDI G +PQTIES
Sbjct: 59 --KCGNPGLLDKFMVPGLLFIDTPGHHAFTTLRSRGGALADLAVVIVDINEGFKPQTIES 116
Query: 139 INILKSKKTPFVVALNKIDRLYNWN 163
+NIL+ KTPFVV NKID+++ WN
Sbjct: 117 LNILQQHKTPFVVVANKIDKIHGWN 141
>sp|Q976A1|IF2P_SULTO Probable translation initiation factor IF-2 OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=infB
PE=3 SV=1
Length = 602
Score = 161 bits (407), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 107/163 (65%), Gaps = 5/163 (3%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R IV VLGHVD GKT +LDK+R T V E G +TQ++GA+ VP I + + ++
Sbjct: 10 LRQPIVVVLGHVDHGKTTLLDKIRGTAVVKKEPGEMTQEVGASFVPTSVIEKIAEPLKKT 69
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
P LEIPGLL IDTPGHE FSNLR RG S+ DIAILVVD++ G + QT ES+ I
Sbjct: 70 F-----PIKLEIPGLLFIDTPGHELFSNLRRRGGSVADIAILVVDVVEGFQKQTYESLEI 124
Query: 142 LKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQTH 184
L+S+K PF+VA NKIDR+ W ++ + IKSQ VQT
Sbjct: 125 LRSRKVPFLVAANKIDRIPGWKPIDTYSFLESIKSQRKDVQTQ 167
>sp|P95691|IF2P_SULAC Probable translation initiation factor IF-2 OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=infB PE=3 SV=2
Length = 602
Score = 161 bits (407), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 107/161 (66%), Gaps = 5/161 (3%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R IV VLGHVD GKT +LDK+R T V E G +TQ++GA+ VP I + ++ ++
Sbjct: 9 LRQPIVVVLGHVDHGKTTLLDKIRGTAVVKKEPGEMTQEVGASFVPTSVIEKISEPLKK- 67
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
P LEIPGLL IDTPGHE FSNLR RG S+ DIAILVVDI+ G++ QT+ESI I
Sbjct: 68 ----SFPIKLEIPGLLFIDTPGHELFSNLRKRGGSVADIAILVVDIVEGIQKQTLESIEI 123
Query: 142 LKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQ 182
LKS+K PF+VA NKIDR+ W + + I QE V+
Sbjct: 124 LKSRKVPFIVAANKIDRINGWKAQDTYSFLESINKQEQRVR 164
>sp|A3DMS0|IF2P_STAMF Probable translation initiation factor IF-2 OS=Staphylothermus
marinus (strain ATCC 43588 / DSM 3639 / F1) GN=infB PE=3
SV=1
Length = 606
Score = 160 bits (405), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 108/163 (66%), Gaps = 4/163 (2%)
Query: 19 ENFMRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHV 78
++++R IV VLGHVD GKT +LDK+R T V E G ITQ +GA+ VPA +R+ V
Sbjct: 8 KSWIRQPIVVVLGHVDHGKTTLLDKIRGTAVAKKEPGEITQHVGASIVPASVLRK----V 63
Query: 79 RGPGGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIES 138
P + +EIPGLL +DTPGHE FSNLR RG S+ DIAILVVDIM G +PQT ES
Sbjct: 64 AEPLKKYFPKLKIEIPGLLFVDTPGHELFSNLRRRGGSVADIAILVVDIMEGFQPQTWES 123
Query: 139 INILKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSV 181
I ILK +K PF+VA NKIDR+ W + + + I+ Q+ +
Sbjct: 124 IQILKERKVPFIVAANKIDRIPGWKPNHDQPFLETIRKQDPRI 166
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 186 TVESARKGQEICIKIEPIPGEAPKMFGRHFDENDFLVSKISRQSIDACKDYFRDDLQKTD 245
++ AR GQ + I I + GRH DE D L + I +Q + ++++L +D
Sbjct: 528 VLKEARAGQSVAISIR-----GRILVGRHVDEGDILYTDIPKQHVHLWLTKYKNEL--SD 580
Query: 246 WQLMVDLKKVFQI 258
+ MV LK++ +I
Sbjct: 581 DEKMV-LKEIIEI 592
>sp|B9LQL7|IF2P_HALLT Probable translation initiation factor IF-2 OS=Halorubrum
lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 /
ACAM 34) GN=infB PE=3 SV=1
Length = 597
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 106/162 (65%), Gaps = 7/162 (4%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R IV VLGHVD GKT +LD +R + V +GEAG ITQ IGAT++P D I E
Sbjct: 10 LRTPIVAVLGHVDHGKTSLLDTIRGSAVSEGEAGAITQHIGATDIPLDTISEM------- 62
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
GE+ P ++PGLL IDTPGH SFS LR RG +L DIA+LVVD+ G +PQT E+I+I
Sbjct: 63 AGELIDPTDFDLPGLLFIDTPGHHSFSTLRARGGALADIAVLVVDVNDGFQPQTEEAIDI 122
Query: 142 LKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQT 183
L+ TPFVVA NK+D WN + + ++ +++Q ++
Sbjct: 123 LRRTGTPFVVAANKVDTTPGWNPQDGQPIQRSLEAQSERAES 164
>sp|Q3IMS5|IF2P_NATPD Probable translation initiation factor IF-2 OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=infB PE=3
SV=1
Length = 602
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 107/166 (64%), Gaps = 7/166 (4%)
Query: 18 DENFMRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKH 77
D +R IV VLGHVD GKT +LD++R + V GEAG ITQ IGAT VP D I E
Sbjct: 11 DGTALRTPIVAVLGHVDHGKTSLLDEVRGSAVTAGEAGAITQHIGATAVPLDTISEL--- 67
Query: 78 VRGPGGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIE 137
G++ P ++PGLL IDTPGH SFS LR+RG +L DIAILVVD+ G +PQ+ E
Sbjct: 68 ----AGQLVSPEDFDLPGLLFIDTPGHHSFSTLRSRGGALADIAILVVDVNDGFQPQSYE 123
Query: 138 SINILKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQT 183
+++ILK +TPF+VA NKID + WN V+ +++Q ++
Sbjct: 124 ALDILKRTQTPFIVAANKIDTVPGWNPNPDEPVQRTLEAQSDRAES 169
>sp|Q8PU78|IF2P_METMA Probable translation initiation factor IF-2 OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=infB PE=3 SV=1
Length = 591
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 104/169 (61%), Gaps = 13/169 (7%)
Query: 18 DENFMRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKH 77
D+ +R IVCV+GHVD GKT +LDK+R T + GEAG ITQ IGAT VP D I +
Sbjct: 3 DKKNLRTPIVCVMGHVDHGKTTLLDKIRGTAIVSGEAGAITQHIGATEVPIDVIID---- 58
Query: 78 VRGPGGEVGGP---GPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQ 134
++G P +PGLL IDTPGH +F+ LR+RG +L D+AI+VVDI G +PQ
Sbjct: 59 ------KLGDPRLRDRFMVPGLLFIDTPGHHAFTTLRSRGGALADLAIVVVDINEGFKPQ 112
Query: 135 TIESINILKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQT 183
T ES+ ILK KTPFVV NKIDR+ W + K Q S VQ
Sbjct: 113 TYESLQILKRFKTPFVVVANKIDRIGGWVSQKDMPFAATFKKQSSDVQA 161
>sp|Q9HNQ2|IF2P_HALSA Probable translation initiation factor IF-2 OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=infB PE=3 SV=1
Length = 600
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/147 (55%), Positives = 97/147 (65%), Gaps = 7/147 (4%)
Query: 17 EDENFMRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTK 76
+D +R IV VLGHVD GKT +LDK+R + V +GEAG ITQ IGAT VP D + E
Sbjct: 8 DDPGDLRTPIVAVLGHVDHGKTSLLDKIRGSAVIEGEAGAITQHIGATAVPLDTVSEVA- 66
Query: 77 HVRGPGGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTI 136
G + P ++PGLL IDTPGH SFS LR+RG +L DIAILVVD+ G +PQT
Sbjct: 67 ------GSLVDPTEFDLPGLLFIDTPGHHSFSTLRSRGGALADIAILVVDVNDGFQPQTE 120
Query: 137 ESINILKSKKTPFVVALNKIDRLYNWN 163
E+I ILK TPFVVA NKID WN
Sbjct: 121 EAIRILKDTGTPFVVAANKIDTTPGWN 147
>sp|B0R6U5|IF2P_HALS3 Probable translation initiation factor IF-2 OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=infB
PE=3 SV=1
Length = 600
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/147 (55%), Positives = 97/147 (65%), Gaps = 7/147 (4%)
Query: 17 EDENFMRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTK 76
+D +R IV VLGHVD GKT +LDK+R + V +GEAG ITQ IGAT VP D + E
Sbjct: 8 DDPGDLRTPIVAVLGHVDHGKTSLLDKIRGSAVIEGEAGAITQHIGATAVPLDTVSEVA- 66
Query: 77 HVRGPGGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTI 136
G + P ++PGLL IDTPGH SFS LR+RG +L DIAILVVD+ G +PQT
Sbjct: 67 ------GSLVDPTEFDLPGLLFIDTPGHHSFSTLRSRGGALADIAILVVDVNDGFQPQTE 120
Query: 137 ESINILKSKKTPFVVALNKIDRLYNWN 163
E+I ILK TPFVVA NKID WN
Sbjct: 121 EAIRILKDTGTPFVVAANKIDTTPGWN 147
>sp|O29490|IF2P_ARCFU Probable translation initiation factor IF-2 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=infB PE=3 SV=1
Length = 595
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 104/148 (70%), Gaps = 8/148 (5%)
Query: 17 EDENFMRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTK 76
E+ +R IV VLGHVD GKT +LD++R++ V EAGGITQ IGAT VP D I++ K
Sbjct: 6 EEAKALRTPIVAVLGHVDHGKTTLLDRIRKSKVVAKEAGGITQHIGATEVPLDVIKQICK 65
Query: 77 HVRGPGGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTI 136
+ ++IPGLL IDTPGH++F+NLR RG +L D+AIL+VDI G +PQT
Sbjct: 66 DI--------WKVEVKIPGLLFIDTPGHKAFTNLRRRGGALADLAILIVDINEGFKPQTE 117
Query: 137 ESINILKSKKTPFVVALNKIDRLYNWNT 164
E+++IL++ KTPFVVA NKIDR+ W +
Sbjct: 118 EALSILRTFKTPFVVAANKIDRIPGWQS 145
>sp|A1RXH6|IF2P_THEPD Probable translation initiation factor IF-2 OS=Thermofilum pendens
(strain Hrk 5) GN=infB PE=3 SV=1
Length = 601
Score = 157 bits (398), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 107/172 (62%), Gaps = 13/172 (7%)
Query: 15 NPEDENFMRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIR-- 72
N + F+RA IV VLGHVD GKT +LDK+R T V E G +TQ IGA+ +P A+
Sbjct: 3 NDQGSQFLRAPIVVVLGHVDAGKTTLLDKIRGTAVAKREPGTMTQHIGASFLPWKALEAV 62
Query: 73 --ENTKHVRGPGGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHG 130
+R + IPG L+IDTPGHE+FSNLR RG S+ DIAILVVD++ G
Sbjct: 63 CGSLVSQIRAE---------VVIPGFLVIDTPGHEAFSNLRRRGGSIADIAILVVDVLRG 113
Query: 131 LEPQTIESINILKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQ 182
LE QT ESI+IL+ +K PF+VA+NKID++ W + + +K Q + Q
Sbjct: 114 LEQQTFESIDILRERKVPFIVAVNKIDKIPGWKSFPNTPFVESVKRQSEAAQ 165
>sp|A7IAP7|IF2P_METB6 Probable translation initiation factor IF-2 OS=Methanoregula boonei
(strain 6A8) GN=infB PE=3 SV=1
Length = 591
Score = 157 bits (398), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 75/141 (53%), Positives = 100/141 (70%), Gaps = 8/141 (5%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R IVCV+GHVD GKT +LD++R ++V EAG ITQ IGAT VP +AIR+ + +
Sbjct: 6 IRTPIVCVMGHVDHGKTSLLDRIRGSSVVASEAGAITQHIGATIVPIEAIRKMSGSMEKI 65
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
P+ IPGLL IDTPGH +F+ LR RG +L D+AILVVDI G +PQTIE++ I
Sbjct: 66 --------PINIPGLLFIDTPGHHAFTTLRARGGALADMAILVVDISQGFQPQTIEALQI 117
Query: 142 LKSKKTPFVVALNKIDRLYNW 162
L++ KTPFV+A K+DR++ W
Sbjct: 118 LRNCKTPFVIAATKVDRIHGW 138
>sp|Q8TQL5|IF2P_METAC Probable translation initiation factor IF-2 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=infB PE=3 SV=1
Length = 597
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 102/168 (60%), Gaps = 13/168 (7%)
Query: 18 DENFMRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKH 77
D+ +R IVCV+GHVD GKT +LDK+R T + GEAG ITQ IGAT VP D I
Sbjct: 9 DKKNLRTPIVCVMGHVDHGKTTLLDKIRGTAIVSGEAGAITQHIGATEVPIDVIVN---- 64
Query: 78 VRGPGGEVGGP---GPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQ 134
++G P +PGLL IDTPGH +F+ LR+RG +L D+AI+VVDI G +PQ
Sbjct: 65 ------KLGDPKLRDRFMVPGLLFIDTPGHHAFTTLRSRGGALADLAIVVVDINEGFKPQ 118
Query: 135 TIESINILKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQ 182
T ES+ ILK KTPFVV NKIDR+ W + K Q VQ
Sbjct: 119 TYESLQILKRFKTPFVVVANKIDRIGGWASQKDMPFAATFKKQSPDVQ 166
>sp|Q8TV06|IF2P_METKA Probable translation initiation factor IF-2 OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=infB PE=3 SV=1
Length = 598
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 105/174 (60%), Gaps = 21/174 (12%)
Query: 17 EDENFMRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTK 76
E +R I+ VLGHVD GKT +LDK+R T V EAGGITQ IGA+ +P + ++E
Sbjct: 3 ESNKAIRQPIISVLGHVDHGKTTLLDKIRGTAVAAKEAGGITQHIGASEIPLEVVKEIC- 61
Query: 77 HVRGPGGEVGGPGPL--------EIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIM 128
GPL IPGLL IDTPGHE+F+NLR RG +L DIAILV+DIM
Sbjct: 62 ------------GPLLEQLDVEITIPGLLFIDTPGHEAFTNLRRRGGALADIAILVIDIM 109
Query: 129 HGLEPQTIESINILKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQ 182
G+ PQT E++ IL+ +TPFVVA NK+DR+ W + + + Q VQ
Sbjct: 110 EGVMPQTEEALRILRRYRTPFVVAANKVDRVPGWKSHEDTPFLESFQKQSPEVQ 163
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 165 MNRRDVRDIIKSQESSVQTH-KTVESARKGQEICIKIE-PIPGEAPKMFGRHFDENDFLV 222
+ R D R++ + +Q H + ++ A+KGQE+ I IE PI GRHF+E D L
Sbjct: 505 LMREDGREL--GEIKQIQMHGEPIKEAKKGQEVAISIEGPI-------VGRHFEEGDILY 555
Query: 223 SKISRQSIDACKDYFRDDLQKTDWQLMVDLKKV 255
+ + + + F+D L + + + + ++ ++
Sbjct: 556 TDVPSEHAKLMFEEFKDLLTEDELEALKEIAEI 588
>sp|Q2FU48|IF2P_METHJ Probable translation initiation factor IF-2 OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=infB PE=3 SV=1
Length = 604
Score = 155 bits (391), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 101/150 (67%), Gaps = 8/150 (5%)
Query: 18 DENFMRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKH 77
D +R IVCVLGHVD GKT +LD++R ++V GEAG ITQ IGAT VP D+I +
Sbjct: 14 DTPHIRTPIVCVLGHVDHGKTSLLDRIRGSSVVAGEAGAITQHIGATIVPIDSIMSMSGG 73
Query: 78 VRGPGGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIE 137
++ + IPGLL IDTPGH +F+ LR RG +L D+AI+VVDI G +PQTIE
Sbjct: 74 MKNLN--------ISIPGLLFIDTPGHHAFTTLRARGGALADMAIVVVDITEGFQPQTIE 125
Query: 138 SINILKSKKTPFVVALNKIDRLYNWNTMNR 167
+I IL++ KTPFVVA K+DR+ W + +
Sbjct: 126 AIQILRNCKTPFVVAATKLDRIPGWRSTEK 155
>sp|Q466D5|IF2P_METBF Probable translation initiation factor IF-2 OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=infB PE=3 SV=1
Length = 591
Score = 154 bits (389), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 102/169 (60%), Gaps = 13/169 (7%)
Query: 18 DENFMRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKH 77
D+ +R IVCV+GHVD GKT +LDK+R T + GEAG ITQ IGAT VP D I
Sbjct: 3 DKKNLRTPIVCVMGHVDHGKTTLLDKIRGTAIVSGEAGAITQHIGATEVPIDVIIN---- 58
Query: 78 VRGPGGEVGGP---GPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQ 134
++G P +PGLL IDTPGH +F+ LR+RG +L D+AI+VVDI G +PQ
Sbjct: 59 ------KLGDPRLRDRFIVPGLLFIDTPGHHAFTTLRSRGGALADLAIVVVDINEGFKPQ 112
Query: 135 TIESINILKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQT 183
T ES+ ILK KTPFVV NKIDR+ W + K Q VQ
Sbjct: 113 TYESLQILKRFKTPFVVVANKIDRIGGWVSQKDLPFAVTFKKQSEDVQA 161
>sp|Q2NGM6|IF2P_METST Probable translation initiation factor IF-2 OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=infB PE=3 SV=1
Length = 613
Score = 153 bits (387), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 103/160 (64%), Gaps = 7/160 (4%)
Query: 23 RAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGPG 82
R+ IV VLGHVD GKT +LD +R + + EAGGITQ IGAT +P D I G
Sbjct: 4 RSPIVSVLGHVDHGKTTLLDHIRGSTIASKEAGGITQHIGATEIPMDVISSIC------G 57
Query: 83 GEVGGPGPLE-IPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
G + E +PGL IDTPGHE+F+ LR RG SL D+AIL++D+ G +PQT E++NI
Sbjct: 58 GFLEKMNIQEQLPGLFFIDTPGHEAFTTLRKRGGSLADLAILIMDVTEGFKPQTYEALNI 117
Query: 142 LKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSV 181
LKS KTPFVVA NKID++ WN+ +++Q +V
Sbjct: 118 LKSSKTPFVVAANKIDKIPGWNSTKGECFSKAVQNQHKNV 157
>sp|A5UJM9|IF2P_METS3 Probable translation initiation factor IF-2 OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=infB PE=3
SV=1
Length = 596
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 121/215 (56%), Gaps = 22/215 (10%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R+ IV VLGHVD GKT +LD +R + + EAGGITQ IGAT +P D I EN
Sbjct: 3 IRSPIVSVLGHVDHGKTTLLDYIRGSTIAAKEAGGITQHIGATEIPNDTI-ENI------ 55
Query: 82 GGEVGGPGPLE--IPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESI 139
G+ ++ IPGL IDTPGH +F++LR RG +L D+A+L++D+ G +PQT E++
Sbjct: 56 CGDFISKLAIKDLIPGLFFIDTPGHAAFTSLRKRGGALADLAVLILDVNDGFKPQTYEAL 115
Query: 140 NILKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQTHKTVESARKGQEICIK 199
NILK KTPF+V NKIDRL+ W R+ +Q SVQ Q++ K
Sbjct: 116 NILKMYKTPFIVVANKIDRLFGWEVHEGASFRETFSNQAKSVQ-----------QDLDNK 164
Query: 200 IEPIPGEAPK--MFGRHFDENDFLVSKISRQSIDA 232
I I GE K FD S+IS I A
Sbjct: 165 IYEIVGELHKEGFQSERFDRVSNFASQISIIPISA 199
>sp|A2STM8|IF2P_METLZ Probable translation initiation factor IF-2 OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=infB
PE=3 SV=1
Length = 589
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 104/166 (62%), Gaps = 8/166 (4%)
Query: 19 ENFMRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHV 78
E +R IVCVLGHVD GKT +LD++R + V GEAG ITQ IGAT +P D+I + + +
Sbjct: 2 EEHIRTPIVCVLGHVDHGKTSLLDRIRGSKVVAGEAGAITQHIGATLIPFDSIAKMSGDL 61
Query: 79 RGPGGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIES 138
G +PGLL IDTPGH +F+ LR RG +L DIAILVVD+ G + QTIE+
Sbjct: 62 --------GRLKTSVPGLLFIDTPGHHAFTTLRARGGALADIAILVVDVNEGFKQQTIEA 113
Query: 139 INILKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQTH 184
+ IL++ KTPFV+A K+D++ W + K+Q VQT
Sbjct: 114 LQILRTCKTPFVIAATKLDKIPGWRPTPNASFQKAYKNQSERVQTE 159
>sp|A8A8D3|IF2P_IGNH4 Probable translation initiation factor IF-2 OS=Ignicoccus
hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
GN=infB PE=3 SV=1
Length = 609
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/143 (54%), Positives = 98/143 (68%), Gaps = 4/143 (2%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R IV VLGHVD GKT +LDK+R T V E G ITQ IGA+ VP D I + T+ P
Sbjct: 12 LRQPIVAVLGHVDHGKTTLLDKIRGTVVALKEPGQITQHIGASLVPTDVIEKVTE----P 67
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
++ LE+PGLL IDTPGHE FSNLR RG ++ D+AILVVD+ G +PQT E++ I
Sbjct: 68 LKKIIPTVKLELPGLLFIDTPGHEIFSNLRRRGGAVADLAILVVDLNEGFQPQTYEAVEI 127
Query: 142 LKSKKTPFVVALNKIDRLYNWNT 164
LK ++ PFVVA NKIDR+ W +
Sbjct: 128 LKQRRVPFVVAANKIDRIPGWRS 150
>sp|O26359|IF2P_METTH Probable translation initiation factor IF-2 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=infB PE=1 SV=1
Length = 594
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 102/163 (62%), Gaps = 9/163 (5%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R+ IV VLGHVD GKT +LD +R + V EAGGITQ IGAT +P D I G
Sbjct: 3 IRSPIVSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIE-------GI 55
Query: 82 GGEVGGPGPLE--IPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESI 139
G+ + +PGL IDTPGHE+F+ LR RG +L D+AIL+VDI G +PQT E++
Sbjct: 56 CGDFLKKFSIRETLPGLFFIDTPGHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEAL 115
Query: 140 NILKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQ 182
NIL+ +TPFVVA NKIDR++ W R + Q+ VQ
Sbjct: 116 NILRMYRTPFVVAANKIDRIHGWRVHEGRPFMETFSKQDIQVQ 158
>sp|Q980Q8|IF2P_SULSO Probable translation initiation factor IF-2 OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=infB PE=3 SV=1
Length = 600
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 108/166 (65%), Gaps = 5/166 (3%)
Query: 19 ENFMRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHV 78
E +R IV VLGHVD GKT +LDK+R T V E G +TQ++GA+ VP+ I + + +
Sbjct: 7 ERRLRQPIVVVLGHVDHGKTTLLDKIRGTTVVKKEPGEMTQEVGASFVPSYIIEKLAEPL 66
Query: 79 RGPGGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIES 138
+ P L+IPGLL IDTPGHE FSNLR RG S+ DIAILVVDI GL+ Q+IES
Sbjct: 67 KKVI-----PIKLQIPGLLFIDTPGHEYFSNLRRRGGSVADIAILVVDITEGLQKQSIES 121
Query: 139 INILKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQTH 184
I IL+ +K PF++A NKID++ W + N I+ Q + V+ +
Sbjct: 122 IQILRERKVPFLIAANKIDKIPGWKSNNDIPFLASIEKQRNDVKVY 167
Score = 30.8 bits (68), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 185 KTVESARKGQEICIKIEPIPGEAPKMFGRHFDENDFLVSKISRQSIDACKDYF 237
K++E A KG E+ I I+ M GRH +E D L + + ++ ++ + +
Sbjct: 521 KSLERATKGMEVAISIK-----GNIMIGRHVNEGDVLYTDVPKEDLEILVNKY 568
>sp|A3CSP4|IF2P_METMJ Probable translation initiation factor IF-2 OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=infB
PE=3 SV=1
Length = 593
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 103/164 (62%), Gaps = 8/164 (4%)
Query: 19 ENFMRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHV 78
E+ +R IVCV+GHVD GKT +LD++R ++V E G ITQ IGAT VP DA+
Sbjct: 4 ESTIRTPIVCVMGHVDHGKTSLLDRIRGSSVVSTEEGEITQHIGATLVPIDAVTRM---- 59
Query: 79 RGPGGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIES 138
GG + + +PGLL IDTPGH +F+ LR RG +L D+AI+VVDI G PQTIE+
Sbjct: 60 ---GGALSKVS-VNVPGLLFIDTPGHHAFTTLRARGGALADMAIVVVDINEGFRPQTIEA 115
Query: 139 INILKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQESSVQ 182
+ IL++ KTPFV+A NK+DR++ W + Q VQ
Sbjct: 116 LQILRNYKTPFVIAANKVDRIHGWRVQENQPFLKTFAQQNERVQ 159
>sp|Q9HJ60|IF2P_THEAC Probable translation initiation factor IF-2 OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=infB PE=3 SV=1
Length = 589
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 95/136 (69%), Gaps = 8/136 (5%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R IVCVLGHVD GKT +LD +R T+V E GGITQ+I AT V I + T+ +
Sbjct: 14 LRQPIVCVLGHVDHGKTTLLDLIRGTSVASKEPGGITQRIAATTVDISRILKETEKLNTK 73
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
G L+IPGLL IDTPGH +FSN+R RG +L D+AILV+DI G+ PQT+ESI+I
Sbjct: 74 G--------LKIPGLLFIDTPGHVAFSNMRARGGALADLAILVIDINEGIMPQTVESIDI 125
Query: 142 LKSKKTPFVVALNKID 157
LK KTPF++A NKID
Sbjct: 126 LKKFKTPFIIAANKID 141
>sp|Q97BK4|IF2P_THEVO Probable translation initiation factor IF-2 OS=Thermoplasma
volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 /
NBRC 15438 / GSS1) GN=infB PE=3 SV=1
Length = 589
Score = 148 bits (374), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 96/136 (70%), Gaps = 8/136 (5%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R IVCVLGHVD GKT +LD +R T V + E GGITQ+I AT V + I + T+ +
Sbjct: 14 LRQPIVCVLGHVDHGKTTLLDIIRGTAVANKEPGGITQRIAATTVDINKILKATEKLNNK 73
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
G ++IPGLL IDTPGH +FSN+R RG +L DIA+LV+DI G+ PQT+ESI+I
Sbjct: 74 G--------MKIPGLLFIDTPGHVAFSNMRARGGALADIAVLVIDINEGIMPQTVESIDI 125
Query: 142 LKSKKTPFVVALNKID 157
LK KTPF++A NKID
Sbjct: 126 LKKFKTPFIIAANKID 141
>sp|A2BJZ8|IF2P_HYPBU Probable translation initiation factor IF-2 OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=infB PE=3 SV=1
Length = 612
Score = 147 bits (372), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/143 (53%), Positives = 94/143 (65%), Gaps = 5/143 (3%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R IV VLGHVD GKT +LDK+R T V E G ITQ +GA+ VPA I + + ++
Sbjct: 11 LRQPIVVVLGHVDHGKTTLLDKIRGTTVAAKEPGLITQHVGASFVPASVIEKLAEPLKKI 70
Query: 82 GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINI 141
P L IPGLL IDTPGHE F+NLR RG S+ D AILVVDI G +PQT ESI I
Sbjct: 71 I-----PFKLIIPGLLFIDTPGHELFANLRRRGGSVADFAILVVDINEGFQPQTYESIEI 125
Query: 142 LKSKKTPFVVALNKIDRLYNWNT 164
L+ ++ PFVVA NKID++ W
Sbjct: 126 LRQRRVPFVVAANKIDKIPGWRA 148
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Query: 185 KTVESARKGQEICIKIEPIPGEAPKMFGRHFDENDFLVSKISRQSIDACKDYFRDDLQKT 244
K + AR G + I I M GRH DE D L + I Q F+ +L
Sbjct: 527 KVIHEARAGMAVAISIR-----GHVMVGRHIDEGDVLYTDIPEQHAVLWLTKFKSELTDD 581
Query: 245 DWQLMVDLKKVFQI 258
+ MV LK++ +I
Sbjct: 582 E---MVVLKEIIKI 592
>sp|B1YCQ7|IF2P_PYRNV Probable translation initiation factor IF-2 OS=Pyrobaculum
neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta)
GN=infB PE=3 SV=1
Length = 589
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 101/165 (61%), Gaps = 19/165 (11%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R+ V V+GHVD GKT +LDK+R T+V E G ITQ IG + VP A+ +
Sbjct: 3 VRSPFVVVMGHVDVGKTLLLDKIRGTSVAYREPGMITQHIGMSFVPWQAVEKYA------ 56
Query: 82 GGEVGGP--------GPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEP 133
GP G + IPG L IDTPGH +FSNLR RG S+ D+AILVVDI GLE
Sbjct: 57 -----GPLVDRLKLRGKIWIPGFLFIDTPGHAAFSNLRKRGGSVADLAILVVDITSGLED 111
Query: 134 QTIESINILKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQE 178
Q +ES+ +++S+ PFV+A NK+DR+Y W ++ R ++ QE
Sbjct: 112 QGVESLKLIQSRGVPFVIAANKLDRVYGWKSVENRPFLTAVEDQE 156
>sp|A1RUX2|IF2P_PYRIL Probable translation initiation factor IF-2 OS=Pyrobaculum
islandicum (strain DSM 4184 / JCM 9189) GN=infB PE=3
SV=1
Length = 588
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 103/158 (65%), Gaps = 5/158 (3%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R+ V V+GHVD GKT +LDK+R T+V E G ITQ IG + VP A+ + GP
Sbjct: 3 IRSPFVVVMGHVDVGKTLLLDKIRGTSVAYREPGMITQHIGVSFVPWQAV----ERFAGP 58
Query: 82 -GGEVGGPGPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESIN 140
++ G + IPG L IDTPGH +FSNLR RG S+ D+AILVVDI GLE Q +ES+
Sbjct: 59 LVDKLRLRGKIWIPGFLFIDTPGHAAFSNLRRRGGSVADLAILVVDITSGLEEQGVESLK 118
Query: 141 ILKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQE 178
+++S+ PF++A NK+DR+Y W ++ R ++ QE
Sbjct: 119 LIQSRGVPFIIAANKLDRIYGWKSVENRPFLFAVEQQE 156
>sp|Q8U1R8|IF2P_PYRFU Probable translation initiation factor IF-2 OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=infB
PE=3 SV=1
Length = 984
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 92/125 (73%), Gaps = 5/125 (4%)
Query: 38 TKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGPGGEVGGPGPLEIPGLL 97
T +LD++R+TNV EAGGITQ IGAT VP D ++E + GP ++ +++PGLL
Sbjct: 407 TTLLDRIRKTNVAAKEAGGITQHIGATEVPIDVVKE----IAGPLIKLW-KAEIKLPGLL 461
Query: 98 IIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINILKSKKTPFVVALNKID 157
IDTPGHE+F++LR RG SL D+A+LVVDI G +PQTIESI IL+ KTPFVVA NKID
Sbjct: 462 FIDTPGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRRYKTPFVVAANKID 521
Query: 158 RLYNW 162
R+ W
Sbjct: 522 RIKGW 526
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 13/80 (16%)
Query: 173 IIKSQESSVQTHKTVES-------ARKGQEICIKIEPIPGEAPKMFGRHFDENDFLVSKI 225
+IK V T K+++S A+KGQ + + IE + GRH + L I
Sbjct: 890 LIKQNGQKVGTIKSIKSRDEFLQEAKKGQAVAVAIEG------AIVGRHIHPGETLYVDI 943
Query: 226 SRQSIDACKDYFRDDLQKTD 245
SR Y RD L+ +D
Sbjct: 944 SRDDAITLLKYLRDVLEDSD 963
>sp|Q8ZX20|IF2P_PYRAE Probable translation initiation factor IF-2 OS=Pyrobaculum
aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM
9630 / NBRC 100827) GN=infB PE=3 SV=1
Length = 589
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 101/165 (61%), Gaps = 19/165 (11%)
Query: 22 MRAAIVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPADAIRENTKHVRGP 81
+R+ V V+GHVD GKT +LDK+R T+V E G ITQ IG + VP A+ +
Sbjct: 4 VRSPFVVVMGHVDVGKTLLLDKIRGTSVAYREPGMITQHIGMSFVPWSAVEK-------- 55
Query: 82 GGEVGGP--------GPLEIPGLLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEP 133
GP G + IPG L IDTPGH +FSNLR RG S+ D+AILVVDI GLE
Sbjct: 56 ---FAGPLVDRLRLRGRIWIPGFLFIDTPGHAAFSNLRKRGGSVADLAILVVDITSGLEE 112
Query: 134 QTIESINILKSKKTPFVVALNKIDRLYNWNTMNRRDVRDIIKSQE 178
Q +ES+ +++S+ PFV+A NK+DR+Y W ++ R ++ QE
Sbjct: 113 QGVESLKLIQSRGVPFVIAANKLDRIYGWKSVENRPFLFAVEDQE 157
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,992,440
Number of Sequences: 539616
Number of extensions: 4434185
Number of successful extensions: 24741
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3801
Number of HSP's successfully gapped in prelim test: 532
Number of HSP's that attempted gapping in prelim test: 17169
Number of HSP's gapped (non-prelim): 5678
length of query: 259
length of database: 191,569,459
effective HSP length: 115
effective length of query: 144
effective length of database: 129,513,619
effective search space: 18649961136
effective search space used: 18649961136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)