BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6322
(128 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55EH8|ABCGN_DICDI ABC transporter G family member 23 OS=Dictyostelium discoideum
GN=abcG23 PE=3 SV=2
Length = 701
Score = 95.1 bits (235), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 13/121 (10%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTEN-GKTVMITTHYIE 59
GGQQRR SLA AL+H+P LLILDEPTVG+ P++S IW+ L+ +T+N G T++ITTHY++
Sbjct: 140 GGQQRRVSLATALIHSPKLLILDEPTVGVCPLVSSKIWEHLIFLTKNFGVTIIITTHYLQ 199
Query: 60 EARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMARRNVDSLETAFLQLSQLQEHN 119
E R C+ I L+R G +L P L+++ LE + +L + E
Sbjct: 200 ECR------SCDN------IFLLRNGRILESGPPNYLLSKYECSLLEDVYYKLCRGDEEI 247
Query: 120 S 120
S
Sbjct: 248 S 248
>sp|Q8T674|ABCGK_DICDI ABC transporter G family member 20 OS=Dictyostelium discoideum
GN=abcG20 PE=3 SV=1
Length = 730
Score = 93.2 bits (230), Expect = 4e-19, Method: Composition-based stats.
Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 12/114 (10%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GGQ++R SLAVALLH+P LLILDEPTVG+D ++ +IW L + +G T++ITTHYI
Sbjct: 148 GGQKKRVSLAVALLHSPKLLILDEPTVGIDMEVASNIWSYLRSLANSGVTIIITTHYI-- 205
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMARRNVDSLETAFLQLSQ 114
EA + + L+R+G +L +P L+ R +LE FL+L +
Sbjct: 206 ----------NEAVGSDNVFLLRDGKILENGAPNYLIERYESQTLEEVFLKLCK 249
>sp|Q13ZJ1|NODI_BURXL Nod factor export ATP-binding protein I OS=Burkholderia xenovorans
(strain LB400) GN=nodI PE=3 SV=1
Length = 304
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 65/98 (66%), Gaps = 11/98 (11%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR +LA AL+++PD+LI+DEPT GLDP IW+RL + GKT+++TTH++EE
Sbjct: 139 GGMKRRLTLARALVNDPDVLIMDEPTTGLDPQARHLIWERLRSLLARGKTILLTTHFMEE 198
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMA 98
A LC H + ++ EG +AE +P++L+A
Sbjct: 199 AERLC-----------HRLCVIEEGRKIAEGAPSALIA 225
>sp|P0A9U2|YBHF_SHIFL Uncharacterized ABC transporter ATP-binding protein YbhF
OS=Shigella flexneri GN=ybhF PE=3 SV=1
Length = 578
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 68/116 (58%), Gaps = 17/116 (14%)
Query: 2 GQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEEA 61
G ++R +LA +L+H PD+L LDEPT G+DP+ + W + M E G TVM+TTH+++EA
Sbjct: 464 GFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVEKGVTVMVTTHFMDEA 523
Query: 62 RLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMARRNVD-----SLETAFLQL 112
YC+ IGL+ G L+A +P L A+ D ++E AF+QL
Sbjct: 524 E------YCDR------IGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQL 567
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 15/105 (14%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +++ LA L+ P +L+LDEP VG+DP+ + +W + E+ G ++ +T Y+
Sbjct: 141 GGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELAGEGMLILWSTSYL-- 198
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASL---MARRNV 102
+EA Q + LM EG LL + P +L MA R+
Sbjct: 199 ----------DEAEQCRDVLLMNEGELLYQGEPKALTQTMAGRSF 233
>sp|P0A9U1|YBHF_ECOLI Uncharacterized ABC transporter ATP-binding protein YbhF
OS=Escherichia coli (strain K12) GN=ybhF PE=1 SV=1
Length = 578
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 68/116 (58%), Gaps = 17/116 (14%)
Query: 2 GQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEEA 61
G ++R +LA +L+H PD+L LDEPT G+DP+ + W + M E G TVM+TTH+++EA
Sbjct: 464 GFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVEKGVTVMVTTHFMDEA 523
Query: 62 RLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMARRNVD-----SLETAFLQL 112
YC+ IGL+ G L+A +P L A+ D ++E AF+QL
Sbjct: 524 E------YCDR------IGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQL 567
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 15/105 (14%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +++ LA L+ P +L+LDEP VG+DP+ + +W + E+ G ++ +T Y+
Sbjct: 141 GGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELAGEGMLILWSTSYL-- 198
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASL---MARRNV 102
+EA Q + LM EG LL + P +L MA R+
Sbjct: 199 ----------DEAEQCRDVLLMNEGELLYQGEPKALTQTMAGRSF 233
>sp|Q2SVP3|NODI_BURTA Nod factor export ATP-binding protein I OS=Burkholderia
thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
CIP 106301) GN=nodI PE=3 SV=2
Length = 304
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 12/118 (10%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR +LA AL++NPD+L+LDEPT GLDP +W+RL + GKT+++TTH++EE
Sbjct: 139 GGMKRRLTLARALVNNPDVLVLDEPTTGLDPQARHLMWERLRSLLVRGKTILLTTHFMEE 198
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLM-ARRNVDSLETAFLQLSQLQE 117
A LC H + ++ EG +AE +P +L+ + D +E +QL+E
Sbjct: 199 AERLC-----------HRLCVIEEGRKIAEGAPRTLIESEIGCDVIEIYGPDPAQLRE 245
>sp|Q39GT7|NODI_BURS3 Nod factor export ATP-binding protein I OS=Burkholderia sp. (strain
383) GN=nodI PE=3 SV=2
Length = 304
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 11/97 (11%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR +LA AL+++PD+L+LDEPT GLDP +W+RL + GKT++ITTH++EE
Sbjct: 139 GGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILITTHFMEE 198
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLM 97
A LC +L C ++ EG +AE +P +L+
Sbjct: 199 AERLCDRL-C----------VIEEGRKIAEGAPHALI 224
>sp|Q1BWI2|NODI_BURCA Nod factor export ATP-binding protein I OS=Burkholderia cenocepacia
(strain AU 1054) GN=nodI PE=3 SV=1
Length = 304
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 11/97 (11%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR +LA AL+++PD+L+LDEPT GLDP +W+RL + GKT++ITTH++EE
Sbjct: 139 GGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILITTHFMEE 198
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLM 97
A LC +L C ++ EG +AE +P +L+
Sbjct: 199 AERLCDRL-C----------VIEEGRKIAEGAPHALI 224
>sp|P36879|YADG_ECOLI Uncharacterized ABC transporter ATP-binding protein YadG
OS=Escherichia coli (strain K12) GN=yadG PE=3 SV=1
Length = 308
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 11/99 (11%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR +A AL+H P LLILDEPT G+D L +S+W L ++ + G T+++TTHY+EE
Sbjct: 139 GGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEE 198
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMAR 99
A +LC IG+++ G L+ S +L+A+
Sbjct: 199 AEMLCRN-----------IGIIQHGELVENTSMKALLAK 226
>sp|Q3JSQ0|NODI_BURP1 Nod factor export ATP-binding protein I OS=Burkholderia
pseudomallei (strain 1710b) GN=nodI PE=3 SV=2
Length = 304
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 11/97 (11%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR +LA AL+++PD+L+LDEPT GLDP +W+RL + GKT+++TTH++EE
Sbjct: 139 GGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEE 198
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLM 97
A LC H + ++ EG +AE +P L+
Sbjct: 199 AERLC-----------HRLCVIEEGRKIAEGAPRMLI 224
>sp|Q62K72|NODI_BURMA Nod factor export ATP-binding protein I OS=Burkholderia mallei
(strain ATCC 23344) GN=nodI PE=3 SV=2
Length = 304
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 11/97 (11%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR +LA AL+++PD+L+LDEPT GLDP +W+RL + GKT+++TTH++EE
Sbjct: 139 GGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEE 198
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLM 97
A LC H + ++ EG +AE +P L+
Sbjct: 199 AERLC-----------HRLCVIEEGRKIAEGAPRMLI 224
>sp|Q63TX3|NODI_BURPS Nod factor export ATP-binding protein I OS=Burkholderia
pseudomallei (strain K96243) GN=nodI PE=3 SV=2
Length = 304
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 11/97 (11%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR +LA AL+++PD+L+LDEPT GLDP +W+RL + GKT+++TTH++EE
Sbjct: 139 GGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEE 198
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLM 97
A LC H + ++ EG +AE +P L+
Sbjct: 199 AERLC-----------HRLCVIEEGRKIAEGAPRMLI 224
>sp|P55476|NODI_RHISN Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain
NGR234) GN=nodI PE=3 SV=1
Length = 343
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 50/68 (73%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG QRR +LA AL+++P LLILDEPT GLDP IW+RL + GKT+++TTH++EE
Sbjct: 178 GGMQRRLTLACALINDPQLLILDEPTTGLDPHARHLIWERLRSLLALGKTILLTTHFMEE 237
Query: 61 ARLLCAKL 68
A LC +L
Sbjct: 238 ADRLCDRL 245
>sp|P72335|NODI_RHIS3 Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain
N33) GN=nodI PE=3 SV=1
Length = 304
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 11/97 (11%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR +LA AL+++P LL++DEPT GLDP IW+RL + GKT+++TTH++EE
Sbjct: 139 GGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRFLLARGKTIILTTHFMEE 198
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLM 97
A LC +L C ++ G LAE SP +L+
Sbjct: 199 AERLCDRL-C----------VLEHGRKLAEGSPHALI 224
>sp|Q46YX6|NODI_CUPPJ Nod factor export ATP-binding protein I OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=nodI PE=3
SV=1
Length = 325
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 51/68 (75%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR ++A AL+++PDLLI+DEPT GLDP IW+RL + +GKT+++TTH++EE
Sbjct: 160 GGMRRRLTVARALINDPDLLIMDEPTTGLDPQARHLIWERLKSLMASGKTILLTTHFMEE 219
Query: 61 ARLLCAKL 68
A LC L
Sbjct: 220 AERLCNYL 227
>sp|O52618|NODI_RHIME Nod factor export ATP-binding protein I OS=Rhizobium meliloti
(strain 1021) GN=nodI PE=3 SV=3
Length = 335
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR +LA AL+++P LLILDEPT GLDP IW+RL + GKT+++TTH +EE
Sbjct: 170 GGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHIMEE 229
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEE 91
A LC +L EA H I R +L+ E+
Sbjct: 230 AERLCDRLCVLEA--GHKIAEGRPHMLIDEK 258
>sp|Q1LKJ2|NODI_RALME Nod factor export ATP-binding protein I OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=nodI PE=3 SV=1
Length = 303
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 52/73 (71%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR ++A AL+++PDLLI+DEPT GLDP IW+RL + GKT+++TTH++EE
Sbjct: 138 GGMRRRLTVARALINDPDLLIMDEPTTGLDPQARHLIWERLKSLLSAGKTILLTTHFMEE 197
Query: 61 ARLLCAKLYCEEA 73
A LC L +A
Sbjct: 198 AERLCNHLCVIDA 210
>sp|P37624|YHIH_ECOLI Uncharacterized ABC transporter ATP-binding protein YhiH
OS=Escherichia coli (strain K12) GN=yhiH PE=3 SV=3
Length = 911
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 15/117 (12%)
Query: 2 GQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGK-TVMITTHYIEE 60
G ++R SLAVA++H P++LILDEPT G+DPV W +V+++ K T+ I+TH++ E
Sbjct: 411 GIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQDKVTIFISTHFMNE 470
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMARRNVDSLETAFLQLSQLQE 117
A C+ I LM G +LA +P L+ +R SLE AF ++ LQE
Sbjct: 471 AE------RCDR------ISLMHAGKVLASGTPQELVEKRGAASLEEAF--IAYLQE 513
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +++ L AL+H+P+LLILDEPT G+DP+ WD L++ ++ M
Sbjct: 150 GGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRSQFWD-LIDSIRQRQSNM-------- 200
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMARRNVDSLETAFLQL---SQLQE 117
+L A Y EEA + + M G +LA S L + +LE AF+ L +Q Q
Sbjct: 201 -SVLVATAYMEEAERFDWLVAMNAGEVLATGSAEELRQQTQSATLEEAFINLLPQAQRQA 259
Query: 118 HNS 120
H +
Sbjct: 260 HQA 262
>sp|P50332|NODI_RHIGA Nod factor export ATP-binding protein I OS=Rhizobium galegae
GN=nodI PE=3 SV=1
Length = 347
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 11/97 (11%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR +LA AL+++P LLILDEPT GLDP IW+RL + GKT+++TTH ++E
Sbjct: 182 GGMKRRLTLARALVNDPQLLILDEPTTGLDPPARHQIWERLRSLLIRGKTILLTTHMMDE 241
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLM 97
A +C +L E G ++AE P SL+
Sbjct: 242 AERMCDRLCVLEG-----------GRMIAEGPPLSLI 267
>sp|Q1M7W6|NODI_RHIL3 Nod factor export ATP-binding protein I OS=Rhizobium leguminosarum
bv. viciae (strain 3841) GN=nodI PE=3 SV=2
Length = 311
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 51/73 (69%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR +LA AL+++P LLILDEPT GLDP IW+RL + GKT+++TTH +EE
Sbjct: 146 GGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHIMEE 205
Query: 61 ARLLCAKLYCEEA 73
A LC +L EA
Sbjct: 206 AERLCDRLCVLEA 218
>sp|P26050|NODI_BRAJA Nod factor export ATP-binding protein I OS=Bradyrhizobium japonicum
(strain USDA 110) GN=nodI PE=3 SV=2
Length = 306
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 68/118 (57%), Gaps = 12/118 (10%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR +LA AL+++P LL++DEPT GLDP IW+RL + GKT+++TTH++EE
Sbjct: 141 GGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLARGKTILLTTHFMEE 200
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMARR-NVDSLETAFLQLSQLQE 117
A LC +L E+ G +AE P +L+ + +E L QL+E
Sbjct: 201 AERLCDRLCVLES-----------GCKIAEGKPDALIDEHIGCNVIEIYGGDLDQLRE 247
>sp|P08720|NODI_RHILV Nod factor export ATP-binding protein I OS=Rhizobium leguminosarum
bv. viciae GN=nodI PE=3 SV=1
Length = 311
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 51/73 (69%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR +LA AL+++P LLILDEPT GLDP IW+RL + GKT+++TTH +EE
Sbjct: 146 GGMKRRLTLAGALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHIMEE 205
Query: 61 ARLLCAKLYCEEA 73
A LC +L EA
Sbjct: 206 AERLCDRLCVLEA 218
>sp|Q8GNH6|NODI_RHIML Nod factor export ATP-binding protein I OS=Rhizobium meliloti
GN=nodI PE=3 SV=1
Length = 335
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 51/73 (69%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR +LA AL+++P LLILDEPT GLDP IW+RL + GKT+++TTH +EE
Sbjct: 170 GGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHIMEE 229
Query: 61 ARLLCAKLYCEEA 73
A LC +L EA
Sbjct: 230 AERLCDRLCVLEA 242
>sp|Q8KLG1|NODI_RHIEC Nod factor export ATP-binding protein I OS=Rhizobium etli (strain
CFN 42 / ATCC 51251) GN=nodI PE=3 SV=3
Length = 316
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 50/68 (73%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR +LA AL+++P LL++DEPT GLDP IW+RL + GKT+++TTH++EE
Sbjct: 151 GGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRSLLTRGKTIILTTHFMEE 210
Query: 61 ARLLCAKL 68
A LC +L
Sbjct: 211 AERLCDRL 218
>sp|P94440|YFIL_BACSU Uncharacterized ABC transporter ATP-binding protein YfiL
OS=Bacillus subtilis (strain 168) GN=yfiL PE=3 SV=2
Length = 311
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 11/105 (10%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR ++ AL+H P+LLI+DEPTVG+DP I + + ++ E G TV+ T+HY+EE
Sbjct: 135 GGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILETVKQLNETGMTVIYTSHYMEE 194
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMARRNVDSL 105
LC + IG++ +G ++A + L +R D++
Sbjct: 195 VEFLCDR-----------IGIIDQGEMIAIGTKTDLCSRLGGDTI 228
>sp|Q9Z3I3|NODI_BRASS Nod factor export ATP-binding protein I OS=Bradyrhizobium sp.
(strain SNU001) GN=nodI PE=3 SV=1
Length = 305
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 67/118 (56%), Gaps = 12/118 (10%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR +LA AL+++P LL++DEPT GLDP IW+RL + GKT+++TTH++EE
Sbjct: 140 GGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLARGKTILLTTHFMEE 199
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMARR-NVDSLETAFLQLSQLQE 117
A LC L E+ G +AE P +L+ + +E L QL+E
Sbjct: 200 AERLCDPLCVLES-----------GCKIAEGEPDALIDEHIGCNVIEIYGGDLDQLRE 246
>sp|Q8XXY9|NODI_RALSO Nod factor export ATP-binding protein I OS=Ralstonia solanacearum
(strain GMI1000) GN=nodI PE=3 SV=1
Length = 321
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 52/68 (76%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR ++A +L+++PD+L++DEPT GLDP IW+RL + +GKT+++TTH++EE
Sbjct: 150 GGMRRRLTVARSLINDPDVLVMDEPTTGLDPQARHLIWERLRSLLASGKTILLTTHFMEE 209
Query: 61 ARLLCAKL 68
A LC +L
Sbjct: 210 AERLCDEL 217
>sp|O07016|YVFR_BACSU Uncharacterized ABC transporter ATP-binding protein YvfR
OS=Bacillus subtilis (strain 168) GN=yvfR PE=3 SV=1
Length = 301
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 11/99 (11%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GGQ+RR S A+AL NP+LLILDEPTVG+D W + +++ GKT++ +THY++E
Sbjct: 133 GGQKRRLSFALALAGNPELLILDEPTVGMDTSSRHRFWQTIHGLSDQGKTIIFSTHYLQE 192
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMAR 99
A ++A Q I EG L+A+ SP + +R
Sbjct: 193 A---------DDAAQR--ILFFTEGQLVADGSPMQIRSR 220
>sp|Q84K47|AB2A_ARATH ABC transporter A family member 2 OS=Arabidopsis thaliana GN=ABCA2
PE=2 SV=1
Length = 983
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 14/124 (11%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR S+AV+L+ +P L+ LDEPT G+DP+ + +WD +++ T+ G+ +++TTH +EE
Sbjct: 667 GGMKRRLSVAVSLIGDPKLVFLDEPTTGMDPITRRHVWD-IIQETKKGRAIILTTHSMEE 725
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMARRNVDSLETAFLQLSQLQEHNS 120
A +L + IG+M +G L + L +R + A + + HN
Sbjct: 726 ADILSDR-----------IGIMAKGRLRCIGTSIRLKSRFGTGFI--ANISFVESNNHNG 772
Query: 121 KKGT 124
+ G+
Sbjct: 773 EAGS 776
>sp|P23703|NODI_RHILO Nod factor export ATP-binding protein I OS=Rhizobium loti (strain
MAFF303099) GN=nodI PE=3 SV=2
Length = 340
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 61/97 (62%), Gaps = 11/97 (11%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +R ++A AL+++P L+++DEPT GLDP IW+RL + GKT+++TTH++EE
Sbjct: 175 GGMKRCLTMARALINDPQLIVMDEPTTGLDPHARHLIWERLRALLARGKTIILTTHFMEE 234
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLM 97
A LC +L C ++ +G +AE P +L+
Sbjct: 235 AERLCDRL-C----------VLEKGRNIAEGGPQALI 260
>sp|Q9FKF2|AB11A_ARATH ABC transporter A family member 11 OS=Arabidopsis thaliana
GN=ABCA11 PE=3 SV=1
Length = 953
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 57/87 (65%), Gaps = 12/87 (13%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR S+AVAL+ +P L+ LDEPT G+DP+ + +WD +++ ++ G+ +++TTH +EE
Sbjct: 668 GGMKRRLSVAVALIGDPKLVFLDEPTTGMDPITRRHVWD-IIQESKKGRAIILTTHSMEE 726
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVL 87
A +L + IG+M +G L
Sbjct: 727 ADILSDR-----------IGIMAKGRL 742
>sp|Q9FLT5|AB9A_ARATH ABC transporter A family member 9 OS=Arabidopsis thaliana GN=ABCA9
PE=3 SV=1
Length = 950
Score = 73.2 bits (178), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 57/87 (65%), Gaps = 12/87 (13%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR S+A+AL+ +P L+ LDEPT G+DP+ + +WD +++ ++ G+ +++TTH +EE
Sbjct: 669 GGMKRRLSVAIALIGDPKLVFLDEPTTGMDPITRRHVWD-IIQESKKGRAIILTTHSMEE 727
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVL 87
A +L + IG+M +G L
Sbjct: 728 ADILSDR-----------IGIMAKGRL 743
>sp|Q84M24|AB1A_ARATH ABC transporter A family member 1 OS=Arabidopsis thaliana GN=ABCA1
PE=2 SV=2
Length = 1882
Score = 72.4 bits (176), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/101 (38%), Positives = 61/101 (60%), Gaps = 13/101 (12%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEM-TENGKT-VMITTHYI 58
GG +R+ S+A+A++ +P ++ILDEP+ G+DPV + +WD + + T +GKT V++TTH +
Sbjct: 1592 GGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKRFMWDVISRLSTRSGKTAVILTTHSM 1651
Query: 59 EEARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMAR 99
EA+ LC + IG+M G L SP L R
Sbjct: 1652 NEAQALCTR-----------IGIMVGGRLRCIGSPQHLKTR 1681
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 12/87 (13%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +R+ SL +AL+ N ++ILDEPT G+DP + W +L++ + G+ +++TTH ++E
Sbjct: 686 GGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTW-QLIKKIKKGRIILLTTHSMDE 744
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVL 87
A L + IG+M G L
Sbjct: 745 AEELGDR-----------IGIMANGSL 760
>sp|Q99758|ABCA3_HUMAN ATP-binding cassette sub-family A member 3 OS=Homo sapiens GN=ABCA3
PE=1 SV=2
Length = 1704
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +R+ S +AL+ P ++ LDEP+ G+DPV + +WD + E+GK ++IT+H +EE
Sbjct: 1517 GGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGKAIIITSHSMEE 1576
Query: 61 ARLLCAKL 68
LC +L
Sbjct: 1577 CEALCTRL 1584
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +R+ S+ +AL+ +LILDEPT G+D + ++IWD L++ ++ +T+++TTH+++E
Sbjct: 667 GGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWD-LLQRQKSDRTIVLTTHFMDE 725
Query: 61 ARLL 64
A LL
Sbjct: 726 ADLL 729
>sp|Q8R420|ABCA3_MOUSE ATP-binding cassette sub-family A member 3 OS=Mus musculus GN=Abca3
PE=2 SV=3
Length = 1704
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +R+ S +AL+ P ++ LDEP+ G+DPV + +WD + E+GK ++IT+H +EE
Sbjct: 1517 GGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGKAIVITSHSMEE 1576
Query: 61 ARLLCAKL 68
LC +L
Sbjct: 1577 CEALCTRL 1584
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +R+ S+ +AL+ +L+LDEPT G+D V ++IWD L++ ++ +TV++TTH+++E
Sbjct: 667 GGMKRKLSIGIALIAGSKVLMLDEPTSGMDAVSRRAIWD-LLQQQKSDRTVLLTTHFMDE 725
Query: 61 ARLL 64
A LL
Sbjct: 726 ADLL 729
>sp|Q8LPK0|AB8A_ARATH ABC transporter A family member 8 OS=Arabidopsis thaliana GN=ABCA8
PE=2 SV=3
Length = 901
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 12/99 (12%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR S+A++L+ +P ++ +DEP+ GLDP KS+WD +V+ + +++TTH +EE
Sbjct: 727 GGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRKSLWD-VVKRAKRKGAIILTTHSMEE 785
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMAR 99
A +LC + IG+ +G L +P L +R
Sbjct: 786 AEILCDR-----------IGIFVDGSLQCIGNPKELKSR 813
>sp|Q9FLT8|AB12A_ARATH ABC transporter A family member 12 OS=Arabidopsis thaliana
GN=ABCA12 PE=3 SV=1
Length = 917
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR S+A++L+ NP ++ LDEP+ GLDP K++W+ +++ + +++TTH +EE
Sbjct: 736 GGMKRRLSVAISLIGNPKVVYLDEPSTGLDPASRKNLWN-VIKRAKQNTAIILTTHSMEE 794
Query: 61 ARLLCAKL 68
A LC +L
Sbjct: 795 AEFLCDRL 802
>sp|Q8IZY2|ABCA7_HUMAN ATP-binding cassette sub-family A member 7 OS=Homo sapiens GN=ABCA7
PE=1 SV=3
Length = 2146
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 48/68 (70%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +R+ + A+AL+ +P ++ LDEPT G+DP + +W+ L+ + G++VM+T+H +EE
Sbjct: 1928 GGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLAVVREGRSVMLTSHSMEE 1987
Query: 61 ARLLCAKL 68
LC++L
Sbjct: 1988 CEALCSRL 1995
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG QR+ S+A+A + ++ILDEPT G+DP + IW+ L++ E G+T++++TH+++E
Sbjct: 942 GGMQRKLSVAIAFVGGSQVVILDEPTAGVDPASRRGIWELLLKYRE-GRTLILSTHHLDE 1000
Query: 61 ARLL 64
A LL
Sbjct: 1001 AELL 1004
>sp|P41234|ABCA2_MOUSE ATP-binding cassette sub-family A member 2 OS=Mus musculus GN=Abca2
PE=1 SV=4
Length = 2434
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 47/68 (69%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +R+ S A+AL+ P + LDEPT G+DP + +W+ ++++ + G++V++T+H +EE
Sbjct: 2189 GGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSHSMEE 2248
Query: 61 ARLLCAKL 68
LC +L
Sbjct: 2249 CEALCTRL 2256
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +R+ S+A+A + +ILDEPT G+DP ++IWD L+ + G+T++++TH+++E
Sbjct: 1125 GGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWD-LILKYKPGRTILLSTHHMDE 1183
Query: 61 ARLL 64
A LL
Sbjct: 1184 ADLL 1187
>sp|Q9BZC7|ABCA2_HUMAN ATP-binding cassette sub-family A member 2 OS=Homo sapiens GN=ABCA2
PE=1 SV=3
Length = 2435
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 47/68 (69%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +R+ S A+AL+ P + LDEPT G+DP + +W+ ++++ + G++V++T+H +EE
Sbjct: 2188 GGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSHSMEE 2247
Query: 61 ARLLCAKL 68
LC +L
Sbjct: 2248 CEALCTRL 2255
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +R+ S+A+A + +ILDEPT G+DP ++IWD L+ + G+T++++TH+++E
Sbjct: 1125 GGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWD-LILKYKPGRTILLSTHHMDE 1183
Query: 61 ARLL 64
A LL
Sbjct: 1184 ADLL 1187
>sp|Q9STT7|AB5A_ARATH ABC transporter A family member 5 OS=Arabidopsis thaliana GN=ABCA5
PE=3 SV=2
Length = 936
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 12/99 (12%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR S+A++L+ +P ++ +DEP+ GLDP +S+W ++ +N +++TTH +EE
Sbjct: 755 GGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRRSLWTA-IKRAKNHTAIILTTHSMEE 813
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMAR 99
A LC +L G+ +G L +P L AR
Sbjct: 814 AEFLCDRL-----------GIFVDGRLQCVGNPKELKAR 841
>sp|O35600|ABCA4_MOUSE Retinal-specific ATP-binding cassette transporter OS=Mus musculus
GN=Abca4 PE=2 SV=1
Length = 2310
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +R+ S A+AL P LL+LDEPT G+DP + +W+ +V + G+ V++T+H +EE
Sbjct: 2072 GGNKRKLSTAIALTGCPPLLLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEE 2131
Query: 61 ARLLCAKL 68
LC +L
Sbjct: 2132 CEALCTRL 2139
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 9/78 (11%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG QR+ S+A+A + + +++LDEPT G+DP +SIWD L++ +G+T++++TH+++E
Sbjct: 1064 GGMQRKLSVAIAFVGDSKVVVLDEPTSGVDPYSRRSIWDLLLKY-RSGRTIIMSTHHMDE 1122
Query: 61 ARLLC--------AKLYC 70
A LL +LYC
Sbjct: 1123 ADLLGDRIAIISQGRLYC 1140
>sp|P78363|ABCA4_HUMAN Retinal-specific ATP-binding cassette transporter OS=Homo sapiens
GN=ABCA4 PE=1 SV=3
Length = 2273
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 46/68 (67%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +R+ S A+AL+ P L++LDEPT G+DP + +W+ +V + G+ V++T+H +EE
Sbjct: 2073 GGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIREGRAVVLTSHSMEE 2132
Query: 61 ARLLCAKL 68
LC +L
Sbjct: 2133 CEALCTRL 2140
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%), Gaps = 9/78 (11%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG QR+ S+A+A + + ++ILDEPT G+DP +SIWD L++ +G+T++++TH+++E
Sbjct: 1064 GGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKY-RSGRTIIMSTHHMDE 1122
Query: 61 ARLLC--------AKLYC 70
A LL +LYC
Sbjct: 1123 ADLLGDRIAIIAQGRLYC 1140
>sp|Q9FLT4|AB10A_ARATH ABC transporter A family member 10 OS=Arabidopsis thaliana
GN=ABCA10 PE=1 SV=2
Length = 909
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 12/99 (12%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR S+A++L+ NP ++ +DEP+ GLDP K +W +++ + +++TTH +EE
Sbjct: 728 GGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKDLWT-VIQRAKQNTAIILTTHSMEE 786
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMAR 99
A LC +L G+ +G L +P L R
Sbjct: 787 AEFLCDRL-----------GIFVDGGLQCVGNPKELKGR 814
>sp|Q9ESR9|ABCA2_RAT ATP-binding cassette sub-family A member 2 OS=Rattus norvegicus
GN=Abca2 PE=1 SV=1
Length = 2434
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 47/68 (69%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +R+ S A+AL+ P + LDEPT G+DP + +W+ ++++ + G++V++T+H +EE
Sbjct: 2189 GGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSHSMEE 2248
Query: 61 ARLLCAKL 68
+C +L
Sbjct: 2249 CEAVCTRL 2256
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +R+ S+A+A + +ILDEPT G+DP ++IWD L+ + G+T++++TH+++E
Sbjct: 1125 GGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWD-LILKYKPGRTILLSTHHMDE 1183
Query: 61 ARLLCAKL 68
A LL ++
Sbjct: 1184 ADLLGDRI 1191
>sp|P32010|DRRA_STRPE Daunorubicin/doxorubicin resistance ATP-binding protein DrrA
OS=Streptomyces peucetius GN=drrA PE=1 SV=1
Length = 330
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR +A +++ PDLL LDEPT GLDP +WD + + + G TV++TT Y++E
Sbjct: 142 GGMRRRLDIAASIVVTPDLLFLDEPTTGLDPRSRNQVWDIVRALVDAGTTVLLTTQYLDE 201
Query: 61 ARLLCAKL 68
A L ++
Sbjct: 202 ADQLADRI 209
>sp|Q9STT5|AB7A_ARATH ABC transporter A family member 7 OS=Arabidopsis thaliana GN=ABCA7
PE=1 SV=2
Length = 935
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +RR S+A++L+ NP ++ +DEP+ GLDP K++W +++ + +++TTH +EE
Sbjct: 754 GGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKNLWT-VIKRAKQNTAIILTTHSMEE 812
Query: 61 ARLLCAKL 68
A LC +L
Sbjct: 813 AEFLCDRL 820
>sp|Q58488|ECFA_METJA Energy-coupling factor transporter ATP-binding protein EcfA
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=ecfA PE=3
SV=1
Length = 279
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 67/115 (58%), Gaps = 13/115 (11%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GGQ++R ++A L P++++LDEPT GLDPV + I L ++ + G T++I+TH ++
Sbjct: 142 GGQKKRVAIAGILAMQPEVIVLDEPTAGLDPVGASKIMKLLYDLNKKGMTIIISTHDVDL 201
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMARRNVDSLETAFLQLSQL 115
+ K+Y +M +G +L E +P + + +V+++ A L+L ++
Sbjct: 202 VPVYADKVY-----------VMYDGKILKEGTPKEVFS--DVETIRKANLRLPRV 243
>sp|Q50801|Y583_METTM Putative ABC transporter ATP-binding protein MTBMA_c05830
OS=Methanothermobacter marburgensis (strain DSM 2133 /
14651 / NBRC 100331 / OCM 82 / Marburg) GN=MTBMA_c05830
PE=3 SV=2
Length = 278
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 67/115 (58%), Gaps = 13/115 (11%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG+++R ++A L PD++ILDEPT GLDP + I L E+ E G T++I+TH ++
Sbjct: 142 GGEKKRVAIAGILAMKPDIMILDEPTSGLDPRGASQILRLLHELNEEGMTIIISTHDVDL 201
Query: 61 ARLLCAKLYCEEARQAHIIGLMREGVLLAEESPASLMARRNVDSLETAFLQLSQL 115
A L ++Y ++ G +++E +P + + ++D++ A L+L ++
Sbjct: 202 APLYSDRIY-----------IISGGEIISEGTPGDVFS--DIDTIRGADLRLPRI 243
>sp|Q7TNJ2|ABCA7_RAT ATP-binding cassette sub-family A member 7 OS=Rattus norvegicus
GN=Abca7 PE=1 SV=1
Length = 2170
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 47/68 (69%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG +R+ + A+AL+ +P ++ LDEPT G+DP + +W+ L+ + G++V++T+H +EE
Sbjct: 1953 GGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNNLLSVVREGRSVVLTSHSMEE 2012
Query: 61 ARLLCAKL 68
LC +L
Sbjct: 2013 CEALCTRL 2020
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 1 GGQQRRTSLAVALLHNPDLLILDEPTVGLDPVLSKSIWDRLVEMTENGKTVMITTHYIEE 60
GG QR+ S+A+A + ++I+DEPT G+DP + IW+ L++ E G+T++++TH+++E
Sbjct: 940 GGMQRKLSVAIAFVGGSRVVIMDEPTAGVDPASRRGIWELLLKYRE-GRTLILSTHHLDE 998
Query: 61 ARLL 64
A LL
Sbjct: 999 AELL 1002
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,237,513
Number of Sequences: 539616
Number of extensions: 1522347
Number of successful extensions: 9184
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3652
Number of HSP's successfully gapped in prelim test: 175
Number of HSP's that attempted gapping in prelim test: 4475
Number of HSP's gapped (non-prelim): 4591
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)