BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6337
(797 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VRJ1|SYAM_DROME Alanine--tRNA ligase, mitochondrial OS=Drosophila melanogaster
GN=Aats-ala-m PE=2 SV=1
Length = 1012
Score = 363 bits (932), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 257/818 (31%), Positives = 414/818 (50%), Gaps = 60/818 (7%)
Query: 2 RNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLL 61
R+DL E+WN+VFI + R + +I L +++DTG+GFERL +LQNK+S YDTDLF P+
Sbjct: 215 RSDLTELWNLVFIQYNRHADGSISQLPAHHVDTGMGFERLTAVLQNKSSNYDTDLFTPIF 274
Query: 62 ETIEKVSGAKPYGRTFT-TSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVR 120
+ I++ + Y +F N LDTSYR+L+D++RM+T LAD M PD KLR V+R
Sbjct: 275 DGIQQAAKTPVYSGSFPDGGNAAVLDTSYRILADHARMVTACLADGMLPDQNQKLRRVLR 334
Query: 121 DALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKA 180
AL ISE VF KL+ +L + E LG+ YPE+ + ++ E ++ NLR++
Sbjct: 335 KALNISEHVF--AHDKLLTQLVPIVVETLGEAYPEMAAKQQAVIDLICHEQEVYKNLRES 392
Query: 181 AVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGL 240
+ K + ++ P L+ ++ME PG V + L Q + + T I GD + L DTYGL
Sbjct: 393 SSKAFAEVLMEFPNLDDIDLMECPGFVPAYRELQMQRCKFSNNT-IPGDFLYKLTDTYGL 451
Query: 241 SKNIIQELAAAKKLTLCHEAF--EQKLNELKERSKAKAASNVPDIDL-----------MD 287
++ +LA + + E + E L +LK + + + DL M
Sbjct: 452 TEESFLKLAELENMNCDLERYRAEVSLAKLKAKGNQRETAGGSLCDLATEQRIAEAQAML 511
Query: 288 LKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASID 347
K TD+ +KY Y +D S Y P L T ++G+++ D +R+ S
Sbjct: 512 TKRLTPTDNSHKYTYSFDKESDSYQIPPLKTRVLGMLLNDAEV---------SRTQGS-- 560
Query: 348 SIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN--GKVEIGELASLEGKIV 405
IQ + ++ +N Y +GGQ D G ++N Q + +++ + L +V
Sbjct: 561 RIQQPFTDLISIVTAGSNFYYESGGQQSDGGKILVSNHQQPDHPHSLDVIGVKHLNDCVV 620
Query: 406 HFGNVVS---SFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCR 461
H + S +F++ G ++VDA+ R HT +HLLNAA+R + TYQ S
Sbjct: 621 HICKLSSPTDAFQLAIGDEVELQVDAQQRQLNTCHHTATHLLNAAIRSLFKKVTYQVSSS 680
Query: 462 VFSDECALDFSVYGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPG 521
V SD+C L+ + G+ + V +E IN VI V+ + + A+E+ +T++PG
Sbjct: 681 VSSDQCKLELGLLGKRIQKTDVQLIEDLINRVICSAAPVEVQLLSAAEVLEQNDITMVPG 740
Query: 522 EIYPDDVI-LIDISDKE-NVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 579
E+YP+ + L+++ E + S+E CCGTH NT + ++ K N + + G
Sbjct: 741 EVYPEQGLRLVNVESPELQLSSKELCCGTHATNTSELSCFCIVNLKQTNRARFAFTAVAG 800
Query: 580 ESSKAAVENGKQLSAAVKQLAATINQNSEQTDEETLNQQNHEIKTLRE-LLEDD--LPYA 636
++++ ++ L V L + QTD+ T N E++T+R +L D LPYA
Sbjct: 801 QAAENVLKTAALLRHRVDLL-----EKQFQTDKLT-NATEAELQTIRHNMLHTDIKLPYA 854
Query: 637 VHKQNDHLLAELSKNVK----LKLRQFAKVRITEELIEKCKEDTPYLVHYIRDDAV--EI 690
+ E+ K +K L++F V + L EK + P+++HYI A+ EI
Sbjct: 855 FKMDTLERITEMLKRIKDSSRTTLKEFVDVEMRTLLQEKPLDTHPFILHYITSSALVEEI 914
Query: 691 QALPPLSQISK-----PVLVLLYSLGELKARAYVPPQCTTPGFNAQAWLTPIMDRAEGKG 745
PL + +K P+LV+ +KAR VP +C T FNA AWL D G+
Sbjct: 915 ----PLQRATKLCPDRPILVISVCDSVVKARCCVPEKCITEKFNASAWLQSFADTFNGQI 970
Query: 746 VSSKGSDVQHLYSMNPVKISNNVEDLVKQLVDIARRSA 783
+ KG + Q + +M ++SN E+ ++Q + A A
Sbjct: 971 AAPKGQNPQAVCNMKGRRVSNLFEEQLEQAMSKAHAYA 1008
>sp|Q9VLM8|SYAC_DROME Alanine--tRNA ligase, cytoplasmic OS=Drosophila melanogaster
GN=Aats-ala PE=2 SV=1
Length = 966
Score = 255 bits (652), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 198/703 (28%), Positives = 325/703 (46%), Gaps = 90/703 (12%)
Query: 1 DRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPL 60
D D++EIWN+VFI + R S ++ L K +ID G+GFERLV+++QNK S YDTDLF+PL
Sbjct: 206 DDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCGMGFERLVSVIQNKRSNYDTDLFVPL 265
Query: 61 LETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRN 117
+ I+ +GA PY + +D +YR+L+D++R IT+ALAD PD T + LR
Sbjct: 266 FDAIQAGTGAPPYQGRVGADDVDGIDMAYRVLADHARTITIALADGGTPDNTGRGYVLRR 325
Query: 118 VVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNL 177
++R A+ + + K G L + ++LGD +PE++ I I+ EE F
Sbjct: 326 ILRRAVRYATEKLNAKPG-FFATLVNTVVDLLGDAFPEVKKDPQHIIDIINEEELQF--- 381
Query: 178 RKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDT 237
+KT L G L + + + + T I GD+A+ LYDT
Sbjct: 382 -----------LKT--------------LTRGRNLLNRTIEKLGNQTTIPGDVAWRLYDT 416
Query: 238 YGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDL-------MDLKH 290
YG ++ Q +A K L + + +E + S+ K AS + +I+L + +
Sbjct: 417 YGFPVDLTQLMAEEKSLKIDMDGYEAAKHNSYVLSQGKGASKIEEINLDVHAISQLQEQG 476
Query: 291 FPVTDDKYKYDYHY--DTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDS 348
P T+D +KY Y D Y + ++ +V + +Q + SG
Sbjct: 477 VPPTNDTFKYKYEAVSDERDSAYNYGVCNSKIVALRFENQF-------VNEITSGQK--- 526
Query: 349 IQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFG 408
G++ DKTN YA +GGQI D G L E + + + + G I+H G
Sbjct: 527 --------AGIVLDKTNFYAESGGQIYDQGA--LVKVNDEANEFLVDRVYNRGGYILHIG 576
Query: 409 NVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTC-TYQKSCRVFSDEC 467
V + KV G + +D R M+ H+ +H LN L +VL T QK V ++
Sbjct: 577 VVEGTLKV--GDELELHIDVERRWLTMKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKL 634
Query: 468 ALDFSVYGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDD 527
DF+ ++++ V+ E+ +++ V + + + + + L + E+YPD
Sbjct: 635 RFDFNSKA-AMTIEQVSKTEQLTKEMVYKNVPIYAKESKLALAKKIRGLRSVFDEVYPDP 693
Query: 528 VILIDI------------SDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIK 575
V +I S+ S E C GTH+ +GHI + ++ G+R I
Sbjct: 694 VRVISFGVPVDELEQNPDSEAGEQTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIV 753
Query: 576 CLTGESSKAAVENGKQLSAAVKQLAATINQNSEQTDEETLNQQNHEIKTLRELLED---- 631
LTG + A++ + + +L ATI+ + D ++ +K + EL E
Sbjct: 754 ALTGPEALKALKKSEAFEQEIVRLKATIDNDKSGKDSKS------HVKEIVELTEQISHA 807
Query: 632 DLPYAVHKQNDHLLAELSKNVKLKLRQF-AKVRITEELIEKCK 673
+PY + +LL L K + K R A V +T ++E+ K
Sbjct: 808 TIPYVKKDEMRNLLKGLKKTLDDKERALRAAVSVT--VVERAK 848
>sp|O01541|SYAC_CAEEL Alanine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans
GN=aars-2 PE=2 SV=1
Length = 968
Score = 249 bits (637), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 212/786 (26%), Positives = 356/786 (45%), Gaps = 106/786 (13%)
Query: 5 LIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETI 64
++EIWN+VFI R + PL +ID GLG ERL+ ++Q+KTS YDTD+F P+ E I
Sbjct: 211 VVEIWNLVFIQFNREEGGVLKPLPAKHIDCGLGLERLIAVMQDKTSNYDTDIFQPIFEAI 270
Query: 65 EKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRD 121
K SG + Y ++ +D +YR+++D+ R +T+AL+D PD + + LR ++R
Sbjct: 271 HKGSGVRAYTGFIGDEDKDGVDMAYRVVADHVRTLTIALSDGGRPDNSGRGYVLRRILRR 330
Query: 122 ALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI-QDSINKIQLILGEESRIFDNLRKA 180
+ + + + G L + ILG+ +PE+ +D + + +I EE + L +
Sbjct: 331 GVRYASEKLNAQPG-FFASLVPVVISILGETFPELSRDPVTVMDIINDEEKQFLKTLSRG 389
Query: 181 AVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGL 240
V ++ V++ PE M P GD+++ LYDTYG
Sbjct: 390 RVL-FQRAVQSLPE----GTMTFP-----------------------GDVSWRLYDTYGF 421
Query: 241 SKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDL-------MDLKHFPV 293
++ Q +A K L++ + AFE+ + E S A +DL + K P
Sbjct: 422 PADLTQLMAEEKGLSVDNTAFEEARRKAIETSSAGTGKFRDTLDLDVHALAELQQKGVPT 481
Query: 294 TDD--KYKYDYHYDTNSKRYTF-PCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQ 350
TDD KY Y + + + Y F PC VG ++ AIR R G +D Q
Sbjct: 482 TDDSPKYAYTFTGEGSDAVYKFEPC-----VGKIL----------AIR--RDGKFVD--Q 522
Query: 351 LEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNV 410
L ++ D+TN YA GGQI D+GV LT E+ + + G IV G+
Sbjct: 523 LAAGEEGAILLDRTNFYAEQGGQIYDVGV--LTKVNDESNEFNVSNCQVRGGYIVLVGSA 580
Query: 411 VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQKSCRVFSDECALD 470
SF V + R + D + + M+ HT +H+LN ALR+VL + QK V D D
Sbjct: 581 EGSFSVGDQVNERFDEDRKQLI--MKNHTGTHVLNYALRKVLADSDQKGSLVAPDRMRFD 638
Query: 471 FSVYGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVIL 530
F+ ++V V E+Y +I + QV ++ E + L + E YPD V +
Sbjct: 639 FTNKA-GMTVQQVKKAEEYAQQLIDTKGQVYAKNSPLGEAKKVKGLRAMFDETYPDPVRV 697
Query: 531 IDISDKENVISREP------------CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLT 578
+ + + + P C GTH+ N HI + ++ G+R I LT
Sbjct: 698 VAVGTPVEQLLQNPDAEEGQNTTVEFCGGTHLQNVSHIGRIVIASEEAIAKGIRRIVALT 757
Query: 579 GESSKAAVENGKQLSAAVKQLAATINQNSEQTDEETLNQQNHEI--KTLRELLED----D 632
G ++ A+ +L+A +++ + +++++ DE N+ + K ++E++++
Sbjct: 758 GPEAERAIARADRLTARLEEES----KHADKKDELLANKDKFKALQKKIQEIVDEANGAQ 813
Query: 633 LPYAVHKQNDHLLAELSKNVKLKLRQFAKVR---ITEELIEKCKE-----DTP-YLVHYI 683
LPY + E +K ++ L + K + + E+++ + KE + P LVH
Sbjct: 814 LPY----WRKDSIREKAKAIQKTLDGYTKAQQAAVAEKVLGEAKELAAVAEQPTVLVHVF 869
Query: 684 RDDAVEIQALPPLSQISKPVLVLLYSLGELKAR----AYVPPQCTTPGFNAQAWLTPIMD 739
+A L + V+ +S+ E + A V + G A W+ +
Sbjct: 870 AANANSKAIDNALKLLKDTKAVMAFSVNEDSGKVLCLAKVDKSLVSNGLKANEWVNEVCT 929
Query: 740 RAEGKG 745
GKG
Sbjct: 930 VLGGKG 935
>sp|Q14CH7|SYAM_MOUSE Alanine--tRNA ligase, mitochondrial OS=Mus musculus GN=Aars2 PE=2
SV=1
Length = 980
Score = 242 bits (618), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 209/775 (26%), Positives = 357/775 (46%), Gaps = 83/775 (10%)
Query: 5 LIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETI 64
L+E+WN+VF+ H R + ++ L + ++DTG+G ERLV +LQ K STYDTDLF PLL+ I
Sbjct: 232 LVELWNLVFMQHYREADGSLQLLPQRHVDTGMGLERLVAVLQGKRSTYDTDLFSPLLDAI 291
Query: 65 EKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRD 121
+ GA PY ++ +DT+YR+++D+ R ++V +AD + P + LR ++R
Sbjct: 292 HQSCGAPPYSGRVGAADEGRIDTAYRVVADHIRTLSVCIADGVSPGMSGAPLVLRRILRR 351
Query: 122 ALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAA 181
A+ S +V + G + L + E LG YPE++ + KI ++ E+ F A+
Sbjct: 352 AVRYSTEVLQAPPG-FLGSLVPVVVETLGSAYPELEKNSVKIASLVSEDEAAF----LAS 406
Query: 182 VKEWKPLV-KTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGL 240
++ + ++ +T L ++ P V L+ L + E+ + DT GL
Sbjct: 407 LQRGRRIIDRTVKRLGPSDLF--PAEVAWSLSLSGNLGIPLDLVELMLEEKGVKLDTAGL 464
Query: 241 SKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKY 300
+ L + + + + + + + +V ++ + + P TDD KY
Sbjct: 465 EQ-------------LAQKEAQHRAQQAEADQEDRLCLDVHALEELHRQGIPTTDDSPKY 511
Query: 301 DYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLI 360
+Y N Y F + ++ + ++ +G ++ S+ GL+
Sbjct: 512 NYTLHPNGD-YEFGLCEARVLQL---------------YSETGTAVASVGAGQR--CGLL 553
Query: 361 FDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGL 420
D+TN YA GGQ D G YL T Q++ + G I+H +V G
Sbjct: 554 LDRTNFYAEQGGQASDRG--YLVRTGQQDMLFPVAGAQLCGGFILHEAMAPERLQV--GD 609
Query: 421 TSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGET-LS 479
++ VD R+GCM HT +HLL+ ALR+ L T ++ + E L F V +T L+
Sbjct: 610 QVQLYVDKAWRMGCMVKHTATHLLSWALRQTLGPTTEQRGSHLNPE-RLRFDVATQTLLT 668
Query: 480 VDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPG-----EIYPDDV------ 528
+ + VE Y+ +V+ + + E+P L H IPG E+YPD V
Sbjct: 669 TEQLRTVESYVQEVVGQD-----KPVFMEEVP-LAHTARIPGLRSLDEVYPDPVRVVSVG 722
Query: 529 -----ILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSK 583
L S S E CCGTH+ +TG + +IG + G+ + +TGE ++
Sbjct: 723 VPVAHALGPASQAAMHTSVELCCGTHLLSTGAVGDLVIIGERQLVKGITRLLAITGEQAQ 782
Query: 584 AAVENGKQLSAAVKQLAATINQNSEQTDEETLNQQNHEIKTLRELLEDD-LPYAVHKQND 642
A E G+ LS V+ + ++Q S E ++ + +I L E+ E +P ++
Sbjct: 783 QAREVGQSLSQEVEAASERLSQGSRDLPEA--HRLSKDIGRLTEVAESAVIPQWQRQELQ 840
Query: 643 HLLAELSKNVKLKLRQFAKVRITE---ELIEKCKEDTPYLVHYIRDD--AVEIQALPPLS 697
L L + +R+ K + TE EL+++ E P +V + + +V ++ + L
Sbjct: 841 TTLKMLQRRANTAIRKLEKGQATEKSQELLKRHSEG-PLIVDTVSAESLSVLVKVVRQLC 899
Query: 698 QISKPVLVLLYS---LGELKARAYVPPQCTTPGFNAQAWLTPIMDRAEGKGVSSK 749
+ + + VLL S G + V Q TP F A+AW + GK S+
Sbjct: 900 KQAPSISVLLLSPQPTGSVLCACQV-AQDATPTFTAEAWALAVCSHMGGKAWGSR 953
>sp|D3ZX08|SYAM_RAT Alanine--tRNA ligase, mitochondrial OS=Rattus norvegicus GN=Aars2
PE=2 SV=1
Length = 985
Score = 227 bits (579), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 209/788 (26%), Positives = 351/788 (44%), Gaps = 106/788 (13%)
Query: 5 LIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETI 64
L+E+WN+VF+ H R + ++ L + ++DTG+G ERLV +LQ K STYDTDLF PLL+ I
Sbjct: 232 LVELWNLVFMQHYREADGSLHLLPQQHVDTGMGLERLVAVLQGKHSTYDTDLFSPLLDAI 291
Query: 65 EKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRD 121
+ PY ++ +DT+YR+++D+ R ++V +AD + P + LR ++R
Sbjct: 292 HQSCRVPPYSGRVGAADEGRIDTAYRVVADHIRTLSVCIADGVSPGMSGAPLVLRRILRR 351
Query: 122 ALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAA 181
A+ S +V + G + L + LG YPE+Q N +++++ E + + A
Sbjct: 352 AVRYSTEVLQAPPG-FLGNLVPVVVATLGAAYPELQK--NSVKVLIWEIANLVSEDEAAF 408
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAF--TLYDTYG 239
+ L G + + + + R ++A+ +L G
Sbjct: 409 LAS---------------------LQRGRRIIDRTVKRLGPSDLFPAEVAWSLSLSGNLG 447
Query: 240 LSKNIIQELAAAKKLTLCHEAFEQ-KLNELKERSKAKAAS-------NVPDIDLMDLKHF 291
+ +++Q + K + L EQ E + R++ A+ +V ++ + +
Sbjct: 448 IPLDLVQLMLEEKGVKLDTAGLEQLAQKEAQHRAQQAEAAQEEGLCLDVHALEELHRQGI 507
Query: 292 PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQL 351
P TDD KY+Y N Y F + ++ + ++ +G ++ S+
Sbjct: 508 PTTDDSPKYNYSLRPNGD-YEFGLCEAQVLQL---------------YSETGTAVASVGE 551
Query: 352 EHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVV 411
GL+ D+TN YA GGQ D G YL T Q++ + G I+H
Sbjct: 552 GQR--CGLLLDRTNFYAEQGGQASDRG--YLIRTGQQDVLFPVARAQVCGGFILHEAMAP 607
Query: 412 SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQKSCRVFSDECALDF 471
+V G ++ VD R+GCM HT +HLLN ALR+ L T ++ + E L F
Sbjct: 608 ECLQV--GDRVQLYVDKAWRMGCMVKHTATHLLNWALRQTLGPTTEQRGSHLNPE-RLRF 664
Query: 472 SVYGET-LSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPG-----EIYP 525
V +T L+ + + VE Y+ + + + + E+P L H IPG E+YP
Sbjct: 665 DVATQTPLTTEQLRTVESYVQEAVGQD-----KPVYMEEVP-LAHTARIPGLRSLDEVYP 718
Query: 526 DDV-----------ILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSI 574
D V L S S E CCGTH+ +TG + +IG + G+ +
Sbjct: 719 DPVRVVSVGVPVAQALAPASQAALQTSVELCCGTHLLSTGAVGDLVIIGDRQLVKGITRL 778
Query: 575 KCLTGESSKAAVENGKQLSAAVKQLAATINQNSEQTDEETLNQQNHEIKTLRELLEDD-L 633
+TGE ++ A E G+ LS V+ + +++ S E ++ + +I L E E +
Sbjct: 779 LAITGEQAQQAREVGQSLSQEVEVASERLSRGSRDLLEA--HRLSKDIGRLIEFTESAVI 836
Query: 634 PYAVHKQNDHLLAELSKNVKLKLRQFAKVRITE---ELIEKCKEDTPYLVHYIRDDAVEI 690
P ++ L L + +R+ K + TE EL+++ E P +V D V
Sbjct: 837 PQWQRQEQQTTLKMLQRRANTAIRKLEKSQATEKSQELLKRHSEG-PLIV-----DTVSA 890
Query: 691 QALPPLSQISKPVL-------VLLYS---LGELKARAYVPPQCTTPGFNAQAWLTPIMDR 740
Q+L L ++ + + VLL S G + V Q TP F A+AW +
Sbjct: 891 QSLSVLVKVVRQLCKQAPSMSVLLLSPQPTGSVLCACQV-AQGATPTFTAEAWALAVCSH 949
Query: 741 AEGKGVSS 748
GK S
Sbjct: 950 MGGKAWGS 957
>sp|P36428|SYA_ARATH Alanine--tRNA ligase OS=Arabidopsis thaliana GN=ALATS PE=1 SV=3
Length = 1003
Score = 223 bits (568), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 172/602 (28%), Positives = 283/602 (47%), Gaps = 89/602 (14%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+EIWN+VFI R S ++ PL ++DTG+GFERL ++LQNK S YDTD+F+P+ + I+
Sbjct: 265 LEIWNLVFIQFNRESDGSLKPLPAKHVDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQ 324
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA 122
K +GA+PY + +D +YR+++D+ R ++ A+AD P + LR ++R A
Sbjct: 325 KATGARPYSGKVGPEDVDRVDMAYRVVADHIRTLSFAIADGSRPGNEGREYVLRRILRRA 384
Query: 123 LLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAV 182
+ +++ K ++G L ++ ++GDV+ E+++ KI I+ EE F
Sbjct: 385 VRYGKEILKAEEG-FFNGLVSSVIRVMGDVFTELKEHEKKITDIIKEEEASF-------- 435
Query: 183 KEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSK 242
K L K +E+F ++ + +SGD AF L+DTYG
Sbjct: 436 --CKTLAKG---IEKF----------------RKAGQAVQGNTLSGDDAFILWDTYGFPL 474
Query: 243 NIIQELAAAKKLTLCHEAFEQKLNELKERS-----KAKAASNVPDIDLMDLKH---FPVT 294
++ Q +A + L + + F + + E +ERS K + V D D H T
Sbjct: 475 DLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHKAGVSAT 534
Query: 295 DDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHN 354
DD +KY + D S+ L I G S A+ D+
Sbjct: 535 DDSFKYIWFQDHESE----------LKAIYTGSTFL----------ESSAASDN------ 568
Query: 355 AWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVS-S 413
VGL+ T+ YA GGQI D G+ + T V+I G ++H G + +
Sbjct: 569 --VGLVLGSTSFYAEQGGQIFDTGLIEGSFGTFNVCNVQI-----FGGFVLHIGYLSKET 621
Query: 414 FKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFS 472
+V+ G +VD R HT +H+LN AL+ VL QK V ++ DFS
Sbjct: 622 GEVSVGDKVICKVDYERRKLIAPNHTCTHMLNYALKEVLGDHIDQKGSIVLPEKLRFDFS 681
Query: 473 VYGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILID 532
+G+ + + + +E +N I D++ V + SE + L + GE+YPD V ++
Sbjct: 682 -HGKPVDPEDLRRIESIVNKQIKDELDVFSKEAVLSEAKRIKGLRAVFGEVYPDPVRVVS 740
Query: 533 I--------SDKEN----VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGE 580
I +D EN ++S E C GTH+ NT ++ ++ + G+R + +T E
Sbjct: 741 IGRKVEDLLADPENNEWSLLSSEFCGGTHITNTREAKAFALLSEEGIAKGIRRVTAVTTE 800
Query: 581 SS 582
+
Sbjct: 801 CA 802
>sp|O13914|SYA_SCHPO Alanine--tRNA ligase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ala1 PE=1 SV=1
Length = 959
Score = 216 bits (551), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 167/634 (26%), Positives = 278/634 (43%), Gaps = 101/634 (15%)
Query: 1 DRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPL 60
D +++EIWNIVFI R ++ PL ++DTG+GFERLV+++QNKTS YDTD+F P+
Sbjct: 212 DDPNVLEIWNIVFIQFNREKDGSLRPLPNRHVDTGMGFERLVSVIQNKTSNYDTDVFSPI 271
Query: 61 LETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRN 117
I++++ A+PY + +DT+YR+++D+ R +T A++D P+ + LR
Sbjct: 272 FAKIQELTNARPYTGKMGDEDVDGIDTAYRVVADHVRTLTFAISDGGVPNNEGRGYVLRR 331
Query: 118 VVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNL 177
++R F V G LS + E +GD +PE++ ++ ++ +L EE F
Sbjct: 332 ILRRGARYVRKKFGVPIGNFFSRLSLTVVEQMGDFFPELKRKVDDVRELLDEEEESFS-- 389
Query: 178 RKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDT 237
+ L + + EQ+ + PS T + G+ + LY+T
Sbjct: 390 --------RTLDRGEKMFEQY---------------AAAAKKTPSKT-LQGNDVWRLYET 425
Query: 238 YGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK--AKAASNVPDIDLMD-------- 287
YG ++ +A + + FE KE SK +K S+ D+ ++D
Sbjct: 426 YGFPVDLTHLMAEEAGIKIDEPGFEAAQARSKEISKQASKGGSSGDDLLVLDVHALGALS 485
Query: 288 -LKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASI 346
+ P TDD +K++ +L ++ G I H + G
Sbjct: 486 KMDDIPETDDVFKHN---------------SVSLKSVIKG----------IYH-KGGFQK 519
Query: 347 DSIQLEHNAWVGLIFDKTNLYATAGGQ--------IDDIGVAYLTNTTQENGKVEIGELA 398
+ +GL+ D+TN YA GGQ ID + +TN G V
Sbjct: 520 STEGFNSGEQLGLLLDRTNFYAEQGGQEYDTGHIVIDGVADFRVTNVQVYAGYV------ 573
Query: 399 SLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQ 457
L + +GN+ + V E D R M HT +H+LN ALR L Q
Sbjct: 574 -LHTGFLEYGNLTVNDSVV------CEYDEIRRWHLMNNHTVTHILNLALRNTLGDGIDQ 626
Query: 458 KSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLT 517
+ V ++ DFS Y ++ +D + VE Y N+VI D + V + + S+ + L
Sbjct: 627 RGSLVSQEKLRFDFS-YKSSIPIDKLLLVENYCNNVIQDNLSVYSKEVALSKAKEINGLR 685
Query: 518 VIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFNTGHIESCTVIGYK 565
+ GE+YPD V ++ I + + +EP C GTH +G I+ ++
Sbjct: 686 AVFGEVYPDPVRVVCIGVDIDTLLQEPKKPDWTKYSIEFCGGTHCDKSGEIKDFVILEEN 745
Query: 566 SYNHGVRSIKCLTGESSKAAVENGKQLSAAVKQL 599
G+R I +T + + A + +L
Sbjct: 746 GIAKGIRRIVAVTSTEANRVSRLANEFDARIAKL 779
>sp|Q5A8K2|SYA_CANAL Alanine--tRNA ligase OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=ALA1 PE=1 SV=1
Length = 969
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 166/607 (27%), Positives = 272/607 (44%), Gaps = 85/607 (14%)
Query: 1 DRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPL 60
D +++E+WN+VFI + R + + L +IDTG+GFERLV+ILQNK S YDTD+FLP+
Sbjct: 226 DDPNVLEVWNVVFIQYNREADGNLRTLPNKHIDTGMGFERLVSILQNKYSNYDTDVFLPI 285
Query: 61 LETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRN 117
+ I +++G +PY F ++ +DT+YR+++D+ R +T A+ D P+ + LR
Sbjct: 286 FDKIREITGVRPYTGKFGNEDKDGIDTAYRVIADHVRTLTFAICDGGVPNNEGRGYVLRR 345
Query: 118 VVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNL 177
++R G ++L + E +++PEI ++ IL EE F
Sbjct: 346 ILRRGSRYVRKYMNYPIGGFFQQLVDVVIEQNKEIFPEISSGAQDLKEILNEEELSFA-- 403
Query: 178 RKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDT 237
K L + + EQ+ I+ ++ P T +SG + LYDT
Sbjct: 404 --------KTLDRGEKLFEQYAII---------------ASKTPEQT-LSGKDVWRLYDT 439
Query: 238 YGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHF------ 291
YG ++ + +A L + E FE+ E +E SK + + +D+
Sbjct: 440 YGFPVDLTRLMAEEAGLKIDEEGFERAKEESREASKGSGTKDGKTLVKLDVHALSELDQN 499
Query: 292 ---PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDS 348
P T+D++K Y + +VGI G + +DS
Sbjct: 500 DAIPKTNDEFK-----------YGLENVKAKVVGIYDGSKF----------------VDS 532
Query: 349 IQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFG 408
I+ + + G++ DKT YA GGQ D G + ++ N + + G ++H G
Sbjct: 533 IE-DPSIQYGILLDKTPFYAEQGGQEYDTGKLVIDGKSEFN----VANVQVYAGYVLHTG 587
Query: 409 NVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDEC 467
N+V K+ G D R HT +H+LN ALR VL QK V ++
Sbjct: 588 NIVDG-KLNVGDEIIATYDELRRWPIRNNHTGTHILNFALREVLGDGVDQKGSLVAPEKL 646
Query: 468 ALDFSVYGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDD 527
DFS + + ++ + +E N I + +V + + ++ + L + GE YPD
Sbjct: 647 RFDFS-HKQAVTAKELEKIEAISNKYIKNNDKVYYKDVSLTKAKEINGLRAVFGETYPDP 705
Query: 528 VILIDI--------SDKENV----ISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIK 575
V ++ I +D N IS E C GTHV TG I+ +I G+R I
Sbjct: 706 VRVVSIGVSVDDLLADPTNTKWHEISIEFCGGTHVAKTGDIKDLVIIEESGIAKGIRRIV 765
Query: 576 CLTGESS 582
+TG +
Sbjct: 766 AVTGHDA 772
>sp|Q5AQL1|SYA_EMENI Alanine--tRNA ligase OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=ala1 PE=3 SV=2
Length = 961
Score = 213 bits (542), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 178/655 (27%), Positives = 294/655 (44%), Gaps = 107/655 (16%)
Query: 1 DRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPL 60
D +++EIWN VFI + R + ++ L ++DTG+GFERLV++LQ+K+S YDTD+F P+
Sbjct: 213 DDPNVLEIWNNVFIQYNRENDGSLRSLPNKHVDTGMGFERLVSVLQDKSSNYDTDVFGPI 272
Query: 61 LETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRN 117
+TI+ ++GA+ Y F T + +DT+YR+++D+ R + A++D + P+ + +R
Sbjct: 273 FQTIQVITGAREYQGRFGTDDSDGIDTAYRVVADHVRTLMFAISDGVVPNNEGRGYVIRR 332
Query: 118 VVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNL 177
V+R + F V+ G ++ + E LGD++PE++ + IL EE F
Sbjct: 333 VLRRGARYARKYFNVEIGSFFSKIVPTVVEQLGDMFPELKQKQQDVIEILNEEEISFA-- 390
Query: 178 RKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDT 237
K L + + + EQ+ Q A+ ++ G + LYDT
Sbjct: 391 --------KTLDRGERQFEQY----------------AQQAKTAGDHKLHGADVWRLYDT 426
Query: 238 YGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA--KAASNVPDIDLMDLKHF---- 291
+G ++ + +A + L + FE+ ++ KE SK K + +D+ DL
Sbjct: 427 FGFPVDLTRIMAEERGLEIDDRQFEEARHKAKEASKGQKKTTTGSVKLDVHDLGKLEKMN 486
Query: 292 --PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSI 349
P TDD K++ IG+ I AI H ++ S +
Sbjct: 487 GVPKTDDSAKFE-----------------------IGNVTAQI--KAIYHGKTFHS-STQ 520
Query: 350 QLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGN 409
L+ + +G+I D+TN YA GGQ +D G + + +E+ ++ G ++H G
Sbjct: 521 NLDDSEQIGIILDRTNFYAEQGGQENDTGRIVIDGQAE----LEVVDVQQYAGYVLHTGY 576
Query: 410 V-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDEC 467
+ SFKV T E D R HT +H+LN ALR VL QK V +++
Sbjct: 577 MKYGSFKVDD--TVICEYDELRRWPIRNNHTGTHILNFALRGVLGDGIEQKGSLVSAEKL 634
Query: 468 ALDFSVYGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDD 527
DFS V+ V +E I V + + S ++ + + GE YPD
Sbjct: 635 RFDFSHKSPVTDVELV-KIEDLSTQYIRRNCLVYSKEVPLSIARNIAGVRAVFGETYPDP 693
Query: 528 VILIDISDK-----ENV-------ISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIK 575
V ++ + + +NV S E C GTHV TG I+ ++ G+R I
Sbjct: 694 VRVVSVGAELDEILKNVEDPRWADFSIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRII 753
Query: 576 CLTGE-----------------------SSKAAVENGKQLSAAVKQLAATINQNS 607
+TGE S A +N KQ+ + QL+ + Q S
Sbjct: 754 AVTGEDAHEVQRLAEEFEKRLNHLEAMPSGSAKEQNAKQIQVELNQLSISAVQKS 808
>sp|O34526|SYA_BACSU Alanine--tRNA ligase OS=Bacillus subtilis (strain 168) GN=alaS PE=3
SV=1
Length = 878
Score = 203 bits (517), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 181/654 (27%), Positives = 301/654 (46%), Gaps = 106/654 (16%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF T PL K IDTG+G ER+V+++QN + +DTDLF+P+++ E
Sbjct: 199 LEVWNLVFSEFNHNPDGTYTPLPKKNIDTGMGLERMVSVIQNVPTNFDTDLFVPIIKATE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
+SG + YG+ DT++++++D+ R + A++D P N R +L
Sbjct: 259 SISG-ETYGKDNVK------DTAFKVIADHIRTVAFAVSDGALPS------NEGRGYVLR 305
Query: 126 SEDVFKVKQGKLVK-------ELSYNIAEILGDVYPEIQDSINKI-QLILGEESRIFDNL 177
V+ K + +L +AEI+ D YPE+++ + I ++I EE R + L
Sbjct: 306 RLLRRAVRYAKTINIHRPFMFDLVPVVAEIMADFYPEVKEKADFIAKVIKTEEERFHETL 365
Query: 178 RKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDT 237
+ GL + + + K+ +D + ISG F LYDT
Sbjct: 366 NE-------------------------GLAILSEMIKKE--KDKGSSVISGADVFKLYDT 398
Query: 238 YGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDK 297
YG + +E A + +T+ HE FE+++N+ +ER++ + D+ M ++ +
Sbjct: 399 YGFPVELTEEYAEDENMTVDHEGFEEEMNQQRERAR----NARQDVGSMQVQGGALR--- 451
Query: 298 YKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWV 357
D ++ Y+ D N++ V D I A G S+
Sbjct: 452 ---DVTVESTFVGYSQTKADANII-------VLLQDGQLIEEAHEGESVQ---------- 491
Query: 358 GLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGEL-ASLEGKIVHFGNVVSSFKV 416
+I D+T YA +GGQI D G YL + E V I ++ + G+ VH G VV S V
Sbjct: 492 -IILDETPFYAESGGQIGDKG--YLRS---EQAVVRIKDVQKAPNGQHVHEG-VVESGTV 544
Query: 417 TPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYG 475
GL EV+ MR G ++ HT +HLL+ AL+ VL T Q V + DFS +G
Sbjct: 545 QKGLHVTAEVEDHMRSGVIKNHTATHLLHQALKDVLGTHVNQAGSLVTENRLRFDFSHFG 604
Query: 476 ETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISD 535
+ ++ + + +E+ +N+ I + V +E + + + GE Y D V ++ + D
Sbjct: 605 Q-VTKEELEQIERIVNEKIWASIPVSIDLKPIAEAKEMGAMALF-GEKYGDIVRVVQVGD 662
Query: 536 KENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAA 595
S E C G HV NT I ++ G R I+ +TG+ A VE Q+S
Sbjct: 663 ----YSLELCGGCHVRNTAEIGLFKIVSESGIGAGTRRIEAVTGQG--AYVEMNSQIS-V 715
Query: 596 VKQLAATINQNSEQTDEETLNQQNHEIKTLRELLEDDLPYAVHKQNDHLLAELS 649
+KQ A + N + + + L+ L+D ++N+ LLA+L
Sbjct: 716 LKQTADELKTN--------IKEVPKRVAALQAELKD-----AQRENESLLAKLG 756
>sp|O67323|SYA_AQUAE Alanine--tRNA ligase OS=Aquifex aeolicus (strain VF5) GN=alaS PE=1
SV=1
Length = 867
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 185/659 (28%), Positives = 297/659 (45%), Gaps = 111/659 (16%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+EIWN+VF+ + R + PL IDTG+G ER+ ++LQ K S ++ D+ PL++ E
Sbjct: 191 LEIWNLVFMQYNRDENGVLTPLPHPNIDTGMGLERIASVLQGKNSNFEIDIIFPLIQFGE 250
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA 122
+VSG K YG F T D + R+++D+ R IT A++D + P + +R ++R A
Sbjct: 251 EVSGKK-YGEKFET------DVALRVIADHLRAITFAISDGVIPSNEGRGYVIRRILRRA 303
Query: 123 LLIS-----EDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLIL-GEESRIFDN 176
+ E+ F K LV +I+ + YPE++ S ++ I+ GEE R
Sbjct: 304 MRFGYKLGIENPFLYKGVDLV-------VDIMKEPYPELELSREFVKGIVKGEEKRFIKT 356
Query: 177 LRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK--QLARDPSITEISGDMAFTL 234
L+ G++Y+ + Q A + +SG FT
Sbjct: 357 LKA-----------------------------GMEYIQEVIQKALEEGRKTLSGKEVFTA 387
Query: 235 YDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVT 294
YDTYG ++I E+A K L + E F+ +L E +ER++ KHF V
Sbjct: 388 YDTYGFPVDLIDEIAREKGLGIDLEGFQCELEEQRERAR---------------KHFKVE 432
Query: 295 DDKYKYDY-HYDTNSKRYTFPC-----LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDS 348
K K Y H K F ++ +VG+V G+ + ++ G
Sbjct: 433 AKKVKPVYSHLKELGKTSAFVGYEHMEWESQVVGLVKGEGLVS----ELKEGEEGE---- 484
Query: 349 IQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFG 408
++ +T Y GGQI D G+ + + KVE + + EG IVH G
Sbjct: 485 ----------VVLKETPFYPEGGGQIGDAGI---IESDKALFKVEDTQKPT-EGIIVHIG 530
Query: 409 NVV-SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQKSCRVFSDE- 466
V+ + KV G T VD R MR HT +HLL+AALR VL +++ + +D+
Sbjct: 531 KVLKGTLKV--GDTVHARVDKERRWDIMRNHTATHLLHAALRNVLGEHVRQAGSLVADKY 588
Query: 467 CALDFSVYGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPD 526
DF+ + L+ + + VE+ +N+ I + + V+ M E + + E Y +
Sbjct: 589 LRFDFTHFS-ALTEEELKRVEELVNEKIRENLPVNVMEMAYDEALKTGAIAIFE-EKYGE 646
Query: 527 DVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESS-KAA 585
V +I + S+E C GTHV TG I +I S GVR I TG S + A
Sbjct: 647 RVRVISCGE----FSKELCGGTHVSATGDIGYFKIISESSVGAGVRRIVAQTGRWSVETA 702
Query: 586 VENGKQLSAAVKQLAATINQNSEQTDE--ETLNQQNHEIKTLR-ELLEDDLPYAVHKQN 641
+ + L A L + ++ +E E + + EI+ L+ ELL+ + V ++N
Sbjct: 703 FKEHQTLKKASSALGVGEEEVIQKIEELKEEIKDREREIQRLKQELLKLQIREVVKEEN 761
>sp|P61702|SYA_LACJO Alanine--tRNA ligase OS=Lactobacillus johnsonii (strain CNCM
I-12250 / La1 / NCC 533) GN=alaS PE=3 SV=1
Length = 882
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 179/654 (27%), Positives = 301/654 (46%), Gaps = 102/654 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+EIWNIVF + V IDTG+G ER+V+I+Q+ + ++TDLF+P+++ E
Sbjct: 200 LEIWNIVFSQFNHLPNGKYVDQPHKNIDTGMGLERVVSIIQDAPTNFETDLFMPIIKETE 259
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA 122
K+S K Y +N+ D D ++++++D+ R ++ A+AD P + + LR ++R A
Sbjct: 260 KLSDGKKY-----AANKED-DVAFKIIADHVRAVSFAIADGALPSNSGRGYVLRRLIRRA 313
Query: 123 LLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAV 182
L + + +G + +L + EI+ YPE+ D IQ ++ E
Sbjct: 314 DLNGQRL--GIKGAFLYKLVPVVGEIMKSHYPEVVDQQAFIQKVIKNEE----------- 360
Query: 183 KEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSK 242
E+F + GL L + + A+ ISG AF L+DTYG
Sbjct: 361 -------------ERFQVTLSSGLNLLDNIIAE--AKKSDDKTISGKDAFKLFDTYGFPY 405
Query: 243 NIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY 302
+ E A L + + F++++ KER++ KA N+ + D+ + D K ++
Sbjct: 406 ELTFEAAQDAGLKIDKKGFDEEMKAQKERAR-KARGNLQSMGSQDVTLMNIKD---KSEF 461
Query: 303 HYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFD 362
Y T +++ L+ IV+ D++ +DK HA LIFD
Sbjct: 462 EYGTLEEKH------AKLIDIVVDDKL--VDKADGEHAT-----------------LIFD 496
Query: 363 KTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLE----GKIVHFGNVVSSFKVTP 418
KT YA GGQ+ D G +NG++ + + ++ + +HF +V+ +
Sbjct: 497 KTPFYAERGGQVADHG-----EILNQNGEL-VARVTDVQHAPNDQNLHFVDVI--LPLEK 548
Query: 419 GLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGET 477
G ++VD + R G HT +HLL+AALR VL T T+Q V D DF+ E
Sbjct: 549 GQEYVLKVDQKRRRGLKHNHTATHLLHAALREVLGTHTHQAGSLVEPDYLRFDFTSL-EP 607
Query: 478 LSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKE 537
++ +A+VEK +N+ I +++ V + L + GE Y D V ++ I D
Sbjct: 608 MTKKEIASVEKLVNEKIWEEIPVKTTVTDPDTGLKMGALALF-GEKYGDTVRVVQIDD-- 664
Query: 538 NVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG-ESSKAAVENGKQLSAAV 596
S E C GTH NT I ++ + G R I +TG E+ K + + L
Sbjct: 665 --FSTEFCGGTHCENTDQIGMLKIVSESAVGAGTRRIIAVTGPEAYKYVTDRDEILKEVQ 722
Query: 597 KQLAATINQNSEQTDEETLNQQNHEIKTLRELLEDDLPYAVHKQNDHLLAELSK 650
++ AT E+ +N+ + +EDDL A K+ + L A+++K
Sbjct: 723 DEVKAT-------KAEDVVNKISS--------IEDDL-RASQKEAEQLKAQINK 760
>sp|Q045P6|SYA_LACGA Alanine--tRNA ligase OS=Lactobacillus gasseri (strain ATCC 33323 /
DSM 20243) GN=alaS PE=3 SV=1
Length = 882
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 172/633 (27%), Positives = 287/633 (45%), Gaps = 89/633 (14%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+EIWNIVF + V IDTG+G ER+V+I+Q+ + ++TDLF+P+++ E
Sbjct: 200 LEIWNIVFSQFNHLPNGKYVDQPHKNIDTGMGLERVVSIIQDAPTNFETDLFMPIIKETE 259
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA 122
K+S K Y +N+ D D ++++++D+ R ++ A+AD P + + LR ++R A
Sbjct: 260 KLSDGKKY-----AANKED-DVAFKIIADHVRAVSFAIADGALPSNSGRGYVLRRLIRRA 313
Query: 123 LLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAV 182
L + + +G + +L + EI+ YPE+ D IQ ++ E
Sbjct: 314 DLNGQRL--GIKGAFLYKLVPVVGEIMKSHYPEVVDQQAFIQKVIKNEE----------- 360
Query: 183 KEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSK 242
E+F + GL L + + A+ +SG AF L+DTYG
Sbjct: 361 -------------ERFQVTLSSGLNLLDNIIAE--AKKSDDKTVSGKDAFKLFDTYGFPY 405
Query: 243 NIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY 302
+ E A L + + F++++ KER++ KA N+ + D+ + D K ++
Sbjct: 406 ELTFEAAQDAGLKVDKKGFDEEMKAQKERAR-KARGNLQSMGSQDVTLMNIKD---KSEF 461
Query: 303 HYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFD 362
Y T +++ L+ IV+ D++ +DK HA LIFD
Sbjct: 462 EYGTLEEKH------AKLIDIVVNDKL--VDKADGEHAT-----------------LIFD 496
Query: 363 KTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLE----GKIVHFGNVVSSFKVTP 418
KT YA GGQ+ D G +NG++ + + ++ + +HF +++ +
Sbjct: 497 KTPFYAERGGQVADHG-----EILNQNGEL-VARVTDVQHAPNDQNLHFVDII--LPLEK 548
Query: 419 GLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGET 477
G ++VD + R G HT +HLL+AALR VL T T+Q V D DF+ E
Sbjct: 549 GQEYILKVDQKRRRGLKHNHTATHLLHAALREVLGTHTHQAGSLVEPDYLRFDFTSL-EP 607
Query: 478 LSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKE 537
++ +A VEK +N+ I +++ V + L + GE Y D V ++ I D
Sbjct: 608 MTKKEIANVEKIVNEKIWEEIPVKTTVTDPDTGLKMGALALF-GEKYGDTVRVVQIDD-- 664
Query: 538 NVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENG----KQLS 593
S E C GTH NT I ++ + G R I +TG + V + K++
Sbjct: 665 --FSTEFCGGTHCENTDQIGMLKIVSESAVGAGTRRIIAVTGPEAYKYVTDRDEILKEVQ 722
Query: 594 AAVKQLAATINQNSEQTDEETLNQQNHEIKTLR 626
VK A N + EE L E + L+
Sbjct: 723 DEVKATKAEDVTNKISSLEEDLRASQKEAEQLK 755
>sp|Q9XDM3|SYA_AQUPY Alanine--tRNA ligase OS=Aquifex pyrophilus GN=alaS PE=3 SV=1
Length = 871
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 263/581 (45%), Gaps = 83/581 (14%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+EIWN+VF+ + R + PL IDTG+G ER+ ++LQ K S ++ D+ PL+E E
Sbjct: 191 LEIWNLVFMQYNRDENGVLTPLPHPNIDTGMGLERIASVLQGKNSNFEIDIIYPLIEFGE 250
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA 122
+VSG K YG F T D + R+++D+ R IT A++D + P + +R ++R A
Sbjct: 251 EVSGKK-YGEKFET------DVALRVIADHLRAITFAISDGVIPSNEGRGYVIRRILRRA 303
Query: 123 LLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLIL-GEESRIFDNLRKAA 181
+ + + + L K + + +I+ + YPE++ S + ++ I+ GEE R LR
Sbjct: 304 MRFGYQL-GITEPFLYKGIDL-VVDIMKEPYPELELSRDFVKGIVKGEEERFIRTLRSG- 360
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLS 241
+E + E L G K LT G FT YDTYG
Sbjct: 361 -------------MEYIQEVIEKALSEGRKTLT-------------GKEVFTAYDTYGFP 394
Query: 242 KNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDID--LMDLKHFPVTDDKYK 299
++IQE+A K L + E F+ +L E +ER++ ++ LK +T
Sbjct: 395 VDLIQEIAKEKGLEIDLEGFQCELEEQRERARKSFKIETKEVKPVYAHLKELGITSRFVG 454
Query: 300 YDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGL 359
Y+ H + +T ++GI++GD++ K
Sbjct: 455 YE-HLE----------YETEVLGIIVGDEIVSEIKEGEEGEII----------------- 486
Query: 360 IFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPG 419
+T Y GGQI D G+ T + KVE + + EG IVH G ++ K++
Sbjct: 487 -LRETPFYPEGGGQIGDSGI---IETDKGIFKVEDTQRPT-EGIIVHIGKLLKG-KISVK 540
Query: 420 LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQKSCRVFSDE-CALDFSVYGETL 478
VD R MR HT +HLL+AALR +L +++ + +D+ DF+ + L
Sbjct: 541 DIVHARVDKERRWDIMRNHTATHLLHAALRNLLGEHVRQAGSLVADKYLRFDFTHFS-PL 599
Query: 479 SVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKEN 538
+ + + +E+ +N+ I + + V M E + + E Y + V +I +
Sbjct: 600 TEEEIKRIEELVNEKIRENLPVSVMEMAYQEALQTGAIAIFE-EKYGERVRVISCGE--- 655
Query: 539 VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 579
S+E C GTHV TG I +I S GVR I TG
Sbjct: 656 -FSKELCGGTHVSATGDIGYFKIISESSVGAGVRRIVAQTG 695
>sp|A6LMH9|SYA_THEM4 Alanine--tRNA ligase OS=Thermosipho melanesiensis (strain BI429 /
DSM 12029) GN=alaS PE=3 SV=1
Length = 859
Score = 186 bits (471), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 169/595 (28%), Positives = 265/595 (44%), Gaps = 101/595 (16%)
Query: 5 LIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETI 64
+EIWN+VF + + ++PL + IDTG G ER+ ++Q +DTDLFLP++ I
Sbjct: 194 FVEIWNLVFTEYYQDENGQLLPLKRKNIDTGAGLERIAAMMQGVYYNFDTDLFLPIINRI 253
Query: 65 EKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALL 124
V + YGR D S R+++D+ R + ++D +FP N R +L
Sbjct: 254 TDVLNVE-YGRD------EKHDVSIRVIADHIRALVFLISDGVFPS------NEGRGYIL 300
Query: 125 ISEDVFKVKQGKLV---KELSYNIA----EILGDVYPEIQDSINKI-QLILGEESRIFDN 176
+ GK++ K +NI E +G +YPEI + + + ++I GEE R N
Sbjct: 301 RRILRRAARHGKMLGSEKPFLHNIVDAVVEKMGKIYPEIVEKQSFVKEIIYGEEERFLQN 360
Query: 177 LRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYD 236
L K +V I++E G +I G+ AF LYD
Sbjct: 361 LNKGL-----DIVD--------KIVKETG------------------GKIDGEAAFKLYD 389
Query: 237 TYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDD 296
TYG +I+++LA L E F N+ E+ + KA +++ +
Sbjct: 390 TYGFPLDILRDLANENGYILDEEGF----NKYMEQQRKKAREAAGEVEFSE--------- 436
Query: 297 KYKYDYH-YDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNA 355
+ DY D ++K + L TN + I + F + ++ E
Sbjct: 437 --RTDYETLDISTKFVGYDVLSTNARVLKIRTEKFV------------DEVKDVECE--- 479
Query: 356 WVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGEL-ASLEGKIVHFGNVVSSF 414
LI D+T Y GGQ+ D GV +NG+ + + +EG IVH G +
Sbjct: 480 ---LILDETPFYPEKGGQVADKGV-----IKGKNGEFVVTNVYVPVEGIIVHKGKLKGKI 531
Query: 415 KVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSV 473
+V + + VD + R R HT +HLL+AALR+VL T Q V + DF+
Sbjct: 532 RVGDAIFA--SVDEKKRKATARNHTATHLLHAALRKVLGTHVRQAGSLVAPERLRFDFTH 589
Query: 474 YGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDI 533
Y L+ + + +EK +N+ I + + V+ + M E + + E Y D V ++ I
Sbjct: 590 YA-ALTKEEIEKIEKMVNEKILEAIDVNTKVMSYDEAIKNGAMALFE-EKYGDKVRVVRI 647
Query: 534 SDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVEN 588
D S E C GTHV NTG I +I S + GVR I+ +TG +S +EN
Sbjct: 648 RD----FSEELCGGTHVKNTGEIGLFKIISESSVSAGVRRIEAITGFASLTYLEN 698
>sp|A8FFM9|SYA_BACP2 Alanine--tRNA ligase OS=Bacillus pumilus (strain SAFR-032) GN=alaS
PE=3 SV=1
Length = 878
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 169/655 (25%), Positives = 298/655 (45%), Gaps = 106/655 (16%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL K IDTG+G ER+V+++QN + +DTDLF+P++ +E
Sbjct: 199 LEVWNLVFSEFNHNPDGSYTPLPKKNIDTGMGLERMVSVIQNVPTNFDTDLFMPIIRAVE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
+SG + YG T + DT++++++D+ R + A++D P N R +L
Sbjct: 259 TISG-ESYGET------KEKDTAFKVIADHIRTVAFAVSDGALPS------NEGRGYVLR 305
Query: 126 SEDVFKVKQGKLVK-------ELSYNIAEILGDVYPEIQDSINKI-QLILGEESRIFDNL 177
V+ K + +L +AEI+ D YP++Q I ++I EE R + L
Sbjct: 306 RLLRRAVRYAKTIHIHRPFMFDLVPVVAEIMKDFYPDVQAKEEFIAKVIKNEEERFHETL 365
Query: 178 RKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDT 237
+ GL + + + K+ RD ++ISG+ F LYDT
Sbjct: 366 NE-------------------------GLAILSEVIKKE--RDKGSSQISGEDVFKLYDT 398
Query: 238 YGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDK 297
YG + +E A + +T+ E F+ ++ K+R +A+ A D+ M ++ + D K
Sbjct: 399 YGFPVELTEEYAEDEHMTVDREGFQAEME--KQRERARNARQ--DVGSMQVQGGALGDIK 454
Query: 298 YKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWV 357
+ + +G + H I ++G + + V
Sbjct: 455 VESTF----------------------VGYENLTAVAHMIELLQNGEIVS--EAHEGDTV 490
Query: 358 GLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELA-SLEGKIVHFGNVVSSFKV 416
++ D+T YA +GGQ+ D G ++I ++ + G+ VH G VVS
Sbjct: 491 QILLDETPFYAESGGQVADKGTLKSAEVI-----IDIKDVKKAPNGQHVHEGVVVSG-TA 544
Query: 417 TPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYG 475
GL EV++ +R G ++ HT +HLL+ AL+ VL + Q V + DFS +G
Sbjct: 545 KKGLVVTAEVESALRKGIVKNHTATHLLHQALKDVLGSHVNQAGSLVNENRLRFDFSHFG 604
Query: 476 ETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISD 535
+ ++ + ++ +EK +N+ I + + V +E + + + GE Y D V ++ + D
Sbjct: 605 Q-VTKEELSQIEKIVNEKIWEGISVAIDLKPIAEAKEMGAMALF-GEKYGDIVRVVQVGD 662
Query: 536 KENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAA 595
S E C G HV NT I + G R I+ +TG K A E
Sbjct: 663 ----YSIELCGGCHVQNTAEIGLFKIASESGIGAGTRRIEAVTG---KGAYEELNDQLGI 715
Query: 596 VKQLAATINQNSEQTDEETLNQQNHEIKTLRELLEDDLPYAVHKQNDHLLAELSK 650
++Q A+ + N++ + I +L+ L++ V ++N+ LLA+LS+
Sbjct: 716 LEQAASELKSNTKDVPK--------RIASLQADLKE-----VQRENESLLAKLSQ 757
>sp|Q5FLW6|SYA_LACAC Alanine--tRNA ligase OS=Lactobacillus acidophilus (strain ATCC
700396 / NCK56 / N2 / NCFM) GN=alaS PE=3 SV=1
Length = 879
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 164/595 (27%), Positives = 279/595 (46%), Gaps = 98/595 (16%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+EIWNIVF + + V IDTG+G ER+++ILQ+ + ++TDLFLP++ E
Sbjct: 199 LEIWNIVFSQYNHLPNGKYVDQPHKNIDTGMGLERVLSILQDAPTNFETDLFLPIIHATE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA 122
+++ K YG N D T++++++D+ R ++ A+AD P + + LR ++R A
Sbjct: 259 EMTDGKKYGE-----NDEDT-TAFKIIADHVRAVSFAIADGALPSNSGRGYVLRRLIRRA 312
Query: 123 LLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAV 182
L + + +G + +L + +I+ YPEI D I+ ++
Sbjct: 313 DLNGQRL--GIKGAFLYKLVPVVGKIMESHYPEIMDQRGFIENVI--------------- 355
Query: 183 KEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSK 242
Q E E+F + GL L + K A++ ISG AF ++DTYG
Sbjct: 356 ---------QNEEERFQSTLDTGLTLLDDLIEK--AKNSDDKTISGKDAFKMFDTYGFPY 404
Query: 243 NIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVP-----DIDLMDLKHFPVTDDK 297
+ E A L + + F+ ++ K+R++ KA ++ D+ LM++K DK
Sbjct: 405 ELTFESAQDAGLKVDKKGFDAEMQAQKDRAR-KARGDLQSMGRQDVTLMNIK------DK 457
Query: 298 YKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWV 357
+++Y Y P L+ IV+ D++ +DK HA
Sbjct: 458 SEFEYGV------YEEPH--AKLIDIVVDDKL--VDKANGEHAT---------------- 491
Query: 358 GLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLE----GKIVHFGNVVSS 413
L+FDKT YA GGQ+ D G Y ++G++ + ++ ++ + +HF +++
Sbjct: 492 -LVFDKTPFYAERGGQVADHGGIY-----NQDGEL-VAKVTDVQHAPNDQNLHFVDLI-- 542
Query: 414 FKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFS 472
+ G +++D R G +H+ +HLL+AALR+VL T+Q V D DF+
Sbjct: 543 LPMEKGQEYVLKIDKERREGLRHSHSATHLLHAALRQVLGEHTHQAGSLVDPDYLRFDFT 602
Query: 473 VYGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILID 532
E ++ + +VE+ +N I D +QV E + L + G+ Y D V ++
Sbjct: 603 AM-EPMTPRELKSVEELVNQKIWDAIQVKTTITTPEEGEKMGALALFDGK-YGDKVRVVQ 660
Query: 533 ISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVE 587
+SD S E C GTHV NT I + + G+R I+ +T SK A E
Sbjct: 661 MSD----FSSEFCGGTHVDNTDQIGIFKITSESAVGAGMRRIEAVT---SKKAYE 708
>sp|Q23122|SYAM_CAEEL Alanine--tRNA ligase, mitochondrial OS=Caenorhabditis elegans
GN=aars-1 PE=1 SV=2
Length = 793
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 161/591 (27%), Positives = 264/591 (44%), Gaps = 73/591 (12%)
Query: 3 NDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLE 62
+ ++EIWNIVF+S R S I L KN+IDTG+GFERL++++QNKTS +DTD+F P+LE
Sbjct: 219 DSVVEIWNIVFMSSVRDSCGQIRHLGKNHIDTGMGFERLLSVVQNKTSNFDTDVFTPILE 278
Query: 63 TIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVV 119
+++ + +T S + D ++R+++D+ R TVA++D PD T +R ++
Sbjct: 279 KTSELAK-----KQYTGSLDSRQDATFRLVADHIRAATVAISDGAVPDGTGCGFIVRKMM 333
Query: 120 RDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRK 179
R A L +++ + EL +A + +VYPEI D+ I+ I +E F
Sbjct: 334 RRAFLQGISKLGIERYAM-SELVPVVASTMKEVYPEIHDTSTHIRKIFNDEEAQF----- 387
Query: 180 AAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYG 239
WK + K K + +A + ISG AF L++T+G
Sbjct: 388 -----WKTVDK-------------------AKKMFDSVAAESKSPIISGRKAFNLFETHG 423
Query: 240 LSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYK 299
L + ELA + FE+ E ++ S+ + +P + FP DK K
Sbjct: 424 LPLAVTVELARNIGREVDETEFERCRLEAQKVSQKASQFKLP----ISADDFPSHSDKEK 479
Query: 300 YDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGL 359
Y Y + + +Y FP + T ++ + Q + LE N L
Sbjct: 480 YSYVF--RNGKYEFPQVKTRILQVYKDQQ------------------KAESLEANDRGFL 519
Query: 360 IFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPG 419
+ ++ Y GGQ D G +L +E +VE + + V FG + +
Sbjct: 520 VLEECQFYGEQGGQTSDTG--HLLIDGREVFEVENAKKIAGGAVTVLFGRAL--LPIRRD 575
Query: 420 LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLS 479
L ++D R G MRAH+ +HLLN AL+++ + QK V D D+S E LS
Sbjct: 576 LRVEQKLDETRREGVMRAHSATHLLNWALQKLGVGSGQKGSSVDCDRFRFDYSTGDEDLS 635
Query: 480 VDS----VAAVEKYINDVIADQVQVDRRHMRASELPSLTHLT--VIPGEIYPDDVILIDI 533
+ + E + + I + + E + +L V I V ++ +
Sbjct: 636 KEQRTELLIKCEMKMREFIQNGGFTEIIETSLEEAKKIENLQSDVKEDRIGGASVRVVAL 695
Query: 534 SDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKA 584
+V E C GTH+ + I+ ++ KS +R I LTG+ + A
Sbjct: 696 GSGADV-PVECCSGTHIHDVRVIDDVAIMSDKSMGQRLRRIIVLTGKEAAA 745
>sp|B2V709|SYA_SULSY Alanine--tRNA ligase OS=Sulfurihydrogenibium sp. (strain YO3AOP1)
GN=alaS PE=3 SV=1
Length = 876
Score = 179 bits (454), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 176/642 (27%), Positives = 281/642 (43%), Gaps = 102/642 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+EIWN+VF+ + R + PL IDTG+G ER+ ++LQ S YDTDLF P+++ E
Sbjct: 199 LEIWNLVFMQYNRDEKGVLHPLPNPSIDTGMGLERIASVLQGVDSNYDTDLFKPIIQFAE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
+VSG K YG+ N D D + R+++D+ R IT ++D + P R V ++
Sbjct: 259 EVSG-KEYGK-----NEKD-DIAMRVIADHLRAITFLISDGVLPANEG--RGYVLRRIIR 309
Query: 126 SEDVFKVKQGKLVKELSYN----IAEILGDVYPEIQDSINKIQLIL-GEESRIFDNLRKA 180
+ G + K Y + E + YPE+ + + I+ I EE + L+++
Sbjct: 310 RALRYGKNLG-IEKPFLYEGVDVVIEKMKTAYPELIQNRSFIKTITKSEEEKFIKTLKRS 368
Query: 181 AVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGL 240
+ + Y + AR + ++G+ F LYDTYG
Sbjct: 369 ---------------------------MDILYQMIEQARKENRRHLTGEETFKLYDTYGF 401
Query: 241 SKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDID--LMDLKHFPVTDDKY 298
++++E+ + T F L E KER++ S +I + LK+ +
Sbjct: 402 PIDLMEEILKDEGFTFDLIEFHNLLEEQKERARKSWKSQSKEIKPVYLTLKNKLPENQFV 461
Query: 299 KYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVG 358
Y+ NSK ++ I+ GDQ+ + A+ G I+
Sbjct: 462 GYETLTSENSK----------VLAIIKGDQL-------VDTAKEGEDIE----------- 493
Query: 359 LIFDKTNLYATAGGQIDDIGV----AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSF 414
++ D T Y GGQI D G+ +L V +G IVH G V+
Sbjct: 494 IVLDITPFYPEKGGQIGDRGIIEGDEFLFEVLDTQTPV--------DGLIVHKGKVLFG- 544
Query: 415 KVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQKSCRVFSDE-CALDFSV 473
V G R + D R MR HT +HLL+AALR VL +++ + SDE DF+
Sbjct: 545 SVKEGAYVRAKTDKERRENIMRHHTATHLLHAALRNVLGDHVKQAGSLVSDEYLRFDFTH 604
Query: 474 YGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDI 533
+ E+++ + + AVE+ +N I +V + M+ E + + E Y D V +I
Sbjct: 605 F-ESMTDEELKAVEELVNREIMKNEEVVCQEMQYEEALKSGAMAIFE-EKYADVVRVISA 662
Query: 534 SDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLS 593
IS+E C GTHV TG I ++ + + G R I+ + G AVE G Q
Sbjct: 663 G-----ISKELCGGTHVKRTGDIGYFKILSESAVSSGTRRIEAVAG---IKAVEKGLQEH 714
Query: 594 AAVKQLAATINQNSEQTDEETLNQQNH------EIKTLRELL 629
+K L+ + +Q + L QN EI+ LR+ L
Sbjct: 715 YIIKDLSRLLTAKEDQLLDRVLKLQNQIKEKEREIENLRKKL 756
>sp|A7GT67|SYA_BACCN Alanine--tRNA ligase OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=alaS PE=3 SV=1
Length = 880
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 165/613 (26%), Positives = 273/613 (44%), Gaps = 96/613 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL K IDTG+G ER+ +I+QN + +DTDLF+P++ E
Sbjct: 199 LEVWNLVFSQFNHNPDGSYTPLPKKNIDTGMGLERMTSIVQNVPTNFDTDLFMPMIGATE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
+SG K S + D ++++++D+ R +T A+ D P N R +L
Sbjct: 259 SISGEK------YRSGDAEKDMAFKVIADHIRTVTFAVGDGALPS------NEGRGYVLR 306
Query: 126 SEDVFKVKQGK-------LVKELSYNIAEILGDVYPEI---QDSINKIQLILGEESRIFD 175
V+ K + EL + E++ D YPE+ +D I K+ + EE R +
Sbjct: 307 RLLRRAVRYAKKLNMNRPFMYELVPVVGEVMKDFYPEVLEKKDFIAKV--VKNEEERFHE 364
Query: 176 NLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLY 235
L G + + + K A++ T ISG AF LY
Sbjct: 365 TLHD-------------------------GEAILAEVIAK--AKEEKTTVISGVDAFRLY 397
Query: 236 DTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTD 295
DTYG + +E A +T+ H FE ++ K+R +A+AA D+D M ++ + +
Sbjct: 398 DTYGFPVELTEEYAEEAGMTVDHAGFEAEME--KQRERARAARQ--DVDSMQVQGGVLGE 453
Query: 296 DKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNA 355
K ++ Y ++N+V +V ++G DS+Q
Sbjct: 454 IKVASEF------VGYGTVATESNVVALV----------------KNGEYTDSLQAGEEG 491
Query: 356 WVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGEL-ASLEGKIVHFGNVVSSF 414
L+ D T YA +GGQI D G YL + KV + ++ + G+ +H VV
Sbjct: 492 Q--LMLDVTPFYAESGGQIADSG--YLLT---DGVKVLVKDVQKAPNGQNLH-KVVVEEG 543
Query: 415 KVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSV 473
+T T + +D + R ++ HT +HLL+ AL+ VL T Q V ++ DFS
Sbjct: 544 VLTKDATVKAVIDTKNRSSIVKNHTATHLLHQALKDVLGTHVNQAGSLVTAERLRFDFSH 603
Query: 474 YGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDI 533
+G+ + D + +E+ +N+ I + + V+ E + + + GE Y D V ++ +
Sbjct: 604 FGQ-VQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALF-GEKYGDVVRVVQV 661
Query: 534 SDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLS 593
D S E C G HV NT I ++ G R I+ +TG KAA E
Sbjct: 662 GD----YSLELCGGCHVDNTASIGIFKIVAESGIGAGTRRIEAVTG---KAAYELMNDQV 714
Query: 594 AAVKQLAATINQN 606
+ +K+ A + N
Sbjct: 715 SLLKEAAGKMKTN 727
>sp|Q048Z3|SYA_LACDB Alanine--tRNA ligase OS=Lactobacillus delbrueckii subsp. bulgaricus
(strain ATCC BAA-365) GN=alaS PE=3 SV=1
Length = 877
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 172/604 (28%), Positives = 273/604 (45%), Gaps = 85/604 (14%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+EIWNIVF + + V IDTG+G ER+++ILQ+ + ++TDLFLP++ E
Sbjct: 200 LEIWNIVFSEFNHLPDGSYVEQPHKNIDTGMGLERVLSILQDAPTNFETDLFLPIIHATE 259
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
++S K YG +N+ D D S+++++D+ R I+ A+ D P T R V LL
Sbjct: 260 EMSAGKKYG-----ANKAD-DISFKIIADHIRAISFAIGDGALPGNTG--RGYVLRRLLR 311
Query: 126 SEDVFKVKQGKLVKELSYNIAEILGDV----YPEIQDSINKIQLILGEESRIFDNLRKAA 181
+ K G + Y + ++GD+ YPE+ D I S++ N
Sbjct: 312 RAALNGRKLG-IDGAFLYKLVPVVGDIMKSHYPEVSDQAEFI-------SKVVKN----- 358
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLS 241
E ++F E GL L + K A + ISG AF ++DTYG
Sbjct: 359 ------------EEDRFGATLEAGLTLLDDLIDK--AENSEDKTISGKDAFKMFDTYGFP 404
Query: 242 KNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYD 301
+ E A K L + + F+ ++ KER++ KA N+ + D + DK ++
Sbjct: 405 YELTVEAAEDKGLKVDKDGFDAEMEAQKERAR-KARGNLQSMGSQDETLMKIK-DKSVFE 462
Query: 302 YH-YDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLI 360
Y Y+ S+ LV I++ D++ +DK A LI
Sbjct: 463 YGVYEEESQ----------LVDIIVDDKL--VDKADGEKAT-----------------LI 493
Query: 361 FDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGL 420
FDKT YA GGQ+ D G Y V++ + + +HF +VV + G
Sbjct: 494 FDKTPFYAERGGQVADHGDIYDQEGNLVARVVDVQHAPNDQN--LHFVDVV--LPLVKGQ 549
Query: 421 TSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLS 479
T ++++D R G +H+ +HLL+AALR+VL T+Q V D DF+ + ++
Sbjct: 550 TYKLKIDRARREGLRHSHSATHLLHAALRQVLGEHTHQAGSVVEPDYLRFDFTSL-DPIT 608
Query: 480 VDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKENV 539
+ VEK +N+ I + +QV + L + G+ Y D V ++ + D
Sbjct: 609 PRELKNVEKIVNEKIWEAIQVKTTETDPETGKKMGALALFDGK-YTDKVRVVQMDD---- 663
Query: 540 ISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAAVKQL 599
S E C GTH NT I +I ++ GVR I+ +T SK A E S + Q+
Sbjct: 664 FSIEFCGGTHCDNTSQIGVFKIISEQAIGAGVRRIEAVT---SKLAYEYLAGRSDILDQI 720
Query: 600 AATI 603
A +
Sbjct: 721 QAQV 724
>sp|Q1G947|SYA_LACDA Alanine--tRNA ligase OS=Lactobacillus delbrueckii subsp. bulgaricus
(strain ATCC 11842 / DSM 20081) GN=alaS PE=3 SV=2
Length = 877
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 172/604 (28%), Positives = 273/604 (45%), Gaps = 85/604 (14%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+EIWNIVF + + V IDTG+G ER+++ILQ+ + ++TDLFLP++ E
Sbjct: 200 LEIWNIVFSEFNHLPDGSYVEQPHKNIDTGMGLERVLSILQDAPTNFETDLFLPIIHATE 259
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
++S K YG +N+ D D S+++++D+ R I+ A+ D P T R V LL
Sbjct: 260 EMSAGKKYG-----ANKAD-DISFKIIADHIRAISFAIGDGALPGNTG--RGYVLRRLLR 311
Query: 126 SEDVFKVKQGKLVKELSYNIAEILGDV----YPEIQDSINKIQLILGEESRIFDNLRKAA 181
+ K G + Y + ++GD+ YPE+ D I S++ N
Sbjct: 312 RAALNGRKLG-IDGAFLYKLVPVVGDIMKSHYPEVSDQAEFI-------SKVVKN----- 358
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLS 241
E ++F E GL L + K A + ISG AF ++DTYG
Sbjct: 359 ------------EEDRFGATLEAGLTLLDDLIDK--AENSEDKTISGKDAFKMFDTYGFP 404
Query: 242 KNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYD 301
+ E A K L + + F+ ++ KER++ KA N+ + D + DK ++
Sbjct: 405 YELTVEAAEDKGLKVDKDGFDAEMEAQKERAR-KARGNLQSMGSQDETLMKIK-DKSVFE 462
Query: 302 YH-YDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLI 360
Y Y+ S+ LV I++ D++ +DK A LI
Sbjct: 463 YGVYEEESQ----------LVDIIVDDKL--VDKADGEKAT-----------------LI 493
Query: 361 FDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGL 420
FDKT YA GGQ+ D G Y V++ + + +HF +VV + G
Sbjct: 494 FDKTPFYAERGGQVADHGDIYDQEGNLVARVVDVQHAPNDQN--LHFVDVV--LPLVKGQ 549
Query: 421 TSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLS 479
T ++++D R G +H+ +HLL+AALR+VL T+Q V D DF+ + ++
Sbjct: 550 TYKLKIDRARREGLRHSHSATHLLHAALRQVLGEHTHQAGSVVEPDYLRFDFTSL-DPIT 608
Query: 480 VDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKENV 539
+ VEK +N+ I + +QV + L + G+ Y D V ++ + D
Sbjct: 609 PRELKNVEKIVNEKIWEAIQVKTTETDPETGKKMGALALFDGK-YTDKVRVVQMDD---- 663
Query: 540 ISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAAVKQL 599
S E C GTH NT I +I ++ GVR I+ +T SK A E S + Q+
Sbjct: 664 FSIEFCGGTHCDNTSQIGVFKIISEQAIGAGVRRIEAVT---SKLAYEYLAGRSDILDQI 720
Query: 600 AATI 603
A +
Sbjct: 721 QAQV 724
>sp|A7GZA4|SYA_CAMC5 Alanine--tRNA ligase OS=Campylobacter curvus (strain 525.92)
GN=alaS PE=3 SV=1
Length = 852
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 170/644 (26%), Positives = 287/644 (44%), Gaps = 86/644 (13%)
Query: 1 DRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPL 60
D + +EIWN+VF+ ++R + + PL K IDTG+G ER+ I++ K S YD+ LF+PL
Sbjct: 191 DGDRFLEIWNLVFMQYERSADGKLSPLPKPSIDTGMGLERVTAIMEGKFSNYDSSLFMPL 250
Query: 61 LETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVR 120
++ + K+ G KPY D SYR++SD+ R +T LA D R
Sbjct: 251 IDEVAKLCG-KPY--------SYDSGASYRVISDHIRSVTFLLAQGTTFDKEG------R 295
Query: 121 DALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKA 180
+L ++ G L LG P + ++K+ ++G + N +KA
Sbjct: 296 GYVLRRILRRAIRHGYL-----------LGIKEPFMYKLVDKVCEMMGGH-YTYLNEKKA 343
Query: 181 AVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGL 240
AVKE Q LE+ + + G++ ++LA+ I SG+ AF LYDTYG
Sbjct: 344 AVKE-------QVRLEEERFLAT--IASGLELFNEELAKTKEI--FSGETAFKLYDTYGF 392
Query: 241 SKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKY 300
++ ++ K L + F++ ++E K R+KA + D K + K+
Sbjct: 393 PLDLTADMLREKGLKVDEAKFDELMSEQKARAKAAWKGSGDKSSKGDFKQLLEEFGENKF 452
Query: 301 DYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLI 360
+ + + LD D +++ R+G S WV +
Sbjct: 453 SGYDELERQSKILALLDN--------------DFKRVQNLRAGES---------GWV--M 487
Query: 361 FDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLE-GKIVHFGNVVSSFKVTPG 419
FD T YA +GGQ D G + K L+ +E GK + G+V+ + KV+
Sbjct: 488 FDVTPFYAQSGGQTGDTGEITGVGKVLDTQKFHGLNLSQVEVGKQIKTGDVL-NLKVS-- 544
Query: 420 LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETL 478
DAR + R H+ +HLL+AALR++L T Q V +D DFS + + L
Sbjct: 545 -------DARAEIA--RHHSATHLLHAALRKILGTHVAQAGSNVEADRLRFDFS-HPKAL 594
Query: 479 SVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKEN 538
+ + + +EK++ND +A M E + + GE Y ++V ++ + +
Sbjct: 595 TSEELEMIEKFVNDAVASSAAAKTEIMDI-EAAKNSGAIALFGEKYAENVRVLSLGN--- 650
Query: 539 VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAAVKQ 598
+S+E C GTHV N I + + + GVR I+ + S+AA+ + + + +
Sbjct: 651 -VSKELCGGTHVKNVSEIGAFFITKESGVSAGVRRIEAVC---SRAALNLARGFRSELAE 706
Query: 599 LAATINQNSEQTDEETLNQQNHEIKTLRELLEDDLPYAVHKQND 642
++ + N + L + E+K + + D A ND
Sbjct: 707 ISNELKTNEPMVAIKKLKGEVRELKDKLKNIGDSHAIAFTSIND 750
>sp|Q817Z0|SYA_BACCR Alanine--tRNA ligase OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=alaS PE=3 SV=1
Length = 880
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 159/589 (26%), Positives = 265/589 (44%), Gaps = 93/589 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL K IDTG+G ER+ +I+Q+ + +DTDLF+P++ E
Sbjct: 199 LEVWNLVFSQFNHNPDGSYTPLPKKNIDTGMGLERMTSIVQDVPTNFDTDLFMPMIGATE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
+SG K + + D ++++++D+ R +T A+ D P N R +L
Sbjct: 259 TISGEK------YRNGDLEKDMAFKVIADHIRTVTFAVGDGALPS------NEGRGYVLR 306
Query: 126 SEDVFKVKQGK-------LVKELSYNIAEILGDVYPEI---QDSINKIQLILGEESRIFD 175
V+ K + EL + E++ D YPE+ +D I K+ + EE R +
Sbjct: 307 RLLRRAVRYSKKLNINRPFMFELVPVVGEVMKDFYPEVLEKKDFIAKV--VKNEEERFHE 364
Query: 176 NLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLY 235
L G + + + K A++ T ISG AF LY
Sbjct: 365 TLHD-------------------------GEAILAEVIAK--AKEEKTTVISGVDAFRLY 397
Query: 236 DTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTD 295
DTYG + +E A +T+ HE FE ++ K+R +A+AA D+D M ++ + +
Sbjct: 398 DTYGFPIELTEEYAEEAGMTVDHEGFENEME--KQRERARAARQ--DVDSMQVQGGVLGE 453
Query: 296 DKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNA 355
K ++ Y ++N+V +V ++G DS+Q
Sbjct: 454 IKVASEF------VGYGTVATESNVVALV----------------KNGEYTDSLQAGEEG 491
Query: 356 WVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGEL-ASLEGKIVHFGNVVSSF 414
LI D T YA +GGQI D G YL + KV + ++ + G+ +H VV
Sbjct: 492 Q--LILDVTPFYAESGGQIADRG--YL---LADGVKVLVKDVQKAPNGQNLH-KVVVEEG 543
Query: 415 KVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSV 473
+T + +D + R ++ HT +HLL+ AL+ VL T Q V S+ DFS
Sbjct: 544 TLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGSLVTSERLRFDFSH 603
Query: 474 YGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDI 533
+G+ + D + +E+ +N+ I + + V+ E + + + GE Y D V ++ +
Sbjct: 604 FGQ-VQADELEKIERMVNEKIWESIDVEISQKAIEEAKEMGAMALF-GEKYGDVVRVVQV 661
Query: 534 SDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESS 582
D S E C G HV NT I ++ G R I+ +TG+S+
Sbjct: 662 GD----YSLELCGGCHVDNTASIGIFKIVAESGIGAGTRRIEAVTGKSA 706
>sp|Q634F6|SYA_BACCZ Alanine--tRNA ligase OS=Bacillus cereus (strain ZK / E33L) GN=alaS
PE=3 SV=1
Length = 880
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 158/589 (26%), Positives = 266/589 (45%), Gaps = 93/589 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL K IDTG+G ER+ +I+Q+ + +DTDLF+P++ E
Sbjct: 199 LEVWNLVFSQFNHNPDGSYTPLPKKNIDTGMGLERMTSIVQDVPTNFDTDLFMPMIGATE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
+SG K + + D ++++++D+ R +T A+ D P N R +L
Sbjct: 259 TISGEK------YRNGDLEKDMAFKVIADHIRTVTFAVGDGALPS------NEGRGYVLR 306
Query: 126 SEDVFKVKQGK-------LVKELSYNIAEILGDVYPEI---QDSINKIQLILGEESRIFD 175
V+ K + EL + E++ D YPE+ +D I K+ + EE R +
Sbjct: 307 RLLRRAVRYSKKLNINRPFMFELVPVVGEVMKDFYPEVLEKKDFIAKV--VKNEEERFHE 364
Query: 176 NLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLY 235
L G + + + K A++ T ISG AF LY
Sbjct: 365 TLHD-------------------------GEAILAEVIAK--AKEEKTTVISGVDAFRLY 397
Query: 236 DTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTD 295
DTYG + +E A +T+ HE FE ++ K+R +A+AA D+D M ++ + +
Sbjct: 398 DTYGFPIELTEEYAEEAGMTVDHEGFENEME--KQRERARAARQ--DVDSMQVQGGVLGE 453
Query: 296 DKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNA 355
K ++ Y ++N+V +V ++G DS+Q+
Sbjct: 454 VKVASEF------VGYGTVATESNVVALV----------------KNGEYTDSLQVGEEG 491
Query: 356 WVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGEL-ASLEGKIVHFGNVVSSF 414
L+ D T YA +GGQI D G YL + KV + ++ + G+ +H VV
Sbjct: 492 Q--LMLDVTPFYAESGGQIADRG--YL---LADGVKVLVKDVQKAPNGQNLH-KVVVEEG 543
Query: 415 KVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSV 473
+T + +D + R ++ HT +HLL+ AL+ VL T Q V S+ DFS
Sbjct: 544 TLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGSLVTSERLRFDFSH 603
Query: 474 YGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDI 533
+G+ + D + +E+ +N+ I + + V+ E + + + GE Y D V ++ +
Sbjct: 604 FGQ-VQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALF-GEKYGDVVRVVQV 661
Query: 534 SDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESS 582
D S E C G HV NT I ++ G R I+ +TG+S+
Sbjct: 662 GD----YSLELCGGCHVDNTASIGIFKIVAESGIGAGTRRIEAVTGKSA 706
>sp|A0RJ00|SYA_BACAH Alanine--tRNA ligase OS=Bacillus thuringiensis (strain Al Hakam)
GN=alaS PE=3 SV=1
Length = 880
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 158/589 (26%), Positives = 266/589 (45%), Gaps = 93/589 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL K IDTG+G ER+ +I+Q+ + +DTDLF+P++ E
Sbjct: 199 LEVWNLVFSQFNHNPDGSYTPLPKKNIDTGMGLERMTSIVQDVPTNFDTDLFMPMIGATE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
+SG K + + D ++++++D+ R +T A+ D P N R +L
Sbjct: 259 TISGEK------YRNGDLEKDMAFKVIADHIRTVTFAVGDGALPS------NEGRGYVLR 306
Query: 126 SEDVFKVKQGK-------LVKELSYNIAEILGDVYPEI---QDSINKIQLILGEESRIFD 175
V+ K + EL + E++ D YPE+ +D I K+ + EE R +
Sbjct: 307 RLLRRAVRYSKKLNINRPFMFELVPVVGEVMKDFYPEVLEKKDFIAKV--VKNEEERFHE 364
Query: 176 NLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLY 235
L G + + + K A++ T ISG AF LY
Sbjct: 365 TLHD-------------------------GEAILAEVIAK--AKEEKTTVISGVDAFRLY 397
Query: 236 DTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTD 295
DTYG + +E A +T+ HE FE ++ K+R +A+AA D+D M ++ + +
Sbjct: 398 DTYGFPIELTEEYAEEAGMTVDHEGFENEME--KQRERARAARQ--DVDSMQVQGGVLGE 453
Query: 296 DKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNA 355
K ++ Y ++N+V +V ++G DS+Q+
Sbjct: 454 VKVASEF------VGYGTVATESNVVALV----------------KNGEYTDSLQVGEEG 491
Query: 356 WVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGEL-ASLEGKIVHFGNVVSSF 414
L+ D T YA +GGQI D G YL + KV + ++ + G+ +H VV
Sbjct: 492 Q--LMLDVTPFYAESGGQIADRG--YL---LADGVKVLVKDVQKAPNGQNLH-QVVVEEG 543
Query: 415 KVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSV 473
+T + +D + R ++ HT +HLL+ AL+ VL T Q V S+ DFS
Sbjct: 544 TLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGSLVTSERLRFDFSH 603
Query: 474 YGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDI 533
+G+ + D + +E+ +N+ I + + V+ E + + + GE Y D V ++ +
Sbjct: 604 FGQ-VQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALF-GEKYGDVVRVVQV 661
Query: 534 SDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESS 582
D S E C G HV NT I ++ G R I+ +TG+S+
Sbjct: 662 GD----YSLELCGGCHVDNTASIGIFKIVAESGIGAGTRRIEAVTGKSA 706
>sp|Q81LK0|SYA_BACAN Alanine--tRNA ligase OS=Bacillus anthracis GN=alaS PE=3 SV=1
Length = 880
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 156/594 (26%), Positives = 261/594 (43%), Gaps = 103/594 (17%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL K IDTG+G ER+ +I+Q+ + +DTDLF+P++ E
Sbjct: 199 LEVWNLVFSQFNHNPDGSYTPLPKKNIDTGMGLERMTSIVQDVPTNFDTDLFMPMIGATE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
+SG K + + D ++++++D+ R +T A+ D P N R +L
Sbjct: 259 TISGEK------YRNGDLEKDMAFKVIADHIRTVTFAVGDGALPS------NEGRGYVLR 306
Query: 126 SEDVFKVKQGK-------LVKELSYNIAEILGDVYPEI---QDSINKIQLILGEESRIFD 175
V+ K + EL + E++ D YPE+ +D I K+ + EE R +
Sbjct: 307 RLLRRAVRYSKKLNINRPFMFELVPVVGEVMKDFYPEVLEKKDFIAKV--VKNEEERFHE 364
Query: 176 NLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLY 235
L + + K A++ T ISG AF LY
Sbjct: 365 TLHDGEAILSEVIAK---------------------------AKEEKTTVISGVDAFRLY 397
Query: 236 DTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTD 295
DTYG + +E A +T+ HE FE ++ K+R +A+AA D+D M ++ + +
Sbjct: 398 DTYGFPIELTEEYAEEAGMTVDHEGFENEME--KQRERARAARQ--DVDSMQVQGGVLGE 453
Query: 296 DKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNA 355
K ++ Y ++N+V +V ++G DS+Q+
Sbjct: 454 VKVASEF------VGYGTVATESNVVALV----------------KNGEYTDSLQVGEEG 491
Query: 356 WVGLIFDKTNLYATAGGQIDDI------GVAYLTNTTQENGKVEIGELASLEGKIVHFGN 409
L+ D T YA +GGQI D GV L Q+ + G+ +H
Sbjct: 492 Q--LMLDVTPFYAESGGQIADRGCLLADGVKVLVKDVQK----------APNGQNLH-QV 538
Query: 410 VVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECA 468
VV +T + +D + R ++ HT +HLL+ AL+ VL T Q V S+
Sbjct: 539 VVEEGTLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGSLVTSERLR 598
Query: 469 LDFSVYGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDV 528
DFS +G+ + D + +E+ +N+ I + + V+ E + + + GE Y D V
Sbjct: 599 FDFSHFGQ-VQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALF-GEKYGDVV 656
Query: 529 ILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESS 582
++ + D S E C G HV NT I ++ G+R I+ +TG+S+
Sbjct: 657 RVVQVGD----YSLELCGGCHVDNTASIGIFKIVAESGIGAGIRRIEAVTGKSA 706
>sp|Q49Y56|SYA_STAS1 Alanine--tRNA ligase OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=alaS
PE=3 SV=1
Length = 876
Score = 176 bits (446), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 165/648 (25%), Positives = 297/648 (45%), Gaps = 112/648 (17%)
Query: 5 LIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETI 64
+E+WN+VF T PL IDTG+G ER+ ++ QN + Y+TDLF+P++ +
Sbjct: 198 FLEVWNLVFSEFNHNKDHTYTPLPNKNIDTGMGLERMASLAQNVRTNYETDLFMPIIHEV 257
Query: 65 EKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRD 121
EKVSG +T+ ++ + D ++++++D+ R I A+AD P + LR ++R
Sbjct: 258 EKVSG-----KTYLEND--NYDVAFKVIADHIRTIAFAIADGALPANEGRGYVLRRLLRR 310
Query: 122 ALLISEDVFKVKQGKLVKELSYNIAEILGDV----YPEIQDSINKIQLILGEESRIFDNL 177
A+ S+ + + + Y + +I+ D+ YP +++ + I+ ++
Sbjct: 311 AVRFSQSL------DINEPFMYRLVDIVADIMEPYYPNVKEKADFIKRVI---------- 354
Query: 178 RKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSIT-EISGDMAFTLYD 236
+ E E+F+ E GL + L +A+ + T EISG AF LYD
Sbjct: 355 --------------KSEEERFHETLEEGLAI----LNNLVAQAKTSTHEISGKDAFKLYD 396
Query: 237 TYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDD 296
TYG + +E+A + L++ + FE+++ + ++R++ +A N + + +T D
Sbjct: 397 TYGFPVELTEEIATQENLSIDMQTFEEEMQQQRDRAR-QARQNSQSMQVQSEVLKKITTD 455
Query: 297 KYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAW 356
TF D VI D + + A +G +I
Sbjct: 456 S--------------TFVGYDVMDKASVITD--IIQNGELVESAEAGETI---------- 489
Query: 357 VGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELA------SLEGKIVHFGNV 410
I +T YA +GGQ+ D G + EN ++ + E+ +L + FG V
Sbjct: 490 -YFILRETPFYAVSGGQVADQGT-----ISNENFEIAVTEVTKAPNGQNLHKGEIQFGTV 543
Query: 411 VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECAL 469
+ +V+ V+ + R + H+ +HLL+AAL+ VL Q V +D
Sbjct: 544 KKNAEVS------ASVNHKERRSIKKNHSATHLLHAALKEVLGDHVNQAGSLVEADRLRF 597
Query: 470 DFSVYGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVI 529
DFS +G ++ + + VE+ +N+ I + ++VD + M SE L + + GE Y + V
Sbjct: 598 DFSHFG-PMTQEEIDTVERRVNEEIWNSIEVDIQEMPISEAKQLGAMALF-GEKYGEIVR 655
Query: 530 LIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVEN- 588
+++++ S E C G HV NT I ++ GVR I+ LTG+S+ +E
Sbjct: 656 VVNMAP----FSIELCGGIHVNNTAEIGLFKIVSESGTGAGVRRIEALTGKSAFLYLETI 711
Query: 589 GKQLSAAVKQLAATIN----------QNSEQTDEETLNQQNHEIKTLR 626
Q +A Q+ + Q+ E+ + L Q+N E+ +L+
Sbjct: 712 QSQFNAVKSQVKVKSDDQVLEKIVHMQDEEKELTKQLEQKNKEVTSLK 759
>sp|P61700|SYA_DESVH Alanine--tRNA ligase OS=Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB 8303) GN=alaS PE=3
SV=1
Length = 879
Score = 176 bits (446), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 175/689 (25%), Positives = 306/689 (44%), Gaps = 137/689 (19%)
Query: 1 DRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPL 60
D + +EIWN+VF+ + + + PL K IDTG+G ER+ + Q S +DTD+F +
Sbjct: 195 DCDRFLEIWNLVFMQYDQDATGKREPLPKPSIDTGMGLERITAVCQGVFSNFDTDIFQAI 254
Query: 61 LETIEKVSGAKPYGRTFTTSNRTD--LDTSYRMLSDYSRMITVALADNMFPDATAK---L 115
++ ++ S R+D DT+ R+++D+SR I + D + P + L
Sbjct: 255 IQYTCGLA---------NVSYRSDDETDTALRVIADHSRAIAFMITDGILPSNEGRGYVL 305
Query: 116 RNVVRDA-----LLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEE 170
R ++R A L+ D F + + + + +I+GD YPE++++ + + ++ EE
Sbjct: 306 RRLIRRAYRFGRLIGLTDTF-------LHKTALKVVDIMGDDYPELRENSDFMARVVREE 358
Query: 171 SRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLA--RDPSITEISG 228
++FN + GL + L +LA + G
Sbjct: 359 E------------------------DRFNRTLDKGLSM----LEDELATLSASGAAHVPG 390
Query: 229 DMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDL 288
D+AF LYDT+G +I+ ++A + ++ + F+ + E KER+KA A + D+
Sbjct: 391 DIAFRLYDTFGFPLDIVNDIAEKRGFSVDEDGFKALMKEQKERAKA-AWKGSGEKDIAS- 448
Query: 289 KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDS 348
+ P+ ++ + ++ Y C + +V + +D+HA+ +++
Sbjct: 449 RFQPLLEEGMRSEF------IGYDHLCGEGRIVAL--------MDEHAL-------AVER 487
Query: 349 IQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFG 408
+ + L+ ++T Y +GGQ DIG +AS GK+
Sbjct: 488 LAAGQKGY--LVTNRTPFYGASGGQSGDIGT-----------------IASPSGKV---- 524
Query: 409 NVVSSFKVTPGL----TSRVEVDARM------------RLGCMRAHTTSHLLNAALRRVL 452
VV + K +P L VE D + R+ R HT +HLL+AALRRVL
Sbjct: 525 RVVDTIKPSPELVVHHVEAVEGDILLDQEVDLTVTEDDRVASARNHTCTHLLHAALRRVL 584
Query: 453 T-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELP 511
Q V D DF+ + ++ + +AAVE+ +N VI + ++ HM +
Sbjct: 585 GDHVKQAGSLVAPDRLRFDFT-HIAPMTPEELAAVEREVNRVIMADIPLETDHMHYDDAV 643
Query: 512 SLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGV 571
+ + GE Y D+V ++ I+D+ S E C GTH+ TG ++ GV
Sbjct: 644 KRGAMALF-GEKYGDEVRVVAIADE----SVELCGGTHLRATGQAGLFLIVSESGVAAGV 698
Query: 572 RSIKCLTGESSKAAV----ENGKQLSAAVKQLAATINQNSEQTDEETLNQQNHEIKTLRE 627
R I+ LTG ++ AV QLSA +K I E+L ++N +TLR+
Sbjct: 699 RRIEALTGWNAMHAVLAQRSEQAQLSAMLKARPGEIVSRV-----ESLQKEN---RTLRK 750
Query: 628 LLEDDLPYAVHKQNDHLLAELSKNVKLKL 656
+E A Q +++ E + +KL
Sbjct: 751 DMERAAAQATSGQGRNIMDEATDVAGVKL 779
>sp|A1VEQ6|SYA_DESVV Alanine--tRNA ligase OS=Desulfovibrio vulgaris subsp. vulgaris
(strain DP4) GN=alaS PE=3 SV=1
Length = 879
Score = 176 bits (445), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 175/689 (25%), Positives = 306/689 (44%), Gaps = 137/689 (19%)
Query: 1 DRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPL 60
D + +EIWN+VF+ + + + PL K IDTG+G ER+ + Q S +DTD+F +
Sbjct: 195 DCDRFLEIWNLVFMQYDQDATGKREPLPKPSIDTGMGLERITAVCQGVFSNFDTDIFQAI 254
Query: 61 LETIEKVSGAKPYGRTFTTSNRTD--LDTSYRMLSDYSRMITVALADNMFPDATAK---L 115
++ ++ S R+D DT+ R+++D+SR I + D + P + L
Sbjct: 255 IQYTCGLA---------NVSYRSDDETDTALRVIADHSRAIAFMITDGILPSNEGRGYVL 305
Query: 116 RNVVRDA-----LLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEE 170
R ++R A L+ D F + + + + +I+GD YPE++++ + + ++ EE
Sbjct: 306 RRLIRRAYRFGRLIGLTDTF-------LHKTALKVVDIMGDDYPELRENSDFMARVVREE 358
Query: 171 SRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLA--RDPSITEISG 228
++FN + GL + L +LA + G
Sbjct: 359 E------------------------DRFNRTLDKGLSM----LEDELATLSASGAARVPG 390
Query: 229 DMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDL 288
D+AF LYDT+G +I+ ++A + ++ + F+ + E KER+KA A + D+
Sbjct: 391 DIAFRLYDTFGFPLDIVNDIAEKRGFSVDEDGFKALMKEQKERAKA-AWKGSGEKDIAS- 448
Query: 289 KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDS 348
+ P+ ++ + ++ Y C + +V + +D+HA+ +++
Sbjct: 449 RFQPLLEEGMRSEF------IGYDHLCGEGRIVAL--------MDEHAL-------AVER 487
Query: 349 IQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFG 408
+ + L+ ++T Y +GGQ DIG +AS GK+
Sbjct: 488 LAAGQKGY--LVTNRTPFYGASGGQSGDIGT-----------------IASPSGKV---- 524
Query: 409 NVVSSFKVTPGL----TSRVEVDARM------------RLGCMRAHTTSHLLNAALRRVL 452
VV + K +P L VE D + R+ R HT +HLL+AALRRVL
Sbjct: 525 RVVDTIKPSPELVVHHVEAVEGDILLDQEVDLTVTEDDRVASARNHTCTHLLHAALRRVL 584
Query: 453 T-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELP 511
Q V D DF+ + ++ + +AAVE+ +N VI + ++ HM +
Sbjct: 585 GDHVKQAGSLVAPDRLRFDFT-HIAPMTPEELAAVEREVNRVIMADIPLETDHMHYDDAV 643
Query: 512 SLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGV 571
+ + GE Y D+V ++ I+D+ S E C GTH+ TG ++ GV
Sbjct: 644 KRGAMALF-GEKYGDEVRVVAIADE----SVELCGGTHLRATGQAGLFLIVSESGVAAGV 698
Query: 572 RSIKCLTGESSKAAV----ENGKQLSAAVKQLAATINQNSEQTDEETLNQQNHEIKTLRE 627
R I+ LTG ++ AV QLSA +K I E+L ++N +TLR+
Sbjct: 699 RRIEALTGWNAMHAVLAQRSEQAQLSAMLKARPGEIVSRV-----ESLQKEN---RTLRK 750
Query: 628 LLEDDLPYAVHKQNDHLLAELSKNVKLKL 656
+E A Q +++ E + +KL
Sbjct: 751 DMERAAAQATSGQGRNIMDEATDVAGVKL 779
>sp|P61697|SYA_BACC1 Alanine--tRNA ligase OS=Bacillus cereus (strain ATCC 10987) GN=alaS
PE=3 SV=1
Length = 880
Score = 176 bits (445), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 158/589 (26%), Positives = 265/589 (44%), Gaps = 93/589 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL K IDTG+G ER+ +I+Q+ + +DTDLF+P++ E
Sbjct: 199 LEVWNLVFSQFNHNPDGSYTPLPKKNIDTGMGLERMTSIVQDVPTNFDTDLFMPMIGATE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
+SG K + + D ++++++D+ R +T A+ D P N R +L
Sbjct: 259 TISGEK------YRNGDLEKDMAFKVIADHIRTVTFAVGDGALPS------NEGRGYVLR 306
Query: 126 SEDVFKVKQGK-------LVKELSYNIAEILGDVYPEI---QDSINKIQLILGEESRIFD 175
V+ K + EL + E++ D YPE+ +D I K+ + EE R +
Sbjct: 307 RLLRRAVRYSKKLNINRPFMFELVPVVGEVMKDFYPEVLEKKDFIAKV--VKNEEERFHE 364
Query: 176 NLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLY 235
L G + + + K A++ T ISG AF LY
Sbjct: 365 TLHD-------------------------GEAILAEVIAK--AKEEKTTVISGVDAFRLY 397
Query: 236 DTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTD 295
DTYG + +E A +T+ HE FE ++ K+R +A+AA D+D M ++ + +
Sbjct: 398 DTYGFPIELTEEYAEEAGMTVDHEGFENEME--KQRERARAARQ--DVDSMQVQGGVLGE 453
Query: 296 DKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNA 355
K ++ Y ++N+V +V ++G DS+Q
Sbjct: 454 VKVASEF------VGYGTVATESNVVALV----------------KNGEYADSLQAGEEG 491
Query: 356 WVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGEL-ASLEGKIVHFGNVVSSF 414
L+ D T YA +GGQI D G YL + KV + ++ + G+ +H VV
Sbjct: 492 Q--LMLDVTPFYAESGGQIADRG--YL---LADGVKVLVKDVQKAPNGQNLH-KVVVEEG 543
Query: 415 KVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSV 473
+T + +D + R ++ HT +HLL+ AL+ VL T Q V S+ DFS
Sbjct: 544 TLTKDAAVKAIIDTKNRSSVVKNHTATHLLHQALKDVLGTHVNQAGSLVTSERLRFDFSH 603
Query: 474 YGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDI 533
+G+ + D + +E+ +N+ I + + V+ E + + + GE Y D V ++ +
Sbjct: 604 FGQ-VQADELEKIERIVNEKIWESIDVEISQKAIEEAKEMGAMALF-GEKYGDVVRVVQV 661
Query: 534 SDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESS 582
D S E C G HV NT I ++ G R I+ +TG+S+
Sbjct: 662 GD----YSLELCGGCHVDNTASIGIFKIVAESGIGAGTRRIEAVTGKSA 706
>sp|A9BJE0|SYA_PETMO Alanine--tRNA ligase OS=Petrotoga mobilis (strain DSM 10674 / SJ95)
GN=alaS PE=3 SV=1
Length = 876
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 164/642 (25%), Positives = 285/642 (44%), Gaps = 99/642 (15%)
Query: 1 DRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPL 60
D +EIWNIVF + + PL + IDTG GFER+ + Q K +D+DLF +
Sbjct: 194 DCGRFVEIWNIVFTEYYSDENGNLSPLPRKNIDTGAGFERICAVTQGKYDNFDSDLFKEI 253
Query: 61 LETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRN 117
+E I+++ G K F + D+ S ++++D+SR I +++ + P + LR
Sbjct: 254 IEEIQRIFGVK-----FRVNKSKDV--SIKVIADHSRAIAFLISEGIIPSNEGRGYVLRR 306
Query: 118 VVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLI----LGEESRI 173
++R A + +G + + + + +G +YPE+ I K LI EE +
Sbjct: 307 LIRRA--VRHGALLEAKGPFLSSILETVIKKMGKIYPEL---IEKEALIKDISFMEEEKF 361
Query: 174 FDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFT 233
F+ + K G++ L + + T + G +AF
Sbjct: 362 FETMEK-----------------------------GMERLNNIIQNLNNETTLPGKIAFE 392
Query: 234 LYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDID-----LMDL 288
LYDTYG ++ +E+ + K + + + F + +N K+R A++AS + D ++
Sbjct: 393 LYDTYGFPLDLTKEILSEKGIEVDEKEFTELMN--KQREMARSASGKVEYDTEKQIYKEI 450
Query: 289 KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDS 348
F + YD T + I+ G+ + + A+ G I+
Sbjct: 451 DKFLTPTEFIGYDKLSSTEEVQL-----------IIKGNSI-------VPQAQEGDEIE- 491
Query: 349 IQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFG 408
L F KT YA GGQ+ D GV Y E + E+ + + +I+
Sbjct: 492 ----------LFFPKTPFYAERGGQVSDKGVIY-----NETFEAEVIHVKPIRNEIISHL 536
Query: 409 NVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDEC 467
+ + G ++VD + R + HT +HLL++ALR+V+ Q V +
Sbjct: 537 VKIKKGSIKNGERVFLKVDEKKRKATEKNHTATHLLHSALRKVIGEHIRQAGSYVAPERL 596
Query: 468 ALDFSVYGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDD 527
DF+ Y E L+ D + +E IN+ I + V+ ++++ E + + E Y +
Sbjct: 597 RFDFTHY-EPLTQDQIKQIEYLINEQIQKAIPVNI-YLKSLEEAKSMDVIALFEEKYGEV 654
Query: 528 VILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG-ESSKAAV 586
V +++I D SRE C GTHV NTG I ++ S + GVR I+ +TG ES A
Sbjct: 655 VRIVEIDD----FSRELCGGTHVSNTGEIGLFKILEESSISSGVRRIEAITGFESLNYAT 710
Query: 587 ENGKQLSAAVKQLAATINQNSEQTDE--ETLNQQNHEIKTLR 626
E ++ K L ++ +Q ++ + +T+ Q EIK L+
Sbjct: 711 ELESIMTNLSKMLDSSRDQIPDKIEGILKTIKNQEKEIKQLQ 752
>sp|Q8NW87|SYA_STAAW Alanine--tRNA ligase OS=Staphylococcus aureus (strain MW2) GN=alaS
PE=3 SV=1
Length = 876
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 166/639 (25%), Positives = 290/639 (45%), Gaps = 96/639 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL IDTG+G ER+ ++ QN + Y+TDLF+P++ IE
Sbjct: 199 LEVWNLVFSEFNHNKDHSYTPLPNKNIDTGMGLERMASVSQNVRTNYETDLFMPIMNEIE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
KVS G+ + +N D+ ++++++D+ R I A++D P + R V LL
Sbjct: 259 KVS-----GKQYLVNNEQDV--AFKVIADHIRTIAFAISDGALP--ANEGRGYVLRRLLR 309
Query: 126 SEDVFKVKQGKLVKELSYNIAEILGDV----YPEIQDSINKIQLILGEESRIFDNLRKAA 181
F G + + Y + +I+ D+ YP +++ + I+ ++
Sbjct: 310 RAVRFSQTLG-INEPFMYKLVDIVADIMEPYYPNVKEKADFIKRVI-------------- 354
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLS 241
+ E E+F+ E GL + + + K A + EI+G AF LYDTYG
Sbjct: 355 ----------KSEEERFHETLEDGLAILNELIKKAKA---TTNEINGKDAFKLYDTYGFP 401
Query: 242 KNIIQELAAAKKLTLCHEAFEQKLNELKERSK-AKAASNVPDIDLMDLKHFPVTDDKYKY 300
+ +E+A L + FE ++ + ++R++ A+ S + LK+
Sbjct: 402 IELTEEIAVQAGLKVDMTTFESEMQQQRDRARQARQNSQSMQVQSEVLKNITSASTFVG- 460
Query: 301 DYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLI 360
YDT + + T L N G++V Q+E V +
Sbjct: 461 ---YDTATAQTTLTHLIYN------GEEV-------------------SQVEAGETVYFM 492
Query: 361 FDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELA-SLEGKIVHFGNVVSSFKVTPG 419
+T YA +GGQ+ D G+ Y +N ++ + E+ + G+ +H G VV +V G
Sbjct: 493 LTETPFYAVSGGQVADTGIVY-----NDNFEIAVSEVTKAPNGQNLHKG-VVQFGQVNVG 546
Query: 420 LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETL 478
T EV+ R + H+ +HLL+AAL+ VL Q V +D DFS +G +
Sbjct: 547 ATVSAEVNQNDRRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFG-PM 605
Query: 479 SVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKEN 538
+ D + VE+ +N+ I + V+ + M + + + + GE Y D V +++++
Sbjct: 606 TNDEIDQVERLVNEEIWKGIDVNIQEMDIASAKEMGAMALF-GEKYGDVVRVVNMAP--- 661
Query: 539 VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVE------NGKQL 592
S E C G HV NT I ++ GVR I+ LTG+++ +E N +
Sbjct: 662 -FSIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAAFLYLEDIQEKFNTMKS 720
Query: 593 SAAVKQLAATINQNSEQTDEE-----TLNQQNHEIKTLR 626
VK +++ ++ DEE L Q++ EI +L+
Sbjct: 721 QLKVKSDDQVVDKLTQLQDEEKALLKQLEQRDKEITSLK 759
>sp|Q6G8V1|SYA_STAAS Alanine--tRNA ligase OS=Staphylococcus aureus (strain MSSA476)
GN=alaS PE=3 SV=1
Length = 876
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 166/639 (25%), Positives = 290/639 (45%), Gaps = 96/639 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL IDTG+G ER+ ++ QN + Y+TDLF+P++ IE
Sbjct: 199 LEVWNLVFSEFNHNKDHSYTPLPNKNIDTGMGLERMASVSQNVRTNYETDLFMPIMNEIE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
KVS G+ + +N D+ ++++++D+ R I A++D P + R V LL
Sbjct: 259 KVS-----GKQYLVNNEQDV--AFKVIADHIRTIAFAISDGALP--ANEGRGYVLRRLLR 309
Query: 126 SEDVFKVKQGKLVKELSYNIAEILGDV----YPEIQDSINKIQLILGEESRIFDNLRKAA 181
F G + + Y + +I+ D+ YP +++ + I+ ++
Sbjct: 310 RAVRFSQTLG-INEPFMYKLVDIVADIMEPYYPNVKEKADFIKRVI-------------- 354
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLS 241
+ E E+F+ E GL + + + K A + EI+G AF LYDTYG
Sbjct: 355 ----------KSEEERFHETLEDGLAILNELIKKAKA---TTNEINGKDAFKLYDTYGFP 401
Query: 242 KNIIQELAAAKKLTLCHEAFEQKLNELKERSK-AKAASNVPDIDLMDLKHFPVTDDKYKY 300
+ +E+A L + FE ++ + ++R++ A+ S + LK+
Sbjct: 402 IELTEEIAVQAGLKVDMTTFESEMQQQRDRARQARQNSQSMQVQSEVLKNITSASTFVG- 460
Query: 301 DYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLI 360
YDT + + T L N G++V Q+E V +
Sbjct: 461 ---YDTATAQTTLTHLIYN------GEEV-------------------SQVEAGETVYFM 492
Query: 361 FDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELA-SLEGKIVHFGNVVSSFKVTPG 419
+T YA +GGQ+ D G+ Y +N ++ + E+ + G+ +H G VV +V G
Sbjct: 493 LTETPFYAVSGGQVADTGIVY-----NDNFEIAVSEVTKAPNGQNLHKG-VVQFGQVNVG 546
Query: 420 LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETL 478
T EV+ R + H+ +HLL+AAL+ VL Q V +D DFS +G +
Sbjct: 547 ATVSAEVNQNDRRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFG-PM 605
Query: 479 SVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKEN 538
+ D + VE+ +N+ I + V+ + M + + + + GE Y D V +++++
Sbjct: 606 TNDEIDQVERLVNEEIWKGIDVNIQEMDIASAKEMGAMALF-GEKYGDVVRVVNMAP--- 661
Query: 539 VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVE------NGKQL 592
S E C G HV NT I ++ GVR I+ LTG+++ +E N +
Sbjct: 662 -FSIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAAFLYLEDIQEKFNTMKS 720
Query: 593 SAAVKQLAATINQNSEQTDEE-----TLNQQNHEIKTLR 626
VK +++ ++ DEE L Q++ EI +L+
Sbjct: 721 QLKVKSDDQVVDKLTQLQDEEKALLKQLEQRDKEITSLK 759
>sp|A8Z4F6|SYA_STAAT Alanine--tRNA ligase OS=Staphylococcus aureus (strain USA300 /
TCH1516) GN=alaS PE=3 SV=1
Length = 877
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 166/639 (25%), Positives = 290/639 (45%), Gaps = 96/639 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL IDTG+G ER+ ++ QN + Y+TDLF+P++ IE
Sbjct: 200 LEVWNLVFSEFNHNKDHSYTPLPNKNIDTGMGLERMASVSQNVRTNYETDLFMPIMNEIE 259
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
KVS G+ + +N D+ ++++++D+ R I A++D P + R V LL
Sbjct: 260 KVS-----GKQYLVNNEQDV--AFKVIADHIRTIAFAISDGALP--ANEGRGYVLRRLLR 310
Query: 126 SEDVFKVKQGKLVKELSYNIAEILGDV----YPEIQDSINKIQLILGEESRIFDNLRKAA 181
F G + + Y + +I+ D+ YP +++ + I+ ++
Sbjct: 311 RAVRFSQTLG-INEPFMYKLVDIVADIMEPYYPNVKEKADFIKRVI-------------- 355
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLS 241
+ E E+F+ E GL + + + K A + EI+G AF LYDTYG
Sbjct: 356 ----------KSEEERFHETLEDGLAILNELIKKAKA---TTNEINGKDAFKLYDTYGFP 402
Query: 242 KNIIQELAAAKKLTLCHEAFEQKLNELKERSK-AKAASNVPDIDLMDLKHFPVTDDKYKY 300
+ +E+A L + FE ++ + ++R++ A+ S + LK+
Sbjct: 403 IELTEEIAVQAGLKVDMTTFESEMQQQRDRARQARQNSQSMQVQSEVLKNITSASTFVG- 461
Query: 301 DYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLI 360
YDT + + T L N G++V Q+E V +
Sbjct: 462 ---YDTATAQTTLTHLIYN------GEEV-------------------SQVEAGETVYFM 493
Query: 361 FDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELA-SLEGKIVHFGNVVSSFKVTPG 419
+T YA +GGQ+ D G+ Y +N ++ + E+ + G+ +H G VV +V G
Sbjct: 494 LTETPFYAISGGQVADTGIVY-----NDNFEIAVSEVTKAPNGQNLHKG-VVQFGQVNVG 547
Query: 420 LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETL 478
T EV+ R + H+ +HLL+AAL+ VL Q V +D DFS +G +
Sbjct: 548 ATVSAEVNQNDRRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFG-PM 606
Query: 479 SVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKEN 538
+ D + VE+ +N+ I + V+ + M + + + + GE Y D V +++++
Sbjct: 607 TNDEIDQVERLVNEEIWKGIDVNIQEMDIASAKEMGAMALF-GEKYGDVVRVVNMAP--- 662
Query: 539 VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVE------NGKQL 592
S E C G HV NT I ++ GVR I+ LTG+++ +E N +
Sbjct: 663 -FSIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAAFLYLEDIQEKFNTMKS 721
Query: 593 SAAVKQLAATINQNSEQTDEE-----TLNQQNHEIKTLR 626
VK +++ ++ DEE L Q++ EI +L+
Sbjct: 722 QLKVKSDDQVVDKLTQLQDEEKALLKQLEQRDKEITSLK 760
>sp|A8YTJ0|SYA_LACH4 Alanine--tRNA ligase OS=Lactobacillus helveticus (strain DPC 4571)
GN=alaS PE=3 SV=1
Length = 879
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 159/595 (26%), Positives = 276/595 (46%), Gaps = 98/595 (16%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+EIWNIVF + + V IDTG+G ER+++ILQ+ + ++TDLFLP++ E
Sbjct: 199 LEIWNIVFSQYNHLPNGKYVDQPHKNIDTGMGLERVLSILQDAPTNFETDLFLPIIHATE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA 122
+++ K YG N+ D T++++++D+ R ++ A+AD P + + LR ++R A
Sbjct: 259 EMTDGKKYG-----ENKEDT-TAFKIIADHVRAVSFAIADGALPSNSGRGYVLRRLIRRA 312
Query: 123 LLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAV 182
L + + +G + +L + +I+ YPE+ D I+ ++
Sbjct: 313 DLHGQRL--GIKGAFLYKLVPVVGKIMQSHYPEVMDQRGFIENVI--------------- 355
Query: 183 KEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSK 242
Q E ++F + GL L + K A+ ISG AF ++DTYG
Sbjct: 356 ---------QNEEKRFQATLDTGLTLLDDLIDK--AKKSDDKTISGKDAFKMFDTYGFPY 404
Query: 243 NIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNV-----PDIDLMDLKHFPVTDDK 297
+ E A L + + F+ ++ KER++ KA ++ D+ LM++K DK
Sbjct: 405 ELTFESAQDAGLKVDKKGFDAEMQAQKERAR-KARGDLQSMGRQDVTLMNIK------DK 457
Query: 298 YKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWV 357
++ R T+ L+ IV+ D++ +DK HA
Sbjct: 458 SVFE--------RDTYEEPHAKLLDIVVDDKL--VDKADGEHAT---------------- 491
Query: 358 GLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLE----GKIVHFGNVVSS 413
L+FDKT YA GGQ+ D G N ++G++ + ++ ++ + +HF +++
Sbjct: 492 -LVFDKTPFYAERGGQVADHG-----NIYDQDGEL-VAKVTDVQHAPNNQNLHFVDLI-- 542
Query: 414 FKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFS 472
+ G +++D R G +H+ +HLL+AALR+VL T+Q V D DF+
Sbjct: 543 LPMEKGKEYVLKIDKERREGLRHSHSATHLLHAALRQVLGEHTHQAGSLVDPDYLRFDFT 602
Query: 473 VYGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILID 532
E ++ + +VE+ +N I + + V E + L + G+ Y D V ++
Sbjct: 603 AM-EPMTPREIKSVEELVNQKIWEAIDVKTTITTPEEGEKMGALALFDGK-YGDKVRVVQ 660
Query: 533 ISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVE 587
+ D S E C GTH NT I +I + G+R I+ +T SK A E
Sbjct: 661 MGD----FSSEFCGGTHCSNTNQIGIFKIISESAVGAGMRRIEAVT---SKKAYE 708
>sp|A6QHF9|SYA_STAAE Alanine--tRNA ligase OS=Staphylococcus aureus (strain Newman)
GN=alaS PE=3 SV=1
Length = 876
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 166/639 (25%), Positives = 290/639 (45%), Gaps = 96/639 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL IDTG+G ER+ ++ QN + Y+TDLF+P++ IE
Sbjct: 199 LEVWNLVFSEFNHNKDHSYTPLPNKNIDTGMGLERMASVSQNVRTNYETDLFMPIMNEIE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
KVS G+ + +N D+ ++++++D+ R I A++D P + R V LL
Sbjct: 259 KVS-----GKQYLVNNEQDV--AFKVIADHIRTIAFAISDGALP--ANEGRGYVLRRLLR 309
Query: 126 SEDVFKVKQGKLVKELSYNIAEILGDV----YPEIQDSINKIQLILGEESRIFDNLRKAA 181
F G + + Y + +I+ D+ YP +++ + I+ ++
Sbjct: 310 RAVRFSQTLG-INEPFMYKLVDIVADIMEPYYPNVKEKADFIKRVI-------------- 354
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLS 241
+ E E+F+ E GL + + + K A + EI+G AF LYDTYG
Sbjct: 355 ----------KSEEERFHETLEDGLAILNELIKKAKA---TTNEINGKDAFKLYDTYGFP 401
Query: 242 KNIIQELAAAKKLTLCHEAFEQKLNELKERSK-AKAASNVPDIDLMDLKHFPVTDDKYKY 300
+ +E+A L + FE ++ + ++R++ A+ S + LK+
Sbjct: 402 IELTEEIAVQAGLKVDMTTFESEMQQQRDRARQARQNSQSMQVQSEVLKNITSASTFVG- 460
Query: 301 DYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLI 360
YDT + + T L N G++V Q+E V +
Sbjct: 461 ---YDTATAQTTLTHLIYN------GEEV-------------------SQVEAGETVYFM 492
Query: 361 FDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELA-SLEGKIVHFGNVVSSFKVTPG 419
+T YA +GGQ+ D G+ Y +N ++ + E+ + G+ +H G VV +V G
Sbjct: 493 LTETPFYAISGGQVADTGIVY-----NDNFEIAVSEVTKAPNGQNLHKG-VVQFGQVNVG 546
Query: 420 LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETL 478
T EV+ R + H+ +HLL+AAL+ VL Q V +D DFS +G +
Sbjct: 547 ATVSAEVNQNDRRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFG-PM 605
Query: 479 SVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKEN 538
+ D + VE+ +N+ I + V+ + M + + + + GE Y D V +++++
Sbjct: 606 TNDEIDQVERLVNEEIWKGIDVNIQEMDIASAKEMGAMALF-GEKYGDVVRVVNMAP--- 661
Query: 539 VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVE------NGKQL 592
S E C G HV NT I ++ GVR I+ LTG+++ +E N +
Sbjct: 662 -FSIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAAFLYLEDIQEKFNTMKS 720
Query: 593 SAAVKQLAATINQNSEQTDEE-----TLNQQNHEIKTLR 626
VK +++ ++ DEE L Q++ EI +L+
Sbjct: 721 QLKVKSDDQVVDKLTQLQDEEKALLKQLEQRDKEITSLK 759
>sp|Q5HFE4|SYA_STAAC Alanine--tRNA ligase OS=Staphylococcus aureus (strain COL) GN=alaS
PE=3 SV=1
Length = 876
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 166/639 (25%), Positives = 290/639 (45%), Gaps = 96/639 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL IDTG+G ER+ ++ QN + Y+TDLF+P++ IE
Sbjct: 199 LEVWNLVFSEFNHNKDHSYTPLPNKNIDTGMGLERMASVSQNVRTNYETDLFMPIMNEIE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
KVS G+ + +N D+ ++++++D+ R I A++D P + R V LL
Sbjct: 259 KVS-----GKQYLVNNEQDV--AFKVIADHIRTIAFAISDGALP--ANEGRGYVLRRLLR 309
Query: 126 SEDVFKVKQGKLVKELSYNIAEILGDV----YPEIQDSINKIQLILGEESRIFDNLRKAA 181
F G + + Y + +I+ D+ YP +++ + I+ ++
Sbjct: 310 RAVRFSQTLG-INEPFMYKLVDIVADIMEPYYPNVKEKADFIKRVI-------------- 354
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLS 241
+ E E+F+ E GL + + + K A + EI+G AF LYDTYG
Sbjct: 355 ----------KSEEERFHETLEDGLAILNELIKKAKA---TTNEINGKDAFKLYDTYGFP 401
Query: 242 KNIIQELAAAKKLTLCHEAFEQKLNELKERSK-AKAASNVPDIDLMDLKHFPVTDDKYKY 300
+ +E+A L + FE ++ + ++R++ A+ S + LK+
Sbjct: 402 IELTEEIAVQAGLKVDMTTFESEMQQQRDRARQARQNSQSMQVQSEVLKNITSASTFVG- 460
Query: 301 DYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLI 360
YDT + + T L N G++V Q+E V +
Sbjct: 461 ---YDTATAQTTLTHLIYN------GEEV-------------------SQVEAGETVYFM 492
Query: 361 FDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELA-SLEGKIVHFGNVVSSFKVTPG 419
+T YA +GGQ+ D G+ Y +N ++ + E+ + G+ +H G VV +V G
Sbjct: 493 LTETPFYAISGGQVADTGIVY-----NDNFEIAVSEVTKAPNGQNLHKG-VVQFGQVNVG 546
Query: 420 LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETL 478
T EV+ R + H+ +HLL+AAL+ VL Q V +D DFS +G +
Sbjct: 547 ATVSAEVNQNDRRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFG-PM 605
Query: 479 SVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKEN 538
+ D + VE+ +N+ I + V+ + M + + + + GE Y D V +++++
Sbjct: 606 TNDEIDQVERLVNEEIWKGIDVNIQEMDIASAKEMGAMALF-GEKYGDVVRVVNMAP--- 661
Query: 539 VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVE------NGKQL 592
S E C G HV NT I ++ GVR I+ LTG+++ +E N +
Sbjct: 662 -FSIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAAFLYLEDIQEKFNTMKS 720
Query: 593 SAAVKQLAATINQNSEQTDEE-----TLNQQNHEIKTLR 626
VK +++ ++ DEE L Q++ EI +L+
Sbjct: 721 QLKVKSDDQVVDKLTQLQDEEKALLKQLEQRDKEITSLK 759
>sp|Q2FXV9|SYA_STAA8 Alanine--tRNA ligase OS=Staphylococcus aureus (strain NCTC 8325)
GN=alaS PE=3 SV=1
Length = 876
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 166/639 (25%), Positives = 290/639 (45%), Gaps = 96/639 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL IDTG+G ER+ ++ QN + Y+TDLF+P++ IE
Sbjct: 199 LEVWNLVFSEFNHNKDHSYTPLPNKNIDTGMGLERMASVSQNVRTNYETDLFMPIMNEIE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
KVS G+ + +N D+ ++++++D+ R I A++D P + R V LL
Sbjct: 259 KVS-----GKQYLVNNEQDV--AFKVIADHIRTIAFAISDGALP--ANEGRGYVLRRLLR 309
Query: 126 SEDVFKVKQGKLVKELSYNIAEILGDV----YPEIQDSINKIQLILGEESRIFDNLRKAA 181
F G + + Y + +I+ D+ YP +++ + I+ ++
Sbjct: 310 RAVRFSQTLG-INEPFMYKLVDIVADIMEPYYPNVKEKADFIKRVI-------------- 354
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLS 241
+ E E+F+ E GL + + + K A + EI+G AF LYDTYG
Sbjct: 355 ----------KSEEERFHETLEDGLAILNELIKKAKA---TTNEINGKDAFKLYDTYGFP 401
Query: 242 KNIIQELAAAKKLTLCHEAFEQKLNELKERSK-AKAASNVPDIDLMDLKHFPVTDDKYKY 300
+ +E+A L + FE ++ + ++R++ A+ S + LK+
Sbjct: 402 IELTEEIAVQAGLKVDMTTFESEMQQQRDRARQARQNSQSMQVQSEVLKNITSASTFVG- 460
Query: 301 DYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLI 360
YDT + + T L N G++V Q+E V +
Sbjct: 461 ---YDTATAQTTLTHLIYN------GEEV-------------------SQVEAGETVYFM 492
Query: 361 FDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELA-SLEGKIVHFGNVVSSFKVTPG 419
+T YA +GGQ+ D G+ Y +N ++ + E+ + G+ +H G VV +V G
Sbjct: 493 LTETPFYAISGGQVADTGIVY-----NDNFEIAVSEVTKAPNGQNLHKG-VVQFGQVNVG 546
Query: 420 LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETL 478
T EV+ R + H+ +HLL+AAL+ VL Q V +D DFS +G +
Sbjct: 547 ATVSAEVNQNDRRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFG-PM 605
Query: 479 SVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKEN 538
+ D + VE+ +N+ I + V+ + M + + + + GE Y D V +++++
Sbjct: 606 TNDEIDQVERLVNEEIWKGIDVNIQEMDIASAKEMGAMALF-GEKYGDVVRVVNMAP--- 661
Query: 539 VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVE------NGKQL 592
S E C G HV NT I ++ GVR I+ LTG+++ +E N +
Sbjct: 662 -FSIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAAFLYLEDIQEKFNTMKS 720
Query: 593 SAAVKQLAATINQNSEQTDEE-----TLNQQNHEIKTLR 626
VK +++ ++ DEE L Q++ EI +L+
Sbjct: 721 QLKVKSDDQVVDKLTQLQDEEKALLKQLEQRDKEITSLK 759
>sp|Q2FGA8|SYA_STAA3 Alanine--tRNA ligase OS=Staphylococcus aureus (strain USA300)
GN=alaS PE=3 SV=1
Length = 876
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 166/639 (25%), Positives = 290/639 (45%), Gaps = 96/639 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL IDTG+G ER+ ++ QN + Y+TDLF+P++ IE
Sbjct: 199 LEVWNLVFSEFNHNKDHSYTPLPNKNIDTGMGLERMASVSQNVRTNYETDLFMPIMNEIE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
KVS G+ + +N D+ ++++++D+ R I A++D P + R V LL
Sbjct: 259 KVS-----GKQYLVNNEQDV--AFKVIADHIRTIAFAISDGALP--ANEGRGYVLRRLLR 309
Query: 126 SEDVFKVKQGKLVKELSYNIAEILGDV----YPEIQDSINKIQLILGEESRIFDNLRKAA 181
F G + + Y + +I+ D+ YP +++ + I+ ++
Sbjct: 310 RAVRFSQTLG-INEPFMYKLVDIVADIMEPYYPNVKEKADFIKRVI-------------- 354
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLS 241
+ E E+F+ E GL + + + K A + EI+G AF LYDTYG
Sbjct: 355 ----------KSEEERFHETLEDGLAILNELIKKAKA---TTNEINGKDAFKLYDTYGFP 401
Query: 242 KNIIQELAAAKKLTLCHEAFEQKLNELKERSK-AKAASNVPDIDLMDLKHFPVTDDKYKY 300
+ +E+A L + FE ++ + ++R++ A+ S + LK+
Sbjct: 402 IELTEEIAVQAGLKVDMTTFESEMQQQRDRARQARQNSQSMQVQSEVLKNITSASTFVG- 460
Query: 301 DYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLI 360
YDT + + T L N G++V Q+E V +
Sbjct: 461 ---YDTATAQTTLTHLIYN------GEEV-------------------SQVEAGETVYFM 492
Query: 361 FDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELA-SLEGKIVHFGNVVSSFKVTPG 419
+T YA +GGQ+ D G+ Y +N ++ + E+ + G+ +H G VV +V G
Sbjct: 493 LTETPFYAISGGQVADTGIVY-----NDNFEIAVSEVTKAPNGQNLHKG-VVQFGQVNVG 546
Query: 420 LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETL 478
T EV+ R + H+ +HLL+AAL+ VL Q V +D DFS +G +
Sbjct: 547 ATVSAEVNQNDRRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFG-PM 605
Query: 479 SVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKEN 538
+ D + VE+ +N+ I + V+ + M + + + + GE Y D V +++++
Sbjct: 606 TNDEIDQVERLVNEEIWKGIDVNIQEMDIASAKEMGAMALF-GEKYGDVVRVVNMAP--- 661
Query: 539 VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVE------NGKQL 592
S E C G HV NT I ++ GVR I+ LTG+++ +E N +
Sbjct: 662 -FSIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAAFLYLEDIQEKFNTMKS 720
Query: 593 SAAVKQLAATINQNSEQTDEE-----TLNQQNHEIKTLR 626
VK +++ ++ DEE L Q++ EI +L+
Sbjct: 721 QLKVKSDDQVVDKLTQLQDEEKALLKQLEQRDKEITSLK 759
>sp|P67011|SYA_STAAN Alanine--tRNA ligase OS=Staphylococcus aureus (strain N315) GN=alaS
PE=1 SV=1
Length = 876
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 166/639 (25%), Positives = 289/639 (45%), Gaps = 96/639 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL IDTG+G ER+ ++ QN + Y+TDLF+P++ IE
Sbjct: 199 LEVWNLVFSEFNHNKDHSYTPLPNKNIDTGMGLERMASVSQNVRTNYETDLFMPIMNEIE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
KVS G+ + +N D+ ++++++D+ R I A++D P + R V LL
Sbjct: 259 KVS-----GKQYLVNNEQDV--AFKVIADHIRTIAFAISDGALP--ANEGRGYVLRRLLR 309
Query: 126 SEDVFKVKQGKLVKELSYNIAEILGDV----YPEIQDSINKIQLILGEESRIFDNLRKAA 181
F G + + Y + +I+ D+ YP +++ + I+ ++
Sbjct: 310 RAVRFSQTLG-INEPFMYKLVDIVADIMEPYYPNVKEKADFIKRVI-------------- 354
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLS 241
+ E E+F+ E GL + + + K A + EI+G AF LYDTYG
Sbjct: 355 ----------KSEEERFHETLEDGLAILNELIKKAKA---TTNEINGKDAFKLYDTYGFP 401
Query: 242 KNIIQELAAAKKLTLCHEAFEQKLNELKERSK-AKAASNVPDIDLMDLKHFPVTDDKYKY 300
+ +E+A L + FE ++ + ++R++ A+ S + LK+
Sbjct: 402 IELTEEIAVQAGLKVDMTTFESEMQQQRDRARQARQNSQSMQVQSEVLKNITSASTFVG- 460
Query: 301 DYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLI 360
YDT + + T L N G++V Q+E V +
Sbjct: 461 ---YDTATAQTTLTHLIYN------GEEV-------------------SQVEAGETVYFM 492
Query: 361 FDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELA-SLEGKIVHFGNVVSSFKVTPG 419
+T YA +GGQ+ D G+ Y +N ++ + E+ + G+ +H G VV +V G
Sbjct: 493 LTETPFYAVSGGQVADTGIVY-----NDNFEIAVSEVTKAPNGQNLHKG-VVQFGQVNVG 546
Query: 420 LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETL 478
T EV+ R + H+ +HLL+AAL+ VL Q V +D DFS +G +
Sbjct: 547 ATVSAEVNQNDRRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFG-PM 605
Query: 479 SVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKEN 538
+ D + VE+ +N+ I + V+ + M + + + + GE Y D V +++++
Sbjct: 606 TNDEIDQVERLVNEEIWKGIDVNIQEMDIASAKEMGAMALF-GEKYGDVVRVVNMAP--- 661
Query: 539 VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVE------NGKQL 592
S E C G HV NT I ++ GVR I+ LTG+++ +E N +
Sbjct: 662 -FSIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAAFLYLEDIQEKFNTMKS 720
Query: 593 SAAVKQLAATINQNSEQTDEE-----TLNQQNHEIKTLR 626
VK + + ++ DEE L Q++ EI +L+
Sbjct: 721 QMKVKSDDQVVEKLTQLQDEEKALLKQLEQRDKEITSLK 759
>sp|P67010|SYA_STAAM Alanine--tRNA ligase OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=alaS PE=1 SV=1
Length = 876
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 166/639 (25%), Positives = 289/639 (45%), Gaps = 96/639 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL IDTG+G ER+ ++ QN + Y+TDLF+P++ IE
Sbjct: 199 LEVWNLVFSEFNHNKDHSYTPLPNKNIDTGMGLERMASVSQNVRTNYETDLFMPIMNEIE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
KVS G+ + +N D+ ++++++D+ R I A++D P + R V LL
Sbjct: 259 KVS-----GKQYLVNNEQDV--AFKVIADHIRTIAFAISDGALP--ANEGRGYVLRRLLR 309
Query: 126 SEDVFKVKQGKLVKELSYNIAEILGDV----YPEIQDSINKIQLILGEESRIFDNLRKAA 181
F G + + Y + +I+ D+ YP +++ + I+ ++
Sbjct: 310 RAVRFSQTLG-INEPFMYKLVDIVADIMEPYYPNVKEKADFIKRVI-------------- 354
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLS 241
+ E E+F+ E GL + + + K A + EI+G AF LYDTYG
Sbjct: 355 ----------KSEEERFHETLEDGLAILNELIKKAKA---TTNEINGKDAFKLYDTYGFP 401
Query: 242 KNIIQELAAAKKLTLCHEAFEQKLNELKERSK-AKAASNVPDIDLMDLKHFPVTDDKYKY 300
+ +E+A L + FE ++ + ++R++ A+ S + LK+
Sbjct: 402 IELTEEIAVQAGLKVDMTTFESEMQQQRDRARQARQNSQSMQVQSEVLKNITSASTFVG- 460
Query: 301 DYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLI 360
YDT + + T L N G++V Q+E V +
Sbjct: 461 ---YDTATAQTTLTHLIYN------GEEV-------------------SQVEAGETVYFM 492
Query: 361 FDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELA-SLEGKIVHFGNVVSSFKVTPG 419
+T YA +GGQ+ D G+ Y +N ++ + E+ + G+ +H G VV +V G
Sbjct: 493 LTETPFYAVSGGQVADTGIVY-----NDNFEIAVSEVTKAPNGQNLHKG-VVQFGQVNVG 546
Query: 420 LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETL 478
T EV+ R + H+ +HLL+AAL+ VL Q V +D DFS +G +
Sbjct: 547 ATVSAEVNQNDRRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFG-PM 605
Query: 479 SVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKEN 538
+ D + VE+ +N+ I + V+ + M + + + + GE Y D V +++++
Sbjct: 606 TNDEIDQVERLVNEEIWKGIDVNIQEMDIASAKEMGAMALF-GEKYGDVVRVVNMAP--- 661
Query: 539 VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVE------NGKQL 592
S E C G HV NT I ++ GVR I+ LTG+++ +E N +
Sbjct: 662 -FSIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAAFLYLEDIQEKFNTMKS 720
Query: 593 SAAVKQLAATINQNSEQTDEE-----TLNQQNHEIKTLR 626
VK + + ++ DEE L Q++ EI +L+
Sbjct: 721 QMKVKSDDQVVEKLTQLQDEEKALLKQLEQRDKEITSLK 759
>sp|A5ITE3|SYA_STAA9 Alanine--tRNA ligase OS=Staphylococcus aureus (strain JH9) GN=alaS
PE=3 SV=1
Length = 876
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 166/639 (25%), Positives = 289/639 (45%), Gaps = 96/639 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL IDTG+G ER+ ++ QN + Y+TDLF+P++ IE
Sbjct: 199 LEVWNLVFSEFNHNKDHSYTPLPNKNIDTGMGLERMASVSQNVRTNYETDLFMPIMNEIE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
KVS G+ + +N D+ ++++++D+ R I A++D P + R V LL
Sbjct: 259 KVS-----GKQYLVNNEQDV--AFKVIADHIRTIAFAISDGALP--ANEGRGYVLRRLLR 309
Query: 126 SEDVFKVKQGKLVKELSYNIAEILGDV----YPEIQDSINKIQLILGEESRIFDNLRKAA 181
F G + + Y + +I+ D+ YP +++ + I+ ++
Sbjct: 310 RAVRFSQTLG-INEPFMYKLVDIVADIMEPYYPNVKEKADFIKRVI-------------- 354
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLS 241
+ E E+F+ E GL + + + K A + EI+G AF LYDTYG
Sbjct: 355 ----------KSEEERFHETLEDGLAILNELIKKAKA---TTNEINGKDAFKLYDTYGFP 401
Query: 242 KNIIQELAAAKKLTLCHEAFEQKLNELKERSK-AKAASNVPDIDLMDLKHFPVTDDKYKY 300
+ +E+A L + FE ++ + ++R++ A+ S + LK+
Sbjct: 402 IELTEEIAVQAGLKVDMTTFESEMQQQRDRARQARQNSQSMQVQSEVLKNITSASTFVG- 460
Query: 301 DYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLI 360
YDT + + T L N G++V Q+E V +
Sbjct: 461 ---YDTATAQTTLTHLIYN------GEEV-------------------SQVEAGETVYFM 492
Query: 361 FDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELA-SLEGKIVHFGNVVSSFKVTPG 419
+T YA +GGQ+ D G+ Y +N ++ + E+ + G+ +H G VV +V G
Sbjct: 493 LTETPFYAVSGGQVADTGIVY-----NDNFEIAVSEVTKAPNGQNLHKG-VVQFGQVNVG 546
Query: 420 LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETL 478
T EV+ R + H+ +HLL+AAL+ VL Q V +D DFS +G +
Sbjct: 547 ATVSAEVNQNDRRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFG-PM 605
Query: 479 SVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKEN 538
+ D + VE+ +N+ I + V+ + M + + + + GE Y D V +++++
Sbjct: 606 TNDEIDQVERLVNEEIWKGIDVNIQEMDIASAKEMGAMALF-GEKYGDVVRVVNMAP--- 661
Query: 539 VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVE------NGKQL 592
S E C G HV NT I ++ GVR I+ LTG+++ +E N +
Sbjct: 662 -FSIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAAFLYLEDIQEKFNTMKS 720
Query: 593 SAAVKQLAATINQNSEQTDEE-----TLNQQNHEIKTLR 626
VK + + ++ DEE L Q++ EI +L+
Sbjct: 721 QMKVKSDDQVVEKLTQLQDEEKALLKQLEQRDKEITSLK 759
>sp|A6U287|SYA_STAA2 Alanine--tRNA ligase OS=Staphylococcus aureus (strain JH1) GN=alaS
PE=3 SV=1
Length = 876
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 166/639 (25%), Positives = 289/639 (45%), Gaps = 96/639 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL IDTG+G ER+ ++ QN + Y+TDLF+P++ IE
Sbjct: 199 LEVWNLVFSEFNHNKDHSYTPLPNKNIDTGMGLERMASVSQNVRTNYETDLFMPIMNEIE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
KVS G+ + +N D+ ++++++D+ R I A++D P + R V LL
Sbjct: 259 KVS-----GKQYLVNNEQDV--AFKVIADHIRTIAFAISDGALP--ANEGRGYVLRRLLR 309
Query: 126 SEDVFKVKQGKLVKELSYNIAEILGDV----YPEIQDSINKIQLILGEESRIFDNLRKAA 181
F G + + Y + +I+ D+ YP +++ + I+ ++
Sbjct: 310 RAVRFSQTLG-INEPFMYKLVDIVADIMEPYYPNVKEKADFIKRVI-------------- 354
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLS 241
+ E E+F+ E GL + + + K A + EI+G AF LYDTYG
Sbjct: 355 ----------KSEEERFHETLEDGLAILNELIKKAKA---TTNEINGKDAFKLYDTYGFP 401
Query: 242 KNIIQELAAAKKLTLCHEAFEQKLNELKERSK-AKAASNVPDIDLMDLKHFPVTDDKYKY 300
+ +E+A L + FE ++ + ++R++ A+ S + LK+
Sbjct: 402 IELTEEIAVQAGLKVDMTTFESEMQQQRDRARQARQNSQSMQVQSEVLKNITSASTFVG- 460
Query: 301 DYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLI 360
YDT + + T L N G++V Q+E V +
Sbjct: 461 ---YDTATAQTTLTHLIYN------GEEV-------------------SQVEAGETVYFM 492
Query: 361 FDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELA-SLEGKIVHFGNVVSSFKVTPG 419
+T YA +GGQ+ D G+ Y +N ++ + E+ + G+ +H G VV +V G
Sbjct: 493 LTETPFYAVSGGQVADTGIVY-----NDNFEIAVSEVTKAPNGQNLHKG-VVQFGQVNVG 546
Query: 420 LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETL 478
T EV+ R + H+ +HLL+AAL+ VL Q V +D DFS +G +
Sbjct: 547 ATVSAEVNQNDRRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFG-PM 605
Query: 479 SVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKEN 538
+ D + VE+ +N+ I + V+ + M + + + + GE Y D V +++++
Sbjct: 606 TNDEIDQVERLVNEEIWKGIDVNIQEMDIASAKEMGAMALF-GEKYGDVVRVVNMAP--- 661
Query: 539 VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVE------NGKQL 592
S E C G HV NT I ++ GVR I+ LTG+++ +E N +
Sbjct: 662 -FSIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAAFLYLEDIQEKFNTMKS 720
Query: 593 SAAVKQLAATINQNSEQTDEE-----TLNQQNHEIKTLR 626
VK + + ++ DEE L Q++ EI +L+
Sbjct: 721 QMKVKSDDQVVEKLTQLQDEEKALLKQLEQRDKEITSLK 759
>sp|A7X328|SYA_STAA1 Alanine--tRNA ligase OS=Staphylococcus aureus (strain Mu3 / ATCC
700698) GN=alaS PE=3 SV=1
Length = 876
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 166/639 (25%), Positives = 289/639 (45%), Gaps = 96/639 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL IDTG+G ER+ ++ QN + Y+TDLF+P++ IE
Sbjct: 199 LEVWNLVFSEFNHNKDHSYTPLPNKNIDTGMGLERMASVSQNVRTNYETDLFMPIMNEIE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
KVS G+ + +N D+ ++++++D+ R I A++D P + R V LL
Sbjct: 259 KVS-----GKQYLVNNEQDV--AFKVIADHIRTIAFAISDGALP--ANEGRGYVLRRLLR 309
Query: 126 SEDVFKVKQGKLVKELSYNIAEILGDV----YPEIQDSINKIQLILGEESRIFDNLRKAA 181
F G + + Y + +I+ D+ YP +++ + I+ ++
Sbjct: 310 RAVRFSQTLG-INEPFMYKLVDIVADIMEPYYPNVKEKADFIKRVI-------------- 354
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLS 241
+ E E+F+ E GL + + + K A + EI+G AF LYDTYG
Sbjct: 355 ----------KSEEERFHETLEDGLAILNELIKKAKA---TTNEINGKDAFKLYDTYGFP 401
Query: 242 KNIIQELAAAKKLTLCHEAFEQKLNELKERSK-AKAASNVPDIDLMDLKHFPVTDDKYKY 300
+ +E+A L + FE ++ + ++R++ A+ S + LK+
Sbjct: 402 IELTEEIAVQAGLKVDMTTFESEMQQQRDRARQARQNSQSMQVQSEVLKNITSASTFVG- 460
Query: 301 DYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLI 360
YDT + + T L N G++V Q+E V +
Sbjct: 461 ---YDTATAQTTLTHLIYN------GEEV-------------------SQVEAGETVYFM 492
Query: 361 FDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELA-SLEGKIVHFGNVVSSFKVTPG 419
+T YA +GGQ+ D G+ Y +N ++ + E+ + G+ +H G VV +V G
Sbjct: 493 LTETPFYAVSGGQVADTGIVY-----NDNFEIAVSEVTKAPNGQNLHKG-VVQFGQVNVG 546
Query: 420 LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETL 478
T EV+ R + H+ +HLL+AAL+ VL Q V +D DFS +G +
Sbjct: 547 ATVSAEVNQNDRRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFG-PM 605
Query: 479 SVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKEN 538
+ D + VE+ +N+ I + V+ + M + + + + GE Y D V +++++
Sbjct: 606 TNDEIDQVERLVNEEIWKGIDVNIQEMDIASAKEMGAMALF-GEKYGDVVRVVNMAP--- 661
Query: 539 VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVE------NGKQL 592
S E C G HV NT I ++ GVR I+ LTG+++ +E N +
Sbjct: 662 -FSIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAAFLYLEDIQEKFNTMKS 720
Query: 593 SAAVKQLAATINQNSEQTDEE-----TLNQQNHEIKTLR 626
VK + + ++ DEE L Q++ EI +L+
Sbjct: 721 QMKVKSDDQVVEKLTQLQDEEKALLKQLEQRDKEITSLK 759
>sp|Q2YT60|SYA_STAAB Alanine--tRNA ligase OS=Staphylococcus aureus (strain bovine RF122
/ ET3-1) GN=alaS PE=3 SV=1
Length = 876
Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 166/639 (25%), Positives = 289/639 (45%), Gaps = 96/639 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL IDTG+G ER+ ++ QN + Y+TDLF+P++ IE
Sbjct: 199 LEVWNLVFSEFNHNKDHSYTPLPNKNIDTGMGLERMASVSQNVRTNYETDLFMPIMNEIE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
KVS G+ + +N D+ ++++++D+ R I A++D P + R V LL
Sbjct: 259 KVS-----GKQYLVNNEQDV--AFKVIADHIRTIAFAISDGALP--ANEGRGYVLRRLLR 309
Query: 126 SEDVFKVKQGKLVKELSYNIAEILGDV----YPEIQDSINKIQLILGEESRIFDNLRKAA 181
F G + + Y + +I+ D+ YP +++ + I+ ++
Sbjct: 310 RAVRFSQTLG-INEPFMYKLVDIVADIMEPYYPNVKEKADFIKRVI-------------- 354
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLS 241
+ E E+F+ E GL + + + K A + EI+G AF LYDTYG
Sbjct: 355 ----------KSEEERFHETLEDGLAILNELIKKAKA---TTNEINGKDAFKLYDTYGFP 401
Query: 242 KNIIQELAAAKKLTLCHEAFEQKLNELKERSK-AKAASNVPDIDLMDLKHFPVTDDKYKY 300
+ +E+A L + FE ++ + ++R++ A+ S + LK+
Sbjct: 402 IELTEEIAVQAGLKVDMTTFESEMQQQRDRARQARQNSQSMQVQSEVLKNITSASTFVG- 460
Query: 301 DYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLI 360
YDT + + T L N G++V Q+E V +
Sbjct: 461 ---YDTATAQTTLTHLIYN------GEEV-------------------SQVEAGETVYFM 492
Query: 361 FDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELA-SLEGKIVHFGNVVSSFKVTPG 419
+T YA +GGQ+ D G+ Y +N ++ + E+ + G+ +H G V +V G
Sbjct: 493 LTETPFYAVSGGQVADTGIVY-----NDNFEIAVSEVTKAPNGQNLHKG-AVQFGQVNVG 546
Query: 420 LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETL 478
T EV+ R + H+ +HLL+AAL+ VL Q V +D DFS +G +
Sbjct: 547 ATVSAEVNQNDRRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFG-PM 605
Query: 479 SVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKEN 538
+ D + VE+ +N+ I + V+ + M + + + + GE Y D V +++++
Sbjct: 606 TNDEIDQVERLVNEEIWKGIDVNIQEMDIASAKEMGAMALF-GEKYGDVVRVVNMAP--- 661
Query: 539 VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVE------NGKQL 592
S E C G HV NT I ++ GVR I+ LTG+++ +E N +
Sbjct: 662 -FSIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAAFLYLEDIQEKFNTMKS 720
Query: 593 SAAVKQLAATINQNSEQTDEE-----TLNQQNHEIKTLR 626
VK I++ ++ DEE L Q++ EI +L+
Sbjct: 721 QMKVKSDDQVIDKLTQLQDEEKALLKQLEQRDKEITSLK 759
>sp|Q3ATN3|SYA_CHLCH Alanine--tRNA ligase OS=Chlorobium chlorochromatii (strain CaD3)
GN=alaS PE=3 SV=1
Length = 886
Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 161/596 (27%), Positives = 266/596 (44%), Gaps = 96/596 (16%)
Query: 5 LIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETI 64
+IE+WN+VFI + R S + PL K ++DTG+GFER+V ++Q K S YD+D+F PL + I
Sbjct: 195 VIELWNLVFIQYNRQSDGHLEPLPKKHVDTGMGFERIVAVMQGKGSNYDSDVFQPLFDKI 254
Query: 65 EKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALL 124
+++G + YG + N D + R+++D++R +T AL+D P + + R V +L
Sbjct: 255 TEITGVR-YGASLDAPN----DIAMRVIADHARTLTFALSDGAMP--SNEGRGYVLRRIL 307
Query: 125 ISEDVFKVKQG---KLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAA 181
+ G ++ +L +A +G+V+PE+ + I+
Sbjct: 308 RRALRYSRNLGYHQPILHQLVGTLALAMGEVFPELVQRQEAVSAII-------------- 353
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLS 241
+ E E F + + G+ L + + K A + + I+G AF LYDTYG
Sbjct: 354 ----------KAEEESFIVTLDRGIDLFSELVEKLRASNGKV--IAGSDAFRLYDTYGFP 401
Query: 242 KNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYD 301
++ + +AA + + E FE + E K R+++ D + + V DD K+
Sbjct: 402 FDLTRLMAADEGFEVDGEGFEHCMQEQKNRARS---------DRREKQR--VDDDGAKWQ 450
Query: 302 YHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIF 361
+ D + ++ H A+I I+ + N + L+
Sbjct: 451 WFSDVRASQFV-----------------------GYDHLVHSATITGIR-QGNGKLLLVL 486
Query: 362 DKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVH-----FGNVVSSFKV 416
D T YA +GGQ D G +L N+ ++ + + IVH F V S V
Sbjct: 487 DATPFYAESGGQTGDNG--WLENSRY---RLHVADTVKDGDAIVHVVSDAFDKVQDS-AV 540
Query: 417 TPGLTSRVE--------VDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDEC 467
P VE V R R HT +HL++AALRR+L QK V +
Sbjct: 541 QPEDVEIVEQELAVAASVHRTARQDAERNHTATHLMHAALRRILGEHVQQKGSFVSPERL 600
Query: 468 ALDFSVYGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDD 527
DFS + + L+ + + AVE +N I + V + + G+ Y D
Sbjct: 601 RFDFSHFSK-LTDEEIEAVEIAVNTQIREAEPVVKHADVLFDDAVAKGALAFFGDKYADR 659
Query: 528 VILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSK 583
V +++I +S E C GTHV N G I +I S GVR I+ +TG++++
Sbjct: 660 VRVVEIPG----MSVELCGGTHVDNIGRIGLFKIISEASVASGVRRIEAVTGKAAE 711
>sp|Q6GG85|SYA_STAAR Alanine--tRNA ligase OS=Staphylococcus aureus (strain MRSA252)
GN=alaS PE=3 SV=1
Length = 876
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 166/639 (25%), Positives = 289/639 (45%), Gaps = 96/639 (15%)
Query: 6 IEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIE 65
+E+WN+VF + PL IDTG+G ER+ ++ QN + Y+TDLF+P++ IE
Sbjct: 199 LEVWNLVFSEFNHNKDHSYTPLPNKNIDTGMGLERMASVSQNVRTNYETDLFMPIMNEIE 258
Query: 66 KVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLI 125
KVS G+ + +N D+ ++++++D+ R I A++D P + R V LL
Sbjct: 259 KVS-----GKQYLVNNEQDV--AFKVIADHIRTIAFAISDGALP--ANEGRGYVLRRLLR 309
Query: 126 SEDVFKVKQGKLVKELSYNIAEILGDV----YPEIQDSINKIQLILGEESRIFDNLRKAA 181
F G + + Y + +I+ D+ YP +++ + I+ ++
Sbjct: 310 RAVRFSQTLG-INEPFMYKLVDIVADIMEPYYPNVKEKADFIKRVI-------------- 354
Query: 182 VKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLS 241
+ E E+F+ E GL + + + K A + EI+G AF LYDTYG
Sbjct: 355 ----------KSEEERFHETLEDGLAILNELIKKAKA---TTNEINGKDAFKLYDTYGFP 401
Query: 242 KNIIQELAAAKKLTLCHEAFEQKLNELKERSK-AKAASNVPDIDLMDLKHFPVTDDKYKY 300
+ +E+A L + FE ++ + ++R++ A+ S + LK+
Sbjct: 402 IELTEEIAVQAGLKVDMTTFESEMQQQRDRARQARQNSQSMQVQSEVLKNITSASTFVG- 460
Query: 301 DYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLI 360
YDT + + T L N G++V Q+E V +
Sbjct: 461 ---YDTATAQTTLTHLIYN------GEEV-------------------SQVEAGETVYFM 492
Query: 361 FDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELA-SLEGKIVHFGNVVSSFKVTPG 419
+T YA +GGQ+ D G+ Y +N ++ + E+ + G+ +H G VV +V G
Sbjct: 493 LTETPFYAVSGGQVADTGIVY-----NDNFEIAVSEVTKAPNGQNLHKG-VVQFGQVNVG 546
Query: 420 LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETL 478
T EV+ R + H+ +HLL+AAL+ VL Q V +D DFS +G +
Sbjct: 547 ATVSAEVNQNDRRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFG-PM 605
Query: 479 SVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDISDKEN 538
+ D + VE+ +N+ I + V+ + M + + + GE Y D V +++++
Sbjct: 606 TNDEIDQVERLVNEEIWKGIDVNIQEMDIVSAKEMGAMALF-GEKYGDVVRVVNMAP--- 661
Query: 539 VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVE------NGKQL 592
S E C G HV NT I ++ GVR I+ LTG+++ +E N +
Sbjct: 662 -FSIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAAFLYLEDIQEKFNTMKS 720
Query: 593 SAAVKQLAATINQNSEQTDEE-----TLNQQNHEIKTLR 626
VK +++ ++ DEE L Q++ EI +L+
Sbjct: 721 QLKVKSDNQVVDKLTQLQDEEKALLKQLEQRDKEITSLK 759
>sp|A6U9N4|SYA_SINMW Alanine--tRNA ligase OS=Sinorhizobium medicae (strain WSM419)
GN=alaS PE=3 SV=1
Length = 887
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 163/614 (26%), Positives = 270/614 (43%), Gaps = 92/614 (14%)
Query: 1 DRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPL 60
D + IEIWN+VF+ +++++ + V L + IDTG+G ERL +LQ + YD DLF L
Sbjct: 194 DGDRFIEIWNLVFMQYEQITKEERVDLPRPSIDTGMGLERLAAVLQGQHDNYDIDLFRAL 253
Query: 61 LETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRN 117
+ E+ +G K G D S+R+++D+ R +AD + P + LR
Sbjct: 254 IAASEEATGVKAEG---------DRRASHRVIADHLRSSAFLIADGVLPSNEGRGYVLRR 304
Query: 118 VVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILG-EESRIFDN 176
++R A+ ++ Q L+ +L + +G YPE+ + I L EE+R
Sbjct: 305 IMRRAMRHAQ--LLGAQDPLMWKLLPALVGQMGRAYPELVRAEALISETLKLEETRFRKT 362
Query: 177 LRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYD 236
L + N++EE L + +G+ AF LYD
Sbjct: 363 LERG-----------------LNLLEEASADL------------SEGDQFNGETAFKLYD 393
Query: 237 TYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDD 296
TYG ++ Q+ AK + + +AF + +++++A+A + F + D
Sbjct: 394 TYGFPLDLTQDALRAKGIGVDTDAFTAAMQ--RQKAEARANWTGSGDAATETIWFELRDK 451
Query: 297 KYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNA 355
D+ YDT S G++ Q D + A G ++
Sbjct: 452 HGATDFLGYDTESAE-----------GVI---QAIVRDGTVVESASKGETVQ-------- 489
Query: 356 WVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASL-EGKIVHFGNVVSSF 414
L+ ++T Y +GGQ+ D GV T E+GK+ + + EG VH+ VV
Sbjct: 490 ---LVLNQTPFYGESGGQVGDTGV-----VTTESGKLTVTDTQKRGEGLFVHY-CVVEEG 540
Query: 415 KVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSV 473
V G + + VD R H+ +HLL+ ALR VL T QK V + D S
Sbjct: 541 SVKTGEAAALAVDHARRTRLRANHSATHLLHEALREVLGTHVSQKGSLVAPERLRFDVS- 599
Query: 474 YGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDVILIDI 533
+ + ++ + + VE+ N++I V R M + + + + GE Y D+V ++ +
Sbjct: 600 HPKPMTSEELKVVEEMANEIIVQNTPVVTRLMSVDDAIAEGAMALF-GEKYGDEVRVVSM 658
Query: 534 ------SDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAV- 586
S S E C GTHV TG I ++ + GVR ++ LTGE+++A +
Sbjct: 659 GQGLHGSKAGKAYSVELCGGTHVSATGDIGLVRIVSESAVGSGVRRVEALTGEAARAYLG 718
Query: 587 ---ENGKQLSAAVK 597
E K L+AA+K
Sbjct: 719 EQDERVKALAAALK 732
>sp|Q1GHA1|SYA_RUEST Alanine--tRNA ligase OS=Ruegeria sp. (strain TM1040) GN=alaS PE=3
SV=2
Length = 883
Score = 173 bits (439), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 168/651 (25%), Positives = 294/651 (45%), Gaps = 107/651 (16%)
Query: 1 DRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPL 60
D + IEIWN+VF+ ++R + ++V L IDTG+G ER+ +LQ Y+TDLF L
Sbjct: 193 DGDRFIEIWNLVFMQNERFADGSMVDLDMQSIDTGMGLERIAALLQGTHDNYETDLFKYL 252
Query: 61 LETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRN 117
+E V+ ++PYG D + +R+++D+ R + +A+ + P + LR
Sbjct: 253 IEASATVTKSEPYG---------DQNVHHRVIADHLRSCSFLIAEGVLPSNEGRGYVLRR 303
Query: 118 VVRDA-----LLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLIL-GEES 171
++R A LL + D ++ +L + +G YPE+ I+ EE+
Sbjct: 304 IMRRAMRHASLLGATD-------PVMHKLVPALVSQMGAAYPELGQGQALIEETFEQEET 356
Query: 172 RIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMA 231
R L + K L +LE+ +++ G+ A
Sbjct: 357 RFLKTLDRG----LKLLDDASGDLEKGDVL-------------------------PGETA 387
Query: 232 FTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLK-H 290
F LYDT+G ++ Q+ AK + + + F+ + KE+S+ A + D D+K +
Sbjct: 388 FKLYDTFGFPLDLTQDALRAKGIEVDTDGFDAAMKAQKEQSR---AGGIGLGDATDVKVY 444
Query: 291 FPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSI 349
F + D + ++ Y+T + +V +V + GA +DS
Sbjct: 445 FDIVDAEGTTEFLGYETEKA-------EGQIVALV----------------KDGARVDSA 481
Query: 350 QLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGN 409
+ + V +I ++T Y +GGQ+ D G+ T E G I + +EG +H
Sbjct: 482 KAGES--VQIILNQTPFYGESGGQVGDSGM-----LTVEGGAARITDTKKVEGLFLHIAE 534
Query: 410 VVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECA 468
V ++ G + +EVD R H+ +HLL+ ALR L QK +D
Sbjct: 535 VTEG-EIAVGSGAAMEVDHVRRSQIRANHSATHLLHEALRNALGDHVAQKGSLNAADRLR 593
Query: 469 LDFSVYGETLSVDSVAAVEKYINDVIADQVQVDRRHMRASELPSLTHLTVIPGEIYPDDV 528
DFS + + +S + ++ + +ND I V R M + +L + GE Y ++V
Sbjct: 594 FDFS-HNKAVSAEDLSKISAEVNDFIRQNSAVSTRIMTPDDARALGAQALF-GEKYGEEV 651
Query: 529 ILIDI--------SDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGE 580
++ + +D E S E C GTHV TG I + ++G + + GVR I+ LTG
Sbjct: 652 RVVSMGRAPTGKGADGE-TYSIELCGGTHVKQTGDIGTFVILGDSASSAGVRRIEALTGA 710
Query: 581 SSKAAVEN--GK--QLSAAVKQLAATINQNSEQTDEETLNQQNHEIKTLRE 627
++ A +E G+ +++A++K A + + + +E QN EI TL++
Sbjct: 711 AAFAHLEREAGRMAEVAASLKAQPADVMERLKALMDERKALQN-EIATLKQ 760
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 288,365,954
Number of Sequences: 539616
Number of extensions: 12239589
Number of successful extensions: 41769
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 37638
Number of HSP's gapped (non-prelim): 1818
length of query: 797
length of database: 191,569,459
effective HSP length: 126
effective length of query: 671
effective length of database: 123,577,843
effective search space: 82920732653
effective search space used: 82920732653
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)