BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6339
(925 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307176881|gb|EFN66222.1| Alanyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
Length = 1005
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 322/798 (40%), Positives = 469/798 (58%), Gaps = 27/798 (3%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IR FLDYF N H++++SSP+ P D S+AF+N+GM QFK +FL P +V NSQ
Sbjct: 22 IRKEFLDYFSNDLKHSIIRSSPVSPIADQSLAFINAGMNQFKGIFLDYHEPPAAKVVNSQ 81
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KC+RVGGKHNDLS G DSYHHTFFEMLGNWSF DY+K DAC A LT +P +
Sbjct: 82 KCIRVGGKHNDLSVVGNDSYHHTFFEMLGNWSFGDYFKEDACTYAWNLLTNI-YGIPEEC 140
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHY 196
LY TYFGG+++ G+ D E ++IWL LG+P + GM+ NFWEMG +GPCG +EIH
Sbjct: 141 LYVTYFGGNEKLGMAPDLECKNIWLRLGLPECKVLPFGMRDNFWEMGLSGPCGPCTEIHV 200
Query: 197 DMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTIL 256
D ++ ARVN DL+E+WNIVFI ++R++ +IVPLSK+++DTG+GFERLVT L
Sbjct: 201 DFMRRNTNQAARVNKGYADLMELWNIVFIQYERLANGSIVPLSKHHVDTGMGFERLVTFL 260
Query: 257 QNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALAD 316
Q K S YDTDLF PL + I+K S A Y TF + LD YR+L+D++RM+TVALAD
Sbjct: 261 QGKKSNYDTDLFQPLFDAIQKHSNAPNYKGTFDNDDTGKLDYGYRILADHTRMVTVALAD 320
Query: 317 NMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQL 376
NM P+ KLR ++R+A+ + E +F K G +V EL+Y +A+ L YPE+ +++ ++Q
Sbjct: 321 NMLPEEQKKLRRILRNAINVGEKIFH-KSG-IVTELAYTVADNLDAAYPELHNNLKQVQR 378
Query: 377 ILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITE 436
I+ E +F LR + K+W +++ +PEL PGLV G K L L
Sbjct: 379 IIDFEEDLFKRLRNTSGKKWSKMIEIRPELASITDWMAPGLVDGYKELQSMLKELRKTNI 438
Query: 437 ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNV----P 492
+SG +AF LYDTYGL+ I ELA + L FE++L+ + +SK N
Sbjct: 439 LSGTVAFKLYDTYGLNSETIAELAEIESLHFDEIDFEKQLDNHRYQSKIGLDKNSILTKE 498
Query: 493 DIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHAR 552
+++++ H P T+D +KY+Y Y+ N+ FP L++ L+GI+I ++ I R
Sbjct: 499 SLEILEKDHVPKTNDSFKYNYTYNGNNYE--FPALNSKLIGIIINGEL------VINKTR 550
Query: 553 SGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLE 612
++ I +G+I DKT Y++ GGQ+ DIG N + +N I + +
Sbjct: 551 KTINVKEI-YNSTDEIGIILDKTVCYSSEGGQVSDIG-----NISIKNLFFNIDNVIKIN 604
Query: 613 GKIVHFGNV------VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCT 666
G ++H G S + G V ++ +R+G M+ HT +HLLNAAL++V+
Sbjct: 605 GYVIHSGYFAKIDLPTSELYLQIGDDCLVNIEPNIRIGAMKHHTATHLLNAALKQVMQVV 664
Query: 667 YQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTH 726
YQ S V +D F+ +GE L++D + +E IN++I + + + EL
Sbjct: 665 YQSSSTVNADNLKFQFNSFGEQLTLDQMRIIEHCINNIIQTRAAITVETLNLLELLKQDD 724
Query: 727 LTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIK 786
+T+IPGEIYP I + + N+ S+E CCGTHV NT ++ + Y S R++K
Sbjct: 725 ITLIPGEIYPYTGIKVIEINANNLKSKETCCGTHVHNTSVLQHFCFLTYTSKGTTKRTVK 784
Query: 787 CLTGDSSKAAVENGKHLS 804
+ G + + G+ +S
Sbjct: 785 AIVGQEALRMKQAGERIS 802
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTF 878
P D S+AF+N+GM QFK +FL P +V NSQKCIRVGGKHNDLS G DSYHHTF
Sbjct: 46 PIADQSLAFINAGMNQFKGIFLDYHEPPAAKVVNSQKCIRVGGKHNDLSVVGNDSYHHTF 105
Query: 879 FEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FEMLGNWSF DY+K DAC A LT +P + LY T+
Sbjct: 106 FEMLGNWSFGDYFKEDACTYAWNLLTN-IYGIPEECLYVTY 145
>gi|322795678|gb|EFZ18357.1| hypothetical protein SINV_04921 [Solenopsis invicta]
Length = 1018
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 317/803 (39%), Positives = 470/803 (58%), Gaps = 26/803 (3%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS FLDYF H+ ++SSP+ P D S+AF+N+GM QFK +FL P + NSQ
Sbjct: 21 IRSEFLDYFMKDLNHSFIRSSPVSPITDQSLAFINAGMNQFKGIFLDYYKPPVTKAVNSQ 80
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KC+RVGGKHNDLS G D YHHTFFEMLGNWSF DY+K DAC A LT +P +
Sbjct: 81 KCIRVGGKHNDLSAVGNDGYHHTFFEMLGNWSFGDYFKEDACSYAWNLLTNV-YDIPKEW 139
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHY 196
LY TYFGG ++ G+ D E +DIWL+LG+P + I GM+ NFWEMG +GPCG +EI+
Sbjct: 140 LYVTYFGGDEKLGMSPDLECKDIWLKLGLPENKILPFGMEDNFWEMGISGPCGPCTEIYI 199
Query: 197 DMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTIL 256
D + ++ ++N +++E+WNIVFI ++R++ IVPL +++DTG+GFERLV++L
Sbjct: 200 DFTKQSANQAEQINKGYPNIMELWNIVFIQYERLANGYIVPLPNHHVDTGMGFERLVSLL 259
Query: 257 QNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALAD 316
Q K S YDTDLF PL I+K S A Y TF + +D YR+L+D++RMITVALAD
Sbjct: 260 QGKKSNYDTDLFQPLFNAIQKRSNAPEYKGTFGDDDTGKIDYGYRILADHTRMITVALAD 319
Query: 317 NMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQL 376
+M P+ KLR V+R+A+ + E VF K+ +V EL N+A+ LG YPE+ ++ ++Q
Sbjct: 320 HMLPEQHPKLRKVLRNAIDVGEKVF--KKPSIVSELVCNVADNLGVAYPELHTNLKQVQR 377
Query: 377 ILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITE 436
I+ E + LR + K W +V+T+PEL PGLV G K L L
Sbjct: 378 IIDFEDDLLKRLRNTSGKMWSKIVETRPELTAITDSMAPGLVDGYKDLQSMLKELRKTNV 437
Query: 437 ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK---AKAASNVPD 493
+SG +AF LYDTYGL+ I ELA + L FE++LN K +S+ K ++ +
Sbjct: 438 LSGTVAFKLYDTYGLNSETIAELAQIESLHFDEIGFEEQLNNRKYQSRFGLGKHSTVITK 497
Query: 494 IDLMDLK--HFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHA---- 547
L LK H P TDD +KY+Y YD N+ Y FP L++ L+GI++ ++ +
Sbjct: 498 ESLGILKKNHVPKTDDSFKYNYTYDGNT--YKFPALNSKLIGILLNGELVANKNDSNITK 555
Query: 548 IRHARSGASIDSIQLEHNA-WVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIG 606
I +A +I+ +++ + +G+I D+T Y+ GGQ+ D G N +N +
Sbjct: 556 INNADHKITINIGKIQSDTDEIGIILDRTVCYSLEGGQVSDKG-----NICIKNLLFNVD 610
Query: 607 ELASLEGKIVHFGNV------VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
+ + G ++H G+ +S + G V ++ +R+G M+ HT +HLLNAAL+
Sbjct: 611 NVRKVSGYVIHSGHFTKTDLSISDLHLQIGDDCLVNIEPNIRIGAMKHHTATHLLNAALK 670
Query: 661 RVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
+++ YQ+ C V D F+ +GE L+ + A+E IN++I + V + + E
Sbjct: 671 QIMQVIYQRGCTVDMDSLKFQFNSFGEQLTSQQMKAIEVCINNIIQSHVATTVHTVNSLE 730
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
L +T++PGEIYP I I + ++ ++E CCGTHV NTG ++ + Y S
Sbjct: 731 LLKQNDVTLVPGEIYPYTGIKIVEINTNDLKAKETCCGTHVHNTGVLQHFCFLTYTSKGA 790
Query: 781 GVRSIKCLTGDSSKAAVENGKHL 803
R+IK + G + + + G+ +
Sbjct: 791 TKRTIKAVVGPEALRSKQAGERI 813
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTF 878
P D S+AF+N+GM QFK +FL P + NSQKCIRVGGKHNDLS G D YHHTF
Sbjct: 45 PITDQSLAFINAGMNQFKGIFLDYYKPPVTKAVNSQKCIRVGGKHNDLSAVGNDGYHHTF 104
Query: 879 FEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FEMLGNWSF DY+K DAC A LT +P + LY T+
Sbjct: 105 FEMLGNWSFGDYFKEDACSYAWNLLTN-VYDIPKEWLYVTY 144
>gi|307212580|gb|EFN88295.1| Alanyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
Length = 1019
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 316/805 (39%), Positives = 470/805 (58%), Gaps = 30/805 (3%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IR FLDYF H++++SSP+ P D S+AF N+GM QFK +FL P +V NSQ
Sbjct: 28 IRKEFLDYFAKDLKHSIIRSSPVSPITDQSLAFTNAGMNQFKGIFLNYYEPPATKVVNSQ 87
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KC+RVGGKHNDLS G D+YHHTFFEMLGNWSF DY+K DAC A FLT +P
Sbjct: 88 KCIRVGGKHNDLSVVGNDNYHHTFFEMLGNWSFGDYFKEDACVYAWNFLTNI-CDIPQKY 146
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHY 196
LY TYFGG+ + G+ D E ++IWL+LG+P I ++ NFWEMG +GPCG +EIH
Sbjct: 147 LYVTYFGGNKELGIAPDLECKNIWLKLGLPEGKILPFDIQDNFWEMGPSGPCGPCTEIHV 206
Query: 197 DMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTIL 256
D P++ ARVN DL+E+WNIVFI ++R+ IVPL K+++DTG+G ERLVT+L
Sbjct: 207 DYMKRPTNQAARVNKGYADLMELWNIVFIQYERLENGCIVPLPKHHVDTGMGLERLVTLL 266
Query: 257 QNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALAD 316
Q KTS YDTD+F P+ I+K + A Y TF + +D YR+L+D++RMITVALAD
Sbjct: 267 QGKTSNYDTDIFQPIFCAIQKYTKAPEYKGTFNNDDTGKIDYGYRILADHARMITVALAD 326
Query: 317 NMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQL 376
NM P+ KLR V+R+A+ E +F ++ ++ +L ++A+ LG+VY E+ +++ +++
Sbjct: 327 NMLPEQHPKLRKVLRNAIDTGEKIF--RKTDILAQLVCDVADNLGEVYTELHNNLKQVKR 384
Query: 377 ILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITE 436
I+ E +F+ LR A+ K W ++K +PEL PGLV G K L L
Sbjct: 385 IIKFEEDLFNRLRNASNKRWNEMIKIRPELASITDWTAPGLVDGYKNLQTMLKELCKTNL 444
Query: 437 ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASN-----V 491
+ G +AF LYDTYGL+ I ELA + L F+++L+ + +S+ N
Sbjct: 445 LPGSVAFKLYDTYGLNLETITELAQIESLHFDEAGFQKQLDISRYQSRIGFNKNNIVFTE 504
Query: 492 PDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHA 551
+ +++ H P TDD +KY+Y YD N Y FP L++ L+GI+I Q+ I +
Sbjct: 505 KSLRILEKNHMPKTDDSFKYNYTYDGND--YKFPMLNSKLIGIIINGQLVTDTNSHIANL 562
Query: 552 RSGASIDSIQ----LEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGE 607
+ SI L +G+I DKT Y+ GGQ+ D G ++ N I
Sbjct: 563 NDVNNKISINVSDILNSKDEIGIILDKTICYSLEGGQVSDQGNIHIKNLF-----FNIHN 617
Query: 608 LASLEGKIVHFGNVV------SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+ + G ++HFG S + G V +D+++R+ M+ HT +HLLNAA++
Sbjct: 618 VRKINGYVIHFGKFEKTDIPPSEMYLEIGDDCLVNIDSQIRVDTMKHHTAAHLLNAAMKE 677
Query: 662 VLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
V+ YQ++C V + F+ +GE L+++ + +E IN+VI + V V + + + +L
Sbjct: 678 VMHTVYQRACTVDMNNLKFQFNPFGEKLTLEQMRMIENRINNVIQSHVAVTVQTLNSLQL 737
Query: 722 PFLTHLTVIPGEIYP-DDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+T++PGEIYP D+ +++I + E++ ++E CCGTHV NTG ++ + Y S
Sbjct: 738 LGQDDITLVPGEIYPYTDIRIVEI-NAEDLKAKEACCGTHVHNTGVLQHFYFVTYTSKGA 796
Query: 781 GVRSIKCLTGDSS---KAAVENGKH 802
+K + G + K A E +H
Sbjct: 797 AKCDVKAVVGPWALRIKQASEKIQH 821
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTF 878
P D S+AF N+GM QFK +FL P +V NSQKCIRVGGKHNDLS G D+YHHTF
Sbjct: 52 PITDQSLAFTNAGMNQFKGIFLNYYEPPATKVVNSQKCIRVGGKHNDLSVVGNDNYHHTF 111
Query: 879 FEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FEMLGNWSF DY+K DAC A FLT +P LY T+
Sbjct: 112 FEMLGNWSFGDYFKEDACVYAWNFLTN-ICDIPQKYLYVTY 151
>gi|340728025|ref|XP_003402333.1| PREDICTED: LOW QUALITY PROTEIN: alanyl-tRNA synthetase,
mitochondrial-like [Bombus terrestris]
Length = 882
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/811 (39%), Positives = 484/811 (59%), Gaps = 27/811 (3%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPA 67
S ++ +K IR+ FLDYF GHT ++SSP++ Y D +IAFVN+GM QFK +FL
Sbjct: 16 SAIQKSAKLIRNEFLDYFKKDLGHTFIRSSPVISYNDHTIAFVNAGMNQFKGIFLDYYNP 75
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
P +V NSQKC+R+ GKHNDL+ G DSYHHTFFEMLG+WSF Y+K +ACR A LTK
Sbjct: 76 PAMKVTNSQKCIRISGKHNDLNIVGNDSYHHTFFEMLGSWSFGSYFKEEACRYAWNLLTK 135
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
+ D LY TYFGG ++ L D E +DIWL +G+ +D + G++ NFWEMG +GP
Sbjct: 136 H-YGINEDCLYVTYFGGDERMELEPDLECKDIWLSIGIRQDKVLPFGLQENFWEMGISGP 194
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG +EIH D + + ++N DL E+WNIVFI ++R+S TIVPL K+Y+DTG+
Sbjct: 195 CGPCTEIHIDHTKQLKNRCMQINKGYTDLTELWNIVFIQYERLSNGTIVPLPKHYVDTGM 254
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV +LQ K S YDTD+F P +TI+K + A Y F +++ +LD+ YR+L+D+S
Sbjct: 255 GFERLVAVLQGKQSNYDTDIFQPFFKTIQKYTKAPEYKGKF-YNDKNELDSGYRILADHS 313
Query: 308 RMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
RMITVALAD + P+ + KLR ++R ++ +SE VFK KQG ++ ELSY + E LGDVYPE+
Sbjct: 314 RMITVALADGVIPEQSNKLRKIIRKSIDVSEKVFK-KQG-ILSELSYIVVENLGDVYPEL 371
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
Q ++ K+Q I+ E ++ L+ K+W LVKT P+L PGL G KYL
Sbjct: 372 QKNLKKVQKIIEFEEELYKKLKHTCHKQWTKLVKTYPQLSSITEQLTPGLGDGYKYLQHV 431
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK--- 484
L + +SG +AF LYDTYGLS I ELA + L AF+++L LK RS+
Sbjct: 432 LNNLEASNVLSGSVAFKLYDTYGLSVETITELAKIESLYFDKVAFQKELECLKNRSRIGL 491
Query: 485 -AKAASNV-PDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
+ +N+ +++++ P TDD +KY Y + N+ Y FP +++ ++ ++I D
Sbjct: 492 EKSSITNIKKSLEILEENCIPKTDDSFKYKYVLNGNN--YEFPKIESKIMALIINDNTII 549
Query: 543 IDKHAIRHARSGASIDSIQLEHNA---WVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
+ + ++++ + +NA +GLI DKT Y+T GGQI D +
Sbjct: 550 NKANENTNKNIHSTVNDTIINYNADKDKIGLILDKTLCYSTQGGQISDKAT-----ICSK 604
Query: 600 NGKVEIGELASLEGKIVHFGNVVSS--FKVTPGLTSR----VEVDARMRLGCMRAHTTSH 653
N + ++ + G ++H+G +V + K L + V ++ R+G M+ HT +H
Sbjct: 605 NWNFNVYDVKKINGYVIHYGKLVQTDLRKWIEELKIKDDCLVSIEPEFRIGVMQHHTATH 664
Query: 654 LLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LL+A++++++ Y ++ + F+ +GE LS + +E+ IN+VI V V
Sbjct: 665 LLHASIQQIMQAVYLRNSTIIPHSLKCQFNSFGEDLSFKQLKEIEELINNVIIANVPVTT 724
Query: 714 RHMRASELPFLTHLTVIPGEIY-PDDVILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
+ + EL + +T+IPGEIY D+ LI+I + ++ S+E CCGTHV TG ++
Sbjct: 725 KILNVLELLAESSVTLIPGEIYFYKDIRLIEI-NFHDLRSKEACCGTHVLKTGELKYFCF 783
Query: 773 IGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ Y S +++ G +++A G+++
Sbjct: 784 LNYFSKGASNFTLEATVGSLARSAKLAGENI 814
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
I Y D +IAFVN+GM QFK +FL P +V NSQKCIR+ GKHNDL+ G DSYHHT
Sbjct: 48 ISYNDHTIAFVNAGMNQFKGIFLDYYNPPAMKVTNSQKCIRISGKHNDLNIVGNDSYHHT 107
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLG+WSF Y+K +ACR A LTK + D LY T+
Sbjct: 108 FFEMLGSWSFGSYFKEEACRYAWNLLTK-HYGINEDCLYVTY 148
>gi|383852979|ref|XP_003702002.1| PREDICTED: alanine--tRNA ligase, mitochondrial-like [Megachile
rotundata]
Length = 1007
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 315/827 (38%), Positives = 479/827 (57%), Gaps = 32/827 (3%)
Query: 7 SSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP 66
+S ++ +K IR+ FLDYF N GHT ++SSP+VP D ++ FVN+GM QFK +FL
Sbjct: 14 TSTIKKSAKLIRNEFLDYFKNDLGHTFIRSSPVVPINDHTVPFVNAGMNQFKGIFLDYYD 73
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
P + NSQKC+R+ GKHNDL+ G D+YHHTFFEMLGNWSF +Y+K++AC+ A + LT
Sbjct: 74 PPVMKAVNSQKCIRISGKHNDLNVVGSDTYHHTFFEMLGNWSFGEYFKKEACQYAWDLLT 133
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K ++ D LY TYFGG ++ L D E RDIWL +GVP+D I G++ NFWEMG +G
Sbjct: 134 KG-YNINKDFLYVTYFGGDEKLELEPDLECRDIWLNIGVPKDRILPFGIQENFWEMGISG 192
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG +EIH D + + +++ + L E+WNIVFI + R++ TIVPL K+++DTG
Sbjct: 193 PCGPCTEIHIDYTKQLLNQSNQISKNSPALTELWNIVFIQYSRLTDGTIVPLPKHHVDTG 252
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV +LQ K S YDTDLF PL +TI++ + A Y F +++++ LD YR+L+D+
Sbjct: 253 MGFERLVALLQGKKSNYDTDLFQPLFKTIQEYTKAPAYEGKF-SNDKSGLDNGYRVLADH 311
Query: 307 SRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
SRMI+VALAD + P+ + KLR ++R + I E FK + ++ EL+Y +AE LGDVYPE
Sbjct: 312 SRMISVALADGIIPEQSNKLRKIIRKVVDIGEKTFKKRD--ILPELAYAVAENLGDVYPE 369
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+Q+++ +Q I+ E ++ L+ + KEWK +V +PEL + PGLV G KY
Sbjct: 370 LQNNLKTVQKIMRFEEELYIRLQNTSGKEWKKIVAKRPELASISEWATPGLVPGYKYFQS 429
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
L + ++G++AF LYDTYGLS I ELA + L AFE + LK RS+
Sbjct: 430 ILDELKATNTLTGNVAFILYDTYGLSAETINELAEVESLRFDSAAFENEFENLKNRSRIG 489
Query: 487 AASNVPD-----IDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
D ++ H P TDD +KY Y D N+ Y FP +D+ +V ++ +++
Sbjct: 490 LRKTNVDLLRRHVETFKNNHVPKTDDSFKYKYIDDGNN--YQFPTVDSKIVALIGNGKIY 547
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
S +S +L + +G++ DKT Y+ GGQ+ D G + +
Sbjct: 548 --------KTISTEENESTELNEDE-IGIVLDKTVCYSMEGGQVSDKGFICIKDL----- 593
Query: 602 KVEIGELASLEGKIVHFGNVVSSF------KVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
K I L ++G +HFG + K++ G V + R+G M+ HT +HLL
Sbjct: 594 KFSINHLRKIDGYAIHFGTFGQNSSENLCDKLSIGDACTVSIVPEFRIGVMQHHTGAHLL 653
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
NAA+++++ Y ++ V S+ ++ +GE LS + + +E +N+ I V V +
Sbjct: 654 NAAVKQIIQGVYPRNSLVNSNFLKFRYNSFGEKLSHEQLKEIENRVNNAIEANVPVTTKL 713
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ + EL +++IPGEIYP I + D ++ S+E CCGTHV TG +E + Y
Sbjct: 714 LNSLELLTEDSVSLIPGEIYPYTGIRVVEIDVPDLRSKEACCGTHVSKTGMLEYFCFLKY 773
Query: 776 KSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS-FSQILNVGNIPYG 821
+ +++ G + +A G+++ + S L G + Y
Sbjct: 774 FTRGTCNFNLEAAVGQPAISAKLIGENIQSEVSDLEHELKTGQVSYA 820
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ FVN+GM QFK +FL P + NSQKCIR+ GKHNDL+ G D+YHHT
Sbjct: 47 VPINDHTVPFVNAGMNQFKGIFLDYYDPPVMKAVNSQKCIRISGKHNDLNVVGSDTYHHT 106
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF +Y+K++AC+ A + LTK ++ D LY T+
Sbjct: 107 FFEMLGNWSFGEYFKKEACQYAWDLLTK-GYNINKDFLYVTY 147
>gi|91087359|ref|XP_975627.1| PREDICTED: similar to mitochondrial alanyl-tRNA synthetase
CG4633-PA [Tribolium castaneum]
Length = 1044
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 331/806 (41%), Positives = 455/806 (56%), Gaps = 39/806 (4%)
Query: 6 ISSYVR--LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG 63
IS YV K+IR FLDYF N H +KSSP+VP+ D ++AFVN+GM QFK VFLG
Sbjct: 66 ISKYVDKDRTGKAIRQKFLDYFINKNNHNFIKSSPVVPFCDPTVAFVNAGMNQFKGVFLG 125
Query: 64 LTPAPYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALE 123
Y VANSQKC+RVGGKHNDL+ G D YHHTFFEMLGNWSF DY+K++AC +A +
Sbjct: 126 THQPQYKNVANSQKCIRVGGKHNDLNVVGGDGYHHTFFEMLGNWSFGDYFKQEACELAWK 185
Query: 124 FLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMG 183
LT+ P RLY TYF G G+ D ET++IW +GV D I K NFWEMG
Sbjct: 186 LLTEEYKIHP-SRLYVTYFKGDPVLGIDEDLETKEIWKTIGVSEDRILPFTSKDNFWEMG 244
Query: 184 STGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYI 243
TGPCG +EIH D + A VN +DL E+WN+VFI + R S +++ L + ++
Sbjct: 245 PTGPCGPCTEIHIDHTTSNNRA-KLVNKGLHDLTELWNLVFIQYNRKSNESVDLLPEKHV 303
Query: 244 DTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRML 303
DTG+GFERL +LQ K S YDTD F LL+ I+ S Y TF + LD SYR+L
Sbjct: 304 DTGMGFERLTAVLQGKISNYDTDNFTYLLKAIQNCSKIPEYRGTFGEKDWNSLDASYRVL 363
Query: 304 SDYSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+D++RM+TV LAD M P+ KLR V+R A L+ E+VF G L+KELS + E LG V
Sbjct: 364 ADHARMVTVCLADAMIPEQNQKLRRVMRRAFLLCENVFNKDSG-LLKELSNYVIEHLGCV 422
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
YPE++ ++ +I I+ E ++ ++RK A +EW L K QP+L +I E P LV G K
Sbjct: 423 YPEMERNVKQIHQIIDYEEEVYKSVRKQATEEWVKLAKHQPKLLSLDINENPSLVAGYKE 482
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
++ + +P I +AF LYDT+GL ++ I LA L ++L K RS
Sbjct: 483 IS---STNPKF--IDAQLAFKLYDTFGLDEDSISSLAQILNLPFNASDLHKQLELAKIRS 537
Query: 484 KAKAASNVPDI-DLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
K + + P++ + + P TD Y+Y ++Y F L+ ++ IV
Sbjct: 538 KEQGLVSGPNVYEQLTRAKVPKTDRSTLYNYA--KKGEKYVFDDLEVVILKIV------- 588
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
D +R Q+E + GL+ DK++ Y AGGQI D G +
Sbjct: 589 KDSKLVR-----------QIESENFYGLVLDKSSFYTEAGGQISDRGAINFGDCV----- 632
Query: 603 VEIGELASLEGKIVHFGNVVS--SFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
E+ E G I+H G + S S +V G+T +++D RL MR HT HLLN+ L+
Sbjct: 633 FEVTEAQDCNGYILHKGFLRSGESGRVKVGMTGSLKIDPDFRLKNMRNHTAVHLLNSVLK 692
Query: 661 RVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
+V T QKS +V + LD ++ E LS+D + VE I VI ++ V+ + +
Sbjct: 693 KVKGATCQKSSKVTQNYFNLDVGIFAEKLSLDELELVESTITKVIQGRLPVNISELDSQR 752
Query: 721 LPFLTHLTVIPGEIYPDDVI-LIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
L L + +IPGE+YP+ I ++++ E +SREPCCGTHV NT IE ++ KS
Sbjct: 753 LANLDEIILIPGEVYPETGIRVVEVKGGEGFLSREPCCGTHVLNTSDIEDFCIVSMKSLG 812
Query: 780 HGVRSIKCLTGDSSKAAVENGKHLST 805
SI +TGD +K A NG HL T
Sbjct: 813 RSTTSIHGVTGDRAKVAKSNGTHLLT 838
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++AFVN+GM QFK VFLG Y VANSQKCIRVGGKHNDL+ G D YHHT
Sbjct: 102 VPFCDPTVAFVNAGMNQFKGVFLGTHQPQYKNVANSQKCIRVGGKHNDLNVVGGDGYHHT 161
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+K++AC +A + LT+ P RLY T+
Sbjct: 162 FFEMLGNWSFGDYFKQEACELAWKLLTEEYKIHP-SRLYVTY 202
>gi|380017803|ref|XP_003692834.1| PREDICTED: alanine--tRNA ligase, mitochondrial-like [Apis florea]
Length = 861
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 318/831 (38%), Positives = 476/831 (57%), Gaps = 54/831 (6%)
Query: 5 NISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGL 64
N S ++ + IR+ FLDYF HT ++SSP++ + D +IAFVN+GM QFK +FL
Sbjct: 11 NSSFTIQRSANLIRNEFLDYFKKDLEHTFIRSSPVISFNDHTIAFVNAGMNQFKGIFLDY 70
Query: 65 TPAPYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEF 124
+P +V NSQKC+R+ GKHNDL+ G DSYHHTFFEMLGNWSF Y+K +ACR A
Sbjct: 71 YNSPVTKVTNSQKCIRISGKHNDLNIVGNDSYHHTFFEMLGNWSFGSYFKEEACRYAWNL 130
Query: 125 LTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGS 184
LTK + + LY TYF G ++ L D E ++IWL +GV +D I G++ NFWEMG
Sbjct: 131 LTKH-YGIKEEFLYVTYFNGDEKLELKPDLECKEIWLSIGVKKDKILPFGLQENFWEMGI 189
Query: 185 TGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
+GPCG +EIH D + + ++N DL E+WNIVFI ++R+ + I+PLSK+Y+D
Sbjct: 190 SGPCGPCTEIHVDHTKQLKNRCMQINKGYRDLTELWNIVFIQYERLPSGAIIPLSKHYVD 249
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
TG+GFERLV +LQ K S YDTD+F P + I+K + A Y TF N LD+ YR+L+
Sbjct: 250 TGMGFERLVAVLQGKQSNYDTDIFQPFFKAIQKYTKAPEYKGTFYNDN--SLDSGYRILA 307
Query: 305 DYSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
D+SRMITV+LAD + P+ + KL+ ++R ++ + E VF K+ +++ ELSY + E LG++Y
Sbjct: 308 DHSRMITVSLADGVIPEQSNKLKKIIRKSIDVGEKVF--KKERILSELSYIVVETLGNIY 365
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+Q++I KIQ I+ E ++ L+ + K+W L+KT P+L+ PGL G KYL
Sbjct: 366 PELQNNIKKIQKIIEHEEELYRRLKDTSDKQWIKLIKTYPQLKSITEWLSPGLGDGYKYL 425
Query: 425 TKQLARDPSITEI-SGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
K L D IT++ G ++F LYDTYGL+ I+ELA + L AF ++L LK RS
Sbjct: 426 QKIL-NDLKITKVLPGSVSFKLYDTYGLNIETIKELAEIECLYFDEVAFYKELENLKNRS 484
Query: 484 K-AKAASNVPDI----DLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
+ SNV DI ++++ H P TDD +KY Y ++ NS Y FP +++ ++ ++I +
Sbjct: 485 RIGLEKSNVTDIKKSLEILEKNHVPKTDDSFKYKYVFNGNS--YEFPKIESKILALIINE 542
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
+ +G+I DKT Y+ GQI D G Y+ N
Sbjct: 543 S------------------------NKDEIGIILDKTVCYSVEDGQISDKGFIYIQNLI- 577
Query: 599 ENGKVEIGELASLEGKIVHFGNVVSSF-------KVTPGLTSRVEVDARMRLGCMRAHTT 651
I + + G I+H+G S F K+ G V ++ + R+ M+ HT
Sbjct: 578 ----FNINNVKKMNGYIIHYGK-FSHFDLRKDLEKLKIGDNCLVSIEPKFRIEIMQHHTA 632
Query: 652 SHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
+HLL+A +++++ Y ++ V F+ +GE LS + +E++IN +I V V
Sbjct: 633 THLLHAVIQKIMQAVYLRNSIVLPYGLKCQFNSFGEKLSFKQLKEIEEFINTIIIANVPV 692
Query: 712 DRRHMRASELPFLTHLTVIPGEIYP-DDVILIDISDKENVISREPCCGTHVFNTGHIESC 770
+ + A EL + +IPG+IYP D+ +I+I + ++ S+E CCGTH+ T +E
Sbjct: 693 TTKVLNAMELLAENSVRLIPGKIYPYRDIRVIEI-NFSDLKSKETCCGTHILKTAELEYF 751
Query: 771 TVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS-TAASFSQILNVGNIPY 820
+ Y S +K + G +K A GK++ L G I Y
Sbjct: 752 CFLNYSSKGASNFILKAIVGSLAKTAKMAGKNMQYKVLDLENKLKNGKITY 802
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 65/88 (73%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
I + D +IAFVN+GM QFK +FL +P +V NSQKCIR+ GKHNDL+ G DSYHHT
Sbjct: 46 ISFNDHTIAFVNAGMNQFKGIFLDYYNSPVTKVTNSQKCIRISGKHNDLNIVGNDSYHHT 105
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTK 905
FFEMLGNWSF Y+K +ACR A LTK
Sbjct: 106 FFEMLGNWSFGSYFKEEACRYAWNLLTK 133
>gi|350402768|ref|XP_003486595.1| PREDICTED: alanyl-tRNA synthetase, mitochondrial-like [Bombus
impatiens]
Length = 885
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 318/813 (39%), Positives = 483/813 (59%), Gaps = 29/813 (3%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPA 67
S ++ +KSIR+ FLDYF GHT ++SSP++ Y D +IAFVN+GM QFK +FL
Sbjct: 8 SAIQKSAKSIRNEFLDYFKEDLGHTFIRSSPVISYNDHTIAFVNAGMNQFKGIFLDYYNP 67
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
P +V NSQKC+R+ GKHNDL+ G DSYHHTFFEMLG+WSF Y+K ACR A LTK
Sbjct: 68 PAMKVTNSQKCIRISGKHNDLNIVGNDSYHHTFFEMLGSWSFGSYFKEQACRYAWNLLTK 127
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
+ + LY TYFGG ++ L D E +D+WL +G+ D + G++ NFWEMG +GP
Sbjct: 128 H-YGINEECLYVTYFGGDERLELEPDLECKDVWLSIGIREDKVLPFGLQENFWEMGISGP 186
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG +EIH D + + ++N DL E+WNIVFI ++R+S TIVPL K+Y+DTG+
Sbjct: 187 CGPCTEIHIDHTKQLKNRCMQINKGYTDLTELWNIVFIQYERLSNGTIVPLPKHYVDTGM 246
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV +LQ K S YDTD+F P +TI+K + A Y F ++ +LD+ YR+L+D+S
Sbjct: 247 GFERLVAVLQGKQSNYDTDIFQPFFKTIQKYTKAPEYKGKF-YNDENELDSGYRILADHS 305
Query: 308 RMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
RMITVALAD + P+ + KLR ++R ++ +SE VFK KQG ++ ELSY + E LGDVYPE+
Sbjct: 306 RMITVALADGVIPEQSNKLRKIIRKSIDVSEKVFK-KQG-ILSELSYIVVENLGDVYPEL 363
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
Q+++ K+Q I+ E ++ L+ K+W +VK P+L PGL G KYL +
Sbjct: 364 QENLKKVQKIIEFEEELYKKLKHDCCKQWTNIVKIYPQLSSITEQLIPGLEDGYKYLRRV 423
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK-AK 486
L +SG +AF LYDTYGL+ II +LA + L AF+++L LK RS+
Sbjct: 424 LNNLEGSNVLSGSVAFKLYDTYGLNVEIITKLANIESLYFDKVAFQKELECLKHRSRIGL 483
Query: 487 AASNVPDI----DLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
S++ DI ++++ P TDD +KY + NS Y FP +++ ++ ++I D
Sbjct: 484 EKSSITDIKKSLEILEENCIPKTDDSFKYKCVLNGNS--YEFPKVESKIMALIINDNTII 541
Query: 543 IDKHAIRHARSGASIDSIQLEHNAW-----VGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
+ + ++++ +NA +GLI DKT Y+T GGQI D + N T
Sbjct: 542 NKANENTNKNIHSTVNETITNYNAESDKDKIGLILDKTLCYSTQGGQISDKAIICSKNWT 601
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSS--FKVTPGLTSR----VEVDARMRLGCMRAHTT 651
+ ++ + G ++H+G V + K L + V ++ R+G M+ HT
Sbjct: 602 -----FNVYDVKKINGYVIHYGKFVQTDLRKWIEELNLKDDCLVSIEPEFRVGVMQHHTA 656
Query: 652 SHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
+HLL+A++++++ Y ++ + + F+ +GE LS + +E+ IN+VI V V
Sbjct: 657 THLLHASIQQIMQAVYLRNSTIIPNSLKCQFNSFGENLSFRQLKEIEELINNVIIANVPV 716
Query: 712 DRRHMRASELPFLTHLTVIPGEI-YPDDVILIDISDKENVISREPCCGTHVFNTGHIESC 770
+ + A EL + +T+IPGEI + D+ LI+I + ++ S+E C GTHVF TG ++
Sbjct: 717 TTKILNALELLAESSVTLIPGEIHFYKDIRLIEI-NFHDLRSKEACYGTHVFKTGELKYF 775
Query: 771 TVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ Y S +++ G +K+A G+++
Sbjct: 776 CFLNYFSKGASNFTLEATVGSLAKSAKLAGENI 808
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 63/88 (71%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
I Y D +IAFVN+GM QFK +FL P +V NSQKCIR+ GKHNDL+ G DSYHHT
Sbjct: 40 ISYNDHTIAFVNAGMNQFKGIFLDYYNPPAMKVTNSQKCIRISGKHNDLNIVGNDSYHHT 99
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTK 905
FFEMLG+WSF Y+K ACR A LTK
Sbjct: 100 FFEMLGSWSFGSYFKEQACRYAWNLLTK 127
>gi|332026963|gb|EGI67059.1| Alanyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
Length = 1085
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 320/815 (39%), Positives = 467/815 (57%), Gaps = 35/815 (4%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IR+ FLDYF H+ ++SSP+ P D S+AF+N+GM QFK +FL P +V NSQ
Sbjct: 22 IRNEFLDYFTKDLKHSFIRSSPVSPITDHSVAFINAGMNQFKGIFLDYYKPPVTKVVNSQ 81
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KC+RVGGKHNDLS G+DSYHHTFFEMLGNWSF DY+K DAC A LT +P +
Sbjct: 82 KCIRVGGKHNDLSIVGKDSYHHTFFEMLGNWSFGDYFKEDACSYAWNLLTNV-YDIPTEY 140
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHY 196
LY TYFGG+++ G+ D E +DIWL LG+P + GM+ NFWEMG +GPCG +EIH
Sbjct: 141 LYVTYFGGNEELGMSPDLECKDIWLRLGLPEHKVLPFGMRDNFWEMGVSGPCGPCTEIHV 200
Query: 197 DMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTIL 256
D ++ RVN DL+E+WNIVFI +R++ IVPL ++IDTG+G ERLVT L
Sbjct: 201 DYMKRSTNQAERVNKGYADLMELWNIVFIQCERLTNGCIVPLPNHHIDTGMGLERLVTFL 260
Query: 257 QNKTSTYDTDLFLPLLETIEKVSGAKPYGRTF------TTSNRTDLDTSYRMLSDYSRMI 310
Q K S YDTDLF PL + I+K S A Y F T LD YR+L+D++RMI
Sbjct: 261 QGKKSNYDTDLFQPLFDAIQKHSNAPEYKGKFDDDTGKTMVTELSLDYGYRILADHARMI 320
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDS 370
T+ALAD+M P+ KLR ++R A+ I E F+ K G +V EL+ N+A+ LG YPE+ +
Sbjct: 321 TIALADDMLPEQHPKLRKILRHAMDIGEKTFR-KSG-IVSELACNVADNLGVTYPELHTN 378
Query: 371 INKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLAR 430
+ ++Q I+ E + LR + K W ++KT+PEL PGLV G K L L
Sbjct: 379 LKQVQKIIDFEEELLKRLRNTSGKMWNKMIKTRPELIAVTDWMAPGLVDGYKDLQSMLKE 438
Query: 431 DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA---KA 487
+SG +AF LYDTYGL+ I ELA + L FE++L+ + +S+ K
Sbjct: 439 LRKTNVLSGIVAFKLYDTYGLNSETIAELAQIECLYFDEIDFEKQLDNRRYQSRIGLDKH 498
Query: 488 ASNVPDIDLMDLK--HFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
++ + L LK H P TDD +KY+Y Y+ N Y FP L + L+GI++ ++
Sbjct: 499 STVITKESLGILKKNHVPKTDDSFKYNYTYNGNI--YEFPVLSSKLIGIIVNGELVASKN 556
Query: 546 HA-----IRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
++ + ++ +ID I L +G+I DKT Y+ GGQ+ D G N +N
Sbjct: 557 YSDIKTNNTNNKTVVNIDEI-LNSTNKIGIILDKTICYSLEGGQVSDKG-----NIRIKN 610
Query: 601 GKVEIGELASLEGKIVHFGNV------VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
I + + G ++H G +S + V +++ +R+G M+ HT +HL
Sbjct: 611 LLFNIDNVRKVNGYVIHSGYFAKTDLSISELHLQIDDDCLVNIESNIRIGAMKHHTAAHL 670
Query: 655 LNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
LNAAL++V+ YQ+ C V D F+ GE L+++ + +E IN+VI ++ +
Sbjct: 671 LNAALKQVMQVIYQRGCTVDMDSLKFQFNSLGEQLTLEQMKTIEDCINNVIQSRAVTTVQ 730
Query: 715 HMRASELPFLTHLTVIPGEIYP-DDVILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
+ + EL + ++PGEIYP D+ +++I + ++ ++E CCGTHV NT ++ +
Sbjct: 731 TVNSLELLKQNDVMLLPGEIYPYTDIKIVEI-NTNDLKAKETCCGTHVHNTDVLQHFCFL 789
Query: 774 GYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
Y S R +K + G + + G+++ S
Sbjct: 790 TYTSKGATKRIVKAVVGPEALRMKQAGENICQRIS 824
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTF 878
P D S+AF+N+GM QFK +FL P +V NSQKCIRVGGKHNDLS G+DSYHHTF
Sbjct: 46 PITDHSVAFINAGMNQFKGIFLDYYKPPVTKVVNSQKCIRVGGKHNDLSIVGKDSYHHTF 105
Query: 879 FEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FEMLGNWSF DY+K DAC A LT +P + LY T+
Sbjct: 106 FEMLGNWSFGDYFKEDACSYAWNLLTN-VYDIPTEYLYVTY 145
>gi|195491933|ref|XP_002093777.1| GE21485 [Drosophila yakuba]
gi|194179878|gb|EDW93489.1| GE21485 [Drosophila yakuba]
Length = 1012
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 311/817 (38%), Positives = 456/817 (55%), Gaps = 40/817 (4%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L ++ IR +FLD+F GH V+SSP+VP+ D ++AFVN+GM QFK+VFLG AP+ R
Sbjct: 12 LTAREIRKTFLDHFTVNHGHKFVRSSPVVPFCDPTVAFVNAGMNQFKSVFLGTAAAPHQR 71
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VANSQKCVRVGGKHNDLS G D YHHTFFEMLGNWSF DY+KR+AC MALE L + P +
Sbjct: 72 VANSQKCVRVGGKHNDLSVVGTDGYHHTFFEMLGNWSFGDYFKREACAMALELL-RGPYN 130
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ RLY TYF G G+P D E +IW LG P I G NFWEMG+TGPCG
Sbjct: 131 IDPGRLYVTYFAGDKVLGIPADLECFEIWRSLGFPASRILPFGCADNFWEMGATGPCGPC 190
Query: 192 SEIHYDMKGEPSSALAR---VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
+EIH D + + S R VNA R+DL E+WN+VFI + R + TI L +++DTG+G
Sbjct: 191 TEIHIDHRPDLGSVEQRAKLVNAGRSDLTELWNLVFIQYNRHADGTISQLPAHHVDTGMG 250
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTT-SNRTDLDTSYRMLSDYS 307
FERL +LQNK+S YDTDLF P+ + I++ + + Y +F N LDTSYR+L+D++
Sbjct: 251 FERLTAVLQNKSSNYDTDLFTPIFDGIQQAAKSPVYSGSFPVDGNGALLDTSYRILADHA 310
Query: 308 RMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
RM+T LAD M PD KLR V+R AL ISE VF Q KL+ +L + E LG+ YPE+
Sbjct: 311 RMVTACLADGMLPDQNQKLRRVLRKALNISEHVF--AQDKLLTQLVPIVVETLGEAYPEM 368
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ ++ E ++ NLR+++ K + ++ P L+ ++ME PG V + Q
Sbjct: 369 AAKQQAVIDLISHEQEVYKNLRESSSKAFAEVLMEFPNLDDIDLMECPGFVPAYREFQVQ 428
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
++ P+ T I GD + L DTYGL++ +LA + + E + ++N K ++K
Sbjct: 429 RSKFPNNT-IPGDFLYKLTDTYGLTEESFLKLAELENMNCDLERYRAEVNLAKIKAKGNQ 487
Query: 488 -------------ASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ + M K TD+ +KY Y +D S Y P L T ++G+
Sbjct: 488 REIAGGSLCDLANEQRIAEAQAMLTKRLAPTDNSHKYAYSFDKASDSYQIPPLKTRVLGM 547
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
++ D +R+ S IQ + ++ +N Y +GGQ D G +
Sbjct: 548 LLNDAEV---------SRTQGS--RIQQPSTDLISIVTAASNFYYESGGQQSDGGKILVR 596
Query: 595 NTTQENGK--VEIGELASLEGKIVHFGNVVS---SFKVTPGLTSRVEVDARMRLGCMRAH 649
N Q +++ + L +VH + S +F++ G ++VDA+ R H
Sbjct: 597 NHQQPEHPHLLDVISVKHLNDCVVHVCKLSSPTDAFQLAIGDEVELQVDAQQRQLNTCHH 656
Query: 650 TTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +HLLNAA+R + TYQ S V SD+C L+ + G+ L V +E IN VI +
Sbjct: 657 TATHLLNAAIRSLFKKVTYQVSSSVTSDQCKLELGLLGKRLQKSDVQLIEDLINRVICSA 716
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVI-LIDISDKE-NVISREPCCGTHVFNTGH 766
V + + A+E+ +T++PGE+YP+ + L+++ E + S+E CCGTH NT
Sbjct: 717 TPVQVQLLSAAEVLQQNDITMVPGEVYPEQGLRLVNVESPELQLSSKELCCGTHATNTSE 776
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ S ++ K N + + G +++ ++ L
Sbjct: 777 LSSFCIVNLKQTNRARFAFTAVAGQAAENVLKTAAVL 813
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++AFVN+GM QFK+VFLG AP+ RVANSQKC+RVGGKHNDLS G D YHHT
Sbjct: 40 VPFCDPTVAFVNAGMNQFKSVFLGTAAAPHQRVANSQKCVRVGGKHNDLSVVGTDGYHHT 99
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+KR+AC MALE L + P ++ RLY T+
Sbjct: 100 FFEMLGNWSFGDYFKREACAMALELL-RGPYNIDPGRLYVTY 140
>gi|195127375|ref|XP_002008144.1| GI13332 [Drosophila mojavensis]
gi|193919753|gb|EDW18620.1| GI13332 [Drosophila mojavensis]
Length = 1009
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 313/817 (38%), Positives = 461/817 (56%), Gaps = 45/817 (5%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L ++ IR +F+DYF H V+SSP+VP+ D ++AFVN+GM QFK++FLG APY R
Sbjct: 12 LTAREIRKTFIDYFTVNHEHKFVRSSPVVPFCDPTVAFVNAGMNQFKSIFLGTAAAPYKR 71
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V NSQKCVRVGGKHNDLS G+D YHHTFFEMLGNWSF DY+KR+AC MALE L + P +
Sbjct: 72 VVNSQKCVRVGGKHNDLSVVGQDGYHHTFFEMLGNWSFGDYFKREACAMALELL-RGPYN 130
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ RLY TYF G G+P D E +IW LG P I G K NFWEMG+TGPCG
Sbjct: 131 IDPSRLYVTYFAGDKLLGIPADMECFEIWRSLGFPAARILPFGCKDNFWEMGTTGPCGPC 190
Query: 192 SEIHYDMK-GE-PSSALAR---VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
+EIH D + G+ P+S R VNA R DL E+WN+VFI + R + +I L ++DTG
Sbjct: 191 TEIHIDHRPGDGPASIEQRAKLVNAGRPDLTELWNLVFIQYNRNADGSITQLPAQHVDTG 250
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFT-TSNRTDLDTSYRMLSD 305
+GFERL +LQNK+S YDTDLF PL + I +S A Y +F N LDTSYR+L+D
Sbjct: 251 MGFERLAALLQNKSSNYDTDLFTPLFDAIHSLSKAPVYAGSFPDDQNAALLDTSYRILAD 310
Query: 306 YSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
++RM+T LAD M PD KLR V+R AL ISE VF KL+ +L + E LG+ YP
Sbjct: 311 HARMVTACLADGMLPDQNQKLRRVLRKALSISEQVF--AHDKLLSQLVPIVVETLGEAYP 368
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E+ + ++ E ++ NLR+++ K + ++ P+L+ ++ME PG V +
Sbjct: 369 EMSTKQQAVIELIAHEQEVYKNLRESSSKAFAEVLTEFPKLDDIDLMECPGFVPAYREFQ 428
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
Q + P+ T I G+ + L DTYGL++ +LA + + + + +L K ++K
Sbjct: 429 VQRSNFPNNT-IPGEFLYKLTDTYGLTEESFLKLAELENMNCDLDRYRAELALAKLKTK- 486
Query: 486 KAASNVPDIDL-----------MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ +N D DL K TD+ YKY Y YD ++ Y P L + ++GI
Sbjct: 487 EPQNNRGDFDLALQQRIADAQAQLTKRLASTDNSYKYIYSYDEENETYAIPMLKSCVLGI 546
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+ D + R AS++++ ++ +N Y +GGQ D+G+ +
Sbjct: 547 LQDDS-------EVSRVRPEASLNTL--------SIVTAASNFYFESGGQQSDLGMLLVH 591
Query: 595 NTT--QENGKVEIGELASLEGKIVHFGNVVS---SFKVTPGLTSRVEVDARMRLGCMRAH 649
N +E ++E+ + L +VH + + F + G ++EVDA+ R H
Sbjct: 592 NKQKPEEPHQLEVVGVKHLNECVVHVCRLTTPSDDFDLAVGDEVQLEVDAKHRQLNTCHH 651
Query: 650 TTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +HLLNAA+R + TYQ S V S++C L+ + G+ ++ V +E IN I +
Sbjct: 652 TATHLLNAAIRSLFNKVTYQVSSAVSSEQCKLELGLLGKRITKADVQHIEDLINRAICSA 711
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVI-LIDISDKE-NVISREPCCGTHVFNTGH 766
V + A+++ +T++PGE+YP+ + LI++ E N+ S+E CCGTHV NT
Sbjct: 712 TPVQVHQLSAADVLQQNDITMVPGEVYPEQGLRLINVQCPELNLSSKELCCGTHVTNTKE 771
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ ++ K N + + G +++ ++ L
Sbjct: 772 MSCFCIVNLKQTNRARYAFTAVAGQAAENVLKTAALL 808
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++AFVN+GM QFK++FLG APY RV NSQKC+RVGGKHNDLS G+D YHHT
Sbjct: 40 VPFCDPTVAFVNAGMNQFKSIFLGTAAAPYKRVVNSQKCVRVGGKHNDLSVVGQDGYHHT 99
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+KR+AC MALE L + P ++ RLY T+
Sbjct: 100 FFEMLGNWSFGDYFKREACAMALELL-RGPYNIDPSRLYVTY 140
>gi|195014128|ref|XP_001983963.1| GH16181 [Drosophila grimshawi]
gi|193897445|gb|EDV96311.1| GH16181 [Drosophila grimshawi]
Length = 1012
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 312/816 (38%), Positives = 458/816 (56%), Gaps = 40/816 (4%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L ++ IR +F+DYF H ++SSP+VP+ D ++AFVN+GM QFK+VFLG AP+ R
Sbjct: 12 LTAREIRKTFIDYFTANHEHKFIRSSPVVPFCDPTVAFVNAGMNQFKSVFLGTAAAPHKR 71
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V NSQKCVRVGGKHNDLS G+D YHHTFFEMLGNWSF DY+KR+AC MALE L + P +
Sbjct: 72 VVNSQKCVRVGGKHNDLSVVGQDGYHHTFFEMLGNWSFGDYFKREACAMALELL-RGPYN 130
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ RLY TYF G G+P D E DIW LG P I G K NFWEMG+TGPCG
Sbjct: 131 IDPSRLYVTYFAGDKLLGIPADMECFDIWRSLGFPAARILPFGSKDNFWEMGTTGPCGPC 190
Query: 192 SEIHYDMK--GEPSSALAR---VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
+EIH D + +P S R VNA R DL E+WN+VFI + R + +I L ++DTG
Sbjct: 191 TEIHIDHRPGSDPGSVEQRAKLVNAGRADLTELWNLVFIQYNRNTDGSITSLPAKHVDTG 250
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTS-NRTDLDTSYRMLSD 305
+GFERL +LQNK+S YDTDLF PL + I +S A YG +F + N LDTSYR+L+D
Sbjct: 251 MGFERLTALLQNKSSNYDTDLFTPLFDGIHSLSKAPVYGGSFPVAENSALLDTSYRILAD 310
Query: 306 YSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
++RM+T LAD M PD KLR V+R AL ISE VF L+ +L + E LG+ YP
Sbjct: 311 HARMVTACLADGMLPDQNQKLRRVLRKALSISEQVF--SHENLLSQLVPIVVETLGEAYP 368
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E+ + ++ E ++ NLR+++ K + ++ P L+ ++ME PG V +
Sbjct: 369 EMSSKQQAVLELIAHEQEVYKNLRESSSKIFAEVLTEFPNLDDIDLMECPGFVPAYREFQ 428
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
Q ++ + T I GD + L DTYGL+++ +LA + + E + +L K R+K
Sbjct: 429 VQRSKFANNT-IPGDFLYKLTDTYGLTEDSFVKLAELENMNCDLERYRAELALAKLRTKE 487
Query: 486 -KAASNVPDIDLMD---------LKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ S + D+ L TD+ +KY Y YD S+ Y P L++ ++GI+
Sbjct: 488 PQRNSGIYDLALQQRIAEAQAQLTMRLAATDNSHKYFYSYDAQSETYAIPTLNSRVLGII 547
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
D + +R G S D++ ++ +N Y +GGQ D+G + N
Sbjct: 548 QND----AEVSRTLGSRLGESTDTL--------SIVTAASNFYYESGGQQSDLGKLLVRN 595
Query: 596 TT--QENGKVEIGELASLEGKIVHFGNVVS---SFKVTPGLTSRVEVDARMRLGCMRAHT 650
++ ++++ + L +VH + + F++ G +EVDA+ R HT
Sbjct: 596 KQKPEQPHQLDVVGVKCLNDCVVHVCRLATPTDDFELALGDEVLLEVDAQQRQLNTCHHT 655
Query: 651 TSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
HLLNAA+R + TYQ S V SD+C L+ + G+ + V +E IN I +
Sbjct: 656 AIHLLNAAIRSLFNKVTYQVSSAVSSDQCKLELGLLGKRIQKADVEHIEDLINRAICSGS 715
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVI-LIDISDKE-NVISREPCCGTHVFNTGHI 767
V + + A+++ +T++PGE+YP+ + LI++ E N+ S+E CCGTHV NT +
Sbjct: 716 AVQVQQLSAADVLQQNDITMVPGEVYPEQGLRLINVQCPELNLSSKELCCGTHVTNTKEL 775
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
++ K N + + G +++ ++ L
Sbjct: 776 SCFCIVNLKQTNRARFAFTAVAGQAAENVLKTAALL 811
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++AFVN+GM QFK+VFLG AP+ RV NSQKC+RVGGKHNDLS G+D YHHT
Sbjct: 40 VPFCDPTVAFVNAGMNQFKSVFLGTAAAPHKRVVNSQKCVRVGGKHNDLSVVGQDGYHHT 99
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+KR+AC MALE L + P ++ RLY T+
Sbjct: 100 FFEMLGNWSFGDYFKREACAMALELL-RGPYNIDPSRLYVTY 140
>gi|321466736|gb|EFX77730.1| hypothetical protein DAPPUDRAFT_54067 [Daphnia pulex]
Length = 992
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 308/792 (38%), Positives = 450/792 (56%), Gaps = 37/792 (4%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
SK IR FLD+F H+ V SS +VPYGD S+AFVN+GM QFK +FLG + R
Sbjct: 17 SKEIREKFLDFFAKEHLHSRVPSSSVVPYGDPSLAFVNAGMNQFKPIFLGQAAPQHQRAV 76
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
NSQKC+RVGGKHNDL GRD YHHTFFEMLG+WSFNDY+K++AC MA + LT+ +P
Sbjct: 77 NSQKCIRVGGKHNDLDDVGRDGYHHTFFEMLGSWSFNDYFKKEACSMAWQLLTQ-VYRIP 135
Query: 134 LDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSE 193
+L+ TYFGG+ GLP DEE R+IWL LGV DHI GMK NFWEMG GPCG SE
Sbjct: 136 PQKLFITYFGGNQSLGLPSDEECREIWLSLGVAADHILPFGMKDNFWEMGLVGPCGPCSE 195
Query: 194 IHYDMKGEPSSALAR--VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
IH + K ++LAR VN +++EIWN+VF+ + R+S + L ++IDTG+G ER
Sbjct: 196 IHVN-KANLETSLARTLVNQGTEEVVEIWNLVFMQYNRISNQVLEKLPAHHIDTGMGLER 254
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTF-TTSNRTDLDTSYRMLSDYSRMI 310
LV LQNK S YDTDLFLPL++ + ++SG PY ++ S + D +YR+L+D+SRMI
Sbjct: 255 LVAFLQNKNSNYDTDLFLPLIDAVHQISGGVPYQGSYDMQSAQGQRDWAYRLLADHSRMI 314
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDS 370
TVALAD FPD +LR V+R A++ S F + L+ ELS +A+++G VYPE+ +
Sbjct: 315 TVALADGAFPDNNHRLRRVMRQAMVTSRKWFN-QDASLLLELSQRVADMMGGVYPELSRN 373
Query: 371 INKIQLILGEESRIF-DNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLA 429
++ + ++L E IF D+L K+ +EW +V PEL ++PGL+ G++ L +
Sbjct: 374 LSNVHMLLRFEEDIFRDHLAKSG-REWSAIVNQFPELSALPTDQQPGLIAGLRQL-EDWR 431
Query: 430 RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAAS 489
R +ISG +AF LY T+GL ++ +Q L K + F Q + + + +K ++++
Sbjct: 432 RSSGSDKISGSLAFKLYSTHGLQEDSLQLLVQLKGWNVDWPQFHQLMADERMSTKIQSSA 491
Query: 490 NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSK-RYTFPCLDTNLVGIVIGDQVFCIDKHAI 548
V V ++ N++ YTF D + +V D I
Sbjct: 492 AVSS-QFQCATSLKVAPTVWQCQDVCSRNAEGHYTFKPFDATVTALV------SQDGRTI 544
Query: 549 RHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGEL 608
A +G V +I DK+ Y AGGQ+ D G G ++ E+
Sbjct: 545 EEAATGDR-----------VAVIADKSCFYYEAGGQVSDTG-----RLLWPTGAGQVEEI 588
Query: 609 ASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQ 668
+ I H V+ + T ++ +D RL M HT +HLL+AA++ +L T Q
Sbjct: 589 RRVGDHIYHLIK-VNEGNLRVNQTVQMMLDEDNRLNTMANHTATHLLHAAIKDILKVTCQ 647
Query: 669 KSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLT 728
KS V + +F ++ +++ ++ E + + I ++ VDR + + L +T
Sbjct: 648 KSSYVTPEHFRFEFGLFQSEFTLEMISQAESSVRNWICQRLAVDRLMLPLHQAVSLDGIT 707
Query: 729 VIPGEIYPDDVILIDI---SDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSI 785
++PGE YPD V +I + S K+ IS EPCCGTHV NT +E ++ KS G RS+
Sbjct: 708 LVPGESYPDMVSVIRVAQESGKDEAISLEPCCGTHVRNTADLEEFAILSVKSAGIGSRSV 767
Query: 786 KCLTGDSSKAAV 797
+ +T ++K ++
Sbjct: 768 RAVTRATAKQSL 779
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 93/146 (63%), Gaps = 14/146 (9%)
Query: 782 VRSIKCL--TGDSSKAAVEN------GKHLSTAASFSQILNVGNIPYGDDSIAFVNSGMC 833
++ CL +G SSK E +HL + S + +PYGD S+AFVN+GM
Sbjct: 4 LKKCTCLYHSGSSSKEIREKFLDFFAKEHLHSRVPSSSV-----VPYGDPSLAFVNAGMN 58
Query: 834 QFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEMLGNWSFNDYYKR 893
QFK +FLG + R NSQKCIRVGGKHNDL GRD YHHTFFEMLG+WSFNDY+K+
Sbjct: 59 QFKPIFLGQAAPQHQRAVNSQKCIRVGGKHNDLDDVGRDGYHHTFFEMLGSWSFNDYFKK 118
Query: 894 DACRMALEFLTKPPVSLPLDRLYFTF 919
+AC MA + LT+ +P +L+ T+
Sbjct: 119 EACSMAWQLLTQ-VYRIPPQKLFITY 143
>gi|195441674|ref|XP_002068628.1| GK20581 [Drosophila willistoni]
gi|194164713|gb|EDW79614.1| GK20581 [Drosophila willistoni]
Length = 1006
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 313/820 (38%), Positives = 468/820 (57%), Gaps = 52/820 (6%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L ++ IR +F+DYF + H V+SSP+VP+ D ++AFVN+GM QFK+VFLG AP+ R
Sbjct: 12 LTAREIRKTFIDYFTISHEHKFVRSSPVVPFCDPTVAFVNAGMNQFKSVFLGTAAAPHKR 71
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V NSQKCVRVGGKHNDLS G+D YHHTFFEMLGNWSF DY+KR+AC MALE L + P +
Sbjct: 72 VVNSQKCVRVGGKHNDLSVVGQDGYHHTFFEMLGNWSFRDYFKREACSMALELL-RGPYN 130
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ RLY TYF G G+P D E +IW LG P I G + NFWEMG+TGPCG
Sbjct: 131 IDTRRLYVTYFAGDKVLGIPADLECFEIWRSLGFPSSRILPFGCRDNFWEMGTTGPCGPC 190
Query: 192 SEIHYDMKGEPSSALAR---VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
+EIH D + E +S R VNA R+DL E+WN+VFI + R S +I L +++DTG+G
Sbjct: 191 TEIHIDHQPELASVDERAKLVNAGRSDLTELWNLVFIQYNRHSDGSITQLPSHHVDTGMG 250
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
FERL ILQNK+S YDTDLF P+ ++I ++S A Y +F LDTSYR+L+D++R
Sbjct: 251 FERLTAILQNKSSNYDTDLFTPIFDSIHQLSRAPAYTGSFQKD--AVLDTSYRILADHAR 308
Query: 309 MITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
MIT LAD M PD KLR V+R AL +SE VF Q L+ L + E LG+ YPE+
Sbjct: 309 MITTCLADGMLPDQNQKLRRVLRKALNLSEHVF--AQENLLSRLVPIVVETLGEAYPEMS 366
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+ + ++ E ++ NLR+++ K + ++ P+L+ ++ME PG V + Q
Sbjct: 367 IKQSDVIELINHEHDVYKNLRESSSKAFAEVLTEFPKLDDIDLMECPGFVPAYREFQVQR 426
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAA 488
++ + T I GD + L DTYGL++ +LA + + E + ++ K R K K
Sbjct: 427 SKFNNNT-IPGDFLYKLTDTYGLTEESFVKLAELENMNCDLERYRAEVAMAKTRMK-KGR 484
Query: 489 SNVPDIDLMD---------LKHFPV-TDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
NV D D + + TD+ KY+YHYD ++ Y FP L T ++G+++
Sbjct: 485 ENVAHTDDDDSIADAQVQLTQRLSISTDNSPKYNYHYDQTNESYEFPQLKTRVLGLLL-- 542
Query: 539 QVFCIDKHAIRHARSGASIDSI-QLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
+ ++SI L+ + + ++ + +N Y +GGQ +D G L +
Sbjct: 543 --------------NAKEVNSIGHLKQSDTISIVTEASNFYYESGGQEEDKG-HLLVRSK 587
Query: 598 QENGK--VEIGELASLEGKIVHFGNVVSS---------FKVTPGLTSRVEVDARMRLGCM 646
+E+ K +++ + L +VH + S F+++ G + V+A R
Sbjct: 588 EEDSKKQLQVESVKHLNNCVVHICRLGPSETEPTQSEEFQLSLGDEVELLVNAEHRQLNT 647
Query: 647 RAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI 705
HT +HLLNAA+R + TYQ S V S++C L+ +V G+ L V +E IN +I
Sbjct: 648 CHHTATHLLNAAIRCLFHKVTYQVSSSVTSEQCKLELAVLGKRLQKTDVELIEDLINRLI 707
Query: 706 ANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVI-LIDI-SDKENVISREPCCGTHVFN 763
V V+ + A+++ +T++PGE+YP+ + L+ + SD+ ++S+E CCGTHV N
Sbjct: 708 CLGVPVEVDQLNAAQVLQQNDITMVPGEVYPEQGLRLVQVASDELKLLSKELCCGTHVTN 767
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
T + ++ K N + + G +++ ++ L
Sbjct: 768 TRELSCFCIVNLKQTNRARFAFTAVAGQAAEHVLKTAALL 807
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++AFVN+GM QFK+VFLG AP+ RV NSQKC+RVGGKHNDLS G+D YHHT
Sbjct: 40 VPFCDPTVAFVNAGMNQFKSVFLGTAAAPHKRVVNSQKCVRVGGKHNDLSVVGQDGYHHT 99
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+KR+AC MALE L + P ++ RLY T+
Sbjct: 100 FFEMLGNWSFRDYFKREACSMALELL-RGPYNIDTRRLYVTY 140
>gi|270010617|gb|EFA07065.1| hypothetical protein TcasGA2_TC010044 [Tribolium castaneum]
Length = 977
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 320/807 (39%), Positives = 444/807 (55%), Gaps = 60/807 (7%)
Query: 6 ISSYVR--LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG 63
IS YV K+IR FLDYF N H +KSSP+VP+ D ++AFVN+GM
Sbjct: 18 ISKYVDKDRTGKAIRQKFLDYFINKNNHNFIKSSPVVPFCDPTVAFVNAGM--------- 68
Query: 64 LTPAPYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALE 123
+QKC+RVGGKHNDL+ G D YHHTFFEMLGNWSF DY+K++AC +A +
Sbjct: 69 -----------NQKCIRVGGKHNDLNVVGGDGYHHTFFEMLGNWSFGDYFKQEACELAWK 117
Query: 124 FLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMG 183
LT+ P RLY TYF G G+ D ET++IW +GV D I K NFWEMG
Sbjct: 118 LLTEEYKIHP-SRLYVTYFKGDPVLGIDEDLETKEIWKTIGVSEDRILPFTSKDNFWEMG 176
Query: 184 STGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYI 243
TGPCG +EIH D + A VN +DL E+WN+VFI + R S +++ L + ++
Sbjct: 177 PTGPCGPCTEIHIDHTTSNNRA-KLVNKGLHDLTELWNLVFIQYNRKSNESVDLLPEKHV 235
Query: 244 DTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKP-YGRTFTTSNRTDLDTSYRM 302
DTG+GFERL +LQ K S YDTD F LL+ I K P Y TF + LD SYR+
Sbjct: 236 DTGMGFERLTAVLQGKISNYDTDNFTYLLKAIHKNCSKIPEYRGTFGEKDWNSLDASYRV 295
Query: 303 LSDYSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
L+D++RM+TV LAD M P+ KLR V+R A L+ E+VF G L+KELS + E LG
Sbjct: 296 LADHARMVTVCLADAMIPEQNQKLRRVMRRAFLLCENVFNKDSG-LLKELSNYVIEHLGC 354
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
VYPE++ ++ +I I+ E ++ ++RK A +EW L K QP+L +I E P LV G K
Sbjct: 355 VYPEMERNVKQIHQIIDYEEEVYKSVRKQATEEWVKLAKHQPKLLSLDINENPSLVAGYK 414
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
++ + +P I +AF LYDT+GL ++ I LA L ++L K R
Sbjct: 415 EIS---STNPKF--IDAQLAFKLYDTFGLDEDSISSLAQILNLPFNASDLHKQLELAKIR 469
Query: 483 SKAKAASNVPDI-DLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
SK + + P++ + + P TD Y+Y ++Y F L+ ++ IV
Sbjct: 470 SKEQGLVSGPNVYEQLTRAKVPKTDRSTLYNYA--KKGEKYVFDDLEVVILKIV------ 521
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
D +R Q+E + GL+ DK++ Y AGGQI D G +
Sbjct: 522 -KDSKLVR-----------QIESENFYGLVLDKSSFYTEAGGQISDRGAINFGDCV---- 565
Query: 602 KVEIGELASLEGKIVHFGNVVS--SFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
E+ E G I+H G + S S +V G+T +++D RL MR HT HLLN+ L
Sbjct: 566 -FEVTEAQDCNGYILHKGFLRSGESGRVKVGMTGSLKIDPDFRLKNMRNHTAVHLLNSVL 624
Query: 660 RRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
++V T QKS +V + LD ++ E LS+D + VE I VI ++ V+ + +
Sbjct: 625 KKVKGATCQKSSKVTQNYFNLDVGIFAEKLSLDELELVESTITKVIQGRLPVNISELDSQ 684
Query: 720 ELPFLTHLTVIPGEIYPDDVI-LIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
L L + +IPGE+YP+ I ++++ E +SREPCCGTHV NT IE ++ KS
Sbjct: 685 RLANLDEIILIPGEVYPETGIRVVEVKGGEGFLSREPCCGTHVLNTSDIEDFCIVSMKSL 744
Query: 779 NHGVRSIKCLTGDSSKAAVENGKHLST 805
SI +TGD +K A NG HL T
Sbjct: 745 GRSTTSIHGVTGDRAKVAKSNGTHLLT 771
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 64/102 (62%), Gaps = 21/102 (20%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++AFVN+GM +QKCIRVGGKHNDL+ G D YHHT
Sbjct: 54 VPFCDPTVAFVNAGM--------------------NQKCIRVGGKHNDLNVVGGDGYHHT 93
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+K++AC +A + LT+ P RLY T+
Sbjct: 94 FFEMLGNWSFGDYFKQEACELAWKLLTEEYKIHP-SRLYVTY 134
>gi|195376313|ref|XP_002046941.1| GJ13159 [Drosophila virilis]
gi|194154099|gb|EDW69283.1| GJ13159 [Drosophila virilis]
Length = 1009
Score = 540 bits (1392), Expect = e-150, Method: Compositional matrix adjust.
Identities = 308/817 (37%), Positives = 454/817 (55%), Gaps = 45/817 (5%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L ++ IR F+DYF H V+SSP+VP+ D ++AFVN+GM QFK VFLG APY R
Sbjct: 12 LTAREIRKIFIDYFTVNHEHKFVRSSPVVPFCDPTVAFVNAGMNQFKTVFLGTAAAPYKR 71
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V NSQKCVRVGGKHNDLS G+D YHHTFFEMLGNWSF DY+KR+AC MALE L + P +
Sbjct: 72 VVNSQKCVRVGGKHNDLSVVGQDGYHHTFFEMLGNWSFGDYFKREACAMALELL-RGPYN 130
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ RLY TYF G G+P D E +IW LG P + + G K NFWEMG+TGPCG
Sbjct: 131 IDPSRLYVTYFAGDKLLGIPADLECFEIWRSLGFPAERVLPFGCKDNFWEMGTTGPCGPC 190
Query: 192 SEIHYDMK--GEPSSALAR---VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
+EIH D + P+S R VNA R DL E+WN+VFI + R + +I L ++DTG
Sbjct: 191 TEIHIDHRPGSGPNSVEQRAKLVNAGRADLTELWNLVFIQYNRNADGSITQLPARHVDTG 250
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFT-TSNRTDLDTSYRMLSD 305
+GFERL +LQNK+S YDTDLF PL + I +S A YG +F N LDTSYR+L+D
Sbjct: 251 MGFERLAALLQNKSSNYDTDLFTPLFDGIHSLSKAPVYGGSFPDAQNSALLDTSYRILAD 310
Query: 306 YSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
++RM+T LAD M PD KLR V+R AL ISE VF KL+ +L + E LG+ YP
Sbjct: 311 HARMVTACLADGMLPDQNQKLRRVLRKALSISEQVF--GHEKLLSQLVPIVVETLGEAYP 368
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E+ + ++ E ++ NLR+++ K + ++ P+L+ ++ME PG V +
Sbjct: 369 EMSTKQQAVIELILHEQEVYKNLRESSSKAFAEVLTEFPKLDDIDLMECPGFVPAYREFQ 428
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
Q + P+ T I GD + L DTYGL++ +LA + + + + +L K ++K
Sbjct: 429 VQRSNFPNNT-IPGDFLYKLTDTYGLTEESFLKLAELENMNCDLDRYRAELALAKLKTKE 487
Query: 486 KAASN----------VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
S+ + D K TD+ +KY Y YD ++ Y+ P + + ++G++
Sbjct: 488 PQRSSGDYDLALQQRIADAQAQLTKRLAPTDNSHKYIYSYDEANETYSIPTVTSRVLGML 547
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNA-WVGLIFDKTNLYATAGGQIDDIGVAYLT 594
D + +LE + ++ +N Y +GGQ D+G +
Sbjct: 548 QND----------------VEVSRTRLEEPLNTLSIVTAASNFYYESGGQQSDLGKLLVR 591
Query: 595 NT--TQENGKVEIGELASLEGKIVHFGNVVSS---FKVTPGLTSRVEVDARMRLGCMRAH 649
NT +E ++E+ + L +VH ++S F++ G ++EVDA R H
Sbjct: 592 NTHKPEEPHQLEVVGVKHLNDCVVHVCRPITSADDFELAVGDEVQLEVDAMQRQLNTCHH 651
Query: 650 TTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +HLLNAA+R + TYQ S V ++C L+ + G+ + V +E IN I +
Sbjct: 652 TATHLLNAAIRSLFNKVTYQVSSAVSGEQCKLELGLLGKRIQKADVQHIEDLINRAICSA 711
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVI-LIDISDKE-NVISREPCCGTHVFNTGH 766
V + + A+++ +T++PGE+YP+ + LI + E ++ S+E CCGTHV NT
Sbjct: 712 TPVQVQELSAADVLQQNDITMVPGEVYPEQGLRLIKVQCPELSLSSKELCCGTHVTNTKE 771
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ ++ K N + + G +++ ++ L
Sbjct: 772 LSCFCIVNLKQTNRARFAFTAVAGQAAENVLKTAALL 808
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 80/102 (78%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++AFVN+GM QFK VFLG APY RV NSQKC+RVGGKHNDLS G+D YHHT
Sbjct: 40 VPFCDPTVAFVNAGMNQFKTVFLGTAAAPYKRVVNSQKCVRVGGKHNDLSVVGQDGYHHT 99
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+KR+AC MALE L + P ++ RLY T+
Sbjct: 100 FFEMLGNWSFGDYFKREACAMALELL-RGPYNIDPSRLYVTY 140
>gi|194866940|ref|XP_001971973.1| GG15263 [Drosophila erecta]
gi|190653756|gb|EDV50999.1| GG15263 [Drosophila erecta]
Length = 1012
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 308/819 (37%), Positives = 458/819 (55%), Gaps = 44/819 (5%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L ++ IR +FLD+F GH V+SSP+VP+ D ++AFVN+GM QFK+VFLG AP+ R
Sbjct: 12 LTAREIRKTFLDHFTVNHGHKFVRSSPVVPFCDPTVAFVNAGMNQFKSVFLGTAAAPHKR 71
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VAN+QKCVRVGGKHNDLS G D YHHTFFEMLGNWSF DY+KR+AC MALE L + P +
Sbjct: 72 VANTQKCVRVGGKHNDLSVVGTDGYHHTFFEMLGNWSFGDYFKREACAMALELL-RGPYN 130
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ RLY TYF G G+P D E +IW LG P I G NFWEMG+TGPCG
Sbjct: 131 IDPGRLYVTYFAGDKVLGIPADLECFEIWRSLGFPASRILPFGCADNFWEMGATGPCGPC 190
Query: 192 SEIHYDMKGEPSSALAR---VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
+EIH D + + S R VNA R DL E+WN+VFI + R + +I L +++DTG+G
Sbjct: 191 TEIHIDHRPDLGSVEQRAKLVNAGRCDLTELWNLVFIQYNRHADGSISRLPAHHVDTGMG 250
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTD-LDTSYRMLSDYS 307
FERL +LQNK+S YDTDLF PL + I++ + Y +F + LDTSYR+L+D++
Sbjct: 251 FERLTAVLQNKSSNYDTDLFTPLFDGIQQAAKTPAYSGSFPDAGSAALLDTSYRILADHA 310
Query: 308 RMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
RM+T LAD M PD KLR V+R AL ISE VF KL+ +L + E LG+ YPE+
Sbjct: 311 RMVTACLADGMLPDQNQKLRRVLRKALNISEHVF--GHDKLLTQLVPVVVETLGEAYPEM 368
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ ++ E ++ NLR+++ K + ++ P L+ ++ME PG V + Q
Sbjct: 369 AAKQQAVIDLISHEQEVYKNLRESSSKAFAEVLMEFPNLDDIDLMECPGFVPAYREFQVQ 428
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
+ P+ T I G+ + L DTYGL++ +LA + ++ E + +++ K ++K+ +
Sbjct: 429 RGKFPNNT-IPGEFLYKLTDTYGLTEESFLKLAELENMSCDLERYRAEVSLAKIKAKS-S 486
Query: 488 ASNVPDIDLMDL--------------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
+P L DL K TD+ +KY Y +D S Y P L T +VG
Sbjct: 487 QREIPGGSLCDLANEQRIAEAQAMLTKRLAPTDNSHKYAYSFDKESNSYQIPPLKTRVVG 546
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
+++ D +R+ S IQ ++ ++ ++ Y +GGQ D G L
Sbjct: 547 MLLNDAEV---------SRTQGS--RIQQPTTDFISIVTAASSFYYESGGQQSD-GGKIL 594
Query: 594 TNTTQENGKVEIGELAS---LEGKIVHFGNVVS---SFKVTPGLTSRVEVDARMRLGCMR 647
+ Q+ + ++ S L +VH + S +F++ G ++VDA+ R
Sbjct: 595 VRSHQQPAHPHLLDVISVKYLNDCVVHVCKLSSPTDAFQLAIGDEVELQVDAQQRQLNTC 654
Query: 648 AHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIA 706
HT +HLLNAA+R + TYQ S V S +C L+ + G+ + V +E IN VI
Sbjct: 655 HHTATHLLNAAIRSLFKKVTYQVSSSVTSGQCKLELGLLGKRIQKSDVQLIEDLINRVIC 714
Query: 707 NQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVI-LIDISDKE-NVISREPCCGTHVFNT 764
+ V + + A+E+ +T++PGE+YP+ + L+++ E + S+E CCGTH NT
Sbjct: 715 SATPVQVQVLSAAEVLQQNDITMVPGEVYPEQGLRLVNVESPELQLSSKELCCGTHATNT 774
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ S ++ K N + + G +++ ++ L
Sbjct: 775 SELSSFCIVNLKQTNRARFAFTAVAGQAAENVLKTAALL 813
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++AFVN+GM QFK+VFLG AP+ RVAN+QKC+RVGGKHNDLS G D YHHT
Sbjct: 40 VPFCDPTVAFVNAGMNQFKSVFLGTAAAPHKRVANTQKCVRVGGKHNDLSVVGTDGYHHT 99
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+KR+AC MALE L + P ++ RLY T+
Sbjct: 100 FFEMLGNWSFGDYFKREACAMALELL-RGPYNIDPGRLYVTY 140
>gi|345495314|ref|XP_001606952.2| PREDICTED: alanyl-tRNA synthetase, mitochondrial-like [Nasonia
vitripennis]
Length = 980
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 293/681 (43%), Positives = 409/681 (60%), Gaps = 35/681 (5%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
+K IR+ FL+YF H +V+SSP+VP D SI FVN+GM QFK V LG P RVA
Sbjct: 34 AKLIRTEFLEYFAKN-NHAIVRSSPVVPLNDPSIPFVNAGMNQFKGVLLGDHSPPAFRVA 92
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
NSQKC+RVGGKHNDL G DSYHHTFFEMLGNWSF DY+K +AC+ A E LT+ +
Sbjct: 93 NSQKCIRVGGKHNDLDIVGNDSYHHTFFEMLGNWSFGDYFKEEACKYAWELLTEI-YGIK 151
Query: 134 LDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSE 193
D LY TYF G+++ L D E ++IWL++GVP+DHI G++ NFWEMG TGPCG +E
Sbjct: 152 KDFLYVTYFKGNEKLNLQPDLECKEIWLKIGVPKDHILPFGIEDNFWEMGPTGPCGPCTE 211
Query: 194 IHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLV 253
IH D + + +RVN +DL E+WN+VF+ ++R+ I+PL K +IDTG+GFERLV
Sbjct: 212 IHIDHTMQSKNQASRVNKGHDDLTELWNVVFVQYQRLQNGRIIPLLKKHIDTGMGFERLV 271
Query: 254 TILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVA 313
T+LQ K S YDTD+F PL E IEK + A Y F T+++ +DT YR+L+D++RM+TVA
Sbjct: 272 TVLQEKRSNYDTDIFQPLFEAIEKFTHAPKYQGRFGTADKNKIDTGYRILADHARMVTVA 331
Query: 314 LADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINK 373
LAD M PD KLR ++R A+ ISE+ FK Q L+ EL+ ++A LGDVYPEI ++NK
Sbjct: 332 LADGMLPDKNQKLRRILRKAIDISEESFKTSQ--LLSELTNHVAFSLGDVYPEIYKNLNK 389
Query: 374 IQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPS 433
IQ I+ E + + R A K W+ +V+ +PEL PGL G L L +
Sbjct: 390 IQHIIQYEEEVMKSARNNAAKNWRKVVENRPELSAITDATLPGLTAGYYELQTFLKSEYK 449
Query: 434 ITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPD 493
+ + GD A+ LYDTYGL+ I +LA + + + F++ + + +ERS+ KA +
Sbjct: 450 VNSLPGDFAYKLYDTYGLNSETICKLAEIESIPFDLKTFKEAIEKARERSRHKADKLNDE 509
Query: 494 I------DLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG-------DQV 540
I +L++ + P TDD KYD Y K Y FP + +VG+++ +
Sbjct: 510 IISEYSLNLLESGNVPKTDDLLKYD--YTITEKGYQFPVVKCKIVGMIMNGNLISEPETA 567
Query: 541 FCIDK-HAIRHA---RSGASIDSIQ-LEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
F +D+ I A SG ++S + NA VG+I DKT Y+TAG QI D G + +
Sbjct: 568 FNVDESQTIVEATVTNSGNIVESSAVVTTNAEVGIILDKTPAYSTAGSQISDKGHIQIKD 627
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTP------GLTSRVEVDARMRLGCMRAH 649
KV + ++H G+ V + P G + +D ++RLG MR H
Sbjct: 628 LLFNFEKVR-----KIRDYVIHIGHFVDWDEANPEHELQVGDECLISIDEKIRLGAMRHH 682
Query: 650 TTSHLLNAALRRVLTCTYQKS 670
T +HLLNA+L+++L Q +
Sbjct: 683 TATHLLNASLQQILPVVGQHT 703
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D SI FVN+GM QFK V LG P RVANSQKCIRVGGKHNDL G DSYHHT
Sbjct: 59 VPLNDPSIPFVNAGMNQFKGVLLGDHSPPAFRVANSQKCIRVGGKHNDLDIVGNDSYHHT 118
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+K +AC+ A E LT+ + D LY T+
Sbjct: 119 FFEMLGNWSFGDYFKEEACKYAWELLTE-IYGIKKDFLYVTY 159
Score = 43.9 bits (102), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 752 SREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQ 811
S+E CCGTHV TG +E + KS S+K +TG +++ A G +L +
Sbjct: 717 SKEACCGTHVHKTGDLEHFCITSLKSLGSVSMSLKAITGPAARLARLAGDNLK-----DR 771
Query: 812 ILNVGN 817
ILN+ N
Sbjct: 772 ILNIEN 777
>gi|194750281|ref|XP_001957556.1| GF23971 [Drosophila ananassae]
gi|190624838|gb|EDV40362.1| GF23971 [Drosophila ananassae]
Length = 1011
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 311/818 (38%), Positives = 455/818 (55%), Gaps = 43/818 (5%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L ++ IR +FLD+F + GH V+SSP+VP+ D ++AFVN+GM QFK+VFLG AP+ R
Sbjct: 12 LTAREIRKTFLDHFTVSHGHKFVRSSPVVPFCDPTVAFVNAGMNQFKSVFLGTAAAPHKR 71
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V NSQKCVRVGGKHNDLS G D YHHTFFEMLGNWSF DY+KR+AC MALE L + P +
Sbjct: 72 VVNSQKCVRVGGKHNDLSVVGSDGYHHTFFEMLGNWSFGDYFKREACAMALELL-RGPYN 130
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ RLY TYF G G+P D E +IW LG P I G K NFWEMG+TGPCG
Sbjct: 131 IDPGRLYVTYFAGDKVLGIPADSECFEIWRSLGFPASRILPFGCKDNFWEMGATGPCGPC 190
Query: 192 SEIHYDMKGEPSSALAR---VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
+EIH D + + S R VNA R+DL E+WN+VFI + R + +I L +++DTG+G
Sbjct: 191 TEIHIDHRPDLGSVEQRAKLVNAGRSDLTELWNLVFIQYNRHADGSISQLPAHHVDTGMG 250
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTT-SNRTDLDTSYRMLSDYS 307
FERL +LQNK S YDTDLF P+ + I++V+ A YG +F +N LDT+YR+L+D++
Sbjct: 251 FERLTAVLQNKHSNYDTDLFTPIFDGIQQVAKAPVYGGSFPDGANEALLDTNYRILADHA 310
Query: 308 RMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
RM+T LAD M PD KLR V+R AL ISE VF + L+ +L + E LG+ YPE+
Sbjct: 311 RMVTACLADGMLPDQNQKLRRVLRKALNISEHVF--AKENLLTQLIPIVVETLGEAYPEM 368
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ ++ E ++ NLR+++ K + ++ P L+ ++ME PG V + Q
Sbjct: 369 SAKQQAVVDLIQHEQEVYKNLRESSSKAFAEVLTEFPNLDDIDLMECPGFVPAYREFQVQ 428
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
++ + T I GD + L DTYGL++ +LA + + E + +++ K KAK+
Sbjct: 429 RSKFNNNT-IPGDFLYKLTDTYGLTEESFLKLAELENMNCDLERYRAEVSLAK--IKAKS 485
Query: 488 ASNVPDIDLMDL--------------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
L DL K TD+ +KY Y +D S Y P L T ++G
Sbjct: 486 IQREEGASLYDLVTEQRIAEAQAKMTKRLTATDNSHKYSYTFDKESSSYEIPPLRTRVMG 545
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
+++ D +R+ S +Q + L+ +N Y +GGQ D G +
Sbjct: 546 LLLNDAEV---------SRTQGS--RLQDPTTDTISLVTAASNFYYESGGQQSDGGKILV 594
Query: 594 TNTTQENGK--VEIGELASLEGKIVH---FGNVVSSFKVTPGLTSRVEVDARMRLGCMRA 648
NT Q + +++ + +L +VH + V +F++ G + VD R
Sbjct: 595 QNTHQPDQPHLLDVISVKNLNDCVVHVCRLSSPVDAFELAIGDDVELVVDPTQRQLNTCH 654
Query: 649 HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
HT +HLLNAA+R + TYQ S V SD+C L+ + G+ + V +E IN VI
Sbjct: 655 HTATHLLNAAIRTLFDKVTYQVSSSVTSDQCKLEVGLLGKRIKKSDVQLIEDLINRVICA 714
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPDDVI-LIDISDKE-NVISREPCCGTHVFNTG 765
V + A+E+ +T++PGE+YP+ + L+ + E ++ S+E CCGTH NT
Sbjct: 715 ATPVKVERLCAAEVLQQNDITMVPGEVYPEQGLRLVHVQSPELHLNSKELCCGTHATNTS 774
Query: 766 HIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ ++ K N S + G +++ ++ L
Sbjct: 775 ELSCFCIVNLKQTNRARFSFTAVAGQAAENVLKTAALL 812
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 80/102 (78%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++AFVN+GM QFK+VFLG AP+ RV NSQKC+RVGGKHNDLS G D YHHT
Sbjct: 40 VPFCDPTVAFVNAGMNQFKSVFLGTAAAPHKRVVNSQKCVRVGGKHNDLSVVGSDGYHHT 99
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+KR+AC MALE L + P ++ RLY T+
Sbjct: 100 FFEMLGNWSFGDYFKREACAMALELL-RGPYNIDPGRLYVTY 140
>gi|6176438|gb|AAF05591.1|AF188716_1 alanyl-tRNA synthetase [Drosophila melanogaster]
Length = 1012
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 306/817 (37%), Positives = 454/817 (55%), Gaps = 40/817 (4%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L ++ IR +FLD+F GH V+SSP+VP+ D ++AFVN+GM QFK+VFLG AP+ R
Sbjct: 12 LTAREIRKTFLDHFTVNHGHKFVRSSPVVPFCDPTVAFVNAGMNQFKSVFLGTAAAPHKR 71
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V NSQKCVRVGGKHNDLS G D YHHTFFEMLGNWSF DY+KR+AC MALE L + P +
Sbjct: 72 VVNSQKCVRVGGKHNDLSVVGTDGYHHTFFEMLGNWSFGDYFKREACAMALELL-RGPYN 130
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ RLY TYF G G+P D E +IW LG P I G NFWEMG+TGPCG
Sbjct: 131 IDPGRLYVTYFAGDKVLGIPADLECFEIWRSLGFPASRILPFGCADNFWEMGATGPCGPC 190
Query: 192 SEIHYDMKGEPSSALAR---VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
+EIH D + + S R VNA R+DL E+WN+VFI + R + +I L +++DTG+G
Sbjct: 191 TEIHIDHRPDLGSVEQRAKLVNAGRSDLTELWNLVFIQYNRHADGSISQLPAHHVDTGMG 250
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTT-SNRTDLDTSYRMLSDYS 307
FERL +LQNK+S YDTDLF P+ + I++ + Y +F N LDTSYR+L+D++
Sbjct: 251 FERLTAVLQNKSSNYDTDLFTPIFDGIQQAAKTPVYSGSFPDGGNAAVLDTSYRILADHA 310
Query: 308 RMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
RM+T LAD M PD KLR V+R AL ISE VF KL+ +L + E LG+ YPE+
Sbjct: 311 RMVTACLADGMLPDQNQKLRRVLRKALNISEHVF--AHDKLLTQLVPIVVETLGEAYPEM 368
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ ++ E ++ NLR+++ K + ++ P L+ ++ME PG V + L Q
Sbjct: 369 AAKQQAVIDLICHEQEVYKNLRESSSKAFAEVLMEFPNLDDIDLMECPGFVPAYRELQMQ 428
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK- 486
+ + T I GD + L DTYGL++ +LA + + E + ++N K ++K
Sbjct: 429 RCKFSNNT-IPGDFLYKLTDTYGLTEESFLKLAELENMNCDLERYRAEVNLAKLKAKGNQ 487
Query: 487 ------------AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ + M K TD+ +KY Y +D S Y P L T ++G+
Sbjct: 488 RETAGGSLCDLATEQRIAEAQAMLTKRLTPTDNSHKYTYSFDKESDSYQIPPLKTRVLGM 547
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
++ D +R+ S IQ + ++ +N Y +GGQ D G ++
Sbjct: 548 LLNDAEV---------SRTQGS--RIQQPFTDLISIVTAGSNFYYESGGQQSDGGKILVS 596
Query: 595 NTTQEN--GKVEIGELASLEGKIVHFGNVVS---SFKVTPGLTSRVEVDARMRLGCMRAH 649
N Q + +++ + L +VH + S +F++ G ++VDA+ R H
Sbjct: 597 NHQQPDHPHSLDVIGVKHLNDCVVHICKLSSPTDAFQLAIGDEVELQVDAQQRQLNTCHH 656
Query: 650 TTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +HLLNAA+R + TYQ S V SD+C L+ + G+ + V +E IN VI +
Sbjct: 657 TATHLLNAAIRSLFKKVTYQVSSSVSSDQCKLELGLLGKRIQKTDVQLIEDLINRVICSA 716
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVI-LIDISDKE-NVISREPCCGTHVFNTGH 766
V+ + + A+E+ +T++PGE+YP+ + L+++ E + S+E CCGTH NT
Sbjct: 717 APVEVQLLSAAEVLEQNDITMVPGEVYPEQGLRLVNVESPELQLSSKELCCGTHATNTSE 776
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ ++ K N + + G +++ ++ L
Sbjct: 777 LSCFCIVNLKQTNRARFAFTAVAGQAAENVLKTAALL 813
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 80/102 (78%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++AFVN+GM QFK+VFLG AP+ RV NSQKC+RVGGKHNDLS G D YHHT
Sbjct: 40 VPFCDPTVAFVNAGMNQFKSVFLGTAAAPHKRVVNSQKCVRVGGKHNDLSVVGTDGYHHT 99
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+KR+AC MALE L + P ++ RLY T+
Sbjct: 100 FFEMLGNWSFGDYFKREACAMALELL-RGPYNIDPGRLYVTY 140
>gi|195337619|ref|XP_002035426.1| GM14698 [Drosophila sechellia]
gi|194128519|gb|EDW50562.1| GM14698 [Drosophila sechellia]
Length = 1012
Score = 537 bits (1383), Expect = e-149, Method: Compositional matrix adjust.
Identities = 307/817 (37%), Positives = 452/817 (55%), Gaps = 40/817 (4%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L ++ IR +FLD+F GH V+SSP+VP+ D ++AFVN+GM QFK+VFLG AP+ R
Sbjct: 12 LTAREIRKTFLDHFTVNHGHKFVRSSPVVPFCDPTVAFVNAGMNQFKSVFLGTAAAPHKR 71
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V NSQKCVRVGGKHNDLS G D YHHTFFEMLGNWSF DY+KR+AC MALE L + P +
Sbjct: 72 VVNSQKCVRVGGKHNDLSVVGTDGYHHTFFEMLGNWSFGDYFKREACAMALELL-RGPFN 130
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ RLY TYF G G+P D E +IW LG P I G NFWEM +TGPCG
Sbjct: 131 IDPGRLYVTYFAGDKVLGIPADLECFEIWRSLGFPASRILPFGCADNFWEMSATGPCGPC 190
Query: 192 SEIHYDMKGEPSSALAR---VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
+EIH D + + S R VNA R+DL E+WN+VFI + R + +I L +++DTG+G
Sbjct: 191 TEIHIDHRPDLGSVEQRAKLVNAGRSDLTELWNLVFIQYNRHADGSISQLPAHHVDTGMG 250
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTT-SNRTDLDTSYRMLSDYS 307
FERL +LQNK+S YDTDLF P+ + I++ + A Y +F N LDTSYR+L+D++
Sbjct: 251 FERLTAVLQNKSSNYDTDLFTPIFDGIQQAAKAPVYSGSFPDGGNAAVLDTSYRILADHA 310
Query: 308 RMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
RM+T LAD M PD KLR V+R AL ISE VF KL+ +L + E LG+ YPE+
Sbjct: 311 RMVTACLADGMLPDQNQKLRRVLRKALNISEHVF--AHDKLLTQLVPIVVETLGEAYPEM 368
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ ++ E ++ NLR+++ K + ++ P L+ ++ME PG V + Q
Sbjct: 369 AAKQQAVIDLICHEQEVYKNLRESSSKAFAEVLMEFPNLDDIDLMECPGFVPAYREFQVQ 428
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF--EQKLNELKERSKA 485
+ + T I GD + L DTYGL++ +LA + + E + E L ++K +
Sbjct: 429 RCKFSNNT-IPGDFLYKLTDTYGLTEESFLKLAELENMNCDLERYRAEVSLAKIKAKGNQ 487
Query: 486 KAASNVPDIDL-----------MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ + DL M KH TD+ +KY Y + S Y P L T ++G+
Sbjct: 488 RETAGGSLCDLATEQRLSEAQAMLTKHLGATDNSHKYAYSFHKESDSYQIPPLKTRVLGM 547
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
++ D +R+ S IQ + ++ +N Y +GGQ D G ++
Sbjct: 548 LLNDAEV---------SRTQGS--RIQQPSTDLISIVTAASNFYYESGGQQSDGGKILVS 596
Query: 595 NTTQEN--GKVEIGELASLEGKIVHFGNVVS---SFKVTPGLTSRVEVDARMRLGCMRAH 649
N Q +E+ + L +VH + S +F++ G + VDA+ R H
Sbjct: 597 NHQQPEHPHSLEVISVKHLNDCVVHVCKLSSPTDAFQLAIGDEVELLVDAQQRQLNTCHH 656
Query: 650 TTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +HLLNAA+R + TYQ S V S++C L+ + G+ + V +E IN VI +
Sbjct: 657 TATHLLNAAIRSLFKKVTYQVSSSVTSNQCKLELGLLGKRIQKSDVKLIEDLINRVICSA 716
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVI-LIDISDKE-NVISREPCCGTHVFNTGH 766
V+ + + A+E+ +T++PGE+YP+ + L+++ E + S+E CCGTH NT
Sbjct: 717 APVEVQLLSAAEVLEQNDITMVPGEVYPEQGLRLVNVESPELQLSSKELCCGTHATNTSE 776
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ ++ K N + + G +++ ++ L
Sbjct: 777 LSCFCIVNLKQTNRARFAFTAVAGQAAENVLKTAALL 813
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 80/102 (78%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++AFVN+GM QFK+VFLG AP+ RV NSQKC+RVGGKHNDLS G D YHHT
Sbjct: 40 VPFCDPTVAFVNAGMNQFKSVFLGTAAAPHKRVVNSQKCVRVGGKHNDLSVVGTDGYHHT 99
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+KR+AC MALE L + P ++ RLY T+
Sbjct: 100 FFEMLGNWSFGDYFKREACAMALELL-RGPFNIDPGRLYVTY 140
>gi|24658214|ref|NP_523932.2| mitochondrial alanyl-tRNA synthetase [Drosophila melanogaster]
gi|74870584|sp|Q9VRJ1.1|SYAM_DROME RecName: Full=Alanine--tRNA ligase, mitochondrial; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS; Flags:
Precursor
gi|7295490|gb|AAF50804.1| mitochondrial alanyl-tRNA synthetase [Drosophila melanogaster]
gi|21711683|gb|AAM75032.1| LD11251p [Drosophila melanogaster]
gi|25012817|gb|AAN71499.1| RE74040p [Drosophila melanogaster]
gi|220943558|gb|ACL84322.1| Aats-ala-m-PA [synthetic construct]
Length = 1012
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 309/817 (37%), Positives = 455/817 (55%), Gaps = 40/817 (4%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L ++ IR +FLD+F GH V+SSP+VP+ D ++AFVN+GM QFK+VFLG AP+ R
Sbjct: 12 LTAREIRKTFLDHFTVNHGHKFVRSSPVVPFCDPTVAFVNAGMNQFKSVFLGTAAAPHKR 71
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V NSQKCVRVGGKHNDLS G D YHHTFFEMLGNWSF DY+KR+AC MALE L + P +
Sbjct: 72 VVNSQKCVRVGGKHNDLSVVGTDGYHHTFFEMLGNWSFGDYFKREACAMALELL-RGPYN 130
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ RLY TYF G G+P D E +IW LG P I G NFWEMG+TGPCG
Sbjct: 131 IDPGRLYVTYFAGDKVLGIPADLECFEIWRSLGFPASRILPFGCADNFWEMGATGPCGPC 190
Query: 192 SEIHYDMKGEPSSALAR---VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
+EIH D + + S R VNA R+DL E+WN+VFI + R + +I L +++DTG+G
Sbjct: 191 TEIHIDHRPDLGSVEQRAKLVNAGRSDLTELWNLVFIQYNRHADGSISQLPAHHVDTGMG 250
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTT-SNRTDLDTSYRMLSDYS 307
FERL +LQNK+S YDTDLF P+ + I++ + Y +F N LDTSYR+L+D++
Sbjct: 251 FERLTAVLQNKSSNYDTDLFTPIFDGIQQAAKTPVYSGSFPDGGNAAVLDTSYRILADHA 310
Query: 308 RMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
RM+T LAD M PD KLR V+R AL ISE VF KL+ +L + E LG+ YPE+
Sbjct: 311 RMVTACLADGMLPDQNQKLRRVLRKALNISEHVF--AHDKLLTQLVPIVVETLGEAYPEM 368
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ ++ E ++ NLR+++ K + ++ P L+ ++ME PG V + L Q
Sbjct: 369 AAKQQAVIDLICHEQEVYKNLRESSSKAFAEVLMEFPNLDDIDLMECPGFVPAYRELQMQ 428
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF--EQKLNELKERSKA 485
+ + T I GD + L DTYGL++ +LA + + E + E L +LK +
Sbjct: 429 RCKFSNNT-IPGDFLYKLTDTYGLTEESFLKLAELENMNCDLERYRAEVSLAKLKAKGNQ 487
Query: 486 KAASNVPDIDL-----------MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ + DL M K TD+ +KY Y +D S Y P L T ++G+
Sbjct: 488 RETAGGSLCDLATEQRIAEAQAMLTKRLTPTDNSHKYTYSFDKESDSYQIPPLKTRVLGM 547
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
++ D +R+ S IQ + ++ +N Y +GGQ D G ++
Sbjct: 548 LLNDAEV---------SRTQGS--RIQQPFTDLISIVTAGSNFYYESGGQQSDGGKILVS 596
Query: 595 NTTQEN--GKVEIGELASLEGKIVHFGNVVS---SFKVTPGLTSRVEVDARMRLGCMRAH 649
N Q + +++ + L +VH + S +F++ G ++VDA+ R H
Sbjct: 597 NHQQPDHPHSLDVIGVKHLNDCVVHICKLSSPTDAFQLAIGDEVELQVDAQQRQLNTCHH 656
Query: 650 TTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +HLLNAA+R + TYQ S V SD+C L+ + G+ + V +E IN VI +
Sbjct: 657 TATHLLNAAIRSLFKKVTYQVSSSVSSDQCKLELGLLGKRIQKTDVQLIEDLINRVICSA 716
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVI-LIDISDKE-NVISREPCCGTHVFNTGH 766
V+ + + A+E+ +T++PGE+YP+ + L+++ E + S+E CCGTH NT
Sbjct: 717 APVEVQLLSAAEVLEQNDITMVPGEVYPEQGLRLVNVESPELQLSSKELCCGTHATNTSE 776
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ ++ K N + + G +++ ++ L
Sbjct: 777 LSCFCIVNLKQTNRARFAFTAVAGQAAENVLKTAALL 813
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 80/102 (78%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++AFVN+GM QFK+VFLG AP+ RV NSQKC+RVGGKHNDLS G D YHHT
Sbjct: 40 VPFCDPTVAFVNAGMNQFKSVFLGTAAAPHKRVVNSQKCVRVGGKHNDLSVVGTDGYHHT 99
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+KR+AC MALE L + P ++ RLY T+
Sbjct: 100 FFEMLGNWSFGDYFKREACAMALELL-RGPYNIDPGRLYVTY 140
>gi|198467159|ref|XP_001354280.2| GA18318 [Drosophila pseudoobscura pseudoobscura]
gi|198149531|gb|EAL31333.2| GA18318 [Drosophila pseudoobscura pseudoobscura]
Length = 1013
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 305/818 (37%), Positives = 456/818 (55%), Gaps = 43/818 (5%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L ++ IR +F+D+F H V+SSP+VP+ D ++AFVN+GM QFK+VFLG AP+ R
Sbjct: 12 LTAREIRKTFIDFFTVNHEHKFVRSSPVVPFCDPTVAFVNAGMNQFKSVFLGTAAAPHKR 71
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V NSQKCVRVGGKHNDLS G+D YHHTFFEMLGNWSF DY+K++AC MALE L + P +
Sbjct: 72 VVNSQKCVRVGGKHNDLSVVGQDGYHHTFFEMLGNWSFGDYFKQEACAMALELL-RGPYN 130
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ RLY TYF G G+P D E +IW LG P I G K NFWEMG+TGPCG
Sbjct: 131 IDPGRLYVTYFAGDKLLGIPADMECFEIWRSLGFPASRILPFGCKDNFWEMGATGPCGPC 190
Query: 192 SEIHYDMKGEPSSALAR---VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
+EIH D + E S R VNA R+DL E+WN+VFI + R +I L +++DTG+G
Sbjct: 191 TEIHIDHRPELGSVADRGKLVNAGRSDLTELWNLVFIQYNRNPDGSISQLPAHHVDTGMG 250
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTF-TTSNRTDLDTSYRMLSDYS 307
FERL ILQ+K+S YDTDLF PL + I+++S A YG +F TSN LDTSYR+L+D++
Sbjct: 251 FERLAAILQSKSSNYDTDLFSPLFDGIQQLSKAPVYGGSFPETSNAALLDTSYRILADHA 310
Query: 308 RMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
RM+T LAD M PD KLR V+R AL ISE VF KL+ +L + E LG+ YPE+
Sbjct: 311 RMVTACLADGMLPDQNQKLRRVLRKALNISEHVF--AHEKLLSQLVPIVVETLGEAYPEM 368
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ ++ E ++ NLR+++ K + ++ P L+ ++ME PG V + Q
Sbjct: 369 SAKQEAVIDLINHEHDVYKNLRESSSKAFAEVLTEFPNLDDIDLMECPGFVPAYREFQVQ 428
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF--EQKLNELKERSKA 485
+ P+ T I GD + L DTYGL++ +LA + + + + E L ++K +
Sbjct: 429 RCKFPNNT-IPGDFLYKLTDTYGLTEESFLKLAELENMNCDLDRYRAEVSLAKIKSKESQ 487
Query: 486 KAASNVPDIDLMD---------LKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ + D+ L K TD+ +KY Y +D+ ++ Y P L + +VG+++
Sbjct: 488 REDGGICDVALEQRIAEAQATLTKRLRPTDNSHKYVYSFDSENESYKIPTLRSRVVGMLL 547
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
D A + S + + + ++ +N Y +GGQ D G ++N
Sbjct: 548 ND------------AEVSRTQGSRLQDTSDTLSIVTAASNFYYESGGQQSDAGQILVSNA 595
Query: 597 ---TQENGKVEIGELASLEGKIVHFGNVVS----SFKVTPGLTSRVEVDARMRLGCMRAH 649
Q + + + + L +VH + + F+V G ++VD+ R H
Sbjct: 596 HKPEQPHHLLNVIRVKHLNDCVVHVCRLAAPADDHFEVAIGDEVELQVDSGTRQLNTCHH 655
Query: 650 TTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +HLLNAA+R + TYQ S V S++C L+ + G+ + V +E IN +I +
Sbjct: 656 TATHLLNAAIRSLFNKVTYQVSSSVTSEQCKLELGLLGKRIQKADVQLIEDLINRIICSA 715
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDD---VILIDISDKENVISREPCCGTHVFNTG 765
V + A+++ +T++PGE+YP+ +I + D + + S+E CCGTHV NT
Sbjct: 716 TTVQVELVSAADVLQENDITMVPGEVYPEQGLRLISVQCPDMQ-LSSKELCCGTHVTNTS 774
Query: 766 HIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ ++ K N + + G +++ ++ L
Sbjct: 775 ELSCFCIVNLKQTNRARFAFTAVAGQAAENVLKTAALL 812
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 65/102 (63%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++AFVN+GM QFK+VFLG AP+ RV NSQKC+RVGGKHNDLS G+D YHHT
Sbjct: 40 VPFCDPTVAFVNAGMNQFKSVFLGTAAAPHKRVVNSQKCVRVGGKHNDLSVVGQDGYHHT 99
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+K++AC MALE L + P ++ RLY T+
Sbjct: 100 FFEMLGNWSFGDYFKQEACAMALELL-RGPYNIDPGRLYVTY 140
>gi|195167795|ref|XP_002024718.1| GL22619 [Drosophila persimilis]
gi|194108123|gb|EDW30166.1| GL22619 [Drosophila persimilis]
Length = 1012
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 304/818 (37%), Positives = 456/818 (55%), Gaps = 44/818 (5%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L ++ IR +F+D+F H V+SSP+VP+ D ++AFVN+GM QFK+VFLG AP+ R
Sbjct: 12 LTAREIRKTFIDFFTVNHEHKFVRSSPVVPFCDPTVAFVNAGMNQFKSVFLGTAAAPHKR 71
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V NSQKCVRVGGKHNDLS G+D YHHTFFEMLGNWSF DY+KR A ALE L + P +
Sbjct: 72 VVNSQKCVRVGGKHNDLSVVGQDGYHHTFFEMLGNWSFGDYFKRPAL-WALELL-RGPYN 129
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ RLY TYF G G+P D E +IW LG P I G K NFWEMG+TGPCG
Sbjct: 130 IDPGRLYVTYFAGDKLLGIPADMECFEIWRSLGFPASRILPFGCKDNFWEMGATGPCGPC 189
Query: 192 SEIHYDMKGEPSSALAR---VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
+EIH D + E S R VNA R+DL E+WN+VFI + R +I L +++DTG+G
Sbjct: 190 TEIHIDHRPELGSVADRGKLVNAGRSDLTELWNLVFIQYNRNPDGSISQLPAHHVDTGMG 249
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTF-TTSNRTDLDTSYRMLSDYS 307
FERL ILQ+K+S YDTDLF PL + I+++S A YG +F TSN LDTSYR+L+D++
Sbjct: 250 FERLAAILQSKSSNYDTDLFSPLFDGIQQLSKAPVYGGSFPETSNAALLDTSYRILADHA 309
Query: 308 RMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
RM+T LAD M PD KLR V+R AL ISE VF KL+ +L + E LG+ YPE+
Sbjct: 310 RMVTACLADGMLPDQNQKLRRVLRKALNISEHVF--AHEKLLSQLVPIVVETLGEAYPEM 367
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ ++ E ++ NLR+++ K + ++ P L+ ++ME PG V + Q
Sbjct: 368 SAKQEAVIDLINHEHDVYKNLRESSSKAFAEVLTEFPNLDDIDLMECPGFVPAYREFQVQ 427
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF--EQKLNELKERSKA 485
++ P+ T I GD + L DTYGL++ +LA + + + + E L ++K +
Sbjct: 428 RSKFPNNT-IPGDFLYKLTDTYGLTEESFLKLAELENMNCDLDRYRAEVSLAKIKSKESQ 486
Query: 486 KAASNVPDIDLMD---------LKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ + D+ L K TD+ +KY Y +D+ ++ Y P L + +VG+++
Sbjct: 487 REDGGICDVALEQRISEAQATLTKRLRPTDNSHKYVYSFDSENESYKIPTLRSRVVGMLL 546
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
D + + +R + D++ ++ +N Y +GGQ D G ++N
Sbjct: 547 ND----AEVSRTQGSRLQDTSDTL--------SIVTAASNFYYESGGQQSDAGQILVSNA 594
Query: 597 ---TQENGKVEIGELASLEGKIVHFGNVVSS----FKVTPGLTSRVEVDARMRLGCMRAH 649
Q + + + + L +VH + + F+V G ++VD+ R H
Sbjct: 595 HKPEQPHHLLNVIRVKHLNDCVVHVCRLAAPADDHFEVAIGDEVELQVDSGTRQLNTCHH 654
Query: 650 TTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +HLLNAA+R + TYQ S V S++C L+ + G+ + V +E IN +I +
Sbjct: 655 TATHLLNAAIRSLFNKVTYQVSSSVTSEQCKLELGLLGKRIQKADVQLIEDLINRIICSA 714
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDD---VILIDISDKENVISREPCCGTHVFNTG 765
V + A+++ +T++PGE+YP+ +I + D + + S+E CCGTHV NT
Sbjct: 715 TTVQVELVSAADVLQENDITMVPGEVYPEQGLRLISVQCPDMQ-LSSKELCCGTHVTNTS 773
Query: 766 HIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ ++ K N + + G +++ ++ L
Sbjct: 774 ELSCFCIVNLKQTNRARFAFTAVAGQAAENVLKTAALL 811
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 78/102 (76%), Gaps = 2/102 (1%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++AFVN+GM QFK+VFLG AP+ RV NSQKC+RVGGKHNDLS G+D YHHT
Sbjct: 40 VPFCDPTVAFVNAGMNQFKSVFLGTAAAPHKRVVNSQKCVRVGGKHNDLSVVGQDGYHHT 99
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+KR A ALE L + P ++ RLY T+
Sbjct: 100 FFEMLGNWSFGDYFKRPAL-WALELL-RGPYNIDPGRLYVTY 139
>gi|158286470|ref|XP_308773.4| AGAP006997-PA [Anopheles gambiae str. PEST]
gi|157020483|gb|EAA45453.4| AGAP006997-PA [Anopheles gambiae str. PEST]
Length = 1011
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 304/849 (35%), Positives = 446/849 (52%), Gaps = 68/849 (8%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
S IR F+DYF H L++SS ++P+ D +IAFVN+GM QFK+VFLG P R
Sbjct: 37 SLEIRRQFIDYFTVKHNHRLIRSSSLIPFNDSTIAFVNAGMNQFKSVFLGTAERPCQRAV 96
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
NSQKCVRVGGKHNDLS G DSYHHTFFEMLGNWSF DY+KR+AC MA + L + +
Sbjct: 97 NSQKCVRVGGKHNDLSVVGTDSYHHTFFEMLGNWSFGDYFKREACEMAWDLL-RNVYRID 155
Query: 134 LDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSE 193
DR+Y TYFGG + LP DEE R IW LG+P + + G + NFWEMG++GPCG +E
Sbjct: 156 TDRVYVTYFGGDAKLNLPADEECRQIWRSLGIPPERVLPFGARDNFWEMGNSGPCGPCTE 215
Query: 194 IHYDMKGEPSSALAR---VNADRNDLIEIWNIVFISHKRVSAD-TIVPLSKNYIDTGLGF 249
IH D+ GE + AR VNA DL EIWNIVFI + R D TI L + ++DTG+G
Sbjct: 216 IHLDLSGEYRNTKARQHLVNAGVPDLTEIWNIVFIQYNRSLDDGTIRNLPQRHVDTGMGL 275
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPY-GRTFTTSNRTDLDTSYRMLSDYSR 308
ERLV LQ+K S YDTDLF P+ I+K + +PY G +T + +LDT+YR+++D+SR
Sbjct: 276 ERLVAHLQHKQSNYDTDLFEPIFRRIQKATKKEPYRGSFLSTDSHYELDTAYRIMADHSR 335
Query: 309 MITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
MIT LAD MFP KLR ++R +L ++ F Q L++E + EIL VYPE+
Sbjct: 336 MITACLADGMFPSQNHKLRRIIRKSLALATRTFNHPQ--LLRETVPCVVEILSTVYPEMG 393
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
++ + I+ E ++ LR E L++ P+LE+ +E PGL +K L +
Sbjct: 394 RNLPTVLQIIEHEQHLYSALRTKRSAETSALLQQFPQLEESEALEHPGLADAIKELAQ-- 451
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAA 488
T ++G LYDTYGL + ++ +L +L +E+ + LK+ K + A
Sbjct: 452 ---TKPTHLNGAHIHKLYDTYGLDEELLVKLGEMMHFSLDFRDYERYVRVLKDGHKHELA 508
Query: 489 SNVPD--------IDLMDLKHFPVTDDKYKYDYHYDTNSKRYTF-PCLDTNLVGIVIGDQ 539
+ + + +D T + +Y+Y ++ + Y PC V +++ D+
Sbjct: 509 TKLQTRLSAYENLRESLDSATLKPTRAERRYNYAFNADKGTYEVAPC--RARVSLLLEDE 566
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
+ W ++ D++N Y +GGQ D G T E
Sbjct: 567 A-----------------------RDQW-HIVTDQSNFYCESGGQQSDTG-----RLTVE 597
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTP------GLTSRVEVDARMRLGCMRAHTTSH 653
G G+ + G H G V+ S K P G T ++VDA R HT +H
Sbjct: 598 AGGSAGGQTFEVTGVTDHNGFVMHSIKRQPNVALSVGDTVVLQVDANRRTQLTLHHTATH 657
Query: 654 LLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
LLNA +R+V+ Q+S V L+ ++ GE L+++ +AA+E + +I +
Sbjct: 658 LLNAVVRKVVALPMCQRSSSVSERHFRLELAISGEKLTLEQIAAIETEVRTLINRNEPIG 717
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVI-LIDISDKENVISREPCCGTHVFNTGHIESCT 771
A++L T +T++PGE YPD + ++ I D +SRE CCGTH TG ++
Sbjct: 718 VTVCNAADLDLAT-VTIVPGETYPDRGLRVVSIGD----VSRELCCGTHATRTGELQDVA 772
Query: 772 VIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIPYGDDSIAFVNSG 831
+ +G + + G +++ G + SQ+ + I + +
Sbjct: 773 ITNVTQSKNGCFTFHAVAGPAARKVHYLGAQIQN--DVSQLQQDAEQNEKQEDITIIETR 830
Query: 832 MCQFKNVFL 840
M + KNV L
Sbjct: 831 MQRLKNVLL 839
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP+ D +IAFVN+GM QFK+VFLG P R NSQKC+RVGGKHNDLS G DSYHHT
Sbjct: 63 IPFNDSTIAFVNAGMNQFKSVFLGTAERPCQRAVNSQKCVRVGGKHNDLSVVGTDSYHHT 122
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+KR+AC MA + L + + DR+Y T+
Sbjct: 123 FFEMLGNWSFGDYFKREACEMAWDLL-RNVYRIDTDRVYVTY 163
>gi|157119081|ref|XP_001659327.1| alanyl-tRNA synthetase [Aedes aegypti]
gi|108875478|gb|EAT39703.1| AAEL008509-PA [Aedes aegypti]
Length = 1012
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 312/851 (36%), Positives = 454/851 (53%), Gaps = 63/851 (7%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP 70
R SK IR F+DYF H LV+SS +VP+ D +IAFVN+GM QFKNVFLG AP P
Sbjct: 32 RWSSKQIRQQFVDYFVQENEHRLVRSSSVVPFSDPTIAFVNAGMNQFKNVFLGTAEAPCP 91
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R NSQKC+RVGGKHND+S G D YHHTFFEMLG+WSF DY+KR+AC+MA LT+
Sbjct: 92 RAVNSQKCIRVGGKHNDVSVVGSDGYHHTFFEMLGSWSFGDYFKREACQMAWRLLTE-VY 150
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+ RLY +YFGG + GLP D E RD+W LG+P + I G + NFWEMG++GPCG
Sbjct: 151 GIDPRRLYVSYFGGDEAMGLPADLECRDVWAGLGIPPERIIPFGARDNFWEMGNSGPCGP 210
Query: 191 SSEIHYDMKGEPSSALAR---VNADRNDLIEIWNIVFISHKRVSAD-TIVPLSKNYIDTG 246
+EIH D R VNA DL E+WNIVFI + R D I L + ++DTG
Sbjct: 211 CTEIHIDHSDRFLDTEGRKHLVNAGVPDLTEVWNIVFIQYNRNLEDGRINDLPQRHVDTG 270
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTF-TTSNRTDLDTSYRMLSD 305
LG ERLV LQNK S YDTDLF+P+ + I+KV+ Y F +T R LDT+YR+++D
Sbjct: 271 LGLERLVAHLQNKNSNYDTDLFVPIFDRIQKVTKKDGYQGIFDSTDPRCPLDTAYRIVAD 330
Query: 306 YSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
++RMIT L+D MFP KLR ++R +L +SE VF L++EL + ILGD YP
Sbjct: 331 HTRMITACLSDGMFPSQNHKLRRILRRSLSLSERVF--SSPSLLQELIPVVVGILGDTYP 388
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E+ + + Q I+ E + + LR + + L+K ++ + + PGL +K +
Sbjct: 389 EMHKKLQQTQQIILHEEQSYQQLRSNLSSDSRALLKEYSYFDEAEVTDHPGLPYALKEI- 447
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
K+L + + G+M +YDTYGL ++++ ++ + L L + + +KE +K
Sbjct: 448 KRLKAKQGLRLLDGEMIHKMYDTYGLDEDLLVKIGEFEHLELDIKGYNSYSKLIKEGAKL 507
Query: 486 KAASNVPD--------IDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
+ A+ + + ++ K T ++YKY+Y Y+ + + Y P L T + IV
Sbjct: 508 ELAARLQESLNTSQGLSQGLNQKQQCPTRNEYKYNYTYNKDKRLYEIPKLKTKITSIVTA 567
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTNT 596
D E NA +I +K+N Y +GGQ D G +A T+
Sbjct: 568 DG-----------------------EENALCHVITEKSNFYFESGGQQSDRGSLALATDP 604
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
T +GE +G ++H + ++ K++ G + VD +R + HT +HLLN
Sbjct: 605 TTPFRVKSVGE---HQGFVIHSVDRRAAEKLSVGDEVILTVDPIIRSSNIVHHTATHLLN 661
Query: 657 AALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
AA R VL Q+S V L+ +V G + D V A+E+ I I V R
Sbjct: 662 AAARSVLAVPMCQRSSYVGDKGLKLELAVCGAKIGPDEVDAMEQQIRQCIRQNEPVRVRV 721
Query: 716 MRASELPFLTHLTVIPGEIYPDDVI-LIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
ASE+ L +T+IPGE+YP+ + L++I S E CCGTH +TG ++ +
Sbjct: 722 CNASEVD-LDKVTMIPGEVYPEKGLRLVEIGQS---TSTEFCCGTHAQSTGQLQDFCITN 777
Query: 775 YKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIPYGDDS-----IAFVN 829
G + + G ++ A + G + +VG + + D + +
Sbjct: 778 VSQSKSGCYTFFAIAGQAAIKAHQLGAQIQN--------DVGQLKHDMDQQLSRDMTSLE 829
Query: 830 SGMCQFKNVFL 840
+ M + KNV L
Sbjct: 830 ARMQRLKNVLL 840
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D +IAFVN+GM QFKNVFLG AP PR NSQKCIRVGGKHND+S G D YHHT
Sbjct: 61 VPFSDPTIAFVNAGMNQFKNVFLGTAEAPCPRAVNSQKCIRVGGKHNDVSVVGSDGYHHT 120
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLG+WSF DY+KR+AC+MA LT+ + RLY ++
Sbjct: 121 FFEMLGSWSFGDYFKREACQMAWRLLTE-VYGIDPRRLYVSY 161
>gi|328701423|ref|XP_003241593.1| PREDICTED: alanyl-tRNA synthetase, mitochondrial-like
[Acyrthosiphon pisum]
Length = 974
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 318/823 (38%), Positives = 449/823 (54%), Gaps = 67/823 (8%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L S IR F+DYF H +KSSP+VPY D +IAFVN+GMCQFK+V LG
Sbjct: 21 LSSNEIRKRFIDYFVKENDHKYIKSSPVVPYNDPTIAFVNAGMCQFKSVLLGQRTLAANC 80
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VANSQKC+RVGGKHNDL G D YHHTFFEMLGNWSF Y K +AC +A LT PP +
Sbjct: 81 VANSQKCIRVGGKHNDLDIVGSDGYHHTFFEMLGNWSFGHYGKAEACHLAWNLLTLPPFN 140
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P ++LY T F G + D ET IW +GV DHI G+ NFWEMG TGPCG
Sbjct: 141 IPTEQLYCTVFNGDRTLDVESDNETLQIWKNIGVNDDHIVMNGVNDNFWEMGETGPCGPC 200
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
+EIH D PS +LIE+WNIVFI + R +T+ L +IDTG+G ER
Sbjct: 201 TEIHIDY--PPSGG--------KNLIELWNIVFIQYSR-EKNTMRKLPNYFIDTGMGLER 249
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
L +LQ+KTSTYDTDLF + I Y + + T LDT YR+L+D+ RMIT
Sbjct: 250 LTMVLQDKTSTYDTDLFSSIFNIIFNACRISKYTGLY---DGTSLDTYYRVLADHGRMIT 306
Query: 312 VALADNMFPDATAKLRNVVRDALLISEDVFKVKQG-KLVKELSYNIAEILGDVYPEIQDS 370
VAL+DNM P KLR ++R + +++E FK++ G L+ +++ ++ LG+VYPE+ +
Sbjct: 307 VALSDNMLPSQNHKLRRLIRKSFILAETNFKIQPGYTLICDIANEVSNSLGNVYPELIKN 366
Query: 371 INKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE-PGLVLGVKYLTKQLA 429
K++ ++ E IF+ LR + K+WK +V+ P L+ F+ EE G V YL K
Sbjct: 367 NEKVKHLIKHEYAIFNKLRMSVSKDWKIMVEECPMLKSFDPYEECTGFVPACNYLIKH-- 424
Query: 430 RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAAS 489
+S AFTLYD +GL K I LA + +KL +L+ ++ K
Sbjct: 425 -----KNMSNIPAFTLYDAFGLEKKTIGRLAEVMGKPVNWNELYEKLKKLQTKT-IKHTE 478
Query: 490 NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIR 549
+I + + P TDD +KY+ N++ Y P L L+ IV
Sbjct: 479 RKSNIYMTG--NIPKTDDSFKYEV-IRHNNESYLSPVLIAKLLAIV-------------- 521
Query: 550 HARSGASIDSIQLEHNA-WVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV-EIGE 607
+G + ++ V L+ DKT+ Y AGGQ +DIG+ NGKV ++
Sbjct: 522 -DINGNIVTEPDIKQQGDLVSLVLDKTSFYCKAGGQQNDIGIV-----KTNNGKVFDVIG 575
Query: 608 LASLE--GKIVHFGNVVSSFKVTPGLTSR----VEVDARMRLGCMRAHTTSHLLNAALRR 661
+ +E G ++H N + P L S V+VD+ RLG MRAH++ H+LN+ L
Sbjct: 576 VDKIEENGVVLHHINS----RDWPILLSENELHVQVDSNNRLGLMRAHSSVHILNSVLNL 631
Query: 662 VLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L T Q S V D + F+++G+T S +E+ + VI + V V R + +++L
Sbjct: 632 YLVVTTQLSSCVKKDFMSFTFALFGQTFSPKDALVIEEKVKSVIQSAVSVKRTTVTSNDL 691
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDK--ENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
+ ++T++PGE+YPD+V LID+ ++ ISRE CCGTHV NT + ++ YK N
Sbjct: 692 NQI-NVTLLPGEVYPDEVHLIDMYSNVDDSYISREACCGTHVQNTLDVIDFCIVQYKC-N 749
Query: 780 HGVRSIKCLTGDSSKAAVENGKHLSTAASFSQIL----NVGNI 818
+I +TG A G+ L ++F + L N+ NI
Sbjct: 750 INECTIMAVTGPLCTNARVFGQQLLGKSNFVEDLVNSTNLNNI 792
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 73/101 (72%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+PY D +IAFVN+GMCQFK+V LG VANSQKCIRVGGKHNDL G D YHHT
Sbjct: 49 VPYNDPTIAFVNAGMCQFKSVLLGQRTLAANCVANSQKCIRVGGKHNDLDIVGSDGYHHT 108
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF Y K +AC +A LT PP ++P ++LY T
Sbjct: 109 FFEMLGNWSFGHYGKAEACHLAWNLLTLPPFNIPTEQLYCT 149
>gi|170047897|ref|XP_001851441.1| alanyl-tRNA synthetase [Culex quinquefasciatus]
gi|167870139|gb|EDS33522.1| alanyl-tRNA synthetase [Culex quinquefasciatus]
Length = 1007
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 296/798 (37%), Positives = 428/798 (53%), Gaps = 52/798 (6%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR FLD+F GH +V+SSP+VP+ D +IAFVN+GM QFK+VFLG AP R
Sbjct: 35 VSSAEIRRRFLDFFVRDHGHRVVRSSPVVPFSDPTIAFVNAGMNQFKSVFLGEREAPCRR 94
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKCVRVGGKHND+ G D YHHTFFEMLGNWSF DY+KR+AC MAL L K
Sbjct: 95 AVNSQKCVRVGGKHNDIGVVGTDGYHHTFFEMLGNWSFGDYFKREACEMALSLL-KDVYR 153
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ R+Y TYFGG GLP D E R+IW LG+P + I G + NFWEMGS+GPCG
Sbjct: 154 IDARRMYVTYFGGDAAMGLPADLECREIWASLGIPEERILPFGARDNFWEMGSSGPCGPC 213
Query: 192 SEIHYDMKGEPSSALAR---VNADRNDLIEIWNIVFISHKRVSAD-TIVPLSKNYIDTGL 247
+EIH D + + R VNA DL E+WN+VFI + R D I L + ++DTGL
Sbjct: 214 TEIHIDHSDQFGNVAERSRYVNAGLPDLTEVWNVVFIQYNRGLGDGRITDLPQRHVDTGL 273
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRT-DLDTSYRMLSDY 306
G ERLV LQ K S YDTDLF+PL E +E++S Y F +R +LDT+YR+++D+
Sbjct: 274 GLERLVAHLQQKNSNYDTDLFVPLFERMEQISRKDKYQGVFDARHRNYELDTAYRIVADH 333
Query: 307 SRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
+RMIT L+D MFP + KLR ++R L +SE F L++EL + EILG+ YPE
Sbjct: 334 TRMITACLSDGMFPSQSHKLRRILRRTLSLSERTFGSPH--LLRELVPVVVEILGETYPE 391
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ + + I+ E + LR A E + L+K P +++ +++ PGL + K
Sbjct: 392 MDKKLTESLAIIRHEEECYRQLRSALTSESRDLLKRNPWIDESELIDHPGL----PHALK 447
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
++ + ++ G +YDTYGL +++++++A ++L L +E +LK+ +K +
Sbjct: 448 EIRKLNGANKLDGTFIHKMYDTYGLDEDLLEKIANFERLELDLAGYETFSKQLKQGAKLE 507
Query: 487 AASNVPDI-----DLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
A+ + +L+ T + YKY+Y Y+ + + Y P L T + IV
Sbjct: 508 LANQLQQSLGRSRELLSSTQAGPTRNVYKYNYVYNGDKQTYDVPQLKTKITSIV------ 561
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
+ A SG + I + +N Y AGGQ D G +L
Sbjct: 562 -------KSATSGCHV-------------ITEASNFYFEAGGQQSDTGRIWL--AADPAV 599
Query: 602 KVEIGELASLEGKIVH-FGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
+ E+ + +G ++H + ++ ++ G + VDA R + HT +HLLNAA R
Sbjct: 600 QFEVKSVGECQGYVIHSVEDGAATGLISVGDEVVLAVDAARRTSNIIHHTATHLLNAATR 659
Query: 661 RVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
+VL Q+S V L+ +V G + D V A+E + I V R AS
Sbjct: 660 KVLGVPMCQRSSVVGDKGLRLELAVCGAKVGPDEVDAIETIVRQSIRQNEPVRIRVCNAS 719
Query: 720 ELPFLTHLTVIPGEIYPDDVI-LIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
++ L +T IPGEIYP+ + L+DI S E CCGTH T ++ +
Sbjct: 720 DVD-LNKVTTIPGEIYPERGLRLVDIGAS---TSTEFCCGTHAQQTAELQDFCITNLAQS 775
Query: 779 NHGVRSIKCLTGDSSKAA 796
G + + G+ + A
Sbjct: 776 KPGCFTFHAIAGEPAVKA 793
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 74/102 (72%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D +IAFVN+GM QFK+VFLG AP R NSQKC+RVGGKHND+ G D YHHT
Sbjct: 63 VPFSDPTIAFVNAGMNQFKSVFLGEREAPCRRAVNSQKCVRVGGKHNDIGVVGTDGYHHT 122
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+KR+AC MAL L K + R+Y T+
Sbjct: 123 FFEMLGNWSFGDYFKREACEMALSLL-KDVYRIDARRMYVTY 163
>gi|360043626|emb|CCD81172.1| putative alanyl-tRNA synthetase [Schistosoma mansoni]
Length = 980
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 288/832 (34%), Positives = 440/832 (52%), Gaps = 79/832 (9%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP---- 66
++ +K +R F ++F ++GH V SS +P+ D ++ F N+GM Q+K +F G
Sbjct: 4 KITAKELRKQFFEFF-ESKGHVYVHSSSTIPHNDPTLLFANAGMNQYKPIFQGTVDPNSE 62
Query: 67 -APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
R NSQKC+R GGKHNDL GRD YHHTFFEMLGNWSF DY+K++AC A E L
Sbjct: 63 LGRLKRSYNSQKCIRAGGKHNDLDDVGRDVYHHTFFEMLGNWSFGDYFKKEACEWAWELL 122
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
T+ +P +RLY TYFGG GLP DEE RDIW+ +G+P+DH+ GMK NFWEMG T
Sbjct: 123 TEV-WKIPSERLYVTYFGGDISNGLPADEEARDIWISIGLPKDHVLPFGMKENFWEMGET 181
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG SEIHYD G+ +A VN D D++EIWN+VFI R ++ PL +IDT
Sbjct: 182 GPCGPCSEIHYDRMGDRDAA-HLVNQDDPDVLEIWNLVFIQFNREEGGSLKPLPAKHIDT 240
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFER++++LQNK S YDTDLF+PL +TIE + +PY + +D +YR+L+D
Sbjct: 241 GMGFERVLSVLQNKRSNYDTDLFVPLFKTIEAGTNTRPYTGKVGVEDTDKIDMAYRVLAD 300
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
++R++T+AL D T + +R ++R A+ + +V K G L + + E LGD
Sbjct: 301 HARVLTIALGDGGRAQNTGRGYVIRRILRRAVRFAVEVLNAKPGFLATLVDI-VIETLGD 359
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PEI + I+ ++ EE EQF + + G +
Sbjct: 360 AFPEITRDPDTIKELINEEE------------------------EQFLVTLKRGRRFFDR 395
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+ A + T +SG++A+ LY+TYG ++ Q LA L + +E+ E + R
Sbjct: 396 VIKDLKASGSNNTTLSGEVAWGLYETYGFPLDLTQILAEEHHLKIDLNGYEKAKEEAQIR 455
Query: 483 SKAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
S+++ + IDL + K+ VTDD K+ Y D N Y FP + ++ I+
Sbjct: 456 SQSRKCTGGSIIDLTVHALAELKSKNISVTDDSEKFVYTSDLNGN-YVFPDSEATVLAIL 514
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
++ ++S+ L + G+I +KT YA +GGQ+ D G ++T+
Sbjct: 515 YENKF----------------VESVDLS-SQMCGIILNKTIFYAESGGQLYDHG--FITS 555
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T E + + ++ G I+H GN+ K+ G + +D R MR HT +H+L
Sbjct: 556 LTDEVTEFSVSDVQCRGGYILHIGNLHG--KLIVGNRVLLSLDTVRRTALMRNHTGTHVL 613
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR ++ + QK V D DF+ ++ D +A E+ + +I+ ++ V +
Sbjct: 614 NFALRELVDESEQKGSLVAPDRLRFDFTAK-RGMTRDELAKAEEICDTMISKRLNVYSSN 672
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKE----NVISREPCCGTHVFN 763
+ S + + + GE YPD V ++ I +D E S E C GTHV N
Sbjct: 673 VSLSYAKTIQGVRAVFGEAYPDPVRVVSIGVPVTSLVADPETGYGKTTSVEFCGGTHVLN 732
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS-FSQILN 814
T HI ++ ++ + GVR I LTG ++ A + L + F +++N
Sbjct: 733 TKHIGVLVIVSEEAISKGVRRIIALTGHEAERAQKEALRLDNEVNEFIKLVN 784
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM Q+K +F G R NSQKCIR GGKHNDL GRD
Sbjct: 32 IPHNDPTLLFANAGMNQYKPIFQGTVDPNSELGRLKRSYNSQKCIRAGGKHNDLDDVGRD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++AC A E LT+ +P +RLY T+
Sbjct: 92 VYHHTFFEMLGNWSFGDYFKKEACEWAWELLTE-VWKIPSERLYVTY 137
>gi|256077790|ref|XP_002575183.1| alanyl-tRNA synthetase [Schistosoma mansoni]
Length = 980
Score = 474 bits (1220), Expect = e-130, Method: Compositional matrix adjust.
Identities = 288/832 (34%), Positives = 440/832 (52%), Gaps = 79/832 (9%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP---- 66
++ +K +R F ++F ++GH V SS +P+ D ++ F N+GM Q+K +F G
Sbjct: 4 KITAKELRKQFFEFF-ESKGHVYVHSSSTIPHNDPTLLFANAGMNQYKPIFQGTVDPNSE 62
Query: 67 -APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
R NSQKC+R GGKHNDL GRD YHHTFFEMLGNWSF DY+K++AC A E L
Sbjct: 63 LGRLKRSYNSQKCIRAGGKHNDLDDVGRDVYHHTFFEMLGNWSFGDYFKKEACEWAWELL 122
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
T+ +P +RLY TYFGG GLP DEE RDIW+ +G+P+DH+ GMK NFWEMG T
Sbjct: 123 TEV-WKIPSERLYVTYFGGDISNGLPADEEARDIWISIGLPKDHVLPFGMKENFWEMGET 181
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG SEIHYD G+ +A VN D D++EIWN+VFI R ++ PL +IDT
Sbjct: 182 GPCGPCSEIHYDRVGDRDAA-HLVNQDDPDVLEIWNLVFIQFNREEGGSLKPLPAKHIDT 240
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFER++++LQNK S YDTDLF+PL +TIE + +PY + +D +YR+L+D
Sbjct: 241 GMGFERVLSVLQNKRSNYDTDLFVPLFKTIEAGTNTRPYTGKVGVEDTDKIDMAYRVLAD 300
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
++R++T+AL D T + +R ++R A+ + +V K G L + + E LGD
Sbjct: 301 HARVLTIALGDGGRAQNTGRGYVIRRILRRAVRFAVEVLNAKPGFLATLVDI-VIETLGD 359
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PEI + I+ ++ EE EQF + + G +
Sbjct: 360 TFPEITRDPDTIKELINEEE------------------------EQFLVTLKRGRRFFDR 395
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+ A + T +SG++A+ LY+TYG ++ Q LA L + +E+ E + R
Sbjct: 396 VIKDLKASGSNNTTLSGEVAWGLYETYGFPLDLTQILAEEHHLKIDLNGYEKAKEEAQIR 455
Query: 483 SKAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
S+++ + IDL + K+ VTDD K+ Y D N Y FP + ++ I+
Sbjct: 456 SQSRKCTGGSIIDLTVHALAELKSKNISVTDDSEKFVYTSDLNGN-YVFPDSEATVLAIL 514
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
++ ++S+ L + G+I +KT YA +GGQ+ D G ++T+
Sbjct: 515 YENKF----------------VESVDLS-SQMCGIILNKTIFYAESGGQLYDHG--FITS 555
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T E + + ++ G I+H GN+ K+ G + +D R MR HT +H+L
Sbjct: 556 LTDEVTEFSVSDVQCRGGYILHIGNLHG--KLIVGNRVLLSLDTVRRTALMRNHTGTHVL 613
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR ++ + QK V D DF+ ++ D +A E+ + +I+ ++ V +
Sbjct: 614 NFALRELVDESEQKGSLVAPDRLRFDFTAK-RGMTRDELAKAEEICDTMISKRLNVYSSN 672
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKE----NVISREPCCGTHVFN 763
+ S + + + GE YPD V ++ I +D E S E C GTHV N
Sbjct: 673 VSLSYAKTIQGVRAVFGEAYPDPVRVVSIGVPVTSLVADPETGYGKTTSVEFCGGTHVLN 732
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS-FSQILN 814
T HI ++ ++ + GVR I LTG ++ A + L + F +++N
Sbjct: 733 TKHIGVLVIVSEEAISKGVRRIIALTGHEAERAQKEALRLDNEVNEFIKLVN 784
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM Q+K +F G R NSQKCIR GGKHNDL GRD
Sbjct: 32 IPHNDPTLLFANAGMNQYKPIFQGTVDPNSELGRLKRSYNSQKCIRAGGKHNDLDDVGRD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++AC A E LT+ +P +RLY T+
Sbjct: 92 VYHHTFFEMLGNWSFGDYFKKEACEWAWELLTE-VWKIPSERLYVTY 137
>gi|348545288|ref|XP_003460112.1| PREDICTED: alanyl-tRNA synthetase, mitochondrial-like [Oreochromis
niloticus]
Length = 1039
Score = 474 bits (1220), Expect = e-130, Method: Compositional matrix adjust.
Identities = 301/847 (35%), Positives = 437/847 (51%), Gaps = 99/847 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L + +RS+F+++F + GH V SSP+ P GD S+ FVN+GM QFK +FLG
Sbjct: 87 LPAARVRSAFVEFFRDKHGHLPVPSSPVRPRGDPSLLFVNAGMNQFKPIFLGTADPRSEM 146
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A Y RV NSQKCVR GGKHNDL GRD YHH FFEMLGNWSF DY+K +ACRMA LT
Sbjct: 147 ASYRRVVNSQKCVRAGGKHNDLDDVGRDGYHHIFFEMLGNWSFGDYFKEEACRMAWSLLT 206
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P DRLY +YFGG GLP DE+TR+IWLE+GVP + G+K NFWEMG TG
Sbjct: 207 EH-YGIPADRLYVSYFGGDAAAGLPADEDTRNIWLEIGVPTHRLLPFGLKDNFWEMGDTG 265
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG +EIHYD G A A VNAD +++EIWN+VF+ + R ++ L + +DTG
Sbjct: 266 PCGPCTEIHYDHVGGREVA-ALVNADSPEVVEIWNLVFMQYNRELDHSLRLLPQVSVDTG 324
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQ KTS YDTDLF PLL I + SG +PY + +D +YR+++D+
Sbjct: 325 MGLERLVSVLQGKTSNYDTDLFTPLLHAIHQRSGVEPYRGRMGAVDVGQVDLAYRVVADH 384
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R ++V +AD + P + LR ++R A+ +V + QG L L +A++LG++
Sbjct: 385 IRTLSVCIADGVCPGMSGAELVLRRILRRAVRFCVEVLRAPQGTLAS-LVPTVADLLGNI 443
Query: 364 YPEIQDSINKIQLILGE-ESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ ++I I+ E E+ +LR+ G +
Sbjct: 444 YPELHQETDRIVDIINENEAHFLSSLRQ-----------------------------GSR 474
Query: 423 YLTKQLAR-DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE--- 478
+ + L+R D +A++L+ G +++ + + + + + ++ + E
Sbjct: 475 LIERTLSRKDYKRGVFPASVAWSLHRDLGFPLDLVDLILEERGVRVDRQELDRLIAENQK 534
Query: 479 --LKERSKAKAASNVPDIDLMDLKHF--PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
L+ ++ +A + + L +L+ P TDD KYDYH RY FP ++ +
Sbjct: 535 VALELQAGDRAQVTLDVLSLTELQRLGVPHTDDSLKYDYHLAEG--RYVFPPCHATVLAL 592
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
G + ++ +I D+T YA GGQ D G Y T
Sbjct: 593 YDGQGLVS------------------EVSEGQRCSVILDRTCFYAEQGGQSHDQG--YFT 632
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
++ + + G +VH+ + K L ++ +D RL CM HT +H+
Sbjct: 633 LDELQDVLFPVEAVVRAGGYVVHWVTAADNLKTGDQL--QLHLDQVHRLSCMVKHTATHI 690
Query: 655 LNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVD 712
LN ALR+VL + Q+ V +D DFSV G +LSV + VE+ IND+I ANQ+
Sbjct: 691 LNFALRKVLGASVQQRGSHVSADRLRFDFSVKG-SLSVSQLQQVERCINDIISANQI--- 746
Query: 713 RRHMRASELPFLTHLTVIPG-----EIYPDDVILIDI---------SDKENVISREPCCG 758
+ + ELP L I G E+YPD V ++ + E S E CCG
Sbjct: 747 ---VHSQELP-LQRARGISGLRTVDEVYPDPVRVVSVEMPVTELLDERSERQTSVELCCG 802
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST-AASFSQILNVGN 817
TH+ TG IE ++ K G+ I +TG + A E G LS S S L G+
Sbjct: 803 THLLQTGAIEDLVIVSEKQLVKGISRIVAVTGQEAARAREAGHVLSQDVDSLSARLG-GS 861
Query: 818 IPYGDDS 824
P G D+
Sbjct: 862 APSGLDT 868
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 73/106 (68%), Gaps = 6/106 (5%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A Y RV NSQKC+R GGKHNDL GRD
Sbjct: 116 PRGDPSLLFVNAGMNQFKPIFLGTADPRSEMASYRRVVNSQKCVRAGGKHNDLDDVGRDG 175
Query: 874 YHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHH FFEMLGNWSF DY+K +ACRMA LT+ +P DRLY ++
Sbjct: 176 YHHIFFEMLGNWSFGDYFKEEACRMAWSLLTE-HYGIPADRLYVSY 220
>gi|312379940|gb|EFR26076.1| hypothetical protein AND_08072 [Anopheles darlingi]
Length = 975
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 288/822 (35%), Positives = 422/822 (51%), Gaps = 84/822 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L + IR FLD+F + H V SS ++P D ++ F N+GM QFK +FLG
Sbjct: 11 LTASQIRKIFLDFFAEKK-HLYVHSSSVIPLDDPTLLFANAGMNQFKPIFLGTVDPSSEM 69
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A + R AN+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+KR+ C A E LT
Sbjct: 70 ARWVRTANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKREICTWAWELLT 129
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ + LP DRLY TYFGG + GL D E R IW+ELG+P H+ MK NFWEMG TG
Sbjct: 130 ER-LRLPKDRLYVTYFGGHPESGLEPDLECRSIWIELGIPEAHVLPGSMKDNFWEMGETG 188
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+H+D G S VN D D++EIWN+VFI + R ++ L K +ID G
Sbjct: 189 PCGPCSELHFDRIGGGRSVPELVNQDDPDVLEIWNLVFIQYNREQDGSLKLLPKKHIDCG 248
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++Q+K S YDTD+F+PL + I +GA PYG + +D +YR+L+D+
Sbjct: 249 MGFERLVSVIQDKRSNYDTDVFVPLFDAIRAGTGAPPYGGRVGAEDTDGVDMAYRVLADH 308
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD FPD T + LR ++R A+ + + K G L + E+LGD
Sbjct: 309 ARTITIALADGGFPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFASLVDTVVELLGDT 367
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I+ ++GEE + F +KT L G
Sbjct: 368 FPEVRKDPQHIKNVIGEEEQQF--------------LKT--------------LTRGRNL 399
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + +A+ I GD+A+ LYDTYG ++ Q +A K++++ E +E+ +E S
Sbjct: 400 LNRTIAKLGDSKVIPGDVAWRLYDTYGFPVDLTQLMAEEKEMSIDMEGYERAKHESYLIS 459
Query: 484 KAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTN--SKRYTFPCLDTNLVGI 534
+ K S IDL + K TDD KY Y ++ +Y F +V +
Sbjct: 460 QGKEKSKTATIDLDVHAISELQAKQLAPTDDSTKYRYRAESTDPQAQYVFEGCRGRIVAL 519
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
G GA ++ + G+I DKTN YA +GGQI D G YL
Sbjct: 520 RFG----------------GAFVEEVTAGQEC--GVILDKTNFYAESGGQIYDQG--YLV 559
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E+ + + + + G ++H G V + +V G +D R M+ H+ +H
Sbjct: 560 KVGDESSEFNVSLVYNRGGYVLHIGVVEGTLRV--GDEVDCHLDTVRRQLTMKNHSATHA 617
Query: 655 LNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN +L +VL T Q+ V ++ DF+ ++++ V E+ +V+ VQV
Sbjct: 618 LNHSLLKVLGQDTDQRGSLVVPEKLRFDFTNKA-AMTIEQVGEAERLTREVVRKNVQVFA 676
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
+ + + L + E+YPD V +I SD + S E C GTH+
Sbjct: 677 KETNLAVAKSIRGLRSVFDEVYPDPVRVISFGVPVEQLAADPTSDAGVLNSVEFCGGTHL 736
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+GH+ + ++ G+R I LTG + A++ + L
Sbjct: 737 HQSGHMVDFVITSEEAIAKGIRRIVALTGPEALKALQKTESL 778
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG A + R AN+QKCIR GGKHNDL G+D
Sbjct: 38 IPLDDPTLLFANAGMNQFKPIFLGTVDPSSEMARWVRTANTQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+KR+ C A E LT+ + LP DRLY T+
Sbjct: 98 VYHHTFFEMLGNWSFGDYFKREICTWAWELLTE-RLRLPKDRLYVTY 143
>gi|224047577|ref|XP_002187191.1| PREDICTED: alanine--tRNA ligase, mitochondrial [Taeniopygia
guttata]
Length = 986
Score = 471 bits (1211), Expect = e-129, Method: Compositional matrix adjust.
Identities = 294/827 (35%), Positives = 426/827 (51%), Gaps = 97/827 (11%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
+ IR++FL +F GH + S+P+ P GD + FVN+GM QFK +FLG A
Sbjct: 33 AGQIRAAFLRFFEERHGHRRLPSAPVRPRGDPRLLFVNAGMNQFKPIFLGTVHPRSELAQ 92
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
Y RV NSQKCVR GGKHNDL GRD+YHHTFFEMLGNWSF DY+K +AC MA E LT+
Sbjct: 93 YRRVVNSQKCVRAGGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYFKEEACSMAWELLTEV 152
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
+P DRLY TYFGG GL DEE RD+WL LGVP H+ +K NFWEMG TGPC
Sbjct: 153 -YEIPRDRLYVTYFGGDPSLGLSADEECRDVWLHLGVPASHVLPFPLKDNFWEMGDTGPC 211
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G +EIHYD G +A A VN D++EIWN+VF+ + R ++PL ++++DTG+G
Sbjct: 212 GPCTEIHYDHVGGGRNAAALVNQGSPDVVEIWNLVFMQYSREVEGNLLPLPQHHVDTGMG 271
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
ERLVT+LQNK S+YDTDLF P+L+ I KV A Y ++ ++ +YR+++D+ R
Sbjct: 272 LERLVTVLQNKRSSYDTDLFTPILDAIHKVCRAPRYQGLVGNADVGRVNMAYRVVADHVR 331
Query: 309 MITVALADNMFP---DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
+ V + D ++P A LR ++R A+ +V + G L+ L + E+LGD YP
Sbjct: 332 TLCVCITDGIYPGFSGAELVLRRILRRAVRFCSEVLQAPPG-LLASLVPTVVEVLGDAYP 390
Query: 366 EIQDSINKIQLILGE-ESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
E+ + N+I+ IL E E+ +L + G + +
Sbjct: 391 ELTRNANQIKDILNENEAAFLSSLER-----------------------------GRRII 421
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ-KLNELKERS 483
+ + + T ++A++LY + G ++I + K ++L AF + L + K ++
Sbjct: 422 ERTVQQMEPSTNFPAEVAWSLYGSLGFPLDLIDLMLEEKGISLDSAAFNKLALEDAKRKA 481
Query: 484 KAKAAS---------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
A +V + + P TDD KY Y + + PC T L +
Sbjct: 482 GGPQAGQTGTANTRLDVHSLAWLQGSSVPTTDDSPKYTYTLGLHGQYEFSPCQATVL--M 539
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+ DQ H GA G+I D+TN YA GGQ D G Y+
Sbjct: 540 LYKDQSL--------HKEVGA---------GQRCGVILDRTNFYAEQGGQDSDQG--YMI 580
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
Q++ + + G ++H V + + G ++ VD RL CMR HT +HL
Sbjct: 581 RLGQQDVLFPVESVHLCGGYVIHEVTAVETLRA--GDQVQLFVDEAQRLACMRNHTATHL 638
Query: 655 LNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
L+ ALRRVL T Q+ V + + DF G ++V+ + VE+ + D+I V
Sbjct: 639 LSFALRRVLGDSTEQRGSHVTAQQLRFDFDTKGH-VTVEQLQQVEQVVRDLIQKNEVV-- 695
Query: 714 RHMRASELPFLTHLTVIPG-----EIYPDDVILIDIS-DKENVI----------SREPCC 757
HM +E+P LT + G E YPD V ++ + ENV+ S E CC
Sbjct: 696 -HM--AEVP-LTLARRVQGLRAVDEEYPDPVRIVSLGVPVENVLTCDSKAAMQTSVELCC 751
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
GTH+ TG +E +I + G+ + +TG +K A E G+ L+
Sbjct: 752 GTHLLQTGSVEDLAIISERQLVKGISRVIAVTGGRAKEAREVGQCLA 798
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 74/106 (69%), Gaps = 6/106 (5%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD + FVN+GM QFK +FLG A Y RV NSQKC+R GGKHNDL GRD+
Sbjct: 60 PRGDPRLLFVNAGMNQFKPIFLGTVHPRSELAQYRRVVNSQKCVRAGGKHNDLEDVGRDT 119
Query: 874 YHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K +AC MA E LT+ +P DRLY T+
Sbjct: 120 YHHTFFEMLGNWSFGDYFKEEACSMAWELLTE-VYEIPRDRLYVTY 164
>gi|307210107|gb|EFN86804.1| Alanyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
Length = 972
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 289/818 (35%), Positives = 419/818 (51%), Gaps = 86/818 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
+ K IR +++D+F N +GH V SS +P+ D ++ F N+GM QFK +FLG
Sbjct: 5 MSGKQIRQAYIDFFKN-KGHEYVHSSSTIPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDM 63
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A + RV NSQKC+R GGKHNDL G+D YHHTFFEM+GNWSF DY+K++ C A EFLT
Sbjct: 64 AKWVRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICSWAWEFLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ + LP DRLY TYFGG ++ GL D E +++WL LG+P H+ MK NFWEMG TG
Sbjct: 124 ET-LKLPADRLYVTYFGGDEKNGLAPDNECKELWLSLGIPASHVLPGNMKDNFWEMGETG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+HYD G +A VN D D++EIWN+VFI + R + + PL K +ID G
Sbjct: 183 PCGPCSELHYDRIGGREAA-HLVNMDDPDVLEIWNLVFIQYNREADGNLKPLPKKHIDCG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LG ERLV+++QNK + YDTDLF+PL IEK +GA PY T + +D +YR+L+D+
Sbjct: 242 LGLERLVSVIQNKRANYDTDLFMPLFAAIEKGTGAPPYQGKIGTDDVNRVDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K G L + E+LG+V
Sbjct: 302 ARTITIALADGGIPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFGSLVNVVVELLGEV 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE+ I I+ EE F +KT L G
Sbjct: 361 FPEVTKDPQSIIDIVNEEETQF--------------LKT--------------LSRGRNL 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L + +A+ S + GD+A+ LYDTYG ++ Q + K L + +E+ K +L
Sbjct: 393 LNRTIAKLESNDTVPGDVAWRLYDTYGFPIDLTQLMTEEKGLKIDMAGYEESKKQAQLIS 452
Query: 482 RSKAKAASNVPDIDLMDL-----KHFPVTDDKYKYDYHYDTNS--KRYTF-PCLDTNLVG 533
++K + ++D+ + + TDD KY+Y + + K Y F PC+ T
Sbjct: 453 QNKVGGVDDQINLDVHSITELQERGIKPTDDSPKYNYKITSTTTYKEYEFAPCIGT---- 508
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
I R+ +D Q+ VG++ D+TN YA GGQI D G +L
Sbjct: 509 -------------VIELRRAKTFVD--QVSSGEEVGILLDRTNFYAEQGGQIYDEG--FL 551
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
E ++ I + G ++H G V + G VD R M H+ +H
Sbjct: 552 VKVDDEATEIRIKNVQVRAGYVLHIGTVGEGI-LKKGDQVHANVDTTRRRLVMANHSATH 610
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
LN ALR+VL T QK V D DF+ G ++ + V E ND+I + ++
Sbjct: 611 ALNHALRKVLGTEADQKGSLVAPDRLRFDFTNKG-PMTTEQVKNAENITNDMIKDNKKIY 669
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTH 760
+ + + L + E YPD V ++ + + + P C GTH
Sbjct: 670 AKESNLALAKTIQGLRAMFEETYPDPVRVVSMGVPIEELEKNPLSPVATQTSVEFCGGTH 729
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
+ TGHI + ++ G+R I LTG + A++
Sbjct: 730 LHYTGHIGDFIIASEEAIAKGIRRIVALTGPEAAKALK 767
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG A + RV NSQKCIR GGKHNDL G+D
Sbjct: 32 IPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDMAKWVRVVNSQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEM+GNWSF DY+K++ C A EFLT+ + LP DRLY T+
Sbjct: 92 VYHHTFFEMMGNWSFGDYFKKEICSWAWEFLTE-TLKLPADRLYVTY 137
>gi|357613330|gb|EHJ68441.1| hypothetical protein KGM_22031 [Danaus plexippus]
Length = 957
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 288/829 (34%), Positives = 423/829 (51%), Gaps = 90/829 (10%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRSSF+DYF N GH +KSS +V D ++ FVN+GM QFK +FLGL AP RV NSQ
Sbjct: 7 IRSSFIDYFVNKHGHKNIKSSSVVSLCDRTVPFVNAGMNQFKGIFLGLANAPCTRVVNSQ 66
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVRVGGKHNDL G D +HHTFFEMLGNWSFN+YYK++AC+MA + L P P +
Sbjct: 67 KCVRVGGKHNDLDLVGTDGHHHTFFEMLGNWSFNNYYKKEACQMAWDLLLGPYRMKP-ES 125
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHY 196
L TYF G GL D+E RDIW ++GVP++ +K G + NFWEMG +GPCG +EIHY
Sbjct: 126 LLVTYFSGDAVIGLQEDKECRDIWKKIGVPQNRLKGHGARDNFWEMGPSGPCGPCTEIHY 185
Query: 197 DMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTIL 256
++ D EIWN+VFI R ++ L +++DTGLG ERL +L
Sbjct: 186 ------------IHPD-GSRTEIWNLVFIQCNREVDGSVTALRHHHVDTGLGLERLAALL 232
Query: 257 QNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALAD 316
Q S YDTDLF PL++TIEK + Y F +LDTSYR L+D++R++ + LAD
Sbjct: 233 QGVPSNYDTDLFRPLIKTIEKSAKVPVYEGRFGEG--AELDTSYRRLADHARLLAICLAD 290
Query: 317 NMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQL 376
P ++ ++R + + E + K ++ KL+ E
Sbjct: 291 GALPSTNLNVKQIMRKSFKLRELIAKEREAKLIIE------------------------- 325
Query: 377 ILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITE 436
+E + LR K+WK L K PE+E + +E G LG + + + + S
Sbjct: 326 ---QEKENYTKLRADLAKKWKNLAKRYPEVEALSDIEISGFALGYEEFKETMTKINSKV- 381
Query: 437 ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA----------- 485
I GD+ F +YDT+G +++I+ +A + + + F + L K R K
Sbjct: 382 IPGDLVFKMYDTHGFQEDVIERIAKLNNMEIDKKEFWKLLTNHKLRHKTAFKEQTSKNGI 441
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
K V + ++H T+D KYD+ Y N + TF L T LVGI+ D
Sbjct: 442 KFDKAVEKLAESGIRH---TNDLPKYDFMYSDN--KVTFRPLKTKLVGILNED------- 489
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
G +D + N L+ + TN Y GGQ D GV + +EN +
Sbjct: 490 --------GEWLDFSEPCENRPYYLVTESTNFYCEEGGQAADDGVVQI----RENIGFNV 537
Query: 606 GELASLEGKIVHFGNV----VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+ + G I H G + V+ GL + ++ RL MR HT HLLNAA+R+
Sbjct: 538 HSVFKIRGIIFHKGEFSLKSADNIYVSIGLDVSMAINREKRLSTMRNHTGVHLLNAAVRK 597
Query: 662 VL--TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
VL + Q V +L S+YGE LS +V ++ I+ I+ V + R + +
Sbjct: 598 VLPDSVISQTGSSVTDRGLSLSLSIYGEKLSPRAVEDAQELISSSISANVPILSRTLSTT 657
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
EL + +PGE+YP+ + + +S + + S+E CCGTHV +TG ++S V ++
Sbjct: 658 ELSGEADILTVPGEVYPETGLRM-VSCPQPLASKELCCGTHVPSTGELQSLLVTSVRAMG 716
Query: 780 HGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIPYGDDSIAFV 828
+I LTG AA++ + ++++ + D+ +A +
Sbjct: 717 SRSPTIYALTGS---AAMQARELFCRVQKLTEVIELAEPSRVDEEVAII 762
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 67/85 (78%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ FVN+GM QFK +FLGL AP RV NSQKC+RVGGKHNDL G D +HHTFFEM
Sbjct: 34 DRTVPFVNAGMNQFKGIFLGLANAPCTRVVNSQKCVRVGGKHNDLDLVGTDGHHHTFFEM 93
Query: 882 LGNWSFNDYYKRDACRMALEFLTKP 906
LGNWSFN+YYK++AC+MA + L P
Sbjct: 94 LGNWSFNNYYKKEACQMAWDLLLGP 118
>gi|307187766|gb|EFN72738.1| Alanyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
Length = 968
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 290/829 (34%), Positives = 423/829 (51%), Gaps = 88/829 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
+ +K IR +++D+F ++GH V SS +P+ D ++ F N+GM QFK +FLG
Sbjct: 1 MNAKQIRQAYIDFF-KSKGHEYVHSSSTIPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDM 59
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A + RV NSQKC+R GGKHNDL G+D YHHTFFEM+GNWSF DY+K++ C A EFLT
Sbjct: 60 AKWVRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICAWAWEFLT 119
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ LP DRLY TYFGG ++ GL D+E +D+WL LG+P H+ MK NFWEMG TG
Sbjct: 120 DV-LKLPADRLYVTYFGGDEKNGLAPDDECKDLWLSLGIPASHVLPGNMKDNFWEMGETG 178
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+HYD G +A VN D D++EIWN+VFI + R S ++ L + +ID G
Sbjct: 179 PCGPCSELHYDRIGGREAA-HLVNMDDPDVLEIWNLVFIQYNRESDGSLKSLPRKHIDCG 237
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LG ERLV+++QNK + YDTDLF+PL IEK +GA Y + +D +YR+L+D+
Sbjct: 238 LGLERLVSVIQNKRANYDTDLFMPLFAAIEKATGAPSYQGKVGAEDVDGIDMAYRVLADH 297
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K G L + ++LG+V
Sbjct: 298 ARTITIALADGGMPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFGSLVNVVVDLLGEV 356
Query: 364 YPEI-QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE+ +D N I ++ EE++ L + G
Sbjct: 357 FPEVTKDPQNIIDIVNEEETQFLKTLSR-----------------------------GRN 387
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELK 480
L + +A+ S + GD+A+ LYDTYG ++ Q + K L + +E+ K +L
Sbjct: 388 LLNRTIAKLESSDTVPGDVAWRLYDTYGFPVDLTQLMTEEKGLKIDIAGYEESKKQAQLI 447
Query: 481 ERSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSK--RYTF-PCLDTNLV 532
++KA + ++D+ M TDD KYDY ++ K Y F PC +
Sbjct: 448 SQNKAGGIDDQINLDIHAITEMQEHGIKPTDDSPKYDYKVISSVKYEEYEFAPC-----I 502
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
GIVI A+R A++ Q+ VG++ DKTN YA GGQI D G +
Sbjct: 503 GIVI----------ALRRAKTFVD----QVTSGEEVGILLDKTNFYAEQGGQIYDEG--F 546
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
L E ++ + + G ++H G V + G VD R M H+ +
Sbjct: 547 LVKVDDEATEIRVKNVQVRAGYVLHIG-TVGEGTLRKGDKVYTNVDTARRRLVMANHSAT 605
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
H LN ALR+VL T QK V D DF+ G ++ + V E D++ ++
Sbjct: 606 HALNYALRKVLGTGADQKGSLVAPDRLRFDFTNKG-PMTTEQVKNTENITADMVKENKKI 664
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGT 759
+ + + L + E YPD V +I + + + + P C GT
Sbjct: 665 YAKESNLALAKTIQGLRAMFEETYPDPVRVISMGIPVDDLEKNPLSTAALETSVEFCGGT 724
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
H+ TGHI + ++ G+R I LTG + A L S
Sbjct: 725 HLHYTGHIGDFIIASEEAIAKGIRRIVALTGPEAAKAFRTATLLQNQLS 773
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG A + RV NSQKCIR GGKHNDL G+D
Sbjct: 28 IPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDMAKWVRVVNSQKCIRAGGKHNDLDDVGKD 87
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEM+GNWSF DY+K++ C A EFLT + LP DRLY T+
Sbjct: 88 VYHHTFFEMMGNWSFGDYFKKEICAWAWEFLTD-VLKLPADRLYVTY 133
>gi|115610688|ref|XP_797369.2| PREDICTED: alanine--tRNA ligase, cytoplasmic [Strongylocentrotus
purpuratus]
Length = 1041
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 304/893 (34%), Positives = 451/893 (50%), Gaps = 93/893 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-----LTP 66
L + +R FLD+F H V SS ++PYGD ++ F N+GM QFK++F G +
Sbjct: 76 LQASQVRKKFLDHFQGLNDHVFVPSSSVIPYGDPTLLFTNAGMNQFKDIFQGTIHPDMVQ 135
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
Y RV NSQKC+RVGGKHNDL G+D+ HHTFFEMLGNWSF D++K++AC MAL+ LT
Sbjct: 136 NCYRRVVNSQKCIRVGGKHNDLDDVGKDTTHHTFFEMLGNWSFGDFFKKEACTMALDLLT 195
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
LPL+ LYFTYF G+ + L DE TR IWL+LGVP D + GM NFWEMG+ G
Sbjct: 196 SV-YGLPLENLYFTYFKGNSELQLGADEATRQIWLDLGVPEDRVLPFGMADNFWEMGAVG 254
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG +EIH+D G +A VN D++EIWN+VF+ R A ++ L K+++DTG
Sbjct: 255 PCGPCTEIHFDRHGN-RNASHLVNLGDPDVLEIWNLVFMQFYRNEAGSLHDLPKHHVDTG 313
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV+ILQ S+YDTDLF PL++ +E+ +PY ++ +DT+YR ++D+
Sbjct: 314 MGLERLVSILQGVPSSYDTDLFQPLIKRLEETCPVRPYQGLLGEKDQDHIDTAYRAVADH 373
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+RM+TVA+AD PD+ + ++ V+R A+ + + + G L L + + LG+
Sbjct: 374 ARMLTVAIADGCRPDSQKRGYVIKRVIRRAVRYATEKLQAPPGAL-GSLVHLVVISLGNT 432
Query: 364 YPEI-QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ +D + +I EE + L+K G K
Sbjct: 433 YPELEEDPVYIADVINNEEEQFLTTLKK-----------------------------GEK 463
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE- 481
YL K + S T + GD+A+ +YD YG ++ +A L + E FE+ E KE
Sbjct: 464 YLKKAITELSSQTVLPGDIAWKMYDAYGFPLDLTTLIADENGLGVDIEGFEKSRLESKEI 523
Query: 482 --RSKAKAASNVPDIDL--MDLKHF-----PVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
R K N+ +I L D+ H TDD YKY+Y + K YTFP + +++
Sbjct: 524 TSRGGIKNQQNLSNIKLETTDISHLHELSVKDTDDSYKYNYQHHRRGK-YTFPRIHAHIL 582
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
+ K + A SG +I D+T YA GGQ D G
Sbjct: 583 ALK-------TPKGFVECAASGEE-----------CAIILDRTTFYAEQGGQQWDEG--S 622
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+ E + ++ S G ++H G + + +T V + R +L MR HT +
Sbjct: 623 FVSADDEELMFSVYDVQSYGGYVLHLGTTAETVSIGDHVTLYVNEERREKL--MRNHTGT 680
Query: 653 HLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
H+LN ALR+VL QK V D DF+ +++S + + N++I+N + V
Sbjct: 681 HILNFALRQVLGHIEQKGSSVAPDRFRFDFNAE-KSISDRQLQQISSIANNLISNSLPVH 739
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVI-----------SREPCCGTHV 761
+ + + + L + GE YPD V ++ I ++ + S E C GTHV
Sbjct: 740 QESIPLQKALTIEGLRTMTGETYPDPVTVVCIGHQDGQLNGDMTKLGMETSLELCGGTHV 799
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTG-DSSKAAVENGKHLSTAASF-SQILNVG--- 816
NTGHI ++ K + GVR + +T D A + K L + +++ NV
Sbjct: 800 KNTGHIRRLVIVSEKLVSKGVRRLTVVTSNDVMLADYTSNKFLQRLSQLETEVYNVSTSN 859
Query: 817 NIPYGDDSIAFVNSGMCQFKNVFLGLTPAPY--PRVANSQKCIRVGGKHNDLS 867
N DD IA + S + + + L RVA+ Q ++ K N S
Sbjct: 860 NPEMRDDVIASLESLVEDLEGAHIDLWKKREMNRRVADMQNKLKKADKLNKKS 912
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 78/107 (72%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-----LTPAPYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPYGD ++ F N+GM QFK++F G + Y RV NSQKCIRVGGKHNDL G+D
Sbjct: 104 IPYGDPTLLFTNAGMNQFKDIFQGTIHPDMVQNCYRRVVNSQKCIRVGGKHNDLDDVGKD 163
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+ HHTFFEMLGNWSF D++K++AC MAL+ LT LPL+ LYFT+
Sbjct: 164 TTHHTFFEMLGNWSFGDFFKKEACTMALDLLTS-VYGLPLENLYFTY 209
>gi|157115817|ref|XP_001658296.1| alanyl-tRNA synthetase [Aedes aegypti]
gi|108883466|gb|EAT47691.1| AAEL001218-PA [Aedes aegypti]
Length = 966
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 295/822 (35%), Positives = 426/822 (51%), Gaps = 86/822 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +K IR++FLD+F + H V SS +P D ++ F N+GM QFK +FLG
Sbjct: 5 LTAKQIRNAFLDFFKEKE-HLYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSDM 63
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A + R AN+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A E LT
Sbjct: 64 AKWVRTANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICTWAWELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ LP DRLY TYFGG + GL D E R+IW++LGV +HI MK NFWEMG TG
Sbjct: 124 DR-LKLPKDRLYVTYFGGHPESGLEPDLECREIWIKLGVKEEHILPGSMKDNFWEMGETG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+H+D G S VN D D++EIWN+VFI R ++ L K +ID G
Sbjct: 183 PCGPCSELHFDRIG-GRSVPELVNMDDPDVLEIWNLVFIQFNREQDGSLKLLPKKHIDCG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++Q+K S YDTD+F+PL E I+K +GA Y + +D +YR+L+D+
Sbjct: 242 MGFERLVSVIQDKRSNYDTDVFVPLFEAIQKGTGAPSYQGRVGADDVDGVDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD FPD T + LR ++R A+ + + K G L + +LGD
Sbjct: 302 ARTITIALADGGFPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFATLVDTVVFLLGDT 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I+ I+ EE + F +KT L G
Sbjct: 361 FPEVKKDPQNIKNIINEEEQQF--------------LKT--------------LTRGRNL 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQK------LN 477
L + +A+ I GD+A+ LYDTYG ++ Q +A K +T+ E +E+ L+
Sbjct: 393 LNRTIAKLGDSKVIPGDVAWRLYDTYGFPIDLTQLMAEEKNMTIDMEGYEKAKHESYILS 452
Query: 478 ELKERSKAKAAS-NVPDIDLMDLKHFPVTDDKYKYDYHYDTNS-KRYTF-PCLDTNLVGI 534
+ KE+SKA +V I + K P TDD +KY Y D + Y F PC V
Sbjct: 453 QGKEKSKAATVDLDVHAISELQEKKVPTTDDSFKYRYKADVDPMAEYKFEPC--NGKVLA 510
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+ + +F +D +Q V I DKTN YA +GGQI D G YL
Sbjct: 511 LRANNIF---------------VDEVQAGQECAV--ILDKTNFYAESGGQIYDQG--YLV 551
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E+ + + + + G I+H G V +V G +D R M+ H+ +H
Sbjct: 552 KVGDESTEFNVNLVYNRGGYIIHIGVVEGILRV--GDEVACHMDTLRRQLTMKNHSATHA 609
Query: 655 LNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN +L +VL T Q+ V ++ DF+ ++V+ VA E+ +V+ +Q+
Sbjct: 610 LNHSLLKVLGLDTDQRGSLVVPEKLRFDFT-NKSAMTVEQVAESERLTREVVKKNMQIYA 668
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI-----------SDKENV-ISREPCCGTHV 761
+ + S + L + E+YPD V +I +E V S E C GTH+
Sbjct: 669 KESKLSVAKSIKGLRSVFDEVYPDPVRVISFGVPVENLEANPEGEEGVETSVEFCGGTHL 728
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+GH+ + ++ G+R I LTG + A++ + L
Sbjct: 729 HQSGHMWDFVITTEEAIAKGIRRIVALTGPEALKALKKTELL 770
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG A + R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLGTADPNSDMAKWVRTANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A E LT + LP DRLY T+
Sbjct: 92 VYHHTFFEMLGNWSFGDYFKKEICTWAWELLTD-RLKLPKDRLYVTY 137
>gi|427794607|gb|JAA62755.1| Putative alanyl-trna synthetase translation, partial [Rhipicephalus
pulchellus]
Length = 1015
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 284/799 (35%), Positives = 419/799 (52%), Gaps = 83/799 (10%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVP-YGDDSIAFVNSGMCQFKNVFLGLTPAPY 69
+ ++ R +F+DYF + GH SS +VP + D S+ F NSGM QFK VFLG
Sbjct: 50 KFSAREARQAFVDYFVDGHGHQFFPSSSVVPSFADKSLLFTNSGMNQFKGVFLGTVEPSS 109
Query: 70 P-----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEF 124
P R AN QKC+RVGGKHNDL G+D HHTFFEMLGNWSF DY+K++AC MA E
Sbjct: 110 PLYGLQRAANYQKCIRVGGKHNDLDDVGKDLSHHTFFEMLGNWSFGDYFKKEACTMAWEL 169
Query: 125 LTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGS 184
LTK LP +RLY TYF G GL DEE R +WL++GVP++ I GMK NFWEMG+
Sbjct: 170 LTK-VYQLPKERLYVTYFAGDPSLGLQPDEECRHVWLDIGVPQERILPFGMKENFWEMGN 228
Query: 185 TGPCGYSSEIHYDMKGEPSSA---LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
GPCG +EIH D+ S+ + RVNA +D++E+WN+VF+ R + + L K
Sbjct: 229 VGPCGPCTEIHIDLAESGCSSSPPVHRVNAGHSDMVELWNLVFMEFNRGADGQLHSLPKK 288
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
++DTG+G ERL +LQN S YDTDLF PL+ ++K + PY + N +D +YR
Sbjct: 289 HVDTGMGLERLAAVLQNVKSNYDTDLFSPLITALQKKARVNPY--SGLVGNDCFVDIAYR 346
Query: 302 MLSDYSRMITVALADNMFP---DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAE 358
+ D++RM TVA++D + P DA KLR ++R A K +G L L+ ++
Sbjct: 347 IAVDHARMFTVAISDGVLPEHADAGNKLRRIIRKASHAVIWHLKCDRGTLAL-LAEDVQH 405
Query: 359 ILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
+LGDVYP I + K ++ EE + + KA T E++ N++
Sbjct: 406 LLGDVYPGINIELVK-NIVTAEEDKYLHQMSKAEA--------TLKEVKTPNVL------ 450
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
G A+ LY +GL K++I +LAA + L++ + FEQ E
Sbjct: 451 -------------------PGRTAWELYVQHGLQKDLITDLAAKRGLSVDWKQFEQLFKE 491
Query: 479 LKERSKAKAAS-------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNL 531
+++S + + N+PD L+ V Y Y + + Y FP L T +
Sbjct: 492 FQKKSASGRTNEEIDLFHNLPD-HAEHLRKLGVAPTNTDSIYFYTSRNGVYDFPSLKTTV 550
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
+ VFC + ++ AR G EH ++ + TN Y GGQ+ D G
Sbjct: 551 ------EAVFC-NGQSVTSARQG--------EHCI---VVTNATNFYFENGGQVSDTG-- 590
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTT 651
Y+ G+V + ++ + G + H G +V++ + + + +D + RL CM HT
Sbjct: 591 YIKTKC---GEVAVHDVKNCSGFVFHKG-IVTTGVIHQEDEAEMWIDKQRRLQCMIHHTA 646
Query: 652 SHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
+H LNAALR VL T Q+S V S+ DF + + L+ + + ++ D I V
Sbjct: 647 THCLNAALRTVLESTEQRSSLVDSEHLRFDF-ICKKNLTSEQIEKIQDICRDAIQAGCTV 705
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
RR++ L L +P E+YP V +I I +++++ S+E CCGTHV + +
Sbjct: 706 ARRNIPLERALNLRDLVKVPNEVYPKTVSVIRIGNEDDIFSQELCCGTHVSSLSDLGEIV 765
Query: 772 VIGYKSYNHGVRSIKCLTG 790
V ++S VRSI+ + G
Sbjct: 766 VTSHQSVGTIVRSIRAVAG 784
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 71/105 (67%), Gaps = 6/105 (5%)
Query: 820 YGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRDSY 874
+ D S+ F NSGM QFK VFLG P R AN QKCIRVGGKHNDL G+D
Sbjct: 82 FADKSLLFTNSGMNQFKGVFLGTVEPSSPLYGLQRAANYQKCIRVGGKHNDLDDVGKDLS 141
Query: 875 HHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNWSF DY+K++AC MA E LTK LP +RLY T+
Sbjct: 142 HHTFFEMLGNWSFGDYFKKEACTMAWELLTK-VYQLPKERLYVTY 185
>gi|312373153|gb|EFR20960.1| hypothetical protein AND_18235 [Anopheles darlingi]
Length = 998
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 303/929 (32%), Positives = 457/929 (49%), Gaps = 103/929 (11%)
Query: 6 ISSYVRLCSKS----------IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMC 55
++++VRL S S IR F+DYF H L++SS +VP+ D +IAFVN+GM
Sbjct: 21 VANHVRLLSVSGARTGPSANEIRRQFIDYFTIKHNHRLIRSSSLVPFSDGTIAFVNAGMN 80
Query: 56 QFKNVFLGLTPAPYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKR 115
QFKNVFLG P PR NSQKCVRVGGKHNDLS G DSYHHTFFEMLGNWSF DY+KR
Sbjct: 81 QFKNVFLGTADRPCPRAVNSQKCVRVGGKHNDLSVVGTDSYHHTFFEMLGNWSFGDYFKR 140
Query: 116 DACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGM 175
+AC MA + L + + ++R+Y TYFGG + LP DEE RDIWL LG+PR+ + G
Sbjct: 141 EACEMACDLL-RTVYHIDMERVYVTYFGGDARLNLPADEECRDIWLSLGIPRERVLPFGA 199
Query: 176 KCNFWEMGSTGPCGYSSEIHYDMKGEPSSALAR---VNADRNDLIEIWNIVFISHKRV-- 230
+ NFWEMG++GPCG +EIH D+ + +R VNA DL EIWNIVFI + R
Sbjct: 200 RDNFWEMGNSGPCGPCTEIHLDLSDQYRDTGSRRQYVNAGLPDLTEIWNIVFIQYNRSLE 259
Query: 231 -SADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFT 289
I L + ++DTG+G ERLV LQ K S YDTDLF P+L+ I++V A
Sbjct: 260 GDGGAIRNLPQRHVDTGMGLERLVAHLQGKLSNYDTDLFTPILQRIQQVQIAG------- 312
Query: 290 TSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLV 349
T + KLR V+R +L ++ F ++ KL+
Sbjct: 313 ---------------------THRWHIHHIIPICHKLRRVIRKSLALASGTF--ERPKLL 349
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
+E + E LG++YPE+ ++++ + I+ E +D L E L+K P+LE+
Sbjct: 350 EETIPVVVETLGEMYPEMGNNLSTVLQIIEHEQHSYDKLCSKRSAETATLLKCYPQLEES 409
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
+++ GL +K L + +++ + G +YDTYGL + ++ +L K +L
Sbjct: 410 EVLDHAGLPGAIKELV-----ESNVSRLDGVKIHKMYDTYGLDEELLVKLGEMLKFSLDF 464
Query: 470 EAFEQKLNELKERSKAKAASNVPD--------IDLMDLKHFPVTDDKYKYDYHYDTNSKR 521
+E+ ELK K + AS + + D ++ T + KY+Y Y+ +
Sbjct: 465 RDYERYAGELKHGFKHELASRLEERLSAFQQLRDSIEGAQLEATRCERKYNYAYNAEKRI 524
Query: 522 YTF-PCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYAT 580
Y PC + V +++ D + W ++ +++N Y
Sbjct: 525 YEVAPC--STRVSLLLDDPA-----------------------RDLW-HVVTERSNFYCE 558
Query: 581 AGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
+GGQ D G L + N +EI + G IVH + +++ G ++VDA
Sbjct: 559 SGGQQSDTGRLIL---PEGNVSIEITSVNDHNGFIVHSIAKQPNIRLSIGDPVELQVDAS 615
Query: 641 MRLGCMRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R HT +HLLNA +R+V+ Q+S V L+ ++ G+ L+++ +AA+E
Sbjct: 616 RRTSLTLNHTATHLLNAIVRKVVPLPMCQRSSSVTEKGLRLELAISGDKLTLEQIAAIES 675
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
I VI V + A+EL LT +T++PGE YP+ + + IS S+E CCGT
Sbjct: 676 EIRSVIDRNEPVSVKVCNATELD-LTSVTIVPGETYPERGLRV-ISIGGGYTSQELCCGT 733
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIP 819
H TG ++ + +G + + G ++K G + +Q+
Sbjct: 734 HATGTGELQDFAITSVTQSKNGCFTFHAVAGPAAKKVHLLGTQIQN--DVAQLQQDAEQN 791
Query: 820 YGDDSIAFVNSGMCQFKNVFLGLTP----APYPRVANSQKCIRV-GGKHNDLSFAGRDSY 874
G + I + + + + K+V L T PY Q+C+ V + L R+S
Sbjct: 792 EGQEDITIIETRLQRLKSVLLTGTDNNMHLPY---CVRQRCLEVISTLYQKLKDRSRESL 848
Query: 875 HHTFFEMLGNWSFNDYYKRDACRMALEFL 903
+ N RD R + FL
Sbjct: 849 RELVDIEMRNLMEQRPANRDEHRFIVHFL 877
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D +IAFVN+GM QFKNVFLG P PR NSQKC+RVGGKHNDLS G DSYHHT
Sbjct: 65 VPFSDGTIAFVNAGMNQFKNVFLGTADRPCPRAVNSQKCVRVGGKHNDLSVVGTDSYHHT 124
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+KR+AC MA + L + + ++R+Y T+
Sbjct: 125 FFEMLGNWSFGDYFKREACEMACDLL-RTVYHIDMERVYVTY 165
>gi|348572772|ref|XP_003472166.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Cavia
porcellus]
Length = 968
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 289/825 (35%), Positives = 418/825 (50%), Gaps = 82/825 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRERFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPL 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P+DRLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVDRLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + T+ PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRETDGTLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
K ++ +D+ + K TDD KYDYH D+ Y F + V V+
Sbjct: 453 HGKGAGGEDLIMLDIYAIEELRAKGLEATDDSPKYDYHSDSGGS-YVF----ESAVATVL 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + S KV G R+ +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNTQVRGGYVLHIGTIYGSLKV--GDQVRLFIDEPRRRPIMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ N++I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKPVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLQN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H + ++ ++ G+R I +TG ++ A+ + LS + S
Sbjct: 731 SSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLSKSLS 775
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P+DRLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVDRLYVTY 137
>gi|158298580|ref|XP_318757.4| AGAP009701-PA [Anopheles gambiae str. PEST]
gi|157013952|gb|EAA14564.4| AGAP009701-PA [Anopheles gambiae str. PEST]
Length = 946
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 288/828 (34%), Positives = 434/828 (52%), Gaps = 87/828 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L + IRS FLD+F + H V SS ++P D ++ F N+GM QFK +FLG
Sbjct: 5 LTASQIRSIFLDFFKEKE-HLYVHSSSVIPLDDPTLLFANAGMNQFKPIFLGTVDPNSDM 63
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A + R AN+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A E LT
Sbjct: 64 AKWVRTANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICTWAWELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ + LP +RLY TYFGG + GL D E R+IWL+LGV +HI MK NFWEMG TG
Sbjct: 124 ER-LKLPKERLYVTYFGGHPESGLEPDLECREIWLKLGVKEEHILPGSMKDNFWEMGETG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+H+D G S VN D D++EIWN+VFI + R ++ L K +ID G
Sbjct: 183 PCGPCSELHFDRIG-GRSVPELVNMDDPDVLEIWNLVFIQYNREQDSSLKLLPKKHIDCG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++Q+K S YDTD+F+PL + I+K +GA Y + +D +YR+L+D+
Sbjct: 242 MGFERLVSVIQDKRSNYDTDVFMPLFDAIQKGTGAAAYQGRVGADDSDGVDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD FPD T + LR ++R A+ + + K G L + ++LG+
Sbjct: 302 ARTITIALADGGFPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFATLVDTVVQLLGET 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I+ ++ EE + F +KT L G
Sbjct: 361 FPEVRKDPQHIKNVINEEEQQF--------------LKT--------------LTRGRNL 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + +A+ + I GD+A+ LYDTYG ++ +A K++T+ E +E+ +E S
Sbjct: 393 LNRTIAKLGNSKVIPGDVAWRLYDTYGFPIDLTLLMAEEKQMTIDMEGYEKAKHESYIIS 452
Query: 484 KAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNS--KRYTF-PCLDTNLVG 533
+ K S IDL + + P TDD +KY Y ++ +Y F PC G
Sbjct: 453 QGKEKSKTATIDLDVHGISELQERKVPATDDSFKYRYKAESIDPLAQYVFEPC-----TG 507
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
++ A+R + A ++ +Q G+I D+TN YA +GGQI D G +L
Sbjct: 508 KIV----------ALRF--NNAFVEEVQAGQEC--GVILDRTNFYAESGGQIYDQG--FL 551
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
E+ + + + + G ++H G V + +V G +D R M+ H+ +H
Sbjct: 552 VKVNDESSEFNVSLVYNRGGYVLHIGVVEGTLRV--GDEVHCHMDVVRRQLTMKNHSATH 609
Query: 654 LLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
LN +L +VL T Q+ V ++ DF+ ++++ VA E+ +V+ VQV
Sbjct: 610 ALNHSLLKVLGQDTDQRGSLVVPEKLRFDFT-NKSAMTIEQVAEAERLTREVVKRNVQVY 668
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILI-----------DISDKENVI-SREPCCGTH 760
+ + + L + E+YPD V +I D + + VI S E C GTH
Sbjct: 669 AKEANLAVAKTIRGLRSVFDEVYPDPVRVISFGVPVEQLEADPTGEAGVINSVEFCGGTH 728
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ +GH+ + ++ G+R I LTG + A++ + L S
Sbjct: 729 LHQSGHMVDFVITTEEAIAKGIRRIVALTGPEALKALKKTELLEQELS 776
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG A + R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLGTVDPNSDMAKWVRTANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A E LT+ + LP +RLY T+
Sbjct: 92 VYHHTFFEMLGNWSFGDYFKKEICTWAWELLTE-RLKLPKERLYVTY 137
>gi|209862801|ref|NP_001093987.1| alanine--tRNA ligase, cytoplasmic [Rattus norvegicus]
gi|261260086|sp|P50475.3|SYAC_RAT RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|149038198|gb|EDL92558.1| alanyl-tRNA synthetase [Rattus norvegicus]
Length = 968
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 289/829 (34%), Positives = 423/829 (51%), Gaps = 82/829 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L ++ IR F++YF + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAREIRERFINYFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTVDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E R IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVERLYVTYFGGDEAAGLEPDLECRQIWQNLGLDEAKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R S + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRESDGVLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDTDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDCQTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + K TDD KY+YH D+ S Y F C V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRAKGLEATDDSPKYNYHSDS-SGSYVFEC----TVATVL 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
A+R R +D + G++ DKT YA GGQI D G + + +
Sbjct: 508 ----------ALR--REKMFVDEVVTGQEC--GVVLDKTCFYAEQGGQIFDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + + +V G R+ +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGNLRV--GDQVRLFIDEPRRRPVMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + + E+ +N +I V
Sbjct: 612 NFALRSVLGDADQKGSLVAPDRLRFDFTAKG-AMSTEQIKKTEEIVNGMIEAAKPVYTLD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQI 812
+ H + ++ ++ G+R I +TG ++ A+ + L + S ++
Sbjct: 731 SSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLKKSLSAMEV 779
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTVDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 137
>gi|194759416|ref|XP_001961945.1| GF14684 [Drosophila ananassae]
gi|190615642|gb|EDV31166.1| GF14684 [Drosophila ananassae]
Length = 966
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 286/817 (35%), Positives = 417/817 (51%), Gaps = 85/817 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +K +R ++LD+F Q H V SS +P D ++ F N+GM QFK +FLG
Sbjct: 4 LTAKEVRDAYLDFF-KEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEM 62
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A + RVAN+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A +FLT
Sbjct: 63 AKWVRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWQFLT 122
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ + LP DRLY TYFGG GL D E + +WL+LG+ +HI MK NFWEMG TG
Sbjct: 123 ER-LGLPKDRLYVTYFGGDKASGLEPDLECKQLWLDLGLKPEHILPGSMKDNFWEMGETG 181
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+H+D G S VN D D++EIWN+VFI R S ++ PL K +ID G
Sbjct: 182 PCGPCSELHFDRIG-GRSVPELVNMDDPDVLEIWNLVFIQFNRESDGSLKPLPKKHIDCG 240
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++QNK S YDTDLF+PL E I+ +GA Y T + +D +YR+L+D+
Sbjct: 241 MGFERLVSVIQNKRSNYDTDLFVPLFEAIQAGTGAPAYQGRVGTDDVDGIDMAYRVLADH 300
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K G L + ++LGD
Sbjct: 301 ARTITIALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFASLVNTVVDLLGDA 359
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I I+ EE F +KT L G
Sbjct: 360 FPEVKKDPQHIIDIINEEELQF--------------LKT--------------LTRGRNL 391
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + + + S I GD+A+ LYDTYG ++ Q +A K L + E +E + S
Sbjct: 392 LNRTIEKLGSQATIPGDVAWRLYDTYGFPVDLTQLMAEEKSLQIDMEGYEAAKHNSYILS 451
Query: 484 KAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHY--DTNSKRYTFPCLDTNLVGI 534
+ K AS + +I+L + + T+D +KY Y D Y + + +V +
Sbjct: 452 QGKGASKIEEINLDVHAISQLQEQGVAPTNDSFKYKYEAVSDERDSAYNYGECTSKIVAL 511
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+Q + SG G++ DKTN YA +GGQI D G L
Sbjct: 512 RFENQF-------VNEITSGQK-----------AGIVLDKTNFYAESGGQIYDQGA--LV 551
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E + + + + G I+H G V + KV L ++ +D R M+ H+ +H
Sbjct: 552 KVNDEANEFLVDRVYNRGGYILHIGVVEGTLKVGDEL--QLHIDVERRWLTMKNHSATHA 609
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN L +VL T QK V ++ DF+ G ++++ VA E +++ N V +
Sbjct: 610 LNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKG-AMTIEQVAKTENLTKEMVYNNVPIYA 668
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
+ + + + L + E+YPD V +I S+ S E C GTH+
Sbjct: 669 KESKLALAKKIRGLRSVFDEVYPDPVRVISFGVPVDELEQNPDSEAGEKTSVEFCGGTHL 728
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
+GHI + ++ G+R I LTG + A++
Sbjct: 729 RRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALK 765
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG A + RVAN+QKCIR GGKHNDL G+D
Sbjct: 31 IPLDDPTLLFANAGMNQFKPIFLGTADPNSEMAKWVRVANTQKCIRAGGKHNDLDDVGKD 90
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A +FLT+ + LP DRLY T+
Sbjct: 91 VYHHTFFEMLGNWSFGDYFKKEICSWAWQFLTE-RLGLPKDRLYVTY 136
>gi|442755487|gb|JAA69903.1| Putative alanyl-trna synthetase translation [Ixodes ricinus]
Length = 968
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 288/828 (34%), Positives = 431/828 (52%), Gaps = 101/828 (12%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLT-----PAP 68
+ IR F+D+F H V+SS ++P+ D ++ F N+GM QFK +FLG
Sbjct: 4 AAEIRQQFIDFFAQKYDHLHVRSSSVIPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDAGK 63
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
Y RV ++QKC+R GGKHNDL G+D YHHTFFEMLGNWSF D++K++ C A E LTK
Sbjct: 64 YKRVVDTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDFFKKEICSWAWELLTKV 123
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
L +RLY TYFGG++ GL D E + IW+ LGVP + I MK NFWEMG TGPC
Sbjct: 124 -YKLREERLYVTYFGGNEAAGLEPDLECKQIWMNLGVPEERILPGSMKDNFWEMGETGPC 182
Query: 189 GYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
G SEIHYD + G +S L VNAD D++EIWN+VFI + R + + L K ++DTG+
Sbjct: 183 GPCSEIHYDRIGGRNASHL--VNADVPDVLEIWNLVFIQYNRETDGKLRLLPKQHVDTGM 240
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV+++Q+K S YDTD+F+P+ + I+K +G +PY + +D +YR+L+D+S
Sbjct: 241 GFERLVSVIQDKPSNYDTDVFVPIFDAIQKATGVRPYQGRGGKEDTDGIDMAYRVLADHS 300
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T+AL+D PD + LR ++R A+ + + G L + +ILGDV+
Sbjct: 301 RTLTIALSDGGRPDNVGRGYVLRRILRRAVRYATEKMNAAPGTFAS-LVPVVVQILGDVF 359
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ + I+ EE F +KT L G + L
Sbjct: 360 PELKKDTESVMDIINEEEGQF--------------LKT--------------LSRGRRLL 391
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
K + + + GD+A+ LYDTYG ++ Q + K L + E++E K ++
Sbjct: 392 EKTVNKLGDQKFLPGDVAWRLYDTYGFPIDLTQLMVEEKGLAVDMESYE------KAKAA 445
Query: 485 AKAASNVPD-------------IDLMDLKHFPVTDDKYKYDYHYDTNSKRYTF---PCLD 528
A+ AS D I + K+ P T+D KYDY +N K ++ PC
Sbjct: 446 AQLASQAGDSKVDDGLKLDVHAIADLQSKNVPTTNDLPKYDYRATSNDKAASYEFSPCSG 505
Query: 529 TNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI 588
T LV +R ++ ++SI E G+I D+TN YA +GGQ D
Sbjct: 506 TVLV---------------LRTSKQ--FVESI--EAGQQCGVILDQTNFYAESGGQTYDT 546
Query: 589 GVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVS-SFKVTPGLTSRVEVDARMRLGCMR 647
G ++T T E+ + + E+ + G +VH G ++S + KV L ++ +D + R M
Sbjct: 547 G--FMTCETNEDVEFAVTEVHTQGGYVVHIGRLISGTLKVGDKL--KLAIDEQRRKLVMN 602
Query: 648 AHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIA 706
HT +H+LN ALR+VLT Q+ V D DF+ + +S V A E+ ++I+
Sbjct: 603 NHTGTHILNFALRKVLTAEADQRGSLVAPDRLRFDFA-NKKPMSPAEVKAAEQSAVELIS 661
Query: 707 NQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISRE 754
+V + S + L + E YPD V ++ I S ++ S E
Sbjct: 662 KNGEVYAKDSPLSLAKAIQGLRAVFNETYPDPVRVVSIGVPVDDLMADPSSPAGSLTSIE 721
Query: 755 PCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKH 802
C GTH+ GH+ + ++ G+R I LTG + A++ +H
Sbjct: 722 FCGGTHLKRAGHVGDFVITTEEAIAKGIRRIVALTGPEAAKALKKAEH 769
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLT-----PAPYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG Y RV ++QKCIR GGKHNDL G+D
Sbjct: 30 IPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDAGKYKRVVDTQKCIRAGGKHNDLDDVGKD 89
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF D++K++ C A E LTK L +RLY T+
Sbjct: 90 VYHHTFFEMLGNWSFGDFFKKEICSWAWELLTK-VYKLREERLYVTY 135
>gi|348503890|ref|XP_003439495.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Oreochromis
niloticus]
Length = 966
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 289/829 (34%), Positives = 419/829 (50%), Gaps = 90/829 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+FC + H V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LNAAQIRQKFIDFFCRYE-HQYVHSSSTIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 ARLHRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +PL+RLY TYFGG++ GL D E + IW++LGV I MK NFWEMG TG
Sbjct: 124 QE-FGIPLERLYVTYFGGNEDAGLEPDLECKQIWMDLGVDEARILPGSMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
PCG SEIHYD + G +S L VN D +++EIWN+VFI R S + PL K IDT
Sbjct: 183 PCGPCSEIHYDRIGGRDASHL--VNMDDPNVLEIWNLVFIQFNRESETELKPLPKKSIDT 240
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D
Sbjct: 241 GMGLERLVSVLQNKMSNYDTDLFIPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLAD 300
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
++R IT+AL+D PD T + LR ++R A+ S + ++G L + + LG+
Sbjct: 301 HARTITIALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQRG-FFASLVDVVVDSLGE 359
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE++ ++ I+ EE F +KT L G +
Sbjct: 360 AFPELKKDPEMVKDIINEEEAQF--------------LKT--------------LSRGRR 391
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L +++ I GD A+ LYDTYG ++ +A K + + FE++ + +
Sbjct: 392 ILDRKIMSLADTKTIPGDTAWLLYDTYGFPLDLTSLIAEEKGMEVDLAGFEEEKKAAQLK 451
Query: 483 SKAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
S+ K A + I ++D+ K P TDD KY+Y D N Y F ++ +
Sbjct: 452 SQGKGAGDEDHI-MLDIYAIEELRNKQIPATDDSPKYNYTSDENGN-YQFQQASATVLAL 509
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL- 593
D+ FC D + G++ D+T+ YA GGQ D G YL
Sbjct: 510 R-RDRAFC---------------DEVTTGQE--CGVVLDQTSFYAEQGGQTFDEG--YLL 549
Query: 594 --TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTT 651
++T++ + + G ++H G V + KV +T + VD R M HT
Sbjct: 550 REDDSTEDRMEFSVKNTQVRGGYVLHVGTVYGTLKVGDRVT--LHVDEARRRPIMSNHTA 607
Query: 652 SHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
+H+LN ALR VL Q+ V D DF+ G LS D + E+ +I + V
Sbjct: 608 THILNFALRGVLGEADQRGSLVAPDRLRFDFTAKG-ALSTDEIRRTEEIACTMIKDAKTV 666
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGT 759
+E + L + E YPD V ++ I S ++ S E C GT
Sbjct: 667 YAMEATLAEAKAIQGLRAVFDETYPDPVRVVSIGIPVPELLADPNSAAGSLTSIEFCGGT 726
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
H+ N+GH ++ ++ G+R I +TG ++ A L + S
Sbjct: 727 HLQNSGHAAPFVIVSEEAIAKGIRRIVAVTGTEAQKAQRKADALRQSLS 775
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMARLHRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +PL+RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPLERLYVTY 137
>gi|395836962|ref|XP_003791415.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Otolemur garnettii]
Length = 968
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 288/828 (34%), Positives = 421/828 (50%), Gaps = 82/828 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDGKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGADDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LG+
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGEA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGETKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + K VTDD KY+YH D+ S Y F N V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRAKGLEVTDDSPKYNYHSDS-SGSYVF----ENTVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + KV G R+ +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGDLKV--GDQVRLFIDEPRRRPVMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ N++I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKPVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
S + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLSTAKAIQGLRAVFDETYPDPVRVVSIGVPVSKLLDDPSGPAGSLTSVEFCGGTHLRN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQ 811
+ H + ++ ++ G+R I +TG ++ A+ ++L T+ S +
Sbjct: 731 SSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAENLKTSLSIME 778
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 137
>gi|332020821|gb|EGI61219.1| Alanyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
Length = 1010
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 288/821 (35%), Positives = 422/821 (51%), Gaps = 88/821 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
+ +K IR +++D+F ++GH V SS +P+ D ++ F N+GM QFK +FLG
Sbjct: 42 MNAKQIRQAYIDFF-KSKGHEYVHSSSTIPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDM 100
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A + RV NSQKC+R GGKHNDL G+D YHHTFFEM+GNWSF DY+K + C A EFLT
Sbjct: 101 AKWVRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKNEICAWAWEFLT 160
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ LP DRLY TYFGG ++ GL D+E +++WL LGVP H+ MK NFWEMG TG
Sbjct: 161 DV-LKLPADRLYVTYFGGDEKSGLAPDDECKNLWLSLGVPASHVLPGNMKDNFWEMGETG 219
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+HYD G +A VN D D++EIWN+VFI + R ++ L K +ID G
Sbjct: 220 PCGPCSELHYDRIGGREAA-HLVNMDDPDVLEIWNLVFIQYNRELNGSLKSLPKKHIDCG 278
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LG ERLV+++QNK + YDTD+F+PL IE+ +GA PY + +D +YR+L+D+
Sbjct: 279 LGLERLVSVIQNKRANYDTDVFMPLFAAIEEGTGAPPYQGKVGADDVNGIDMAYRVLADH 338
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R +T+ALAD PD T + LR ++R A+ + + KQG L + ++LGDV
Sbjct: 339 ARTLTIALADGGVPDNTGRGYVLRRILRRAVRYATEKLNAKQG-FFGSLVNVVVDLLGDV 397
Query: 364 YPEI-QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE+ +D + I++I EES+ L + G
Sbjct: 398 FPEVRKDPQSIIEIINEEESQFLKTLSR-----------------------------GRN 428
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L + +A+ S + GD+A+ LYDTYG ++ Q + K L + +E+ + +
Sbjct: 429 LLNRTIAKLESADTVPGDVAWRLYDTYGFPIDLTQLMTEEKGLKIDIAGYEESKKQAQLI 488
Query: 483 SKAKAAS-------NVPDIDLMDLKHFPVTDDKYKYDYHYDT--NSKRYTF-PCLDTNLV 532
S+ KA +V I + + TDD KYDY T K Y F PC
Sbjct: 489 SQNKAGGVDDQINFDVHAITELQKQGVKPTDDSPKYDYKVTTEIKYKEYEFAPC-----T 543
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
G VI A+R A++ ++ VG++ D+TN YA GGQI D G +
Sbjct: 544 GTVI----------ALRRAKTFVD----EVSSGEEVGILLDRTNFYAEQGGQIYDEG--F 587
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
L E ++ I + G ++H G V + G VD R M H+ +
Sbjct: 588 LVKVDDETTEIRIKNVQIRAGYVLHIG-TVGEGTLRKGDKVHTNVDTERRRFVMANHSAT 646
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
H+LN ALR+VL T QK V D DF+ G ++ + E+ N+VI ++
Sbjct: 647 HVLNYALRKVLGTKADQKGSLVAPDRLRFDFTNKG-PMTGGQLQDTEQLANNVITENEKI 705
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGT 759
+ + + L + E YPD V ++ + + ++P C GT
Sbjct: 706 YAKESNLAIAKTIQGLRAMFEETYPDPVRVVSVGIPVENLEKDPLSTAALETSVEFCGGT 765
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENG 800
H+ T HI + T++ + G+R I LTG + A+ G
Sbjct: 766 HLHYTSHIGNFTIVSEDAIAKGIRRIVALTGPEAAKALRTG 806
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG A + RV NSQKCIR GGKHNDL G+D
Sbjct: 69 IPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDMAKWVRVVNSQKCIRAGGKHNDLDDVGKD 128
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEM+GNWSF DY+K + C A EFLT + LP DRLY T+
Sbjct: 129 VYHHTFFEMMGNWSFGDYFKNEICAWAWEFLTD-VLKLPADRLYVTY 174
>gi|91084029|ref|XP_966465.1| PREDICTED: similar to alanyl-tRNA synthetase [Tribolium castaneum]
gi|270006700|gb|EFA03148.1| hypothetical protein TcasGA2_TC013061 [Tribolium castaneum]
Length = 965
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 283/824 (34%), Positives = 419/824 (50%), Gaps = 86/824 (10%)
Query: 10 VRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP--- 66
+ + +K +R++++++F + H V SS +P D ++ F N+GM QFK +FLG
Sbjct: 3 ISMSAKDVRNAYINFF-KEKNHDYVHSSSTIPLDDPTLLFTNAGMNQFKPIFLGTVDPNS 61
Query: 67 --APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEF 124
A R NSQKC+R GGKHNDL G+D YHHTFFEM+GNWSF DY+K++ C A EF
Sbjct: 62 DLAKLTRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICAWAWEF 121
Query: 125 LTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGS 184
LTK + LP DRLY TYFGG GL D E + IWL LGVP H+ MK NFWEMG
Sbjct: 122 LTKR-LHLPGDRLYVTYFGGDKAAGLEPDNECKQIWLGLGVPESHVLPGSMKDNFWEMGE 180
Query: 185 TGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
TGPCG SE+H+D G VN D D++EIWN+VFI + R S ++ L K +ID
Sbjct: 181 TGPCGPCSELHFDRIG-GRDVPELVNQDDPDVLEIWNLVFIQYNRESDGSLKFLPKKHID 239
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
GLG ERLV+I+QNK S YDTDLFLPL + I+K +GA PYG +++ +D +YR+L+
Sbjct: 240 CGLGLERLVSIMQNKRSNYDTDLFLPLFDAIQKGTGAPPYGGKIGDADKDGIDMAYRVLA 299
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D++R IT+AL+D PD T + LR ++R A+ + + K G L + EILG
Sbjct: 300 DHARTITIALSDGGNPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFSTLVNTVVEILG 358
Query: 362 DVYPEI-QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
D +PE+ +D + I I EE + L + G
Sbjct: 359 DTFPEVCKDPQSIIDTINEEEEQFLKTLSR-----------------------------G 389
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNE 478
L + + + + GD+A+ LYDTYG ++ Q +A K L + +E+ KL +
Sbjct: 390 RNLLNRTITKLGDSKTLPGDVAWRLYDTYGFPVDLTQLMAEEKGLNVDMAVYEESKKLAQ 449
Query: 479 LKERSKAKAASNVPDIDLMDLKHF-----PVTDDKYKYDYHYDTN-SKRYTFPCLDTNLV 532
+ + K + ++D+ + P TDD KY+Y + ++ Y F + ++
Sbjct: 450 IASQGKGSGVEDTINLDVHAITELQNLGVPPTDDAPKYNYIAGSGINEEYKFELCHSTVI 509
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
A+RH + Q+ G++ DKTN YA GGQI D G Y
Sbjct: 510 --------------ALRHNKQFVE----QVHTGQECGILLDKTNFYAEQGGQIYDTG--Y 549
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+ E+ + + + G ++H G++ + K G + VD+ R M HT +
Sbjct: 550 IVKIGDESVEFSVKNVQVRGGYVIHIGSLEGTLK--KGDKVALHVDSARRRLIMNNHTGT 607
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
H+LN ALR+VL T Q+ V D DF+ G ++VD V E ++I+ QV
Sbjct: 608 HVLNYALRKVLGTEADQRGSLVAPDRLRFDFTNKG-AMTVDQVKNTELNSKELISRNDQV 666
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGT 759
+ + + L + E YPD V ++ I + +P C GT
Sbjct: 667 FAKESNLAVAKTIRGLRAVFEETYPDPVRIVSIGIPVEKLEVDPFGPAGDNTSIEFCGGT 726
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
H+ +GHI + ++ G+R I LTG + A++ ++L
Sbjct: 727 HLKYSGHIGDFVIASEEAIAKGIRRIVALTGPEATKALKRTEYL 770
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFTNAGMNQFKPIFLGTVDPNSDLAKLTRAVNSQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEM+GNWSF DY+K++ C A EFLTK + LP DRLY T+
Sbjct: 92 VYHHTFFEMMGNWSFGDYFKKEICAWAWEFLTK-RLHLPGDRLYVTY 137
>gi|73957022|ref|XP_536788.2| PREDICTED: alanyl-tRNA synthetase, cytoplasmic isoform 1 [Canis
lupus familiaris]
Length = 968
Score = 454 bits (1168), Expect = e-124, Method: Compositional matrix adjust.
Identities = 286/825 (34%), Positives = 418/825 (50%), Gaps = 82/825 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R S + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRESDGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGADDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K + + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDCNTIPGDTAWLLYDTYGFPVDLTGLIAEEKGMVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDLMDL-----KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + K T+D KY+YH D+ S YTF N+V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELREKGLEATEDSPKYNYHSDS-SGSYTF----ENVVATVV 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
DK + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRRDKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVED 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+++ + + G ++H G + S +V G R+ +D R M HT +H+L
Sbjct: 554 NSEDKMEFTVKNAQVRGGYVLHIGTIYGSLRV--GDQVRLFIDEPRRRPIMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ N +I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANGMIEAAKPVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFN 763
+ + L + E YPD V ++ I + + +P C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLEDPSGPAGSLTSVEFCGGTHLQN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 731 SSHAGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKNSLS 775
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 137
>gi|17861846|gb|AAL39400.1| GM03058p [Drosophila melanogaster]
Length = 966
Score = 454 bits (1168), Expect = e-124, Method: Compositional matrix adjust.
Identities = 283/817 (34%), Positives = 421/817 (51%), Gaps = 85/817 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +K +R+++LD+F Q H V SS +P D ++ F N+GM QFK +FLG
Sbjct: 4 LTAKEVRNAYLDFF-KEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEM 62
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
+ + RVAN+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A EFLT
Sbjct: 63 SKWVRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLT 122
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ ++LP DRLY TYFGG GL D E + +WL+LG+ +HI MK NFWEMG TG
Sbjct: 123 QR-LALPKDRLYVTYFGGDAASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETG 181
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+H+D G S VN D D++EIWN+VFI + R S ++ L K +ID G
Sbjct: 182 PCGPCSELHFDRIG-GRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCG 240
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++QNK S YDTDLF+PL + I+ +GA PY + +D +YR+L+D+
Sbjct: 241 MGFERLVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPPYQGRVGADDVDGIDMAYRVLADH 300
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K G L + ++LGD
Sbjct: 301 ARTITIALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFATLVNTVVDLLGDA 359
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I I+ EE F +KT L G
Sbjct: 360 FPEVKKDPQHIIDIINEEELQF--------------LKT--------------LTRGRNL 391
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + + + + T I GD+A+ LYDTYG ++ Q +A K L + + +E + S
Sbjct: 392 LNRTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLKIDMDGYEAAKHNSYVLS 451
Query: 484 KAKAASNVPDIDL-------MDLKHFPVTDD--KYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ K AS + +I+L + + P T+D KYKYD D Y + ++ +V +
Sbjct: 452 QGKGASKIEEINLDVHAISQLQEQGVPPTNDTFKYKYDAVSDERDSAYNYGVCNSKIVAL 511
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+Q + SG G++ DKTN YA +GGQI D G L
Sbjct: 512 RFENQF-------VNEITSGQK-----------AGIVLDKTNFYAESGGQIYDQGA--LV 551
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E + + + + G I+H G V + KV L + +D R M+ H+ +H
Sbjct: 552 KVNDEANEFLVDRVYNRGGYILHIGVVEGTLKVGDEL--ELHIDVERRWLTMKNHSATHA 609
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN L +VL T QK V ++ DF+ ++++ V+ E+ +++ V +
Sbjct: 610 LNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKA-AMTIEQVSKTEQLTKEMVYKNVPIYA 668
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
+ + + + L + E+YPD V +I S+ S E C GTH+
Sbjct: 669 KESKLALAKKIRGLRSVFDEVYPDPVRVISFGVPVDELEQNPDSEAGEQTSVEFCGGTHL 728
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
+GHI + ++ G+R I LTG + A++
Sbjct: 729 RRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALK 765
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 76/107 (71%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG + + RVAN+QKCIR GGKHNDL G+D
Sbjct: 31 IPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKWVRVANTQKCIRAGGKHNDLDDVGKD 90
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A EFLT+ ++LP DRLY T+
Sbjct: 91 VYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTQ-RLALPKDRLYVTY 136
>gi|195473021|ref|XP_002088795.1| GE11031 [Drosophila yakuba]
gi|194174896|gb|EDW88507.1| GE11031 [Drosophila yakuba]
Length = 966
Score = 454 bits (1168), Expect = e-124, Method: Compositional matrix adjust.
Identities = 282/817 (34%), Positives = 421/817 (51%), Gaps = 85/817 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +K +R+++LD+F Q H V SS +P D ++ F N+GM QFK +FLG
Sbjct: 4 LTAKEVRNAYLDFF-KEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEM 62
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
+ + RVAN+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A EFLT
Sbjct: 63 SKWVRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLT 122
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +SLP DRLY TYFGG + GL D E + +WL+LG+ +HI MK NFWEMG TG
Sbjct: 123 QR-LSLPKDRLYVTYFGGDEASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETG 181
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+H+D G S VN D D++EIWN+VFI + R S ++ L K +ID G
Sbjct: 182 PCGPCSELHFDRIG-GRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCG 240
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++QNK S YDTDLF+PL + I+ +GA Y + +D +YR+L+D+
Sbjct: 241 MGFERLVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPAYQGRVGADDVDGIDMAYRVLADH 300
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K G L + ++LGD
Sbjct: 301 ARTITIALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFATLVNTVVDLLGDA 359
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I I+ EE F +KT L G
Sbjct: 360 FPEVKKDPQHIIDIINEEELQF--------------LKT--------------LTRGRNL 391
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + + + + T I GD+A+ LYDTYG ++ Q +A K L + + +E + S
Sbjct: 392 LNRTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLKIDMDGYEAAKHNSYVLS 451
Query: 484 KAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHY--DTNSKRYTFPCLDTNLVGI 534
+ K AS + +I+L + + P T+D +KY Y D Y + ++ +V +
Sbjct: 452 QGKGASKIEEINLDVHAISQLQEQGVPPTNDTFKYKYEAVSDERDSAYNYGVCNSKIVAL 511
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+Q + SG G++ DKTN YA +GGQI D G L
Sbjct: 512 RFENQF-------VNEITSGQK-----------AGIVLDKTNFYAESGGQIYDQGA--LV 551
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E + + + + G I+H G V + KV L + +D R M+ H+ +H
Sbjct: 552 KVNDEANEFLVDRVYNRGGYILHIGVVEGTLKVGDEL--ELHIDVERRWLTMKNHSATHA 609
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN L +VL T QK V ++ DF+ G ++++ V+ E+ +++ V +
Sbjct: 610 LNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKG-AMTIEQVSKTEQLTKEMVYKNVPIYA 668
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
+ + + + L + E+YPD V +I S+ S E C GTH+
Sbjct: 669 KESKLALAKKIRGLRSVFDEVYPDPVRVISFGVSVDELEQNPDSEAGEQTSVEFCGGTHL 728
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
+GHI + ++ G+R I LTG + A++
Sbjct: 729 RRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALK 765
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 76/107 (71%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG + + RVAN+QKCIR GGKHNDL G+D
Sbjct: 31 IPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKWVRVANTQKCIRAGGKHNDLDDVGKD 90
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A EFLT+ +SLP DRLY T+
Sbjct: 91 VYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTQ-RLSLPKDRLYVTY 136
>gi|322783659|gb|EFZ10997.1| hypothetical protein SINV_01057 [Solenopsis invicta]
Length = 952
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 289/818 (35%), Positives = 425/818 (51%), Gaps = 88/818 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
+ +K IR +++D+F ++GH V SS +P+ D S+ F N+GM QFK +FLG
Sbjct: 5 MNAKQIRQAYIDFF-KSKGHEYVHSSSTIPHDDPSLLFTNAGMNQFKPIFLGTVDPNSDM 63
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A + RV NSQKC+R GGKHNDL G+D YHHTFFEM+GNWSF DY+K++ C A EFLT
Sbjct: 64 AKWVRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICAWAWEFLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ LP DRLY TYFGG + GL D+E +D+WL LG+P H+ MK NFWEMG TG
Sbjct: 124 DV-LKLPADRLYVTYFGGDMKSGLAPDDECKDLWLSLGIPASHVLPGNMKDNFWEMGETG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+HYD G +A VN D D++EIWN+VFI + R ++ PL K +ID G
Sbjct: 183 PCGPCSELHYDRIGGREAA-HLVNMDDPDVLEIWNLVFIQYNREPDGSLKPLPKKHIDCG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LG ERL++++Q+K + YDTDLF+PL + IEK +GA PY + +D +YR+L+D+
Sbjct: 242 LGLERLISVIQDKRANYDTDLFMPLFDAIEKGTGAPPYKGKIGADDVDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K G L + E+LGDV
Sbjct: 302 ARTITIALADGGMPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFGSLVNVVVELLGDV 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ R ++ + +E +KT L G
Sbjct: 361 FPEVK--------------RDPQSIIEIINEEEIQFLKT--------------LSRGRNL 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L + +A+ S + GD+A+ LYDTYG ++ Q + K L + +E+ K +L
Sbjct: 393 LNRTIAKLESTNVVPGDVAWRLYDTYGFPIDLTQLMTEEKGLKIDMTGYEEAKKQAQLIS 452
Query: 482 RSKAKAASNVPDID---LMDLKHFPV--TDDKYKYDYHYDTNSKRYT----FPCLDTNLV 532
++KA + ++D + +L++ V TDD KYDY TN+ +Y PC
Sbjct: 453 QNKAGGVDDQINLDVHAITELQNQGVKPTDDSPKYDYKV-TNTVQYNEYDFAPC-----T 506
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
G VI A+R A+ A +D ++ VG++ D+TN YA GGQI D G +
Sbjct: 507 GTVI----------ALRRAK--AFVD--EVSSGEEVGILLDRTNFYAEQGGQIFDEG--F 550
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
L E ++ + + G ++H G V K+ G VD + R M H+ +
Sbjct: 551 LVKVDDEATEIRVKNVQVRAGYVLHIG-TVGEGKLRKGDKVHTNVDTKRRRFVMANHSAT 609
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
H LN ALR+VL T QK V D DF+ G ++ + E ++I + Q+
Sbjct: 610 HALNYALRKVLGTEADQKGSLVAPDRLRFDFTNKG-PMTTKQLLDTEVATQEMIKDNKQI 668
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGT 759
+ + + L + E YPD V ++ + + +P C GT
Sbjct: 669 YTKESSLAIAKTIQGLRAMFEETYPDPVRVVSMGVSVEKLESDPLSKAALETSVEFCGGT 728
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H+ T HI + + G+R I LTG + A+
Sbjct: 729 HLHYTAHIGDFVIASEDAIAKGIRRIVALTGPEATKAL 766
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D S+ F N+GM QFK +FLG A + RV NSQKCIR GGKHNDL G+D
Sbjct: 32 IPHDDPSLLFTNAGMNQFKPIFLGTVDPNSDMAKWVRVVNSQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEM+GNWSF DY+K++ C A EFLT + LP DRLY T+
Sbjct: 92 VYHHTFFEMMGNWSFGDYFKKEICAWAWEFLTD-VLKLPADRLYVTY 137
>gi|383858758|ref|XP_003704866.1| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase,
cytoplasmic-like [Megachile rotundata]
Length = 1206
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 293/818 (35%), Positives = 421/818 (51%), Gaps = 86/818 (10%)
Query: 10 VRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP--- 66
V + +K +R +++D+F ++GH V SS +P+ D ++ F N+GM QFK +FLG
Sbjct: 3 VTMNAKQVRQAYIDFF-KSKGHEYVHSSSTIPHDDPTLLFTNAGMNQFKPIFLGTVDPNS 61
Query: 67 --APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEF 124
A + RV NSQKC+R GGKHNDL G+D YHHTFFEM+GNWSF DY+K++ C A EF
Sbjct: 62 DMAKWVRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICTWAWEF 121
Query: 125 LTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGS 184
LT + LP DRLY TYFGG ++ L DEE + IWL LGV +HI MK NFWEMG
Sbjct: 122 LT-VKLRLPADRLYVTYFGGDEKNNLDSDEECKAIWLSLGVSPNHILPGNMKDNFWEMGE 180
Query: 185 TGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
TGPCG SEIHYD G +A VN D D++EIWN+VFI R S ++ L K +ID
Sbjct: 181 TGPCGPCSEIHYDRIGNREAA-HLVNQDDPDVLEIWNLVFIQFNRESDGSLKSLPKKHID 239
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
GLG ERLV+++QNK + YDTDLF+PL + I+K +GA PY ++ +D +YR+L+
Sbjct: 240 CGLGLERLVSVIQNKQANYDTDLFIPLFDAIQKGTGAPPYQGKVGIDDKDGIDMAYRVLA 299
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D++R IT+AL+D PD T + LR ++R A+ + + K G L + EILG
Sbjct: 300 DHARTITIALSDGGVPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFGTLVNVVVEILG 358
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
D +PE+ I + EE F +KT L G
Sbjct: 359 DTFPEVTKDPQYIIDTINEEEEQF--------------LKT--------------LSRGR 390
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNEL 479
L + +A+ S + GD+A+ LYDTYG ++ Q + K L + +E+ K +L
Sbjct: 391 NLLHRTIAKLESSNILPGDIAWRLYDTYGFPVDLTQLMTEEKGLKIDMAGYEEAKKQAQL 450
Query: 480 KERSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNS--KRYTF-PCLDTNL 531
++K + ++D+ + K T+D KY+Y N + Y F PC
Sbjct: 451 ISQNKCGGVDDQINLDVHAITELQNKGIKPTNDLPKYNYTVTGNKLYEEYEFAPC----- 505
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
G VI A+R R+ +D ++ VG++ D+TN YA GGQI D G
Sbjct: 506 TGTVI----------ALR--RNKTFVD--EVSSGEEVGILLDQTNFYAEQGGQIYDEG-- 549
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTT 651
+L T E+ +V I + G ++H G V + + VD R M HT
Sbjct: 550 FLVKTDDEDTEVRIKNVQVRGGYVLHIG-TVGQGTLKKNDKVYLNVDTTRRRFLMSNHTA 608
Query: 652 SHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ 710
+H+LN ALR+VL T QK V D DF+ G ++ + V VE+ N V+ +
Sbjct: 609 THVLNYALRKVLGTEVDQKGSLVAPDRLRFDFTNKG-AMTSEQVKRVEEITNSVVKENKK 667
Query: 711 VDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCG 758
V + + + L + E YPD V ++ I + ++P C G
Sbjct: 668 VYAKESSLALAKTIQGLRAMFEETYPDPVRIVSIGIPVEELEKDPLGPAATQTSVEFCGG 727
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
TH+ T H+E + ++ G+R I LTG + A
Sbjct: 728 THLHYTKHMEDFIIASEEAIAKGIRRIVALTGPEATKA 765
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG A + RV NSQKCIR GGKHNDL G+D
Sbjct: 32 IPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDMAKWVRVVNSQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEM+GNWSF DY+K++ C A EFLT + LP DRLY T+
Sbjct: 92 VYHHTFFEMMGNWSFGDYFKKEICTWAWEFLT-VKLRLPADRLYVTY 137
>gi|194863135|ref|XP_001970293.1| GG23450 [Drosophila erecta]
gi|190662160|gb|EDV59352.1| GG23450 [Drosophila erecta]
Length = 966
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 283/817 (34%), Positives = 420/817 (51%), Gaps = 85/817 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +K +R+++LD+F Q H V SS +P D ++ F N+GM QFK +FLG
Sbjct: 4 LTAKEVRNAYLDFF-KEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEM 62
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
+ + RVAN+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A EFLT
Sbjct: 63 SKWVRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLT 122
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K ++LP DRLY TYFGG + GL D E + +WL+LG+ +HI MK NFWEMG TG
Sbjct: 123 KR-LALPKDRLYVTYFGGDEASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETG 181
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+H+D G S VN D D++EIWN+VFI + R S ++ L K +ID G
Sbjct: 182 PCGPCSELHFDRIG-GRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCG 240
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++QNK S YDTDLF+PL + I+ +GA Y + +D +YR+L+D+
Sbjct: 241 MGFERLVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPAYQGRVGPDDVDGIDMAYRVLADH 300
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K G L + E+LGD
Sbjct: 301 ARTITIALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFATLVNTVVELLGDA 359
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I I+ EE F +KT L G
Sbjct: 360 FPEVKKDPQHIIDIINEEELQF--------------LKT--------------LTRGRNL 391
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + + + + T I GD+A+ LYDTYG ++ Q +A K L + + +E + S
Sbjct: 392 LNRTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLKIDMDGYEAAKHNSYVLS 451
Query: 484 KAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHY--DTNSKRYTFPCLDTNLVGI 534
+ K AS + +I+L + + P T+D +KY Y D Y + ++ +V +
Sbjct: 452 QGKGASKIEEINLDVHAISQLQEQGVPPTNDTFKYKYEAVSDERDSAYNYGVCNSKIVAL 511
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+Q + SG G++ DKTN YA +GGQI D G L
Sbjct: 512 RFENQF-------VNEITSGQK-----------AGIVLDKTNFYAESGGQIYDQGA--LV 551
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E + + + + G I+H G V + KV L + +D R M+ H+ +H
Sbjct: 552 KVNDEANEFLVDRVYNRGGYILHIGIVEGTLKVGDEL--ELHIDVERRWLTMKNHSATHA 609
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN L +VL T QK V ++ DF+ ++++ VA E+ +++ V +
Sbjct: 610 LNHCLLQVLGKDTDQKGSLVVPEKLRFDFNSKA-AMTIEQVAKTEQLTKEMVYKNVPIYA 668
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
+ + + + L + E+YPD V +I S+ S E C GTH+
Sbjct: 669 KESKLALAKKIRGLRSVFDEVYPDPVRVISFGVSVDDLEQNPDSEAGEQTSVEFCGGTHL 728
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
+GHI + ++ G+R I LTG + A++
Sbjct: 729 RRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALK 765
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 76/107 (71%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG + + RVAN+QKCIR GGKHNDL G+D
Sbjct: 31 IPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKWVRVANTQKCIRAGGKHNDLDDVGKD 90
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A EFLTK ++LP DRLY T+
Sbjct: 91 VYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTK-RLALPKDRLYVTY 136
>gi|354503320|ref|XP_003513729.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Cricetulus
griseus]
gi|344253408|gb|EGW09512.1| Alanyl-tRNA synthetase, cytoplasmic [Cricetulus griseus]
Length = 968
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 283/825 (34%), Positives = 419/825 (50%), Gaps = 82/825 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L ++ IR F+++F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAREIRERFINFFKKNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDARILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRETDGLLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + K TDD KY+YH D+N Y F C ++ +
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRAKGLEATDDSPKYNYHSDSNGS-YVFECTVATVLALR- 510
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 511 ------REKMFVEEVVTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + + KV G R+ +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNTQVRGGYVLHIGTIYGNLKV--GDQVRLFIDEPRRRPVMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ +N +I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKEAEEIVNAMIEAAKPVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 731 SSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKRSLS 775
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 137
>gi|344290803|ref|XP_003417126.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic [Loxodonta africana]
Length = 968
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 286/825 (34%), Positives = 418/825 (50%), Gaps = 82/825 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG ++ GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVERLYVTYFGGDEEAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGADDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNANRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLAVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDLMDL-----KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + K TDD KY+YH D+ S Y F N V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRSKGLEATDDSPKYNYHSDS-SGSYVF----ENAVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
DK + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRRDKTFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+++ + + G ++H G + + KV G R+ +D R M HT +H+L
Sbjct: 554 NSEDKTEFTVKNAQVRGGYVLHIGTIYGNLKV--GDQVRLFIDEPRRRPVMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + + E+ N +I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTEQIKEAEEISNQMIEAAKPVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFN 763
+ + L + E YPD V ++ I + + +P C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLEDPSGPAGSLTSVEFCGGTHLQN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 731 SSHAGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLS 775
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 137
>gi|195339200|ref|XP_002036208.1| GM12994 [Drosophila sechellia]
gi|194130088|gb|EDW52131.1| GM12994 [Drosophila sechellia]
Length = 966
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 288/863 (33%), Positives = 431/863 (49%), Gaps = 109/863 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +K +R++++D+F Q H V SS +P D ++ F N+GM QFK +FLG
Sbjct: 4 LTAKEVRNAYMDFF-KEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEM 62
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
+ + RVAN+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A EFLT
Sbjct: 63 SKWVRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLT 122
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ ++LP DRLY TYFGG GL D E + +WL+LG+ +HI MK NFWEMG TG
Sbjct: 123 QR-LALPKDRLYVTYFGGDAASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETG 181
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+H+D G S VN D D++EIWN+VFI + R S ++ L K +ID G
Sbjct: 182 PCGPCSELHFDRIG-GRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCG 240
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++QNK S YDTDLF+PL + I+ +GA PY + +D +YR+L+D+
Sbjct: 241 MGFERLVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPPYQGRVGADDVDGIDMAYRVLADH 300
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K G L + ++LGD
Sbjct: 301 ARTITIALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFATLVNTVVDLLGDA 359
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I I+ EE F +KT L G
Sbjct: 360 FPEVKKDPQHIIDIINEEELQF--------------LKT--------------LTRGRNL 391
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + + + + T I GD+A+ LYDTYG ++ Q +A K L + + +E + S
Sbjct: 392 LNRTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLKIDMDGYEAAKHNSYVLS 451
Query: 484 KAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHY--DTNSKRYTFPCLDTNLVGI 534
+ K AS + +I+L + + P T+D +KY Y D Y + + +V +
Sbjct: 452 QGKGASKIEEINLDVHAISQLQEQGVPPTNDTFKYKYEAVSDERDSAYNYGVCSSKIVAL 511
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+Q + SG G++ DKTN YA +GGQI D G L
Sbjct: 512 RFENQF-------VNEITSGQK-----------AGIVLDKTNFYAESGGQIYDQGA--LV 551
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E + + + + G I+H G V + KV L + +D R M+ H+ +H
Sbjct: 552 KVNDEANEFLVDRVYNRGGYILHIGVVEGTLKVGDEL--ELHIDVERRWLTMKNHSATHA 609
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN L +VL T QK V ++ DF+ ++++ V+ E+ +++ V +
Sbjct: 610 LNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKA-AMTIEQVSKTEQLTKEMVYKNVPIYA 668
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
+ + + + L + E+YPD V +I S+ S E C GTH+
Sbjct: 669 KESKLALAKKIRGLRSVFDEVYPDPVRVISFGVSVDELEQNPDSEAGEQTSVEFCGGTHL 728
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS-----------------KAAVENGK--- 801
+GHI + ++ G+R I LTG + KA +EN K
Sbjct: 729 RRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALQKSETFEQEIVRLKATIENDKSGK 788
Query: 802 ----HLSTAASFSQILNVGNIPY 820
H+ ++ ++ IPY
Sbjct: 789 DSKSHVKEIVELTEQISHATIPY 811
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 76/107 (71%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG + + RVAN+QKCIR GGKHNDL G+D
Sbjct: 31 IPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKWVRVANTQKCIRAGGKHNDLDDVGKD 90
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A EFLT+ ++LP DRLY T+
Sbjct: 91 VYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTQ-RLALPKDRLYVTY 136
>gi|24582809|ref|NP_523511.2| Alanyl-tRNA synthetase, isoform A [Drosophila melanogaster]
gi|45552267|ref|NP_995656.1| Alanyl-tRNA synthetase, isoform B [Drosophila melanogaster]
gi|75027177|sp|Q9VLM8.1|SYAC_DROME RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|7297398|gb|AAF52657.1| Alanyl-tRNA synthetase, isoform A [Drosophila melanogaster]
gi|45445248|gb|AAS64737.1| Alanyl-tRNA synthetase, isoform B [Drosophila melanogaster]
Length = 966
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 282/817 (34%), Positives = 421/817 (51%), Gaps = 85/817 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +K +R+++LD+F Q H V SS +P D ++ F N+GM QFK +FLG
Sbjct: 4 LTAKEVRNAYLDFF-KEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEM 62
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
+ + RVAN+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A EFLT
Sbjct: 63 SKWVRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLT 122
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ ++LP DRLY TYFGG GL D E + +WL+LG+ +HI MK NFWEMG TG
Sbjct: 123 QR-LALPKDRLYVTYFGGDAASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETG 181
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+H+D G S VN D D++EIWN+VFI + R S ++ L K +ID G
Sbjct: 182 PCGPCSELHFDRIG-GRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCG 240
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++QNK S YDTDLF+PL + I+ +GA PY + +D +YR+L+D+
Sbjct: 241 MGFERLVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPPYQGRVGADDVDGIDMAYRVLADH 300
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K G L + ++LGD
Sbjct: 301 ARTITIALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFATLVNTVVDLLGDA 359
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I I+ EE F +KT L G
Sbjct: 360 FPEVKKDPQHIIDIINEEELQF--------------LKT--------------LTRGRNL 391
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + + + + T I GD+A+ LYDTYG ++ Q +A K L + + +E + S
Sbjct: 392 LNRTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLKIDMDGYEAAKHNSYVLS 451
Query: 484 KAKAASNVPDIDL-------MDLKHFPVTDD--KYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ K AS + +I+L + + P T+D KYKY+ D Y + ++ +V +
Sbjct: 452 QGKGASKIEEINLDVHAISQLQEQGVPPTNDTFKYKYEAVSDERDSAYNYGVCNSKIVAL 511
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+Q + SG G++ DKTN YA +GGQI D G L
Sbjct: 512 RFENQF-------VNEITSGQK-----------AGIVLDKTNFYAESGGQIYDQGA--LV 551
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E + + + + G I+H G V + KV L + +D R M+ H+ +H
Sbjct: 552 KVNDEANEFLVDRVYNRGGYILHIGVVEGTLKVGDEL--ELHIDVERRWLTMKNHSATHA 609
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN L +VL T QK V ++ DF+ ++++ V+ E+ +++ V +
Sbjct: 610 LNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKA-AMTIEQVSKTEQLTKEMVYKNVPIYA 668
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
+ + + + L + E+YPD V +I S+ S E C GTH+
Sbjct: 669 KESKLALAKKIRGLRSVFDEVYPDPVRVISFGVPVDELEQNPDSEAGEQTSVEFCGGTHL 728
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
+GHI + ++ G+R I LTG + A++
Sbjct: 729 RRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALK 765
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 76/107 (71%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG + + RVAN+QKCIR GGKHNDL G+D
Sbjct: 31 IPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKWVRVANTQKCIRAGGKHNDLDDVGKD 90
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A EFLT+ ++LP DRLY T+
Sbjct: 91 VYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTQ-RLALPKDRLYVTY 136
>gi|170039921|ref|XP_001847766.1| alanyl-tRNA synthetase [Culex quinquefasciatus]
gi|167863508|gb|EDS26891.1| alanyl-tRNA synthetase [Culex quinquefasciatus]
Length = 967
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 289/818 (35%), Positives = 428/818 (52%), Gaps = 87/818 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +K IR+ FLD+F + H V SS +P D ++ F N+GM QFK +FLG
Sbjct: 5 LTAKQIRNIFLDFFKEKE-HLYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEM 63
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
+ + R AN+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A E LT
Sbjct: 64 SKWVRTANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICTWAWELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ LP DRLY TYFGG + GL D E RDIWL+LGV +HI MK NFWEMG TG
Sbjct: 124 DR-LKLPSDRLYVTYFGGHPESGLEPDLECRDIWLKLGVKEEHILPGSMKDNFWEMGETG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+H+D G S VN D D++EIWN+VFI R ++ L K +ID G
Sbjct: 183 PCGPCSELHFDRIG-GRSVPELVNMDDPDVLEIWNLVFIQFNREQDGSLKLLPKKHIDCG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G+ERLV+++Q+K S YDTD+F+PL + I+K +GA Y + +D +YR+L+D+
Sbjct: 242 MGYERLVSVIQDKRSNYDTDVFVPLFQAIQKGTGAPDYQGRVGAEDVDGVDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD FPD T + LR ++R A+ + + K G L + E+LGD
Sbjct: 302 ARTITIALADGGFPDNTGRGYVLRRILRRAVRYASEKLNGKPG-FFATLVDTVVELLGDT 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I+ I+ EE + F +KT L G
Sbjct: 361 FPEVKKDPQHIKNIINEEEQQF--------------LKT--------------LSRGRNL 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + +A+ I GD+A+ LYDTYG ++ +A K +T+ E +E+ ++ S
Sbjct: 393 LNRTIAKLGDSKVIPGDVAWRLYDTYGFPVDLTGLMAEEKNMTIDMEGYEKAKHQSYIIS 452
Query: 484 KAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNS--KRYTF-PCLDTNLVG 533
+ K S +DL + K P T+D +KY Y ++ Y F PC G
Sbjct: 453 QGKEKSKTATVDLDVHAISELQEKKVPTTNDTFKYHYKAESTDPLAAYVFEPC-----TG 507
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
V+ A+R+ + A +D +Q V I DKTN YA +GGQI D G YL
Sbjct: 508 KVL----------ALRY--NNAFVDEVQAGQECAV--ILDKTNFYAESGGQIYDQG--YL 551
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
E+ + + + + G ++H G V +V + ++V R +L M+ H+ +H
Sbjct: 552 LKVNDESTEFNVNLVYNRGGYVLHIGVVEGVLRVGDEVACHMDV-VRRQL-TMKNHSATH 609
Query: 654 LLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
LN +L +VL T Q+ V ++ DF+ ++++ VA E+ +V+ +QV
Sbjct: 610 ALNHSLLKVLGLDTDQRGSLVVPEKLRFDFTNKA-AMTIEQVAEAERLTREVVKKNMQVY 668
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKENV----ISREPCCGTH 760
+ + + + L + E+YPD V +I ++ E V S E C GTH
Sbjct: 669 AKESKLASAKAIKGLRSVFDEVYPDPVRVISFGVPVEDLEANPEGVAGTETSVEFCGGTH 728
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
+ +GH+ + ++ G+R I LTG + A++
Sbjct: 729 LHQSGHMVDFVITTEEAIAKGIRRIVALTGPEAIKALK 766
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG + + R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKWVRTANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A E LT + LP DRLY T+
Sbjct: 92 VYHHTFFEMLGNWSFGDYFKKEICTWAWELLTD-RLKLPSDRLYVTY 137
>gi|81871231|sp|Q8CFX8.1|SYAC_MESAU RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|26522952|dbj|BAC44844.1| alanyl trna synthetase [Mesocricetus auratus]
Length = 968
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 283/828 (34%), Positives = 421/828 (50%), Gaps = 82/828 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L ++ IR F+++F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAREIRERFINFFRRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPL 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ ++P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FAIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDAKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRETDGLLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + K TDD KY+YH D+ S Y F C ++ +
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRAKGLEATDDSPKYNYHSDS-SGAYVFECTVATVLALR- 510
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 511 ------REKMFVEEVVTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + + KV G R+ +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGNLKV--GDQVRLFIDEPRRRPVMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ +N +I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKEAEEIVNAMIEAAKPVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLQN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQ 811
+ H + ++ ++ G+R I +TG ++ A+ + L + S +
Sbjct: 731 SSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLRRSLSIME 778
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ ++P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFAIPVERLYVTY 137
>gi|410983936|ref|XP_003998291.1| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase, cytoplasmic
[Felis catus]
Length = 968
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 286/825 (34%), Positives = 418/825 (50%), Gaps = 82/825 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDSKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGADDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDLMDL-----KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K A ++ +D+ + K TDD KY+YH D+ S Y F + V V+
Sbjct: 453 QGKGAGAEDLIMLDIYAIEELREKGLEATDDSPKYNYHSDS-SGSYAF----ESAVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
DK + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRRDKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVED 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + S +V G R+ +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGSLRV--GDQVRLFIDEPRRRPIMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL Q+ V D DF+ G +S + E+ N +I V +
Sbjct: 612 NFALRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTQQIKEAEEIANGMIEAAKPVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLQN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 731 SSHAGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLS 775
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 137
>gi|26336489|dbj|BAC31927.1| unnamed protein product [Mus musculus]
Length = 968
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 287/826 (34%), Positives = 420/826 (50%), Gaps = 84/826 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L ++ IR F+++F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAREIRERFINFFRRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E R IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVERLYVTYFGGDEAAGLEPDLECRQIWQNLGLDEARILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R S + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRESDGVLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFMPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L +++ I GD A+ LYDTYG ++ +A K L + FE++ + +S
Sbjct: 393 LDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMNGFEEERRLAQLKS 452
Query: 484 KAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ K A + D+ ++D+ K TDD KY+Y D+ S Y F C V V
Sbjct: 453 QGKGAGD-EDLIMLDIYAIEELRAKGLEATDDSPKYNYQSDS-SGSYVFEC----TVATV 506
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLT 594
+ A+R R +D + G++ DKT YA GGQI D G + +
Sbjct: 507 L----------ALR--REKMFVDEVVTGQEC--GVVLDKTCFYAEQGGQIYDEGYLVKVD 552
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+++++ + + G ++H G + + KV G R+ +D R M HT +H+
Sbjct: 553 DSSEDKTEFTVKNAQVRGGYVLHIGTIYGNLKV--GDQVRLFIDEPRRRPVMSNHTATHI 610
Query: 655 LNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
LN ALR VL QK V D DF+ G +S + E+ +N +I V +
Sbjct: 611 LNFALRSVLGEADQKGSLVTPDRLRFDFTAKG-AMSTQQIKKAEEIVNGMIEAAKPVYTQ 669
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVF 762
+ + L + E YPD V ++ I ++ S E C GTH+
Sbjct: 670 DCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPCGPAGSLTSVEFCGGTHLR 729
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
N+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 730 NSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLKKSLS 775
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 137
>gi|148679537|gb|EDL11484.1| alanyl-tRNA synthetase, isoform CRA_a [Mus musculus]
Length = 1055
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 287/826 (34%), Positives = 419/826 (50%), Gaps = 84/826 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L ++ IR F+++F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 92 LTAREIRERFINFFRRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 150
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 151 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 210
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E R IW LG+ I MK NFWEMG TG
Sbjct: 211 QE-FGIPVERLYVTYFGGDEAAGLEPDLECRQIWQNLGLDEARILPGNMKDNFWEMGDTG 269
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R S + PL K IDTG
Sbjct: 270 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRESDGVLKPLPKKSIDTG 328
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 329 MGLERLVSVLQNKMSNYDTDLFMPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 388
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 389 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 447
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ ++ I+ EE F +KT L G +
Sbjct: 448 FPELKKDPEMVKDIINEEEVQF--------------LKT--------------LSRGRRI 479
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L +++ I GD A+ LYDTYG ++ +A K L + FE++ + +S
Sbjct: 480 LDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMNGFEEERRLAQLKS 539
Query: 484 KAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ K A + D+ ++D+ K TDD KY+Y D+ S Y F C V V
Sbjct: 540 QGKGAGD-EDLIMLDIYAIEELRAKGLEATDDSPKYNYQSDS-SGSYVFEC----TVATV 593
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLT 594
+ A+R R +D + G++ DKT YA GGQI D G + +
Sbjct: 594 L----------ALR--REKMFVDEVVTGQEC--GVVLDKTCFYAEQGGQIYDEGYLVKVD 639
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+++++ + + G ++H G + + KV G R+ +D R M HT +H+
Sbjct: 640 DSSEDKTEFTVKNAQVRGGYVLHIGTIYGNLKV--GDQVRLFIDEPRRRPVMSNHTATHI 697
Query: 655 LNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
LN ALR VL QK V D DF+ G +S + E+ +N +I V +
Sbjct: 698 LNFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIVNGMIEAAKPVYTQ 756
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVF 762
+ + L + E YPD V ++ I ++ S E C GTH+
Sbjct: 757 DCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPCGPAGSLTSVEFCGGTHLR 816
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
N+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 817 NSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLKKSLS 862
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 74/109 (67%), Gaps = 6/109 (5%)
Query: 816 GNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAG 870
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G
Sbjct: 117 ATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVG 176
Query: 871 RDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+D YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 177 KDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 224
>gi|351701755|gb|EHB04674.1| Alanyl-tRNA synthetase, cytoplasmic [Heterocephalus glaber]
Length = 983
Score = 451 bits (1160), Expect = e-123, Method: Compositional matrix adjust.
Identities = 289/830 (34%), Positives = 423/830 (50%), Gaps = 86/830 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRERFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPL 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKESACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P+DRLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVDRLYVTYFGGDEAAGLEPDLECKQIWQTLGLDDSRILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
PCG SEIHYD + G +S L VN D +++EIWN+VFI + R + T+ PL K IDT
Sbjct: 183 PCGPCSEIHYDRIGGRDASYL--VNQDDPNVLEIWNLVFIQYNRETDGTLKPLPKKSIDT 240
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D
Sbjct: 241 GMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLAD 300
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
++R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 301 HARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGD 359
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 360 AFPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRR 391
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELK 480
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 392 ILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLK 451
Query: 481 ERSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ K ++ +D+ + + TDD KY+YH D+ S Y F + V V
Sbjct: 452 SQGKGAGGEDLIMLDIYAIEELRARGLEATDDSPKYNYHSDS-SGGYLF----ESAVATV 506
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLT 594
+ +K + +G G++ DKT YA GGQI D G + +
Sbjct: 507 L---ALRREKMFVEEVSTGQE-----------CGVLLDKTCFYAEQGGQIYDEGYLVKVD 552
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+++++ + + G ++H G + + KV G R+ +D R M HT +H+
Sbjct: 553 DSSEDKTEFTVKNAQVRGGYVLHIGTIYGNLKV--GDQVRLFIDEPRRRPIMSNHTATHI 610
Query: 655 LNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
LN ALR VL QK V D DF+ G +S + E+ N++I V +
Sbjct: 611 LNFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEETGNEMIKAAKPVYTQ 669
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVF 762
+ + L + E YPD V ++ I ++ S E C GTH+
Sbjct: 670 DCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLR 729
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQI 812
N+ H + ++ ++ G+R I +TG ++ A+ + L SFS +
Sbjct: 730 NSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKK--SFSTM 777
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P+DRLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKESACKMALELLTQ-EFGIPVDRLYVTY 137
>gi|126305114|ref|XP_001362507.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic [Monodelphis
domestica]
Length = 968
Score = 451 bits (1159), Expect = e-123, Method: Compositional matrix adjust.
Identities = 292/827 (35%), Positives = 420/827 (50%), Gaps = 86/827 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F Q HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRRRFIDFFKRNQ-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPAHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLNRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P+DRLY TYFGG++ GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVDRLYVTYFGGNEAAGLEPDLECKQIWQNLGLDDSKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G+ +A VN D +++EIWN+VFI R + ++ PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGDRDAA-HLVNQDDPNVLEIWNLVFIQFNREADGSLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+ Y + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARQYTGCVGADDVDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + K+G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNAKRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPEMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAAS-----NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ I+ + +K VTDD KY+Y D+ S Y F N V V
Sbjct: 453 QGKGAGGEDHIMLDIYAIEELRIKGLQVTDDSLKYNYQSDS-SGTYEF----ENPVATV- 506
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT-- 594
A+R R +D + G++ DKT YA GGQI D G YL
Sbjct: 507 ---------KALR--REKMFVDEVSTGQEC--GVVLDKTCFYAEQGGQIYDEG--YLVKE 551
Query: 595 -NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
+++++ + + + G ++H G V S +V G R+ +D R M HT +H
Sbjct: 552 DDSSEDKTEFTVKDAQVRGGYVLHIGTVYGSLRV--GDRVRLYIDEPRRRPVMSNHTATH 609
Query: 654 LLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
+LN ALR VL Q+ V D DF+ G +S + E N +IA V
Sbjct: 610 ILNFALRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTQQLRETETIANGMIAAAKPVYA 668
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
+ + + L + E YPD V ++ I ++ S E C GTH+
Sbjct: 669 QDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGIPVAKLLDDPSGPAGSLTSVEFCGGTHL 728
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
N+ H + ++ ++ G+R + +TG ++ A+ L ++ S
Sbjct: 729 QNSSHAGALVIVSEEAIAKGIRRVVAVTGVEAQKALRKADSLKSSLS 775
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPAHPMAKLNRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P+DRLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVDRLYVTY 137
>gi|34610207|ref|NP_666329.2| alanine--tRNA ligase, cytoplasmic [Mus musculus]
gi|47117019|sp|Q8BGQ7.1|SYAC_MOUSE RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|23270912|gb|AAH33273.1| Alanyl-tRNA synthetase [Mus musculus]
gi|26351767|dbj|BAC39520.1| unnamed protein product [Mus musculus]
gi|148679538|gb|EDL11485.1| alanyl-tRNA synthetase, isoform CRA_b [Mus musculus]
Length = 968
Score = 451 bits (1159), Expect = e-123, Method: Compositional matrix adjust.
Identities = 287/826 (34%), Positives = 419/826 (50%), Gaps = 84/826 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L ++ IR F+++F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAREIRERFINFFRRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E R IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVERLYVTYFGGDEAAGLEPDLECRQIWQNLGLDEARILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R S + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRESDGVLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFMPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPEMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L +++ I GD A+ LYDTYG ++ +A K L + FE++ + +S
Sbjct: 393 LDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMNGFEEERRLAQLKS 452
Query: 484 KAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ K A + D+ ++D+ K TDD KY+Y D+ S Y F C V V
Sbjct: 453 QGKGAGD-EDLIMLDIYAIEELRAKGLEATDDSPKYNYQSDS-SGSYVFEC----TVATV 506
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLT 594
+ A+R R +D + G++ DKT YA GGQI D G + +
Sbjct: 507 L----------ALR--REKMFVDEVVTGQEC--GVVLDKTCFYAEQGGQIYDEGYLVKVD 552
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+++++ + + G ++H G + + KV G R+ +D R M HT +H+
Sbjct: 553 DSSEDKTEFTVKNAQVRGGYVLHIGTIYGNLKV--GDQVRLFIDEPRRRPVMSNHTATHI 610
Query: 655 LNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
LN ALR VL QK V D DF+ G +S + E+ +N +I V +
Sbjct: 611 LNFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIVNGMIEAAKPVYTQ 669
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVF 762
+ + L + E YPD V ++ I ++ S E C GTH+
Sbjct: 670 DCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPCGPAGSLTSVEFCGGTHLR 729
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
N+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 730 NSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLKKSLS 775
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 137
>gi|37903407|gb|AAP57355.1| Alanyl-tRNA synthase [Mus musculus]
Length = 968
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 287/826 (34%), Positives = 419/826 (50%), Gaps = 84/826 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L ++ IR F+++F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAREIRERFINFFRRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E R IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVERLYVTYFGGDEAAGLEPDLECRQIWQNLGLDEARILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R S + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRESDGVLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFMPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPEMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L +++ I GD A+ LYDTYG ++ +A K L + FE++ + +S
Sbjct: 393 LDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMNGFEEERRLAQLKS 452
Query: 484 KAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ K A + D+ ++D+ K TDD KY+Y D+ S Y F C V V
Sbjct: 453 QGKGAGD-EDLIMLDIYAIEELRAKGLEATDDSPKYNYQSDS-SGSYVFEC----TVATV 506
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLT 594
+ A+R R +D + G++ DKT YA GGQI D G + +
Sbjct: 507 L----------ALR--REKMFVDEVVTGQEC--GVVLDKTCFYAEQGGQIYDEGYLVKVD 552
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+++++ + + G ++H G + + KV G R+ +D R M HT +H+
Sbjct: 553 DSSEDKTEFTVKNAQVRGGYVLHIGTIYGNLKV--GDQVRLFIDEPRRRPVMSNHTATHI 610
Query: 655 LNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
LN ALR VL QK V D DF+ G +S + E+ +N +I V +
Sbjct: 611 LNFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIVNGMIEAAKPVYTQ 669
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVF 762
+ + L + E YPD V ++ I ++ S E C GTH+
Sbjct: 670 DCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPCGPAGSLTSVEFCGGTHLR 729
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
N+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 730 NSSHEGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLKKSLS 775
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 137
>gi|281350877|gb|EFB26461.1| hypothetical protein PANDA_021488 [Ailuropoda melanoleuca]
Length = 976
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 287/828 (34%), Positives = 417/828 (50%), Gaps = 82/828 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFRRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +PL+RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPLERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R S + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRESDGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYSGKVGADDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDLMDL-----KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + K TDD KY+YH D+ S Y F + V V+
Sbjct: 453 QGKGAGGDDLIMLDIYAIEELREKGLEATDDSPKYNYHSDS-SGSYAF----ESTVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
DK + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRRDKMFVEEVCTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVED 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+++ + + G ++H G + S +V G R+ +D R M HT +H+L
Sbjct: 554 NSEDKTEFTVKNAQVRGGYVLHIGTIYGSLRV--GDQVRLFIDEPRRRPVMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL Q+ V D DF+ G +S + E+ N +I V +
Sbjct: 612 NFALRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANGMIEAAKPVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLQN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQ 811
+ H + ++ ++ G+R I +TG ++ A+ + L + S +
Sbjct: 731 SSHAGAFVLVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKNSLSIME 778
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +PL+RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPLERLYVTY 137
>gi|149699352|ref|XP_001501062.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic [Equus caballus]
Length = 968
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 284/825 (34%), Positives = 418/825 (50%), Gaps = 82/825 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRETDGVLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYAGKVGADDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGESKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDLMDL-----KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + K TDD KY+Y+ D+ S Y F + V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELREKGLEATDDSPKYNYYSDS-SGSYVF----ESAVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
DK + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRRDKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + + KV G R+ +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGNLKV--GDQVRLFIDEPRRRPVMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL Q+ V D DF+ G +S + E+ N++I V +
Sbjct: 612 NFALRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKPVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CSLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLQN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 731 SSHAGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLS 775
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIERLYVTY 137
>gi|355666148|gb|AER93439.1| alanyl-tRNA synthetase [Mustela putorius furo]
Length = 841
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 287/825 (34%), Positives = 416/825 (50%), Gaps = 82/825 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDSKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R S + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRESDGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYSGKVGADDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDLMDL-----KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + K TDD KY+YH D+ S Y F + V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELREKGLEATDDSPKYNYHSDS-SGSYAF----ESAVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
DK + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRRDKMFVEEVCTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVED 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+++ + + G ++H G V S +V G R+ +D R M HT +H+L
Sbjct: 554 NSEDKTEFTVKNAQVRGGYVLHIGTVYGSLRV--GDQVRLFIDEPRRRPIMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL Q+ V D DF+ G +S + E+ N +I V +
Sbjct: 612 NFALRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANQMIEAAKPVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSIEFCGGTHLRN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 731 SSHAGTFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKNSLS 775
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 137
>gi|301791808|ref|XP_002930871.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Ailuropoda
melanoleuca]
Length = 968
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 287/828 (34%), Positives = 417/828 (50%), Gaps = 82/828 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFRRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +PL+RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPLERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R S + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRESDGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYSGKVGADDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDLMDL-----KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + K TDD KY+YH D+ S Y F + V V+
Sbjct: 453 QGKGAGGDDLIMLDIYAIEELREKGLEATDDSPKYNYHSDS-SGSYAF----ESTVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
DK + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRRDKMFVEEVCTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVED 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+++ + + G ++H G + S +V G R+ +D R M HT +H+L
Sbjct: 554 NSEDKTEFTVKNAQVRGGYVLHIGTIYGSLRV--GDQVRLFIDEPRRRPVMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL Q+ V D DF+ G +S + E+ N +I V +
Sbjct: 612 NFALRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANGMIEAAKPVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLQN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQ 811
+ H + ++ ++ G+R I +TG ++ A+ + L + S +
Sbjct: 731 SSHAGAFVLVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKNSLSIME 778
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +PL+RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPLERLYVTY 137
>gi|224064089|ref|XP_002186563.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Taeniopygia guttata]
Length = 968
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 291/816 (35%), Positives = 414/816 (50%), Gaps = 86/816 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASQIRQRFIDFFRENK-HTYVHSSSTIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPL 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R N+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC++ALE LT
Sbjct: 64 AKLSRATNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKLALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K +P +RLY TYFGG++ GL D E + IWL+LG+ I MK NFWEMG TG
Sbjct: 124 KE-FGIPAERLYVTYFGGNEAAGLQPDLECKQIWLDLGLAEGRILPGSMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G+ A VN D +++EIWN+VFI R + T+ PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGD-RDASHLVNQDDPNVLEIWNLVFIQFNREADGTLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLFLP E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFLPYFEAIQKGTGARPYLGQVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+AL+D PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITLALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLNAPKG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEDQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L +++ I GD A+ LYDTYG ++ +A K L + E FE++ + +S
Sbjct: 393 LDRKIQSLGDSKVIPGDTAWLLYDTYGFPADLTGLIAEEKGLVVDMEGFEEERKNAQLKS 452
Query: 484 KAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ K A D+ ++D+ + VTDD KY+Y D S Y F +LV V
Sbjct: 453 QGKGAGG-EDLLMLDIYAIEELRAQGLEVTDDSPKYNYASDL-SGTYDF----GSLVATV 506
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
AIR + S E G++ D+T YA GGQI D G +
Sbjct: 507 ----------KAIRREKKFVEEVSTGQE----CGIVLDRTCFYAEQGGQIYDQGYMVKDD 552
Query: 596 TTQENGKVE--IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
++E+ K E + + G ++H G + S KV G + +D R M HT +H
Sbjct: 553 DSRED-KTEFTVKNVQVRGGYVLHIGTLYGSLKV--GDQVHLTIDEARRRPVMSNHTATH 609
Query: 654 LLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
+LN ALR VL Q+ V D DF+ G LS + VE N +I V
Sbjct: 610 ILNFALRSVLGEADQRGSLVAPDRLRFDFTAKG-ALSTQEIKKVEGIANQMIEESKTVYA 668
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
+ +E + L + E YPD V ++ I ++ S E C GTH+
Sbjct: 669 KDCPLAEAKAIQGLRAVFDETYPDPVRVVSIGIPVEELLADPSGPGGSITSIEFCGGTHL 728
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
N+ H S ++ ++ G+R I +TG ++ A+
Sbjct: 729 QNSSHAGSFVIVSEEAIAKGIRRIVAVTGAEARKAL 764
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R N+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKLSRATNTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC++ALE LTK +P +RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKLALELLTK-EFGIPAERLYVTY 137
>gi|74213943|dbj|BAE29394.1| unnamed protein product [Mus musculus]
Length = 968
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 286/826 (34%), Positives = 419/826 (50%), Gaps = 84/826 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L ++ IR F+++F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAREIRERFINFFRRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E R IW LG+ I M+ NFWEMG TG
Sbjct: 124 QE-FGIPVERLYVTYFGGDEAAGLEPDLECRQIWQNLGLDEARILPGNMRDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R S + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRESDGVLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFMPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPEMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L +++ I GD A+ LYDTYG ++ +A K L + FE++ + +S
Sbjct: 393 LDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMNGFEEERRLAQLKS 452
Query: 484 KAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ K A + D+ ++D+ K TDD KY+Y D+ S Y F C V V
Sbjct: 453 QGKGAGD-EDLIMLDIYAIEELRAKGLEATDDSPKYNYQSDS-SGSYVFEC----TVATV 506
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLT 594
+ A+R R +D + G++ DKT YA GGQI D G + +
Sbjct: 507 L----------ALR--REKMFVDEVVTGQEC--GVVLDKTCFYAEQGGQIYDEGYLVKVD 552
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+++++ + + G ++H G + + KV G R+ +D R M HT +H+
Sbjct: 553 DSSEDKTEFTVKNAQVRGGYVLHIGTIYGNLKV--GDQVRLFIDEPRRRPVMSNHTATHI 610
Query: 655 LNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
LN ALR VL QK V D DF+ G +S + E+ +N +I V +
Sbjct: 611 LNFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIVNGMIEAAKPVYTQ 669
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVF 762
+ + L + E YPD V ++ I ++ S E C GTH+
Sbjct: 670 DCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPCGPAGSLTSVEFCGGTHLR 729
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
N+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 730 NSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLKKSLS 775
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 137
>gi|149640708|ref|XP_001506178.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic isoform 1
[Ornithorhynchus anatinus]
Length = 968
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 291/827 (35%), Positives = 420/827 (50%), Gaps = 86/827 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LSASEIRQRFIDFFKRNR-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG++ GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYFGGNEAAGLDPDLECKQIWQNLGLDDSKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI R + ++ PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQFNREADGSLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYMGQVGADDTDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASKG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPEMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDGKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + + VTDD KY+Y + S Y F + V V
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRARDLEVTDDSPKYNYRANA-SGSYEF----ESPVATV- 506
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT-- 594
A+R R +D + G++ DKT YA GGQI D G YL
Sbjct: 507 ---------KALR--REKTFVDEVSTGQE--CGVVLDKTCFYAEQGGQIFDEG--YLVKD 551
Query: 595 -NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
+ +++ + + + G ++H G V + KV G R+ +D R M HT +H
Sbjct: 552 DDGSEDKTEFTVKNVQVRGGYVLHIGTVYGNLKV--GDQVRLFIDEPRRRPVMSNHTATH 609
Query: 654 LLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
+LN ALR VL Q+ V D DF+ G +S + E+ N +I V
Sbjct: 610 ILNFALRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTQEIKKTEEIANGMIQAAKPVYA 668
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
+ + + L + E YPD V ++ I S ++ S E C GTH+
Sbjct: 669 QDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVAELLEDPSSPAGSLTSVEFCGGTHL 728
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
N+GH + ++ ++ G+R I +TG ++ A+ + L TA S
Sbjct: 729 RNSGHAGAFVIVSEEAIAKGIRRIVAVTGTEAQKALRKAESLKTALS 775
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIERLYVTY 137
>gi|402912107|ref|XP_003918629.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Papio anubis]
Length = 968
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 285/825 (34%), Positives = 417/825 (50%), Gaps = 82/825 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRLRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDSKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ + + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + + VTDD KY+YH D S Y F N V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRARGLEVTDDSPKYNYHLDF-SGSYVF----ENTVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + KV G R+ +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGDLKV--GDQVRLFIDEPRRRPIMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ N++I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKPVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 731 SSHAGAFVIVTEEAIAKGIRRIVAVTGTEAQKALRKAESLKKSLS 775
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIERLYVTY 137
>gi|195438477|ref|XP_002067163.1| GK24844 [Drosophila willistoni]
gi|194163248|gb|EDW78149.1| GK24844 [Drosophila willistoni]
Length = 967
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 277/822 (33%), Positives = 419/822 (50%), Gaps = 84/822 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
+ +K +R ++L +F + H V SS +P D ++ F N+GM QFK +FLG+
Sbjct: 4 MTAKMVRDAYLGFF-KEKKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGIADPNSEM 62
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
+ + RVAN+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A EFLT
Sbjct: 63 SKWVRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICTWAWEFLT 122
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ LP DRLY TYFGG + GL D E + +WL+LG+ +H+ MK NFWEMG TG
Sbjct: 123 DR-LKLPKDRLYVTYFGGDEASGLEPDLECKQLWLDLGIKPEHVLPGSMKDNFWEMGETG 181
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+H+D G S VN D D++EIWN+VFI + R S ++ PL K +ID G
Sbjct: 182 PCGPCSELHFDRIG-GRSVPELVNQDDPDVLEIWNLVFIQYNRESDGSLKPLPKKHIDCG 240
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++QNK S YDTDLF PL E I+ +GA Y + +D +YR+L+D+
Sbjct: 241 MGFERLVSVIQNKRSNYDTDLFQPLFEHIQSSTGAPAYQGRVGADDSDGIDMAYRVLADH 300
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K K G + L + E+LGD
Sbjct: 301 ARTITIALADGGTPDNTGRGYVLRRILRRAVRYATEKLKAKPG-MFASLVNTVVELLGDA 359
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I I+ EE + F K L + + L +
Sbjct: 360 FPEVKKDPQHIIDIINEEEQQF----------LKTLTRGRNLLNR--------------- 394
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
++L D I I GD+A+ LYDTYG ++ Q +A K L + +E S
Sbjct: 395 TIEKLGADQKI--IPGDVAWRLYDTYGFPVDLTQLMAEEKSLEIDMAGYEAAKQNSYILS 452
Query: 484 KAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNSKR--YTFPCLDTNLVGI 534
+ K +S + +I+L + + P T+D +KY Y ++ + Y + + ++ I
Sbjct: 453 QGKGSSKIEEINLDVHAISQLQDQGVPTTNDSFKYKYEAESEERDSPYNYETCSSKILAI 512
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+Q + SI A G++ D TN YA +GGQI D G L
Sbjct: 513 RFENQF----------------VQSISNGQKA--GIVLDNTNFYAESGGQIYDQGA--LV 552
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E + + + + G I+H G V + V L ++ +D R M+ H+ +H
Sbjct: 553 KANDEANEFLVDRVYNRGGYILHIGVVEGTLAVGDDL--QLHIDVTRRWLTMKNHSATHA 610
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN L +VL T QK V ++ DF+ G ++++ VA E+ ++ V +
Sbjct: 611 LNHCLLQVLGKDTEQKGSLVVPEKLRFDFNTKG-AMTIEQVAKTEELTRQMVYKNVPIYA 669
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHV 761
+ + + + L + E+YPD V +I + +P C GTH+
Sbjct: 670 KESKLAVAKSIRGLRSVFDEVYPDPVRVISFGVPVEQLEEQPNGEAGDNTSVEFCGGTHL 729
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+GHI + ++ G+R I LTG + A++ +
Sbjct: 730 RRSGHIMDFVISSEEAIAKGIRRIVALTGPEAIKAIKKSEQF 771
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG+ + + RVAN+QKCIR GGKHNDL G+D
Sbjct: 31 IPLDDPTLLFANAGMNQFKPIFLGIADPNSEMSKWVRVANTQKCIRAGGKHNDLDDVGKD 90
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A EFLT + LP DRLY T+
Sbjct: 91 VYHHTFFEMLGNWSFGDYFKKEICTWAWEFLTD-RLKLPKDRLYVTY 136
>gi|57524852|ref|NP_001005836.1| alanyl-tRNA synthetase, cytoplasmic [Gallus gallus]
gi|53131091|emb|CAG31790.1| hypothetical protein RCJMB04_11d4 [Gallus gallus]
Length = 913
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 290/827 (35%), Positives = 415/827 (50%), Gaps = 86/827 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F Q HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASQIRQRFIDFFKENQ-HTYVHSSSTIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPL 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R N+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC++AL+ LT
Sbjct: 64 AKLSRATNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKLALDLLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K +P +RLY TYFGG++ GL D E + IWL+LG+ I MK NFWEMG TG
Sbjct: 124 KE-FGIPAERLYVTYFGGNEAAGLQPDLECKQIWLDLGLAEGRILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G+ A VN D +++EIWN+VFI R + ++ PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGD-RDASHLVNQDDPNVLEIWNLVFIQFNREADGSLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLFLP E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFLPYFEAIQKGTGARPYMGQVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+AL+D PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITLALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLNAPKG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEDQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L +++ I GD A+ LYDTYG ++ +A K L + E FE++ + +S
Sbjct: 393 LDRKIQSMGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMEGFEEERKNAQLKS 452
Query: 484 KAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ K A D+ ++D+ + VTDD KY Y D S Y F +LV V
Sbjct: 453 QGKGAGG-EDLLMLDIYAIEELRARGLEVTDDSPKYGYTSDP-SGTYDF----GSLVATV 506
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
AIR + ++ G++ D+T YA GGQI D G +
Sbjct: 507 ----------KAIRREKKFVE----EVSTGQECGIVLDRTCFYAEQGGQIYDQGYMVKDD 552
Query: 596 TTQENGKVE--IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
++E+ K E + + G ++H G + S KV G + +D R M HT +H
Sbjct: 553 DSKED-KTEFTVKNVQVRGGYVLHIGTLYGSLKV--GDQVHLSIDETRRRPVMSNHTATH 609
Query: 654 LLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
+LN ALR VL Q+ V D DF+ G LS + VE N +I V
Sbjct: 610 ILNFALRSVLGEADQRGSLVAPDRLRFDFTAKG-ALSTQEIKKVEGIANQMIEEAKPVYA 668
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
R + + L + E YPD V ++ I ++ S E C GTH+
Sbjct: 669 RDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGIPVEELLADPSGPAGSITSIEFCGGTHL 728
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
N+GH ++ ++ G+R I +TG ++ A+ + L S
Sbjct: 729 QNSGHAGPFVIVSEEAIAKGIRRIVAVTGAEARKALRKVESLKKVLS 775
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R N+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKLSRATNTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC++AL+ LTK +P +RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKLALDLLTK-EFGIPAERLYVTY 137
>gi|195033960|ref|XP_001988798.1| GH11356 [Drosophila grimshawi]
gi|193904798|gb|EDW03665.1| GH11356 [Drosophila grimshawi]
Length = 967
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 283/831 (34%), Positives = 419/831 (50%), Gaps = 86/831 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
+ +K +R+++LD+F Q H V SS +P D ++ F N+GM QFK +FLG
Sbjct: 4 MTAKEVRNAYLDFF-KEQKHIYVHSSSTIPLDDPTLLFTNAGMNQFKPIFLGTADPNSEM 62
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
+ + R N+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A EFLT
Sbjct: 63 SKWVRTVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLT 122
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ + LP DRLY TYFGG GL D E + W++LG+ +HI MK NFWEMG TG
Sbjct: 123 ER-LRLPKDRLYVTYFGGDAASGLQPDLECKQFWMDLGLKPEHILPGSMKDNFWEMGETG 181
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+H+D G S VN D D++EIWN+VFI R S ++ PL K +ID G
Sbjct: 182 PCGPCSELHFDRIG-GRSVPELVNQDDPDVLEIWNLVFIQFNRESDGSLKPLPKKHIDCG 240
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++QNK S YDTDLF+PL + I+ +GA Y + +D +YR+L+D+
Sbjct: 241 MGFERLVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPAYQGRVGADDVDGIDMAYRVLADH 300
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K G L + ++LGD
Sbjct: 301 ARTITIALADGGNPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFASLVSTVVDLLGDA 359
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I I+ EE F +KT L G
Sbjct: 360 FPEVKKDPQHIMDIINEEELQF--------------LKT--------------LTRGRNL 391
Query: 424 LTKQLAR-DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L + + + S T I GD+A+ LYDTYG ++ Q +A K L + +E
Sbjct: 392 LNRTIEKLGTSQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLQIDMAGYEAAKQNSYIL 451
Query: 483 SKAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNSK--RYTFPCLDTNLVG 533
S+ K AS + +I L + K P TDD +KY+Y + + Y F + +V
Sbjct: 452 SQGKGASKIDEITLDVHAISELQEKGLPSTDDSFKYNYEAVSVERDAAYNFSECTSKIVA 511
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
+ ++ ++ SG G++ DKTN YA +GGQI D GV L
Sbjct: 512 LRFENKF-------VQEISSGQK-----------AGIVLDKTNFYAESGGQIYDQGV--L 551
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
E + + + + G I+H G V + V L ++ +D R M+ H+ +H
Sbjct: 552 VKLNDEANEFLVDRVYNRGGYILHIGVVEGNLAVGDEL--QLHIDVERRWLTMKNHSATH 609
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
LN L +VL T QK V ++ DF+ +++D VA EK D++ + +
Sbjct: 610 ALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNCKA-AMTIDQVARTEKLTRDMVYQNMPIY 668
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTH 760
+ + + + L + E+YPD V +I + + +P C GTH
Sbjct: 669 AKESQLALAKRIRGLRSVFDEVYPDPVRVISFGVPVDRLESQPDAETGEQTSVEFCGGTH 728
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQ 811
+ N+GHI + ++ G+R I LTG + A++ + S Q
Sbjct: 729 LRNSGHIMDFVISSEEAIAKGIRRIVALTGPEALKAIKKSEAFEQEISQLQ 779
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG + + R N+QKCIR GGKHNDL G+D
Sbjct: 31 IPLDDPTLLFTNAGMNQFKPIFLGTADPNSEMSKWVRTVNTQKCIRAGGKHNDLDDVGKD 90
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A EFLT+ + LP DRLY T+
Sbjct: 91 VYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTE-RLRLPKDRLYVTY 136
>gi|195397897|ref|XP_002057564.1| GJ18196 [Drosophila virilis]
gi|194141218|gb|EDW57637.1| GJ18196 [Drosophila virilis]
Length = 967
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 282/831 (33%), Positives = 424/831 (51%), Gaps = 86/831 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +K +R ++L++F Q H V SS +P D ++ F N+GM QFK +FLG
Sbjct: 4 LTAKEVRDTYLNFFKEKQ-HIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEM 62
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A + RVAN+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A EFLT
Sbjct: 63 AKWVRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICAWAWEFLT 122
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
++LP DRLY TYFGG GL D E + +WL+LG+ +HI MK NFWEMG TG
Sbjct: 123 -VRLNLPKDRLYVTYFGGDVASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETG 181
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+H+D G S VN D D++EIWN+VFI + R S ++ PL K +ID G
Sbjct: 182 PCGPCSELHFDRIG-GRSVPELVNQDDPDVLEIWNLVFIQYNRESDGSLKPLPKKHIDCG 240
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++QNK S YDTDLF+PL + I+ +GA Y + +D +YR+L+D+
Sbjct: 241 MGFERLVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPAYQGRVGADDADGIDMAYRVLADH 300
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K G L + E+LGD
Sbjct: 301 ARTITIALADGGNPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFATLVNTVVELLGDA 359
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ +I I+ EE F +KT L G
Sbjct: 360 FPEVKKDPQQIMDIINEEELQF--------------LKT--------------LTRGRNL 391
Query: 424 LTKQLAR-DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L + + + + T I GD+A+ LYDTYG ++ Q +A K L + ++
Sbjct: 392 LNRTIEKLGANQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLQIDMAGYDAAKQNSYIL 451
Query: 483 SKAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNSK--RYTFPCLDTNLVG 533
S+ K AS + +I+L + + P T+D +KY Y +N + Y + + +V
Sbjct: 452 SQGKGASKIEEINLDVHAISQLQEQGVPPTNDSFKYKYEAVSNERDSAYNYSECTSKIVA 511
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
+ ++ ++ SG G++ DKTN YA +GGQI D G L
Sbjct: 512 LRYENKF-------VQEISSGQK-----------AGIVLDKTNFYAESGGQIYDQGA--L 551
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
E + + + + G I+H G V + V G ++ +DA R M+ H+ +H
Sbjct: 552 VKLNDEANEFLVDRVYNRGGYILHIGVVEGTLAV--GDEVQLHIDAERRWLTMKNHSATH 609
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
LN L +VL T QK V ++ DF+ ++++ VA E+ D++ + +
Sbjct: 610 ALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKA-AMTIEQVAKTEQLTRDMVYKNMPIY 668
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTH 760
+ + + + L + E+YPD V +I + + +P C GTH
Sbjct: 669 AKESQLALAKRIRGLRSVFDEVYPDPVRVISFGVPVDQLEAQPDAEAGEQTSVEFCGGTH 728
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQ 811
+ N+GHI + ++ G+R I LTG + A++ + S Q
Sbjct: 729 LRNSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALKKSEAFQQEISKLQ 779
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG A + RVAN+QKCIR GGKHNDL G+D
Sbjct: 31 IPLDDPTLLFANAGMNQFKPIFLGTADPNSEMAKWVRVANTQKCIRAGGKHNDLDDVGKD 90
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A EFLT ++LP DRLY T+
Sbjct: 91 VYHHTFFEMLGNWSFGDYFKKEICAWAWEFLT-VRLNLPKDRLYVTY 136
>gi|426242177|ref|XP_004014951.1| PREDICTED: alanine--tRNA ligase, cytoplasmic isoform 1 [Ovis aries]
gi|426242179|ref|XP_004014952.1| PREDICTED: alanine--tRNA ligase, cytoplasmic isoform 2 [Ovis aries]
Length = 968
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 285/825 (34%), Positives = 415/825 (50%), Gaps = 82/825 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAGEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDSRILPGSMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRVGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVAL+D PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF--EQKLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + F E+KL +LK
Sbjct: 393 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTALIAEEKGLVVDMDGFDEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDLMDL-----KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + K TDD KY YH D+N Y F + V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELREKGLEATDDSPKYSYHSDSNGT-YVF----ESAVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
DK + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRRDKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + S KV G R+ +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNTQVRGGYVLHIGTLYGSLKV--GDQVRLFIDEPRRRPVMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL Q+ V D DF+ G +S + E+ N++I V
Sbjct: 612 NFALRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTQQIKRAEEIANEMIEAAKPVYTED 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CSLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLQN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 731 SSHAGVFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLS 775
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 137
>gi|74196486|dbj|BAE34378.1| unnamed protein product [Mus musculus]
Length = 968
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 286/826 (34%), Positives = 419/826 (50%), Gaps = 84/826 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L ++ IR F+++F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAREIRERFINFFRRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TY GG + GL D E R IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVERLYVTYLGGDEAAGLEPDLECRQIWQNLGLDEARILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R S + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRESDGVLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFMPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L +++ I GD A+ LYDTYG ++ +A K L + FE++ + +S
Sbjct: 393 LDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMNGFEEERRLAQLKS 452
Query: 484 KAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ K A + D+ ++D+ K TDD KY+Y D+ S Y F C V V
Sbjct: 453 QGKGAGD-EDLIMLDIYAIEELRAKGLEATDDSPKYNYQSDS-SGSYVFEC----TVATV 506
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLT 594
+ A+R R +D + G++ DKT YA GGQI D G + +
Sbjct: 507 L----------ALR--REKMFVDEVVTGQEC--GVVLDKTCFYAEQGGQIYDEGYLVKVD 552
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+++++ + + G ++H G + + KV G R+ +D R M HT +H+
Sbjct: 553 DSSEDKTEFTVKNAQVRGGYVLHIGTIYGNLKV--GDQVRLFIDEPRRRPVMSNHTATHI 610
Query: 655 LNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
LN ALR VL QK V D DF+ G +S + E+ +N +I V +
Sbjct: 611 LNFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIVNGMIEAAKPVYTQ 669
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVF 762
+ + L + E YPD V ++ I ++ S E C GTH+
Sbjct: 670 DCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPCGPAGSLTSVEFCGGTHLR 729
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
N+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 730 NSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLKKSLS 775
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 137
>gi|71895377|ref|NP_001026227.1| probable alanyl-tRNA synthetase, mitochondrial [Gallus gallus]
gi|53136426|emb|CAG32542.1| hypothetical protein RCJMB04_28n18 [Gallus gallus]
Length = 816
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 281/830 (33%), Positives = 410/830 (49%), Gaps = 94/830 (11%)
Query: 10 VRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP--- 66
VR + IR++FL +F GH + S+P+ P GD ++ FVNSGM QFK VFLG
Sbjct: 27 VRPPAGQIRAAFLRFFEEKHGHRCLPSAPVRPRGDPTLLFVNSGMNQFKPVFLGTAHPRS 86
Query: 67 --APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEF 124
A RV NSQKCVR GGKHNDL GRD+YHHTFFEMLGNWSF DY+K +AC MA E
Sbjct: 87 ELAQQRRVVNSQKCVRAGGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYFKEEACSMAWEL 146
Query: 125 LTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGS 184
LT+ +P DRLY TYFGG GL DEE RD+WL LGVP +H+ MK NFWEMG
Sbjct: 147 LTEV-YKIPKDRLYVTYFGGDSSLGLNADEECRDVWLSLGVPANHVLPFPMKDNFWEMGD 205
Query: 185 TGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
TGPCG +EIHYD G +A A VN D++EIWN+VF+ + R ++PL ++++D
Sbjct: 206 TGPCGPCTEIHYDHVGGGRNASALVNQGSPDVVEIWNLVFMQYSREVDGNLLPLPQHHVD 265
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
TG+G ERLVT+LQNK S YDTDLF P+L+ I K G Y ++ +D +YR+++
Sbjct: 266 TGMGLERLVTVLQNKRSNYDTDLFTPILDAIHKGCGGPRYQGLVGNADVGHVDMAYRVVA 325
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D+ R + V + D ++P + LR ++R A+ +V +G L+ L + E+LG
Sbjct: 326 DHVRTLCVCITDGIYPGLSGAELVLRRILRRAVRFCAEVLHAPRG-LLASLVPAVVEVLG 384
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
D YPE++ + +++ I E F + L G
Sbjct: 385 DAYPELKKNADQVMDIFNENEVAFLS----------------------------SLERGR 416
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF-EQKLNELK 480
+ + + + + + ++A++LY G ++I + K + L AF E L + K
Sbjct: 417 RIIERTVQQMKPSADFPAEVAWSLYGNLGFPLDLIDLMLEEKGIRLDSAAFNELVLEDAK 476
Query: 481 ERSKA-----KAASNVPDIDLMDLKHF-----PVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
++ + V +D+ + P TDD KY Y + + PC T
Sbjct: 477 RKAHGPQEGRQLEGTVVHLDVHSMAQLQRDNIPATDDSPKYSYKLGQHGQYEFSPCQATI 536
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
L ++ DQ + A +H G+I D+TN YA GGQ D G
Sbjct: 537 L--MLYRDQSLQKEVGAGQHC-----------------GVILDRTNFYAEQGGQASDRG- 576
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
YL Q++ + + G ++H V + + G ++ VD RL CM HT
Sbjct: 577 -YLIRLGQQDILFPVESVRLCGGYVIHEVTAVETLRA--GDQVQLFVDEVQRLACMTNHT 633
Query: 651 TSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+HLLN ALR VL T Q+ V +++ DF++ G + + + N+
Sbjct: 634 ATHLLNFALRHVLGDSTEQRGSHVTAEQLRFDFNIKGPVTVEQLQQVEQVVQDVIKRNEA 693
Query: 710 QVDRRHMRASELPFLTHLTV----IPGEIYPDDVILIDI-----------SDKENVISRE 754
+ +E+P V E YPD V ++ + S S E
Sbjct: 694 ------VYMAEVPLALARRVQGLRALDEGYPDPVRIVSLGVPVETVLTSNSQAAMQTSVE 747
Query: 755 PCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
CCGTH+ TG +E ++ + G+ + +TG +K A E G+ L+
Sbjct: 748 LCCGTHLLQTGAMEDLAIVSERQLVKGISRVIAVTGRQAKQAREVGQCLA 797
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 74/106 (69%), Gaps = 6/106 (5%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD ++ FVNSGM QFK VFLG A RV NSQKC+R GGKHNDL GRD+
Sbjct: 58 PRGDPTLLFVNSGMNQFKPVFLGTAHPRSELAQQRRVVNSQKCVRAGGKHNDLEDVGRDT 117
Query: 874 YHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K +AC MA E LT+ +P DRLY T+
Sbjct: 118 YHHTFFEMLGNWSFGDYFKEEACSMAWELLTE-VYKIPKDRLYVTY 162
>gi|384945526|gb|AFI36368.1| alanyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
Length = 968
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 284/825 (34%), Positives = 416/825 (50%), Gaps = 82/825 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT + SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYIHSSATIPLDDPTLLFANAGMNQFKPIFLNTIAPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P+ RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIGRLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ + + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIVNEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + + VTDD KY+YH D S Y F N V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRARGLEVTDDSPKYNYHLDF-SGSYVF----ENTVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + KV G R+ +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGDLKV--GDQVRLFIDEPRRRPIMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ N++I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKPVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 731 SSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLS 775
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 75/113 (66%), Gaps = 6/113 (5%)
Query: 812 ILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDL 866
I + IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL
Sbjct: 26 IHSSATIPLDDPTLLFANAGMNQFKPIFLNTIAPSHPMAKLSRAANTQKCIRAGGKHNDL 85
Query: 867 SFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
G+D YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P+ RLY T+
Sbjct: 86 DDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIGRLYVTY 137
>gi|242011581|ref|XP_002426527.1| alanyl-tRNA synthetase, putative [Pediculus humanus corporis]
gi|212510653|gb|EEB13789.1| alanyl-tRNA synthetase, putative [Pediculus humanus corporis]
Length = 809
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 278/769 (36%), Positives = 421/769 (54%), Gaps = 52/769 (6%)
Query: 54 MCQFKNVFLGLTPAPYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYY 113
M QFK+VFLGLT +VAN QKC+RVGGKHNDLS G D HH+FFEMLGNWSF DY+
Sbjct: 1 MNQFKDVFLGLTRPAATKVANYQKCIRVGGKHNDLSQVGNDGSHHSFFEMLGNWSFGDYF 60
Query: 114 KRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKE 173
K++AC+M+ LT +L +RLY TYFGG + GL D E R+IW E+G+ +HI
Sbjct: 61 KKEACKMSWNLLT-DVYNLQPERLYVTYFGGDESLGLGPDLEVREIWREIGIKENHILPF 119
Query: 174 GMKCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSAD 233
G K NFWEMG+ GPCG +EIHYD VNADR+D+ E+WNIVF+ + R +
Sbjct: 120 GSKDNFWEMGTIGPCGVCTEIHYDHVPGRKDVGNFVNADRDDVTELWNIVFMQYNRNENN 179
Query: 234 TIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNR 293
+V L K+++DTG+GFERLV LQ KTS YDTDLFLPL E I K S K G T T R
Sbjct: 180 ELVKLGKHFVDTGMGFERLVATLQGKTSNYDTDLFLPLFEGIRKYS--KHGGYTGTYDVR 237
Query: 294 TDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELS 353
+D+SYR+++D+ RMI+VAL+D M P+ K+R ++R AL +S+ F G L+K ++
Sbjct: 238 DSIDSSYRIIADHGRMISVALSDGMLPNHQNKVRTIIRKALRVSKKSFNCDSG-LLKNVT 296
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+AE L D YP+I ++KI I+ +E +IF + A+K++K P+++ +I +
Sbjct: 297 NYVAETLEDAYPQIGKHLSKIHFIIEQEEKIFKEQQNVALKKFKKYKNIFPKIKNEDIED 356
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
P L+ G++ L K+ +D + D+ + LYDTYGLS ++L+ L ++E
Sbjct: 357 NPNLISGLE-LFKKYIKDGRKKLLDEDV-WILYDTYGLSPENTKKLSQILGLDFDESSYE 414
Query: 474 QKLNELKERSKAKAASNVPD-------IDLMDLKHFPVTD-------DKYKYDYHYDTNS 519
N K+ K + D I+ ++F + D D +KY+Y D S
Sbjct: 415 NYENNKKKNEMKKLEKKIYDEKHEGDVIESKTQQNFNMADDVELTTKDYFKYEYRID-GS 473
Query: 520 KRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYA 579
+Y F T+++ I+I + DK +I +GL+ DKT L++
Sbjct: 474 DKYLFLNQPTSVLAIIINGKYH--DKISINDFNGNE------------IGLVLDKTQLFS 519
Query: 580 TAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTP-----GL--T 632
+ D+G N + ++ ++ +VH+G SF P G+ T
Sbjct: 520 AEKNRNSDLGYLIFDNN---DILFDVKKVCKFGNGVVHYG----SFTKYPRNAEMGIHDT 572
Query: 633 SRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVD 692
+ ++ +RL M+ HT +LL +R T +K+ V D LD VY +++
Sbjct: 573 GILILNENVRLNLMKNHTCLNLLKGGIREKFPLTCEKNSMVNPDSFTLDLMVYKFKFALN 632
Query: 693 SVAAVEKYINDVIANQVQVDRRHMRASELPFL-THLTVIPG-EIYPDDVILIDISDKENV 750
+ +E ++ +I V V+R+ + + +L ++ PG + ++ LI+I++ +
Sbjct: 633 DILDLENFVRKMIKGDVSVNRKPLNHLQFYYLWENIYFKPGISLIESEIPLIEINNGFTL 692
Query: 751 ISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN 799
I RE C G HV T H+E T++ K ++GV ++ LTG +K EN
Sbjct: 693 I-REVCNGAHVLRTSHLEDFTILKLKKISYGVHRMEGLTGIHAKQIREN 740
Score = 116 bits (290), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Query: 832 MCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEMLGNWSFNDYY 891
M QFK+VFLGLT +VAN QKCIRVGGKHNDLS G D HH+FFEMLGNWSF DY+
Sbjct: 1 MNQFKDVFLGLTRPAATKVANYQKCIRVGGKHNDLSQVGNDGSHHSFFEMLGNWSFGDYF 60
Query: 892 KRDACRMALEFLTKPPVSLPLDRLYFTF 919
K++AC+M+ LT +L +RLY T+
Sbjct: 61 KKEACKMSWNLLT-DVYNLQPERLYVTY 87
>gi|155371881|ref|NP_001094545.1| alanyl-tRNA synthetase, cytoplasmic [Bos taurus]
gi|151553989|gb|AAI48084.1| AARS protein [Bos taurus]
gi|296478238|tpg|DAA20353.1| TPA: alanyl-tRNA synthetase [Bos taurus]
Length = 968
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 284/820 (34%), Positives = 414/820 (50%), Gaps = 82/820 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAGEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDSRILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGRVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF--EQKLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + F E+KL +LK
Sbjct: 393 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTALIAEEKGLVVDMDGFDEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDLMDL-----KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + K TDD KY YH D+ S Y F + V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELREKGLEATDDSPKYSYHSDS-SGTYVF----ESAVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
D+ + A +G G++ DKT YA GGQ D G + + +
Sbjct: 508 ---ALRRDRMFVEEASTGQE-----------CGVVLDKTCFYAEQGGQTYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + S KV G R+ +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNTQVRGGYVLHIGTLYGSLKV--GDQVRLFIDEPRRRPVMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL Q+ V D DF+ G +S + E+ N++I V
Sbjct: 612 NFALRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKPVYTED 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CSLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLQN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ H + ++ ++ G+R I +TG ++ A+ + L
Sbjct: 731 SSHAGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESL 770
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 137
>gi|109148542|ref|NP_001596.2| alanine--tRNA ligase, cytoplasmic [Homo sapiens]
gi|115502460|sp|P49588.2|SYAC_HUMAN RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS; AltName:
Full=Renal carcinoma antigen NY-REN-42
gi|15079238|gb|AAH11451.1| Alanyl-tRNA synthetase [Homo sapiens]
gi|119572224|gb|EAW51839.1| alanyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
gi|123981462|gb|ABM82560.1| alanyl-tRNA synthetase [synthetic construct]
gi|123996297|gb|ABM85750.1| alanyl-tRNA synthetase [synthetic construct]
Length = 968
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 284/825 (34%), Positives = 416/825 (50%), Gaps = 82/825 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ + + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + + VTDD KY+YH D+ S Y F N V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRARGLEVTDDSPKYNYHLDS-SGSYVF----ENTVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + KV G + +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGDLKV--GDQVWLFIDEPRRRPIMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ N++I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKAVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H + ++ ++ G+R I +TG ++ A+ + L S
Sbjct: 731 SSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKCLS 775
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIERLYVTY 137
>gi|383410179|gb|AFH28303.1| alanyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
Length = 968
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 284/825 (34%), Positives = 416/825 (50%), Gaps = 82/825 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT + SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYIHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P+ RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIGRLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ + + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIVNEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + + VTDD KY+YH D S Y F N V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRARGLEVTDDSPKYNYHLDF-SGSYVF----ENTVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + KV G R+ +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGDLKV--GDQVRLFIDEPRRRPIMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ N++I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKPVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 731 SSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLS 775
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 75/113 (66%), Gaps = 6/113 (5%)
Query: 812 ILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDL 866
I + IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL
Sbjct: 26 IHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDL 85
Query: 867 SFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
G+D YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P+ RLY T+
Sbjct: 86 DDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIGRLYVTY 137
>gi|62897207|dbj|BAD96544.1| alanyl-tRNA synthetase variant [Homo sapiens]
Length = 968
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 284/825 (34%), Positives = 416/825 (50%), Gaps = 82/825 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ + + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + + VTDD KY+YH D+ S Y F N V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRARGLEVTDDSPKYNYHLDS-SGSYVF----ENTVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + KV G + +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGDLKV--GDQVWLFIDEPRRRPIMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ N++I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKAVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H + ++ ++ G+R I +TG ++ A+ + L S
Sbjct: 731 SSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKCLS 775
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIERLYVTY 137
>gi|17506981|ref|NP_491281.1| Protein AARS-2 [Caenorhabditis elegans]
gi|74955985|sp|O01541.1|SYAC_CAEEL RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
Full=AlaRS A; AltName: Full=Alanyl-tRNA synthetase
gi|351062273|emb|CCD70212.1| Protein AARS-2 [Caenorhabditis elegans]
Length = 968
Score = 447 bits (1151), Expect = e-122, Method: Compositional matrix adjust.
Identities = 281/825 (34%), Positives = 415/825 (50%), Gaps = 86/825 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L + +RS+F+++F + HT V SS ++P+ D ++ F N+GM QFK +FLG+
Sbjct: 4 LTASEVRSTFINFFREKKEHTYVHSSSVIPHDDPTLLFANAGMNQFKPLFLGIADPNSDL 63
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A R N+QKC+R GGKHNDL G+D YHHT+FEMLGNWSF DY+K++ A E LT
Sbjct: 64 AKLKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGNWSFGDYFKKEIITWAWELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+P +RLY + FGG + G+P D E RDIW +GVP + I GMK NFWEMG G
Sbjct: 124 -TVYGIPAERLYVSVFGGDEANGVPADSEARDIWRSVGVPDERILNFGMKDNFWEMGDVG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G A VNAD ++EIWN+VFI R + PL +ID G
Sbjct: 183 PCGPCSEIHYDRIGN-RDASHLVNADDPMVVEIWNLVFIQFNREEGGVLKPLPAKHIDCG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LG ERL+ ++Q+KTS YDTD+F P+ E I K SG + Y ++ +D +YR+++D+
Sbjct: 242 LGLERLIAVMQDKTSNYDTDIFQPIFEAIHKGSGVRAYTGFIGDEDKDGVDMAYRVVADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R +T+AL+D PD + + LR ++R + + + + G L + ILG+
Sbjct: 302 VRTLTIALSDGGRPDNSGRGYVLRRILRRGVRYASEKLNAQPG-FFASLVPVVISILGET 360
Query: 364 YPEI-QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE+ +D + + +I EE + L + V ++ V++ PE M P
Sbjct: 361 FPELSRDPVTVMDIINDEEKQFLKTLSRGRVL-FQRAVQSLPE----GTMTFP------- 408
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
GD+++ LYDTYG ++ Q +A K L++ + AFE+ + E
Sbjct: 409 ----------------GDVSWRLYDTYGFPADLTQLMAEEKGLSVDNTAFEEARRKAIET 452
Query: 483 SKAKAASNVPDIDL-------MDLKHFPVTDD--KYKYDYHYDTNSKRYTF-PCLDTNLV 532
S A +DL + K P TDD KY Y + + + Y F PC V
Sbjct: 453 SSAGTGKFRDTLDLDVHALAELQQKGVPTTDDSPKYAYTFTGEGSDAVYKFEPC-----V 507
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
G ++ AIR R G +D QL ++ D+TN YA GGQI D+GV
Sbjct: 508 GKIL----------AIR--RDGKFVD--QLAAGEEGAILLDRTNFYAEQGGQIYDVGV-- 551
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
LT E+ + + G IV G+ SF V + R + D + + M+ HT +
Sbjct: 552 LTKVNDESNEFNVSNCQVRGGYIVLVGSAEGSFSVGDQVNERFDEDRKQLI--MKNHTGT 609
Query: 653 HLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
H+LN ALR+VL + QK V D DF+ ++V V E+Y +I + QV
Sbjct: 610 HVLNYALRKVLADSDQKGSLVAPDRMRFDFTNKA-GMTVQQVKKAEEYAQQLIDTKGQVY 668
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTH 760
++ E + L + E YPD V ++ + + + P C GTH
Sbjct: 669 AKNSPLGEAKKVKGLRAMFDETYPDPVRVVAVGTPVEQLLQNPDAEEGQNTTVEFCGGTH 728
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST 805
+ N HI + ++ G+R I LTG ++ A+ L+
Sbjct: 729 LQNVSHIGRIVIASEEAIAKGIRRIVALTGPEAERAIARADRLTA 773
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 69/106 (65%), Gaps = 6/106 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG+ A R N+QKCIR GGKHNDL G+D
Sbjct: 32 IPHDDPTLLFANAGMNQFKPLFLGIADPNSDLAKLKRAVNTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
YHHT+FEMLGNWSF DY+K++ A E LT +P +RLY +
Sbjct: 92 VYHHTYFEMLGNWSFGDYFKKEIITWAWELLT-TVYGIPAERLYVS 136
>gi|115432192|gb|ABI97370.1| AlaRS [Bos taurus]
Length = 869
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 284/823 (34%), Positives = 415/823 (50%), Gaps = 82/823 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAGEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDSRILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGRVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF--EQKLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + F E+KL +LK
Sbjct: 393 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTALIAEEKGLVVDMDGFDEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDLMDL-----KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + K TDD KY YH D+ S Y F + V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELREKGLEATDDSPKYSYHSDS-SGTYVF----ESAVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
D+ + A +G G++ DKT YA GGQ D G + + +
Sbjct: 508 ---ALRRDRMFVEEASTGQE-----------CGVVLDKTCFYAEQGGQTYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + S KV G R+ +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNTQVRGGYVLHIGTLYGSLKV--GDQVRLFIDEPRRRPVMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL Q+ V D DF+ G +S + E+ N++I V
Sbjct: 612 NFALRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKPVYTED 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CSLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLQN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTA 806
+ H + ++ ++ G+R I +TG ++ A+ + L +
Sbjct: 731 SSHAGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKKS 773
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 137
>gi|296231556|ref|XP_002761188.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Callithrix jacchus]
Length = 968
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 287/828 (34%), Positives = 420/828 (50%), Gaps = 82/828 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+++F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIEFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYFGGDEAAGLEPDLECKQIWQNLGLEDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ + + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKILSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLLVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDLMDLKH-----FPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ ++ VTDD KY+YH D+ S Y F N V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRAQGLEVTDDSPKYNYHSDS-SGNYVF----ENTVATVL 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+ ++ + + G ++H G + KV G R+ +D R M HT +H+L
Sbjct: 554 SNEDKTEFTVKNAQVRGGYVLHIGTIYGDLKV--GDQVRLFIDEPRRRPVMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ N++I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKPVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDV-----------ILIDISDKE-NVISREPCCGTHVFN 763
+ + L + E YPD V +L D S ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSVGVPVSELLDDPSGPAGSLTSVEFCGGTHLQN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQ 811
+ H + ++ ++ G+R I +TG ++ A+ + L T+ S +
Sbjct: 731 SSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKTSLSLME 778
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIERLYVTY 137
>gi|326678670|ref|XP_001332388.4| PREDICTED: alanyl-tRNA synthetase, mitochondrial [Danio rerio]
Length = 1001
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 294/826 (35%), Positives = 417/826 (50%), Gaps = 85/826 (10%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLT 65
I V SK +R F+D+F GH +V SS + P GD S+ FVN+GM QFK + LG
Sbjct: 33 IEMAVEFTSKRVRRKFIDFFREGYGHRVVPSSSVRPRGDPSLLFVNAGMNQFKPILLGCA 92
Query: 66 P-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
Y RV NSQKCVR GGKHNDL G+D YHHTFFEMLGNWSF DY+K +AC M
Sbjct: 93 DPRSEMVSYRRVVNSQKCVRAGGKHNDLQDVGKDVYHHTFFEMLGNWSFGDYFKVEACAM 152
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
A LT+ +P RLY +YF G GLP DEETRDIWL +G+ DH+ GMK NFW
Sbjct: 153 AWRLLTEE-YGIPAQRLYVSYFSGDPANGLPADEETRDIWLSMGLRADHVLPFGMKDNFW 211
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG TGPCG +EIHYD G ++AL VNAD D++EIWN+VF+ + R S ++ L +
Sbjct: 212 EMGETGPCGPCTEIHYDHIGNRNAALL-VNADSPDVVEIWNLVFMQYNRESNGSLRALPQ 270
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+DTG+G ERLVT+LQ K S YDTDLF PLL I + S A Y ++ LD +Y
Sbjct: 271 CSVDTGMGLERLVTVLQGKRSNYDTDLFTPLLSAIHQCSKAPAYQGRTGAADVAQLDMAY 330
Query: 301 RMLSDYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+++D+ R I V +AD ++P A LR ++R A+ S +V + +G L L +A
Sbjct: 331 RVVADHIRTICVCIADGVYPGMAGAELVLRRILRRAVRFSTEVLQAPEGALAS-LVPTVA 389
Query: 358 EILGDVYPEIQDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
+LGD YPE+ ++I LI E+ +L++
Sbjct: 390 HLLGDAYPELNTESDRIMDLINQNEAHFLSSLKQ-------------------------- 423
Query: 417 LVLGVKYLTKQLAR-DPSITEISGDMAFTLYDTYGLSKNIIQELAAAK-KLTLCHE--AF 472
G + + + L+ D + + +A++LY G ++I + K K+ E
Sbjct: 424 ---GRRVIDRTLSNMDENSSFFPASVAWSLYRNLGFPLDLIDLMLEEKGKIVDKKEMKVL 480
Query: 473 EQKLNELKERSKAKAASNVPDIDLMDL-----KHFPVTDDKYKYDYHYDTNSKRYTFPCL 527
E + +L +S+ + +DL L + P TDD KY Y ++ + PC
Sbjct: 481 EDEYEKLGLQSEEDEGEKLDQLDLHSLAELQRQRVPHTDDSPKYCYSVGSDGQYVFEPCK 540
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ L ++C D + R G +H A +I D+T+ YA GGQ +D
Sbjct: 541 ASVLA-------LYC-DGALVSEVRQG--------QHCA---VILDQTSFYAEQGGQAND 581
Query: 588 IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMR 647
G Y T ++ + + G +VH V ++ + G + VD RLGCM
Sbjct: 582 QG--YFTKDGLQDVLFPVKCVRLAGGYVVH--KVTAAETLRTGDQVHLHVDEAWRLGCMI 637
Query: 648 AHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIA 706
HT +H+LN ALR +L Q+ ++ DFSV G TL+V + VE+ + ++I
Sbjct: 638 NHTATHVLNFALRELLGPIVSQRGSHCSANRLRFDFSVKG-TLTVSELQKVEELVLNIIR 696
Query: 707 NQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVIL---------IDISDKENVISREPCC 757
V + S + L + E+YPD V + + S++ S E CC
Sbjct: 697 QNADVHVEEVPLSSAKQIAGLRTV-DELYPDPVRVVSVAVPVSDLLASERAEQTSVELCC 755
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
GTH+ TG I V+ + GV I TGD + A E G+ L
Sbjct: 756 GTHLLRTGAIRDFVVVSERQMMKGVCRIVAFTGDDAIKAREAGQAL 801
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 70/106 (66%), Gaps = 6/106 (5%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK + LG Y RV NSQKC+R GGKHNDL G+D
Sbjct: 68 PRGDPSLLFVNAGMNQFKPILLGCADPRSEMVSYRRVVNSQKCVRAGGKHNDLQDVGKDV 127
Query: 874 YHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K +AC MA LT+ +P RLY ++
Sbjct: 128 YHHTFFEMLGNWSFGDYFKVEACAMAWRLLTE-EYGIPAQRLYVSY 172
>gi|326927213|ref|XP_003209787.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Meleagris
gallopavo]
Length = 968
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 294/828 (35%), Positives = 418/828 (50%), Gaps = 89/828 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASQIRQRFIDFFKENR-HTYVHSSSTIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPL 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R N+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC++AL+ LT
Sbjct: 64 AKLSRATNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKLALDLLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K +P +RLY TYFGG++ GL D E + IWL+LG+ I MK NFWEMG TG
Sbjct: 124 KE-FGIPAERLYVTYFGGNEAAGLQPDLECKQIWLDLGLDEGRILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G+ A VN D +++EIWN+VFI R + ++ PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGD-RDASHLVNQDDPNVLEIWNLVFIQFNREADGSLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLFLP E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFLPYFEAIQKGTGARPYMGQVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+AL+D PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITLALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLNAPKG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEDQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L +++ I GD A+ LYDTYG ++ +A K L + E FE++ + +S
Sbjct: 393 LDRKIQSMGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMEGFEEERKNAQLKS 452
Query: 484 KAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ K A D+ ++D+ + VTDD KY Y D S Y F +LV V
Sbjct: 453 QGKGAGG-EDLLMLDIYAIEELRARGLEVTDDSPKYGYTSDP-SGTYDF----GSLVATV 506
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
AIR + S E G++ D+T YA GGQI D G +
Sbjct: 507 ----------KAIRREKKFVEEVSTGQE----CGIVLDRTCFYAEQGGQIYDQGYMVKDD 552
Query: 596 TTQENGKVE--IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
++E+ K E + + G ++H G + S KV G + +D R M HT +H
Sbjct: 553 DSRED-KTEFTVKNVQVRGGYVLHIGTLYGSLKV--GDQVHLSIDETRRRPVMSNHTATH 609
Query: 654 LLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
+LN ALR VL Q+ V D DF+ G LS + VE N +I V
Sbjct: 610 ILNFALRSVLGEADQRGSLVAPDRLRFDFTAKG-ALSTQEIKKVEGIANQMIEEAKTVYA 668
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
R + + L + E YPD V ++ I ++ S E C GTH+
Sbjct: 669 RDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGIPVDELLADPSGPAGSITSIEFCGGTHL 728
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAA---VENGKHLSTA 806
N+GH ++ ++ G+R I +TG ++ A VE+ K L +A
Sbjct: 729 QNSGHAGPFVIVSEEAIAKGIRRIVAVTGAEARKALRKVESLKKLLSA 776
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R N+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKLSRATNTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC++AL+ LTK +P +RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKLALDLLTK-EFGIPAERLYVTY 137
>gi|195115683|ref|XP_002002386.1| GI12987 [Drosophila mojavensis]
gi|193912961|gb|EDW11828.1| GI12987 [Drosophila mojavensis]
Length = 967
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 280/817 (34%), Positives = 422/817 (51%), Gaps = 84/817 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +K +R ++L++F Q H V SS +P D ++ F N+GM QFK +FLG+
Sbjct: 4 LTAKEVRDAYLNFF-KEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGIADPNSEM 62
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
+ + RV N+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A EFLT
Sbjct: 63 SKWVRVVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLT 122
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
++LP DRLY TYFGG GL D E + +WL+LG+ +HI MK NFWEMG TG
Sbjct: 123 DR-LNLPKDRLYVTYFGGDAANGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETG 181
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+H+D G S VN D D++EIWN+VFI + R S ++ L K +ID G
Sbjct: 182 PCGPCSELHFDRIG-GRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCG 240
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++QNK S YDTDLF+PL + I+ +GA Y + +D +YR+L+D+
Sbjct: 241 MGFERLVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPAYQGRVGADDADGIDMAYRVLADH 300
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K G L + E+LGD
Sbjct: 301 ARTITIALADGGNPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFATLVTTVVELLGDA 359
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I I+ EE + F K L + + N++ LG
Sbjct: 360 FPEVKKDPQHIMDIINEEEQQF----------LKTLSRGR------NLLNRTIEKLGADQ 403
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
T I GD+A+ LYDTYG ++ Q +A K L + + ++ + S
Sbjct: 404 KT-----------IPGDVAWRLYDTYGFPVDLTQLMAEEKSLQIDMDGYDAAKHNSYILS 452
Query: 484 KAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNSK--RYTFPCLDTNLVGI 534
+ K AS + +I+L + K P T+D +KY Y ++N + Y F + +V +
Sbjct: 453 QGKGASKIDEINLDVHAISELQEKGVPPTNDSFKYIYEAESNERDSAYKFSDCTSKIVAL 512
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
++ ++ SG G++ DKTN YA +GGQI D G L
Sbjct: 513 RYENKF-------VQEITSGQK-----------AGIVLDKTNFYAESGGQIFDQGA--LV 552
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E + + + + G I+H G V + V G ++ +D R M+ H+ +H
Sbjct: 553 KLNDEANEFLVDRVYNRGGYILHIGVVEGTLAV--GDEVQLHIDVERRWLTMKNHSATHA 610
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN L +VL T QK V ++ DF+ ++++ VA E+ D++ ++ +
Sbjct: 611 LNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKA-AMTIEQVAKTEQLTRDMVYKEMPIYA 669
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
+ + + + L + E+YPD V +I S+ S E C GTH+
Sbjct: 670 KESQLALAKRIRGLRSVFDEVYPDPVRVISFGVPVDQLESQPDSEAGEQTSVEFCGGTHL 729
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
N+GHI + ++ G+R I LTG + A++
Sbjct: 730 RNSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALK 766
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG+ + + RV N+QKCIR GGKHNDL G+D
Sbjct: 31 IPLDDPTLLFANAGMNQFKPIFLGIADPNSEMSKWVRVVNTQKCIRAGGKHNDLDDVGKD 90
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A EFLT ++LP DRLY T+
Sbjct: 91 VYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTD-RLNLPKDRLYVTY 136
>gi|403298315|ref|XP_003939968.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Saimiri boliviensis
boliviensis]
Length = 968
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 284/825 (34%), Positives = 417/825 (50%), Gaps = 82/825 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+++F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIEFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYFGGDEAAGLEPDLECKQIWQNLGLEDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ + + +G L + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRG-FFATLVDVVVRSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKILSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLLVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDLMDLKH-----FPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K + +D+ ++ VTDD KY+YH D+ S Y F N V V+
Sbjct: 453 QGKGAGGEDFIMLDIYAIEELRAQGLEVTDDSPKYNYHSDS-SGNYVF----ENTVATVL 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + KV G ++ +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGDLKV--GDQVQLFIDEPRRRPVMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ N++I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKRAEEIANEMIEAAKPVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLQN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H + ++ ++ G+R I +TG ++ A+ + L T+ S
Sbjct: 731 SSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLRTSLS 775
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIERLYVTY 137
>gi|197099554|ref|NP_001125391.1| alanine--tRNA ligase, cytoplasmic [Pongo abelii]
gi|75042108|sp|Q5RC02.1|SYAC_PONAB RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|55727911|emb|CAH90708.1| hypothetical protein [Pongo abelii]
Length = 968
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 287/832 (34%), Positives = 418/832 (50%), Gaps = 88/832 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT + SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASKIRQRFIDFFKRNE-HTYIHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKPSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ + + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + + VTDD KY+YH D+ S Y F N V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRARDLEVTDDSPKYNYHLDS-SGSYVF----ENTVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + KV G + +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGDLKV--GDQVWLFIDEPRRRPIMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ N++I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKPVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CSLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNV 815
+ H + ++ ++ G+R I +TG E K L A S + L+V
Sbjct: 731 SSHAGAFVIVTEEAIAKGIRRIVAVTG------AEAQKALRKAGSLKKPLSV 776
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 76/113 (67%), Gaps = 6/113 (5%)
Query: 812 ILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDL 866
I + IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL
Sbjct: 26 IHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKPSRAANTQKCIRAGGKHNDL 85
Query: 867 SFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
G+D YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 86 DDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIERLYVTY 137
>gi|397479616|ref|XP_003811107.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Pan paniscus]
gi|410222120|gb|JAA08279.1| alanyl-tRNA synthetase [Pan troglodytes]
gi|410355185|gb|JAA44196.1| alanyl-tRNA synthetase [Pan troglodytes]
Length = 968
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 288/832 (34%), Positives = 418/832 (50%), Gaps = 88/832 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ + + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNAIRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + + VTDD KY+YH D+ S Y F N V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRARGLEVTDDSPKYNYHLDS-SGSYVF----ENTVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + KV G + +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGDLKV--GDQVWLFIDEPRRRPIMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ N++I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKAVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNV 815
+ H + ++ ++ G+R I +TG E K L A S + L+V
Sbjct: 731 SSHAGAFVIVTEEAIAKGIRRIVAVTG------AEAQKALRKAESMKKCLSV 776
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIERLYVTY 137
>gi|328781428|ref|XP_395392.3| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Apis
mellifera]
Length = 1194
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 287/813 (35%), Positives = 419/813 (51%), Gaps = 88/813 (10%)
Query: 10 VRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP--- 66
+ + +K IR +++D+F ++GH V SS +P+ D ++ F N+GM QFK +FLG+
Sbjct: 3 IMMTAKQIRQAYIDFF-KSKGHEYVHSSSTIPHDDPTLLFTNAGMNQFKPIFLGIVDPNS 61
Query: 67 --APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEF 124
A R NSQKC+R GGKHNDL G+D YHHTFFEM+GNWSF DY+K++ C A EF
Sbjct: 62 DMAKLVRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICTWAWEF 121
Query: 125 LTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGS 184
LT + L DRLY TYFGG ++ L DEE + IWL LG+ H+ MK NFWEMG
Sbjct: 122 LT-VKLKLSSDRLYVTYFGGDEKNNLKPDEECKQIWLSLGLSPTHVLPGNMKDNFWEMGE 180
Query: 185 TGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
TGPCG SSEIHYD G +A VN D D++EIWN+VFI R + + L K +ID
Sbjct: 181 TGPCGPSSEIHYDRIGNREAA-HLVNQDDPDVLEIWNLVFIQFNRENDGNLKLLPKKHID 239
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
GLG ERLV+I+QNK++ YDTDLF+PL + I+K + A Y + +D +YR+L+
Sbjct: 240 CGLGLERLVSIIQNKSANYDTDLFMPLFDAIQKGTKAPSYQGKVGKEDINGIDMAYRVLA 299
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D++R IT+ALAD PD T + LR ++R A+ + + K G L + ++LG
Sbjct: 300 DHARTITIALADGGVPDNTGRGYVLRRILRRAVRYAIEKLNAKPG-FFGSLVNVVVDLLG 358
Query: 362 DVYPEI-QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
DV+PE+ +D + I +I EE++ L + L +T +LE NI+
Sbjct: 359 DVFPEVTKDPQHIIDIINEEETQFLKTLSRGR----NLLNRTIVKLESSNIL-------- 406
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
GD+A+ LYDTYG ++ Q +A K L + +E+ E +
Sbjct: 407 -----------------PGDVAWRLYDTYGFPFDLTQLMAEEKGLKVDVIGYEEAKKEAQ 449
Query: 481 ERSKAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNS--KRYTF-PCLDTN 530
S+ K+ I+L + + T+D KY+Y +N + Y F PC T
Sbjct: 450 LISQNKSGEVDDQINLDIHAITELQNEKIKPTNDIPKYNYKVISNKIYEEYEFAPCFSTI 509
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
+ A+R A++ ++ VG++ D+TN YA GGQI D G
Sbjct: 510 I---------------ALRRAKTFVD----EVSSGEEVGILLDQTNFYAEQGGQIYDEG- 549
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
+LT E+ +V I + G I+H G +VS K+ +D R M HT
Sbjct: 550 -FLTKIDDEDSEVHIKNVQVRGGYILHIG-IVSQGKLKKNDKVFSNIDTTRRRLLMSNHT 607
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H+LN ALR +L T QK V D DF+ G ++ + + VE+ N++I
Sbjct: 608 ATHVLNYALREILGTEVDQKGSLVAPDRLRFDFTNKG-AMTTEQIRKVEEITNNIINENK 666
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CC 757
V + + L + E YPD V ++ I + + P C
Sbjct: 667 MVYAKECNLGLAKTIQGLRAMFEETYPDPVRVVSIGIPVEDLEKNPLSSDALKTSVEFCG 726
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
GTH+ TGHI++ ++ ++ G+R I LTG
Sbjct: 727 GTHLHYTGHIKNFIIVSEEAIAKGIRRIVALTG 759
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG+ A R NSQKCIR GGKHNDL G+D
Sbjct: 32 IPHDDPTLLFTNAGMNQFKPIFLGIVDPNSDMAKLVRAVNSQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEM+GNWSF DY+K++ C A EFLT + L DRLY T+
Sbjct: 92 VYHHTFFEMMGNWSFGDYFKKEICTWAWEFLT-VKLKLSSDRLYVTY 137
>gi|405978504|gb|EKC42884.1| Alanyl-tRNA synthetase, cytoplasmic [Crassostrea gigas]
Length = 965
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 276/813 (33%), Positives = 406/813 (49%), Gaps = 83/813 (10%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP---- 66
+L IR+ F+D+F + H V SS +VP D ++ F N+GM QFK +FL +
Sbjct: 4 KLTGAEIRNLFVDFFKEKE-HLYVHSSSVVPLDDPTLLFTNAGMNQFKPIFLEIVDPNSD 62
Query: 67 -APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
A Y R ANSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K + C A EFL
Sbjct: 63 MAKYVRAANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKTECCGWAWEFL 122
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
T+ V LP +RLY TYFGG++++ L D+ET++IWL LGVP + + GMK NFWEMG T
Sbjct: 123 TER-VGLPKERLYVTYFGGNEKFNLKPDDETKNIWLNLGVPAERVLPFGMKDNFWEMGET 181
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG +EIHYD G A A VN D ++IEIWN+VFI R S + L + + D
Sbjct: 182 GPCGPCTEIHYDKVG-GRDAKALVNMDDPEVIEIWNLVFIQFNRESETELNELPRKHCDC 240
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ERLV ++Q KTS YDTDLF P E I+K + ++PY + +D +YR+L+D
Sbjct: 241 GMGLERLVCVMQGKTSNYDTDLFSPYFEFIQKATNSQPYQGRVGKDDVDGVDMAYRVLAD 300
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
++R +TVALAD PD + LR ++R A+ + K G + L + E LG+
Sbjct: 301 HARTLTVALADGGRPDNMGRGYVLRRILRRAVRYGTEKLNAKPG-MFASLVDVVVESLGN 359
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE++ I+ I+ EE F +KT L G +
Sbjct: 360 AFPELKKDPEMIKDIINEEEAQF--------------LKT--------------LTRGRR 391
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L + + + T + GD+A+ LYDTYG ++ +A K L + A+E + +
Sbjct: 392 LLERTIGKLGDTTSLPGDIAWRLYDTYGFPVDLTALMAEEKGLAVDMPAYESAKKDAQAL 451
Query: 483 SKAKAAS-------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
S+ + +V I + + P TDD KY Y N K Y+F ++ +
Sbjct: 452 SQGTGGTAADLIGLDVHAISDLQNRGVPTTDDAPKYKYQATENGK-YSFEPATGKVIALR 510
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
+K + SG G++ D+T+ YA GGQI D G +L
Sbjct: 511 -------RNKEFVEEVSSGQE-----------CGVLLDRTSFYAEQGGQIYDTG--FLVK 550
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+ + + + G ++H G + + G ++ +D R M+ HT +H+L
Sbjct: 551 ENDPDVEFSVRNVQVRAGYVLHIGVMEGVLRT--GDIVQLNIDEERRCSVMKNHTGTHML 608
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N LR +L Q+ V D DFS G + V V VE+ +N + +V +
Sbjct: 609 NFGLREILKEADQRGSLVAPDRLRFDFSAKG-AMKVSEVKQVEEIVNKMAEKNGEVYDMN 667
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFN 763
+ + + L + E+YPD V ++ I N + +P C GTH+
Sbjct: 668 VSLAVAKAIQGLRAVFDEVYPDPVRVVSIGVDVNQLVEDPMGPGASTTSVEFCGGTHLKR 727
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
GHI ++ ++ G+R I LTG + A
Sbjct: 728 AGHIGKMVIVSEEAIAKGIRRIIALTGTEAVKA 760
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK +FL + A Y R ANSQKCIR GGKHNDL G+D
Sbjct: 32 VPLDDPTLLFTNAGMNQFKPIFLEIVDPNSDMAKYVRAANSQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K + C A EFLT+ V LP +RLY T+
Sbjct: 92 VYHHTFFEMLGNWSFGDYFKTECCGWAWEFLTE-RVGLPKERLYVTY 137
>gi|380810080|gb|AFE76915.1| alanyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
Length = 968
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 283/825 (34%), Positives = 416/825 (50%), Gaps = 82/825 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT + SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYIHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P+ RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIGRLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ + + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIVNEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + + VTDD KY+YH D S Y F N V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRARGLEVTDDSPKYNYHLDF-SGSYVF----ENTVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + KV G R+ +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGDLKV--GDQVRLFIDEPRRRPIMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ +++I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIASEMIEAAKPVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 731 SSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLS 775
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 75/113 (66%), Gaps = 6/113 (5%)
Query: 812 ILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDL 866
I + IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL
Sbjct: 26 IHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDL 85
Query: 867 SFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
G+D YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P+ RLY T+
Sbjct: 86 DDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIGRLYVTY 137
>gi|380028001|ref|XP_003697700.1| PREDICTED: alanine--tRNA ligase, cytoplasmic-like [Apis florea]
Length = 1192
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 284/819 (34%), Positives = 420/819 (51%), Gaps = 88/819 (10%)
Query: 10 VRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP--- 66
+ + +K IR +++D+F N +GH V SS +P+ D ++ F N+GM QFK +FLG+
Sbjct: 3 IMMTAKQIRQAYIDFFKN-KGHEYVHSSSTIPHDDPTLLFTNAGMNQFKPIFLGIVDPNS 61
Query: 67 --APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEF 124
A R NSQKC+R GGKHNDL G+D YHHTFFEM+GNWSF DY+K++ C A EF
Sbjct: 62 DMAKLVRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICTWAWEF 121
Query: 125 LTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGS 184
LT + L DRLY TYFGG ++ L DEE + IWL LG+ HI MK NFWEMG
Sbjct: 122 LT-VKLKLSSDRLYVTYFGGDEKNNLKPDEECKQIWLSLGLSPTHILPGNMKDNFWEMGE 180
Query: 185 TGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
TGPCG SSEIHYD G +A VN D D++EIWN+VFI R + + L K +ID
Sbjct: 181 TGPCGPSSEIHYDRIGNREAA-HLVNQDDPDVLEIWNLVFIQFNRENNGNLKLLPKKHID 239
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
GLG ERLV+I+QNK++ YDTDLF+PL + I+K + A Y ++ +D +YR+L+
Sbjct: 240 CGLGLERLVSIIQNKSANYDTDLFMPLFDAIQKGTRAPSYQGKVGKEDKDGIDMAYRVLA 299
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D++R IT+ALAD PD T + LR ++R A+ + + K G L + ++LG
Sbjct: 300 DHARTITIALADGGIPDNTGRGYVLRRILRRAVRYAIEKLNAKPG-FFGSLVNVVVDLLG 358
Query: 362 DVYPEI-QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
DV+PE+ +D + I +I EE++ L + G
Sbjct: 359 DVFPEVTKDPQHIIDIINEEETQFLKTLSR-----------------------------G 389
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNE 478
L + + + S + GD+A+ LYDTYG ++ Q + K L + +E+ K +
Sbjct: 390 RNLLNRTIVKLESSNVLPGDVAWRLYDTYGFPFDLTQLMVEEKGLKVDIIGYEEAKKQAQ 449
Query: 479 LKERSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNS--KRYTF-PCLDTN 530
L ++K+ + ++D+ + K T+D KY+Y N + Y F PC T
Sbjct: 450 LISQNKSGEVDDQINLDVHAITELQNKKIKPTNDIPKYNYKVINNKICEEYEFAPCFSTV 509
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
+ A+R A++ + ++ VG++ D+TN YA GGQ+ D G
Sbjct: 510 I---------------ALRRAKTFVN----EVSSGEEVGILLDQTNFYAEQGGQMYDEG- 549
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
+LT E+ +V I + G ++H G +VS K+ +D R M HT
Sbjct: 550 -FLTKIDDEDTEVHIKNVQVRGGYVLHIG-IVSQGKLKKNDKVFSNIDTTRRRLLMSNHT 607
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H LN ALR +L T QK V D DF+ G ++ + + VE+ N++I
Sbjct: 608 ATHALNYALREILGTEVDQKGSLVAPDRLRFDFTNKG-AMTTEQIRKVEEITNNIINENK 666
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CC 757
V + + L + E YPD V ++ I + + P C
Sbjct: 667 MVYAKECNLGLAKTIQGLRAMFEETYPDPVRVVSIGIPVEDLEKNPLSSGALKTSVEFCG 726
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
GTH+ TGHI + ++ ++ G+R I LTG + A
Sbjct: 727 GTHLHYTGHIRNFVIVSEEAIAKGIRRIVALTGPEAVKA 765
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG+ A R NSQKCIR GGKHNDL G+D
Sbjct: 32 IPHDDPTLLFTNAGMNQFKPIFLGIVDPNSDMAKLVRAVNSQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEM+GNWSF DY+K++ C A EFLT + L DRLY T+
Sbjct: 92 VYHHTFFEMMGNWSFGDYFKKEICTWAWEFLT-VKLKLSSDRLYVTY 137
>gi|332846336|ref|XP_001169520.2| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase, cytoplasmic
isoform 2 [Pan troglodytes]
Length = 968
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 287/832 (34%), Positives = 417/832 (50%), Gaps = 88/832 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+M LE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMGLELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ + + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNAIRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + + VTDD KY+YH D+ S Y F N V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRARGLEVTDDSPKYNYHLDS-SGSYVF----ENTVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + KV G + +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGDLKV--GDQVWLFIDEPRRRPIMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ N++I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKAVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNV 815
+ H + ++ ++ G+R I +TG E K L A S + L+V
Sbjct: 731 SSHAGAFVIVTEEAIAKGIRRIVAVTG------AEAQKALRKAESMKKCLSV 776
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+M LE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMGLELLTQ-EFGIPIERLYVTY 137
>gi|410254294|gb|JAA15114.1| alanyl-tRNA synthetase [Pan troglodytes]
Length = 968
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 287/832 (34%), Positives = 417/832 (50%), Gaps = 88/832 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+M LE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMGLELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ + + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNAIRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + + VTDD KY+YH D+ S Y F N V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRARGLEVTDDSPKYNYHLDS-SGSYVF----ENTVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + KV G + +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGDLKV--GDQVWLFIDEPRRRPIMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ N++I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKAVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNV 815
+ H + ++ ++ G+R I +TG E K L A S + L+V
Sbjct: 731 SSHAGAFVIVTEEAIAKGIRRIVAVTG------AEAQKALRKAESMKKCLSV 776
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+M LE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMGLELLTQ-EFGIPIERLYVTY 137
>gi|1015321|dbj|BAA06808.1| alanyl-tRNA synthetase [Homo sapiens]
Length = 968
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 283/825 (34%), Positives = 415/825 (50%), Gaps = 82/825 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGK NDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKQNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ + + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + + VTDD KY+YH D+ S Y F N V V+
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRARGLEVTDDSPKYNYHLDS-SGSYVF----ENTVATVM 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 508 ---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + KV G + +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGDLKV--GDQVWLFIDEPRRRPIMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ N++I V +
Sbjct: 612 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKAVYTQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H + ++ ++ G+R I +TG ++ A+ + L S
Sbjct: 731 SSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKCLS 775
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGK NDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKQNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIERLYVTY 137
>gi|340370456|ref|XP_003383762.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like isoform 1
[Amphimedon queenslandica]
Length = 966
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 274/809 (33%), Positives = 418/809 (51%), Gaps = 90/809 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +K IR F+D+F ++ HT V SS +P D ++ F N+GM QFK +F G
Sbjct: 5 LTAKDIRRMFIDFF-RSKDHTFVPSSSTIPVDDPTLLFTNAGMNQFKPIFQGTVDPSSDF 63
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A R ANSQKC+R GGKHNDL G+D+YHHTFFEM+GNWSF DY+K +A +MA FLT
Sbjct: 64 ATLSRAANSQKCIRAGGKHNDLDDVGKDTYHHTFFEMMGNWSFGDYFKEEAIKMAWSFLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ + LP DRLY TYFGG ++ LP D+E ++IWL G+P + + +K NFWEMG G
Sbjct: 124 ES-LKLPKDRLYVTYFGGDEKLKLPADDECKEIWLNTGLPPERVLPFSVKDNFWEMGEVG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G A RVN D +++E+WN+VF+ + S +I PL KN +DTG
Sbjct: 183 PCGPCSEIHYDRIGGRFVA-DRVNMDDPNVLELWNVVFMQFNKESDGSIKPLPKNNVDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LG ER+V+++Q K S YDTDLFLP+ + IE +G++ Y + +D +YR+++D+
Sbjct: 242 LGLERIVSVVQGKFSNYDTDLFLPIFDAIEAKTGSRSYTGKIGAEDVDGVDMAYRVVADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R +T+A++D PDAT + LR ++R + + K G L + ++LG+
Sbjct: 302 IRTLTIAISDGGKPDATGRGYVLRRILRRGVRYITEKLNAKPGTFAS-LVPTVLDVLGEA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PEI + + EE + F +KT L G +
Sbjct: 361 FPEITKDPEMVMDTINEEEKQF--------------LKT--------------LSHGKRM 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE--QKLNELKE 481
++L R + GD+A+ LYDTYG ++ Q +A +++T+ E +E + + + K
Sbjct: 393 FERKL-RKIENNLLPGDVAWRLYDTYGFPVDLTQLMAEERQVTVDMEGYEKAKAMAQEKA 451
Query: 482 RSKAKAASNVPDIDLMDLKHF-----PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
R + +D+ + H P T+D KYDY D S Y F + +++ +
Sbjct: 452 RGTGREIDESLQLDVHAISHLQSKGVPPTNDSSKYDYSSD-ESGNYKFQSCEGSVIAL-- 508
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
+K + SG VG++ DKT YA GGQI D G Y+
Sbjct: 509 -----RYNKEFVDEVSSGQV-----------VGVLTDKTCFYAEQGGQIYDEG--YIVKI 550
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+E + + ++ G ++H G++ + +V G + +D R M+ HT +H+LN
Sbjct: 551 GEEETEFIVRDVQVRGGYVLHVGSIEGTLRV--GDKVNMTIDGDRRSDVMKNHTGTHVLN 608
Query: 657 AALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALRRV+ QK V D DFS G + D + E+ +VI V +
Sbjct: 609 FALRRVIGEADQKGSLVAPDRLRFDFSAKG-AMKTDQIKKCEEVALEVIKASHPV---YA 664
Query: 717 RASELPF---LTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHV 761
+ + LP + L + E+YPD V ++ I + + +P C GTH+
Sbjct: 665 QETPLPVAKEIQGLRAVFDEVYPDPVRVLSIGVPVDKLVEDPSGPWAINYSVEFCGGTHL 724
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
++GHI+S ++ ++ G+R I LTG
Sbjct: 725 RSSGHIQSFAIVTEEAIAKGIRRIVALTG 753
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +F G A R ANSQKCIR GGKHNDL G+D
Sbjct: 32 IPVDDPTLLFTNAGMNQFKPIFQGTVDPSSDFATLSRAANSQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEM+GNWSF DY+K +A +MA FLT+ + LP DRLY T+
Sbjct: 92 TYHHTFFEMMGNWSFGDYFKEEAIKMAWSFLTE-SLKLPKDRLYVTY 137
>gi|417413283|gb|JAA52978.1| Putative alanyl-trna synthetase, partial [Desmodus rotundus]
Length = 973
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 281/820 (34%), Positives = 411/820 (50%), Gaps = 82/820 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 10 LTASEIRQRFIDFFKKNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 68
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 69 AKLRRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 128
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E R IW LG+ I MK NFWEMG TG
Sbjct: 129 QE-FGIPVERLYVTYFGGDEAAGLEADLECRQIWQNLGLDDSKILPGNMKDNFWEMGDTG 187
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+HYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 188 PCGPCSEVHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGVLKPLPKKSIDTG 246
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 247 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGADDADGIDMAYRVLADH 306
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 307 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLSASKG-FFATLVDVVVQSLGDA 365
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 366 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 397
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ +L +LK
Sbjct: 398 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLAVDMDGFEEERRLAQLKS 457
Query: 482 RSKAKAAS-----NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ I+ + K TDD KY Y D YTF + V V+
Sbjct: 458 QGKGAGGEDHLMLDIYAIEELREKSLEATDDSPKYSYLSDAGGS-YTF----ESTVATVM 512
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 513 ---ALRREKRFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKIDD 558
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+ ++ + + G ++H G + KV G R+ +D R M HT +H+L
Sbjct: 559 SMEDKTEFTVKNTQVRGGYVLHVGTIYGHLKV--GDQVRLFIDEPRRRPVMSNHTATHIL 616
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL Q+ V D DF+ G +S + E+ +N++I V +
Sbjct: 617 NFALRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTQQIKKAEQIVNEMIEAAKPVYAQD 675
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 676 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLQN 735
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ H + ++ ++ G+R I +TG ++ A+ + L
Sbjct: 736 SSHAGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESL 775
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 37 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLRRAANTQKCIRAGGKHNDLDDVGKD 96
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 97 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 142
>gi|290986366|ref|XP_002675895.1| alanyl-tRNA synthetase [Naegleria gruberi]
gi|284089494|gb|EFC43151.1| alanyl-tRNA synthetase [Naegleria gruberi]
Length = 957
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 292/821 (35%), Positives = 424/821 (51%), Gaps = 91/821 (11%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
SK IR F+++F HT V SS +VP+ D ++ F N+GM QFK +FLG A
Sbjct: 17 SKEIRKQFVEFFEKKYEHTFVPSSSVVPHEDPTLLFTNAGMNQFKAIFLGQASPDSSLAK 76
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R ANSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+KR+A A E LT+
Sbjct: 77 LKRAANSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKREAITWAWELLTEV 136
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
L DRLY TYFGG+++ LP DEE + IW + VP DHI MK NFWEMG TGPC
Sbjct: 137 -YGLEKDRLYVTYFGGNEKLNLPADEEAKQIWGQF-VPDDHILPGSMKDNFWEMGDTGPC 194
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G SEIHYD G ++A VN D +++EIWN VF+ R T+ L ++DTG+G
Sbjct: 195 GPCSEIHYDRIGGRNAA-HLVNMDDPNVLEIWNNVFMEFNRKEDQTLEYLPAKHVDTGMG 253
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
ERLV+ILQNK S YDTD+F+P+ E I+K +G++PY + +DT+YR+++D+ R
Sbjct: 254 LERLVSILQNKMSNYDTDVFMPIFEAIQKETGSRPYTGKLGAEDVDHIDTAYRVIADHIR 313
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
+ +AL+D +PD T + LR +VR A+ E K+G L + L+ + E++GD +P
Sbjct: 314 TLVIALSDGGYPDNTGRGYVLRRIVRRAVRFGE-FMNAKKGFLTR-LASCVVELMGDFFP 371
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ + K++ ++ E +F KT L +G+K+
Sbjct: 372 ELKKNSEKVEELIQSEEVLF--------------AKT--------------LRVGLKFFN 403
Query: 426 KQLARDPSITE--ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
+ + S E +SG AF LY TYG ++ +A + +T+ + E K KE
Sbjct: 404 RIAEKMKSNGESVVSGPDAFKLYATYGFPVDLTLIMAQEQGMTV--DMVEYK----KEME 457
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSK--RYTFPCLDTNLVGIVIGDQVF 541
K AS + D+K + DK + + + +Y + + +V I
Sbjct: 458 KHATASQGTKQEATDMKLGVIETDKLQNELKIEPTQDDIKYVWENIQAKVVAIF------ 511
Query: 542 CIDKHAIRHARSGASIDSIQLE-HNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
+ S ++ + E +G+I D+TN YA GGQ D GV + T
Sbjct: 512 ---------SESSGFVEELNTECEEVNIGIILDQTNFYAEGGGQAPDNGVLRIGET---- 558
Query: 601 GKVEIGELASLEGKIVHFGNVVSS---FKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
++++ + G I+H NV S VT G T EV+ R HT++H+LN
Sbjct: 559 -ELKVVNVQKFAGYILHIVNVSESKLAGNVTVGTTVSSEVNYERREPIAANHTSTHMLNF 617
Query: 658 ALRRVL--TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
ALR+VL C Q S V +E DFS + SV+ VA VEK +ND+I V +
Sbjct: 618 ALRKVLGTDCDQQGSI-VKEEELCFDFSA-AKAPSVEQVAEVEKIVNDLIVADHPVFSKV 675
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKEN----VISREPCCGTHVFN 763
+ L + Y + V ++ I +D+ N +IS E C GTH+
Sbjct: 676 QERDAAYEINGLRAMFSANYGEQVRVVSIGQDSDSIMTDRSNEKWRLISVEFCGGTHLKQ 735
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
T ++ ++ KS + G R I LT ++K AVE + S
Sbjct: 736 TSQAQTFVILSEKSISTGKRRIVALTRKAAKEAVERAQKFS 776
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG A R ANSQKCIR GGKHNDL G+D
Sbjct: 43 VPHEDPTLLFTNAGMNQFKAIFLGQASPDSSLAKLKRAANSQKCIRAGGKHNDLDDVGKD 102
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+KR+A A E LT+ L DRLY T+
Sbjct: 103 TYHHTFFEMLGNWSFGDYFKREAITWAWELLTE-VYGLEKDRLYVTY 148
>gi|391342382|ref|XP_003745499.1| PREDICTED: alanine--tRNA ligase, cytoplasmic-like isoform 1
[Metaseiulus occidentalis]
Length = 965
Score = 444 bits (1142), Expect = e-121, Method: Compositional matrix adjust.
Identities = 280/824 (33%), Positives = 429/824 (52%), Gaps = 88/824 (10%)
Query: 15 KSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLT-----PAPY 69
K +R+ F+++F HT V SS ++P+ D ++ F N+GM Q+K +FLG A +
Sbjct: 8 KEVRTRFIEFFQKKYQHTFVPSSCVIPHDDPTLLFANAGMNQYKPIFLGTVDPNTEAAKW 67
Query: 70 PRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP 129
R NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF D++K++ C A EFLTK
Sbjct: 68 KRTVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDFFKKEICAWAWEFLTKE- 126
Query: 130 VSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
L DRLY TYFGG+ + GL D E + IWL LGVP DHI MK NFWEMG TGPCG
Sbjct: 127 FGLAEDRLYVTYFGGNPEAGLEPDNECKGIWLALGVPEDHILPGSMKDNFWEMGETGPCG 186
Query: 190 YSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
SEIH+D G ++A VN D D++EIWN+VFI + R + ++ PL K ++DTG+GF
Sbjct: 187 PCSEIHFDRIGGRNAA-HLVNMDDPDVLEIWNLVFIQYNREADSSLRPLPKQHVDTGMGF 245
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERLV+++QNK S YDTD+F+P+ + I+K +G + Y + +D +YR+L+D++R
Sbjct: 246 ERLVSVIQNKRSNYDTDVFVPIFDAIQKSTGVRAYTGKVGAEDVDGIDMAYRVLADHART 305
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
+T+AL+D PD + LR ++R A+ + + K G + L + +LGD +PE
Sbjct: 306 LTIALSDGGRPDNVGRGYVLRRILRRAIRYATEKMNAKPG-MFAGLVPVVVGLLGDAFPE 364
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
++ + + I+ EE F +KT L G + LTK
Sbjct: 365 LKKDPDTVMEIINEEETQF--------------LKT--------------LSRGRRLLTK 396
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE--LKERSK 484
+++ + G++A+ LYDTYG ++ Q + + + +E+ L +
Sbjct: 397 AVSKIEKGGLLPGEVAWRLYDTYGFPVDLTQLMVEESGIFVDSAGYEKAKQAAILASQGG 456
Query: 485 AKAASNVPDID------LMDLKHFPVTDDKYKYDYHYDTNSK--RYTF-PCLDTNLVGIV 535
A A + +D L D + P TDD KY Y + K +YTF PC G +
Sbjct: 457 ADKADDSSKLDVHAIAELQDKQKLPATDDSPKYVYTAEGTGKSAKYTFQPC-----TGKI 511
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
+ AIR + + + G++ D+TN YA GGQI D G +L +
Sbjct: 512 V----------AIRSKKQFVN----GVNAGDLCGIVLDRTNFYAEQGGQIYDTG--FLQH 555
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVS-SFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E+ + + E+ G +VH G + + + KV L ++++D R+ M+ HT +H+
Sbjct: 556 VENEDVEFAVTEVHLQGGFVVHIGRLAAGTLKVGDEL--KLQIDETRRVAVMQNHTGTHV 613
Query: 655 LNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN ALR+VL+ Q+ V + DF+ ++ V E+ ++++ V
Sbjct: 614 LNYALRKVLSADADQRGSLVAPERMRFDFA-SNRPMTAQEVKQAEEAAVELVSRNGPVYA 672
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDIS----------DKENVI--SREPCCGTHV 761
+ S+ + L + E YPD V ++ I D+ + + S E C GTH+
Sbjct: 673 KDSSLSQAKAVKGLRAVFNETYPDPVRVVSIGVSVEDLLANPDRGDALNTSVEFCGGTHL 732
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST 805
N GHI + ++ G+R I LTG + A + +HL +
Sbjct: 733 QNAGHIGDFVIAQEEAIAKGIRRIMALTGTEAAKATKRAEHLES 776
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLT-----PAPYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM Q+K +FLG A + R NSQKCIR GGKHNDL G+D
Sbjct: 33 IPHDDPTLLFANAGMNQYKPIFLGTVDPNTEAAKWKRTVNSQKCIRAGGKHNDLDDVGKD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF D++K++ C A EFLTK L DRLY T+
Sbjct: 93 VYHHTFFEMLGNWSFGDFFKKEICAWAWEFLTK-EFGLAEDRLYVTY 138
>gi|391342386|ref|XP_003745501.1| PREDICTED: alanine--tRNA ligase, cytoplasmic-like isoform 3
[Metaseiulus occidentalis]
Length = 977
Score = 444 bits (1142), Expect = e-121, Method: Compositional matrix adjust.
Identities = 280/827 (33%), Positives = 430/827 (51%), Gaps = 88/827 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLT-----P 66
L + +R+ F+++F HT V SS ++P+ D ++ F N+GM Q+K +FLG
Sbjct: 4 LFASEVRTRFIEFFQKKYQHTFVPSSCVIPHDDPTLLFANAGMNQYKPIFLGTVDPNTEA 63
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A + R NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF D++K++ C A EFLT
Sbjct: 64 AKWKRTVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDFFKKEICAWAWEFLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K L DRLY TYFGG+ + GL D E + IWL LGVP DHI MK NFWEMG TG
Sbjct: 124 KE-FGLAEDRLYVTYFGGNPEAGLEPDNECKGIWLALGVPEDHILPGSMKDNFWEMGETG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIH+D G ++A VN D D++EIWN+VFI + R + ++ PL K ++DTG
Sbjct: 183 PCGPCSEIHFDRIGGRNAA-HLVNMDDPDVLEIWNLVFIQYNREADSSLRPLPKQHVDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++QNK S YDTD+F+P+ + I+K +G + Y + +D +YR+L+D+
Sbjct: 242 MGFERLVSVIQNKRSNYDTDVFVPIFDAIQKSTGVRAYTGKVGAEDVDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R +T+AL+D PD + LR ++R A+ + + K G + L + +LGD
Sbjct: 302 ARTLTIALSDGGRPDNVGRGYVLRRILRRAIRYATEKMNAKPG-MFAGLVPVVVGLLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + + I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDTVMEIINEEETQF--------------LKT--------------LSRGRRL 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE--LKE 481
LTK +++ + G++A+ LYDTYG ++ Q + + + +E+ L
Sbjct: 393 LTKAVSKIEKGGLLPGEVAWRLYDTYGFPVDLTQLMVEESGIFVDSAGYEKAKQAAILAS 452
Query: 482 RSKAKAASNVPDID------LMDLKHFPVTDDKYKYDYHYDTNSK--RYTF-PCLDTNLV 532
+ A A + +D L D + P TDD KY Y + K +YTF PC
Sbjct: 453 QGGADKADDSSKLDVHAIAELQDKQKLPATDDSPKYVYTAEGTGKSAKYTFQPC-----T 507
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
G ++ AIR + + + G++ D+TN YA GGQI D G +
Sbjct: 508 GKIV----------AIRSKKQFVN----GVNAGDLCGIVLDRTNFYAEQGGQIYDTG--F 551
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVS-SFKVTPGLTSRVEVDARMRLGCMRAHTT 651
L + E+ + + E+ G +VH G + + + KV L ++++D R+ M+ HT
Sbjct: 552 LQHVENEDVEFAVTEVHLQGGFVVHIGRLAAGTLKVGDEL--KLQIDETRRVAVMQNHTG 609
Query: 652 SHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ 710
+H+LN ALR+VL+ Q+ V + DF+ ++ V E+ ++++
Sbjct: 610 THVLNYALRKVLSADADQRGSLVAPERMRFDFA-SNRPMTAQEVKQAEEAAVELVSRNGP 668
Query: 711 VDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS----------DKENVI--SREPCCG 758
V + S+ + L + E YPD V ++ I D+ + + S E C G
Sbjct: 669 VYAKDSSLSQAKAVKGLRAVFNETYPDPVRVVSIGVSVEDLLANPDRGDALNTSVEFCGG 728
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST 805
TH+ N GHI + ++ G+R I LTG + A + +HL +
Sbjct: 729 THLQNAGHIGDFVIAQEEAIAKGIRRIMALTGTEAAKATKRAEHLES 775
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLT-----PAPYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM Q+K +FLG A + R NSQKCIR GGKHNDL G+D
Sbjct: 32 IPHDDPTLLFANAGMNQYKPIFLGTVDPNTEAAKWKRTVNSQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF D++K++ C A EFLTK L DRLY T+
Sbjct: 92 VYHHTFFEMLGNWSFGDFFKKEICAWAWEFLTK-EFGLAEDRLYVTY 137
>gi|345495930|ref|XP_003427602.1| PREDICTED: LOW QUALITY PROTEIN: alanyl-tRNA synthetase,
cytoplasmic-like [Nasonia vitripennis]
Length = 1152
Score = 444 bits (1142), Expect = e-121, Method: Compositional matrix adjust.
Identities = 287/820 (35%), Positives = 409/820 (49%), Gaps = 112/820 (13%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
+K IR +++D+F ++ H V SS +P+ D ++ F N+GM QFK +FLG A
Sbjct: 6 AKDIRQAYIDFF-KSKDHEYVHSSSTIPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDMAK 64
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
+ RV NSQKC+R GGKHNDL G+D YHHTFFEM+GNWSF DY+K++ C A EFLT+
Sbjct: 65 WVRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICEWAWEFLTQK 124
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
++LP DRLY TYFGG ++ L DEE ++ WL LGVP H+ MK NFWEMG TGPC
Sbjct: 125 -LNLPADRLYVTYFGGDEKSNLKPDEECKNFWLSLGVPESHVLPGSMKDNFWEMGETGPC 183
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G SE+HYD G +A VN D D++EIWN+VFI + R + PL K +ID GLG
Sbjct: 184 GPCSELHYDRIGGREAA-HLVNMDDPDVLEIWNLVFIQYNREQNGELQPLPKKHIDCGLG 242
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
ERLV+++QNK S YDTDLF PL E I+K +GA Y ++ +D +YR+L+D++R
Sbjct: 243 LERLVSVIQNKRSNYDTDLFTPLFEAIQKGTGAPAYQGRVGNDDKDGIDMAYRVLADHAR 302
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
IT+ALAD PD T + +R ++R A+ + + + G L + E+LGDV+P
Sbjct: 303 TITIALADGGVPDNTGRGYVIRRILRRAVRYATEKLNAQPG-FFATLINVVVELLGDVFP 361
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ I I+ EE F +KT L G L
Sbjct: 362 EVKRDPQSIIDIVNEEEVQF--------------LKT--------------LSRGRNLLN 393
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKERS 483
+ +A+ S + GD+A+ LYDTYG ++ Q +A K LT+ A+E+ KL + +
Sbjct: 394 RTIAKLESTKVVPGDVAWRLYDTYGFPVDLTQLMAEEKGLTIDVAAYEEAKKLAIIASQG 453
Query: 484 KAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSK--RYTF-PCLDTNLVGIV 535
KA ++ ++D+ + K TDD KY+Y K YTF PC T L
Sbjct: 454 KAGGVNDQINLDVHAITELQNKGVKTTDDSPKYNYKVAKTEKYAEYTFAPCTGTVL---- 509
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
DK + +SG VG++ D+TN YA GGQI D G +L
Sbjct: 510 ----ALRKDKTFVDEVKSGDE-----------VGVLLDQTNFYAEQGGQIYDEG--FLVK 552
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
E+ ++ + + G ++H G V + G + VD R M HT +H L
Sbjct: 553 VDDESTEIRVTNVQVRGGYVLHIG-TVGEGTLKKGDKLYLNVDTSRRRLIMSNHTATHAL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL T Y + +S A+ + I
Sbjct: 612 NHALRSVL-GTDXXXXXXXXXXXXXXXXXYAK----ESPLAIARTIQG------------ 654
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFN 763
L + GE YPD V ++ + + ++P C GTH+
Sbjct: 655 -----------LRAMFGETYPDPVRVVSMGVTVEELEKDPLSPAGAKTSVEFCGGTHLHR 703
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
TGHI + ++ G+R I LTG + A++ + L
Sbjct: 704 TGHIGDFVIASEEAIAKGIRRIVALTGPEASKALKKAELL 743
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 76/107 (71%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG A + RV NSQKCIR GGKHNDL G+D
Sbjct: 31 IPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDMAKWVRVVNSQKCIRAGGKHNDLDDVGKD 90
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEM+GNWSF DY+K++ C A EFLT+ ++LP DRLY T+
Sbjct: 91 VYHHTFFEMMGNWSFGDYFKKEICEWAWEFLTQ-KLNLPADRLYVTY 136
>gi|391342384|ref|XP_003745500.1| PREDICTED: alanine--tRNA ligase, cytoplasmic-like isoform 2
[Metaseiulus occidentalis]
Length = 975
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 280/824 (33%), Positives = 429/824 (52%), Gaps = 88/824 (10%)
Query: 15 KSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLT-----PAPY 69
K +R+ F+++F HT V SS ++P+ D ++ F N+GM Q+K +FLG A +
Sbjct: 5 KEVRTRFIEFFQKKYQHTFVPSSCVIPHDDPTLLFANAGMNQYKPIFLGTVDPNTEAAKW 64
Query: 70 PRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP 129
R NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF D++K++ C A EFLTK
Sbjct: 65 KRTVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDFFKKEICAWAWEFLTKE- 123
Query: 130 VSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
L DRLY TYFGG+ + GL D E + IWL LGVP DHI MK NFWEMG TGPCG
Sbjct: 124 FGLAEDRLYVTYFGGNPEAGLEPDNECKGIWLALGVPEDHILPGSMKDNFWEMGETGPCG 183
Query: 190 YSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
SEIH+D G ++A VN D D++EIWN+VFI + R + ++ PL K ++DTG+GF
Sbjct: 184 PCSEIHFDRIGGRNAA-HLVNMDDPDVLEIWNLVFIQYNREADSSLRPLPKQHVDTGMGF 242
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERLV+++QNK S YDTD+F+P+ + I+K +G + Y + +D +YR+L+D++R
Sbjct: 243 ERLVSVIQNKRSNYDTDVFVPIFDAIQKSTGVRAYTGKVGAEDVDGIDMAYRVLADHART 302
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
+T+AL+D PD + LR ++R A+ + + K G + L + +LGD +PE
Sbjct: 303 LTIALSDGGRPDNVGRGYVLRRILRRAIRYATEKMNAKPG-MFAGLVPVVVGLLGDAFPE 361
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
++ + + I+ EE F +KT L G + LTK
Sbjct: 362 LKKDPDTVMEIINEEETQF--------------LKT--------------LSRGRRLLTK 393
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE--LKERSK 484
+++ + G++A+ LYDTYG ++ Q + + + +E+ L +
Sbjct: 394 AVSKIEKGGLLPGEVAWRLYDTYGFPVDLTQLMVEESGIFVDSAGYEKAKQAAILASQGG 453
Query: 485 AKAASNVPDID------LMDLKHFPVTDDKYKYDYHYDTNSK--RYTF-PCLDTNLVGIV 535
A A + +D L D + P TDD KY Y + K +YTF PC G +
Sbjct: 454 ADKADDSSKLDVHAIAELQDKQKLPATDDSPKYVYTAEGTGKSAKYTFQPC-----TGKI 508
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
+ AIR + + + G++ D+TN YA GGQI D G +L +
Sbjct: 509 V----------AIRSKKQFVN----GVNAGDLCGIVLDRTNFYAEQGGQIYDTG--FLQH 552
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVS-SFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E+ + + E+ G +VH G + + + KV L ++++D R+ M+ HT +H+
Sbjct: 553 VENEDVEFAVTEVHLQGGFVVHIGRLAAGTLKVGDEL--KLQIDETRRVAVMQNHTGTHV 610
Query: 655 LNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN ALR+VL+ Q+ V + DF+ ++ V E+ ++++ V
Sbjct: 611 LNYALRKVLSADADQRGSLVAPERMRFDFA-SNRPMTAQEVKQAEEAAVELVSRNGPVYA 669
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDIS----------DKENVI--SREPCCGTHV 761
+ S+ + L + E YPD V ++ I D+ + + S E C GTH+
Sbjct: 670 KDSSLSQAKAVKGLRAVFNETYPDPVRVVSIGVSVEDLLANPDRGDALNTSVEFCGGTHL 729
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST 805
N GHI + ++ G+R I LTG + A + +HL +
Sbjct: 730 QNAGHIGDFVIAQEEAIAKGIRRIMALTGTEAAKATKRAEHLES 773
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLT-----PAPYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM Q+K +FLG A + R NSQKCIR GGKHNDL G+D
Sbjct: 30 IPHDDPTLLFANAGMNQYKPIFLGTVDPNTEAAKWKRTVNSQKCIRAGGKHNDLDDVGKD 89
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF D++K++ C A EFLTK L DRLY T+
Sbjct: 90 VYHHTFFEMLGNWSFGDFFKKEICAWAWEFLTK-EFGLAEDRLYVTY 135
>gi|195155623|ref|XP_002018701.1| GL25810 [Drosophila persimilis]
gi|194114854|gb|EDW36897.1| GL25810 [Drosophila persimilis]
Length = 966
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 276/817 (33%), Positives = 414/817 (50%), Gaps = 85/817 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +K +R ++L +F Q H V SS +P D ++ F N+GM QFK +FLG
Sbjct: 4 LTAKEVRDAYLGFF-KEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEM 62
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
+ + RV N+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A EFLT
Sbjct: 63 SKWVRVCNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICTWAWEFLT 122
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ LP DRLY TYFGG + GL D E + +WL+LG+ +HI MK NFWEMG TG
Sbjct: 123 NR-LHLPKDRLYVTYFGGDEASGLEPDLECKQLWLDLGLKPEHILPGSMKDNFWEMGETG 181
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+H+D G S VN D D++EIWN+VFI + R S ++ L K +ID G
Sbjct: 182 PCGPCSELHFDRIG-GRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCG 240
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++QNK S YDTDLF+PL E I+ +GA Y + +D +YR+L+D+
Sbjct: 241 MGFERLVSVIQNKRSNYDTDLFVPLFEAIQAGTGAPAYQGRVGADDVDGIDMAYRVLADH 300
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K G L + ++LGD
Sbjct: 301 ARTITIALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFGTLVNTVVDLLGDA 359
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I I+ EE F +KT L G
Sbjct: 360 FPEVKKDPQHIIDIINEEELQF--------------LKT--------------LTRGRNL 391
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + + + S + I GD+A+ LYDTYG ++ Q +A K L + +E S
Sbjct: 392 LNRTIEKLGSQSIIPGDVAWRLYDTYGFPVDLTQLMAEEKSLEIDMAGYEAAKQNSYVLS 451
Query: 484 KAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNSK--RYTFPCLDTNLVGI 534
+ K AS + +I+L + + P T+D +KY Y + + Y + + +V +
Sbjct: 452 QGKGASKIEEINLDVHAISQLQEQGVPPTNDSFKYKYEAVSEERDSAYNYQECTSKIVAL 511
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+Q ++ + G++ DKTN YA +GGQI D G L
Sbjct: 512 RFENQFVN------------------EISNGQKAGIVLDKTNFYAESGGQIFDQGA--LV 551
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E + + + + G I+H G V + KV L ++ +D R M+ H+ +H
Sbjct: 552 KLNDEANEFLVDRVYNRGGYILHIGVVEGTLKVGDEL--QLHIDEERRWLTMKNHSATHA 609
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN L +VL T QK V ++ DF+ ++++ VA E+ D++ V +
Sbjct: 610 LNHCLLQVLGKDTEQKGSLVVPEKLRFDFNTKA-AMTIEQVAKTEQLTKDMVYKNVPIYA 668
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHV 761
+ + + + L + E+YPD V +I + + + P C GTH+
Sbjct: 669 KESKLALAKRIRGLRSVFDEVYPDPVRVISFGVPVDELEQNPDAEAGEQTSVEFCGGTHL 728
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
+GHI + ++ G+R I LTG + A++
Sbjct: 729 RRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKAIK 765
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG + + RV N+QKCIR GGKHNDL G+D
Sbjct: 31 IPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKWVRVCNTQKCIRAGGKHNDLDDVGKD 90
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A EFLT + LP DRLY T+
Sbjct: 91 VYHHTFFEMLGNWSFGDYFKKEICTWAWEFLTN-RLHLPKDRLYVTY 136
>gi|327281303|ref|XP_003225388.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Anolis
carolinensis]
Length = 969
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 285/823 (34%), Positives = 416/823 (50%), Gaps = 87/823 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+++F Q HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFINFFVENQ-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+ AL+ LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKFALDLLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K +P++RLY TYFGG++ GL D + + IWL+LG+P D I MK NFWEMG TG
Sbjct: 124 KE-FGIPIERLYVTYFGGNEAAGLQPDLDCKQIWLDLGLPEDRILPGSMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
PCG SE+HYD + G +S L VN D +++EIWN+VFI R + T+ PL K IDT
Sbjct: 183 PCGPCSEMHYDRIGGRDASHL--VNQDDPNVLEIWNLVFIQFNREADGTLKPLPKKSIDT 240
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ERLV++LQNK S YDTDLF+P E I+K +G +PY + +D +YR+L+D
Sbjct: 241 GMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGCRPYTGQVGEDDADGIDMAYRVLAD 300
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
++R ITVAL+D PD T + LR ++R A+ + + +G L + E LG
Sbjct: 301 HARTITVALSDGGRPDNTGRGYVLRRILRRAVRYAHEKLNAPRG-FFATLVDVVVESLGG 359
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE++ ++ I+ EE F +KT L G +
Sbjct: 360 AFPELKKDPEMVKDIINEEEVQF--------------LKT--------------LNRGRR 391
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L +++ I GD A+ LYDTYG ++ +A K L + E FE++ + +
Sbjct: 392 ILDRKIQSLGDNKVIPGDTAWLLYDTYGFPVDLTGLIAEEKGLKVDMEGFEEERKAAQLK 451
Query: 483 SKAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
S+ K + D+ ++D+ K TDD KY+Y D S Y F V
Sbjct: 452 SQGKGGGD-EDLIILDIYAIEELRSKGLKATDDSLKYNYASDP-SGTYEFQS-PVATVKA 508
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--VAY 592
+ ++VF + +G G++ D+T YA GGQI D G V
Sbjct: 509 LRREKVF------VEEVSTGQE-----------CGIVLDQTCFYAEQGGQIYDEGYLVKE 551
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+++ + + + G ++H G V S KV G T R+ +D R M HT +
Sbjct: 552 EDEGSEDKTEFTVKNVQVRGGYVLHVGTVYGSLKV--GDTVRLYIDEPRRRPVMSNHTAT 609
Query: 653 HLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
H+LN ALR VL Q+ V D DF+ G +S + E +N +I V
Sbjct: 610 HILNFALRAVLGEADQRGSLVAPDRLRFDFTAKG-AMSTQEIKKAEAIVNQMIQEAKVVY 668
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKEN----VISREPCCGTH 760
+ + + L + E YPD V ++ I +D N + S E C GTH
Sbjct: 669 AKECALAAAKAIQGLRAVFDETYPDPVRVVSIGIPIEDMLADPSNAAGAITSVEFCGGTH 728
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ N+ H ++ ++ G+R I +TG ++ A+ + L
Sbjct: 729 LQNSSHAGHFVIVSEEAIAKGIRRIVAVTGAEAQKALRKVESL 771
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+ AL+ LTK +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKFALDLLTK-EFGIPIERLYVTY 137
>gi|242798694|ref|XP_002483222.1| alanyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
10500]
gi|218716567|gb|EED15988.1| alanyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
10500]
Length = 1002
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 275/815 (33%), Positives = 426/815 (52%), Gaps = 90/815 (11%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP---- 66
+ ++ +RS F+DYF +GHT V SS +VP+ D ++ F N+GM Q+K++FLG
Sbjct: 51 QWTAERVRSEFIDYF-KERGHTFVPSSSVVPHADPTLLFANAGMNQYKSIFLGTVDPQSD 109
Query: 67 -APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
A R NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A + E L
Sbjct: 110 FAHLKRAVNSQKCIRAGGKHNDLDDVGKDNYHHTFFEMLGNWSFGDYFKKEAITYSWELL 169
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
TK L RLY TYF G++ GL D E ++IW +GVP DHI MK NFWEMG
Sbjct: 170 TKV-FGLDPSRLYVTYFEGNESGGLEPDLEAKEIWRNVGVPEDHILPGNMKDNFWEMGDQ 228
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG SEIHYD G ++A + VN D +++EIWN VFI + R + ++ PL ++DT
Sbjct: 229 GPCGPCSEIHYDRIGGRNAA-SLVNQDDPNVLEIWNNVFIQYNREADRSLRPLPNKHVDT 287
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV++LQ+K+S YDTD+F+PL TI++++GA Y F + +DT+YR+++D
Sbjct: 288 GMGFERLVSVLQDKSSNYDTDVFMPLFRTIQEITGAPEYQGRFGAEDADGVDTAYRVVAD 347
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R +T A++D +P+ + +R V+R + F V+ G ++ + E +G
Sbjct: 348 HVRTLTFAISDGAYPNNEGRGYVIRRVLRRGARYARKYFNVEIGSFFSKIVPTLVEQMGV 407
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
++PEI++ ++ +L EE F K L + + + E +
Sbjct: 408 MFPEIKEKQAEVMEVLNEEEVSFS----------KTLDRGEKQFENY------------- 444
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
Q A+ + ++ G + LYDT+G ++ Q +A + L++ FE+ + KE
Sbjct: 445 ---AQQAKSKGLNKLHGADVWRLYDTFGFPVDLTQIMAEERGLSIDEAEFEEARLKAKEA 501
Query: 483 SKA--KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
SK KAA+ +D+ DL P TDD K+D P +++ + I
Sbjct: 502 SKGQKKAAAETVKLDVHDLGKLDNMSDVPKTDDSSKFDS-----------PRIESIVKAI 550
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
K+ I+ ++ D + E +G+I D+TN YA GGQ +D G+ +
Sbjct: 551 YYS-------KNFIQ-----STADVPEGEQ---IGVILDRTNFYAEQGGQENDTGIISID 595
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+ +E+G++ S G ++H G + + G + E D R R HT +H+
Sbjct: 596 GKAE----LEVGDVQSYGGYVLHTG-FIKYGSLAVGDSVMCEFDDRRRQPIRNNHTGTHI 650
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN ALR +L QK V +++ DFS + +S + +E+ + I V
Sbjct: 651 LNFALREILGDGINQKGSLVAAEKLRFDFS-HKAAVSDKELDQIERKSTEYIRQNCGVYS 709
Query: 714 RHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISD-KENVISREPCCGTHV 761
+ + + +T + + GE YPD + IL D+ D + N IS E C GTHV
Sbjct: 710 KEVPLATAREITGVRAVFGETYPDPVRVVSVGVEVEEILKDVKDPRWNDISIEFCGGTHV 769
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
+G I ++ G+R I +TGD + A
Sbjct: 770 SRSGEIRELVILEESGIAKGIRRIIAVTGDEALQA 804
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 79 VPHADPTLLFANAGMNQYKSIFLGTVDPQSDFAHLKRAVNSQKCIRAGGKHNDLDDVGKD 138
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A + E LTK L RLY T+
Sbjct: 139 NYHHTFFEMLGNWSFGDYFKKEAITYSWELLTK-VFGLDPSRLYVTY 184
>gi|299115131|emb|CBN75498.1| Alanyl-tRNA Synthetase [Ectocarpus siliculosus]
Length = 1122
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 282/838 (33%), Positives = 417/838 (49%), Gaps = 85/838 (10%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----R 71
+R +F+D+F + + HT SSP+VP D S+ F N+GM QFK VFLG T P R
Sbjct: 157 VRQTFIDHFKSKREHTFYPSSPVVPVNDPSLLFANAGMNQFKPVFLGQTDPSSPLAGLKR 216
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL GRD YHHTFFEMLG WSF DY+K +A E L +
Sbjct: 217 AVNSQKCIRAGGKHNDLDDVGRDVYHHTFFEMLGTWSFGDYFKEEAVEWGFEALNE-VFG 275
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY TYFGG ++ GL D ETRD+WL++ +P D + K NFWEMG GPCG
Sbjct: 276 LPADRLYATYFGGDEELGLAPDLETRDLWLKV-LPEDRVMPGDRKDNFWEMGDVGPCGPC 334
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SE+H+D G ++A + VN D D+IEIWN+VF+ R A + L ++DTGLG ER
Sbjct: 335 SELHFDRIGGRNAA-SLVNMDDPDVIEIWNLVFMQFNRDEAGNLKLLPAKHVDTGLGLER 393
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV+ILQ+K S YDTD+F PL + I+ V+G PY + DT+YR+++D++R ++
Sbjct: 394 LVSILQDKRSNYDTDVFGPLFDAIQDVTGCPPYEGKVGDEDVGLKDTAYRVVADHARALS 453
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A+ D P + LR ++R A+ +DV K G K + +AE GD+YPE++
Sbjct: 454 FAITDGAVPANDGRGYVLRRILRRAVRYGQDVLKAPPGFFQKIVPVVVAE-FGDMYPELR 512
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+ + I+ EE F ++ + +K +K + + Q
Sbjct: 513 EKEAFVMEIIKEEEEAFSSMLERGIKHFKEVEEEQ------------------------- 547
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA- 487
R S I GD AF LYD+ G ++ Q +A +T+ E F ++ K RSK
Sbjct: 548 -RGKSSNTIPGDTAFFLYDSMGFPLDLTQVMAEEVGMTVDEEGFANEMAAQKARSKEAEA 606
Query: 488 ------------ASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
A + + + TDD+ KY + T +K +V +
Sbjct: 607 ARRAAGAGVRAMALGADETSRLAEEGVKPTDDEAKYTWSTTTGNK----------VVALF 656
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--VAYL 593
G+ + + + AS D VG++ D T Y+ AGGQ+ D G V
Sbjct: 657 DGETLSTTASQS--GGTAAASSDDATT-----VGILLDSTPFYSEAGGQVSDSGKLVVSA 709
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
++G +E+ ++ G +H G +VS ++ G + R EVD R HT +H
Sbjct: 710 GGEDGDDGVIEVADVRMFGGFALHVGRLVSG-SLSVGDSVRCEVDYDRRRKVAPNHTMTH 768
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
LN ALR+ + QK V ++ DFS +G+ L+ + E + +I + +V
Sbjct: 769 ALNYALRKAVDEGVDQKGSLVTDEKLRFDFS-HGKALTGPQLEESEAIVQRIIQEEKEVY 827
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTH 760
+ + SE + L + GE+YPD V ++ + ++++P C GTH
Sbjct: 828 NQVLPLSEAKSIFGLRAVFGEVYPDPVRVVSVGFPVEDMAKDPSREEWATSSVEFCGGTH 887
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNI 818
V NT E+ + + GVR I +TG ++K AV G+ L A L G +
Sbjct: 888 VGNTREAEAFVITEETAVAKGVRRITAITGSAAKEAVAAGEVLKLRAEEVSSLKGGEL 945
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 67/107 (62%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P D S+ F N+GM QFK VFLG T P R NSQKCIR GGKHNDL GRD
Sbjct: 180 VPVNDPSLLFANAGMNQFKPVFLGQTDPSSPLAGLKRAVNSQKCIRAGGKHNDLDDVGRD 239
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG WSF DY+K +A E L + LP DRLY T+
Sbjct: 240 VYHHTFFEMLGTWSFGDYFKEEAVEWGFEALNE-VFGLPADRLYATY 285
>gi|125987341|ref|XP_001357433.1| GA12250 [Drosophila pseudoobscura pseudoobscura]
gi|54645764|gb|EAL34502.1| GA12250 [Drosophila pseudoobscura pseudoobscura]
Length = 966
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 275/817 (33%), Positives = 414/817 (50%), Gaps = 85/817 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +K +R ++L +F Q H V SS +P D ++ F N+GM Q+K +FLG
Sbjct: 4 LTAKEVRDAYLGFF-KEQKHIYVHSSSTIPLDDPTLLFANAGMNQYKPIFLGTADPNSEM 62
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
+ + RV N+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A EFLT
Sbjct: 63 SKWVRVCNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICTWAWEFLT 122
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ LP DRLY TYFGG + GL D E + +WL+LG+ +HI MK NFWEMG TG
Sbjct: 123 NR-LHLPKDRLYVTYFGGDEASGLEPDLECKQLWLDLGLKPEHILPGSMKDNFWEMGETG 181
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+H+D G S VN D D++EIWN+VFI + R S ++ L K +ID G
Sbjct: 182 PCGPCSELHFDRIG-GRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCG 240
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++QNK S YDTDLF+PL E I+ +GA Y + +D +YR+L+D+
Sbjct: 241 MGFERLVSVIQNKRSNYDTDLFVPLFEAIQAGTGAPAYQGRVGADDVDGIDMAYRVLADH 300
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K G L + ++LGD
Sbjct: 301 ARTITIALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFGTLVNTVVDLLGDA 359
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I I+ EE F +KT L G
Sbjct: 360 FPEVKKDPQHIIDIINEEELQF--------------LKT--------------LTRGRNL 391
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + + + S + I GD+A+ LYDTYG ++ Q +A K L + +E S
Sbjct: 392 LNRTIEKLGSQSIIPGDVAWRLYDTYGFPVDLTQLMAEEKSLEIDMAGYEAAKQNSYVLS 451
Query: 484 KAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNSK--RYTFPCLDTNLVGI 534
+ K AS + +I+L + + P T+D +KY Y + + Y + + +V +
Sbjct: 452 QGKGASKIEEINLDVHAISQLQEQGVPPTNDSFKYKYEAVSEERDSAYNYQECTSKIVAL 511
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+Q ++ + G++ DKTN YA +GGQI D G L
Sbjct: 512 RFENQFVN------------------EISNGQKAGIVLDKTNFYAESGGQIFDQGA--LV 551
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E + + + + G I+H G V + KV L ++ +D R M+ H+ +H
Sbjct: 552 KLNDEANEFLVDRVYNRGGYILHIGVVEGTLKVGDEL--QLHIDEERRWLTMKNHSATHA 609
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN L +VL T QK V ++ DF+ ++++ VA E+ D++ V +
Sbjct: 610 LNHCLLQVLGKDTEQKGSLVVPEKLRFDFNTKA-AMTIEQVAKTEQLTKDMVYKNVPIYA 668
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHV 761
+ + + + L + E+YPD V +I + + + P C GTH+
Sbjct: 669 KESKLALAKRIRGLRSVFDEVYPDPVRVISFGVPVDELEQNPDAEAGEQTSVEFCGGTHL 728
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
+GHI + ++ G+R I LTG + A++
Sbjct: 729 RRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKAIK 765
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM Q+K +FLG + + RV N+QKCIR GGKHNDL G+D
Sbjct: 31 IPLDDPTLLFANAGMNQYKPIFLGTADPNSEMSKWVRVCNTQKCIRAGGKHNDLDDVGKD 90
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A EFLT + LP DRLY T+
Sbjct: 91 VYHHTFFEMLGNWSFGDYFKKEICTWAWEFLTN-RLHLPKDRLYVTY 136
>gi|340370458|ref|XP_003383763.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like isoform 2
[Amphimedon queenslandica]
Length = 966
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 273/809 (33%), Positives = 419/809 (51%), Gaps = 90/809 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +K IR F+D+F ++ HT V SS +P D ++ F N+GM QFK +F G
Sbjct: 5 LTAKDIRRMFIDFF-RSKDHTFVPSSSTIPVDDPTLLFTNAGMNQFKPIFQGTVDPSSDF 63
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A R ANSQKC+R GGKHNDL G+D+YHHTFFEM+GNWSF DY+K +A +MA FLT
Sbjct: 64 ATLSRAANSQKCIRAGGKHNDLDDVGKDTYHHTFFEMMGNWSFGDYFKEEAIKMAWSFLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ + LP DRLY TYFGG ++ LP D+E ++IWL G+P + + +K NFWEMG G
Sbjct: 124 ES-LKLPKDRLYVTYFGGDEKLKLPADDECKEIWLNTGLPPERVLPFSVKDNFWEMGEVG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G A RVN D +++E+WN+VF+ + S +I PL KN +DTG
Sbjct: 183 PCGPCSEIHYDRIGGRFVA-DRVNMDDPNVLELWNVVFMQFNKESDGSIKPLPKNNVDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LG ER+V+++Q K S YDTDLFLP+ + IE +G++ Y + +D +YR+++D+
Sbjct: 242 LGLERIVSVVQGKFSNYDTDLFLPIFDAIEAKTGSRSYTGKIGAEDVDGVDMAYRVVADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R +T+A++D PDAT + LR ++R + + K G L + ++LG+
Sbjct: 302 IRTLTIAISDGGKPDATGRGYVLRRILRRGVRYITEKLNAKPGTFAS-LVPTVLDVLGEA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PEI + + EE + F +KT L G +
Sbjct: 361 FPEITKDPEMVMDTINEEEKQF--------------LKT--------------LSHGKRM 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE--QKLNELKE 481
++L R + GD+A+ LYDTYG ++ Q +A +++T+ E +E + + +++E
Sbjct: 393 FERKL-RKIENNLLPGDVAWRLYDTYGFPVDLTQLMAEERQVTVDMEGYEKAKAMAQVRE 451
Query: 482 RSKAKAASNVPDIDLMDLKHF-----PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ +D+ + H P T+D KYDY D S Y F + +++ +
Sbjct: 452 EEQLIIIDESLQLDVHAISHLQSKGVPPTNDSSKYDYSSD-ESGNYKFQSCEGSVIAL-- 508
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
+K + SG VG++ DKT YA GGQI D G Y+
Sbjct: 509 -----RYNKEFVDEVSSGQV-----------VGVLTDKTCFYAEQGGQIYDEG--YIVKI 550
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+E + + ++ G ++H G++ + +V G + +D R M+ HT +H+LN
Sbjct: 551 GEEETEFIVRDVQVRGGYVLHVGSIEGTLRV--GDKVNMTIDGDRRSDVMKNHTGTHVLN 608
Query: 657 AALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALRRV+ QK V D DFS G + D + E+ +VI V +
Sbjct: 609 FALRRVIGEADQKGSLVAPDRLRFDFSAKG-AMKTDQIKKCEEVALEVIKASHPV---YA 664
Query: 717 RASELPF---LTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHV 761
+ + LP + L + E+YPD V ++ I + + +P C GTH+
Sbjct: 665 QETPLPVAKEIQGLRAVFDEVYPDPVRVLSIGVPVDKLVEDPSGPWAINYSVEFCGGTHL 724
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
++GHI+S ++ ++ G+R I LTG
Sbjct: 725 RSSGHIQSFAIVTEEAIAKGIRRIVALTG 753
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +F G A R ANSQKCIR GGKHNDL G+D
Sbjct: 32 IPVDDPTLLFTNAGMNQFKPIFQGTVDPSSDFATLSRAANSQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEM+GNWSF DY+K +A +MA FLT+ + LP DRLY T+
Sbjct: 92 TYHHTFFEMMGNWSFGDYFKEEAIKMAWSFLTE-SLKLPKDRLYVTY 137
>gi|169154547|emb|CAQ13591.1| novel protein similar to vertebrate alanyl-tRNA synthetase (AARS)
[Danio rerio]
Length = 963
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 291/839 (34%), Positives = 419/839 (49%), Gaps = 84/839 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + H V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAAQIREKFIDFFRRHE-HQYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 ARLRRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKHLACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG GL D E + IWL+LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYFGGHADAGLEPDLECKQIWLDLGMEESRILPGSMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI R S + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNMDDPNVLEIWNLVFIQFNRESETVLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+ Y + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARAYTGKVGAEDTDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+AL+D PD T + LR ++R A+ S + ++G L + E LGD
Sbjct: 302 ARTITIALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQRG-FFASLVDVVVESLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELRKDPDMVKDIINEEEAQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L +++ T I GD A+ LYDTYG ++ +A + + + AFE++ + +S
Sbjct: 393 LDRKIQSLGDSTTIPGDTAWLLYDTYGFPLDLTALIAEERGMGVDLLAFEEEKKAAQLKS 452
Query: 484 KAKAAS-------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K + ++ ID + K TDD KY Y D N Y F VG V+
Sbjct: 453 QGKGSGDEDHIMLDIYAIDELRNKGVAATDDSPKYKYTSDDNGN-YEF----EQAVGTVL 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
A+R R +D + G++ DKT+ YA GGQ D G N
Sbjct: 508 ----------ALRRER--MFVDEVITGQE--CGVLLDKTSFYAEQGGQSFDEGYMLREND 553
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+ E+ V+ ++ G ++H G V + KV LT + VD R M HT +H+LN
Sbjct: 554 SAEDFTVKNTQVRG--GYVLHIGTVYGTLKVGDRLT--LHVDEARRRPIMSNHTATHILN 609
Query: 657 AALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
LR VL Q+ V D DF+ G +S D V E+ +IA+ V
Sbjct: 610 YGLRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTDEVRRTEEIAAAMIADAKGVYALDA 668
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFNT 764
+ + L + E YPD V ++ I S ++ S E C GTH+ N+
Sbjct: 669 PLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVEELLADPNSPAGSLTSIEFCGGTHLQNS 728
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAA-SFSQILNVGNIPYGD 822
H ++ ++ G+R I +TG ++ A L + + ++ + +IP D
Sbjct: 729 SHAAPFVIVSEEAIAKGIRRIVAVTGAEAQKAQRKADALKLSLDALAEKVKAQSIPNKD 787
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMARLRRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKHLACKMALELLTQ-EFGIPIERLYVTY 137
>gi|169154546|emb|CAQ13590.1| novel protein similar to vertebrate alanyl-tRNA synthetase (AARS)
[Danio rerio]
Length = 988
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 291/839 (34%), Positives = 419/839 (49%), Gaps = 84/839 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + H V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 30 LTAAQIREKFIDFFRRHE-HQYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 88
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 89 ARLRRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKHLACKMALELLT 148
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG GL D E + IWL+LG+ I MK NFWEMG TG
Sbjct: 149 QE-FGIPIERLYVTYFGGHADAGLEPDLECKQIWLDLGMEESRILPGSMKDNFWEMGDTG 207
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI R S + PL K IDTG
Sbjct: 208 PCGPCSEIHYDRIGGRDAA-HLVNMDDPNVLEIWNLVFIQFNRESETVLKPLPKKSIDTG 266
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+ Y + +D +YR+L+D+
Sbjct: 267 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARAYTGKVGAEDTDGIDMAYRVLADH 326
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+AL+D PD T + LR ++R A+ S + ++G L + E LGD
Sbjct: 327 ARTITIALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQRG-FFASLVDVVVESLGDA 385
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 386 FPELRKDPDMVKDIINEEEAQF--------------LKT--------------LSRGRRI 417
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L +++ T I GD A+ LYDTYG ++ +A + + + AFE++ + +S
Sbjct: 418 LDRKIQSLGDSTTIPGDTAWLLYDTYGFPLDLTALIAEERGMGVDLLAFEEEKKAAQLKS 477
Query: 484 KAKAAS-------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K + ++ ID + K TDD KY Y D N Y F VG V+
Sbjct: 478 QGKGSGDEDHIMLDIYAIDELRNKGVAATDDSPKYKYTSDDNGN-YEF----EQAVGTVL 532
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
A+R R +D + G++ DKT+ YA GGQ D G N
Sbjct: 533 ----------ALRRER--MFVDEVITGQE--CGVLLDKTSFYAEQGGQSFDEGYMLREND 578
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+ E+ V+ ++ G ++H G V + KV LT + VD R M HT +H+LN
Sbjct: 579 SAEDFTVKNTQVRG--GYVLHIGTVYGTLKVGDRLT--LHVDEARRRPIMSNHTATHILN 634
Query: 657 AALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
LR VL Q+ V D DF+ G +S D V E+ +IA+ V
Sbjct: 635 YGLRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTDEVRRTEEIAAAMIADAKGVYALDA 693
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFNT 764
+ + L + E YPD V ++ I S ++ S E C GTH+ N+
Sbjct: 694 PLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVEELLADPNSPAGSLTSIEFCGGTHLQNS 753
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAA-SFSQILNVGNIPYGD 822
H ++ ++ G+R I +TG ++ A L + + ++ + +IP D
Sbjct: 754 SHAAPFVIVSEEAIAKGIRRIVAVTGAEAQKAQRKADALKLSLDALAEKVKAQSIPNKD 812
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 57 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMARLRRAANTQKCIRAGGKHNDLDDVGKD 116
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 117 VYHHTFFEMLGSWSFGDYFKHLACKMALELLTQ-EFGIPIERLYVTY 162
>gi|126632676|emb|CAM56636.1| novel protein similar to vertebrate aminolevulinate delta-synthase
1 (ALAS1) [Danio rerio]
Length = 917
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 287/812 (35%), Positives = 414/812 (50%), Gaps = 83/812 (10%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R F+D+F GH +V SS + P GD S+ FVN+GM QFK + LG Y R
Sbjct: 2 VRRKFIDFFREGYGHRVVPSSSVRPRGDPSLLFVNAGMNQFKPILLGCADPRSEMVSYRR 61
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V NSQKCVR GGKHNDL G+D YHHTFFEMLGNWSF DY+K +AC MA LT+
Sbjct: 62 VVNSQKCVRAGGKHNDLQDVGKDVYHHTFFEMLGNWSFGDYFKVEACAMAWRLLTEE-YG 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P RLY +YF G GLP DEETRDIWL +G+ DH+ GMK NFWEMG TGPCG
Sbjct: 121 IPAQRLYVSYFSGDPANGLPADEETRDIWLSMGLRADHVLPFGMKDNFWEMGETGPCGPC 180
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
+EIHYD G ++A + VNAD D++EIWN+VF+ + R S ++ L + +DTG+G ER
Sbjct: 181 TEIHYDHIGNRNAA-SLVNADSPDVVEIWNLVFMQYNRESNGSLRALPQCSVDTGMGLER 239
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LVT+LQ K S YDTDLF PLL I + S A Y ++ LD +YR+++D+ R I
Sbjct: 240 LVTVLQGKRSNYDTDLFTPLLSAIHQCSKAPAYQGRTGAADVAQLDMAYRVVADHIRTIC 299
Query: 312 VALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
V +AD ++P A LR ++R A+ S +V + +G L L +A +LGD YPE+
Sbjct: 300 VCIADGVYPGMAGAELVLRRILRRAVRFSTEVLQAPEGALAS-LVPTVANLLGDAYPELN 358
Query: 369 DSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
++I LI E+ +L++ G + + +
Sbjct: 359 TESDRIMDLINQNEAHFLSSLKQ-----------------------------GRRVIDRT 389
Query: 428 LAR-DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
L+ D + + +A++LY G ++I +L +K + + + L + E+S+
Sbjct: 390 LSNMDENSSFFPASVAWSLYRNLGFPLDLI-DLMLEEKGKIVDKKEMKVLEDEYEKSEED 448
Query: 487 AASNVPDIDLMDL-----KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
+ +DL L + P TDD KY Y ++ + PC + L ++
Sbjct: 449 EGEKLDQLDLHSLAELQRQRVPHTDDSPKYCYSVGSDGQYVFEPCKASVLA-------LY 501
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
C D + R G +H A +I D+T+ YA GGQ +D G Y T ++
Sbjct: 502 C-DGALVSEVRQG--------QHCA---VILDQTSFYAEQGGQANDQG--YFTKDGLQDV 547
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+ + G +VH V ++ + G + VD RLGCM HT +H+LN ALR
Sbjct: 548 LFPVKCVRLAGGYVVH--KVTAAETLRTGDQVHLHVDEAWRLGCMINHTATHVLNFALRE 605
Query: 662 VL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
+L Q+ ++ DFSV G +L+V + VE+ + ++I V + S
Sbjct: 606 LLGPVVSQRGSHCSANRLRFDFSVKG-SLTVSELQKVEELVLNIIRQNADVHVEEVPLSS 664
Query: 721 LPFLTHLTVIPGEIYPDDVIL---------IDISDKENVISREPCCGTHVFNTGHIESCT 771
+ L + E+YPD V + + S++ S E CCGTH+ TG I
Sbjct: 665 AKQIAGLRTVD-ELYPDPVRVVSVAVPVSDLLASERAEQTSVELCCGTHLLRTGAIRDFV 723
Query: 772 VIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
V+ + GV I TGD + A E G+ L
Sbjct: 724 VVSERQMMKGVCRIVAFTGDDAIKAREAGQAL 755
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 70/106 (66%), Gaps = 6/106 (5%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK + LG Y RV NSQKC+R GGKHNDL G+D
Sbjct: 26 PRGDPSLLFVNAGMNQFKPILLGCADPRSEMVSYRRVVNSQKCVRAGGKHNDLQDVGKDV 85
Query: 874 YHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K +AC MA LT+ +P RLY ++
Sbjct: 86 YHHTFFEMLGNWSFGDYFKVEACAMAWRLLTE-EYGIPAQRLYVSY 130
>gi|432114146|gb|ELK36179.1| Alanyl-tRNA synthetase, cytoplasmic [Myotis davidii]
Length = 991
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 286/825 (34%), Positives = 417/825 (50%), Gaps = 82/825 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + +T V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 18 LTASEIRQRFIDFFKRNE-NTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 76
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 77 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 136
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LGV I MK NFWEMG TG
Sbjct: 137 QE-FGIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGVDDTKILPGNMKDNFWEMGDTG 195
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + T+ PL K IDTG
Sbjct: 196 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRETDGTLKPLPKKSIDTG 254
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 255 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGADDADGIDMAYRVLADH 314
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 315 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASKG-FFATLVDVVVQSLGDA 373
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 374 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 405
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 406 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 465
Query: 482 RSKAKAASNVPDIDLMDL-----KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K + +D+ + K TDD KY Y D+ Y F + V V+
Sbjct: 466 QGKGAGGEDHIMLDIYAIEELRGKSLEATDDSPKYSYLSDSTGS-YAF----ESTVATVM 520
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
DK + +G G++ DKT YA GGQI D G + + +
Sbjct: 521 ---ALRRDKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 566
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + + KV G R+ +D R M HT +H+L
Sbjct: 567 SSEDKTEFTVKNTQVRGGYVLHIGTIYGNLKV--GDQVRLFIDEPRRRPVMSNHTATHIL 624
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL Q+ V D DF+ G +S + E+ +N++I V +
Sbjct: 625 NFALRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTQQIKKAEQIVNEMIEAAKPVYTQD 683
Query: 716 MRASELPFLTHLTVIPGEIYPDDV-----------ILIDISDKE-NVISREPCCGTHVFN 763
+ + L + E YPD V +L D S ++ S E C GTH+ N
Sbjct: 684 CPLAAAKAIQGLRAVFDETYPDPVRVVSVGVPVSELLDDPSGPAGSLTSVEFCGGTHLQN 743
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 744 SSHAGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLS 788
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 45 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 104
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 105 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 150
>gi|340718527|ref|XP_003397717.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Bombus
terrestris]
Length = 1193
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 285/816 (34%), Positives = 417/816 (51%), Gaps = 86/816 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
+ +K IR +++D+F ++ H V SS +P+ D ++ F N+GM QFK +FLG
Sbjct: 5 MSAKQIRQAYIDFF-KSKNHEYVHSSSTIPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDM 63
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A R NSQKC+R GGKHNDL G+D YHHTFFEM+GNWSF DY+K++ C A EFLT
Sbjct: 64 AKLMRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICTWAWEFLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ L DRLY TYFGG ++ L DEE + IWL LGV H+ MK NFWEMG TG
Sbjct: 124 -VKLKLSADRLYVTYFGGDEKNNLKSDEECKQIWLSLGVSPSHVLPGNMKDNFWEMGETG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D D++EIWN+VFI R + ++ L K +ID G
Sbjct: 183 PCGPCSEIHYDRIGNREAA-DLVNQDDPDVLEIWNLVFIQFNRETDGSLKLLPKKHIDCG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LG ERLV+++QNK + YDTDLF+PL + I++ +GA PY + +D +YR+L+D+
Sbjct: 242 LGLERLVSVIQNKRANYDTDLFVPLFDAIQEGTGAPPYRGRVGMEDEDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K G L + ILGD+
Sbjct: 302 ARTITIALADGGVPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFGSLVNVVVNILGDI 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I ++ EE F +KT L G
Sbjct: 361 FPEVRKEPQYIIDVINEEEIQF--------------LKT--------------LSRGRNL 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L + +A+ S + GD+A+ LYDTYG ++ Q +A K L + +E+ K +L
Sbjct: 393 LNRTIAKLESSNVLPGDVAWRLYDTYGFPVDLTQLMAEEKGLKVDIIGYEEAKKQAQLIS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNS--KRYTF-PCLDTNLVG 533
+SK+ + ++D+ + K T+D KY+Y N + Y F PC G
Sbjct: 453 QSKSGGVDDQINLDVHAITELQNKGIKPTNDLPKYNYSVVNNKLYEEYEFVPC-----TG 507
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
VI A+R A++ ++ VG++ D+TN YA GGQI D G +L
Sbjct: 508 TVI----------AVRRAKTFVD----EVSSGEEVGILLDQTNFYAEQGGQIYDEG--FL 551
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
++ +V I + G ++H G V K+ G + +D R M HT +H
Sbjct: 552 VKIDDDDTEVRIKNVQVRGGYVLHIG-TVGQGKLKKGDKVFLNIDTTRRRLIMSNHTATH 610
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
LN ALR+VL T QK V D DF+ G ++ + V VE+ +++I ++
Sbjct: 611 ALNHALRKVLGTEVDQKGSLVAPDRLRFDFTNKG-AMTAEQVRKVEEITSNMIKGNKKIY 669
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTH 760
+ + + L + E YPD V ++ I + ++P C GTH
Sbjct: 670 AKESNLALAKTIQGLRAMFEETYPDPVRVVSIGVPVEDLEKDPLSSAALQTSVEFCGGTH 729
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
+ T HI + ++ G+R I LTG + A
Sbjct: 730 LHCTEHIGDFVIASEEAIAKGIRRIVALTGPEATKA 765
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 32 IPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDMAKLMRAVNSQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEM+GNWSF DY+K++ C A EFLT + L DRLY T+
Sbjct: 92 VYHHTFFEMMGNWSFGDYFKKEICTWAWEFLT-VKLKLSADRLYVTY 137
>gi|339254482|ref|XP_003372464.1| putative alanine--tRNA ligase [Trichinella spiralis]
gi|316967113|gb|EFV51596.1| putative alanine--tRNA ligase [Trichinella spiralis]
Length = 962
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 274/818 (33%), Positives = 423/818 (51%), Gaps = 88/818 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L + +IR +F++YF + H V SS ++P GD S+ F N+GM QFK +FLG
Sbjct: 5 LTANAIRQTFINYFTEKRNHQYVHSSSVIPKGDPSLLFTNAGMNQFKPIFLGTADPNSQM 64
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A + RV NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K+D C A E LT
Sbjct: 65 ASWKRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKDICAWAWEVLT 124
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K +P ++LY TYFGGS++ L D E R IWL++G+P + + GMK NFWEMG G
Sbjct: 125 KE-FKIPKEQLYVTYFGGSEKCRLQPDVECRQIWLDMGLPSERVLPFGMKDNFWEMGDIG 183
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G ++A +N D D++EIWN+VFI++ R ++ PL K +ID G
Sbjct: 184 PCGPCSEIHYDRIGNRNAA-NLINKDDPDVLEIWNLVFITYNRDKDGSLHPLPKRHIDCG 242
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LGFERLV+++Q K S YDTDLF+P+ I + + +PY + +D +YR+++D+
Sbjct: 243 LGFERLVSVIQGKKSNYDTDLFVPIFNRIAETAKVRPYMGKVGEEDEQQIDMAYRVVADH 302
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL--- 360
R +TVAL+D PD + LR ++R + + + G L + E L
Sbjct: 303 IRTLTVALSDGGRPDNCGRGYVLRRILRRGVRYATEKLNAPSG-FFANLVPVVVETLVED 361
Query: 361 GDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
G+ +PE+++ N + I+ EE +F +KT L G
Sbjct: 362 GETFPELKEDPNSVMEIINEEESLF--------------LKT--------------LSRG 393
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNE 478
+ L +++ + I G +A+ LY +YG ++ Q +A + E +E+ + +
Sbjct: 394 SRVLRQEIEKASKDKLIPGVVAWRLYASYGFPVDLTQLMAEESGYKVNMEEYEECRQQAQ 453
Query: 479 LKERSKAKAASNVPDIDLMDLKHF-----PVTDDKYKYDYHYDTNS-KRYTFPCLDTNLV 532
+ SK ++V D ++ + + P+TDDK KY Y N Y F
Sbjct: 454 MSSSSKFSQLNDVVDFNINAVNYLLNGKVPLTDDKPKYAYRLTENGDDDYEF-------- 505
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
D+V C + A+R ++G + + + LI DKT YA +GGQI D G
Sbjct: 506 -----DEVKC-EVLALR--KNGEFVSEVCSGDSCC--LICDKTAFYAESGGQIYDEG--- 552
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+ + + + + + G IVHFG V+ + +T G VD + R+ M+ HT +
Sbjct: 553 --SMEGDKSEFRVRNVQARGGYIVHFGEVMGT--ITRGSKLFQNVDQKRRVQVMKNHTAT 608
Query: 653 HLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
HLLN ALR VL QK V +D DF+ L+V+ + +E+ + +++ + V++
Sbjct: 609 HLLNFALREVLGQVEQKGSLVLTDRLRFDFTCKA-PLTVEQLMKIEQIVANIVNSDVEIY 667
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTH 760
+ + + L E YPD V ++ + + + ++P C GTH
Sbjct: 668 MQEVPLGVAKTIAGLRSTADETYPDPVRVVSVGTPVDALLKDPDGPGAKLASVEFCGGTH 727
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
+ TGH+ + ++ G+R I LT ++ AV+
Sbjct: 728 LLRTGHLGDFVIASEEAVARGIRRIVALTCHEAEQAVQ 765
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP GD S+ F N+GM QFK +FLG A + RV NSQKCIR GGKHNDL G+D
Sbjct: 33 IPKGDPSLLFTNAGMNQFKPIFLGTADPNSQMASWKRVVNSQKCIRAGGKHNDLDDVGKD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K+D C A E LTK +P ++LY T+
Sbjct: 93 VYHHTFFEMLGNWSFGDYFKKDICAWAWEVLTK-EFKIPKEQLYVTY 138
>gi|194386694|dbj|BAG61157.1| unnamed protein product [Homo sapiens]
Length = 992
Score = 441 bits (1134), Expect = e-120, Method: Compositional matrix adjust.
Identities = 290/840 (34%), Positives = 419/840 (49%), Gaps = 96/840 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELG------VPRDHIK--KEGMKCN 178
+ +P++RLY TYFGG + GL D E + IW LG V D K MK N
Sbjct: 124 QE-FGIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGTYLYSFVRLDDTKILPGNMKDN 182
Query: 179 FWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
FWEMG TGPCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL
Sbjct: 183 FWEMGDTGPCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGILKPL 241
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K IDTG+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D
Sbjct: 242 PKKSIDTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDM 301
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYN 355
+YR+L+D++R ITVALAD PD T + LR ++R A+ + + +G L
Sbjct: 302 AYRVLADHARTITVALADGGRPDNTGRGYVLRRILRRAVRCAHEKLNASRG-FFATLVDV 360
Query: 356 IAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
+ + LGD +PE++ + ++ I+ EE F +KT
Sbjct: 361 VVQSLGDAFPELKKDPDMVKDIINEEEVQF--------------LKT------------- 393
Query: 416 GLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ- 474
L G + L +++ I GD A+ LYDTYG ++ +A K L + + FE+
Sbjct: 394 -LSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEE 452
Query: 475 -KLNELKERSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLD 528
KL +LK + K ++ +D+ + + VTDD KY+YH D+ S Y F
Sbjct: 453 RKLAQLKSQGKGAGGEDLIMLDIYAIEELRARGLEVTDDSPKYNYHLDS-SGSYVF---- 507
Query: 529 TNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI 588
N V V+ +K + +G G++ DKT YA GGQI D
Sbjct: 508 ENTVATVM---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDE 553
Query: 589 G-VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMR 647
G + + +++++ + + G ++H G + KV G + +D R M
Sbjct: 554 GYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIYGDLKV--GDQVWLFIDEPRRRPIMS 611
Query: 648 AHTTSHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
HT +H+LN ALR VL QK V D DF+ G +S + E+ N++I
Sbjct: 612 NHTATHILNFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEA 670
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREP 755
V + + + L + E YPD V ++ I ++ S E
Sbjct: 671 AKAVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEF 730
Query: 756 CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNV 815
C GTH+ N+ H + ++ ++ G+R I +TG E K L A S + L+V
Sbjct: 731 CGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTG------AEAQKTLRKAESLKKCLSV 784
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIERLYVTY 137
>gi|350409807|ref|XP_003488850.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Bombus
impatiens]
Length = 1194
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 285/816 (34%), Positives = 417/816 (51%), Gaps = 86/816 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
+ +K IR +++D+F ++ H V SS +P+ D ++ F N+GM QFK +FLG
Sbjct: 5 MSAKQIRQAYIDFF-KSKNHEYVHSSSTIPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDM 63
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A R NSQKC+R GGKHNDL G+D YHHTFFEM+GNWSF DY+K++ C A EFLT
Sbjct: 64 AKLMRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICTWAWEFLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ L DRLY TYFGG ++ L DEE + IWL LGV H+ MK NFWEMG TG
Sbjct: 124 -VKLKLSADRLYVTYFGGDEKNNLKSDEECKQIWLSLGVSPSHVLPGNMKDNFWEMGETG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D D++EIWN+VFI R + ++ L K +ID G
Sbjct: 183 PCGPCSEIHYDRIGNREAA-DLVNQDDPDVLEIWNLVFIQFNRETDGSLKLLPKRHIDCG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LG ERLV+++QNK + YDTDLF+PL + I++ +GA PY + +D +YR+L+D+
Sbjct: 242 LGLERLVSVIQNKRANYDTDLFVPLFDAIQEGTGAPPYRGRVGMEDEDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K G L + ILGD+
Sbjct: 302 ARTITIALADGGVPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFGSLVNVVVNILGDI 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I ++ EE F +KT L G
Sbjct: 361 FPEVKKDPQYIIDVINEEEIQF--------------LKT--------------LSRGRNL 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L + +A+ S + GD+A+ LYDTYG ++ Q +A K L + +E+ K +L
Sbjct: 393 LNRTIAKLGSSNVLPGDVAWRLYDTYGFPVDLTQLMAEEKGLKVDIIGYEEAKKQAQLIS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNS--KRYTF-PCLDTNLVG 533
+SK+ + ++D+ + K T+D KY+Y N + Y F PC G
Sbjct: 453 QSKSGGVDDQINLDVHAITELQNKGIKPTNDLPKYNYKVVNNKLYEEYEFVPC-----TG 507
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
VI A+R A++ ++ VG++ D+TN YA GGQI D G +L
Sbjct: 508 TVI----------AVRRAKTFVD----EVSSGEEVGILLDQTNFYAEQGGQIYDEG--FL 551
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
++ +V I + G ++H G V K+ G + +D R M HT +H
Sbjct: 552 VKIDDDDTEVRIKNVQIRGGYVLHIG-TVGQGKLKKGDKVFLNIDTTRRRLIMSNHTATH 610
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
LN ALR+VL T QK V D DF+ G ++ + V VE+ +++I ++
Sbjct: 611 ALNHALRKVLGTEVDQKGSLVAPDRLRFDFTNKG-AMTAEQVRKVEEITSNMIKGNKKIY 669
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTH 760
+ + + L + E YPD V ++ I + ++P C GTH
Sbjct: 670 AKESNLALAKTIQGLRAMFEETYPDPVRVVSIGIPVEDLEKDPLSSAALQTSVEFCGGTH 729
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
+ T HI + ++ G+R I LTG + A
Sbjct: 730 LHYTEHIGDFVIASEEAIAKGIRRIVALTGPEATKA 765
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 32 IPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDMAKLMRAVNSQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEM+GNWSF DY+K++ C A EFLT + L DRLY T+
Sbjct: 92 VYHHTFFEMMGNWSFGDYFKKEICTWAWEFLT-VKLKLSADRLYVTY 137
>gi|410925952|ref|XP_003976443.1| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase,
cytoplasmic-like [Takifugu rubripes]
Length = 966
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 282/826 (34%), Positives = 415/826 (50%), Gaps = 84/826 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + H+ V SS VP D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAAQIRQKFIDFFLRHE-HSYVHSSATVPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K+ AC+MALE LT
Sbjct: 64 AKLRRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKQLACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ + +DRLY TYFGGS++ GL D E + +W+ LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGISIDRLYVTYFGGSEEAGLEADLECKQLWINLGMDEARILPGSMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
PCG SEIHYD + G +S L VN D +++EIWN+VFI R S + PL K IDT
Sbjct: 183 PCGPCSEIHYDRIGGRDASHL--VNMDDPNVLEIWNLVFIQFNRESESVLKPLPKKSIDT 240
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ERLV++LQNK S YDTDLFLP E I++ +GA+PY + +D +YR+L+D
Sbjct: 241 GMGLERLVSVLQNKMSNYDTDLFLPYFEAIQQGTGARPYTGKVGAEDVDGIDMAYRVLAD 300
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
++R +T+AL+D PD T + LR ++R A+ S + ++G L + + LGD
Sbjct: 301 HARTLTIALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQRG-FFASLVDVVVKSLGD 359
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE++ ++ ++ EE F +KT L G +
Sbjct: 360 AFPELRKDPEMVKDVINEEEVQF--------------LKT--------------LSRGRR 391
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L +++ + GD A+ LYDTYG ++ +A K L + AFE++ + +
Sbjct: 392 ILDRKIISLGESKTVPGDTAWLLYDTYGFPLDLTSLIAEEKGLNVDLAAFEEEKKAAQLK 451
Query: 483 SKAKAAS-------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
S+ K A ++ I+ + K TDD KY Y D + P T L +
Sbjct: 452 SQGKGAGDEDHIMLDIYAIEELRTKGVAATDDSLKYRYSSDERGQYEFQPASATVLA--L 509
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLT 594
D+ FC ++ G++ D+T+ YA GGQ D G +
Sbjct: 510 RRDRTFC-----------------TEVSSGQECGVLLDQTSFYAEQGGQTFDEGFMVRED 552
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
++T + + + G ++H G V + K+ +T V+ +AR RL M HT +H+
Sbjct: 553 DSTGDRMEFTVKNTQVRGGYVLHVGTVYGTLKLGDQVTLHVD-EARRRL-VMSNHTATHI 610
Query: 655 LNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
LN ALR VL Q+ V D DF+ G LS V E+ +I V
Sbjct: 611 LNFALRGVLGEADQRGSLVAPDRLRFDFTAKG-ALSTGEVRRTEEIACALIKEAKTVYAL 669
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVF 762
++ + L + E YPD V ++ I S ++ S E C GTH+
Sbjct: 670 DAPLAQAKAIQGLRAVFDETYPDPVRVVSIGIPVEELLKDPDSTAGSLTSIEFCGGTHLQ 729
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
N+ H ++ ++ G+R I +TG ++ A + L A S
Sbjct: 730 NSAHAAPFVIVSEEAIAKGIRRIVAVTGGEAQKAQRKAEVLHQALS 775
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 77/115 (66%), Gaps = 6/115 (5%)
Query: 810 SQILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHN 864
S + + +P D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHN
Sbjct: 24 SYVHSSATVPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLRRAANTQKCIRAGGKHN 83
Query: 865 DLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
DL G+D YHHTFFEMLG+WSF DY+K+ AC+MALE LT+ + +DRLY T+
Sbjct: 84 DLDDVGKDVYHHTFFEMLGSWSFGDYFKQLACKMALELLTQ-EFGISIDRLYVTY 137
>gi|118763839|gb|AAI28795.1| Aars protein [Danio rerio]
Length = 966
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 290/840 (34%), Positives = 417/840 (49%), Gaps = 83/840 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + H V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAAQIREKFIDFFRRHE-HQYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 ARLRRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKHLACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG GL D E + IWL+LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYFGGHADAGLEPDLECKQIWLDLGMEESRILPGSMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI R S + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNMDDPNVLEIWNLVFIQFNRESETVLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+ Y + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARAYTGKVGAEDTDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+AL+D PD T + LR ++R A+ S + ++G L + E LGD
Sbjct: 302 ARTITIALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQRG-FFASLVDVVVESLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELRKDPDMVKDIINEEEAQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L +++ T I GD A+ LYDTYG ++ +A + + + AFE++ + +S
Sbjct: 393 LDRKIQSLGDSTTIPGDTAWLLYDTYGFPLDLTALIAEERGMGVDLLAFEEEKKAAQLKS 452
Query: 484 KAKAAS-------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K + ++ ID + K TDD KY Y D N Y F VG V+
Sbjct: 453 QGKGSGDEDHIMLDIYAIDELRNKGVAATDDSPKYKYTSDDNGN-YEF----EQAVGTVL 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
A+R R +D + G++ DKT+ YA GGQ D G N
Sbjct: 508 ----------ALRRER--MFVDEVITGQE--CGVLLDKTSFYAEQGGQSFDEGYMLREND 553
Query: 597 TQENG-KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+ E+ + + G ++H G V + KV LT + VD R M HT +H+L
Sbjct: 554 SAEDRMEFTVKNTQVRGGYVLHIGTVYGTLKVGDRLT--LHVDEARRRPIMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N LR VL Q+ V D DF+ G +S D V E+ +IA+ V
Sbjct: 612 NYGLRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTDEVRRTEEIAAAMIADAKGVYALD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I S ++ S E C GTH+ N
Sbjct: 671 APLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVEELLADPNSPAGSLTSIEFCGGTHLQN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAA-SFSQILNVGNIPYGD 822
+ H ++ ++ G+R I +TG ++ A L + + ++ + +IP D
Sbjct: 731 SSHAAPFVIVSEEAIAKGIRRIVAVTGAEAQKAQRKADALKLSLDALAEKVKAQSIPNKD 790
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMARLRRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKHLACKMALELLTQ-EFGIPIERLYVTY 137
>gi|432862331|ref|XP_004069802.1| PREDICTED: alanine--tRNA ligase, cytoplasmic-like [Oryzias latipes]
Length = 966
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 281/827 (33%), Positives = 412/827 (49%), Gaps = 86/827 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + H V SS +P D ++ F N+GM Q+K +FL +P
Sbjct: 5 LSAAQIRQKFIDFFLRYE-HQYVHSSSTIPLDDPTLLFANAGMNQYKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K+ AC+MALE LT
Sbjct: 64 AKLRRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKQLACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ + +DRLY TYFGG+ GL D E + IW++LGV I MK NFWEMG TG
Sbjct: 124 EE-FGISIDRLYVTYFGGNPDAGLEPDLECKQIWMDLGVEEARILPGSMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
PCG SEIHYD + G +S L VN D +++EIWN+VFI R S + PL K IDT
Sbjct: 183 PCGPCSEIHYDRIGGRDASHL--VNMDDPNVLEIWNLVFIQFNRESETELKPLPKKSIDT 240
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D
Sbjct: 241 GMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYSGKVGAEDVDGIDMAYRVLAD 300
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
++R IT+AL+D PD T + LR ++R A+ S + ++G L + + LGD
Sbjct: 301 HARTITIALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQRG-FFASLVDVVVDSLGD 359
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE++ + ++ ++ EE F +KT L G +
Sbjct: 360 AFPELKKDPDMVKDVINEEEAQF--------------LKT--------------LSRGRR 391
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L +++ + GD A+ LYDTYG ++ +A K + + FE++ + +
Sbjct: 392 ILDRKIMSLGDCKTLPGDTAWLLYDTYGFPLDLTSLIAEEKGMEVDLAGFEEEKKAAQLK 451
Query: 483 SKAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
S+ K A +V I ++D+ KH P TDD KY Y D N Y F ++ +
Sbjct: 452 SQGKGAGDVDHI-MLDIYAIEELRNKHVPPTDDSPKYVYTSDENGN-YEFQQASATVLAL 509
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
D+ FC ++ G++ D+T+ YA GGQ D G
Sbjct: 510 RC-DRAFC-----------------EEVTTGQECGVVLDQTSFYAEQGGQTYDEGYMLRE 551
Query: 595 N-TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
N T + + + G ++H G V + +V G + +D R M HT +H
Sbjct: 552 NDNTDDRMEFTVKNTQVRGGYVLHIGTVYGTLRV--GDRVSLCIDEARRRPIMSNHTATH 609
Query: 654 LLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
+LN ALR VL Q+ V D DF+ G L D + E +I + V
Sbjct: 610 ILNFALRGVLGEADQRGSLVAPDRLRFDFTAKG-ALKTDEIHRTEDIACAMIRDAKPVYA 668
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
+ +E + L + E YPD V ++ I S ++ S E C GTH+
Sbjct: 669 KEASLAEAKAIQGLRAVFDETYPDPVRVVSIGVPVQELLDDPNSPAGSLTSIEFCGGTHL 728
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
N+ H ++ ++ G+R I +TG ++ A L + S
Sbjct: 729 QNSSHAAPFVIVSEEAIAKGIRRIVAVTGAEAQKAQRKADALRQSLS 775
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM Q+K +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQYKPIFLNTIDPSHPMAKLRRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K+ AC+MALE LT+ + +DRLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKQLACKMALELLTE-EFGISIDRLYVTY 137
>gi|164660846|ref|XP_001731546.1| hypothetical protein MGL_1729 [Malassezia globosa CBS 7966]
gi|159105446|gb|EDP44332.1| hypothetical protein MGL_1729 [Malassezia globosa CBS 7966]
Length = 963
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 283/834 (33%), Positives = 414/834 (49%), Gaps = 90/834 (10%)
Query: 1 MNNPNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNV 60
M+N + + + +RS+FLD+F + HT V SS VPY D ++ F N+GM Q+K++
Sbjct: 1 MSNSSATVVNEWPAAKVRSTFLDFFREKE-HTFVPSSSTVPYDDPTLLFANAGMNQYKSI 59
Query: 61 FLGLTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKR 115
FLG + R NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K
Sbjct: 60 FLGTVDPSSEFSKLRRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKE 119
Query: 116 DACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGM 175
+A A + LT+ LP DRLY TYF G + GL D ET +IW ++GVP + I K
Sbjct: 120 EAISFAWKLLTEV-YGLPSDRLYVTYFEGDPKQGLEPDVETLEIWRKVGVPDERILKGNA 178
Query: 176 KCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTI 235
K NFWEMG+TGPCG SEIH+D G ++A + VN D D+IE+WN VFI R ++
Sbjct: 179 KDNFWEMGATGPCGPCSEIHFDRVGGRNAA-SLVNMDDPDVIEVWNNVFIQFNREEDGSL 237
Query: 236 VPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTD 295
PL +IDTG+GFERLV+ILQ+K S YDTD+F+PL I++++GA+PY +
Sbjct: 238 RPLPARHIDTGMGFERLVSILQDKRSNYDTDVFMPLFSRIQELTGARPYSGKLGAEDVDG 297
Query: 296 LDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKEL 352
LDT+YR+++D+ R +T A++D PD + LR ++R F+V G +L
Sbjct: 298 LDTAYRVVADHIRTLTFAISDGCIPDKDGRGYVLRRILRRGTRFVRKYFQVPIGAFFSQL 357
Query: 353 SYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIM 412
+ E +G +PEI ++Q IL EE + F + L + + EQ+
Sbjct: 358 VPTLVEQMGSFFPEITRKTKELQAILNEEEQSF----------ARTLDRGEKLFEQY--- 404
Query: 413 EEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF 472
AR T++SG + LYDTYG ++ +A + LT F
Sbjct: 405 -------------ANAARTEGRTKLSGADVWRLYDTYGFPVDLTSIMAEEQGLTFDQAEF 451
Query: 473 EQKLNELKERSKAKAASN---VPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYT 523
E+ E KE SK + +D+ DL H P T+D +KYD
Sbjct: 452 EKAQAESKEASKGQGKQQEALAVKLDVHDLGHLDADASVPQTNDVFKYDT---------- 501
Query: 524 FPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGG 583
P + + V + + F D +++ A++G G++ D+TN+YA +GG
Sbjct: 502 -PSMQAH-VKAIFQEHKFVSDSNSL--AKAGEPF-----------GILLDQTNMYAESGG 546
Query: 584 QIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRL 643
Q D G + + E+ ++ + G ++H G + K++ G V D R
Sbjct: 547 QQADTGSLVIDGKAE----FEVSDVQASNGYVLHIG-FLKYGKLSVGDQVVVSYDESRRR 601
Query: 644 GCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN 702
HT +H+LN LR +L QK V + DFS + ++V + +E N
Sbjct: 602 PLQNNHTGTHILNFGLREILGDHVDQKGSLVAPSKLRFDFS-HKAPVNVSELQKIEDISN 660
Query: 703 DVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILI-----------DISD-KENV 750
I V V + M E + L + GE YP+ V ++ D+++ +
Sbjct: 661 SFIERDVSVYAKDMVLEEAYKIPGLRAVFGESYPNPVRVVALEFDIDQMAKDLTNPRWRQ 720
Query: 751 ISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
S E C GTHV TG I V G+R I +TGD + A S
Sbjct: 721 TSIEFCGGTHVKKTGEIGRLVVTEESGIAKGIRRIVAVTGDEAVAVTATADEAS 774
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+PY D ++ F N+GM Q+K++FLG + R NSQKCIR GGKHNDL G+D
Sbjct: 39 VPYDDPTLLFANAGMNQYKSIFLGTVDPSSEFSKLRRAVNSQKCIRAGGKHNDLDDVGKD 98
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K +A A + LT+ LP DRLY T+
Sbjct: 99 TYHHTFFEMLGNWSFGDYFKEEAISFAWKLLTE-VYGLPSDRLYVTY 144
>gi|213512300|ref|NP_001133550.1| Alanyl-tRNA synthetase, cytoplasmic [Salmo salar]
gi|209154450|gb|ACI33457.1| Alanyl-tRNA synthetase, cytoplasmic [Salmo salar]
Length = 967
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 292/846 (34%), Positives = 425/846 (50%), Gaps = 95/846 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + H V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAAQIREKFIDFFIRHE-HQYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC MALE LT
Sbjct: 64 ARLKRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKHLACTMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K +P++RLY TYFGG ++ GL D E + IWL+LG+ I MK NFWEMG TG
Sbjct: 124 KE-FGIPIERLYVTYFGGHEEAGLDPDLECKQIWLDLGMDEARIIPGSMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIH+D G +A VN D +++EIWN+VFI + R S + PL K IDTG
Sbjct: 183 PCGPCSEIHFDRIGGRDAA-HLVNMDDPNVLEIWNLVFIQYNRESETELKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P + I+K +GA+ Y + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFIPYFQAIQKGTGARDYTGKVGAEDVDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+AL+D PD T + LR ++R A+ S + ++G L + E LGD
Sbjct: 302 ARTITIALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQKG-FFATLVDVVVESLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G K
Sbjct: 361 FPELKKDPDMVKDIINEEEEQF--------------LKT--------------LSRGRKI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L +++ I GD A+ LYDTYG ++ +A + + + AFE++ + +S
Sbjct: 393 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPLDLTALIAEERGMMVDVAAFEEEKKAAQVKS 452
Query: 484 KAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ K + + I ++D+ K TDD KY Y D +S +Y F VG V
Sbjct: 453 QGKGSGDEDHI-MLDIYAIEDLRNKGIAATDDTLKYSYSAD-DSGKYVF----EQAVGTV 506
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLT 594
+ A+R R A ++ + G++ DKT+ YA GGQ D G +
Sbjct: 507 L----------ALRRER--AFVEEVTTGQEC--GVLLDKTSFYAEQGGQSFDEGYMLRED 552
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
++ + + + G ++H G V + KV G + VD R M HT +H+
Sbjct: 553 DSVDDRMEFTVKNTQVRGGYVLHVGTVYGTLKV--GDHVILHVDEARRRPIMSNHTATHI 610
Query: 655 LNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
LN ALR VL Q+ V D DF+ G LS + V E+ IA + D +
Sbjct: 611 LNFALREVLGEADQRGSLVAPDRLRFDFTAKG-ALSTEEVRRTEE-----IACTMIRDAK 664
Query: 715 HMRASELPF-----LTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCC 757
H+ A + P + L + E YPD V ++ I S ++ S E C
Sbjct: 665 HVYAMDTPLAAAKAIQGLRAVFDETYPDPVRVVSIGIPVADLLADPSSTAGSLTSIEFCG 724
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS-FSQILNVG 816
GTH+ N+GH ++ ++ G+R I +TG ++ A L + S + + V
Sbjct: 725 GTHLRNSGHAAPFVIVSEEAIAKGIRRIVAVTGAEAQKAHRKADALRQSLSALGEKVKVQ 784
Query: 817 NIPYGD 822
P D
Sbjct: 785 TAPNKD 790
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 73/109 (66%), Gaps = 6/109 (5%)
Query: 816 GNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAG 870
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G
Sbjct: 30 ATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMARLKRAANTQKCIRAGGKHNDLDDVG 89
Query: 871 RDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+D YHHTFFEMLG+WSF DY+K AC MALE LTK +P++RLY T+
Sbjct: 90 KDVYHHTFFEMLGSWSFGDYFKHLACTMALELLTK-EFGIPIERLYVTY 137
>gi|268561116|ref|XP_002646367.1| C. briggsae CBR-ARS-2 protein [Caenorhabditis briggsae]
Length = 967
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 279/825 (33%), Positives = 410/825 (49%), Gaps = 86/825 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L + +RS+F+++F + HT V SS ++P+ D ++ F N+GM QFK +FLG+
Sbjct: 4 LTASEVRSTFIEFFREKKNHTYVHSSSVIPHDDPTLLFANAGMNQFKPLFLGIADPNSDL 63
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A R N+QKC+R GGKHNDL G+D YHHT+FEMLGNWSF DY+K++ A E LT
Sbjct: 64 AKLKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGNWSFGDYFKKEIITWAWELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+P +RLY + FGG + G+P D E R+IW +GVP + I GMK NFWEMG G
Sbjct: 124 -TVYGIPAERLYVSVFGGDEANGVPADSEAREIWRSVGVPEERILNFGMKDNFWEMGDVG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G A VNAD ++EIWN+VFI R + L +ID G
Sbjct: 183 PCGPCSEIHYDRIGN-RDASHLVNADDPMVVEIWNLVFIQFNREEGGALKSLPAKHIDCG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LG ERL+ ++Q+KTS YDTD+F P+ E I K SG + Y ++ +D +YR+++D+
Sbjct: 242 LGLERLIAVMQDKTSNYDTDIFQPIFEEITKKSGVRAYTGHIGDEDKDGVDMAYRVVADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R +T+AL+D PD + + LR ++R + + + + G L + ILGD
Sbjct: 302 IRTLTIALSDGGRPDNSGRGYVLRRILRRGVRYATEKLNAQPG-FFAALVPVVISILGDT 360
Query: 364 YPEIQ-DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE++ D + + +I EE + L + V L Q + P G K
Sbjct: 361 FPELKRDPVTVMDIINDEEKQFLKTLSRGRV------------LFQRAVDSLPA---GTK 405
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
GD+A+ LYDTYG ++ Q +A K L++ AFE + E
Sbjct: 406 TF-------------PGDIAWRLYDTYGFPADLTQLMAEEKGLSVDETAFEDARKKAIET 452
Query: 483 SKAKAASNVPDIDL-------MDLKHFPVTDD--KYKYDYHYDTNSKRYTF-PCLDTNLV 532
S A A +DL + K P TDD KY Y + + + Y F PC V
Sbjct: 453 SSAGAGKFRDTLDLDVHALAELQQKGIPTTDDSPKYAYSFTGEGSEAVYKFEPC-----V 507
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
G ++ AIR R G +D QL ++ D+TN YA GGQI D+GV
Sbjct: 508 GKIL----------AIR--RDGKFVD--QLVAGEEGAVLLDRTNFYAEQGGQIYDVGV-- 551
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
L+ + E+ + + G IV G+ SF V + R + D + + M+ HT +
Sbjct: 552 LSKSGDESNEFNVSNCQVRGGYIVLVGSAEGSFSVGDNVNQRFDEDRKQLI--MKNHTGT 609
Query: 653 HLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
H+LN ALR+VL + QK V D DF+ ++ + V E+Y +I + QV
Sbjct: 610 HVLNYALRKVLADSDQKGSLVAPDRMRFDFTNKA-AMTPEQVKQAEEYAQQLINAKGQVY 668
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTH 760
++ + + L + E YPD V ++ + + + P C GTH
Sbjct: 669 AKNSPLEDAKKINGLRAMFDETYPDPVRVVAVGTPVEQLLQNPEAEAGQNTTVEFCGGTH 728
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST 805
+ N HI + ++ G+R I LTG + A+ + L
Sbjct: 729 LQNVSHIGRIVISSEEAIAKGIRRIVALTGPEADRAIARAERLEA 773
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 69/106 (65%), Gaps = 6/106 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG+ A R N+QKCIR GGKHNDL G+D
Sbjct: 32 IPHDDPTLLFANAGMNQFKPLFLGIADPNSDLAKLKRAVNTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
YHHT+FEMLGNWSF DY+K++ A E LT +P +RLY +
Sbjct: 92 VYHHTYFEMLGNWSFGDYFKKEIITWAWELLT-TVYGIPAERLYVS 136
>gi|301604154|ref|XP_002931707.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Xenopus
(Silurana) tropicalis]
Length = 968
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 283/815 (34%), Positives = 410/815 (50%), Gaps = 84/815 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
+ + IR F+D+F HT V SS VP D ++ F N+GM QFK +FL +P
Sbjct: 5 MTASEIRQKFIDFF-KENAHTYVHSSATVPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC++AL+ LT
Sbjct: 64 AKLNRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKLALDLLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K + ++RLY TYFGG++ GL D E + IWL LG+P I MK NFWEMG TG
Sbjct: 124 KE-FGIDIERLYVTYFGGNEAAGLEPDLECKQIWLNLGLPESRILPGSMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIH+D G +A VN D +++EIWN+VFI R + T+ PL K IDTG
Sbjct: 183 PCGPCSEIHFDRIGGRDAA-HLVNMDDPNVLEIWNLVFIQFNRETDGTLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E IEK +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIEKGTGARPYTGKVGAEDVDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ + + +G L + + LG+
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASKG-FFATLVDVVVQSLGNA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEETQF--------------LKT--------------LNRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L +++ I GD A+ LYDTYG ++ +A + LTL E+FE++ + +S
Sbjct: 393 LDRKINSLGEHKVIPGDTAWLLYDTYGFPVDLTSLIAEERGLTLDLESFEEERKAAQLKS 452
Query: 484 KAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ K + D+ ++D+ + TDD KY Y + + Y F L + I
Sbjct: 453 QGKGTGD-EDLLMLDIYAIEELRSQGLEPTDDLPKYKYTSNADGV-YEFESLIATVKAIR 510
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLT 594
DK + A +G GL+ DKT YA GGQ D G +
Sbjct: 511 -------RDKMFVEEASTGQE-----------CGLVLDKTCFYAEQGGQTYDEGYMVKEE 552
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
++++ + + G ++H G + KV G + VD R M HT +H+
Sbjct: 553 ESSEDKTEFTVRNTQVRGGYVLHMGTLYGHLKV--GDQVCLYVDEPKRRPIMSNHTATHI 610
Query: 655 LNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
LN ALR VL Q+ V D DF+ G +S + E+ ND+I V
Sbjct: 611 LNFALRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTQEIRKTEEIANDIIKENKVVYAL 669
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVF 762
+E + L + E YPD V ++ I S ++ S E C GTH+
Sbjct: 670 DCSLAEAKAIQGLRAVFDETYPDPVRVVSIGIPVEDLLADPSSPAGSITSVEFCGGTHLQ 729
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
N+GH ++ ++ G+R I +TG ++ A+
Sbjct: 730 NSGHAGPFIIVTEEAIAKGIRRIVAVTGAEAQKAL 764
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 VPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLNRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC++AL+ LTK + ++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKLALDLLTK-EFGIDIERLYVTY 137
>gi|112984224|ref|NP_001037452.1| alanine--tRNA ligase, cytoplasmic [Bombyx mori]
gi|135089|sp|P21894.1|SYAC_BOMMO RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|155955|gb|AAA27821.1| transfer RNA-Ala synthetase [Bombyx mori]
Length = 967
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 279/816 (34%), Positives = 411/816 (50%), Gaps = 85/816 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP---- 66
+ IR +F+D+F +GH V SS +P D ++ F N+GM QFK +FLG + P
Sbjct: 5 MTGNEIRKTFIDFFIK-KGHKYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGSVDPNSDM 63
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A Y RV N+QKC+R GGKHNDL G+D YHHTFFEM+GNWSF DY+K++ C A E LT
Sbjct: 64 AQYIRVVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICAWAWELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
L +RLY TYF G GL D E R+IWL LGVP HI MK NFWEMG TG
Sbjct: 124 DV-FKLSRERLYVTYFEGDPSSGLEPDLECRNIWLNLGVPEAHILPGSMKDNFWEMGETG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+HYD G+ +A VN D D++EIWN+VFI R + ++ L +ID G
Sbjct: 183 PCGPCSELHYDRIGDREAA-HLVNMDDPDVLEIWNLVFIQFNRETDGSLKLLPTKHIDCG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LG ERLV+++QNK + YDTD F+P+ + IE +G +PY + +D +YR+L+D+
Sbjct: 242 LGLERLVSVIQNKRANYDTDFFMPIFKAIENATGVRPYSGKVGVDDVDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R +T+AL+D PD T + LR ++R A+ + + K G L Y + E+LGDV
Sbjct: 302 ARTLTIALSDGGCPDNTGRGYVLRRILRRAVRYASEKLNAKPG-FFGSLVYTVVELLGDV 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PEI+ + I ++ EE F +KT L+ G
Sbjct: 361 FPEIKKDPDSIVHVINEEEVQF--------------LKT--------------LLRGRNL 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L + + + + + GD+A+ LYDTYG ++ Q + K L + E +E+ K ++L
Sbjct: 393 LYRTIEKLNNSKTLPGDVAWRLYDTYGFPIDLTQLMCEEKGLNVDMEGYEKSRKESQLVS 452
Query: 482 RSKAKAASNVPDIDLMDLKHF-----PVTDDKYKYDYHYDTNSKR--YTFPCLDTNLVGI 534
+ KA ++ +D+ + H P TDD KY+Y + K YTF +V
Sbjct: 453 QGKAAGQEDLIALDVHAISHLQDTGIPATDDSPKYNYLPSSTDKDALYTFAPCTAKIV-- 510
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
A+R + S ++ G+I D+T+ YA GGQI D G Y+
Sbjct: 511 ------------ALRKNKEFVS----EISSGQECGVILDRTSFYAEQGGQIFDEG--YMV 552
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E + + + G ++H G V KV G T + +D R M HT +H+
Sbjct: 553 KIDDETVEFTVKNVQVKGGYVLHAGKVEGILKV--GDTLSLHIDTERRRLVMNNHTGTHV 610
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN LR+VL + Q+ V D DF+ G +++ + E I ++IA V
Sbjct: 611 LNNVLRKVLGNDSDQRGSLVMPDRLRFDFTNKG-PMTIKQIKDTENEIKEIIAKNKTVYA 669
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHV 761
+ SE + L + E YPD V ++ + + + P C G+H+
Sbjct: 670 NYTSLSEAKKINGLRAMFDEHYPDPVRVVSVGVPVEDLIKNPDAPTGFETSVEFCGGSHL 729
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
T HI ++ + G+R I +TG + A+
Sbjct: 730 HRTSHIGEYVIVSEEGIAKGIRRIVAVTGPEAIKAI 765
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG + P A Y RV N+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLGSVDPNSDMAQYIRVVNTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEM+GNWSF DY+K++ C A E LT L +RLY T+
Sbjct: 92 VYHHTFFEMMGNWSFGDYFKKEICAWAWELLTD-VFKLSRERLYVTY 137
>gi|195577578|ref|XP_002078646.1| GD22412 [Drosophila simulans]
gi|194190655|gb|EDX04231.1| GD22412 [Drosophila simulans]
Length = 948
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 274/805 (34%), Positives = 411/805 (51%), Gaps = 79/805 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +K +R+++LD+F Q H V SS +P D ++ F N+GM QFK +FLG
Sbjct: 4 LTAKEVRNAYLDFF-KEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEM 62
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
+ + RVAN+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A EFLT
Sbjct: 63 SKWVRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLT 122
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ ++LP DRLY TYFGG GL D E + +WL+LG+ +HI MK NFWEMG TG
Sbjct: 123 QR-LALPKDRLYVTYFGGDAASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETG 181
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+H+D G S VN D D++EIWN+VFI + R S ++ L K +ID G
Sbjct: 182 PCGPCSELHFDRIG-GRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCG 240
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++QNK S YDTDLF+PL + I+ +GA PY + +D +YR+L+D+
Sbjct: 241 MGFERLVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPPYQGRVGADDVDGIDMAYRVLADH 300
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K G L + ++LGD
Sbjct: 301 ARTITIALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFATLVNTVVDLLGDA 359
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I I+ EE F +KT L G
Sbjct: 360 FPEVKKDPQHIIDIINEEELQF--------------LKT--------------LTRGRNL 391
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + + + + T I GD+A+ LYDTYG ++ Q +A K L + + +E + S
Sbjct: 392 LNRTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLKIDMDGYEAAKHNSYVLS 451
Query: 484 KAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHY--DTNSKRYTFPCLDTNLVGI 534
+ K AS + +I+L + + P T+D +KY Y D Y + ++ +V +
Sbjct: 452 QGKGASKIEEINLDVHAISQLQEQGVPPTNDTFKYKYEAVSDERDSAYNYGVCNSKIVAL 511
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+Q + SG G++ DKTN YA +GGQI D G L
Sbjct: 512 RFENQF-------VNEITSGQK-----------AGIVLDKTNFYAESGGQIYDQGA--LV 551
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E + + + + G I+H G V + KV G + +D R M+ H+ +H
Sbjct: 552 KVNDEANEFLVDRVYNRGGYILHIGVVEGTLKV--GDELELHIDVERRWLTMKNHSATHA 609
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN L +VL T QK V ++ DF+ ++++ V+ E+ +++ V +
Sbjct: 610 LNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKA-AMTIEQVSKTEQLTKEMVYKNVPIYA 668
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
+ + + + L + E+YPD V N + +GHI +
Sbjct: 669 KESKLALAKKIRGLRSVFDEVYPDPV------RPANKPPSSFAAAPTLRRSGHIMDFVIS 722
Query: 774 GYKSYNHGVRSIKCLTGDSSKAAVE 798
++ G+R I LTG + A++
Sbjct: 723 SEEAIAKGIRRIVALTGPEALKALK 747
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 76/107 (71%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG + + RVAN+QKCIR GGKHNDL G+D
Sbjct: 31 IPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKWVRVANTQKCIRAGGKHNDLDDVGKD 90
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A EFLT+ ++LP DRLY T+
Sbjct: 91 VYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTQ-RLALPKDRLYVTY 136
>gi|440907203|gb|ELR57374.1| Alanyl-tRNA synthetase, cytoplasmic [Bos grunniens mutus]
Length = 1002
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 284/839 (33%), Positives = 417/839 (49%), Gaps = 101/839 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAGEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRD------------------ 168
+ +P++RLY TYFGG + GL D E + IW LG ++
Sbjct: 124 QE-FGIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGSVQNPVTGCNWAFLPALCRLDD 182
Query: 169 -HIKKEGMKCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISH 227
I MK NFWEMG TGPCG SEIHYD G +A VN D +++EIWN+VFI +
Sbjct: 183 SRILPGNMKDNFWEMGDTGPCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQY 241
Query: 228 KRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRT 287
R + + PL K IDTG+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY
Sbjct: 242 NRETDGILKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGR 301
Query: 288 FTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVK 344
+ +D +YR+L+D++R ITVALAD PD T + LR ++R A+ S +
Sbjct: 302 VGAEDADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNAS 361
Query: 345 QGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQP 404
+G L + + LGD +PE++ + ++ I+ EE F +KT
Sbjct: 362 RG-FFATLVDVVVQSLGDAFPELKKDPDMVKDIINEEEVQF--------------LKT-- 404
Query: 405 ELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKK 464
L G + L +++ I GD A+ LYDTYG ++ +A K
Sbjct: 405 ------------LSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTALIAEEKG 452
Query: 465 LTLCHEAF--EQKLNELKERSKAKAASNVPDIDLMDL-----KHFPVTDDKYKYDYHYDT 517
L + + F E+KL +LK + K ++ +D+ + K TDD KY YH D+
Sbjct: 453 LVVDMDGFDEERKLAQLKSQGKGAGGEDLIMLDIYAIEELREKGLEATDDSPKYSYHSDS 512
Query: 518 NSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNL 577
S Y F + V V+ D+ + A +G G++ DKT
Sbjct: 513 -SGTYMF----ESAVATVM---ALRRDRMFVEEASTGQE-----------CGVVLDKTCF 553
Query: 578 YATAGGQIDDIG-VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVE 636
YA GGQ D G + + +++++ + + G ++H G + S KV G R+
Sbjct: 554 YAEQGGQTYDEGYLVKVDDSSEDKTEFTVKNTQVRGGYVLHIGTLYGSLKV--GDQVRLF 611
Query: 637 VDARMRLGCMRAHTTSHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAA 696
+D R M HT +H+LN ALR VL Q+ V D DF+ G +S +
Sbjct: 612 IDEPRRRPVMSNHTATHILNFALRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTQQIKK 670
Query: 697 VEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------ 744
E+ N++I V + + L + E YPD V ++ I
Sbjct: 671 AEEIANEMIEAAKPVYTEDCSLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPS 730
Query: 745 SDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
++ S E C GTH+ N+ H+ + ++ ++ G+R I +TG ++ A+ ++L
Sbjct: 731 GPAGSLTSVEFCGGTHLQNSSHVGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAENL 789
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 137
>gi|355710377|gb|EHH31841.1| hypothetical protein EGK_12990 [Macaca mulatta]
Length = 992
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 285/833 (34%), Positives = 416/833 (49%), Gaps = 90/833 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT + SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYIHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELG------VPRDHIK--KEGMKCN 178
+ +P+ RLY TYFGG + GL D E + IW LG V D K MK N
Sbjct: 124 QE-FGIPIGRLYVTYFGGDEAAGLEPDLECKQIWQNLGAYLYSFVRLDDTKILPGNMKDN 182
Query: 179 FWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
FWEMG TGPCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL
Sbjct: 183 FWEMGDTGPCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGILKPL 241
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K IDTG+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D
Sbjct: 242 PKKSIDTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDM 301
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYN 355
+YR+L+D++R ITVALAD PD T + LR ++R A+ + + +G L
Sbjct: 302 AYRVLADHARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRG-FFATLVDV 360
Query: 356 IAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
+ + LGD +PE++ + ++ I+ EE F +KT
Sbjct: 361 VVQSLGDAFPELKKDPDMVKDIVNEEEVQF--------------LKT------------- 393
Query: 416 GLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ- 474
L G + L +++ I GD A+ LYDTYG ++ +A K L + + FE+
Sbjct: 394 -LSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEE 452
Query: 475 -KLNELKERSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLD 528
KL +LK + K ++ +D+ + + VTDD KY+YH D S Y F
Sbjct: 453 RKLAQLKSQGKGAGGEDLIMLDIYAIEELRARGLEVTDDSPKYNYHLDF-SGSYVF---- 507
Query: 529 TNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI 588
N V V+ +K + +G G++ DKT YA GGQI D
Sbjct: 508 ENTVATVM---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDE 553
Query: 589 G-VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMR 647
G + + +++++ + + G ++H G + KV G R+ +D R M
Sbjct: 554 GYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIYGDLKV--GDQVRLFIDEPRRRPIMS 611
Query: 648 AHTTSHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
HT +H+LN ALR VL QK V D DF+ G +S + E+ N++I
Sbjct: 612 NHTATHILNFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEA 670
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREP 755
V + + + L + E YPD V ++ I ++ S E
Sbjct: 671 AKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEF 730
Query: 756 CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
C GTH+ N+ H + ++ ++ G+R I +TG ++ + + L + S
Sbjct: 731 CGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKVLRKAESLKKSLS 783
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 75/113 (66%), Gaps = 6/113 (5%)
Query: 812 ILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDL 866
I + IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL
Sbjct: 26 IHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDL 85
Query: 867 SFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
G+D YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P+ RLY T+
Sbjct: 86 DDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIGRLYVTY 137
>gi|449461691|ref|XP_004148575.1| PREDICTED: alanine--tRNA ligase-like [Cucumis sativus]
Length = 956
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 277/827 (33%), Positives = 418/827 (50%), Gaps = 98/827 (11%)
Query: 7 SSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGL-- 64
S V + IR +F +F + H SSP+VP D ++ F N+GM QFK +FLG
Sbjct: 6 SQGVEWPADRIRDTFFRFF-EEKNHVYWNSSPVVPVNDPTLLFANAGMNQFKPIFLGTVD 64
Query: 65 ---TPAPYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMA 121
+ + R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A A
Sbjct: 65 PNTSLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWA 124
Query: 122 LEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWE 181
E LT+ LP DR+Y TYFGG ++ GL D E RD+WL +P + + G K NFWE
Sbjct: 125 WELLTQV-YKLPKDRIYATYFGGDEKAGLAPDTEARDMWLNF-LPAERVLPFGCKDNFWE 182
Query: 182 MGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
MG TGPCG +EIHYD G +A VN D IEIWN+VFI R + ++ PL
Sbjct: 183 MGDTGPCGPCTEIHYDRLGGRDAA-QLVNNDDPTCIEIWNLVFIQFNRENDGSLKPLPAK 241
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
++DTGLGFERL ++LQNK S YDTD+F+P+ + I+K +GA+PY + ++D +YR
Sbjct: 242 HVDTGLGFERLTSVLQNKMSNYDTDVFMPIFDAIQKATGARPYSGKVGPDDVDNMDMAYR 301
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAE 358
+++D+ R ++ A+AD P + LR ++R A+ +V K ++G L + +
Sbjct: 302 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQEG-FFNGLVSIVVK 360
Query: 359 ILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
++GDV+PE++ +I+ I+ EE F K L+K +E+F
Sbjct: 361 VMGDVFPELKQHEVRIREIIAEEEASFG----------KTLLKG---IEKF--------- 398
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
K+ A+D +SG AF L+DTYG ++ Q +A + L + + F ++E
Sbjct: 399 -------KKAAQDVQGKILSGQDAFILWDTYGFPLDLTQLMAEERGLLVDTQGFNNAMDE 451
Query: 479 LKERSKAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
+ERS++ MD K TDDK+K+ + D S
Sbjct: 452 ARERSRSAQNKQAGGTIAMDADATAALRKKAIASTDDKFKFIWFKDHESVVKAIYTGYEF 511
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
L + G++ VGL+ + T+ YA GGQI D G+
Sbjct: 512 LESVAAGNE----------------------------VGLVLESTSFYAEQGGQIFDTGI 543
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAH 649
G ++ + G IVH G+ S +++ G +VD R H
Sbjct: 544 -----VEGSFGSFQVCNVQIFGGFIVHIGSFNGGSSRISLGDKVICKVDYERRKLTAPNH 598
Query: 650 TTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +H+LN ALR +L QK V ++ DFS +G+ + D + +E +N I ++
Sbjct: 599 TCTHMLNFALREILGNHVDQKGSIVLPEKLRFDFS-HGKPVDPDDLRKIESIVNKQIEDE 657
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS----------DKEN--VISREPC 756
+ V+ + + +E + L + GE+YPD V ++ I D EN IS E C
Sbjct: 658 LDVNAQEVTLAEAKRINGLRAVFGEVYPDPVRVVAIGKNVDELLADPDNENWLSISSELC 717
Query: 757 CGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
GTH+ NT ++ ++ + G+R I +T DS+ A+E + L
Sbjct: 718 GGTHISNTREAKAFALLSEEGIAKGIRRITAVTTDSAFKAIEQAQSL 764
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGL-----TPAPYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK +FLG + + R N+QKCIR GGKHNDL G+D
Sbjct: 38 VPVNDPTLLFANAGMNQFKPIFLGTVDPNTSLSKLTRACNTQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A A E LT+ LP DR+Y T+
Sbjct: 98 TYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQ-VYKLPKDRIYATY 143
>gi|113195586|ref|NP_001037775.1| alanyl-tRNA synthetase, cytoplasmic isoform 1 [Danio rerio]
Length = 991
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 289/840 (34%), Positives = 417/840 (49%), Gaps = 83/840 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + H V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 30 LTAAQIREKFIDFFRRHE-HQYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 88
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 89 ARLRRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKHLACKMALELLT 148
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG GL D E + IWL+LG+ I MK NFWEMG TG
Sbjct: 149 QE-FGIPIERLYVTYFGGHADAGLEPDLECKQIWLDLGMEESRILPGSMKDNFWEMGDTG 207
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI R S + PL K IDTG
Sbjct: 208 PCGPCSEIHYDRIGGRDAA-HLVNMDDPNVLEIWNLVFIQFNRESETVLKPLPKKSIDTG 266
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+ Y + +D +YR+L+D+
Sbjct: 267 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARAYTGKVGAEDTDGIDMAYRVLADH 326
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+AL+D PD T + LR ++R A+ S + ++G L + + LGD
Sbjct: 327 ARTITIALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQRG-FFASLVDVVVKSLGDA 385
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 386 FPELRKDPDMVKDIINEEEAQF--------------LKT--------------LSRGRRI 417
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L +++ T I GD A+ LYDTYG ++ +A + + + AFE++ + +S
Sbjct: 418 LDRKIQSLGESTTIPGDTAWLLYDTYGFPLDLTALIAEERGMGVDLLAFEEEKKAAQLKS 477
Query: 484 KAKAAS-------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K + ++ ID + K TDD KY Y D N Y F VG V+
Sbjct: 478 QGKGSGDEDHIMLDIYAIDELRNKGVAATDDSPKYKYTSDDNGN-YEF----EQAVGTVL 532
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
A+R R +D + G++ DKT+ YA GGQ D G N
Sbjct: 533 ----------ALRRER--MFVDEVITGQE--CGVLLDKTSFYAEQGGQSFDEGYMLREND 578
Query: 597 TQENG-KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+ E+ + + G ++H G V + KV LT + VD R M HT +H+L
Sbjct: 579 SAEDRMEFTVKNTQVRGGYVLHIGTVYGTLKVGDRLT--LHVDEARRRPIMSNHTATHIL 636
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N LR VL Q+ V D DF+ G +S D V E+ +IA+ V
Sbjct: 637 NYGLRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTDEVRRTEEIAAAMIADAKGVYALD 695
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I S ++ S E C GTH+ N
Sbjct: 696 APLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVEELLADPNSPAGSLTSIEFCGGTHLQN 755
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAA-SFSQILNVGNIPYGD 822
+ H ++ ++ G+R I +TG ++ A L + + ++ + +IP D
Sbjct: 756 SSHAAPFVIVSEEAIAKGIRRIVAVTGAEAQKAQRKADALKLSLDALAEKVKAQSIPNKD 815
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 57 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMARLRRAANTQKCIRAGGKHNDLDDVGKD 116
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 117 VYHHTFFEMLGSWSFGDYFKHLACKMALELLTQ-EFGIPIERLYVTY 162
>gi|449508396|ref|XP_004163302.1| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase-like [Cucumis
sativus]
Length = 956
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 277/827 (33%), Positives = 417/827 (50%), Gaps = 98/827 (11%)
Query: 7 SSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGL-- 64
S V + IR +F +F + H SSP+VP D ++ F N+GM QFK +FLG
Sbjct: 6 SQGVEWPADRIRDTFFRFF-EEKNHVYWNSSPVVPVNDPTLLFANAGMNQFKPIFLGTVD 64
Query: 65 ---TPAPYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMA 121
+ + R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A A
Sbjct: 65 PNTSLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWA 124
Query: 122 LEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWE 181
E LT+ LP DR+Y TYFGG ++ GL D E RD+WL +P + + G K NFWE
Sbjct: 125 WELLTQV-YKLPKDRIYATYFGGDEKAGLAPDTEARDMWLNF-LPAERVLPFGCKDNFWE 182
Query: 182 MGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
MG TGPCG +EIHYD G +A VN D IEIWN+VFI R + ++ PL
Sbjct: 183 MGDTGPCGPCTEIHYDRLGGRDAA-QLVNNDDPTCIEIWNLVFIQFNRENDGSLKPLPAK 241
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
++DTGLGFERL ++LQNK S YDTD+F+P+ + I+K +GA+PY + +D +YR
Sbjct: 242 HVDTGLGFERLTSVLQNKMSNYDTDVFMPIFDAIQKATGARPYSGKVGPDDVDSMDMAYR 301
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAE 358
+++D+ R ++ A+AD P + LR ++R A+ +V K ++G L + +
Sbjct: 302 VVADHIRTLSFAIADGSCPGNEGREYVLRXILRRAIRYGSEVLKAQEG-FFNGLVSIVVK 360
Query: 359 ILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
++GDV+PE++ +I+ I+ EE F K L+K +E+F
Sbjct: 361 VMGDVFPELKQHEVRIREIIAEEEASFG----------KTLLKG---IEKF--------- 398
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
K+ A+D +SG AF L+DTYG ++ Q +A + L + + F ++E
Sbjct: 399 -------KKAAQDVQGKILSGQDAFILWDTYGFPLDLTQLMAEERGLLVDTQGFNNAMDE 451
Query: 479 LKERSKAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
+ERS++ MD K TDDK+K+ + D S
Sbjct: 452 ARERSRSAQNKQAGGTIAMDADATAALRKKAIASTDDKFKFIWFKDHESVVKAIYTGYEF 511
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
L + G++ VGL+ + T+ YA GGQI D G+
Sbjct: 512 LESVAAGNE----------------------------VGLVLESTSFYAEQGGQIFDTGI 543
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAH 649
G ++ + G IVH G+ S +++ G +VD R H
Sbjct: 544 -----VEGSFGSFQVCNVQIFGGFIVHIGSFNGGSSRISLGDKVICKVDYERRKLTAPNH 598
Query: 650 TTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +H+LN ALR +L QK V ++ DFS +G+ + D + +E +N I ++
Sbjct: 599 TCTHMLNFALREILGNHVDQKGSIVLPEKLRFDFS-HGKPVDPDDLRKIESIVNKQIEDE 657
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS----------DKEN--VISREPC 756
+ V+ + + +E + L + GE+YPD V ++ I D EN IS E C
Sbjct: 658 LDVNAQEVTLAEAKRINGLRAVFGEVYPDPVRVVAIGKNVDELLADPDNENWLSISSELC 717
Query: 757 CGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
GTH+ NT ++ ++ + G+R I +T DS+ A+E + L
Sbjct: 718 GGTHISNTREAKAFALLSEEGIAKGIRRITAVTTDSAFKAIEQAQSL 764
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGL-----TPAPYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK +FLG + + R N+QKCIR GGKHNDL G+D
Sbjct: 38 VPVNDPTLLFANAGMNQFKPIFLGTVDPNTSLSKLTRACNTQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A A E LT+ LP DR+Y T+
Sbjct: 98 TYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQ-VYKLPKDRIYATY 143
>gi|448533187|ref|XP_003870578.1| Ala1 alanyl-tRNA synthetase [Candida orthopsilosis Co 90-125]
gi|380354933|emb|CCG24449.1| Ala1 alanyl-tRNA synthetase [Candida orthopsilosis]
Length = 968
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 284/831 (34%), Positives = 418/831 (50%), Gaps = 82/831 (9%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLT 65
I++ + + +RS+FLD+F + + HT V SS +VP+ D ++ F N+GM Q+K +FLG
Sbjct: 16 INNTEKWTAPKVRSTFLDFFKDKKQHTYVPSSSVVPHNDPTLLFANAGMNQYKPIFLGTV 75
Query: 66 P-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
A R ANSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A
Sbjct: 76 DPASDFAKLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIAW 135
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ E LT+ L DRLY TYFGG D+ GL D E + WL++GV DHI K NFW
Sbjct: 136 SWELLTEV-YGLEKDRLYVTYFGGDDKQGLEADLEAKQFWLDVGVAEDHILPGDAKDNFW 194
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D +++E+WN+VFI + R + ++ L
Sbjct: 195 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNMDDPNVLEVWNVVFIQYNREADGSLRSLPN 253
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV+ILQNK+S YDTD+FLP+ E I +++G +PY F T ++ +DT+Y
Sbjct: 254 KHIDTGMGFERLVSILQNKSSNYDTDVFLPIFEKIREITGVRPYTGKFGTDDKDGIDTAY 313
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+++D+ R +T A+ D P+ + LR V+R G +L +
Sbjct: 314 RVIADHVRTLTFAICDGGVPNNEGRGYVLRRVLRRGSRYVRKYMNYPIGSFFPQLVDIVI 373
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
E +++PEI+ ++ IL EE F K L + + EQ+ I+
Sbjct: 374 EQNKEIFPEIESGSQDLKEILNEEELSFA----------KTLDRGEKLFEQYAII----- 418
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
++ P T +SG + LYDTYG ++ + +A L + + FE
Sbjct: 419 ----------ASKTPEQT-LSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEKGFEVAKE 467
Query: 478 ELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTN-SKRYTFPCLDTNLVGIVI 536
E +E SK A+ N + +D+ + K TN S +Y + +++ I
Sbjct: 468 ESREASKGGASKNASSLIKLDVHALSELEGKV-----VKTNDSAKYGLDNIKASVLAIYD 522
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNA-WVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
G G +DSIQ ++ G++ DKT YA GGQ D G +
Sbjct: 523 G----------------GKFVDSIQQDNEGKQYGILLDKTPFYAEQGGQEYDTGKLVIDG 566
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T+ N + + G ++H G V+ K++ G D R HT +H+L
Sbjct: 567 KTEFN----VENVQVYAGYVLHTGFVLEG-KLSVGDEVIAAYDELRRWPIRNNHTGTHVL 621
Query: 656 NAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
N ALR VL QK V ++ DFS + + L+ + VE N I + QV +
Sbjct: 622 NYALREVLGDDVDQKGSLVAKEKLRFDFS-HKQALTPKELEKVEDKSNQYIRDNKQVYYK 680
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVF 762
+ +E + L + GE YPD V ++ I +++ +S E C GTHV
Sbjct: 681 DVPLAEAKAINGLRAVFGETYPDPVRVVSIGVPVDDLLKDPTNEEWRSLSIEFCGGTHVA 740
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKA----AVENGKHLSTAASF 809
T I+ +I G+R I +TG + A A E G L A +
Sbjct: 741 KTSEIKDLVIIEESGIAKGIRRIVAVTGHDAHAVQRIAEEFGDELDHANAL 791
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG A R ANSQKCIR GGKHNDL GRD
Sbjct: 50 VPHNDPTLLFANAGMNQYKPIFLGTVDPASDFAKLKRAANSQKCIRAGGKHNDLEDVGRD 109
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LT+ L DRLY T+
Sbjct: 110 SYHHTFFEMLGNWSFGDYFKKEAIAWSWELLTE-VYGLEKDRLYVTY 155
>gi|68475751|ref|XP_718082.1| hypothetical protein CaO19.5746 [Candida albicans SC5314]
gi|68475886|ref|XP_718016.1| hypothetical protein CaO19.13169 [Candida albicans SC5314]
gi|74586350|sp|Q5A8K2.1|SYA_CANAL RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS; Flags: Precursor
gi|46439761|gb|EAK99075.1| hypothetical protein CaO19.13169 [Candida albicans SC5314]
gi|46439836|gb|EAK99149.1| hypothetical protein CaO19.5746 [Candida albicans SC5314]
Length = 969
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 290/851 (34%), Positives = 427/851 (50%), Gaps = 106/851 (12%)
Query: 4 PNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG 63
PN S++ + +RS+FLDYF Q HT V SS +VP+ D ++ F N+GM Q+K +FLG
Sbjct: 18 PNGSNH--WTASKVRSTFLDYFKKQQ-HTYVPSSSVVPHNDPTLLFANAGMNQYKPIFLG 74
Query: 64 LTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDAC 118
A R ANSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A
Sbjct: 75 TVDPASDFASLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAI 134
Query: 119 RMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCN 178
+ E LTK L DRLY TYFGG ++ GL D E ++ WL++GVP DHI ++ N
Sbjct: 135 DYSWELLTKV-YGLQEDRLYVTYFGGDEKQGLEPDLEAKNFWLKVGVPEDHILPGSVEDN 193
Query: 179 FWEMGSTGPCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVP 237
FWEMG GPCG SEIHYD + G +SAL VN D +++E+WN+VFI + R + +
Sbjct: 194 FWEMGDQGPCGPCSEIHYDRIGGRNASAL--VNMDDPNVLEVWNVVFIQYNREADGNLRT 251
Query: 238 LSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLD 297
L +IDTG+GFERLV+ILQNK S YDTD+FLP+ + I +++G +PY F ++ +D
Sbjct: 252 LPNKHIDTGMGFERLVSILQNKYSNYDTDVFLPIFDKIREITGVRPYTGKFGNEDKDGID 311
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSY 354
T+YR+++D+ R +T A+ D P+ + LR ++R G ++L
Sbjct: 312 TAYRVIADHVRTLTFAICDGGVPNNEGRGYVLRRILRRGSRYVRKYMNYPIGGFFQQLVD 371
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
+ E +++PEI ++ IL EE F K L + + EQ+ I+
Sbjct: 372 VVIEQNKEIFPEISSGAQDLKEILNEEELSFA----------KTLDRGEKLFEQYAII-- 419
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
++ P T +SG + LYDTYG ++ + +A L + E FE+
Sbjct: 420 -------------ASKTPEQT-LSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEEGFER 465
Query: 475 KLNELKERSKA---KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFP 525
E +E SK K + +D+ L P T+D++K Y
Sbjct: 466 AKEESREASKGSGTKDGKTLVKLDVHALSELDQNDAIPKTNDEFK-----------YGLE 514
Query: 526 CLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQI 585
+ +VGI G + +DSI+ + + G++ DKT YA GGQ
Sbjct: 515 NVKAKVVGIYDGSKF----------------VDSIE-DPSIQYGILLDKTPFYAEQGGQE 557
Query: 586 DDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
D G + ++ N + + G ++H GN+V K+ G D R
Sbjct: 558 YDTGKLVIDGKSEFN----VANVQVYAGYVLHTGNIVDG-KLNVGDEIIATYDELRRWPI 612
Query: 646 MRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
HT +H+LN ALR VL QK V ++ DFS + + ++ + +E N
Sbjct: 613 RNNHTGTHILNFALREVLGDGVDQKGSLVAPEKLRFDFS-HKQAVTAKELEKIEAISNKY 671
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVIS 752
I N +V + + ++ + L + GE YPD V ++ I + K + IS
Sbjct: 672 IKNNDKVYYKDVSLTKAKEINGLRAVFGETYPDPVRVVSIGVSVDDLLADPTNTKWHEIS 731
Query: 753 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS-FSQ 811
E C GTHV TG I+ +I G+R I +TG + H+ A+ F Q
Sbjct: 732 IEFCGGTHVAKTGDIKDLVIIEESGIAKGIRRIVAVTG-------HDAHHVQKVANEFEQ 784
Query: 812 -ILNVGNIPYG 821
I N ++P+G
Sbjct: 785 EIDNASSLPFG 795
Score = 126 bits (317), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG A R ANSQKCIR GGKHNDL GRD
Sbjct: 51 VPHNDPTLLFANAGMNQYKPIFLGTVDPASDFASLKRAANSQKCIRAGGKHNDLEDVGRD 110
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK L DRLY T+
Sbjct: 111 SYHHTFFEMLGNWSFGDYFKKEAIDYSWELLTK-VYGLQEDRLYVTY 156
>gi|238883003|gb|EEQ46641.1| alanyl-tRNA synthetase [Candida albicans WO-1]
Length = 969
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 290/851 (34%), Positives = 427/851 (50%), Gaps = 106/851 (12%)
Query: 4 PNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG 63
PN S++ + +RS+FLDYF Q HT V SS +VP+ D ++ F N+GM Q+K +FLG
Sbjct: 18 PNGSNH--WTASKVRSTFLDYFKKQQ-HTYVPSSSVVPHNDPTLLFANAGMNQYKPIFLG 74
Query: 64 LTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDAC 118
A R ANSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A
Sbjct: 75 TVDPASDFASLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAI 134
Query: 119 RMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCN 178
+ E LTK L DRLY TYFGG ++ GL D E ++ WL++GVP DHI ++ N
Sbjct: 135 DYSWELLTKV-YGLQEDRLYVTYFGGDEKQGLEPDLEAKNFWLKVGVPEDHILPGSVEDN 193
Query: 179 FWEMGSTGPCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVP 237
FWEMG GPCG SEIHYD + G +SAL VN D +++E+WN+VFI + R + +
Sbjct: 194 FWEMGDQGPCGPCSEIHYDRIGGRNASAL--VNMDDPNVLEVWNVVFIQYNREADGNLRT 251
Query: 238 LSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLD 297
L +IDTG+GFERLV+ILQNK S YDTD+FLP+ + I +++G +PY F ++ +D
Sbjct: 252 LPNKHIDTGMGFERLVSILQNKYSNYDTDVFLPIFDKIREITGVRPYTGKFGNEDKDGID 311
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSY 354
T+YR+++D+ R +T A+ D P+ + LR ++R G ++L
Sbjct: 312 TAYRVIADHVRTLTFAICDGGVPNNEGRGYVLRRILRRGSRYVRKYMNYPIGGFFQQLVD 371
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
+ E +++PEI ++ IL EE F K L + + EQ+ I+
Sbjct: 372 VVIEQNKEIFPEISSGAQDLKEILNEEELSFA----------KTLDRGEKLFEQYAII-- 419
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
++ P T +SG + LYDTYG ++ + +A L + E FE+
Sbjct: 420 -------------ASKTPEQT-LSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEEGFER 465
Query: 475 KLNELKERSKA---KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFP 525
E +E SK K + +D+ L P T+D++K Y
Sbjct: 466 AKEESREASKGSGTKDGKTLVKLDVHALSELDQNDAIPKTNDEFK-----------YGLE 514
Query: 526 CLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQI 585
+ +VGI G + +DSI+ + + G++ DKT YA GGQ
Sbjct: 515 NVKAKVVGIYDGSKF----------------VDSIE-DPSIQYGILLDKTPFYAEQGGQE 557
Query: 586 DDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
D G + ++ N + + G ++H GN+V K+ G D R
Sbjct: 558 YDTGKLVIDGKSEFN----VANVQVYAGYVLHTGNIVDG-KLNVGDEIIATYDELRRWPI 612
Query: 646 MRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
HT +H+LN ALR VL QK V ++ DFS + + ++ + +E N
Sbjct: 613 RNNHTGTHILNFALREVLGDGVDQKGSLVAPEKLRFDFS-HKQAVTAKELEKIEAISNKY 671
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVIS 752
I N +V + + ++ + L + GE YPD V ++ I + K + IS
Sbjct: 672 IKNNDKVYYKDVSLTKAKEINGLRAVFGETYPDPVRVVSIGVSVDDLLADPTNTKWHEIS 731
Query: 753 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS-FSQ 811
E C GTHV TG I+ +I G+R I +TG + H+ A+ F Q
Sbjct: 732 IEFCGGTHVAKTGDIKDLVIIEESGIAKGIRRIVAVTG-------HDAHHVQKVANEFEQ 784
Query: 812 -ILNVGNIPYG 821
I N ++P+G
Sbjct: 785 EIDNASSLPFG 795
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG A R ANSQKCIR GGKHNDL GRD
Sbjct: 51 VPHNDPTLLFANAGMNQYKPIFLGTVDPASDFASLKRAANSQKCIRAGGKHNDLEDVGRD 110
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK L DRLY T+
Sbjct: 111 SYHHTFFEMLGNWSFGDYFKKEAIDYSWELLTK-VYGLQEDRLYVTY 156
>gi|294654445|ref|XP_456501.2| DEHA2A03652p [Debaryomyces hansenii CBS767]
gi|199428887|emb|CAG84453.2| DEHA2A03652p [Debaryomyces hansenii CBS767]
Length = 1021
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 284/806 (35%), Positives = 411/806 (50%), Gaps = 96/806 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPR 71
+RS+FLDYF Q HT V SS +VP+ D ++ F N+GM Q+K +FLG + PA R
Sbjct: 82 VRSTFLDYFKVKQNHTFVPSSSVVPHNDPTLLFANAGMNQYKPIFLGTVDPASDFSTLKR 141
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A + E LT+
Sbjct: 142 AVNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAISWSWELLTEV-YK 200
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYFGG ++ GL D E ++ WL +GV DHI ++ NFWEMG GPCG
Sbjct: 201 LEQDRLYVTYFGGDEKQGLQPDLEAKNFWLAVGVAEDHILPGNLEDNFWEMGDQGPCGPC 260
Query: 192 SEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIHYD + G +S+L VN D +++E+WNIVF+ + R ++ L +IDTGLGFE
Sbjct: 261 SEIHYDRIGGRNASSL--VNMDDPNVLEVWNIVFMQYNREPDSSLRSLPAKHIDTGLGFE 318
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV+ILQNK+S YDTD+F P+ I +++G +PY F + +R +DT+YR+++D+ R +
Sbjct: 319 RLVSILQNKSSNYDTDVFQPIFNKIREITGVRPYTGKFGSEDRDGIDTAYRVIADHVRTL 378
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
T A+ D P+ + LR ++R G ++L + E +++PEI
Sbjct: 379 TFAITDGGVPNNEGRGYVLRRILRRGSRYVRKYMNYPIGSFFQQLVPVVVEQNSEIFPEI 438
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ + IL EE F K L + + EQ+ I+
Sbjct: 439 LKNQQDLTEILNEEELSFA----------KTLDRGEKLFEQYAIIA-------------- 474
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA-- 485
++ P T +SG + LYDTYG ++ + +A L + E FE+ E +E SKA
Sbjct: 475 -SKTPEQT-LSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEEGFEKAKEESREASKATN 532
Query: 486 -KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
KA ++ +D+ L P TDD +KYD + N+V I G
Sbjct: 533 NKAGVSLIKLDVHALSELDGNDKVPKTDDSFKYD-----------IENIKANVVAIYNG- 580
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
+ +DSI E + G++ DKT YA +GGQ D G + +
Sbjct: 581 ---------------SSFVDSIS-EAGSQAGILLDKTPFYAESGGQEYDTGKLVIDGVAE 624
Query: 599 ENGKVEIGELASLEGKIVHFGNVVS-SFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+ + G ++H G+++ S K+ + + D R HT +H+LN
Sbjct: 625 ----FSVSNVQVYGGYVLHTGSLLEGSLKLEDEIIAT--YDELRRWPIRNNHTGTHVLNF 678
Query: 658 ALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL QK V ++ DFS + + L+ D + VE ND I QV + +
Sbjct: 679 ALREVLGDNVDQKGSLVAPEKLRFDFS-HKQGLTPDELLKVETISNDYIKENKQVYAKDI 737
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDIS--------DKENV----ISREPCCGTHVFNT 764
R ++ + L + GE YPD V ++ I D +N +S E C GTHV T
Sbjct: 738 RLNDAKEIDGLRAVFGETYPDPVRVVSIGTSVEDLLKDPKNSEWHKVSIELCGGTHVAKT 797
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTG 790
G I+ +I G+R I +TG
Sbjct: 798 GDIKDLVIIEESGIAKGIRRIVAVTG 823
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + PA R NSQKCIR GGKHNDL GRD
Sbjct: 105 VPHNDPTLLFANAGMNQYKPIFLGTVDPASDFSTLKRAVNSQKCIRAGGKHNDLEDVGRD 164
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LT+ L DRLY T+
Sbjct: 165 SYHHTFFEMLGNWSFGDYFKKEAISWSWELLTE-VYKLEQDRLYVTY 210
>gi|297284439|ref|XP_002808351.1| PREDICTED: LOW QUALITY PROTEIN: alanyl-tRNA synthetase,
cytoplasmic-like [Macaca mulatta]
Length = 967
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 286/827 (34%), Positives = 412/827 (49%), Gaps = 87/827 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT + SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYIHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P+ RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIGRLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL--G 361
+R ITVALAD PD T + LR R A FK G + + I L G
Sbjct: 302 ARTITVALADGGRPDNTGRGFLLREPPRPA----RRFFKRGXGIVFGFIQPLILLPLCQG 357
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
D +PE++ + ++ I+ EE F +KT L G
Sbjct: 358 DAFPELKRDPDMVKDIVNEEEVQF--------------LKT--------------LSRGR 389
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNEL 479
+ L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +L
Sbjct: 390 RILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQL 449
Query: 480 KERSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
K + K ++ +D+ + + VTDD KY+YH D S Y F N V
Sbjct: 450 KSQGKGAGGEDLIMLDIYAIEELRARGLEVTDDSPKYNYHLDF-SGSYVF----ENTVAT 504
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYL 593
V+ +K + +G G++ DKT YA GGQI D G + +
Sbjct: 505 VM---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKV 550
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
+++++ + + G ++H G + KV G R+ +D R M HT +H
Sbjct: 551 DDSSEDKTEFTVKNAQVRGGYVLHIGTIYGDLKV--GDQVRLFIDEPRRRPIMSNHTATH 608
Query: 654 LLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
+LN ALR VL QK V D DF+ G +S + E+ N++I V
Sbjct: 609 ILNFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKPVYT 667
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
+ + + L + E YPD V ++ I ++ S E C GTH+
Sbjct: 668 QDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHL 727
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
N+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 728 RNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLS 774
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 75/113 (66%), Gaps = 6/113 (5%)
Query: 812 ILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDL 866
I + IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL
Sbjct: 26 IHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDL 85
Query: 867 SFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
G+D YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P+ RLY T+
Sbjct: 86 DDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIGRLYVTY 137
>gi|341896461|gb|EGT52396.1| hypothetical protein CAEBREN_18885 [Caenorhabditis brenneri]
Length = 966
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 281/827 (33%), Positives = 405/827 (48%), Gaps = 88/827 (10%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP---- 66
+L + +RS+F+++F + HT V SS ++P+ D ++ F N+GM QFK +FLG+
Sbjct: 3 QLTASEVRSTFINFFREKKEHTYVHSSSVIPHDDPTLLFANAGMNQFKPLFLGIADPNSD 62
Query: 67 -APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
A R N+QKC+R GGKHNDL G+D YHHT+FEMLGNWSF DY+K++ A E L
Sbjct: 63 LAKLKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGNWSFGDYFKKEIITWAWELL 122
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
T +P +RLY + FGG + G+P D E RDIW +GVP + I GMK NFWEMG
Sbjct: 123 T-TVYGIPAERLYVSVFGGDEANGVPADTEARDIWRSVGVPDERILNFGMKDNFWEMGDV 181
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG SEIHYD G A VNAD ++EIWN+VFI R + PL +ID
Sbjct: 182 GPCGPCSEIHYDRIGN-RDASHLVNADDPMVVEIWNLVFIQFNREEGGALKPLPAKHIDC 240
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
GLG ERL+ ++Q+KTS YDTD+F P+ E I K SG + Y ++ +D +YR++ D
Sbjct: 241 GLGLERLIAVMQDKTSNYDTDIFQPIFEAIHKGSGVRKYTGLIGDEDKDGVDMAYRVVGD 300
Query: 306 YSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVK----QGKLVKELSYNIAEILG 361
+ R +T+AL+D PD + R V +L + + Q L + ILG
Sbjct: 301 HIRTLTIALSDGGRPDNSG--RGYVLRRILRRGIRYATEKLNAQPGFFASLVPVVISILG 358
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
+ +PE+ + I+ +E + F +KT L G
Sbjct: 359 ETFPELSRDPETVMDIINDEEKQF--------------LKT--------------LSRGR 390
Query: 422 KYLTKQLARDPSITE-ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
K + P+ T+ GD+A+ LYDTYG ++ Q +A K L++ AF++ +
Sbjct: 391 VLFQKAVDSLPAGTKTFPGDIAWRLYDTYGFPADLTQLMAEEKGLSVDISAFDEARKKAV 450
Query: 481 ERSKAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNSKR--YTF-PCLDTN 530
E S A A +DL + K P TDD KY Y + Y F PC+
Sbjct: 451 ETSSAGAGKFRDTLDLDVHALAELQQKGVPTTDDTPKYAYSFTGEGAEAVYKFEPCIGKI 510
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
L AIR R G +D QL L+ D+TN YA GGQI D+GV
Sbjct: 511 L---------------AIR--RDGKFVD--QLVAGEEGALLLDRTNFYAEQGGQIYDVGV 551
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
LT E+ + + G IV G+ SF V + R + D + + M+ HT
Sbjct: 552 --LTKVNDESNEFNVNNCQVRGGYIVLVGSAEGSFAVGDEVNQRFDEDRKQLI--MKNHT 607
Query: 651 TSHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ 710
+H+LN ALR+VL+ + QK V D DF+ ++ D V E+Y +I + Q
Sbjct: 608 GTHVLNYALRKVLSDSDQKGSLVAPDRMRFDFTNKA-AMTSDQVKQAEEYAQQLIDTKGQ 666
Query: 711 VDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCG 758
V ++ S+ + L + E YPD V ++ + + + P C G
Sbjct: 667 VYAKNSPLSDAKRINGLRAMFDETYPDPVRVVAVGTPVEQLLQNPEAEEGQNTTVEFCGG 726
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST 805
TH+ N HI + ++ G+R I LTG ++ A+ L
Sbjct: 727 THLQNVSHIGRIVISSEEAIAKGIRRIVALTGPEAERAIARADRLEA 773
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 69/106 (65%), Gaps = 6/106 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG+ A R N+QKCIR GGKHNDL G+D
Sbjct: 32 IPHDDPTLLFANAGMNQFKPLFLGIADPNSDLAKLKRAVNTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
YHHT+FEMLGNWSF DY+K++ A E LT +P +RLY +
Sbjct: 92 VYHHTYFEMLGNWSFGDYFKKEIITWAWELLT-TVYGIPAERLYVS 136
>gi|443730742|gb|ELU16117.1| hypothetical protein CAPTEDRAFT_155717 [Capitella teleta]
Length = 1188
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 274/820 (33%), Positives = 411/820 (50%), Gaps = 94/820 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +R F+D+F + H SS +P D ++ F N+GM QFK +F G
Sbjct: 5 LTGNQLRQMFVDFFVEKKQHKYWHSSSTIPLDDPTLLFANAGMNQFKPIFQGCVDPNSEM 64
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
RV NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ A E LT
Sbjct: 65 GRLVRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKETIEWAWELLT 124
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ LP DR+Y +YFGG + GL D E RDIWL LG+P + + GM NFW+MG TG
Sbjct: 125 EV-YKLPKDRMYVSYFGGVPEKGLEPDNEARDIWLNLGLPPERVMPFGMADNFWQMGDTG 183
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIH+D G A VN D D++EIWN+VF + + T+ L K ID G
Sbjct: 184 PCGPCSEIHFDRIGGGRDAAHLVNEDDPDVLEIWNLVFTQYNMENDGTLKGLPKKNIDCG 243
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERL +++Q K S YDTDLF P+ + I+K +G + Y + +D +YR+L+D+
Sbjct: 244 MGLERLTSVIQGKPSNYDTDLFKPIFDAIQKATGCRDYTGKVGADDSDGIDMAYRVLADH 303
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R +T+ALAD PD T + LR ++R A+ + + K G ++ L + +ILGD
Sbjct: 304 ARTLTIALADGGRPDNTGRGYVLRRILRRAVRYANEKLNAKPG-VIASLVDTVVDILGDA 362
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE + F +KT L G +
Sbjct: 363 FPEVRKDPDMVKDIINEEEQQF--------------LKT--------------LTRGRRL 394
Query: 424 LTKQLARDPSITE-ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELK 480
L + + + S + + GD+A+ LYDTYG ++ Q + K +T+ +E+ K ++K
Sbjct: 395 LERTINKLGSGCKMLPGDVAWRLYDTYGFPLDLTQLMVEEKNMTVDLAGYEECKKAAQIK 454
Query: 481 ERSKAKAASNVPDIDL-----MDLKHFPVTDDKYKY------DYHYDTNSKRYTFPCLDT 529
+ K+ ++D+ + + P TD+ KY D YD N T L +
Sbjct: 455 SQGKSGEVDEQINLDVHAISDLQKQGLPPTDESPKYIYSATVDGEYDFNMCNATVKALRS 514
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
N K + SG VG++ DKT YAT GGQ+ D G
Sbjct: 515 N--------------KTFVDQVTSGQE-----------VGVVLDKTCFYATQGGQMFDEG 549
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
++ E+ ++++ ++ G ++H G V + V G R++VD R M H
Sbjct: 550 --FIVKVDDEDTELKVHDVQVRGGYVLHVGVVEGTLSV--GDNVRLQVDVERRRPIMCNH 605
Query: 650 TTSHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
T +H+LN ALR+VL QK V D+ DF+ G ++ V E +N V A
Sbjct: 606 TGTHMLNFALRQVLGSADQKGSLVAPDKLRFDFTAKG-AMTAKQVKDTEDIVNQVAAKNE 664
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILID--------ISDKE----NVISREPCC 757
+V + + + L + E YPD V ++ +SD + ++ S E C
Sbjct: 665 EVFTKVSDLAPAKAIQGLRAVFDETYPDPVRVVSLGISVEDLLSDPDGPAGSLTSVEFCG 724
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
GTH+ TGHI +I ++ G+R I +TG ++ AV
Sbjct: 725 GTHLTRTGHIGHMAIIAEEAIAKGIRRIVAVTGHEAQKAV 764
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 68/107 (63%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +F G RV NSQKCIR GGKHNDL G+D
Sbjct: 33 IPLDDPTLLFANAGMNQFKPIFQGCVDPNSEMGRLVRVVNSQKCIRAGGKHNDLDDVGKD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ A E LT+ LP DR+Y ++
Sbjct: 93 VYHHTFFEMLGNWSFGDYFKKETIEWAWELLTE-VYKLPKDRMYVSY 138
>gi|358372805|dbj|GAA89407.1| alanyl-tRNA synthetase [Aspergillus kawachii IFO 4308]
Length = 961
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 279/809 (34%), Positives = 416/809 (51%), Gaps = 82/809 (10%)
Query: 10 VRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPY 69
+ SK +R +FL YF GHT V SSP+VP+ D ++ F N+GM QFK++FLG T P+
Sbjct: 9 LEWTSKRVRDTFLQYF-KENGHTFVASSPVVPHSDPTLLFTNAGMNQFKSIFLG-TVDPH 66
Query: 70 PRVAN------SQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALE 123
AN +QKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K +A R + E
Sbjct: 67 SDFANLKSAVNTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKEEAIRYSWE 126
Query: 124 FLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMG 183
LTK L RLY TYF G+ + GL D E +D+W +GVP DHI MK NFWEMG
Sbjct: 127 LLTKI-YGLDPGRLYVTYFEGNKEGGLEPDLEAKDLWKAVGVPEDHILPGNMKDNFWEMG 185
Query: 184 STGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYI 243
GPCG SEIHYD G ++A VN D +++EIWN VFI + R + ++ PL ++
Sbjct: 186 DQGPCGPCSEIHYDRVGGRNAAHL-VNQDDPNVLEIWNNVFIQYNRETDRSLRPLPNKHV 244
Query: 244 DTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRML 303
DTG+GFERLV+ILQNK+S YDTD+F P+ +TI V+GA+ Y +F + + +DT+YR++
Sbjct: 245 DTGMGFERLVSILQNKSSNYDTDVFTPIFQTIRDVTGAREYRGSFGSDDSDGIDTAYRVI 304
Query: 304 SDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL 360
+D+ R + A++D P+ + +R V+R + F V+ G ++ + + L
Sbjct: 305 ADHVRTLMFAISDGAVPNNDGRGYVIRRVLRRGARYARKYFGVEIGNFFSKIVPTVVDQL 364
Query: 361 GDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
GD++PE++ + IL EE F K L + + + E +
Sbjct: 365 GDMFPELRRKQPDVMEILDEEEMSFA----------KTLDRGERQFEHY----------- 403
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
Q A+ ++ G + LYDT+G ++ + +A + L + FE+ + K
Sbjct: 404 -----AQQAKAKGADKLHGADVWRLYDTFGFPVDLTRIMAEERGLQIDDREFEEARSRAK 458
Query: 481 ERSKA--KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV-IG 537
E SK K ++ +D+ DL +D K D DT G I
Sbjct: 459 EASKGQKKTSAETVKLDVHDLGKLEAMNDVPKTD---------------DTAKFGKGNIT 503
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
QV I + + H+ + D QL G+I D+TN YA GGQ +D G + +
Sbjct: 504 AQVKAIYQGKMFHSSTDEVPDGEQL------GIILDRTNFYAEQGGQENDTGKIVIDGQS 557
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+ +E+G++ G ++H G + ++ G T E D R HT +H+LN
Sbjct: 558 E----LEVGDVQLYAGYVLHTG-FMKYGSISVGDTVICEYDELRRWPIRNNHTGTHILNF 612
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL QK V +++ DFS + +S +A +E+ + I V + +
Sbjct: 613 ALRTVLGDGVEQKGSLVAAEKLRFDFS-HKSAISDKDLARIEEISTEYIRQNCTVYSQEL 671
Query: 717 RASELPFLTHLTVIPGEIYPDDV-----------ILIDISD-KENVISREPCCGTHVFNT 764
+ ++ + + GE YPD V IL ++ D + +S E C GTHV T
Sbjct: 672 PLATAREISGVRAVFGETYPDPVRVVSVGVELGEILQNVKDPRWKEVSIEFCGGTHVQKT 731
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
G I+ V+ G+R I +TG+ +
Sbjct: 732 GDIKDLIVLEEGGIAKGIRRIIAVTGEDA 760
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 73/108 (67%), Gaps = 8/108 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVAN------SQKCIRVGGKHNDLSFAGR 871
+P+ D ++ F N+GM QFK++FLG T P+ AN +QKCIR GGKHNDL G+
Sbjct: 38 VPHSDPTLLFTNAGMNQFKSIFLG-TVDPHSDFANLKSAVNTQKCIRAGGKHNDLDDVGK 96
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
DSYHHTFFEMLGNWSF DY+K +A R + E LTK L RLY T+
Sbjct: 97 DSYHHTFFEMLGNWSFGDYFKEEAIRYSWELLTK-IYGLDPGRLYVTY 143
>gi|350584879|ref|XP_003126924.3| PREDICTED: alanyl-tRNA synthetase, cytoplasmic [Sus scrofa]
Length = 956
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 274/783 (34%), Positives = 398/783 (50%), Gaps = 82/783 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDSKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRETDGVLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGADDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDLMDLKH-----FPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ ++ TDD KY+YH D+ S Y F ++ +
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRERGLEATDDSPKYNYHSDS-SGSYVFESAVATVMALR- 510
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
D+ + +G G++ DKT YA GGQI D G + + +
Sbjct: 511 ------RDRMFVEEVCTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + S KV G R+ +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGSLKV--GDQVRLFIDEPRRRPVMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL Q+ V D DF+ G +S + E+ N++I V ++
Sbjct: 612 NFALRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTQQIKKAEELANEMIEAAKPVYAQN 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLQN 730
Query: 764 TGH 766
+ H
Sbjct: 731 SSH 733
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 137
>gi|448101964|ref|XP_004199688.1| Piso0_002228 [Millerozyma farinosa CBS 7064]
gi|359381110|emb|CCE81569.1| Piso0_002228 [Millerozyma farinosa CBS 7064]
Length = 960
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 289/842 (34%), Positives = 424/842 (50%), Gaps = 103/842 (12%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
+ +RS+FLD+F N + HT V SS +VP+ D S+ F N+GM Q+K +FLG A
Sbjct: 19 TASKVRSTFLDFFKN-KNHTFVPSSSVVPHNDPSLLFANAGMNQYKPIFLGTVDPSSEFA 77
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
R NSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K+DA A + LT+
Sbjct: 78 TLKRAVNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKDAIAWAWKLLTE 137
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
L DRLY TYF G ++ GL D E +++WL++GVP DHI K NFWEMG GP
Sbjct: 138 E-YKLEKDRLYVTYFEGDEKNGLEPDLEAKELWLKVGVPEDHILPGNAKDNFWEMGDQGP 196
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIHYD G ++A + VN D D+IE+WNIVFI + R + ++ PL +IDTG+
Sbjct: 197 CGPCSEIHYDRIGGRNAA-SLVNEDDPDVIEVWNIVFIQYNREADSSLRPLPAKHIDTGM 255
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV+ILQNK+S YDTD+F P+ I +V+G +PY F + ++ +DT+YR+++D++
Sbjct: 256 GFERLVSILQNKSSNYDTDVFTPIFNKIREVTGVRPYTGKFGSEDKDGIDTAYRVIADHA 315
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T A++D P+ + LR ++R G +++ I E D++
Sbjct: 316 RTLTFAISDGGVPNNEGRGYVLRRILRRGARYVRKYMNYPIGSFFQQIIPVIIERNSDIF 375
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI +++ IL EE F K L + + EQ+ I+
Sbjct: 376 PEISKYQEELKEILNEEELSFA----------KTLDRGEKLFEQYAII------------ 413
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
++ P T +SG + LYDTYG ++ + +A + E FE+ E +E SK
Sbjct: 414 ---ASKTPEQT-LSGRDVWRLYDTYGFPVDLTRLMAEEAGTKIDEEGFEKARLESREASK 469
Query: 485 A---KAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV- 535
+ K+ + +D+ +D K P TDD YKY LD IV
Sbjct: 470 SNNSKSGNQPMKLDVHALSDLDNKQIPKTDDSYKY--------------GLDNVKAKIVE 515
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
I D +D +IDS + E+ G++ DKT YA GGQ D G +
Sbjct: 516 IFDGSGFVD-----------TIDSTEKEY----GILLDKTAFYAEQGGQEYDTGKLVIDG 560
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVS-SFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+ + N + + G ++H G +V S KV G + R HT +H+
Sbjct: 561 SAEFN----VTNVQVYGGYVLHTGTLVEGSLKV--GNEVIATYNELRRWPIRNNHTGTHV 614
Query: 655 LNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN ALR VL + QK V ++ DFS + + ++ + + +E N I +V
Sbjct: 615 LNFALREVLGDSVDQKGSLVAPEKLRFDFS-HKKAVTTEELNKIEDISNHYIKEDKKVFA 673
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHV 761
+ + SE + L + GE YPD V ++ I + ++P C GTHV
Sbjct: 674 KDVSLSEARSINGLRAVFGETYPDPVRVVSIGVPVEDLLKDPSNSQWHKYSIEFCGGTHV 733
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFS-QILNVGNIPY 820
T I+ +I G+R I +TG+ + AA F ++ +P+
Sbjct: 734 AKTAEIKHLVIIEESGIAKGIRRIVAVTGNEAYEV------QRVAADFEDELKKASELPF 787
Query: 821 GD 822
G+
Sbjct: 788 GE 789
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D S+ F N+GM Q+K +FLG A R NSQKCIR GGKHNDL GRD
Sbjct: 45 VPHNDPSLLFANAGMNQYKPIFLGTVDPSSEFATLKRAVNSQKCIRAGGKHNDLEDVGRD 104
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K+DA A + LT+ L DRLY T+
Sbjct: 105 SYHHTFFEMLGNWSFGDYFKKDAIAWAWKLLTE-EYKLEKDRLYVTY 150
>gi|317157868|ref|XP_001826622.2| alanyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
Length = 1015
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 275/821 (33%), Positives = 420/821 (51%), Gaps = 92/821 (11%)
Query: 3 NPNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFL 62
N NI S +KS+R +F+ YF GHT V S+P+VP+ D ++ F N+GM QFK++FL
Sbjct: 56 NSNIQSSPEWTAKSVRDAFIQYF-QKNGHTFVASAPVVPHSDPTLLFTNAGMNQFKSIFL 114
Query: 63 GLTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDA 117
G A N+QKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 115 GTVDPQSDFANLKSAVNTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEA 174
Query: 118 CRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKC 177
+ E +TK L RLY TYF GS + GL D E +++W +GVP DHI MK
Sbjct: 175 INYSWELMTKI-YGLDPQRLYVTYFEGSKEGGLSPDLEAKELWKAVGVPEDHILPGNMKD 233
Query: 178 NFWEMGSTGPCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIV 236
NFWEMG GPCG SEIHYD + G +S L VN D +++EIWN VFI + R S ++
Sbjct: 234 NFWEMGDQGPCGPCSEIHYDRIGGRNASNL--VNQDDPNVLEIWNNVFIQYNRESDRSLK 291
Query: 237 PLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL 296
PL ++DTG+GFERLV++LQNK+S YDTD+F PL +TI+ ++GA+PY F + +
Sbjct: 292 PLPNKHVDTGMGFERLVSVLQNKSSNYDTDVFSPLFQTIKDITGARPYQGRFGVEDADGI 351
Query: 297 DTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELS 353
DT+YR+++D+ R +T A++D + P+ + +R V+R + F+V+ G ++
Sbjct: 352 DTAYRVVADHVRTLTFAISDGVAPNNEGRGYVIRRVLRRGARYARKYFRVEIGNFFSKIV 411
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+ + +GD++PE++ + IL EE F K L + + + E +
Sbjct: 412 PTLVDQMGDMFPEVKRKQQDVMEILDEEEISFA----------KTLDRGERQFEHY---- 457
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
Q A+ ++ G + LYDT+G ++ + +A + L + FE
Sbjct: 458 ------------AQQAKAKGDDKLHGADVWRLYDTFGFPVDLTRIMAEERGLRIDDTEFE 505
Query: 474 QKLNELKERSKA--KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFP 525
+ + KE SK KAA++ +D+ DL P T+D K+D
Sbjct: 506 EARSRAKEASKGQKKAAADTVKLDVHDLGKLEKMNDVPKTNDSAKFDR------------ 553
Query: 526 CLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQI 585
N+ V AI H +S + + Q+ +GLI D+TN YA GGQ
Sbjct: 554 ---GNITAQV----------KAIYHGKS-FHLSTEQIPEGDQLGLILDRTNFYAEQGGQE 599
Query: 586 DDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
+D G + + +E+G++ G ++H G + ++ G E D R
Sbjct: 600 NDTGRIVIDGQAE----LEVGDVQLYAGYVLHTG-FMKYGSLSVGDEVICEYDELRRWPI 654
Query: 646 MRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
HT +H+LN AL+ VL QK V +++ DFS + ++ + +E +
Sbjct: 655 RNNHTGTHILNFALKEVLGDGVEQKGSLVAAEKLRFDFS-HKSPVTDKDLERIEDISTEY 713
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDV-----------ILIDISD-KENVIS 752
I V + + + ++ + + GE YPD V IL ++ D + +S
Sbjct: 714 IRQNCAVYSQEVPLATARQISGVRAVFGETYPDPVRVVSVGVELEEILKNVKDPRWEKVS 773
Query: 753 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
E C GTHV TG I+ ++ G+R I +TG+ +
Sbjct: 774 IEFCGGTHVQKTGDIKELVILEESGIAKGIRRIIAVTGEDA 814
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK++FLG A N+QKCIR GGKHNDL G+D
Sbjct: 92 VPHSDPTLLFTNAGMNQFKSIFLGTVDPQSDFANLKSAVNTQKCIRAGGKHNDLDDVGKD 151
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E +TK L RLY T+
Sbjct: 152 SYHHTFFEMLGNWSFGDYFKKEAINYSWELMTK-IYGLDPQRLYVTY 197
>gi|358059531|dbj|GAA94688.1| hypothetical protein E5Q_01341 [Mixia osmundae IAM 14324]
Length = 1005
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 281/825 (34%), Positives = 413/825 (50%), Gaps = 92/825 (11%)
Query: 5 NISSYVRLCSKS----------IRSSFLDYFCNTQG--HTLVKSSPIVPYGDDSIAFVNS 52
+++S R+ S S +R++F+DYF + + HT V SS +PY D ++ F N+
Sbjct: 40 SLASLARMASTSSQFGDWPASKVRATFIDYFEHHKDLPHTFVPSSSTIPYNDPTLMFANA 99
Query: 53 GMCQFKNVFLGLTPAPY---PRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSF 109
GM Q+K FLG P R ANSQKC+R GGKHND+ G+D+YHHT+FEMLGNWSF
Sbjct: 100 GMNQYKACFLGTAEGPLGALKRAANSQKCIRAGGKHNDIDDVGKDTYHHTYFEMLGNWSF 159
Query: 110 NDYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDH 169
DY+K+DA + LTK LP DRLY TYF G GL DEETR +WL+LGV DH
Sbjct: 160 GDYFKQDALSLGWTLLTKV-YGLPADRLYVTYFEGDQSQGLVPDEETRQLWLDLGVAEDH 218
Query: 170 IKKEGMKCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKR 229
+ K K NFWEMG+TGPCG +EIHYD G ++A VN D ++E+WN+VFI + R
Sbjct: 219 LIKGNAKDNFWEMGATGPCGPCTEIHYDRVGGRNAA-HLVNMDDPLVLEVWNLVFIQYNR 277
Query: 230 VSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFT 289
+++ L ++DTG+GFERLV++LQ+K S YDTD+F PL I++++GA+PYG
Sbjct: 278 EEDNSLRNLPAKHVDTGMGFERLVSVLQDKPSNYDTDVFAPLFAKIQEMTGARPYGGKLG 337
Query: 290 TSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQG 346
++ ++DT+YR+++D+ R +T ALAD P + LR ++R F V G
Sbjct: 338 KEDQGEIDTAYRVVADHVRTLTFALADGGVPSNVGRGYVLRRILRRGCRYIRKKFDVPIG 397
Query: 347 KLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPEL 406
L + + +G +PEI S I+ IL EE F L
Sbjct: 398 SFFSTLMPTVVDQMGGFFPEITKSATDIKEILDEEEVAFART-----------------L 440
Query: 407 EQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLT 466
++ M E L R TE+SG + LY+TYG ++ +A + L+
Sbjct: 441 DRGEKMFE---------LYADQTRAKGKTELSGKDVWRLYETYGFPVDLTLLMAEEQGLS 491
Query: 467 LCHEAFEQKLNELKERSKA---KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT 523
+ F+ E SKA K +N +D+ DL TD K D + +Y+
Sbjct: 492 YNQKEFDAAQAHSIEVSKAGIKKEGANAIKLDVHDLGKLDSTDSVKKTD-----DDAKYS 546
Query: 524 FPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGG 583
LD + AI H RS ++ +E G++ D+T LYA +GG
Sbjct: 547 ETQLDATI--------------KAIYHDRSFVD-NTSSIEQGKPFGILLDRTCLYAESGG 591
Query: 584 QIDDIGVAYLTNTTQENGKVE--IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
Q +D G + GK E + ++ + +G ++H G + ++ G + +D
Sbjct: 592 QENDTGTIVIA------GKAEFLVQDVQAYKGYVLHVGTLTEG-SLSVGDAVVISLDELR 644
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R HT +H+LN ALR VL QK V + DFS G + + + +E+
Sbjct: 645 RWPIKNNHTGTHILNFALREVLGDHVEQKGSLVAPAKLRFDFSNKG-GIPLQELQKIEEI 703
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKE 748
N I V V + ++ + + L + GE YPD V ++ + + K
Sbjct: 704 CNAWIKKNVPVYSKEVKLDDAKAIPGLRAVFGEAYPDPVRVVALEFSVEEMAKDLKNPKW 763
Query: 749 NVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
S E C GTHV TG I+S ++ G+R I +TGD +
Sbjct: 764 RSTSVEFCGGTHVNRTGDIQSLVIVEEFGTAKGIRRITAVTGDEA 808
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 71/105 (67%), Gaps = 4/105 (3%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPY---PRVANSQKCIRVGGKHNDLSFAGRDSY 874
IPY D ++ F N+GM Q+K FLG P R ANSQKCIR GGKHND+ G+D+Y
Sbjct: 87 IPYNDPTLMFANAGMNQYKACFLGTAEGPLGALKRAANSQKCIRAGGKHNDIDDVGKDTY 146
Query: 875 HHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHT+FEMLGNWSF DY+K+DA + LTK LP DRLY T+
Sbjct: 147 HHTYFEMLGNWSFGDYFKQDALSLGWTLLTK-VYGLPADRLYVTY 190
>gi|134083795|emb|CAK47129.1| unnamed protein product [Aspergillus niger]
Length = 961
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 284/818 (34%), Positives = 418/818 (51%), Gaps = 88/818 (10%)
Query: 2 NNPNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVF 61
N+P + SK +R +FL YF GHT V SSP+VP+ D ++ F N+GM QFK++F
Sbjct: 5 NDPKLE----WTSKRVRDTFLQYF-KENGHTFVASSPVVPHSDPTLLFTNAGMNQFKSIF 59
Query: 62 LGLTPAPYPRVAN------SQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKR 115
LG T P+ AN SQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K+
Sbjct: 60 LG-TVDPHSDFANLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKK 118
Query: 116 DACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGM 175
DA R + E LTK L RLY TYF G+ + GL D E +D+W +GVP DHI M
Sbjct: 119 DAIRYSWELLTKI-YGLDPRRLYVTYFEGNKEGGLEPDLEAKDLWKAVGVPEDHILPGNM 177
Query: 176 KCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTI 235
K NFWEMG GPCG SEIHYD G ++A VN D +++EIWN VFI + R + ++
Sbjct: 178 KDNFWEMGDQGPCGPCSEIHYDRIGGRNAAHL-VNQDDPNVLEIWNNVFIQYNRETDRSL 236
Query: 236 VPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTD 295
PL ++DTG+GFERLV++LQNK+S YDTD+F P+ +TI V+GA+ Y F + +
Sbjct: 237 RPLPNKHVDTGMGFERLVSVLQNKSSNYDTDVFTPIFQTIRDVTGAREYRGCFGSDDADG 296
Query: 296 LDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKEL 352
+DT+YR+++D+ R + A++D P+ + +R V+R + F V+ G ++
Sbjct: 297 IDTAYRVIADHVRTLMFAISDGAVPNNDGRGYVIRRVLRRGARYARKYFGVEIGNFFSKI 356
Query: 353 SYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIM 412
+ + LGD++PE++ + IL EE F K L + + + E +
Sbjct: 357 VPTVVDQLGDMFPELRRKQPDVMEILDEEEMSFA----------KTLDRGERQFEHY--- 403
Query: 413 EEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF 472
Q A+ ++ G + LYDT+G ++ + +A + L + F
Sbjct: 404 -------------AQQAKAKGADKLHGADVWRLYDTFGFPVDLTRIMAEERGLQIDDREF 450
Query: 473 EQKLNELKE--RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
E+ + KE R + K ++ +D+ DL +D K D DT
Sbjct: 451 EEARSRAKEASRGQKKTSAETVKLDVHDLGKLEAMNDVPKTD---------------DTA 495
Query: 531 LVGIV-IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
G I QV I H+ + D QL G+I D+TN YA GGQ +D G
Sbjct: 496 KFGKGNITAQVKAIYHGKTFHSSTDEVPDGEQL------GIILDRTNFYAEQGGQENDTG 549
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRA 648
+ ++ +E+G++ G ++H G + SF V G T E D R
Sbjct: 550 KIVIDGQSE----LEVGDVQLYAGYVLHTGFMKYGSFSV--GDTVICEYDELRRWPIRNN 603
Query: 649 HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
HT +H+LN ALR VL QK V +++ DFS + +S +A +E+ + I
Sbjct: 604 HTGTHILNFALRTVLGDGVEQKGSLVAAEKLRFDFS-HKSAISDKDLARIEEISTEYIRQ 662
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPDDV-----------ILIDISD-KENVISREP 755
V + + + ++ + + GE YPD V IL ++ D + +S E
Sbjct: 663 NCTVYSQELPLATAREISGVRAVFGETYPDPVRVVSVGVELGEILQNVKDPRWKEVSIEF 722
Query: 756 CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
C GTHV TG I+ V+ G+R I +TG+ +
Sbjct: 723 CGGTHVQKTGDIKDLIVLEEGGIAKGIRRIIAVTGEDA 760
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 74/108 (68%), Gaps = 8/108 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVAN------SQKCIRVGGKHNDLSFAGR 871
+P+ D ++ F N+GM QFK++FLG T P+ AN SQKCIR GGKHNDL G+
Sbjct: 38 VPHSDPTLLFTNAGMNQFKSIFLG-TVDPHSDFANLKSAVNSQKCIRAGGKHNDLDDVGK 96
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
DSYHHTFFEMLGNWSF DY+K+DA R + E LTK L RLY T+
Sbjct: 97 DSYHHTFFEMLGNWSFGDYFKKDAIRYSWELLTK-IYGLDPRRLYVTY 143
>gi|354479027|ref|XP_003501715.1| PREDICTED: LOW QUALITY PROTEIN: alanyl-tRNA synthetase,
mitochondrial-like [Cricetulus griseus]
Length = 980
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 280/829 (33%), Positives = 424/829 (51%), Gaps = 108/829 (13%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
+ ++R +FL +F + GH LV S+ + P GD S+ FVN+GM QFK +FLG A
Sbjct: 34 AAAVRDTFLSFFRDRHGHQLVPSASVRPRGDHSLLFVNAGMNQFKPIFLGTVDPRSEMAG 93
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN-DYYKRDACRMALEFLTK 127
+ RVANSQKCVR GG+HNDL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+
Sbjct: 94 FRRVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACGMAWELLTQ 153
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
+P DRL+ +YFGG + GL D ETRD+WL LGVP + G++ NFWEMG TGP
Sbjct: 154 V-YGIPEDRLWVSYFGGDTKTGLAPDLETRDVWLSLGVPASRVLSFGLQENFWEMGDTGP 212
Query: 188 CGYSSEIHYDMK---GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
CG +EIHYD+ G P L+E+WN+VF+ H R + ++ PL + ++D
Sbjct: 213 CGPCTEIHYDLAEGVGAP------------QLVELWNLVFMQHCREAGGSLQPLPQRHVD 260
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
TG+G ERLV +LQ + STYDTDLF PLL I + G +PY ++ +DT+YR+++
Sbjct: 261 TGMGLERLVAVLQGRRSTYDTDLFSPLLSAIHQGCGVRPYSGRVGPADEGRIDTAYRVVA 320
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D+ R ++V +AD +FP + LR ++R A+ S +V + G + L + E LG
Sbjct: 321 DHIRTLSVCIADGVFPGMSGAPLILRRILRRAVRFSTEVLRAPPG-FLGSLVPVVVETLG 379
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
YPE+Q + +I ++ E+ F A+++ + ++ V
Sbjct: 380 AAYPELQKNSAQIASLVSEDEAAF----LASLQRGRRIIDRT-----------------V 418
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
K L D E++ + +L G+ ++++ + K + L E+ L + +
Sbjct: 419 KRLGPS---DLFPAEVA--WSLSLSGNLGIPLDLVELMLEEKGVQLDTAGLEE-LAQKEA 472
Query: 482 RSKAKAASNVPD----IDLMDLKHF-----PVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
+ +A+ A VP+ +D+ L+ P TDD KY+Y N Y F + ++
Sbjct: 473 QHRAQQAEPVPEEGLCLDVHTLEELHRHGVPPTDDSPKYNYSLQPNGD-YEFGLCEAQVL 531
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
Q++ D A+ AS+ + Q GL+ D+TN YA GGQ D G Y
Sbjct: 532 ------QLYSEDGTAV------ASVGAGQR-----CGLLLDRTNFYAEQGGQASDRG--Y 572
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
L T Q++ + G I+H +V G ++ VD R+GCM HT +
Sbjct: 573 LVRTGQQDVLFPVARAQVCGGFILHEAVATECLQV--GEQVQLYVDEAWRMGCMVKHTAT 630
Query: 653 HLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGET-LSVDSVAAVEKYINDVIANQVQV 711
HLL+ ALR+ L T ++ + E L F V + L+ + + VE Y+ + +
Sbjct: 631 HLLSWALRKTLGPTTEQRGSHLNPE-RLRFDVATQAPLTTEQLRTVESYVQEAVRQD--- 686
Query: 712 DRRHMRASELPFLTHLTVIPG-----EIYPDDV-----------ILIDISDKENVISREP 755
+ + E+P L H +PG E+YPD V L S S E
Sbjct: 687 --KAVYMEEVP-LAHTAHVPGLRSLDEVYPDPVRVVSVGVPVAHALAPDSQAALQTSVEL 743
Query: 756 CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
CCGTH+ TG + +IG + G+ + +TG+ ++ A E G+ LS
Sbjct: 744 CCGTHLLRTGAMGDLVIIGGRQLVKGITRLLAITGEQAQQARELGQSLS 792
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RVANSQKC+R GG+HNDL GRD
Sbjct: 61 PRGDHSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDL 120
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P DRL+ ++
Sbjct: 121 SHHTFFEMLGNWAFGGEYFKEEACGMAWELLTQ-VYGIPEDRLWVSY 166
>gi|395508649|ref|XP_003758622.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Sarcophilus harrisii]
Length = 968
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 287/825 (34%), Positives = 417/825 (50%), Gaps = 82/825 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F Q HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNQ-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG++ GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVNRLYVTYFGGNEAAGLEPDLECKQIWQNLGLEDSKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G+ +A VN D +++EIWN+VFI R + ++ PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGDRDAA-HLVNQDDPNVLEIWNLVFIQFNRETDGSLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +G + Y + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGVRQYTGQVGADDVDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R +TVALAD PD T + LR ++R A+ S + K+G L + + LGD
Sbjct: 302 ARTLTVALADGGRPDNTGRGYVLRRILRRAIRYSHEKLNAKRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMNGFEEERKLAQLKS 452
Query: 482 RSKAKAAS-----NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ I+ + +K VTDD KY+Y D+ S Y F N + V
Sbjct: 453 QGKGAGGEDHIMLDIYAIEELRVKGLKVTDDSLKYNYRSDS-SGTYEF----ENPMATV- 506
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
A+R R +D + G++ DKT YA GGQI D G + +
Sbjct: 507 ---------QALR--REKMFVDEVSTGQEC--GVVLDKTCFYAEQGGQIYDEGFLVKEDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + + G ++H G V S +V G R+ +D R M HT +H+L
Sbjct: 554 SSEDKTEFTVKDAQVRGGYVLHIGTVYGSLRV--GDRVRLFIDEPRRRPVMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL Q+ V D DF+ +S + EK N +I V +
Sbjct: 612 NFALRSVLGEADQRGSLVAPDRLRFDFTAKA-AMSTQQIKETEKIANGMIEAAKPVYAQD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 671 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGIPVTKLLDDPSGPAGSLTSVEFCGGTHLQN 730
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H + ++ ++ G+R I +TG ++ A+ L T+ S
Sbjct: 731 SSHAGALVIVSEEAIAKGIRRIVAVTGTEAQKALRKADSLKTSLS 775
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVNRLYVTY 137
>gi|73973034|ref|XP_532155.2| PREDICTED: alanyl-tRNA synthetase, mitochondrial [Canis lupus
familiaris]
Length = 985
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 283/817 (34%), Positives = 407/817 (49%), Gaps = 84/817 (10%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----AP 68
+ ++R +FL +F + GH LV S+ + P GD S+ FVN+GM QFK +FLG + P A
Sbjct: 39 ATAVRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVNPRSEMAG 98
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSF-NDYYKRDACRMALEFLTK 127
+ RVANSQKCVR GG+HNDL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+
Sbjct: 99 FRRVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ 158
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
+P DRL+ +YFGG + GL D E+RDIWL LGV H+ G + NFWEMG TGP
Sbjct: 159 -VYGIPKDRLWVSYFGGDPKAGLDPDLESRDIWLNLGVHASHVLSFGPEENFWEMGDTGP 217
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG +EIHYD+ G RV A + L+E+WN+VFI H R + ++ PL + ++DTG+
Sbjct: 218 CGPCTEIHYDLAG-------RVGAPQ--LVELWNLVFIQHNRETDGSLQPLPQRHVDTGM 268
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ERLV +LQ STYDTDLF PLL+ I + GA PY +++ D +YR+++D+
Sbjct: 269 GLERLVAVLQGTPSTYDTDLFSPLLKAIHQGCGAPPYLGQVGAADKGRTDMAYRVVADHI 328
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++V +AD ++P + LR ++R A+ S +V + G + L + EILGD Y
Sbjct: 329 RTLSVCIADGVYPGMSGAPLVLRRILRRAVRFSTEVLQAPPG-FLGSLVPVVVEILGDTY 387
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+Q +I ++ EE F + + ++ E F P V L
Sbjct: 388 PELQKHSAQIASLVSEEEAAFLASLQRGRRIIDQTLRCLGPSELF-----PAEVAWSLSL 442
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ L + E+ + D+ GL++ L E + + + + +
Sbjct: 443 SGNLGLPLDLVELMLEEKGVQLDSAGLAR-------------LAQEEAKLRSRQAEPVQR 489
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
NV + + + P TDD KY+Y + PC L Q++ D
Sbjct: 490 QGLQLNVHALGELQRRGVPPTDDSPKYNYSLRPSGGYEFNPCEAQVL-------QLYLED 542
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
A+ G +H GL+ DKTN YA GGQ D G YL QE+
Sbjct: 543 GTAVASVGKG--------QH---CGLLLDKTNFYAEQGGQASDRG--YLVRVGQEDVLFP 589
Query: 605 IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL- 663
+ G I+H KV G ++ VD RLGCM HT +HLLN ALR+ L
Sbjct: 590 VARAQICGGFILHEAVAPEGLKV--GDQVQLHVDEAWRLGCMEKHTATHLLNWALRQALG 647
Query: 664 TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPF 723
T Q+ + + D + L+ + + AVE + + + V +M E
Sbjct: 648 PGTEQRGSHLNPERLRFDVATQA-PLTPEQLQAVEGTVQEAVGQDEAV---YM---EEVA 700
Query: 724 LTHLTVIPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGHI 767
L H +PG E+YPD V L S S E CCGTH+ TG +
Sbjct: 701 LAHTAHVPGLRSLDEVYPDPVRVVSVGVPVARALDPASQAALQTSVELCCGTHLLRTGAV 760
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
+IG + G + +TG+ ++ A E G+ L+
Sbjct: 761 GDLVIIGERQLTKGTVRLLAVTGEQAQQAREVGQSLA 797
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 76/107 (71%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG + P A + RVANSQKC+R GG+HNDL GRD
Sbjct: 66 PRGDPSLLFVNAGMNQFKPIFLGTVNPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P DRL+ ++
Sbjct: 126 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPKDRLWVSY 171
>gi|189217804|ref|NP_001121342.1| alanyl-tRNA synthetase [Xenopus laevis]
gi|171846704|gb|AAI61712.1| LOC100158432 protein [Xenopus laevis]
Length = 968
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 280/815 (34%), Positives = 413/815 (50%), Gaps = 84/815 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
+ + IR F+D+F + GHT V SS VP D ++ F N+GM QFK +FL +P
Sbjct: 5 MTASEIRQKFIDFFKDN-GHTYVHSSATVPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC++AL+ LT
Sbjct: 64 AKLTRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKLALDLLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K + ++RLY TYFGG++ GL D E + IWL LG+ I MK NFWEMG TG
Sbjct: 124 KE-FGIDIERLYVTYFGGNEAAGLEPDLECKQIWLNLGLAESRILPGSMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIH+D G +A VN D +++EIWN+VFI R + T+ PL K IDTG
Sbjct: 183 PCGPCSEIHFDRIGGRDAA-HLVNMDDPNVLEIWNLVFIQFNRETDGTLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGDEDVDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ + + +G L + + LG+
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASKG-FFSTLVDVVVQSLGNA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ +E F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINDEETQF--------------LKT--------------LNRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L +++ I GD A+ LYDTYG ++ +A + LTL E+FE++ + +S
Sbjct: 393 LDRKIQSLGEHKVIPGDTAWLLYDTYGFPVDLTSLIAEERGLTLDMESFEEERKAAQLKS 452
Query: 484 KAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ K A + D+ ++D+ + TDD KY Y + Y F NL+ V
Sbjct: 453 QGKGAGD-EDLLMLDIYAIEELRSRGLEPTDDLPKYTYTSNAEGV-YEF----DNLLATV 506
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLT 594
+ +K + A +G GL+ DKT YA GGQ D G +
Sbjct: 507 ---KAIRREKMFVEEASTGQE-----------CGLVLDKTCFYAEQGGQTYDEGYMVKEE 552
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
++++ + + G ++H G + + KV G + +D R M HT +H+
Sbjct: 553 ESSEDKTEFTVRNTQVRGGYVLHVGTLYGNLKV--GDQVHLYIDEPKRRPIMSNHTATHI 610
Query: 655 LNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
LN ALR VL Q+ V D DF+ G ++ + E+ ND+I V
Sbjct: 611 LNFALRSVLGEADQRGSLVAPDRLRFDFTAKG-AMTTQEIRKTEEIANDIIKENKVVYAL 669
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVF 762
+ + L + E YPD V ++ I S +V S E C GTH+
Sbjct: 670 DCPLATAKAIQGLRAVFDETYPDPVRVVSIGIPVEDLLADPSSPAGSVTSVEFCGGTHLK 729
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
N+GH ++ ++ G+R I +TG ++ A+
Sbjct: 730 NSGHAGPFIIVTEEAIAKGIRRIVAVTGAEAQKAL 764
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 VPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLTRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC++AL+ LTK + ++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKLALDLLTK-EFGIDIERLYVTY 137
>gi|241956830|ref|XP_002421135.1| alanyl-tRNA synthetase, putative [Candida dubliniensis CD36]
gi|223644478|emb|CAX41294.1| alanyl-tRNA synthetase, putative [Candida dubliniensis CD36]
Length = 969
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 289/842 (34%), Positives = 421/842 (50%), Gaps = 103/842 (12%)
Query: 4 PNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG 63
PN S++ + +RS+FLDYF Q HT V SS +VP+ D ++ F N+GM Q+K +FLG
Sbjct: 18 PNGSNH--WTASKVRSTFLDYFKQQQ-HTYVPSSSVVPHNDPTLLFANAGMNQYKPIFLG 74
Query: 64 LTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDAC 118
A R ANSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A
Sbjct: 75 TVDPASDFASLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAI 134
Query: 119 RMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCN 178
+ E LTK L DRLY TYFGG ++ GL D E ++ WL++GVP DHI +K N
Sbjct: 135 DYSWELLTKV-YGLKEDRLYVTYFGGDEKQGLEPDLEAKNFWLKVGVPEDHILPGSVKDN 193
Query: 179 FWEMGSTGPCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVP 237
FWEMG GPCG SEIHYD + G +S L VN D ++IE+WN+VFI + R + +
Sbjct: 194 FWEMGDQGPCGPCSEIHYDRIGGRNASDL--VNMDDPNVIEVWNVVFIQYNREADGNLRT 251
Query: 238 LSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLD 297
L +IDTG+GFERLV+ILQNK S YDTD+FLP+ + I +++G +PY F ++ +D
Sbjct: 252 LPNKHIDTGMGFERLVSILQNKFSNYDTDVFLPIFDKIREITGVRPYTGKFGNEDKDGID 311
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSY 354
T+YR+++D+ R +T A+ D P+ + LR ++R G ++L
Sbjct: 312 TAYRVIADHVRTLTFAICDGGVPNNEGRGYVLRRILRRGSRYVRKYMNYPIGGFFQQLVD 371
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
+ E +++PEI ++ IL EE F K L + + EQ+ I+
Sbjct: 372 VVIEQNKEIFPEISSGAQDLKEILNEEELSFA----------KTLDRGEKLFEQYAII-- 419
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
++ P T +SG + LYDTYG ++ + +A L + + FE+
Sbjct: 420 -------------ASKTPEQT-LSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEDGFER 465
Query: 475 KLNELKERSKA---KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFP 525
E +E SK K + +D+ L P T+D++K Y
Sbjct: 466 AKEESREASKGSGTKDGKTLVKLDVHALSELDQNDTIPKTNDEFK-----------YGLE 514
Query: 526 CLDTNLVGIVIGDQ-VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQ 584
+ +VGI G + V I+ +I++ G++ DKT YA GGQ
Sbjct: 515 NVKAKVVGIYDGSKFVESIEDPSIQY------------------GILLDKTPFYAEQGGQ 556
Query: 585 IDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLG 644
D G + ++ N + + G ++H GN+V K+ G D R
Sbjct: 557 EYDTGKLVIDGKSEFN----VANVQVYAGYVLHTGNIVDG-KLNVGDEIIATYDELRRWP 611
Query: 645 CMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIND 703
HT +H+LN ALR VL QK V ++ DFS Y + ++ + +E N
Sbjct: 612 IRNNHTGTHILNFALREVLGDGVDQKGSLVAPEKLRFDFS-YKQAVTPKELEKIEAISNK 670
Query: 704 VIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKENV----I 751
I N +V + + ++ + L + GE YPD V ++ I +D N I
Sbjct: 671 YIKNNDKVYYKDVSLTKAKEINGLRAVFGETYPDPVRVVSIGVSVDDLLADPTNAKWHEI 730
Query: 752 SREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHLSTAA 807
S E C GTHV TG I+ ++ G+R I +TG + K A E + + AA
Sbjct: 731 SIEFCGGTHVAKTGDIKDLVIVEESGIAKGIRRIVAVTGHDAHHVQKVANEFEQEIDAAA 790
Query: 808 SF 809
S
Sbjct: 791 SL 792
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG A R ANSQKCIR GGKHNDL GRD
Sbjct: 51 VPHNDPTLLFANAGMNQYKPIFLGTVDPASDFASLKRAANSQKCIRAGGKHNDLEDVGRD 110
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK L DRLY T+
Sbjct: 111 SYHHTFFEMLGNWSFGDYFKKEAIDYSWELLTK-VYGLKEDRLYVTY 156
>gi|317036398|ref|XP_001398230.2| alanyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS 513.88]
Length = 1019
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 284/818 (34%), Positives = 418/818 (51%), Gaps = 88/818 (10%)
Query: 2 NNPNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVF 61
N+P + SK +R +FL YF GHT V SSP+VP+ D ++ F N+GM QFK++F
Sbjct: 63 NDPKLE----WTSKRVRDTFLQYF-KENGHTFVASSPVVPHSDPTLLFTNAGMNQFKSIF 117
Query: 62 LGLTPAPYPRVAN------SQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKR 115
LG T P+ AN SQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K+
Sbjct: 118 LG-TVDPHSDFANLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKK 176
Query: 116 DACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGM 175
DA R + E LTK L RLY TYF G+ + GL D E +D+W +GVP DHI M
Sbjct: 177 DAIRYSWELLTKI-YGLDPRRLYVTYFEGNKEGGLEPDLEAKDLWKAVGVPEDHILPGNM 235
Query: 176 KCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTI 235
K NFWEMG GPCG SEIHYD G ++A VN D +++EIWN VFI + R + ++
Sbjct: 236 KDNFWEMGDQGPCGPCSEIHYDRIGGRNAAHL-VNQDDPNVLEIWNNVFIQYNRETDRSL 294
Query: 236 VPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTD 295
PL ++DTG+GFERLV++LQNK+S YDTD+F P+ +TI V+GA+ Y F + +
Sbjct: 295 RPLPNKHVDTGMGFERLVSVLQNKSSNYDTDVFTPIFQTIRDVTGAREYRGCFGSDDADG 354
Query: 296 LDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKEL 352
+DT+YR+++D+ R + A++D P+ + +R V+R + F V+ G ++
Sbjct: 355 IDTAYRVIADHVRTLMFAISDGAVPNNDGRGYVIRRVLRRGARYARKYFGVEIGNFFSKI 414
Query: 353 SYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIM 412
+ + LGD++PE++ + IL EE F K L + + + E +
Sbjct: 415 VPTVVDQLGDMFPELRRKQPDVMEILDEEEMSFA----------KTLDRGERQFEHY--- 461
Query: 413 EEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF 472
Q A+ ++ G + LYDT+G ++ + +A + L + F
Sbjct: 462 -------------AQQAKAKGADKLHGADVWRLYDTFGFPVDLTRIMAEERGLQIDDREF 508
Query: 473 EQKLNELKE--RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
E+ + KE R + K ++ +D+ DL +D K D DT
Sbjct: 509 EEARSRAKEASRGQKKTSAETVKLDVHDLGKLEAMNDVPKTD---------------DTA 553
Query: 531 LVGIV-IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
G I QV I H+ + D QL G+I D+TN YA GGQ +D G
Sbjct: 554 KFGKGNITAQVKAIYHGKTFHSSTDEVPDGEQL------GIILDRTNFYAEQGGQENDTG 607
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRA 648
+ ++ +E+G++ G ++H G + SF V G T E D R
Sbjct: 608 KIVIDGQSE----LEVGDVQLYAGYVLHTGFMKYGSFSV--GDTVICEYDELRRWPIRNN 661
Query: 649 HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
HT +H+LN ALR VL QK V +++ DFS + +S +A +E+ + I
Sbjct: 662 HTGTHILNFALRTVLGDGVEQKGSLVAAEKLRFDFS-HKSAISDKDLARIEEISTEYIRQ 720
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPDDV-----------ILIDISD-KENVISREP 755
V + + + ++ + + GE YPD V IL ++ D + +S E
Sbjct: 721 NCTVYSQELPLATAREISGVRAVFGETYPDPVRVVSVGVELGEILQNVKDPRWKEVSIEF 780
Query: 756 CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
C GTHV TG I+ V+ G+R I +TG+ +
Sbjct: 781 CGGTHVQKTGDIKDLIVLEEGGIAKGIRRIIAVTGEDA 818
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 74/108 (68%), Gaps = 8/108 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVAN------SQKCIRVGGKHNDLSFAGR 871
+P+ D ++ F N+GM QFK++FLG T P+ AN SQKCIR GGKHNDL G+
Sbjct: 96 VPHSDPTLLFTNAGMNQFKSIFLG-TVDPHSDFANLKSAVNSQKCIRAGGKHNDLDDVGK 154
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
DSYHHTFFEMLGNWSF DY+K+DA R + E LTK L RLY T+
Sbjct: 155 DSYHHTFFEMLGNWSFGDYFKKDAIRYSWELLTK-IYGLDPRRLYVTY 201
>gi|448098085|ref|XP_004198838.1| Piso0_002228 [Millerozyma farinosa CBS 7064]
gi|359380260|emb|CCE82501.1| Piso0_002228 [Millerozyma farinosa CBS 7064]
Length = 960
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 286/842 (33%), Positives = 421/842 (50%), Gaps = 101/842 (11%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
+ +RS+FLD+F N + HT V SS +VP+ D S+ F N+GM Q+K +FLG A
Sbjct: 19 TASKVRSTFLDFFKN-KNHTFVPSSSVVPHNDPSLLFANAGMNQYKPIFLGTVDPGSEFA 77
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
R NSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K+DA A E LT+
Sbjct: 78 TLKRAVNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKDAIAWAWELLTE 137
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
L DRLY TYF G ++ GL D E +++W ++GVP DHI K NFWEMG GP
Sbjct: 138 E-YKLEKDRLYVTYFEGDEKNGLEPDLEAKELWSKVGVPDDHILPGNAKDNFWEMGDQGP 196
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIHYD G ++A + VN D D+IE+WNIVFI + R + ++ PL +IDTG+
Sbjct: 197 CGPCSEIHYDRIGGRNAA-SLVNEDDPDVIEVWNIVFIQYNREADSSLRPLPAKHIDTGM 255
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV+ILQNK+S YDTD+F P+ I +V+G +PY F + ++ +DT+YR+++D++
Sbjct: 256 GFERLVSILQNKSSNYDTDVFTPIFNKIREVTGVRPYTGKFGSEDKDGIDTAYRVIADHA 315
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T A++D P+ + LR ++R G +++ I E D++
Sbjct: 316 RTLTFAISDGGVPNNEGRGYVLRRILRRGARYVRKYMNYPIGSFFQQIISVIIERNSDIF 375
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI +++ IL EE F K L + + EQ+ I+
Sbjct: 376 PEISKYQEELKEILNEEELSFA----------KTLDRGEKLFEQYAII------------ 413
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
++ P T +SG + LYDTYG ++ + +A + E FE+ E +E SK
Sbjct: 414 ---ASKTPEQT-LSGRDVWRLYDTYGFPVDLTRLMAEEAGTKIDEEGFEKARLESREASK 469
Query: 485 AKAAS--------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV- 535
+ + +V + +D K P TDD YKY LD IV
Sbjct: 470 SNTSKSGNQPIKLDVHALSDLDNKQIPKTDDSYKY--------------GLDNVKAKIVE 515
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
I D +D +IDS + E+ G++ DKT YA GGQ D G +
Sbjct: 516 IFDGSSFVD-----------TIDSTEKEY----GILLDKTAFYAEQGGQEYDTGNLVIDG 560
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+ + N + + G ++H G +V + G + R HT +H+L
Sbjct: 561 SAEFN----VTNVQVYGGYVLHTGTMVEGI-LKVGNEVIATYNELRRWPIRNNHTGTHVL 615
Query: 656 NAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
N ALR VL + QK V ++ DFS + + +S + + +E N I +V +
Sbjct: 616 NFALREVLGDSVDQKGSLVAPEKLRFDFS-HKKAVSTEELRKIEDISNHYIKEDKKVFAK 674
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVF 762
+ SE + L + GE YPD V ++ I + ++P C GTHV
Sbjct: 675 DVSLSEARNINGLRAVFGETYPDPVRVVSIGVPVEDLLKDPSNSQWHKYSIEFCGGTHVS 734
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASF-SQILNVGNIPYG 821
T I+ +I G+R I +TG+ + AA F +++ +P+G
Sbjct: 735 KTAEIKYLVIIEESGIAKGIRRIVAVTGNEAYEVQR------IAADFENELKKASQLPFG 788
Query: 822 DD 823
++
Sbjct: 789 EE 790
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D S+ F N+GM Q+K +FLG A R NSQKCIR GGKHNDL GRD
Sbjct: 45 VPHNDPSLLFANAGMNQYKPIFLGTVDPGSEFATLKRAVNSQKCIRAGGKHNDLEDVGRD 104
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K+DA A E LT+ L DRLY T+
Sbjct: 105 SYHHTFFEMLGNWSFGDYFKKDAIAWAWELLTE-EYKLEKDRLYVTY 150
>gi|196003434|ref|XP_002111584.1| hypothetical protein TRIADDRAFT_23916 [Trichoplax adhaerens]
gi|190585483|gb|EDV25551.1| hypothetical protein TRIADDRAFT_23916 [Trichoplax adhaerens]
Length = 959
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 265/834 (31%), Positives = 429/834 (51%), Gaps = 92/834 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L S+ IR F+D+F H V SS VP+ D ++ F N+GM QFK ++LG
Sbjct: 5 LTSEQIRQMFIDFFVEKYNHLFVPSSSTVPHDDPTLLFANAGMNQFKPIYLGTVDPKSEM 64
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A Y RV NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF D++K+++ A E L
Sbjct: 65 ATYRRVVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDFFKKESIDWAWELLV 124
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+P +R+Y TYFGG ++ GL D ET++IWL G+ + + G++ NFWEMG TG
Sbjct: 125 DV-YKMPAERMYVTYFGGDEKSGLQPDYETKNIWLAKGIAPERVLPFGLQDNFWEMGDTG 183
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG +EIHYD G +A VN D +++E+WN+VF R + ++ PL + Y+DTG
Sbjct: 184 PCGPCTEIHYDRIGGRDAAYL-VNMDDPEVLEVWNLVFTQFNREADKSLRPLPRKYVDTG 242
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
G ER+ +++Q S YDTDLF PL + I ++GA+ Y ++ +D +YR+L+D+
Sbjct: 243 AGLERVTSVIQGVMSNYDTDLFKPLFDKIRSLTGAREYRGLLGDADVDGIDMAYRVLADH 302
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R +T+A++D PD+T + LR ++R A+ + + K G + ++ + E LG
Sbjct: 303 ARTLTIAISDGGKPDSTGRGYVLRRILRRAVRYATEKLDAKPGMFAQLVNVAV-EKLGGA 361
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE+ + I+ EE F K L + + E+ + + G++ G
Sbjct: 362 FPEVTKDPQMVIDIINEEEAQF----------LKTLSRGRRMFEREVLKAKDGVLPGF-- 409
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
+A+ LYDTYG ++ +A K L++ + +E+ + +E S
Sbjct: 410 -----------------VAWRLYDTYGFPVDLTHIMAEEKGLSIDMDGYEKAKQDSQELS 452
Query: 484 KAKAASNVPDI---------DLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ K + V D DL DL P+TD KY+Y D N YT + +
Sbjct: 453 RGK-DTGVDDTVALGIHAIKDLEDLA-IPLTDTSPKYNYESDGNGG-YTIHGIAAKI--- 506
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
A+R+ +S + ++ + G+I DK+ YA GGQI D+G ++
Sbjct: 507 -----------SALRYEKSFVN----EVLTGSRCGIILDKSCFYAEQGGQIYDLG--FIV 549
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
N+ E+ + ++ ++ + G ++H G +FKV G T +++VD+ R M HT +H+
Sbjct: 550 NSDDEDTEFKVTDVQIMGGYVLHVGITEGTFKV--GDTVQLQVDSERRRTVMNNHTATHI 607
Query: 655 LNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
LN ALR L Q+ V D DF+ G ++ + A E+ + ++I + QV +
Sbjct: 608 LNFALREQLGEADQRGSLVAPDRLRFDFTAKG-AMTTQQIKATEEIVGNIIEQKQQVFAK 666
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVF 762
++ + L + E YPD V ++ + + + +P C GTH+
Sbjct: 667 DATLAKASAIQGLRQVFAETYPDPVRIVSVGVSVDDLLEDPTGPSGLKTSVEFCGGTHLK 726
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVG 816
N+G +E+ + + G+R I LTG +K V + S S+++ +G
Sbjct: 727 NSGDMEAFVISSEEPIAKGIRRIIALTGSDAKKKVTKLQE-----SLSELMKLG 775
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK ++LG A Y RV NSQKCIR GGKHNDL G+D
Sbjct: 33 VPHDDPTLLFANAGMNQFKPIYLGTVDPKSEMATYRRVVNSQKCIRAGGKHNDLDDVGKD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF D++K+++ A E L +P +R+Y T+
Sbjct: 93 TYHHTFFEMLGNWSFGDFFKKESIDWAWELLVD-VYKMPAERMYVTY 138
>gi|449674132|ref|XP_002160302.2| PREDICTED: alanine--tRNA ligase, cytoplasmic-like [Hydra
magnipapillata]
Length = 997
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 283/830 (34%), Positives = 421/830 (50%), Gaps = 90/830 (10%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
+K +R F+D+F H V SS +P+ D ++ F N+GM QFK++FLG A
Sbjct: 44 AKQVRQDFIDFFVKKYDHIFVPSSSTIPHEDPTLLFANAGMNQFKSLFLGTADPNSDFAK 103
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
RV NSQKC+R GGKHNDL G+D YHHTFFEM+GNWSF D++K++ + E LT
Sbjct: 104 LKRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDFFKKEIIAWSWELLTDV 163
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
L +R Y TYFGG+D G+P DEE + WLELG+P +H+ GMK NFWEMG TGPC
Sbjct: 164 -WGLEKERFYVTYFGGAD--GVPADEEAKQFWLELGLPPNHVLPFGMKENFWEMGETGPC 220
Query: 189 GYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
G SE+HYD + G +S L VN D D++E+WN+VFI R +VPL ++DTGL
Sbjct: 221 GPCSELHYDRIGGRDASNL--VNMDVPDVLEVWNLVFIQFNREVDGQLVPLPNQHVDTGL 278
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ER++++LQNK S YDTD+F P + I + +G KPY ++ +D +YR+++D+
Sbjct: 279 GLERIISVLQNKMSNYDTDVFTPYFDAIHQATGIKPYLGLVGPDDKDGVDMAYRVIADHI 338
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +TVAL+D PD + LR ++R A+ + + K G + L + LG VY
Sbjct: 339 RTLTVALSDGGRPDNVGRGYVLRRILRRAVRFATEKLNCKPG-VFASLVDVVCTSLGSVY 397
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
P I I+ I+ EE F +KT L G + L
Sbjct: 398 PNILKDPQTIKDIINEEESQF--------------LKT--------------LARG-RRL 428
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ A + I+GD+A+ LYDTYG ++ +A + L + +E + +E ++
Sbjct: 429 FNRTADKTTDGIIAGDLAWRLYDTYGFPSDLTILMAEERNLKVDMVGYEVLKAKAQEMAR 488
Query: 485 AKAAS-------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
A+ + +V ID + K F TD+ KY+Y D + Y F + + + +
Sbjct: 489 ARGSEVEDIYSLDVHAIDELKTKGFVQTDESPKYNYEKDEHGN-YVFQPTEAIVTALRVN 547
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
Q +D + N G++ D+T+ YA GGQ+ D G L
Sbjct: 548 KQF----------------VDEVT---NGKCGVLLDRTSFYAEQGGQLFDTGYINLG--- 585
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
E + + ++ G ++H GN+V + KV +T +D R M HT +HLLN
Sbjct: 586 -EEVEFAVNDVQIHGGYVLHVGNLVGTLKVGDKVT--CSIDESRRRSLMNNHTATHLLNF 642
Query: 658 ALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR+VL Q+ V D+ DF+ G LS + V E ++I +V
Sbjct: 643 ALRKVLVDDADQRGSLVAPDKLRFDFTAKG-ALSSEQVKMTEDITREIIKQDQKVFASAS 701
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDIS-DKENVI---------SREPCCGTHVFNTGH 766
+ + L I E+YPD V +I I D +++I S E C GTH+ +TG
Sbjct: 702 SLAVAKNIQGLRAIFDEVYPDPVRVISIGYDLKDLINDPQAGYKTSVEFCGGTHLKSTGD 761
Query: 767 IESCTVIGYKSYNHGVRSIKCLTG-DSSKAAVENGKHLSTAASFSQILNV 815
+ ++ ++ + G+R I LTG D+ KA + ST FS+ + V
Sbjct: 762 VVEFAIVSEEAISKGIRRIVSLTGSDALKAHKRANQLASTLNEFSEYVEV 811
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 69/107 (64%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK++FLG A RV NSQKCIR GGKHNDL G+D
Sbjct: 70 IPHEDPTLLFANAGMNQFKSLFLGTADPNSDFAKLKRVVNSQKCIRAGGKHNDLDDVGKD 129
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEM+GNWSF D++K++ + E LT L +R Y T+
Sbjct: 130 VYHHTFFEMMGNWSFGDFFKKEIIAWSWELLTD-VWGLEKERFYVTY 175
>gi|6176442|gb|AAF05593.1|AF188718_1 alanyl-tRNA synthetase [Drosophila melanogaster]
Length = 966
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 286/852 (33%), Positives = 422/852 (49%), Gaps = 96/852 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +K +R+++LD+F Q H V SS +P D ++ F N+GM QFK +FLG
Sbjct: 4 LTAKEVRNAYLDFF-KEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEM 62
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
+ + RVAN+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A EFLT
Sbjct: 63 SKWVRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLT 122
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ ++LP DRLY TYFGG GL D E + +WL+LG+ +HI MK NFWEMG TG
Sbjct: 123 QR-LALPKDRLYVTYFGGDAASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETG 181
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+H+D G S VN D D++EIWN+VFI + R S ++ L K +ID G
Sbjct: 182 PCGPCSELHFDRIG-GRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCG 240
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++QNK S YDTDLF+PL ++ +PY + +D +YR+L+D+
Sbjct: 241 MGFERLVSVIQNKRSNYDTDLFVPLSMPSKRALVPQPYQGRVGADDVDGIDMAYRVLADH 300
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+ALAD PD T + LR ++R A+ + + K G L + ++LGD
Sbjct: 301 ARTITIALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPG-FFATLVNTVVDLLGDA 359
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I I+ EE F +KT L G
Sbjct: 360 FPEVKKDPQHIIDIINEEELQF--------------LKT--------------LTRGRNL 391
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + + + + T I GD+A+ LYDTYG ++ Q +A K L + + +E + S
Sbjct: 392 LNRTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLKIDMDGYEAAKHNSYVLS 451
Query: 484 KAKAASNVPDIDL-------MDLKHFPVTDD--KYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ K AS + +I+L + + P T+D KYKY+ D Y + ++ +V +
Sbjct: 452 QGKGASKIEEINLDVHAISQLQEQGVPPTNDTFKYKYEAVSDERDSAYNYGVCNSKIVAL 511
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+Q + SG G++ DKTN YA +GGQI D G L
Sbjct: 512 RFENQF-------VNEITSGQK-----------AGIVLDKTNFYAESGGQIYDQGA--LV 551
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E + + + + G I+H G V + KV L + +D R M+ H+ +H
Sbjct: 552 KVNDEANEFLVDRVYNRGGYILHIGVVEGTLKVGDEL--ELHIDVERRWLTMKNHSATHA 609
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN L +VL T QK V ++ DF+ + +++ V +
Sbjct: 610 LNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKA-AMPSSRCPRRSSLTKEMVYKNVPIYA 668
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
+ + + + L + E+YPD V +I S+ S E C GTH+
Sbjct: 669 KESKLALAKKIRGLRSVFDEVYPDPVRVISFGVPVDELEQNPDSEAGEQTSVEFCGGTHL 728
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQIL-----NVG 816
+GHI + ++ G+R I LTG E K L + +F Q + +
Sbjct: 729 RRSGHIMDFVISSEEAIAKGIRRIVALTGP------EALKALKKSEAFEQEIVRLKATID 782
Query: 817 NIPYGDDSIAFV 828
N G DS + V
Sbjct: 783 NDKSGKDSKSHV 794
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 76/107 (71%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG + + RVAN+QKCIR GGKHNDL G+D
Sbjct: 31 IPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKWVRVANTQKCIRAGGKHNDLDDVGKD 90
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A EFLT+ ++LP DRLY T+
Sbjct: 91 VYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTQ-RLALPKDRLYVTY 136
>gi|354542986|emb|CCE39704.1| hypothetical protein CPAR2_601240 [Candida parapsilosis]
Length = 961
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 279/813 (34%), Positives = 409/813 (50%), Gaps = 78/813 (9%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLT 65
I++ + + +RS+FLDYF + + HT V SS +VP+ D ++ F N+GM Q+K +FLG
Sbjct: 7 INTTEKWTAPKVRSTFLDYFKDKRQHTYVPSSSVVPHNDPTLLFANAGMNQYKPIFLGTV 66
Query: 66 P-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
A R ANSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A
Sbjct: 67 DPASDFAKLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIAW 126
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ E LT L DRLY TYFGG ++ GL D E + WL++GV DHI K NFW
Sbjct: 127 SWELLTDV-YGLEKDRLYVTYFGGDEKQGLEADLEAKKFWLDVGVAEDHILPGDAKDNFW 185
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D +++E+WN+VFI + R + ++ PL
Sbjct: 186 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNMDDPNVLEVWNVVFIQYNREADGSLRPLPN 244
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV+ILQNK+S YDTD+FLP+ + I +++G +PY F ++ +DT+Y
Sbjct: 245 KHIDTGMGFERLVSILQNKSSNYDTDVFLPIFDKIREITGVRPYTGKFGADDKDGIDTAY 304
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+++D+ R +T A+ D P+ + LR V+R G +L +
Sbjct: 305 RVIADHVRTLTFAICDGGVPNNEGRGYVLRRVLRRGSRYVRKYMNYPIGSFFPQLVDIVI 364
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ +++PEI+ ++ IL EE F K L + + EQ+ I+
Sbjct: 365 QQNKEIFPEIESGSQDLKEILNEEELSFA----------KTLDRGEKLFEQYAII----- 409
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
++ P T +SG + LYDTYG ++ + +A L + + FE
Sbjct: 410 ----------ASKTPEQT-LSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEKGFEVAKE 458
Query: 478 ELKERSKAKAASNVPDIDLMDLKHFPVTDDKY-KYDYHYDTNSKRYTFPCLDTNLVGIVI 536
E +E SK A N + +D+ + K K D + +Y + ++ I
Sbjct: 459 ESREASKGGANKNASSLIKLDVHALSELEGKVAKTD-----DDAKYGLDNIKAKVLAIYD 513
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQL-EHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
G + +DSIQ E G++ DKT YA GGQ D G +
Sbjct: 514 GSKF----------------VDSIQQNEEGQQYGILLDKTPFYAEQGGQEYDTGKLVIDG 557
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T+ N + + G ++H G V+ K++ G D R HT +H+L
Sbjct: 558 KTEFN----VENVQVYAGYVLHTGFVLEG-KLSVGDDVIAAYDELRRWPIRNNHTGTHVL 612
Query: 656 NAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
N ALR VL QK V ++ DFS + + L+ + VE N I + QV +
Sbjct: 613 NYALREVLGDDVDQKGSLVAKEKLRFDFS-HKQALTPKELEKVEGISNQYIRDNKQVYYK 671
Query: 715 HMRASELPFLTHLTVIPGEIYPD-----------DVILIDISDKE-NVISREPCCGTHVF 762
+ +E + L + GE YPD D +L D +++E IS E C GTHV
Sbjct: 672 DVPLTEAKAICGLRAVFGETYPDPVRVVSIGVPVDELLKDPTNEEWRSISIEFCGGTHVA 731
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKA 795
T I+ +I G+R I +TG + A
Sbjct: 732 KTSEIKDLVIIEESGIAKGIRRIVAVTGHDAHA 764
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG A R ANSQKCIR GGKHNDL GRD
Sbjct: 41 VPHNDPTLLFANAGMNQYKPIFLGTVDPASDFAKLKRAANSQKCIRAGGKHNDLEDVGRD 100
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LT L DRLY T+
Sbjct: 101 SYHHTFFEMLGNWSFGDYFKKEAIAWSWELLTD-VYGLEKDRLYVTY 146
>gi|341876624|gb|EGT32559.1| hypothetical protein CAEBREN_22812 [Caenorhabditis brenneri]
Length = 983
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 279/829 (33%), Positives = 406/829 (48%), Gaps = 75/829 (9%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP---- 66
+L + +RS+F+++F + HT V SS ++P+ D ++ F N+GM QFK +FLG+
Sbjct: 3 QLTASEVRSTFINFFREKKEHTYVHSSSVIPHDDPTLLFANAGMNQFKPLFLGIADPNSD 62
Query: 67 -APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
A R N+QKC+R GGKHNDL G+D YHHT+FEMLGNWSF DY+K++ A E L
Sbjct: 63 LAKLKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGNWSFGDYFKKEIITWAWELL 122
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
T +P +RLY + FGG + G+P D E RDIW +GVP + I GMK NFWEMG
Sbjct: 123 TTV-YGIPAERLYVSVFGGDEANGVPADTEARDIWRSVGVPDERILNFGMKDNFWEMGDV 181
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG SEIHYD G A VNAD ++EIWN+VFI R + PL +ID
Sbjct: 182 GPCGPCSEIHYDRIGN-RDASHLVNADDPMVVEIWNLVFIQFNREEGGALKPLPAKHIDC 240
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
GLG ERL+ ++Q+KTS YDTD+F P+ E I K SG + Y ++ +D +YR++ D
Sbjct: 241 GLGLERLIAVMQDKTSNYDTDIFQPIFEAIHKGSGVRKYTGLIGDEDKDGVDMAYRVVGD 300
Query: 306 YSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVK----QGKLVKELSYNIAEILG 361
+ R +T+AL+D PD + R V +L + + Q L + ILG
Sbjct: 301 HIRTLTIALSDGGRPDNSG--RGYVLRRILRRGIRYATEKLNAQPGFFASLVPVVISILG 358
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
+ +PE+ + I+ +E + F +KT L G
Sbjct: 359 ETFPELSRDPETVMDIINDEEKQF--------------LKT--------------LSRGR 390
Query: 422 KYLTKQLARDPSITE-ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
K + P+ T+ GD+A+ LYDTYG ++ Q +A K L++ AF++ +
Sbjct: 391 VLFQKAVDSLPAGTKTFPGDIAWRLYDTYGFPADLTQLMAEEKGLSVDISAFDEARKKAV 450
Query: 481 ERSKAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNSKRYT----FPCLDT 529
E S A A +DL + K P TDD KY Y + F
Sbjct: 451 ETSSAGAGKFRDTLDLDVHALAELQQKGVPTTDDTPKYAYSFTGEGAEAVYSKFFHVSKI 510
Query: 530 NLVGIVIGDQVFCIDK-HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI 588
+ I + CI K AIR R G +D QL L+ D+TN YA GGQI D+
Sbjct: 511 GSITFSILEFEPCIGKILAIR--RDGKFVD--QLVAGEEGALLLDRTNFYAEQGGQIYDV 566
Query: 589 GVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA 648
GV LT E+ + + G IV G+ SF V + R + D + + M+
Sbjct: 567 GV--LTKVNDESNEFNVNNCQVRGGYIVLVGSAEGSFAVGDEVNQRFDEDRKQLI--MKN 622
Query: 649 HTTSHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
HT +H+LN ALR++L+ + QK V D DF+ ++ D V E+Y +I +
Sbjct: 623 HTGTHVLNYALRKILSDSDQKGSLVAPDRMRFDFTNKA-AMTPDQVKQAEEYAQQLIDTK 681
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------C 756
QV ++ ++ + L + E YPD V ++ + + + P C
Sbjct: 682 GQVYAKNSPLADAKRINGLRAMFDETYPDPVRVVAVGTPVEQLLQNPEAEEGQNTTVEFC 741
Query: 757 CGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST 805
GTH+ N HI + ++ G+R I LTG ++ A+ L
Sbjct: 742 GGTHLQNVSHIGRIVISSEEAIAKGIRRIVALTGPEAERAIARADRLEA 790
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 69/106 (65%), Gaps = 6/106 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG+ A R N+QKCIR GGKHNDL G+D
Sbjct: 32 IPHDDPTLLFANAGMNQFKPLFLGIADPNSDLAKLKRAVNTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
YHHT+FEMLGNWSF DY+K++ A E LT +P +RLY +
Sbjct: 92 VYHHTYFEMLGNWSFGDYFKKEIITWAWELLT-TVYGIPAERLYVS 136
>gi|50545890|ref|XP_500483.1| YALI0B04180p [Yarrowia lipolytica]
gi|49646349|emb|CAG82710.1| YALI0B04180p [Yarrowia lipolytica CLIB122]
Length = 960
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 289/828 (34%), Positives = 406/828 (49%), Gaps = 97/828 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----R 71
+R +FLDYF + H+ V SS ++PY D ++ F N+GM Q+K +FLG P R
Sbjct: 13 VRKTFLDYFGEKRAHSFVPSSSVIPYDDPTLLFANAGMNQYKPIFLGTCDPSSPLSKLNR 72
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
ANSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K +AC A E LT+
Sbjct: 73 AANSQKCIRAGGKHNDLDDVGRDSYHHTFFEMLGNWSFGDYFKAEACAWAWELLTQV-YG 131
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY +YFGG D+ GL D E + IW++LGV DHI NFWEMG GPCG
Sbjct: 132 LDADRLYVSYFGGDDKLGLQPDLEAKQIWMDLGVAEDHILPGDSADNFWEMGDQGPCGPC 191
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIHYD G +A VN D +++EIWNIVFI + R + ++ PL +IDTG+GFER
Sbjct: 192 SEIHYDRIGGGRNARDLVNMDDPNVLEIWNIVFIQYNREADKSLKPLPAKHIDTGMGFER 251
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV++LQ+K+S YDTD+F P+ I++++GA+ Y F + +DT+YR+++D+ R +T
Sbjct: 252 LVSVLQDKSSNYDTDVFTPIFAKIQELTGARDYAGKFGAEDADGIDTAYRVVADHVRTLT 311
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
ALAD P+ + LR ++R F V G +L+ + E + +++PE+
Sbjct: 312 FALADGGVPNNDGRGYVLRRILRRGARFVRKKFDVPIGSFFSQLAPTLIEQVNEIFPELS 371
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
I IL +E + F + L + + EQ+
Sbjct: 372 KRTEDIFEILNDEEQSFS----------RTLDRGEKLFEQY----------------AAD 405
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA--K 486
A+ S T ++G + LYDTYG ++ + +A L + AF++ E E SK K
Sbjct: 406 AKANSKTVLAGKDVWRLYDTYGFPVDLTRIMAEEAGLDIDEAAFDKAKQESLEASKGGKK 465
Query: 487 AASNVP--DIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
A V +D+ L P TDD+ K+ T S D +V I G
Sbjct: 466 TAGGVQLVKLDVHALAELEKNDAVPKTDDQAKF-----TESN-----LSDAKVVAIYNGT 515
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
+DS+ E VGL+ DKT +YA +GGQ D G + T+
Sbjct: 516 GF----------------VDSVD-ESAGQVGLLLDKTCMYAESGGQEYDTGKIVIDGQTE 558
Query: 599 ENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
++ + G ++H GN S K+ G V D R HT +H+LN
Sbjct: 559 ----FDVNNVQVYAGYVLHTGNFNYGSLKI--GDVVNVGFDTARRTPLKNNHTGTHVLNY 612
Query: 658 ALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
AL+ L T QK V S++ DFS + L+ VA VE N I + V + +
Sbjct: 613 ALKETLGDTIDQKGSLVASEKLRFDFS-HKAGLTPAEVAKVEDISNAYITKNLAVYAKSV 671
Query: 717 RASELPFLTHLTVIPGEIYPD------------DVILIDISDKENVISREPCCGTHVFNT 764
+ + + + GE YPD D+I K S E C GTHV T
Sbjct: 672 DLTTAKKINGVRAVFGETYPDPVRVVSVGVPVEDLIANPDDAKWAEYSVEFCGGTHVGKT 731
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTG----DSSKAAVENGKHLSTAAS 808
G I+ +I G+R I +TG D K A E + L A+
Sbjct: 732 GEIKHLVIIEESGIAKGIRRIVAVTGKEAADVQKLAAEFDERLDKLAA 779
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM Q+K +FLG P R ANSQKCIR GGKHNDL GRD
Sbjct: 36 IPYDDPTLLFANAGMNQYKPIFLGTCDPSSPLSKLNRAANSQKCIRAGGKHNDLDDVGRD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K +AC A E LT+ L DRLY ++
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKAEACAWAWELLTQ-VYGLDADRLYVSY 141
>gi|320164762|gb|EFW41661.1| alanyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
Length = 954
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 292/840 (34%), Positives = 421/840 (50%), Gaps = 93/840 (11%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
+ ++R F+D+F ++GH V SS ++P+ D ++ F N+GM QFK FLG A
Sbjct: 10 ASAVRQQFVDFFV-SKGHEFVPSSSVIPHDDPTLLFANAGMNQFKPAFLGTADPNSRMAK 68
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
Y R ANSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++A A E LT
Sbjct: 69 YRRTANSQKCIRAGGKHNDLEDVGKDVYHHTFFEMLGNWSFGDYFKKEAISWAWELLT-- 126
Query: 129 PVSLPLD--RLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
V LD RLY TYFGG+++ GL D E RDIWL +G+P + + GMK NFWEMG TG
Sbjct: 127 -VVYKLDPNRLYVTYFGGNEKAGLEADLEARDIWLSVGLPAERVLPYGMKENFWEMGETG 185
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIH+D G A A VNAD D++EIWN+VFI R ++ L + ++DTG
Sbjct: 186 PCGPCSEIHFDRIGGGRDAAALVNADDPDVLEIWNLVFIQFNREVDQSLRKLPRCHVDTG 245
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ER+V++LQNK S YDTD+F+P I+ +G + Y + LD +YR+++D+
Sbjct: 246 MGLERIVSVLQNKRSNYDTDVFVPYFTAIQAATGIRAYTGKVGADDTDGLDMAYRVVADH 305
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R +T+ALAD P T + LR V+R A+ + K G L + LG
Sbjct: 306 IRTLTIALADGGAPGPTGRDYVLRRVLRRAVRYCAEKLGAKPG-FFASLVDVVGTSLGGF 364
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE+ S I+ I+ EE F K L + + E+ + G++ G+
Sbjct: 365 FPELVRSPQDIKDIINEEEAQFR----------KTLDRGKRLFERAAAASKNGVIEGL-- 412
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
+A+ LYDTYG ++ + +AA KLT+ F+ + KE S
Sbjct: 413 -----------------VAWRLYDTYGFPLDLTELMAAELKLTIDKPGFKIAEADAKEAS 455
Query: 484 KAKAAS-------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
K K +V +I + K P TDD K++Y + + +YTF ++V I +
Sbjct: 456 KGKVDEAEETVVLDVHNISALKDKGVPATDDSPKFNYRSEND--KYTFESAVGSIVAIAL 513
Query: 537 GDQ-VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
G + V +D +++ A+ VG++ DKTN YA GGQI D G A T
Sbjct: 514 GKELVSTVDFESLKGAK---------------VGIVLDKTNFYAEQGGQIFDTGFA--TR 556
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E + I + ++H G + S + LT + +D RL M HTT+H+
Sbjct: 557 VDNEASEFAIESVKVYGPYVLHVGRLQGGSLSIGDKLT--LSIDDIRRLPIMANHTTTHM 614
Query: 655 LNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN ALR VL + QK V D DFS + + +S + + +EK +ND+I V R
Sbjct: 615 LNFALREVLGNSVDQKGSLVRPDNFRFDFS-HPKAVSTEELRKIEKIVNDIIEKNETVYR 673
Query: 714 RHMRASELPFLTHLTVIPGEIYPD-----------DVILID-ISDKENVISREPCCGTHV 761
+ L + E+YPD + +L D S S E C GTH+
Sbjct: 674 VPTALHLAKEVAGLRAVFDEVYPDPVRVVSVGVPVEKLLADPASASWKGYSIEFCGGTHI 733
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIPYG 821
T + + G+R I +TG + A + L +++ V IP G
Sbjct: 734 DRTRDARRFAIFREEGIAKGIRRISGITGKEAIEAYKTADKLE-----AKVKQVSEIPIG 788
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 71/109 (65%), Gaps = 10/109 (9%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK FLG A Y R ANSQKCIR GGKHNDL G+D
Sbjct: 35 IPHDDPTLLFANAGMNQFKPAFLGTADPNSRMAKYRRTANSQKCIRAGGKHNDLEDVGKD 94
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLD--RLYFTF 919
YHHTFFEMLGNWSF DY+K++A A E LT V LD RLY T+
Sbjct: 95 VYHHTFFEMLGNWSFGDYFKKEAISWAWELLT---VVYKLDPNRLYVTY 140
>gi|212541448|ref|XP_002150879.1| alanyl-tRNA synthetase, putative [Talaromyces marneffei ATCC 18224]
gi|210068178|gb|EEA22270.1| alanyl-tRNA synthetase, putative [Talaromyces marneffei ATCC 18224]
Length = 1000
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 276/817 (33%), Positives = 424/817 (51%), Gaps = 94/817 (11%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP---- 66
+ ++ +R+ F+DYF +GHT V SS +VP D ++ F N+GM Q+K++FLG
Sbjct: 49 QWTAERVRNEFIDYF-KERGHTFVPSSSVVPVSDPTLLFANAGMNQYKSIFLGTVDPQSD 107
Query: 67 -APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
A R NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K +A + E L
Sbjct: 108 FAHLKRAVNSQKCIRAGGKHNDLDDVGKDNYHHTFFEMLGNWSFGDYFKNEAITYSWELL 167
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
TK L RLY TYF G Q GL D E +DIW ++GVP DHI MK NFWEMG
Sbjct: 168 TKV-FGLDPSRLYVTYFEGDAQGGLEPDLEAKDIWRKVGVPEDHILPGNMKDNFWEMGDQ 226
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG SE+HYD G ++A + VN D +++EIWN VFI + R + ++ PL ++DT
Sbjct: 227 GPCGPCSEVHYDRIGGRNAA-SLVNQDDPNVLEIWNNVFIQYNREADRSLRPLPNKHVDT 285
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV++LQ+K+S YDTD+F+PL TI++++GA+ Y F + +DT+YR+++D
Sbjct: 286 GMGFERLVSVLQDKSSNYDTDVFMPLFRTIQEITGAREYQGRFGAEDADGVDTAYRVVAD 345
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R +T A++D +P+ + +R V+R + F V+ G ++ + +G
Sbjct: 346 HVRTLTFAISDGAYPNNEGRGYVIRRVLRRGARYARKYFNVEIGSFFSKIVPTLVNQMGG 405
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
++PEI++ +++ L EE F K L + + + E +
Sbjct: 406 MFPEIKEKQDEVMEALNEEEVSFS----------KTLDRGEKQFENY------------- 442
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
Q A+ + ++ G + LYDT+G ++ Q +A + L++ FE+ + KE
Sbjct: 443 ---AQQAKSKGLNKLHGADVWRLYDTFGFPVDLTQIMAEERGLSIDEAEFEEARLKAKEA 499
Query: 483 SKA--KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
SK KAA+ +D+ DL P TDD K+D P +++ +
Sbjct: 500 SKGQKKAAAETVKLDVHDLGKLDNMHEVPKTDDSSKFDS-----------PKIESVV--- 545
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
AI +++S + + +G+I D+TN YA GGQ +D G Y+
Sbjct: 546 -----------KAIYYSKSFIQT-TADVPEGEQIGVILDRTNFYAEQGGQENDTGAIYI- 592
Query: 595 NTTQENGK--VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
NGK +E+G++ S G ++H G + + G + E D R R HT +
Sbjct: 593 -----NGKAELEVGDVQSYGGYVLHTG-FIKYGSLAVGDSVTCEFDDRRRQPIRNNHTGT 646
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
H+LN ALR VL QK V +++ DFS + +S + +E+ + I V
Sbjct: 647 HILNFALREVLGDGINQKGSLVAAEKLRFDFS-HKAGVSDKELDQIERKSTEYIRQNCGV 705
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISD-KENVISREPCCGT 759
+ + + ++ + + GE YPD + IL D+ D + N IS E C GT
Sbjct: 706 YSKEVPLATAREISGVRAVFGETYPDPVRVVSVGVEVEEILKDVKDPRWNDISIEFCGGT 765
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
HV +G I ++ G+R I +TGD + A
Sbjct: 766 HVSKSGEIRELVILEESGIAKGIRRIIAVTGDEALQA 802
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 67/103 (65%), Gaps = 6/103 (5%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDSYHH 876
D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D+YHH
Sbjct: 81 DPTLLFANAGMNQYKSIFLGTVDPQSDFAHLKRAVNSQKCIRAGGKHNDLDDVGKDNYHH 140
Query: 877 TFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
TFFEMLGNWSF DY+K +A + E LTK L RLY T+
Sbjct: 141 TFFEMLGNWSFGDYFKNEAITYSWELLTK-VFGLDPSRLYVTY 182
>gi|49119610|gb|AAH73734.1| LOC443692 protein, partial [Xenopus laevis]
Length = 1005
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 280/816 (34%), Positives = 410/816 (50%), Gaps = 73/816 (8%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
+ +IR +FL YF GH V SS + P GD S+ FVN+GM QFK +FLG A
Sbjct: 54 AAAIRRAFLRYFQEKHGHRHVPSSSVRPRGDPSLLFVNAGMNQFKPIFLGTADPRSDMAQ 113
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
Y RV NSQKCVR GGKHNDL GRD YHHTFFEMLGNWSF DY+K +AC MA + LT+
Sbjct: 114 YRRVVNSQKCVRAGGKHNDLEDVGRDVYHHTFFEMLGNWSFGDYFKEEACSMAWQLLTQG 173
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
+P DRLY TYFGG GL D+ET++IWL LGVP + G+K NFWEMG TGPC
Sbjct: 174 -YGIPEDRLYVTYFGGEPTLGLSADQETQEIWLSLGVPPARLLPFGLKENFWEMGETGPC 232
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G +EIHYD G ++A + VN D D++EIWN+VF+ + R S ++ L + ++DTG+G
Sbjct: 233 GPCTEIHYDHVGGRNAA-SLVNQDSPDVVEIWNLVFMQYNRESDRSLRLLPQQHVDTGMG 291
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
ERLVT+LQ K S YDTDLF P+LE I K S A Y + D +YR+++D+ R
Sbjct: 292 LERLVTVLQGKRSNYDTDLFSPILEAIMKGSRAPQYQGLMGKEDTEHTDMAYRVVADHIR 351
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
+ V +AD ++P + LR ++R A+ S ++ + + L ++ +LG+ +P
Sbjct: 352 TLCVCIADGVYPGMSGAELVLRRILRRAVRFSSEILRAPP-LFLSSLVPSVVHVLGEAFP 410
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ ++I IL E F + + ++ Q E + F + GV +
Sbjct: 411 ELEREKSQIMNILNENEEAFLISLQQGRRIIDRTLQQQEEPQTFPV--------GVAW-- 460
Query: 426 KQLARDPSITEISGDMAFTLYDTYGL---SKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+ ++ F L D GL + I + AA LT+ EA + N+ +
Sbjct: 461 ----------SLHRNLGFPL-DLIGLMLEERGISLDKAAMDHLTV-EEAERKMRNQQADE 508
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
++ +V + + + P T+D KY+Y + K PC T L+
Sbjct: 509 AQTGLELDVHSMAELQRRGVPCTNDSPKYNYTLAADGKYVFGPCRATVLM---------L 559
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
H++ + ID Q G+I D+T YA GGQ D G Y Q+
Sbjct: 560 YKDHSLH-----SEIDKGQR-----CGVILDQTCFYAEQGGQSCDQG--YFVRKDQQEAL 607
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
+ + G ++H +V L + +D RL CM+ HT +HLLN L +V
Sbjct: 608 FPVESVQVAGGYMLHEVTTPEVLRVGDQLV--LYLDEAHRLACMQKHTATHLLNYTLHQV 665
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR-------- 713
L T Q+ V ++ D SV + V+ + VE+ + D+I+ ++
Sbjct: 666 LGENTVQRGSHVTAERLRFDVSVTA-PVHVEQLQEVEQVLQDLISQDEEIHTALVPLTAA 724
Query: 714 ---RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESC 770
R +R + + + V+ I P DV L S S E CCGTH+ TG I+
Sbjct: 725 KCVRGLRTVDEAYPNPVRVVSVGI-PVDVALKPGSQAALQTSVELCCGTHLLTTGAIQDV 783
Query: 771 TVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTA 806
++ + G+ + +TG+ +K A E G L A
Sbjct: 784 VIVSERPLAKGITRLIAITGEEAKQARETGHELVRA 819
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 74/106 (69%), Gaps = 6/106 (5%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A Y RV NSQKC+R GGKHNDL GRD
Sbjct: 81 PRGDPSLLFVNAGMNQFKPIFLGTADPRSDMAQYRRVVNSQKCVRAGGKHNDLEDVGRDV 140
Query: 874 YHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K +AC MA + LT+ +P DRLY T+
Sbjct: 141 YHHTFFEMLGNWSFGDYFKEEACSMAWQLLTQ-GYGIPEDRLYVTY 185
>gi|378732975|gb|EHY59434.1| alanyl-tRNA synthetase [Exophiala dermatitidis NIH/UT8656]
Length = 1107
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 287/853 (33%), Positives = 421/853 (49%), Gaps = 98/853 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLT-----PAPYPR 71
+R +FL YF +GHT V+SSP+VP D ++ F N+GM QFK +FLG R
Sbjct: 159 VRETFLKYF-EERGHTFVRSSPVVPLSDPTLLFTNAGMNQFKPIFLGTVDPTSKEGQLKR 217
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + E LTK
Sbjct: 218 AVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIGYSWELLTKV-FG 276
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYF G++ GL D E +++W +GVP DHI MK NFWEMG GPCG
Sbjct: 277 LDPDRLYVTYFEGNEAGGLEPDLEAKELWKSVGVPEDHILPGNMKDNFWEMGDQGPCGPC 336
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SE+HYD G +A + VN D +++EIWN VFI + R ++ PL ++DTG+GFER
Sbjct: 337 SEVHYDRIGGGRNAASLVNQDDPNVLEIWNNVFIQYNREPDKSLRPLPNKHVDTGMGFER 396
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV++LQ+K S YDTD+F PL + I++V+GA+PY F ++ +DT+YR+++D+ RM+T
Sbjct: 397 LVSVLQDKLSNYDTDVFTPLFDRIQEVTGARPYAGKFGDEDKDGVDTAYRVVADHVRMLT 456
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A++D P+ + +R V+R + V+ G + + +GD++ EI
Sbjct: 457 FAISDGGIPNNEGRGYVVRRVLRRGARYARKYLNVEIGNFFSRVVPTLVAQMGDMFKEIV 516
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELE-QFNIMEEPGLVLGVKYLTKQ 427
+++ IL EE F KT E QF + + G+K L
Sbjct: 517 AKEEEVKEILDEEELSF--------------AKTLDRGERQFEVYAQKSQAQGLKKL--- 559
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA-- 485
G + LYDT+G ++ + +A + L++ FE+ + +E SK
Sbjct: 560 ----------HGADVWRLYDTFGFPVDLTRLMAEERGLSIDDNEFEEARLKAREASKGEK 609
Query: 486 KAASNVPDIDLMDLKHFP------VTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
KAASN+ +D+ DL TDD K+ N+ G +
Sbjct: 610 KAASNLLKLDVHDLGELEKMPGVTKTDDSAKFGR---------------DNINGKI---- 650
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
AI HA+ D+ + VGLI DKTN YA GGQ D G + +
Sbjct: 651 ------QAIYHAKKFHE-DTRNVPEGEQVGLILDKTNFYAEQGGQEYDTGRIVIDGQAE- 702
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + G ++H G + T G + E D R HT +H+LN AL
Sbjct: 703 ---LEVENVQVYAGYVLHTGYMKYGHFST-GDVAICEYDELRRWPIRNNHTGTHILNFAL 758
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R VL QK V ++ DFS + +S +A +E + I V + +
Sbjct: 759 REVLGDGIDQKGSLVAPEKLRFDFS-HKAPVSDADLAKIEDISTEYIRQNCPVYGKDVPL 817
Query: 719 SELPFLTHLTVIPGEIYPD-----------DVILIDISDKE-NVISREPCCGTHVFNTGH 766
+ +T + + GE YPD D IL ++ D+ +S E C GTHV +TG
Sbjct: 818 AIAREITGVRAVFGETYPDPVRVVSVGVEVDDILKNVKDERWRTVSIEFCGGTHVRSTGD 877
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQIL-NVGNIPYGDDSI 825
I+ ++ G+R I +TG+ + A F Q L + N+P+G +
Sbjct: 878 IKDLVILEESGIAKGIRRIIAVTGEDAHTVQR------VADEFEQKLTKLENMPFGPEKE 931
Query: 826 AFVNSGMCQFKNV 838
V + + N+
Sbjct: 932 QEVKATQSELDNL 944
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 69/107 (64%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLT-----PAPYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK +FLG R NSQKCIR GGKHNDL G+D
Sbjct: 181 VPLSDPTLLFTNAGMNQFKPIFLGTVDPTSKEGQLKRAVNSQKCIRAGGKHNDLDDVGKD 240
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK L DRLY T+
Sbjct: 241 SYHHTFFEMLGNWSFGDYFKKEAIGYSWELLTK-VFGLDPDRLYVTY 286
>gi|301102849|ref|XP_002900511.1| alanyl-tRNA synthetase, mitochondrial precursor [Phytophthora
infestans T30-4]
gi|262101774|gb|EEY59826.1| alanyl-tRNA synthetase, mitochondrial precursor [Phytophthora
infestans T30-4]
Length = 980
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 280/822 (34%), Positives = 410/822 (49%), Gaps = 95/822 (11%)
Query: 17 IRSSFLDYFCNTQG--HTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP---- 70
IR +F +YF N + HT KS P+VP D ++ F+N+GM Q+K +FLG +P
Sbjct: 31 IRKTFFEYFQNQKELPHTFYKSCPVVPLDDPTLLFINAGMNQYKPIFLGQVDPSHPMAKL 90
Query: 71 -RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP 129
R NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF +Y+K++A ++ LT+
Sbjct: 91 VRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGNYFKKEAVHLSFTLLTEV- 149
Query: 130 VSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
+ DRLY TYFGG ++ GLP DEETR+IWL +P + + G K NFWEMG GPCG
Sbjct: 150 FGIDKDRLYATYFGGDEKQGLPSDEETREIWLNY-LPTERVLPFGCKDNFWEMGDVGPCG 208
Query: 190 YSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
+EIHYD G A VNADR D+IEIWN VFI R +VPL ++DTG+GF
Sbjct: 209 PCTEIHYDRIGN-RDASELVNADRPDVIEIWNNVFIQFNREQDGKLVPLPHKHVDTGMGF 267
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERL +ILQ K S YDTD+F PL I+K + A PY + D +YR+++D+ R
Sbjct: 268 ERLASILQGKDSNYDTDVFTPLFAAIQKSTKAAPYTGKLGEEDPDKKDMAYRVVADHVRT 327
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
+T A+ D P + LR ++R A+ + G L EL + +LG+ +PE
Sbjct: 328 LTFAITDGAVPSNDGRGYVLRRILRRAVRYGQQFLNAPSGFLT-ELVPVVVNMLGEAFPE 386
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ +++ I+ +E + F ++ +K + + I E LV
Sbjct: 387 LVQKQKEVEEIILDEEKSFGRTLNKGIERFKKIAQ--------GIREANKLV-------- 430
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK-- 484
+ G+ AF LYD+ G ++ + +A + +T+ + +E+ + ERSK
Sbjct: 431 ----------VPGEDAFFLYDSMGFPIDLTEIMAEEEGMTVDIKGYEECMRLQSERSKMD 480
Query: 485 -AKAASN--------VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
K SN + + KH TDD KY+++ T++K +V I
Sbjct: 481 RKKGGSNGARPLVLEARETSTLAGKHISATDDMAKYEWNVKTSAK----------VVAIF 530
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
+ S +D ++ VG+I DKT+ Y+ AGGQI D GV
Sbjct: 531 TTTE------------SSSDFVDEVKAGDFERVGVILDKTSFYSQAGGQIYDTGV----- 573
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVS-SFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
T N K+++ + S G ++H G++ + S KV G + EVD R HT +H
Sbjct: 574 LTASNLKLDVDSVESYAGYVMHMGSIATGSIKV--GDSVACEVDYARRAKIAPNHTMTHA 631
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN ALR+VL T Q+ V DF+ + L +A VE +D+I Q++V
Sbjct: 632 LNFALRKVLGTVVDQRGSLVDESRLRFDFT-NNKALKPAQLAEVEAICDDLIKQQLEVYT 690
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISD------------KENVISREPCCGTHV 761
++ +E + L + GE YPD V ++ I K + S E C GTH+
Sbjct: 691 QNSAQAEAKRIQGLRAVFGETYPDFVRVVSIGQPIAPMLEDPEKSKWSNFSVEFCGGTHL 750
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
NT + + + G+R + T D + A E G L
Sbjct: 751 KNTKEAKRFVLYEEGAIAKGIRRVSAYTCDLAVEAEERGAKL 792
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F+N+GM Q+K +FLG +P R NSQKCIR GGKHNDL G+D
Sbjct: 56 VPLDDPTLLFINAGMNQYKPIFLGQVDPSHPMAKLVRACNSQKCIRAGGKHNDLDDVGKD 115
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF +Y+K++A ++ LT+ + DRLY T+
Sbjct: 116 VYHHTFFEMLGNWSFGNYFKKEAVHLSFTLLTE-VFGIDKDRLYATY 161
>gi|52630311|ref|NP_941010.2| alanine--tRNA ligase, mitochondrial precursor [Mus musculus]
gi|115502845|sp|Q14CH7.1|SYAM_MOUSE RecName: Full=Alanine--tRNA ligase, mitochondrial; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS; Flags:
Precursor
gi|109730201|gb|AAI13780.1| Alanyl-tRNA synthetase 2, mitochondrial (putative) [Mus musculus]
gi|109730687|gb|AAI13173.1| Alanyl-tRNA synthetase 2, mitochondrial (putative) [Mus musculus]
Length = 980
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 275/816 (33%), Positives = 415/816 (50%), Gaps = 86/816 (10%)
Query: 16 SIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYP 70
++R +FL +F + GH LV S+ + P GD S+ FVN+GM QFK +FLG A +
Sbjct: 36 AVRDAFLSFFRDRHGHRLVPSATVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFR 95
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPP 129
RV NSQKCVR GG+HNDL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+
Sbjct: 96 RVVNSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-V 154
Query: 130 VSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
+P DRL+ +YF G Q GL D ETRDIWL LGVP + G + NFWEMG TGPCG
Sbjct: 155 YGIPEDRLWVSYFSGDSQTGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCG 214
Query: 190 YSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
+EIHYD+ G S L+E+WN+VF+ H R + ++ L + ++DTG+G
Sbjct: 215 PCTEIHYDLAGGVGSP---------QLVELWNLVFMQHYREADGSLQLLPQRHVDTGMGL 265
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERLV +LQ K STYDTDLF PLL+ I + GA PY ++ +DT+YR+++D+ R
Sbjct: 266 ERLVAVLQGKRSTYDTDLFSPLLDAIHQSCGAPPYSGRVGAADEGRIDTAYRVVADHIRT 325
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
++V +AD + P + LR ++R A+ S +V + G + L + E LG YPE
Sbjct: 326 LSVCIADGVSPGMSGAPLVLRRILRRAVRYSTEVLQAPPG-FLGSLVPVVVETLGSAYPE 384
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLV-KTQPELEQFNIMEEPGLVLGVKYLT 425
++ + KI ++ E+ F A+++ + ++ +T L ++ P V L+
Sbjct: 385 LEKNSVKIASLVSEDEAAF----LASLQRGRRIIDRTVKRLGPSDLF--PAEVAWSLSLS 438
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
L + E+ + DT GL + L + + + + + +
Sbjct: 439 GNLGIPLDLVELMLEEKGVKLDTAGLEQ-------------LAQKEAQHRAQQAEADQED 485
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
+ +V ++ + + P TDD KY+Y N Y F + ++ +
Sbjct: 486 RLCLDVHALEELHRQGIPTTDDSPKYNYTLHPNGD-YEFGLCEARVLQL----------- 533
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
++ +G ++ S+ GL+ D+TN YA GGQ D G YL T Q++ +
Sbjct: 534 ----YSETGTAVASVGAGQR--CGLLLDRTNFYAEQGGQASDRG--YLVRTGQQDMLFPV 585
Query: 606 GELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTC 665
G I+H +V G ++ VD R+GCM HT +HLL+ ALR+ L
Sbjct: 586 AGAQLCGGFILHEAMAPERLQV--GDQVQLYVDKAWRMGCMVKHTATHLLSWALRQTLGP 643
Query: 666 TYQKSCRVFSDECALDFSVYGET-LSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFL 724
T ++ + E L F V +T L+ + + VE Y+ +V+ + + E+P L
Sbjct: 644 TTEQRGSHLNPE-RLRFDVATQTLLTTEQLRTVESYVQEVVGQD-----KPVFMEEVP-L 696
Query: 725 THLTVIPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGHIE 768
H IPG E+YPD V L S S E CCGTH+ +TG +
Sbjct: 697 AHTARIPGLRSLDEVYPDPVRVVSVGVPVAHALGPASQAAMHTSVELCCGTHLLSTGAVG 756
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
+IG + G+ + +TG+ ++ A E G+ LS
Sbjct: 757 DLVIIGERQLVKGITRLLAITGEQAQQAREVGQSLS 792
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RV NSQKC+R GG+HNDL GRD
Sbjct: 61 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVVNSQKCVRAGGRHNDLEDVGRDL 120
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P DRL+ ++
Sbjct: 121 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPEDRLWVSY 166
>gi|440792626|gb|ELR13835.1| alanine-tRNA ligase [Acanthamoeba castellanii str. Neff]
Length = 954
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 283/832 (34%), Positives = 417/832 (50%), Gaps = 102/832 (12%)
Query: 1 MNNPNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNV 60
M +P + + +R +F+DYF Q H V+SS +VP+ D ++ F N+GM QFK +
Sbjct: 1 MESPISDASIEWPVSRVRQTFVDYFVEKQQHLHVRSSSVVPHDDPTLLFANAGMNQFKPI 60
Query: 61 FLGLT-----PAPYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKR 115
FLG A + R ANSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K
Sbjct: 61 FLGQVDPKSEQATWKRAANSQKCIRAGGKHNDLEDVGKDTYHHTFFEMLGNWSFGDYFKE 120
Query: 116 DACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGM 175
+A A + LT LP +RLY TYF G ++ GL DEE R IWL+ +P + + G
Sbjct: 121 EAISWAWDLLTNV-YGLPAERLYATYFRGDEEDGLAADEEARAIWLKF-LPAERVLPYGR 178
Query: 176 KCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTI 235
K NFWEMG+TGPCG SEIH+D G +A + VNAD +IEIWN+VFI R +
Sbjct: 179 KENFWEMGATGPCGPCSEIHFDRLGGRDAA-SLVNADDPTVIEIWNLVFIQFNREDDGKL 237
Query: 236 VPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTD 295
L ++DTG+G ER+ +ILQ K S YDTD+F P+ I++++GA+PYG +
Sbjct: 238 KALPARHVDTGMGLERITSILQKKLSNYDTDVFTPIFARIQEITGAQPYGGRVGADDVDT 297
Query: 296 LDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKEL 352
D +YR+++D+ R ++ A+ D P A + +R ++R A+ + + + G +L
Sbjct: 298 RDMAYRVVADHIRTLSFAINDGAVPGAVGRNYVVRRILRRAVRYGKQILGAEDG-FFHKL 356
Query: 353 SYNIAEILGDVYPEI-QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
+ E LGD +PE+ +D + Q I+ EE L K
Sbjct: 357 VPVVLESLGDAFPELRRDPAHLTQTIMEEEVAFTKTLAK--------------------- 395
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
G+K K + ISG++AF LY TYG ++ +A K L +
Sbjct: 396 --------GLKKFAKATEKMQRGDTISGEVAFRLYGTYGFPLDLTTLMAEEKGLKVDKAG 447
Query: 472 FEQKLNELKERSKA-----KAASNVPDIDLMDLKHFPV--TDDKYKYDYHYDTNSKRYTF 524
F K + + + A KAA + + L+ PV TDD KY D++
Sbjct: 448 F--KAAKTAQPTGAVTAMQKAALALGTHAVAHLQGVPVVPTDDAAKY---IDSD------ 496
Query: 525 PCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQ 584
+D + I G + DS+ +A G++ D+TN YA +GGQ
Sbjct: 497 --VDATVRAIWTGKEF----------------ADSVT---DAAAGVVLDRTNFYAESGGQ 535
Query: 585 IDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLG 644
+ D GV L +T G+ + ++ + G +VH G V + +V G R+ VDA R
Sbjct: 536 VADNGV--LKTST---GQQTVEDVQTYGGFVVHMGAVQGTLRV--GDAVRLSVDASRRHS 588
Query: 645 CMRAHTTSHLLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIND 703
HTT+HL+N ALR VL Q+ V + DFS + + +S D +AAV+K +
Sbjct: 589 LKSNHTTTHLVNHALREVLGAHVEQRGSIVQPERLRFDFS-HNKPVSGDQLAAVDKAVLG 647
Query: 704 VIANQVQVDRRHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISDKE-NVI 751
IA + VD + + + + + + GE YPD D +L S+ E
Sbjct: 648 QIAQDLPVDAKEVPLKDALSINGIRAVFGETYPDPVRVVVAGPTVDELLAAPSNPEWKKY 707
Query: 752 SREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ E C GTH+ T S VI ++ G+R + TGD+++ AV L
Sbjct: 708 AIELCGGTHLARTSEAVSFAVISEEALARGIRRVVAFTGDAARQAVARADEL 759
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 79/128 (61%), Gaps = 13/128 (10%)
Query: 797 VENGKHLSTAASFSQILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLT-----PAPYPRVA 851
VE +HL +S +P+ D ++ F N+GM QFK +FLG A + R A
Sbjct: 26 VEKQQHLHVRSS-------SVVPHDDPTLLFANAGMNQFKPIFLGQVDPKSEQATWKRAA 78
Query: 852 NSQKCIRVGGKHNDLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 911
NSQKCIR GGKHNDL G+D+YHHTFFEMLGNWSF DY+K +A A + LT LP
Sbjct: 79 NSQKCIRAGGKHNDLEDVGKDTYHHTFFEMLGNWSFGDYFKEEAISWAWDLLTN-VYGLP 137
Query: 912 LDRLYFTF 919
+RLY T+
Sbjct: 138 AERLYATY 145
>gi|51260239|gb|AAH79844.1| Aars2 protein [Mus musculus]
Length = 975
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 275/816 (33%), Positives = 415/816 (50%), Gaps = 86/816 (10%)
Query: 16 SIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYP 70
++R +FL +F + GH LV S+ + P GD S+ FVN+GM QFK +FLG A +
Sbjct: 31 AVRDAFLSFFRDRHGHRLVPSATVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFR 90
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPP 129
RV NSQKCVR GG+HNDL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+
Sbjct: 91 RVVNSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-V 149
Query: 130 VSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
+P DRL+ +YF G Q GL D ETRDIWL LGVP + G + NFWEMG TGPCG
Sbjct: 150 YGIPEDRLWVSYFSGDSQTGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCG 209
Query: 190 YSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
+EIHYD+ G S L+E+WN+VF+ H R + ++ L + ++DTG+G
Sbjct: 210 PCTEIHYDLAGGVGSP---------QLVELWNLVFMQHYREADGSLQLLPQRHVDTGMGL 260
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERLV +LQ K STYDTDLF PLL+ I + GA PY ++ +DT+YR+++D+ R
Sbjct: 261 ERLVAVLQGKRSTYDTDLFSPLLDAIHQSCGAPPYSGRVGAADEGRIDTAYRVVADHIRT 320
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
++V +AD + P + LR ++R A+ S +V + G + L + E LG YPE
Sbjct: 321 LSVCIADGVSPGMSGAPLVLRRILRRAVRYSTEVLQAPPG-FLGSLVPVVVETLGSAYPE 379
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLV-KTQPELEQFNIMEEPGLVLGVKYLT 425
++ + KI ++ E+ F A+++ + ++ +T L ++ P V L+
Sbjct: 380 LEKNSVKIASLVSEDEAAF----LASLQRGRRIIDRTVKRLGPSDLF--PAEVAWSLSLS 433
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
L + E+ + DT GL + L + + + + + +
Sbjct: 434 GNLGIPLDLVELMLEEKGVKLDTAGLEQ-------------LAQKEAQHRAQQAEADQED 480
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
+ +V ++ + + P TDD KY+Y N Y F + ++ +
Sbjct: 481 RLCLDVHALEELHRQGIPTTDDSPKYNYTLHPNGD-YEFGLCEARVLQL----------- 528
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
++ +G ++ S+ GL+ D+TN YA GGQ D G YL T Q++ +
Sbjct: 529 ----YSETGTAVASVGAGQR--CGLLLDRTNFYAEQGGQASDRG--YLVRTGQQDMLFPV 580
Query: 606 GELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTC 665
G I+H +V G ++ VD R+GCM HT +HLL+ ALR+ L
Sbjct: 581 AGAQLCGGFILHEAMAPERLQV--GDQVQLYVDKAWRMGCMVKHTATHLLSWALRQTLGP 638
Query: 666 TYQKSCRVFSDECALDFSVYGET-LSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFL 724
T ++ + E L F V +T L+ + + VE Y+ +V+ + + E+P L
Sbjct: 639 TTEQRGSHLNPE-RLRFDVATQTLLTTEQLRTVESYVQEVVGQD-----KPVFMEEVP-L 691
Query: 725 THLTVIPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGHIE 768
H IPG E+YPD V L S S E CCGTH+ +TG +
Sbjct: 692 AHTARIPGLRSLDEVYPDPVRVVSVGVPVAHALGPASQAAMHTSVELCCGTHLLSTGAVG 751
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
+IG + G+ + +TG+ ++ A E G+ LS
Sbjct: 752 DLVIIGERQLVKGITRLLAITGEQAQQAREVGQSLS 787
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RV NSQKC+R GG+HNDL GRD
Sbjct: 56 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVVNSQKCVRAGGRHNDLEDVGRDL 115
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P DRL+ ++
Sbjct: 116 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPEDRLWVSY 161
>gi|47937910|gb|AAH71378.1| Aars protein, partial [Danio rerio]
Length = 757
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 280/790 (35%), Positives = 395/790 (50%), Gaps = 82/790 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + H V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAAQIREKFIDFFRRHE-HQYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 ARLRRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKHLACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG GL D E + IWL+LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYFGGHADAGLEPDLECKQIWLDLGMEESRILPGSMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI R S + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNMDDPNVLEIWNLVFIQFNRESETVLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+ Y + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARAYTGKVGAEDTDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+AL+D PD T + LR ++R A+ S + ++G L + E LGD
Sbjct: 302 ARTITIALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQRG-FFASLVDVVVESLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELRKDPDMVKDIINEEEAQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L +++ T I GD A+ LYDTYG ++ +A + + + AFE++ + +S
Sbjct: 393 LDRKIQSLGDSTTIPGDTAWLLYDTYGFPLDLTALIAEERGMGVDLLAFEEEKKAAQLKS 452
Query: 484 KAKAAS-------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K + ++ ID + K TDD KY Y D N Y F VG V+
Sbjct: 453 QGKGSGDEDHIMLDIYAIDELRNKGVAATDDSPKYKYTSDDNGN-YEF----EQAVGTVL 507
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
A+R R +D + G++ DKT+ YA GGQ D G N
Sbjct: 508 ----------ALRRER--MFVDEVITGQEC--GVLLDKTSFYAEQGGQSFDEGYMLREND 553
Query: 597 TQENG-KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+ E+ + + G ++H G V + KV LT + VD R M HT +H+L
Sbjct: 554 SAEDRMEFTVKNTQVRGGYVLHIGTVYGTLKVGDRLT--LHVDEARRRPIMSNHTATHIL 611
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N LR VL Q+ V D DF+ G +S D V E+ +IA+ V
Sbjct: 612 NYGLRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTDEVRRTEEIAAAMIADAKGVYALD 670
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I S ++ S E C GTH+ N
Sbjct: 671 APLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVEELLADPNSPAGSLTSIEFCGGTHLQN 730
Query: 764 TGHIESCTVI 773
+ H ++
Sbjct: 731 SSHAAPFVIV 740
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMARLRRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKHLACKMALELLTQ-EFGIPIERLYVTY 137
>gi|344300271|gb|EGW30611.1| alanyl-tRNA synthetase, cytoplasmic [Spathaspora passalidarum NRRL
Y-27907]
Length = 959
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 282/846 (33%), Positives = 418/846 (49%), Gaps = 101/846 (11%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
+ +RS+FLD+F +GHT V SS +VP+ D ++ F N+GM Q+K +FLG A
Sbjct: 15 TASKVRSTFLDFFTKKKGHTYVPSSSVVPHNDPTLLFANAGMNQYKPIFLGTVDPASDFA 74
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
R ANSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A + E LT+
Sbjct: 75 SLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIDWSWELLTQ 134
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
L DRLY TYFGG ++ GL D E + WL +GV DHI K NFWEMG GP
Sbjct: 135 V-YGLDKDRLYVTYFGGDEKQGLQPDLEAKQFWLNVGVAEDHILPGSAKDNFWEMGDQGP 193
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIHYD G +A VN D +++E+WN+VFI + R ++ L +IDTG+
Sbjct: 194 CGPCSEIHYDRIGGGRNAADLVNMDDPNVLEVWNVVFIQYNREPDSSLRTLPNKHIDTGM 253
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV+ILQ+K+S YDTD+F P+ + I +++G +PY F ++ +DT+YR+++D+
Sbjct: 254 GFERLVSILQDKSSNYDTDVFGPIFDKITQITGVRPYAGRFGAEDKDGIDTAYRVIADHV 313
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T A+ D P+ + LR ++R G ++L + E +++
Sbjct: 314 RTLTFAICDGGVPNNEGRGYVLRRILRRGSRYVRKYMNYPIGSFFQQLVDVVIEQNKEIF 373
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI + ++ IL EE F K L + + EQ+ I+
Sbjct: 374 PEIVHGASDLKEILNEEEVSFA----------KTLDRGEKLFEQYAII------------ 411
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
++ P T +SG + LYDTYG ++ + +A L + FE+ E +E SK
Sbjct: 412 ---ASKTPEQT-LSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEPGFERAKEESREASK 467
Query: 485 AKAASN--------VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
N V + ++ + P TDD+YKY ++ +V I
Sbjct: 468 GTGTKNGTTLIKLDVHALSSLETELVPKTDDEYKYGTE-----------NIEAKIVSIYD 516
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
G + + + G++ DKT YA GGQ D G +
Sbjct: 517 GAEFVTKINDSTKQ-----------------YGILLDKTPFYAEQGGQEYDTGKLVI--- 556
Query: 597 TQENGKVE--IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+GK E + + G ++H G + +++ G + D R HT +H+
Sbjct: 557 ---DGKSEFTVDNVQVYGGYVLHTGTITEG-ELSVGDSIIASYDELRRWPIRNNHTGTHV 612
Query: 655 LNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN ALR VL + QK V ++ DFS + + LS + VE N I + V
Sbjct: 613 LNYALREVLGDSVDQKGSLVAPEKLRFDFS-HKQALSTAELEKVEAISNKYIKDNKTVYY 671
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKEN----VISREPCCGTHV 761
+ + S+ + L + GE YPD V ++ I S+ +N +S E C GTHV
Sbjct: 672 QDVSLSQAREINGLRAVFGETYPDPVRVVSIGVPVDTLLSNPKNPEWHEVSIEFCGGTHV 731
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGN-IPY 820
TG I+ VI G+R I +TG ++ N + L A+ F Q L++ + +P+
Sbjct: 732 GETGEIKDLVVIEESGIAKGIRRIVAVTGHDAR----NVQRL--ASEFDQELDLADKLPF 785
Query: 821 GDDSIA 826
G D A
Sbjct: 786 GQDKEA 791
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG A R ANSQKCIR GGKHNDL GRD
Sbjct: 42 VPHNDPTLLFANAGMNQYKPIFLGTVDPASDFASLKRAANSQKCIRAGGKHNDLEDVGRD 101
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LT+ L DRLY T+
Sbjct: 102 SYHHTFFEMLGNWSFGDYFKKEAIDWSWELLTQ-VYGLDKDRLYVTY 147
>gi|255580622|ref|XP_002531134.1| alanyl-tRNA synthetase, putative [Ricinus communis]
gi|223529283|gb|EEF31254.1| alanyl-tRNA synthetase, putative [Ricinus communis]
Length = 1025
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 278/820 (33%), Positives = 418/820 (50%), Gaps = 108/820 (13%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
+K +R +F+ +F + + H KSSP+VP D ++ F N+GM QFK +FLG +
Sbjct: 83 AKKVRDTFISFFEDKK-HVHWKSSPVVPVNDPTLLFANAGMNQFKPIFLGTADPNTALSK 141
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+KR+A A E LTK
Sbjct: 142 LSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKREAIGWAWELLTKI 201
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
LP DR+Y TYFGG ++ GL D E RD WL+ +P + + G K NFWEMG TGPC
Sbjct: 202 -YKLPADRIYATYFGGDEKAGLAPDAEARDFWLQF-LPPERVLPFGCKDNFWEMGDTGPC 259
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G +EIHYD G A VN D IEIWN+VFI R S ++ PL ++DTG+G
Sbjct: 260 GPCTEIHYDRVGN-RDASQLVNNDDPTCIEIWNLVFIQFNRESDGSLKPLPAKHVDTGMG 318
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
FERL ++LQNK S YDTD+FLP+ + I++ +GA+PY + + +D +YR+++D+ R
Sbjct: 319 FERLTSVLQNKMSNYDTDVFLPIFDAIQQATGARPYSGKVGSDDVDRVDMAYRVVADHIR 378
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
++ A+AD P + LR ++R A+ +V K ++G L + +++GDV+P
Sbjct: 379 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQEG-FFNGLVNIVVKVMGDVFP 437
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E+ + +I+ I+ EE F K L+K G++
Sbjct: 438 ELIQNEVRIREIIKEEEASFG----------KTLLK------------------GIEKFK 469
Query: 426 KQLARDPSITEISGDM-----AFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
K + E+ G + AF L+DTYG ++ Q +A + L + E F ++E +
Sbjct: 470 K------AAQEVQGKVSCLQDAFVLWDTYGFPLDLTQLMAEERGLWVDVEGFNNAMDEAR 523
Query: 481 ERSKAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
ERS+ +MD K VTDD YK+ + D S +
Sbjct: 524 ERSRNAQNKQAGGDIIMDADATSALHKKGVSVTDDSYKFIWFQDHESV----------IK 573
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
I G + G++ S + VG++ + T+ YA GGQI D G
Sbjct: 574 AIYTGTEFL------------GSTTSSNE------VGIVLESTSFYAEQGGQIFDTG--S 613
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHTT 651
L T G ++ + G +VH G++ ++ +++ G +VD R HT
Sbjct: 614 LEGTF---GSFQVSNVQIFGGFVVHIGSLTRAAPRLSVGDKVICKVDYDRRTLIAPNHTC 670
Query: 652 SHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ 710
+H+LN ALR VL QK V ++ DFS +G+ + + +E +N+ I +++
Sbjct: 671 THMLNFALREVLGNHVDQKGSIVLPEKLRFDFS-HGKPVDPALLRKIESIVNEQIKAELE 729
Query: 711 VDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKEN----VISREPCCG 758
V + SE + L + GE+YPD V ++ I +D EN IS E C G
Sbjct: 730 VSAKEATLSEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWSSISAELCGG 789
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
TH+ NT ++ ++ + GVR I +T D + A+E
Sbjct: 790 THISNTKEAKAFALLSEEGIAKGVRRITAVTTDGAFKAME 829
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK +FLG + R N+QKCIR GGKHNDL G+D
Sbjct: 108 VPVNDPTLLFANAGMNQFKPIFLGTADPNTALSKLSRACNTQKCIRAGGKHNDLDDVGKD 167
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+KR+A A E LTK LP DR+Y T+
Sbjct: 168 TYHHTFFEMLGNWSFGDYFKREAIGWAWELLTK-IYKLPADRIYATY 213
>gi|440902431|gb|ELR53223.1| Alanyl-tRNA synthetase, mitochondrial, partial [Bos grunniens
mutus]
Length = 992
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 287/830 (34%), Positives = 421/830 (50%), Gaps = 91/830 (10%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----AP 68
+ ++R +FL +F + GH LV S+ + P GD S+ FVN+GM QFK +FLG + P A
Sbjct: 46 AAAVRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAG 105
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSF-NDYYKRDACRMALEFLTK 127
+ RVANSQKCVR GG+H+DL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+
Sbjct: 106 FRRVANSQKCVRAGGRHSDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ 165
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
+P DRL+ +YFGG + GL D E+RDIWL LGVP + G + NFWEMG TGP
Sbjct: 166 -VYGIPEDRLWVSYFGGDPKAGLGPDLESRDIWLSLGVPASRVLSFGPEENFWEMGDTGP 224
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG +EIHYD+ G A L+E+WN+VF+ H R + ++ PL + ++DTG+
Sbjct: 225 CGPCTEIHYDLAG---------GAGAPQLVELWNLVFMQHNREADGSLQPLPQRHVDTGM 275
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ERLV +LQ + STYDTDLF PLL+ I + GA PY ++ DT+YR+++D+
Sbjct: 276 GLERLVAVLQGRLSTYDTDLFSPLLDAIHQGCGAPPYSGRIGAADEGRTDTAYRVVADHI 335
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++V +AD + P + LR ++R A+ S +V + G + L + E LGD Y
Sbjct: 336 RTLSVCIADGVSPGMSGAPLVLRRILRRAVRFSTEVLRAPPG-FLGSLVPVVVETLGDAY 394
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLV-KTQPELEQFNIMEEPGLVLGVKY 423
PE++ S +I ++ E+ F A+++ + ++ +T L ++ P V
Sbjct: 395 PELRRSSAQIASLVSEDEAAF----LASLQRGRRVIERTLKRLGPSDVF--PAEVAWSLS 448
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L+ L + E+ + DT GL + + QE A + L EQ L
Sbjct: 449 LSGNLGLPLDLVELMLEEKGVPLDTAGLER-LAQEEAQHRALQ-AEPVQEQGLR------ 500
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
NV + + + P T+D KY Y Y F + ++ Q++
Sbjct: 501 -----LNVHTLGELQRRGVPPTNDSPKYSYSLQPGGS-YKFGTCEAQVL------QLYTE 548
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
D A+ ASI Q GL+ DKTN YA GGQ D G YL Q++
Sbjct: 549 DGTAV------ASIGDGQR-----CGLLLDKTNFYAEQGGQASDRG--YLVLVGQQDVLF 595
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
+ G I+H VV+ ++ G ++ VD RL CM HT HLLN ALR+VL
Sbjct: 596 PVARAQVCGGFILH--EVVAPERLRVGDQVQLHVDEAWRLSCMEKHTAIHLLNWALRQVL 653
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
T Q+ + + D + L+ + + AVE + + V +M L
Sbjct: 654 GPGTEQRGSHLNPERLRFDVATQA-PLTPEQLRAVEVTVQKAVGRDEAV---YMEEVALA 709
Query: 723 FLTHLTVIPG-----EIYPDDVIL----------IDISDKENV-ISREPCCGTHVFNTGH 766
H +PG E+YPD V + +D + + + S E CCGTH+ TG
Sbjct: 710 RTAH---VPGLRSLDEVYPDPVRVVSVGVPVAHALDPASQAALHTSVELCCGTHLLRTGA 766
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL-----STAASFSQ 811
I +IG + G+ + + G+ ++ A E G+ L +TAA SQ
Sbjct: 767 IGDLVIIGERQLVKGITRLLAVNGEQAQQAREVGQRLAQEVEATAARLSQ 816
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 76/107 (71%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG + P A + RVANSQKC+R GG+H+DL GRD
Sbjct: 73 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHSDLEDVGRDL 132
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P DRL+ ++
Sbjct: 133 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPEDRLWVSY 178
>gi|121719583|ref|XP_001276490.1| alanyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
gi|119404702|gb|EAW15064.1| alanyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
Length = 961
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 276/813 (33%), Positives = 418/813 (51%), Gaps = 96/813 (11%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
++ +R +FLD+F GHT V SSP+VP+ D ++ F N+GM QFK++FLG T P+
Sbjct: 12 TARRVRDTFLDFF-RKNGHTFVPSSPVVPHSDPTLLFTNAGMNQFKSIFLG-TVDPHSDF 69
Query: 73 A------NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K DA R + E LT
Sbjct: 70 ARLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKEDAIRYSWELLT 129
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K + RLY TYF G ++ GL D E + +W +GVP DHI MK NFWEMG G
Sbjct: 130 KV-YGIDPQRLYVTYFEGHEEGGLEPDLEAKALWTAVGVPEDHILPGNMKDNFWEMGDQG 188
Query: 187 PCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
PCG SEIHYD + G +S L VN D +++EIWN VFI + R + T+ PL ++DT
Sbjct: 189 PCGPCSEIHYDRIGGRNASHL--VNQDDPNVLEIWNNVFIQYNRETDRTLRPLPNKHVDT 246
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV++LQ+K+S YDTD+F PL I+ ++GA+ Y F + + +DT+YR+++D
Sbjct: 247 GMGFERLVSVLQDKSSNYDTDVFSPLFGAIKDITGAREYRGMFGSGDADGIDTAYRVVAD 306
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R +T A++D + P++ + +R V+R + F+V+ G +L + + LG+
Sbjct: 307 HVRTLTFAISDGVTPNSDGRGYVVRRVLRRGARYARKYFQVEIGNFFSKLVPILVDQLGE 366
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
++PE++ + IL EE F K L + + + E +
Sbjct: 367 MFPELRKKQQDVMEILDEEEISFA----------KTLDRGERQFESY------------- 403
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
Q A+ ++ G + LYDT+G ++ + +A + L + FE+ + KE
Sbjct: 404 ---AQQAKLKGNDKLHGADVWRLYDTFGFPVDLTRLMAEERGLKIDDTEFEEARLKAKEA 460
Query: 483 SKA--KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
SK K+A++ +D+ DL P TDD +K++ C V
Sbjct: 461 SKGQKKSATDTVKLDVHDLGKLEKMNDVPKTDDSFKFEM------------CNINAEVKA 508
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+ +VF D I +G+I D+TN YA GGQ +DIG +
Sbjct: 509 IYHGKVFHSDTAVISAGEQ--------------IGIILDRTNFYAEQGGQENDIGRIIID 554
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
+ +E+ ++ G ++H G + SF V G T E D R HT +H
Sbjct: 555 GKAE----LEVSDVQLYAGYVLHTGFMKYGSFSV--GDTVLCEYDELRRWPIRNNHTGTH 608
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
+LN AL+RVL QK V +++ DFS + ++ + +E + I V
Sbjct: 609 ILNFALKRVLGDSVEQKGSLVAAEKLRFDFS-HKSAVTEKELERIEDISTEYIRQNCDVY 667
Query: 713 RRHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISD-KENVISREPCCGTH 760
+ + + +T + + GE YPD + IL ++ D + N +S E C GTH
Sbjct: 668 SQEVPLATARQITGVRAVFGETYPDPVRVVSVGVEVEEILQNVKDPRWNEVSIEFCGGTH 727
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
V TG I+ ++ G+R I +TG+ +
Sbjct: 728 VQKTGDIKDLVILEESGIAKGIRRIIAVTGEDA 760
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 73/108 (67%), Gaps = 8/108 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA------NSQKCIRVGGKHNDLSFAGR 871
+P+ D ++ F N+GM QFK++FLG T P+ A NSQKCIR GGKHNDL G+
Sbjct: 38 VPHSDPTLLFTNAGMNQFKSIFLG-TVDPHSDFARLKSAVNSQKCIRAGGKHNDLDDVGK 96
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
DSYHHTFFEMLGNWSF DY+K DA R + E LTK + RLY T+
Sbjct: 97 DSYHHTFFEMLGNWSFGDYFKEDAIRYSWELLTK-VYGIDPQRLYVTY 143
>gi|300794887|ref|NP_001178140.1| alanyl-tRNA synthetase, mitochondrial [Bos taurus]
Length = 983
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 287/830 (34%), Positives = 420/830 (50%), Gaps = 91/830 (10%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----AP 68
+ ++R +FL +F + GH LV S+ + P GD S+ FVN+GM QFK +FLG + P A
Sbjct: 37 AAAVRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAG 96
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSF-NDYYKRDACRMALEFLTK 127
+ RVANSQKCVR GG+H+DL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+
Sbjct: 97 FRRVANSQKCVRAGGRHSDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ 156
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
+P DRL+ +YFGG + GL D E+RDIWL LGVP + G + NFWEMG TGP
Sbjct: 157 -VYGIPEDRLWVSYFGGDPKAGLGPDLESRDIWLSLGVPASRVLSFGPEENFWEMGDTGP 215
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG +EIHYD+ G A L+E+WN+VF+ H R + ++ PL + ++DTG+
Sbjct: 216 CGPCTEIHYDLAG---------GAGAPQLVELWNLVFMQHNREADGSLQPLPQRHVDTGM 266
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ERLV +LQ + STYDTDLF PLL+ I + GA PY ++ DT+YR+++D+
Sbjct: 267 GLERLVAVLQGRLSTYDTDLFSPLLDAIHQGCGAPPYSGRIGAADEGRTDTAYRVVADHI 326
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++V +AD + P + LR ++R A+ S +V + G + L + E LGD Y
Sbjct: 327 RTLSVCIADGVSPGMSGAPLVLRRILRRAVRFSTEVLRAPPG-FLGSLVPVVVETLGDAY 385
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLV-KTQPELEQFNIMEEPGLVLGVKY 423
PE++ S +I ++ E+ F A+++ + ++ +T L ++ P V
Sbjct: 386 PELRRSSAQIASLVSEDEAAF----LASLQRGRRVIERTLKRLGPSDVF--PAEVAWSLS 439
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L+ L + E+ + DT GL + + QE A + L EQ L
Sbjct: 440 LSGNLGLPLDLVELMLEEKGVPLDTAGLER-LAQEEAQHRALQ-AEPVQEQGLR------ 491
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
NV + + + P TDD KY Y Y F + ++ Q++
Sbjct: 492 -----LNVHALGELQRRGVPPTDDSPKYSYSLQPGGS-YKFGTCEAQVL------QLYTE 539
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
D A+ ASI Q GL+ DKTN YA GGQ D G YL Q++
Sbjct: 540 DGTAV------ASIGDGQ-----HCGLLLDKTNFYAEQGGQASDRG--YLVLVGQQDVLF 586
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
+ G I+H VV+ ++ G ++ VD RL CM HT HLLN ALR+VL
Sbjct: 587 PVARAQVCGGFILH--EVVAPERLRVGDQVQLHVDEAWRLSCMEKHTAIHLLNWALRQVL 644
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
T Q+ + + D + L+ + + AVE + + V +M L
Sbjct: 645 GPGTEQRGSHLNPERLRFDVATQA-PLTPEQLRAVEVTVQKAVGRDEAV---YMEEVALA 700
Query: 723 FLTHLTVIPG-----EIYPDDVIL----------IDISDKENV-ISREPCCGTHVFNTGH 766
H +PG E+YPD V + +D + + + S E CCGTH+ TG
Sbjct: 701 RTAH---VPGLRSLDEVYPDPVRVVSVGVPVAHALDPASQAALHTSVELCCGTHLLRTGA 757
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL-----STAASFSQ 811
I +IG + G+ + + G+ ++ A E G+ L + AA SQ
Sbjct: 758 IGDLVIIGERQLVKGITRLLAVNGEQAQQAREVGQRLAQEVEAAAARLSQ 807
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 76/107 (71%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG + P A + RVANSQKC+R GG+H+DL GRD
Sbjct: 64 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHSDLEDVGRDL 123
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P DRL+ ++
Sbjct: 124 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPEDRLWVSY 169
>gi|58268868|ref|XP_571590.1| alanine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21]
gi|134113024|ref|XP_774788.1| hypothetical protein CNBF2180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257434|gb|EAL20141.1| hypothetical protein CNBF2180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227825|gb|AAW44283.1| alanine-tRNA ligase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1012
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 293/826 (35%), Positives = 412/826 (49%), Gaps = 102/826 (12%)
Query: 17 IRSSFLDYFCNTQG--HTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP---- 70
+R +F+DYF N G HT SS +VP+ DD++ F N+GM Q+K +FLG T P
Sbjct: 65 VRQTFIDYFVNQPGFEHTFWPSSGVVPFDDDTLLFANAGMNQYKPLFLG-TADPKSELSK 123
Query: 71 --RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R ANSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K A MA + LT+
Sbjct: 124 LIRAANSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKVGALTMAWDLLTRV 183
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
LP DRLY TYF G + GL D E + IW +LGVP HI K NFWEMG+TGPC
Sbjct: 184 -YGLPKDRLYVTYFEGDAKQGLEPDSEAQQIWRDLGVPESHILPGNAKDNFWEMGATGPC 242
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G SEIH+D G +A VNAD +++EIWN VFI + R + + L ++DTG+G
Sbjct: 243 GPCSEIHFDRIGGRDAA-HLVNADDPNVLEIWNNVFIQYNREPSGELRTLPAKHVDTGMG 301
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
FERLV++L N +S YDTD+F P+ I++++GA+PY ++ +DT+YR+++D+ R
Sbjct: 302 FERLVSVLHNVSSNYDTDVFTPIFSKIQELTGARPYEGKLGDEDKDGIDTAYRVIADHIR 361
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
+T+A++D PD + LR V+R + + + F VK G L + E LG ++P
Sbjct: 362 TLTIAISDGGIPDKDGRGYVLRRVLRRGVRYASNKFGVKIGTFFSSLVPTVVESLGPIFP 421
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E+ I ++ IL EE F G L KY T
Sbjct: 422 EVTKKIPELTEILNEEEASFARTLNR------------------------GEALFNKYAT 457
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ D T +SG + LYDTYG ++ Q +A + L + EAFE+ E E SKA
Sbjct: 458 TAI--DEKRTVLSGKDIWRLYDTYGFPVDLTQIMAEERGLKIDQEAFEKARLESLEASKA 515
Query: 486 ---KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ A + +D+ DL P TDD +K YH D + N+ I
Sbjct: 516 GGKEKAGALVKLDVHDLAALEANDAVPKTDDSFK--YHLDD---------IKANVKSIYH 564
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
G + + +L N G++ D+TN YA +GGQ D GV +
Sbjct: 565 GSKFLN---------------STSELPPNTTFGILLDRTNFYAESGGQEYDTGVIAI--- 606
Query: 597 TQENGKVE--IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+GK E + ++ G ++H G + + G D R HT +H+
Sbjct: 607 ---DGKAEFKVEDVQVYNGYVLHIGRMEEG-DIEIGDEVICTYDELRRWPIRNNHTGTHI 662
Query: 655 LNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN ALR VL QK V + DFS +G++++V + +E ND I V V
Sbjct: 663 LNFALREVLGDHIDQKGSLVAPTKLRFDFS-HGKSIAVPELIKIEGICNDWIKRGVPVYA 721
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDIS------------DKENVISREPCCGTHV 761
+ M +E + L + GE YPD V ++ + K S E C GTHV
Sbjct: 722 KDMPLAEAYKIPGLRAVFGEAYPDPVRVVSLGYPLEDIAKNVEDSKWRQTSIEFCGGTHV 781
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTG----DSSKAAVENGKHL 803
T I+ +I S G+R I +TG D S+ VE + L
Sbjct: 782 AKTDDIKDFVIIEESSIAKGIRRIVAVTGHDAHDVSRKGVEFERKL 827
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/110 (56%), Positives = 75/110 (68%), Gaps = 8/110 (7%)
Query: 816 GNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP------RVANSQKCIRVGGKHNDLSFA 869
G +P+ DD++ F N+GM Q+K +FLG T P R ANSQKCIR GGKHNDL
Sbjct: 88 GVVPFDDDTLLFANAGMNQYKPLFLG-TADPKSELSKLIRAANSQKCIRAGGKHNDLDDV 146
Query: 870 GRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
G+D+YHHTFFEMLGNWSF DY+K A MA + LT+ LP DRLY T+
Sbjct: 147 GKDTYHHTFFEMLGNWSFGDYFKVGALTMAWDLLTR-VYGLPKDRLYVTY 195
>gi|296474486|tpg|DAA16601.1| TPA: alanyl-tRNA synthetase 2, mitochondrial-like [Bos taurus]
Length = 983
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 286/828 (34%), Positives = 419/828 (50%), Gaps = 87/828 (10%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
+ ++R +FL +F + GH LV S+ + P GD S+ FVN+GM QFK +FLG A
Sbjct: 37 AAAVRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAG 96
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSF-NDYYKRDACRMALEFLTK 127
+ RVANSQKCVR GG+H+DL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+
Sbjct: 97 FRRVANSQKCVRAGGRHSDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ 156
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
+P DRL+ +YFGG + GL D E+RDIWL LGVP + G + NFWEMG TGP
Sbjct: 157 -VYGIPEDRLWVSYFGGDPKAGLGPDLESRDIWLSLGVPASRVLSFGPEENFWEMGDTGP 215
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG +EIHYD+ G A L+E+WN+VF+ H R + ++ PL + ++DTG+
Sbjct: 216 CGPCTEIHYDLAG---------GAGAPQLVELWNLVFMQHNREADGSLQPLPQRHVDTGM 266
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ERLV +LQ + STYDTDLF PLL+ I + GA PY ++ DT+YR+++D+
Sbjct: 267 GLERLVAVLQGRLSTYDTDLFSPLLDAIHQGCGAPPYSGRIGAADEGRTDTAYRVVADHI 326
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++V +AD + P + LR ++R A+ S +V + G + L + E LGD Y
Sbjct: 327 RTLSVCIADGVSPGMSGAPLVLRRILRRAVRFSTEVLRAPPG-FLGSLVPVVVETLGDAY 385
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLV-KTQPELEQFNIMEEPGLVLGVKY 423
PE++ S +I ++ E+ F A+++ + ++ +T L ++ P V
Sbjct: 386 PELRRSSAQIASLVSEDEAAF----LASLQRGRRVIERTLKRLGPSDVF--PAEVAWSLS 439
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L+ L + E+ + DT GL + + QE A + L EQ L
Sbjct: 440 LSGNLGLPLDLVELMLEEKGVPLDTAGLER-LAQEEAQHRALQ-AEPVQEQGLR------ 491
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
NV + + + P TDD KY Y Y F + ++ Q++
Sbjct: 492 -----LNVHALGELQRRGVPPTDDSPKYSYSLQPGGS-YKFGTCEAQVL------QLYTE 539
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
D A+ ASI Q H GL+ DKTN YA GGQ D G YL Q++
Sbjct: 540 DGTAV------ASIGDGQ--H---CGLLLDKTNFYAEQGGQASDRG--YLVLVGQQDVLF 586
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
+ G I+H VV+ ++ G ++ VD RL CM HT HLLN ALR+VL
Sbjct: 587 PVARAQVCGGFILH--EVVAPERLRVGDQVQLHVDEAWRLSCMEKHTAIHLLNWALRQVL 644
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM---RAS 719
T Q+ + + D + L+ + + AVE + + V + R +
Sbjct: 645 GPGTEQRGSHLNPERLRFDVATQA-PLTPEQLRAVEVTVQKAVGRDEAVYMEEVALARTA 703
Query: 720 ELPFLTHLTVIPGEIYPDDVIL----------IDISDKENV-ISREPCCGTHVFNTGHIE 768
+P L L E+YPD V + +D + + + S E CCGTH+ TG I
Sbjct: 704 HVPGLRSLD----EVYPDPVRVVSVGVPVAHALDPASQAALHTSVELCCGTHLLRTGAIG 759
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL-----STAASFSQ 811
+IG + G+ + + G+ ++ A E G+ L + AA SQ
Sbjct: 760 DLVIIGERQLVKGITRLLAVNGEQAQQAREVGQRLAQEVEAAAARLSQ 807
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 74/107 (69%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RVANSQKC+R GG+H+DL GRD
Sbjct: 64 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHSDLEDVGRDL 123
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P DRL+ ++
Sbjct: 124 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPEDRLWVSY 169
>gi|431912458|gb|ELK14592.1| Alanyl-tRNA synthetase, cytoplasmic [Pteropus alecto]
Length = 1118
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 280/825 (33%), Positives = 409/825 (49%), Gaps = 86/825 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 137 LTASEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 195
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 196 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 255
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +PL GL D E + IW +LG+ I MK NFWEMG TG
Sbjct: 256 QE-FGIPLXXXXXXXXAA----GLEPDLECKQIWQDLGLDDTKILPGNMKDNFWEMGDTG 310
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 311 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDTG 369
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 370 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 429
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 430 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASKG-FFATLVDVVVQSLGDA 488
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 489 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 520
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ K+ +LK
Sbjct: 521 LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLLVDMDGFEEERKMAQLKS 580
Query: 482 RSKAKAAS-----NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ I+ + K TDD KY+YH D+ S Y F + V V+
Sbjct: 581 QGKGAGGEDHIMLDIYAIEELREKSLEATDDSPKYNYHSDS-SGSYAF----ESAVATVM 635
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
DK I +G G++ DKT YA GGQI D G + + +
Sbjct: 636 ---ALRRDKTFIEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 681
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + S KV G R+ +D R M HT +H+L
Sbjct: 682 SSEDKTEFTVKNTQVRGGYVLHIGTIYGSLKV--GDQVRLFIDEPRRRPVMSNHTATHIL 739
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL Q+ V D DF+ G +S + VE+ N++I V +
Sbjct: 740 NFALRSVLGEADQRGSLVAPDRLRFDFTAKG-AMSTQQIKEVEEIANEMIEAAKPVYTQD 798
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ + L + E YPD V ++ I ++ S E C GTH+ N
Sbjct: 799 CPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLQN 858
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H + ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 859 SSHAGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLS 903
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 65/93 (69%), Gaps = 5/93 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 164 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 223
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 905
YHHTFFEMLG+WSF DY+K AC+MALE LT+
Sbjct: 224 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ 256
>gi|403169458|ref|XP_003328904.2| alanyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375167967|gb|EFP84485.2| alanyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1012
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 276/824 (33%), Positives = 413/824 (50%), Gaps = 80/824 (9%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----R 71
+R +F +YF N HT V SS +VP+ D ++ F N+GM Q+K +FLG +P R
Sbjct: 61 VRKTFFEYFQNQHAHTFVHSSSVVPFDDPTLLFANAGMNQYKPIFLGTIDPSHPFKNLKR 120
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K +A MA + LT+ +
Sbjct: 121 AVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKSEAIHMAWDLLTRV-YA 179
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY TYF G L D E++ IW++LGV D + K NFWEMG++GPCG
Sbjct: 180 LPKDRLYVTYFQGDPAQNLLPDLESKQIWIDLGVHPDKVLPGNAKDNFWEMGTSGPCGPC 239
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIHYD G ++A VN D ++EIWN VFI + R + ++ PL ++DTG+GFER
Sbjct: 240 SEIHYDRVGGRNAA-ELVNQDDPMVLEIWNNVFIQYNREPSGSLKPLPARHVDTGMGFER 298
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV++LQ+KTS YDTD+F PL + I++++GA+PY + +DT+YR+++D+ R +T
Sbjct: 299 LVSVLQDKTSNYDTDVFKPLFDRIQELTGARPYAGKLGEDDVDGIDTAYRVIADHVRTLT 358
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A++D P+ + LR ++R F V G L+ + + +GDV+PEI+
Sbjct: 359 FAISDGGVPNNVGRGYVLRRILRRGARYVRKKFDVPIGNFFSRLAPTLIDQMGDVFPEIR 418
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+++ IL EE F + + G + KY K
Sbjct: 419 SKTEELKEILDEEE------------------------ASFALTLDRGEKMFEKYAEKAK 454
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA--- 485
+ G + LYDTYG ++ +A +L + H+ FE KE SK
Sbjct: 455 KE--GKKNLDGQDVWRLYDTYGFPVDLTLLMAEEARLGIDHDGFEMAQAASKELSKGGKK 512
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
K ++D+ + D K D +S ++ + T V + D F
Sbjct: 513 KVVGTAVELDVHAIAELESNDKVPKTD-----DSSKFASSSI-TATVKAIYYDGKF---- 562
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
H+ + A S + G+I DKTN YA GGQ +D G LTN ++ ++
Sbjct: 563 ----HSSTEAVPSSSR------CGIILDKTNFYAEQGGQENDTGS--LTNPEKQT-TFDV 609
Query: 606 GELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTC 665
++ G ++H G +VS + G + D R HT +H+LN ALR L
Sbjct: 610 EDVQVYNGYVLHSG-LVSEGVLQVGDSVSAAYDELRRWPIRNNHTGTHVLNWALRETLGD 668
Query: 666 TY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFL 724
QK V + DFS + + +++D ++ +E N I+ V R MR E +
Sbjct: 669 HIDQKGSLVAPSKLRFDFS-HKQQVTIDELSKIESTCNQWISKSFPVAAREMRLDEAKKI 727
Query: 725 THLTVIPGEIYPD------------DVILIDISD-KENVISREPCCGTHVFNTGHIESCT 771
L + GE YPD D++ D++D K + S E C GTHV T I+
Sbjct: 728 PGLRAVFGEAYPDPVRVVVVGPNPFDLLDADLTDPKWSNYSVEFCGGTHVKLTSEIKQLV 787
Query: 772 VIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNV 815
++ GVR I +TG+ +++ + K + A QI+ +
Sbjct: 788 LVEESGIAKGVRRIVAVTGEEARSVSQQAKDIE--AKLDQIIGL 829
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG +P R NSQKCIR GGKHNDL G+D
Sbjct: 84 VPFDDPTLLFANAGMNQYKPIFLGTIDPSHPFKNLKRAVNSQKCIRAGGKHNDLDDVGKD 143
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K +A MA + LT+ +LP DRLY T+
Sbjct: 144 TYHHTFFEMLGNWSFGDYFKSEAIHMAWDLLTR-VYALPKDRLYVTY 189
>gi|395534200|ref|XP_003769135.1| PREDICTED: alanine--tRNA ligase, mitochondrial [Sarcophilus
harrisii]
Length = 990
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 282/836 (33%), Positives = 419/836 (50%), Gaps = 109/836 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R++FL +F + GH LV S+ + P D + FVN+GM QFK +FLG A + R
Sbjct: 47 VRTAFLHFFRDRYGHQLVPSASVRPRSDPGLLFVNAGMNQFKPIFLGTVDPRSELARFRR 106
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPV 130
VANSQKCVR GGKHNDL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+
Sbjct: 107 VANSQKCVRTGGKHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VY 165
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+P DRL+ TYF G+ GL D E+RDIWL LGVP + G NFWEMG TGPCG
Sbjct: 166 GIPQDRLWVTYFDGNPSEGLAPDYESRDIWLSLGVPSTRVLPFGSMENFWEMGETGPCGP 225
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
+EIHYD+ L+E+WN+VF+ + R + ++ PL + ++DTG+G E
Sbjct: 226 CTEIHYDLS---------AGVGPPQLVELWNLVFMQYNREADRSLQPLPQRHVDTGMGLE 276
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV +LQNK STYDTDLF PLL I + A PY +++ +D +YR+++D+ R +
Sbjct: 277 RLVAVLQNKHSTYDTDLFSPLLTAIHQGCRAPPYQGHVGVADKGRIDMAYRVVADHVRTL 336
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
++ +AD ++P T LR ++R A+ S +V + G + L + EILGD YPE+
Sbjct: 337 SICMADGVYPGMTGASLILRQILRRAIRFSSEVLQAPPG-FLSSLVPIVVEILGDAYPEL 395
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
Q + ++I ++ EE F + +E G + + +
Sbjct: 396 QKNRSQIVSLITEEEGAF-----------------------LSCLER-----GRRIIERT 427
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ-KLNELKERSKAK 486
L++ ++A++L GL +++ + K + L +Q E + RS+A+
Sbjct: 428 LSQLGPSELFPAEVAWSLSGNLGLPLDLVGLMLEEKGIQLDSAGLQQLSQEEAQRRSQAQ 487
Query: 487 AASNVPD----IDLMDLKHF-----PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
A +D+ L H P TDD KY+Y N Y F + ++
Sbjct: 488 QAKPAEKLELCLDVHALGHLRKQGVPPTDDSSKYNYSLLPNGC-YEFGTCEAEII----- 541
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
+++ +D G +IDS+ GL+ DKT YA GGQ D G YL
Sbjct: 542 -RLYSLD---------GVAIDSVGGGQRC--GLLLDKTCFYAEQGGQASDRG--YLICKG 587
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
Q++ + + G I+H V++ + G ++ VD RLGCM+ HT +HLL+
Sbjct: 588 QQDVLFPVIGAQTYGGFILH--EVIAPETLKVGDQVQLYVDEEWRLGCMKKHTATHLLSW 645
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR+ L T Q + + D S +L+ + VEK I + + V +M
Sbjct: 646 ALRQELGPGTEQCGSHLSPERLRFDVSTLA-SLTPKQLQTVEKTIQEAVGRDEPV---YM 701
Query: 717 RASELPFLTHLTVIPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTH 760
L T +PG EIYPD V +L S S E CCGTH
Sbjct: 702 AEVALELTTQ---VPGLRSLNEIYPDPVRVVSVGVPVASVLAPTSQAALHTSVELCCGTH 758
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL-----STAASFSQ 811
+ TG I T++G + + G+ + +TG+ ++ A + G++L +T A SQ
Sbjct: 759 LLRTGAIGDLTIVGERQLSKGIIRLVAVTGEQAQQARDVGQNLAEEVEATVARLSQ 814
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P D + FVN+GM QFK +FLG A + RVANSQKC+R GGKHNDL GRD
Sbjct: 71 PRSDPGLLFVNAGMNQFKPIFLGTVDPRSELARFRRVANSQKCVRTGGKHNDLEDVGRDL 130
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P DRL+ T+
Sbjct: 131 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPQDRLWVTY 176
>gi|410959304|ref|XP_003986251.1| PREDICTED: alanine--tRNA ligase, mitochondrial [Felis catus]
Length = 985
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 275/818 (33%), Positives = 415/818 (50%), Gaps = 86/818 (10%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
+ ++R +FL +F + GH LV S+ + P GD S+ FVN+GM QFK +FLG A
Sbjct: 39 ATAVRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAG 98
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSF-NDYYKRDACRMALEFLTK 127
+ RVANSQKCVR GG+HNDL GRD HHTFFEMLGNW+F +Y+K +ACRMA E LT+
Sbjct: 99 FRRVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACRMAWELLTQ 158
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
+P DRL+ +YFGG + GL D E+RDIWL LGV H+ G + NFWEMG+TGP
Sbjct: 159 -VYGIPEDRLWVSYFGGDPKAGLDPDLESRDIWLSLGVCASHVLSFGPQENFWEMGNTGP 217
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG +EIHYD+ G + L+E+WN+VFI H R + ++ PL + ++DTG+
Sbjct: 218 CGPCTEIHYDLAGRGGAP---------QLVELWNLVFIQHNREADGSLQPLPQRHVDTGM 268
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ERLV +LQ STYDTDLF PLL+ I++ G PY ++ D +YR+++D+
Sbjct: 269 GLERLVAVLQGARSTYDTDLFSPLLDAIQQGCGVPPYLGRVGAADEGRTDMAYRVVADHI 328
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++V +AD + P + LR ++R A+ S +V + G + L + E LGD Y
Sbjct: 329 RTLSVCIADGVCPGMSGAPLVLRRILRRAVRFSTEVLRAPPG-FLGSLVPVVVETLGDAY 387
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLV-KTQPELEQFNIMEEPGLVLGVKY 423
PE++ +I ++ E+ F A+++ + ++ +T L ++ P V
Sbjct: 388 PELRKHSAQIVNLVSEDEAAF----LASLQRGRHIIDQTLRRLGPSDLF--PAEVAWSLS 441
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L+ L + E+ + D+ GL++ L E + + + +
Sbjct: 442 LSGNLGLPLDLVELMLEEKGVRLDSAGLAR-------------LAQEEGQHRSRQAEPAQ 488
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+ NV + + + P TDD KY+Y S Y F + ++ Q++
Sbjct: 489 ERGLQLNVHALGDLQRRGVPPTDDSPKYNYSLRP-SGGYEFGTCEAQVL------QLYTE 541
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
D A+ AS+ Q GL+ DKTN YA GGQ D G YL QE+
Sbjct: 542 DGTAV------ASVGKGQR-----CGLLLDKTNFYAEQGGQASDRG--YLVRVGQEDVLF 588
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
+ G I+H +V G ++ VD RLGCM HT +HLLN ALR+ L
Sbjct: 589 PVPRAQVCGGFILHEAVAPEGLEV--GDQVQLHVDEAWRLGCMEKHTATHLLNWALRQTL 646
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
T Q+ + + D + L+ + + AVE + + + V +M L
Sbjct: 647 GPGTEQRGSHLNPERLRFDVATQA-PLTPEQLRAVEGTVQEAVGQDEAV---YMEEVALA 702
Query: 723 FLTHLTVIPG-----EIYPDDVIL----------IDISDKENV-ISREPCCGTHVFNTGH 766
H +PG E+YPD V + +D++ + + S E CCGTH+ TG
Sbjct: 703 RTAH---VPGLRSLDEVYPDPVRVVSVGVPVAEALDLASQAALQTSVELCCGTHLLRTGA 759
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
I ++G + + G + +TG+ ++ A E G+ L+
Sbjct: 760 IGDLVIVGERQLSRGTTRLLAVTGEQAQQAREVGQALA 797
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 75/107 (70%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RVANSQKC+R GG+HNDL GRD
Sbjct: 66 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +ACRMA E LT+ +P DRL+ ++
Sbjct: 126 SHHTFFEMLGNWAFGGEYFKEEACRMAWELLTQ-VYGIPEDRLWVSY 171
>gi|146421805|ref|XP_001486846.1| hypothetical protein PGUG_00223 [Meyerozyma guilliermondii ATCC
6260]
gi|146387967|gb|EDK36125.1| hypothetical protein PGUG_00223 [Meyerozyma guilliermondii ATCC
6260]
Length = 964
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 283/847 (33%), Positives = 423/847 (49%), Gaps = 94/847 (11%)
Query: 2 NNPNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVF 61
+N + +S + + +RS+FLDYF GH V SS +VP+ D ++ F N+GM Q+K +F
Sbjct: 10 HNMSTNSPIIWPASKVRSTFLDYFKEKHGHQFVPSSSVVPHNDPTLLFANAGMNQYKPIF 69
Query: 62 LG-LTPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRD 116
LG + PA + R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++
Sbjct: 70 LGTVDPASEMSTWKRAVNSQKCIRAGGKHNDLEDVGQDSYHHTFFEMLGNWSFGDYFKKE 129
Query: 117 ACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMK 176
A A E LT L DRLY TYF G ++ GL D E + WL+ GV DHI K
Sbjct: 130 AIEWAWELLTDV-YKLDPDRLYVTYFEGDEKLGLGPDLEAKQFWLDRGVAEDHILTGDAK 188
Query: 177 CNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIV 236
NFWEMG GPCG SEIHYD G ++A VN D +++EIWN+VF+ + R ++
Sbjct: 189 DNFWEMGDQGPCGPCSEIHYDRIGNRNAA-HLVNMDDPNVLEIWNLVFMQYNREPDSSLR 247
Query: 237 PLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL 296
PL +IDTGLGFERLV+ILQ K+S YDTD+F P+ + I ++SG +PY F + ++ +
Sbjct: 248 PLPAKHIDTGLGFERLVSILQQKSSNYDTDVFQPIFDKIREISGVRPYTGKFGSEDKDGI 307
Query: 297 DTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELS 353
DT+YR+++D+ R +T A+ D P+ + LR ++R G ++L
Sbjct: 308 DTAYRVIADHVRTLTFAITDGGVPNNEGRGYVLRRILRRGARYVRKYLNCPIGSFFQQLV 367
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+ E +++PEI ++ ++ IL EE F K L + + EQ+ I+
Sbjct: 368 PVVIEQNSEIFPEILRNMQDLKEILNEEELSFA----------KTLDRGEKLFEQYAII- 416
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
++ P T +SG + LYDTYG ++ + +AA L + E FE
Sbjct: 417 --------------ASKTPEQT-LSGKDVWRLYDTYGFPVDLTRLMAAEAGLKIDEEGFE 461
Query: 474 QKLNELKERSKA---KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTF 524
+ E E SKA K +S + +D+ L P T+D YK Y
Sbjct: 462 KARLESWEASKASSNKGSSQLVKLDVHALSELDSNANIPKTNDSYK-----------YGL 510
Query: 525 PCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQ 584
+ +VGI G +DS+ E VG++ DKT+ YA GGQ
Sbjct: 511 DDVKAEVVGIYDGSSF----------------VDSVS-EVGQQVGILLDKTSFYAEQGGQ 553
Query: 585 IDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRL 643
D G + + + E+ + G ++H G++V + KV + + D R
Sbjct: 554 EYDKGKIVIDGSAE----FEVDNVQVYGGYVLHTGSIVYGTLKVKDEVLAC--YDELRRW 607
Query: 644 GCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN 702
HT +H+LN ALR VL QK V ++ DFS + + L+ + VE N
Sbjct: 608 PIRNNHTGTHVLNFALREVLGDGVDQKGSLVAPEKLRFDFS-HKQGLTPAELTKVEAISN 666
Query: 703 DVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPD------------DVILIDISDKENV 750
I++ +V + + ++ + L + GE YPD D++ D+ +
Sbjct: 667 KYISDNKEVFAKDVPLADAQQINGLRAVFGETYPDPVRVVSVGVPVEDLLKDPKRDEWHQ 726
Query: 751 ISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFS 810
+S E C GTHV TG I+ +I G+R I +TG + + K + S +
Sbjct: 727 VSVEFCGGTHVAKTGEIKDLVIIEESGIAKGIRRIVAVTGTEAHRVQKLAKDYDSQLSEA 786
Query: 811 QILNVGN 817
+ + G+
Sbjct: 787 EAMPFGS 793
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + PA + R NSQKCIR GGKHNDL G+D
Sbjct: 48 VPHNDPTLLFANAGMNQYKPIFLGTVDPASEMSTWKRAVNSQKCIRAGGKHNDLEDVGQD 107
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A A E LT L DRLY T+
Sbjct: 108 SYHHTFFEMLGNWSFGDYFKKEAIEWAWELLTD-VYKLDPDRLYVTY 153
>gi|198437569|ref|XP_002125465.1| PREDICTED: similar to alanyl-tRNA synthetase [Ciona intestinalis]
Length = 967
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 273/831 (32%), Positives = 416/831 (50%), Gaps = 90/831 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L SK +R FL +F HT + SS +P D ++ F N+GM QFK++FLG P
Sbjct: 5 LNSKQLRQMFLSFFQEKYAHTYIHSSSTIPLDDPTLLFANAGMNQFKSIFLGTISPADPL 64
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
RV NSQKC+R GGKHNDL G+D+YHHTFFEMLG WSF DY+K+DA A E LT
Sbjct: 65 SKCKRVVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGCWSFGDYFKKDAINWAWELLT 124
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ + +P DRLY TYF GS++Y +P D E +++WL+ +P DHI MK NFWEMG G
Sbjct: 125 EV-LKIPKDRLYATYFEGSEEYNVPVDTEVQNLWLQ-HLPADHILPGNMKDNFWEMGDVG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG +EIH+D G ++A VN D +++E+WN+VF+ R + L+K ++DTG
Sbjct: 183 PCGPCTEIHFDRIGGRNAA-HLVNMDDPEVLEVWNLVFMQFNREKDGKLKLLAKQHVDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV+++Q K S YDTD+F PL + I+ +GA+ Y + +D +YR+L+D+
Sbjct: 242 MGLERLVSVIQGKLSNYDTDMFTPLFKAIQLGTGAREYQGKVGKDDVDGVDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R +T+AL+D PD + LR ++R A + + K + L + + +ILG+
Sbjct: 302 IRTLTIALSDGGRPDNVGRGYVLRRILRRATRFAVEKLNAKP-RFFSSLVHVVVDILGEA 360
Query: 364 YPE-IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE I+D I +I EE + L + G K
Sbjct: 361 FPEIIRDPQMVIDIIDEEEEQFLKTLNR-----------------------------GRK 391
Query: 423 YLTKQL-ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
L +++ + D G+ A+ LYDTYG ++ + +A LT+ E+FE+ + +
Sbjct: 392 ILNQKIKSLDADAKVFPGETAWLLYDTYGFPFDLTEIMAEESGLTVDCESFEKAKAQARI 451
Query: 482 RSKAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
SK A +V D +D+ K FP TDD +KY Y + N + Y+FP T +V
Sbjct: 452 TSKG-FAQDVADTICLDVHMLTDLKEKKFPPTDDSFKYQYSSNDNGE-YSFPAC-TGVVK 508
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
++ ++ F + SGA G++ DKT YA GGQ+ D+G Y
Sbjct: 509 AILQNKTF------VTSVSSGAE-----------CGILLDKTCFYAEQGGQLFDLG--YF 549
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
E + + G ++H G V + +V G + + +D + R M+ H+ +H
Sbjct: 550 KKQEDEFTEFTVKNCQVQGGYVLHVGTVAGTLEV--GDSVELFIDEQRRQSLMKNHSCTH 607
Query: 654 LLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
+LN LR VL Q+ V + DF+ + ++ V E N ++ +
Sbjct: 608 ILNFGLRCVLGEADQRGSLVAPNRLRFDFTAK-KAMTSQQVKETEDVCNQIVNKDEVIYA 666
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDIS------------DKENVISREPCCGTHV 761
+ + + + L I E YPD V ++ + D S E C GTH+
Sbjct: 667 KPVPLDQAKAIHGLRAIFDETYPDPVRVLSVGVSVDSLVADPNFDAAMNTSVELCGGTHL 726
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQI 812
+GH + +I ++ + GVR I +TG + A L A SF I
Sbjct: 727 LRSGHADKFIIISEEAISKGVRRIVAVTGQEALKAERKANLL--AKSFETI 775
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK++FLG P RV NSQKCIR GGKHNDL G+D
Sbjct: 33 IPLDDPTLLFANAGMNQFKSIFLGTISPADPLSKCKRVVNSQKCIRAGGKHNDLDDVGKD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLG WSF DY+K+DA A E LT+ + +P DRLY T+
Sbjct: 93 TYHHTFFEMLGCWSFGDYFKKDAINWAWELLTE-VLKIPKDRLYATY 138
>gi|308485186|ref|XP_003104792.1| CRE-AARS-2 protein [Caenorhabditis remanei]
gi|308257490|gb|EFP01443.1| CRE-AARS-2 protein [Caenorhabditis remanei]
Length = 966
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 275/823 (33%), Positives = 412/823 (50%), Gaps = 86/823 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L + +RS+F+++F + HT V SS ++P+ D ++ F N+GM QFK +FLG+
Sbjct: 4 LTASEVRSTFINFFKEKKEHTYVHSSSVIPHDDPTLLFANAGMNQFKPLFLGIADPNSDL 63
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A R N+QKC+R GGKHNDL G+D YHHT+FEMLGNWSF DY+K++ A E LT
Sbjct: 64 AKLKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGNWSFGDYFKKEIITWAWELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+P +RLY + FGG + G+P D E R+IW +GVP + I GMK NFWEMG G
Sbjct: 124 -TVYGIPSERLYVSVFGGDEATGVPADSEAREIWRSVGVPDERILNFGMKDNFWEMGDVG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G A VNAD ++EIWN+VFI R ++ L +ID G
Sbjct: 183 PCGPCSEIHYDRIGN-RDASHLVNADDPMVVEIWNLVFIQFNREEGGSLKTLPAKHIDCG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LG ERL+ ++Q+KTS YDTD+F P+ + I K SG + Y ++ +D +YR+++D+
Sbjct: 242 LGLERLIAVMQDKTSNYDTDIFQPIFQAINKGSGVRAYTGHIGDDDKDGIDMAYRVVADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R +T+AL+D PD + + LR ++R + + + + G L + ILG+
Sbjct: 302 IRTLTIALSDGGRPDNSGRGYVLRRILRRGVRYATEKLNAQPG-FFASLVPVVISILGET 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE+ + I+ +E + F +KT L G
Sbjct: 361 FPELSRDPETVMDIINDEEKQF--------------LKT--------------LSRGRVL 392
Query: 424 LTKQLARDPSITE-ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+ + P+ T+ GD+A+ LYDTYG ++ Q +A K L++ AFE+ + E
Sbjct: 393 FQRAVDSLPAGTKTFPGDVAWRLYDTYGFPADLTQLMAEEKGLSVDLTAFEEARKKAIET 452
Query: 483 SKAKAAS--NVPDID---LMDL--KHFPVTDD--KYKYDYHYDTNSKRYTF-PCLDTNLV 532
S A + D+D L DL K P TDD KY Y + + Y F PC V
Sbjct: 453 SSAGTGKFRDTLDLDVHALADLQQKGVPTTDDTPKYAYSFTGEGADAVYKFEPC-----V 507
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
G ++ AIR R G +D + ++ D+TN YA GGQI D+GV
Sbjct: 508 GKIL----------AIR--RDGKFVDELVAGEEG--AILLDRTNFYAEQGGQIYDVGV-- 551
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
LT E+ + + G IV G+ +FK+ + R + D + + M+ HT +
Sbjct: 552 LTKVNDESNEFNVSNCQVRGGYIVLVGSSEGNFKIGDDVNQRFDEDRKQLI--MKNHTGT 609
Query: 653 HLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
H+LN ALR+VL + QK V D DF+ ++ + V E+Y +I + QV
Sbjct: 610 HVLNYALRKVLADSDQKGSLVAPDRMRFDFTNKA-AMTSEQVKQAEEYAQQLINTKGQVY 668
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTH 760
++ ++ + L + E YPD V ++ + + + P C GTH
Sbjct: 669 AKNSPLADAKKINGLRAMFDETYPDPVRVVAVGTSVEQLLQNPDAPEGQNTTVEFCGGTH 728
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ N HI + ++ G+R I LTG + A+ L
Sbjct: 729 LQNVSHIGRIVISSEEAIAKGIRRIVALTGPEADRAIARADRL 771
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 69/106 (65%), Gaps = 6/106 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG+ A R N+QKCIR GGKHNDL G+D
Sbjct: 32 IPHDDPTLLFANAGMNQFKPLFLGIADPNSDLAKLKRAVNTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
YHHT+FEMLGNWSF DY+K++ A E LT +P +RLY +
Sbjct: 92 VYHHTYFEMLGNWSFGDYFKKEIITWAWELLT-TVYGIPSERLYVS 136
>gi|242012157|ref|XP_002426803.1| Alanyl-tRNA synthetase, putative [Pediculus humanus corporis]
gi|212510999|gb|EEB14065.1| Alanyl-tRNA synthetase, putative [Pediculus humanus corporis]
Length = 983
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 282/819 (34%), Positives = 409/819 (49%), Gaps = 88/819 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L SK +R +F+D+F + H V SS +P D ++ F N+GM QFK +FLG
Sbjct: 4 LSSKEVRQTFIDFFIKKKQHQYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSDM 63
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A + RV N+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A E LT
Sbjct: 64 AKWVRVVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICAWAWELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
P DRLY TYFGG GL D E + IW++LGVP H+ MK NFWEMG TG
Sbjct: 124 TVYHISP-DRLYVTYFGGDSASGLEPDSECKKIWIDLGVPESHVLPGNMKDNFWEMGETG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+HYD G +A VN D D++EIWN+VFI R + ++ L K +ID G
Sbjct: 183 PCGPCSELHYDRIGN-RNASHLVNQDDPDVLEIWNLVFIQFNRETDGSLKTLPKRHIDCG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++QNK S YDTD+F PL + I+K +G+ PY + +D +YR+L+D+
Sbjct: 242 MGFERLVSVIQNKRSNYDTDIFTPLFDAIQKGTGSPPYKGKVGAEDVDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVK----QGKLVKELSYNIAEILGD 362
+R +T+ALAD PD R V +L + + + K L + + LGD
Sbjct: 302 ARTLTIALADGGRPDNVG--RGYVLRRILRRAIRYGTEKLNTKPKFFSSLVKTVCDTLGD 359
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+ EI+ R D + + +E + +KT L G
Sbjct: 360 TFSEIR--------------RDPDTIMEIINEEEEQFLKT--------------LSRGRN 391
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L + +A+ + GD+A+ LYDTYG ++ Q +A K L++ +E+ + +
Sbjct: 392 LLNRTIAKIGKSKVLPGDVAWRLYDTYGFPVDLTQLMAEEKGLSVDMTGYEEARKQAQLL 451
Query: 483 SKAKA-------ASNVPDI-DLMDLKHFPVTDDKYKYDYHYDTNSK--RYTFPCLDTNLV 532
S+ K A +V I +L +LK P TDD KY+Y K Y F + +
Sbjct: 452 SQGKEGKVDDGIALDVHAITELQNLK-IPPTDDSPKYNYKAKQQDKNAEYEFQKCEAKIT 510
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
AIRH + +DSI G++ D+T YA GGQI D G Y
Sbjct: 511 --------------AIRHKKK--FVDSINSGEKC--GILLDRTLFYAEQGGQIFDEG--Y 550
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+ EN + I + G ++HFG FK G T + +D R M HT +
Sbjct: 551 MIKKNDENVEFSIYNVQVKAGYVLHFGTTEGVFK--KGDTVVLHLDTARRRLVMNNHTGT 608
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
H+LN ALR VL + QK V D DF+ ++ D + A E + VIA +V
Sbjct: 609 HILNFALREVLGSGCEQKGSLVAPDRLRFDFT-NKSAMTPDQIKAAEDSVKRVIAKNCEV 667
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDK-ENVISR-----------EPCCGT 759
++ + + + + E YPD V ++ + E++++ E C GT
Sbjct: 668 FAKNTPLAVAKTVNGVRAMFDEHYPDPVRIVSVGAAVEDLVANPSSSLGMSVPAEFCGGT 727
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
H+ +GH+ + ++ G+R I LTG + A++
Sbjct: 728 HLHRSGHVGDFVISSEEAIAKGIRRIVALTGPEASKALK 766
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG A + RV N+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLGTADPNSDMAKWVRVVNTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A E LT P DRLY T+
Sbjct: 92 VYHHTFFEMLGNWSFGDYFKKEICAWAWELLTTVYHISP-DRLYVTY 137
>gi|302681375|ref|XP_003030369.1| hypothetical protein SCHCODRAFT_82606 [Schizophyllum commune H4-8]
gi|300104060|gb|EFI95466.1| hypothetical protein SCHCODRAFT_82606 [Schizophyllum commune H4-8]
Length = 949
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 276/809 (34%), Positives = 405/809 (50%), Gaps = 81/809 (10%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPY--- 69
S+ +R F DYF ++GHT V+SSP VPY D ++ F N+GM QFK +FLG T P+
Sbjct: 8 SSRQVRQDFFDYF-QSKGHTFVRSSPTVPYDDPTLLFANAGMNQFKPLFLG-TVDPHSDL 65
Query: 70 ---PRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + E LT
Sbjct: 66 SKLKRAYNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIAYSWELLT 125
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ LP DRLY +YF G + GL D E + WL++GVP DHI K NFWEMG+TG
Sbjct: 126 EV-YKLPKDRLYVSYFEGDPKNGLEPDLEAKQYWLDIGVPEDHILPGNAKDNFWEMGATG 184
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G ++A VN D D++EIWN VFI R ++ PL ++DTG
Sbjct: 185 PCGPCSEIHYDRIGGRNAAHL-VNQDDPDVLEIWNNVFIQFNREDDGSLKPLPSKHVDTG 243
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++Q+K S YDTD+F P+ + +++++G +PY F ++ +DT+YR+++D+
Sbjct: 244 MGFERLVSVVQDKRSNYDTDVFSPIFQRVQELTGVRPYQGLFGPDDKDGIDTAYRVVADH 303
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R +T AL+D P+ + LR ++R + V G L + E +GDV
Sbjct: 304 VRTLTFALSDGGVPNNVGRGYVLRRILRRGARYARKKLGVTIGSFFSSLMPVVVEHMGDV 363
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PEI + +I+ IL EE F + L + + +Q+
Sbjct: 364 FPEITKKLPEIKEILDEEEESFA----------RTLDRGEKLFDQY-------------- 399
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
+ A++ ++ E++G + LYDTYG ++ +A L + + FE KE S
Sbjct: 400 --AKRAKEQNLKELNGKDVWRLYDTYGFPVDLTTLMAEELGLGINEKEFEDAQAWSKEAS 457
Query: 484 KA---KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
KA K A+ V +D+ D+ D K D +S +Y + T V + ++
Sbjct: 458 KATQNKDAATVVKLDVHDIAALEKGGDVAKTD-----DSSKYNQGNI-TATVKKIFHNKA 511
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
F I A S G+I D+TN YA +GGQ +D G + +
Sbjct: 512 FLDSTSDIPEATS--------------FGIILDRTNFYAESGGQENDTGGIVIDGVAE-- 555
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
E+ ++ G ++H G++ + G D R HT +H+LN LR
Sbjct: 556 --FEVTDVQVYNGYVLHVGHLKYG-DLEVGNEVVASYDELRRWPLRNNHTATHILNYCLR 612
Query: 661 RVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
VL QK V + DFS + + + + +E D I V+V + M
Sbjct: 613 EVLGDHIDQKGSLVAPTKLRFDFS-HKAQIPLPELTQIESMSVDWIKKNVKVYGKDMDLK 671
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDI--------SDKENVISR----EPCCGTHVFNTGHI 767
+ L + GE YPD V ++ + +D EN R E C GTHV TG I
Sbjct: 672 SAQKIPGLRAVFGETYPDPVRVVSLEFSVDEISADIENPKWRSTSIEFCGGTHVAKTGDI 731
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
+ + G+R I +TG + A
Sbjct: 732 KHFVITEESGIAKGIRRIVAVTGHEAAEA 760
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 74/108 (68%), Gaps = 8/108 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPY------PRVANSQKCIRVGGKHNDLSFAGR 871
+PY D ++ F N+GM QFK +FLG T P+ R NSQKCIR GGKHNDL G+
Sbjct: 34 VPYDDPTLLFANAGMNQFKPLFLG-TVDPHSDLSKLKRAYNSQKCIRAGGKHNDLDDVGK 92
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
DSYHHTFFEMLGNWSF DY+K++A + E LT+ LP DRLY ++
Sbjct: 93 DSYHHTFFEMLGNWSFGDYFKKEAIAYSWELLTE-VYKLPKDRLYVSY 139
>gi|327262296|ref|XP_003215961.1| PREDICTED: alanyl-tRNA synthetase, mitochondrial-like [Anolis
carolinensis]
Length = 988
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 286/827 (34%), Positives = 417/827 (50%), Gaps = 101/827 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAP--- 68
L S +R SF+ +F GH +V SSP+ P D + FVN+GM QFK +FLG T P
Sbjct: 35 LSSARVRQSFIRFFQEKYGHQVVASSPVRPRADPGLLFVNAGMNQFKPIFLG-TADPRSE 93
Query: 69 ---YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
Y RV NSQKCVR GGKHNDL GRD YHHTFFEMLGNWSF DY+K +AC+MA E L
Sbjct: 94 MTRYRRVVNSQKCVRAGGKHNDLEDVGRDVYHHTFFEMLGNWSFGDYFKEEACKMAWELL 153
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
T+ +P D LY TYFGG+ GL DEETR+IWL G+ H+ MK NFWEMG +
Sbjct: 154 TEV-YEIPKDHLYVTYFGGNAALGLSADEETREIWLNQGLSPSHVLPFEMKDNFWEMGDS 212
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG +EIHYD G +A A VN D++EIWN+VF+ + R + + L ++++DT
Sbjct: 213 GPCGPCTEIHYDHIGGGRNAAAMVNKGNPDVVEIWNLVFMQYNREADGRLHQLPQHHVDT 272
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ERL+TILQNK S YDTDLF P+L+ I K G Y ++ ++ +YR+++D
Sbjct: 273 GMGLERLMTILQNKRSNYDTDLFTPILDAIHKGCGGPNYQGLVGEADAGGVNMAYRVVAD 332
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R +++ +AD ++P + LR+++R A+ +V G L L + EILGD
Sbjct: 333 HVRTLSICIADGVYPGMSGAELVLRHILRRAVRFCSEVLHAPPGFLAN-LVPVVVEILGD 391
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ +K+ I+ E F + L+ G
Sbjct: 392 AYPELHRDTDKVMNIISENEAAFLS----------------------------SLMQGRH 423
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE---QKLNEL 479
+ + L + ++A++LY G ++I + K + L A + Q+ E
Sbjct: 424 VINRALQQMDHSKVFPVEIAWSLYSNLGFPLDLIALMLEEKGVQLDKAALDCLAQEDAER 483
Query: 480 KERSKAKAASNVPDIDLMDLKHF-----PVTDDKYKYDYHYDTNSKRYTFP-CLDTNLVG 533
K RS+ + ++ + +D+ L P TDD +KY Y + RY F C T L+
Sbjct: 484 KARSQQEQSARML-LDVHSLAQLRRDGVPSTDDSFKYAYEIGKDG-RYVFKQCKATVLML 541
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
G +++ SG G++ D+T YA GGQ D G Y+
Sbjct: 542 YKDG---------SLQKEVSGG---------GQRCGVLLDQTCFYAEQGGQAPDQG--YM 581
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
Q++ + + G ++H V++S + G ++ VD R+ CM HT +H
Sbjct: 582 VCGGQQDTFFPVVSVQVSAGYVIH--EVIASEALKAGDQVQLFVDEAHRMACMVNHTATH 639
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGET-LSVDSVAAVEKYINDVI-ANQVQ 710
LLN LR+VL T Q V ++ L F V + + + + VE I ++I N+V
Sbjct: 640 LLNFVLRQVLGESTEQCGSHVTAEH--LRFDVRTQVPVKTEHLQEVENVIQEIIKKNEV- 696
Query: 711 VDRRHMRASELPFLTHLTVIPG-----EIYPDDV-----------ILIDISDKENVISRE 754
+ E+P L + I G ++YPD V L+ S S E
Sbjct: 697 -----VCTEEVP-LKLTSDIQGLRKLDDVYPDVVRVVSVGVPVKRALVRESKDAMHTSVE 750
Query: 755 PCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGK 801
CCGTH+ TG I+ T+I + G+ I LTG+ +K A E+G+
Sbjct: 751 LCCGTHLLRTGAIQDFTIISERQLVKGISHIIALTGEQAKKAREDGR 797
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 73/107 (68%), Gaps = 8/107 (7%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTPAP------YPRVANSQKCIRVGGKHNDLSFAGRD 872
P D + FVN+GM QFK +FLG T P Y RV NSQKC+R GGKHNDL GRD
Sbjct: 64 PRADPGLLFVNAGMNQFKPIFLG-TADPRSEMTRYRRVVNSQKCVRAGGKHNDLEDVGRD 122
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K +AC+MA E LT+ +P D LY T+
Sbjct: 123 VYHHTFFEMLGNWSFGDYFKEEACKMAWELLTE-VYEIPKDHLYVTY 168
>gi|225423779|ref|XP_002277341.1| PREDICTED: alanyl-tRNA synthetase-like [Vitis vinifera]
Length = 1002
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 276/828 (33%), Positives = 421/828 (50%), Gaps = 102/828 (12%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP- 66
S V + +R +F+++F ++ H KSSP+VP D ++ F N+GM QFK +FLG
Sbjct: 54 SEVEWPANKVRDTFINFF-ESKNHVDWKSSPVVPVNDPTLLFANAGMNQFKPIFLGTADP 112
Query: 67 ----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMAL 122
+ R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A A
Sbjct: 113 NTALSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEWAW 172
Query: 123 EFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEM 182
E LTK LP DR+Y TYFGG ++ GL D E RD+WL+ +P H+ G K NFWEM
Sbjct: 173 ELLTKV-YKLPTDRIYATYFGGDEKSGLSPDTEARDMWLKF-LPPGHVLPFGCKDNFWEM 230
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
G TGPCG +EIH+D G +A + VN D IEIWN+VFI R S ++ L +
Sbjct: 231 GDTGPCGPCTEIHFDRIGNRDAA-SLVNNDDPTCIEIWNLVFIQFNRESDGSLKSLPAKH 289
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRM 302
+DTG+GFERL +ILQ K S YDTD+FLP+ + I++ +GA+PY + + +D +YR+
Sbjct: 290 VDTGMGFERLTSILQGKMSNYDTDVFLPIFDAIQQATGARPYSGKVGSDDADKVDMAYRV 349
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI 359
++D+ R ++ A+AD P + LR ++R A+ +V K ++G + ++
Sbjct: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQEG-FFNSFVNIVVKV 408
Query: 360 LGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
+GDV+PE++ I+ I+ EE F K L+K +E+F
Sbjct: 409 MGDVFPELKQREVHIREIIAEEEASFG----------KTLLKG---IEKF---------- 445
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
K+ A++ ++G AF L+DTYG ++ Q +A + L + + F L+E
Sbjct: 446 ------KKAAQEVQGKILNGQDAFVLWDTYGFPLDLTQLMAEERGLIVDVQGFNAALDEA 499
Query: 480 KERS-----KAKAASNVPDIDLMDLKH---FPVTDDKYKYDYHYDTNSKRYTFPCLDTNL 531
+ERS K + V D D H TDD +K+ + D S
Sbjct: 500 RERSRSAQNKQAGGTIVMDADATSALHKRGVAPTDDSFKFTWFQDHGS------------ 547
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
I+ SG+ N VG++ + T+ YA GGQI D G
Sbjct: 548 ---------------VIKAIYSGSEFLESASAGNE-VGIVLETTSFYAEQGGQIFDTG-- 589
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHFGNVVSS---FKVTPGLTSRVEVDARMRLGCMRA 648
L T+ G ++ + G I+H G+ + F V + +V+ D R +
Sbjct: 590 SLEGTS---GSFQVCNVQIYGGFILHIGSFTEASGRFSVGDKVICKVDYDRRKVIAP--N 644
Query: 649 HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
HT +H+LN ALR VL QK V ++ DFS +G+ + D + +E +N+ I
Sbjct: 645 HTCTHMLNFALREVLGNHVDQKGSIVLPEKLRFDFS-HGKPVHPDHLRKIESIVNEQIDA 703
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDK-ENV-----------ISREP 755
++ V + ++ + L + GE+YPD V ++ I K E++ IS E
Sbjct: 704 ELDVFSKDASLADAKSINGLRAVFGEVYPDPVRVVSIGQKVEDLLADPGNEKWLSISAEL 763
Query: 756 CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
C GTH+ NT ++ ++ + G+R I +T D + A+E + L
Sbjct: 764 CGGTHISNTREAKAFALLSEEGIAKGIRRITAVTTDVAFKAIELARSL 811
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK +FLG + R N+QKCIR GGKHNDL G+D
Sbjct: 85 VPVNDPTLLFANAGMNQFKPIFLGTADPNTALSKLTRACNTQKCIRAGGKHNDLDDVGKD 144
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A A E LTK LP DR+Y T+
Sbjct: 145 TYHHTFFEMLGNWSFGDYFKKEAIEWAWELLTK-VYKLPTDRIYATY 190
>gi|150864558|ref|XP_001383420.2| Alanyl-tRNA synthetase, cytoplasmic (Alanine--tRNA ligase) (AlaRS)
[Scheffersomyces stipitis CBS 6054]
gi|149385814|gb|ABN65391.2| Alanyl-tRNA synthetase, cytoplasmic (Alanine--tRNA ligase) (AlaRS)
[Scheffersomyces stipitis CBS 6054]
Length = 954
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 283/834 (33%), Positives = 417/834 (50%), Gaps = 87/834 (10%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
+ +RS+FLDYF N + H V SS +VP+ D ++ F N+GM Q+K +FLG A
Sbjct: 10 TASKVRSTFLDYFTNKRDHKFVPSSSVVPHNDPTLLFANAGMNQYKPIFLGTADPASDLA 69
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
R ANSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K +A A E LT+
Sbjct: 70 SLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKPEAITWAWELLTE 129
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
L DRLY TYF G + GL D E + WL++GV DHI K NFWEMG GP
Sbjct: 130 V-YGLDKDRLYVTYFEGDAKQGLEPDLEAKSFWLKVGVAEDHILPGNAKDNFWEMGDQGP 188
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIHYD G ++A + VN D +++E+WNIVFI + R + ++ L +IDTG+
Sbjct: 189 CGPCSEIHYDRIGGRNAA-SLVNQDDPNVLEVWNIVFIQYNREADSSLKTLPAKHIDTGM 247
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV++LQ+K+S YDTD+FLP+ + I ++G +PYG F + +DT+YR+++D+
Sbjct: 248 GFERLVSVLQDKSSNYDTDVFLPIFDKIRDITGIRPYGGKFGAEDTDGIDTAYRVIADHV 307
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T A+ D P+ A LR ++R G ++L + E +++
Sbjct: 308 RTLTFAICDGGVPNNDGAGYVLRRILRRGSRYVRKYMNYPIGSFFQQLVDVVIEQNKEIF 367
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI ++ IL EE F K L + + EQ+ I+
Sbjct: 368 PEIVHGAQDLKEILNEEELSFA----------KTLDRGEKLFEQYAII------------ 405
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
++ P T +SG + LYDTYG ++ + +A L + AFE+ E KE S
Sbjct: 406 ---ASKTPEQT-LSGKDVWRLYDTYGFPSDLTRLMAEEAGLKIDEPAFEKARLESKEAS- 460
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
KA N ++L+ L +++ + +S +Y + + I
Sbjct: 461 -KAIGNKDGVELVKLDVHSLSELDSNANVSKTDDSAKYGRENIKATIQAIY--------- 510
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
S +DSI + + G++ DKT YA GGQI D G + +GK E
Sbjct: 511 -------SSSGFVDSID-DSSVQYGVLLDKTPFYAEQGGQIYDTGKLVI------DGKAE 556
Query: 605 --IGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+ + G ++H GN+V S V + + D R HT +H+LN ALR
Sbjct: 557 FNVTNVQVYGGYVLHTGNIVEGSLNVKDDVIAT--YDELRRWPIRNNHTGTHVLNYALRE 614
Query: 662 VLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL + Q+ V ++ DFS + + L+ +AAVE N+ I + +V + + +E
Sbjct: 615 VLGDSVDQRGSLVAPEKLRFDFS-HKQALTPKELAAVESISNEYIKSNKEVFYKDVSLNE 673
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFNTGHIE 768
+ L + GE YPD V ++ I + EP C GTHV TG I+
Sbjct: 674 AREINGLRAVFGETYPDPVRVVSIGVPVEDLLAEPKKADWHKVSIEFCGGTHVAKTGDIK 733
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASF-SQILNVGNIPYG 821
VI G+R I +TG + A + A+ F +++ + +P+G
Sbjct: 734 DLVVIEESGIAKGIRRIVAVTGHDAHAVQK------IASEFEAELDHAAGLPFG 781
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG A R ANSQKCIR GGKHNDL GRD
Sbjct: 37 VPHNDPTLLFANAGMNQYKPIFLGTADPASDLASLKRAANSQKCIRAGGKHNDLEDVGRD 96
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K +A A E LT+ L DRLY T+
Sbjct: 97 SYHHTFFEMLGNWSFGDYFKPEAITWAWELLTE-VYGLDKDRLYVTY 142
>gi|148691494|gb|EDL23441.1| alanyl-tRNA synthetase like [Mus musculus]
Length = 984
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 274/820 (33%), Positives = 414/820 (50%), Gaps = 90/820 (10%)
Query: 16 SIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYP 70
++R +FL +F + GH LV S+ + P GD S+ FVN+GM QFK +FLG A +
Sbjct: 36 AVRDAFLSFFRDRHGHRLVPSATVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFR 95
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPP 129
RV NSQKCVR GG+HNDL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+
Sbjct: 96 RVVNSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-V 154
Query: 130 VSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
+P DRL+ +YF G Q GL D ETRDIWL LGVP + G + NFWEMG TGPCG
Sbjct: 155 YGIPEDRLWVSYFSGDSQTGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCG 214
Query: 190 YSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
+EIHYD+ G S L+E+WN+VF+ H R + ++ L + ++DTG+G
Sbjct: 215 PCTEIHYDLAGGVGSP---------QLVELWNLVFMQHYREADGSLQLLPQRHVDTGMGL 265
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERLV +LQ K STYDTDLF PLL+ I + GA PY ++ +DT+YR+++D+ R
Sbjct: 266 ERLVAVLQGKRSTYDTDLFSPLLDAIHQSCGAPPYSGRVGAADEGRIDTAYRVVADHIRT 325
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
++V +AD + P + LR ++R A+ S +V + G + L + E LG YPE
Sbjct: 326 LSVCIADGVSPGMSGAPLVLRRILRRAVRYSTEVLQAPPG-FLGSLVPVVVETLGSAYPE 384
Query: 367 IQDSINKI-----QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
++ + K+ L+ +E+ +L++ + + +T L ++ P V
Sbjct: 385 LEKNSVKVLIEIASLVSEDEAAFLASLQRGR----RIIDRTVKRLGPSDLF--PAEVAWS 438
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
L+ L + E+ + DT GL + L + + + + +
Sbjct: 439 LSLSGNLGIPLDLVELMLEEKGVKLDTAGLEQ-------------LAQKEAQHRAQQAEA 485
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
+ + +V ++ + + P TDD KY+Y N Y F + ++ +
Sbjct: 486 DQEDRLCLDVHALEELHRQGIPTTDDSPKYNYTLHPNGD-YEFGLCEARVLQL------- 537
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
++ +G ++ S+ GL+ D+TN YA GGQ D G YL T Q++
Sbjct: 538 --------YSETGTAVASVGAGQR--CGLLLDRTNFYAEQGGQASDRG--YLVRTGQQDM 585
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+ G I+H +V G ++ VD R+GCM HT +HLL+ ALR+
Sbjct: 586 LFPVAGAQLCGGFILHEAMAPERLQV--GDQVQLYVDKAWRMGCMVKHTATHLLSWALRQ 643
Query: 662 VLTCTYQKSCRVFSDECALDFSVYGET-LSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
L T ++ + E L F V +T L+ + + VE Y+ +V+ + + E
Sbjct: 644 TLGPTTEQRGSHLNPE-RLRFDVATQTLLTTEQLRTVESYVQEVVGQD-----KPVFMEE 697
Query: 721 LPFLTHLTVIPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNT 764
+P L H IPG E+YPD V L S S E CCGTH+ +T
Sbjct: 698 VP-LAHTARIPGLRSLDEVYPDPVRVVSVGVPVAHALGPASQAAMHTSVELCCGTHLLST 756
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
G + +IG + G+ + +TG+ ++ A E G+ LS
Sbjct: 757 GAVGDLVIIGERQLVKGITRLLAITGEQAQQAREVGQSLS 796
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RV NSQKC+R GG+HNDL GRD
Sbjct: 61 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVVNSQKCVRAGGRHNDLEDVGRDL 120
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P DRL+ ++
Sbjct: 121 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPEDRLWVSY 166
>gi|334323954|ref|XP_001367753.2| PREDICTED: alanyl-tRNA synthetase, mitochondrial [Monodelphis
domestica]
Length = 989
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 278/822 (33%), Positives = 410/822 (49%), Gaps = 102/822 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
IR++FL +F + GH LV S+ ++P D + FVN+GM QFK +FLG A + R
Sbjct: 48 IRTAFLHFFRDRHGHQLVPSASVMPRSDPGLLFVNAGMNQFKPIFLGTVDPRSEMARFRR 107
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN-DYYKRDACRMALEFLTKPPV 130
VANSQKCVR GG+HNDL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT
Sbjct: 108 VANSQKCVRTGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTHI-Y 166
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+P DRL+ TYFGG+ GL D E+RDIWL LGVP + G NFWEMG GPCG
Sbjct: 167 EIPQDRLWVTYFGGNPPEGLAPDYESRDIWLSLGVPSSRVLSFGPSENFWEMGEIGPCGP 226
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
+EIHYD+ G L+E+WN+VF+ + R + ++ L + ++DTG+G E
Sbjct: 227 CTEIHYDLSG---------GVGPPQLVELWNLVFMQYNREADGSLQLLPQRHVDTGMGLE 277
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV +LQNK STYDTDLF PLL I++ A PY ++ D +YR+++D+ R +
Sbjct: 278 RLVAVLQNKRSTYDTDLFSPLLTAIQQGCRAPPYQGQVGKADGGHTDMAYRVVADHIRTL 337
Query: 311 TVALADNMFP---DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
++ +AD ++P A+ LR ++R A+ S +V + G + L + E LGD YPE+
Sbjct: 338 SICMADGVYPGMSGASLVLRQILRRAIRFSSEVLQAPPG-FLSSLVPIVVETLGDAYPEL 396
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
Q + +I ++ EE F + +E G + + +
Sbjct: 397 QKNTTQITSLVAEEETAF-----------------------LSSLER-----GRRVIDRT 428
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--------KLNEL 479
L + ++A++L GL +++ + K + L EQ + +
Sbjct: 429 LQQLGPSHLFPAEVAWSLSGNLGLPLDLVGLMLEEKGVQLDSAGLEQLAQEEAQHQAQQA 488
Query: 480 KERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
K KA+ ++ + + + P TDD KY+Y N Y F + ++ Q
Sbjct: 489 KPAKKAELRLDIHALSQLQRQGVPPTDDSSKYNYSLLPNGS-YEFGACEAEII------Q 541
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
++ +D GA+ DS+ GL+ DKTN YA GGQ D G YL Q+
Sbjct: 542 LYTLD---------GAATDSVGGGQRC--GLLLDKTNFYAEQGGQACDRG--YLICKGQQ 588
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+ + G I+H + + KV G ++ VD RLGCM+ HT +HLL+ AL
Sbjct: 589 DVLFPVIGAQIYGGFILHEVIALETLKV--GDQVQLHVDEEWRLGCMKKHTATHLLSWAL 646
Query: 660 RRVLTCTYQKSCRVFSDECALDFSVYG-ETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R+ L Q+ S E L F V L+ + + AVE+ I + V +M
Sbjct: 647 RQELGPNTQQCGSHLSPE-RLRFDVATLAPLTSEQLQAVEETIRVAVGQDKPV---YMAE 702
Query: 719 SELPFLTHLTVIPG-----EIYPDD-----------VILIDISDKENVISREPCCGTHVF 762
L T IPG E+YPD + L S S E CCGTH+
Sbjct: 703 VALELTTQ---IPGLRSLDEVYPDPVRVVSVGVPVAIALAPTSQAALQTSVELCCGTHLL 759
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
TG I T++G K + G+ + +TG+ ++ A + G++L+
Sbjct: 760 RTGAIGDLTIVGEKPLSKGIVRLVAVTGEQAQQARDVGQNLA 801
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 72/108 (66%), Gaps = 7/108 (6%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D + FVN+GM QFK +FLG A + RVANSQKC+R GG+HNDL GRD
Sbjct: 71 MPRSDPGLLFVNAGMNQFKPIFLGTVDPRSEMARFRRVANSQKCVRTGGRHNDLEDVGRD 130
Query: 873 SYHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT +P DRL+ T+
Sbjct: 131 LSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTH-IYEIPQDRLWVTY 177
>gi|297737260|emb|CBI26461.3| unnamed protein product [Vitis vinifera]
Length = 960
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 280/821 (34%), Positives = 414/821 (50%), Gaps = 105/821 (12%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP--- 70
+ +R +F+ +F + H SSP+VP D ++ F N+GM QFK +FLG P
Sbjct: 13 AAKVRDTFISFF-EAKEHVNWVSSPVVPLNDPTLLFANAGMNQFKPIFLGTADPNTPLSK 71
Query: 71 --RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+KR+A A E LT+
Sbjct: 72 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKREAIEWAWELLTEA 131
Query: 129 PVS----LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGS 184
+ LP DR Y TYFGG +Q GL D+E RDIWL+ +P H+ G K NFWEMG
Sbjct: 132 ICNKVYKLPTDRFYATYFGGDEQLGLAPDDEARDIWLKF-LPPGHVLPFGCKDNFWEMGD 190
Query: 185 TGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
TGPCG +EIH+D G A + VN D IEIWN+VFI R S ++ PL ++D
Sbjct: 191 TGPCGPCTEIHFDRIGN-RDATSLVNNDDPTCIEIWNLVFIQFNRESDGSLKPLPAKHVD 249
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
TG+GFERL +ILQNK S YDTD+FLP+ + I +GA Y T + +D +YR+++
Sbjct: 250 TGMGFERLTSILQNKMSNYDTDVFLPIFDAIHLATGAPLYSGKVGTEDVDKVDMAYRVVA 309
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D+ R ++ A+AD P + LR ++R A+ +V K ++G L + +++G
Sbjct: 310 DHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQEG-FFNGLVGVVVKVMG 368
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
DV+PE++ I+ I+ E F K L+K +E+F
Sbjct: 369 DVFPELKQHEMHIRGIIAAEEASFG----------KTLIKG---IEKF------------ 403
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
K+ A++ +SG AF L+DTYG ++ Q +A + LT+ F ++E +E
Sbjct: 404 ----KKAAQEVQGKILSGQEAFVLWDTYGFPLDLTQLMAEERGLTVDVMGFNIAMDEARE 459
Query: 482 RS-----KAKAASNVPDIDLMDLKH---FPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
RS K + V D D H TDD K+ + D S +
Sbjct: 460 RSRNAQNKKAGGAIVMDADATAALHKMGVAATDDISKFTWFEDHESV----------IKA 509
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
I G I S A+ D VG+I + T+ YA GGQI D G
Sbjct: 510 IYTG----------IEFLESAAAGDE--------VGIILETTSFYAEQGGQIFDTG---- 547
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNV---VSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ G ++ + G ++H G+V + F V + +V+ D R + HT
Sbjct: 548 -SLEGSCGSFQVCNVQIYGGFVLHIGSVTGEIGRFSVGDKVICKVDYDRRKLIA--PNHT 604
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H+LN ALR VL QK V ++ DFS +G+ + D + +E +ND I +++
Sbjct: 605 CTHMLNFALREVLGNHVDQKGSIVLPEKLRFDFS-HGKPIHPDHLRRIESIVNDQIKDEL 663
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKENV----ISREPCC 757
V + ++ + L + GE+YPD V ++ I +D +N +S E C
Sbjct: 664 DVYGKEATLADAKRINGLRAVFGEVYPDPVRVVTIGRKVEDLLADPDNAEWLSVSAELCG 723
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
GTH+ NT ++ ++ + G+R I +T DS+ A+E
Sbjct: 724 GTHISNTREAKAFALLSEEGIAKGIRRITAVTTDSAFKAME 764
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 71/111 (63%), Gaps = 9/111 (8%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK +FLG P R N+QKCIR GGKHNDL G+D
Sbjct: 38 VPLNDPTLLFANAGMNQFKPIFLGTADPNTPLSKLTRACNTQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS----LPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+KR+A A E LT+ + LP DR Y T+
Sbjct: 98 TYHHTFFEMLGNWSFGDYFKREAIEWAWELLTEAICNKVYKLPTDRFYATY 148
>gi|344263708|ref|XP_003403938.1| PREDICTED: alanyl-tRNA synthetase, mitochondrial [Loxodonta
africana]
Length = 985
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 272/816 (33%), Positives = 409/816 (50%), Gaps = 82/816 (10%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----AP 68
+ ++R +FL +F + GH LV S+ + P GD S+ FVN+GM QFK +FLG + P A
Sbjct: 39 ATAVRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAG 98
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN-DYYKRDACRMALEFLTK 127
+ RVANSQKCVR GG+HNDL GRD HHTFFEMLG+W+F +Y+K++AC MA E LT+
Sbjct: 99 FRRVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGSWAFGGEYFKKEACSMAWELLTQ 158
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
+P DRL+ +YFGG + L D ETRDIWL LGVP + G + NFWEMG TGP
Sbjct: 159 V-YGIPEDRLWVSYFGGDPKARLDPDLETRDIWLSLGVPASRVLSLGPQENFWEMGDTGP 217
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG +EIHYD+ G + L+E+WN+VF+ H R + ++ PL + ++DTG+
Sbjct: 218 CGPCTEIHYDLAGGTGAP---------QLVELWNLVFMQHNRETDGSLQPLPQRHVDTGM 268
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ERLV +LQ + STYDTDLF PLL I + GA PY ++ +DT+YR+++D+
Sbjct: 269 GLERLVAVLQGRRSTYDTDLFSPLLNAIHQGCGAPPYLGRVGAADEGRVDTAYRVVADHI 328
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
RM++V +AD + P + LR ++R A+ + ++ + G + L + E LGD+Y
Sbjct: 329 RMLSVCIADGVSPGMSGAPLVLRRILRRAVRFATEILRAPPG-FLGSLVPVVVETLGDIY 387
Query: 365 PEIQDSINKI-QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
PE+Q + +I L+ +E+ +L++ + L + P + F P V
Sbjct: 388 PELQKNSAQIASLVSDDEAAFLASLQRGRQIIDRTLRRLGPS-DMF-----PAEVAWSLS 441
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L+ L + E+ + D+ GL + L E + + + +
Sbjct: 442 LSGHLGLPLDLVELMLEEKGVQLDSAGLER-------------LAREEAQHRAQQAEPAR 488
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
K +V + + + P+TDD KY+Y Y F + ++ Q++
Sbjct: 489 KQGMRLDVHALGELRRQGVPLTDDSPKYNYFLRPTGG-YEFRACEAQVL------QLYTE 541
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
D A+ G GL+ D+TN YA GGQ D G YL Q++
Sbjct: 542 DGTAVTSIGGGQR-----------CGLLLDRTNFYAEQGGQASDRG--YLVRAEQQDVLF 588
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
+ G I+H +V G ++ VD RLGCM HT +HLLN ALR+ L
Sbjct: 589 PVARAQVCGGFILHEAVAPECLQV--GDQVQLHVDKAWRLGCMEKHTATHLLNWALRQAL 646
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ--VQVDRRHMR-AS 719
T Q+ + + LD + L+ + AVE + + + V D + +
Sbjct: 647 GPGTEQRGSHLNPERLRLDVATQA-PLTPQQLQAVEGAVQEAVGQDEPVYTDEVALALTA 705
Query: 720 ELPFLTHLTVIPGEIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGHIE 768
++P L L E+YPD V L S S E CCGTH+ TG +
Sbjct: 706 QVPGLRSLD----EVYPDPVRVVSVGVPVAQALDPASQAALQTSVELCCGTHLLRTGAVG 761
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
+IG + G + +TG+ ++ A E G+ L+
Sbjct: 762 DLVIIGERQLAKGTTRLLAITGEQAQQAREVGQSLA 797
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 77/107 (71%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG + P A + RVANSQKC+R GG+HNDL GRD
Sbjct: 66 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLG+W+F +Y+K++AC MA E LT+ +P DRL+ ++
Sbjct: 126 SHHTFFEMLGSWAFGGEYFKKEACSMAWELLTQ-VYGIPEDRLWVSY 171
>gi|321477760|gb|EFX88718.1| hypothetical protein DAPPUDRAFT_191289 [Daphnia pulex]
Length = 987
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 273/823 (33%), Positives = 413/823 (50%), Gaps = 86/823 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L + IR ++D+F + H V SS +P D ++ F N+GM QFK +FLG
Sbjct: 5 LSAAKIRQMYMDFFIEKKSHIYVHSSSTIPKDDPTLLFANAGMNQFKPLFLGTVDPNSDM 64
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
+ + RV N+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A E LT
Sbjct: 65 SKWIRVVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEVCTWAWELLT 124
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
LP DRLY TYFGG++ GL DEE R IWL LG+P + I MK NFWEMG G
Sbjct: 125 DV-FQLPKDRLYVTYFGGNENAGLQPDEECRQIWLSLGLPAERILPGSMKDNFWEMGDVG 183
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIH+D G +A VN D D++EIWN+VF++ R + ++ PL + +ID G
Sbjct: 184 PCGPCSEIHFDRIGGRDAA-HLVNMDDPDVLEIWNLVFMTFNRETDSSLKPLPRKHIDCG 242
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV+++Q+K S YDTD+F P+ E I+K + A Y + +D +YR+L+D+
Sbjct: 243 MGFERLVSVIQDKRSNYDTDIFQPIFEAIQKGTNAPAYQGKVGAEDVNGVDMAYRVLADH 302
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R +T+AL+D PD + LR V+R + + + K G L + ++LG
Sbjct: 303 ARTLTIALSDGGRPDNVGRGYVLRRVLRRGVRYATEKLNAKPG-FFASLVPTVCQVLGPT 361
Query: 364 YPEI-QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE+ +D I +I EE++ L + G
Sbjct: 362 FPEVNRDPQLVIDIINDEETQFLKTLTR-----------------------------GRD 392
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L + +++ T + GD+A+ LYDTYG ++ Q ++ K L++ A+E+ + +
Sbjct: 393 LLERTISKLNGQTTLPGDVAWRLYDTYGFPVDLTQLMSEEKGLSIDMVAYEEAKKQAQLL 452
Query: 483 SKAKA-------ASNVPDIDLMDLKHFPVTDDKYKYDYH--YDTNSKRYTFPCLDTNLVG 533
S+ K A +V I + K P TDD +KY+Y D Y F + ++
Sbjct: 453 SQGKGSGVDDTIAFDVHAITELQNKGVPPTDDSFKYNYKSVSDAVDSPYEFDVCTSKVI- 511
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
AIR ++ S +E G++ D+T+ YA +GGQ D G ++
Sbjct: 512 -------------AIRFQKAFHEEVSSGVE----CGILLDRTSFYAESGGQAYDEG--FI 552
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
T E + + + G ++H GNV + +V G ++ +D R M HT +H
Sbjct: 553 TKIGDEGTEFTVKNVQVRGGYVIHLGNVEGTLRV--GDEVKLSIDQSRRRLIMSNHTGTH 610
Query: 654 LLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
+LN ALR+V+ Q+ V D DF+ ++VD V E+ N++I +V
Sbjct: 611 VLNYALRQVVGNEADQRGSLVAPDRMRFDFTNKA-AMTVDQVKQTERIANEMIRKNQEVY 669
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTH 760
+ + L + E YPD V ++ I + N S E C GTH
Sbjct: 670 AKESSLVVAKAVQGLRAVFEETYPDPVRVVSIGIPVEQLEADPANPAGNSTSIEFCGGTH 729
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
V +GHI + ++ G+R I +TG + A++ L
Sbjct: 730 VKRSGHIGDFVISAEEAIAKGIRRIVAITGPEASKALKKADLL 772
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FLG + + RV N+QKCIR GGKHNDL G+D
Sbjct: 33 IPKDDPTLLFANAGMNQFKPLFLGTVDPNSDMSKWIRVVNTQKCIRAGGKHNDLDDVGKD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A E LT LP DRLY T+
Sbjct: 93 VYHHTFFEMLGNWSFGDYFKKEVCTWAWELLTD-VFQLPKDRLYVTY 138
>gi|390601960|gb|EIN11353.1| hypothetical protein PUNSTDRAFT_141744 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 956
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 274/809 (33%), Positives = 404/809 (49%), Gaps = 81/809 (10%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
+ ++RS F DYF ++GHT V SS +PY D ++ F N+GM QFK +FLG A
Sbjct: 11 TAPAVRSQFFDYF-RSKGHTYVPSSSTIPYEDPTLLFANAGMNQFKAIFLGTVDPHSEMA 69
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
+ RV NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + + E LT+
Sbjct: 70 KWKRVFNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIQYSWELLTE 129
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
LP DRLY TYF G + GL DEE R WL+ GV DHI K NFWEMG+TGP
Sbjct: 130 V-YKLPKDRLYVTYFEGDAKNGLVPDEEARQYWLDQGVSEDHILPGNAKDNFWEMGATGP 188
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIH+D G ++A VN D D++EIWN VFI R ++ L ++DTG+
Sbjct: 189 CGPCSEIHFDRIGGRNAAHL-VNQDDPDVLEIWNNVFIQFNREEDGSLKHLPSKHVDTGM 247
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV++LQ+ S YDTD+FLP+ + +++++G +PYG F + +DT+YR+++D+
Sbjct: 248 GFERLVSVLQDVRSNYDTDVFLPIFDKVQELTGVRPYGGKFGAEDVDGIDTAYRVVADHV 307
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T+AL+D P+ + LR ++R + V+ G L + E +GD++
Sbjct: 308 RTLTMALSDGGVPNNVGRGYVLRRILRRGARYARKKLGVEIGSFFSSLMPVVIEQMGDIF 367
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ ++I+ IL EE E F+ + G L +Y
Sbjct: 368 PEVRKRPDEIKEILDEEE------------------------ESFSRTLDRGEKLFEQYA 403
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
T+ + ++SG + LYDTYG ++ +A L + FE+ KE SK
Sbjct: 404 TR--TQQSGEKDLSGKDVWRLYDTYGFPVDLTLLMAEELGLGVNQAEFEEAQAASKEASK 461
Query: 485 A---KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
A K A++V +D+ D+ D K D +S ++ + + I Q
Sbjct: 462 ASLKKGAADVVKLDVHDIAALETNPDVPKTD-----DSAKFNQGNITAEIKAIYYNKQFL 516
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
S + GL+ D+T+ YA AGGQ D G +
Sbjct: 517 P---------------SSSGITEGTTFGLLLDRTSFYAEAGGQEYDTGNIVIDGVAD--- 558
Query: 602 KVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
E+ + + G ++H G++ + +V + S D R HT +H+LN ALR
Sbjct: 559 -FEVTNVQTFNGYVLHIGHLKYGNLEVGNQVVS--SYDELRRWPLRNNHTATHILNFALR 615
Query: 661 RVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
VL QK V + DFS + ++ D + +E D I V+V + +
Sbjct: 616 EVLGDHIDQKGSLVAPTKLRFDFS-HKAAIASDELTRIESISKDWIKKNVKVYSKELDLK 674
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDIS--------DKENVISR----EPCCGTHVFNTGHI 767
+ L + GE YPD V ++ + D EN+ R E C GTHV TG I
Sbjct: 675 TAHRIPGLRAVFGESYPDPVRVVTLEYDVEEIAKDIENLKWRSTSVEFCGGTHVAKTGDI 734
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
+ + G+R + +TG + AA
Sbjct: 735 KDFIITEESGIAKGIRRVIAVTGHEAAAA 763
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM QFK +FLG A + RV NSQKCIR GGKHNDL G+D
Sbjct: 37 IPYEDPTLLFANAGMNQFKAIFLGTVDPHSEMAKWKRVFNSQKCIRAGGKHNDLDDVGKD 96
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + + E LT+ LP DRLY T+
Sbjct: 97 SYHHTFFEMLGNWSFGDYFKKEAIQYSWELLTE-VYKLPKDRLYVTY 142
>gi|348689017|gb|EGZ28831.1| hypothetical protein PHYSODRAFT_473521 [Phytophthora sojae]
Length = 981
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 278/824 (33%), Positives = 408/824 (49%), Gaps = 90/824 (10%)
Query: 17 IRSSFLDYFCNTQG--HTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP---- 70
IR +F+D+F N HT KS P+VP D ++ F+N+GM Q+K +FLG +P
Sbjct: 27 IRKTFVDFFTNQTELPHTFWKSCPVVPLDDPTLLFINAGMNQYKPIFLGQVDPSHPMSKL 86
Query: 71 -RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP 129
R NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF +Y+K++A M+ LT+
Sbjct: 87 VRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGNYFKKEAVHMSFTLLTEV- 145
Query: 130 VSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
+ +RLY TYFGG ++ GLP DEETR IWL +P + + G K NFWEMG GPCG
Sbjct: 146 FGIDKERLYATYFGGDEKQGLPSDEETRQIWLNY-LPAERVLPFGCKDNFWEMGDVGPCG 204
Query: 190 YSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
+EIHYD G A VNAD D+IEIWN VFI R +VPL ++DTG+GF
Sbjct: 205 PCTEIHYDRIGN-RDASKLVNADLPDVIEIWNNVFIQFNREQDGKLVPLPHKHVDTGMGF 263
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERL +ILQ K S YDTD+F PL I+K + A PY + D +YR+++D+ R
Sbjct: 264 ERLASILQGKDSNYDTDVFTPLFAAIQKSTKAAPYTGKLGKEDPDKKDMAYRVVADHVRT 323
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
+T A+ D P + LR ++R A+ + G L EL + +LG+ +PE
Sbjct: 324 LTFAITDGAVPSNDGRGYVLRRILRRAVRYGQQFLNAPCGFLT-ELVPVVVNMLGEAFPE 382
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ +++ I+ +E + F ++ +K + + + + N + LV
Sbjct: 383 LIQKQKEVEEIILDEEKSFGRTLNKGIERFKKIAQG---IREANAGSDKALV-------- 431
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA- 485
+ G+ AF LYD+ G ++ + + + +T+ + +E+ + ERSK
Sbjct: 432 ----------VPGEDAFFLYDSMGFPIDLTEIMVEEEGMTVDVKGYEECMRLQSERSKTD 481
Query: 486 --KAASN--------VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
K +N + + K TDD KY++ T++K +V I
Sbjct: 482 RKKGGNNGARPLVLEARETSALAGKSITATDDMAKYEWSIKTSAK----------VVAIF 531
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
+ S +D ++ VG+I DKT+ YA AGGQI D GV
Sbjct: 532 TTTE------------SSSDFVDEVKAGDFERVGVILDKTSFYAQAGGQIYDTGV----- 574
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVS-SFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+ N K+++ + S G ++H G + S S KV G +VD R HT +H+
Sbjct: 575 VSGANFKLDVDSVESYAGYVMHMGPIASGSIKV--GDAVECQVDYARRSKIAPNHTMTHV 632
Query: 655 LNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN ALR+VL T Q+ V DF+ + L + +A VE +D+I Q++V
Sbjct: 633 LNFALRKVLGTTVDQRGSLVDESRLRFDFT-NNKALKANQLAEVEAICDDIIKQQLEVYT 691
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDIS--------DKENV----ISREPCCGTHV 761
+ +E + L + GE YPD V ++ I D EN S E C GTH+
Sbjct: 692 QDSAQAEAKRIQGLRAVFGETYPDFVRVVSIGQPIAPMLEDPENSTWSNFSVEFCGGTHL 751
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST 805
NT + + + G+R + T D +K A E G L
Sbjct: 752 KNTKEAKKFVLYEEGAIAKGIRRVSAYTCDLAKEAEERGAKLQA 795
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F+N+GM Q+K +FLG +P R NSQKCIR GGKHNDL G+D
Sbjct: 52 VPLDDPTLLFINAGMNQYKPIFLGQVDPSHPMSKLVRACNSQKCIRAGGKHNDLDDVGKD 111
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF +Y+K++A M+ LT+ + +RLY T+
Sbjct: 112 VYHHTFFEMLGNWSFGNYFKKEAVHMSFTLLTE-VFGIDKERLYATY 157
>gi|297852712|ref|XP_002894237.1| cytosolic tRNA-Ala synthetase [Arabidopsis lyrata subsp. lyrata]
gi|297340079|gb|EFH70496.1| cytosolic tRNA-Ala synthetase [Arabidopsis lyrata subsp. lyrata]
Length = 955
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 276/812 (33%), Positives = 416/812 (51%), Gaps = 98/812 (12%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP- 66
S + ++ +R +++D+F +GH SSP+VP+ D ++ F N+GM Q+K +FLG
Sbjct: 7 SETQWPARRVRDTYVDFF-KGKGHKFWPSSPVVPHNDPTLLFANAGMNQYKPIFLGTADP 65
Query: 67 ----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMAL 122
+ R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A A
Sbjct: 66 NTELSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEWAW 125
Query: 123 EFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEM 182
E LTK LP DR+Y TYFGG ++ GL D E RDIWL+ +P + G K NFWEM
Sbjct: 126 ELLTKV-YGLPTDRIYATYFGGDEKAGLQPDNEARDIWLQF-LPSGRVLPFGCKDNFWEM 183
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
G TGPCG +EIHYD G +A VN D +EIWN+VFI R S ++ PL +
Sbjct: 184 GDTGPCGPCTEIHYDRVGNRDAAYL-VNNDDPTCLEIWNLVFIQFNRESDGSLKPLPAKH 242
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRM 302
+DTG+GFERL ++LQNK S YDTD+F+P+ + I+K +GA+ Y + +D +YR+
Sbjct: 243 VDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARAYSGKVGPEDDDRVDMAYRV 302
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI 359
++D+ R ++ A+AD P + LR ++R A+ + + K ++G L ++ +
Sbjct: 303 VADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGKQILKAEEG-FFNGLVSSVIRV 361
Query: 360 LGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
+GDV+ E+++ KI I+ EE F K LVK +E+F E+ V
Sbjct: 362 MGDVFTELKEHEKKITEIIKEEEASF----------CKTLVKG---IEKFQKAEQA--VQ 406
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
G +SG+ AF L+DTYG ++ Q +A ++L + E F + + E
Sbjct: 407 G--------------NTLSGEDAFVLWDTYGFPLDLTQLMAEERRLLVDVEGFNKAMEEA 452
Query: 480 KERS-----KAKAASNVPDIDLMDLKH---FPVTDDKYKYDYHYDTNSKRYTFPCLDTNL 531
+ERS K + V D D H TDD +KY + D S+ L
Sbjct: 453 RERSRSAQNKQAGGAIVMDADATSTLHKTGVSATDDSFKYIWFQDHESE----------L 502
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
I G S A+ D+ VGL+ T+ YA GGQI D G+
Sbjct: 503 KAIYTGSTFL----------ESLAATDN--------VGLVLGSTSFYAEQGGQIFDTGLI 544
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHFGNVVS-SFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ T V+I G +VH G + + +V+ G +VD R HT
Sbjct: 545 EGSFGTFNVCNVQI-----FGGFVVHIGYLSKDAGEVSVGDKVICKVDYERRKLIAPNHT 599
Query: 651 TSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H+LN AL+ VL QK V ++ DFS +G+ + + + +E +N I +++
Sbjct: 600 CTHMLNFALKEVLGDHIDQKGSIVLPEKLRFDFS-HGKPVDPEDLRRIESIVNKQIKDEL 658
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKEN----VISREPCC 757
V + SE + L + GE+YPD V ++ I +D EN ++S E C
Sbjct: 659 DVFSKEAVLSEAKRIKGLRAVFGEVYPDPVRVVSIGRQVEDLLADPENNEWSLLSSEFCG 718
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLT 789
GTH+ NT ++ ++ + G+R + +T
Sbjct: 719 GTHITNTREAKAFALLSEEGIAKGIRRVTAVT 750
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + R N+QKCIR GGKHNDL G+D
Sbjct: 38 VPHNDPTLLFANAGMNQYKPIFLGTADPNTELSKLTRACNTQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A A E LTK LP DR+Y T+
Sbjct: 98 TYHHTFFEMLGNWSFGDYFKKEAIEWAWELLTK-VYGLPTDRIYATY 143
>gi|348576208|ref|XP_003473879.1| PREDICTED: LOW QUALITY PROTEIN: alanyl-tRNA synthetase,
mitochondrial-like [Cavia porcellus]
Length = 985
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 283/826 (34%), Positives = 415/826 (50%), Gaps = 106/826 (12%)
Query: 16 SIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYP 70
++R +FL +F + GH LV S+ + P GD S+ FVN+GM QFK +FLG A +
Sbjct: 41 AVRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFR 100
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN-DYYKRDACRMALEFLTKPP 129
RVANSQKCVR GG+HNDL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+
Sbjct: 101 RVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQI- 159
Query: 130 VSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
+P DRL+ +YFGG + GL D ETRDIWL LGVP + + G + NFWEMG TGPCG
Sbjct: 160 YGIPKDRLWVSYFGGDPKAGLDPDLETRDIWLSLGVPVNRVLSFGPQENFWEMGDTGPCG 219
Query: 190 YSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
+EIHYD+ G L+E+WN+VF+ + R + ++ L + ++DTG+G
Sbjct: 220 PCTEIHYDLAG---------GVGAPQLVELWNLVFMQYNREANGSLQSLPQRHVDTGMGL 270
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERLV +LQ K STYDTDLF PLL I + GA PY ++ DT+YR+++D+ R
Sbjct: 271 ERLVAMLQGKHSTYDTDLFSPLLHAIHQGCGAPPYLGRVGAADEGHTDTAYRVVADHIRT 330
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
+++ +AD +FP + LR ++R A+ S +V + G + L + E LGD YPE
Sbjct: 331 LSICIADGVFPGMSGAPLVLRRILRRAVRFSTEVLQAPPG-FLGSLVPVVVETLGDTYPE 389
Query: 367 IQDSINKIQLILGEESRIF-DNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
++ + +I ++ EE F D+L++ G + +
Sbjct: 390 LRRNSAQIASLVSEEEAAFLDSLQR-----------------------------GRRIIE 420
Query: 426 KQLARDPSITEISGDMAFTLY--DTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE---LK 480
+ L R D+A++L GL ++++ + A K + L E Q + E L+
Sbjct: 421 RTLKRLGPSDLFPADVAWSLSMSGNLGLPLDLVELMLAEKGVHLDSERLAQLVEEEAQLR 480
Query: 481 ERSKAKAASNVPDID---LMDLKHFPV--TDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
R A +D L +L+H V TDD KY Y + PC L
Sbjct: 481 GRQAEPAQEQRLRLDVHALAELQHRGVSPTDDSPKYSYSLQSTGNYEFGPCEAQVL---- 536
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
Q++ D A+ AS+ Q GL+ ++TN YA GGQ D G YL
Sbjct: 537 ---QLYTEDGAAV------ASVGPGQR-----CGLLLNRTNFYAEQGGQASDRG--YLVR 580
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
Q++ + + G ++H V++S + G ++ VD RL CM HT +HLL
Sbjct: 581 IEQQDVLFPVTQAQVWGGFVLH--EVLASEHLQVGDLVQLHVDEDWRLSCMEKHTATHLL 638
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGET-LSVDSVAAVEKYINDVIANQVQVDRR 714
N ALR L ++ + E L F V ++ L+ + + + I D + VQ D+
Sbjct: 639 NWALRETLGPNVEQRGSHLNPE-RLRFDVATQSPLTPEQL----RTIEDTVQEAVQQDK- 692
Query: 715 HMRASELPFLTHLTVIPG-----EIYPDDV-----------ILIDISDKENVISREPCCG 758
+ E+P L IPG E+YPD V L +S S E CCG
Sbjct: 693 PVYMEEVP-LELTACIPGLRSLDEVYPDPVRVVSVGVPVACALDPMSQAALQASVELCCG 751
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
TH+ TG + + G + G + +TG+ ++ A E G+ L+
Sbjct: 752 THLLRTGAVGDLVITGERQLTKGTTRLLAVTGEQAQQAREVGESLA 797
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RVANSQKC+R GG+HNDL GRD
Sbjct: 66 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P DRL+ ++
Sbjct: 126 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-IYGIPKDRLWVSY 171
>gi|70983336|ref|XP_747195.1| alanyl-tRNA synthetase [Aspergillus fumigatus Af293]
gi|66844821|gb|EAL85157.1| alanyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
Length = 1011
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 274/811 (33%), Positives = 410/811 (50%), Gaps = 92/811 (11%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
+K +R +FLDYF GHT V SSP+VP D ++ F N+GM QFK++FLG A
Sbjct: 62 TAKRVRDTFLDYF-RQNGHTFVPSSPVVPLSDPTLLFTNAGMNQFKSIFLGTVDPQSDFA 120
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K DA R + E LTK
Sbjct: 121 KLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKEDAIRYSWELLTK 180
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
L RLY TYF G ++ GL D E + +W GVP DHI MK NFWEMG GP
Sbjct: 181 V-YGLDPQRLYVTYFEGHEEGGLEPDLEAKALWRAAGVPEDHILPGNMKDNFWEMGDQGP 239
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIHYD G ++A VN D +++EIWN VFI + R S ++ PL ++DTG+
Sbjct: 240 CGPCSEIHYDRIGGRNAAHL-VNQDDPNVLEIWNNVFIQYNRESDRSLRPLPNKHVDTGM 298
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV++LQ+K+S YDTD+F PL I+ ++GA+ Y F + +DT+YR+++D+
Sbjct: 299 GFERLVSVLQDKSSNYDTDVFSPLFNAIKNITGAREYRGRFGADDSDGIDTAYRVVADHV 358
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T A++D + P++ + +R V+R + F+V+ G ++ + E LGD++
Sbjct: 359 RTLTFAISDGVTPNSDGRGYVVRRVLRRGARYARKYFQVEIGNFFSKIVPTLVEQLGDMF 418
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ + + IL EE F K L + + + E +
Sbjct: 419 PELKKKQHDVMEILDEEEISF----------AKTLDRGERQFENY--------------- 453
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
Q A+ ++ G + LYDT+G ++ + +A + L + FE+ KE SK
Sbjct: 454 -AQQAKIKGDDKLHGADVWRLYDTFGFPVDLTRLMAEERGLNIDDLEFEEARLRAKEASK 512
Query: 485 A--KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
K+A+ +D+ DL P TDD K+
Sbjct: 513 GQKKSATGTVKLDVHDLGKLEKMNVVPKTDDSAKF------------------------- 547
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
G + AI H ++ S + Q+ +G+I D+TN YA GGQ +D G +
Sbjct: 548 GKGNITAEIKAIYHGKNFHS-STAQIPDGEQIGIILDRTNFYAEQGGQENDTGRIIIDGR 606
Query: 597 TQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+ +E+G++ G ++H G + SF + G E D R HT +H+L
Sbjct: 607 AE----LEVGDVQLYAGYVLHTGFMKYGSFSI--GDAVLCEYDELRRWPIRNNHTGTHIL 660
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
N ALRRVL QK V +++ DFS + ++ + +E+ + I V +
Sbjct: 661 NFALRRVLGDSVEQKGSLVAAEKLRFDFS-HKSAVTEKELEKIEEISTEYIRQNCDVYSQ 719
Query: 715 HMRASELPFLTHLTVIPGEIYPD-----------DVILIDISDKENV-ISREPCCGTHVF 762
+ + ++ + + GE YPD + IL ++ D + +S E C GTHV
Sbjct: 720 EVPLATARRISGVRAVFGETYPDPVRVVSVGVEVEEILKNVEDPRWLEVSIEFCGGTHVQ 779
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I+ ++ G+R I +TG+ +
Sbjct: 780 KTGDIKDLIILEENGIAKGIRRIIAVTGEDA 810
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 69/107 (64%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK++FLG A NSQKCIR GGKHNDL G+D
Sbjct: 88 VPLSDPTLLFTNAGMNQFKSIFLGTVDPQSDFAKLKSAVNSQKCIRAGGKHNDLDDVGKD 147
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K DA R + E LTK L RLY T+
Sbjct: 148 SYHHTFFEMLGNWSFGDYFKEDAIRYSWELLTK-VYGLDPQRLYVTY 193
>gi|45188236|ref|NP_984459.1| ADR363Cp [Ashbya gossypii ATCC 10895]
gi|44983080|gb|AAS52283.1| ADR363Cp [Ashbya gossypii ATCC 10895]
gi|374107673|gb|AEY96581.1| FADR363Cp [Ashbya gossypii FDAG1]
Length = 956
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 273/822 (33%), Positives = 397/822 (48%), Gaps = 102/822 (12%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLT 65
I R ++++RS+F+DYF + H LV SSP++PY D ++ F N+GM QFK +FLG+
Sbjct: 3 IGDKQRWTAQNVRSTFIDYF-KAKDHKLVPSSPVIPYDDPTLLFANAGMNQFKPIFLGMV 61
Query: 66 -PAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
PA R N+QKC+R GGKHNDL G DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 62 DPASDFYTLKRAVNTQKCIRAGGKHNDLEDVGLDSYHHTFFEMLGNWSFGDYFKKEAIAY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ E LTK LP DRLY TYF G + GL DEE RD+WL +GV DH+ +K NFW
Sbjct: 122 SWELLTKV-YGLPEDRLYVTYFEGDESLGLAADEEARDLWLSVGVAPDHVIAANVKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SE+H+D G ++A A VN D ++IEIWN VFI R ++ PL
Sbjct: 181 EMGDQGPCGPCSEVHFDRIGGRNAA-ALVNQDDPNVIEIWNNVFIQFNREHDGSLRPLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
++DTG+GFERLV++LQ+ S YDTD+F PL I++++G +PY F ++ +DT+Y
Sbjct: 240 KHVDTGMGFERLVSVLQDVPSNYDTDVFQPLFARIQEITGVRPYSGKFGADDKDGIDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R +T+ALAD PD + LR ++R GK +L+ +
Sbjct: 300 RVLADHVRTLTIALADGGVPDNDGRGYVLRRILRRGARYVRKYMNYPTGKFFSQLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
E DVYPE+ + +S +FD L + K L + + E++
Sbjct: 360 EQFKDVYPELTKN----------QSYLFDILDEEEASFAKTLDRGEKLFEKY-------- 401
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
+ A++ + G + LYDTYG ++ Q +A L + +E FEQ
Sbjct: 402 --------AETAKNSGSKILDGKQVWRLYDTYGFPVDLTQLMADEHGLKVDNEGFEQAKQ 453
Query: 478 ELKERSKAKAAS--------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
E E SK + NV ++ + + P TDD KY
Sbjct: 454 ESYEASKKNGSKGDANLIKLNVHEVSQLSDEGVPRTDDSAKY------------------ 495
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
G Q + I G + E G++ D+T YA GGQ D G
Sbjct: 496 -------GTQDI---EATILRIHDGENFVEQMTEVGKQYGILLDRTCFYAEQGGQEYDKG 545
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ + + N + + G + H GN+ K+ G D R H
Sbjct: 546 KLVIDDAAEFN----VDNVQQYSGYVFHTGNLADG-KLCVGDKIIASYDELRRYPIRNNH 600
Query: 650 TTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +HLLN ALR +L Q+ V ++ DFS + + +S + + VE I NQ
Sbjct: 601 TGTHLLNHALRTILGDNIDQRGSLVTPEKLRFDFS-HKKPMSYEELEQVE-----TICNQ 654
Query: 709 VQVDRRHMRASELPF-----LTHLTVIPGEIYPDDVILIDISDKENVISREP-------- 755
+ R + ++P + + + GE YPD V ++ + + I P
Sbjct: 655 QIRENRSVYYKDIPLDVAKSIHSIRAVFGETYPDPVRVVSVGKSVDEILESPSNEEWAKY 714
Query: 756 ----CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
C GTHV TG I+ +I G+R I ++ +
Sbjct: 715 SIELCGGTHVSKTGDIKEFVIIEESGIAKGIRRIVAVSASEA 756
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLT-PAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM QFK +FLG+ PA R N+QKCIR GGKHNDL G D
Sbjct: 36 IPYDDPTLLFANAGMNQFKPIFLGMVDPASDFYTLKRAVNTQKCIRAGGKHNDLEDVGLD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK LP DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAIAYSWELLTK-VYGLPEDRLYVTY 141
>gi|5734779|gb|AAD50044.1|AC007980_9 cytosolic tRNA-Ala synthetase [Arabidopsis thaliana]
gi|27311841|gb|AAO00886.1| Unknown protein [Arabidopsis thaliana]
gi|31711780|gb|AAP68246.1| At1g50200 [Arabidopsis thaliana]
Length = 955
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 273/812 (33%), Positives = 417/812 (51%), Gaps = 98/812 (12%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP- 66
S + +K +R +++D+F +GH SSP+VP+ D ++ F N+GM Q+K +FLG
Sbjct: 7 SETQWPAKRVRDTYVDFF-RGKGHKFWPSSPVVPHNDPTLLFANAGMNQYKPIFLGTADP 65
Query: 67 ----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMAL 122
+ R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A A
Sbjct: 66 NTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEWAW 125
Query: 123 EFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEM 182
E LTK LP DR+Y TYFGG ++ GL D E RDIWL++ +P + G K NFWEM
Sbjct: 126 ELLTKV-YGLPTDRIYATYFGGDEKAGLQPDNEARDIWLKV-LPSGRVLPFGCKDNFWEM 183
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
G TGPCG +EIHYD G +A + VN D +EIWN+VFI R S ++ PL +
Sbjct: 184 GDTGPCGPCTEIHYDRIGNRDAA-SLVNNDDPTCLEIWNLVFIQFNRESDGSLKPLPAKH 242
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRM 302
+DTG+GFERL ++LQNK S YDTD+F+P+ + I+K +GA+PY + +D +YR+
Sbjct: 243 VDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVGPEDVDRVDMAYRV 302
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI 359
++D+ R ++ A+AD P + LR ++R A+ +++ K ++G L ++ +
Sbjct: 303 VADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGKEILKAEEG-FFNGLVSSVIRV 361
Query: 360 LGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
+GDV+ E+++ KI I+ EE F K L K +E+F
Sbjct: 362 MGDVFTELKEHEKKITDIIKEEEASF----------CKTLAKG---IEKF---------- 398
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
++ + +SGD AF L+DTYG ++ Q +A + L + + F + + E
Sbjct: 399 ------RKAGQAVQGNTLSGDDAFILWDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEA 452
Query: 480 KERS-----KAKAASNVPDIDLMDLKH---FPVTDDKYKYDYHYDTNSKRYTFPCLDTNL 531
+ERS K + V D D H TDD +KY + D S+ L
Sbjct: 453 RERSRSAQNKQAGGAIVMDADATSTLHKAGVSATDDSFKYIWFQDHESE----------L 502
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
I G S A+ D+ VGL+ T+ YA GGQI D G+
Sbjct: 503 KAIYTGSTFL----------ESSAASDN--------VGLVLGSTSFYAEQGGQIFDTGLI 544
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ T V+I G ++H G + + +V+ G +VD R HT
Sbjct: 545 EGSFGTFNVCNVQI-----FGGFVLHIGYLSKETGEVSVGDKVICKVDYERRKLIAPNHT 599
Query: 651 TSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H+LN AL+ VL QK V ++ DFS +G+ + + + +E +N I +++
Sbjct: 600 CTHMLNYALKEVLGDHIDQKGSIVLPEKLRFDFS-HGKPVDPEDLRRIESIVNKQIKDEL 658
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKEN----VISREPCC 757
V + SE + L + GE+YPD V ++ I +D EN ++S E C
Sbjct: 659 DVFSKEAVLSEAKRIKGLRAVFGEVYPDPVRVVSIGRKVEDLLADPENNEWSLLSSEFCG 718
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLT 789
GTH+ NT ++ ++ + G+R + +T
Sbjct: 719 GTHITNTREAKAFALLSEEGIAKGIRRVTAVT 750
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + R N+QKCIR GGKHNDL G+D
Sbjct: 38 VPHNDPTLLFANAGMNQYKPIFLGTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A A E LTK LP DR+Y T+
Sbjct: 98 TYHHTFFEMLGNWSFGDYFKKEAIEWAWELLTK-VYGLPTDRIYATY 143
>gi|393217115|gb|EJD02604.1| hypothetical protein FOMMEDRAFT_167809 [Fomitiporia mediterranea
MF3/22]
Length = 956
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 277/822 (33%), Positives = 407/822 (49%), Gaps = 91/822 (11%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
S+ +R +F DYF +GHT V+SS +PY D ++ F N+GM QFK +FLG A
Sbjct: 11 SSRKVRQTFFDYF-KERGHTYVQSSSTIPYEDPTLLFANAGMNQFKAIFLGTVDPNSEMA 69
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
+ RV NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K+DA + + LT+
Sbjct: 70 KWKRVFNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKDAITFSWQLLTE 129
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
LP DRLY TYF G + GL D+E R+ W G+P HI K NFWEMG+TGP
Sbjct: 130 V-YGLPKDRLYVTYFEGDPKNGLEPDDEAREYWKAQGLPDSHILTGNAKDNFWEMGATGP 188
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIHYD G ++A VN D +++EIWN VFI R S ++ PL ++DTG+
Sbjct: 189 CGPCSEIHYDRIGGRNAAHL-VNQDDPNVLEIWNNVFIQFNRESDGSLRPLPAKHVDTGM 247
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV+++Q+++S YDTD+F PL + I +++G +PY F + +D +YR+++D+
Sbjct: 248 GFERLVSVIQDRSSNYDTDIFEPLFKRIHELTGVRPYEGRFGKDDEDGVDMAYRVVADHV 307
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++ ALAD P+ + LR ++R + V+ G L + E LGDV+
Sbjct: 308 RTLSFALADGGVPNNVGRGYVLRRILRRGARYARKKLGVQIGSFFSSLVPTVVEQLGDVF 367
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ ++I+ IL EE E F + G L +Y
Sbjct: 368 PELHKRTDEIKEILDEEE------------------------ESFARTLDRGEKLFEQYA 403
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+K L + PS T ++G+ + LYDT+G ++ +A L + E F++ + KE SK
Sbjct: 404 SKAL-QSPSKT-LNGEDVWRLYDTFGFPVDLTLLMAEELGLGIDQEGFDKAQAKSKEASK 461
Query: 485 A---KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
K ++ +D+ D+ P T+D K+ NL I
Sbjct: 462 GGVKKGDKDLVKLDVHDIASLDKNDTVPKTNDDAKF------------------NLGNIT 503
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
+ DK + H +GA + + G+I DKTN YA AGGQ D G +
Sbjct: 504 ATVKAIYHDKSFVNH--TGA------ISEDTTFGIILDKTNFYAEAGGQEYDTGSITIDG 555
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+ E+ + S G ++H G ++ +++ G D R HT +H+L
Sbjct: 556 VAE----FEVTNVQSYSGYVLHTG-ILKYGRLSVGDEVIATYDELRRWPLRNNHTATHIL 610
Query: 656 NAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
N +LR VL QK V + DFS + +S + +E D I V+V +
Sbjct: 611 NFSLREVLGDHIDQKGSLVAPTKLRFDFS-HKSQISPTELQKIEDMSIDWIKRDVKVFSK 669
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDIS--------DKENVISR----EPCCGTHVF 762
+ + L + GE YPD V ++ + D EN R E C GTHV
Sbjct: 670 ELDLKSGYKIPGLRAVFGEAYPDPVRVVTLEYDVEEIAKDLENSKWRKTSIEFCGGTHVA 729
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
TG I+ ++ G+R + +TG + K +
Sbjct: 730 KTGDIKGFVIVEESGIAKGIRRVTAVTGHEAADVTRQAKTFT 771
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM QFK +FLG A + RV NSQKCIR GGKHNDL G+D
Sbjct: 37 IPYEDPTLLFANAGMNQFKAIFLGTVDPNSEMAKWKRVFNSQKCIRAGGKHNDLDDVGKD 96
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K+DA + + LT+ LP DRLY T+
Sbjct: 97 SYHHTFFEMLGNWSFGDYFKKDAITFSWQLLTE-VYGLPKDRLYVTY 142
>gi|30694735|ref|NP_175439.2| Alanyl-tRNA synthetase [Arabidopsis thaliana]
gi|21542451|sp|P36428.3|SYA_ARATH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS; Flags: Precursor
gi|332194403|gb|AEE32524.1| Alanyl-tRNA synthetase [Arabidopsis thaliana]
Length = 1003
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 273/812 (33%), Positives = 417/812 (51%), Gaps = 98/812 (12%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP- 66
S + +K +R +++D+F +GH SSP+VP+ D ++ F N+GM Q+K +FLG
Sbjct: 55 SETQWPAKRVRDTYVDFF-RGKGHKFWPSSPVVPHNDPTLLFANAGMNQYKPIFLGTADP 113
Query: 67 ----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMAL 122
+ R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A A
Sbjct: 114 NTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEWAW 173
Query: 123 EFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEM 182
E LTK LP DR+Y TYFGG ++ GL D E RDIWL++ +P + G K NFWEM
Sbjct: 174 ELLTKV-YGLPTDRIYATYFGGDEKAGLQPDNEARDIWLKV-LPSGRVLPFGCKDNFWEM 231
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
G TGPCG +EIHYD G +A + VN D +EIWN+VFI R S ++ PL +
Sbjct: 232 GDTGPCGPCTEIHYDRIGNRDAA-SLVNNDDPTCLEIWNLVFIQFNRESDGSLKPLPAKH 290
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRM 302
+DTG+GFERL ++LQNK S YDTD+F+P+ + I+K +GA+PY + +D +YR+
Sbjct: 291 VDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVGPEDVDRVDMAYRV 350
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI 359
++D+ R ++ A+AD P + LR ++R A+ +++ K ++G L ++ +
Sbjct: 351 VADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGKEILKAEEG-FFNGLVSSVIRV 409
Query: 360 LGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
+GDV+ E+++ KI I+ EE F K L K +E+F
Sbjct: 410 MGDVFTELKEHEKKITDIIKEEEASF----------CKTLAKG---IEKF---------- 446
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
++ + +SGD AF L+DTYG ++ Q +A + L + + F + + E
Sbjct: 447 ------RKAGQAVQGNTLSGDDAFILWDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEA 500
Query: 480 KERS-----KAKAASNVPDIDLMDLKH---FPVTDDKYKYDYHYDTNSKRYTFPCLDTNL 531
+ERS K + V D D H TDD +KY + D S+ L
Sbjct: 501 RERSRSAQNKQAGGAIVMDADATSTLHKAGVSATDDSFKYIWFQDHESE----------L 550
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
I G S A+ D+ VGL+ T+ YA GGQI D G+
Sbjct: 551 KAIYTGSTFL----------ESSAASDN--------VGLVLGSTSFYAEQGGQIFDTGLI 592
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ T V+I G ++H G + + +V+ G +VD R HT
Sbjct: 593 EGSFGTFNVCNVQI-----FGGFVLHIGYLSKETGEVSVGDKVICKVDYERRKLIAPNHT 647
Query: 651 TSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H+LN AL+ VL QK V ++ DFS +G+ + + + +E +N I +++
Sbjct: 648 CTHMLNYALKEVLGDHIDQKGSIVLPEKLRFDFS-HGKPVDPEDLRRIESIVNKQIKDEL 706
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKEN----VISREPCC 757
V + SE + L + GE+YPD V ++ I +D EN ++S E C
Sbjct: 707 DVFSKEAVLSEAKRIKGLRAVFGEVYPDPVRVVSIGRKVEDLLADPENNEWSLLSSEFCG 766
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLT 789
GTH+ NT ++ ++ + G+R + +T
Sbjct: 767 GTHITNTREAKAFALLSEEGIAKGIRRVTAVT 798
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + R N+QKCIR GGKHNDL G+D
Sbjct: 86 VPHNDPTLLFANAGMNQYKPIFLGTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKD 145
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A A E LTK LP DR+Y T+
Sbjct: 146 TYHHTFFEMLGNWSFGDYFKKEAIEWAWELLTK-VYGLPTDRIYATY 191
>gi|159123802|gb|EDP48921.1| alanyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
Length = 1011
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 274/811 (33%), Positives = 410/811 (50%), Gaps = 92/811 (11%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
+K +R +FLDYF GHT V SSP+VP D ++ F N+GM QFK++FLG A
Sbjct: 62 TAKRVRDTFLDYF-RQNGHTFVPSSPVVPLSDPTLLFTNAGMNQFKSIFLGTVDPQSDFA 120
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K DA R + E LTK
Sbjct: 121 KLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKEDAIRYSWELLTK 180
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
L RLY TYF G ++ GL D E + +W GVP DHI MK NFWEMG GP
Sbjct: 181 V-YGLDPQRLYVTYFEGHEEGGLEPDLEAKALWRAAGVPEDHILPGNMKDNFWEMGDQGP 239
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIHYD G ++A VN D +++EIWN VFI + R S ++ PL ++DTG+
Sbjct: 240 CGPCSEIHYDRIGGRNAAHL-VNQDDPNVLEIWNNVFIQYNRESDRSLRPLPNKHVDTGM 298
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV++LQ+K+S YDTD+F PL I+ ++GA+ Y F + +DT+YR+++D+
Sbjct: 299 GFERLVSVLQDKSSNYDTDVFSPLFNAIKNITGAREYRGRFGADDSDGIDTAYRVVADHV 358
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T A++D + P++ + +R V+R + F+V+ G ++ + E LGD++
Sbjct: 359 RTLTFAISDGVTPNSDGRGYVVRRVLRRGARYARKYFQVEIGNFFSKIVPTLVEQLGDMF 418
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ + + IL EE F K L + + + E +
Sbjct: 419 PELKKKQHDVMEILDEEEISF----------AKTLDRGERQFENY--------------- 453
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
Q A+ ++ G + LYDT+G ++ + +A + L + FE+ KE SK
Sbjct: 454 -AQQAKIKGDDKLHGADVWRLYDTFGFPVDLTRLMAEERGLNIDDLEFEEARLRAKEASK 512
Query: 485 A--KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
K+A+ +D+ DL P TDD K+
Sbjct: 513 GQKKSATGTVKLDVHDLGKLEKMNDVPKTDDSAKF------------------------- 547
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
G + AI H ++ S + Q+ +G+I D+TN YA GGQ +D G +
Sbjct: 548 GKGNITAEIKAIYHGKNFHS-STAQIPDGEQIGIILDRTNFYAEQGGQENDTGRIIIDGR 606
Query: 597 TQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+ +E+G++ G ++H G + SF + G E D R HT +H+L
Sbjct: 607 AE----LEVGDVQLYAGYVLHTGFMKYGSFSI--GDAVLCEYDELRRWPIRNNHTGTHIL 660
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
N ALRRVL QK V +++ DFS + ++ + +E+ + I V +
Sbjct: 661 NFALRRVLGDSVEQKGSLVAAEKLRFDFS-HKSAVTEKELEKIEEISTEYIRQNCDVYSQ 719
Query: 715 HMRASELPFLTHLTVIPGEIYPD-----------DVILIDISDKENV-ISREPCCGTHVF 762
+ + ++ + + GE YPD + IL ++ D + +S E C GTHV
Sbjct: 720 EVPLATARRISGVRAVFGETYPDPVRVVSVGVEVEEILKNVEDPRWLEVSIEFCGGTHVQ 779
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I+ ++ G+R I +TG+ +
Sbjct: 780 KTGDIKDLIILEENGIAKGIRRIIAVTGEDA 810
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 69/107 (64%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK++FLG A NSQKCIR GGKHNDL G+D
Sbjct: 88 VPLSDPTLLFTNAGMNQFKSIFLGTVDPQSDFAKLKSAVNSQKCIRAGGKHNDLDDVGKD 147
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K DA R + E LTK L RLY T+
Sbjct: 148 SYHHTFFEMLGNWSFGDYFKEDAIRYSWELLTK-VYGLDPQRLYVTY 193
>gi|119484060|ref|XP_001261933.1| alanyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
gi|119410089|gb|EAW20036.1| alanyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
Length = 961
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 274/811 (33%), Positives = 410/811 (50%), Gaps = 92/811 (11%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
+K +R +FLDYF GHT V SSP+VP D ++ F N+GM QFK++FLG A
Sbjct: 12 TAKRVRDTFLDYF-RQNGHTFVPSSPVVPLSDPTLLFTNAGMNQFKSIFLGTVDPQSDFA 70
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K DA R + E LTK
Sbjct: 71 KLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKEDAIRYSWELLTK 130
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
L RLY TYF G ++ GL D E + +W GVP DHI MK NFWEMG GP
Sbjct: 131 V-YGLDPQRLYVTYFEGHEEGGLEPDLEAKALWRAAGVPEDHILPGNMKDNFWEMGDQGP 189
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIHYD G ++A VN D +++EIWN VFI + R S ++ PL ++DTG+
Sbjct: 190 CGPCSEIHYDRIGGRNAAHL-VNQDDPNVLEIWNNVFIQYNRESDRSLRPLPNKHVDTGM 248
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV++LQ+K+S YDTD+F PL I+ ++GA+ Y F + +DT+YR+++D+
Sbjct: 249 GFERLVSVLQDKSSNYDTDVFSPLFNAIKNITGAREYRGMFGADDSDGIDTAYRVVADHV 308
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T A++D + P++ + +R V+R + F+V+ G ++ + E LGD++
Sbjct: 309 RTLTFAISDGVTPNSDGRGYVVRRVLRRGARYARKYFQVEIGNFFSKIVPTLVEQLGDMF 368
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ + + IL EE F K L + + + E +
Sbjct: 369 PELKKKQHDVMEILDEEEISF----------AKTLDRGERQFENY--------------- 403
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
Q A+ ++ G + LYDT+G ++ + +A + L + FE+ KE SK
Sbjct: 404 -AQQAKIKGDDKLHGADVWRLYDTFGFPVDLTRLMAEERGLNIDDLEFEEARLRAKEASK 462
Query: 485 A--KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
K+A+ +D+ DL P TDD K+
Sbjct: 463 GQKKSATGTVKLDVHDLGKLEKMNDVPKTDDSAKF------------------------- 497
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
G + AI H ++ S + Q+ +G+I D+TN YA GGQ +D G +
Sbjct: 498 GKGNITAEIKAIYHGKNFHS-STAQIPDGEQIGIILDRTNFYAEQGGQENDTGRIIIDGR 556
Query: 597 TQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+ +E+G++ G ++H G + SF + G E D R HT +H+L
Sbjct: 557 AE----LEVGDVQLYAGYVLHTGFMKYGSFSI--GDAVLCEYDELRRWPIRNNHTGTHIL 610
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
N ALRRVL QK V +++ DFS + ++ + +E+ + I V +
Sbjct: 611 NFALRRVLGDSVEQKGSLVAAEKLRFDFS-HKSAVTEKELEKIEEISTEYIRQNCDVYSQ 669
Query: 715 HMRASELPFLTHLTVIPGEIYPD-----------DVILIDISDKENV-ISREPCCGTHVF 762
+ + ++ + + GE YPD + IL ++ D + +S E C GTHV
Sbjct: 670 EVPLATARQISGVRAVFGETYPDPVRVVSVGVEVEEILKNVEDPRWLEVSIEFCGGTHVQ 729
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I+ ++ G+R I +TG+ +
Sbjct: 730 KTGDIKDLIILEENGIAKGIRRIIAVTGEDA 760
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 69/107 (64%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK++FLG A NSQKCIR GGKHNDL G+D
Sbjct: 38 VPLSDPTLLFTNAGMNQFKSIFLGTVDPQSDFAKLKSAVNSQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K DA R + E LTK L RLY T+
Sbjct: 98 SYHHTFFEMLGNWSFGDYFKEDAIRYSWELLTK-VYGLDPQRLYVTY 143
>gi|193656980|ref|XP_001950431.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon
pisum]
Length = 955
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 293/828 (35%), Positives = 412/828 (49%), Gaps = 102/828 (12%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
+K IR ++ +F + +GH V SS +VP D ++ F N+GM QFK +FLG A
Sbjct: 5 AKEIRDRYIKFFIDKKGHEYVYSSSVVPVDDPTLLFANAGMNQFKPIFLGTVAPSSDMAK 64
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
+ R N+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K + C+ A EFLT+
Sbjct: 65 WKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKTEICQWAWEFLTQE 124
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
L DRLY TYFGG + GL D E ++IWL+LG+ DHI MK NFWEMG TGPC
Sbjct: 125 -FKLSPDRLYVTYFGGDKKSGLEPDLECKNIWLKLGLAEDHIIPGNMKDNFWEMGETGPC 183
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G SEIHYD G +A VN D D++EIWN+VF+ + R T+ L K +ID G+G
Sbjct: 184 GPCSEIHYDRIGNRLAA-DLVNQDDPDVLEIWNLVFMQYNRNQEGTLHNLPKKHIDCGMG 242
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
FERLV+++Q+K S YDTDLF PL I+ + A PY + D +YR+L+D++R
Sbjct: 243 FERLVSVIQDKRSNYDTDLFQPLFVAIQNGTNAPPYEGKVGADDIDQKDMAYRVLADHAR 302
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
+T+AL+D PD T + LR ++R A+ + + K G L + ++LGD +P
Sbjct: 303 TLTIALSDGGSPDNTGRGYVLRRILRRAVRYATEKLNGKPG-FFATLVNVVVDLLGDTFP 361
Query: 366 EI-QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
EI +D I++I EE + L + N++ L L K
Sbjct: 362 EITKDPQQIIEIINEEEEQFLRTLSRGR-----------------NLLNRTILKLTDKV- 403
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKER 482
I G++A+ LYDTYG ++ + K T+ EA+E+ K +L +
Sbjct: 404 ------------IPGEVAWKLYDTYGFPVDLTYLMVEEKGFTIDMEAYEEAKKKAQLISQ 451
Query: 483 SKAKAASNVPDID---LMDL--KHFPVTDDKYKYDYHY--DTNSKRYTFPCLDTNLVGIV 535
+K V +D L DL K TDD KY+Y D YTF + ++ I
Sbjct: 452 NKVGGDKEVISLDVHALADLQTKGISTTDDSPKYNYKAVSDDADAEYTFETCTSTVLSIR 511
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG------ 589
+ +Q +D+ Q G+I DKT YA GGQI D G
Sbjct: 512 LINQFV-------------NEVDTFQE-----CGIILDKTCFYAEQGGQIYDQGSMVKDE 553
Query: 590 -VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA 648
+ N Q G G I+H G ++ S + G +++D + R M
Sbjct: 554 FTEFYVNNVQLRG-----------GYILHVG-ILESGSLKVGDKVVLKIDEKRRRFVMNN 601
Query: 649 HTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
HT +H LN LR VL QK V D+ DF+ L+ D VA VEK N+VI
Sbjct: 602 HTATHTLNHTLRVVLGDNLNQKGSLVAPDKLRFDFNNKA-ALTGDQVAKVEKLTNEVIKR 660
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISDKENV-ISREP 755
V + ++ + L + E YPD D +L D + S E
Sbjct: 661 NDTVYAKIAPLNDAKRIKGLRAMFDETYPDPVRVVSVGVTVDKLLTDPEGNSGLETSVEF 720
Query: 756 CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
C GTH+ TGH+E T++ ++ + G+R I +TG + A G+ L
Sbjct: 721 CGGTHLHKTGHMECFTILSEEAISKGIRRIVAVTGPEATKAYNRGEEL 768
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK +FLG A + R N+QKCIR GGKHNDL G+D
Sbjct: 31 VPVDDPTLLFANAGMNQFKPIFLGTVAPSSDMAKWKRAVNTQKCIRAGGKHNDLDDVGKD 90
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K + C+ A EFLT+ L DRLY T+
Sbjct: 91 VYHHTFFEMLGNWSFGDYFKTEICQWAWEFLTQ-EFKLSPDRLYVTY 136
>gi|334183197|ref|NP_001185186.1| Alanyl-tRNA synthetase [Arabidopsis thaliana]
gi|332194404|gb|AEE32525.1| Alanyl-tRNA synthetase [Arabidopsis thaliana]
Length = 963
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 273/812 (33%), Positives = 417/812 (51%), Gaps = 98/812 (12%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP- 66
S + +K +R +++D+F +GH SSP+VP+ D ++ F N+GM Q+K +FLG
Sbjct: 7 SETQWPAKRVRDTYVDFF-RGKGHKFWPSSPVVPHNDPTLLFANAGMNQYKPIFLGTADP 65
Query: 67 ----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMAL 122
+ R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A A
Sbjct: 66 NTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEWAW 125
Query: 123 EFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEM 182
E LTK LP DR+Y TYFGG ++ GL D E RDIWL++ +P + G K NFWEM
Sbjct: 126 ELLTKV-YGLPTDRIYATYFGGDEKAGLQPDNEARDIWLKV-LPSGRVLPFGCKDNFWEM 183
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
G TGPCG +EIHYD G +A + VN D +EIWN+VFI R S ++ PL +
Sbjct: 184 GDTGPCGPCTEIHYDRIGNRDAA-SLVNNDDPTCLEIWNLVFIQFNRESDGSLKPLPAKH 242
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRM 302
+DTG+GFERL ++LQNK S YDTD+F+P+ + I+K +GA+PY + +D +YR+
Sbjct: 243 VDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVGPEDVDRVDMAYRV 302
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI 359
++D+ R ++ A+AD P + LR ++R A+ +++ K ++G L ++ +
Sbjct: 303 VADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGKEILKAEEG-FFNGLVSSVIRV 361
Query: 360 LGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
+GDV+ E+++ KI I+ EE F K L K +E+F
Sbjct: 362 MGDVFTELKEHEKKITDIIKEEEASF----------CKTLAKG---IEKF---------- 398
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
++ + +SGD AF L+DTYG ++ Q +A + L + + F + + E
Sbjct: 399 ------RKAGQAVQGNTLSGDDAFILWDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEA 452
Query: 480 KERS-----KAKAASNVPDIDLMDLKH---FPVTDDKYKYDYHYDTNSKRYTFPCLDTNL 531
+ERS K + V D D H TDD +KY + D S+ L
Sbjct: 453 RERSRSAQNKQAGGAIVMDADATSTLHKAGVSATDDSFKYIWFQDHESE----------L 502
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
I G S A+ D+ VGL+ T+ YA GGQI D G+
Sbjct: 503 KAIYTGSTFL----------ESSAASDN--------VGLVLGSTSFYAEQGGQIFDTGLI 544
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ T V+I G ++H G + + +V+ G +VD R HT
Sbjct: 545 EGSFGTFNVCNVQI-----FGGFVLHIGYLSKETGEVSVGDKVICKVDYERRKLIAPNHT 599
Query: 651 TSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H+LN AL+ VL QK V ++ DFS +G+ + + + +E +N I +++
Sbjct: 600 CTHMLNYALKEVLGDHIDQKGSIVLPEKLRFDFS-HGKPVDPEDLRRIESIVNKQIKDEL 658
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKEN----VISREPCC 757
V + SE + L + GE+YPD V ++ I +D EN ++S E C
Sbjct: 659 DVFSKEAVLSEAKRIKGLRAVFGEVYPDPVRVVSIGRKVEDLLADPENNEWSLLSSEFCG 718
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLT 789
GTH+ NT ++ ++ + G+R + +T
Sbjct: 719 GTHITNTREAKAFALLSEEGIAKGIRRVTAVT 750
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + R N+QKCIR GGKHNDL G+D
Sbjct: 38 VPHNDPTLLFANAGMNQYKPIFLGTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A A E LTK LP DR+Y T+
Sbjct: 98 TYHHTFFEMLGNWSFGDYFKKEAIEWAWELLTK-VYGLPTDRIYATY 143
>gi|194039401|ref|XP_001929628.1| PREDICTED: alanyl-tRNA synthetase, mitochondrial [Sus scrofa]
Length = 985
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 271/818 (33%), Positives = 409/818 (50%), Gaps = 86/818 (10%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----AP 68
+ ++R +FL +F + GH LV S+ + P GD ++ FVN+GM QFK +FLG + P A
Sbjct: 39 AAAVRDAFLSFFRDRHGHRLVPSASVRPRGDPTLLFVNAGMNQFKPIFLGTVDPRSEMAG 98
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSF-NDYYKRDACRMALEFLTK 127
+ RVANSQKCVR GG+HNDL G+D HHTFFEMLGNW+F +Y+K +AC MA E LT+
Sbjct: 99 FRRVANSQKCVRAGGRHNDLEDVGQDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ 158
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
+P DRL+ +YFGG + GL D E+RDIWL LGVP + G + NFWEMG TGP
Sbjct: 159 -VYGIPEDRLWVSYFGGDPKAGLGADLESRDIWLNLGVPASRVLSFGPQENFWEMGDTGP 217
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG +EIHYD+ G L+E+WN+VF+ H R + ++ PL + ++DTG+
Sbjct: 218 CGPCTEIHYDLAG---------GVGAPQLVELWNLVFMQHNREADGSLQPLPQRHVDTGM 268
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ERLV +LQ K STYDTDLF PLL I + GA PY ++ +DT+YR+++D+
Sbjct: 269 GLERLVAVLQGKHSTYDTDLFSPLLNAIHQGCGAPPYSGRVGAADEGHIDTAYRVVADHI 328
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +++ +AD + P + +R ++R A+ S +V + G + L + E LG Y
Sbjct: 329 RTLSICIADGVSPGMSGAPLIVRRILRRAVRFSTEVLRAPPG-FLGSLVPVVVETLGGAY 387
Query: 365 PEI-QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
PE+ ++S + L+ +E+ +L++ + + +T L ++ P V
Sbjct: 388 PELHKNSAQIVSLVSEDEAAFLASLQRGR----RIIERTLKRLGPSDVF--PAEVAWSLS 441
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L+ L + E+ + D+ GL++ L E + + + +
Sbjct: 442 LSGNLGLPLDLVELMLEEKGVQLDSAGLAR-------------LAQEEAQHRAQQAEPVQ 488
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+ +V + + + P TDD KY Y S Y F + ++ Q++
Sbjct: 489 EQGLRLDVHALGELQRRGVPPTDDSPKYSYSLRP-SGGYEFSTCEARVL------QLYAE 541
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
D A+ G GL+ D+TN YA GGQ D G YL Q++
Sbjct: 542 DGRAVATTGEGQRY-----------GLLLDRTNFYAEQGGQASDRG--YLVRVEQQDVLF 588
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
+ + G I+H VV+ + G ++ VD RL CM HT +HLLN ALR+ L
Sbjct: 589 PVAQAQVCGGFILH--EVVAPECLKVGDRVQLHVDEAWRLSCMEKHTAAHLLNWALRKAL 646
Query: 664 TCTYQKSCRVFSDECALDFSVYGET-LSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
+ ++ S E L F V + L+ + AVE + + + V +M L
Sbjct: 647 GPSTEQRGSHLSPE-RLRFDVATQAPLTPKQLQAVEDTVQEAVGRDEAV---YMEEVALA 702
Query: 723 FLTHLTVIPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGH 766
TH +PG E+YPD V L S S E CCGTH+ TG
Sbjct: 703 RTTH---VPGLRSLDEVYPDPVRVVSVGVPVAHALEPASQAALQTSVELCCGTHLLRTGA 759
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
I ++G + G + +TG+ ++ A E G+ L+
Sbjct: 760 IGDLVIVGERQLAKGTTRLLAITGEQARQAREVGQSLA 797
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 76/107 (71%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD ++ FVN+GM QFK +FLG + P A + RVANSQKC+R GG+HNDL G+D
Sbjct: 66 PRGDPTLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGQDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P DRL+ ++
Sbjct: 126 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPEDRLWVSY 171
>gi|301757306|ref|XP_002914501.1| PREDICTED: LOW QUALITY PROTEIN: probable alanyl-tRNA synthetase,
mitochondrial-like [Ailuropoda melanoleuca]
Length = 984
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 280/818 (34%), Positives = 413/818 (50%), Gaps = 86/818 (10%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----AP 68
++++R +FL++F + GH LV S+ + P GD S+ FVN+GM QFK +FLG + P A
Sbjct: 39 ARAVRDAFLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVNPRSEMAG 98
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN-DYYKRDACRMALEFLTK 127
+ RVANSQKCVR GG+H+DL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+
Sbjct: 99 FRRVANSQKCVRAGGRHSDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ 158
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
+P DRL+ +YFGG + GL D E+RDIWL LGV H+ G + NFWEMG TGP
Sbjct: 159 V-YGIPEDRLWVSYFGGDPKAGLDPDLESRDIWLSLGVRDSHVLSFGPEENFWEMGDTGP 217
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG +EIHYD+ G RV A + L+E+WN+VFI H R + ++ PL + ++DTG+
Sbjct: 218 CGPCTEIHYDLAG-------RVGAPQ--LVELWNLVFIQHNREADGSLQPLPQRHVDTGM 268
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ERLV +LQ STYDTDLF PLL+ I + A PY ++ D +YR+++D+
Sbjct: 269 GLERLVAVLQGTRSTYDTDLFSPLLKAIHQGCRAPPYLGRVGAADEGRTDMAYRVVADHI 328
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++V +AD ++P + LR ++R A+ S +V + G + L + E LGD Y
Sbjct: 329 RTLSVCIADGVYPGMSGAPLVLRRILRRAVRFSTEVLRAPPG-FLGSLVPVVVETLGDAY 387
Query: 365 PEIQDSINKIQLILGE-ESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
PE+Q + +I ++ E E+ +L++ + L + P E F P V
Sbjct: 388 PELQKNSAQIAHLVSEDEAAFLASLQRGRQIIDRTLRRLGPS-ELF-----PAEVAWSLS 441
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L L + E+ + D+ GL++ L E + + + +
Sbjct: 442 LAGNLGLPLDLLELMLEEKGVQLDSAGLAR-------------LAQEEAQHRSQQSEPVQ 488
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+ NV + + + P TDD KY+Y S Y F + ++ Q++
Sbjct: 489 EQGLQLNVHALGELQRRGVPPTDDSPKYNYSLRP-SGGYEFSACEAQVL------QLYTE 541
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
D A+ AS+ Q GL+ DKTN YA GGQ D G YL QE+
Sbjct: 542 DGTAV------ASVGKGQR-----CGLLLDKTNFYAEQGGQASDRG--YLVRVGQEDVLF 588
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
+ + G I+H KV G ++ VD RL CM HT +HLL+ ALR+ L
Sbjct: 589 PVAQAQVCGGFILHEAVAPEGLKV--GDQVQLHVDEAWRLRCMEKHTATHLLSWALRQTL 646
Query: 664 TC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
T Q+ + + D + L+ + + AVE + D + V +M L
Sbjct: 647 GPHTEQRGSHLSPERLRFDVATQA-PLTPEQLRAVEGTVQDAVGQDEPV---YMEDVALA 702
Query: 723 FLTHLTVIPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGH 766
H +PG E+YPD V L S S E CCGTH+ TG
Sbjct: 703 LTAH---VPGLRSLDEVYPDPVRVVSVGVPVARALDPASQAALRTSVELCCGTHLLRTGA 759
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
+ ++G + G + +TG+ ++ A E G++L+
Sbjct: 760 VGDLVIVGERQLTKGTTRLLAVTGEQAQQAREVGQNLA 797
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 76/107 (71%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG + P A + RVANSQKC+R GG+H+DL GRD
Sbjct: 66 PRGDPSLLFVNAGMNQFKPIFLGTVNPRSEMAGFRRVANSQKCVRAGGRHSDLEDVGRDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P DRL+ ++
Sbjct: 126 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPEDRLWVSY 171
>gi|281345697|gb|EFB21281.1| hypothetical protein PANDA_002397 [Ailuropoda melanoleuca]
Length = 974
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 280/818 (34%), Positives = 413/818 (50%), Gaps = 86/818 (10%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----AP 68
++++R +FL++F + GH LV S+ + P GD S+ FVN+GM QFK +FLG + P A
Sbjct: 39 ARAVRDAFLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVNPRSEMAG 98
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN-DYYKRDACRMALEFLTK 127
+ RVANSQKCVR GG+H+DL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+
Sbjct: 99 FRRVANSQKCVRAGGRHSDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ 158
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
+P DRL+ +YFGG + GL D E+RDIWL LGV H+ G + NFWEMG TGP
Sbjct: 159 V-YGIPEDRLWVSYFGGDPKAGLDPDLESRDIWLSLGVRDSHVLSFGPEENFWEMGDTGP 217
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG +EIHYD+ G RV A + L+E+WN+VFI H R + ++ PL + ++DTG+
Sbjct: 218 CGPCTEIHYDLAG-------RVGAPQ--LVELWNLVFIQHNREADGSLQPLPQRHVDTGM 268
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ERLV +LQ STYDTDLF PLL+ I + A PY ++ D +YR+++D+
Sbjct: 269 GLERLVAVLQGTRSTYDTDLFSPLLKAIHQGCRAPPYLGRVGAADEGRTDMAYRVVADHI 328
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++V +AD ++P + LR ++R A+ S +V + G + L + E LGD Y
Sbjct: 329 RTLSVCIADGVYPGMSGAPLVLRRILRRAVRFSTEVLRAPPG-FLGSLVPVVVETLGDAY 387
Query: 365 PEIQDSINKIQLILGE-ESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
PE+Q + +I ++ E E+ +L++ + L + P E F P V
Sbjct: 388 PELQKNSAQIAHLVSEDEAAFLASLQRGRQIIDRTLRRLGPS-ELF-----PAEVAWSLS 441
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L L + E+ + D+ GL++ L E + + + +
Sbjct: 442 LAGNLGLPLDLLELMLEEKGVQLDSAGLAR-------------LAQEEAQHRSQQSEPVQ 488
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+ NV + + + P TDD KY+Y S Y F + ++ Q++
Sbjct: 489 EQGLQLNVHALGELQRRGVPPTDDSPKYNYSLRP-SGGYEFSACEAQVL------QLYTE 541
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
D A+ AS+ Q GL+ DKTN YA GGQ D G YL QE+
Sbjct: 542 DGTAV------ASVGKGQR-----CGLLLDKTNFYAEQGGQASDRG--YLVRVGQEDVLF 588
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
+ + G I+H KV G ++ VD RL CM HT +HLL+ ALR+ L
Sbjct: 589 PVAQAQVCGGFILHEAVAPEGLKV--GDQVQLHVDEAWRLRCMEKHTATHLLSWALRQTL 646
Query: 664 TC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
T Q+ + + D + L+ + + AVE + D + V +M L
Sbjct: 647 GPHTEQRGSHLSPERLRFDVATQA-PLTPEQLRAVEGTVQDAVGQDEPV---YMEDVALA 702
Query: 723 FLTHLTVIPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGH 766
H +PG E+YPD V L S S E CCGTH+ TG
Sbjct: 703 LTAH---VPGLRSLDEVYPDPVRVVSVGVPVARALDPASQAALRTSVELCCGTHLLRTGA 759
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
+ ++G + G + +TG+ ++ A E G++L+
Sbjct: 760 VGDLVIVGERQLTKGTTRLLAVTGEQAQQAREVGQNLA 797
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 76/107 (71%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG + P A + RVANSQKC+R GG+H+DL GRD
Sbjct: 66 PRGDPSLLFVNAGMNQFKPIFLGTVNPRSEMAGFRRVANSQKCVRAGGRHSDLEDVGRDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P DRL+ ++
Sbjct: 126 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPEDRLWVSY 171
>gi|398397461|ref|XP_003852188.1| alanine--tRNA ligase [Zymoseptoria tritici IPO323]
gi|339472069|gb|EGP87164.1| hypothetical protein MYCGRDRAFT_100210 [Zymoseptoria tritici
IPO323]
Length = 960
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 275/812 (33%), Positives = 409/812 (50%), Gaps = 100/812 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+RS+F+DYF GHT V S +VP D ++ F N+GM Q+K++FLG A R
Sbjct: 16 VRSTFIDYF-KQNGHTFVPSGSVVPLSDPTLLFTNAGMNQYKSIFLGTVDPDSDFAKLKR 74
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
ANSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + + LTK
Sbjct: 75 AANSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAITFSWDLLTKV-YG 133
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +RLY TYF G GL D E RD+WL+ GVP DHI MK NFWEMG GPCG
Sbjct: 134 LKPERLYVTYFEGKADAGLEPDLEARDLWLKAGVPEDHILTGDMKDNFWEMGDQGPCGPC 193
Query: 192 SEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIHYD + G +S L VN D ++IEIWN VFI + R ++ L +IDTG+GFE
Sbjct: 194 SEIHYDRIGGRNASDL--VNQDDPNVIEIWNNVFIQYNREPDKSLKSLPNKHIDTGMGFE 251
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV+ILQ+K+S YDTD+F PL +TI++++GA+ Y TF + +DT+YR+++D+ R++
Sbjct: 252 RLVSILQDKSSNYDTDVFTPLFKTIQEITGAREYRGTFGEEDADGVDTAYRVVADHVRLL 311
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
T A+ D P+ + +R V+R + F + G ++ + +GD++PEI
Sbjct: 312 TFAITDGGIPNNVGRGYVVRRVLRRGARYARKYFNTEIGDFFSKIVPTLVAQMGDMFPEI 371
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ ++ IL EE F K L + + E++ +
Sbjct: 372 KKKEADVKEILNEEELSF----------AKTLDRGEAMFEKY----------------AE 405
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
+ E+SG + LYDTYG ++ + +A + L + E ++ + +E SK +
Sbjct: 406 QCKAKGAKEMSGADVWRLYDTYGFPVDLTKLMAEERGLDINEEDVKEAQEKAREASKGEK 465
Query: 488 AS-------NVPDID-LMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+ NV DI+ L ++ P TDD K+ Q
Sbjct: 466 KAGAELVKLNVHDINALAKMEDVPKTDDSPKF---------------------------Q 498
Query: 540 VFCIDKH--AIRHARSGASIDSI-QLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
I H AI H G + S ++ G++ D+TN YA GGQ +D G +
Sbjct: 499 KANIKAHIKAIYHG--GKFVQSTSEVPEGEQFGVVLDRTNFYAEQGGQENDTGRILIDGE 556
Query: 597 TQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+ +++ + G ++H G + S K+ + E D R HT +H+L
Sbjct: 557 AE----IDVQNVQLYAGYVMHTGYMNYGSLKINDEIL--CEYDELRRQPIRNNHTGTHIL 610
Query: 656 NAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
N ALR VL QK V ++ DFS + +S D + +E+ I +V +
Sbjct: 611 NFALREVLGDDINQKGSLVAPEKLRFDFS-HKSGVSDDELLKIEELTTSYIRQNSEVYAK 669
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKEN----VISREPCCGTHVF 762
+ + ++ + + GE YPD V ++ I D +N +S E C GTHV
Sbjct: 670 DVSLATAREISGVRAVFGETYPDPVRVVSIGVPVEDLLEDPKNNDWTKVSVEFCGGTHVK 729
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSK 794
NT I+ V+ G+R I C+TG +++
Sbjct: 730 NTTEIKDLVVLEESGIAKGIRRIVCVTGQTAQ 761
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R ANSQKCIR GGKHNDL G+D
Sbjct: 38 VPLSDPTLLFTNAGMNQYKSIFLGTVDPDSDFAKLKRAANSQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + + LTK L +RLY T+
Sbjct: 98 SYHHTFFEMLGNWSFGDYFKKEAITFSWDLLTK-VYGLKPERLYVTY 143
>gi|328858383|gb|EGG07496.1| hypothetical protein MELLADRAFT_48072 [Melampsora larici-populina
98AG31]
Length = 966
Score = 421 bits (1082), Expect = e-114, Method: Compositional matrix adjust.
Identities = 270/821 (32%), Positives = 405/821 (49%), Gaps = 73/821 (8%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLT 65
+S + +K +R +F++YF H V SS + P D ++ F N+GM Q+K++FLG
Sbjct: 10 VSQFGDWPAKKVRKTFINYFQEKYQHQFVPSSSVCPLDDPTLLFTNAGMNQYKSIFLGTI 69
Query: 66 PAPYP-----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
P R NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K D +M
Sbjct: 70 DPSNPLSKIKRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEDGLKM 129
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
A E LT+ LP DRLY TYF G ++ GL D E++ IWLELGV DHI K NFW
Sbjct: 130 AWELLTEL-YGLPKDRLYVTYFEGDEKQGLEPDLESKRIWLELGVQEDHILPGNAKDNFW 188
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG+TGPCG SEIHYD G +A + VN D +IEIWN VFI + R S ++ L
Sbjct: 189 EMGATGPCGPCSEIHYDRVG-GRNAGSLVNQDDPLVIEIWNNVFIEYNRESDGSLKELPS 247
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
++DTG+GFERLV+ILQ+K S YDTD+F P+ E I++++GA+PY ++ +DT+Y
Sbjct: 248 KHVDTGMGFERLVSILQDKKSNYDTDIFRPIFEKIQQLTGARPYEGKLGIEDQDGIDTAY 307
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+++D+ R +T A++D P+ + LR ++R F V G +L +
Sbjct: 308 RVVADHIRTLTFAISDGGVPNNVGRGYVLRRILRRGARYIRKKFNVPIGTFFSKLMPTLI 367
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
E +GD +PEI+ ++ IL EE + F++ + G
Sbjct: 368 EQMGDEFPEIEKRRLEVIEILNEEE------------------------DSFSLTLDRGE 403
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
+ KY + + + + G + LYDT+G ++ +A + + + FE +
Sbjct: 404 KIFEKYCNRVKKNNGKV--LDGKEVWKLYDTFGFPIDLTLLMAEEAGIGIDQDGFEIAQS 461
Query: 478 ELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
E KE SK V +D+ V + D S +++ ++ + I
Sbjct: 462 ESKELSKGGKKKIVGAGVELDVHSIAVLESNSSVPKTDD--SSKFSLTTINATVKAIFQA 519
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
+ + K +L+ G+I DKTN YA GGQ +D G +
Sbjct: 520 GEFYSSSK---------------ELKSGEPFGVILDKTNFYAEQGGQENDTGTLIIEGEM 564
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
++ ++ G ++H GN +S ++ + D R HT +H+LN
Sbjct: 565 I----FDVEDVQVFNGYVLHIGN-LSEGEIKKEDLVQSSFDELRRKPIKNNHTGTHILNY 619
Query: 658 ALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR L QK V S++ DFS + + + + +EK ND I V + M
Sbjct: 620 ALRETLGDHIDQKGSLVSSNKFRFDFS-HKQQVKASELEQIEKICNDWILKNHSVYSKEM 678
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDI--------SDKENV-----ISREPCCGTHVFN 763
+ SE + L + GE YPD V ++ I +D+ N S E C GTHV
Sbjct: 679 KLSEAEKIPGLRAVFGERYPDPVRVVVIGPEPIELDADQLNESKWLNYSVEFCGGTHVKK 738
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
T I+ ++ G+R I +TG+ +K +E L+
Sbjct: 739 TNEIKELILVEESGIAKGIRRIVAVTGEEAKTVIELANELN 779
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRDS 873
P D ++ F N+GM Q+K++FLG P R NSQKCIR GGKHNDL G+D+
Sbjct: 45 PLDDPTLLFTNAGMNQYKSIFLGTIDPSNPLSKIKRAVNSQKCIRAGGKHNDLDDVGKDT 104
Query: 874 YHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K D +MA E LT+ LP DRLY T+
Sbjct: 105 YHHTFFEMLGNWSFGDYFKEDGLKMAWELLTE-LYGLPKDRLYVTY 149
>gi|225683316|gb|EEH21600.1| alanyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
Length = 962
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 280/819 (34%), Positives = 416/819 (50%), Gaps = 92/819 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R++FLD+F + GHT V SS +VP D ++ F N+GM Q+K +FLG A R
Sbjct: 17 VRNAFLDFFKDN-GHTFVPSSSVVPLSDPTLLFANAGMNQYKAIFLGTVEPNSDFAQLKR 75
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
N+QKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A R + + LTK
Sbjct: 76 AHNTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIRYSWDLLTKV-YG 134
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYF G+ G+ D E RD+WL +GV DH+ MK NFWEMG GPCG
Sbjct: 135 LDPDRLYVTYFEGNPDAGIEPDLEARDLWLSVGVAEDHLLSGNMKDNFWEMGEQGPCGPC 194
Query: 192 SEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIHYD + G +S L VN D +++EIWN VFI + R ++ PL ++DTG+G+E
Sbjct: 195 SEIHYDRIGGRNASHL--VNQDDPNVLEIWNNVFIQYNREQDKSLRPLPNKHVDTGMGYE 252
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV+ILQNKTS YDTD+F PL E I +++G++PY F + +DT+YR+++D+ R +
Sbjct: 253 RLVSILQNKTSNYDTDVFTPLFEKIREITGSRPYTGKFHEEDVDGVDTAYRVVADHIRTL 312
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
T A++D P+ + +R V+R + V+ G ++ + E +GD++PEI
Sbjct: 313 TFAISDGAVPNNEGRGYVVRRVLRRGARYARKYLNVEIGGFFSQIVPTLVEQMGDMFPEI 372
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ + IL EE F K L + + E++ +
Sbjct: 373 KRKATDVMEILDEEEISFA----------KTLDRGERLFEEYALQ--------------- 407
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK--A 485
A+ + + G + LYDT+G ++ Q +A + L + + FE+ KE SK
Sbjct: 408 -AKQKGLDRLHGADVWRLYDTFGFPVDLTQLMAEERGLKIDNGEFEEARLRAKEASKGQG 466
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
K +V + + DL DD K D +S ++ + + +
Sbjct: 467 KLTKDVVKLTVHDLGLLETMDDVPKTD-----DSAKFGRGNITSQI-------------- 507
Query: 546 HAIRHARSGASIDSIQ-LEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
AI H + +DS + + G+I D+TN YA GGQ D G + +GK E
Sbjct: 508 KAIYHNKK--FVDSSKGIPEGEQFGIILDRTNFYAEQGGQEYDTGKIII------DGKAE 559
Query: 605 IG--ELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+ ++ G ++H G + SF V + + E D R HT +H+LN ALR+
Sbjct: 560 LAVEDVQVYGGYVLHTGFMKYGSFNVNDSVIA--EYDELRRWPIRNNHTGTHILNFALRK 617
Query: 662 VL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL QK V +++ DFS + +S + +E+ D I V + + S
Sbjct: 618 VLGDGVEQKGSLVAAEKLRFDFS-HKSAVSDSDLEEIERISTDYIRQNCAVYGKDVPLSI 676
Query: 721 LPFLTHLTVIPGEIYPDDV-----------ILIDISD-KENVISREPCCGTHVFNTGHIE 768
+T + + GE YPD V IL D+ D + IS E C GTHV TG I+
Sbjct: 677 AREITGVRAVFGETYPDPVRVVSVGVELEEILKDVHDPRWKEISIEFCGGTHVQKTGDIK 736
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHL 803
++ G+R I +TG+ + + A E G+ L
Sbjct: 737 DLVILEESGIAKGIRRIIAVTGEEAHEVQRIAKEFGERL 775
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K +FLG A R N+QKCIR GGKHNDL G+D
Sbjct: 39 VPLSDPTLLFANAGMNQYKAIFLGTVEPNSDFAQLKRAHNTQKCIRAGGKHNDLDDVGKD 98
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A R + + LTK L DRLY T+
Sbjct: 99 SYHHTFFEMLGNWSFGDYFKKEAIRYSWDLLTK-VYGLDPDRLYVTY 144
>gi|388583424|gb|EIM23726.1| hypothetical protein WALSEDRAFT_31222 [Wallemia sebi CBS 633.66]
Length = 946
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 283/831 (34%), Positives = 407/831 (48%), Gaps = 99/831 (11%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
+K +RS+++DYF HT V SS +PY D ++ F N+GM Q+K++FLG
Sbjct: 5 TAKRVRSTYIDYFKQQHAHTFVPSSSSIPYEDPTLLFANAGMNQYKSIFLGTVDKNSQFG 64
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
R NSQKCVR GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A MA + L
Sbjct: 65 QLKRAVNSQKCVRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEMAWKLLVD 124
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
LP D+LY TYF G + GL D E RDIW LG+P DHI NFWEMG+TGP
Sbjct: 125 V-YKLPADQLYVTYFEGDPKQGLEPDYEARDIWRSLGLPDDHILTGDATDNFWEMGATGP 183
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIH+D G ++A VNAD ++IEIWN VF+ R + ++ PL +IDTGL
Sbjct: 184 CGPCSEIHFDRIGGRNAAHI-VNADDPNVIEIWNNVFMQFNREADGSLRPLPAKHIDTGL 242
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV+ILQNK S YDTD+F P+ E I++++ A+PY T + +DT+YR+++D+
Sbjct: 243 GFERLVSILQNKPSNYDTDVFTPIFEKIQQMTKARPYAGTLGAEDVDGIDTAYRVIADHV 302
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T+ ++D P+ + LR ++R + F V G L+ + E +GD++
Sbjct: 303 RTLTITISDGGVPNNVGRGYVLRRILRRGCRYARKKFGVPIGSFFSTLAPVVIEQMGDMF 362
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI + I+ IL EE E F+ + G L Y
Sbjct: 363 PEITKKYDDIKEILDEEE------------------------ESFSRTLDRGEKLFDSYA 398
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
K L + ++ G + LYDTYG ++ +A LT+ E FE+ E E SK
Sbjct: 399 QKTL--NTPEKQLGGKEVWRLYDTYGFPVDLTVLMAEELGLTINMEEFEKARIESHEASK 456
Query: 485 AKAAS--------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+V D+ ++ + TDD YK YT +D ++ I
Sbjct: 457 GTKKKGDVESVKFDVHDLAALEKDNIAKTDDIYK-----------YTHGTVDAKIISI-F 504
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
D+ F I ++ G++ DKTN YA +GGQ D G+ +
Sbjct: 505 QDRQFHKSTKDINTSKP--------------FGILLDKTNFYAESGGQEYDTGMITI--- 547
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPG---LTSRV--EVDARMRLGCMRAHTT 651
+GK + ++E V+ G V+ S + G L V D R HT
Sbjct: 548 ---DGKADF----AVEDVQVYSGYVLHSGALKYGELNLNDDVIATYDELRRWPIKNNHTG 600
Query: 652 SHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ 710
+HLLN AL+ VL QK V + DF+ + LSV + VE + I V
Sbjct: 601 THLLNFALKEVLGDHIDQKGSLVAPTKLRFDFN-HKAGLSVAELNKVEDLCDQFIKRNVP 659
Query: 711 VDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCG 758
V + + + L + GE+YPD V ++ + ++K + S E C G
Sbjct: 660 VFSQEFNLDDARKIPGLRAVFGEVYPDPVRVVSVEFNPQDIKHDIENEKWSKSSIEFCGG 719
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASF 809
THV TG I+ ++ S G+R I +T D + + L+ +F
Sbjct: 720 THVNTTGEIKLFKIVEESSIAKGIRRIIAVTADDAVEVMRKSSELANKLAF 770
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 72/108 (66%), Gaps = 6/108 (5%)
Query: 817 NIPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGR 871
+IPY D ++ F N+GM Q+K++FLG R NSQKC+R GGKHNDL G+
Sbjct: 31 SIPYEDPTLLFANAGMNQYKSIFLGTVDKNSQFGQLKRAVNSQKCVRAGGKHNDLDDVGK 90
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
D+YHHTFFEMLGNWSF DY+K++A MA + L LP D+LY T+
Sbjct: 91 DTYHHTFFEMLGNWSFGDYFKKEAIEMAWKLLVD-VYKLPADQLYVTY 137
>gi|313471806|sp|Q5AQL1.2|SYA_EMENI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|259486703|tpe|CBF84773.1| TPA: alanyl-tRNA synthetase, putative (AFU_orthologue;
AFUA_8G03880) [Aspergillus nidulans FGSC A4]
Length = 961
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 275/819 (33%), Positives = 415/819 (50%), Gaps = 92/819 (11%)
Query: 5 NISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG- 63
N+ S + SK +R +FL YF +GHT V SSP+ P D ++ F N+GM QFK++FLG
Sbjct: 4 NLQSQPKWTSKLVRDTFLQYF-QGKGHTFVASSPVAPLSDPTLLFTNAGMNQFKSIFLGT 62
Query: 64 LTP----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACR 119
+ P A NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A +
Sbjct: 63 VNPNSDFAQLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIQ 122
Query: 120 MALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNF 179
+ E LT+ L RLY TYF G+ + GL D E + +W +GVP DHI MK NF
Sbjct: 123 YSWELLTQV-YGLDPGRLYVTYFEGNKEGGLQPDLEAKALWKAVGVPEDHILPGNMKDNF 181
Query: 180 WEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLS 239
WEMG GPCG SEIHYD G ++A + VN D +++EIWN VFI + R + ++ L
Sbjct: 182 WEMGDQGPCGPCSEIHYDRIGGRNAA-SLVNQDDPNVLEIWNNVFIQYNRENDGSLRSLP 240
Query: 240 KNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTS 299
++DTG+GFERLV++LQ+K+S YDTD+F P+ +TI+ ++GA+ Y F T + +DT+
Sbjct: 241 NKHVDTGMGFERLVSVLQDKSSNYDTDVFGPIFQTIQVITGAREYQGRFGTDDSDGIDTA 300
Query: 300 YRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNI 356
YR+++D+ R + A++D + P+ + +R V+R + F V+ G ++ +
Sbjct: 301 YRVVADHVRTLMFAISDGVVPNNEGRGYVIRRVLRRGARYARKYFNVEIGSFFSKIVPTV 360
Query: 357 AEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
E LGD++PE++ + IL EE F K L + + + EQ+
Sbjct: 361 VEQLGDMFPELKQKQQDVIEILNEEEISFA----------KTLDRGERQFEQY------- 403
Query: 417 LVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKL 476
Q A+ ++ G + LYDT+G ++ + +A + L + FE+
Sbjct: 404 ---------AQQAKTAGDHKLHGADVWRLYDTFGFPVDLTRIMAEERGLEIDDRQFEEAR 454
Query: 477 NELKERSKA--KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLD 528
++ KE SK K + +D+ DL P TDD K++
Sbjct: 455 HKAKEASKGQKKTTTGSVKLDVHDLGKLEKMNGVPKTDDSAKFE---------------- 498
Query: 529 TNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI 588
IG+ I AI H ++ S + L+ + +G+I D+TN YA GGQ +D
Sbjct: 499 -------IGNVTAQI--KAIYHGKTFHS-STQNLDDSEQIGIILDRTNFYAEQGGQENDT 548
Query: 589 GVAYLTNTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMR 647
G + + +E+ ++ G ++H G + SFKV T E D R
Sbjct: 549 GRIVIDGQAE----LEVVDVQQYAGYVLHTGYMKYGSFKVDD--TVICEYDELRRWPIRN 602
Query: 648 AHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIA 706
HT +H+LN ALR VL QK V +++ DFS V+ V +E I
Sbjct: 603 NHTGTHILNFALRGVLGDGIEQKGSLVSAEKLRFDFSHKSPVTDVELV-KIEDLSTQYIR 661
Query: 707 NQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVI------------SRE 754
V + + S + + + GE YPD V ++ + + + I S E
Sbjct: 662 RNCLVYSKEVPLSIARNIAGVRAVFGETYPDPVRVVSVGAELDEILKNVEDPRWADFSIE 721
Query: 755 PCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
C GTHV TG I+ ++ G+R I +TG+ +
Sbjct: 722 FCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDA 760
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P D ++ F N+GM QFK++FLG + P A NSQKCIR GGKHNDL G+DS
Sbjct: 39 PLSDPTLLFTNAGMNQFKSIFLGTVNPNSDFAQLKSAVNSQKCIRAGGKHNDLDDVGKDS 98
Query: 874 YHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++A + + E LT+ L RLY T+
Sbjct: 99 YHHTFFEMLGNWSFGDYFKKEAIQYSWELLTQ-VYGLDPGRLYVTY 143
>gi|449268815|gb|EMC79652.1| Alanyl-tRNA synthetase, cytoplasmic [Columba livia]
Length = 946
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 284/821 (34%), Positives = 407/821 (49%), Gaps = 118/821 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASQIRQRFIDFFKENE-HTYVHSSSTIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPL 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R N+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC++ALE LT
Sbjct: 64 AKLNRATNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKLALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K +P +RLY TYFGG++ GL D E + IWL LG+ I MK NFWEMG TG
Sbjct: 124 KE-FGIPTERLYVTYFGGNEAAGLQPDLECKQIWLNLGLAESRILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G+ A VN D +++EIWN+VFI R + T+ PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGD-RDASHLVNQDDPNVLEIWNLVFIQFNREADGTLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLFLP E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFLPYFEAIQKGTGARPYMGQVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+AL+D PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 302 ARTITLALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLNAPKG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEDQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L +++ + G SK I +E K L + E FE++ + +S
Sbjct: 393 LDRKI------------------QSLGDSKTIPEE----KGLVVDMEGFEEERKNAQLKS 430
Query: 484 KAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ K A D+ ++D+ + VTDD KY Y D+ S Y F +LV V
Sbjct: 431 QGKGAGG-EDLLMLDIYAIEELRSRGLEVTDDSPKYSYASDS-SGAYDF----GSLVATV 484
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
AIR + ++ G++ D+T YA GGQI D G +
Sbjct: 485 ----------KAIRREKKFVE----EVSTGQECGIVLDRTCFYAEQGGQIYDEGYMVKED 530
Query: 596 TTQENGKVE--IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
+E+ K E + + G ++H G + + KV G + +D R M HT +H
Sbjct: 531 DGRED-KTEFTVKNVQVRGGYVLHIGTLYGNLKV--GDQVCLSIDETRRRPVMSNHTATH 587
Query: 654 LLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
+LN ALR VL Q+ V D DF+ G LS + VE IANQ+ +
Sbjct: 588 ILNFALRSVLGEADQRGSLVAPDRLRFDFTAKG-ALSTQEIKKVEG-----IANQMIEEA 641
Query: 714 RHMRASELPF-----LTHLTVIPGEIYPDDVILIDI------------SDKENVISREPC 756
+ + A + P + L + E YPD V ++ I +V S E C
Sbjct: 642 KTVYAKDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGIPVEELLADPSGPAGSVTSVEFC 701
Query: 757 CGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
GTH+ N+ H ++ ++ G+R I +TG ++ A+
Sbjct: 702 GGTHLQNSSHAGPFVIVSEEAIAKGIRRIVAVTGAEARKAL 742
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R N+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKLNRATNTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC++ALE LTK +P +RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKLALELLTK-EFGIPTERLYVTY 137
>gi|315046056|ref|XP_003172403.1| alanyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
gi|311342789|gb|EFR01992.1| alanyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
Length = 970
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 285/834 (34%), Positives = 415/834 (49%), Gaps = 95/834 (11%)
Query: 4 PNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG 63
P V + +R +FLDYF GHT V SS +VP D ++ F N+GM Q+K++FLG
Sbjct: 10 PAGQETVEWPALRVRDTFLDYF-KKNGHTFVPSSSVVPLSDPTLLFANAGMNQYKSIFLG 68
Query: 64 LTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDAC 118
A R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 69 TVDPNSDFAQLKRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAI 128
Query: 119 RMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCN 178
+ + E LTK L DRLY TYF G++ G+ D E RDIW +GV DHI MK N
Sbjct: 129 QFSWELLTKV-YGLDPDRLYVTYFEGNEAAGVGPDIEARDIWRSVGVKDDHILTGDMKDN 187
Query: 179 FWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
FWEMG GPCG SEIHYD G ++A VN D D++EIWN VFI + R ++ PL
Sbjct: 188 FWEMGDQGPCGPCSEIHYDRIGGRNAAHL-VNQDDPDVLEIWNNVFIQYNREPDRSLRPL 246
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
++DTGLG+ERLV+ILQNK+S YDTD+F PL I+ ++GA+PY F + +DT
Sbjct: 247 PNQHVDTGLGYERLVSILQNKSSNYDTDVFSPLFAAIQNITGARPYTGNFGAQDVDGIDT 306
Query: 299 SYRMLSDYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYN 355
+YR+++D+ R +T A+ D P+ +R V+R + + +V+ G +L
Sbjct: 307 AYRVVADHLRTLTFAITDGAAPNNEGRGYVVRRVLRRGVRYARKYMQVEIGSFFSKLVPA 366
Query: 356 IAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
+ E +GD++PEI+ N + IL EE F K L + + + E +
Sbjct: 367 LVEQMGDMFPEIKRKQNDVMEILDEEEVSFA----------KTLDRGERQFETY------ 410
Query: 416 GLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQK 475
Q A D ++ G + LYDT+G ++ + +A ++LT+ FE+
Sbjct: 411 ----------AQQALDSGAGKLHGADVWRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEA 460
Query: 476 LNELKERSK--AKAASN-----VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLD 528
+ KE SK AKAAS+ V + ++ P T+D K+
Sbjct: 461 RLKAKEASKGQAKAASDLLKLTVHTLSTLEKNGVPKTNDDAKFGKG-------------- 506
Query: 529 TNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI 588
IV + C K I + + + +G+I DKTN YA GGQ D
Sbjct: 507 ----NIVANIKAICHGKEVIDSTKD--------IPADEQIGIILDKTNFYAEQGGQEYDT 554
Query: 589 GVAYLTNTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMR 647
G + + +++ + G ++H G + +F V + + E D R
Sbjct: 555 GKIVIDGQAE----LDVQNVQMYGGYVLHTGFIKYGNFSVNDSVIA--EYDELRRWPIRN 608
Query: 648 AHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIA 706
HT +H+LN ALR VL QK V +++ DFS + +S + +E D I
Sbjct: 609 NHTGTHILNFALREVLGDGIDQKGSLVAAEKLRFDFS-HKSAISDSDLEKIESMSTDYIR 667
Query: 707 NQVQVDRRHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISD-KENVISRE 754
V + + S +T + + GE YPD D IL ++ D + +S E
Sbjct: 668 QNCAVYSQEVPLSTAREITGVRAVFGETYPDPVRVVSVGVELDEILKNVKDPRWEAVSIE 727
Query: 755 PCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHLS 804
C GTHV TG I+ ++ G+R I +TG+ + + A E G+ L+
Sbjct: 728 FCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQRVAREFGERLN 781
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 45 VPLSDPTLLFANAGMNQYKSIFLGTVDPNSDFAQLKRAHNSQKCIRAGGKHNDLDDVGKD 104
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + + E LTK L DRLY T+
Sbjct: 105 SYHHTFFEMLGNWSFGDYFKKEAIQFSWELLTK-VYGLDPDRLYVTY 150
>gi|291228549|ref|XP_002734240.1| PREDICTED: alanyl-tRNA synthetase-like [Saccoglossus kowalevskii]
Length = 1016
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 266/815 (32%), Positives = 404/815 (49%), Gaps = 85/815 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTPAP-- 68
L S IR F+DYF Q H V SS ++P D ++ F N+GM QFK++F G + P+
Sbjct: 51 LTSGEIRRKFIDYFKEKQSHLFVPSSSVIPREDKTLLFTNAGMNQFKSIFQGAVDPSSPI 110
Query: 69 --YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
Y RV NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C MA + L
Sbjct: 111 VKYRRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKETCEMAWDLLI 170
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
L +RLY TYFGG+ Q GL D E R+IW +GV D I GM NFWEMG+ G
Sbjct: 171 NV-YGLSSNRLYVTYFGGNQQLGLSPDIECRNIWKNIGVAEDRILPYGMNENFWEMGTIG 229
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A + +N D ++E+WN+VFI + R + L ++ IDTG
Sbjct: 230 PCGMCSEIHYDRIGN-RNATSLINKDDPSVLELWNLVFIQYNREEDGCLSKLPQHNIDTG 288
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV+I+Q S YDTDLF PL++ I+K + PY S+ ++D +YR+L+D+
Sbjct: 289 MGLERLVSIIQGVDSNYDTDLFQPLIQEIQKCTSMPPYQGLVGDSDNENIDMAYRVLADH 348
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R +T+A+ D P + ++ ++R A+ + + G+ L + + LGD
Sbjct: 349 IRTLTIAITDGARPGNFKQSYIIKRLIRRAVRYATEKLNASPGQFAS-LVPIVVDTLGDA 407
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
YPE+ + ++ ++ E +F L+Q L G K+
Sbjct: 408 YPELLTNPQQVIDVINREEDLF--------------------LKQ--------LKKGRKF 439
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L K++++ + GD+A+ +YD +G ++ + K +++ E +E+ + + +
Sbjct: 440 LDKKISKLKEPRILPGDIAWKMYDGFGFPIDLTILMCNEKGVSVDMEGYEEVKEKTHQIT 499
Query: 484 KAKAASNVPDID-----LMDLKH--FPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
N + L LKH TDD YKY Y D + Y F + + + +
Sbjct: 500 SQGGIKNQLEYGFDTNALQQLKHQNISTTDDSYKYSYECDDDGN-YEFEVITAKITSLRV 558
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
G G ++S++ + + V I +T YA GGQ+ D G Y T
Sbjct: 559 G----------------GQFVESVEPDQSCDV--ILHQTCFYAEQGGQLWDDG--YFTKL 598
Query: 597 TQENGKV--EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E ++ E+ + G +VH G + V G ++ ++ RLG MR HT +H+
Sbjct: 599 GDEAQQIVFEVDNVQIYGGYVVHSGTTKKTLSV--GEQLKLHINEERRLGLMRNHTAAHI 656
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN +LR + Q+ V D DF+ Y ++L+ V ++ +N+VI VD
Sbjct: 657 LNWSLRHLHGDGIEQRGSLVAPDRLRFDFT-YEDSLTSLQVKEIQDQVNEVIEQYTPVDS 715
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHV 761
+ + E + L + GE+YPD V ++ + + P C GTHV
Sbjct: 716 QEVELDEAKQIEGLRAVFGEVYPDPVQVVSVGIPVTGLLTNPFGPGGFMSPVELCGGTHV 775
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
T HI +I + GVR I +TG A
Sbjct: 776 HMTEHIGKLVIIDEGKVSSGVRRITAITGSDGWEA 810
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK++F G + P+ Y RV NSQKCIR GGKHNDL G+D
Sbjct: 79 IPREDKTLLFTNAGMNQFKSIFQGAVDPSSPIVKYRRVVNSQKCIRAGGKHNDLDDVGKD 138
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C MA + L L +RLY T+
Sbjct: 139 VYHHTFFEMLGNWSFGDYFKKETCEMAWDLLIN-VYGLSSNRLYVTY 184
>gi|342320045|gb|EGU11988.1| Hypothetical Protein RTG_01868 [Rhodotorula glutinis ATCC 204091]
Length = 957
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 283/830 (34%), Positives = 406/830 (48%), Gaps = 94/830 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----R 71
+R +FLDYF GH+ VKSS +PY D ++ F N+GM Q+K++FLG P R
Sbjct: 16 VRQTFLDYFTEQNGHSFVKSSSTIPYEDPTLLFANAGMNQYKSIFLGTVDPSSPFSKLKR 75
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
ANSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A MA LT+
Sbjct: 76 AANSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEATAMAWNLLTQV-YG 134
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP RLY TYF G +GLP D ET+++WL LGVP DHI K NFWEMG+TGPCG
Sbjct: 135 LPPSRLYVTYFEGG--FGLPADLETKNLWLALGVPEDHIIPGNAKDNFWEMGATGPCGPC 192
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
+EIHYD G ++A + VN D D++E+WN+VFI + R + ++ L ++DTG+GFER
Sbjct: 193 TEIHYDRIGGRNAA-SLVNMDDPDVLEVWNVVFIQYNREADSSLRELPAKHVDTGMGFER 251
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV++LQ+K S YDTD+F PL + I++++ A+ Y + +DT+YR+++D+ R +T
Sbjct: 252 LVSVLQDKRSNYDTDVFRPLFDKIQQLTNARAYEGKLGKDDVDGIDTAYRVVADHVRTLT 311
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A+ D P + LR V+R F V G L + E +G +PEI
Sbjct: 312 FAICDGGVPSNVGRGYVLRRVLRRGARYVRKKFGVPIGSFFSSLVPTLVEQMGGFFPEIT 371
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
++ IL EE E F + G L Y+ Q
Sbjct: 372 GKFEDLKEILDEEE------------------------ESFARTLDRGEKLFESYV--QQ 405
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA--- 485
A+ + G + LYDTYG ++ +A L++ AFE KE SK
Sbjct: 406 AKKEGSNTLRGADVWRLYDTYGFPVDLTLLMAEEAGLSIDQAAFEAAQEASKEASKGAGK 465
Query: 486 KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
K +D+ D+ P T+D+ KY T V V+
Sbjct: 466 KGDGQAVRLDVHDIAALEANADVPKTNDEAKY----------------GTGNVDSVV--- 506
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
K R + AS + ++ +G++ D+TN YA +GGQ D G + Q
Sbjct: 507 -----KAIYRQGKFVASTEELEDAQQVQLGIVLDRTNFYAESGGQEYDTGRIVIDG--QA 559
Query: 600 NGKVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
+ VE ++ G ++H G VV + KV + S D R HT +H+LN
Sbjct: 560 DFVVE--DVQVFNGYVLHIGRVVEGALKVGDKVVS--SYDELRRWPLRNNHTGTHILNYC 615
Query: 659 LRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
LR VL QK V + DFS + + + +E N+ I V+V + M
Sbjct: 616 LREVLGDHVDQKGSLVAPSKLRFDFS-HKSPIPTAELDRIEDMSNEWIKRNVKVFSKEMD 674
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDI--------SDKEN----VISREPCCGTHVFNTG 765
S + L + GE YPD V ++ + +D EN S E C GTHV TG
Sbjct: 675 LSTAQKIPGLRAVFGEAYPDPVRVVTLEFSLEEIQADIENPKWRSTSVEFCGGTHVQKTG 734
Query: 766 HIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNV 815
I+ + G+R I +TG+ ++ A + + A F QI+ +
Sbjct: 735 EIKEFVITEESGIAKGIRRIIAITGEDARKASQLAN--DSEARFEQIIKL 782
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM Q+K++FLG P R ANSQKCIR GGKHNDL G+D
Sbjct: 39 IPYEDPTLLFANAGMNQYKSIFLGTVDPSSPFSKLKRAANSQKCIRAGGKHNDLDDVGKD 98
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A MA LT+ LP RLY T+
Sbjct: 99 TYHHTFFEMLGNWSFGDYFKKEATAMAWNLLTQ-VYGLPPSRLYVTY 144
>gi|226288201|gb|EEH43713.1| alanyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
Length = 962
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 278/819 (33%), Positives = 416/819 (50%), Gaps = 92/819 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R++FLD+F + GHT V SS +VP D ++ F N+GM Q+K +FLG A R
Sbjct: 17 VRNAFLDFFKDN-GHTFVPSSSVVPLSDPTLLFANAGMNQYKAIFLGTVEPNSDFAQLKR 75
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
N+QKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A R + + LTK
Sbjct: 76 AHNTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIRYSWDLLTKV-YG 134
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYF G+ G+ D E RD+WL +GV DH+ MK NFWEMG GPCG
Sbjct: 135 LDPDRLYVTYFEGNPDAGIEPDLEARDLWLSVGVAEDHLLSGNMKDNFWEMGEQGPCGPC 194
Query: 192 SEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIHYD + G +S L VN D +++EIWN VFI + R ++ PL ++DTG+G+E
Sbjct: 195 SEIHYDRIGGRNASHL--VNQDDPNVLEIWNNVFIQYNREQDKSLRPLPNKHVDTGMGYE 252
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV+ILQNK+S YDTD+F PL E I +++G++PY F + +DT+YR+++D+ R +
Sbjct: 253 RLVSILQNKSSNYDTDVFTPLFEKIREITGSRPYTGKFHEEDVDGVDTAYRVVADHIRTL 312
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
T A++D P+ + +R V+R + V+ G ++ + E +GD++PEI
Sbjct: 313 TFAISDGAVPNNEGRGYVVRRVLRRGARYARKYLNVEIGGFFSQIVPTLVEQMGDMFPEI 372
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ + IL EE F K L + + E++ +
Sbjct: 373 KRKATDVMEILDEEEISFA----------KTLDRGERLFEEYALQ--------------- 407
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK--A 485
A+ + + G + LYDT+G ++ Q +A + L + + FE+ KE SK
Sbjct: 408 -AKQKGLDRLHGADVWRLYDTFGFPVDLTQLMAEERGLKIDNGEFEEARLRAKEASKGQG 466
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
K +V + + DL DD K D +S ++ + + +
Sbjct: 467 KQTKDVVKLTVHDLGLLETMDDVPKTD-----DSAKFGRGNITSQI-------------- 507
Query: 546 HAIRHARSGASIDSIQ-LEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
AI H + +DS + + G+I D+TN YA GGQ D G + +GK E
Sbjct: 508 KAIYHNKK--FVDSSKDIPEGEQFGIILDRTNFYAEQGGQEYDTGKIII------DGKAE 559
Query: 605 IG--ELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+ ++ G ++H G + SF + + + E D R HT +H+LN ALR+
Sbjct: 560 LAVEDVQVYGGYVLHTGFMKYGSFNINDSVIA--EYDELRRWPIRNNHTGTHILNFALRK 617
Query: 662 VL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL QK V +++ DFS + +S + +E+ D I V + + S
Sbjct: 618 VLGDGVEQKGSLVAAEKLRFDFS-HKSAVSDSDLEEIERISTDYIRQNCAVYGKDVPLSI 676
Query: 721 LPFLTHLTVIPGEIYPDDV-----------ILIDISD-KENVISREPCCGTHVFNTGHIE 768
+T + + GE YPD V IL D+ D + IS E C GTHV TG I+
Sbjct: 677 AREITGVRAVFGETYPDPVRVVSVGVELEEILKDVHDPRWKEISIEFCGGTHVQKTGDIK 736
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHL 803
++ G+R I +TG+ + + A E G+ L
Sbjct: 737 DLVILEESGIAKGIRRIIAVTGEEAHEVQRIAKEFGERL 775
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K +FLG A R N+QKCIR GGKHNDL G+D
Sbjct: 39 VPLSDPTLLFANAGMNQYKAIFLGTVEPNSDFAQLKRAHNTQKCIRAGGKHNDLDDVGKD 98
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A R + + LTK L DRLY T+
Sbjct: 99 SYHHTFFEMLGNWSFGDYFKKEAIRYSWDLLTK-VYGLDPDRLYVTY 144
>gi|407425709|gb|EKF39507.1| alanyl-tRNA synthetase, putative, partial [Trypanosoma cruzi
marinkellei]
Length = 1007
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 285/828 (34%), Positives = 411/828 (49%), Gaps = 106/828 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAP------YP 70
+R FL +F +GH V SSP+VP D ++ F+N+GM QFKN+FLG T P
Sbjct: 57 VRQEFLKFF-EQRGHKFVPSSPVVPNNDPTLLFINAGMNQFKNIFLG-TADPNTEFGRLT 114
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R ANSQ C+R GGKHNDL GRD+YHHTFFEMLG+WSF DY+KRDA R A E LT+
Sbjct: 115 RAANSQLCIRAGGKHNDLDDVGRDTYHHTFFEMLGSWSFGDYFKRDAIRWAWELLTEV-Y 173
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP DRLY TYF G + G+ DEE + +WLEL P +H+ K NFWEMG GPCG
Sbjct: 174 KLPKDRLYVTYFEGDPENGIAADEEAKQLWLELVNP-EHVISGNAKDNFWEMGDIGPCGP 232
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SE+H+D G ++A VN + +IEIWN+VF+ +R +VPL K ++DTG+G E
Sbjct: 233 CSEVHFDRLGGRNAA-DLVNKEDPMVIEIWNLVFMQFERHEGGVLVPLPKMHVDTGMGLE 291
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RL +I+Q S YDTD + PL E I+ V+G + N +D +YR+++D+ R +
Sbjct: 292 RLTSIMQGVHSNYDTDAWTPLFEAIQAVTGYEKSYAEIREQNDSDATVAYRVIADHIRCL 351
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+V+LAD PD+ + LR ++R A+ K G EL + LG + +
Sbjct: 352 SVSLADGAMPDSVGRGFVLRRIIRRAVRYGLQFLGAKVG-FFGELVDAVVASLGPFFTHL 410
Query: 368 QD--SINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
QD ++ +I+ +L EE F K W +G+K+
Sbjct: 411 QDPRTVQRIKTVLAEEEASF-------AKTWD---------------------VGLKHFN 442
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE--QKLNELKERS 483
K +A D ISGD AF L+D YG ++ LA L + F K N+L
Sbjct: 443 KAVA-DAVDNTISGDNAFILHDRYGFPVDLTCLLAEKAGLRVDMNGFHAAMKANQLSAGR 501
Query: 484 KAKAASNVPDIDLMDLKHFPV--TDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
A A + + L +LK + T+D KY + T +
Sbjct: 502 IAAAKTFLDAHQLEELKQMGIAPTEDAAKYIWKNRTAEVK-------------------- 541
Query: 542 CIDKHAIRHARSGASIDSIQ--LEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
AI + ++G +D + E +GLI D TN YA +GGQI D G
Sbjct: 542 -----AIFNKKTGTFVDMLMPGEEGEEDIGLIMDVTNFYAESGGQIYDTG----RIVAAA 592
Query: 600 NGKVEIGELASLEGKIVHFGNVVS--SFKVTPGLTSRV--EVDARMRLGCMRAHTTSHLL 655
+ E+ ++ +L G +VH G +++ S V +TS V +VD + R+ H+T+H+L
Sbjct: 593 DAVFEVKKVYNLGGYVVHLGRMMTTNSTAVPIPVTSSVDLQVDYKRRIAVAANHSTTHVL 652
Query: 656 NAALRRVL--------TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
N LRRVL QK V + DFS Y +S + + +EK +N+ I
Sbjct: 653 NWCLRRVLEEEAPENYMEVQQKGSLVTEEMLRFDFS-YNSKVSQEDLVKIEKALNEKIQQ 711
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKENVISR----EP 755
++ V R+ + + + L + GE YPD V +I + + EN R E
Sbjct: 712 ELVVYRKEVELEKAKHIVGLRQMFGEKYPDPVSVISVGIPVDDLLAKPENAEWRAYAVEF 771
Query: 756 CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
C GTH+ N E ++ ++ GVR I T D+++ A G+ L
Sbjct: 772 CGGTHLSNIKEAEVAVILSEEALMKGVRRIVVATRDAARKACARGELL 819
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 75/108 (69%), Gaps = 8/108 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAP------YPRVANSQKCIRVGGKHNDLSFAGR 871
+P D ++ F+N+GM QFKN+FLG T P R ANSQ CIR GGKHNDL GR
Sbjct: 79 VPNNDPTLLFINAGMNQFKNIFLG-TADPNTEFGRLTRAANSQLCIRAGGKHNDLDDVGR 137
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
D+YHHTFFEMLG+WSF DY+KRDA R A E LT+ LP DRLY T+
Sbjct: 138 DTYHHTFFEMLGSWSFGDYFKRDAIRWAWELLTE-VYKLPKDRLYVTY 184
>gi|402867121|ref|XP_003897716.1| PREDICTED: alanine--tRNA ligase, mitochondrial [Papio anubis]
Length = 985
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 277/811 (34%), Positives = 409/811 (50%), Gaps = 86/811 (10%)
Query: 21 FLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANS 75
FL++F + GH LV S+ + P GD S+ FVN+GM QFK +FLG A + RVANS
Sbjct: 46 FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105
Query: 76 QKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPL 134
QKCVR GG+HNDL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P
Sbjct: 106 QKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPT 164
Query: 135 DRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEI 194
+RL+ +YF G + GL D ETRDIWL LGVP + G + NFWEMG+TGPCG +EI
Sbjct: 165 ERLWVSYFDGDPKAGLEPDLETRDIWLSLGVPATRVLSFGPQENFWEMGNTGPCGPCTEI 224
Query: 195 HYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVT 254
HYD+ G L+E+WN+VF+ H R + ++ PL + ++DTG+G ERLV
Sbjct: 225 HYDLAG---------GVGAPQLVELWNLVFMQHNREADGSLQPLPQWHVDTGMGLERLVA 275
Query: 255 ILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVAL 314
+LQ K STYDTDLF PLL I++ A PY ++ DT+YR+++D+ R ++V +
Sbjct: 276 VLQGKHSTYDTDLFSPLLHAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCI 335
Query: 315 ADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSI 371
+D +FP + LR ++R A+ S ++ K G + L + E LGD YPE+Q +
Sbjct: 336 SDGVFPGMSGPPLVLRRILRRAVRFSMEILKAPPG-FLGSLVPVVVETLGDAYPELQRNS 394
Query: 372 NKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLAR 430
+I L+L +E+ +L + + + +T L ++ P V L+ L
Sbjct: 395 AQISNLVLEDEAAFLASLERGR----RIIDRTLRTLGPSDMF--PAEVAWSLSLSGDLGL 448
Query: 431 DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASN 490
+ E+ + D+ GL + L EA + + + K K +
Sbjct: 449 PLDMVELMLEEKGVQLDSTGLER-------------LAQEAAQHQARQAKPVQKQGLWLD 495
Query: 491 VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRH 550
V + + + P TD KY+Y N Y F + ++ Q++ D A+
Sbjct: 496 VHALGELQRQGVPPTDSSPKYNYSLRPNGS-YEFGTCEAQVL------QLYTEDGTAV-- 546
Query: 551 ARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELAS 610
AS+ Q GL+ D+TN YA GGQ D G YL QE+ +
Sbjct: 547 ----ASVGKGQR-----CGLLLDRTNFYAEQGGQASDRG--YLVRVGQEDVLFPVARAQV 595
Query: 611 LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQK 669
G I+H ++ G ++ VD RL CM HT +HLLN ALR+ L T Q+
Sbjct: 596 CGGFILHEAVAPECLQI--GDQVQLHVDKAWRLACMAKHTATHLLNWALRQTLGPGTEQQ 653
Query: 670 SCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTV 729
+ ++ LD + L+ + + AVE + + VQ D + + E+P L
Sbjct: 654 GSHLNPEQLRLDVTTQ-TALTPEQLRAVENTVQEA----VQQD-KPVYMEEVP-LALTAQ 706
Query: 730 IPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
+PG E+YPD V L S S E CCGTH+ TG + +I
Sbjct: 707 VPGLRCLDEVYPDPVRVVSVGVPVAHALDPASQAALQTSVELCCGTHLLRTGAVGDLVII 766
Query: 774 GYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
G + + G + +TG+ ++ A E G++L+
Sbjct: 767 GDRQLSKGTTRLLAITGEQAQQARELGQNLA 797
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 74/107 (69%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RVANSQKC+R GG+HNDL GRD
Sbjct: 66 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P +RL+ ++
Sbjct: 126 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPTERLWVSY 171
>gi|403261407|ref|XP_003923114.1| PREDICTED: alanine--tRNA ligase, mitochondrial [Saimiri boliviensis
boliviensis]
Length = 985
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 277/812 (34%), Positives = 401/812 (49%), Gaps = 86/812 (10%)
Query: 20 SFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVAN 74
+FL +F + GH LV S+ + P GD S+ FVN+GM QFK +FLG A + RVAN
Sbjct: 45 TFLTFFRDRHGHRLVPSASVRPRGDPSLFFVNAGMNQFKPIFLGTVDPRSEMAGFRRVAN 104
Query: 75 SQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN-DYYKRDACRMALEFLTKPPVSLP 133
SQKCVR GG HNDL GRD HHTFFEMLG+W+F +Y+K +AC MA E LT+ +P
Sbjct: 105 SQKCVRAGGHHNDLEDVGRDLSHHTFFEMLGSWAFGGEYFKEEACSMAWELLTQV-YGIP 163
Query: 134 LDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSE 193
+RL+ +YF G + GL D ETRDIWL LGVP + G + NFWEMG TGPCG +E
Sbjct: 164 EERLWVSYFDGDPKTGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPCAE 223
Query: 194 IHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLV 253
IHYD+ G L+E+WN+VF+ H R + ++ PL + ++DTG+G ERLV
Sbjct: 224 IHYDLAG---------GVGAPQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGLERLV 274
Query: 254 TILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVA 313
+LQ K STYDTDLF PLL I + A PY ++ DT+YR+++D+ R +++
Sbjct: 275 AVLQGKHSTYDTDLFSPLLSAIHQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSIC 334
Query: 314 LADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ-D 369
+AD +FP + LR ++R A+ S ++ K G + L + E LGD YPE+Q
Sbjct: 335 IADGVFPGMSGAPLVLRQILRRAVRFSTEILKAPPG-FLGSLVPVVVETLGDAYPELQRK 393
Query: 370 SINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLA 429
S + L+ +E+ +L + + + +T L ++ P V L L
Sbjct: 394 SAQIVNLVSEDEAAFLASLERGR----RIIDRTLRSLGPSDMF--PAEVAWSLSLAGDLG 447
Query: 430 RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAAS 489
+ E+ + D+ GL + L E + + + + K
Sbjct: 448 LPLDLVELMLEEKGVQLDSAGLER-------------LAREEAQHRAQQAEPVQKQVLWL 494
Query: 490 NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIR 549
+V + + + P TDD KYDY N Y F + ++ Q++ D A+
Sbjct: 495 DVHALGELQCRGVPPTDDSPKYDYSLQPNGG-YEFGTCEAQVL------QLYTEDGTAV- 546
Query: 550 HARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELA 609
AS+ Q GL+ DKTN YA GGQ D G YL QE+ I
Sbjct: 547 -----ASVGKGQR-----CGLLLDKTNFYAEQGGQASDRG--YLVRAGQEDVLFPIARAQ 594
Query: 610 SLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQK 669
G I+H V+ ++ G ++ VD RLGCM HT +HLLN ALR+ L ++
Sbjct: 595 VCGGFILH--EAVAPERLQIGDQVQLHVDKAWRLGCMEKHTATHLLNWALRQTLGPGTEQ 652
Query: 670 SCRVFSDECALDFSVYGET-LSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLT 728
+ E L F V +T L+ + + AVE + + + V +M L
Sbjct: 653 QGSHLNPE-QLRFDVATQTPLTPEQLRAVENTVQEAVRQDKAV---YMEEVALALTAQ-- 706
Query: 729 VIPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
+PG E+YPD V L S S E CCGTH+ TG + +
Sbjct: 707 -VPGLRSLDEVYPDPVRVVSVGVPVAHALDPASQAALQTSVELCCGTHLLRTGAVGDLVI 765
Query: 773 IGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
IG + + G + +TG+ ++ A E G+ L+
Sbjct: 766 IGERQLSKGTTRLLAVTGEQAQKARELGQSLA 797
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RVANSQKC+R GG HNDL GRD
Sbjct: 66 PRGDPSLFFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGHHNDLEDVGRDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLG+W+F +Y+K +AC MA E LT+ +P +RL+ ++
Sbjct: 126 SHHTFFEMLGSWAFGGEYFKEEACSMAWELLTQ-VYGIPEERLWVSY 171
>gi|218184221|gb|EEC66648.1| hypothetical protein OsI_32912 [Oryza sativa Indica Group]
Length = 953
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 264/821 (32%), Positives = 415/821 (50%), Gaps = 98/821 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----R 71
+R +F+ +F ++ HT SSP+VP D ++ F N+GM QFK VFLG P R
Sbjct: 12 VRETFISFF-ESKSHTRWPSSPVVPVDDPTLLFANAGMNQFKPVFLGTAAPDAPLGRLRR 70
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K +A A E LT+
Sbjct: 71 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEAIGFAWELLTQV-YK 129
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DR+Y TYFGG +++GL D E+++IWL+ +P++ + G K NFWEMG TGPCG
Sbjct: 130 LPTDRIYATYFGGDEKFGLAPDTESKNIWLKY-LPKEKVLPFGCKDNFWEMGDTGPCGPC 188
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
+EIH+D G +A + VN D IEIWN+VFI R + T+ PL ++DTG+GFER
Sbjct: 189 TEIHFDRVGNRDAA-SLVNNDDPTCIEIWNLVFIQFNREADCTLRPLPAKHVDTGMGFER 247
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSG--AKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
L +ILQNK S YDTD+F+P+ + I +++G + Y + +D +YR+++D+ R
Sbjct: 248 LTSILQNKMSNYDTDVFMPIFDAIHQLAGNGIQSYSGKVGPEDVDKVDMAYRVVADHIRT 307
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
++ A+AD P + LR ++R A+ K KQG L + +++GDV+PE
Sbjct: 308 LSFAIADGSQPGNEGREYVLRRILRRAVHFGHQKLKAKQG-FFSSLVHVFVQLMGDVFPE 366
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
++D+ KI+ I+ +E F+N +++K + E G VL
Sbjct: 367 LKDNEKKIKDIIKDEEESFENTLAKGFEKFKKAADA--------VKESGGTVL------- 411
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA- 485
SG AF L+DTYG ++ + + L++ E F+ + E +++++
Sbjct: 412 -----------SGQDAFVLWDTYGYPVDLTEVMGVDYGLSVDREGFDAAMEEARQKARNA 460
Query: 486 --KAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
KA N +D + + TDD KY Y + + + + + V GD
Sbjct: 461 RFKAGENSIVLDANATAQLRNQGLASTDDSPKYGYKDNDSVVKAIY--TGSEYVSAASGD 518
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
+ F GL+ + T+ YA GGQI D G
Sbjct: 519 EDF---------------------------GLVLESTSFYAEQGGQIYDTG-----KIEG 546
Query: 599 ENGKVEIGELASLEGKIVHFGNVVSSFK-VTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
G + + G ++H G+ K ++ G +VD R HT +H+LN
Sbjct: 547 SFGSFNVTNVQVFAGYVLHMGSFTKGSKALSVGDKVACKVDYARRALIAPNHTCTHMLNF 606
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR +L QK V ++ DFS +G+ + + + +E +N I ++++V R +
Sbjct: 607 ALREILGDHVDQKGSIVLPEKLRFDFS-HGKPVQPEDLRKIESIVNQQIKDKLEVFAREI 665
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDK-ENV-----------ISREPCCGTHVFNT 764
+ ++ + L + GEIYPD V ++ + K E++ IS E C GTH+ NT
Sbjct: 666 KLADAKRINGLRAVFGEIYPDPVRVVSVGRKVEDLLANPESKEWLSISTELCGGTHIKNT 725
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST 805
E+ ++ + GVR I +T + A+++ + +
Sbjct: 726 SEAEAFALLSEEGIAKGVRRITAVTAKHASDAIKDASSIDS 766
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK VFLG P R N+QKCIR GGKHNDL G+D
Sbjct: 34 VPVDDPTLLFANAGMNQFKPVFLGTAAPDAPLGRLRRACNTQKCIRAGGKHNDLDDVGKD 93
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K +A A E LT+ LP DR+Y T+
Sbjct: 94 TYHHTFFEMLGNWSFGDYFKEEAIGFAWELLTQ-VYKLPTDRIYATY 139
>gi|431838320|gb|ELK00252.1| Putative alanyl-tRNA synthetase, mitochondrial [Pteropus alecto]
Length = 983
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 282/831 (33%), Positives = 412/831 (49%), Gaps = 112/831 (13%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
+ ++R +FL +F + H LV S+ + P GD ++ FVN+GM QFK +FLG A
Sbjct: 38 AAAVRDAFLSFFRDRHRHRLVPSASVRPRGDPTLLFVNAGMNQFKPIFLGTVDPRSEMAG 97
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSF-NDYYKRDACRMALEFLTK 127
+ RVANSQKCVR GG+HNDL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+
Sbjct: 98 FRRVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ 157
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
+P DRL+ +YFGG L D E+RDIWL LGVP H+ G + NFWEMG TGP
Sbjct: 158 -VYGIPKDRLWISYFGGDPNTRLNPDLESRDIWLSLGVPASHVLSFGPQENFWEMGDTGP 216
Query: 188 CGYSSEIHYDMK---GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
CG +EIHYD+ G P L+E+WN+VF+ H R + ++ PL + ++D
Sbjct: 217 CGPCTEIHYDLADGVGAP------------QLVELWNLVFMQHNREADGSLQPLPQRHVD 264
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
TG+G ERLV +LQ + STYDTDLF PLL I++ GA PY ++ +D +YR+++
Sbjct: 265 TGMGLERLVAVLQGRHSTYDTDLFSPLLNAIQQGCGAPPYLGRVGAADEGRIDMAYRVVA 324
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D+ R ++V +AD + P + LR ++R A+ S +V + G + L + E LG
Sbjct: 325 DHIRTLSVCIADGVSPGTSGAPLVLRRILRRAVRFSTEVLRAPLG-FLGSLVPVVVETLG 383
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
D YPE+Q + +I ++ E+ F L Q G
Sbjct: 384 DTYPELQKNSAQIANLVSEDEAAF-------------LASLQ---------------RGR 415
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDT--YGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
+ + + L R ++A++L + GL ++I+ + K + L A +L +
Sbjct: 416 RIIDRTLRRLGPSDLFPAEVAWSLSMSGDLGLPLDLIELMLEEKGMRL-DSAGLARLAQE 474
Query: 480 KERSKAKAASNVPDIDLM-------DLKH--FPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
+ + +A+ A V + L +L+H P TDD KY+Y S Y F +
Sbjct: 475 EAQHRARQAEPVQEQGLQLGIHALGELQHRGVPPTDDSPKYNYCL-LPSGGYEFSTCEAQ 533
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
++ Q++ D A+ AS+ Q GL+ DKTN YA GGQ D G
Sbjct: 534 VL------QLYTEDGTAV------ASVGEGQR-----CGLLLDKTNFYAEQGGQASDRG- 575
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
YL Q++ + G I+H KV G ++ VD RLGCM HT
Sbjct: 576 -YLVRVGQQDVLFPVARAQVCGGFILHEMVAPECLKV--GDQVQLHVDKAWRLGCMEKHT 632
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+HLLN ALR+ L T Q+ + + D + L+ + + AVE + +
Sbjct: 633 ATHLLNWALRQALGPGTEQRGSHLNPERLRFDVATQA-PLTPEQLRAVENTVQKAVGQDE 691
Query: 710 QVDRRHMRASELPFLTHLTVIPG-----EIYPDDV-----------ILIDISDKENVISR 753
V +M E L H +PG E+YPD V L S S
Sbjct: 692 AV---YM---EEVALAHTAHVPGLRSLDEVYPDPVRVVSVGVPVAHALDPASQAALQTSV 745
Query: 754 EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
E CCGTH+ +TG I +IG + G + +TG+ ++ A E G+ L+
Sbjct: 746 ELCCGTHLLHTGSIGDLVIIGERQLTKGTTRLLAITGEQAQQAREVGQSLA 796
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 74/107 (69%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD ++ FVN+GM QFK +FLG A + RVANSQKC+R GG+HNDL GRD
Sbjct: 65 PRGDPTLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDL 124
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P DRL+ ++
Sbjct: 125 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPKDRLWISY 170
>gi|1673365|emb|CAA80380.1| mitochondrial tRNA-Ala synthetase [Arabidopsis thaliana]
Length = 1003
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 272/812 (33%), Positives = 415/812 (51%), Gaps = 98/812 (12%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP- 66
S + +K +R +++D+F +GH SSP+VP+ D ++ F N+GM Q+K +FLG
Sbjct: 55 SETQWPAKRVRDTYVDFF-RGKGHKFWPSSPVVPHNDPTLLFANAGMNQYKPIFLGTADP 113
Query: 67 ----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMAL 122
+ R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A A
Sbjct: 114 NTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEWAW 173
Query: 123 EFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEM 182
E LTK LP DR+Y TYFG ++ GL D E RDIWL++ +P + G K NFWEM
Sbjct: 174 ELLTKV-YGLPTDRIYATYFGRDEKAGLQPDNEARDIWLKV-LPSGRVLPFGCKDNFWEM 231
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
G TGPCG +EIHYD G +A + VN D +EIWN+VFI R S ++ PL +
Sbjct: 232 GDTGPCGPCTEIHYDRIGNRDAA-SLVNNDDPTCLEIWNLVFIQFNRESDGSLKPLPAKH 290
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRM 302
+DTG+GFERL ++LQNK S YDTD+F+P+ + I+K +GA+PY + +D +YR+
Sbjct: 291 VDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVGPEDVDRVDMAYRV 350
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI 359
++D+ R ++ A+AD P + LR ++R A+ +++ K ++G L ++ +
Sbjct: 351 VADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGKEILKAEEG-FFNGLVSSVIRV 409
Query: 360 LGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
+GDV+ E+++ KI I+ EE F K L K +E+F
Sbjct: 410 MGDVFTELKEHEKKITDIIKEEEASF----------CKTLAKG---IEKF---------- 446
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
++ + +SGD AF L+DTYG ++ Q +A + L + + F + + E
Sbjct: 447 ------RKAGQAVQGNTLSGDDAFILWDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEA 500
Query: 480 KERS-----KAKAASNVPDIDLMDLKH---FPVTDDKYKYDYHYDTNSKRYTFPCLDTNL 531
+ERS K + V D D H TDD +KY + D S+ L
Sbjct: 501 RERSRSAQNKQAGGAIVMDADATSTLHKAGVSATDDSFKYIWFQDHESE----------L 550
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
I G S A+ D+ VGL+ T+ YA GGQI D G+
Sbjct: 551 KAIYTGSTFL----------ESSAASDN--------VGLVLGSTSFYAEQGGQIFDTGLI 592
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ T V+I G ++H G + + +V+ G +VD R HT
Sbjct: 593 EGSFGTFNVCNVQI-----FGGFVLHIGYLSKETGEVSVGDKVICKVDYERRKLIAPNHT 647
Query: 651 TSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H+LN AL+ VL QK V ++ DFS +G+ + + + +E +N I +++
Sbjct: 648 CTHMLNYALKEVLGDHIDQKGSIVLPEKLRFDFS-HGKPVDPEDLRRIESIVNKQIKDEL 706
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKEN----VISREPCC 757
V + SE + L + GE YPD V ++ I +D EN ++S E C
Sbjct: 707 DVFSKEAVLSEAKRIKGLRAVFGEAYPDPVRVVSIGRKVEDLLADPENNEWSLLSSEFCG 766
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLT 789
GTH+ NT ++ ++ + G+R + +T
Sbjct: 767 GTHITNTREAKAFALLSEEGIAKGIRRVTAVT 798
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + R N+QKCIR GGKHNDL G+D
Sbjct: 86 VPHNDPTLLFANAGMNQYKPIFLGTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKD 145
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A A E LTK LP DR+Y T+
Sbjct: 146 TYHHTFFEMLGNWSFGDYFKKEAIEWAWELLTK-VYGLPTDRIYATY 191
>gi|1673366|emb|CAA80381.1| cytosolic tRNA-Ala synthetase [Arabidopsis thaliana]
Length = 955
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 272/812 (33%), Positives = 415/812 (51%), Gaps = 98/812 (12%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP- 66
S + +K +R +++D+F +GH SSP+VP+ D ++ F N+GM Q+K +FLG
Sbjct: 7 SETQWPAKRVRDTYVDFF-RGKGHKFWPSSPVVPHNDPTLLFANAGMNQYKPIFLGTADP 65
Query: 67 ----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMAL 122
+ R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A A
Sbjct: 66 NTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEWAW 125
Query: 123 EFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEM 182
E LTK LP DR+Y TYFG ++ GL D E RDIWL++ +P + G K NFWEM
Sbjct: 126 ELLTKV-YGLPTDRIYATYFGRDEKAGLQPDNEARDIWLKV-LPSGRVLPFGCKDNFWEM 183
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
G TGPCG +EIHYD G +A + VN D +EIWN+VFI R S ++ PL +
Sbjct: 184 GDTGPCGPCTEIHYDRIGNRDAA-SLVNNDDPTCLEIWNLVFIQFNRESDGSLKPLPAKH 242
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRM 302
+DTG+GFERL ++LQNK S YDTD+F+P+ + I+K +GA+PY + +D +YR+
Sbjct: 243 VDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVGPEDVDRVDMAYRV 302
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI 359
++D+ R ++ A+AD P + LR ++R A+ +++ K ++G L ++ +
Sbjct: 303 VADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGKEILKAEEG-FFNGLVSSVIRV 361
Query: 360 LGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
+GDV+ E+++ KI I+ EE F K L K +E+F
Sbjct: 362 MGDVFTELKEHEKKITDIIKEEEASF----------CKTLAKG---IEKF---------- 398
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
++ + +SGD AF L+DTYG ++ Q +A + L + + F + + E
Sbjct: 399 ------RKAGQAVQGNTLSGDDAFILWDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEA 452
Query: 480 KERS-----KAKAASNVPDIDLMDLKH---FPVTDDKYKYDYHYDTNSKRYTFPCLDTNL 531
+ERS K + V D D H TDD +KY + D S+ L
Sbjct: 453 RERSRSAQNKQAGGAIVMDADATSTLHKAGVSATDDSFKYIWFQDHESE----------L 502
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
I G S A+ D+ VGL+ T+ YA GGQI D G+
Sbjct: 503 KAIYTGSTFL----------ESSAASDN--------VGLVLGSTSFYAEQGGQIFDTGLI 544
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ T V+I G ++H G + + +V+ G +VD R HT
Sbjct: 545 EGSFGTFNVCNVQI-----FGGFVLHIGYLSKETGEVSVGDKVICKVDYERRKLIAPNHT 599
Query: 651 TSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H+LN AL+ VL QK V ++ DFS +G+ + + + +E +N I +++
Sbjct: 600 CTHMLNYALKEVLGDHIDQKGSIVLPEKLRFDFS-HGKPVDPEDLRRIESIVNKQIKDEL 658
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKEN----VISREPCC 757
V + SE + L + GE YPD V ++ I +D EN ++S E C
Sbjct: 659 DVFSKEAVLSEAKRIKGLRAVFGEAYPDPVRVVSIGRKVEDLLADPENNEWSLLSSEFCG 718
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLT 789
GTH+ NT ++ ++ + G+R + +T
Sbjct: 719 GTHITNTREAKAFALLSEEGIAKGIRRVTAVT 750
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + R N+QKCIR GGKHNDL G+D
Sbjct: 38 VPHNDPTLLFANAGMNQYKPIFLGTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A A E LTK LP DR+Y T+
Sbjct: 98 TYHHTFFEMLGNWSFGDYFKKEAIEWAWELLTK-VYGLPTDRIYATY 143
>gi|115481322|ref|NP_001064254.1| Os10g0182000 [Oryza sativa Japonica Group]
gi|110288715|gb|ABG65948.1| Alanyl-tRNA synthetase, mitochondrial precursor, putative,
expressed [Oryza sativa Japonica Group]
gi|113638863|dbj|BAF26168.1| Os10g0182000 [Oryza sativa Japonica Group]
gi|215694746|dbj|BAG89937.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 999
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 264/821 (32%), Positives = 415/821 (50%), Gaps = 98/821 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----R 71
+R +F+ +F ++ HT SSP+VP D ++ F N+GM QFK VFLG P R
Sbjct: 58 VRETFISFF-ESKSHTRWPSSPVVPVDDPTLLFANAGMNQFKPVFLGTAAPDAPLGRLRR 116
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K +A A E LT+
Sbjct: 117 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEAIGFAWELLTQV-YK 175
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DR+Y TYFGG +++GL D E+++IWL+ +P++ + G K NFWEMG TGPCG
Sbjct: 176 LPTDRIYATYFGGDEKFGLAPDTESKNIWLKY-LPKEKVLPFGCKDNFWEMGDTGPCGPC 234
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
+EIH+D G +A + VN D IEIWN+VFI R + T+ PL ++DTG+GFER
Sbjct: 235 TEIHFDRVGNRDAA-SLVNNDDPTCIEIWNLVFIQFNREADCTLRPLPAKHVDTGMGFER 293
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSG--AKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
L +ILQNK S YDTD+F+P+ + I +++G + Y + +D +YR+++D+ R
Sbjct: 294 LTSILQNKMSNYDTDVFMPIFDAIHQLAGNGIQSYSGKVGPEDVDKVDMAYRVVADHIRT 353
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
++ A+AD P + LR ++R A+ K KQG L + +++GDV+PE
Sbjct: 354 LSFAIADGSQPGNEGREYVLRRILRRAVHFGHQKLKAKQG-FFSSLVHVFVQLMGDVFPE 412
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
++D+ KI+ I+ +E F+N +++K + E G VL
Sbjct: 413 LKDNEKKIKDIIKDEEESFENTLAKGFEKFKKAADA--------VKESGGTVL------- 457
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA- 485
SG AF L+DTYG ++ + + L++ E F+ + E +++++
Sbjct: 458 -----------SGQDAFVLWDTYGYPVDLTEVMGVDYGLSVDREGFDAAMEEARQKARNA 506
Query: 486 --KAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
KA N +D + + TDD KY Y + + + + + V GD
Sbjct: 507 RFKAGENSIVLDANATAQLRNQGLASTDDSPKYGYKDNDSVVKAIY--TGSEYVSAASGD 564
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
+ F GL+ + T+ YA GGQI D G
Sbjct: 565 EDF---------------------------GLVLESTSFYAEQGGQIYDTG-----KIEG 592
Query: 599 ENGKVEIGELASLEGKIVHFGNVVSSFK-VTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
G + + G ++H G+ K ++ G +VD R HT +H+LN
Sbjct: 593 SFGSFNVTNVQVFAGYVLHMGSFTKGSKALSVGDKVACKVDYARRALIAPNHTCTHMLNF 652
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR +L QK V ++ DFS +G+ + + + +E +N I ++++V R +
Sbjct: 653 ALREILGDHVDQKGSIVLPEKLRFDFS-HGKPVQPEDLRKIESIVNQQIKDKLEVFAREI 711
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDK-ENV-----------ISREPCCGTHVFNT 764
+ ++ + L + GEIYPD V ++ + K E++ IS E C GTH+ NT
Sbjct: 712 KLADAKRINGLRAVFGEIYPDPVRVVSVGRKVEDLLANPESKEWLSISTELCGGTHIKNT 771
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST 805
E+ ++ + GVR I +T + A+++ + +
Sbjct: 772 SEAEAFALLSEEGIAKGVRRITAVTAKHASDAIKDASSIDS 812
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK VFLG P R N+QKCIR GGKHNDL G+D
Sbjct: 80 VPVDDPTLLFANAGMNQFKPVFLGTAAPDAPLGRLRRACNTQKCIRAGGKHNDLDDVGKD 139
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K +A A E LT+ LP DR+Y T+
Sbjct: 140 TYHHTFFEMLGNWSFGDYFKEEAIGFAWELLTQ-VYKLPTDRIYATY 185
>gi|357473865|ref|XP_003607217.1| Alanyl-tRNA synthetase [Medicago truncatula]
gi|355508272|gb|AES89414.1| Alanyl-tRNA synthetase [Medicago truncatula]
Length = 950
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 266/811 (32%), Positives = 410/811 (50%), Gaps = 100/811 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R +F+ +F + H KSSP+VP D ++ F N+GM Q+K +FLG + R
Sbjct: 16 VRDTFVKFF-EEKNHVYWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTVDPNTALSKLSR 74
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K +A A E LTK
Sbjct: 75 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEAISWAWELLTKV-YK 133
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DR+Y TYFGG ++ GL D E RDIWL+ +P + G K NFWEMG TGPCG
Sbjct: 134 LPSDRIYATYFGGDEKAGLAPDTEARDIWLKF-LPPGRVLPFGCKDNFWEMGDTGPCGPC 192
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
+EIH+D G +A + VN D IEIWN+VFI R + ++ L ++DTG+GFER
Sbjct: 193 TEIHFDRIGNRDAA-SLVNNDDPTCIEIWNLVFIQFNREADSSLKSLPAKHVDTGMGFER 251
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
L +ILQ K S YDTD+F+P+ + I+ +GA+PY + +D +YR+++D+ R ++
Sbjct: 252 LTSILQRKLSNYDTDVFMPIFDAIQLATGARPYSGKVGPEDADKIDMAYRVVADHIRTLS 311
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A+AD P + LR ++R A+ +V K ++G L +A +LGDV+PE++
Sbjct: 312 FAIADGSRPGNEGREYVLRRILRRAVRYGREVLKAEEG-FFNGLVNVVANVLGDVFPELK 370
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
I+ ++ EE F + ++K V Q NI+
Sbjct: 371 QQEVHIRNVIQEEEESFGRTLVKGIAKFKTAVGHV----QGNIL---------------- 410
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAA 488
SG++AF L+DTYG ++ Q +A KKL + E F + +ERS+
Sbjct: 411 ---------SGEVAFELWDTYGFPLDLTQLMAEEKKLKVDVEGFNSAMEAARERSRTAQN 461
Query: 489 SNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
+MD + TDD +K+ +F +T + I G +
Sbjct: 462 KQAGGAIVMDADATSALQKRSIVPTDDSFKF----------ASFRDHETVVKAIYTGSEF 511
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
+DS+ + + VG+I + T+ YA GGQI D G + + +
Sbjct: 512 ----------------VDSVNTDGD--VGVILESTSFYAEQGGQIFDTGSLDFHHASFQV 553
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
V++ G ++H GN ++ G +VD R HT +H+LN ALR
Sbjct: 554 HNVQV-----YGGFVLHIGNGTG---ISVGDKVVCKVDYGRRALIAPNHTCTHMLNFALR 605
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
VL QK V ++ DFS +G+ + DS+ +E +N+ I ++ V+ + + +
Sbjct: 606 EVLGNHVDQKGSIVLPEKLRFDFS-HGKPVDADSLRRIESIVNEQIQAELDVNAKEVTLA 664
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDK-ENV-----------ISREPCCGTHVFNTGHI 767
+ + L + GE+YPD V ++ + K E++ IS E C GTH+ NT
Sbjct: 665 DAKRIKGLRAVFGEVYPDPVRVVSVGQKVEDLLADPDNEKWLSISSELCGGTHISNTREA 724
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
++ ++ + G+R I +T D + A++
Sbjct: 725 KAFALLAEEGIAKGIRRITAVTTDRASDAMK 755
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K +FLG + R N+QKCIR GGKHNDL G+D
Sbjct: 38 VPVNDPTLLFANAGMNQYKPIFLGTVDPNTALSKLSRACNTQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K +A A E LTK LP DR+Y T+
Sbjct: 98 TYHHTFFEMLGNWSFGDYFKEEAISWAWELLTK-VYKLPSDRIYATY 143
>gi|156371401|ref|XP_001628752.1| predicted protein [Nematostella vectensis]
gi|156215737|gb|EDO36689.1| predicted protein [Nematostella vectensis]
Length = 961
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 262/806 (32%), Positives = 406/806 (50%), Gaps = 86/806 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +K IR F+D+F HT V SS ++P+ D ++ F N+GM Q+K++FLG
Sbjct: 5 LTAKDIRRKFIDFFVEKHNHTFVPSSSVIPHEDPTLLFANAGMNQYKSIFLGTVDPNSDM 64
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
+ R NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF D++K+ A A EFLT
Sbjct: 65 SKLKRAVNSQKCIRAGGKHNDLEDVGKDVYHHTFFEMLGNWSFGDFFKKGAIDFAWEFLT 124
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ + +P +RLY TYFGG D G+ CD ET+D W+ G+ + GM NFWEMG TG
Sbjct: 125 EV-LKVPKERLYVTYFGGCD--GVECDNETKDYWIGKGLDPSRVLPFGMSDNFWEMGDTG 181
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G A A VN D ++EIWN+VFI R + T+ L ++DTG
Sbjct: 182 PCGPCSEIHYDRIG-GRDAKALVNMDDPTVLEIWNLVFIQFNRENDGTLKTLPSQHVDTG 240
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV+I+Q K S YDTDLF P + I + +G +PYG +++ +D +YR+++D+
Sbjct: 241 MGLERLVSIIQGKMSNYDTDLFTPFFDKIHQATGVQPYGGQVGLADQNGIDMAYRVVADH 300
Query: 307 SRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQ----GKLVKELSYNIAEILGD 362
R +TVA++D PD R V +L + +++ L + + LG+
Sbjct: 301 IRTLTVAMSDGGKPDNVG--RGYVLRRILRRCIRYSIEKLNASPGFTASLVSVVIDTLGE 358
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE+ ++ ++ EE F +KT L G +
Sbjct: 359 FFPELNKDPQQVMDVINEEEVQF--------------LKT--------------LARG-R 389
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE- 481
L ++ A + I GD+A+ LYDTYG ++ + +A + L + E +E+ +E
Sbjct: 390 RLFERTASKITDGTIPGDVAWRLYDTYGFPVDLTELMAEERGLRVDMEKYEEAKRRAQEI 449
Query: 482 -RSKAKAASNVPDID------LMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
R K A+ + +D L ++ + P T D KY Y D Y F + +
Sbjct: 450 ARGKDSASDDAITLDVHLLDKLQNVMNLPPTIDLPKYSYSSDALGS-YVFQPVSGTI--- 505
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+ +K + G EH G+I D+T+ YA GGQI D G ++T
Sbjct: 506 ----KALLHEKEFVNEVPGG--------EH---CGIILDQTSFYAEQGGQIYDEG--FMT 548
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E+ + + + G ++H G + + +V G T +D R CM HT +H+
Sbjct: 549 KEGDEDVEFRVINVQVHGGYVLHVGALEGAIRV--GDTMNCLIDEDRRRQCMNNHTATHI 606
Query: 655 LNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
LN ALRR L Q+ V + DF+ G ++ + V + E + +++ + + V +
Sbjct: 607 LNFALRRTLGEADQRGSLVAPNRLRFDFTAKG-AMTPEQVKSTELFSKEIVTSDLPVFAK 665
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP----------CCGTHVFNT 764
+ ++ + L I E+YPD V ++ I + + P C GTH+ +
Sbjct: 666 EVALAQAKDVQGLRAIFDEVYPDPVRVVSIGASFDELQPNPQAGYKYSIEFCGGTHLQRS 725
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTG 790
H+E+ ++ ++ + G+R I LTG
Sbjct: 726 SHMETFVLVSEEAISKGIRRIVALTG 751
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM Q+K++FLG + R NSQKCIR GGKHNDL G+D
Sbjct: 33 IPHEDPTLLFANAGMNQYKSIFLGTVDPNSDMSKLKRAVNSQKCIRAGGKHNDLEDVGKD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF D++K+ A A EFLT+ + +P +RLY T+
Sbjct: 93 VYHHTFFEMLGNWSFGDFFKKGAIDFAWEFLTE-VLKVPKERLYVTY 138
>gi|157818067|ref|NP_001100361.1| alanine--tRNA ligase, mitochondrial [Rattus norvegicus]
gi|313471549|sp|D3ZX08.1|SYAM_RAT RecName: Full=Alanine--tRNA ligase, mitochondrial; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS; Flags:
Precursor
gi|149069292|gb|EDM18733.1| alanyl-tRNA synthetase like (predicted) [Rattus norvegicus]
Length = 985
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 273/825 (33%), Positives = 415/825 (50%), Gaps = 99/825 (12%)
Query: 16 SIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYP 70
++R +FL +F + GH LV S+ + P GD S+ FVN+GM QFK +FLG A +
Sbjct: 36 AVRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFR 95
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN-DYYKRDACRMALEFLTKPP 129
RVANSQKCVR GG+HNDL GRD HHTFFEMLGNW+F +Y+K++AC MA E LT+
Sbjct: 96 RVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKKEACSMAWELLTQV- 154
Query: 130 VSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
+P DRL+ +YF G + GL D ETRDIWL LGVP + G++ NFWEMG TGPCG
Sbjct: 155 YGIPEDRLWVSYFSGDSKTGLDPDLETRDIWLSLGVPASRVLSFGLQENFWEMGDTGPCG 214
Query: 190 YSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
+EIHYD+ G L+E+WN+VF+ H R + ++ L + ++DTG+G
Sbjct: 215 PCTEIHYDLAG---------GMGPPQLVELWNLVFMQHYREADGSLHLLPQQHVDTGMGL 265
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERLV +LQ K STYDTDLF PLL+ I + PY ++ +DT+YR+++D+ R
Sbjct: 266 ERLVAVLQGKHSTYDTDLFSPLLDAIHQSCRVPPYSGRVGAADEGRIDTAYRVVADHIRT 325
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
++V +AD + P + LR ++R A+ S +V + G L + +A LG YPE
Sbjct: 326 LSVCIADGVSPGMSGAPLVLRRILRRAVRYSTEVLQAPPGFLGNLVPVVVA-TLGAAYPE 384
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+Q N +++++ E + + A + L G + + +
Sbjct: 385 LQK--NSVKVLIWEIANLVSEDEAAFLAS---------------------LQRGRRIIDR 421
Query: 427 QLARDPSITEISGDMAF--TLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ-KLNELKERS 483
+ R ++A+ +L G+ +++Q + K + L EQ E + R+
Sbjct: 422 TVKRLGPSDLFPAEVAWSLSLSGNLGIPLDLVQLMLEEKGVKLDTAGLEQLAQKEAQHRA 481
Query: 484 KAKAAS-------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ A+ +V ++ + + P TDD KY+Y N Y F + ++ +
Sbjct: 482 QQAEAAQEEGLCLDVHALEELHRQGIPTTDDSPKYNYSLRPNGD-YEFGLCEAQVLQL-- 538
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
++ +G ++ S+ GL+ D+TN YA GGQ D G YL T
Sbjct: 539 -------------YSETGTAVASVG--EGQRCGLLLDRTNFYAEQGGQASDRG--YLIRT 581
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
Q++ + G I+H +V G ++ VD R+GCM HT +HLLN
Sbjct: 582 GQQDVLFPVARAQVCGGFILHEAMAPECLQV--GDRVQLYVDKAWRMGCMVKHTATHLLN 639
Query: 657 AALRRVLTCTYQKSCRVFSDECALDFSVYGET-LSVDSVAAVEKYINDVIANQVQVDRRH 715
ALR+ L T ++ + E L F V +T L+ + + VE Y+ + + +
Sbjct: 640 WALRQTLGPTTEQRGSHLNPE-RLRFDVATQTPLTTEQLRTVESYVQEAVGQD-----KP 693
Query: 716 MRASELPFLTHLTVIPG-----EIYPDDV-----------ILIDISDKENVISREPCCGT 759
+ E+P L H IPG E+YPD V L S S E CCGT
Sbjct: 694 VYMEEVP-LAHTARIPGLRSLDEVYPDPVRVVSVGVPVAQALAPASQAALQTSVELCCGT 752
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
H+ +TG + +IG + G+ + +TG+ ++ A E G+ LS
Sbjct: 753 HLLSTGAVGDLVIIGDRQLVKGITRLLAITGEQAQQAREVGQSLS 797
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RVANSQKC+R GG+HNDL GRD
Sbjct: 61 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDL 120
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K++AC MA E LT+ +P DRL+ ++
Sbjct: 121 SHHTFFEMLGNWAFGGEYFKKEACSMAWELLTQ-VYGIPEDRLWVSY 166
>gi|168042124|ref|XP_001773539.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675078|gb|EDQ61577.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 937
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 274/820 (33%), Positives = 411/820 (50%), Gaps = 102/820 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R +F +F ++ HT V SSP+VP D ++ F N+GM QFK +FLG R
Sbjct: 12 VRETFNSFF-ESKNHTFVPSSPVVPVDDPTLLFANAGMNQFKPIFLGTVDPRSARGNLKR 70
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A A E LT
Sbjct: 71 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIAWAWELLTSV-YK 129
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY TYFGG + GL D+E RDIW L +P H+ G K NFWEMG +GPCG
Sbjct: 130 LPKDRLYATYFGGDENLGLAADDEARDIWRGL-LPESHVLPFGCKDNFWEMGDSGPCGPC 188
Query: 192 SEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIH+D + G +S+L VN D + +EIWN+VFI R ++ L ++DTGLGFE
Sbjct: 189 SEIHFDRIGGRDASSL--VNMDDPNCLEIWNLVFIQFNREQDGSLKVLPAQHVDTGLGFE 246
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ ++LQ K S YDTDLF P+ I+K +GA+ Y + ++D +YR+++D+ R +
Sbjct: 247 RVTSVLQEKMSNYDTDLFTPIFGAIQKATGAREYSGKVGKDDTDNVDMAYRVVADHIRTL 306
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+ A+AD P + LR ++R A+ +V K ++G L + E++G+ +PE+
Sbjct: 307 SFAIADGSRPGNEGREYVLRRMLRRAVRYGREVLKAQEG-FFSGLVDIVVEVMGEAFPEL 365
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ + KI+ I+ EE F + LVK +E+F K+
Sbjct: 366 KKNQAKIKEIISEEESSFS----------RTLVKG---IEKF----------------KK 396
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE-----R 482
A + + AF L+DT+G ++ + +A L + E F + + E +E R
Sbjct: 397 AAAEVKDGVLGAQDAFILWDTFGFPIDLTELMAEEMGLKVDKEGFNRTMEEAREKARGAR 456
Query: 483 SKAKAASNVPDID----LMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
KA + V + + L L P TDDK KY +H + P + + G
Sbjct: 457 GKAGGKALVMEAEATSQLQKLGILP-TDDKPKYIWHKN--------PTVTVKAIFTSSGF 507
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
+ D+ VG++ D T+ YA GGQI D GV
Sbjct: 508 EESTSDED---------------------VGIVLDTTSYYAEQGGQIYDTGV-----LEG 541
Query: 599 ENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
NG + E+ G ++H G++ + K++ G +VD R HT +HLLN A
Sbjct: 542 PNGAFTVREVQIYGGYVLHIGSINNGGKISVGDKVTSQVDYARRAVVAPNHTCTHLLNYA 601
Query: 659 LRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
L+ VL QK V D+ DFS +G+ + + +E + I + + V +
Sbjct: 602 LKEVLGDHIDQKGSLVAPDKLRFDFS-HGKPIDSKDLGEIEAIVAQQIRDGMTVYAKEAS 660
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDI--------SDKEN----VISREPCCGTHVFNTG 765
+E + L + GE+YPD V ++ I +D EN +S E C GTH+ NT
Sbjct: 661 LAEAKRIMGLRAVFGEVYPDPVRVVAIGRPVEDLLADPENPNWAKLSTEFCGGTHLSNTK 720
Query: 766 HIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST 805
E+ ++ + GVR + LT ++K A+ + S+
Sbjct: 721 EAEAFALVSEEGIAKGVRRVTALTMGAAKEAIHQSEVFSS 760
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 69/107 (64%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK +FLG R N+QKCIR GGKHNDL G+D
Sbjct: 34 VPVDDPTLLFANAGMNQFKPIFLGTVDPRSARGNLKRACNTQKCIRAGGKHNDLDDVGKD 93
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A A E LT LP DRLY T+
Sbjct: 94 TYHHTFFEMLGNWSFGDYFKKEAIAWAWELLTS-VYKLPKDRLYATY 139
>gi|325179830|emb|CCA14233.1| unnamed protein product [Albugo laibachii Nc14]
Length = 1022
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 270/831 (32%), Positives = 417/831 (50%), Gaps = 88/831 (10%)
Query: 10 VRLCSKSIRSSFLDYF--CNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPA 67
V + IR +F++YF + HT S P++P D ++ F+N+GM QFK +FLG
Sbjct: 57 VEWPATRIRETFINYFRKHSFHPHTFYPSCPVIPLDDPTLLFINAGMNQFKPIFLGQVDP 116
Query: 68 PYP-----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMAL 122
+P R NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ M+
Sbjct: 117 NHPMSKLQRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKQETIEMSF 176
Query: 123 EFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEM 182
LTK + +RLY TYFGG + L DEETR IWL+ +P + G K NFWEM
Sbjct: 177 NLLTKV-YQIDAERLYATYFGGDPKQQLLPDEETRAIWLKY-LPSSRVLPFGCKDNFWEM 234
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
G GPCG +EIHYD G +A A VNAD D+IEIWN VFI R ++ +VPL +
Sbjct: 235 GDIGPCGPCTEIHYDRLGNRDAA-ALVNADVPDVIEIWNNVFIQFNRENSGKLVPLPNKH 293
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRM 302
+DTG+GFERL +ILQ KTS YDTD+F PL TI+ ++ A+PY + + D +YR+
Sbjct: 294 VDTGMGFERLASILQGKTSNYDTDVFTPLFHTIQSITKAEPYEGKLGAEDANNKDMAYRV 353
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI 359
++D+ R +T A+AD + P + LR ++R A+ + +G + +L + ++
Sbjct: 354 VADHIRTLTFAIADGVMPSNDGRGYVLRRILRRAVRYGQQFLNAPKG-FLNQLVRVVVDM 412
Query: 360 LGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
+ + +PE++ N+++ + EE F +++++ +V++ V
Sbjct: 413 MHNTFPELKVKQNEVEQAILEEEESFGRTLNKGIEKFRKIVES---------------VQ 457
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
G + KQ A P+ ISG AF LYD+ G ++ Q +A + +T+ E + +++
Sbjct: 458 GARDGEKQQA--PA---ISGKDAFFLYDSMGFPLDLTQVMAEEEGMTVDVEGYGEQMKLQ 512
Query: 480 KERSKAKAASNVPD------------IDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCL 527
ERSK D L++L P T+D KY+++ L
Sbjct: 513 SERSKQDRKKGSGDNARPLVLEAQETNALLELG-IPTTNDDAKYEWN----------KAL 561
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+V I C + ++ + + +G++ D+T+ YA AGGQ+ D
Sbjct: 562 QAKVVAIFTTTDSSC------------EFVSAVTAQKHDRIGIVLDRTSFYAQAGGQVYD 609
Query: 588 IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVS-SFKVTPGLTSRVEVDARMRLGCM 646
G L + I + S G ++H G + S S +V ++ +V+ D R ++
Sbjct: 610 TG--SLEKDQPAGTRFNIDAVESYAGYVLHAGTLESGSLQVGDDISCQVDYDRRSKIAP- 666
Query: 647 RAHTTSHLLNAALRRVLTCTYQKSCRVFSD-ECALDFSVYGETLSVDSVAAVEKYINDVI 705
HT +H+LN ALR+VL + + D DF+ + LS + AVE + I
Sbjct: 667 -NHTMTHVLNFALRKVLVKNVDQRGSLVDDVRMRFDFTT-NKPLSPSQLQAVENMCENSI 724
Query: 706 ANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS--------DKENV----ISR 753
++QV ++ ++ + L + GE YPD V ++ I D EN S
Sbjct: 725 KQELQVFTKNTSQTDARRIQGLRAVFGETYPDTVRVVSIGQMIDPMLKDPENSTWSNFSV 784
Query: 754 EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
E C GTH+ NT + + G+R I TG + A + G+ L
Sbjct: 785 EFCGGTHLENTKQARKFVLYEEGAIARGIRRISAYTGQEALNAEKRGQELQ 835
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F+N+GM QFK +FLG +P R NSQKCIR GGKHNDL G+D
Sbjct: 89 IPLDDPTLLFINAGMNQFKPIFLGQVDPNHPMSKLQRAVNSQKCIRAGGKHNDLDDVGKD 148
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ M+ LTK + +RLY T+
Sbjct: 149 VYHHTFFEMLGNWSFGDYFKQETIEMSFNLLTK-VYQIDAERLYATY 194
>gi|357497975|ref|XP_003619276.1| Alanyl-tRNA synthetase, partial [Medicago truncatula]
gi|355494291|gb|AES75494.1| Alanyl-tRNA synthetase, partial [Medicago truncatula]
Length = 900
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 266/811 (32%), Positives = 410/811 (50%), Gaps = 100/811 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R +F+ +F + H KSSP+VP D ++ F N+GM Q+K +FLG + R
Sbjct: 16 VRDTFVKFF-EEKNHVYWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTVDPNTALSKLSR 74
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K +A A E LTK
Sbjct: 75 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEAISWAWELLTKV-YK 133
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DR+Y TYFGG ++ GL D E RDIWL+ +P + G K NFWEMG TGPCG
Sbjct: 134 LPSDRIYATYFGGDEKAGLAPDTEARDIWLKF-LPPGRVLPFGCKDNFWEMGDTGPCGPC 192
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
+EIH+D G +A + VN D IEIWN+VFI R + ++ L ++DTG+GFER
Sbjct: 193 TEIHFDRIGNRDAA-SLVNNDDPTCIEIWNLVFIQFNREADSSLKSLPAKHVDTGMGFER 251
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
L +ILQ K S YDTD+F+P+ + I+ +GA+PY + +D +YR+++D+ R ++
Sbjct: 252 LTSILQRKLSNYDTDVFMPIFDAIQLATGARPYSGKVGPEDADKIDMAYRVVADHIRTLS 311
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A+AD P + LR ++R A+ +V K ++G L +A +LGDV+PE++
Sbjct: 312 FAIADGSRPGNEGREYVLRRILRRAVRYGREVLKAEEG-FFNGLVNVVANVLGDVFPELK 370
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
I+ ++ EE F + ++K V Q NI+
Sbjct: 371 QQEVHIRNVIQEEEESFGRTLVKGIAKFKTAVGHV----QGNIL---------------- 410
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAA 488
SG++AF L+DTYG ++ Q +A KKL + E F + +ERS+
Sbjct: 411 ---------SGEVAFELWDTYGFPLDLTQLMAEEKKLKVDVEGFNSAMEAARERSRTAQN 461
Query: 489 SNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
+MD + TDD +K+ +F +T + I G +
Sbjct: 462 KQAGGAIVMDADATSALQKRSIVPTDDSFKF----------ASFRDHETVVKAIYTGSEF 511
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
+DS+ + + VG+I + T+ YA GGQI D G + + +
Sbjct: 512 ----------------VDSVNTDGD--VGVILESTSFYAEQGGQIFDTGSLDFHHASFQV 553
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
V++ G ++H GN ++ G +VD R HT +H+LN ALR
Sbjct: 554 HNVQV-----YGGFVLHIGNGTG---ISVGDKVVCKVDYGRRALIAPNHTCTHMLNFALR 605
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
VL QK V ++ DFS +G+ + DS+ +E +N+ I ++ V+ + + +
Sbjct: 606 EVLGNHVDQKGSIVLPEKLRFDFS-HGKPVDADSLRRIESIVNEQIQAELDVNAKEVTLA 664
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDK-ENV-----------ISREPCCGTHVFNTGHI 767
+ + L + GE+YPD V ++ + K E++ IS E C GTH+ NT
Sbjct: 665 DAKRIKGLRAVFGEVYPDPVRVVSVGQKVEDLLADPDNEKWLSISSELCGGTHISNTREA 724
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
++ ++ + G+R I +T D + A++
Sbjct: 725 KAFALLAEEGIAKGIRRITAVTTDRASDAMK 755
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K +FLG + R N+QKCIR GGKHNDL G+D
Sbjct: 38 VPVNDPTLLFANAGMNQYKPIFLGTVDPNTALSKLSRACNTQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K +A A E LTK LP DR+Y T+
Sbjct: 98 TYHHTFFEMLGNWSFGDYFKEEAISWAWELLTK-VYKLPSDRIYATY 143
>gi|410917664|ref|XP_003972306.1| PREDICTED: alanine--tRNA ligase, mitochondrial-like [Takifugu
rubripes]
Length = 975
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 272/815 (33%), Positives = 407/815 (49%), Gaps = 87/815 (10%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+RS+F+++F H LV SSP+ P D S+ FVN+GM QFK + LG A Y R
Sbjct: 31 VRSTFVEFFRQKYEHLLVPSSPVRPRLDPSLLFVNAGMNQFKPILLGTVDPRSKMASYRR 90
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V NSQKCVR GGKHNDL GRD YHHTFFEMLGNWSF DY+K +AC MA LT+
Sbjct: 91 VVNSQKCVRAGGKHNDLEDVGRDVYHHTFFEMLGNWSFGDYFKEEACSMAWSLLTEH-YG 149
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P RLY +YF G GLP DEETR +WL++GVP + G+K NFWEMG +GPCG
Sbjct: 150 IPASRLYVSYFAGDAASGLPADEETRHVWLDIGVPPSRLLAFGLKDNFWEMGDSGPCGPC 209
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
+EIHYD G +A A VNA+ DL+EIWN+VF+ + R ++ L + +DTG+G ER
Sbjct: 210 TEIHYDHVGGRDAA-ALVNANDPDLVEIWNLVFMQYNREVNGSLCLLPQFSVDTGMGLER 268
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV +LQ K S YDTDLF PLL I++ S PY + T++ +D +YR+++D+ R +T
Sbjct: 269 LVRVLQGKRSNYDTDLFTPLLHAIQQRSKVGPYRGSMGTADAGRVDMAYRVVADHIRTLT 328
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI- 367
V +AD ++P + LR ++R A+ +V + G L L + ILG+VYPE+
Sbjct: 329 VCIADGVYPGMSGAELVLRRILRRAVRFCNEVLQTPPGTLAS-LVPTVCHILGNVYPELH 387
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
Q+S I +I E +L++ + + L K
Sbjct: 388 QESNTIINIINENELHFLSSLQQGSRVIHRTLSK-------------------------- 421
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE-------LK 480
+D +A++L+ G +++ + + + + H+ + E L+
Sbjct: 422 --KDYKHGVFPAAVAWSLHRDLGFPLDLVDLMLEERGVRVDHQELNILITENNKVRGRLQ 479
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
++K +V + + P TDD KY YH + ++ Y FP ++ + G +
Sbjct: 480 SCDESKLTLDVATLAELQRLRVPHTDDSLKYQYHLEGDT--YVFPQCHATVLALYDGQTL 537
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
++ +I D+T Y GGQ D G Y T +
Sbjct: 538 VA------------------EVPEGRRCSVILDQTCFYTEQGGQSHDHG--YFTKNELPD 577
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
+ + + G +VH V ++ + G ++ +D RL CM HT +H+LN ALR
Sbjct: 578 MPYTVETVIQVGGYVVH--QVTATDHLKTGDQVQLHLDKIHRLACMVKHTGTHILNFALR 635
Query: 661 RVLTCTYQ-KSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
VL T Q + V +D DFSV +LSV + V+K ++D+I+ + + +
Sbjct: 636 NVLGPTVQQRGSHVSADRLRFDFSVMA-SLSVCELQRVDKQVSDIISANHSIYSQEIPLR 694
Query: 720 ELPFLTHLTVIPGEIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGHIE 768
+ L + E+YPD V +L+ D++ + E CCGTH+ TG I
Sbjct: 695 MARNIQGLRTV-DEVYPDPVRVVSVAVPVSDLLVGQPDRQTSV--ELCCGTHLLQTGAIR 751
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+I + G+ I +TG + A E G+ L
Sbjct: 752 DLLIISEQQIVRGMSRIIAVTGQEAIRAREAGQLL 786
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 70/106 (66%), Gaps = 6/106 (5%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P D S+ FVN+GM QFK + LG A Y RV NSQKC+R GGKHNDL GRD
Sbjct: 55 PRLDPSLLFVNAGMNQFKPILLGTVDPRSKMASYRRVVNSQKCVRAGGKHNDLEDVGRDV 114
Query: 874 YHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K +AC MA LT+ +P RLY ++
Sbjct: 115 YHHTFFEMLGNWSFGDYFKEEACSMAWSLLTE-HYGIPASRLYVSY 159
>gi|421855|pir||S32671 alanine-tRNA ligase (EC 6.1.1.7) - Arabidopsis thaliana (fragment)
Length = 989
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 272/812 (33%), Positives = 415/812 (51%), Gaps = 98/812 (12%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP- 66
S + +K +R +++D+F +GH SSP+VP+ D ++ F N+GM Q+K +FLG
Sbjct: 41 SETQWPAKRVRDTYVDFF-RGKGHKFWPSSPVVPHNDPTLLFANAGMNQYKPIFLGTADP 99
Query: 67 ----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMAL 122
+ R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A A
Sbjct: 100 NTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEWAW 159
Query: 123 EFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEM 182
E LTK LP DR+Y TYFG ++ GL D E RDIWL++ +P + G K NFWEM
Sbjct: 160 ELLTKV-YGLPTDRIYATYFGRDEKAGLQPDNEARDIWLKV-LPSGRVLPFGCKDNFWEM 217
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
G TGPCG +EIHYD G +A + VN D +EIWN+VFI R S ++ PL +
Sbjct: 218 GDTGPCGPCTEIHYDRIGNRDAA-SLVNNDDPTCLEIWNLVFIQFNRESDGSLKPLPAKH 276
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRM 302
+DTG+GFERL ++LQNK S YDTD+F+P+ + I+K +GA+PY + +D +YR+
Sbjct: 277 VDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVGPEDVDRVDMAYRV 336
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI 359
++D+ R ++ A+AD P + LR ++R A+ +++ K ++G L ++ +
Sbjct: 337 VADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGKEILKAEEG-FFNGLVSSVIRV 395
Query: 360 LGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
+GDV+ E+++ KI I+ EE F K L K +E+F
Sbjct: 396 MGDVFTELKEHEKKITDIIKEEEASF----------CKTLAKG---IEKF---------- 432
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
++ + +SGD AF L+DTYG ++ Q +A + L + + F + + E
Sbjct: 433 ------RKAGQAVQGNTLSGDDAFILWDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEA 486
Query: 480 KERS-----KAKAASNVPDIDLMDLKH---FPVTDDKYKYDYHYDTNSKRYTFPCLDTNL 531
+ERS K + V D D H TDD +KY + D S+ L
Sbjct: 487 RERSRSAQNKQAGGAIVMDADATSTLHKAGVSATDDSFKYIWFQDHESE----------L 536
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
I G S A+ D+ VGL+ T+ YA GGQI D G+
Sbjct: 537 KAIYTGSTFL----------ESSAASDN--------VGLVLGSTSFYAEQGGQIFDTGLI 578
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ T V+I G ++H G + + +V+ G +VD R HT
Sbjct: 579 EGSFGTFNVCNVQI-----FGGFVLHIGYLSKETGEVSVGDKVICKVDYERRKLIAPNHT 633
Query: 651 TSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H+LN AL+ VL QK V ++ DFS +G+ + + + +E +N I +++
Sbjct: 634 CTHMLNYALKEVLGDHIDQKGSIVLPEKLRFDFS-HGKPVDPEDLRRIESIVNKQIKDEL 692
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKEN----VISREPCC 757
V + SE + L + GE YPD V ++ I +D EN ++S E C
Sbjct: 693 DVFSKEAVLSEAKRIKGLRAVFGEAYPDPVRVVSIGRKVEDLLADPENNEWSLLSSEFCG 752
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLT 789
GTH+ NT ++ ++ + G+R + +T
Sbjct: 753 GTHITNTREAKAFALLSEEGIAKGIRRVTAVT 784
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + R N+QKCIR GGKHNDL G+D
Sbjct: 72 VPHNDPTLLFANAGMNQYKPIFLGTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKD 131
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A A E LTK LP DR+Y T+
Sbjct: 132 TYHHTFFEMLGNWSFGDYFKKEAIEWAWELLTK-VYGLPTDRIYATY 177
>gi|291390471|ref|XP_002711725.1| PREDICTED: alanyl-tRNA synthetase [Oryctolagus cuniculus]
Length = 945
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 276/825 (33%), Positives = 406/825 (49%), Gaps = 105/825 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYVHSSGTIPLDDPTLLFANAGMNQFKPIFLNTIDPTHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TY D LP + MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYL--DDTKILPGN---------------------MKDNFWEMGDTG 159
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 160 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRETDGVLKPLPKKSIDTG 218
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 219 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDVDGIDMAYRVLADH 278
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ S + +G L + + LGD
Sbjct: 279 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDA 337
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 338 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 369
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 370 LDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 429
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + K TDD KY+Y D+ S Y F + V V+
Sbjct: 430 QGKGAGGEDLIMLDIYAIEELRAKGLEATDDSPKYNYQADS-SGSYVF----ESTVATVL 484
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 485 ---ALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 530
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G V S +V G R+ +D R M HT +H+L
Sbjct: 531 SSEDKTEFTVKNAQVRGGYVLHIGTVYGSLRV--GDQVRLFIDEPRRRPVMSNHTATHIL 588
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
N ALR VL QK V D DF+ G +S + E+ N++IA V +
Sbjct: 589 NFALRSVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIAAAKPVYTQD 647
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFN 763
+ + L + E YPD V ++ I + + +P C GTH+ N
Sbjct: 648 CALAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLEDPSGPAGSLTSVEFCGGTHLRN 707
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+ H ++ ++ G+R I +TG ++ A+ + L + S
Sbjct: 708 SSHAGDFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLS 752
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 75/109 (68%), Gaps = 6/109 (5%)
Query: 816 GNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAG 870
G IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G
Sbjct: 30 GTIPLDDPTLLFANAGMNQFKPIFLNTIDPTHPMAKLSRAANTQKCIRAGGKHNDLDDVG 89
Query: 871 RDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+D YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 90 KDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIERLYVTY 137
>gi|355561749|gb|EHH18381.1| hypothetical protein EGK_14961 [Macaca mulatta]
gi|380790281|gb|AFE67016.1| alanine--tRNA ligase, mitochondrial [Macaca mulatta]
gi|380790283|gb|AFE67017.1| alanine--tRNA ligase, mitochondrial [Macaca mulatta]
gi|380790285|gb|AFE67018.1| alanine--tRNA ligase, mitochondrial [Macaca mulatta]
gi|380790287|gb|AFE67019.1| alanine--tRNA ligase, mitochondrial [Macaca mulatta]
gi|380790289|gb|AFE67020.1| alanine--tRNA ligase, mitochondrial [Macaca mulatta]
Length = 985
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 276/811 (34%), Positives = 409/811 (50%), Gaps = 86/811 (10%)
Query: 21 FLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANS 75
FL++F + GH LV S+ + P GD S+ FVN+GM QFK +FLG A + RVANS
Sbjct: 46 FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105
Query: 76 QKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPL 134
QKCVR GG+HNDL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P
Sbjct: 106 QKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPT 164
Query: 135 DRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEI 194
+RL+ +YF G + GL D ETRDIWL LGVP + G + NFWEMG+TGPCG +EI
Sbjct: 165 ERLWVSYFDGDPKAGLEPDLETRDIWLSLGVPATRVLSFGPQENFWEMGNTGPCGPCTEI 224
Query: 195 HYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVT 254
HYD+ G L+E+WN+VF+ H R + ++ PL + ++DTG+G ERLV
Sbjct: 225 HYDLAG---------GVGAPQLVELWNLVFMQHNREADGSLQPLPQWHVDTGMGLERLVA 275
Query: 255 ILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVAL 314
+LQ K STYDTDLF PLL I++ A PY ++ DT+YR+++D+ R ++V +
Sbjct: 276 VLQGKHSTYDTDLFSPLLHAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCI 335
Query: 315 ADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSI 371
+D +FP + LR ++R A+ S ++ K G + L + E LGD YPE+Q +
Sbjct: 336 SDGVFPGMSGPPLVLRRILRRAVRFSMEILKAPPG-FLGSLVPVVVETLGDAYPELQRNS 394
Query: 372 NKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLAR 430
+I L+L +E+ +L + + + +T L ++ P V L+ L
Sbjct: 395 AQISNLVLEDEAAFLASLERGR----RIIDRTLRTLGPSDMF--PAEVAWSLSLSGDLGL 448
Query: 431 DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASN 490
+ E+ + D+ GL + L EA + + + + K +
Sbjct: 449 PLDMVELMLEEKGVQLDSTGLER-------------LAQEAAQHQARQAEPVQKQGLWLD 495
Query: 491 VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRH 550
V + + + P TD KY+Y N Y F + ++ Q++ D A+
Sbjct: 496 VHALGELQHQGVPPTDSSPKYNYSLRPNGS-YEFGTCEAQVL------QLYTEDGTAV-- 546
Query: 551 ARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELAS 610
AS+ Q GL+ D+TN YA GGQ D G YL QE+ +
Sbjct: 547 ----ASVGKGQR-----CGLLLDRTNFYAEQGGQASDRG--YLVRVGQEDVLFPVARAQV 595
Query: 611 LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQK 669
G I+H ++ G ++ VD RL CM HT +HLLN ALR+ L T Q+
Sbjct: 596 CGGFILHEAVAPECLQI--GDQVQLHVDKAWRLACMAKHTATHLLNWALRQTLGPGTEQQ 653
Query: 670 SCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTV 729
+ ++ LD + L+ + + AVE + + VQ D + + E+P L
Sbjct: 654 GSHLNPEQLRLDVTTQ-TALTPERLRAVENTVQEA----VQQD-KPVYMEEVP-LALTAQ 706
Query: 730 IPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
+PG E+YPD V L S S E CCGTH+ TG + +I
Sbjct: 707 VPGLRCLDEVYPDPVRVVSVGVPVAHALDPASQAALQTSVELCCGTHLLRTGAVGDLVII 766
Query: 774 GYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
G + + G + +TG+ ++ A E G++L+
Sbjct: 767 GDRQLSKGTTRLLAITGEQAQQARELGQNLA 797
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 74/107 (69%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RVANSQKC+R GG+HNDL GRD
Sbjct: 66 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P +RL+ ++
Sbjct: 126 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPTERLWVSY 171
>gi|109071333|ref|XP_001099647.1| PREDICTED: probable alanyl-tRNA synthetase, mitochondrial [Macaca
mulatta]
Length = 985
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 276/811 (34%), Positives = 409/811 (50%), Gaps = 86/811 (10%)
Query: 21 FLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANS 75
FL++F + GH LV S+ + P GD S+ FVN+GM QFK +FLG A + RVANS
Sbjct: 46 FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105
Query: 76 QKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPL 134
QKCVR GG+HNDL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P
Sbjct: 106 QKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPT 164
Query: 135 DRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEI 194
+RL+ +YF G + GL D ETRDIWL LGVP + G + NFWEMG+TGPCG +EI
Sbjct: 165 ERLWVSYFDGDPKAGLEPDLETRDIWLSLGVPATRVLSFGPQENFWEMGNTGPCGPCTEI 224
Query: 195 HYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVT 254
HYD+ G L+E+WN+VF+ H R + ++ PL + ++DTG+G ERLV
Sbjct: 225 HYDLAG---------GVGAPQLVELWNLVFMQHNREADGSLQPLPQWHVDTGMGLERLVA 275
Query: 255 ILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVAL 314
+LQ K STYDTDLF PLL I++ A PY ++ DT+YR+++D+ R ++V +
Sbjct: 276 VLQGKHSTYDTDLFSPLLHAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCI 335
Query: 315 ADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSI 371
+D +FP + LR ++R A+ S ++ K G + L + E LGD YPE+Q +
Sbjct: 336 SDGVFPGMSGPPLVLRRILRRAVRFSMEILKAPPG-FLGSLVPVVVETLGDAYPELQRNS 394
Query: 372 NKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLAR 430
+I L+L +E+ +L + + + +T L ++ P V L+ L
Sbjct: 395 AQISNLVLEDEAAFLASLERGR----RIIDRTLRTLGPSDMF--PAEVAWSLSLSGDLGL 448
Query: 431 DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASN 490
+ E+ + D+ GL + L EA + + + + K +
Sbjct: 449 PLDMVELMLEEKGVQLDSTGLER-------------LAQEAAQHQARQAEPVQKQGLWLD 495
Query: 491 VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRH 550
V + + + P TD KY+Y N Y F + ++ Q++ D A+
Sbjct: 496 VHALGELQHQGVPPTDSSPKYNYSLRPNGS-YEFGTCEAQVL------QLYTEDGTAV-- 546
Query: 551 ARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELAS 610
AS+ Q GL+ D+TN YA GGQ D G YL QE+ +
Sbjct: 547 ----ASVGKGQR-----CGLLLDRTNFYAEQGGQASDRG--YLVRVGQEDVLFPVARAQV 595
Query: 611 LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQK 669
G I+H ++ G ++ VD RL CM HT +HLLN ALR+ L T Q+
Sbjct: 596 CGGFILHEAVAPECLQI--GDQVQLHVDKAWRLACMAKHTATHLLNWALRQTLGPGTEQQ 653
Query: 670 SCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTV 729
+ ++ LD + L+ + + AVE + + VQ D + + E+P L
Sbjct: 654 GSHLNPEQLRLDVTTQ-TALTPERLRAVENTVQEA----VQQD-KPVYMEEVP-LALTAQ 706
Query: 730 IPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
+PG E+YPD V L S S E CCGTH+ TG + +I
Sbjct: 707 VPGLRCLDEVYPDPVRVVSVGVPVAHALDPASQAALQTSVELCCGTHLLRTGAVGDLVII 766
Query: 774 GYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
G + + G + +TG+ ++ A E G++L+
Sbjct: 767 GDRQLSKGTTRLLAITGEQAQQARELGQNLA 797
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 74/107 (69%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RVANSQKC+R GG+HNDL GRD
Sbjct: 66 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P +RL+ ++
Sbjct: 126 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPTERLWVSY 171
>gi|260784931|ref|XP_002587517.1| hypothetical protein BRAFLDRAFT_237056 [Branchiostoma floridae]
gi|229272665|gb|EEN43528.1| hypothetical protein BRAFLDRAFT_237056 [Branchiostoma floridae]
Length = 751
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 267/797 (33%), Positives = 385/797 (48%), Gaps = 89/797 (11%)
Query: 10 VRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP--- 66
+ L +R F+ YF H V SS +P D ++ F N+GM QFK +F G
Sbjct: 4 LNLTGDQVRDMFIKYFEEKHEHLEVHSSSTIPLDDPTLLFANAGMNQFKPIFQGTVDPSH 63
Query: 67 --APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEF 124
A Y RV NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++AC A +
Sbjct: 64 PMAKYRRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEACSWAWDL 123
Query: 125 LTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGS 184
L L ++R+Y TYFGG++ GL D E R IWL+LGV D I MK NFWEMG
Sbjct: 124 LVNG-YKLEVERMYVTYFGGNEAQGLQPDLECRQIWLDLGVAEDRILPGSMKDNFWEMGE 182
Query: 185 TGPCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYI 243
GPCG SEIHYD + G +S L VN D +++EIWN+VF+ + R +I L K I
Sbjct: 183 VGPCGPCSEIHYDRVGGRDASHL--VNMDVPEVLEIWNLVFMQNNREPDGSITNLPKKNI 240
Query: 244 DTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRML 303
D G+G ER+++++Q S YDTDLF P + I+K +G +PY + +D +YR+L
Sbjct: 241 DCGMGLERILSVVQGVLSNYDTDLFTPFFDAIQKATGVRPYTGKVGADDADGIDMAYRVL 300
Query: 304 SDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL 360
+D++R +T++++D PD + LR ++R + + + +G + + + L
Sbjct: 301 ADHARTLTISMSDGGKPDNVGRGYVLRRILRRGVRYATEKLNAPRGFFASLVDVAV-QTL 359
Query: 361 GDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
G +PEI ++ I+ EE F +KT L G
Sbjct: 360 GSAFPEITKDPQMVKDIINEEEEQF--------------LKT--------------LSRG 391
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
+ L K++ + + G+ A+ LYDTYG ++ +A K LTL A+E+ + +
Sbjct: 392 RRVLEKRITQLGDSKVVPGETAWLLYDTYGFPVDLTSLMAEEKGLTLDCAAYEECKKQAQ 451
Query: 481 ERSKAKAAS-------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
RS+ K A +V I+ + K P TDD KY Y +D N PC T +
Sbjct: 452 IRSQGKGAGVDDSVNLDVHAINELQEKGSPPTDDSPKYQYSHDDNGNYVFQPCTATVV-- 509
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
DK ++ G G++ D+TN YA GGQI D G YL
Sbjct: 510 ------SLRRDKQFVQEVTQGQE-----------CGVLLDRTNFYAEQGGQIYDEG--YL 550
Query: 594 TNTTQENGKVEIGELASLE-----GKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA 648
E + E G ++H G +V + V G ++ VD R M
Sbjct: 551 VKEEDEVKRTAETEFTVKNCQVRGGYVMHIGTLVGTLNV--GDKVKLFVDEARRRPIMSN 608
Query: 649 HTTSHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
HT++H+LN ALR+VL Q+ V D DFS G ++ + EK N++I
Sbjct: 609 HTSTHVLNFALRQVLGEADQRGSLVAPDRLRFDFSAKG-AMTTAQIKEAEKICNEIIKKN 667
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPC 756
QV + ++ + L + E YPD V ++ I S V S E C
Sbjct: 668 EQVYAKEAALAQAKAIQGLRAVFDETYPDPVRVLSIGISVEDMLSDPTSPAGTVTSVEFC 727
Query: 757 CGTHVFNTGHIESCTVI 773
GTH+ GH ++
Sbjct: 728 GGTHLQRVGHAGDLVIV 744
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 82/142 (57%), Gaps = 18/142 (12%)
Query: 788 LTGDSSKAAV-----ENGKHLSTAASFSQILNVGNIPYGDDSIAFVNSGMCQFKNVFLGL 842
LTGD + E +HL +S + IP D ++ F N+GM QFK +F G
Sbjct: 6 LTGDQVRDMFIKYFEEKHEHLEVHSSST-------IPLDDPTLLFANAGMNQFKPIFQGT 58
Query: 843 TP-----APYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACR 897
A Y RV NSQKCIR GGKHNDL G+D YHHTFFEMLGNWSF DY+K++AC
Sbjct: 59 VDPSHPMAKYRRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEACS 118
Query: 898 MALEFLTKPPVSLPLDRLYFTF 919
A + L L ++R+Y T+
Sbjct: 119 WAWDLLVN-GYKLEVERMYVTY 139
>gi|358342377|dbj|GAA28662.2| alanyl-tRNA synthetase [Clonorchis sinensis]
Length = 931
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 267/780 (34%), Positives = 399/780 (51%), Gaps = 77/780 (9%)
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A + R N+QKC+R GGKHNDL GRD YHHTFFEMLGNWSF DY+K++AC A + LT
Sbjct: 2 AGWKRAVNTQKCIRAGGKHNDLDDVGRDVYHHTFFEMLGNWSFGDYFKKEACVWAWQLLT 61
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P +RLY TYFGG++ GLP DEE RDIWL +G+P++ + GMK NFWEMG TG
Sbjct: 62 EV-WKIPKERLYVTYFGGTESTGLPPDEEARDIWLSIGLPKERVLPFGMKDNFWEMGETG 120
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A + VN D D++EIWN+VFI R ++ PL +IDTG
Sbjct: 121 PCGPCSEIHYDRIGGRDAA-SLVNMDDPDVLEIWNLVFIQFNREEDGSLRPLPAKHIDTG 179
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LGFER++++LQ K S YDTDLF PL I+ +GA PY + D +YR+L+D+
Sbjct: 180 LGFERILSVLQGKRSNYDTDLFQPLFAAIQSGTGAPPYSGRVGAEDVDGKDMAYRVLADH 239
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R++T+AL+D T + LR ++R A+ + +V G L + L D
Sbjct: 240 ARVLTIALSDGGRAQNTGRGYVLRRILRRAVRYAVEVLGAPPG-FFATLVDVVVTSLKDA 298
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE+ + ++ ++ EE + F K + + L +T ++++ G+
Sbjct: 299 FPELANDPYTVKELINEEEQQFLTTLK---RGQRLLSRTISDIKRTQGAAGTGV------ 349
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE--QKLNELKE 481
+ G +A+ LYDTYG ++ Q +A L L +E ++L + +
Sbjct: 350 -------------LPGTVAWRLYDTYGFPLDLTQLMAEEHNLKLDLAGYEKAKELAQARS 396
Query: 482 RSKAKAASNVPDIDLMDLKHF-----PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
++ A A + D+D+ + P TDD KY+Y D Y FP ++ ++ I
Sbjct: 397 QTGAAGAGAIVDLDVHAIAELRKQGIPGTDDTEKYNYQADAQGN-YAFPEIEATILSIR- 454
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
+ +F D ++SG QL G I DKT YA AGGQ+ D G ++T
Sbjct: 455 QESMFVPDV-----SQSG------QL-----CGFILDKTIFYAEAGGQLYDTG--FITKI 496
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+ + ++ + ++ G ++H G + F + G R+ +D R G MR HT +H+LN
Sbjct: 497 SDDACELCVTDVQYRGGYVLHIGRLEGHFAI--GDKVRMCIDGVRRSGLMRNHTGTHVLN 554
Query: 657 AALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR+VL QK V D DF+ +S D + E+ V+ + V ++
Sbjct: 555 FALRKVLGEADQKGSLVAPDRLRFDFTAK-RGMSRDEIRDAEEVARTVLESNAPVYAANV 613
Query: 717 RASELPFLTHLTVIPGEIYPD-----------DVILIDISDKE-NVISREPCCGTHVFNT 764
+ L + GE+YPD D ++ D + N S E C GTHV N
Sbjct: 614 SLPVGKSIQGLRAVFGEVYPDPVRVVSVAVPVDKLVADPTGPAGNTTSVEFCGGTHVHNV 673
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGK-------HLSTAASFSQILNVGN 817
HI S ++ ++ G+R I LTG + A + HLS A + L + N
Sbjct: 674 KHIGSLVIVSEEAIAKGIRRIVALTGHEGERAQREAQELEHEVSHLSGAIHMASSLTLAN 733
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Query: 845 APYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 904
A + R N+QKCIR GGKHNDL GRD YHHTFFEMLGNWSF DY+K++AC A + LT
Sbjct: 2 AGWKRAVNTQKCIRAGGKHNDLDDVGRDVYHHTFFEMLGNWSFGDYFKKEACVWAWQLLT 61
Query: 905 KPPVSLPLDRLYFTF 919
+ +P +RLY T+
Sbjct: 62 E-VWKIPKERLYVTY 75
>gi|295672445|ref|XP_002796769.1| alanyl-tRNA synthetase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283749|gb|EEH39315.1| alanyl-tRNA synthetase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 962
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 278/818 (33%), Positives = 413/818 (50%), Gaps = 90/818 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R++FLD+F + GHT V SS +VP D ++ F N+GM Q+K +FLG A R
Sbjct: 17 VRNAFLDFFKDN-GHTFVPSSSVVPLSDPTLLFANAGMNQYKAIFLGTVEPNSDFAQLKR 75
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
N+QKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A R + + LTK
Sbjct: 76 AHNTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIRYSWDLLTKV-YG 134
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYF G+ G+ D E RD+WL +GV DH+ MK NFWEMG GPCG
Sbjct: 135 LDPDRLYVTYFEGNPDAGIEPDLEARDLWLSVGVAEDHLLSGNMKDNFWEMGEQGPCGPC 194
Query: 192 SEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIHYD + G +S L VN D +++EIWN VFI + R ++ L +IDTG+G+E
Sbjct: 195 SEIHYDRIGGRNASHL--VNQDDPNVLEIWNNVFIQYNREQDKSLRSLPNKHIDTGMGYE 252
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV+ILQNK+S YDTD+F PL E I +++G++PY F + +DT+YR+++D+ R +
Sbjct: 253 RLVSILQNKSSNYDTDVFTPLFEKIREITGSRPYTGKFHEEDVDGVDTAYRVVADHIRTL 312
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
T A++D P+ + +R V+R + V+ G ++ + E +GD++PEI
Sbjct: 313 TFAISDGAVPNNEGRGYVVRRVLRRGARYARKYLNVEIGGFFSQIVPTLVEQMGDMFPEI 372
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ + IL EE F K L + + E++ +
Sbjct: 373 KRKATDVMEILDEEEISFA----------KTLDRGERLFEEYALQ--------------- 407
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK--A 485
A+ + + G + LYDT+G ++ Q +A + L + + FE+ KE SK
Sbjct: 408 -AKQKGLDRLHGADVWRLYDTFGFPVDLTQLMAEERGLKIDNGEFEEARLRAKEASKGQG 466
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
K +V + + DL DD K D +S ++ + + +
Sbjct: 467 KLTKDVVKLTVHDLGLLETMDDVPKTD-----DSAKFGRGNITSQI-------------- 507
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE- 604
AI H + + S + G+I D+TN YA GGQ D G + +GK E
Sbjct: 508 KAIYHNKKFVN-SSKDIPEGEQFGIILDRTNFYAEQGGQEYDTGKIII------DGKAEL 560
Query: 605 -IGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
+ ++ G ++H G + SF V + + E D R HT +H+LN ALR+V
Sbjct: 561 TVEDVQVYGGYVLHTGFMKYGSFNVNDSVIA--EYDELRRWPIRNNHTGTHILNFALRKV 618
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L QK V +++ DFS + +S + +E+ D I V + + S
Sbjct: 619 LGDGVEQKGSLVAAEKLRFDFS-HKSAVSDSDLEEIERISTDYIRQNCAVYGKDVPLSIA 677
Query: 722 PFLTHLTVIPGEIYPDDV-----------ILIDISD-KENVISREPCCGTHVFNTGHIES 769
+T + + GE YPD V IL D+ D + IS E C GTHV TG I+
Sbjct: 678 REITGVRAVFGETYPDPVRVVSVGVELEEILKDVHDPRWKEISIEFCGGTHVQKTGDIKD 737
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHL 803
++ G+R I +TG+ + + A E G+ L
Sbjct: 738 LVILEESGIAKGIRRIIAVTGEEAHEVQRIAKEFGERL 775
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K +FLG A R N+QKCIR GGKHNDL G+D
Sbjct: 39 VPLSDPTLLFANAGMNQYKAIFLGTVEPNSDFAQLKRAHNTQKCIRAGGKHNDLDDVGKD 98
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A R + + LTK L DRLY T+
Sbjct: 99 SYHHTFFEMLGNWSFGDYFKKEAIRYSWDLLTK-VYGLDPDRLYVTY 144
>gi|326471957|gb|EGD95966.1| alanyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
Length = 963
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 283/834 (33%), Positives = 413/834 (49%), Gaps = 95/834 (11%)
Query: 4 PNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG 63
P V + +R +FLDYF GHT V SS +VP D ++ F N+GM Q+K++FLG
Sbjct: 10 PAGQETVEWPALRVRDTFLDYF-KKNGHTFVPSSSVVPLSDPTLLFANAGMNQYKSIFLG 68
Query: 64 LTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDAC 118
A R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 69 TVDPNSDFAQLKRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAI 128
Query: 119 RMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCN 178
+ + E LTK L DRLY TYF G++ G+ D E RDIW +GV DHI MK N
Sbjct: 129 QFSWELLTKV-YGLDPDRLYVTYFEGNEAAGVGPDIEARDIWRSVGVKDDHILTGDMKDN 187
Query: 179 FWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
FWEMG GPCG SEIHYD G ++A VN D D++EIWN VFI + R ++ PL
Sbjct: 188 FWEMGDQGPCGPCSEIHYDRIGGRNAAHL-VNQDDPDVLEIWNNVFIQYNREPDRSLRPL 246
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
++DTGLG+ERLV+ILQNK+S YDTD+F PL I+ ++GA+PY F + +DT
Sbjct: 247 PNQHVDTGLGYERLVSILQNKSSNYDTDVFSPLFTAIQNITGARPYTGKFGAEDADGIDT 306
Query: 299 SYRMLSDYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYN 355
+YR+++D+ R +T A+ D P+ +R V+R + + +V+ G +L
Sbjct: 307 AYRVVADHLRTLTFAITDGAAPNNEGRGYVVRRVLRRGVRYARKYLQVEIGSFFSKLVPA 366
Query: 356 IAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
+ E +GD++PEI+ + IL EE F K L + + + E +
Sbjct: 367 LVEQMGDMFPEIKRKQTDVMEILDEEEVSFA----------KTLDRGERQFENY------ 410
Query: 416 GLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQK 475
Q A D ++ G + LYDT+G ++ + +A ++LT+ FE+
Sbjct: 411 ----------AQQALDSGAGKLHGADVWRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEA 460
Query: 476 LNELKERSK--AKAASN-----VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLD 528
+ KE SK AK AS+ V + ++ P T+D K+
Sbjct: 461 RLKAKEASKGQAKTASDLLKLTVHTLSTLEKNGVPKTNDDAKF----------------- 503
Query: 529 TNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI 588
IV + C K I + + N +G+I DKTN YA GGQ D
Sbjct: 504 -RKGNIVANIKAICHGKEVIDSTKD--------IPANEQIGIILDKTNFYAEQGGQEYDT 554
Query: 589 GVAYLTNTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMR 647
G + + +++ + G ++H G + +F V + + E D R
Sbjct: 555 GKIVIDGQAE----LDVQNVQMYGGYVLHTGFIKYGNFSVNDSVIA--EYDELRRWPIRN 608
Query: 648 AHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIA 706
HT +H+LN ALR VL QK V +++ DFS + +S + +E D I
Sbjct: 609 NHTGTHILNFALREVLGDGVDQKGSLVAAEKLRFDFS-HKSAISDSDLEKIEAKSTDYIR 667
Query: 707 NQVQVDRRHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISD-KENVISRE 754
V + + + +T + + GE YPD D IL ++ D + +S E
Sbjct: 668 QNCAVYSQEVPLATAREITGVRAVFGETYPDPVRVVSVGVELDEILKNVKDPRWEGVSIE 727
Query: 755 PCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHLS 804
C GTHV TG I+ ++ G+R I +TG+ + + A E G+ L+
Sbjct: 728 FCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQRIAREFGERLN 781
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 45 VPLSDPTLLFANAGMNQYKSIFLGTVDPNSDFAQLKRAHNSQKCIRAGGKHNDLDDVGKD 104
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + + E LTK L DRLY T+
Sbjct: 105 SYHHTFFEMLGNWSFGDYFKKEAIQFSWELLTK-VYGLDPDRLYVTY 150
>gi|326477176|gb|EGE01186.1| alanyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
Length = 963
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 283/834 (33%), Positives = 413/834 (49%), Gaps = 95/834 (11%)
Query: 4 PNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG 63
P V + +R +FLDYF GHT V SS +VP D ++ F N+GM Q+K++FLG
Sbjct: 10 PAGQETVEWPALRVRDTFLDYF-KKNGHTFVPSSSVVPLSDPTLLFANAGMNQYKSIFLG 68
Query: 64 LTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDAC 118
A R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 69 TVDPNSDFAQLKRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAI 128
Query: 119 RMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCN 178
+ + E LTK L DRLY TYF G++ G+ D E RDIW +GV DHI MK N
Sbjct: 129 QFSWELLTKV-YGLDPDRLYVTYFEGNEAAGVGPDIEARDIWRSVGVKDDHILTGDMKDN 187
Query: 179 FWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
FWEMG GPCG SEIHYD G ++A VN D D++EIWN VFI + R ++ PL
Sbjct: 188 FWEMGDQGPCGPCSEIHYDRIGGRNAAHL-VNQDDPDVLEIWNNVFIQYNREPDRSLRPL 246
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
++DTGLG+ERLV+ILQNK+S YDTD+F PL I+ ++GA+PY F + +DT
Sbjct: 247 PNQHVDTGLGYERLVSILQNKSSNYDTDVFSPLFTAIQNITGARPYTGKFGAEDADGIDT 306
Query: 299 SYRMLSDYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYN 355
+YR+++D+ R +T A+ D P+ +R V+R + + +V+ G +L
Sbjct: 307 AYRVVADHLRTLTFAITDGAAPNNEGRGYVVRRVLRRGVRYARKYLQVEIGSFFSKLVPA 366
Query: 356 IAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
+ E +GD++PEI+ + IL EE F K L + + + E +
Sbjct: 367 LVEQMGDMFPEIKRKQTDVMEILDEEEVSFA----------KTLDRGERQFENY------ 410
Query: 416 GLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQK 475
Q A D ++ G + LYDT+G ++ + +A ++LT+ FE+
Sbjct: 411 ----------AQQALDSGAGKLHGADVWRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEA 460
Query: 476 LNELKERSK--AKAASN-----VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLD 528
+ KE SK AK AS+ V + ++ P T+D K+
Sbjct: 461 RLKAKEASKGQAKTASDLLKLTVHTLSTLEKNGVPKTNDDAKFGKG-------------- 506
Query: 529 TNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI 588
IV + C K I + + N +G+I DKTN YA GGQ D
Sbjct: 507 ----NIVANIKAICHGKEVIDSTKD--------IPANEQIGIILDKTNFYAEQGGQEYDT 554
Query: 589 GVAYLTNTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMR 647
G + + +++ + G ++H G + +F V + + E D R
Sbjct: 555 GKIVIDGQAE----LDVQNVQMYGGYVLHTGFIKYGNFSVNDSVIA--EYDELRRWPIRN 608
Query: 648 AHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIA 706
HT +H+LN ALR VL QK V +++ DFS + +S + +E D I
Sbjct: 609 NHTGTHILNFALREVLGDGVDQKGSLVAAEKLRFDFS-HKSAISDSDLEKIEAKSTDYIR 667
Query: 707 NQVQVDRRHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISD-KENVISRE 754
V + + + +T + + GE YPD D IL ++ D + +S E
Sbjct: 668 QNCAVYSQEVPLATAREITGVRAVFGETYPDPVRVVSVGVELDEILKNVKDPRWEGVSIE 727
Query: 755 PCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHLS 804
C GTHV TG I+ ++ G+R I +TG+ + + A E G+ L+
Sbjct: 728 FCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQRIAREFGERLN 781
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 45 VPLSDPTLLFANAGMNQYKSIFLGTVDPNSDFAQLKRAHNSQKCIRAGGKHNDLDDVGKD 104
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + + E LTK L DRLY T+
Sbjct: 105 SYHHTFFEMLGNWSFGDYFKKEAIQFSWELLTK-VYGLDPDRLYVTY 150
>gi|395832444|ref|XP_003789281.1| PREDICTED: alanine--tRNA ligase, mitochondrial [Otolemur garnettii]
Length = 985
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 270/832 (32%), Positives = 417/832 (50%), Gaps = 87/832 (10%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----AP 68
+ ++R +FL +F + GH LV S+ + P GD ++ FVN+GM QFK +FLG + P A
Sbjct: 39 ASAVRDAFLSFFRDRHGHRLVPSASVRPRGDPTLLFVNAGMNQFKPIFLGTVDPRSEMAG 98
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSF-NDYYKRDACRMALEFLTK 127
+ RVANSQKCVR GG+H+DL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+
Sbjct: 99 FRRVANSQKCVRAGGRHSDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ 158
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
+P +RL+ TYFGG + G+ D E+RDIWL LGVP + + G + NFWEMG TGP
Sbjct: 159 -VYGIPEERLWVTYFGGDPKTGMQPDLESRDIWLSLGVPANRVLSFGPQENFWEMGETGP 217
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG +EIHYD+ G L+E+WN+VF+ H R + ++ PL + ++DTG+
Sbjct: 218 CGPCTEIHYDLAG---------GVGAPQLVELWNLVFMQHNRETNGSLQPLPQQHVDTGM 268
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ERLV +LQ K STYDTDLF PLL I + A PY ++ D +YR+++D+
Sbjct: 269 GLERLVAVLQGKHSTYDTDLFSPLLHAIYQGCEAPPYLGRVGVADEARTDMAYRVVADHI 328
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++V +AD + P + LR ++R A+ S +V + G + L + E LGD Y
Sbjct: 329 RTLSVCIADGVSPGMSGAPLVLRRILRRAVRFSTEVLQAPPG-FLGSLVPVVVETLGDAY 387
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLV-KTQPELEQFNIMEEPGLVLGVKY 423
PE+Q + +I ++ E+ F A+++ + ++ +T +L ++ P V
Sbjct: 388 PELQKNSAQIAKLVSEDEEAF----LASLQRGRQIIDRTVRQLGPSDVF--PAEVAWSLS 441
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L+ L + E+ + D+ GL + L E + + + +
Sbjct: 442 LSGNLGLPLDLVELMLEEKGVQLDSAGLER-------------LAQEEAQHRAQQAEPIQ 488
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
N+ + + + P TDD KY+Y N Y F + ++ Q++
Sbjct: 489 DQGLRLNIHALGDLQRRGVPPTDDSPKYNYSLRPNGD-YEFHTCEAQVL------QLYTE 541
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
D A+ G +H GL+ D+TN YA GGQ D G YL Q++
Sbjct: 542 DGTAVASVGKG--------QH---CGLLLDRTNFYAEQGGQASDRG--YLVREGQQDVLF 588
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
+ G I+H V++ + G ++ VD RLGCM HT +HLL+ AL++ L
Sbjct: 589 PVTRAQVCGGFILH--EVIAPECLQVGDQVQLHVDKAWRLGCMEKHTATHLLSWALQQAL 646
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
T Q+ + + D + L+ + + AVE+ + +V+ V +M L
Sbjct: 647 GPGTEQRGSHLNPERLRFDVATQA-PLTSEQLRAVERTVQEVVGQDEAV---YMEEVALA 702
Query: 723 FLTHLTVIPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGH 766
+PG E+YPD V L S S E CCGTH+ TG
Sbjct: 703 LTAQ---VPGLRSLDEVYPDPVRVVSVGVPVAQALDPASQAALQTSVELCCGTHLLRTGA 759
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST-AASFSQILNVGN 817
+ + G + + G + +TG+ ++ A E G+ L+ + ++ L+ GN
Sbjct: 760 VRDLVITGERQLSKGTTRLLAVTGEQAQQARELGQSLAQEVEAAAERLSRGN 811
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 76/107 (71%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD ++ FVN+GM QFK +FLG + P A + RVANSQKC+R GG+H+DL GRD
Sbjct: 66 PRGDPTLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHSDLEDVGRDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P +RL+ T+
Sbjct: 126 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPEERLWVTY 171
>gi|425766352|gb|EKV04967.1| Alanyl-tRNA synthetase, putative [Penicillium digitatum Pd1]
gi|425767085|gb|EKV05667.1| Alanyl-tRNA synthetase, putative [Penicillium digitatum PHI26]
Length = 958
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 274/819 (33%), Positives = 415/819 (50%), Gaps = 84/819 (10%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPA----- 67
++ +R +FLDYF GHT V SSP+ P D ++ F N+GM QFK++FLG A
Sbjct: 9 TAQRVRDTFLDYF-KQNGHTFVPSSPVAPLSDPTLLFTNAGMNQFKSIFLGTVDASSDFG 67
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + LT+
Sbjct: 68 KMKRATNSQKCLRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAITYSWTLLTE 127
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
L DRLY TYF G++ GL D E +++W +GVP HI MK NFWEMG GP
Sbjct: 128 V-YGLDPDRLYVTYFEGNEAGGLEPDLEAKELWKSVGVPESHILPGNMKDNFWEMGDQGP 186
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SE+HYD G ++A VN D +++EIWN VFI + R + ++ L ++DTG+
Sbjct: 187 CGPCSEVHYDRIGGRNAAHL-VNEDDPNVLEIWNNVFIQYNREADSSLRSLPNKHVDTGM 245
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV+ILQ+K S YDTD+F P+ + I+ +GA+ Y F + +DT+YR+++D+
Sbjct: 246 GFERLVSILQDKPSNYDTDVFTPIFQAIQNTTGAREYRGHFGADDSDGIDTAYRVVADHV 305
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R + A++D + P+ + +R V+R + F+V+ G +L + + LG+++
Sbjct: 306 RTLMFAISDGVIPNNEGRGYVIRRVLRRGARYARKYFQVEIGNFFAKLVPTVVDQLGEMF 365
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ + IL EE F K L + + + EQ+
Sbjct: 366 PELKRKQQDVIEILDEEELSFA----------KTLDRGERQFEQY--------------- 400
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
Q A+ + G + LYDT+G ++ + +A + L + FE+ + KE SK
Sbjct: 401 -AQQAKIKDTDMLHGADVWRLYDTFGFPVDLTRIMAEERGLRIDDVEFEEARLKAKEASK 459
Query: 485 A--KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
KAA N +D+ DL +D K D +S ++ + +++ I G + F
Sbjct: 460 GQKKAAENTVKLDVHDLGKLEKMNDVQKTD-----DSPKFGRGNITSHVKAIYHG-KTF- 512
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
H + D QL G+I D TN YA GGQ +D G + +
Sbjct: 513 -------HNSTDDVPDGAQL------GVILDCTNFYAEQGGQENDTGKIIIDGQAE---- 555
Query: 603 VEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+E+G++ S G ++H G + SF V G + E D R HT +H+LN AL+
Sbjct: 556 LEVGDVQSYAGYVLHTGFMKYGSFAV--GDSVICEYDELRRWPIRNNHTGTHILNFALKE 613
Query: 662 VL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
+L QK V +++ DFS + +S + +E D I V + + +
Sbjct: 614 ILGDGVDQKGSLVSAEKLRFDFS-HKSAISDAELEKIETKATDYIRQNCAVYSQELPLAT 672
Query: 721 LPFLTHLTVIPGEIYPDDV-----------ILIDISD-KENVISREPCCGTHVFNTGHIE 768
++ + + GE YPD V IL ++ D + +S E C GTHV TG I+
Sbjct: 673 AQQISGVRAVFGETYPDPVRVVSVGVELEEILQNVKDPRWQEVSIEFCGGTHVQKTGDIK 732
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHL 803
++ G+R I +TG+ + +AA E G L
Sbjct: 733 DLVILEENGIAKGIRRIIAVTGEEAHEVQRAAEEFGHRL 771
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 69/106 (65%), Gaps = 6/106 (5%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTPA-----PYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P D ++ F N+GM QFK++FLG A R NSQKC+R GGKHNDL G+DS
Sbjct: 36 PLSDPTLLFTNAGMNQFKSIFLGTVDASSDFGKMKRATNSQKCLRAGGKHNDLDDVGKDS 95
Query: 874 YHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++A + LT+ L DRLY T+
Sbjct: 96 YHHTFFEMLGNWSFGDYFKKEAITYSWTLLTE-VYGLDPDRLYVTY 140
>gi|340914733|gb|EGS18074.1| cytoplasmic alanyl-tRNA synthetase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1105
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 275/846 (32%), Positives = 421/846 (49%), Gaps = 78/846 (9%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLT 65
I + V+ +R +FLD+F +GHT+V SS +VP+ D ++ F N+GM QFK VFLG
Sbjct: 146 IMTEVKWTGPLVRKTFLDFFAE-RGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPVFLGTI 204
Query: 66 PAPYP-----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
P R A++QKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 205 GKSEPFAQLKRAADTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEW 264
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ E LTK L RLY TYF G+ + GL D E + +WL++GVP DHI MK NFW
Sbjct: 265 SWELLTKV-YGLDPSRLYVTYFEGNPELGLEPDLEAKQLWLDVGVPEDHILPGNMKDNFW 323
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A VN D ++EIWN VF+ R ++ PL
Sbjct: 324 EMGDQGPCGPCSEIHYDKVGGRNAAHL-VNKDDPLVVEIWNNVFMQFDRQKDKSLKPLPA 382
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV+ LQ+KTS Y TD+F PL + I++V+GA+PY + + +DT+Y
Sbjct: 383 RHIDTGMGFERLVSALQDKTSNYATDIFTPLFDRIQEVTGARPYADKYGKDDADGIDTAY 442
Query: 301 RMLSDYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+++D+ RM+ A+AD P+ +R V+R + + FK + G + +
Sbjct: 443 RVVADHIRMLAFAIADGAVPNNIGRGYVVRRVLRRGVRYARKYFKAEIGSFFSSILPALV 502
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
E +G+ +PE++ N I+ IL EE F AV L + + + E++
Sbjct: 503 EQMGEQFPELKKKQNDIKEILDEEEVAF------AVT----LDRGEKQFEKY-------- 544
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
LA ++SG + LYDT+G +++ + +A + LT+ E
Sbjct: 545 --------ASLAVKDGSNKLSGADVWRLYDTFGFPEDLTKLMAEERGLTIDEAEVEVARE 596
Query: 478 ELKERSKA--KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ +E SKA +A P +++ + + D +S +Y + + I
Sbjct: 597 KAREASKAVKEAVQTFPKLNVHQIAELENDIGLPRPD-----SSAKYVKGDIKAKVQLIF 651
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
G++ K +L +GL+ DKTN YA +GGQ+ D G +
Sbjct: 652 TGNEFRKTSK---------------ELPPKTPLGLLLDKTNFYAESGGQVADTGRIIIDG 696
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+ ++ ++ G IVH G + ++T G E D R HT +H+L
Sbjct: 697 VAE----FKVLDVQEYGGYIVHNG-YLEYGELTAGDEVICEYDELRRQPIRNNHTGTHIL 751
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
N ALR VL +QK V D+ DFS + +++D + +E+ N+ I ++ +
Sbjct: 752 NHALREVLGDEVHQKGSLVDQDKLRFDFS-HKSAVTLDQIKVIEEMCNEDIRKNLKTYAK 810
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVF 762
+ + + + GE YP+ V ++ I + + + P C GTHV
Sbjct: 811 DVDLDLARQIEGVRAVFGETYPNPVRVVSIGMDVDELLKNPKNPEWRKYSIEFCGGTHVD 870
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIPYGD 822
NTG I+ ++ G+R I TGD + A + K + + L G + +
Sbjct: 871 NTGLIKDFIIVEESGIAKGIRRIVACTGDGAHQAQRDAKTFAEKLDHIEALEFGPVKQAE 930
Query: 823 DSIAFV 828
A V
Sbjct: 931 IKAAAV 936
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK VFLG P R A++QKCIR GGKHNDL G+D
Sbjct: 179 VPHNDPTLLFTNAGMNQFKPVFLGTIGKSEPFAQLKRAADTQKCIRAGGKHNDLDDVGKD 238
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK L RLY T+
Sbjct: 239 SYHHTFFEMLGNWSFGDYFKKEAIEWSWELLTK-VYGLDPSRLYVTY 284
>gi|320040301|gb|EFW22234.1| alanyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
Length = 964
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 273/821 (33%), Positives = 414/821 (50%), Gaps = 92/821 (11%)
Query: 2 NNPNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVF 61
+NP+ + V + +R +FLD+F GHT V SS +VP D ++ F N+GM Q+K++F
Sbjct: 6 SNPS-QNEVEWPAIKVRDTFLDFF-KKNGHTFVPSSSVVPLSDPTLLFANAGMNQYKSIF 63
Query: 62 LGLTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRD 116
LG A R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++
Sbjct: 64 LGTVDPNSDFAQLKRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKE 123
Query: 117 ACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMK 176
A + E LTK L DRLY TYF G+ G+ D ET+D+WL +GV DHI MK
Sbjct: 124 AIEYSWELLTKV-YGLEPDRLYVTYFEGNKDAGIEPDLETKDLWLSVGVKEDHILSGNMK 182
Query: 177 CNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIV 236
NFWEMG GPCG SE+HYD G ++A VN D +++EIWN VFI + R S +
Sbjct: 183 DNFWEMGDQGPCGPCSEVHYDRIGGRNAAHL-VNMDDPNVLEIWNNVFIQYNRESESILR 241
Query: 237 PLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL 296
PL ++DTG+G+ERLV++LQ K S YDTD+F PL + I +++G +PY F + +
Sbjct: 242 PLPNKHVDTGMGYERLVSVLQKKYSNYDTDVFTPLFDAIREITGVRPYSGKFGEEDLDGI 301
Query: 297 DTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELS 353
DT+YR+++D+ R +T A++D P+ + +R V+R + KV+ G ++
Sbjct: 302 DTAYRVVADHVRTLTFAISDGAPPNNEGRGYVVRRVLRRGARYARKYLKVEIGNFFSKIV 361
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+ + +G ++PEI+ + IL EE F K L + + + E
Sbjct: 362 PTLVDQMGGMFPEIKKKQTDVMEILDEEEISFA----------KTLDRGERQFE------ 405
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
+ Q A+D ++ G + LYDT+G ++ Q +A + L++ + FE
Sbjct: 406 ----------IYAQQAKDSGSNKLHGADVWRLYDTFGFPVDLTQLMAEERGLSIDNVEFE 455
Query: 474 QKLNELKERSK--AKAASNVPDIDLMDLKHF-----PVTDDKYKYDYHYDTNSKRYTFPC 526
+ + KE SK AKAAS++ + + DL P T+D K+
Sbjct: 456 EARLKAKEASKGQAKAASDLLKLSVHDLSKLEKDKVPKTNDDAKFGR------------- 502
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQ-LEHNAWVGLIFDKTNLYATAGGQI 585
N++ ++ A+ H + +DS + +G+I DKTN YA GGQ
Sbjct: 503 --GNILSQIV----------AVYHDKE--FVDSTSGIPEGDQIGIILDKTNFYAEQGGQE 548
Query: 586 DDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
D G + + +++ + G + H G + ++ G + E D R
Sbjct: 549 YDTGKIIIDGKAE----LDVRNVQMYGGYVFHTG-FIKYGNLSVGDSVISEYDELRRWPI 603
Query: 646 MRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
HT +H+LN ALR VL QK V +++ DFS + +S + +E+ +
Sbjct: 604 RNNHTGTHILNFALREVLGNGIDQKGSLVAAEKLRFDFS-HKSGVSDSDLEKIEEKCTEY 662
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDV-----------ILIDISD-KENVIS 752
I V + + S +T + + GE YPD V IL D+ D + +S
Sbjct: 663 IRQNCAVYSKDVPLSVAREITGVRAVFGETYPDPVRVVSVGVELEEILKDVKDPRWKGVS 722
Query: 753 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
E C GTHV TG I+ ++ G+R I +TG+ +
Sbjct: 723 IEFCGGTHVQKTGDIKDLVILEEGGIAKGIRRIIAVTGEDA 763
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 42 VPLSDPTLLFANAGMNQYKSIFLGTVDPNSDFAQLKRAHNSQKCIRAGGKHNDLDDVGKD 101
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK L DRLY T+
Sbjct: 102 SYHHTFFEMLGNWSFGDYFKKEAIEYSWELLTK-VYGLEPDRLYVTY 147
>gi|119195813|ref|XP_001248510.1| alanyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
gi|392862286|gb|EAS37081.2| alanyl-tRNA synthetase [Coccidioides immitis RS]
Length = 1023
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 271/806 (33%), Positives = 407/806 (50%), Gaps = 91/806 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R +FLD+F GHT V SS +VP D ++ F N+GM Q+K++FLG A R
Sbjct: 79 VRDTFLDFF-KKNGHTFVPSSSVVPLSDPTLLFANAGMNQYKSIFLGTVDPNSDFAQLKR 137
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + E LTK
Sbjct: 138 AHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEYSWELLTKV-YG 196
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYF G+ G+ D ET+D+WL +GV DHI MK NFWEMG GPCG
Sbjct: 197 LEPDRLYVTYFEGNKDAGIEPDLETKDLWLSVGVKEDHILSGNMKDNFWEMGDQGPCGPC 256
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SE+HYD G ++A VN D +++EIWN VFI + R S + PL ++DTG+G+ER
Sbjct: 257 SEVHYDRIGGRNAAHL-VNMDDPNVLEIWNNVFIQYNRESESILRPLPNKHVDTGMGYER 315
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV++LQ K S YDTD+F PL + I +++G +PY F + +DT+YR+++D+ R +T
Sbjct: 316 LVSVLQKKYSNYDTDVFTPLFDAIREITGVRPYSGKFGEEDVDGIDTAYRVVADHVRTLT 375
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A++D P+ + +R V+R + KV+ G ++ + + +G ++PEI+
Sbjct: 376 FAISDGAPPNNEGRGYVVRRVLRRGARYARKYLKVEIGNFFSKIVPTLVDQMGGMFPEIK 435
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+ IL EE F K L + + + E + Q
Sbjct: 436 KKQTDVMEILDEEEISFA----------KTLDRGERQFE----------------IYAQQ 469
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK--AK 486
A+D ++ G + LYDT+G ++ Q +A + L++ + FE+ + KE SK AK
Sbjct: 470 AKDSGSNKLHGADVWRLYDTFGFPVDLTQLMAEERGLSIDNVEFEEARLKAKEASKGQAK 529
Query: 487 AASNVPDIDLMDLKHF-----PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
AAS++ + + DL P T+D K+ N++ ++
Sbjct: 530 AASDLLKLSVHDLSKLEKDKVPKTNDDAKFGR---------------GNILSQIV----- 569
Query: 542 CIDKHAIRHARSGASIDSIQ-LEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
AI H + +DS + +G+I DKTN YA GGQ D G + +
Sbjct: 570 -----AIYHDKE--FVDSTSGIPEGDQIGIILDKTNFYAEQGGQEYDTGKIIIDGKAE-- 620
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
+++ + G + H G + ++ G + E D R HT +H+LN ALR
Sbjct: 621 --LDVRNVQMYGGYVFHTG-FIKYGDLSVGDSVISEYDELRRWPIRNNHTGTHILNFALR 677
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
VL QK V +++ DFS + +S + +E+ + I V + + S
Sbjct: 678 EVLGNGIDQKGSLVAAEKLRFDFS-HKSGVSDSDLEKIEEKCTEYIRQNCAVYSKDVPLS 736
Query: 720 ELPFLTHLTVIPGEIYPDDV-----------ILIDISD-KENVISREPCCGTHVFNTGHI 767
+T + + GE YPD V IL D+ D + +S E C GTHV TG I
Sbjct: 737 VAREITGVRAVFGETYPDPVRVVSVGVELEEILKDVKDPRWKGVSIEFCGGTHVQKTGDI 796
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSS 793
+ ++ G+R I +TG+ +
Sbjct: 797 KDLVILEEGGIAKGIRRIIAVTGEDA 822
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 101 VPLSDPTLLFANAGMNQYKSIFLGTVDPNSDFAQLKRAHNSQKCIRAGGKHNDLDDVGKD 160
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK L DRLY T+
Sbjct: 161 SYHHTFFEMLGNWSFGDYFKKEAIEYSWELLTK-VYGLEPDRLYVTY 206
>gi|224014532|ref|XP_002296928.1| alanine-trna ligase [Thalassiosira pseudonana CCMP1335]
gi|220968308|gb|EED86656.1| alanine-trna ligase [Thalassiosira pseudonana CCMP1335]
Length = 933
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 270/797 (33%), Positives = 402/797 (50%), Gaps = 91/797 (11%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
+ IRS+F+ YF + HT + SSP P D ++ F N+GM QFK +FLG P A
Sbjct: 4 TSKIRSTFISYFQSKHSHTFIPSSPSAPLNDPTLLFTNAGMNQFKPIFLGRAPPGTELAT 63
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R NSQKC+R GGKHNDL G+D+YHHTFFEMLG+WSF DY+K++A A + LT+
Sbjct: 64 LTRAVNSQKCIRAGGKHNDLEDVGKDTYHHTFFEMLGSWSFGDYFKKEAIDYAWDLLTE- 122
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
+ +RLY TYF G + GL D E +D WL +P + + K NFWEMG TGPC
Sbjct: 123 VYGIEEERLYATYFQGDEALGLEEDTEAKDFWLRY-LPEERVLGCSAKDNFWEMGDTGPC 181
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G SEIHYD G A A VN D D+IEIWN+VFI R + + PL ++DTG+G
Sbjct: 182 GPCSEIHYDRIGN-RDASALVNEDDPDVIEIWNLVFIQFNR-DENGLNPLPAKHVDTGMG 239
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
ERL ++LQNK+S YD D F P+ + IEKV+ PY ++T DT+YR ++D++R
Sbjct: 240 LERLCSLLQNKSSNYDIDAFTPIFDAIEKVANVGPYEGKLGEEDKTLKDTAYRAVADHAR 299
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
+T ALAD PD + LR ++R A + + K + G L + EI G+ YP
Sbjct: 300 TLTFALADGAVPDNEGRGYVLRRILRRATRYGQQILKCEPG-FFSTLVPVVVEIFGEHYP 358
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E+ + + Q E E F+ M L G+KY
Sbjct: 359 EL------------------------IANQANIIEIVQEEEEAFSTM----LDRGIKYFE 390
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK- 484
++++ D + GD AF LYDT G ++ + +A +T+ + FE+++ K+RS+
Sbjct: 391 EEISDDKKKL-VPGDKAFFLYDTLGFPIDLTELMATEAGMTVDMKGFEEEMEGQKQRSRE 449
Query: 485 AKAASNVPDIDLMDL----------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
A+ A+ ++L + TDD KYD+ +D ++ +
Sbjct: 450 ARLAAKGLGGQRLELIAEQTAWLADEGIADTDDSSKYDWD----------KVVDASIKAV 499
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
D F + + + VGL+ DKT+ YA AGGQ D+G
Sbjct: 500 FTSDG-FLGEGDVAKEGDT--------------VGLVLDKTSFYAEAGGQDTDLGTISF- 543
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
E G++ + ++ + G I+H G V+S V+ G+ + +VD R H+ +H+
Sbjct: 544 ----EGGELFVNDVQAYGGYILHSG-VISKGSVSVGIAVKCQVDYARRRDVAPNHSMTHV 598
Query: 655 LNAALRRVL--TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
LNAALR VL C Q+ + ++ DFS + +S + + E Y+ D I + V
Sbjct: 599 LNAALREVLGEGCD-QRGSQCNDEKLRFDFS-HKSAMSTEQLRDTEIYVRDTIEKNLPVT 656
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
M ++ + + + GE+YPD V ++ + D +V E C GTH+ NT E+ +
Sbjct: 657 ADVMSLADAKAIPGVRAMFGEVYPDPVRVVRVGDDCSV---EFCGGTHISNTAEAEAFVL 713
Query: 773 IGYKSYNHGVRSIKCLT 789
+ G+R I LT
Sbjct: 714 TEETAVAKGIRRITALT 730
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 70/106 (66%), Gaps = 6/106 (5%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P D ++ F N+GM QFK +FLG P A R NSQKCIR GGKHNDL G+D+
Sbjct: 31 PLNDPTLLFTNAGMNQFKPIFLGRAPPGTELATLTRAVNSQKCIRAGGKHNDLEDVGKDT 90
Query: 874 YHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K++A A + LT+ + +RLY T+
Sbjct: 91 YHHTFFEMLGSWSFGDYFKKEAIDYAWDLLTE-VYGIEEERLYATY 135
>gi|303321650|ref|XP_003070819.1| Alanyl-tRNA synthetase, cytoplasmic , putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240110516|gb|EER28674.1| Alanyl-tRNA synthetase, cytoplasmic , putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 1023
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 273/821 (33%), Positives = 414/821 (50%), Gaps = 92/821 (11%)
Query: 2 NNPNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVF 61
+NP+ + V + +R +FLD+F GHT V SS +VP D ++ F N+GM Q+K++F
Sbjct: 65 SNPS-QNEVEWPAIKVRDTFLDFF-KKNGHTFVPSSSVVPLSDPTLLFANAGMNQYKSIF 122
Query: 62 LGLTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRD 116
LG A R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++
Sbjct: 123 LGTVDPNSDFAQLKRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKE 182
Query: 117 ACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMK 176
A + E LTK L DRLY TYF G+ G+ D ET+D+WL +GV DHI MK
Sbjct: 183 AIEYSWELLTKV-YGLEPDRLYVTYFEGNKDAGIEPDLETKDLWLSVGVKEDHILSGNMK 241
Query: 177 CNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIV 236
NFWEMG GPCG SE+HYD G ++A VN D +++EIWN VFI + R S +
Sbjct: 242 DNFWEMGDQGPCGPCSEVHYDRIGGRNAAHL-VNMDDPNVLEIWNNVFIQYNRESESILR 300
Query: 237 PLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL 296
PL ++DTG+G+ERLV++LQ K S YDTD+F PL + I +++G +PY F + +
Sbjct: 301 PLPNKHVDTGMGYERLVSVLQKKYSNYDTDVFTPLFDAIREITGVRPYSGKFGEEDLDGI 360
Query: 297 DTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELS 353
DT+YR+++D+ R +T A++D P+ + +R V+R + KV+ G ++
Sbjct: 361 DTAYRVVADHVRTLTFAISDGAPPNNEGRGYVVRRVLRRGARYARKYLKVEIGNFFSKIV 420
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+ + +G ++PEI+ + IL EE F K L + + + E
Sbjct: 421 PTLVDQMGGMFPEIKKKQTDVMEILDEEEISFA----------KTLDRGERQFE------ 464
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
+ Q A+D ++ G + LYDT+G ++ Q +A + L++ + FE
Sbjct: 465 ----------IYAQQAKDSGSNKLHGADVWRLYDTFGFPVDLTQLMAEERGLSIDNVEFE 514
Query: 474 QKLNELKERSK--AKAASNVPDIDLMDLKHF-----PVTDDKYKYDYHYDTNSKRYTFPC 526
+ + KE SK AKAAS++ + + DL P T+D K+
Sbjct: 515 EARLKAKEASKGQAKAASDLLKLSVHDLSKLEKDKVPKTNDDAKFGR------------- 561
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQ-LEHNAWVGLIFDKTNLYATAGGQI 585
N++ ++ A+ H + +DS + +G+I DKTN YA GGQ
Sbjct: 562 --GNILSQIV----------AVYHDKE--FVDSTSGIPEGDQIGIILDKTNFYAEQGGQE 607
Query: 586 DDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
D G + + +++ + G + H G + ++ G + E D R
Sbjct: 608 YDTGKIIIDGKAE----LDVRNVQMYGGYVFHTG-FIKYGNLSVGDSVISEYDELRRWPI 662
Query: 646 MRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
HT +H+LN ALR VL QK V +++ DFS + +S + +E+ +
Sbjct: 663 RNNHTGTHILNFALREVLGNGIDQKGSLVAAEKLRFDFS-HKSGVSDSDLEKIEEKCTEY 721
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDV-----------ILIDISD-KENVIS 752
I V + + S +T + + GE YPD V IL D+ D + +S
Sbjct: 722 IRQNCAVYSKDVPLSVAREITGVRAVFGETYPDPVRVVSVGVELEEILKDVKDPRWKGVS 781
Query: 753 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
E C GTHV TG I+ ++ G+R I +TG+ +
Sbjct: 782 IEFCGGTHVQKTGDIKDLVILEEGGIAKGIRRIIAVTGEDA 822
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 101 VPLSDPTLLFANAGMNQYKSIFLGTVDPNSDFAQLKRAHNSQKCIRAGGKHNDLDDVGKD 160
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK L DRLY T+
Sbjct: 161 SYHHTFFEMLGNWSFGDYFKKEAIEYSWELLTK-VYGLEPDRLYVTY 206
>gi|392573898|gb|EIW67036.1| hypothetical protein TREMEDRAFT_34057 [Tremella mesenterica DSM
1558]
Length = 977
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 297/886 (33%), Positives = 429/886 (48%), Gaps = 100/886 (11%)
Query: 14 SKSIRSSFLDYFCNTQG--HTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
+ +R +F+DYF G HT SS ++P+ DD++ F N+GM QFK +FLG T P
Sbjct: 25 ASKVRQTFIDYFAQQPGFEHTFWPSSGVIPFEDDTLLFANAGMNQFKPLFLG-TADPKSE 83
Query: 71 -----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
R NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K A MA + L
Sbjct: 84 LSKLHRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKIGALTMAWDLL 143
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW-EMGS 184
T+ LP DRLY TYF G ++ GL D E ++IW +LGVP HI K NFW EMG+
Sbjct: 144 TRV-YGLPKDRLYVTYFEGDEKQGLEPDNEAKEIWKQLGVPETHILTGNAKDNFWVEMGA 202
Query: 185 TGPCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYI 243
TGPCG SEIH+D + G +S L VNAD +++EIWN VFI + R S+ + L ++
Sbjct: 203 TGPCGPCSEIHFDRIGGRDASHL--VNADDPNVLEIWNNVFIQYNRESSGALRSLPAKHV 260
Query: 244 DTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRML 303
DTG+GFERLV++L N +S YDTD+F P+ I++++GA+PY ++ +DT+YR++
Sbjct: 261 DTGMGFERLVSVLHNVSSNYDTDVFTPIFAKIQELTGARPYTGKLGDEDKDGVDTAYRVI 320
Query: 304 SDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL 360
+D+ R +T+A++D PD + LR ++R + + + VK G L + + L
Sbjct: 321 ADHIRTLTIAISDGGVPDKDGRGYVLRRILRRGVRYASNKMNVKIGSFFSSLVPTVVDSL 380
Query: 361 GDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
++PE+ I ++ E F G L
Sbjct: 381 SGIFPEVTKRIPELI------------------------EILNEEEASFARTLNRGETLF 416
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
KY +A T +SG + LYDTYG ++ Q +A + L + AFE+ E
Sbjct: 417 SKYAA--IAAQEKRTVLSGKDIWRLYDTYGFPVDLTQIMAEERGLKIDQVAFEKARLESL 474
Query: 481 ERSKA--KAASNVP-DIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
E SKA KAA V +D+ DL D K D +S +Y ++ + GI
Sbjct: 475 EASKAGGKAAGGVQIKLDVHDLAALEENADVPKTD-----DSAKYQLDDIEATVKGI--- 526
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
+ +S + +L N G++ +KTN YA +GGQ +D GV +
Sbjct: 527 ------------YYQSKFHQSTSELPPNVPFGILLNKTNFYAESGGQENDTGVLAI---- 570
Query: 598 QENGKVE--IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+GK E + ++ G ++H G + ++ G D R HT +H+L
Sbjct: 571 --DGKAEFKVEDVQVYNGYVLHVGQMEEG-EIKLGDEVICTYDELRRWPIRNNHTGTHIL 627
Query: 656 NAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
N ALR VL QK V + DFS + + +SVD +A +E N+ I V V +
Sbjct: 628 NFALREVLGDHIDQKGSLVAPSKLRFDFS-HNKAISVDEIAKIEAISNEWIKKAVPVYAK 686
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDIS------------DKENVISREPCCGTHVF 762
M + L + GE YPD V ++ I K S E C GTHV
Sbjct: 687 EMSLQAAYKIPGLRAVFGEAYPDPVRVVSIGYPLEEISQNIEDTKWRSTSIEFCGGTHVA 746
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTG----DSSKAAVENGKHLSTAASFSQILNVGNI 818
T I+ +I S G+R I +TG D S+ +E + L S ++
Sbjct: 747 KTDDIKDFVIIEESSIAKGIRRIVAVTGHDANDVSRRGLEFERRLERIESMQGKEKETSM 806
Query: 819 -PY----GDDSIAFVNSGMCQ--FKNVFLGLTPAPYPRVANSQKCI 857
PY G I+ V Q F + L R+A QK +
Sbjct: 807 KPYLAELGQSGISLVKRHSLQRRFDKLSSDLAAITKTRLAAEQKQV 852
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 74/110 (67%), Gaps = 8/110 (7%)
Query: 816 GNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP------RVANSQKCIRVGGKHNDLSFA 869
G IP+ DD++ F N+GM QFK +FLG T P R NSQKCIR GGKHNDL
Sbjct: 51 GVIPFEDDTLLFANAGMNQFKPLFLG-TADPKSELSKLHRAVNSQKCIRAGGKHNDLDDV 109
Query: 870 GRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
G+D+YHHTFFEMLGNWSF DY+K A MA + LT+ LP DRLY T+
Sbjct: 110 GKDTYHHTFFEMLGNWSFGDYFKIGALTMAWDLLTR-VYGLPKDRLYVTY 158
>gi|291229512|ref|XP_002734712.1| PREDICTED: alanyl-tRNA synthetase-like [Saccoglossus kowalevskii]
Length = 974
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 277/829 (33%), Positives = 414/829 (49%), Gaps = 90/829 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQG--HTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP--- 66
L K IR F+D+F N +G H V S+ +VP D ++ F N+GM QFK +F G+
Sbjct: 3 LTGKGIRQGFIDFFRNKKGLEHEFVPSNSVVPLDDPTLLFTNAGMNQFKPIFQGVVDPNS 62
Query: 67 --APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEF 124
A + RVANSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C MA E
Sbjct: 63 DMAKWVRVANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEVCEMAWEL 122
Query: 125 LTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGS 184
LT LP +RLY TYFGG ++ GL DEE + IW+++G+P + + M+ NFWEMG
Sbjct: 123 LTD-VWKLPKERLYVTYFGGDEKMGLGPDEECKQIWIDIGLPPERVLPFSMRDNFWEMGD 181
Query: 185 TGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
GPCG SEIH+D G A VN D +++E+WN+VF+ R +I PL K ID
Sbjct: 182 VGPCGPCSEIHFDRIG-GRDATHLVNMDDPNVLELWNLVFMQFNREPDGSIRPLPKKNID 240
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
G+G ER++++LQ K S YDTD+F P + I K +G + Y + + +D +YR+++
Sbjct: 241 CGMGLERVISVLQGKMSNYDTDIFTPFFDAIHKGTGVREYQGKVGSEDTDGIDMAYRVVA 300
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D+ R +T+A++D PD + LR V+R + + + G L + + LG
Sbjct: 301 DHIRTLTIAISDGGRPDNVGRGYVLRRVLRRGVRYATEKLNAPSG-FFASLVQVVLDTLG 359
Query: 362 DVYPEI-QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
D +P I +D I +I EE++ L + + L +T +LE
Sbjct: 360 DAFPGIKKDPQLVIDIINEEEAQFLKTLNRGH----RVLQRTINKLE------------- 402
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTL----CHEAFEQKL 476
TK L G A+ LYDTYG ++ Q +A L + E ++KL
Sbjct: 403 ----TKVLP---------GKAAWLLYDTYGFPVDLTQLMAEENGLNIDMGEYEEEKKKKL 449
Query: 477 NELKERSKAKAASNVPDID------LMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
L + K + +D L D + TDD KY Y YD + +Y F
Sbjct: 450 RFLLSQGKGSGVDDTIGLDVHAISELQDTRKVSATDDSPKYSYTYDEQNSKYVFNA---- 505
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
+V VI A+R + S ++++ G++ DKT YA GGQI D G
Sbjct: 506 IVATVI----------ALRKDKQFVS----EVDNGDECGMLLDKTCFYAEQGGQIWDEG- 550
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGN---VVSSFKVTPGLTSRVEVDARMRLGCMR 647
++ + + ++ + G I+H G V S K+ G ++ +D R M
Sbjct: 551 -FMEKENNPDIEFKVTNVQVKGGYILHIGKLSAVDSEGKLKVGDKMKLYIDEARRRPIMS 609
Query: 648 AHTTSHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
HT +H+LN ALR+VL QK V D+ DF+ G ++ + V + E+ N+++
Sbjct: 610 NHTGTHMLNYALRKVLGEADQKGSLVAPDKLRFDFTAKG-AMTTEQVQSAEQITNEMVQK 668
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPDDV----ILIDISDKE--------NVISREP 755
V ++ + + L + E+YPD V I I + D E S E
Sbjct: 669 SQPVYAKNSPLAVAKAIQGLRAVFDEVYPDPVRVISIGIPVEDMEADPSGPAGATTSIEF 728
Query: 756 CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
C GTH+ N+GHI ++ ++ G+R I +TGD ++ A+ L
Sbjct: 729 CGGTHLLNSGHIGPFVIVTEEAIAKGIRRIVAITGDDAQKAINRADMLE 777
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK +F G+ A + RVANSQKCIR GGKHNDL G+D
Sbjct: 33 VPLDDPTLLFTNAGMNQFKPIFQGVVDPNSDMAKWVRVANSQKCIRAGGKHNDLDDVGKD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C MA E LT LP +RLY T+
Sbjct: 93 VYHHTFFEMLGNWSFGDYFKKEVCEMAWELLTD-VWKLPKERLYVTY 138
>gi|405121271|gb|AFR96040.1| alanine-tRNA ligase [Cryptococcus neoformans var. grubii H99]
Length = 1012
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 291/826 (35%), Positives = 412/826 (49%), Gaps = 102/826 (12%)
Query: 17 IRSSFLDYFCNTQG--HTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP---- 70
+R +F+DYF N G HT SS ++P+ DD++ F N+GM Q+K +FLG T P
Sbjct: 65 VRQTFIDYFVNQPGFEHTFWPSSGVIPFDDDTLLFANAGMNQYKPLFLG-TADPKSELSK 123
Query: 71 --RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R ANSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K A MA + LT+
Sbjct: 124 LIRAANSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKVGALTMAWDLLTRV 183
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
LP DRLY TYF G + GL D E + IW +LGVP HI K NFWEMG+TGPC
Sbjct: 184 -YGLPKDRLYVTYFEGDAKQGLEPDSEAQQIWRDLGVPESHILPGNAKDNFWEMGATGPC 242
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G SEIH+D G +A VNAD +++EIWN VFI + R + + L ++DTG+G
Sbjct: 243 GPCSEIHFDRIGGREAA-HLVNADDPNVLEIWNNVFIQYNREPSGELRTLPAKHVDTGMG 301
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
FERLV++L N +S YDTD+F P+ I++++GA+PY ++ +DT+YR+++D+ R
Sbjct: 302 FERLVSVLHNVSSNYDTDVFTPIFSKIQELTGARPYEGKLGDEDKDGIDTAYRVIADHIR 361
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
+T+A++D PD + LR V+R + + + F VK G L + E LG ++P
Sbjct: 362 TLTIAISDGGIPDKDGRGYVLRRVLRRGVRYASNKFGVKIGTFFSSLVPTVVESLGSIFP 421
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E+ I ++ IL EE F G L KY T
Sbjct: 422 EVTKKIPELIEILNEEEASFARTLNR------------------------GEALFNKYAT 457
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ D T +SG + LYDTYG ++ Q +A + L + EAFE+ E E SKA
Sbjct: 458 TAI--DEKRTVLSGKDIWRLYDTYGFPVDLTQIMAEERGLKIDQEAFEKARLESLEASKA 515
Query: 486 ---KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ A + +D+ DL P TDD +KY H D + ++ I
Sbjct: 516 GGKEKAGALVKLDVHDLAALEANDAVPKTDDSFKY--HLDD---------IKASVKSIYH 564
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
G + + +L N G++ D+TN YA +GGQ D GV +
Sbjct: 565 GSKFLN---------------STSELPPNTTFGILLDRTNFYAESGGQEYDTGVIAI--- 606
Query: 597 TQENGKVE--IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+GK E + ++ G ++H G + + G D R HT +H+
Sbjct: 607 ---DGKAEFKVEDVQVYNGYVLHIGRMEEG-DIEIGDEVICTYDELRRWPIRNNHTGTHI 662
Query: 655 LNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN ALR VL QK V + DFS +G++++V + +E ND I V V
Sbjct: 663 LNFALREVLGDHIDQKGSLVAPTKLRFDFS-HGKSIAVPELIKIEGICNDWIKKGVPVYA 721
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDIS------------DKENVISREPCCGTHV 761
+ M +E + L + GE YPD V ++ + K S E C GTHV
Sbjct: 722 KDMPLAEAYKIPGLRAVFGEAYPDPVRVVSLGYPLEDIAKNVEDSKWRQTSIEFCGGTHV 781
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTG----DSSKAAVENGKHL 803
T I+ +I S G+R I +TG D S+ VE + L
Sbjct: 782 AKTDDIKDFVIIEESSIAKGIRRIVAVTGHDAHDVSRKGVEFERKL 827
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 75/110 (68%), Gaps = 8/110 (7%)
Query: 816 GNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP------RVANSQKCIRVGGKHNDLSFA 869
G IP+ DD++ F N+GM Q+K +FLG T P R ANSQKCIR GGKHNDL
Sbjct: 88 GVIPFDDDTLLFANAGMNQYKPLFLG-TADPKSELSKLIRAANSQKCIRAGGKHNDLDDV 146
Query: 870 GRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
G+D+YHHTFFEMLGNWSF DY+K A MA + LT+ LP DRLY T+
Sbjct: 147 GKDTYHHTFFEMLGNWSFGDYFKVGALTMAWDLLTR-VYGLPKDRLYVTY 195
>gi|453082882|gb|EMF10929.1| alanyl-tRNA synthetase [Mycosphaerella populorum SO2202]
Length = 1007
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 282/836 (33%), Positives = 413/836 (49%), Gaps = 89/836 (10%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R +F++YF GHT V S +VP D ++ F N+GM QFK +FLG A R
Sbjct: 65 VRKTFIEYF-EKNGHTFVPSGSVVPLSDPTLLFTNAGMNQFKAIFLGTVDRDSDFAKLKR 123
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
ANSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K +A +++ + LTK
Sbjct: 124 AANSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKEEAIQLSWQLLTKV-YG 182
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYF G GL D E RD WL GVP DHI MK NFWEMG GPCG
Sbjct: 183 LQPDRLYVTYFEGKADAGLDPDTEARDFWLAQGVPEDHILTGDMKDNFWEMGDQGPCGPC 242
Query: 192 SEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIHYD + G +S L VN D ++IEIWN VFI + R ++ L ++DTG+GFE
Sbjct: 243 SEIHYDRIGGRNASHL--VNQDDPNVIEIWNNVFIQYNREPDKSLKSLPNKHVDTGMGFE 300
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV+ILQNK S YDTD+F PL I++++GA+ Y F + +DT+YR+++D+ R++
Sbjct: 301 RLVSILQNKPSNYDTDVFTPLFARIQEITGAREYQGKFGEEDADGVDTAYRVVADHVRLL 360
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
T A++D P+ + +R V+R + F G +L + E +GD++PEI
Sbjct: 361 TFAISDGGVPNNVGRGYVVRRVLRRGARYARKYFNTDIGSFFSKLVPTLVEQMGDMFPEI 420
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ ++++ IL EE F K L + + E++ Q
Sbjct: 421 KKKQDEVKEILDEEEVSFA----------KTLDRGESMFEKY----------------AQ 454
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA-- 485
+ ++G + LYDTYG ++ + + + L + + + + +E SK
Sbjct: 455 NCKSSGTKTLAGADVWRLYDTYGFPVDLTRLMCDERGLEIIDKDVAEAQEKAREASKGEK 514
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
KA + + +D+ D+ D K D DT P + + I
Sbjct: 515 KAGATLVKLDVHDISTLENMPDVPKTD---DT-------PKFQRDNIKATI--------- 555
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
AI H R S ++ G+I DKTN YA GGQ +D G + + +++
Sbjct: 556 KAIYHDRKFIKSTS-EIPEGEQFGVILDKTNFYAEQGGQENDTGRILIDGEAE----IKV 610
Query: 606 GELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL- 663
+ G ++H G V S KV + S E D R HT +H+LN ALR VL
Sbjct: 611 DNVQQYAGYVMHTGYVEYGSLKVGDEVLS--EYDELRRQPIRNNHTGTHILNYALREVLG 668
Query: 664 TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPF 723
QK V ++ DFS + ++ + +A +E+ + I +V + + +
Sbjct: 669 DDVNQKGSLVAPEKLRFDFS-HKAGVTDEELAKIEEVSTNYIRQNFEVFSKDVPLATARQ 727
Query: 724 LTHLTVIPGEIYPDDVILIDI-----------SD-KENVISREPCCGTHVFNTGHIESCT 771
+ + + GE YPD V ++ + SD K N IS E C GTHV +T I+
Sbjct: 728 INGVRAVFGETYPDPVRVVSVGMAVEDLLENPSDPKWNDISIEFCGGTHVKSTTEIKDLV 787
Query: 772 VIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFS-QILNVGNIPYGDDSIA 826
V+ G+R I +TG E + + A + Q+ + +PYG D A
Sbjct: 788 VVEESGIAKGIRRIVAVTG------AEAHRVQAIAQEWEKQVSALEKLPYGPDKEA 837
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK +FLG A R ANSQKCIR GGKHNDL G+D
Sbjct: 87 VPLSDPTLLFTNAGMNQFKAIFLGTVDRDSDFAKLKRAANSQKCIRAGGKHNDLDDVGKD 146
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K +A +++ + LTK L DRLY T+
Sbjct: 147 SYHHTFFEMLGNWSFGDYFKEEAIQLSWQLLTK-VYGLQPDRLYVTY 192
>gi|74742244|sp|Q5JTZ9.1|SYAM_HUMAN RecName: Full=Alanine--tRNA ligase, mitochondrial; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS; Flags:
Precursor
gi|119624673|gb|EAX04268.1| alanyl-tRNA synthetase like [Homo sapiens]
Length = 985
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 275/811 (33%), Positives = 406/811 (50%), Gaps = 86/811 (10%)
Query: 21 FLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANS 75
FL++F + GH LV S+ + P GD S+ FVN+GM QFK +FLG A + RVANS
Sbjct: 46 FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105
Query: 76 QKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN-DYYKRDACRMALEFLTKPPVSLPL 134
QKCVR GG HNDL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P
Sbjct: 106 QKCVRAGGHHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQV-YGIPE 164
Query: 135 DRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEI 194
+RL+ +YF G + GL D ETRDIWL LGVP + G + NFWEMG TGPCG +EI
Sbjct: 165 ERLWISYFDGDPKAGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPCTEI 224
Query: 195 HYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVT 254
HYD+ G L+E+WN+VF+ H R + ++ PL + ++DTG+G ERLV
Sbjct: 225 HYDLAG---------GVGAPQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGLERLVA 275
Query: 255 ILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVAL 314
+LQ K STYDTDLF PLL I++ A PY ++ DT+YR+++D+ R ++V +
Sbjct: 276 VLQGKHSTYDTDLFSPLLNAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCI 335
Query: 315 ADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSI 371
+D +FP + LR ++R A+ S ++ K G + L + E LGD YPE+Q +
Sbjct: 336 SDGIFPGMSGPPLVLRRILRRAVRFSMEILKAPPG-FLGSLVPVVVETLGDAYPELQRNS 394
Query: 372 NKIQLILGEESRIFDNLRKAAVKEWKPLV-KTQPELEQFNIMEEPGLVLGVKYLTKQLAR 430
+I ++ E+ F A+++ + ++ +T L ++ P V L L
Sbjct: 395 AQIANLVSEDEAAF----LASLERGRRIIDRTLRTLGPSDMF--PAEVAWSLSLCGDLGL 448
Query: 431 DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASN 490
+ E+ + D+ GL + L E + + + + K +
Sbjct: 449 PLDMVELMLEEKGVQLDSAGLER-------------LAQEEAQHRARQAEPVQKQGLWLD 495
Query: 491 VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRH 550
V + + + P TDD KY+Y S Y F + ++ Q++ D A+
Sbjct: 496 VHALGELQRQGVPPTDDSPKYNYSLRP-SGSYEFGTCEAQVL------QLYTEDGTAV-- 546
Query: 551 ARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELAS 610
AS+ Q GL+ D+TN YA GGQ D G YL QE+ +
Sbjct: 547 ----ASVGKGQR-----CGLLLDRTNFYAEQGGQASDRG--YLVRAGQEDVLFPVARAQV 595
Query: 611 LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQK 669
G I+H ++ G ++ VD RLGCM HT +HLLN ALR+ L T Q+
Sbjct: 596 CGGFILHEAVAPECLRL--GDQVQLHVDEAWRLGCMAKHTATHLLNWALRQTLGPGTEQQ 653
Query: 670 SCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTV 729
+ ++ LD + L+ + + AVE + + + V +M E+P L
Sbjct: 654 GSHLNPEQLRLDVTTQ-TPLTPEQLRAVENTVQEAVGQDEAV---YM--EEVP-LALTAQ 706
Query: 730 IPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
+PG E+YPD V L S S E CCGTH+ TG + +I
Sbjct: 707 VPGLRSLDEVYPDPVRVVSVGVPVAHALDPASQAALQTSVELCCGTHLLRTGAVGDLVII 766
Query: 774 GYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
G + + G + +TG+ ++ A E G+ L+
Sbjct: 767 GDRQLSKGTTRLLAVTGEQAQQARELGQSLA 797
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RVANSQKC+R GG HNDL GRD
Sbjct: 66 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGHHNDLEDVGRDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P +RL+ ++
Sbjct: 126 SHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQ-VYGIPEERLWISY 171
>gi|397526721|ref|XP_003833266.1| PREDICTED: alanine--tRNA ligase, mitochondrial [Pan paniscus]
Length = 985
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 274/810 (33%), Positives = 401/810 (49%), Gaps = 84/810 (10%)
Query: 21 FLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANS 75
FL++F + GH LV S+ + P GD S+ FVN+GM QFK +FLG A + RVANS
Sbjct: 46 FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105
Query: 76 QKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN-DYYKRDACRMALEFLTKPPVSLPL 134
QKCVR GG HNDL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P
Sbjct: 106 QKCVRAGGHHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQV-YGIPE 164
Query: 135 DRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEI 194
+RL+ +YF G + GL D ETRDIWL LGVP + G + NFWEMG TGPCG +EI
Sbjct: 165 ERLWISYFDGDPKAGLDPDLETRDIWLSLGVPASRVLSFGPQDNFWEMGDTGPCGPCTEI 224
Query: 195 HYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVT 254
HYD+ G L+E+WN+VF+ H R + ++ PL + ++DTG+G ERLV
Sbjct: 225 HYDLAG---------GVGAPQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGLERLVA 275
Query: 255 ILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVAL 314
+LQ K STYDTDLF PLL I++ A PY ++ DT+YR+++D+ R ++V +
Sbjct: 276 VLQGKHSTYDTDLFSPLLNAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCI 335
Query: 315 ADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSI 371
+D +FP + LR ++R A+ S ++ K G + L + E LGD YPE+Q +
Sbjct: 336 SDGIFPGMSGPPLVLRRILRRAVRFSMEILKAPPG-FLGSLVPVVVETLGDAYPELQRNS 394
Query: 372 NKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARD 431
+I ++ E+ F + + ++T + F P V L L
Sbjct: 395 AQIANLVSEDEAAFLASLERGRRIIDRTLRTLGPSDMF-----PAEVAWSLSLCGDLGLP 449
Query: 432 PSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNV 491
+ E+ + D+ GL + L E + + + + K +V
Sbjct: 450 LDMVELMLEEKGVQLDSAGLER-------------LAQEEAQHRARQAEPVQKQGLWLDV 496
Query: 492 PDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHA 551
+ + + P TDD KY+Y S Y F + ++ Q++ D A+
Sbjct: 497 HALGELQRQGVPPTDDSPKYNYSLRP-SGSYEFGTCEAQVL------QLYTEDGTAV--- 546
Query: 552 RSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASL 611
AS+ Q GL+ D+TN YA GGQ D G YL QE+ +
Sbjct: 547 ---ASVGKGQR-----CGLLLDRTNFYAEQGGQASDRG--YLVRAGQEDVLFPVARAQVC 596
Query: 612 EGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKS 670
G I+H ++ G ++ VD RLGCM HT +HLLN ALR+ L T Q+
Sbjct: 597 GGFILHEAVAPECLRL--GDQVQLHVDEAWRLGCMAKHTATHLLNWALRQTLGPGTEQQG 654
Query: 671 CRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVI 730
+ ++ LD + L+ + + AVE + + + V +M E+P L +
Sbjct: 655 SHLNPEQLRLDVTTQ-TPLTPEQLRAVENTVQEAVGQDEAV---YM--EEVP-LALTAQV 707
Query: 731 PG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
PG E+YPD V L S S E CCGTH+ TG + +IG
Sbjct: 708 PGLRSLDEVYPDPVRVVSVGVPVAHALDPASQAALQTSVELCCGTHLLRTGAVGDLVIIG 767
Query: 775 YKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
+ + G + +TG+ ++ A E G+ L+
Sbjct: 768 DRQLSKGTTRLLAITGEQAQQARELGQSLA 797
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RVANSQKC+R GG HNDL GRD
Sbjct: 66 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGHHNDLEDVGRDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P +RL+ ++
Sbjct: 126 SHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQ-VYGIPEERLWISY 171
>gi|426353353|ref|XP_004044161.1| PREDICTED: alanine--tRNA ligase, mitochondrial [Gorilla gorilla
gorilla]
Length = 985
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 277/811 (34%), Positives = 408/811 (50%), Gaps = 86/811 (10%)
Query: 21 FLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANS 75
FL++F + GH LV S+ + P GD S+ FVN+GM QFK +FLG + P A + RVANS
Sbjct: 46 FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105
Query: 76 QKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN-DYYKRDACRMALEFLTKPPVSLPL 134
QKCVR GG HNDL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P
Sbjct: 106 QKCVRAGGHHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQV-YGIPE 164
Query: 135 DRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEI 194
+RL+ +YF G + GL D ETRDIWL LGVP + G + NFWEMG TGPCG +EI
Sbjct: 165 ERLWVSYFDGDPKAGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPCTEI 224
Query: 195 HYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVT 254
HYD+ G LIE+WN+VF+ H R + ++ PL + ++DTG+G ERLV
Sbjct: 225 HYDLAG---------GVGAPQLIELWNLVFMQHNRETDGSLQPLPQRHVDTGMGLERLVA 275
Query: 255 ILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVAL 314
+LQ K STYDTDLF PLL I++ A PY ++ DT+YR+++D+ R ++V +
Sbjct: 276 VLQGKHSTYDTDLFSPLLNAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCI 335
Query: 315 ADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSI 371
+D +FP + LR ++R A+ S ++ K G + L + E LGD YPE+Q +
Sbjct: 336 SDGVFPGMSGPPLVLRRILRRAVRFSMEILKAPPG-FLGSLVPIVVETLGDAYPELQRNS 394
Query: 372 NKIQLILGEESRIFDNLRKAAVKEWKPLV-KTQPELEQFNIMEEPGLVLGVKYLTKQLAR 430
+I ++ E+ F A+++ + ++ +T L ++ P V L L
Sbjct: 395 AQIANLVSEDEAAF----LASLERGRRIIDRTLRTLGPSDMF--PAEVAWSLSLCGDLGL 448
Query: 431 DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASN 490
+ E+ + D+ GL + L E + + + + K +
Sbjct: 449 PLDMVELMLEEKGVQLDSAGLER-------------LAQEEAQHRARQAEPVQKQGLWLD 495
Query: 491 VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRH 550
V + + + P TDD KY+Y S Y F + ++ Q++ D A+
Sbjct: 496 VHALGELQRQGVPPTDDSPKYNYSLRP-SGSYEFGTCEAQVL------QLYTEDGTAV-- 546
Query: 551 ARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELAS 610
AS+ Q GL+ D+TN YA GGQ D G YL QE+ +
Sbjct: 547 ----ASVGKGQR-----CGLLLDRTNFYAEQGGQASDRG--YLVRAGQEDVLFPVARAQV 595
Query: 611 LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQK 669
G I+H ++ G ++ VD RLGCM HT +HLLN ALR+ L T Q+
Sbjct: 596 CGGFILHEAVAPECLQI--GDQVQLHVDETWRLGCMAKHTATHLLNWALRQTLGPGTEQQ 653
Query: 670 SCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTV 729
+ ++ LD + L+ + + AVE + + + V +M E+P L
Sbjct: 654 GSHLNPEQLRLDVTTQ-TPLTPEQLRAVENTVQEAVGQDEAV---YM--EEVP-LALTAQ 706
Query: 730 IPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
+PG E+YPD V L S S E CCGTH+ TG + +I
Sbjct: 707 VPGLRSLDEVYPDPVRVVSVGVPVAHALDPASQAALQTSVELCCGTHLLRTGAVGDLVII 766
Query: 774 GYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
G + + G + +TG+ ++ A E G+ L+
Sbjct: 767 GDRQLSKGTTRLLAVTGEQAQQARELGQSLA 797
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG + P A + RVANSQKC+R GG HNDL GRD
Sbjct: 66 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGHHNDLEDVGRDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P +RL+ ++
Sbjct: 126 SHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQ-VYGIPEERLWVSY 171
>gi|38569417|ref|NP_065796.1| alanine--tRNA ligase, mitochondrial [Homo sapiens]
gi|124297995|gb|AAI31729.1| Alanyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
gi|208967617|dbj|BAG72454.1| alanyl-tRNA synthetase 2, mitochondrial [synthetic construct]
Length = 985
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 275/811 (33%), Positives = 406/811 (50%), Gaps = 86/811 (10%)
Query: 21 FLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANS 75
FL++F + GH LV S+ + P GD S+ FVN+GM QFK +FLG A + RVANS
Sbjct: 46 FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105
Query: 76 QKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN-DYYKRDACRMALEFLTKPPVSLPL 134
QKCVR GG HNDL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P
Sbjct: 106 QKCVRAGGHHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQV-YGIPE 164
Query: 135 DRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEI 194
+RL+ +YF G + GL D ETRDIWL LGVP + G + NFWEMG TGPCG +EI
Sbjct: 165 ERLWISYFDGDPKAGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPCTEI 224
Query: 195 HYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVT 254
HYD+ G L+E+WN+VF+ H R + ++ PL + ++DTG+G ERLV
Sbjct: 225 HYDLAG---------GVGAPQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGLERLVA 275
Query: 255 ILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVAL 314
+LQ K STYDTDLF PLL I++ A PY ++ DT+YR+++D+ R ++V +
Sbjct: 276 VLQGKHSTYDTDLFSPLLNAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCI 335
Query: 315 ADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSI 371
+D +FP + LR ++R A+ S ++ K G + L + E LGD YPE+Q +
Sbjct: 336 SDGVFPGMSGPPLVLRRILRRAVRFSMEILKAPPG-FLGSLVPVVVETLGDAYPELQRNS 394
Query: 372 NKIQLILGEESRIFDNLRKAAVKEWKPLV-KTQPELEQFNIMEEPGLVLGVKYLTKQLAR 430
+I ++ E+ F A+++ + ++ +T L ++ P V L L
Sbjct: 395 AQIANLVSEDEAAF----LASLERGRRIIDRTLRTLGPSDMF--PAEVAWSLSLCGDLGL 448
Query: 431 DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASN 490
+ E+ + D+ GL + L E + + + + K +
Sbjct: 449 PLDMVELMLEEKGVQLDSAGLER-------------LAQEEAQHRARQAEPVQKQGLWLD 495
Query: 491 VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRH 550
V + + + P TDD KY+Y S Y F + ++ Q++ D A+
Sbjct: 496 VHALGELQRQGVPPTDDSPKYNYSLRP-SGSYEFGTCEAQVL------QLYTEDGTAV-- 546
Query: 551 ARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELAS 610
AS+ Q GL+ D+TN YA GGQ D G YL QE+ +
Sbjct: 547 ----ASVGKGQR-----CGLLLDRTNFYAEQGGQASDRG--YLVRAGQEDVLFPVARAQV 595
Query: 611 LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQK 669
G I+H ++ G ++ VD RLGCM HT +HLLN ALR+ L T Q+
Sbjct: 596 CGGFILHEAVAPECLRL--GDQVQLHVDEAWRLGCMAKHTATHLLNWALRQTLGPGTEQQ 653
Query: 670 SCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTV 729
+ ++ LD + L+ + + AVE + + + V +M E+P L
Sbjct: 654 GSHLNPEQLRLDVTTQ-TPLTPEQLRAVENTVQEAVGQDEAV---YM--EEVP-LALTAQ 706
Query: 730 IPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
+PG E+YPD V L S S E CCGTH+ TG + +I
Sbjct: 707 VPGLRSLDEVYPDPVRVVSVGVPVAHALDPASQAALQTSVELCCGTHLLRTGAVGDLVII 766
Query: 774 GYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
G + + G + +TG+ ++ A E G+ L+
Sbjct: 767 GDRQLSKGTTRLLAVTGEQAQQARELGQSLA 797
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RVANSQKC+R GG HNDL GRD
Sbjct: 66 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGHHNDLEDVGRDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P +RL+ ++
Sbjct: 126 SHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQ-VYGIPEERLWISY 171
>gi|114607605|ref|XP_518510.2| PREDICTED: alanine--tRNA ligase, mitochondrial [Pan troglodytes]
Length = 985
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 274/810 (33%), Positives = 401/810 (49%), Gaps = 84/810 (10%)
Query: 21 FLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANS 75
FL++F + GH LV S+ + P GD S+ FVN+GM QFK +FLG A + RVANS
Sbjct: 46 FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105
Query: 76 QKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN-DYYKRDACRMALEFLTKPPVSLPL 134
QKCVR GG HNDL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P
Sbjct: 106 QKCVRAGGHHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQV-YGIPE 164
Query: 135 DRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEI 194
+RL+ +YF G + GL D ETRDIWL LGVP + G + NFWEMG TGPCG +EI
Sbjct: 165 ERLWISYFDGDPKAGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPCTEI 224
Query: 195 HYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVT 254
HYD+ G L+E+WN+VF+ H R + ++ PL + ++DTG+G ERLV
Sbjct: 225 HYDLAG---------GVGAPQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGLERLVA 275
Query: 255 ILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVAL 314
+LQ K STYDTDLF PLL I++ A PY ++ DT+YR+++D+ R ++V +
Sbjct: 276 VLQGKHSTYDTDLFSPLLNAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCI 335
Query: 315 ADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSI 371
+D +FP + LR ++R A+ S ++ K G + L + E LGD YPE+Q +
Sbjct: 336 SDGIFPGMSGPPLVLRRILRRAVRFSMEILKAPPG-FLGSLVPVVVETLGDAYPELQRNS 394
Query: 372 NKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARD 431
+I ++ E+ F + + ++T + F P V L L
Sbjct: 395 AQIANLVSEDEAAFLASLERGRRIIDRTLRTLGPSDMF-----PAEVAWSLSLCGDLGLP 449
Query: 432 PSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNV 491
+ E+ + D+ GL + L E + + + + K +V
Sbjct: 450 LDMVELMLEEKGVQLDSAGLER-------------LAQEEAQHRARQAEPVQKQGLWLDV 496
Query: 492 PDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHA 551
+ + + P TDD KY+Y S Y F + ++ Q++ D A+
Sbjct: 497 HALGELQRQGVPPTDDSPKYNYSLRP-SGSYEFGTCEAQVL------QLYTEDGTAV--- 546
Query: 552 RSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASL 611
AS+ Q GL+ D+TN YA GGQ D G YL QE+ +
Sbjct: 547 ---ASVGKGQR-----CGLLLDRTNFYAEQGGQASDRG--YLVRAGQEDVLFPVARAQVC 596
Query: 612 EGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKS 670
G I+H ++ G ++ VD RLGCM HT +HLLN ALR+ L T Q+
Sbjct: 597 GGFILHEAVAPECLRL--GDQVQLHVDEAWRLGCMAKHTATHLLNWALRQTLGPGTEQQG 654
Query: 671 CRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVI 730
+ ++ LD + L+ + + AVE + + + V +M E+P L +
Sbjct: 655 SHLNPEQLRLDVTTQ-TPLTPEQLRAVENTVQEAVGQDEAV---YM--EEVP-LALTAQV 707
Query: 731 PG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
PG E+YPD V L S S E CCGTH+ TG + +IG
Sbjct: 708 PGLRSLDEVYPDPVRVVSVGVPVAHALDPASQAALQTSVELCCGTHLLRTGAVGDLVIIG 767
Query: 775 YKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
+ + G + +TG+ ++ A E G+ L+
Sbjct: 768 DRQLSKGTTRLLAITGEQAQQARELGQSLA 797
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RVANSQKC+R GG HNDL GRD
Sbjct: 66 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGHHNDLEDVGRDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P +RL+ ++
Sbjct: 126 SHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQ-VYGIPEERLWISY 171
>gi|255948530|ref|XP_002565032.1| Pc22g10240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592049|emb|CAP98312.1| Pc22g10240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 958
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 274/820 (33%), Positives = 413/820 (50%), Gaps = 86/820 (10%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAP---- 68
++ +R +FLDYF GHT V SSP+ P D ++ F N+GM QFK++FLG A
Sbjct: 9 TAQRVRDTFLDYF-KQNGHTFVPSSPVAPLSDPTLLFTNAGMNQFKSIFLGTVDASSDFG 67
Query: 69 -YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + LT+
Sbjct: 68 KMKRATNSQKCLRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAITYSWTLLTE 127
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
L DRLY TYF G++ GL D E +++W +GVP HI MK NFWEMG GP
Sbjct: 128 V-YGLDPDRLYVTYFEGNEAGGLEPDLEAKELWKSVGVPESHILPGDMKDNFWEMGDQGP 186
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SE+HYD G ++A VN D +++EIWN VFI + R ++ L ++DTG+
Sbjct: 187 CGPCSEVHYDRIGGRNAAHL-VNEDDPNVLEIWNNVFIQYNREPDSSLRSLPNKHVDTGM 245
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV+ILQNK S YDTD+F P+ + I+ +GA+ Y F + +DT+YR+++D+
Sbjct: 246 GFERLVSILQNKPSNYDTDVFTPIFQAIQNTTGAREYRGQFGADDADGIDTAYRVVADHV 305
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R + A++D + P+ + +R V+R + F+V G +L + + LG+++
Sbjct: 306 RTLMFAISDGVIPNNEGRGYVIRRVLRRGARYARKYFQVDIGNFFAKLVPTVVDQLGEMF 365
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ + IL EE F K L + + + EQ+
Sbjct: 366 PELKRKQQDVVEILDEEELSFA----------KTLDRGERQFEQY--------------- 400
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
Q A+ + G + LYDT+G ++ + +A + L + FE+ + KE SK
Sbjct: 401 -AQQAKVKGTDMLHGADVWRLYDTFGFPVDLTRIMAEERGLRIDDVEFEEARLKAKEASK 459
Query: 485 A--KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
KAA N +D+ DL +D K D +S ++ + ++
Sbjct: 460 GQKKAAENTVKLDVHDLGKLEKMNDVQKTD-----DSPKFGRGNITAHV----------- 503
Query: 543 IDKHAIRHARS-GASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
AI H ++ S D + A +G+I D TN YA GGQ +D G + +
Sbjct: 504 ---KAIYHGKTFHKSTDDV--PEGAQLGIILDCTNFYAEQGGQENDTGKIIIDGQAE--- 555
Query: 602 KVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
+E+G++ S G ++H G + SF V G + E D R HT +H+LN AL+
Sbjct: 556 -LEVGDVQSYAGYVLHTGFMKYGSFTV--GNSVICEYDELRRWPIRNNHTGTHILNFALK 612
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
VL QK V +++ DFS + +S + +E + I V + + +
Sbjct: 613 EVLGDGVEQKGSLVAAEKLRFDFS-HKTAISDAELENIEAKSTEYIRQNCAVYSQELPLA 671
Query: 720 ELPFLTHLTVIPGEIYPDDV-----------ILIDISD-KENVISREPCCGTHVFNTGHI 767
++ + + GE YPD V IL ++ D + +S E C GTHV TG I
Sbjct: 672 TAQQISGVRAVFGETYPDPVRVVSVGVELEEILKNVKDPRWQEVSIEFCGGTHVQKTGDI 731
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHL 803
+ ++ GVR I +TG+ + + A E G+ L
Sbjct: 732 KDLIILEESGIAKGVRRIIAVTGEDAHEVQRVAEEFGQRL 771
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 69/106 (65%), Gaps = 6/106 (5%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTPAP-----YPRVANSQKCIRVGGKHNDLSFAGRDS 873
P D ++ F N+GM QFK++FLG A R NSQKC+R GGKHNDL G+DS
Sbjct: 36 PLSDPTLLFTNAGMNQFKSIFLGTVDASSDFGKMKRATNSQKCLRAGGKHNDLDDVGKDS 95
Query: 874 YHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++A + LT+ L DRLY T+
Sbjct: 96 YHHTFFEMLGNWSFGDYFKKEAITYSWTLLTE-VYGLDPDRLYVTY 140
>gi|169603389|ref|XP_001795116.1| hypothetical protein SNOG_04704 [Phaeosphaeria nodorum SN15]
gi|160706385|gb|EAT88464.2| hypothetical protein SNOG_04704 [Phaeosphaeria nodorum SN15]
Length = 960
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 269/798 (33%), Positives = 401/798 (50%), Gaps = 85/798 (10%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
+K +R +FLDYF GH+ V SS +VP D ++ F N+GM Q+K++F G A
Sbjct: 12 AKKVRQTFLDYF-KKNGHSFVPSSSVVPLSDPTLLFTNAGMNQYKSIFQGTVDPSSDFAS 70
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R ANSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A E +TK
Sbjct: 71 LKRAANSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIGFTWELMTKV 130
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
+ +RLY TYF G+D GL D E +++W GVP DHI MK NFWEMG GPC
Sbjct: 131 -YGIDPNRLYVTYFEGAD--GLEPDLEAKELWKSAGVPEDHILPGDMKDNFWEMGDQGPC 187
Query: 189 GYSSEIHYDMK----GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
G SE+HYD++ G+ +A VN D ++IEIWN VF+ + R ++ PL +ID
Sbjct: 188 GPCSEVHYDLREPVDGKYRNASDLVNKDDPEVIEIWNNVFMQYNREPDRSLRPLPNKHID 247
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
TG+GFERLV++LQ K S YDTD+F PL + I+ ++GA+PY F + +DT+YR+++
Sbjct: 248 TGMGFERLVSVLQKKMSNYDTDVFTPLFKRIQDITGARPYNGKFGKEDPDGIDTAYRVVA 307
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D++RM++ A+AD P+ + +R V+R + + F V+ G ++ + E +G
Sbjct: 308 DHTRMMSFAIADGGVPNNVGRGYVVRRVLRRGARYARNYFGVEIGNFFSKIIPTLVEQMG 367
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
D++PEI+ I IL EE + F K L + G +
Sbjct: 368 DMFPEIKKKQQDIIEILDEEEKAFA----------KSL--------------DRGETIFK 403
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
KY+ K A+ ++ GD + LYDTYG ++ + +A L + + E+ + +E
Sbjct: 404 KYVAK--AQKAGSNDLPGDDVWRLYDTYGFPVDLTKLMAEENGLNINDKEVEEAQEKARE 461
Query: 482 RSKA--KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
SK AA V D+ DL DD K D +S +Y + T + I
Sbjct: 462 ASKGDKAAAGVVVKFDVHDLAALDSMDDVPKTD-----DSFKYGRENITTTIKAIY---- 512
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
H + +S + ++ G++ DKTN YA GGQ D G + +
Sbjct: 513 ------HNKKFLKS-----TSEVPEGEQFGVLLDKTNFYAEQGGQEYDTGRLLIDGEAE- 560
Query: 600 NGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
+ + + G ++H G + KV G E D R HT +H+LN A
Sbjct: 561 ---ISVDNVQVYAGYVLHTGYLKYGELKV--GSEVIAEFDELRRNPIRNNHTGTHVLNYA 615
Query: 659 LRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
LR L QK V ++ DFS + L+ + VE +D I +V + +
Sbjct: 616 LRETLGNEVDQKGSLVAPEKLRFDFS-HKAGLTDAELKKVEDISSDYIRQNAEVYAKDVP 674
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFNTG 765
++ + L + GE YPD V ++ + ++K + +S E C GTHV TG
Sbjct: 675 LAQAKEIRGLRAVFGETYPDPVRVVSVGVPIEDLLADVKNEKWDKLSIEFCGGTHVLKTG 734
Query: 766 HIESCTVIGYKSYNHGVR 783
I+ ++ G+R
Sbjct: 735 DIKELVILEESGIAKGIR 752
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++F G A R ANSQKCIR GGKHNDL G+D
Sbjct: 37 VPLSDPTLLFTNAGMNQYKSIFQGTVDPSSDFASLKRAANSQKCIRAGGKHNDLDDVGKD 96
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A E +TK + +RLY T+
Sbjct: 97 SYHHTFFEMLGNWSFGDYFKKEAIGFTWELMTK-VYGIDPNRLYVTY 142
>gi|407929570|gb|EKG22385.1| Alanyl-tRNA synthetase class IIc [Macrophomina phaseolina MS6]
Length = 963
Score = 414 bits (1065), Expect = e-112, Method: Compositional matrix adjust.
Identities = 275/822 (33%), Positives = 407/822 (49%), Gaps = 88/822 (10%)
Query: 1 MNNPNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNV 60
M + + ++ +R +FLDYF GHT V SS +VP D ++ F N+GM Q+K++
Sbjct: 1 MASSTVDQQTEWSAQRVRDTFLDYF-KKNGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSI 59
Query: 61 FLGLTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKR 115
FLG A R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K+
Sbjct: 60 FLGTVDPNSDFATLKRAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKK 119
Query: 116 DACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGM 175
+A + E LTK L DRLY TYF G GL DEE R+ W +GV DHI K
Sbjct: 120 EAIEYSWELLTKV-YGLDPDRLYVTYFEGDQSLGLEADEEARNYWKAVGVAEDHILKGNA 178
Query: 176 KCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTI 235
K NFWEMG GPCG SE+HYD G ++A VN D +++EIWN VFI + R ++
Sbjct: 179 KDNFWEMGDQGPCGPCSEVHYDRIGGRNAAHL-VNQDDPNVLEIWNNVFIQYNREPDRSL 237
Query: 236 VPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTD 295
L ++DTG+G+ERLV++LQNK S YDTD+F PL + I++++G + Y F +
Sbjct: 238 RSLPNKHVDTGMGYERLVSVLQNKMSNYDTDVFTPLFKRIQEITGVREYRGKFGEEDADG 297
Query: 296 LDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKEL 352
+DT+YR+++D+ R++T A++D PDA + +R V+R + + G ++
Sbjct: 298 IDTAYRVVADHVRLLTFAISDGAIPDAVGRGYVVRRVLRRGARYARKYLQTDIGSFFSKI 357
Query: 353 SYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIM 412
+ E +GD++PEI+ ++ IL EE + F K L
Sbjct: 358 VPTLVEQVGDMFPEIKKREQDVKEILDEEEQAFA----------KSL------------- 394
Query: 413 EEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF 472
+ G V+ +Y KQ+ S +I G + LYDTYG +++ +A + LT+
Sbjct: 395 -DRGEVMFDRY-AKQVEASGS-KKIPGKDVWRLYDTYGFPEDLTLIMAEERGLTIDDAEV 451
Query: 473 EQKLNELKERSKA--KAASNVPDID------LMDLKHFPVTDDKYKYDYHYDTNSKRYTF 524
+ +E SK KA SN+ +D L D+K P TDD +K+
Sbjct: 452 REAQAIAREASKGAKKAGSNIVKLDVHALGQLQDMK-VPTTDDSFKF------------- 497
Query: 525 PCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQ 584
N+ V AI H + ++ +G++ DKTN YA GGQ
Sbjct: 498 --AKENITAKV----------KAIYHPEKKFIKSTSEIGEGEQIGVVLDKTNFYAEQGGQ 545
Query: 585 IDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLG 644
D G + + V+ ++++ G ++H G +S ++ E D R
Sbjct: 546 EYDTGKILIEGANEAAFDVQNVQVSN--GFVLHTG-YLSYGALSVEDEVICEYDELRRNP 602
Query: 645 CMRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIND 703
HT +H+LN ALR VL QK V ++ DFS + + ++ + +E N
Sbjct: 603 IRNNHTGTHVLNYALREVLGGDIEQKGSLVAPEKLRFDFS-HKQGITEAEIQKIETISNG 661
Query: 704 VIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS--------DKEN----VI 751
I + V + +E + + + GE YPD V ++ I D EN +
Sbjct: 662 YIRDNRTVYIEPVAVAEAHKIRGVRAVFGEKYPDPVRVVSIGVPVSELLKDPENEAWAKL 721
Query: 752 SREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
S E C GTHV +TG I+ V+ G+R I +TG +
Sbjct: 722 SIEFCGGTHVASTGEIKELVVVEESGIAKGIRRIIAVTGQGA 763
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 39 VPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDFATLKRAVNSQKCIRAGGKHNDLDDVGKD 98
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK L DRLY T+
Sbjct: 99 SYHHTFFEMLGNWSFGDYFKKEAIEYSWELLTK-VYGLDPDRLYVTY 144
>gi|167518337|ref|XP_001743509.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778608|gb|EDQ92223.1| predicted protein [Monosiga brevicollis MX1]
Length = 1000
Score = 414 bits (1065), Expect = e-112, Method: Compositional matrix adjust.
Identities = 269/819 (32%), Positives = 413/819 (50%), Gaps = 86/819 (10%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
+ +R +++D+F + H SS VP+ D ++ F N+GM QFK VF G A
Sbjct: 9 AAKVRQTYIDFFVEKKEHVFWPSSSSVPHDDPTLLFCNAGMNQFKKVFQGTVDPNSDMAK 68
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K +A + + E LT+
Sbjct: 69 VSRTVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKAEAIQWSFELLTE- 127
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
L DRLY TYF G + +P D E +++WL+L +P DH+ K NFWEMG+TGPC
Sbjct: 128 VYGLSADRLYATYFEGDTEQNIPEDVEAKELWLKL-LPADHVLPGNKKDNFWEMGATGPC 186
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G SE+HYD G ++A + VN D D++EIWN+VF+ R ++ L +IDTG+G
Sbjct: 187 GPCSELHYDRIGGRNAA-SLVNQDDPDVLEIWNLVFMQFNREPDASLRLLPARHIDTGMG 245
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
ERLV++LQ+K S YDTD+F P + I++V G +PY + +DT+YR+L+D+ R
Sbjct: 246 LERLVSVLQDKRSNYDTDVFQPYFDVIQQVCGCRPYAGKVGKED-DGIDTAYRVLADHIR 304
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
+T++++D PD T + LR ++R A+ +ED K + L + E LGD +P
Sbjct: 305 TLTISISDGGEPDNTGRGYVLRLIIRRAVRFAEDYLKAPE-YFFSSLVPTVVEQLGDAFP 363
Query: 366 EIQ-DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
EI+ D + I+++ EE + L + + L
Sbjct: 364 EIKRDPEHVIEVLKAEEKQFRRTLNRG------------------------------RRL 393
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
++ A + I G +A+ L+ TYG ++ + +A + LT+ + FE E + S+
Sbjct: 394 FQRAADKATDGVIDGHVAWQLWGTYGFPVDLTKVMAEERGLTVDEKTFEAAREEAVKVSQ 453
Query: 485 --AKAASNVPDIDLMDLKHF-----PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
K A D+D+ DL TDD +KYDY Y F L+ +V +
Sbjct: 454 MGKKMAIEGIDLDVHDLDKLKADGIAATDDSFKYDYGL-VGDNSYEFKDLEAKVVAL--- 509
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAW-VGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
SG +DS+ ++ VG++ D+TN YA GGQ D G N
Sbjct: 510 ------------RTESG-FVDSLDGSDDSVNVGVVLDRTNFYAEQGGQTYDTGFFRDANG 556
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+ +++ + +H G V+S+ + G T + D R CM HT +H+LN
Sbjct: 557 ELDFTVMDVQKKGPY---CLHIG-VLSNGTLKVGDTLTLSFDVERRRPCMSNHTATHVLN 612
Query: 657 AALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR+VL QK V + DF+ + ++++ + EK +N+V+ + VD
Sbjct: 613 FALRKVLGEADQKGSLVEPERLRFDFTAK-KGMTIEQIQQTEKLVNEVVNAKKPVDAMDA 671
Query: 717 RASELPFLTHLTVIPGEIYPD------------DVILIDISDKENVISREPCCGTHVFNT 764
+ + L + GE YPD DV+ +S+ S E C GTHV N+
Sbjct: 672 PLASAREINGLRAMFGETYPDPVRVVSVGAIVKDVLDDPVSEVALANSIEFCGGTHVKNS 731
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
G I ++ ++ + G+R I +TG ++ A L
Sbjct: 732 GDIVQFAILNEEAISKGIRRIVAVTGSEARKAQTEANRL 770
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 71/108 (65%), Gaps = 6/108 (5%)
Query: 817 NIPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGR 871
++P+ D ++ F N+GM QFK VF G A R NSQKCIR GGKHNDL G+
Sbjct: 34 SVPHDDPTLLFCNAGMNQFKKVFQGTVDPNSDMAKVSRTVNSQKCIRAGGKHNDLDDVGK 93
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
D+YHHTFFEMLGNWSF DY+K +A + + E LT+ L DRLY T+
Sbjct: 94 DTYHHTFFEMLGNWSFGDYFKAEAIQWSFELLTE-VYGLSADRLYATY 140
>gi|6331226|dbj|BAA86584.1| KIAA1270 protein [Homo sapiens]
Length = 986
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 275/811 (33%), Positives = 406/811 (50%), Gaps = 86/811 (10%)
Query: 21 FLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANS 75
FL++F + GH LV S+ + P GD S+ FVN+GM QFK +FLG A + RVANS
Sbjct: 47 FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 106
Query: 76 QKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN-DYYKRDACRMALEFLTKPPVSLPL 134
QKCVR GG HNDL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P
Sbjct: 107 QKCVRAGGHHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQV-YGIPE 165
Query: 135 DRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEI 194
+RL+ +YF G + GL D ETRDIWL LGVP + G + NFWEMG TGPCG +EI
Sbjct: 166 ERLWISYFDGDPKAGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPCTEI 225
Query: 195 HYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVT 254
HYD+ G L+E+WN+VF+ H R + ++ PL + ++DTG+G ERLV
Sbjct: 226 HYDLAG---------GVGAPQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGLERLVA 276
Query: 255 ILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVAL 314
+LQ K STYDTDLF PLL I++ A PY ++ DT+YR+++D+ R ++V +
Sbjct: 277 VLQGKHSTYDTDLFSPLLNAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCI 336
Query: 315 ADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSI 371
+D +FP + LR ++R A+ S ++ K G + L + E LGD YPE+Q +
Sbjct: 337 SDGVFPGMSGPPLVLRRILRRAVRFSMEILKAPPG-FLGSLVPVVVETLGDAYPELQRNS 395
Query: 372 NKIQLILGEESRIFDNLRKAAVKEWKPLV-KTQPELEQFNIMEEPGLVLGVKYLTKQLAR 430
+I ++ E+ F A+++ + ++ +T L ++ P V L L
Sbjct: 396 AQIANLVSEDEAAF----LASLERGRRIIDRTLRTLGPSDMF--PAEVAWSLSLCGDLGL 449
Query: 431 DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASN 490
+ E+ + D+ GL + L E + + + + K +
Sbjct: 450 PLDMVELMLEEKGVQLDSAGLER-------------LAQEEAQHRARQAEPVQKQGLWLD 496
Query: 491 VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRH 550
V + + + P TDD KY+Y S Y F + ++ Q++ D A+
Sbjct: 497 VHALGELQRQGVPPTDDSPKYNYSLRP-SGSYEFGTCEAQVL------QLYTEDGTAV-- 547
Query: 551 ARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELAS 610
AS+ Q GL+ D+TN YA GGQ D G YL QE+ +
Sbjct: 548 ----ASVGKGQR-----CGLLLDRTNFYAEQGGQASDRG--YLVRAGQEDVLFPVARAQV 596
Query: 611 LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQK 669
G I+H ++ G ++ VD RLGCM HT +HLLN ALR+ L T Q+
Sbjct: 597 CGGFILHEAVAPECLRL--GDQVQLHVDEAWRLGCMAKHTATHLLNWALRQTLGPGTEQQ 654
Query: 670 SCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTV 729
+ ++ LD + L+ + + AVE + + + V +M E+P L
Sbjct: 655 GSHLNPEQLRLDVTTQ-TPLTPEQLRAVENTVQEAVGQDEAV---YM--EEVP-LALTAQ 707
Query: 730 IPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
+PG E+YPD V L S S E CCGTH+ TG + +I
Sbjct: 708 VPGLRSLDEVYPDPVRVVSVGVPVAHALDPASQAALQTSVELCCGTHLLRTGAVGDLVII 767
Query: 774 GYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
G + + G + +TG+ ++ A E G+ L+
Sbjct: 768 GDRQLSKGTTRLLAVTGEQAQQARELGQSLA 798
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RVANSQKC+R GG HNDL GRD
Sbjct: 67 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGHHNDLEDVGRDL 126
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P +RL+ ++
Sbjct: 127 SHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQ-VYGIPEERLWISY 172
>gi|403215817|emb|CCK70315.1| hypothetical protein KNAG_0E00470 [Kazachstania naganishii CBS
8797]
Length = 956
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 272/814 (33%), Positives = 410/814 (50%), Gaps = 92/814 (11%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + +K++R++F+DYF + HT V SSP+VP+ D ++ F N+GM Q+K +F G +
Sbjct: 3 IGDKEKWTAKNVRNTFMDYFKQRE-HTFVHSSPVVPFDDPTLLFANAGMNQYKPIFQGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
P+ R NSQKCVR GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A +
Sbjct: 62 DPSSDFYTLKRAYNSQKCVRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAIQF 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
A E LT +P DRLY TYF G + GL DEE R +W ++GV DHI K NFW
Sbjct: 122 AWELLT-VVYGIPSDRLYVTYFEGDSKLGLQPDEEARQLWRDVGVLDDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SE+HYD G ++A + VN D D++E+WN+VF+ R ++ L
Sbjct: 181 EMGEQGPCGPCSEVHYDRIGGRNAA-SLVNMDDPDVLEVWNLVFMQFNREQDGSLKSLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F+PL + I++++ A+PY F+ + +DT+Y
Sbjct: 240 KHIDTGMGFERLVSVLQDVRSNYDTDVFIPLFKRIQEITNARPYAGKFSEEDADGVDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R + ALAD P+ + LR ++R + G L+ +
Sbjct: 300 RVLADHVRTLMFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
E + D++PE+ + + IL EE F K L + + E++
Sbjct: 360 EQVKDIFPELAKDPSFLFEILDEEEASF----------AKTLDRGERLFEKYAAT----- 404
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
A + S + G + LYDTYG ++ + +A K L + FE+
Sbjct: 405 -----------AAENSTKTLDGKQVWRLYDTYGFPVDLTELMAEEKGLKIDGPGFEKAKQ 453
Query: 478 ELKERSKAKAAS--------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
E E SK NV ++ ++ ++ P TDD S +Y F +D
Sbjct: 454 ESYEASKRGGKKDDTSLIKLNVHELSELNNENVPKTDD-----------SAKYGFENIDA 502
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
++ + G A +D I E + G+I DK+ YA GGQ D G
Sbjct: 503 KILKLHDGT----------------AFVDEI-TETDKKYGMILDKSCFYAEQGGQEYDTG 545
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ + + N VE +L + G + H G++ K++ G D R H
Sbjct: 546 KIVIDDVAEFN--VENVQLYN--GFVFHTGSLKEG-KLSVGDKVIASYDELRRFPIKNNH 600
Query: 650 TTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +H+LN ALR+V+ QK V ++ DFS + + LS+D V +VE N+ I
Sbjct: 601 TGTHILNFALRQVIGKEVDQKGSLVAPEKLRFDFS-HKKALSLDEVRSVENVCNEQIKES 659
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISDKE-NVISREPC 756
+ V + + + ++ + + GE YPD D +L D +++E N S E C
Sbjct: 660 LSVYYKDVPLEQAKAISSVRAVFGETYPDPVRVVSIGKPVDELLADPANEEWNKYSVEFC 719
Query: 757 CGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
GTHV T I+ ++ G+R I +TG
Sbjct: 720 GGTHVVKTSDIKFLVILEENGIAKGIRRIVAVTG 753
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +F G + P+ R NSQKC+R GGKHNDL G+D
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFQGTVDPSSDFYTLKRAYNSQKCVRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + A E LT +P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAIQFAWELLT-VVYGIPSDRLYVTY 141
>gi|443893907|dbj|GAC71363.1| alanyl-trna synthetase [Pseudozyma antarctica T-34]
Length = 1056
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 278/806 (34%), Positives = 393/806 (48%), Gaps = 88/806 (10%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R +F YF Q HT V SS +PY D ++ F N+GM Q+K +FLG+ R
Sbjct: 93 VRDTFTAYFKERQ-HTFVPSSSTIPYDDPTLLFANAGMNQYKPIFLGIADPNSAFGSMKR 151
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K +A MA E LTK
Sbjct: 152 AVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKPEAIAMAWELLTKV-YG 210
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY TYF G + GL D E RD+WL++GV DHI K NFWEMG+TGPCG
Sbjct: 211 LPKDRLYVTYFEGDAKQGLEPDTEARDLWLKVGVDADHILTGDAKDNFWEMGATGPCGPC 270
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIHYD G ++A VN D ++IEIWN VF+ R ++ PL +IDTG+GFER
Sbjct: 271 SEIHYDRIGGRNAAHL-VNMDDPNVIEIWNNVFMQFNREDDGSLRPLPAKHIDTGMGFER 329
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV+ILQ+K S YDTD+F P+ I++++GA+ Y + +DT+YR+++D+ R +T
Sbjct: 330 LVSILQDKPSNYDTDVFTPIFAKIQQLTGARAYTGKLGAQDTDGIDTAYRVVADHVRTLT 389
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A++D PD + LR ++R F+V G +L + + +G +PEI
Sbjct: 390 FAISDGGVPDRDGRGYVLRRILRRGTRYVRKYFQVPIGSFFSQLVPTLVDQMGHFFPEIT 449
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
I+ ++ IL EE F + L + + E++ +KQL
Sbjct: 450 KKIDDVKAILDEEEASFA----------RTLDRGEKLFEEYAAKA-------KAAGSKQL 492
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA--- 485
SG + LYDT+G ++ +A L + + FE E KE SKA
Sbjct: 493 ---------SGADVWKLYDTFGFPVDLTLIMAEEHGLGVNEKEFEAAQAESKELSKAGGK 543
Query: 486 KAASNVPDIDLMDLKHFPVTDD--KYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
K+ + D+ DL H D K + D+ Y NS +D + I F
Sbjct: 544 KSEAEAVKFDVHDLGHLEKDDSVPKTQDDFKYSLNS-------VDATVKAIYQDHAFFPE 596
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ---EN 600
A++ G++ D+T LYA +GGQ D G + +Q E+
Sbjct: 597 TAKVADRAKN--------------FGILLDRTCLYAESGGQQADTGSITIDGKSQFVVED 642
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
+V G ++H G++V ++ G V D R HT +H+LN LR
Sbjct: 643 AQV-------FSGYVLHIGHLVRG-ELALGDKVTVSYDQSRRAPLQSNHTATHILNFGLR 694
Query: 661 RVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
VL QK V + DFS + + ++V + +E D I V V + M
Sbjct: 695 EVLGDHIDQKGSLVAPAKLRFDFS-HKQGVNVQELKKIEHISVDWIKRNVGVFSKEMELD 753
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDI--------SDKEN----VISREPCCGTHVFNTGHI 767
+ L + GE YP+ V ++ + SD EN S E C GTHV TG I
Sbjct: 754 TAQKIPGLRAVFGEAYPNPVRVVTLEHDLDTIASDLENPRWRSTSVEFCGGTHVAKTGEI 813
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSS 793
+ G+R I +TGD +
Sbjct: 814 GDFVITEESGIAKGIRRIIAVTGDEA 839
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM Q+K +FLG+ R NSQKCIR GGKHNDL G+D
Sbjct: 115 IPYDDPTLLFANAGMNQYKPIFLGIADPNSAFGSMKRAVNSQKCIRAGGKHNDLDDVGKD 174
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K +A MA E LTK LP DRLY T+
Sbjct: 175 TYHHTFFEMLGNWSFGDYFKPEAIAMAWELLTK-VYGLPKDRLYVTY 220
>gi|356538581|ref|XP_003537781.1| PREDICTED: alanyl-tRNA synthetase-like [Glycine max]
Length = 950
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 264/819 (32%), Positives = 417/819 (50%), Gaps = 102/819 (12%)
Query: 10 VRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP--- 66
V +K +R +F+ +F + + H KSSP+VP+ D ++ F N+GM QFK +FLG
Sbjct: 9 VEWPAKRVRDTFISFFQD-KNHVNWKSSPVVPFNDPTLLFANAGMNQFKPIFLGTADPNT 67
Query: 67 --APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEF 124
+ R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K +A A E
Sbjct: 68 ALSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKVEAISWAWEL 127
Query: 125 LTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGS 184
LTK LP DR+Y TYFGG D+ GL D E RDIWL+ +P + K NFWEMG
Sbjct: 128 LTKV-YKLPSDRIYATYFGGDDKSGLAPDLEARDIWLKF-LPPGRVLPFDCKDNFWEMGD 185
Query: 185 TGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
TGPCG +EIH+D G +A + VN D IEIWN+VFI R + ++ PL ++D
Sbjct: 186 TGPCGPCTEIHFDRIGNRDAA-SLVNNDDPTCIEIWNLVFIQFNREADGSLKPLPAKHVD 244
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
TG+GFERL +ILQ+K S YDTD+FLP+ + I++ +GA+PY + +D +YR+++
Sbjct: 245 TGMGFERLTSILQDKMSNYDTDVFLPIFDVIQRATGARPYSGKVGPDDADKVDMAYRVVA 304
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D+ R ++ A+AD P + LR ++R A+ +V K K+G L + ++G
Sbjct: 305 DHIRTLSFAIADGSRPGNDGREYVLRRILRRAVRYGREVLKAKEG-FFNGLVSVVVNVMG 363
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
DV+PE++ +E+ I + + + + L+K +E+F V
Sbjct: 364 DVFPELKQ----------QETHIRNIIEEEEESFGRTLIKG---IEKFEA--------AV 402
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
+ + + +SG+ AF L+DTYG ++ Q +A K L + + F+ + +E
Sbjct: 403 RQVQGNI--------LSGEEAFVLWDTYGFPLDLTQLMAEEKGLVVDVKGFDSAMEAARE 454
Query: 482 RSKAKAASNVPDIDLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
RS++ +MD + T+D +KY + D S
Sbjct: 455 RSRSAQTKQAGGAIVMDADATSALHKRGIVPTNDSFKYAWFKDHES-------------- 500
Query: 534 IVIGDQVFCIDKHAIRHARSGAS-IDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
++ +G+ +D++ + +G++ + T+ YA GGQI D G
Sbjct: 501 -------------VVKAIYTGSEFVDTVNTGDD--IGVVLESTSFYAEQGGQIFDTG--- 542
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+ + E+ + G ++H GN V+ G +VD R HT +
Sbjct: 543 --SLEGPHALFEVRNVQVYGGFVLHIGNGTG---VSVGDKVVCKVDYGRRALIAPNHTCT 597
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
H+LN ALR VL QK V +++ DFS +G+ + D++ +E +N+ I ++ V
Sbjct: 598 HMLNFALREVLGDHVDQKGSIVLAEKLRFDFS-HGKPIEADNLRRIESIVNEQIKAELDV 656
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDK-ENV-----------ISREPCCGT 759
+ +E + L + GE+YPD V ++ I K E++ IS E C GT
Sbjct: 657 SAKEATLAEAKGINGLRAVFGEVYPDPVRVVSIGQKVEDLLADPKNEKWLSISSELCGGT 716
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
H+ NT ++ ++ + G+R I +T D + A++
Sbjct: 717 HISNTREAKAFALLSEEGIAKGIRRITAVTTDRAYDAMK 755
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG + R N+QKCIR GGKHNDL G+D
Sbjct: 38 VPFNDPTLLFANAGMNQFKPIFLGTADPNTALSKLSRACNTQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K +A A E LTK LP DR+Y T+
Sbjct: 98 TYHHTFFEMLGNWSFGDYFKVEAISWAWELLTK-VYKLPSDRIYATY 143
>gi|239608271|gb|EEQ85258.1| alanyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
Length = 962
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 274/825 (33%), Positives = 417/825 (50%), Gaps = 102/825 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R++FLD+F GHT V SS +VP D ++ F N+GM Q+K++FLG A R
Sbjct: 17 VRNAFLDFF-KENGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDFATLKR 75
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + + LTK
Sbjct: 76 AHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAISYSWDLLTKV-YG 134
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYF G+ G+ D E +++WL +GV DH+ MK NFWEMG GPCG
Sbjct: 135 LEPDRLYVTYFEGNPDAGIGPDLEAKELWLSVGVAEDHLLSGNMKDNFWEMGEQGPCGPC 194
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIHYD G ++A VN D +++EIWN VFI + R ++ PL +IDTG+G+ER
Sbjct: 195 SEIHYDRIGGRNAAHL-VNQDDPNVLEIWNNVFIQYNREPDRSLRPLPNRHIDTGMGYER 253
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV+ILQNK+S YDTD+F PL + I +++G +PY F + +DT+YR+++D+ R +T
Sbjct: 254 LVSILQNKSSNYDTDVFTPLFDKIREITGCRPYTGKFGEEDTDGIDTAYRVVADHIRTLT 313
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A++D P+ + +R V+R + V+ G ++ + E +GD++PEI+
Sbjct: 314 FAISDGASPNNEGRGYVVRRVLRRGARYARKYLNVEIGSFFSKIVPTLVEQMGDMFPEIR 373
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+ IL EE F K L + + E++ +
Sbjct: 374 RKQTDVMEILDEEEISFA----------KTLDRGERLFEEYALQ---------------- 407
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAA 488
A+ + + G + LYDT+G ++ Q +A + LT+ + FE+ + KE SK +
Sbjct: 408 AKQKGLGNLHGADVWRLYDTFGFPVDLTQLMAEERGLTIDNAEFEEARLKAKEASKGQGK 467
Query: 489 S-------NVPDIDLMD-LKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
V D+ L++ + + P T+D K+ T+ +
Sbjct: 468 QTADVVKLTVHDLGLLETMNNVPKTNDDAKFGRGNITSQIK------------------- 508
Query: 541 FCIDKHAIRHARSGASIDSIQ-LEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
AI H + +DS + + G+I D+TN YA GGQ +D G +
Sbjct: 509 ------AIYHNKK--FVDSTKDIPEGEQFGIILDRTNFYAEQGGQENDTGKIII------ 554
Query: 600 NGKVEIG--ELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+GK E+ ++ G I+H G + SF V + + E D R HT +H+LN
Sbjct: 555 DGKAELAVEDVQVYGGYILHTGFMKYGSFNVNDSVIA--EYDELRRWPIRNNHTGTHILN 612
Query: 657 AALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
ALR+VL QK V +++ DFS + +S + +E+ D I V +
Sbjct: 613 FALRQVLGEGVEQKGSLVAAEKLRFDFS-HKSAVSDSDLEKIERISTDYIRQNCAVYAKD 671
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDK-----ENV-------ISREPCCGTHVFN 763
+ S ++ + + GE YPD V ++ + + +NV IS E C GTHV
Sbjct: 672 VPLSTAREISGVRAVFGETYPDPVRVVSVGVELEEILQNVHDPRWKDISIEFCGGTHVQK 731
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHLS 804
TG I+ ++ G+R I +TG+ + + A E G+ L
Sbjct: 732 TGDIKDLVILEENGIAKGIRRIIAVTGEEAHEVQRIAKEFGERLQ 776
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 39 VPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDFATLKRAHNSQKCIRAGGKHNDLDDVGKD 98
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + + LTK L DRLY T+
Sbjct: 99 SYHHTFFEMLGNWSFGDYFKKEAISYSWDLLTK-VYGLEPDRLYVTY 144
>gi|327349463|gb|EGE78320.1| alanyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
Length = 1088
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 274/825 (33%), Positives = 417/825 (50%), Gaps = 102/825 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R++FLD+F GHT V SS +VP D ++ F N+GM Q+K++FLG A R
Sbjct: 126 VRNAFLDFF-KENGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDFATLKR 184
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + + LTK
Sbjct: 185 AHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAISYSWDLLTKV-YG 243
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYF G+ G+ D E +++WL +GV DH+ MK NFWEMG GPCG
Sbjct: 244 LEPDRLYVTYFEGNPDAGIGPDLEAKELWLSVGVAEDHLLSGNMKDNFWEMGEQGPCGPC 303
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIHYD G ++A VN D +++EIWN VFI + R ++ PL +IDTG+G+ER
Sbjct: 304 SEIHYDRIGGRNAAHL-VNQDDPNVLEIWNNVFIQYNREPDRSLRPLPNRHIDTGMGYER 362
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV+ILQNK+S YDTD+F PL + I +++G +PY F + +DT+YR+++D+ R +T
Sbjct: 363 LVSILQNKSSNYDTDVFTPLFDKIREITGCRPYTGKFGEEDTDGIDTAYRVVADHIRTLT 422
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A++D P+ + +R V+R + V+ G ++ + E +GD++PEI+
Sbjct: 423 FAISDGASPNNEGRGYVVRRVLRRGARYARKYLNVEIGSFFSKIVPTLVEQMGDMFPEIR 482
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+ IL EE F K L + + E++ +
Sbjct: 483 RKQTDVMEILDEEEISFA----------KTLDRGERLFEEYALQ---------------- 516
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAA 488
A+ + + G + LYDT+G ++ Q +A + LT+ + FE+ + KE SK +
Sbjct: 517 AKQKGLGNLHGADVWRLYDTFGFPVDLTQLMAEERGLTIDNAEFEEARLKAKEASKGQGK 576
Query: 489 S-------NVPDIDLMD-LKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
V D+ L++ + + P T+D K+ T+ +
Sbjct: 577 QTADVVKLTVHDLGLLETMNNVPKTNDDAKFGRGNITSQIK------------------- 617
Query: 541 FCIDKHAIRHARSGASIDSIQ-LEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
AI H + +DS + + G+I D+TN YA GGQ +D G +
Sbjct: 618 ------AIYHNKK--FVDSTKDIPEGEQFGIILDRTNFYAEQGGQENDTGKIII------ 663
Query: 600 NGKVEIG--ELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+GK E+ ++ G I+H G + SF V + + E D R HT +H+LN
Sbjct: 664 DGKAELAVEDVQVYGGYILHTGFMKYGSFNVNDSVIA--EYDELRRWPIRNNHTGTHILN 721
Query: 657 AALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
ALR+VL QK V +++ DFS + +S + +E+ D I V +
Sbjct: 722 FALRQVLGEGVEQKGSLVAAEKLRFDFS-HKSAVSDSDLEKIERISTDYIRQNCAVYAKD 780
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDK-----ENV-------ISREPCCGTHVFN 763
+ S ++ + + GE YPD V ++ + + +NV IS E C GTHV
Sbjct: 781 VPLSTAREISGVRAVFGETYPDPVRVVSVGVELEEILQNVHDPRWKDISIEFCGGTHVQK 840
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHLS 804
TG I+ ++ G+R I +TG+ + + A E G+ L
Sbjct: 841 TGDIKDLVILEENGIAKGIRRIIAVTGEEAHEVQRIAKEFGERLQ 885
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 148 VPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDFATLKRAHNSQKCIRAGGKHNDLDDVGKD 207
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + + LTK L DRLY T+
Sbjct: 208 SYHHTFFEMLGNWSFGDYFKKEAISYSWDLLTK-VYGLEPDRLYVTY 253
>gi|320581101|gb|EFW95323.1| Cytoplasmic alanyl-tRNA synthetase [Ogataea parapolymorpha DL-1]
Length = 954
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 273/842 (32%), Positives = 413/842 (49%), Gaps = 96/842 (11%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP---- 66
+ + +R++FLDYF + +GHT V SS ++P+ D ++ F N+GM Q+K +FLG
Sbjct: 4 QWTATKVRNTFLDYFKD-RGHTFVSSSSVIPHDDPTLLFANAGMNQYKPIFLGTVDPSSS 62
Query: 67 -APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
A R NSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A + + + L
Sbjct: 63 FASLKRAVNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIQYSWDLL 122
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
T L DRLY TYF G GL D E + W ++GV DHI K NFWEMG
Sbjct: 123 TNV-YGLNKDRLYVTYFEGDAANGLEPDLEAKQYWKDVGVADDHILPGNAKDNFWEMGDQ 181
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG SEIHYD G ++A + VN D D++EIWN VFI R ++ PL ++DT
Sbjct: 182 GPCGPCSEIHYDRIGGRNAA-SLVNQDDPDVLEIWNNVFIQFNREQDGSLKPLPAKHVDT 240
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV++LQN S YDTD+F PL I++++G +PY F + +DT+YR+L+D
Sbjct: 241 GMGFERLVSVLQNVRSNYDTDVFQPLFSKIQEITGVRPYSGKFGKDDLDGIDTAYRVLAD 300
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R +T ALAD P+ + LR ++R GK +L+ + E + D
Sbjct: 301 HVRTLTFALADGGVPNNEGRGYVLRRILRRGARYVRKYMNYPIGKFFSQLAPTLIEQVKD 360
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
++PE+ + + I IL EE F + L + + EQ+ I+
Sbjct: 361 IFPEVATNTDTIFEILDEEEASFA----------RTLDRGEKLFEQYAII---------- 400
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
++ P T ++G + LYDTYG ++ + +A L + E FE+ E
Sbjct: 401 -----ASKTPEQT-LAGRDVWRLYDTYGFPVDLTRLMAEEAGLNIDEEGFEKARLASLEA 454
Query: 483 SKAKAASNVPDIDLMDL---------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
SKA + + + +D+ K PVTDD YKY + T +VG
Sbjct: 455 SKAGGSKSGKTLLKLDVHILGALDSNKDIPVTDDSYKYGNQ-----------DIKTKIVG 503
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
I G ++ G++ + E +G++ +KT YA GGQ D G +
Sbjct: 504 IYNGKELL------------GSTEGT---EAGQQLGVLLEKTPFYAEQGGQEYDTGKIVI 548
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
+ E+ + S G ++H G+VV K + G D R HT +H
Sbjct: 549 DGVAE----FEVENVQSYAGYVLHTGHVVEG-KFSVGDQVIAGYDELRRWPIRNNHTGTH 603
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
+LN ALR +L QK V +++ DFS ++++ + +E N +I + + V
Sbjct: 604 ILNLALREILGDGVDQKGSLVAAEKLRFDFSNKA-AVTLEQLEKIEAICNKIIKDSMPVY 662
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDIS-DKENVISR-----------EPCCGTH 760
+ + + + L + GE YPD V ++ I E ++++ E C GTH
Sbjct: 663 SKPVALNVAKSIYGLRAVFGETYPDPVRVVSIGVPVEELLAKPDNKEWYDYSVEFCGGTH 722
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIPY 820
V T I+ ++ G+R I +TG + K Q+ + +P+
Sbjct: 723 VAKTSDIKELVIVEESGIAKGIRRIVAVTGTEAHEVQRIAKEFD-----EQLDAIEKMPF 777
Query: 821 GD 822
G+
Sbjct: 778 GE 779
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM Q+K +FLG A R NSQKCIR GGKHNDL GRD
Sbjct: 32 IPHDDPTLLFANAGMNQYKPIFLGTVDPSSSFASLKRAVNSQKCIRAGGKHNDLEDVGRD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + + + LT L DRLY T+
Sbjct: 92 SYHHTFFEMLGNWSFGDYFKKEAIQYSWDLLTN-VYGLNKDRLYVTY 137
>gi|297678244|ref|XP_002816983.1| PREDICTED: alanine--tRNA ligase, mitochondrial [Pongo abelii]
Length = 985
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 275/811 (33%), Positives = 408/811 (50%), Gaps = 86/811 (10%)
Query: 21 FLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANS 75
FL++F + GH LV S+ + P GD S+ FVN+GM QFK +FLG + P A + RVANS
Sbjct: 46 FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105
Query: 76 QKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN-DYYKRDACRMALEFLTKPPVSLPL 134
QKCVR GG HNDL G+D HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P
Sbjct: 106 QKCVRAGGHHNDLEDVGQDLSHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQV-YGIPE 164
Query: 135 DRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEI 194
+RL+ +YF G + GL D ETRDIWL LGVP + G + NFWEMG TGPCG +EI
Sbjct: 165 ERLWVSYFDGDPKAGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPCTEI 224
Query: 195 HYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVT 254
HYD+ G L+E+WN+VF+ H R + ++ PL + ++DTG+G ERLV
Sbjct: 225 HYDLAG---------GVGAPQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGLERLVA 275
Query: 255 ILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVAL 314
+LQ K STYDTDLF PLL I++ A PY ++ DT+YR+++D+ R ++V +
Sbjct: 276 VLQGKHSTYDTDLFSPLLNAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCI 335
Query: 315 ADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSI 371
+D +FP + LR ++R A+ S ++ K G + L + E LGD YPE+Q +
Sbjct: 336 SDGVFPGMSGPPLVLRRILRRAVRFSVEILKAPPG-FLGSLVPVVVETLGDAYPELQRNS 394
Query: 372 NKIQLILGEESRIFDNLRKAAVKEWKPLV-KTQPELEQFNIMEEPGLVLGVKYLTKQLAR 430
+I ++ E+ F A+++ + ++ +T L ++ P V L L
Sbjct: 395 AQIANLVSEDEAAF----LASLERGRRIIDRTLRTLGPSDMF--PAEVAWSLSLCGDLGL 448
Query: 431 DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASN 490
+ E+ + D+ GL + L E + + + + K +
Sbjct: 449 PLDMVELMLEEKGVQLDSAGLER-------------LAQEEAQHRARQAEPVKKQGLWLD 495
Query: 491 VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRH 550
V + + + P TDD KY+Y S Y F + ++ Q++ D A+
Sbjct: 496 VHALGELQRQGVPPTDDSPKYNYSLQP-SGSYEFGTCEAQVL------QLYTEDGTAV-- 546
Query: 551 ARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELAS 610
AS+ Q GL+ D+TN YA GGQ D G YL QE+ +
Sbjct: 547 ----ASVGKGQR-----CGLLLDRTNFYAEQGGQASDRG--YLVRAGQEDVLFPVARAQV 595
Query: 611 LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQK 669
G I+H ++ G ++ VD RLGCM HT +HLLN ALR+ L T Q+
Sbjct: 596 CGGFILHEAVAPECLQI--GDQVQLHVDKAWRLGCMAKHTATHLLNWALRQTLGPGTEQQ 653
Query: 670 SCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTV 729
+ ++ LD + L+ + + AVE + + + V +M E+P L
Sbjct: 654 GSHLSPEQLRLDVTTQ-TPLTPEQLRAVENTVQEAVGQDEAV---YM--EEVP-LALTAQ 706
Query: 730 IPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
+PG E+YPD V L S S E CCGTH+ TG + +I
Sbjct: 707 VPGLRSLDEVYPDPVRVVSVGVPVAHALDPASQAALQTSVELCCGTHLLRTGAVGDLVII 766
Query: 774 GYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
G + + G + +TG+ ++ A E G+ L+
Sbjct: 767 GDRQLSKGTTRLLAITGEQAQQARELGQSLA 797
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 75/107 (70%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG + P A + RVANSQKC+R GG HNDL G+D
Sbjct: 66 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGHHNDLEDVGQDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P +RL+ ++
Sbjct: 126 SHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQ-VYGIPEERLWVSY 171
>gi|296420542|ref|XP_002839828.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636034|emb|CAZ84019.1| unnamed protein product [Tuber melanosporum]
Length = 959
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 283/857 (33%), Positives = 433/857 (50%), Gaps = 104/857 (12%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP- 66
S V + +R +F+DYF N GHT V SS +VP D ++ F N+GM Q+K++FLG
Sbjct: 6 STVEWPASLVRKTFIDYFKNN-GHTFVPSSSVVPLSDPTLLFANAGMNQYKSIFLGTVDP 64
Query: 67 ----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMAL 122
A R ANSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A +
Sbjct: 65 SSDFASLKRAANSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAVEYSW 124
Query: 123 EFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEM 182
E LT+ L DRLY TYF G+ + GL D ET+++W +GV +HI MK NFWEM
Sbjct: 125 ELLTEI-YGLDPDRLYVTYFEGNKERGLEPDLETQELWRAVGVADNHILPGNMKDNFWEM 183
Query: 183 GSTGPCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
G GPCG SE+HYD + G +S L VN D ++IEIWN VFI + R ++ L
Sbjct: 184 GDQGPCGPCSEVHYDHIGGRNASHL--VNMDDPNVIEIWNNVFIQYNREPDHSLRSLPNK 241
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
++DTG+GFERLV++LQ+K+S YDTD+F PL + I++++ A+PYG F + +DT+YR
Sbjct: 242 HVDTGMGFERLVSVLQDKSSNYDTDVFSPLFQKIQEITKARPYGGKFGAEDVDGIDTAYR 301
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAE 358
+++D+ R +T A+AD P+ + +R V+R + F+ G+ ++ +
Sbjct: 302 VIADHVRTLTFAIADGGVPNNEGRGYVVRRVLRRGARYARRYFQAPIGEFFSKIVPTLVL 361
Query: 359 ILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
LGDV+PEI+ + ++ IL EE F + L + + + F+
Sbjct: 362 QLGDVFPEIKKKESDVKEILNEEEESFS----------RTLDRGERMFDVFS-------- 403
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
+ A + + + G + LYDT+G ++ + +A L + E FE+ E
Sbjct: 404 --------KRATEHNSKVLKGSDVWRLYDTFGFPVDLTRIMAEENGLEINEEEFERAKAE 455
Query: 479 LKERSKAKAASNVPDIDLMDL-----------KHFPVTDDKYKYDYHYDTNSKRYTFPCL 527
KE SKA+ +S D++L+ L P TDD YK+
Sbjct: 456 SKEASKARKSSG--DVELLKLGVHDLGRLEQMAEVPKTDDVYKFGR-------------- 499
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
N+ G ++ ++C DK + R + + S +GLI DKTN YA GGQ D
Sbjct: 500 -GNITGHIMA--IYC-DK-SFRSSTANIS-------RYTQLGLILDKTNFYAEQGGQEYD 547
Query: 588 IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMR 647
G + + +++ + G ++H G + ++ G E D R
Sbjct: 548 TGKILIDGEAE----LDVQNVQVYGGYVLHTG-YIKYGTLSVGDDVICEYDELRRWPIRN 602
Query: 648 AHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIA 706
HT +H+LN ALR VL QK V +++ DFS + ++ + +EK + I
Sbjct: 603 NHTGTHVLNYALREVLGDGIEQKGSLVAAEKLRFDFS-HKCGVTDAELEMIEKISTEYIR 661
Query: 707 NQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILI-----------DISDKE-NVISRE 754
++V + S + + + GE YPD V ++ D+ +K+ +S E
Sbjct: 662 QNLEVYSEDVPLSIAREIEGVRAVFGETYPDPVRVVSVGVPIEELTRDVKNKQWRKVSIE 721
Query: 755 PCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILN 814
C GTHV T I+ ++ G+R I +TG+ + GK A+ F + +N
Sbjct: 722 FCGGTHVQKTDDIKDLIILEENGIAKGIRRIVAVTGNDA------GKVQKIASQFEERIN 775
Query: 815 -VGNIPYGDDSIAFVNS 830
+G +P G A + S
Sbjct: 776 ALGKLPAGPRKEAEIKS 792
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R ANSQKCIR GGKHNDL G+D
Sbjct: 37 VPLSDPTLLFANAGMNQYKSIFLGTVDPSSDFASLKRAANSQKCIRAGGKHNDLDDVGKD 96
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LT+ L DRLY T+
Sbjct: 97 SYHHTFFEMLGNWSFGDYFKKEAVEYSWELLTE-IYGLDPDRLYVTY 142
>gi|261203393|ref|XP_002628910.1| alanyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
gi|239586695|gb|EEQ69338.1| alanyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
Length = 962
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 274/825 (33%), Positives = 417/825 (50%), Gaps = 102/825 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R++FLD+F GHT V SS +VP D ++ F N+GM Q+K++FLG A R
Sbjct: 17 VRNAFLDFF-KENGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDFATLKR 75
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + + LTK
Sbjct: 76 AHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAISYSWDLLTKV-YG 134
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYF G+ G+ D E +++WL +GV DH+ MK NFWEMG GPCG
Sbjct: 135 LEPDRLYVTYFEGNPDAGIGPDLEAKELWLSVGVAEDHLLSGNMKDNFWEMGEQGPCGPC 194
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIHYD G ++A VN D +++EIWN VFI + R ++ PL +IDTG+G+ER
Sbjct: 195 SEIHYDRIGGRNAAHL-VNQDDPNVLEIWNNVFIQYNREPDRSLRPLPNRHIDTGMGYER 253
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV+ILQNK+S YDTD+F PL + I +++G +PY F + +DT+YR+++D+ R +T
Sbjct: 254 LVSILQNKSSNYDTDVFTPLFDKIREITGCRPYTGKFGEEDTDGIDTAYRVVADHIRTLT 313
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A++D P+ + +R V+R + V+ G ++ + E +GD++PEI+
Sbjct: 314 FAISDGASPNNEGRGYVVRRVLRRGARYARKYLNVEIGSFFSKIVPTLVEQMGDMFPEIR 373
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+ IL EE F K L + + E++ +
Sbjct: 374 RKQTDVMEILDEEEISFA----------KTLDRGERLFEEYALQ---------------- 407
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAA 488
A+ + + G + LYDT+G ++ Q +A + LT+ + FE+ + KE SK +
Sbjct: 408 AKQKGLGNLHGADVWRLYDTFGFPVDLTQLMAEERGLTIDNAEFEEARLKAKEASKGQGK 467
Query: 489 S-------NVPDIDLMD-LKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
V D+ L++ + + P T+D K+ T+ +
Sbjct: 468 QTADVVKLTVHDLGLLETMDNVPKTNDDAKFGRGNITSQIK------------------- 508
Query: 541 FCIDKHAIRHARSGASIDSIQ-LEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
AI H + +DS + + G+I D+TN YA GGQ +D G +
Sbjct: 509 ------AIYHNKK--FVDSTKDIPEGEQFGIILDRTNFYAEQGGQENDTGKIII------ 554
Query: 600 NGKVEIG--ELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+GK E+ ++ G I+H G + SF V + + E D R HT +H+LN
Sbjct: 555 DGKAELAVEDVQVYGGYILHTGFMKYGSFNVNDSVIA--EYDELRRWPIRNNHTGTHILN 612
Query: 657 AALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
ALR+VL QK V +++ DFS + +S + +E+ D I V +
Sbjct: 613 FALRQVLGEGVEQKGSLVAAEKLRFDFS-HKSAVSDSDLEKIERISTDYIRQNCAVYAKD 671
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDK-----ENV-------ISREPCCGTHVFN 763
+ S ++ + + GE YPD V ++ + + +NV IS E C GTHV
Sbjct: 672 VPLSTAREISGVRAVFGETYPDPVRVVSVGVELEEILQNVHDPRWKDISIEFCGGTHVQK 731
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHLS 804
TG I+ ++ G+R I +TG+ + + A E G+ L
Sbjct: 732 TGDIKDLVILEENGIAKGIRRIIAVTGEEAHEVQRIAKEFGERLQ 776
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 39 VPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDFATLKRAHNSQKCIRAGGKHNDLDDVGKD 98
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + + LTK L DRLY T+
Sbjct: 99 SYHHTFFEMLGNWSFGDYFKKEAISYSWDLLTK-VYGLEPDRLYVTY 144
>gi|384491657|gb|EIE82853.1| alanyl-tRNA synthetase [Rhizopus delemar RA 99-880]
Length = 955
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 275/814 (33%), Positives = 401/814 (49%), Gaps = 91/814 (11%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----AP 68
+ +RS+F+ +F + GH V SS +P+ D ++ F N+GM QFK +FLG L P A
Sbjct: 6 ANKVRSTFVKFFEDN-GHVFVPSSSTIPHDDPTLLFANAGMNQFKPMFLGTLDPNSPLAN 64
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A + EFLTK
Sbjct: 65 VKRACNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEATKFGWEFLTKV 124
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
++LP DRLY TYFGG ++ GLP D E + +W++LGV + +K NFWEMG TGPC
Sbjct: 125 -INLPEDRLYVTYFGGDEKMGLPADLEAKQLWMDLGVEEKRLIPGNVKDNFWEMGETGPC 183
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G SEIHYD G +A + VN D +++EIWN+VF+ R + ++ PL +IDTGLG
Sbjct: 184 GPCSEIHYDRIGGRDAA-SLVNMDDPNVLEIWNLVFMQFNREADGSLRPLPNQHIDTGLG 242
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
ERLV+ILQNK S YDTD+F P+ + I++++GA+ Y + +DT+YR++ D+ R
Sbjct: 243 LERLVSILQNKYSNYDTDVFTPMFDKIKELTGARDYTGKLGEEDVDGVDTAYRVIGDHIR 302
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
+T A++D P + LR ++R + F V G L + + + YP
Sbjct: 303 TLTFAISDGGVPSNEGRGYVLRRILRRGARYARKYFNVAIGSFFSSLVDTLISQMHEAYP 362
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E+ N I+ IL EE F K L + + E Y+
Sbjct: 363 ELGKKANDIKAILDEEEVAFS----------KTLDRGEKLFEA--------------YMK 398
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK- 484
K ++ T +SGD + LYDTYG ++ + +A L + FE K +S+
Sbjct: 399 K--TKESGSTVLSGDDVWRLYDTYGFPVDLTRIMAEENGLEVNEAQFEAAQEAAKNKSRK 456
Query: 485 ---AKAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
V +D+ DL P TDD KY L G +
Sbjct: 457 VKGGDLGQGVVALDVHDLGALDNDDCVPKTDDSAKY-------------------LPGNI 497
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
G +H + + ++ + GL+ DKTN YA +GGQ DIG
Sbjct: 498 QGKVKAIFFEHKFLKS-------TTEIPEDRNFGLLLDKTNFYAESGGQEFDIGSII--- 547
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T N + + + G ++H G++ +++ V D R HT +H+L
Sbjct: 548 TLDGNSEFAVQDCQLYGGYVLHVGHLKYG-QLSIDEDVEVSYDDTRRSPLRNNHTATHIL 606
Query: 656 NAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
N ALR VL QK V ++ DFS Y ++ +A +E ND I QV +
Sbjct: 607 NFALREVLQDDIDQKGSLVAPEKFRFDFS-YKSPVNTKQLAEIENITNDFINKNHQVYSK 665
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISR------------EPCCGTHVF 762
+ + + L + GE YPD V ++ I + I++ E C GTHV
Sbjct: 666 EVPLAVAKAIHGLRAVFGETYPDPVRVVSIGFDVDEITKDVSNPLWKTSSVEFCGGTHVA 725
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
TG I+ +I G+R I LTG+++ A
Sbjct: 726 KTGDIKHFVIIEESGIAKGIRRIVALTGEAAVKA 759
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 77/107 (71%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG L P A R NSQKCIR GGKHNDL G+D
Sbjct: 31 IPHDDPTLLFANAGMNQFKPMFLGTLDPNSPLANVKRACNSQKCIRAGGKHNDLDDVGKD 90
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A + EFLTK ++LP DRLY T+
Sbjct: 91 TYHHTFFEMLGNWSFGDYFKKEATKFGWEFLTK-VINLPEDRLYVTY 136
>gi|321260042|ref|XP_003194741.1| alanine-tRNA ligase [Cryptococcus gattii WM276]
gi|317461213|gb|ADV22954.1| Alanine-tRNA ligase, putative [Cryptococcus gattii WM276]
Length = 1012
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 284/811 (35%), Positives = 411/811 (50%), Gaps = 96/811 (11%)
Query: 14 SKSIRSSFLDYFCNTQG--HTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
+ +R +F+DYF N G HT SS ++P+ DD++ F N+GM Q+K +FLG T P
Sbjct: 62 AAKVRQTFIDYFVNQPGFEHTFWPSSGVIPFDDDTLLFANAGMNQYKPLFLG-TADPKSE 120
Query: 71 -----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
R ANSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K A MA + L
Sbjct: 121 LSKLIRAANSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKLGALTMAWDLL 180
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
T+ LP DRLY TYF G + GL D E + IW +LGVP HI K NFWEMG+T
Sbjct: 181 TRV-YGLPKDRLYVTYFEGDAKQGLEPDSEAQQIWRDLGVPESHILPGNAKDNFWEMGAT 239
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG SEIH+D G +A VNAD +++EIWN VFI + R + + L ++DT
Sbjct: 240 GPCGPCSEIHFDRIGGREAA-HLVNADDPNVLEIWNNVFIQYNREPSGELRTLPAKHVDT 298
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV++L N +S YDTD+F P+ I++++GA+PY ++ +DT+YR+++D
Sbjct: 299 GMGFERLVSVLHNVSSNYDTDVFTPIFSKIQELTGARPYEGKLGDEDKDGIDTAYRVIAD 358
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R +T+A++D PD + LR V+R + + + F VK G L + E LG
Sbjct: 359 HIRTLTIAISDGGIPDKDGRGYVLRRVLRRGVRYASNKFGVKIGTFFSSLVPTVVESLGP 418
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
++PE+ I ++ IL EE F + L + G L K
Sbjct: 419 IFPEVTKKIPELIEILNEEEASFA----------RTLTR--------------GEALFNK 454
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
Y T +A ++ +SG + LYDTYG ++ Q +A + L + EAFE+ E E
Sbjct: 455 YATTAIAEKRTV--LSGKDIWRLYDTYGFPVDLTQIMAEERGLKIDQEAFEKARLESLEA 512
Query: 483 SKA----KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
SKA KA + V +D+ DL P TDD +KY+ S + +
Sbjct: 513 SKAGGKEKAGAQV-KLDVHDLAALEANDAVPKTDDSFKYNLDDIKASVKSIY-------- 563
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
H + S + +L N G++ D+TN YA +GGQ D GV
Sbjct: 564 -------------HNSKFLNS-----TSELPPNTTFGILLDRTNFYAESGGQEYDTGVIA 605
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+ + + ++ ++ G ++H G + ++ G D R HT +
Sbjct: 606 IDDKAE----FKVEDVQVYNGYVLHIGRMEEG-EIEVGDEVICTYDELRRWPIRNNHTGT 660
Query: 653 HLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
H+LN ALR VL QK V + DFS +G++++V + +E ND I V V
Sbjct: 661 HILNFALREVLGDHIDQKGSLVAPTKLRFDFS-HGKSIAVPELIKIEAICNDWIKKGVPV 719
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISR------------EPCCGT 759
+ M +E + L + GE YPD V ++ + IS+ E C GT
Sbjct: 720 YAKDMPLAEAYKIPGLRAVFGEAYPDPVRVVCLGYPLEEISKNVEDARWRQTSIEFCGGT 779
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
HV T I+ +I S G+R I +TG
Sbjct: 780 HVAKTDDIKDFVIIEESSIAKGIRRIVAVTG 810
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 75/110 (68%), Gaps = 8/110 (7%)
Query: 816 GNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP------RVANSQKCIRVGGKHNDLSFA 869
G IP+ DD++ F N+GM Q+K +FLG T P R ANSQKCIR GGKHNDL
Sbjct: 88 GVIPFDDDTLLFANAGMNQYKPLFLG-TADPKSELSKLIRAANSQKCIRAGGKHNDLDDV 146
Query: 870 GRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
G+D+YHHTFFEMLGNWSF DY+K A MA + LT+ LP DRLY T+
Sbjct: 147 GKDTYHHTFFEMLGNWSFGDYFKLGALTMAWDLLTR-VYGLPKDRLYVTY 195
>gi|297737925|emb|CBI27126.3| unnamed protein product [Vitis vinifera]
Length = 1026
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 279/869 (32%), Positives = 431/869 (49%), Gaps = 113/869 (13%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP- 66
S V + +R +F+++F ++ H KSSP+VP D ++ F N+GM QFK +FLG
Sbjct: 7 SEVEWPANKVRDTFINFF-ESKNHVDWKSSPVVPVNDPTLLFANAGMNQFKPIFLGTADP 65
Query: 67 ----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMAL 122
+ R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A A
Sbjct: 66 NTALSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEWAW 125
Query: 123 EFLTKPP---VSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNF 179
E LTK LP DR+Y TYFGG ++ GL D E RD+WL+ +P H+ G K NF
Sbjct: 126 ELLTKAKNLVYKLPTDRIYATYFGGDEKSGLSPDTEARDMWLKF-LPPGHVLPFGCKDNF 184
Query: 180 WEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLS 239
WEMG TGPCG +EIH+D G +A + VN D IEIWN+VFI R S ++ L
Sbjct: 185 WEMGDTGPCGPCTEIHFDRIGNRDAA-SLVNNDDPTCIEIWNLVFIQFNRESDGSLKSLP 243
Query: 240 KNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTS 299
++DTG+GFERL +ILQ K S YDTD+FLP+ + I++ +GA+PY + + +D +
Sbjct: 244 AKHVDTGMGFERLTSILQGKMSNYDTDVFLPIFDAIQQATGARPYSGKVGSDDADKVDMA 303
Query: 300 YRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNI 356
YR+++D+ R ++ A+AD P + LR ++R A+ +V K ++G +
Sbjct: 304 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQEG-FFNSFVNIV 362
Query: 357 AEILGDVYPEIQDSINKIQLILGEESRIF--------DNLRKAAVKEWKPLVKTQP--EL 406
+++GDV+PE++ I+ I+ EE F + +KAA + ++ Q +
Sbjct: 363 VKVMGDVFPELKQREVHIREIIAEEEASFGKTLLKGIEKFKKAAQEVQGKILNGQEFYNI 422
Query: 407 EQF-----------NIMEEPGLVLGVKYL---TKQLARDPSITEISGDM----------- 441
+ F N +E L +G + + ++ I + D+
Sbjct: 423 QVFTNFIHDSQKCCNHFKEIFLWVGGAFWPSGSVEVVHFSDILMLFQDVEDGNKLVSLMI 482
Query: 442 ---AFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS-----KAKAASNVPD 493
AF L+DTYG ++ Q +A + L + + F L+E +ERS K + V D
Sbjct: 483 IKDAFVLWDTYGFPLDLTQLMAEERGLIVDVQGFNAALDEARERSRSAQNKQAGGTIVMD 542
Query: 494 IDLMDLKH---FPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRH 550
D H TDD +K+ + D S I+
Sbjct: 543 ADATSALHKRGVAPTDDSFKFTWFQDHGS---------------------------VIKA 575
Query: 551 ARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELAS 610
SG+ N VG++ + T+ YA GGQI D G L T+ G ++ +
Sbjct: 576 IYSGSEFLESASAGNE-VGIVLETTSFYAEQGGQIFDTG--SLEGTS---GSFQVCNVQI 629
Query: 611 LEGKIVHFGNVVSS---FKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCT 666
G I+H G+ + F V + +V+ D R + HT +H+LN ALR VL
Sbjct: 630 YGGFILHIGSFTEASGRFSVGDKVICKVDYDRRKVIAP--NHTCTHMLNFALREVLGNHV 687
Query: 667 YQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTH 726
QK V ++ DFS +G+ + D + +E +N+ I ++ V + ++ +
Sbjct: 688 DQKGSIVLPEKLRFDFS-HGKPVHPDHLRKIESIVNEQIDAELDVFSKDASLADAKSING 746
Query: 727 LTVIPGEIYPDDVILIDISDK-ENV-----------ISREPCCGTHVFNTGHIESCTVIG 774
L + GE+YPD V ++ I K E++ IS E C GTH+ NT ++ ++
Sbjct: 747 LRAVFGEVYPDPVRVVSIGQKVEDLLADPGNEKWLSISAELCGGTHISNTREAKAFALLS 806
Query: 775 YKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ G+R I +T D + A+E + L
Sbjct: 807 EEGIAKGIRRITAVTTDVAFKAIELARSL 835
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 71/110 (64%), Gaps = 8/110 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK +FLG + R N+QKCIR GGKHNDL G+D
Sbjct: 38 VPVNDPTLLFANAGMNQFKPIFLGTADPNTALSKLTRACNTQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP---VSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A A E LTK LP DR+Y T+
Sbjct: 98 TYHHTFFEMLGNWSFGDYFKKEAIEWAWELLTKAKNLVYKLPTDRIYATY 147
>gi|449299241|gb|EMC95255.1| hypothetical protein BAUCODRAFT_25335 [Baudoinia compniacensis UAMH
10762]
Length = 1306
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 283/838 (33%), Positives = 415/838 (49%), Gaps = 107/838 (12%)
Query: 7 SSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP 66
S+++ + +++ D + +GHT V SS +VP D ++ F N+GM Q+K++FLG
Sbjct: 18 SAFIETLRWNTKANHDDSYFKDRGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFLGTVD 77
Query: 67 -----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMA 121
A R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A M+
Sbjct: 78 PDSDFAKLKRAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEMS 137
Query: 122 LEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWE 181
E LTK L DRLY TYF G GL DEE R W +GV DHI MK NFWE
Sbjct: 138 WELLTKV-FGLDPDRLYVTYFEGKSDAGLEPDEEARKYWKAVGVADDHILTGNMKDNFWE 196
Query: 182 MGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
MG GPCG SEIHYD G ++A VN D +++EIWN VFI + R ++ PL
Sbjct: 197 MGDQGPCGPCSEIHYDRIGGRNAAHL-VNQDDPNVLEIWNNVFIQYNREPDRSLRPLPNK 255
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
++DTGLGFERLV++LQNK S YDTD+F PL +TI++V+GA+ Y F + +DT+YR
Sbjct: 256 HVDTGLGFERLVSVLQNKMSNYDTDVFTPLFKTIQEVTGAREYRGKFGDEDVDGIDTAYR 315
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAE 358
+++D+ R +T A++D P+ + +R V+R + F V G ++ +
Sbjct: 316 VIADHVRTLTFAISDGGVPNNVGRGYVVRRVLRRGARYARKYFDVTIGDFFAKIVPTLVA 375
Query: 359 ILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
+G+++PEI+ + + IL EE F K L + + E+F
Sbjct: 376 QMGEMFPEIKAKQSDVVQILDEEEVSFA----------KTLDRGESMFERF--------- 416
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
Q + E+SG + LYDTYG ++ + +A + L + +A + +
Sbjct: 417 -------AQQCKKTDAKELSGADVWRLYDTYGFPVDLTKLMAEERGLDIDDKAVAEAQEK 469
Query: 479 LKERSKA--KAAS-----NVPDIDLMD-LKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
+E SK KAA+ NV DI+ ++ + P TDD K+ N
Sbjct: 470 AREASKGEKKAAADLLKLNVHDINALEQMPDVPKTDDSPKFQRE---------------N 514
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSI-QLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
+ G++ V G +DS ++ + +GLI D+T+ YA GGQ +D G
Sbjct: 515 VHGVIRAIYV------------GGKFVDSTKEISESDQIGLILDRTSFYAEQGGQENDTG 562
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRA 648
+ + +++ + G ++H G + SFKV G + D R
Sbjct: 563 RILIDGEAE----IDVQNVQVYAGYVMHTGFMNYGSFKV--GDEVLCDYDELRRQPIRNN 616
Query: 649 HTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
HT +H+LN ALR VL Q+ V ++ DFS + S + + +E I
Sbjct: 617 HTGTHILNFALREVLGDEVNQRGSLVAPEKLRFDFS-HKAGCSDEELVKIEDLSTSYIRQ 675
Query: 708 QVQVDRRHMRASELPFLTHLTV-----IPGEIYPDDV-----------ILIDISDKE-NV 750
+V ASE+P T + + GE YPD V +L D+ KE
Sbjct: 676 NSEV-----YASEVPLATARNIEGVRAVFGETYPDPVRVVSIGVPVEELLEDVKRKEWRS 730
Query: 751 ISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG----DSSKAAVENGKHLS 804
+S E C GTHV NT I+ ++ G+R I +TG D + A E K +S
Sbjct: 731 VSIEFCGGTHVKNTTEIKELVILEESGIAKGIRRIVAVTGAAAHDVQREASEWDKKIS 788
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 51 VPLSDPTLLFTNAGMNQYKSIFLGTVDPDSDFAKLKRAVNSQKCIRAGGKHNDLDDVGKD 110
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A M+ E LTK L DRLY T+
Sbjct: 111 SYHHTFFEMLGNWSFGDYFKKEAIEMSWELLTK-VFGLDPDRLYVTY 156
>gi|406695477|gb|EKC98782.1| alanine-tRNA ligase [Trichosporon asahii var. asahii CBS 8904]
Length = 1096
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 284/833 (34%), Positives = 404/833 (48%), Gaps = 99/833 (11%)
Query: 14 SKSIRSSFLDYFCNTQG--HTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
+ +RS+F+DYF N G HT SS +P+ DD++ F N+GM Q+K +FLG
Sbjct: 149 AAKVRSTFIDYFVNQPGFEHTFWPSSGSIPFDDDTLLFANAGMNQYKPLFLGTADPKSDL 208
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K A MA + LT
Sbjct: 209 AKLSRAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKLGALTMAWDLLT 268
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ LP DRLY TYF G GL D E + IW +LGVP HI K NFWEMG+TG
Sbjct: 269 RV-YGLPKDRLYVTYFEGDAAQGLEPDLEAKKIWQDLGVPESHILPGNAKDNFWEMGATG 327
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIH+D G +A VN D D++EIWN VFI + R + ++ PL +IDTG
Sbjct: 328 PCGPCSEIHFDRIGGREAA-HLVNMDDPDVLEIWNNVFIQYNRENDGSLRPLPATHIDTG 386
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV++L N +S YDTD+F P+ + I++++GA+PY ++ +DT+YR+++D+
Sbjct: 387 MGFERLVSVLHNVSSNYDTDVFTPIFKRIQELTGARPYEGKLGADDKDGIDTAYRVIADH 446
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R +T+A++D PD + LR ++R + + F + G L E L ++
Sbjct: 447 IRTLTIAISDGGVPDKDGRGYVLRRILRRGVRYANSKFGAEMGTFFSSLVDTTVETLKEI 506
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE+ I +++ IL EE + F K G +L KY
Sbjct: 507 FPEVTKKIPELKEILDEEEQSFARTLKR------------------------GEILFNKY 542
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
A D + ++G + LYDTYG ++ Q +A + L + EAFE+ E E S
Sbjct: 543 AEAAAAGDKT---LAGRDTWRLYDTYGFPVDLTQIMAEERGLKIDEEAFEKARLESLEAS 599
Query: 484 KAKAASNVP---DIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
KA D+ DL P TDD +KY
Sbjct: 600 KAGGKKGAAGGVKFDVHDLGALEANDAVPKTDDDFKYKK--------------------- 638
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
GD I AI H +S + + G++ DKTN YA +GGQ D GV +
Sbjct: 639 --GDISAAI--KAIYH-QSKFYESTKDVPEGEPFGILLDKTNFYAESGGQEYDTGVIAID 693
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
Q KVE ++ G ++H G + K+ + +D R HT +H
Sbjct: 694 G--QAEFKVE--DVQVYNGYVLHVGRLEEGELKLNDEVI--CTIDELRRWPIRNNHTGTH 747
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
+LN ALR VL QK V + DFS + + +S + +E N I + V
Sbjct: 748 ILNFALRDVLGDGIDQKGSLVAPTKLRFDFS-HNKAISPADLKKIEDLCNAEIKKALAVY 806
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDIS------------DKENVISREPCCGTH 760
+ + + + L + GE YPD V ++ I K S E C GTH
Sbjct: 807 SKELPLATAQKIPGLRAVFGERYPDPVRVVSIGFPLEDIEKNIEDPKWATTSIEFCGGTH 866
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTG----DSSKAAVENGKHLSTAASF 809
V T I+ ++ S G+R + +TG D + + E G+ L A+
Sbjct: 867 VAKTDDIKDFVIVEESSIAKGIRRMVAVTGHEAADVQRKSAEFGRKLDRIANM 919
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 74/109 (67%), Gaps = 6/109 (5%)
Query: 816 GNIPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAG 870
G+IP+ DD++ F N+GM Q+K +FLG A R NSQKCIR GGKHNDL G
Sbjct: 175 GSIPFDDDTLLFANAGMNQYKPLFLGTADPKSDLAKLSRAVNSQKCIRAGGKHNDLDDVG 234
Query: 871 RDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+DSYHHTFFEMLGNWSF DY+K A MA + LT+ LP DRLY T+
Sbjct: 235 KDSYHHTFFEMLGNWSFGDYFKLGALTMAWDLLTR-VYGLPKDRLYVTY 282
>gi|344229501|gb|EGV61386.1| hypothetical protein CANTEDRAFT_109802 [Candida tenuis ATCC 10573]
Length = 953
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 271/812 (33%), Positives = 404/812 (49%), Gaps = 94/812 (11%)
Query: 10 VRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP--- 66
+ + +R++FLD+F + + HT V SS +VP+ D ++ F N+GM Q+K +FLG
Sbjct: 7 IEWSASKVRTTFLDFFKDKK-HTFVPSSSVVPHNDPTLLFANAGMNQYKPIFLGTVDPSS 65
Query: 67 --APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEF 124
A R ANSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A +
Sbjct: 66 DFANLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIGFSWNL 125
Query: 125 LTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGS 184
L L DRLY +YFGG ++ GL D + + WL +GV DHI K NFWEMG
Sbjct: 126 LVGT-YGLDKDRLYVSYFGGDEKQGLDPDLDAKQHWLNIGVAEDHILPGDAKDNFWEMGD 184
Query: 185 TGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
GPCG SEIHYD G ++A VN D +++EIWNIVFI + R T+ L +ID
Sbjct: 185 QGPCGPCSEIHYDRIGGRNAA-HLVNMDDPNVLEIWNIVFIQYNREPDSTLRSLPAKHID 243
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
TG+GFERLV+ILQ+K+S YDTD+F P+ + I +++G +PY F T ++ +DT+YR+++
Sbjct: 244 TGMGFERLVSILQDKSSNYDTDVFTPIFDKIREITGVRPYTGKFGTEDKDGIDTAYRVIA 303
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D+ R +T A+ D P+ + LR ++R G ++L+ + E
Sbjct: 304 DHVRTLTFAITDGGVPNNEGRGYVLRRILRRGSRYVRKYMNYPIGTFFQQLAPVVIEQNK 363
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
+++PEI + IL EE F K L + + EQ++I+
Sbjct: 364 EIFPEIAHKSQDLMEILNEEELSFA----------KTLDRGEKLFEQYSII--------- 404
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
++ P T +SG + LYDTYG ++ + +A L++ FE+ E +E
Sbjct: 405 ------ASKTPEQT-LSGKDVWRLYDTYGFPVDLTRLMAEEAGLSIDEVGFEKAKEESRE 457
Query: 482 RSK---AKAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
SK +K+ +++ +D+ L P TDD YKY + +V
Sbjct: 458 ASKGRNSKSGASLVKLDVHALSELDSNDSIPKTDDSYKY-----------GLDNIKAKVV 506
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
I G ++ + + G++ D+T YA GGQ D G
Sbjct: 507 AIYDG----------------AGFVEVVSDTTSKQYGILLDRTPFYAEQGGQEYDTGKFV 550
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHTT 651
+ + N + + G ++H GN+V S KV + + D R HT
Sbjct: 551 IDGQAEFN----VENVQVYAGYVLHTGNLVEGSIKVGDEVIAGY--DELRRWPIRNNHTG 604
Query: 652 SHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ 710
+H+LN ALR VL + QK V ++ DFS + + L + V+ VE N+ I Q
Sbjct: 605 THVLNYALREVLGNSVDQKGSLVAPEKLRFDFS-HKQALKPEEVSKVEDISNEYIKANKQ 663
Query: 711 VDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKENV----ISREPCCG 758
V + + ++ + L + GE YPD V ++ I S+ +N S E C G
Sbjct: 664 VYAKEVSLADAKQIYGLRAVFGETYPDPVRVVSIGKSVDDLLSNPDNKDWYHFSVEFCGG 723
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
THV TG I+ +I G+R I +TG
Sbjct: 724 THVTKTGDIKDLVIIEESGIAKGIRRIVAVTG 755
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 69/107 (64%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG A R ANSQKCIR GGKHNDL GRD
Sbjct: 36 VPHNDPTLLFANAGMNQYKPIFLGTVDPSSDFANLKRAANSQKCIRAGGKHNDLEDVGRD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + L L DRLY ++
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAIGFSWNLLVG-TYGLDKDRLYVSY 141
>gi|401888987|gb|EJT52930.1| alanine-tRNA ligase [Trichosporon asahii var. asahii CBS 2479]
Length = 973
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 286/833 (34%), Positives = 406/833 (48%), Gaps = 99/833 (11%)
Query: 14 SKSIRSSFLDYFCNTQG--HTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
+ +RS+F+DYF N G HT SS +P+ DD++ F N+GM Q+K +FLG
Sbjct: 26 AAKVRSTFIDYFVNQPGFEHTFWPSSGSIPFDDDTLLFANAGMNQYKPLFLGTADPKSDL 85
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K A MA + LT
Sbjct: 86 AKLSRAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKLGALTMAWDLLT 145
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ LP DRLY TYF G GL D E + IW +LGVP HI K NFWEMG+TG
Sbjct: 146 RV-YGLPKDRLYVTYFEGDAAQGLEPDLEAKKIWQDLGVPESHILPGNAKDNFWEMGATG 204
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIH+D G +A VN D D++EIWN VFI + R + ++ PL +IDTG
Sbjct: 205 PCGPCSEIHFDRIGGREAAHL-VNMDDPDVLEIWNNVFIQYNRENDGSLRPLPATHIDTG 263
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV++L N +S YDTD+F P+ + I++++GA+PY ++ +DT+YR+++D+
Sbjct: 264 MGFERLVSVLHNVSSNYDTDVFTPIFKRIQELTGARPYEGKLGADDKDGIDTAYRVIADH 323
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R +T+A++D PD + LR ++R + + F + G L E L ++
Sbjct: 324 IRTLTIAISDGGVPDKDGRGYVLRRILRRGVRYANSKFGAEMGTFFSSLVDTTVETLKEI 383
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE+ I +++ IL EE + F K G +L KY
Sbjct: 384 FPEVTKKIPELKEILDEEEQSFARTLKR------------------------GEILFNKY 419
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
A D + ++G + LYDTYG ++ Q +A + L + EAFE+ E E S
Sbjct: 420 AEAAAAGDKT---LAGRDTWRLYDTYGFPVDLTQIMAEERGLKIDEEAFEKARLESLEAS 476
Query: 484 KAKAASNVP---DIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
KA D+ DL P TDD +KY
Sbjct: 477 KAGGKKGAAGGVKFDVHDLGALEANDAVPKTDDDFKYKK--------------------- 515
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
GD I AI H +S + + G++ DKTN YA +GGQ D GV +
Sbjct: 516 --GDISAAI--KAIYH-QSKFYESTKDVPEGEPFGILLDKTNFYAESGGQEYDTGVIAID 570
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
Q KVE ++ G ++H G + K+ + +D R HT +H
Sbjct: 571 G--QAEFKVE--DVQVYNGYVLHVGRLEEGELKLNDEVI--CTIDELRRWPIRNNHTGTH 624
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
+LN ALR VL QK V + DFS + + +S + +E N I + V
Sbjct: 625 ILNFALRDVLGDGIDQKGSLVAPTKLRFDFS-HNKAISPADLKKIEDLCNAEIKKALAVY 683
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDIS----DKENVI--------SREPCCGTH 760
+ + + + L + GE YPD V ++ I D E I S E C GTH
Sbjct: 684 SKELPLATAQKIPGLRAVFGERYPDPVRVVSIGFPLEDIEKNIEDPKWATTSIEFCGGTH 743
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTG----DSSKAAVENGKHLSTAASF 809
V T I+ ++ S G+R + +TG D + + E G+ L A+
Sbjct: 744 VAKTDDIKDFVIVEESSIAKGIRRMVAVTGHEAADVQRKSAEFGRKLDRIANM 796
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 74/109 (67%), Gaps = 6/109 (5%)
Query: 816 GNIPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAG 870
G+IP+ DD++ F N+GM Q+K +FLG A R NSQKCIR GGKHNDL G
Sbjct: 52 GSIPFDDDTLLFANAGMNQYKPLFLGTADPKSDLAKLSRAVNSQKCIRAGGKHNDLDDVG 111
Query: 871 RDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+DSYHHTFFEMLGNWSF DY+K A MA + LT+ LP DRLY T+
Sbjct: 112 KDSYHHTFFEMLGNWSFGDYFKLGALTMAWDLLTR-VYGLPKDRLYVTY 159
>gi|328353302|emb|CCA39700.1| alanyl-tRNA synthetase [Komagataella pastoris CBS 7435]
Length = 959
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 275/837 (32%), Positives = 402/837 (48%), Gaps = 105/837 (12%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
+ +RS+F D+F ++ HT V SS ++PY D ++ F N+GM Q+K +FLG A
Sbjct: 10 TANKVRSTFFDFF-KSKDHTYVPSSSVIPYDDPTLLFTNAGMNQYKPIFLGTVDPSSDFA 68
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
R NSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A E LTK
Sbjct: 69 TLKRATNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIGYGWELLTK 128
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
L +RLY +YFGG GL D E ++ W LGV DHI ++ NFWEMG GP
Sbjct: 129 V-YGLEKERLYVSYFGGDAGLGLEPDLEAKEYWKALGVAEDHILPGSVEDNFWEMGDQGP 187
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIHYD G ++A + VN D D++EIWNIVFI R + ++ PL +IDTG+
Sbjct: 188 CGPCSEIHYDRIGGRNAA-SLVNQDDPDVLEIWNIVFIQFNREADGSLKPLPSKHIDTGM 246
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV+ILQN S YDTD+F PL I++++G +PY F + +DT+YR+L+D+
Sbjct: 247 GFERLVSILQNVRSNYDTDVFDPLFTKIQEITGVRPYSGHFGKEDMDGIDTAYRVLADHV 306
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T +LAD P+ + LR ++R + GK +L+ + E + + +
Sbjct: 307 RTLTFSLADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGKFFSQLAPALIEQVKETF 366
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ + + I IL EE F + L + + EQ+ I+
Sbjct: 367 PEVDKNFDTIAEILDEEEASFS----------RTLDRGERLFEQYAII------------ 404
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
++ P T ++G + LYDTYG ++ + +A L + E FE +E SK
Sbjct: 405 ---ASKTPEQT-LAGRDVWRLYDTYGFPVDLTRLMAEETGLKIDDEGFEIAKEASREASK 460
Query: 485 AKAASNVPDIDLMDL---------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ ++ +D+ P TDD YKY ++ ++V I
Sbjct: 461 GNGKTQGKELVKLDVHVLGELEKNSEVPKTDDSYKYGTK-----------NIEASIVAIY 509
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
G ++ + ++ + +G++ DKT YA GGQI D G +
Sbjct: 510 NGKELIQ---------------STSEVADDQQLGILLDKTPFYAEQGGQIYDTGKIVIDG 554
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVS-----SFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ N + + S G ++H G V S K+ G D R HT
Sbjct: 555 VAEFN----VENVQSYAGYVLHTGYVEEGVLSVSDKIIAGY------DELRRWPIKNNHT 604
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H+LN ALR VL QK V ++ DFS + + L++ + VE N+VI V
Sbjct: 605 GTHILNFALRDVLGDDVEQKGSLVAPEKLRFDFS-HKKALTLSELQKVEDISNEVIKKNV 663
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CC 757
V + + + L + GE YPD V ++ I + + P C
Sbjct: 664 PVFASDVTLAVGKEINGLRAVFGETYPDPVRVVSIGVPVEELVKNPSNAEWHNASIEFCG 723
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHLSTAASFS 810
GTHV TG I+ +I G+R I +T + + A E L A S
Sbjct: 724 GTHVAKTGDIKDFVIIEESGIAKGIRRIVAVTSTEAHTVQRIAREKNDQLDAIAKMS 780
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM Q+K +FLG A R NSQKCIR GGKHNDL GRD
Sbjct: 36 IPYDDPTLLFTNAGMNQYKPIFLGTVDPSSDFATLKRATNSQKCIRAGGKHNDLEDVGRD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A E LTK L +RLY ++
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAIGYGWELLTK-VYGLEKERLYVSY 141
>gi|452002003|gb|EMD94462.1| hypothetical protein COCHEDRAFT_1131083 [Cochliobolus
heterostrophus C5]
Length = 966
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 274/839 (32%), Positives = 413/839 (49%), Gaps = 102/839 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPR 71
+R +FLDYF +GHT V SS +VP D ++ F N+GM Q+K +F G + P A R
Sbjct: 15 VRQTFLDYF-RERGHTFVPSSSVVPLSDPTLLFTNAGMNQYKAIFQGTIDPSSDFAQLKR 73
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
ANSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A E LTK
Sbjct: 74 AANSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIGFTWELLTKV-YG 132
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ RLY TYF G+D+ L D E +++WL+ GVP DHI MK NFWEMG GPCG
Sbjct: 133 IDPKRLYVTYFEGTDE--LEPDLEAKELWLKAGVPEDHILPGDMKDNFWEMGDQGPCGPC 190
Query: 192 SEIHYDMK----GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SE+HYD++ G+ +A + VN D ++IEIWN VF+ + R ++ PL +IDTG+
Sbjct: 191 SEVHYDLREPENGQYRNAASLVNMDDPEVIEIWNNVFMQYNREPDRSLRPLPNKHIDTGM 250
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G+ERLV++LQ+K S YDTD+F PL I++++GA+ Y F + +DT+YR+++D+
Sbjct: 251 GYERLVSVLQHKKSNYDTDVFTPLFHKIQEITGAREYRGKFGDEDPDGIDTAYRVVADHV 310
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
RM++ A+AD P+ + +R V+R + F G ++ + + +GD++
Sbjct: 311 RMMSFAIADGGVPNNVGRGYVVRRVLRRGARYARKYFACDIGDFFSKIVPTLVDQMGDMF 370
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI+ I IL EE + F K L + + E++
Sbjct: 371 PEIRKKQQDIIEILDEEEKAFA----------KSLDRGETIFEKY--------------- 405
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
Q A+ E+ GD + LYDTYG ++ + +A + L + E E + +E SK
Sbjct: 406 -AQKAKTKGSDELPGDDVWRLYDTYGFPVDLTKLMAEERGLKINDEEVEVAQEKAREASK 464
Query: 485 A--KAASNVPDIDLMDL------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
KAA + D+ DL P TDD K+ N+ ++
Sbjct: 465 GDKKAAGLLVKFDVHDLGALENMPEVPKTDDSPKFGRE---------------NITAVI- 508
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
AI H + + ++ G++ D+TN YA GGQ D G +
Sbjct: 509 ---------KAIYHNKKFLK-STAEVPKGEQFGVLLDRTNFYAEQGGQEFDTGKLLVDGE 558
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+ + I + G ++H G + +++ G E D R HT +H+LN
Sbjct: 559 AE----ISIENVQVYAGYVLHTG-YIKYGELSVGSEVIAEFDELRRHPIRNNHTGTHVLN 613
Query: 657 AALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
ALR VL QK V ++ DFS + LS + VEK + I QV +
Sbjct: 614 YALREVLGNEVDQKGSLVAPEKLRFDFS-HKAGLSDAELDKVEKISSTYIKEDKQVYAKE 672
Query: 716 MRASELPFLTHLTVIPGEIYPD-----------DVILIDISDKE-NVISREPCCGTHVFN 763
+ + + + + GE YPD + +L D+ +++ +S E C GTHV
Sbjct: 673 VPLASAKEIRGVRAVFGETYPDPVRVVSVGVPVEELLKDVKNEQWEKLSIEFCGGTHVLK 732
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQ-ILNVGNIPYG 821
TG I+ ++ G+R I +TG + A F + + +G +P+G
Sbjct: 733 TGEIKDLVILEESGIAKGIRRIVAVTGQEAYNV------QRVAGEFQERVEAMGKMPFG 785
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K +F G + P A R ANSQKCIR GGKHNDL G+D
Sbjct: 37 VPLSDPTLLFTNAGMNQYKAIFQGTIDPSSDFAQLKRAANSQKCIRAGGKHNDLDDVGKD 96
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A E LTK + RLY T+
Sbjct: 97 SYHHTFFEMLGNWSFGDYFKKEAIGFTWELLTK-VYGIDPKRLYVTY 142
>gi|254571161|ref|XP_002492690.1| Cytoplasmic alanyl-tRNA synthetase [Komagataella pastoris GS115]
gi|238032488|emb|CAY70511.1| Cytoplasmic alanyl-tRNA synthetase [Komagataella pastoris GS115]
Length = 981
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 275/837 (32%), Positives = 402/837 (48%), Gaps = 105/837 (12%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
+ +RS+F D+F ++ HT V SS ++PY D ++ F N+GM Q+K +FLG A
Sbjct: 32 TANKVRSTFFDFF-KSKDHTYVPSSSVIPYDDPTLLFTNAGMNQYKPIFLGTVDPSSDFA 90
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
R NSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A E LTK
Sbjct: 91 TLKRATNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIGYGWELLTK 150
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
L +RLY +YFGG GL D E ++ W LGV DHI ++ NFWEMG GP
Sbjct: 151 V-YGLEKERLYVSYFGGDAGLGLEPDLEAKEYWKALGVAEDHILPGSVEDNFWEMGDQGP 209
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIHYD G ++A + VN D D++EIWNIVFI R + ++ PL +IDTG+
Sbjct: 210 CGPCSEIHYDRIGGRNAA-SLVNQDDPDVLEIWNIVFIQFNREADGSLKPLPSKHIDTGM 268
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV+ILQN S YDTD+F PL I++++G +PY F + +DT+YR+L+D+
Sbjct: 269 GFERLVSILQNVRSNYDTDVFDPLFTKIQEITGVRPYSGHFGKEDMDGIDTAYRVLADHV 328
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T +LAD P+ + LR ++R + GK +L+ + E + + +
Sbjct: 329 RTLTFSLADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGKFFSQLAPALIEQVKETF 388
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ + + I IL EE F + L + + EQ+ I+
Sbjct: 389 PEVDKNFDTIAEILDEEEASFS----------RTLDRGERLFEQYAII------------ 426
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
++ P T ++G + LYDTYG ++ + +A L + E FE +E SK
Sbjct: 427 ---ASKTPEQT-LAGRDVWRLYDTYGFPVDLTRLMAEETGLKIDDEGFEIAKEASREASK 482
Query: 485 AKAASNVPDIDLMDL---------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ ++ +D+ P TDD YKY ++ ++V I
Sbjct: 483 GNGKTQGKELVKLDVHVLGELEKNSEVPKTDDSYKYGTK-----------NIEASIVAIY 531
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
G ++ + ++ + +G++ DKT YA GGQI D G +
Sbjct: 532 NGKELIQ---------------STSEVADDQQLGILLDKTPFYAEQGGQIYDTGKIVIDG 576
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVS-----SFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ N + + S G ++H G V S K+ G D R HT
Sbjct: 577 VAEFN----VENVQSYAGYVLHTGYVEEGVLSVSDKIIAGY------DELRRWPIKNNHT 626
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H+LN ALR VL QK V ++ DFS + + L++ + VE N+VI V
Sbjct: 627 GTHILNFALRDVLGDDVEQKGSLVAPEKLRFDFS-HKKALTLSELQKVEDISNEVIKKNV 685
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CC 757
V + + + L + GE YPD V ++ I + + P C
Sbjct: 686 PVFASDVTLAVGKEINGLRAVFGETYPDPVRVVSIGVPVEELVKNPSNAEWHNASIEFCG 745
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHLSTAASFS 810
GTHV TG I+ +I G+R I +T + + A E L A S
Sbjct: 746 GTHVAKTGDIKDFVIIEESGIAKGIRRIVAVTSTEAHTVQRIAREKNDQLDAIAKMS 802
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM Q+K +FLG A R NSQKCIR GGKHNDL GRD
Sbjct: 58 IPYDDPTLLFTNAGMNQYKPIFLGTVDPSSDFATLKRATNSQKCIRAGGKHNDLEDVGRD 117
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A E LTK L +RLY ++
Sbjct: 118 SYHHTFFEMLGNWSFGDYFKKEAIGYGWELLTK-VYGLEKERLYVSY 163
>gi|385304483|gb|EIF48501.1| cytoplasmic alanyl-trna synthetase [Dekkera bruxellensis AWRI1499]
Length = 993
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 272/835 (32%), Positives = 403/835 (48%), Gaps = 88/835 (10%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP--- 70
+ +R +FL++F +GHT V SS ++P+ D ++ F N+GM Q+K +FLG P
Sbjct: 46 ASKVRDTFLNFF-KERGHTFVPSSSVIPHDDPTLLFANAGMNQYKPIFLGTIDPSSPLAH 104
Query: 71 --RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R NSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K A + E LTK
Sbjct: 105 IKRATNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKEGAVGFSWELLTKV 164
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
L RLY TYFGG + GL D ET IW +GV HI K NFWEMG GPC
Sbjct: 165 -YKLDPSRLYVTYFGGDKKAGLQPDLETXKIWENIGVSESHILPGSAKDNFWEMGDQGPC 223
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G SEIHYD G ++A VN D D++EIWN VFI R ++ PL + +IDTG+G
Sbjct: 224 GPCSEIHYDRIGGRNAA-DLVNKDDPDVLEIWNNVFIQFNREQDGSLKPLPQKHIDTGMG 282
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
FERLV+ILQN S YDTD+F PL I++++G + Y F + +DT+YR+L+D+ R
Sbjct: 283 FERLVSILQNVRSNYDTDVFRPLFAKIQEITGXRXYTGKFGKEDVDGIDTAYRVLADHVR 342
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
+T A+AD P+ + LR ++R + GK L+ + E + +++P
Sbjct: 343 TLTFAIADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGKFFSSLAPTLIEQVKNIFP 402
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E+ I I+ EE F + L + + E +
Sbjct: 403 ELTKDPQTIYEIMDEEEASFA----------RTLDRGEKLFESY---------------- 436
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ-KLNELK--ER 482
+ A S +SG + LYDTYG ++ + +A L + E FE+ KL K +
Sbjct: 437 AEKASKTSEKMLSGKDVWRLYDTYGFPVDLTRLMAEEAXLKIDEEGFEKAKLASWKASKS 496
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
+K + +D+ L D + D + +YT ++ ++ I + DQ F
Sbjct: 497 GNSKGGKKLLKLDVHALGDLQSNDKISQTDDQF-----KYTSNDVEADIQAIYV-DQKFV 550
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
++ +G+I KT YA GGQ+ D G + + N
Sbjct: 551 NSTEGLKEGZQ--------------IGIILSKTPFYAEQGGQVXDTGKLVIDGQAEFN-- 594
Query: 603 VEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+ + + G ++H G + S KV G + D R HT +H+LN ALR
Sbjct: 595 --VENVQTYAGYVLHTGYIEEGSLKV--GESVIASYDETRRESLRHNHTGTHILNFALRS 650
Query: 662 VLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL + QK V D+ DFS + + L +D + E+ +N +I + V+V + + E
Sbjct: 651 VLGDSVDQKGSLVAPDKLRFDFS-FKKALKLDQIKKTEEIVNKIIKDDVKVYTKSVPLEE 709
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFNTGHIE 768
+ L + GE YPD V ++ + + + + +P C GTHV + I+
Sbjct: 710 AKKINGLRAVFGESYPDPVRVVSVGNSVDELIADPSNEXWLNXPIEFCGGTHVSRSSDIK 769
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQIL-NVGNIPYGD 822
+ G+R I LTG+ E K + A F +L N+ +P+G+
Sbjct: 770 FLVITEEGGIAKGIRRIXALTGE------EALKTKTVANEFEAVLDNIEKMPFGN 818
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 68/107 (63%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM Q+K +FLG P R NSQKCIR GGKHNDL GRD
Sbjct: 71 IPHDDPTLLFANAGMNQYKPIFLGTIDPSSPLAHIKRATNSQKCIRAGGKHNDLEDVGRD 130
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K A + E LTK L RLY T+
Sbjct: 131 SYHHTFFEMLGNWSFGDYFKEGAVGFSWELLTK-VYKLDPSRLYVTY 176
>gi|170590129|ref|XP_001899825.1| Alanyl-tRNA synthetase [Brugia malayi]
gi|158592744|gb|EDP31341.1| Alanyl-tRNA synthetase, putative [Brugia malayi]
Length = 962
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 272/822 (33%), Positives = 398/822 (48%), Gaps = 90/822 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +R++F+++F + + HT V SS ++P+ D ++ F N+GM Q+K +FLG
Sbjct: 4 LTCDEVRAAFINFFKDRE-HTYVHSSSVIPFDDPTLLFANAGMNQYKPIFLGTVEPSSEM 62
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A R N+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K + C A E LT
Sbjct: 63 AKLKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKLEVCNWAWELLT 122
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K + +P +RLY +YFGG ++ GL DEE R IWL +GVP HI GMK NFWEMG G
Sbjct: 123 KV-LGIPGERLYVSYFGGDEKTGLDADEECRQIWLNIGVPPSHILSFGMKDNFWEMGDVG 181
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G A VNAD ++EIWN+VF+ R ++ L + +ID G
Sbjct: 182 PCGPCSEIHYDRVGN-RDASHLVNADDPMVVEIWNLVFMQFNREEDGSLKQLPRKHIDCG 240
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LGFERLV +LQNK S YDTD+F PL I + +PY + +D +YR+++D+
Sbjct: 241 LGFERLVAVLQNKLSNYDTDIFTPLFXAIHNGTKVRPYSGKVGADDVDGIDMAYRVIADH 300
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R +++AL+D PD T + LR ++R + + + G + L + +LG
Sbjct: 301 IRTLSIALSDGGRPDNTGRGYVLRRILRRGVRYANEKLSAPPG-FLSSLVPTVVNLLGKT 359
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE+ + I+ +E + F +KT L G
Sbjct: 360 FPELHKDPQAVMDIINDEEKQF--------------LKT--------------LSRGRTL 391
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
K +A + GD+A+ LYDTYG ++ Q +A + L + E FE + S
Sbjct: 392 FQKAVAGLQGHNILPGDVAWRLYDTYGFPLDLTQLMAEERGLLVDFEVFENCRQKAAGIS 451
Query: 484 KAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
A A IDL + K P TDD KY Y+ ++ + T + GI++
Sbjct: 452 AAHANKMRDTIDLDVNAISELKNKGIPATDDSPKYKYYALSSEDQQTLYNFE-KCEGIIL 510
Query: 537 G---DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
D++F +D+ L + LI D+TN YA GGQI D GV
Sbjct: 511 ALRKDKIF---------------LDT--LNSGDFGALILDRTNFYAEQGGQIFDTGVLTE 553
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
+ E + + G +V G V V + ++ D R + M+ HT +H
Sbjct: 554 VDKGSE---FIVSNVQIRGGYVVLVGTVEGQLCVGDKVIQAIDEDRRNLI--MKNHTGTH 608
Query: 654 LLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
+LN ALR+V+ QK V D D + + L+ + + VEK +I V
Sbjct: 609 VLNFALRKVIGEVEQKGSLVAPDRLRFDLTAK-QPLTYEQIRMVEKESQMLIDTNATVFA 667
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
+++ +E + L YPD V ++ + SD + E C GTH+
Sbjct: 668 KNVPLAEARQINGLRA----AYPDPVRIVSVGIPIEELLRNKDSDLAVNTAVEFCGGTHL 723
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
N GHI + ++ G+R I LTG + A+ L
Sbjct: 724 HNVGHIGKLVITVEEAIAKGIRRIIALTGPEAFRAIHRADRL 765
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 83/140 (59%), Gaps = 9/140 (6%)
Query: 785 IKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLTP 844
+K LT D +AA N + + + IP+ D ++ F N+GM Q+K +FLG
Sbjct: 1 MKALTCDEVRAAFIN---FFKDREHTYVHSSSVIPFDDPTLLFANAGMNQYKPIFLGTVE 57
Query: 845 -----APYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMA 899
A R N+QKCIR GGKHNDL G+D YHHTFFEMLGNWSF DY+K + C A
Sbjct: 58 PSSEMAKLKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKLEVCNWA 117
Query: 900 LEFLTKPPVSLPLDRLYFTF 919
E LTK + +P +RLY ++
Sbjct: 118 WELLTK-VLGIPGERLYVSY 136
>gi|413916474|gb|AFW56406.1| hypothetical protein ZEAMMB73_266824 [Zea mays]
Length = 1002
Score = 411 bits (1056), Expect = e-111, Method: Compositional matrix adjust.
Identities = 269/810 (33%), Positives = 408/810 (50%), Gaps = 83/810 (10%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP--- 70
S+ IR FL +F ++ HT SSP+VP D ++ F N+GM QFK VFLG P
Sbjct: 57 SRRIRQEFLTFF-ESKAHTRWPSSPVVPVDDPTLLFANAGMNQFKPVFLGTAAPDSPLGR 115
Query: 71 --RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R N+QKC+R GGKHNDL G D+YHHTFFEMLGNWSF DY+K +A R A E LT+
Sbjct: 116 LHRACNTQKCIRAGGKHNDLDDVGNDTYHHTFFEMLGNWSFGDYFKEEAIRWAWELLTQ- 174
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
LP DR+Y TYFGG + GL D+E++DIWL+ +P++ + G K NFWEMG TGPC
Sbjct: 175 VYKLPTDRIYATYFGGDVKSGLGADDESKDIWLKY-LPKEKVLPFGCKDNFWEMGDTGPC 233
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G +EIH+D G +A + VN D IEIWN+VFI R + T+ PL ++DTGLG
Sbjct: 234 GPCTEIHFDRIGNRDAA-SLVNNDDPTCIEIWNLVFIQFNREADGTLRPLPAKHVDTGLG 292
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVS--GAKPYGRTFTTSNRTDLDTSYRMLSDY 306
FERL +ILQNK S YDTD+F+P+ + I +++ G +PY + + +D +YR+++D+
Sbjct: 293 FERLTSILQNKMSNYDTDIFMPIFDAIHQLAGDGIQPYSGKLGSDDIGKVDMAYRVVADH 352
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R ++ A+AD P + LR ++R A+ K KQ L +++GDV
Sbjct: 353 IRTLSFAIADGSQPGNEGREYVLRRILRRAVHFGHQKLKAKQ-SFFSSLVNVFVQLMGDV 411
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++D+ KI+ I+ +E F+N +++K
Sbjct: 412 FPELKDNEKKIKCIIRDEEESFENTLAKGYEKFKKAADA--------------------- 450
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
+D T +SG AF L+DTYG ++ + +A LT+ + F + E ++++
Sbjct: 451 -----VKDNGGTILSGQDAFILWDTYGYPIDLTEVMAIDYGLTVDKKGFNASMEEARQKA 505
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV-GIVIGDQVFC 542
+ + + MD T K +S ++ +P ++V I G +
Sbjct: 506 RNARNKSGGNSIAMDAN---ATAQLRKLGLASTDDSPKFLWPKEHESVVKAIYTGSEYI- 561
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
+ A+ D GL+ + T+ YA GGQI D G + G
Sbjct: 562 ----------TTATGDGD-------FGLVLESTSFYAEQGGQIFDTG-----SIEGSFGT 599
Query: 603 VEIGELASLEGKIVHFGNVVSSFKV-TPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+ + G ++H G+ KV + G + +VD R HT +H+LN ALR
Sbjct: 600 FNVNNVQVFAGYVLHIGSFTKGSKVLSLGDSVICKVDYNRRTLIAPNHTCTHMLNFALRE 659
Query: 662 VL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL QK V ++ DFS +G+ + + + +E +N I +++ V ++ +
Sbjct: 660 VLGDHVDQKGSIVLPEKLRFDFS-HGKPVQPEDLRKIEFIVNQQIKDELGVYALEIKLED 718
Query: 721 LPFLTHLTVIPGEIYPDDV-----------ILIDISDKENV-ISREPCCGTHVFNTGHIE 768
+ L + GEIYPD V +L D KE + IS E C GTH+ NT +
Sbjct: 719 AKRINGLRAVFGEIYPDPVRVVSVGRKVEDLLADPDSKEWLSISTELCGGTHITNTRDAK 778
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
+ ++ + GVR I +T + A+E
Sbjct: 779 AFALLSEEGIAKGVRRITAVTAGCATQAME 808
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK VFLG P R N+QKCIR GGKHNDL G D
Sbjct: 82 VPVDDPTLLFANAGMNQFKPVFLGTAAPDSPLGRLHRACNTQKCIRAGGKHNDLDDVGND 141
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K +A R A E LT+ LP DR+Y T+
Sbjct: 142 TYHHTFFEMLGNWSFGDYFKEEAIRWAWELLTQ-VYKLPTDRIYATY 187
>gi|336371860|gb|EGO00200.1| hypothetical protein SERLA73DRAFT_107224 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384611|gb|EGO25759.1| hypothetical protein SERLADRAFT_361256 [Serpula lacrymans var.
lacrymans S7.9]
Length = 956
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 267/809 (33%), Positives = 397/809 (49%), Gaps = 79/809 (9%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
+ +R F +YF ++GHT V SS +PY D ++ F N+GM Q+K++FLG A
Sbjct: 10 TAHKVRDEFFNYF-RSKGHTFVPSSATIPYEDPTLLFANAGMNQYKSIFLGTVDPNSDMA 68
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + E LT+
Sbjct: 69 KLKRAFNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEYSWELLTE 128
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
LP DRLY TYF G + GL DEE R W + GV DHI K NFWEMG+TGP
Sbjct: 129 V-YGLPKDRLYVTYFEGDSKNGLQADEEARQYWRDRGVAEDHILPGNAKDNFWEMGATGP 187
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIH+D G ++A VN D D++EIWN VFI R ++ L ++DTG+
Sbjct: 188 CGPCSEIHFDRIGGRNAAHL-VNQDDPDVLEIWNNVFIQFNREEDGSLKSLPSKHVDTGM 246
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV+++Q+K S YDTD+F P+ + I++++G +PY F + +DT+YR+++D+
Sbjct: 247 GFERLVSVVQDKRSNYDTDVFTPIFDKIQELTGVRPYAGKFGDEDADGIDTAYRVVADHV 306
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++ AL+D P+ + LR ++R + V G L + E +GDV+
Sbjct: 307 RTLSFALSDGGVPNNVGRGYVLRRILRRGSRYARKKLNVPIGSFFSSLMPVVVETMGDVF 366
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ +++I+ IL EE E F+ + G L +Y
Sbjct: 367 PELTKKVDEIKEILDEEE------------------------ESFSRTLDRGEKLFDQYA 402
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
++ A+ S E++G + LYDTYG ++ + +A L + + FE+ K+ SK
Sbjct: 403 SR--AQQQSTKELNGKDVWRLYDTYGFPVDLTRLMAEELHLGINDKEFEEAQEASKQASK 460
Query: 485 A---KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
K + V +D+ D+ D K D +S ++ + + GI F
Sbjct: 461 GTLKKDSHPVIKLDVHDIAALEKNDAIPKTD-----DSAKFQLGNIMAQVKGIYYNKNFF 515
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
S +SI + G++ D+T+ YA +GGQ D G + +
Sbjct: 516 ----------ESTSSI-----PEDTTFGVLLDRTSFYAESGGQEYDTGNIVIDGVSD--- 557
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
E+ + S G ++H G++ K+ G D R HT +H+LN LR
Sbjct: 558 -FEVTNVQSFNGYVLHIGHLKYG-KLDIGDEVVSSYDELRRWPLRSNHTATHILNFGLRE 615
Query: 662 VLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL QK V + DFS + +S+ + +E D I V+V + +
Sbjct: 616 VLGDHIDQKGSLVAPTKLRFDFS-HKSQISLPELTKIESMSLDWIKKNVKVYSKELDLKS 674
Query: 721 LPFLTHLTVIPGEIYPDDVILI----DISDKENVI--------SREPCCGTHVFNTGHIE 768
+ L + GE YPD V ++ D+ D I S E C GTHV TG I+
Sbjct: 675 AQQIPGLRAVFGESYPDPVRVVTLEFDVDDMAKDIENPKWRNTSVEFCGGTHVAKTGDIK 734
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
+ G+R I +TG + A
Sbjct: 735 DFVITEESGIAKGIRRITAVTGQEAHEAA 763
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 36 IPYEDPTLLFANAGMNQYKSIFLGTVDPNSDMAKLKRAFNSQKCIRAGGKHNDLDDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LT+ LP DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAIEYSWELLTE-VYGLPKDRLYVTY 141
>gi|115490933|ref|XP_001210094.1| alanyl-tRNA synthetase [Aspergillus terreus NIH2624]
gi|114196954|gb|EAU38654.1| alanyl-tRNA synthetase [Aspergillus terreus NIH2624]
Length = 968
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 270/812 (33%), Positives = 407/812 (50%), Gaps = 87/812 (10%)
Query: 13 CSKSIRSSFLDYFCNTQGHTL------------VKSSPIVPYGDDSIAFVNSGMCQFKNV 60
+K +R +FLDYF GHT SSP+VP D ++ F N+GM QFK++
Sbjct: 12 TAKRVRDTFLDYF-KKNGHTFGIATVARSILPSFASSPVVPLADPTLLFTNAGMNQFKSI 70
Query: 61 FLGLTPAPYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
FLG C+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++A R
Sbjct: 71 FLGTVDPNSDFATLKSACIRAGGKHNDLDDVGKDGYHHTFFEMLGNWSFGDYFKKEAIRY 130
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ E LT L RLY TYF G + GL D E +++W +GVP DHI MK NFW
Sbjct: 131 SWELLT-TVYGLDPQRLYVTYFEGHKEGGLEPDLEAKELWKAVGVPDDHILPGNMKDNFW 189
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SE+HYD G ++A VN D +++EIWN VFI + R + ++ PL
Sbjct: 190 EMGDQGPCGPCSEVHYDRIGGRNAAHL-VNMDDPNVLEIWNNVFIQYNREADRSLRPLPN 248
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTGLGFERLV+ILQ+K+S YDTD+F PL + I ++GA+ Y F + +DT+Y
Sbjct: 249 KHIDTGLGFERLVSILQDKSSNYDTDVFTPLFDAIRDITGAREYQGRFGADDVDGIDTAY 308
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+++D+ R + A++D + P+ + +R V+R + F+V+ G +L +
Sbjct: 309 RVVADHIRTLMFAISDGVMPNNDGRGYVIRRVLRRGARYARKYFQVEIGSFFSKLVPTVV 368
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ LGD++PE++ + + IL EE F K L + + + EQ+
Sbjct: 369 DQLGDMFPELKKKQHDVMEILDEEEISFS----------KTLDRGERQFEQY-------- 410
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
Q ++ ++ G + LYDT+G ++ + +A + L + FE+
Sbjct: 411 --------AQKSKTKGDDKLHGADVWRLYDTFGFPVDLTRLMAEERGLRIDDLEFEEARL 462
Query: 478 ELKERSKA--KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
KE SK KAA++ +D+ DL +D +K D +S ++
Sbjct: 463 RAKEASKGQKKAAADAVKLDVHDLGKLEKMEDVHKTD-----DSAKF------------- 504
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
G + AI H +S + S ++ +G+I D+TN YA GGQ +D G +
Sbjct: 505 -GRENITAQVKAIYHGKSFCTSTS-EITAGEQLGIILDRTNFYAEQGGQENDTGRIVIDG 562
Query: 596 TTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+ +E+G++ G ++H G + SF V G + E D R HT +H+
Sbjct: 563 QAE----LEVGDVQLYGGYVLHTGFMKYGSFSV--GDSVICEYDELRRWPIRNNHTGTHI 616
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN ALR VL QK V +++ DFS + L+ + VE + I V
Sbjct: 617 LNFALREVLGDGIEQKGSLVAAEKLRFDFS-HKSPLTDAELQKVEDISTEYIRQNCAVYS 675
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDV-----------ILIDISD-KENVISREPCCGTHV 761
+ + + ++ + + GE YPD V IL ++SD + +S E C GTHV
Sbjct: 676 QELPLATAREISGVRAVFGETYPDPVRVVSVGVELEEILKNVSDPRWEKVSIEFCGGTHV 735
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I+ V+ G+R I +TG+ +
Sbjct: 736 QKTGDIKDLVVLEESGIAKGIRRIIAVTGEEA 767
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK++FLG CIR GGKHNDL G+D YHHT
Sbjct: 50 VPLADPTLLFTNAGMNQFKSIFLGTVDPNSDFATLKSACIRAGGKHNDLDDVGKDGYHHT 109
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+K++A R + E LT L RLY T+
Sbjct: 110 FFEMLGNWSFGDYFKKEAIRYSWELLT-TVYGLDPQRLYVTY 150
>gi|328772364|gb|EGF82402.1| hypothetical protein BATDEDRAFT_32863 [Batrachochytrium
dendrobatidis JAM81]
Length = 965
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 284/822 (34%), Positives = 400/822 (48%), Gaps = 108/822 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R +F+DYF GHT V SS +P+GD ++ F NSGM QFK +FLG A R
Sbjct: 10 VRKTFIDYF-EQHGHTHVVSSSTIPHGDPTLMFANSGMNQFKPIFLGTVDPNSDLARLSR 68
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
ANSQKC+R GGKHNDL GRD+YHHTFFEMLGNWSF +Y+K +A MA E LTK
Sbjct: 69 AANSQKCIRAGGKHNDLEDVGRDTYHHTFFEMLGNWSFGNYFKTEAIEMAWEILTKV-YG 127
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY TYFGG GL D E + +W +GV DHI +K NFWEMG GPCG
Sbjct: 128 LPKDRLYITYFGGDKSLGLESDIEAKHLWRNIGVEEDHIIPGSVKDNFWEMGDQGPCGPC 187
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIH+D G ++A VN D D++EIWN+VF+ + R ++ L +IDTG+G ER
Sbjct: 188 SEIHFDRIGGRNAA-DLVNMDDPDVLEIWNLVFMQYNREVDRSLKLLPNKHIDTGMGLER 246
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV+ILQ+K S YDTD+F + I+K++G + Y +++ +DT+YR+++D+ R +T
Sbjct: 247 LVSILQDKRSNYDTDVFTGIFSAIQKLTGVREYQGRLGEADQDGIDTAYRVIADHVRTLT 306
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A++D P + LR ++R + F V G L + +GD +PEI
Sbjct: 307 FAISDGGVPSNEGRGYVLRRILRRGARYARKKFNVPIGCFFSSLVDTVVTEMGDAFPEIT 366
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+ ++ ++ IL EE R F K L + G L +YL K
Sbjct: 367 ERVDDLKEILDEEERSFS----------KTL--------------DRGERLFGEYLAKTK 402
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA--- 485
A + ISG A+ LYDTYG ++ + +A LT+ FEQ+ KERS+
Sbjct: 403 ASGGKV--ISGADAWRLYDTYGFPVDLTRLMAEENGLTVDEVEFEQEQKIAKERSRGRNE 460
Query: 486 KAASNVPDIDLMDLKHFPV------TDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
K V +D+ + TDD+YKY + D +SK L N
Sbjct: 461 KETGIVVSLDIHAIGELEANPNVQPTDDQYKYGFD-DISSK---VKALFVN--------- 507
Query: 540 VFCIDKHAIRHARSGASIDSIQ-LEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
G ++S+ H G+I DKTN YA GGQ D G + + +
Sbjct: 508 --------------GKFVESVSSTNHQGRFGVILDKTNFYAEQGGQQFDTGSLTVDGSLE 553
Query: 599 ENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
I ++ G ++H G + S + + D R HT +H+LN
Sbjct: 554 ----FAIEDVQVFGGYVLHIGYLKYGSLSLDDSIM--CTYDELRRWPLRNNHTATHVLNY 607
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFS----------VYGET---LSVDSVAAVEKYIND 703
LR V+ T QK V ++ D+S +Y L+ + +A VEK N
Sbjct: 608 GLRSVIGTIVDQKGSLVSPEKLRFDYSCKVNKCFEYNIYSRRKIGLTAE-LAKVEKITNS 666
Query: 704 VIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS--------DKENV----I 751
IA + + + + L + GE+YPD V ++ I D N
Sbjct: 667 FIAKNDIIYTSEVSLALAKSINGLRAVFGEVYPDPVRVVSIGFPIDEMLKDPSNAKWAET 726
Query: 752 SREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
S E C GTHV TG I+ +I + G+R I +TGD +
Sbjct: 727 SIEFCGGTHVQRTGDIKRFVIIEDSALAKGIRRIVGVTGDEA 768
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 78/115 (67%), Gaps = 6/115 (5%)
Query: 810 SQILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHN 864
+ +++ IP+GD ++ F NSGM QFK +FLG A R ANSQKCIR GGKHN
Sbjct: 24 THVVSSSTIPHGDPTLMFANSGMNQFKPIFLGTVDPNSDLARLSRAANSQKCIRAGGKHN 83
Query: 865 DLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
DL GRD+YHHTFFEMLGNWSF +Y+K +A MA E LTK LP DRLY T+
Sbjct: 84 DLEDVGRDTYHHTFFEMLGNWSFGNYFKTEAIEMAWEILTK-VYGLPKDRLYITY 137
>gi|324507432|gb|ADY43152.1| Alanyl-tRNA synthetase [Ascaris suum]
Length = 693
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 255/744 (34%), Positives = 378/744 (50%), Gaps = 74/744 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTPAP-- 68
L + +RS+F+++F N + HT V SS ++P+ D ++ F N+GM QFK +FLG + P+
Sbjct: 5 LTANEVRSAFINFFANRE-HTYVHSSSVIPFEDPTLLFANAGMNQFKPIFLGTVDPSSEL 63
Query: 69 --YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R N+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A E LT
Sbjct: 64 GRLRRAVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEVCNWAWELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K + +P D+LY +YFGG ++ GL D+E R IWL++G+P + GMK NFWEMG G
Sbjct: 124 KE-LGIPADQLYVSYFGGDEKAGLAPDDECRQIWLDIGLPESRVLPFGMKDNFWEMGDVG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIH+D G A A VNAD ++EIWN+VF+ + R + L +ID G
Sbjct: 183 PCGPCSEIHFDRVGN-RDASALVNADDPMVVEIWNLVFMQYNREEGGVLRELPMRHIDCG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LG ERLV ++QNKTS YDTD F P+ + I+ + Y ++ +D +YR++SD+
Sbjct: 242 LGLERLVAVMQNKTSNYDTDAFTPIFDAIQASVCVRAYSGKVGAADSDGIDMAYRVVSDH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R + VAL+D PD+T + LR ++R + + + G L + +LGD
Sbjct: 302 IRTLCVALSDGGRPDSTGRGYVLRRILRRGVRYANEKLGAPPG-FFASLVPVVVRLLGDT 360
Query: 364 YPEI-QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE+ +D + +I EE++ L + K + + E +QF
Sbjct: 361 FPELRKDPETVMDIINDEEAQFLKTLSRGRSLFQKAVAALESEAKQF------------- 407
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
GD+A+ LYDTYG ++ Q +A K+L++ +AFEQ + E
Sbjct: 408 ---------------PGDIAWRLYDTYGFPVDLTQLMAEEKQLSVDMDAFEQCRQKAVEM 452
Query: 483 SKAKAAS--NVPDIDLMDLKHF-----PVTDDKYKYDYHY---DTNSKRYTFPCLDTNLV 532
S A A + ++D+ + P TDD KYDY + + +Y+F + ++
Sbjct: 453 SSAGANKFRDTAELDVHGIAKLKKDGVPSTDDSPKYDYSAVGPNDITAKYSFAKCEGQVL 512
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
++ + G +DS+ V I D+TN YA GGQI D GV
Sbjct: 513 ALL----------------KEGTFVDSLYSGDKGAV--ILDRTNFYAEQGGQIYDTGV-- 552
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
LT E + E+ + G +V G+V + + L +D R M+ HT +
Sbjct: 553 LTKIGDEGAEFEVSNVQMRGGYVVLVGSVEGNISIGDRLLQ--AIDEERRSLIMKNHTGT 610
Query: 653 HLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
H+LN ALRRVL QK V D+ DFS L+ V E+ +I V
Sbjct: 611 HVLNFALRRVLGDVEQKGSLVAPDKMRFDFSAK-HALTSAQVREAEELAQGMIETHAAVF 669
Query: 713 RRHMRASELPFLTHLTVIPGEIYP 736
+ +E + L + E P
Sbjct: 670 AKDAPLAEAREVKGLRAVFDEASP 693
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG + P+ R N+QKCIR GGKHNDL G+D
Sbjct: 32 IPFEDPTLLFANAGMNQFKPIFLGTVDPSSELGRLRRAVNTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A E LTK + +P D+LY ++
Sbjct: 92 VYHHTFFEMLGNWSFGDYFKKEVCNWAWELLTK-ELGIPADQLYVSY 137
>gi|296806327|ref|XP_002843973.1| alanyl-tRNA synthetase [Arthroderma otae CBS 113480]
gi|238845275|gb|EEQ34937.1| alanyl-tRNA synthetase [Arthroderma otae CBS 113480]
Length = 963
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 285/835 (34%), Positives = 418/835 (50%), Gaps = 97/835 (11%)
Query: 4 PNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG 63
P V + +R +FLDYF GHT V SS +VP D ++ F N+GM Q+K++FLG
Sbjct: 10 PAGQETVEWPALRVRDTFLDYF-KKNGHTFVPSSSVVPLSDPTLLFANAGMNQYKSIFLG 68
Query: 64 -LTP----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDAC 118
+ P A R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 69 TIDPNSDFAQLKRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAI 128
Query: 119 RMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCN 178
+ + E LTK L +RLY TYF G++ G+ D E RDIW +GV DHI MK N
Sbjct: 129 QFSWELLTKV-YGLDPERLYVTYFEGNEGAGVGPDIEARDIWRSVGVKDDHILTGDMKDN 187
Query: 179 FWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
FWEMG GPCG SEIHYD G ++A VN D D++EIWN VFI + R ++ PL
Sbjct: 188 FWEMGDQGPCGPCSEIHYDRIGGRNAAHL-VNQDDPDVLEIWNNVFIQYNREPDRSLRPL 246
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
+IDTGLG+ERLV+ILQ+K+S YDTD+F PL I+ ++GA+ Y F + +DT
Sbjct: 247 PNKHIDTGLGYERLVSILQDKSSNYDTDVFTPLFTAIQNITGARRYTGKFGAEDTDGIDT 306
Query: 299 SYRMLSDYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYN 355
+YR+++D+ R +T A+ D P+ +R V+R + + KV+ G +L
Sbjct: 307 AYRVVADHLRTLTFAITDGAAPNNEGRGYVVRRVLRRGVRYARKYLKVEIGSFFSKLVPA 366
Query: 356 IAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
+ E +GD++PEI+ N + IL EE F K L + + + E +
Sbjct: 367 LVEQMGDMFPEIKRKQNDVMEILDEEEVSFA----------KTLDRGERQFEYY------ 410
Query: 416 GLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQK 475
Q A + ++ G + LYDT+G ++ + +A ++LT+ FE+
Sbjct: 411 ----------AQQALEAGAGKLHGADVWRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEA 460
Query: 476 LNELKERSK--AKAASN-----VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLD 528
+ KE SK AK AS+ V + ++ P T+D K+
Sbjct: 461 RLKAKEASKGQAKTASDLLKLTVHTLSTLEKNGVPKTNDDAKF----------------- 503
Query: 529 TNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQ-LEHNAWVGLIFDKTNLYATAGGQIDD 587
G + AI H + IDS + + N +G+I DKTN YA GGQ D
Sbjct: 504 --------GKGNIVANIKAICHGKE--VIDSTKDIPANEQIGIILDKTNFYAEQGGQEYD 553
Query: 588 IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCM 646
G + + +++ + G ++H G + +F V + + E D R
Sbjct: 554 TGKIIIDGQAE----LDVQNVQMYGGYVLHTGFIKYGNFSVNDSVIA--EYDELRRWPIR 607
Query: 647 RAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI 705
HT +H+LN ALR VL QK V +++ DFS + +S + +E D I
Sbjct: 608 NNHTGTHILNFALREVLGDGIDQKGSLVAAEKLRFDFS-HKSAVSDSDLEKIEAKSTDYI 666
Query: 706 ANQVQVDRRHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISD-KENVISR 753
V + + + +T + + GE YPD D IL ++ D + +S
Sbjct: 667 RQNCAVYSQEVPLATAREITGVRAVFGETYPDPVRVVSVGVELDEILKNVKDPRWEGVSI 726
Query: 754 EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHLS 804
E C GTHV TG I+ ++ G+R I +TG+ + + A E G+ L+
Sbjct: 727 EFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEEAHEVQRVAREFGERLN 781
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG + P A R NSQKCIR GGKHNDL G+D
Sbjct: 45 VPLSDPTLLFANAGMNQYKSIFLGTIDPNSDFAQLKRAHNSQKCIRAGGKHNDLDDVGKD 104
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + + E LTK L +RLY T+
Sbjct: 105 SYHHTFFEMLGNWSFGDYFKKEAIQFSWELLTK-VYGLDPERLYVTY 150
>gi|396471207|ref|XP_003838816.1| similar to alanyl-tRNA synthetase [Leptosphaeria maculans JN3]
gi|312215385|emb|CBX95337.1| similar to alanyl-tRNA synthetase [Leptosphaeria maculans JN3]
Length = 968
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 275/833 (33%), Positives = 412/833 (49%), Gaps = 90/833 (10%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPR 71
+R +FLDYF +GH+ V SS +VP D ++ F N+GM Q+K +F G + P A R
Sbjct: 15 VRQTFLDYF-KERGHSFVPSSSVVPLSDPTLLFTNAGMNQYKAIFQGTIDPSSDFAQLKR 73
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A E LTK
Sbjct: 74 ATNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIGFTWELLTKV-YG 132
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ RLY TYF G++ L D + +++W +GVP DHI MK NFWEMG GPCG
Sbjct: 133 IDTKRLYVTYFEGNED--LEPDLKAKELWKSVGVPEDHILPGDMKDNFWEMGDQGPCGPC 190
Query: 192 SEIHYDMK----GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SE+HYD++ G +A + VN D ++IEIWN VF+ + R ++ PL +IDTGL
Sbjct: 191 SEVHYDLREPEGGNYRNAASLVNMDDPEVIEIWNNVFMQYNREPDRSLRPLPNKHIDTGL 250
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G+ERLV++LQ+ S YDTD+F PL + I++V+GA+ Y F + +DT+YR+++D++
Sbjct: 251 GYERLVSVLQHTKSNYDTDVFTPLFKRIQEVTGAREYRGGFGADDPDGIDTAYRVVADHT 310
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
RM++ A+AD P+ + +R V+R + F+V+ G ++ + + +GD++
Sbjct: 311 RMMSFAIADGGVPNNVGRGYVVRRVLRRGARYARKYFEVEIGDFFSKIIPTLVDQMGDMF 370
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI+ I IL EE + F K L + G V+ KY
Sbjct: 371 PEIRKKQQDIIEILDEEEKAFA----------KSLDR--------------GEVIFEKYA 406
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
K A+ ++ GD + LYDTYG ++ + +A + L + + E+ + +E SK
Sbjct: 407 QKAKAK--GSNDLPGDDVWRLYDTYGFPVDLTKLMAEERGLNINDKEVEKAQEKAREASK 464
Query: 485 A--KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
KA + V D+ DL DD K D +S +Y + + I Q
Sbjct: 465 GDKKAGAAVVKFDVHDLGALDAMDDVPKTD-----DSPKYGRENITATIKAIYHNKQFLK 519
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
K ++ G++ DKTN YA GGQ D G + +
Sbjct: 520 STK---------------EVPEGEQFGVLLDKTNFYAEQGGQEYDTGRLLVDGEAE---- 560
Query: 603 VEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+ I + G ++H G + KV G E D R HT +H+LN ALR
Sbjct: 561 ISIENVQVYAGYVLHTGYLKYGELKV--GSEVIAEFDELRRHPIRNNHTGTHVLNYALRE 618
Query: 662 VLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL QK V ++ DFS + LS + VE I +V + + S+
Sbjct: 619 VLGNEVDQKGSLVAPEKLRFDFS-HKAGLSDAEIEKVESISTTYIKADAKVYAKDVPLSK 677
Query: 721 LPFLTHLTVIPGEIYPDDVILIDI--------SDKEN----VISREPCCGTHVFNTGHIE 768
+T + + GE YPD V ++ + +D +N +S E C GTHV TG I+
Sbjct: 678 AKEITGVRAVFGETYPDPVRVVSVGQPVEDLLADPKNPAWGKLSVEFCGGTHVLKTGEIK 737
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIPYG 821
++ G+R I +TG + +T ++ + G +P+G
Sbjct: 738 ELVILEESGIAKGIRRIVAVTGQEAYNVQRLANDFAT-----RLESFGKMPFG 785
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 69/107 (64%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K +F G + P A R NSQKCIR GGKHNDL G+D
Sbjct: 37 VPLSDPTLLFTNAGMNQYKAIFQGTIDPSSDFAQLKRATNSQKCIRAGGKHNDLDDVGKD 96
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A E LTK + RLY T+
Sbjct: 97 SYHHTFFEMLGNWSFGDYFKKEAIGFTWELLTK-VYGIDTKRLYVTY 142
>gi|189203303|ref|XP_001937987.1| alanyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187985086|gb|EDU50574.1| alanyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 966
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 274/838 (32%), Positives = 415/838 (49%), Gaps = 100/838 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R +FLDYF +GHT V SS +VP D ++ F N+GM Q+K++F G A R
Sbjct: 15 VRQTFLDYF-KERGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFQGTVDPSSDFAQLKR 73
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
ANSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A E LT
Sbjct: 74 AANSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIGFTWELLTGV-YG 132
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ RLY TYF G+D GL D E +++W +GVP DHI MK NFWEMG GPCG
Sbjct: 133 IDPQRLYVTYFEGAD--GLEPDLEAKELWKSVGVPEDHILPGDMKDNFWEMGDQGPCGPC 190
Query: 192 SEIHYDMK----GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SE+HYD++ G+ +A + VN D ++IEIWN VF+ + R ++ PL +IDTG+
Sbjct: 191 SEVHYDLREPEGGKYRNAASLVNMDDPEVIEIWNNVFMQYNREPDRSLRPLPNKHIDTGM 250
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G+ERLV++LQ+K S YDTD+F PL + I++++GA+ Y F + +DT+YR+++D+
Sbjct: 251 GYERLVSVLQHKKSNYDTDVFTPLFKKIQEITGAREYRGKFGAEDPDGIDTAYRVVADHV 310
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
RM++ A+AD P+ + +R V+R + F+ G ++ + E +GD++
Sbjct: 311 RMMSFAIADGGVPNNVGRGYVVRRVLRRGARYARKYFETDIGDFFSKIVPTLVEQMGDMF 370
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI+ I IL EE + F K L + G V+ KY
Sbjct: 371 PEIKKKQQDIVEILDEEEKAFA----------KSLDR--------------GEVIFEKYA 406
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
K A+ + GD + LYDTYG ++ + +A + L + + E+ + +E SK
Sbjct: 407 QK--AKVKGSDALPGDDVWRLYDTYGFPVDLTKLMAEERGLKIDDKEVEEAQEKAREASK 464
Query: 485 A--KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
KAA + D+ DL P TDD KY N+ ++
Sbjct: 465 GDKKAAGALVKFDVHDLGALENMPDVPKTDDSAKYGRE---------------NITSVI- 508
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
AI H + + ++ G++ D+TN YA GGQ D+G +
Sbjct: 509 ---------KAIYHNKKFLK-STKEVPEGEQFGVLLDRTNFYAEQGGQEYDMGKLVVDGE 558
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
++I + G ++H G + +++ G E D R HT +H+LN
Sbjct: 559 AC----IDITNVQVYAGYVLHTG-YLQDGELSVGSEVIAEFDESRRHPIRNNHTGTHVLN 613
Query: 657 AALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
ALR VL QK V ++ DFS + LS + VE + I +V +
Sbjct: 614 YALREVLGNEVDQKGSLVAPEKLRFDFS-HKAGLSEAELDKVESISSKYIKEDAKVYAKD 672
Query: 716 MRASELPFLTHLTVIPGEIYPD-----------DVILIDI-SDKENVISREPCCGTHVFN 763
+ + + + + GE YPD + +L D+ ++K +S E C GTHV
Sbjct: 673 VPLASAKEIRGVRAVFGETYPDPVRVVSVGVPVEELLADVKNEKWEKLSIEFCGGTHVLK 732
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIPYG 821
TG I+ ++ G+R I +TG + + L+T ++ +G +P+G
Sbjct: 733 TGEIKELVILEESGIAKGIRRIVAVTGQEAYRV----QRLATQFQ-ERVEAMGKMPFG 785
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 68/107 (63%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++F G A R ANSQKCIR GGKHNDL G+D
Sbjct: 37 VPLSDPTLLFTNAGMNQYKSIFQGTVDPSSDFAQLKRAANSQKCIRAGGKHNDLDDVGKD 96
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A E LT + RLY T+
Sbjct: 97 SYHHTFFEMLGNWSFGDYFKKEAIGFTWELLTG-VYGIDPQRLYVTY 142
>gi|19114552|ref|NP_593640.1| mitochondrial and cytoplasmic alanine-tRNA ligase Ala1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|3183171|sp|O13914.1|SYA_SCHPO RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|2330773|emb|CAB11162.1| mitochondrial and cytoplasmic alanine-tRNA ligase Ala1 (predicted)
[Schizosaccharomyces pombe]
Length = 959
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 265/823 (32%), Positives = 400/823 (48%), Gaps = 109/823 (13%)
Query: 7 SSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP 66
S V + IR +FL YF GHT+V SS ++PY D ++ F N+GM QFK +FLG
Sbjct: 5 SEVVNWPANEIRRTFLKYF-EDHGHTIVPSSSVIPYDDPTLLFANAGMNQFKPIFLGTVD 63
Query: 67 -----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMA 121
A R +SQKC+R GGKHNDL G+D+YHHT FEMLGNWSF DY+K++A MA
Sbjct: 64 PSSDFAKLKRACDSQKCIRAGGKHNDLEDVGKDNYHHTMFEMLGNWSFGDYFKKEAIAMA 123
Query: 122 LEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWE 181
+ LT L D+LY TYFGG ++ GL D E R +WL++G+ + +K NFWE
Sbjct: 124 WDLLTNV-YGLKKDQLYVTYFGGHEESGLEPDLEARQLWLDIGIDESRVIPGSLKDNFWE 182
Query: 182 MGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
MG GPCG SEIHYD G + VN D +++EIWNIVFI R ++ PL
Sbjct: 183 MGDQGPCGPCSEIHYDRIGN-RTVPELVNMDDPNVLEIWNIVFIQFNREKDGSLRPLPNR 241
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
++DTG+GFERLV+++QNKTS YDTD+F P+ I++++ A+PY + +DT+YR
Sbjct: 242 HVDTGMGFERLVSVIQNKTSNYDTDVFSPIFAKIQELTNARPYTGKMGDEDVDGIDTAYR 301
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAE 358
+++D+ R +T A++D P+ + LR ++R F V G LS + E
Sbjct: 302 VVADHVRTLTFAISDGGVPNNEGRGYVLRRILRRGARYVRKKFGVPIGNFFSRLSLTVVE 361
Query: 359 ILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
+GD +PE++ ++ ++ +L EE F + L + + EQ+
Sbjct: 362 QMGDFFPELKRKVDDVRELLDEEEESFS----------RTLDRGEKMFEQY--------- 402
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
+ PS T + G+ + LY+TYG ++ +A + + FE
Sbjct: 403 ------AAAAKKTPSKT-LQGNDVWRLYETYGFPVDLTHLMAEEAGIKIDEPGFEAAQAR 455
Query: 479 LKERSK--AKAASNVPDIDLMD---------LKHFPVTDDKYKYDYHYDTNSKRYTFPCL 527
KE SK +K S+ D+ ++D + P TDD +K++
Sbjct: 456 SKEISKQASKGGSSGDDLLVLDVHALGALSKMDDIPETDDVFKHN--------------- 500
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQ--- 584
+L ++ G I H + G + +GL+ D+TN YA GGQ
Sbjct: 501 SVSLKSVIKG----------IYH-KGGFQKSTEGFNSGEQLGLLLDRTNFYAEQGGQEYD 549
Query: 585 -----IDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDA 639
ID + +TN G V L + +GN+ + V E D
Sbjct: 550 TGHIVIDGVADFRVTNVQVYAGYV-------LHTGFLEYGNLTVNDSVV------CEYDE 596
Query: 640 RMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVE 698
R M HT +H+LN ALR L Q+ V ++ DFS Y ++ +D + VE
Sbjct: 597 IRRWHLMNNHTVTHILNLALRNTLGDGIDQRGSLVSQEKLRFDFS-YKSSIPIDKLLLVE 655
Query: 699 KYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP--- 755
Y N+VI + + V + + S+ + L + GE+YPD V ++ I + + +EP
Sbjct: 656 NYCNNVIQDNLSVYSKEVALSKAKEINGLRAVFGEVYPDPVRVVCIGVDIDTLLQEPKKP 715
Query: 756 ---------CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLT 789
C GTH +G I+ ++ G+R I +T
Sbjct: 716 DWTKYSIEFCGGTHCDKSGEIKDFVILEENGIAKGIRRIVAVT 758
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM QFK +FLG A R +SQKCIR GGKHNDL G+D
Sbjct: 37 IPYDDPTLLFANAGMNQFKPIFLGTVDPSSDFAKLKRACDSQKCIRAGGKHNDLEDVGKD 96
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHT FEMLGNWSF DY+K++A MA + LT L D+LY T+
Sbjct: 97 NYHHTMFEMLGNWSFGDYFKKEAIAMAWDLLTN-VYGLKKDQLYVTY 142
>gi|71022301|ref|XP_761380.1| hypothetical protein UM05233.1 [Ustilago maydis 521]
gi|46097613|gb|EAK82846.1| hypothetical protein UM05233.1 [Ustilago maydis 521]
Length = 990
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 278/832 (33%), Positives = 401/832 (48%), Gaps = 98/832 (11%)
Query: 1 MNNPNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNV 60
++ S + + +R +F YF + HT V SS +PY D ++ F N+GM Q+K +
Sbjct: 11 LDAATTSRFGDWPATKVRDTFTGYFQERK-HTFVPSSSTIPYDDPTLLFANAGMNQYKPI 69
Query: 61 FLGLTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKR 115
FLG+ R NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K+
Sbjct: 70 FLGIADPNSSFGSMKRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKK 129
Query: 116 DACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGM 175
+A MA E LTK LP DRLY TYF G + GL D E RD+WL++GV DHI
Sbjct: 130 EAIEMAWELLTKV-YGLPKDRLYVTYFEGDAKQGLEPDLEARDLWLKVGVDEDHILTGDA 188
Query: 176 KCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTI 235
K NFWEMG+TGPCG SEIHYD G ++A VN D ++IEIWN VF+ R ++
Sbjct: 189 KDNFWEMGATGPCGPCSEIHYDRIGGRNAA-DLVNKDDPNVIEIWNNVFMQFNREDDGSL 247
Query: 236 VPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTD 295
PL +IDTG+GFERLV+ILQ+K S YDTD+F P+ I++++GA+ Y ++
Sbjct: 248 RPLPAKHIDTGMGFERLVSILQDKPSNYDTDVFTPIFNKIQQLTGARAYTGKLGAEDKDG 307
Query: 296 LDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKEL 352
+DT+YR+++D+ R +T A++D PD + LR ++R F+V G +L
Sbjct: 308 IDTAYRVVADHVRTLTFAISDGGVPDRDGRGYVLRRILRRGTRYVRKYFQVPIGSFFSQL 367
Query: 353 SYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIM 412
+ E +G +PEI ++ ++ IL EE F + L + + E++
Sbjct: 368 VPTLVEQMGHFFPEITKKVDDVKAILDEEEASF----------ARTLDRGERLFEEYAAK 417
Query: 413 EEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF 472
KQL SG+ + LYDT+G ++ +A + L + + F
Sbjct: 418 A-------KAAGNKQL---------SGNDVWKLYDTFGFPVDLTLIMAEEQGLGVNEKEF 461
Query: 473 EQKLNELKERSKA---KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYT 523
E E KE SKA K + D+ DL H P T D D+ Y N+ + +
Sbjct: 462 EAAQAESKEISKAGGKKGETEAVKFDVHDLGHLEKDSSVPKTQD----DFKYGVNTVKAS 517
Query: 524 FPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGG 583
V + D F + I + G++ D+T LYA +GG
Sbjct: 518 --------VKAIYQDHAFVDNTSKIG-------------DRAKNFGILLDRTCLYAESGG 556
Query: 584 QIDDIGVAYLTNTTQENGKVE--IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEV--DA 639
Q D G + +GK E + + G ++H G++ GL V V D
Sbjct: 557 QQADTGSIVI------DGKTEFVVEDAQVFSGYVLHIGHLKHG---ELGLNDEVVVSYDQ 607
Query: 640 RMRLGCMRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVE 698
R HT +H+LN LR VL QK V + DFS + + ++V + +E
Sbjct: 608 SRRGPLQSNHTATHILNFGLREVLGDHIDQKGSLVAPTKLRFDFS-HKQGVNVQELKKIE 666
Query: 699 KYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS--------DKENV 750
D I V V + M + L + GE YP+ V ++ + D EN
Sbjct: 667 DISIDWIKRDVGVYSKEMPLDTAQKIPGLRAVFGEAYPNPVRVVTLEYDLDTIADDIENT 726
Query: 751 ISR----EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
R E C GTHV TG I + G+R I +TG+ + A +
Sbjct: 727 KWRGTSVEFCGGTHVAKTGEIGEFVITEESGIAKGIRRIIAVTGNEAAAVTK 778
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM Q+K +FLG+ R NSQKCIR GGKHNDL G+D
Sbjct: 49 IPYDDPTLLFANAGMNQYKPIFLGIADPNSSFGSMKRAVNSQKCIRAGGKHNDLDDVGKD 108
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A MA E LTK LP DRLY T+
Sbjct: 109 TYHHTFFEMLGNWSFGDYFKKEAIEMAWELLTK-VYGLPKDRLYVTY 154
>gi|343428890|emb|CBQ72435.1| probable ALA1-alanyl-tRNA synthetase, cytosolic [Sporisorium
reilianum SRZ2]
Length = 990
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 275/812 (33%), Positives = 397/812 (48%), Gaps = 100/812 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R++F YF + HT V SS +PY D ++ F N+GM Q+K +FLG+ R
Sbjct: 27 VRNTFTGYF-EERAHTFVPSSSTIPYDDPTLLFANAGMNQYKPIFLGIADPNSSFGSMKR 85
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A +MA E LTK
Sbjct: 86 AVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIQMAWELLTKV-YG 144
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY TYF G + GL D E RD+WL++GV DHI K NFWEMG+TGPCG
Sbjct: 145 LPKDRLYVTYFEGDAKQGLEPDLEARDLWLKVGVDEDHILTGDAKDNFWEMGATGPCGPC 204
Query: 192 SEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIHYD + G +S L VN D ++IEIWN VF+ R ++ PL +IDTG+GFE
Sbjct: 205 SEIHYDRIGGRNASDL--VNKDDPNVIEIWNNVFMQFNREDDGSLRPLPAKHIDTGMGFE 262
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV+ILQ+K S YDTD+F P+ + I++++GA+ Y ++ +DT+YR+++D+ R +
Sbjct: 263 RLVSILQDKPSNYDTDVFTPIFDKIQQLTGARAYTGKLGAEDKDGIDTAYRVVADHVRTL 322
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
T A++D PD + LR ++R F+V G +L + + +G +PEI
Sbjct: 323 TFAISDGGVPDRDGRGYVLRRILRRGTRYVRKYFQVPIGSFFSQLVPTLVDQMGHFFPEI 382
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
++ ++ IL EE F + L + + E++
Sbjct: 383 TKKVDDVKAILDEEEASF----------ARTLDRGEKLFEEYAAK--------------- 417
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA-- 485
A+ E+SG+ + LYDT+G ++ +A + L + + FE E KE SKA
Sbjct: 418 -AKADGKKELSGNDVWKLYDTFGFPVDLTLIMAEEQGLGVNEKEFEAAQAESKELSKAGG 476
Query: 486 -KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
K + D+ DL H P T D +KY S V + D
Sbjct: 477 KKGETEAVKFDVHDLGHLEKDASVPKTQDDFKYGVSTVKAS------------VKAIYQD 524
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
F + I + G++ D+T LYA +GGQ D G +
Sbjct: 525 HAFFAETTKIG-------------DRAKNFGVLLDRTCLYAESGGQQADTGSIVI----- 566
Query: 599 ENGKVE--IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEV--DARMRLGCMRAHTTSHL 654
+GK E + + G ++H G++ + L VEV D R HT +H+
Sbjct: 567 -DGKTEFVVEDAQVFSGYVLHIGHLK---RGELALNDEVEVSYDQNRRGPLQSNHTATHI 622
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN LR VL QK V + DFS + + ++V + +E D I V V
Sbjct: 623 LNFGLREVLGDYIDQKGSLVAPTKLRFDFS-HKQGVNVQELKKIEDISIDWIKRDVGVFS 681
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKENVISR----EPCCGTHV 761
+ M + L + GE YP+ V ++ + D EN R E C GTHV
Sbjct: 682 KEMPLDVAQKIPGLRAVFGEAYPNPVRVVTLEHDLDTIAGDLENPKWRGTSVEFCGGTHV 741
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I + G+R I +TG+ +
Sbjct: 742 AKTGDIREFVITEESGIAKGIRRIIAVTGEEA 773
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM Q+K +FLG+ R NSQKCIR GGKHNDL G+D
Sbjct: 49 IPYDDPTLLFANAGMNQYKPIFLGIADPNSSFGSMKRAVNSQKCIRAGGKHNDLDDVGKD 108
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A +MA E LTK LP DRLY T+
Sbjct: 109 TYHHTFFEMLGNWSFGDYFKKEAIQMAWELLTK-VYGLPKDRLYVTY 154
>gi|312069509|ref|XP_003137715.1| alanyl-tRNA synthetase [Loa loa]
gi|307767125|gb|EFO26359.1| alanyl-tRNA synthetase [Loa loa]
Length = 967
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 275/819 (33%), Positives = 401/819 (48%), Gaps = 92/819 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L IR++F+++F + + HT V SS ++P+ D ++ F N+GM Q+K +FLG
Sbjct: 4 LTCDEIRATFINFFKDRE-HTYVHSSSVIPFDDPTLLFANAGMNQYKPIFLGTVEPSSEM 62
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A R N+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K + C A E LT
Sbjct: 63 AKLKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKLEVCNWAWELLT 122
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K + +P +RLY +YFGG D+ GL DEE R IWL +GVP HI GMK NFWEMG G
Sbjct: 123 KV-LGIPGERLYVSYFGGDDKTGLDADEECRQIWLNIGVPPSHILSFGMKDNFWEMGDVG 181
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G+ A VNAD ++EIWN+VFI R ++ L +ID G
Sbjct: 182 PCGPCSEIHYDRIGD-RDASHLVNADDPMVVEIWNLVFIQFNREEDGSLKQLPHKHIDCG 240
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LGFERLV +LQNK S YDTD+F PL I + +PY + +D +YR+++D+
Sbjct: 241 LGFERLVAVLQNKLSNYDTDVFTPLFSAIHNGTKVRPYSGKVGADDVDGIDMAYRVVADH 300
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R + +AL+D PD T + LR ++R + + + G + L + +LG
Sbjct: 301 IRTLCIALSDGGRPDNTGRGYVLRRILRRGIRYANEKLSATPG-FLSSLVPTVVNLLGKT 359
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE+ + I+ +E + F K K K L++ NI+
Sbjct: 360 FPELHKDPQTVMDIINDEEKQF---LKTLNKGRTLFQKAATRLQERNIL----------- 405
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
G++A+ LYDTYG ++ Q +A + L + EAFE + E S
Sbjct: 406 --------------PGNVAWRLYDTYGFPLDLTQLMAEERGLLIDFEAFENCRQQAAEIS 451
Query: 484 KAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYH---YDTNSKRYTFPCLDTNLVG 533
A+A IDL + K PVTDD KY Y+ + Y F + G
Sbjct: 452 AARANKMRDAIDLDVSAISELKNKGIPVTDDSPKYKYYPLPPENQQTMYNFEKCE----G 507
Query: 534 IVIG---DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
I++ D++F +D++ E + +I D+TN YA GGQ+ D GV
Sbjct: 508 IILALRKDKIF---------------VDTLNSED--FGAIILDRTNFYAEQGGQLFDTGV 550
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ E + + G +V G V V + +D R M+ HT
Sbjct: 551 LREVDKGSE---FIVSNVQIRGGYVVLVGTVEGELSVGDKVIQ--AIDEERRNLIMKNHT 605
Query: 651 TSHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ 710
+H+LN ALR+V+ QK V D D + + L+ + + VE+ +I
Sbjct: 606 GTHVLNFALRKVVGEVEQKGSLVAPDRLRFDLT-SKQPLTYEQIKIVEEESQMLIDTNAT 664
Query: 711 VDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS--------DKENVI----SREPCCG 758
V ++ +E + L + E YPD V ++ + DK+ + + E C G
Sbjct: 665 VFAKNAPLAEARQINGLRAVFEEAYPDPVRIVSVGVPIEELLKDKDGDLAVNTAVEFCGG 724
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TH+ N GHI + ++ G+R I LTG + A+
Sbjct: 725 THLHNVGHIGKLVITVEEAIAKGIRRIIALTGPEAFRAI 763
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM Q+K +FLG A R N+QKCIR GGKHNDL G+D
Sbjct: 31 IPFDDPTLLFANAGMNQYKPIFLGTVEPSSEMAKLKRAVNTQKCIRAGGKHNDLDDVGKD 90
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K + C A E LTK + +P +RLY ++
Sbjct: 91 VYHHTFFEMLGNWSFGDYFKLEVCNWAWELLTK-VLGIPGERLYVSY 136
>gi|451853657|gb|EMD66950.1| hypothetical protein COCSADRAFT_83417 [Cochliobolus sativus ND90Pr]
Length = 966
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 274/839 (32%), Positives = 413/839 (49%), Gaps = 102/839 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPR 71
+R +FLDYF +GHT V SS +VP D ++ F N+GM Q+K +F G + P A R
Sbjct: 15 VRQTFLDYF-KERGHTFVPSSSVVPLSDPTLLFTNAGMNQYKAIFQGTIDPSSDFAQLKR 73
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
ANSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A E LTK
Sbjct: 74 AANSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIGFTWELLTKV-YG 132
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ RLY TYF G+D+ L D E +++WL+ GVP DHI MK NFWEMG GPCG
Sbjct: 133 IDPKRLYVTYFEGTDE--LEPDIEAKELWLKAGVPEDHILPGDMKDNFWEMGDQGPCGPC 190
Query: 192 SEIHYDMK----GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SE+HYD++ G+ +A + VN D ++IEIWN VF+ + R ++ L +IDTG+
Sbjct: 191 SEVHYDLREPENGQYRNAASLVNMDDPEVIEIWNNVFMQYNREPDRSLRSLPNKHIDTGM 250
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G+ERLV++LQ+K S YDTD+F PL + I+ ++GA+ Y F + +DT+YR+++D+
Sbjct: 251 GYERLVSVLQHKKSNYDTDVFTPLFQKIQSITGAREYRGKFGDEDPDGIDTAYRVVADHV 310
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
RM++ A+AD P+ + +R V+R + F + G ++ + + +GD++
Sbjct: 311 RMMSFAIADGGVPNNVGRGYVVRRVLRRGARYARKYFACEIGDFFSKIVPTLVDQMGDMF 370
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI+ I IL EE + F K L + + E++
Sbjct: 371 PEIRKKQQDIIEILDEEEKAFA----------KSLDRGETIFEKY--------------- 405
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
Q A+ E+ GD + LYDTYG ++ + +A + L + E E + +E SK
Sbjct: 406 -AQKAKTKGSDELPGDDVWRLYDTYGFPVDLTKLMAEERGLKINDEEVEVAQEKAREASK 464
Query: 485 A--KAASNVPDIDLMDL------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
KAA + D+ DL P TDD KY N+ ++
Sbjct: 465 GDKKAAGLLVKFDVHDLGALENMPEVPKTDDSPKYGRE---------------NITAVI- 508
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
AI H + + ++ G++ D+TN YA GGQ D G +
Sbjct: 509 ---------KAIYHNKKFLK-STAEVPKGEQFGVLLDRTNFYAEQGGQEFDTGKLLVDGE 558
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+ + I + G ++H G + +++ G E D R HT +H+LN
Sbjct: 559 AE----ISIENVQVYAGYVLHTG-YIKYGELSVGSEVIAEFDELRRHPIRNNHTGTHVLN 613
Query: 657 AALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
ALR VL QK V ++ DFS + LS + VE+ + I QV +
Sbjct: 614 YALREVLGNEVDQKGSLVAPEKLRFDFS-HKAGLSDAELDKVERISSAYIKEDKQVYAKD 672
Query: 716 MRASELPFLTHLTVIPGEIYPD-----------DVILIDI-SDKENVISREPCCGTHVFN 763
+ + + + + GE YPD + +L D+ ++K +S E C GTHV
Sbjct: 673 VPLASAKEIRGVRAVFGETYPDPVRVVSVGVPVEDLLKDVKNEKWEKLSIEFCGGTHVLK 732
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQ-ILNVGNIPYG 821
TG I+ ++ G+R I +TG + A F + + +G +P+G
Sbjct: 733 TGEIKDLVILEESGIAKGIRRIVAVTGQEAYNV------QRVAGEFQERVEAMGKMPFG 785
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K +F G + P A R ANSQKCIR GGKHNDL G+D
Sbjct: 37 VPLSDPTLLFTNAGMNQYKAIFQGTIDPSSDFAQLKRAANSQKCIRAGGKHNDLDDVGKD 96
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A E LTK + RLY T+
Sbjct: 97 SYHHTFFEMLGNWSFGDYFKKEAIGFTWELLTK-VYGIDPKRLYVTY 142
>gi|240278873|gb|EER42379.1| alanyl-tRNA synthetase [Ajellomyces capsulatus H143]
Length = 961
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 269/818 (32%), Positives = 415/818 (50%), Gaps = 90/818 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R++FLD+F GHT V SS +VP D ++ F N+GM Q+K++FLG A R
Sbjct: 17 VRNAFLDFF-KENGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDFATLRR 75
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A R + + LTK
Sbjct: 76 AHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIRYSWDLLTKV-YG 134
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYF G+ G+ D E +++WL +GV DH+ MK NFWEMG GPCG
Sbjct: 135 LNPDRLYVTYFEGNPDAGIGPDLEAKELWLSVGVAEDHLLSGNMKDNFWEMGEQGPCGPC 194
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIHYD G +A VN D +++EIWN VFI + R ++ PL ++DTG+G+ER
Sbjct: 195 SEIHYDRIG-ARNASHLVNQDDPNVLEIWNNVFIQYNREPDKSLRPLPNKHVDTGMGYER 253
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV+ILQNK+S YDTD+F PL E I +++G +PY F + +DT+YR+++D+ R +T
Sbjct: 254 LVSILQNKSSNYDTDVFTPLFEKISEITGCRPYTGKFHEEDTDGIDTAYRVVADHVRTLT 313
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A++D P+ + +R V+R + V+ G ++ + + +GD++PEI+
Sbjct: 314 FAISDGASPNNEGRGYVVRRVLRRGARYARKYLNVEIGGFFSKIVPTLVDQMGDMFPEIR 373
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+ IL EE F K L + + E++ +
Sbjct: 374 RKQTDVMEILDEEEISFA----------KTLDRGERLFEEYALQ---------------- 407
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK--AK 486
A+ ++ G + LYDT+G ++ + +A + LT+ + FE+ + KE SK K
Sbjct: 408 AKQKGSGKLHGADVWRLYDTFGFPVDLTRLMAEERGLTIDNAEFEEARLKSKEASKGQGK 467
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
++V + + DL DD K + + ++ + + + I +
Sbjct: 468 RTADVVKLTVHDLGLLETMDDVPKTN-----DDAKFGRGNITSQIKAIYYNKKF------ 516
Query: 547 AIRHARSGASIDSIQ-LEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
+DS + + G+I D+TN YA GGQ +D G + +GK E+
Sbjct: 517 ----------VDSTKDIPQGEQFGIILDRTNFYAEQGGQENDTGKIII------DGKAEL 560
Query: 606 G--ELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
++ G I+H G + SF V + + E D R HT +H+LN ALR+V
Sbjct: 561 AVEDVQVYGGYILHTGFMKYGSFNVNDSVIA--EYDELRRWPIRNNHTGTHILNFALRQV 618
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L QK V +++ DFS + +S + +E+ D I V + + +
Sbjct: 619 LGDGIEQKGSLVAAEKLRFDFS-HKSAVSDSDLEKIERISTDYIRQNCAVYAKDVPLATA 677
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDK-----ENV-------ISREPCCGTHVFNTGHIES 769
++ + + GE YPD V ++ + + +NV IS E C GTHV TG I+
Sbjct: 678 RGISGVRAVFGETYPDPVRVVSVGVELEEILQNVHDPRWKDISIEFCGGTHVQKTGDIKD 737
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHL 803
++ G+R I +TG+ + + A E G+ L
Sbjct: 738 LVILEESGIAKGIRRIIAVTGEEAHEVQRIAKEFGERL 775
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 39 VPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDFATLRRAHNSQKCIRAGGKHNDLDDVGKD 98
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A R + + LTK L DRLY T+
Sbjct: 99 SYHHTFFEMLGNWSFGDYFKKEAIRYSWDLLTK-VYGLNPDRLYVTY 144
>gi|367017930|ref|XP_003683463.1| hypothetical protein TDEL_0H03930 [Torulaspora delbrueckii]
gi|359751127|emb|CCE94252.1| hypothetical protein TDEL_0H03930 [Torulaspora delbrueckii]
Length = 956
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 272/844 (32%), Positives = 408/844 (48%), Gaps = 97/844 (11%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I R +K++R++FLDYF + + H V SSP++PY D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQRWTAKNVRNTFLDYFKSKE-HRFVPSSPVIPYDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
PA R NSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A
Sbjct: 62 DPASDFYTMKRAYNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAINY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ E LTK +P DRLY TYF G + GL D E ++W +GVP DHI K NFW
Sbjct: 122 SWELLTKV-YGIPADRLYVTYFEGDSKQGLEPDVEALELWKSVGVPEDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D D++E+WN+VFI R ++ L
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNQDDPDVLEVWNLVFIQFNREQDGSLKSLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F+PL +I++++GA+PY F T + +DT+Y
Sbjct: 240 KHIDTGMGFERLVSVLQDCRSNYDTDVFMPLFASIQELTGARPYAGKFGTEDADGVDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R +T ALAD P+ + LR ++R + G L+ +
Sbjct: 300 RVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSRLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ + +++PE+ + + IL EE F K L + + E++
Sbjct: 360 DQVQEMFPEVAKDPSFLFEILDEEEASF----------AKTLDRGERLFEKY-------- 401
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
A + G + LYDTYG ++ + +A K LT+ FE+
Sbjct: 402 --------ADAAAQSGNKTLDGLQVWRLYDTYGFPVDLTELMAEEKGLTIDGPGFEKAKQ 453
Query: 478 ELKERSKAKAAS--------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
E E SK NV ++ ++ +H P TDD S +Y +D
Sbjct: 454 ESYEASKRGGKKDNSSLLKLNVHELSQLNEEHVPKTDD-----------SAKYGTQDVDA 502
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
++ + G Q ++ I E G+I DKT YA GGQ D+G
Sbjct: 503 TILRLFDGSQF----------------VNEIT-EPGKKYGIILDKTCFYAEQGGQEYDMG 545
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ + + ++ + G + H G ++ K++ D R H
Sbjct: 546 KIVIDGSAE----FDVDNVQLYNGFVFHTGTLLEG-KLSINDKIIASYDELRRFPIRNNH 600
Query: 650 TTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +H+LN L L T QK V ++ DFS + + L+VD + VE N+ I
Sbjct: 601 TGTHILNYGLLETLGTEVDQKGSLVAPEKLRFDFS-HKKALTVDELRKVENISNEQIKQN 659
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPC 756
+ V + + + ++ + GE YPD V ++ + S++ S E C
Sbjct: 660 LSVYYKDVPLDLARSIYNVRAVFGETYPDPVRVVSVGRPVDELLENPASEEWGKYSIEFC 719
Query: 757 CGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVG 816
GTHV T I ++ G+R I +TG + A K S++L
Sbjct: 720 GGTHVAKTSDIREFVILEESGIAKGIRRIVAVTGSEAHEAQRIAKQYE-----SELLAAE 774
Query: 817 NIPY 820
+P+
Sbjct: 775 KLPF 778
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM Q+K +FLG + PA R NSQKCIR GGKHNDL GRD
Sbjct: 36 IPYDDPTLLFANAGMNQYKPIFLGTVDPASDFYTMKRAYNSQKCIRAGGKHNDLEDVGRD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK +P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAINYSWELLTK-VYGIPADRLYVTY 141
>gi|156839933|ref|XP_001643652.1| hypothetical protein Kpol_1040p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156114272|gb|EDO15794.1| hypothetical protein Kpol_1040p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 956
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 269/804 (33%), Positives = 405/804 (50%), Gaps = 82/804 (10%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTPAP- 68
R + +R++FLDYF + + H V+SSP+VP+ D ++ F N+GM Q+K +FLG + P+
Sbjct: 8 RWTAAVVRNTFLDYFKSKE-HKFVRSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPSSE 66
Query: 69 ---YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
R NSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A + E L
Sbjct: 67 FYTLKRAYNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAVEYSWELL 126
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
T+ S+P DRLY TYF G ++ GL D E R++W +GVP DHI K NFWEMG
Sbjct: 127 TQV-YSIPADRLYVTYFEGDEKQGLEPDHEARELWRSVGVPDDHILPGNAKDNFWEMGEQ 185
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG SEIHYD G ++A VN D D++E+WN+VF+ + R ++ L +IDT
Sbjct: 186 GPCGPCSEIHYDRIGGRNAA-HLVNQDDPDVLEVWNLVFMQYNREQDRSLKSLPAKHIDT 244
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV++LQ+ S YDTD+F PL + I++++ +PY F + +DT+YR+L+D
Sbjct: 245 GMGFERLVSVLQDVRSNYDTDVFQPLFKAIQEIANVRPYTGKFGAEDVDGIDTAYRVLAD 304
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R +T ALAD P+ + LR ++R + G L + E + D
Sbjct: 305 HVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSRLMPTLIEQVKD 364
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
++PE+ + + IL EE F K L + + E++
Sbjct: 365 IFPEVAKDPSFVAEILDEEEASFS----------KTLDRGEKLFEKY------------- 401
Query: 423 YLTKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
A S TE + G + LYDTYG ++ + +A + L + FE+ E
Sbjct: 402 ------AAAASQTESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQES 455
Query: 480 KERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
E SK + D+ +++ +++ +S +Y F +D ++ + G+Q
Sbjct: 456 YEASKRGGKKDNSDLLKLNVHELSQLNEE---KIAKSDDSSKYGFDNVDGTILKLYDGEQ 512
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
+D I E G+I D T YA GGQ D G + + +
Sbjct: 513 F----------------VDEI-TEPGKKYGIILDNTCFYAEQGGQEYDTGKIIIDDVAEF 555
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
N VE +L + G + H G++V K++ G D R HT +H+LN AL
Sbjct: 556 N--VENVQLYN--GYVFHTGSLVEG-KLSVGDKIIAAYDELRRHPIKNNHTGTHILNYAL 610
Query: 660 RRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
+ L QK V ++ DFS + + LS+D + VE+ N I + + V + +
Sbjct: 611 KETLGNDVDQKGSLVAPEKLRFDFS-HKKALSLDELRNVEEVCNQQIKDNMAVYYKEVPL 669
Query: 719 SELPFLTHLTVIPGEIYPD-----------DVILIDISDKE-NVISREPCCGTHVFNTGH 766
++ + + GE YPD D IL + S++E N S E C GTHV TG
Sbjct: 670 DLAKTISSVRAVFGETYPDPVRVVSVGKPIDEILANPSNEEWNKYSIEFCGGTHVSKTGD 729
Query: 767 IESCTVIGYKSYNHGVRSIKCLTG 790
I+ ++ G+R I ++G
Sbjct: 730 IKYFIILEESGIAKGIRRIVAVSG 753
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + P+ R NSQKCIR GGKHNDL GRD
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFLGTVDPSSEFYTLKRAYNSQKCIRAGGKHNDLEDVGRD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LT+ S+P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAVEYSWELLTQ-VYSIPADRLYVTY 141
>gi|330934785|ref|XP_003304705.1| hypothetical protein PTT_17354 [Pyrenophora teres f. teres 0-1]
gi|311318587|gb|EFQ87206.1| hypothetical protein PTT_17354 [Pyrenophora teres f. teres 0-1]
Length = 966
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 276/840 (32%), Positives = 410/840 (48%), Gaps = 104/840 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R +FLDYF +GHT V SS +VP D ++ F N+GM Q+K++F G A R
Sbjct: 15 VRQTFLDYF-KERGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFQGTVDPSSDFAQLKR 73
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
ANSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A E LT
Sbjct: 74 AANSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIGFTWELLTGV-YG 132
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ RLY TYF G+D GL D E +++W +GVP DHI MK NFWEMG GPCG
Sbjct: 133 IDPQRLYVTYFEGAD--GLEPDLEAKELWKSVGVPEDHILPGDMKDNFWEMGDQGPCGPC 190
Query: 192 SEIHYDMKGEPSSALAR-----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SE+HYD++ EP R VN D ++IEIWN VF+ + R ++ PL +IDTG
Sbjct: 191 SEVHYDLR-EPEGGKYRNVASLVNMDDPEVIEIWNNVFMQYNREPDRSLRPLPNKHIDTG 249
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G+ERLV++LQ+K S YDTD+F PL + I+ ++GA+ Y F + +DT+YR+++D+
Sbjct: 250 MGYERLVSVLQHKKSNYDTDVFTPLFKKIQDITGAREYRGKFGAEDPDGIDTAYRVVADH 309
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
RM++ A+AD P+ + +R V+R + F+ G ++ + E +GD+
Sbjct: 310 VRMMSFAIADGGVPNNVGRGYVVRRVLRRGARYARKYFETDIGDFFSKIVPTLVEQMGDM 369
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PEI+ I IL EE + F K L + G V+ KY
Sbjct: 370 FPEIKKKQQDIIEILDEEEKAFA----------KSLDR--------------GEVIFEKY 405
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
K A+ + GD + LYDTYG ++ + +A + L + + + + +E S
Sbjct: 406 AQK--AKVKGSDALPGDDVWRLYDTYGFPVDLTKLMAEERGLKIDDKEVDDAQEKAREAS 463
Query: 484 KA--KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
K KAA + D+ DL P TDD KY N+ ++
Sbjct: 464 KGDKKAAGALVKFDVHDLGALENMPDVPKTDDSAKYGRE---------------NITSVI 508
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
AI H + + ++ G++ D+TN YA GGQ D G +
Sbjct: 509 ----------KAIYHNKKFLK-STKEVPEGEQFGVLLDRTNFYAEQGGQEYDTGKLLVDG 557
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+ + I + G ++H G + +++ G E D R HT +H+L
Sbjct: 558 EAE----ISIDNVQVYAGYVLHTG-YLKYGELSVGSEVIAEFDELRRHPIRNNHTGTHVL 612
Query: 656 NAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
N ALR VL QK V ++ DFS + LS + VE + I QV +
Sbjct: 613 NYALREVLGNEVDQKGSLVAPEKLRFDFS-HKAGLSDAELDKVESISSKYIKEDAQVYAK 671
Query: 715 HMRASELPFLTHLTVIPGEIYPD-----------DVILIDI-SDKENVISREPCCGTHVF 762
+ + + + + GE YPD + +L D+ ++K +S E C GTHV
Sbjct: 672 DVPLASAKEIRGVRAVFGETYPDPVRVVSVGVPVEELLADVKNEKWEKLSIEFCGGTHVL 731
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQ-ILNVGNIPYG 821
TG I+ ++ G+R I +TG + + AA F + + +G +P+G
Sbjct: 732 KTGEIKELVILEESGIAKGIRRIVAVTGQEAYSV------QRLAAEFQERVEAMGKMPFG 785
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 68/107 (63%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++F G A R ANSQKCIR GGKHNDL G+D
Sbjct: 37 VPLSDPTLLFTNAGMNQYKSIFQGTVDPSSDFAQLKRAANSQKCIRAGGKHNDLDDVGKD 96
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A E LT + RLY T+
Sbjct: 97 SYHHTFFEMLGNWSFGDYFKKEAIGFTWELLTG-VYGIDPQRLYVTY 142
>gi|357140315|ref|XP_003571715.1| PREDICTED: LOW QUALITY PROTEIN: alanyl-tRNA synthetase-like
[Brachypodium distachyon]
Length = 993
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 269/832 (32%), Positives = 419/832 (50%), Gaps = 106/832 (12%)
Query: 4 PNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG 63
P + + ++ +R +F+ Y+ ++ HT SSP+VP D ++ F N+GM QFK VFLG
Sbjct: 36 PPMEASPEWPARRVRETFIQYY-ESKSHTRWPSSPVVPVDDPTLLFANAGMNQFKPVFLG 94
Query: 64 LTPAP------YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDA 117
T AP R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K +A
Sbjct: 95 -TAAPDSQLGRLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEA 153
Query: 118 CRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKC 177
A E LT+ LP DR+Y TYFGG ++ GL D E+++IWL+ +P++ + G K
Sbjct: 154 IGYAWELLTQ-VYKLPTDRIYATYFGGDEKAGLAPDIESKNIWLKY-LPKEKVLPFGCKD 211
Query: 178 NFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVP 237
NFWEMG TGPCG +EIH+D G +A + VN D IEIWN+VFI R + +
Sbjct: 212 NFWEMGDTGPCGPCTEIHFDRIGNRDAA-SLVNNDDPTCIEIWNLVFIQFNREADGALRT 270
Query: 238 LSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGA--KPYGRTFTTSNRTD 295
L ++DTG+GFERL +ILQNK S YDTD+F+PL + I +++G +PY T +
Sbjct: 271 LPAKHVDTGMGFERLTSILQNKMSNYDTDVFMPLFDAIHQLAGVGIQPYSGKVGTDDVGK 330
Query: 296 LDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKEL 352
+D +YR+++D+ R ++ A+AD P + LR ++R A+ KQG L
Sbjct: 331 VDMAYRVVADHIRTLSFAIADGSQPGNEGREYVLRRILRRAVHFGHQKLMAKQG-FFSSL 389
Query: 353 SYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIM 412
+ ++GDV+PE++++ KI+ I+ +E F+N +++K +
Sbjct: 390 VHVFVRVMGDVFPELKENEKKIKDIIKDEEESFENTLAKGYEKFKKAADA--------VK 441
Query: 413 EEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF 472
E G VL SG AF L+DTYG ++ + +A LT+ E F
Sbjct: 442 ENGGAVL------------------SGQDAFILWDTYGYPIDLTEVMAVDYGLTVDMEGF 483
Query: 473 EQKLNELKERS-----KAKAASNVPDIDL---MDLKHFPVTDD--KYKYDYHYDTNSKRY 522
+ E ++++ KA S V D + + + TDD K+++ H+ Y
Sbjct: 484 TLSMEEARQKARNARFKAGGKSIVLDANATAQLRNQGLASTDDSPKFQHKEHHSVVKAIY 543
Query: 523 TFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAG 582
T + + G + F GL+ + T+ YA G
Sbjct: 544 T----GSEFIDTASGAEDF---------------------------GLVLESTSFYAEQG 572
Query: 583 GQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVS---SFKVTPGLTSRVEVDA 639
GQI D G + +G + + G ++H G+ + + ++ G R +VD
Sbjct: 573 GQIYDTG-----SIEGLSGSFTVSNVQVFAGYVLHIGSFMEGSDTKALSVGDEVRCKVDY 627
Query: 640 RMRLGCMRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVE 698
R HT +H+LN ALR VL QK V ++ DFS +G+ + + + +E
Sbjct: 628 NRRTLIAPNHTCTHMLNFALREVLGDHIDQKGSIVLPEKLRFDFS-HGKPVQPEDLRKIE 686
Query: 699 KYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDK-ENV------- 750
+N I +++V R ++ ++ + L + GEIYPD V ++ I K E++
Sbjct: 687 FIVNQQIKEELEVSAREIKLADAKRINGLRAVFGEIYPDPVRVVSIGRKVEDLLANPESK 746
Query: 751 ----ISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
IS E C GTH+ NT + ++ + GVR I +T + + A++
Sbjct: 747 EWLSISTELCGGTHISNTRDAAAFALVXEEGIAKGVRRITAVTAECAFEAMK 798
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 72/108 (66%), Gaps = 8/108 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAP------YPRVANSQKCIRVGGKHNDLSFAGR 871
+P D ++ F N+GM QFK VFLG T AP R N+QKCIR GGKHNDL G+
Sbjct: 71 VPVDDPTLLFANAGMNQFKPVFLG-TAAPDSQLGRLSRACNTQKCIRAGGKHNDLDDVGK 129
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
D+YHHTFFEMLGNWSF DY+K +A A E LT+ LP DR+Y T+
Sbjct: 130 DTYHHTFFEMLGNWSFGDYFKEEAIGYAWELLTQ-VYKLPTDRIYATY 176
>gi|325090131|gb|EGC43441.1| alanyl-tRNA synthetase [Ajellomyces capsulatus H88]
Length = 961
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 269/818 (32%), Positives = 415/818 (50%), Gaps = 90/818 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R++FLD+F GHT V SS +VP D ++ F N+GM Q+K++FLG A R
Sbjct: 17 VRNAFLDFF-KENGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDFATLRR 75
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A R + + LTK
Sbjct: 76 AHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIRYSWDLLTKV-YG 134
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYF G+ G+ D E +++WL +GV DH+ MK NFWEMG GPCG
Sbjct: 135 LNPDRLYVTYFEGNPDAGIGPDLEAKELWLSVGVAEDHLLSGNMKDNFWEMGEQGPCGPC 194
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIHYD G +A VN D +++EIWN VFI + R ++ PL ++DTG+G+ER
Sbjct: 195 SEIHYDRIG-ARNASHLVNQDDPNVLEIWNNVFIQYNREPDKSLRPLPNKHVDTGMGYER 253
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV+ILQNK+S YDTD+F PL E I +++G +PY F + +DT+YR+++D+ R +T
Sbjct: 254 LVSILQNKSSNYDTDVFTPLFEKISEITGCRPYTGKFHEEDTDGIDTAYRVVADHVRTLT 313
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A++D P+ + +R V+R + V+ G ++ + + +GD++PEI+
Sbjct: 314 FAISDGASPNNEGRGYVVRRVLRRGARYARKYLNVEIGGFFSKIVPTLVDQMGDMFPEIR 373
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+ IL EE F K L + + E++ +
Sbjct: 374 RKQTDVMEILDEEEISFA----------KTLDRGERLFEEYALQ---------------- 407
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK--AK 486
A+ ++ G + LYDT+G ++ + +A + LT+ + FE+ + KE SK K
Sbjct: 408 AKQKGSGKLHGADVWRLYDTFGFPVDLTRLMAEERGLTIDNAEFEEARLKSKEASKGQGK 467
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
++V + + DL DD K + + ++ + + + I +
Sbjct: 468 RTADVVKLTVHDLGLLETMDDVPKTN-----DDAKFGRGNITSQIKAIYYNKKF------ 516
Query: 547 AIRHARSGASIDSIQ-LEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
+DS + + G+I D+TN YA GGQ +D G + +GK E+
Sbjct: 517 ----------VDSTKDIPQGEQFGIILDRTNFYAEQGGQENDTGKIII------DGKAEL 560
Query: 606 G--ELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
++ G I+H G + SF V + + E D R HT +H+LN ALR+V
Sbjct: 561 AVEDVQVYGGYILHTGFMKYGSFNVNDSVIA--EYDELRRWPIRNNHTGTHILNFALRQV 618
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L QK V +++ DFS + +S + +E+ D I V + + +
Sbjct: 619 LGDGIEQKGSLVAAEKLRFDFS-HKSAVSDSDLEKIERISTDYIRQNCVVYAKDVPLATA 677
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDK-----ENV-------ISREPCCGTHVFNTGHIES 769
++ + + GE YPD V ++ + + +NV IS E C GTHV TG I+
Sbjct: 678 RGISGVRAVFGETYPDPVRVVSVGVELEEILQNVHDPRWKDISIEFCGGTHVQKTGDIKD 737
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHL 803
++ G+R I +TG+ + + A E G+ L
Sbjct: 738 LVILEESGIAKGIRRIIAVTGEEAHEVQRIAKEFGERL 775
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 39 VPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDFATLRRAHNSQKCIRAGGKHNDLDDVGKD 98
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A R + + LTK L DRLY T+
Sbjct: 99 SYHHTFFEMLGNWSFGDYFKKEAIRYSWDLLTK-VYGLNPDRLYVTY 144
>gi|213404528|ref|XP_002173036.1| alanyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
gi|212001083|gb|EEB06743.1| alanyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
Length = 961
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 272/853 (31%), Positives = 414/853 (48%), Gaps = 114/853 (13%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
+ +RS+F+DYF GHT V SS ++P+ D ++ F N+GM Q+K +FLG A
Sbjct: 11 ANKVRSTFIDYF-KEHGHTFVPSSSVIPFEDPTLLFANAGMNQYKPIFLGTVDPSSSFAK 69
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R NSQKC+R GGKHNDL G+D+YHHT FEMLGNWSF DY+K++A +A + LT+
Sbjct: 70 LKRACNSQKCIRAGGKHNDLEDVGKDNYHHTMFEMLGNWSFGDYFKKEAIPLAWKLLTEV 129
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
L D+LY TYFGG ++ GL D E ++IWLE+G+P + + +K NFWEMG GPC
Sbjct: 130 -FKLNPDQLYVTYFGGHEESGLGPDLEAKNIWLEMGIPPERVIPGNLKDNFWEMGEQGPC 188
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G SEIHYD G S VN D +++EIWNIVF+ R ++ PL +IDTG+G
Sbjct: 189 GPCSEIHYDRIG-GRSVPELVNQDDPNVLEIWNIVFMEFNREKDGSLRPLPNKHIDTGMG 247
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
FERLV+++QNK+S YDTDLF PL + I++++GA+PY + +DT+YR+++D+ R
Sbjct: 248 FERLVSVVQNKSSNYDTDLFAPLFQKIQELTGARPYEGRMGEDDVDGIDTAYRVVADHVR 307
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
+T A++D P+ + LR ++R F G L+ +AE +G+ +P
Sbjct: 308 TLTFAISDGGVPNNEGRGYVLRRILRRGARYVRKKFNTPIGDFFSRLALVVAEQMGEFFP 367
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ + ++ IL EE F + L + + EQ+
Sbjct: 368 EVRSKLEDVKEILDEEEESFS----------RTLDRGEKMFEQY---------------- 401
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE--RS 483
A+ + G + LY+TYG ++ +A L + E F KE R
Sbjct: 402 AAAAQKTESKMLKGMDVWRLYETYGFPVDLTHLMAEEAGLKIDVEGFNAAQAHSKEISRR 461
Query: 484 KAKAASNVPDIDLMD---------LKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
AKA + + +D + P TDD +K+ ++ +
Sbjct: 462 AAKAGGDSATMVTLDIHALGALAKMPEVPKTDDHFKH----------------ESGTINA 505
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+ A+ H SG + + E +G++ D+TN YA GGQ D G +
Sbjct: 506 TV---------KALYHP-SGFQTSTEKFEAGENIGILLDRTNFYAEQGGQEYDTGRITI- 554
Query: 595 NTTQENGKVE--IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+GK+E + + G ++H G + G E D R M HT +
Sbjct: 555 -----DGKLEFRVTNVQVYGGYVLHTG-FCEYGSLNVGDEVICEYDELRRRPLMNNHTVT 608
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
H+LN ALR VL Q+ V ++ DFS + LS+ + VE N IA ++V
Sbjct: 609 HILNFALREVLGEGVDQRGSLVSPEKLRFDFS-HKAALSIKELERVENICNQKIAENLRV 667
Query: 712 DRRHMRASELPF-----LTHLTVIPGEIYPDDVILIDISDKENVISREP----------- 755
A ELP + L + GE+YPD V ++ + + I ++P
Sbjct: 668 -----YAKELPLAISKEIAGLRAVFGEVYPDPVRVVCVGADIDEIIKDPKNEQWRQYSIE 722
Query: 756 -CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILN 814
C GTH+ TG I+ ++ G+R I +T A + + A F Q L+
Sbjct: 723 FCGGTHLPKTGEIKDFVILEESGIAKGIRRIVAVT------AADANQVCRIANEFDQRLD 776
Query: 815 -VGNIPYGDDSIA 826
+ +P+G + A
Sbjct: 777 RLAAMPHGPEKEA 789
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM Q+K +FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 36 IPFEDPTLLFANAGMNQYKPIFLGTVDPSSSFAKLKRACNSQKCIRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHT FEMLGNWSF DY+K++A +A + LT+ L D+LY T+
Sbjct: 96 NYHHTMFEMLGNWSFGDYFKKEAIPLAWKLLTE-VFKLNPDQLYVTY 141
>gi|410079893|ref|XP_003957527.1| hypothetical protein KAFR_0E02390 [Kazachstania africana CBS 2517]
gi|372464113|emb|CCF58392.1| hypothetical protein KAFR_0E02390 [Kazachstania africana CBS 2517]
Length = 956
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 276/814 (33%), Positives = 407/814 (50%), Gaps = 92/814 (11%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++R++FL+YF N++ H +KSSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQKWTATNVRNTFLNYF-NSKEHKFIKSSPVVPFDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
PA R NSQKCVR GGKHNDL G+DSYHHTFFEMLGNWSF DY+K DA
Sbjct: 62 DPASEFYTLKRAYNSQKCVRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKTDAIHY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
A + LT +P DRLY TYF G + GL DEE R +W ++GVP DHI K NFW
Sbjct: 122 AWDLLTNV-YGIPKDRLYVTYFEGDAKQGLEADEEARQLWRDVGVPEDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D D++E+WN+VFI + R S ++ L
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNQDDPDVLEVWNLVFIQYNRESDGSLKSLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F PL I++++GA+ Y F ++ ++DT+Y
Sbjct: 240 KHIDTGMGFERLVSVLQDVRSNYDTDVFQPLFAKIQEITGARSYTGKFGDEDKDNIDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R +T ALAD P+ + LR ++R + G L+ +
Sbjct: 300 RVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
E + D++PE+ + + IL EE F KT E+
Sbjct: 360 EQVKDIFPELTKDPSFLFEILDEEEASF--------------AKTLDRGER--------- 396
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
L KY T A + + G + LYDTYG ++ + +A + L + FE+
Sbjct: 397 -LFEKYAT--TASQTTSKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQ 453
Query: 478 ELKERSK---AKAAS-----NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
E E SK K S NV +++ ++ ++ TDDK KY
Sbjct: 454 ESYEASKRGGKKGGSDLIKLNVHELNELNEENVAKTDDKAKYGTE--------------- 498
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
N+ G ++ G++ + E G+I DKT YA GGQ D G
Sbjct: 499 NIEGTIL-------------KLHDGSNFVNEISEPGKKYGIILDKTCFYAEQGGQEYDTG 545
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ + + N VE +L + G + H G++ K++ G D R H
Sbjct: 546 KIVIDDVAEFN--VENVQLYN--GFVFHTGSLEEG-KLSVGDKIIAAYDELRRFPIKNNH 600
Query: 650 TTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +H+LN AL+ L QK V ++ DFS + + L++D + VEK N I +
Sbjct: 601 TGTHILNLALKETLGNDVDQKGSLVAPEKLRFDFS-HKKALTIDELRDVEKISNQQIKDN 659
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYP------------DDVILIDISDKENVISREPC 756
+ V + + ++ + + GE YP DD++ S++ + S E C
Sbjct: 660 LTVYYKDVPLDLAKQISSVRAVFGETYPDPVRVVSVGVPVDDLLANPTSEEWHKYSVEFC 719
Query: 757 CGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
GTHV T I+ V+ G+R I +TG
Sbjct: 720 GGTHVNKTSDIKYFVVLEESGIAKGIRRIVAVTG 753
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + PA R NSQKC+R GGKHNDL G+D
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFLGTVDPASEFYTLKRAYNSQKCVRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K DA A + LT +P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKTDAIHYAWDLLTN-VYGIPKDRLYVTY 141
>gi|426251127|ref|XP_004019282.1| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase, mitochondrial
[Ovis aries]
Length = 970
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 275/816 (33%), Positives = 408/816 (50%), Gaps = 96/816 (11%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----AP 68
+ ++R +FL++F + GH LV S+ + P GD S+ FVN+GM QFK +FLG + P A
Sbjct: 36 AAAVRDAFLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAG 95
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN-DYYKRDACRMALEFLTK 127
+ RVANSQKCVR GG+H+DL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+
Sbjct: 96 FRRVANSQKCVRAGGRHSDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ 155
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
+P DRL+ +YFGG + GL D E+RD+WL LGVP + G + NFWEMG TGP
Sbjct: 156 V-YGIPEDRLWVSYFGGDPKAGLGPDLESRDVWLNLGVPASRVLSFGPEENFWEMGDTGP 214
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG +EIHYD+ G A L+E+WN+VF+ H R + ++ PL + ++DTG+
Sbjct: 215 CGPCTEIHYDLAG---------GAGAPQLVELWNLVFMQHNREADGSLQPLPQRHVDTGM 265
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ERLV +LQ + STYDTDLF PLL+ I + GA PY ++ +DT+YR+++D+
Sbjct: 266 GLERLVAVLQGRLSTYDTDLFSPLLDAIHQGCGAPPYSGRVGAADEGRIDTAYRVVADHI 325
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++V +AD + P + LR ++R A+ S +V + G + L + E LGD Y
Sbjct: 326 RTLSVCIADGVSPGMSGAPLVLRRILRRAVRFSTEVLQAPSG-FLGSLVPVVVETLGDAY 384
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ S +++ D+ + V + + +T L ++ P V L
Sbjct: 385 PELRRS----------SAQVLDSDSQPGVGR-RVIERTLKRLGPSDVF--PAEVAWSLSL 431
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ L + E+ + DT GL + +E A+ L E +++ L
Sbjct: 432 SGNLGLPLDLVELMLEEKGVQLDTAGLERLAPEE---AQHRALQAEPVQEQGLRL----- 483
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
NV + + + P TDD KY Y Y F + ++ Q++ D
Sbjct: 484 -----NVHALGELQRRGVPPTDDSPKYSYSLRPGGG-YEFSTCEAQVL------QLYTED 531
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
A+ AS+ Q GL+ DKTN YA GGQ D G YL Q++
Sbjct: 532 GTAV------ASVGDGQR-----CGLLLDKTNFYAEQGGQASDRG--YLVLVGQQDVLFP 578
Query: 605 IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL- 663
+ G I+H V + + G ++ VD R R HTT HLLN ALR L
Sbjct: 579 VARAQVCGGFILH--EVAAPEXLRVGDQVQLHVDERFR----EKHTTIHLLNWALREALG 632
Query: 664 TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPF 723
T Q+ + + D + L+ + + AVE + + V +M L
Sbjct: 633 PGTEQRGSHLNPERLRFDVATQA-PLTPEQLRAVEVTVQKAVGRDEAV---YMEEVALAR 688
Query: 724 LTHLTVIPG-----EIYPDDVIL----------IDISDKENV-ISREPCCGTHVFNTGHI 767
H +PG E+YPD V + +D + + + S E CCGTH+ TG I
Sbjct: 689 TAH---VPGLRSLDEVYPDPVRVVSVGVPVAHALDPASRAALHTSVELCCGTHLLRTGAI 745
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+IG G+ + +TG+ ++ A E G+ L
Sbjct: 746 GDLVIIGEFQLVKGITRLLAVTGEQAQQAREVGQSL 781
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 76/107 (71%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG + P A + RVANSQKC+R GG+H+DL GRD
Sbjct: 63 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHSDLEDVGRDL 122
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P DRL+ ++
Sbjct: 123 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPEDRLWVSY 168
>gi|242085328|ref|XP_002443089.1| hypothetical protein SORBIDRAFT_08g008230 [Sorghum bicolor]
gi|241943782|gb|EES16927.1| hypothetical protein SORBIDRAFT_08g008230 [Sorghum bicolor]
Length = 1006
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 265/821 (32%), Positives = 409/821 (49%), Gaps = 103/821 (12%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-- 70
++ +R ++ +F + + HT SSP+VP D ++ F N+GM Q+K VFLG P
Sbjct: 60 TARRVREQYISFFVSKE-HTRWPSSPVVPVDDPTLLFANAGMNQYKPVFLGTAAPDSPLG 118
Query: 71 ---RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K +A A E LT+
Sbjct: 119 RLRRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEAIGWAWELLTQ 178
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
LP DR+Y TYFGG ++ GL D E+++IWL+ +P++ + G K NFWEMG TGP
Sbjct: 179 -VYKLPTDRVYATYFGGDEKSGLAADVESKNIWLKY-LPKEKVLPFGSKDNFWEMGDTGP 236
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG +EIH+D G +A + VN D IEIWN+VFI R + ++ PL ++DTG+
Sbjct: 237 CGPCTEIHFDRIGNRDAA-SLVNNDDPTCIEIWNLVFIQFNREADGSLRPLPAKHVDTGM 295
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVS--GAKPYGRTFTTSNRTDLDTSYRMLSD 305
GFERL +ILQNK S YDTD+F+P+ + I +++ G +PY + + +D +YR+++D
Sbjct: 296 GFERLTSILQNKMSNYDTDVFMPIFDAIHQLAGDGIQPYSGKVGSDDIGKVDMAYRVVAD 355
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R ++ A+AD P + LR ++R A+ K KQG L +++GD
Sbjct: 356 HIRTLSFAIADGSQPGNEGREYVLRRILRRAVHFGHQKLKAKQG-FFSSLVNVFVQLMGD 414
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
V+PE++D+ KI+ I+ +E F+N +++K
Sbjct: 415 VFPELKDNEKKIKDIIRDEEESFENTLAKGYEKFKKAADA-------------------- 454
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+D T +SG AF L+DTYG ++ + +A LT+ E F + E +++
Sbjct: 455 ------VKDNGGTVLSGQDAFVLWDTYGYPIDLTEVMAIDYGLTVDKEGFNASMEEARQK 508
Query: 483 SK-AKAASNVPDIDL-------MDLKHFPVTDDKYKYDY---HYDTNSKRYTFPCLDTNL 531
++ A+ S I L + + TDD K+ + H YT +
Sbjct: 509 ARNARNKSGGKSIALDANATAHLRKQGLASTDDNPKFLWPKEHESVVKAIYT----GSEY 564
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
+ GD+ F GL+ + T+ YA GGQI D G
Sbjct: 565 ITTATGDEDF---------------------------GLVLESTSFYAEQGGQIFDTG-- 595
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKV-TPGLTSRVEVDARMRLGCMRAHT 650
+ G + + G ++H G+ KV + G + +VD R HT
Sbjct: 596 ---SIEGSFGTFNVNNVQVFAGYVLHIGSFAKGSKVLSLGDSVICKVDYNRRTLIAPNHT 652
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H+LN ALR VL QK V ++ DFS +G+ + + + +E +N I +++
Sbjct: 653 CTHMLNFALREVLGDHVDQKGSIVLPEKLRFDFS-HGKPVQPEDLRKIESIVNQQIKDEL 711
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDV-----------ILIDISDKENV-ISREPCC 757
V ++ + + L + GEIYPD V +L D KE + IS E C
Sbjct: 712 GVYALEIKLEDAKRINGLRAVFGEIYPDPVRVVSVGRKVEDLLADPDSKEWLSISTELCG 771
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
GTH+ NT ++ ++ + GVR I +T + A+E
Sbjct: 772 GTHITNTRDAKAFALLSEEGIAKGVRRITAVTAGCATQAME 812
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K VFLG P R N+QKCIR GGKHNDL G+D
Sbjct: 86 VPVDDPTLLFANAGMNQYKPVFLGTAAPDSPLGRLRRACNTQKCIRAGGKHNDLDDVGKD 145
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K +A A E LT+ LP DR+Y T+
Sbjct: 146 TYHHTFFEMLGNWSFGDYFKEEAIGWAWELLTQ-VYKLPTDRVYATY 191
>gi|452979442|gb|EME79204.1| hypothetical protein MYCFIDRAFT_57749 [Pseudocercospora fijiensis
CIRAD86]
Length = 958
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 275/808 (34%), Positives = 396/808 (49%), Gaps = 94/808 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R +F+DYF GHT V S +VP D ++ F N+GM Q+K++FLG A R
Sbjct: 16 VRKTFIDYFGKN-GHTFVPSGSVVPLADPTLLFTNAGMNQYKSIFLGTVDPDSDFAKLKR 74
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
ANSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + E LTK
Sbjct: 75 AANSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIHFSWELLTKV-YG 133
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYF G GL D E R+ W GVP DHI MK NFWEMG GPCG
Sbjct: 134 LSPDRLYVTYFEGKKDAGLEPDTEAREFWRAEGVPDDHILTGDMKDNFWEMGDQGPCGPC 193
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIHYD G ++A VN D ++IEIWN VFI + R ++ PL +IDTG+GFER
Sbjct: 194 SEIHYDRIGGRNAA-DLVNKDDPNVIEIWNNVFIQYNREPDKSLRPLPAKHIDTGMGFER 252
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV+ILQNK S YDTD+F P+ I +++GA+ Y F + +DT+YR+++D+ R++T
Sbjct: 253 LVSILQNKYSNYDTDVFTPIFARIREITGAREYSGKFGDEDVDGIDTAYRVVADHVRLLT 312
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A++D P+ + +R V+R + F G ++ + E +GD++PEI+
Sbjct: 313 FAISDGGIPNNVGRGYVVRRVLRRGARYARKYFNTDIGSFFSKIVPTLVEQMGDMFPEIK 372
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
++ IL EE F KT E N+ E KY K
Sbjct: 373 KKQAEVIEILDEEELSF--------------AKTLDRGE--NMFE--------KYAQKCK 408
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA--K 486
A + + E GD + LYDTYG ++ + +A + L + E + + +E SK K
Sbjct: 409 ANNSKVLE--GDDVWRLYDTYGFPVDLTRLMAEERGLDIIDEDVAKAQEKAREASKGEKK 466
Query: 487 AASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
A +++ +D+ D+ P TDD K+ N+ +
Sbjct: 467 AGTDLVKLDVHDINALEQMADVPKTDDSPKFQR---------------DNITATI----- 506
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
AI H R + ++ G+ D+TN YA GGQ +D G + +
Sbjct: 507 -----KAIYHGRKFLQ-STEEVPKGEQFGVFLDRTNFYAEQGGQENDTGRILIDGEAE-- 558
Query: 601 GKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+++ + G ++H G + + KV + S E D R HT +H+LN AL
Sbjct: 559 --IDVHNVQLYGGYVMHTGYMNYGTLKVGDQVLS--EYDELRRQPIRNNHTGTHILNFAL 614
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R L QK V ++ DFS + + S + +E+ I +V + +
Sbjct: 615 RETLGDDVNQKGSLVAPEKLRFDFS-HKQGCSDAELEKIEELSTGYIRQNSEVYAKDVPL 673
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDI-------------SDKENVISREPCCGTHVFNTG 765
+ + + + GE YPD V ++ I SD NV S E C GTHV NT
Sbjct: 674 ATAKQIEGVRAVFGETYPDPVRVVSIGVPVEDLLEDPKRSDWRNV-SVEFCGGTHVKNTT 732
Query: 766 HIESCTVIGYKSYNHGVRSIKCLTGDSS 793
I+ V+ G+R I +TG ++
Sbjct: 733 EIKDLIVLEESGIAKGIRRIVAVTGQTA 760
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R ANSQKCIR GGKHNDL G+D
Sbjct: 38 VPLADPTLLFTNAGMNQYKSIFLGTVDPDSDFAKLKRAANSQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK L DRLY T+
Sbjct: 98 SYHHTFFEMLGNWSFGDYFKKEAIHFSWELLTK-VYGLSPDRLYVTY 143
>gi|303282971|ref|XP_003060777.1| alanyl-tRNA synthetase [Micromonas pusilla CCMP1545]
gi|226458248|gb|EEH55546.1| alanyl-tRNA synthetase [Micromonas pusilla CCMP1545]
Length = 972
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 265/822 (32%), Positives = 405/822 (49%), Gaps = 108/822 (13%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP--- 70
+ IR +FLD+F ++ H +V SSP+VP+ D ++ F N+GM QFK++FLG P
Sbjct: 13 ANKIRQTFLDFF-ESKEHAVVPSSPVVPHDDPTLLFANAGMNQFKSIFLGKADPKGPLAK 71
Query: 71 --RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT-K 127
R ++QKC+R GGKHNDL G+D+YHHT+FEMLGNWSF D++KR+A A E LT K
Sbjct: 72 LKRATDTQKCIRAGGKHNDLDDVGKDTYHHTYFEMLGNWSFGDFFKREAIHWAWELLTSK 131
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
L RLY +YFGG + GLP D E RDIWLE+ +P + + G + NFWEMG GP
Sbjct: 132 EHYGLDESRLYASYFGGDESQGLPPDLEARDIWLEV-LPPNKVLPFGCEDNFWEMGDVGP 190
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIHYD G +A VNAD + +EIWNIVFI R + PL ++DTG+
Sbjct: 191 CGPCSEIHYDRIGGRDAA-DLVNADDPNCLEIWNIVFIQFNREEGGVLKPLPAKHVDTGM 249
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFER+ +ILQ+K S YDTD+F P+ E I +V+GA PY + + D +YR+++D+
Sbjct: 250 GFERIASILQDKMSNYDTDVFTPIFERIREVTGAPPYTGLLGAEDEGEKDMAYRVVADHI 309
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T A+AD P + + LR V+R A+ + +QG ++L + E+ G V+
Sbjct: 310 RTLTFAIADGAAPGSDGRNYVLRRVLRRAVRFGREKLGAEQG-FFQKLVAVVVELFGHVF 368
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI ++ I+ +E F + ++K + E+ G V
Sbjct: 369 PEIVKHEKRVTDIIADEEESFGRTLLKGIDQFKKIAA--------KAKEDGGAV------ 414
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ G AF L++++G ++ + +A +T+ F+ E +E+S+
Sbjct: 415 ------------VDGAAAFLLWESFGFPIDLTEIMAEENGMTVDTAGFDAAFKEAQEKSR 462
Query: 485 AKA-ASNVPDI------------------DLMDLKH----FPVTDDKYKYDYHYDTNSKR 521
A S+ P + D+ H P TDD KYD
Sbjct: 463 AGGKKSDGPSLLFEAEATSWLQKNGSKWGKAKDIAHAHDAIPFTDDSPKYDG-------- 514
Query: 522 YTFPCLD-TNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYAT 580
P D + +V ++ F + +GL+ D+T+ YA
Sbjct: 515 ---PEADPSAVVKAILTLNGFVESTEGVEGP----------------IGLVLDRTSFYAE 555
Query: 581 AGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
+GGQ+ D+GV TT+ + + E+ G ++H G V +T G T VD
Sbjct: 556 SGGQVCDVGVI----TTENGASLAVNEVKVAAGFVLHSGERVEGEAITVGNTCAARVDYD 611
Query: 641 MRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R HT +H+LN ALR VL QK V ++ DFS + + +S + + VE+
Sbjct: 612 RRANIAPNHTMTHVLNFALRSVLGDGVDQKGSLVDDEKLRFDFS-HNKPMSNNEIKRVEE 670
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDK 747
+ + + + VD R + ++ ++ L + GE+YPD V ++ + S++
Sbjct: 671 IVRERVGASLAVDAREVALADAKTISGLRAVFGEVYPDPVRVVSVGPTIDELLANPGSEE 730
Query: 748 ENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLT 789
S E C GTH+ NT E ++ G+R + T
Sbjct: 731 WTKYSIEFCGGTHLANTSQAEGFVLLEEAGIAKGIRRVVAAT 772
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 71/108 (65%), Gaps = 6/108 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK++FLG P R ++QKCIR GGKHNDL G+D
Sbjct: 38 VPHDDPTLLFANAGMNQFKSIFLGKADPKGPLAKLKRATDTQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLT-KPPVSLPLDRLYFTF 919
+YHHT+FEMLGNWSF D++KR+A A E LT K L RLY ++
Sbjct: 98 TYHHTYFEMLGNWSFGDFFKREAIHWAWELLTSKEHYGLDESRLYASY 145
>gi|383766272|ref|YP_005445253.1| alanyl-tRNA synthetase [Phycisphaera mikurensis NBRC 102666]
gi|381386540|dbj|BAM03356.1| alanyl-tRNA synthetase [Phycisphaera mikurensis NBRC 102666]
Length = 949
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 264/801 (32%), Positives = 392/801 (48%), Gaps = 74/801 (9%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+K +R FLD+F GH +V S+P+VP+GD ++ F N+GM FK FLG A RV
Sbjct: 5 SAKDVRQQFLDFFAQKHGHKVVPSAPVVPHGDPTLLFANAGMNPFKPYFLGEEVATDKRV 64
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSL 132
++QKC+R GGKHNDL GRD+YHHTFFEMLGNWSF DY+K++A R A E L L
Sbjct: 65 CDTQKCIRAGGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYFKKEAIRWAWELLVD-VWGL 123
Query: 133 PLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSS 192
+RL+ TYF G + GL D E RD+WL+L +P + + K NFWEMG TGPCG S
Sbjct: 124 EPERLHATYFEGDEAEGLEPDLEARDLWLQL-LPAERVHPGNKKDNFWEMGDTGPCGPCS 182
Query: 193 EIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERL 252
E+HYD + S A A+VNAD D+IEIWN+VFI R + + PL ++DTG+GFER+
Sbjct: 183 ELHYDGTADLSGA-AKVNADDPDVIEIWNLVFIQFNRSTTGKLEPLPAKHVDTGMGFERI 241
Query: 253 VTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITV 312
V +LQ +S YDTD+F PL E I + +GA PY T D +YR+++D+ R +
Sbjct: 242 VRVLQGHSSNYDTDVFTPLFEAIREATGAGPY----TGELEKPEDVAYRVIADHIRTLVF 297
Query: 313 ALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQD 369
ALAD D + LR ++R A+ +Q EL + GD +PE+++
Sbjct: 298 ALADGAHCDKDGRGYVLRRILRRAVRYGRQTLGQEQ-PFFFELVPAVVANFGDAFPELRE 356
Query: 370 SINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLA 429
+ + + EE F ++ + EL + E G G
Sbjct: 357 RADAVAAEIREEEESFSKTLGRGIQLF--------ELSARRVEEAAGRGGG--------- 399
Query: 430 RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAAS 489
I+ AF L+DTYG ++ + +AA + +T+ E F++ + E + RS+
Sbjct: 400 -----KTIAATDAFQLHDTYGFPLDLTELMAAERGMTVDAEGFDRLMGEARVRSRGGGDG 454
Query: 490 NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK-HAI 548
+ + ++ Y TN G + F ++ H
Sbjct: 455 GE-----------AAAMASLREEVQRGFDAGWYA----GTNFTGFETAEAPFQQNQIHVF 499
Query: 549 RHARSGASIDSIQLEHNAWVG----LIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
R R S+ +A G ++ + YA GGQ+ D G L + G+V
Sbjct: 500 R--RQDDHWLSLTAGESATAGDAVAIVLKMSPFYAEMGGQVGDTGSIQL----RTGGRVA 553
Query: 605 IGELASLEGKIVHFGNVVSSFKVT-PGLTSRVEVDARMRLGCMRAHTTSHLLNAALR-RV 662
+ + + VH G VVS T P + V VD R HT +HLLN +LR RV
Sbjct: 554 VRDTQKVGAVHVHLGEVVSGEVATDPDVILAVAVDLERRRAIEANHTATHLLNRSLRDRV 613
Query: 663 LTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
Q+ V ++ DF+ +G L D +AA+E + IA + V + ++
Sbjct: 614 SDDVQQRGSLVEAERLRFDFN-HGAALGDDELAAIEGDLAAAIAARRGVFSGNAPEAQAR 672
Query: 723 FLTHLTVIPGEIYPDDVILIDI--------SDKENV----ISREPCCGTHVFNTGHIESC 770
+ L + GE YP V ++ + +D +N +S E C GTH NT + +
Sbjct: 673 GIRGLRAVFGEKYPPVVRVVSVGEPVDKLLADPDNAAWEELSVELCGGTHAGNTADLGAF 732
Query: 771 TVIGYKSYNHGVRSIKCLTGD 791
++G ++ GVR + +TG+
Sbjct: 733 ALVGQEAVGKGVRRVTAVTGE 753
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+GD ++ F N+GM FK FLG A RV ++QKCIR GGKHNDL GRD+YHHT
Sbjct: 32 VPHGDPTLLFANAGMNPFKPYFLGEEVATDKRVCDTQKCIRAGGKHNDLEDVGRDTYHHT 91
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+K++A R A E L L +RL+ T+
Sbjct: 92 FFEMLGNWSFGDYFKKEAIRWAWELLVD-VWGLEPERLHATY 132
>gi|322694715|gb|EFY86537.1| alanyl-tRNA synthetase [Metarhizium acridum CQMa 102]
Length = 952
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 265/843 (31%), Positives = 415/843 (49%), Gaps = 96/843 (11%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPA 67
S ++ S +R +F DY +GHT+V S +VPY D ++ F N+GM QFK +FLG
Sbjct: 2 SELKWPSALVREAFFDYM-RQRGHTIVPSGSVVPYDDPTLLFTNAGMNQFKPIFLGTINQ 60
Query: 68 PYP-----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMAL 122
P R A++QK +R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A MA
Sbjct: 61 SDPMANLKRAADTQKVIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEMAW 120
Query: 123 EFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEM 182
E LTK L RLY TYF G+ + GLP D+E + +WL++G+P D I MK NFWEM
Sbjct: 121 EILTKV-YGLDPKRLYATYFEGNKELGLPPDDEAKQLWLDIGMPEDQIVPGDMKDNFWEM 179
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
G GPCG SSEIHYD G ++A VN D ++EIWN+VF+ R ++ PL +
Sbjct: 180 GDQGPCGPSSEIHYDKIGGRNAAHI-VNKDDPMVVEIWNLVFMQFDRQKDGSLKPLPAKH 238
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRM 302
IDTG+GFER+V+ LQ S Y TD F PL + IE+V+G +PY + + +DT+YR+
Sbjct: 239 IDTGMGFERMVSALQETDSNYATDCFTPLFKQIEEVTGVRPYSDKYGKDDADGIDTAYRV 298
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI 359
++D+ R ++ A+ D P++ + +R ++R + + K + G ++ +
Sbjct: 299 IADHIRTLSFAITDGAVPNSDGRGYVIRRILRRGVRYARKYLKAEIGSFFSKILPALVSH 358
Query: 360 LGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
+GD +PE+ I+ IL EE F + L + + + E
Sbjct: 359 MGDQFPELVKKQLDIKEILDEEEEAFA----------RTLDRGEAQFE------------ 396
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
KY K A + ++ GD+ + LYDT+G ++ Q +A + L + +
Sbjct: 397 --KYAAK--AAKNGVKKLDGDVVWRLYDTFGFPVDLTQIMAEERGLEIDEIEVSVAREKA 452
Query: 480 KERSKAKAAS-------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
+E SKA AS +V I +D + TDD K+ +
Sbjct: 453 REASKAVKASVDTFAKLDVHQIAQLDQQKVARTDDDAKF-------------------VK 493
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
G G D + ++ + +L N +G++ DKTN YA +GGQ+ D G
Sbjct: 494 GDSKGKVQLIFDGKSFHNS-------TKELPKNTAIGILLDKTNFYAESGGQVADTGRIV 546
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+ + + ++ ++ + G I+H G + ++ G E D R HT +
Sbjct: 547 IDDVVE----FKVMDVQNYGGFILHSG-YIEYGALSSGDEVICEYDELRRSPIRNNHTGT 601
Query: 653 HLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
H+LN +LR VL QK V +++ DFS + + ++ + +E N+ I ++
Sbjct: 602 HVLNHSLREVLGDDINQKGSLVDNEKLRFDFS-HKSQVKIEELRKIETLSNEYIRRNSKI 660
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGT 759
+ + + + + GE YP+ V ++ I + + ++P C GT
Sbjct: 661 FSKDVDLDLARQIEGVRAVFGETYPNPVRVVSIGMDVDTMLKDPKKQEWRQYSVEFCGGT 720
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNV-GNI 818
HV TG I+ ++ G+R I TGD++ AA FS+ L+V +
Sbjct: 721 HVEQTGLIKDLILVEESGIAKGIRRIIAYTGDAAHQVQRE------AAEFSKKLDVLEAM 774
Query: 819 PYG 821
P+G
Sbjct: 775 PFG 777
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+PY D ++ F N+GM QFK +FLG P R A++QK IR GGKHNDL G+D
Sbjct: 33 VPYDDPTLLFTNAGMNQFKPIFLGTINQSDPMANLKRAADTQKVIRAGGKHNDLDDVGKD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A MA E LTK L RLY T+
Sbjct: 93 SYHHTFFEMLGNWSFGDYFKKEAIEMAWEILTK-VYGLDPKRLYATY 138
>gi|326491819|dbj|BAJ98134.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1004
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 270/821 (32%), Positives = 410/821 (49%), Gaps = 104/821 (12%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP--- 70
S +R F+D+F ++ HT SSP+VP+ D ++ F N+GM Q+K VFLG P
Sbjct: 57 SALVRQVFIDFF-RSRAHTPWPSSPVVPFEDPTLLFANAGMNQYKPVFLGAADPDSPLGR 115
Query: 71 --RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K A A E LT+
Sbjct: 116 LRRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKDQAIAYAWELLTQ- 174
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
LP DR+Y TYFGG D+ GL D +++DIWL+ +P + + G K NFWEMG TGPC
Sbjct: 175 VYKLPTDRIYATYFGGDDKAGLAPDTDSKDIWLKY-LPTERVLPFGCKDNFWEMGDTGPC 233
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G +EIH+D G +A + VN D IEIWN+VFI R + T+ L ++DTG+G
Sbjct: 234 GPCTEIHFDRIGNRDAA-SLVNNDDPTCIEIWNLVFIQFNREADGTLRSLPAKHVDTGMG 292
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGA--KPYGRTFTTSNRTDLDTSYRMLSDY 306
FERL +ILQNK S YDTD+F+PL + I K++GA +PY + + +D +YR+++D+
Sbjct: 293 FERLTSILQNKMSNYDTDVFMPLFDAIHKLAGAGIQPYSGKVGSDDVGKVDMAYRVVADH 352
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R ++ A+AD P + LR ++R A+ KQG L ++GDV
Sbjct: 353 IRTLSFAIADGSRPGNDGREYVLRRILRRAVHFGHQKLMAKQG-FFSSLVDVFVRVMGDV 411
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++D+ I+ I+ EE F++ + +K + E G VL
Sbjct: 412 FPELKDNEKNIKDIIKEEEASFESTLAKGYERFKKAADA--------VKENGGTVL---- 459
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE-- 481
SG AF L+DTY ++ + +A L++ E F + E ++
Sbjct: 460 --------------SGQDAFVLWDTYDYPIDLTEVMAVDFGLSVDMEGFNIAMEEARQKA 505
Query: 482 ---RSKAKAASNVPDIDL---MDLKHFPVTDD--KYKYDYHYDTNSKRYTFPCLDTNLVG 533
R KA S V D + + + T+D K+K++ H YT + +
Sbjct: 506 RNARYKAGGKSIVLDANATSHLRNQGLASTNDSPKFKHEVHSSVVKAIYT----GSEFIA 561
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
GD+ F GL+ + T+ YA GGQI D G
Sbjct: 562 TASGDEDF---------------------------GLVLESTSFYAEQGGQIYDTG---- 590
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVV---SSFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ G + + G ++H G+ + +S ++ G + +VD R HT
Sbjct: 591 -SIEGPTGSFTVNNVQVFAGYVLHIGSFLEGPNSKALSVGDEVKCKVDYTRRTLIAPNHT 649
Query: 651 TSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H+LN ALR VL QK V ++ DFS +G+ + + + +E +N I +++
Sbjct: 650 CTHMLNFALREVLGDHIDQKGSIVLPEKLRFDFS-HGKPVQPEDLRKIEYIVNQQIKDEL 708
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDK-ENV-----------ISREPCC 757
+V + ++ + + L + GEIYPD V ++ I K E++ IS E C
Sbjct: 709 EVSAQEIKLVDAKRINGLRAVFGEIYPDPVRVVSIGRKVEDLLANPESKEWLSISTELCG 768
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
GTH+ NT + +I + GVR I +T + + A++
Sbjct: 769 GTHISNTRDAAAFALISEEGIAKGVRRITAVTAECASQAMK 809
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K VFLG P R N+QKCIR GGKHNDL G+D
Sbjct: 82 VPFEDPTLLFANAGMNQYKPVFLGAADPDSPLGRLRRACNTQKCIRAGGKHNDLDDVGKD 141
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K A A E LT+ LP DR+Y T+
Sbjct: 142 TYHHTFFEMLGNWSFGDYFKDQAIAYAWELLTQ-VYKLPTDRIYATY 187
>gi|407859304|gb|EKG06983.1| alanyl-tRNA synthetase, putative [Trypanosoma cruzi]
Length = 959
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 277/810 (34%), Positives = 400/810 (49%), Gaps = 106/810 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAP------YP 70
+R FL +F +GH V SSP+VP D ++ F+N+GM QFKN+FLG T P
Sbjct: 9 VRQEFLKFF-EQRGHKFVPSSPVVPNNDPTLLFINAGMNQFKNLFLG-TADPNTEFGRLT 66
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R ANSQ C+R GGKHNDL GRD+YHHTFFEMLG+WSF DY+KRDA R A E LT+
Sbjct: 67 RAANSQLCIRAGGKHNDLDDVGRDTYHHTFFEMLGSWSFGDYFKRDAIRWAWELLTEV-Y 125
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP DRLY TYF G + G+ DEE + +WLEL P +H+ K NFWEMG GPCG
Sbjct: 126 KLPKDRLYVTYFEGDPENGIAADEEAKQLWLELVKP-EHVISGNAKDNFWEMGDIGPCGP 184
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SE+H+D G ++A VN + +IEIWN+VF+ +R +VPL K ++DTG+G E
Sbjct: 185 CSEVHFDRLGGRNAA-ELVNKEDPMVIEIWNLVFMQFERHEGGVLVPLPKMHVDTGMGLE 243
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RL +I+Q S YDTD + PL E I+ V+G + N +D +YR+++D+ R +
Sbjct: 244 RLTSIMQGVHSNYDTDAWTPLFEAIQAVTGYEKSYAEIRDQNDSDATVAYRVIADHIRCL 303
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+V+LAD PD+ + LR ++R A+ K G EL + LG + +
Sbjct: 304 SVSLADGAMPDSVGRGFVLRRIIRRAVRYGLQFLGAKVG-FFSELVDAVVASLGPFFTHM 362
Query: 368 QD--SINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
QD ++ +I+ +L +E F K W +G+K+
Sbjct: 363 QDPRTVQRIKTVLADEEASFS-------KTWD---------------------VGLKHFN 394
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE--QKLNELKERS 483
K +A D ISGD AF L+D YG ++ LA L + F K N+L
Sbjct: 395 KAVA-DAVDNTISGDNAFILHDRYGFPVDLTCLLAEKAGLRVDMNGFHATMKANQLSAGR 453
Query: 484 KAKAASNVPDIDLMDLKHFPV--TDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
A A + + L +LK + T+D KY + T +
Sbjct: 454 VAAAKTFLDVHQLEELKQMGIAPTEDAAKYIWKNRTAEVK-------------------- 493
Query: 542 CIDKHAIRHARSGASIDSIQ--LEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
AI + ++G +D + E +GLI D TN YA +GGQI D G
Sbjct: 494 -----AIFNKKTGTFVDMLMPGEEGEEDIGLIMDVTNFYAESGGQIYDTG----RIVAAA 544
Query: 600 NGKVEIGELASLEGKIVHFGNVVS--SFKVTPGLTSRV--EVDARMRLGCMRAHTTSHLL 655
+ E+ ++ +L G +VH G +++ S V +TS V +VD + R+ H+ +H+L
Sbjct: 545 DAVFEVKKVYNLGGYVVHLGRMMTTNSTAVPIPVTSSVDLQVDYKRRIAIAANHSMTHVL 604
Query: 656 NAALRRVL--------TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
N LRRVL QK V + DFS Y +S + +A +EK +N+ I
Sbjct: 605 NWCLRRVLEDEAPESYMEVQQKGSLVTEEMLRFDFS-YNSRVSQEDLAKIEKALNEKIQQ 663
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREP 755
+ V R+ + + + L + GE YPD V +I + S + + E
Sbjct: 664 GLVVYRKEVELEKAKHIVGLRQMFGEKYPDPVSVISVGVPVDDLLAKPESAEWRAYAVEF 723
Query: 756 CCGTHVFNTGHIESCTVIGYKSYNHGVRSI 785
C GTH+ N E ++ ++ GVR I
Sbjct: 724 CGGTHLSNIKEAEVAVILSEEALMKGVRRI 753
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 75/108 (69%), Gaps = 8/108 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAP------YPRVANSQKCIRVGGKHNDLSFAGR 871
+P D ++ F+N+GM QFKN+FLG T P R ANSQ CIR GGKHNDL GR
Sbjct: 31 VPNNDPTLLFINAGMNQFKNLFLG-TADPNTEFGRLTRAANSQLCIRAGGKHNDLDDVGR 89
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
D+YHHTFFEMLG+WSF DY+KRDA R A E LT+ LP DRLY T+
Sbjct: 90 DTYHHTFFEMLGSWSFGDYFKRDAIRWAWELLTE-VYKLPKDRLYVTY 136
>gi|389741925|gb|EIM83113.1| hypothetical protein STEHIDRAFT_149395 [Stereum hirsutum FP-91666
SS1]
Length = 958
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 268/815 (32%), Positives = 395/815 (48%), Gaps = 79/815 (9%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
S IR F +YF ++ HT V+SS +PY D ++ F N+GM Q+K++FLG A
Sbjct: 13 TSSKIREEFFNYF-RSRDHTFVRSSSTIPYEDPTLLFANAGMNQYKSIFLGTVDPLSDLA 71
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + E LT
Sbjct: 72 KLRRAFNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAVHYSWELLTD 131
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
LP DRLY TYF G GL D E R WL+ GV DHI K NFWEMG+TGP
Sbjct: 132 V-FKLPKDRLYVTYFEGDPTAGLEPDLEVRQFWLDQGVADDHILPGNAKDNFWEMGATGP 190
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIHYD G ++A VN D D++EIWN VFI R ++ L ++DTG+
Sbjct: 191 CGPCSEIHYDRIGGRNAAHL-VNQDDPDVLEIWNNVFIQFNREDDGSLKSLPLKHVDTGM 249
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV+++Q+K S YDTD+FLP+ +++++G + Y F + +DT+YR+++D+
Sbjct: 250 GFERLVSVIQDKRSNYDTDVFLPIFARVQELTGVRGYQGKFGEEDDDGIDTAYRVVADHV 309
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T AL+D P+ + LR ++R + V G L + + LG +
Sbjct: 310 RTLTFALSDGGVPNNVGRGYVLRRILRRGARYARKKLGVTIGTFFSSLMPVVVDQLGATF 369
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ + +I+ IL EE F + L + + EQ+
Sbjct: 370 PELTKKLPEIKEILDEEEESFS----------RTLDRGEKLFEQYAAS------------ 407
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
AR+ + E++G + LYDTYG ++ + +A LT+ FE KE SK
Sbjct: 408 ----ARERGVRELNGKDVWRLYDTYGFPVDLTRLMAEELGLTINEREFEAAQASSKEASK 463
Query: 485 A---KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
A K A++V +D+ DL D K D +S +++ ++ + I F
Sbjct: 464 ASQKKHANSVVKLDVHDLATLEKNTDVPKTD-----DSAKFSVGNVEATVKAIYFSKSFF 518
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
S S D+ G+I D+T+ YA +GGQ D G +
Sbjct: 519 --------QTTSNVSEDTS-------FGIILDRTSFYAESGGQEHDTGNIVIDGFAD--- 560
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
E+ + G ++H G + K++ G D R HT +H+LN LR
Sbjct: 561 -FEVTNVQVYNGYVLHIG-YLKYGKLSVGDKVVASYDELRRWPLRNNHTATHILNFCLRE 618
Query: 662 VLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
+L Q+ V + DFS + + ++ + +E N+ + V+V + +
Sbjct: 619 ILGDHIDQRGSLVAPTKLRFDFS-HKAQIPINELVKIESMANEWVKKNVKVYSQELDLKT 677
Query: 721 LPFLTHLTVIPGEIYPDDVILI----DISD--------KENVISREPCCGTHVFNTGHIE 768
++ L + GE YPD V ++ D++D K S E C GTHV TG I+
Sbjct: 678 AQRISGLRAVFGESYPDPVRVVSLEYDVADIAKDVESPKWRSTSIEFCGGTHVARTGDIK 737
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
VI G R I +TG ++ + L
Sbjct: 738 QFVVIEESGIAKGTRRIIAVTGHEAQEVTRQAETL 772
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 39 IPYEDPTLLFANAGMNQYKSIFLGTVDPLSDLAKLRRAFNSQKCIRAGGKHNDLDDVGKD 98
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LT LP DRLY T+
Sbjct: 99 SYHHTFFEMLGNWSFGDYFKKEAVHYSWELLTD-VFKLPKDRLYVTY 144
>gi|71655886|ref|XP_816499.1| alanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
gi|70881631|gb|EAN94648.1| alanyl-tRNA synthetase, putative [Trypanosoma cruzi]
Length = 959
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 277/810 (34%), Positives = 401/810 (49%), Gaps = 106/810 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAP------YP 70
+R FL +F +GH V SSP+VP D ++ F+N+GM QFKN+FLG T P
Sbjct: 9 VRQEFLKFF-EQRGHKFVPSSPVVPNNDPTLLFINAGMNQFKNLFLG-TADPNTEFGRLT 66
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R ANSQ C+R GGKHNDL GRD+YHHTFFEMLG+WSF DY+KRDA R A E LT+
Sbjct: 67 RAANSQLCIRAGGKHNDLDDVGRDTYHHTFFEMLGSWSFGDYFKRDAIRWAWELLTEV-Y 125
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP DRLY TYF G + G+ DEE + +WLEL P +H+ K NFWEMG GPCG
Sbjct: 126 KLPKDRLYVTYFEGDPENGIAADEEAKQLWLELVKP-EHVISGNAKDNFWEMGDIGPCGP 184
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SE+H+D G ++A VN + +IEIWN+VF+ +R +VPL K ++DTG+G E
Sbjct: 185 CSEVHFDRLGGRNAA-ELVNKEDPMVIEIWNLVFMQFERHEDGVLVPLPKMHVDTGMGLE 243
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RL +I+Q+ S YDTD + PL E I+ V+G + N +D +YR+++D+ R +
Sbjct: 244 RLTSIMQDVHSNYDTDAWTPLFEAIQAVTGYEKSYAEIRDQNDSDATVAYRVIADHIRCL 303
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+V+LAD PD+ + LR ++R A+ K G EL + LG + +
Sbjct: 304 SVSLADGAMPDSVGRGFVLRRIIRRAVRYGLQFLGAKVG-FFSELVDAVVASLGPFFTHM 362
Query: 368 QD--SINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
QD ++ +I+ +L +E F K W +G+K+L
Sbjct: 363 QDPRTVQRIKTVLADEEASF-------AKTWD---------------------VGLKHLN 394
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE--QKLNELKERS 483
K +A D ISGD AF L+D YG ++ LA L + F K N+L
Sbjct: 395 KAVA-DAVDNTISGDNAFILHDRYGFPVDLTCLLAEKAGLRVDMNGFHAAMKANQLSAGR 453
Query: 484 KAKAASNVPDIDLMDLKHFPV--TDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
A A + + L +LK + T+D KY + T +
Sbjct: 454 VAAAKTFLDVHQLEELKQMGIAPTEDAAKYIWKNRTAEVK-------------------- 493
Query: 542 CIDKHAIRHARSGASIDSIQ--LEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
AI + ++G +D + E +GLI D TN YA +GGQI D G
Sbjct: 494 -----AIFNKKTGTFVDMLMPGEEGEEDIGLIMDVTNFYAESGGQIYDTG----RIVAAA 544
Query: 600 NGKVEIGELASLEGKIVHFGNVVS--SFKVTPGLTSRV--EVDARMRLGCMRAHTTSHLL 655
+ E+ ++ +L G +VH G +++ S V +TS V +VD + R+ H+ +H+L
Sbjct: 545 DAVFEVKKVYNLGGYVVHLGRMMTTNSTAVPIPVTSSVDLQVDYKRRIAIAANHSMTHVL 604
Query: 656 NAALRRVL--------TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
N LRRVL QK V + DFS Y +S + + +EK +N+ I
Sbjct: 605 NWCLRRVLEDEAPENYMEVQQKGSLVTEEMLRFDFS-YNSKVSQEDLVKIEKALNEKIQQ 663
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREP 755
+ V R+ + + + L + GE YPD V +I + S + + E
Sbjct: 664 GLVVYRKEVELEKAKHIVGLRQMFGEKYPDPVSVISVGVPVDDLLAKPESAEWRAYAVEF 723
Query: 756 CCGTHVFNTGHIESCTVIGYKSYNHGVRSI 785
C GTH+ N E ++ ++ GVR I
Sbjct: 724 CGGTHLSNIKEAEVAVILSEEALMKGVRRI 753
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 75/108 (69%), Gaps = 8/108 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAP------YPRVANSQKCIRVGGKHNDLSFAGR 871
+P D ++ F+N+GM QFKN+FLG T P R ANSQ CIR GGKHNDL GR
Sbjct: 31 VPNNDPTLLFINAGMNQFKNLFLG-TADPNTEFGRLTRAANSQLCIRAGGKHNDLDDVGR 89
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
D+YHHTFFEMLG+WSF DY+KRDA R A E LT+ LP DRLY T+
Sbjct: 90 DTYHHTFFEMLGSWSFGDYFKRDAIRWAWELLTE-VYKLPKDRLYVTY 136
>gi|156838512|ref|XP_001642960.1| hypothetical protein Kpol_1071p9 [Vanderwaltozyma polyspora DSM
70294]
gi|156113543|gb|EDO15102.1| hypothetical protein Kpol_1071p9 [Vanderwaltozyma polyspora DSM
70294]
Length = 957
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 267/810 (32%), Positives = 396/810 (48%), Gaps = 100/810 (12%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGL---TPAPY- 69
+ +R +F DYF ++ HT + SSP+VPY D ++ F N+GM QFK++FLG T Y
Sbjct: 13 ANKVRDTFYDYF-KSKNHTFISSSPVVPYDDPTLLFANAGMNQFKSIFLGTVDPTSKLYD 71
Query: 70 -PRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R NSQKC+R GGKHNDL G+DSYHHT+FEMLGNWSF DY+K DA + + LT
Sbjct: 72 LKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTYFEMLGNWSFGDYFKNDAIVYSWDLLTNV 131
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
+P DRLY +YF G + GL D E RDIW +GVP DHI +K NFWEMG GPC
Sbjct: 132 -YKIPKDRLYVSYFEGDESQGLEPDFEARDIWRSVGVPEDHIVPGNLKDNFWEMGEEGPC 190
Query: 189 GYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
G SSEIHYD + G +S L VN D +++EIWN+VFI + R S + L ++DTG+
Sbjct: 191 GPSSEIHYDRIGGRNASQL--VNKDDPNVLEIWNLVFIQYNRDSERKLKALPAKHVDTGM 248
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV++LQN S YD DLF + + I+ ++ A+ Y F + +DT+YR+L+D++
Sbjct: 249 GFERLVSVLQNVNSNYDIDLFTKIFKRIQAITNAREYTGKFGKYDVDGVDTAYRVLADHA 308
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T AL D P+ + +R ++R + G +L + E ++
Sbjct: 309 RTLTFALTDGCIPNNEGRGYVIRRILRRGARYARKYMNYSIGDFFSKLIPQVIEENKSIF 368
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ N I+ IL EE F KT E+ L
Sbjct: 369 PEVSKDFNYIKEILDEEEASF--------------AKTLDRGEK---------------L 399
Query: 425 TKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
++ A D S + + G + LYDTYG ++ + +A L + FE+ + E
Sbjct: 400 FEKYASDASKLDSKTLDGLQVWRLYDTYGFPVDLTELMAQELGLNIDVPGFERAKKDSYE 459
Query: 482 RSKAKAAS--------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
SK + +V DI ++ P T+DK KY+ T+++
Sbjct: 460 ASKRASKKYDIDLFKLDVHDISKLNTDAVPKTNDKDKYE---------------TTDVMA 504
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
V+ G+ + + + G+I DKT YA GGQI D G +
Sbjct: 505 TVL-------------RIHDGSEFLDVAADKDKKYGVILDKTCFYAEQGGQIYDNGKLII 551
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
T+ N + + G I+H G ++ K++ D R HT +H
Sbjct: 552 DGKTEFN----VENVQEFNGYILHIGTLMDG-KLSTNDKVVASFDELRRFPIRNNHTGTH 606
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
+LN ALR VL QK V ++ DFS + + L++D + +E + +I ++ V
Sbjct: 607 ILNFALRDVLGKDVEQKGSLVTPEKFRFDFS-HKKPLTLDEIKEIEMICDTLIVSKKPVF 665
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTH 760
++++ +E ++ + + GE YPD V ++ I I +P C GTH
Sbjct: 666 YKNVQLNEAKRISSIRAVFGESYPDPVRVVSIGQPVEKILEDPTETNSSEFSIEFCGGTH 725
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
V NT I+ +I G+R I +TG
Sbjct: 726 VANTEDIQKLAIIEETGIAKGIRRITAVTG 755
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGL---TPAPY--PRVANSQKCIRVGGKHNDLSFAGRD 872
+PY D ++ F N+GM QFK++FLG T Y R NSQKCIR GGKHNDL G+D
Sbjct: 38 VPYDDPTLLFANAGMNQFKSIFLGTVDPTSKLYDLKRAYNSQKCIRAGGKHNDLEDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHT+FEMLGNWSF DY+K DA + + LT +P DRLY ++
Sbjct: 98 SYHHTYFEMLGNWSFGDYFKNDAIVYSWDLLTN-VYKIPKDRLYVSY 143
>gi|444722321|gb|ELW63019.1| Alanyl-tRNA synthetase, cytoplasmic [Tupaia chinensis]
Length = 1050
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 259/749 (34%), Positives = 381/749 (50%), Gaps = 69/749 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IRS F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASDIRSRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 EE-FGIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDSKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIH+D G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHFDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYSGKVGADDTDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
+R IT +A + + LR ++R A+ S + +G L + + LGD +
Sbjct: 302 ARTITGPMAAGLTTRGGGEYVLRRILRRAVRYSHEKLNASRG-FFATLVDVVVQSLGDAF 360
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ + ++ I+ EE F +KT L G + L
Sbjct: 361 PELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRIL 392
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKER 482
+++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK +
Sbjct: 393 DRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKSQ 452
Query: 483 SKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
K ++ +D+ + K TDD KY+Y D+ S Y F + V V+
Sbjct: 453 GKGAGGEDLIMLDIYAIEELRAKGLEATDDSPKYNYLSDS-SGNYVF----ESTVATVL- 506
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTNT 596
A+R + + ++ G++ D+T YA GGQ D G + ++
Sbjct: 507 ---------ALRREKMFVA----EVFTGQECGVVLDRTCFYAEQGGQTYDEGYLVKADDS 553
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+++ + + + G ++H G + KV G R+ +D R M HT +H+LN
Sbjct: 554 SEDKTEFTVKNVQVRGGYVLHVGTIYGHLKV--GDQVRLFIDEPRRRPVMSNHTATHILN 611
Query: 657 AALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL QK V D DF+ G +S + E+ N++I V +
Sbjct: 612 FALRCVLGEADQKGSLVAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKPVYTQDC 670
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDIS 745
+ + L + E YPD V ++ I
Sbjct: 671 PLAAAKAIQGLRAVFDETYPDPVRVVSIG 699
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTE-EFGIPVERLYVTY 137
>gi|72389797|ref|XP_845193.1| alanyl-tRNA synthetase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360052|gb|AAX80474.1| alanyl-tRNA synthetase, putative [Trypanosoma brucei]
gi|70801728|gb|AAZ11634.1| alanyl-tRNA synthetase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261328581|emb|CBH11559.1| alanyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
DAL972]
Length = 966
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 286/867 (32%), Positives = 423/867 (48%), Gaps = 123/867 (14%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAP------YP 70
+R F+ +F +GHT V SS +VP+ D ++ F N+GM QFKN+FLG T P
Sbjct: 13 VRQEFVSFF-EQRGHTFVPSSAVVPHNDPTLLFTNAGMNQFKNLFLG-TADPNTDFGRLT 70
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R NSQ C+R GGKHNDL GRD+YHHTFFEMLG+WSF DY+KR+A + E LT+
Sbjct: 71 RAVNSQLCIRAGGKHNDLDDVGRDTYHHTFFEMLGSWSFGDYFKREAILWSWELLTEV-Y 129
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP DRLY TYF G G+ DEE++ +WL+L +P + K NFWEMG GPCG
Sbjct: 130 KLPKDRLYATYFEGDPANGIEADEESKQLWLQL-LPASRVIAGNAKDNFWEMGDVGPCGP 188
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIH+D G +A VN D ++E+WN+VF+ +R + IVPL K ++DTG+G E
Sbjct: 189 CSEIHFDRIGGRDAA-DLVNKDDPMVLEVWNLVFMQFERRAGGVIVPLPKMHVDTGMGLE 247
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSG-AKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
RL +ILQ S YDTD + PL +TI+KV+G K Y + D +YR ++D+ R
Sbjct: 248 RLTSILQGADSNYDTDAWTPLFDTIQKVTGFEKSYAEV--RHDTCDATVAYRAVADHIRC 305
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
+TVALAD PD+ + LR ++R A+ K G +L ++ LG +
Sbjct: 306 LTVALADGAMPDSVGRGFVLRRIIRRAVRYGVQFLGAKVG-FFHQLVDSVVSSLGPFFKH 364
Query: 367 IQD--SINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
IQ+ ++ +I+ +L +E F + W+ G+K+
Sbjct: 365 IQEPRTVQRIKGVLADEETSF-------ARTWE---------------------TGLKHF 396
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
K +A + ISG+ AF L+D YG ++ LA +++ E F + + + S
Sbjct: 397 NKAVAEAVN-NVISGENAFILHDRYGFPVDLTSLLAEKANMSVDLEGFHATM-KASQLSS 454
Query: 485 AKAASNVPDIDLMDLKHFPV-----TDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+ A+ ID+ L+ TDD KY + + F + V +++ D
Sbjct: 455 GRVAAAKTFIDVHQLEELKAGGVSPTDDSAKYTWKKHVAEVKAIFDKKSGSFVDVLLPDS 514
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
+ +G+I D TN YA AGGQI D G
Sbjct: 515 EMGPED----------------------IGIILDVTNFYAEAGGQIYDTGCI----VAAP 548
Query: 600 NGKVEIGELASLEGKIVHFGNV--VSSFKVTP-GLTSRVE--VDARMRLGCMRAHTTSHL 654
+ ++ ++ ++ G IVH G + V P +T+ VE VD RL HT++H+
Sbjct: 549 DAIFDVRKVYNVGGYIVHVGGMRSVEDGAAAPIPVTASVELQVDYERRLPIAANHTSTHI 608
Query: 655 LNAALRRVL--------TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIA 706
LN LRRVL QK V + DFS Y +S++ + VEK IN +I
Sbjct: 609 LNWCLRRVLEEEAKDNFMEVNQKGSLVTPEMLRFDFS-YNNKVSLEDLIKVEKLINQIIQ 667
Query: 707 NQVQVDRRHMR---ASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVI 751
++V R+ + AS + L H+ GE YPD V +I + S++
Sbjct: 668 QGLEVYRKEIALDAASRIAGLRHMF---GEKYPDPVSVISVGVPVEKLIAEPESEEWRAY 724
Query: 752 SREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS------- 804
S E C GTH+ NT + ++ +S G+R + T D+++ A E GK L
Sbjct: 725 STEFCGGTHLSNTQDAQLAVILSEESLMKGIRRMVVATRDAARKAQEGGKALQQEYREIM 784
Query: 805 ---TAASFSQILNVGNIPYGDDSIAFV 828
+ + ++ L+V N GD +I V
Sbjct: 785 SRPASDAVAKSLSVLNKKVGDSAIPLV 811
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 73/108 (67%), Gaps = 8/108 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAP------YPRVANSQKCIRVGGKHNDLSFAGR 871
+P+ D ++ F N+GM QFKN+FLG T P R NSQ CIR GGKHNDL GR
Sbjct: 35 VPHNDPTLLFTNAGMNQFKNLFLG-TADPNTDFGRLTRAVNSQLCIRAGGKHNDLDDVGR 93
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
D+YHHTFFEMLG+WSF DY+KR+A + E LT+ LP DRLY T+
Sbjct: 94 DTYHHTFFEMLGSWSFGDYFKREAILWSWELLTE-VYKLPKDRLYATY 140
>gi|170092939|ref|XP_001877691.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647550|gb|EDR11794.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 955
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 273/826 (33%), Positives = 401/826 (48%), Gaps = 91/826 (11%)
Query: 5 NISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGL 64
N S V S +R F ++F ++ HT V SSP +P+ D ++ F N+GM Q+K++FLG
Sbjct: 3 NSPSTVSWSSARVREEFFNFF-RSKNHTFVPSSPTIPFDDPTLLFANAGMNQYKSIFLGT 61
Query: 65 TP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACR 119
+ R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 62 VDPNSDMSRLKRAFNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAIA 121
Query: 120 MALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNF 179
+ E LT LP DRLY TYF G GL D E + WL+ GV DHI K NF
Sbjct: 122 YSWELLTDV-YKLPKDRLYVTYFEGDPNNGLEPDLEAKQYWLDQGVDEDHILPGNAKDNF 180
Query: 180 WEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLS 239
WEMG+TGPCG +EIH+D G ++A VN D D++EIWN VFI R ++ PL
Sbjct: 181 WEMGATGPCGPCTEIHFDRVGGRNAAHL-VNQDDPDVLEIWNNVFIQFNREDNGSLKPLP 239
Query: 240 KNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTS 299
++DTG+GFERLV+I+Q+K S YDTD+FLP+ + I +++G +PY F + +DT+
Sbjct: 240 SKHVDTGMGFERLVSIVQDKRSNYDTDVFLPIFDKIRELTGVRPYEGRFDADDVDGIDTA 299
Query: 300 YRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNI 356
YR+++D+ R +T AL+D P+ + LR ++R + VK G L +
Sbjct: 300 YRVVADHIRTLTFALSDGGIPNNVGRGYVLRRILRRGARYARKKLGVKIGCFFSSLLPVV 359
Query: 357 AEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
E +G V+PEI ++ I+ IL EE F + L + + +QF
Sbjct: 360 VETMGAVFPEITRKVDDIKEILDEEEESFS----------RTLDRGEKLFDQFATR---- 405
Query: 417 LVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKL 476
A++ + E++G + LYDT+G ++ + +A L + + FE+
Sbjct: 406 ------------AKEQGLKELNGRDVWRLYDTFGFPVDLTRLMAEELGLGVNDQEFEEAQ 453
Query: 477 NELKERSKA---KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCL 527
KE SKA + +++ +D+ D P TDD K++
Sbjct: 454 AWSKEASKASSKQVGTSIVKLDVHDTAALEKDTDIPKTDDSAKFNL-------------- 499
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
N+ +V AI + +S I E A G+I DKT+ YA AGGQ D
Sbjct: 500 -GNIRALV----------KAIFYEKSFPQSTDIMPE-GATFGIILDKTSFYAEAGGQEYD 547
Query: 588 IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMR 647
G + E+ + S G ++H G++ ++ G D R
Sbjct: 548 TGNIVIDGVAD----FEVTNVQSYNGYVLHTGHLKYG-QLAVGKEVISSYDELRRWPLRN 602
Query: 648 AHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIA 706
HT +H+LN LR VL QK V + DFS + +S ++ +E D I
Sbjct: 603 NHTATHILNFCLREVLGDHIDQKGSLVAPTKLRFDFS-HKAQISHSELSRIEATSVDWIK 661
Query: 707 NQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS--------DKENVISR----E 754
V+V + + + L + GE YPD V ++ + D EN R E
Sbjct: 662 RNVKVFSKDLELETASKIPGLRAVFGESYPDPVRVVTLEYDVDEIAKDIENPKWRRTSVE 721
Query: 755 PCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENG 800
C GTHV TG I+ + G+R I +TG + +A +
Sbjct: 722 FCGGTHVARTGDIKDFIITEESGIAKGIRRIVAITGHEAHSAARHA 767
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM Q+K++FLG + R NSQKCIR GGKHNDL G+D
Sbjct: 37 IPFDDPTLLFANAGMNQYKSIFLGTVDPNSDMSRLKRAFNSQKCIRAGGKHNDLEDVGKD 96
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LT LP DRLY T+
Sbjct: 97 SYHHTFFEMLGNWSFGDYFKKEAIAYSWELLTD-VYKLPKDRLYVTY 142
>gi|300121464|emb|CBK21983.2| unnamed protein product [Blastocystis hominis]
Length = 935
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 271/805 (33%), Positives = 399/805 (49%), Gaps = 94/805 (11%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP--- 70
S +R +F+++F +GHT VKSSP+VP D ++ F N+GM Q+K +FLG P
Sbjct: 11 SAKVRQTFIEFF-EERGHTFVKSSPVVPLDDPTLLFANAGMNQYKPIFLGQVDPSSPLAK 69
Query: 71 --RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K A A E LTK
Sbjct: 70 LKRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKEGAINFAWELLTKV 129
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
L RLY TYF GS++ G+PCDEE IW +P DHI K NFWEMG GPC
Sbjct: 130 -YKLDPSRLYATYFEGSEEDGVPCDEEAYAIW-RTHLPDDHILKGNKHDNFWEMGEVGPC 187
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G SEIHYD G ++A VN D +++EIWN+VF+ R S + PL ++DTG+G
Sbjct: 188 GPCSEIHYDRIGGRNAA-DLVNKDDPNVLEIWNLVFMQFSRDSTGALHPLPAKHVDTGMG 246
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
FER+ +ILQNK S YDTD+FLPL + I VSG Y N D +YR+++D+ R
Sbjct: 247 FERITSILQNKMSNYDTDVFLPLFKAIHAVSGVSEYTGLVAGQNGAQKDMAYRVVADHIR 306
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
+T+A+ D P T + LR ++R + + + K K G +L + E + +P
Sbjct: 307 TLTMAITDGAAPSNTGRGYVLRRILRRGVRYGQQILKCKPG-FFSQLVPTVVENMKSAFP 365
Query: 366 EIQDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
E+++ + +Q +IL EE L K L++F E G K +
Sbjct: 366 ELEEKMCFVQEVILDEELSFNRTLEKG--------------LKRFAQEAEACQASGAKVI 411
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN----ELK 480
T GD+AF LY T G ++ + +A L + E F Q + E K
Sbjct: 412 T-------------GDVAFFLYGTLGFPIDLTELMAEEAGLKVDMEGFNQAIERARMEAK 458
Query: 481 ERSKAKAASNVPDIDLMDLKHF-----PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
K A ++ + H PVTDD KY + F L++ +V
Sbjct: 459 TNKKNGAEQTTLVMEAEQVSHLQKSGVPVTDDLPKYTW----------FETLESEVVAFY 508
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
D+ F + I E VG++ +T YA + GQI D G +
Sbjct: 509 GADKSFP---------------EQIAPESGV-VGVVLKQTPFYAESEGQIADRG-----S 547
Query: 596 TTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+ NG + ++ S G ++H G V + ++ +T V+ D R+ + HT +H+
Sbjct: 548 LSGANGSFSVQQVLSYGGYVLHIGVVEQGTLRLHDAVTCSVDYDYRLLIAP--NHTLTHV 605
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
+N ALRRVL T QK V + DF+ + + +S ++ +E+ +N+ + + ++V
Sbjct: 606 MNWALRRVLQTEVDQKGSLVDDQKLRFDFN-HTKAVSPAQLSEIERLVNEKVHDALKVFT 664
Query: 714 RHMRASELPFLTHLTVIPGEI-YPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
+ E + L + GE YP + +D S E C GTH+ N + +
Sbjct: 665 KVCPIDEARKICSLRAVFGEAGYPSNPRWMDYS-------VEFCGGTHLSNLAQAKFFAI 717
Query: 773 IGYKSYNHGVRSIKCLTGDSSKAAV 797
+ S + G+R I +TGD + ++
Sbjct: 718 VEEGSISKGIRRIVAITGDRANESI 742
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K +FLG P R NSQKCIR GGKHNDL G+D
Sbjct: 36 VPLDDPTLLFANAGMNQYKPIFLGQVDPSSPLAKLKRACNSQKCIRAGGKHNDLDDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K A A E LTK L RLY T+
Sbjct: 96 VYHHTFFEMLGNWSFGDYFKEGAINFAWELLTK-VYKLDPSRLYATY 141
>gi|392564303|gb|EIW57481.1| hypothetical protein TRAVEDRAFT_21080 [Trametes versicolor
FP-101664 SS1]
Length = 978
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 276/849 (32%), Positives = 394/849 (46%), Gaps = 111/849 (13%)
Query: 7 SSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP 66
S++ + +R F +YF N + HT V SS +PY D ++ F N+GM Q+K +FLG
Sbjct: 4 STHTDWSASKVREEFFNYFKNRE-HTFVPSSSTIPYDDPTLLFANAGMNQYKGIFLGTVD 62
Query: 67 -----APYPRVANSQKCVRVGGKHNDLSC--------------------AGRDSYHHTFF 101
A R NSQKC+R GGKHND S G+DSYHHTFF
Sbjct: 63 PQSELARLKRAFNSQKCIRAGGKHNDHSQFAALAKIEAAGAWSLATDTYVGKDSYHHTFF 122
Query: 102 EMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWL 161
EMLGNWSF DY+K++A + E LT+ LP D+LY TYF G + GL D E +D WL
Sbjct: 123 EMLGNWSFGDYFKKEAIEYSWELLTEV-YGLPKDQLYVTYFEGDPKAGLEPDLEAKDWWL 181
Query: 162 ELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWN 221
+ GV DHI K NFWEMG+TGPCG SEIHYD G ++A VN D D++EIWN
Sbjct: 182 KTGVAEDHIIPGNAKDNFWEMGATGPCGPCSEIHYDRIGGRNAA-GHVNQDDPDVLEIWN 240
Query: 222 IVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGA 281
VFI R ++ PL ++DTG+GFERLV+++Q+K S YDTD+F P+ I++V+G
Sbjct: 241 NVFIQFNREDDGSLKPLPAKHVDTGMGFERLVSVVQDKRSNYDTDVFQPIFARIQEVTGV 300
Query: 282 KPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISE 338
+PYG F + +DT+YR+++D+ R +T AL+D P+ + LR ++R +
Sbjct: 301 RPYGGKFGDEDENGIDTAYRVIADHVRTLTFALSDGGVPNNVGRGYVLRRILRRGARFAR 360
Query: 339 DVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKP 398
V+ G L + E +G V+PEI +I+ IL EE
Sbjct: 361 KKLGVQIGSFFSSLVPVVVEQMGAVFPEITQKSAEIKEILDEEE---------------- 404
Query: 399 LVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQE 458
E F+ + G L +Y K L E+SG + LYDTYG ++ +
Sbjct: 405 --------ESFSRTLDRGEKLFEQYAQKTL--QSGQKELSGKDVWRLYDTYGFPVDLTRL 454
Query: 459 LAAAKKLTLCHEAFEQKLNELKERSKA---KAASNVPDIDLMDLKHF------PVTDDKY 509
+A L++ FE KE SK K V +D+ D+ P TDD +
Sbjct: 455 MAEELGLSINEAEFEAAQAHSKEASKGGVKKGTGEVVALDVHDIAALEKNDGVPKTDDSF 514
Query: 510 KYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVG 569
K+ G + V K A + ++ A G
Sbjct: 515 KFKQ-------------------GNITAKVVAIYSKKAFLKSTE-------EIPEEASFG 548
Query: 570 LIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTP 629
L+ D+T+ YA +GGQ D G + + E+ + G ++H G++ K+
Sbjct: 549 LLLDRTSFYAESGGQEYDTGSIVIDGVAE----FEVTNVQVYNGYVLHIGHMKYG-KLNI 603
Query: 630 GLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGET 688
G D R HT +H+LN +LR VL QK V + DFS +
Sbjct: 604 GDEIVSSYDELRRWPLRNNHTATHILNYSLREVLGDHIDQKGSLVAPTKLRFDFS-HKAQ 662
Query: 689 LSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILI----DI 744
+S + +E D I V V + + + L + GE YPD V ++ D+
Sbjct: 663 VSTSELTKIESISQDFIKRNVGVYGKELPLHVAQKINSLRAVFGESYPDPVRVVSLEFDV 722
Query: 745 SD--------KENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
D K S E C GTHV TG I+ V G+R + +TG + A
Sbjct: 723 DDIAKDLENPKWRKTSIELCGGTHVARTGEIKDFVVTEESGIAKGIRRVVAVTGHEAAEA 782
Query: 797 VENGKHLST 805
G+ L+
Sbjct: 783 RRLGESLTA 791
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 73/127 (57%), Gaps = 26/127 (20%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLS----- 867
IPY D ++ F N+GM Q+K +FLG A R NSQKCIR GGKHND S
Sbjct: 36 IPYDDPTLLFANAGMNQYKGIFLGTVDPQSELARLKRAFNSQKCIRAGGKHNDHSQFAAL 95
Query: 868 ---------------FAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPL 912
+ G+DSYHHTFFEMLGNWSF DY+K++A + E LT+ LP
Sbjct: 96 AKIEAAGAWSLATDTYVGKDSYHHTFFEMLGNWSFGDYFKKEAIEYSWELLTE-VYGLPK 154
Query: 913 DRLYFTF 919
D+LY T+
Sbjct: 155 DQLYVTY 161
>gi|326519084|dbj|BAJ96541.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1008
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 269/826 (32%), Positives = 417/826 (50%), Gaps = 106/826 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAP------YP 70
+R F+D+F ++ HT SSP+VP D ++ F N+GM QFK VFLG T +P
Sbjct: 64 VREVFIDFF-KSKSHTPWPSSPVVPVDDPTLLFANAGMNQFKPVFLG-TASPDSQLGRLS 121
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K A A E LT+
Sbjct: 122 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEGAIGYAWELLTQV-Y 180
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP DR+Y TYFGG ++ GL D E+++IWL+ +P + + G K NFWEMG TGPCG
Sbjct: 181 KLPTDRIYATYFGGDEKAGLAPDTESKNIWLKY-LPNERVLPFGCKDNFWEMGDTGPCGP 239
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
+EIH+D G +A + VN D IEIWN+VFI R S ++ L ++DTG+GFE
Sbjct: 240 CTEIHFDRIGNRDAA-SLVNNDDPTCIEIWNLVFIQFNRESDGSLRSLPAKHVDTGMGFE 298
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGA--KPYGRTFTTSNRTDLDTSYRMLSDYSR 308
RL +ILQNK S YDTD+F+PL + I +++G +PY + + +D +YR+++D+ R
Sbjct: 299 RLTSILQNKMSNYDTDVFMPLFDAIHQLAGVGIQPYSGKVGSDDVGKVDMAYRVVADHIR 358
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
++ A+AD P + LR ++R A+ KQG L ++GDV+P
Sbjct: 359 TLSFAIADGSQPGNEGREYVLRRILRRAVHFGHQKLMAKQG-FFSSLVDVFVRVMGDVFP 417
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++D+ KI+ I+ +E F+N + +K + E G VL
Sbjct: 418 ELKDNEKKIKDIIKDEEASFENTIAKGYERFKKAADA--------VKENGGAVL------ 463
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS-- 483
SG AF L+DTYG ++ + +A L++ E F + E ++++
Sbjct: 464 ------------SGQDAFVLWDTYGYPIDLTEVMAVDFGLSVDMEGFNASMEEARQKARN 511
Query: 484 ---KAKAASNVPDIDLM-DLKH--FPVTDD--KYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
KA S V D + +L++ T+D K++++ H YT + +
Sbjct: 512 ARYKAGGKSIVLDANATSELRNQGLASTNDSPKFQHEVHSSVVKAIYT----GSEFIATA 567
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
GD+ F GL+ + T+ YA GGQI D G +
Sbjct: 568 SGDEDF---------------------------GLVLESTSFYAEQGGQIYDTG-----S 595
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVS---SFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+G + + G ++H G+ + S ++ G + +VD R HT +
Sbjct: 596 IEGPSGSFTVNNVQVFAGYVLHIGSFLEGPDSKALSVGDEVKCKVDYTRRTLISPNHTCT 655
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
H+LN AL+ VL QK V ++ DFS +G+ + + + +E +N I ++++V
Sbjct: 656 HMLNFALKEVLGDHVDQKGSIVLPEKLRFDFS-HGKPVQPEDLRKIEYIVNKQIKDELEV 714
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDK-ENV-----------ISREPCCGT 759
+ ++ ++ + L + GEIYPD V ++ I K E++ IS E C GT
Sbjct: 715 SAQEIKLADAKRINGLRAVFGEIYPDPVRVVSIGCKVEDLLANPESKEWLSISTELCGGT 774
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST 805
H+ NT + +I + GVR I +T + + A++ + T
Sbjct: 775 HISNTRDAAAFALISEEGIAKGVRRITAVTAECASQAMKLASSIDT 820
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 71/108 (65%), Gaps = 8/108 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAP------YPRVANSQKCIRVGGKHNDLSFAGR 871
+P D ++ F N+GM QFK VFLG T +P R N+QKCIR GGKHNDL G+
Sbjct: 86 VPVDDPTLLFANAGMNQFKPVFLG-TASPDSQLGRLSRACNTQKCIRAGGKHNDLDDVGK 144
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
D+YHHTFFEMLGNWSF DY+K A A E LT+ LP DR+Y T+
Sbjct: 145 DTYHHTFFEMLGNWSFGDYFKEGAIGYAWELLTQ-VYKLPTDRIYATY 191
>gi|71416315|ref|XP_810193.1| alanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
gi|70874690|gb|EAN88342.1| alanyl-tRNA synthetase, putative [Trypanosoma cruzi]
Length = 959
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 276/810 (34%), Positives = 399/810 (49%), Gaps = 106/810 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAP------YP 70
+R FL +F +GH V SSP+VP D ++ F+N+GM QFKN+FLG T P
Sbjct: 9 VRQEFLKFF-EQRGHKFVPSSPVVPNNDPTLLFINAGMNQFKNLFLG-TADPNTEFGRLT 66
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R ANSQ C+R GGKHNDL GRD+YHHTFFEMLG+WSF DY+KRDA R A E LT+
Sbjct: 67 RAANSQLCIRAGGKHNDLDDVGRDTYHHTFFEMLGSWSFGDYFKRDAIRWAWELLTEV-Y 125
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP DRLY TYF G + G+ DEE + +WLEL P +H+ K NFWEMG GPCG
Sbjct: 126 KLPKDRLYVTYFEGDPENGIAADEEAKQLWLELVKP-EHVISGNAKDNFWEMGDIGPCGP 184
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SE+H+D G ++A VN + +IEIWN+VF+ +R +VPL K ++DTG+G E
Sbjct: 185 CSEVHFDRLGGRNAA-ELVNKEDPMVIEIWNLVFMQFERHEGGVLVPLPKMHVDTGMGLE 243
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RL +I+Q S YDTD + PL E I+ V+G + N +D +YR+++D+ R +
Sbjct: 244 RLTSIMQGVHSNYDTDAWTPLFEAIQAVTGYEKSYAEIRDQNDSDATVAYRVIADHIRCL 303
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+V+LAD PD+ + LR ++R A+ K G EL + LG + +
Sbjct: 304 SVSLADGAMPDSVGRGFVLRRIIRRAVRYGLQFLGAKVG-FFSELVDAVVASLGPFFTHM 362
Query: 368 QD--SINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
QD ++ +I+ +L +E F K W +G+K+
Sbjct: 363 QDPRTVQRIKTVLADEEASF-------AKTWD---------------------VGLKHFN 394
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE--QKLNELKERS 483
K +A D ISGD AF L+D YG ++ LA L + F K N+L
Sbjct: 395 KAVA-DAVDNTISGDNAFILHDRYGFPVDLTCLLAENAGLRVDMNGFHAAMKANQLSAGR 453
Query: 484 KAKAASNVPDIDLMDLKHFPV--TDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
A A + + L +LK + T+D KY + T +
Sbjct: 454 VAAAKTFLDVHQLEELKQMGIAPTEDAAKYIWKNRTAEVK-------------------- 493
Query: 542 CIDKHAIRHARSGASIDSIQ--LEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
AI + ++G +D + E +GLI D TN YA +GGQI D G
Sbjct: 494 -----AIFNKKTGTFVDMLMPGEEGEEDIGLIMDVTNFYAESGGQIYDTG----RIVAAA 544
Query: 600 NGKVEIGELASLEGKIVHFGNVVS--SFKVTPGLTSRV--EVDARMRLGCMRAHTTSHLL 655
+ E+ ++ +L G +VH G +++ S V +TS V +VD + R+ H+ +H+L
Sbjct: 545 DAVFEVRKVYNLGGYVVHLGRMMTTNSTAVPIPVTSSVDLQVDYKRRIAIAANHSMTHVL 604
Query: 656 NAALRRVL--------TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
N LRRVL QK V + DFS Y +S + + +EK +N+ I
Sbjct: 605 NWCLRRVLEDEAPENYMEVQQKGSLVTEEMLRFDFS-YNSKVSQEDLVKIEKALNEKIQQ 663
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREP 755
+ V R+ + + + L + GE YPD V +I + S + + E
Sbjct: 664 GLVVYRKEVELEKAKHIVGLRQMFGEKYPDPVSVISVGVPVDDLLAKPESAEWRAYAVEF 723
Query: 756 CCGTHVFNTGHIESCTVIGYKSYNHGVRSI 785
C GTH+ N E ++ ++ GVR I
Sbjct: 724 CGGTHLSNIKESEVAVILSEEALMKGVRRI 753
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 75/108 (69%), Gaps = 8/108 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAP------YPRVANSQKCIRVGGKHNDLSFAGR 871
+P D ++ F+N+GM QFKN+FLG T P R ANSQ CIR GGKHNDL GR
Sbjct: 31 VPNNDPTLLFINAGMNQFKNLFLG-TADPNTEFGRLTRAANSQLCIRAGGKHNDLDDVGR 89
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
D+YHHTFFEMLG+WSF DY+KRDA R A E LT+ LP DRLY T+
Sbjct: 90 DTYHHTFFEMLGSWSFGDYFKRDAIRWAWELLTE-VYKLPKDRLYVTY 136
>gi|402593881|gb|EJW87808.1| alanyl-tRNA synthetase [Wuchereria bancrofti]
Length = 922
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 272/822 (33%), Positives = 396/822 (48%), Gaps = 90/822 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L +R++F+++F + + HT V SS ++P+ D ++ F N+GM Q+K +FLG
Sbjct: 4 LTCDEVRAAFINFFKDRE-HTYVHSSSVIPFDDPTLLFANAGMNQYKPIFLGTVEPSSEM 62
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A R N+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K + C A E LT
Sbjct: 63 AKLKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKLEVCNWAWELLT 122
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K + +P +RLY +YFGG ++ GL DEE R IWL +GVP HI GMK NFWEMG G
Sbjct: 123 KV-LGIPGERLYVSYFGGDEKAGLDADEECRQIWLNIGVPSSHILSFGMKDNFWEMGDVG 181
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G A VNAD ++EIWN+VF+ R ++ L + +ID G
Sbjct: 182 PCGPCSEIHYDRVGN-RDASHLVNADDPMVVEIWNLVFMQFNREEDGSLKQLPRKHIDCG 240
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LGFERLV +LQNK S YDTD+F PL I + +PY + +D +YR+++D+
Sbjct: 241 LGFERLVAVLQNKLSNYDTDIFTPLFSAIHNGTKVRPYSGKVGADDVDGIDMAYRVVADH 300
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R +++AL+D PD T + LR ++R + + + G + L + +LG
Sbjct: 301 IRTLSIALSDGGRPDNTGRGYVLRRILRRGIRYANEKLSAPPG-FLSSLVPTVVNLLGKT 359
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE+ + I+ +E + F +KT L G
Sbjct: 360 FPELHKDPQAVMDIINDEEKQF--------------LKT--------------LSRGRTL 391
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
K +A + GD+A+ LYDTYG ++ Q +A + L + E FE + S
Sbjct: 392 FQKAVAGLQGHNILPGDVAWRLYDTYGFPLDLTQLMAEERGLVVDFEVFENCRQQAAGIS 451
Query: 484 KAKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
A A IDL + K P TDD KY YH ++ T + GI++
Sbjct: 452 AAHANKMRDTIDLDVNAISELKNKGIPATDDSPKYKYHALSSEDEQTLYNFE-KCEGIIL 510
Query: 537 G---DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
D++F +D+ L + LI D+TN YA GGQI D GV
Sbjct: 511 ALRKDKIF---------------LDT--LNSGDFGALILDRTNFYAEQGGQIFDTGVLTE 553
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
+ E + + G +V G V V + ++ D R + M+ HT +H
Sbjct: 554 VDKGSE---FIVSNVQIRGGYVVLVGTVEGELSVGDRVIQAIDEDRRNLI--MKNHTGTH 608
Query: 654 LLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
+LN ALR+V+ QK V D D + + L+ + + VE+ +I +V
Sbjct: 609 VLNFALRKVIGEVEQKGSLVAPDRLRFDLTAK-QPLTSEQIRMVEEESQMLIDTNARVFA 667
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
+ +E + L YPD V ++ + SD + E C GTH+
Sbjct: 668 ENAPLAEARQINGLRA----AYPDPVRIVSVGVPIEELLRNKDSDLAVNTAVEFCGGTHL 723
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
N GHI + ++ G+R I LTG + A+ L
Sbjct: 724 HNVGHIGKLVITVEEAIAKGIRRIIALTGPEASRAIHRADRL 765
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 83/140 (59%), Gaps = 9/140 (6%)
Query: 785 IKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLTP 844
+K LT D +AA N + + + IP+ D ++ F N+GM Q+K +FLG
Sbjct: 1 MKALTCDEVRAAFIN---FFKDREHTYVHSSSVIPFDDPTLLFANAGMNQYKPIFLGTVE 57
Query: 845 -----APYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMA 899
A R N+QKCIR GGKHNDL G+D YHHTFFEMLGNWSF DY+K + C A
Sbjct: 58 PSSEMAKLKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKLEVCNWA 117
Query: 900 LEFLTKPPVSLPLDRLYFTF 919
E LTK + +P +RLY ++
Sbjct: 118 WELLTK-VLGIPGERLYVSY 136
>gi|353240909|emb|CCA72755.1| probable ALA1-alanyl-tRNA synthetase, cytosolic [Piriformospora
indica DSM 11827]
Length = 967
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 275/815 (33%), Positives = 399/815 (48%), Gaps = 95/815 (11%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQ-------FKNVFLGLT 65
+ +R +++++F +GHT SS +P+ D ++ F N+GM Q +K VFLG
Sbjct: 11 TANKVRKTYIEFF-EGKGHTFWPSSSTIPFEDPTLLFANAGMNQACLSRPIYKAVFLGTV 69
Query: 66 P-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
+ R NSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+KR+A
Sbjct: 70 DPNSDMSKLKRAVNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKREALSW 129
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
A E LT+ LP DRLY +YF G + GL DEET+ IWL++GVP D I K K NFW
Sbjct: 130 AWELLTEV-YKLPADRLYVSYFEGDPKQGLLPDEETKQIWLDMGVPEDRIVKGNAKDNFW 188
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG+TGPCG SEIHYD G ++A VNAD +++EIWN VFI + R ++ L
Sbjct: 189 EMGATGPCGPCSEIHYDRIGGRNAAHI-VNADDPNVVEIWNNVFIQYNREEDGSLKSLPA 247
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
++DTG+GFERLV+ +Q+ S YDTD+F P+ + I++VSGA+PY F + +DT+Y
Sbjct: 248 KHVDTGMGFERLVSAIQDVLSNYDTDVFRPIFDRIQEVSGARPYTGKFGADDVDGIDTAY 307
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+++D+ R +T AL+D P + LR ++R + V+ G +S +
Sbjct: 308 RVVADHVRTLTFALSDGGIPSNVGRGYVLRRILRRGARYARKKLGVQIGSFFSSVSPVLV 367
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ LGD +PE++ S +++ +L EE F +T E+
Sbjct: 368 QQLGDFFPELKRSPEEVKKLLDEEEASF--------------ARTLDRGER--------- 404
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
L Y+ K R+ T + G + LYDTYG ++ + +A LT+ EAF
Sbjct: 405 -LFDGYVAK--TREGGGTVLDGKDVWRLYDTYGFPVDLTRLMAEELNLTVDEEAFLAAQA 461
Query: 478 ELKERSKAKAASNVPDI------DLMDLKHFP---VTDDKYKYDYHYDTNSKRYTFPCLD 528
KE SK D D+ L++ P +T+D +K +H + S D
Sbjct: 462 HSKEASKGAGKVGAKDTVKLDVHDIGALENNPDVTITNDSFK--FHTGSVSATIKAIYYD 519
Query: 529 TNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI 588
N S A I + A G+I D+T YA AGGQ D
Sbjct: 520 KNF-------------------PSSTADIPA-----GAPFGIILDQTCFYAEAGGQEYDT 555
Query: 589 GVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA 648
G + ++ + K E+ S +G ++H G + ++ G + D R
Sbjct: 556 G-SIASDVKDQEAKFEVVNCQSFKGYVLHIGQMEEG-SLSVGDSVIATYDPDRRRPIRSN 613
Query: 649 HTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
HT +H+LN LR VL QK V + DFS + ++ + +E+ D I
Sbjct: 614 HTATHILNYGLREVLGDHIDQKGSLVAPSKLRFDFS-HKAQVTTSELQKIEEICIDWIKK 672
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS--------DKENVISR----EP 755
V V + + + L + GE YPD V ++ + D EN R E
Sbjct: 673 DVPVFSKELDLKSARVIPGLRAVFGETYPDPVRVVTLEYDVDEIAKDLENPKWRGTSVEF 732
Query: 756 CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
C GTHV TG I+ T++ G+R I +TG
Sbjct: 733 CGGTHVAKTGDIKEFTIMEESGIAKGIRRIIAVTG 767
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 72/114 (63%), Gaps = 13/114 (11%)
Query: 818 IPYGDDSIAFVNSGMCQ-------FKNVFLGLTP-----APYPRVANSQKCIRVGGKHND 865
IP+ D ++ F N+GM Q +K VFLG + R NSQKCIR GGKHND
Sbjct: 37 IPFEDPTLLFANAGMNQACLSRPIYKAVFLGTVDPNSDMSKLKRAVNSQKCIRAGGKHND 96
Query: 866 LSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
L GRDSYHHTFFEMLGNWSF DY+KR+A A E LT+ LP DRLY ++
Sbjct: 97 LEDVGRDSYHHTFFEMLGNWSFGDYFKREALSWAWELLTE-VYKLPADRLYVSY 149
>gi|255084804|ref|XP_002504833.1| alanyl-tRNA synthetase [Micromonas sp. RCC299]
gi|226520102|gb|ACO66091.1| alanyl-tRNA synthetase [Micromonas sp. RCC299]
Length = 945
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 266/802 (33%), Positives = 404/802 (50%), Gaps = 96/802 (11%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP--- 70
++ IR +FLD+F + HT+V SSP+VP+ D ++ F N+GM QFK FLG P
Sbjct: 9 AQRIRQTFLDFFEGKE-HTVVPSSPVVPHDDPTLLFANAGMNQFKPCFLGTADPKGPLAK 67
Query: 71 --RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R ++QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF D++K +A A E LTK
Sbjct: 68 LKRATDTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDFFKEEAIGWAWELLTKV 127
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
+ LP DRLY TYFGG GLP D+E ++IWL+ +P + K NFWEMG GPC
Sbjct: 128 YM-LPEDRLYATYFGGDPAQGLPPDDEAKEIWLKY-LPPHKVLPFDCKDNFWEMGDVGPC 185
Query: 189 GYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
G +EIHYD + G +S L VN D + +EIWN+VFI R + PL ++DTG+
Sbjct: 186 GPCTEIHYDRIGGRDASDL--VNMDDPNCLEIWNVVFIQFNREEGGVLKPLPAKHVDTGM 243
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +ILQ K S YDTD+F+P+ + I+ V+GA+PY + + D +YR+++D+
Sbjct: 244 GFERLASILQGKMSNYDTDVFMPIFDAIQAVTGAEPYAGKLGAEDVGEKDMAYRVVADHV 303
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T A+AD P + + LR V+R A+ + KQG L + ++ GDV+
Sbjct: 304 RTLTFAIADGAAPGSDGRNYVLRRVLRRAVRFGREKLGAKQG-FFATLVKTVVQLFGDVF 362
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI ++ I+ EE F V+++K +
Sbjct: 363 PEIVKEEKRVTEIIAEEEESFGRTLLKGVEQFKKIAAK---------------------- 400
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
K+ RD +SG AF L++++G ++++ + + + + FE+ E +E+S+
Sbjct: 401 AKEEGRD----TVSGAEAFLLWESFGFPVDLVEIMCEENGMKVDNAGFEEAFKEAQEKSR 456
Query: 485 AKAASNVPDIDLMDLKH--------FPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
A L + + P+TDD +KY + LD G V
Sbjct: 457 AAGKKGGGRQLLFEAEATAWLANNGVPLTDDSHKYAAGSVPEATVKAILTLD----GFV- 511
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
S ++++ +GL+ DKT+ YA +GGQ+ D+GV +
Sbjct: 512 ------------------ESTENVE----GPIGLVLDKTSFYAESGGQVCDVGV---IKS 546
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+ VE ++A+ G ++H + V V G R VD R M HT +H LN
Sbjct: 547 GSASATVEDTKVAA--GFVLHSCDSVDG-AVAVGDAVRCLVDYDRRANIMPNHTMTHCLN 603
Query: 657 AALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
ALRRVL + QK V ++ DFS + + ++ D + VE + D + ++ V R
Sbjct: 604 YALRRVLGDSVDQKGSLVDDEKLRFDFS-HSKAMTPDEIEKVEALVRDQVNAKLAVHTRE 662
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHVFN 763
+ ++ ++ L + GE+YPD V ++ + S+ S E C GTH+ N
Sbjct: 663 VALAKAKEISGLRAVFGEVYPDPVRVVSVGPSIDDLLGAPASEDWKGYSIEFCGGTHLAN 722
Query: 764 TGHIESCTVIGYKSYNHGVRSI 785
T ++ + GVR I
Sbjct: 723 TSDAADFVLLSEEGIAKGVRRI 744
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK FLG P R ++QKCIR GGKHNDL G+D
Sbjct: 34 VPHDDPTLLFANAGMNQFKPCFLGTADPKGPLAKLKRATDTQKCIRAGGKHNDLDDVGKD 93
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF D++K +A A E LTK + LP DRLY T+
Sbjct: 94 TYHHTFFEMLGNWSFGDFFKEEAIGWAWELLTKVYM-LPEDRLYATY 139
>gi|219125523|ref|XP_002183027.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405302|gb|EEC45245.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 959
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 269/816 (32%), Positives = 404/816 (49%), Gaps = 89/816 (10%)
Query: 10 VRLCSKSIRSSFLDYFCNT-QGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAP 68
V + +RS+F+D+F + HT +SS P D ++ F N+GM QFK VFLG
Sbjct: 6 VVWTTDKVRSTFIDFFEQEPRSHTFQRSSACAPLNDPTLLFTNAGMNQFKPVFLGQVDPN 65
Query: 69 YP-----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALE 123
P R NSQKC+R GGKHNDL GRD+YHHTFFEMLG+WSF DY+K++A A +
Sbjct: 66 SPLANVQRAVNSQKCIRAGGKHNDLEDVGRDTYHHTFFEMLGSWSFGDYFKKEAIDYAWQ 125
Query: 124 FLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMG 183
LT+ L DRLY TYF G D GL D E RD+WL +P + ++ NFWEMG
Sbjct: 126 LLTE-VYRLDPDRLYATYFQGDDALGLAPDFEARDLWLRY-LPAARVIGCDVRDNFWEMG 183
Query: 184 STGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYI 243
GPCG SEIHYD G +A A VNAD +IEIWNIVFI + R D + L +I
Sbjct: 184 EVGPCGPCSEIHYDRIGNRDAA-AFVNADDPQVIEIWNIVFIQYNR-EPDKLQTLPAKHI 241
Query: 244 DTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRML 303
DTG+G ERLV+ILQNK S YD D+F PL + + PY T + DT+YR +
Sbjct: 242 DTGMGLERLVSILQNKDSNYDIDVFQPLFAKLATHTDRGPYTGRVGTDDVDLKDTAYRAI 301
Query: 304 SDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL 360
+D++R + A+AD P+ + LR ++R A + + G L + E
Sbjct: 302 ADHARTLAFAIADGAVPNNEGRGYVLRRILRRATRYGQQILHCAPG-FFATLIPVVVETF 360
Query: 361 GDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
G+ YPE++ + + I I+ EE + F ++ +K + L + EL++ ++
Sbjct: 361 GETYPELRAAESTILEIVQEEEQAFGDMLDRGIKFFTEL---EGELKENKVL-------- 409
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
EISG+ AF +YDT G ++ + +A L++ F + K
Sbjct: 410 ---------------EISGEKAFFMYDTLGFPVDLTELMAQEAGLSVDMAGFANAMETQK 454
Query: 481 ERS----KAKAASNVPDID--------LMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLD 528
RS K A N P ++ L+D P TDD +KY + + D
Sbjct: 455 TRSRQAQKTARAGNAPVLELVAEQTAWLVDQNVLP-TDDGFKYKWDVQLPATVMALYGKD 513
Query: 529 TNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI 588
L G DQ +VG++ DK++ YA AGGQ D+
Sbjct: 514 GFLTGDSTADQ-------------------------GDFVGIVLDKSSFYAEAGGQEADV 548
Query: 589 G-VAYLTNTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCM 646
G + +L G+ + ++ G ++H G V S V + +V+ + R +
Sbjct: 549 GTLEFLDEAGTITGRFTVTDVQVYAGFLLHKGAVEEGSIAVDQAVNCKVDYERRRMIAP- 607
Query: 647 RAHTTSHLLNAALRRVL--TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
H+ +H+LNAALR VL C Q+ +++ DF+ + +++ + AVE++
Sbjct: 608 -NHSMTHVLNAALRNVLGEKCD-QRGSLCNNEKLRFDFA-HKRAMTMLEIKAVEEFCQKS 664
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNT 764
+A+ V + M ++ + + + GE+YPD V +I I D +V E C GTH+ NT
Sbjct: 665 VADAQPVKSKVMSLADAQAIDGVRAVFGEVYPDPVRVIAIGDSSSV---EFCGGTHLENT 721
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENG 800
E+ ++ + G+R + +T D++K A+ G
Sbjct: 722 AEAEAFVLVEETAVAKGIRRVTAVTKDAAKRALAGG 757
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 69/106 (65%), Gaps = 6/106 (5%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRDS 873
P D ++ F N+GM QFK VFLG P R NSQKCIR GGKHNDL GRD+
Sbjct: 38 PLNDPTLLFTNAGMNQFKPVFLGQVDPNSPLANVQRAVNSQKCIRAGGKHNDLEDVGRDT 97
Query: 874 YHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K++A A + LT+ L DRLY T+
Sbjct: 98 YHHTFFEMLGSWSFGDYFKKEAIDYAWQLLTE-VYRLDPDRLYATY 142
>gi|75858922|ref|XP_868801.1| hypothetical protein AN9419.2 [Aspergillus nidulans FGSC A4]
gi|40747680|gb|EAA66836.1| hypothetical protein AN9419.2 [Aspergillus nidulans FGSC A4]
Length = 981
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 275/839 (32%), Positives = 415/839 (49%), Gaps = 112/839 (13%)
Query: 5 NISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG- 63
N+ S + SK +R +FL YF +GHT V SSP+ P D ++ F N+GM QFK++FLG
Sbjct: 4 NLQSQPKWTSKLVRDTFLQYF-QGKGHTFVASSPVAPLSDPTLLFTNAGMNQFKSIFLGT 62
Query: 64 LTP----APYPRVANSQK--CVRVGGKHN------------------DLSCAGRDSYHHT 99
+ P A NSQK C+R GGKHN DL G+DSYHHT
Sbjct: 63 VNPNSDFAQLKSAVNSQKMQCIRAGGKHNVGWHPVQAGQVFANICEQDLDDVGKDSYHHT 122
Query: 100 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDI 159
FFEMLGNWSF DY+K++A + + E LT+ L RLY TYF G+ + GL D E + +
Sbjct: 123 FFEMLGNWSFGDYFKKEAIQYSWELLTQV-YGLDPGRLYVTYFEGNKEGGLQPDLEAKAL 181
Query: 160 WLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEI 219
W +GVP DHI MK NFWEMG GPCG SEIHYD G ++A + VN D +++EI
Sbjct: 182 WKAVGVPEDHILPGNMKDNFWEMGDQGPCGPCSEIHYDRIGGRNAA-SLVNQDDPNVLEI 240
Query: 220 WNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVS 279
WN VFI + R + ++ L ++DTG+GFERLV++LQ+K+S YDTD+F P+ +TI+ ++
Sbjct: 241 WNNVFIQYNRENDGSLRSLPNKHVDTGMGFERLVSVLQDKSSNYDTDVFGPIFQTIQVIT 300
Query: 280 GAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLI 336
GA+ Y F T + +DT+YR+++D+ R + A++D + P+ + +R V+R
Sbjct: 301 GAREYQGRFGTDDSDGIDTAYRVVADHVRTLMFAISDGVVPNNEGRGYVIRRVLRRGARY 360
Query: 337 SEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEW 396
+ F V+ G ++ + E LGD++PE++ + IL EE F
Sbjct: 361 ARKYFNVEIGSFFSKIVPTVVEQLGDMFPELKQKQQDVIEILNEEEISFA---------- 410
Query: 397 KPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNII 456
K L + + + EQ+ Q A+ ++ G + LYDT+G ++
Sbjct: 411 KTLDRGERQFEQY----------------AQQAKTAGDHKLHGADVWRLYDTFGFPVDLT 454
Query: 457 QELAAAKKLTLCHEAFEQKLNELKERSKA--KAASNVPDIDLMDLKHF------PVTDDK 508
+ +A + L + FE+ ++ KE SK K + +D+ DL P TDD
Sbjct: 455 RIMAEERGLEIDDRQFEEARHKAKEASKGQKKTTTGSVKLDVHDLGKLEKMNGVPKTDDS 514
Query: 509 YKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWV 568
K++ IG+ I AI H ++ S + L+ + +
Sbjct: 515 AKFE-----------------------IGNVTAQI--KAIYHGKTFHS-STQNLDDSEQI 548
Query: 569 GLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNV-VSSFKV 627
G+I D+TN YA GGQ +D G + + +E+ ++ G ++H G + SFKV
Sbjct: 549 GIILDRTNFYAEQGGQENDTGRIVIDGQAE----LEVVDVQQYAGYVLHTGYMKYGSFKV 604
Query: 628 TPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYG 686
T E D R HT +H+LN ALR VL QK V +++ DFS
Sbjct: 605 DD--TVICEYDELRRWPIRNNHTGTHILNFALRGVLGDGIEQKGSLVSAEKLRFDFSHKS 662
Query: 687 ETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISD 746
V+ V +E I V + + S + + + GE YPD V ++ +
Sbjct: 663 PVTDVELV-KIEDLSTQYIRRNCLVYSKEVPLSIARNIAGVRAVFGETYPDPVRVVSVGA 721
Query: 747 KENVI------------SREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
+ + I S E C GTHV TG I+ ++ G+R I +TG+ +
Sbjct: 722 ELDEILKNVEDPRWADFSIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDA 780
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 71/126 (56%), Gaps = 26/126 (20%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQK--CIRVGGKHN------- 864
P D ++ F N+GM QFK++FLG + P A NSQK CIR GGKHN
Sbjct: 39 PLSDPTLLFTNAGMNQFKSIFLGTVNPNSDFAQLKSAVNSQKMQCIRAGGKHNVGWHPVQ 98
Query: 865 -----------DLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLD 913
DL G+DSYHHTFFEMLGNWSF DY+K++A + + E LT+ L
Sbjct: 99 AGQVFANICEQDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIQYSWELLTQ-VYGLDPG 157
Query: 914 RLYFTF 919
RLY T+
Sbjct: 158 RLYVTY 163
>gi|367043852|ref|XP_003652306.1| hypothetical protein THITE_2113640 [Thielavia terrestris NRRL 8126]
gi|346999568|gb|AEO65970.1| hypothetical protein THITE_2113640 [Thielavia terrestris NRRL 8126]
Length = 959
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 277/836 (33%), Positives = 411/836 (49%), Gaps = 90/836 (10%)
Query: 10 VRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPY 69
VR +R +FLD+F +GHT+V SS +VP+ D ++ F N+GM QFK VFLG
Sbjct: 4 VRWTGPLVRKTFLDFFAE-KGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPVFLGTIGKTE 62
Query: 70 P-----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEF 124
P R ++QKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + E
Sbjct: 63 PIAQLKRAVDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEWSWEL 122
Query: 125 LTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGS 184
LTK L +RLY TYF G+ L D E + +WL++GVP DHI MK NFWEMG
Sbjct: 123 LTKV-YGLDPNRLYVTYFEGNPDLNLEPDLEAKQLWLQVGVPEDHILPGNMKDNFWEMGD 181
Query: 185 TGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
GPCG SEIHYD G ++A VN D ++EIWN VF+ R T+ PL +ID
Sbjct: 182 QGPCGPCSEIHYDKLGGRNAA-HLVNQDDPLVVEIWNNVFMQFDRQKDKTLKPLPAKHID 240
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
TG+GFERLV+ LQ+K S Y TD+F PL I++V+GA+PY + + +DT+YR+ +
Sbjct: 241 TGMGFERLVSALQDKLSNYATDIFTPLFARIQEVTGARPYSDKYGKDDVDGIDTAYRVAA 300
Query: 305 DYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D+ R++ A+AD P+ +R V+R + + F + G + + E +G
Sbjct: 301 DHIRLLAFAIADGAAPNNIGRGYVVRRVLRRGVRYARKYFHAEIGSFFSSILPALVEQMG 360
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
D +PE++ N I+ IL EE F AV L + + + E++
Sbjct: 361 DQFPELKKKQNDIKEILDEEEVAF------AV----TLDRGEKQFEKY------------ 398
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
LA ++SG + LYDT+G +++ + +A + LT+ E + +E
Sbjct: 399 ----ASLAVKAGNNKLSGADVWRLYDTFGFPEDLTKLMAEERGLTIDEAEVEVAREKARE 454
Query: 482 RSKA--KAASNVPDIDLMDLKH------FPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
SKA +A P +++ + P D + KY DT K +
Sbjct: 455 ASKAVKEAVQTFPKLNVHQIAELENTIKLPRPDSEAKYQ-KGDTKGK----------VQL 503
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
I G++ K +L +G++ DKTN YA +GGQ+ D G +
Sbjct: 504 IFTGNEFRTTSK---------------ELPPKTPLGVLLDKTNFYAESGGQVADTGRILI 548
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
+ ++ ++ G IVH G + ++T G E D R HT +H
Sbjct: 549 DGVAE----FKVLDVQEYGGYIVHNG-YLEYGELTAGDEVICEYDELRRQPIRNNHTGTH 603
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
+LN ALR VL +QK V D+ DFS + +S++ + +E N+ I ++
Sbjct: 604 ILNHALREVLGDEVHQKGSLVDQDKLRFDFS-HKSQVSLEEIKKIEDMSNEDIRKNLKTY 662
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDIS-DKENV-----------ISREPCCGTH 760
+ + + + + GE YP+ V ++ I D + + IS E C GTH
Sbjct: 663 YKDVDLDLARQIEGVRAVFGETYPNPVRVVSIGVDVDELLKNPKNPEWRKISVEFCGGTH 722
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVG 816
V TG I+ +I G+R I TGD + A + K S + L+ G
Sbjct: 723 VDATGIIKDLIIIEESGIAKGIRRIVAYTGDGAHQAQRDAKVFSEKLDHIEALDFG 778
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK VFLG P R ++QKCIR GGKHNDL G+D
Sbjct: 33 VPHNDPTLLFTNAGMNQFKPVFLGTIGKTEPIAQLKRAVDTQKCIRAGGKHNDLDDVGKD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK L +RLY T+
Sbjct: 93 SYHHTFFEMLGNWSFGDYFKKEAIEWSWELLTK-VYGLDPNRLYVTY 138
>gi|392597601|gb|EIW86923.1| hypothetical protein CONPUDRAFT_115791 [Coniophora puteana
RWD-64-598 SS2]
Length = 953
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 271/823 (32%), Positives = 400/823 (48%), Gaps = 93/823 (11%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
++++R +F D+F ++ HT V SS +PY D ++ F N+GM Q+K++FLG
Sbjct: 10 TARNVRQAFFDFFT-SKDHTFVPSSSTIPYDDPTLLFANAGMNQYKSIFLGTVDPNSERG 68
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + E LTK
Sbjct: 69 KLRRAFNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITYSWEALTK 128
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
LP +RLY TY+ G + G+P DE+ + WLE GV H+ NFWEMG+TGP
Sbjct: 129 V-YGLPKERLYVTYYAGDPKAGIPADEDAKRYWLEQGVDPSHVLPS--TGNFWEMGATGP 185
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIH+D G A V+ D +IEIWN VFI R ++ L +IDTG+
Sbjct: 186 CGPCSEIHFDRIGGRDVAHL-VDGDDPTVIEIWNNVFIQFNREEDGSLRSLPSKHIDTGM 244
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV+ILQ+K S YDTD+F PL + I++++GA+PY F + +DT+YR+++D+
Sbjct: 245 GFERLVSILQDKRSNYDTDVFTPLFDKIQELTGARPYAGKFGDEDADGVDTAYRVVADHV 304
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R + AL+D P+ + LR V+R G L + E +GD +
Sbjct: 305 RTLAFALSDGGVPNNVGRGYVLRRVLRRGSRFVRKKLNAPIGSFFSSLLPVVVETMGDAF 364
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ ++I+ IL EE E F+ + G L +Y
Sbjct: 365 PELTKKQDEIKEILDEEE------------------------ESFSRTLDRGEKLFEQYA 400
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
TK A++ + E+ G + LYDTYG ++ + +A L++ + FE+ KE SK
Sbjct: 401 TK--AKEQGLKELHGGDIWRLYDTYGFPVDLTRLMAEEHGLSINEKQFEEAQEASKEASK 458
Query: 485 A-----KAAS---NVPDIDLMDLKH-FPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
K A+ +V D+ +D P T+D +K+ N+ IV
Sbjct: 459 GSFKKDKGAAVKLDVHDLAALDANDAIPKTNDSFKFQL---------------GNINAIV 503
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
G I H + S S + A G++ D+T+ YA AGGQ +D G +
Sbjct: 504 KG----------IYHDKQFLSSTS-NIPEGATFGVLLDRTSFYAEAGGQENDTGNIVIDG 552
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
E+ + S G ++H G++ ++ G D R HT +H+L
Sbjct: 553 VAD----FEVTNVQSYSGYVLHTGHLKYG-QLNAGDDVISSYDELRRWPLRSNHTATHIL 607
Query: 656 NAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
N ALR VL QK V + DFS + + + + +E D I V+V +
Sbjct: 608 NYALREVLGDHIDQKGSLVAPTKLRFDFS-HKAQIGLKELQQIETISIDWIKKNVKVYTK 666
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISR------------EPCCGTHVF 762
+ E + + + GE YPD V ++ + + I+R E C GTHV
Sbjct: 667 DLTLEEAYKIPGVRAVFGEAYPDPVRVVVLGYDVDEIARNVENPQWRKTSIEFCGGTHVA 726
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST 805
TG I+ +I G+R I +TG ++ A L T
Sbjct: 727 KTGDIKEFVIIEESGIAKGIRRIIAVTGQEAQEASRIASSLKT 769
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 75/117 (64%), Gaps = 10/117 (8%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM Q+K++FLG R NSQKCIR GGKHNDL G+D
Sbjct: 36 IPYDDPTLLFANAGMNQYKSIFLGTVDPNSERGKLRRAFNSQKCIRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF----PMVMIP 925
SYHHTFFEMLGNWSF DY+K++A + E LTK LP +RLY T+ P IP
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAITYSWEALTK-VYGLPKERLYVTYYAGDPKAGIP 151
>gi|367004358|ref|XP_003686912.1| hypothetical protein TPHA_0H02750 [Tetrapisispora phaffii CBS 4417]
gi|357525214|emb|CCE64478.1| hypothetical protein TPHA_0H02750 [Tetrapisispora phaffii CBS 4417]
Length = 956
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 266/809 (32%), Positives = 391/809 (48%), Gaps = 92/809 (11%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP---- 66
+ +K++R +F DYF ++GHT V SS +VP+ D ++ F N+GM Q+K +FLG
Sbjct: 8 KWMAKNVRQTFFDYF-KSKGHTYVPSSSVVPFDDPTLLFTNAGMNQYKPIFLGTVDPSSD 66
Query: 67 -APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
A R NSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A A E L
Sbjct: 67 FATLKRAYNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIAYAWELL 126
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
T LP DRLY TYF G Q GL D E +D+WL +GV DHI NFWEMG
Sbjct: 127 T-VVYGLPADRLYVTYFEGDAQQGLEPDLEAKDLWLAVGVSEDHIIPGNSHDNFWEMGEQ 185
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG SE+HYD G ++A VN D D++EIWN+VF+ + R ++ L +IDT
Sbjct: 186 GPCGPCSEMHYDRIGGRNAA-HLVNMDDPDVLEIWNLVFMQYNREQDRSLKSLPAKHIDT 244
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV+ILQ+ S YDTD+F PL I++++G +PY F + +DT+YR+L+D
Sbjct: 245 GMGFERLVSILQDVRSNYDTDVFQPLFVKIQEITGVRPYSGKFGAEDVDGIDTAYRVLAD 304
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R +T A+ D P+ + LR ++R + G L+ + E + +
Sbjct: 305 HVRTLTFAITDGGIPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLIEQVKE 364
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
++P++ + IL EE F K L + + E++
Sbjct: 365 IFPQVTKDPAFLFEILDEEEASF----------AKTLDRGEKLFEKY------------- 401
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+ A + G + L+DTYG ++ + +A + L + E FE+ E E
Sbjct: 402 ---AEAAAKSQTKILDGLQVWRLFDTYGFPVDLTELMAEEQGLKIDEEGFEKAKQESYEA 458
Query: 483 SKAKAAS--------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
SK NV ++ ++ P TDD KY T+++ D
Sbjct: 459 SKRGGKKDNFDMLKLNVHELSQLNELKVPKTDDSAKY---ISTDAESVILSLYDGETF-- 513
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+DSI E G+I DKT+ YA GGQ D G +
Sbjct: 514 ----------------------VDSIS-EAGKKYGVILDKTSFYAEQGGQEYDTGKIIID 550
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+ ++ + G + H G ++ + G + D RL HT +H+
Sbjct: 551 GEAE----FQVDNVQLYNGYVFHTGTLIEG-TLNKGDKTISSHDEERRLPIKNNHTGTHI 605
Query: 655 LNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN ALR+ L QK V ++ DFS + + LS+D + VE+ ND I + V
Sbjct: 606 LNLALRQTLGNDVDQKGSLVAPEKLRFDFS-HKKALSLDELRKVEEIANDQIKKNLPVYY 664
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDV-----------ILIDISDKE-NVISREPCCGTHV 761
+ + ++ + + GE YPD V +L D +++E N S E C GTHV
Sbjct: 665 KDVPLELAKGISSVRAVFGETYPDPVRVVSVGKTVEDLLADPTNEEWNKYSVEFCGGTHV 724
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
TG I+ ++ G+R I ++G
Sbjct: 725 PKTGDIKFFVILEESGIAKGIRRIVAVSG 753
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG A R NSQKCIR GGKHNDL GRD
Sbjct: 36 VPFDDPTLLFTNAGMNQYKPIFLGTVDPSSDFATLKRAYNSQKCIRAGGKHNDLEDVGRD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A A E LT LP DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAIAYAWELLT-VVYGLPADRLYVTY 141
>gi|336262950|ref|XP_003346257.1| hypothetical protein SMAC_05794 [Sordaria macrospora k-hell]
gi|380093586|emb|CCC08550.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 961
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 269/843 (31%), Positives = 413/843 (48%), Gaps = 82/843 (9%)
Query: 16 SIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYP 70
+R +FLD+F +GH +V SS +VP+ D ++ F N+GM QFK +FLG A
Sbjct: 11 QVRKTFLDFFAE-RGHNVVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTIGKTEDMAQLK 69
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R ++QKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + E LTK
Sbjct: 70 RAVDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIAWSWELLTKV-Y 128
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
L RLY TYF GS GL D E +++WLE+GVP DHI MK NFWEMG GPCG
Sbjct: 129 GLDPQRLYVTYFEGSPDLGLEPDLEAKNLWLEVGVPEDHIIPGNMKDNFWEMGDQGPCGP 188
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIHYD G +A VN D ++E+WNIVFI R + ++ L +IDTG+GFE
Sbjct: 189 CSEIHYDKVGGGRNAAHLVNMDDPLVVEVWNIVFIQFDRQADKSLKSLPAKHIDTGMGFE 248
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV+ LQ+KTS Y TD+F PL I++V+GA+ Y + + +DT+YR+++D+ R++
Sbjct: 249 RLVSALQDKTSNYATDIFTPLFAKIQEVTGAREYTDKYGKDDVDGIDTAYRVIADHIRLL 308
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+ A+AD P+ + +R V+R + F + G + + E +G+ +PE+
Sbjct: 309 SFAIADGAAPNNVGRGYVVRRVLRRGARYARKYFNAEIGTFFSRILPALVEQMGEQFPEL 368
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
I+ IL EE F AV L + + + E++ L +K K+
Sbjct: 369 VKKQTDIKEILDEEEVAF------AV----TLDRGEKQFEKY-------AALAIKSGKKK 411
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
L SG + LYDT+G +++ + +A + LT+ E ++NE +E KA+
Sbjct: 412 L---------SGADVWRLYDTFGFPEDLTKLMAEERGLTID----EAEVNEARE--KARE 456
Query: 488 ASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN-LVGIVIGD-QVFCIDK 545
AS + + V + S P D L G G Q+ K
Sbjct: 457 ASKAVKESVQEFAKLNV------HQIAELETSLNIPRPTSDAKFLKGDAKGKVQLIFNGK 510
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
++ ++ L +GL+ D TN YA +GGQ+ D G + + ++
Sbjct: 511 EFLKSSKD--------LPPKTPLGLLLDNTNFYAESGGQVADTGRIIIDGVAE----FKV 558
Query: 606 GELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTC 665
++ G IVH G + ++T G E D R HT +H+LN +LR VL
Sbjct: 559 LDVQEFGGYIVHNG-FIEYGELTEGDEVTCEYDELRRQPIRNNHTGTHILNHSLREVLGD 617
Query: 666 TY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFL 724
QK V D DFS + + ++ + +E N I ++ + + +
Sbjct: 618 EINQKGSLVDQDRLRFDFS-HKAAIPLEDIKKIEDLSNHYIRQNLKAYSKEVDLDLAREI 676
Query: 725 THLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFNTGHIESCTV 772
+ + GE YP+ V ++ I + + + + P C GTHV NTG I+ +
Sbjct: 677 EGVRAVFGETYPNPVRVVSIGMEVDELLKNPKNPEWRKISVEFCGGTHVENTGLIKDLII 736
Query: 773 IGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIPYGDDSIAFVNSGM 832
+ G+R I TG+ + A + + S ++ ++ + YG A + +
Sbjct: 737 VEESGIAKGIRRIVAYTGEGAHQAQRDAQVFS-----DKLEHINALSYGPQKAAEIKAAA 791
Query: 833 CQF 835
+
Sbjct: 792 VEL 794
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG A R ++QKCIR GGKHNDL G+D
Sbjct: 34 VPHNDPTLLFTNAGMNQFKPIFLGTIGKTEDMAQLKRAVDTQKCIRAGGKHNDLDDVGKD 93
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK L RLY T+
Sbjct: 94 SYHHTFFEMLGNWSFGDYFKKEAIAWSWELLTK-VYGLDPQRLYVTY 139
>gi|449546469|gb|EMD37438.1| hypothetical protein CERSUDRAFT_83193 [Ceriporiopsis subvermispora
B]
Length = 956
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 270/818 (33%), Positives = 397/818 (48%), Gaps = 81/818 (9%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
S+ +R F YF + + HT V SS +PY D ++ F N+GM Q+K++FLG A
Sbjct: 10 SSRQVREEFFKYFQSKE-HTFVPSSSTIPYEDPTLLFANAGMNQYKSIFLGTVDPQSDLA 68
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + E LT
Sbjct: 69 RLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAIAYSWELLT- 127
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
LP ++LY TYF G GL D E + WL+ GVP DH+ K NFWEMG+TGP
Sbjct: 128 VVYKLPKEQLYVTYFEGDPANGLEPDLEAKQYWLDQGVPEDHVLPGNAKDNFWEMGATGP 187
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SE+H+D G ++A VN D D++EIWN VFI R ++ L ++DTG+
Sbjct: 188 CGPCSEVHFDRIGGRNAAHL-VNHDDPDVLEIWNNVFIQFNREDDGSLRLLPSKHVDTGM 246
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV+++Q K S YDTD+F P+ I++++G +PY F + +DT+YR+++D+
Sbjct: 247 GFERLVSVVQGKRSNYDTDVFSPIFSKIQELTGVRPYQGKFGDEDENGIDTAYRVVADHV 306
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T AL+D P+ + LR ++R + V G L + E +GDV+
Sbjct: 307 RTLTFALSDGGVPNNVGRGYVLRRILRRGCRYARKKLGVNIGSFFSSLLPVVVEQMGDVF 366
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI + +I+ IL EE E F+ + G L +Y
Sbjct: 367 PEITKKMAEIKEILDEEE------------------------ESFSRTLDRGEKLFEQYA 402
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ L + ++SG + LYDTYG ++ + +A L + E FE KE SK
Sbjct: 403 NRTLQQGSK--QLSGKDVWRLYDTYGFPVDLTRLMAEELGLVVDEEEFEAAQAHSKEASK 460
Query: 485 A---KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
A K A +V +D+ D+ + K D +S ++ ++ +V
Sbjct: 461 ASLKKGAKDVVALDVHDIAALEKNTNVPKTD-----DSAKFALGNINAKVV--------- 506
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
AI H ++ S + +A GL+ D+T+ YA +GGQ D G + +
Sbjct: 507 -----AIYHNKTFPDATS-SIPEDAVFGLLLDRTSFYAESGGQEYDTGSIVIDGVAE--- 557
Query: 602 KVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
E+ + G ++H G++ S V + S D R HT +H+LN LR
Sbjct: 558 -FEVTNVQVSNGYVLHIGSMKYGSLSVGDEVVS--SYDELRRWPLRNNHTATHILNYCLR 614
Query: 661 RVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
L QK V + DFS + +S +A +E + I V+V + +
Sbjct: 615 ETLGDHIDQKGSLVAPTKLRFDFS-HKAGISAPDLAKIEGMSREWIRKNVKVYSKELALK 673
Query: 720 ELPFLTHLTVIPGEIYPDDVILI----DISD--------KENVISREPCCGTHVFNTGHI 767
+ L + GE YPD V ++ DI+D K S E C GTHV TG I
Sbjct: 674 TAQEVPGLRAVFGESYPDPVRVVALEFDINDILKDLHNPKWRSTSIELCGGTHVAKTGDI 733
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST 805
+ V+ G+R I +TG + A L+
Sbjct: 734 KDFVVVEESGIAKGIRRIVAVTGHEAAEAQRRADALTA 771
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 36 IPYEDPTLLFANAGMNQYKSIFLGTVDPQSDLARLKRAYNSQKCIRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LT LP ++LY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAIAYSWELLT-VVYKLPKEQLYVTY 141
>gi|255713044|ref|XP_002552804.1| KLTH0D01848p [Lachancea thermotolerans]
gi|238934184|emb|CAR22366.1| KLTH0D01848p [Lachancea thermotolerans CBS 6340]
Length = 955
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 276/826 (33%), Positives = 409/826 (49%), Gaps = 110/826 (13%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++RS+F+++F + HT V SSP++PY D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDRQKWTASNVRSTFMEFFKQRE-HTFVASSPVIPYDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
P+ R NSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K+DA +
Sbjct: 62 DPSSDYYSLKRAMNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKDAIQY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ E LTK +P +RLY TYF G + GL D E ++W +GV DHI K NFW
Sbjct: 122 SWELLTKV-YGIPSERLYVTYFEGDQKQGLEPDLEAFELWKSVGVSEDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D +++E+WNIVFI + R T+ L
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNMDDPNVLEVWNIVFIQYNREQNGTLKSLPS 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F PL I++++GA+PY F + +DT+Y
Sbjct: 240 KHIDTGMGFERLVSVLQDVKSNYDTDVFQPLFARIQEITGARPYEGKFGAEDADGIDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R +T ALAD P+ + LR ++R + G L+ +
Sbjct: 300 RVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSSLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ ++PEI + + IL EE F K L + + E++
Sbjct: 360 DQSKAMFPEINRDPSYLFEILDEEEASF----------AKTLDRGEKLFEKY-------- 401
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
Q A + G + LYDTYG ++ + +A K L + FE+
Sbjct: 402 --------AQAAAQTKDKTLDGLQVWRLYDTYGFPVDLTELMAEEKGLKIDGPGFEKAKQ 453
Query: 478 ELKERSKA---KAASNVPDIDLMDL-----KHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
E E SK K+AS++ +++ +L ++ P TDD KY+
Sbjct: 454 ESYEASKKGGKKSASDLIKLEVHELSTLNSENVPKTDDSPKYE---------------SA 498
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQ----- 584
N+ IV+ ++F + +D I E G+I D T YA GGQ
Sbjct: 499 NIEAIVL--RIFDGENF----------VDEIS-EVGKQYGVILDSTCFYAEQGGQEYDMG 545
Query: 585 ---IDDIGVAYLTNTTQENGKV-EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
IDD+ + N NG V G+L EGK+ V++SF D
Sbjct: 546 TLVIDDVAEFSVENVQLYNGYVFHTGQLG--EGKLSVGDKVIASF------------DEL 591
Query: 641 MRLGCMRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R HT +H+LN AL+ VL QK V ++ DFS + + +++D + VE+
Sbjct: 592 RRFPIKNNHTGTHILNFALKEVLGNDVDQKGSLVAPEKLRFDFS-HKKAVALDELKEVER 650
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISDKE 748
N+ I + V +++ ++ + + GE YPD D +L+D + +E
Sbjct: 651 ICNEQIKANLPVYYKNVPLDLARKISSVRAVFGETYPDPVRVVSVGKPVDDMLVDPTSEE 710
Query: 749 -NVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
S E C GTHV TG I+ +I G R I ++G +
Sbjct: 711 WQKYSVEFCGGTHVSKTGDIKEFVIIEESGIAKGTRRIVAVSGSEA 756
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM Q+K +FLG + P+ R NSQKCIR GGKHNDL GRD
Sbjct: 36 IPYDDPTLLFANAGMNQYKPIFLGTVDPSSDYYSLKRAMNSQKCIRAGGKHNDLEDVGRD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K+DA + + E LTK +P +RLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKDAIQYSWELLTK-VYGIPSERLYVTY 141
>gi|388856737|emb|CCF49697.1| probable ALA1-alanyl-tRNA synthetase, cytosolic [Ustilago hordei]
Length = 985
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 273/826 (33%), Positives = 397/826 (48%), Gaps = 96/826 (11%)
Query: 1 MNNPNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNV 60
N S + + +R +F YF + HT V SS +PY D S+ F N+GM Q+K +
Sbjct: 6 QNAATTSRFGDWPATKVRDTFTGYF-QKRAHTFVPSSSTIPYDDPSLLFANAGMNQYKPI 64
Query: 61 FLGLTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKR 115
FL + R NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K+
Sbjct: 65 FLSIADPNSSFGSMKRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKK 124
Query: 116 DACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGM 175
+A MA E LT LP DRLY TYF G + GL D E RD+WL++GV DHI
Sbjct: 125 EAIEMAWELLT-VVYRLPKDRLYVTYFEGDAKQGLEPDLEARDLWLKVGVAEDHILTGDA 183
Query: 176 KCNFWEMGSTGPCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADT 234
K NFWEMG+TGPCG SEIHYD + G +S L VN D ++IEIWN VF+ R +
Sbjct: 184 KDNFWEMGATGPCGPCSEIHYDRIGGRNASDL--VNKDDPNVIEIWNNVFMQFNREDDGS 241
Query: 235 IVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRT 294
+ PL +IDTG+GFERLV+ILQ+K S YDTD+F P+ I++++ A+ Y ++
Sbjct: 242 LRPLPAKHIDTGMGFERLVSILQDKPSNYDTDVFTPIFNKIQQLTSARAYTGKLGAEDKD 301
Query: 295 DLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKE 351
+DT+YR+++D+ R +T A++D PD + LR ++R F+V G +
Sbjct: 302 GIDTAYRVVADHVRTLTFAISDGGVPDRDGRGYVLRRILRRGTRYVRKYFQVPIGSFFSQ 361
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
L + + +G +PEI ++ ++ IL EE F + L + + E++
Sbjct: 362 LVPTLVDQMGHFFPEITKKVDDVKAILDEEEASFA----------RTLDRGEKLFEEYAA 411
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
A+ ++SG + LYDT+G ++ +A + L + +
Sbjct: 412 K----------------AKADGKKQLSGSDVWKLYDTFGFPVDLTLIMAEEQGLGVNEKE 455
Query: 472 FEQKLNELKERSKA---KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRY 522
FE E KE SKA K + D+ DL H P T D D+ Y NS +
Sbjct: 456 FEAAQAESKEISKAGGKKGETEAVKFDVHDLGHLEKDSSVPKTQD----DFKYGVNSVKA 511
Query: 523 TFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAG 582
+ V + D F + I + G++ D+T LYA +G
Sbjct: 512 S--------VKAIYQDHAFFPETTKIG-------------DRAKNFGILLDRTCLYAESG 550
Query: 583 GQIDDIGVAYLTNTTQENGKVE--IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
GQ D G + +GK E + + G ++H G++ +++ V D
Sbjct: 551 GQQADTGSIVI------DGKTEFVVEDAQVFSGYVLHIGHLKRG-ELSLNDEVVVSYDQS 603
Query: 641 MRLGCMRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R HT +H+LN LR VL QK V + DFS + + ++V + +E
Sbjct: 604 RRGPLQSNHTATHILNFGLREVLGDHIDQKGSLVAPTKLRFDFS-HKQGVNVQELKKIED 662
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKENVI 751
+ I V V + M + L + GE YP+ V ++ + SD EN
Sbjct: 663 ISIEWIKRDVGVYSKEMPLDTAQQIPGLRAVFGEAYPNPVRVVTLAYDLDTIASDIENPK 722
Query: 752 SR----EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
R E C GTHV TG I + G+R I +TGD +
Sbjct: 723 WRGTSVEFCGGTHVAKTGEIREFVITEESGIAKGIRRIIAVTGDEA 768
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D S+ F N+GM Q+K +FL + R NSQKCIR GGKHNDL G+D
Sbjct: 44 IPYDDPSLLFANAGMNQYKPIFLSIADPNSSFGSMKRAVNSQKCIRAGGKHNDLDDVGKD 103
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A MA E LT LP DRLY T+
Sbjct: 104 TYHHTFFEMLGNWSFGDYFKKEAIEMAWELLT-VVYRLPKDRLYVTY 149
>gi|67594831|ref|XP_665905.1| cytosolic tRNA-Ala synthetase [Cryptosporidium hominis TU502]
gi|54656773|gb|EAL35675.1| cytosolic tRNA-Ala synthetase [Cryptosporidium hominis]
Length = 989
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 289/834 (34%), Positives = 428/834 (51%), Gaps = 103/834 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R F+ YF HT +SSP++P D +I F+N+GM QFK++FLG + R
Sbjct: 14 VRRQFVKYFEGLD-HTFYRSSPVIPLNDPTILFINAGMNQFKSIFLGTVEPNSELSKLVR 72
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VANSQKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K +A A + LT+
Sbjct: 73 VANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKEEAIEWAFKLLTQ-VYG 131
Query: 132 LPLDRLYFTYFGGSDQY-GLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+P DRLY TYFGG + P DEE + IWL+ +P D I G K NFWEM TGPCG
Sbjct: 132 IPKDRLYATYFGGDPKLPSCPPDEEAKKIWLKY-LPEDRILSCGSKENFWEMADTGPCGP 190
Query: 191 SSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
SEIHYD + G +S+L VN D D+IEIWN+VF+ + R T+ PL K +DTG+G
Sbjct: 191 CSEIHYDRIGGRDASSL--VNKDDPDVIEIWNLVFMQYYREVDSTLTPLPKKCVDTGMGL 248
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKV---SGA---KPYGRTFTTSNRTDLDTSYRML 303
ERLV+ILQNKTS YD DLF P+ + I +V SG + G+ + +D SYR++
Sbjct: 249 ERLVSILQNKTSNYDIDLFKPIFDQIYQVISSSGVQIPRYSGKVGDIDDPEMIDMSYRVI 308
Query: 304 SDYSRMITVALADNMFPDATAKLRNVVRDALLISEDVFK---VKQGKLVKELSY----NI 356
SD+ R +T+A+AD P R V +L + +K G + Y ++
Sbjct: 309 SDHIRTLTIAIADGCIPSNEG--RGYVLRRILRRAIRYGSQYLKAGSNGEPWFYKLVDSV 366
Query: 357 AEILGDVYPEIQDSINKI-QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
+ I+G+ Y EI ++I I ++IL EE + L K E+FN
Sbjct: 367 SNIMGNYYKEIPENIQIIKEVILDEEKQFSKTLFKGT--------------ERFN----- 407
Query: 416 GLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQK 475
V+ ++ +D + AF LY TYG ++ + +A + + F+
Sbjct: 408 -KVINKLKSSQNNQQDQNKKLFPASEAFQLYSTYGFPMDLTELMANEQGFDFDRQGFQLC 466
Query: 476 LNELKERSKAKAASNV------PDIDLMDLKHFPV--TDDKYKYDYHYDTNSKRYTFPCL 527
+ S+ K + PDI + F + TDD+YK Y T K +
Sbjct: 467 MENHHLASEGKNNKSFDDLILKPDIQNNLIVEFGLKETDDQYK----YQTQIKDFY---- 518
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+NL+ I G+Q+ ID+ +++ +GLIFDKT Y+ +GGQ+ D
Sbjct: 519 -SNLIAIFDGNQL----------------IDATEIQGKV-IGLIFDKTTFYSESGGQVAD 560
Query: 588 IG-VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSS-FKVTPGLTSRVEVDARMRLGC 645
G + + N E K ++ + ++H G ++ +++P L S + VD R
Sbjct: 561 TGFIDFQYNNNDETSKFQVIDCKKFGNYVLHIGILLQGKIEISPELKSLMSVDYSRRNLI 620
Query: 646 MRAHTTSHLLNAALRRVL--TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIND 703
+ HT +H+LN ALR++L TC Q+ V + DFS + L++D + +EK ++
Sbjct: 621 KKNHTGTHILNFALRQILGSTCD-QRGSVVDPNRLRFDFSSQ-KPLTLDQIEEIEKMVSQ 678
Query: 704 VIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS--------------DKEN 749
+I + V + + S + ++ I GE YPD V ++ +S D+E
Sbjct: 679 IIQEKQTVYCQTVELSIAKQIPNIRAIFGETYPDPVRVLSVSKSVDSLINSQTDNNDQEK 738
Query: 750 VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
V S E C GTHV NT I S ++I + G+R I +T + S+ A+EN K L
Sbjct: 739 V-SIEFCGGTHVENTSEIISFSIISEEGIAKGIRRIVAVTDNQSEIAIENAKRL 791
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D +I F+N+GM QFK++FLG + RVANSQKCIR GGKHNDL G+D
Sbjct: 36 IPLNDPTILFINAGMNQFKSIFLGTVEPNSELSKLVRVANSQKCIRAGGKHNDLDDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K +A A + LT+ +P DRLY T+
Sbjct: 96 VYHHTFFEMLGSWSFGDYFKEEAIEWAFKLLTQ-VYGIPKDRLYATY 141
>gi|313229137|emb|CBY23722.1| unnamed protein product [Oikopleura dioica]
Length = 941
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 262/823 (31%), Positives = 406/823 (49%), Gaps = 95/823 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
+ + +R FLD+F + H V SS +P+ D ++ F N+GM QFK++F+G P
Sbjct: 5 ITANEVRQQFLDFFKELE-HPYVHSSSTIPHDDPTLLFANAGMNQFKSIFVGTIDPSSPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
NSQKC+R GGKHNDL G+DSYHHTFFEMLG+WSF DY+K++A + + E L
Sbjct: 64 AKLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGSWSFGDYFKKEAIQWSFELLN 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K +P DRLY TYF G+ + GL D E R+ WL+ +P D I K NFWEMG TG
Sbjct: 124 KV-WGIPADRLYATYFEGNPEEGLEPDNEAREEWLKY-LPADQILPGNAKDNFWEMGDTG 181
Query: 187 PCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
PCG SE+HYD + G +S+L VN D D++EIWN+VF+ + R + +++ L +DT
Sbjct: 182 PCGPCSELHYDRIGGRNASSL--VNMDDPDVLEIWNLVFMQYDRQADKSLISLPAKSVDT 239
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+V++LQ+K + YDTD+F P + IE ++G + Y F ++ +D +YR+L+D
Sbjct: 240 GMGLERVVSVLQDKRANYDTDMFSPYFKKIEDLTGTRAYTGLFGAEDKDGVDMAYRVLAD 299
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
++R +++ALAD PD + LR ++R A+ + +K V L + E LGD
Sbjct: 300 HARTLSIALADGGRPDNVGRGYVLRRILRRAIRYGHEKLNMKVDDFVA-LVDVVVESLGD 358
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE++ + IL E EW +KT L G K
Sbjct: 359 AFPELKKDPESTKEILKE--------------EWIQFMKT--------------LDRGQK 390
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L +++ + + GD+A+ LYDTYG ++ +A LTL E FE++ + ER
Sbjct: 391 ILERKIKQLNLTDRLPGDVAWLLYDTYGFPLDLTTLIAEEHNLTLSCEEFEEERQKAIER 450
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
SK TDD +K +Y ++ + YTF + +V + +
Sbjct: 451 SKGADG-------------VATTDDSHKQNYEANS-AGEYTFNSIKAKVVALRFNKEFH- 495
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
Q + VG++ DKTN YA GGQI D+G Y + ++ +
Sbjct: 496 ------------------QECESCEVGIVLDKTNFYAEQGGQIYDLG--YFSRENDDDFE 535
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
+ + G ++H G +V K++ G + +D R+ M HT +H+LN LR V
Sbjct: 536 FNVKNVQVRAGYVLHVGTLVG--KLSVGDEINLNIDTERRVNIMPNHTGTHVLNFGLRCV 593
Query: 663 L--TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
L QK V + DF+ G L + VE+ N+VI V + ++
Sbjct: 594 LGEGEADQKGSLVAPERLRFDFTA-GGALKPAQIKQVEEICNEVITRGGAVHCQVSPLAQ 652
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFNTGHIE 768
+ L + E YPD V ++ I N + P C GTH+ + H
Sbjct: 653 SKAIQGLRAMFDETYPDPVRVVSIGVPVNELLENPTSGAADKTSVEFCGGTHLRDISHAR 712
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQ 811
+ ++ + G+R + +TG ++ A + L+ A +
Sbjct: 713 KLIITAEEAISKGIRRVIAVTGAEAEKADRQAQRLAKANQLKE 755
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK++F+G P NSQKCIR GGKHNDL G+D
Sbjct: 32 IPHDDPTLLFANAGMNQFKSIFVGTIDPSSPMAKLKSAVNSQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLG+WSF DY+K++A + + E L K +P DRLY T+
Sbjct: 92 SYHHTFFEMLGSWSFGDYFKKEAIQWSFELLNK-VWGIPADRLYATY 137
>gi|367007058|ref|XP_003688259.1| hypothetical protein TPHA_0N00450 [Tetrapisispora phaffii CBS 4417]
gi|357526567|emb|CCE65825.1| hypothetical protein TPHA_0N00450 [Tetrapisispora phaffii CBS 4417]
Length = 957
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 268/815 (32%), Positives = 406/815 (49%), Gaps = 92/815 (11%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP 70
+ + ++R +F +YF + H V SS ++P+ D S+ F N+GM Q+K +FLG P+
Sbjct: 10 KWSAANVRETFFNYF-KSLDHRYVASSSVIPFDDRSLLFTNAGMNQYKPIFLG-NVDPHS 67
Query: 71 R------VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEF 124
+ NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A +
Sbjct: 68 KFYSLKSAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAIAYSWTL 127
Query: 125 LTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGS 184
LTK + +P+DRLY TYF G + L D ETRD+WL +GV HI K NFWEMG
Sbjct: 128 LTKVYM-IPVDRLYVTYFEGDPKLNLEPDLETRDLWLSVGVLESHIIPGATKDNFWEMGE 186
Query: 185 TGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
GPCG SEIHYD G ++A VN D D++E+WN+VF+ R S ++ L +ID
Sbjct: 187 QGPCGPCSEIHYDRIGGRNAA-HLVNKDDPDVLEVWNLVFMQFNRESNGKLMALPSKHID 245
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
TG+GFERLV+ILQN S YDTD+F P+ E I +++ + Y F ++ +DT+YR+++
Sbjct: 246 TGMGFERLVSILQNVRSNYDTDIFKPIFEKIREITKVREYNGKFGPNDENGIDTAYRVIA 305
Query: 305 DYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D++R + VALAD P+ A LR + R + +L+ I E
Sbjct: 306 DHARTLVVALADGGIPNNEGAGYVLRRIQRRGIRYVHKYMNYPIETFFSQLAPTIIEQFK 365
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
DV+PE+ + I IL EE + F KT E+ L
Sbjct: 366 DVFPEVAKNPEHIYAILNEEEKAF--------------AKTLDRGEK----------LFT 401
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE----QKLN 477
+Y K A++ S ++G + LYDT+G ++ Q +A+ +L + FE Q
Sbjct: 402 QYALK--AQESSDRMLNGTDVWRLYDTFGFPLDLTQLMASELQLNIDRTGFEKAKLQSYE 459
Query: 478 ELKERSKAKAAS----NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
K R K A N+ DI ++ ++ TDD +KY +++ G
Sbjct: 460 ASKRRKDNKEADQMKLNIHDISKLNDENILKTDDSFKYG---------------SSDISG 504
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
++ R + +D I+ + G+I DKT YA GGQI D G L
Sbjct: 505 NIL------------RLFNGTSFVDKIEKADTVY-GVILDKTCFYAEQGGQIYDTGSITL 551
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
N +N + + G ++H G +++ + G + + R HT +H
Sbjct: 552 DN---KNTSFTVQNVQVYNGYVLHSG-ILNEGSLEVGDKVTLSYNELRRNAIKANHTATH 607
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
+LN ALR VL Q+ V +++ DFS + LS+D++ +E+ N +I + V
Sbjct: 608 VLNYALRSVLGNEVEQRGSLVSAEKLRFDFS-NRKALSLDNIMKIEEICNGIIQREDDVY 666
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKENVISREP---CCGTHV 761
+++ + + + +PGE YPD V ++ + SD + + P C GTHV
Sbjct: 667 FKNISLEKAKQINSIRTVPGEDYPDPVRVVSVGQAIETLTSDSDGLTLPNPVELCGGTHV 726
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
NT I + S G+R I +TG+++ A
Sbjct: 727 SNTLFIGKLILTEETSIAKGIRRISAVTGEAAVTA 761
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 74/108 (68%), Gaps = 8/108 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR------VANSQKCIRVGGKHNDLSFAGR 871
IP+ D S+ F N+GM Q+K +FLG P+ + NSQKCIR GGKHNDL G+
Sbjct: 38 IPFDDRSLLFTNAGMNQYKPIFLG-NVDPHSKFYSLKSAYNSQKCIRAGGKHNDLEDVGK 96
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
DSYHHTFFEMLGNWSF DY+K++A + LTK + +P+DRLY T+
Sbjct: 97 DSYHHTFFEMLGNWSFGDYFKKEAIAYSWTLLTKVYM-IPVDRLYVTY 143
>gi|409080524|gb|EKM80884.1| hypothetical protein AGABI1DRAFT_112599, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 954
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 271/808 (33%), Positives = 397/808 (49%), Gaps = 93/808 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
IR +F DYF + H+ V SSP +PY D ++ F N+GM Q+K++FLG A R
Sbjct: 15 IRDAFFDYF-RARNHSFVPSSPTIPYEDPTLLFANAGMNQYKSIFLGTVDPNSDHAKLRR 73
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + E LT+
Sbjct: 74 AFNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAVGYSWEVLTEV-YK 132
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY TYF G + GL D E + WL+ GV DHI K NFWEMG+TGPCG
Sbjct: 133 LPKDRLYVTYFEGDPKTGLEPDLEAKQYWLDQGVDEDHILPGNAKDNFWEMGATGPCGPC 192
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIH+D G ++A VN D D++EIWN V+I R ++ PL ++DTGLGFER
Sbjct: 193 SEIHFDRIGGRNAAHL-VNKDDPDVLEIWNNVYIQFNREEDGSLRPLPSKHVDTGLGFER 251
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV+I+Q+K S YDTD+FLPL I++++G +PY F + +DT+YR+++D+ R +T
Sbjct: 252 LVSIIQDKHSNYDTDVFLPLFTRIQELTGVRPYQGKFGEEDTDGIDTAYRVVADHVRTLT 311
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
AL+D P+ + LR ++R + V G L + E +G V+PEI
Sbjct: 312 FALSDGGVPNNIGRGYVLRRILRRGSRFARKKLGVPIGSFFSSLVPTVIETMGAVFPEIT 371
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
++I+ IL EE E F+ + G L +Y K
Sbjct: 372 KKYDEIKEILDEEE------------------------ESFSRTLDRGEKLFDQYAKK-- 405
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA--- 485
A++ + + G + LYDTYG ++ +A L + + F++ KE SK
Sbjct: 406 AKEQGLQLLDGKDVWRLYDTYGFPVDLTLLMAEEMGLGINQKEFDEAQAWSKEASKGPTK 465
Query: 486 KAASNVPDIDLMDLK------HFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
K S++ +D+ D+ + P T+D K+ N+ +
Sbjct: 466 KGVSDMVKLDVHDIATLEKNPNVPKTNDSAKFG---------------TGNITATI---- 506
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
AI H ++ S + + GL+ DKT+ YA AGGQ D G +
Sbjct: 507 ------KAIFHNKAFVS-STENIPGYGTFGLLLDKTSFYAEAGGQEYDTGNIVIDGVAD- 558
Query: 600 NGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
E+ + +G ++H G + + +V + S D R HT +H+LN +
Sbjct: 559 ---FEVTNVQVYKGYVLHTGYLKYGTLEVGNEVIS--SYDELRRWPLRNNHTGTHILNFS 613
Query: 659 LRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
LR +L QK V + DFS + +S+ +A +++ D I V+V + +
Sbjct: 614 LREILGDHIDQKGSLVAPSKLRFDFS-HKSQISLSELAKIQEMCTDWIRRNVKVYGKDLD 672
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDIS--------DKENVISR----EPCCGTHVFNTG 765
+ L + GE YPD V ++ + D EN R E C GTHV TG
Sbjct: 673 LQTAYKIPGLRAVFGESYPDPVRVVSLEYDVDEIAKDIENPKWRQTSIEFCGGTHVARTG 732
Query: 766 HIESCTVIGYKSYNHGVRSIKCLTGDSS 793
I+ V+ G+R I +TG +
Sbjct: 733 DIKDIVVVEESGIAKGIRRIVAVTGQEA 760
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 37 IPYEDPTLLFANAGMNQYKSIFLGTVDPNSDHAKLRRAFNSQKCIRAGGKHNDLDDVGKD 96
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LT+ LP DRLY T+
Sbjct: 97 SYHHTFFEMLGNWSFGDYFKKEAVGYSWEVLTE-VYKLPKDRLYVTY 142
>gi|428174181|gb|EKX43078.1| hypothetical protein GUITHDRAFT_163919 [Guillardia theta CCMP2712]
Length = 976
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 270/856 (31%), Positives = 414/856 (48%), Gaps = 119/856 (13%)
Query: 17 IRSSFLDYFCNTQ-------GHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP--- 66
+R +F+++F + GHT S+ +VPY D ++ F N+GM QFK +F+G
Sbjct: 11 VRKTFIEFFQSKDEKGGADGGHTFWASNSVVPYDDPTLLFTNAGMNQFKPIFMGTVDPKS 70
Query: 67 --APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEF 124
AP R NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF Y+K++A A E
Sbjct: 71 PLAPLKRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFATYFKKEATAWAWEL 130
Query: 125 LTKPPVSLPLDRLYFTYFGGSDQYG--LPCDEETRDIWLELGVPRDHIKKEGMKCNFWEM 182
LT L DRLY TY G G +P DEETR +WL+ +P + + K MK NFWEM
Sbjct: 131 LTNV-YGLEPDRLYATYCEGDQHKGGTVPPDEETRQLWLQY-LPPERVLKGNMKDNFWEM 188
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
G TGPCG +E+HYD G ++A VN D +++EIWN+VFI R ++ L +
Sbjct: 189 GDTGPCGPCTELHYDRIGGRNAAHL-VNMDDPNVLEIWNVVFIQMFRNKDQSLSMLPGKH 247
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRM 302
+DTG+G ER+ +ILQ K S YDTD+F P+ + I K +G +PY + +D +YR+
Sbjct: 248 VDTGMGLERITSILQGKMSNYDTDIFTPIFDAIHKRTGVRPYTGKVGKDDSDGIDMAYRV 307
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVF----KVKQGKLVKELSYN 355
++D+ R +T+A+ D P + +R ++R + + + LS
Sbjct: 308 VADHIRTLTIAVTDGAQPGNDGRNYVIRRILRRGVRYARQYLYPPGTQYEAGFFSSLSSI 367
Query: 356 IAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
+ ++LG+ +PE++ + P V PE I+EE
Sbjct: 368 VVDVLGEAFPELKGN---------------------------PGVGMTPEKVASIILEEE 400
Query: 416 GLVL-----GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
L G+ K D S ISG+ AF LYDT+G ++ +A K +++ +
Sbjct: 401 VSFLRTLDRGIAQFEKFAEMDQSAGRISGEHAFMLYDTFGFPVDLTLLMAEEKGISVDSQ 460
Query: 471 AFEQKLNELKERSKAKAASN----VPDIDLMD--LKHFPV--TDDKYKYDYHYDTNSKRY 522
+E+ + + + +S+ +A V + + D K V TDD KYD+ +
Sbjct: 461 GYEECMEKQRAKSRGEAKEGEVVLVLEAEQTDKLAKELGVVATDDSTKYDW-----TSAG 515
Query: 523 TFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAG 582
+ P + + I G K + A+ G + GLIFDKTN YA AG
Sbjct: 516 SGPRGNATVKAIWDG-------KEFLSEAKEGT-----------YCGLIFDKTNFYAEAG 557
Query: 583 GQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMR 642
GQ+ D G T + + G I+H GN + S V G + ++VD R
Sbjct: 558 GQLFDTG-----RVTTSEAVFNVQNVQKFGGYILHSGN-LGSGSVKVGDAAELDVDYERR 611
Query: 643 LGCMRAHTTSHLLNAALRRVLTCTY-----QKSCRVFSDECALDFSVYGETLSVDSVAAV 697
HT++HLLN ALR+VL Q+ V D+ DFS YG+ + V+ V V
Sbjct: 612 SLIASNHTSTHLLNFALRKVLGADGAVNIDQRGSIVGPDKLRFDFS-YGKPMKVEEVEQV 670
Query: 698 EKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------- 744
+ ++I + ++ + S + L + GE+YPD V ++ +
Sbjct: 671 RTLVQELIRGGYPLQKKEVALSAAKQIKSLRAVFGEVYPDPVRVVSVGPVPHSIDDLLAK 730
Query: 745 --SDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKH 802
S + +S E C GTH+ NT +++G + GVR + C+T D+++ A + +
Sbjct: 731 PDSGEWEKLSVEFCGGTHMDNTKEAVDFSILGEEGTAKGVRRVVCVTRDAARQAKQAAED 790
Query: 803 LSTAASFSQILNVGNI 818
++ N G+I
Sbjct: 791 FDV-----RVANAGSI 801
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 69/107 (64%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+PY D ++ F N+GM QFK +F+G AP R NSQKCIR GGKHNDL G+D
Sbjct: 41 VPYDDPTLLFTNAGMNQFKPIFMGTVDPKSPLAPLKRACNSQKCIRAGGKHNDLDDVGKD 100
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF Y+K++A A E LT L DRLY T+
Sbjct: 101 VYHHTFFEMLGNWSFATYFKKEATAWAWELLTN-VYGLEPDRLYATY 146
>gi|298708166|emb|CBJ30506.1| Alanyl-tRNA Synthetase [Ectocarpus siliculosus]
Length = 992
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 272/836 (32%), Positives = 408/836 (48%), Gaps = 93/836 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----R 71
+R SF+ +F HT KSSP+VP+ D ++ F N+GM QFK +FLG P R
Sbjct: 36 VRDSFISFFTEKHDHTFWKSSPVVPHDDPTLLFANAGMNQFKPLFLGTADPALPLSKLTR 95
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF Y+K +A A E LT
Sbjct: 96 ATNSQKCIRAGGKHNDLDDVGKDLYHHTFFEMLGNWSFGSYFKEEAIGYAWECLTTV-YK 154
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L RLY TYFGG ++ + DE+ + IWL+ +P + + NFWEMG GPCG
Sbjct: 155 LDPSRLYATYFGGDEKLRVGADEDAKKIWLKY-LPESRVLPFSLADNFWEMGDVGPCGPC 213
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
EIHYD G +A VN D+ ++IEIWN+VFI + R + ++ L +IDTGLGFER
Sbjct: 214 VEIHYDRIGGRDAA-KDVNMDKPEVIEIWNVVFIQYNRENDGSLKELPNKHIDTGLGFER 272
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
L +ILQ K S YDTD+F+P+ E I +GA+PY + ++D +YR+++D+ R +T
Sbjct: 273 LASILQGKMSNYDTDVFVPIFEAIRSATGARPYTGKVGEEDSDNMDMAYRVVADHIRTLT 332
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
+A+ D P + LR V+R A+ + V K G L + ++ ++PE+
Sbjct: 333 IAITDGCTPSNDGRGYVLRRVLRRAIRYGQQVLGGKPG-FFHTLVPVVVGLMKGIFPELV 391
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
D+ ++ ++ +E F+ +KE+ + + + F
Sbjct: 392 DAEARVTAVIKDEEMSFNKTLDKGLKEFNKVAAALGDSKVF------------------- 432
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK-----ERS 483
G AF LY + G +++ +A K L++ E F+QK+++ K RS
Sbjct: 433 ---------PGTAAFQLYSSMGFPLDLLTLMAEEKGLSVDVEGFDQKMSDEKTKSNQARS 483
Query: 484 KAKAASNVP------DIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
KAA P +D + + T+ +Y +H +K VG G
Sbjct: 484 NQKAAGGKPMILEAEQMDWLSKRDTEATEASGRYTWHQQPAAKVLAL------FVGKGEG 537
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
+ D + S + ++ Q VG++ D T+ YA GGQI DIG L++ +
Sbjct: 538 E-----DGVGFVPSASAVADEADQQT----VGVVLDCTSFYAEGGGQIYDIGELSLSDGS 588
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
G + +++S +H G V + ++ G +VD R HT +H+LN
Sbjct: 589 ---GSFAVRQVSSFGAYTLHIGQVKAG-TLSVGSDVVCKVDYERRANVAPNHTMTHVLNF 644
Query: 658 ALRRVLTCT----YQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
ALR+VL + QK + ++ DFS G +L+ + VA VE +ND I + V
Sbjct: 645 ALRKVLDPSDGMCDQKGSFLDDEKLRFDFSWSG-SLTAEQVADVEDLVNDKINKNLPVYA 703
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDIS--------DKENV----ISREPCCGTHV 761
+ + L + GE YPD V ++ I D EN +S E C GTH+
Sbjct: 704 FVAPLEQAQRIQSLRGVFGERYPDPVRVLSIGQDVPAMLEDPENSAWSDVSVEFCGGTHL 763
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGN 817
NT E+ ++ GVR I +T + AAVE K +F Q L+V +
Sbjct: 764 SNTQEAETFVILEEAGIAKGVRRIVAVTRGLALAAVERAK------AFEQQLDVAD 813
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P R NSQKCIR GGKHNDL G+D
Sbjct: 59 VPHDDPTLLFANAGMNQFKPLFLGTADPALPLSKLTRATNSQKCIRAGGKHNDLDDVGKD 118
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF Y+K +A A E LT L RLY T+
Sbjct: 119 LYHHTFFEMLGNWSFGSYFKEEAIGYAWECLTT-VYKLDPSRLYATY 164
>gi|355748596|gb|EHH53079.1| hypothetical protein EGM_13642 [Macaca fascicularis]
Length = 985
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 268/793 (33%), Positives = 397/793 (50%), Gaps = 86/793 (10%)
Query: 39 IVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCVRVGGKHNDLSCAGR 93
+ P GD S+ FVN+GM QFK +FLG A + RVANSQKCVR GG+HNDL GR
Sbjct: 64 VRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGR 123
Query: 94 DSYHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPC 152
D HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P +RL+ +YF G + GL
Sbjct: 124 DLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPTERLWVSYFDGDPKAGLEP 182
Query: 153 DEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNAD 212
D ETRDIWL LGVP + G + NFWEMG+TGPCG +EIHYD+ G
Sbjct: 183 DLETRDIWLSLGVPATRVLSFGPQENFWEMGNTGPCGPCTEIHYDLAG---------GVG 233
Query: 213 RNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLL 272
L+E+WN+VF+ H R + ++ PL + ++DTG+G ERLV +LQ K STYDTDLF PLL
Sbjct: 234 APQLVELWNLVFMQHNREADGSLQPLPQWHVDTGMGLERLVAVLQGKHSTYDTDLFSPLL 293
Query: 273 ETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNV 329
I++ A PY ++ DT+YR+++D+ R ++V ++D +FP + LR +
Sbjct: 294 HAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCISDGVFPGMSGPPLVLRRI 353
Query: 330 VRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQ-LILGEESRIFDNL 388
+R A+ S ++ K G + L + E LGD YPE+Q + +I L+L +E+ +L
Sbjct: 354 LRRAVRFSMEILKAPPG-FLGSLVPVVVETLGDAYPELQRNSAQISNLVLEDEAAFLASL 412
Query: 389 RKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDT 448
+ + + +T L ++ P V L+ L + E+ + D+
Sbjct: 413 ERGR----RIIDRTLRTLGPSDMF--PAEVAWSLSLSGDLGLPLDMVELMLEEKGVQLDS 466
Query: 449 YGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDK 508
GL + L EA + + + + K +V + + + P TD
Sbjct: 467 TGLER-------------LAQEAAQHQARQAEPVQKQGLWLDVHALGELQRQGVPPTDSS 513
Query: 509 YKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWV 568
KY+Y N Y F + ++ Q++ D A+ AS+ Q
Sbjct: 514 PKYNYSLRPNGS-YEFGTCEAQVL------QLYTEDGTAV------ASVGKGQR-----C 555
Query: 569 GLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVT 628
GL+ D+TN YA GGQ D G YL QE+ + G I+H ++
Sbjct: 556 GLLLDRTNFYAEQGGQASDRG--YLVRVGQEDVLFPVARAQVCGGFILHEAVAPECLQI- 612
Query: 629 PGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGE 687
G ++ VD RL CM HT +HLLN ALR+ L T Q+ + ++ LD +
Sbjct: 613 -GDQVQLHVDKAWRLACMAKHTATHLLNWALRQTLGPGTEQQGSHLNPEQLRLDVTTQ-T 670
Query: 688 TLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPG-----EIYPDDV--- 739
L+ + + AVE + + VQ D + + E+P L +PG E+YPD V
Sbjct: 671 ALTPERLRAVENTVQEA----VQQD-KPVYMEEVP-LALTAQVPGLRCLDEVYPDPVRVV 724
Query: 740 --------ILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGD 791
L S S E CCGTH+ TG + +IG + + G + +TG+
Sbjct: 725 SVGVPVAHALDPASQAALQTSVELCCGTHLLRTGAVGDLVIIGDRQLSKGTTRLLAITGE 784
Query: 792 SSKAAVENGKHLS 804
++ A E G++L+
Sbjct: 785 QAQQARELGQNLA 797
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 74/107 (69%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RVANSQKC+R GG+HNDL GRD
Sbjct: 66 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDL 125
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P +RL+ ++
Sbjct: 126 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPTERLWVSY 171
>gi|426197443|gb|EKV47370.1| hypothetical protein AGABI2DRAFT_192563, partial [Agaricus bisporus
var. bisporus H97]
Length = 954
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 268/808 (33%), Positives = 397/808 (49%), Gaps = 93/808 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
IR +F DYF + H+ V SSP +PY D ++ F N+GM Q+K++FLG A R
Sbjct: 15 IRDAFFDYF-RARNHSFVPSSPTIPYEDPTLLFANAGMNQYKSIFLGTVDPNSDHAKLRR 73
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + E LT+
Sbjct: 74 AFNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAVGYSWEVLTEV-YK 132
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY TYF G + GL D E + WL+ GV DHI K NFWEMG+TGPCG
Sbjct: 133 LPKDRLYVTYFEGDPKTGLEPDLEAKQYWLDQGVDEDHILPGNAKDNFWEMGATGPCGPC 192
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIH+D G ++A VN D D++EIWN V+I R ++ PL ++DTGLGFER
Sbjct: 193 SEIHFDRIGGRNAAHL-VNKDDPDVLEIWNNVYIQFNREEDGSLRPLPSKHVDTGLGFER 251
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV+I+Q+K S YDTD+FLPL I++++G +PY F + +DT+YR+++D+ R +T
Sbjct: 252 LVSIIQDKHSNYDTDVFLPLFTRIQELTGVRPYQGKFGEEDTDGIDTAYRVVADHVRTLT 311
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
AL+D P+ + LR ++R + V G L + E +G V+PEI
Sbjct: 312 FALSDGGVPNNIGRGYVLRRILRRGSRFARKKLGVPIGSFFSSLVPTVIETMGTVFPEIT 371
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
++I+ IL EE F + L + + +Q+ +
Sbjct: 372 KKYDEIKEILDEEEESFS----------RTLDRGEKLFDQY----------------AKR 405
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA--- 485
A++ + + G + LYDTYG ++ +A L + + F++ KE SK
Sbjct: 406 AKEQGLQLLDGKDVWRLYDTYGFPVDLTLLMAEEMGLGINQKEFDEAQAWSKEASKGPTK 465
Query: 486 KAASNVPDIDLMDLK------HFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
K S++ +D+ D+ + P T+D K+ N+ +
Sbjct: 466 KGVSDMVKLDVHDIATLEKNPNVPKTNDSAKFG---------------TGNITATI---- 506
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
AI H ++ S + + GL+ DKT+ YA AGGQ D G +
Sbjct: 507 ------KAIFHNKAFVS-STENIPGYGTFGLLLDKTSFYAEAGGQEYDTGNIVIDGVAD- 558
Query: 600 NGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
E+ + +G ++H G + + +V + S D R HT +H+LN +
Sbjct: 559 ---FEVTNVQVYKGYVLHTGYLKYGALEVGNEVIS--SYDELRRWPLRNNHTGTHILNFS 613
Query: 659 LRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
LR +L QK V + DFS + +S+ +A +++ D I V+V + +
Sbjct: 614 LREILGDHIDQKGSLVAPSKLRFDFS-HKSQISLSELAKIQEMCTDWIRRNVKVYGKDLD 672
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDIS--------DKENVISR----EPCCGTHVFNTG 765
+ L + GE YPD V ++ + D EN R E C GTHV TG
Sbjct: 673 LQTAYKIPGLRAVFGESYPDPVRVVSLEYDVDEIAKDIENPKWRQTSIEFCGGTHVARTG 732
Query: 766 HIESCTVIGYKSYNHGVRSIKCLTGDSS 793
I+ V+ G+R I +TG +
Sbjct: 733 DIKDIVVVEESGIAKGIRRIVAVTGQEA 760
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 37 IPYEDPTLLFANAGMNQYKSIFLGTVDPNSDHAKLRRAFNSQKCIRAGGKHNDLDDVGKD 96
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LT+ LP DRLY T+
Sbjct: 97 SYHHTFFEMLGNWSFGDYFKKEAVGYSWEVLTE-VYKLPKDRLYVTY 142
>gi|366993787|ref|XP_003676658.1| hypothetical protein NCAS_0E02290 [Naumovozyma castellii CBS 4309]
gi|342302525|emb|CCC70299.1| hypothetical protein NCAS_0E02290 [Naumovozyma castellii CBS 4309]
Length = 956
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 266/830 (32%), Positives = 409/830 (49%), Gaps = 78/830 (9%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + ++++R++FLDYF ++ HT V SSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQKWTAQNVRNTFLDYF-KSKEHTFVPSSPVVPFDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
P+ R NSQKCVR GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 62 DPSSDFYTLKRAYNSQKCVRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAIHY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
A E LT +P DRLY TYF G + GL D E +D+W ++GVP DHI K NFW
Sbjct: 122 AWELLT-VVYGIPADRLYVTYFEGDAKQGLEPDSEAQDLWRKVGVPEDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLS 239
EMG GPCG SEIHYD + G +S+L VN D D++E+WN+VFI R S ++ L
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNASSL--VNMDDPDVLEVWNLVFIQFNRESDGSLKSLP 238
Query: 240 KNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTS 299
+IDTG+GFERLV++LQ+ S YDTD+F PL + I++++ A+ Y F ++ ++DT+
Sbjct: 239 AKHIDTGMGFERLVSVLQDVRSNYDTDVFQPLFKRIQEITNARDYTGKFGAEDKDNIDTA 298
Query: 300 YRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNI 356
YR+L+D+ R +T ALAD P+ + LR ++R + G +L+ +
Sbjct: 299 YRVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGDFFSKLAPTL 358
Query: 357 AEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
E + D++PE+ + IL EE F K L + + E++
Sbjct: 359 IEQVKDIFPEVAKDPAFLFEILDEEEASF----------AKTLDRGERLFEKYAAT---- 404
Query: 417 LVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKL 476
A + + G + LYDTYG ++ + +A + L + FE+
Sbjct: 405 ------------AAETQSKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAK 452
Query: 477 NELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
E E SK + D+ +++ +D + +S +Y F +++ ++ +
Sbjct: 453 QESYEASKRGGKKDQSDLIKLNVHELSELNDN---NVAKTDDSAKYGFENIESTILKLHD 509
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
G + +D I E G++ DKT YA GGQ D G + +
Sbjct: 510 GTKF----------------VDEI-TESGKKYGVLLDKTCFYAEQGGQEYDTGKLVIDDV 552
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+ N VE +L + G + H G++ K++ G D R HT +H+LN
Sbjct: 553 AEFN--VENVQLYN--GFVFHTGSLEEG-KLSVGDKIIASYDELRRFPIKNNHTGTHILN 607
Query: 657 AALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
AL L QK V ++ DFS + + L++D + VE+ N I V +
Sbjct: 608 FALLETLGNEVDQKGSLVAPEKLRFDFS-HKKALAMDELRKVEEICNQQIKENFPVYYKE 666
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFN 763
+ + ++ + GE YPD V ++ + + + P C GTHV
Sbjct: 667 VPLDLAKSIFNVRAVFGETYPDPVRVVCVGKPVEELLKNPTSEEWGNYSIEFCGGTHVVK 726
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQIL 813
TG I+ ++ G+R I +TG + A ST ++ L
Sbjct: 727 TGDIKYFVILEESGIAKGIRRIVAVTGSDAFEAQRIANEFSTELDAAEKL 776
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + P+ R NSQKC+R GGKHNDL G+D
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFLGTVDPSSDFYTLKRAYNSQKCVRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A A E LT +P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAIHYAWELLT-VVYGIPADRLYVTY 141
>gi|401623423|gb|EJS41521.1| ala1p [Saccharomyces arboricola H-6]
Length = 958
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 277/829 (33%), Positives = 400/829 (48%), Gaps = 122/829 (14%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++R++FLDYF + H VKSSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQKWTAANVRNTFLDYF-KCKEHKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
PA R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 62 DPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ LT+ +P +RLY TYF G ++ GL D E R++W+ +GVP DHI K NFW
Sbjct: 122 SWTLLTEV-YGIPKNRLYVTYFEGDEKLGLEPDTEARELWINVGVPEDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLS 239
EMG GPCG SEIHYD + G +S+L VN D D++E+WN+VFI R ++ L
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNASSL--VNMDDPDVLEVWNLVFIQFNREQDGSLKSLP 238
Query: 240 KNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTS 299
+IDTG+GFERLV++LQ+ S YDTD+F PL E I++++ A+PY F ++ +DT+
Sbjct: 239 AKHIDTGMGFERLVSVLQDVRSNYDTDVFTPLFERIQEITSARPYSGNFGEDDKDGIDTA 298
Query: 300 YRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNI 356
YR+L+D+ R +T ALAD P+ + LR ++R + G LS +
Sbjct: 299 YRVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLSPTL 358
Query: 357 AEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
+ D++PE+ + IL EE F KT E+
Sbjct: 359 IAQVQDIFPELAKDPAFLFEILDEEEASF--------------AKTLDRGER-------- 396
Query: 417 LVLGVKYLTKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
L ++ A S TE + G + LYDTYG ++ + +A + L + FE
Sbjct: 397 -------LFEKYAAAASKTESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFE 449
Query: 474 QKLNELKERSKAKAASNVPDI---------DLMDLKHFPVTDDKYKYDYHYDTNSKRYTF 524
+ E E SK + D+ DL D K P T+D++KY N +
Sbjct: 450 KAKQESYEASKRGGKKDQSDLIKLNVHELSDLNDAK-VPKTNDEFKYG---SANVESTIL 505
Query: 525 PCLD-TNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGG 583
D TN V + E G+I DKT YA GG
Sbjct: 506 KLHDGTNFVEEIT--------------------------EQGKKYGVILDKTCFYAEQGG 539
Query: 584 Q--------IDDIGVAYLTNTTQENGKV-EIGELASLEGKIVHFGNVVSSFKVTPGLTSR 634
Q IDD+ + N NG V G L EGK+ +++SF
Sbjct: 540 QEYDTGKIVIDDVAEFNVENVQLYNGFVFHTGSLE--EGKLSVGDKIIASF--------- 588
Query: 635 VEVDARMRLGCMRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDS 693
D R HT +H+LN AL+ L QK V ++ DFS + + ++ D
Sbjct: 589 ---DELRRFPIKNNHTGTHILNLALKETLGNDIDQKGSLVAPEKLRFDFS-HKKAVTGDE 644
Query: 694 VAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------- 744
+ +E N I + +QV + + + + + GE YPD V ++ +
Sbjct: 645 LKKIEDICNKQIKDNLQVFYKEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIDELLA 704
Query: 745 ---SDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
+++ N S E C GTHV TG I+ V+ G+R I +TG
Sbjct: 705 NPANEEWNNYSIEFCGGTHVNKTGDIKFFVVLEESGIAKGIRRIVAVTG 753
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + PA R NSQKCIR GGKHNDL G+D
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFLGTVDPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + LT+ +P +RLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAITYSWTLLTE-VYGIPKNRLYVTY 141
>gi|406607139|emb|CCH41400.1| alanyl-tRNA synthetase [Wickerhamomyces ciferrii]
Length = 938
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 269/798 (33%), Positives = 389/798 (48%), Gaps = 95/798 (11%)
Query: 23 DYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQK 77
+YF +GHT V SS +VPY D ++ F N+GM Q+K +FLG + P+ R NSQK
Sbjct: 5 NYF-KERGHTFVPSSSVVPYDDPTLLFANAGMNQYKPIFLGTVDPSSDFHNLKRAVNSQK 63
Query: 78 CVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRL 137
C+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A + + E LTK LP DRL
Sbjct: 64 CIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIQYSWELLTKV-YGLPADRL 122
Query: 138 YFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHYD 197
Y TYFGG + GL D E + +W ++GV DHI +K NFWEMG GPCG SE+HYD
Sbjct: 123 YVTYFGGDEASGLEPDLEAKQLWKDVGVADDHILPGSVKDNFWEMGDQGPCGPCSEVHYD 182
Query: 198 MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQ 257
G ++A VN D +++EIWN VF+ R + ++ PL +IDTGLGFERLV+ILQ
Sbjct: 183 RIGGRNAA-HLVNEDDPNVLEIWNNVFMQFNREADRSLKPLPSKHIDTGLGFERLVSILQ 241
Query: 258 NKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADN 317
N S YDTD+F PL + I++++GA+ Y F + +DT+YR+L+D+ R +T A+AD
Sbjct: 242 NVYSNYDTDVFQPLFKKIQEITGAREYTGKFGDEDVDGIDTAYRVLADHVRTLTFAIADG 301
Query: 318 MFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKI 374
P+ + LR ++R + F G +LS + + + D++PE+ + I
Sbjct: 302 GVPNNEGRGYVLRRILRRGARYARKYFNYPIGNFFSQLSPTLIDQVKDIFPELTKDPSTI 361
Query: 375 QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSI 434
IL EE F K L + + +Q+ A S
Sbjct: 362 FEILDEEEASFS----------KTLDRGEKLFQQY-----------------ATAASKSD 394
Query: 435 TEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDI 494
++G + LYDTYG ++ +A L + +E FE+ E E SKA S ++
Sbjct: 395 KTLNGKDVWRLYDTYGFPVDLTTLMAEEAGLKIDNEGFEKARIESYEASKAGGKSKGVEL 454
Query: 495 DLMDL--------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
+D+ P TDD S ++ F ++ ++ I G
Sbjct: 455 IKLDVHALGKLSEDALPKTDD-----------SSKFGFENIEAKILAIYDGKDFV----- 498
Query: 547 AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIG 606
I I ++ G+I DKT YA GGQ D G + +++ N +
Sbjct: 499 --------EEITDITKQY----GIILDKTPFYAEQGGQEYDTGKIVIDGSSEFN----VE 542
Query: 607 ELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTC 665
G + H G + K+ + + D R HT +H+LN ALR VL
Sbjct: 543 NTQQYAGYVFHTGRLAEGQLKINDKVIAGY--DELRRWPIRNNHTATHILNLALREVLGD 600
Query: 666 TY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFL 724
QK V ++ DFS + L++D VA VE+ N+ I V + + +
Sbjct: 601 EVNQKGSLVAQEKLRFDFS-NKQGLTLDQVAKVEQISNEEIKKSQVVYSKEVALDVAKGI 659
Query: 725 THLTVIPGEIYPDDVILIDISD------------KENVISREPCCGTHVFNTGHIESCTV 772
+ + GE YPD V ++ I K + S E C GTHV T I+ +
Sbjct: 660 YAVRAVFGETYPDPVRVVSIGQPVEDLLNDPQNPKWHGASIEFCGGTHVAKTSDIKDFVI 719
Query: 773 IGYKSYNHGVRSIKCLTG 790
+ G+R I +TG
Sbjct: 720 VEESGIAKGIRRIIAVTG 737
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+PY D ++ F N+GM Q+K +FLG + P+ R NSQKCIR GGKHNDL GRD
Sbjct: 21 VPYDDPTLLFANAGMNQYKPIFLGTVDPSSDFHNLKRAVNSQKCIRAGGKHNDLEDVGRD 80
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + + E LTK LP DRLY T+
Sbjct: 81 SYHHTFFEMLGNWSFGDYFKKEAIQYSWELLTK-VYGLPADRLYVTY 126
>gi|452825581|gb|EME32577.1| alanyl-tRNA synthetase [Galdieria sulphuraria]
Length = 961
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 269/833 (32%), Positives = 418/833 (50%), Gaps = 82/833 (9%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP--- 70
S +R SF+D+F + H SSP++P+ D ++ F+N+GM QFK VFLG P
Sbjct: 4 SVQVRRSFIDFFVQKE-HVFYPSSPVIPFEDPTLLFINAGMNQFKPVFLGTVDPTSPLSK 62
Query: 71 --RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K +A A+E LT+
Sbjct: 63 LKRACNSQKCIRAGGKHNDLEDVGKDTYHHTFFEMLGNWSFGDYFKEEAIAWAMELLTQV 122
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
LP +R+Y TYFGGS ++ L D E ++IWL+ +P D + G K NFWEMG GPC
Sbjct: 123 -FGLPKERMYATYFGGSKEWKLEPDWEAKNIWLKY-LPEDRVLPFGAKDNFWEMGDVGPC 180
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G SEIH+D G ++A VN D +IEIWN+VFI R + T+ L +IDTG+G
Sbjct: 181 GPCSEIHFDRLGNRNAA-ELVNKDDPSVIEIWNLVFIQFNRETDGTLKLLPNKHIDTGMG 239
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
FER+V+ILQ S YDTD+F L I++ +G + Y T + ++ +DT+YR+++D+ R
Sbjct: 240 FERVVSILQGVGSNYDTDVFSGLFLAIQEKTGCRRYTGTIGSQDKDMVDTAYRVVADHVR 299
Query: 309 MITVALADNMFP---DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
+T A+ D P D LR ++R A+ ++ K G L+ L + E + D +P
Sbjct: 300 TLTFAITDGAVPSNNDRGYVLRRILRRAVRYAQQFLGAKTG-LISSLVDVVVEQMKDAFP 358
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E+Q ++ ++ ++ EE F + L+K +E FN L
Sbjct: 359 ELQQRVDFVKQVILEEEESFG----------RTLLKG---IEAFN------------KLA 393
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
L + T + G F LYDT G ++ + +A + L + F++ L ++ S+A
Sbjct: 394 SHLENEGK-TIVPGQDVFFLYDTMGFPLDLTEVMARERGLKVDVRGFDEALENARKISRA 452
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTN--------SKRYTFPCLDTNLVGIVIG 537
SN + K + D+ +H N +K F L + +V + G
Sbjct: 453 DRFSNE-----VGSKSLQLGADEI---FHLQKNGIMPSVDEAKYRWFESLSSFIVALFDG 504
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL-TNT 596
+ + H R+ + D Q ++G++ +TN YA AGGQ+ D G + +
Sbjct: 505 KHF----QTSFHHNRAKDTQDGEQ-----YLGVVLKETNFYAEAGGQVADTGTVLIKKDG 555
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+G+ + ++ S G I+H G +S ++ G +VD + R HT +H+LN
Sbjct: 556 GATSGEFVVTDVQSYGGYILHAG-YLSWGNMSVGDQIVCQVDYQRRQKIAPNHTMTHVLN 614
Query: 657 AALRRVL--TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
ALR++ TC Q+ V ++ DF+ +S D + V++ + I + V +
Sbjct: 615 FALRKIFGPTCD-QRGSLVDPNKLRFDFAA-NRGMSRDDLKLVDEIVQAKIEEALPVVSK 672
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVF 762
+ + L I E YPD V ++ + + + R+P C GTH+
Sbjct: 673 VAPLASAMSIRSLRAIFNEQYPDPVRIVAVGGNIDEMLRDPENEMWYDYSVELCGGTHIS 732
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNV 815
NT E+ I G+R I LTG ++K A+ + + L + Q L V
Sbjct: 733 NTKVAEAFVTIEEGGVAKGIRRIVALTGKAAKQAIIDAQKLQDEVNLLQELPV 785
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F+N+GM QFK VFLG P R NSQKCIR GGKHNDL G+D
Sbjct: 29 IPFEDPTLLFINAGMNQFKPVFLGTVDPTSPLSKLKRACNSQKCIRAGGKHNDLEDVGKD 88
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K +A A+E LT+ LP +R+Y T+
Sbjct: 89 TYHHTFFEMLGNWSFGDYFKEEAIAWAMELLTQ-VFGLPKERMYATY 134
>gi|66475244|ref|XP_627438.1| alanyl-tRNA synthetase (with HxxxH domain) [Cryptosporidium parvum
Iowa II]
gi|46229265|gb|EAK90114.1| alanyl-tRNA synthetase (with HxxxH domain) [Cryptosporidium parvum
Iowa II]
Length = 1003
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 288/833 (34%), Positives = 426/833 (51%), Gaps = 99/833 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R F+ YF HT +SSP++P D +I F+N+GM QFK++FLG + R
Sbjct: 26 VRRQFVKYFEGLD-HTFYRSSPVIPLNDPTILFINAGMNQFKSIFLGTVEPNSELSKLVR 84
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VANSQKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K +A A + LT+
Sbjct: 85 VANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKEEAIEWAFKLLTQ-VYG 143
Query: 132 LPLDRLYFTYFGGSDQY-GLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+P DRLY TYFGG + P DEE + IWL+ +P D I G K NFWEM TGPCG
Sbjct: 144 IPKDRLYATYFGGDPKLPSCPPDEEAKRIWLKY-LPEDRILSCGSKENFWEMADTGPCGP 202
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIHYD G A++ VN D D+IEIWN+VF+ + R T+ PL K +DTG+G E
Sbjct: 203 CSEIHYDRIG-GRDAISLVNKDDPDVIEIWNLVFMQYYREVDSTLTPLPKKCVDTGMGLE 261
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKV---SGA---KPYGRTFTTSNRTDLDTSYRMLS 304
RLV+ILQNKTS YD DLF P+ + I +V SG + G+ + +D SYR++S
Sbjct: 262 RLVSILQNKTSNYDIDLFKPIFDQIHQVISSSGVQIPRYSGKVGDIDDPEMIDMSYRVIS 321
Query: 305 DYSRMITVALADNMFPDATAKLRNVVRDALLISEDVFK---VKQGKLVKELSY----NIA 357
D+ R +T+A+AD P R V +L + +K G + Y +++
Sbjct: 322 DHIRTLTIAIADGCIPSNEG--RGYVLRRILRRAIRYGSQYLKAGSNGEPWFYKLVDSVS 379
Query: 358 EILGDVYPEIQDSINKI-QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
I+G+ Y EI ++I I ++IL EE + L K E+FN
Sbjct: 380 NIMGNYYKEIPENIQIIKEVILDEEKQFSKTLFKGT--------------ERFN------ 419
Query: 417 LVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKL 476
V+ ++ +D + AF LY TYG ++ + +A + + F+ +
Sbjct: 420 KVINKLKSSQNNQQDQNKKLFPASEAFQLYSTYGFPMDLTELMANEQGFDFDRQGFQLCM 479
Query: 477 NELKERSKAKAASNV------PDIDLMDLKHFPV--TDDKYKYDYHYDTNSKRYTFPCLD 528
S+ K + PDI L F + TDD+YK Y T K +
Sbjct: 480 ENHHLASEGKNNKSFDDLILKPDIQNNLLLEFGLKETDDQYK--YQSQTQIKDFY----- 532
Query: 529 TNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI 588
+NL+ I G+Q+ +++ +++ +GLIFDKT Y+ +GGQ+ D
Sbjct: 533 SNLIAIFDGNQL----------------LNATEIQGKV-IGLIFDKTTFYSESGGQVADT 575
Query: 589 G-VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSS-FKVTPGLTSRVEVDARMRLGCM 646
G + + N E ++ + ++H G ++ +++P L S + VD R
Sbjct: 576 GFIDFQYNNNDEVSIFQVIDCKKFGNYVLHIGILLQGKIEISPELKSLMSVDYSRRNLIK 635
Query: 647 RAHTTSHLLNAALRRVL--TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
+ HT +H+LN ALR++L TC Q+ V ++ DFS + L++D + +EK IN +
Sbjct: 636 KNHTGTHILNFALRQILGSTCD-QRGSVVDPNKLRFDFSSQ-KPLTLDQIEEIEKMINQI 693
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS--------------DKENV 750
I + V + + S + ++ I GE YPD V ++ +S D+E V
Sbjct: 694 IQEKQTVYCQTVELSIAKQIPNIRAIFGETYPDPVRVLSVSKSVDSLINSQTDNNDQEKV 753
Query: 751 ISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
S E C GTHV NT I S ++I + G+R I +T + S+ A+EN K L
Sbjct: 754 -SIEFCGGTHVENTSEIISFSIISEEGIAKGIRRIVAVTDNQSEIAIENAKRL 805
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D +I F+N+GM QFK++FLG + RVANSQKCIR GGKHNDL G+D
Sbjct: 48 IPLNDPTILFINAGMNQFKSIFLGTVEPNSELSKLVRVANSQKCIRAGGKHNDLDDVGKD 107
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K +A A + LT+ +P DRLY T+
Sbjct: 108 VYHHTFFEMLGSWSFGDYFKEEAIEWAFKLLTQ-VYGIPKDRLYATY 153
>gi|255727014|ref|XP_002548433.1| alanyl-tRNA synthetase [Candida tropicalis MYA-3404]
gi|240134357|gb|EER33912.1| alanyl-tRNA synthetase [Candida tropicalis MYA-3404]
Length = 700
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 253/716 (35%), Positives = 369/716 (51%), Gaps = 67/716 (9%)
Query: 7 SSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP 66
S + +RS+FLDYF + HT V SS +VP+ D ++ F N+GM Q+K +FLG
Sbjct: 20 GSTTSWTAAKVRSTFLDYFKQNK-HTYVPSSSVVPHNDPTLLFANAGMNQYKPIFLGTVD 78
Query: 67 -----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMA 121
A R ANSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A +
Sbjct: 79 PASDFATLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIDFS 138
Query: 122 LEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWE 181
E LTK LP DRLY TYFGG ++ GL D E ++ WL++GVP DHI +K NFWE
Sbjct: 139 WELLTKV-YGLPEDRLYVTYFGGDEKQGLEPDLEAKEFWLKVGVPEDHILPGSVKDNFWE 197
Query: 182 MGSTGPCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
MG GPCG SEIH+D + G +S L VN D ++IE+WN+VFI R + + L
Sbjct: 198 MGDQGPCGPCSEIHFDRIGGRNASDL--VNMDDPNVIEVWNVVFIQFNREADGNLRSLPN 255
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV+ILQ+K+S YDTD+FLP+ + I +++G +PY F + ++ +DT+Y
Sbjct: 256 KHIDTGMGFERLVSILQDKSSNYDTDVFLPIFDKIREITGVRPYTGKFGSEDKDGIDTAY 315
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+++D+ R +T A+ D P+ + LR ++R G ++L +
Sbjct: 316 RVIADHVRTLTFAICDGGVPNNEGRGYVLRRILRRGSRYVRKYMNYPIGGFFQQLVDVVI 375
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
E +++PEI ++ IL EE F K L + + EQ+ I+
Sbjct: 376 EQNKEIFPEIASGAQDLKEILNEEELSFA----------KTLDRGEKLFEQYAII----- 420
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
++ P T +SG + LYDTYG ++ + +A L + FE+
Sbjct: 421 ----------ASKTPEQT-LSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEPGFERAKE 469
Query: 478 ELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSK-RYTFPCLDTNLVGIVI 536
E +E SK + + +D+ D K D TN + +Y + +VGI
Sbjct: 470 ESREASKGNGTKDGKTLVKLDVHALSELD---KNDAIPKTNDEFKYGTENVKATVVGIYD 526
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
G + +DSI+ + + G++ DKT YA GGQ D G +
Sbjct: 527 GSKF----------------VDSIE-DSSVQCGILLDKTPFYAEQGGQEYDTGKIVIDGK 569
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
++ N + + G ++H GN++ K++ G D R HT +H+LN
Sbjct: 570 SEFN----VSNVQVYAGYVLHTGNILEG-KLSVGDEIIATYDELRRWPIRNNHTGTHILN 624
Query: 657 AALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
ALR VL QK V ++ DFS + + LS + VE N I N +V
Sbjct: 625 FALREVLGDGVDQKGSLVAPEKLRFDFS-HKQALSPKELEKVEAISNKYIKNNDKV 679
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG A R ANSQKCIR GGKHNDL GRD
Sbjct: 52 VPHNDPTLLFANAGMNQYKPIFLGTVDPASDFATLKRAANSQKCIRAGGKHNDLEDVGRD 111
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK LP DRLY T+
Sbjct: 112 SYHHTFFEMLGNWSFGDYFKKEAIDFSWELLTK-VYGLPEDRLYVTY 157
>gi|395332352|gb|EJF64731.1| hypothetical protein DICSQDRAFT_51965 [Dichomitus squalens LYAD-421
SS1]
Length = 959
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 276/837 (32%), Positives = 399/837 (47%), Gaps = 95/837 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + +R F +F ++ H V SS +PY D ++ F N+GM QFK++FLG T P+
Sbjct: 12 LTAAQVREHFFAFF-RSKDHPYVPSSSTIPYEDPTLLFANAGMNQFKSIFLG-TVDPHSE 69
Query: 72 VA------NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
+A NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + E L
Sbjct: 70 LARLKRAFNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAISYSWELL 129
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
T LP D+LY TYF G + GL D E + WL GV DHI K NFWEMG+T
Sbjct: 130 TGV-YKLPKDQLYVTYFEGDPKNGLEPDLEAKQYWLATGVAEDHIIPGNAKDNFWEMGAT 188
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG SEIH+D G ++A RVN D D++EIWN VFI R ++ PL ++DT
Sbjct: 189 GPCGPCSEIHFDRIGGRNAA-DRVNQDDPDVLEIWNNVFIQFNREEDGSLRPLPAKHVDT 247
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV+++QNK S YDTD+F PL I++++G + Y F + +DT+YR+++D
Sbjct: 248 GMGFERLVSVVQNKRSNYDTDVFAPLFAKIQELTGVRAYAGKFGDEDPDGVDTAYRVIAD 307
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R +T AL+D P+ + LR ++R + V G L + E +G
Sbjct: 308 HVRTLTFALSDGGVPNNVGRGYVLRRILRRGARFARKKLGVPIGAFFSSLVPVVVEQMGS 367
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
V+PEI ++I+ IL EE E F+ + G L +
Sbjct: 368 VFPEITQKYDEIKEILDEEE------------------------ESFSRTLDRGEKLFEQ 403
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
Y K L + E+SG + LYDTYG ++ + +A L + FE KE
Sbjct: 404 YAKKAL--EAGQKELSGKDVWRLYDTYGFPVDLTRLMAEELGLGVNEAEFEAAQAASKEA 461
Query: 483 SKA---KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
SKA K A +D+ D+ P TDD +K+ G
Sbjct: 462 SKAGVKKGAGETVALDVHDIAALEKNVDVPKTDDSFKFQR-------------------G 502
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
+ V +K A ++ + GLI D+T+ YA +GGQ D G +
Sbjct: 503 SITAKVVAIYNKKAFLKTTG-------EIPEDTTFGLILDRTSFYAESGGQEYDTGSIII 555
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
+ E+ + G ++H G + K+ G D R HT +H
Sbjct: 556 DGVAE----FEVTNVQVFNGYVLHIGRMKYG-KLAVGDEIVSSYDELRRWPLRNNHTATH 610
Query: 654 LLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
+LN +LR VL QK V + DFS + ++ +A +E D + V V
Sbjct: 611 ILNYSLREVLGDHIDQKGSLVAPTKLRFDFS-HKAQVTPAELAKIEALSQDWVRRNVGVY 669
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKENVISR----EPCCGTH 760
+ + + L + GE YPD V ++ + D EN R E C GTH
Sbjct: 670 AKELALPVAQKIHSLRAVFGESYPDPVRVVALEYPVEEIAQDLENPRWRKTSIELCGGTH 729
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGN 817
V TG I+ V G+R + +TG + A G+ L+ A ++I ++G+
Sbjct: 730 VAKTGEIKDFIVTEESGIAKGIRRVVAVTGHEAAEARRQGESLT--AQLNRIESLGD 784
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 75/108 (69%), Gaps = 8/108 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA------NSQKCIRVGGKHNDLSFAGR 871
IPY D ++ F N+GM QFK++FLG T P+ +A NSQKCIR GGKHNDL G+
Sbjct: 39 IPYEDPTLLFANAGMNQFKSIFLG-TVDPHSELARLKRAFNSQKCIRAGGKHNDLEDVGK 97
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
DSYHHTFFEMLGNWSF DY+K++A + E LT LP D+LY T+
Sbjct: 98 DSYHHTFFEMLGNWSFGDYFKKEAISYSWELLTG-VYKLPKDQLYVTY 144
>gi|349581482|dbj|GAA26640.1| K7_Ala1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 958
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 273/838 (32%), Positives = 408/838 (48%), Gaps = 104/838 (12%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++R++FLDYF ++ H VKSSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQKWTATNVRNTFLDYF-KSKEHKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
PA R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 62 DPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ LT+ +P DRLY TYF G ++ GL D E R++W +GVP DHI K NFW
Sbjct: 122 SWTLLTEV-YGIPKDRLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D D++E+WN+VFI R ++ PL
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F PL E I++++ +PY F +++ +DT+Y
Sbjct: 240 KHIDTGMGFERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R +T ALAD P+ + LR ++R + G L+ +
Sbjct: 300 RVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ D++PE+ + IL EE F KT E+
Sbjct: 360 SQVQDIFPELAKDPAFLFEILDEEEASF--------------AKTLDRGER--------- 396
Query: 418 VLGVKYLTKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
L ++ A S TE + G + LYDTYG ++ + +A + L + FE+
Sbjct: 397 ------LFEKYASAASKTESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEK 450
Query: 475 KLNELKERSKAKAASNVPDI---------DLMDLKHFPVTDDKYKYDYHYDTNSKRYTFP 525
E E SK + D+ +L D K P T+D++KY
Sbjct: 451 AKQESYEASKRGGKKDQSDLIKLNVHELSELNDAK-VPKTNDEFKYG------------- 496
Query: 526 CLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQI 585
N+ G ++ G + E G+I DKT YA GGQ
Sbjct: 497 --SANVEGTIL-------------KLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQE 541
Query: 586 DDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
D G + + + N VE +L + G + H G++ K++ G D R
Sbjct: 542 YDTGKIVIDDAAEFN--VENVQLYN--GFVFHTGSLEEG-KLSVGDKIIASFDELRRFPI 596
Query: 646 MRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
HT +H+LN AL+ L QK V ++ DFS + + +S + + VE N+
Sbjct: 597 KNNHTGTHILNFALKETLGNDVDQKGSLVAPEKLRFDFS-HKKAVSNEELKKVEDICNEQ 655
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVIS 752
I +QV + + + + + GE YPD V ++ + +++ S
Sbjct: 656 IKENLQVFYKEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYS 715
Query: 753 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG----DSSKAAVENGKHLSTA 806
E C GTHV TG I+ ++ G+R I +TG ++ + A + G L A
Sbjct: 716 IEFCGGTHVNKTGDIKYFVILEESGIAKGIRRIVAVTGTEAFEAQRLAEQFGTDLDAA 773
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + PA R NSQKCIR GGKHNDL G+D
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFLGTVDPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + LT+ +P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAITYSWTLLTE-VYGIPKDRLYVTY 141
>gi|412988532|emb|CCO17868.1| alanyl-tRNA synthetase [Bathycoccus prasinos]
Length = 1194
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 270/825 (32%), Positives = 409/825 (49%), Gaps = 102/825 (12%)
Query: 13 CSKS---IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPY 69
CS S +R++F +F + HT+V SSP+VP+ D ++ F N+GM QFK +FLG
Sbjct: 245 CSWSAAKVRNTFTSFFESKHAHTIVPSSPVVPHDDPTLLFANAGMNQFKPIFLGTCDPKS 304
Query: 70 P-----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEF 124
P RV +SQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K A MA E
Sbjct: 305 PLYTLKRVTDSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEGAISMAWEL 364
Query: 125 LTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGS 184
LT+ + DRLY TYFGG + GL D E RDIWL+ +P + NFWEMG
Sbjct: 365 LTEV-YKIDPDRLYATYFGGDPKQGLEPDLEARDIWLKF-LPASKVLPFDCADNFWEMGD 422
Query: 185 TGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
TGPCG +EIH+D G A + VN D + +EIWN+VFI + R + PL ++D
Sbjct: 423 TGPCGPCTEIHFDRIGN-RDASSLVNMDDPNCLEIWNLVFIQYNREEGGVLKPLPSKHVD 481
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
TG+GFERL + LQ++ S YDTD+FLP+ I++V+G+ PY ++ + D +YR+++
Sbjct: 482 TGMGFERLASCLQDRPSNYDTDVFLPIFREIQRVTGSSPYTGLLGVADAGEKDMAYRVVA 541
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D+ R +TVA+AD P + + LR V+R A+ + KQG +L + ++LG
Sbjct: 542 DHVRTLTVAIADGASPGSDGRNYVLRRVLRRAVRFGREKLNAKQG-FFHKLVPTVVKMLG 600
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
+ +PEI+ EE R+ + + + K L+K +E+F + E
Sbjct: 601 ETFPEIKK----------EEKRVIEIIAEEEESFGKTLLKG---IEKFKKIAEG------ 641
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
AR + ISG AF L++++G ++ + + LTL +E F+Q +E
Sbjct: 642 -------ARGENRNVISGVEAFLLWESFGFPNDLTEIMCEENGLTLNNEEFDQVFKAAQE 694
Query: 482 RSKAKAASNVPDIDL---------MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
+S+ + N +DL + + T+D +KY + P +DT +
Sbjct: 695 KSRMSSKKNT-GVDLLFQAEATAWLSNNNIATTNDSFKYVKN---------VPKVDTTVK 744
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
I+ F +SG GLI + T YA +GGQ+ D G
Sbjct: 745 AILTSSDGFVQST----EGQSGP------------FGLILESTPFYAESGGQVSDTG--- 785
Query: 593 LTNTTQENGK-VEIGELASLEGKIVHFGNVVS--SFKVTPGLTSRVEVDARMRLGCMRAH 649
+ NGK + + E + G I+H V+S S V+ G +VD R M H
Sbjct: 786 ---SLNVNGKDLSVSEAKAAAGYILH---VLSDDSVSVSVGDACTAQVDVARRSDIMPNH 839
Query: 650 TTSHLLNAALRRVLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +H++N ALR VL + V DE DFS + + ++ + + +N I
Sbjct: 840 TMTHVVNFALREVLGNDVNQKGSVVDDEKLRFDFS-HNKPVTAKQIQEAQDIVNSQIKEN 898
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------C 756
+ V R + ++ + L + GE+YPD V ++ + + + P C
Sbjct: 899 LSVHTREVALTDAQKINGLRAVFGEVYPDPVRVVSVGPAIDDLLSNPSNEAWAKRSIEFC 958
Query: 757 CGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGK 801
GTH+ +T E +I G+R I T ++ A +N K
Sbjct: 959 GGTHLKSTAEAEDFAIIEEVGTAKGIRRITAATKGQARQAFQNAK 1003
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P RV +SQKCIR GGKHNDL G+D
Sbjct: 275 VPHDDPTLLFANAGMNQFKPIFLGTCDPKSPLYTLKRVTDSQKCIRAGGKHNDLDDVGKD 334
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K A MA E LT+ + DRLY T+
Sbjct: 335 TYHHTFFEMLGNWSFGDYFKEGAISMAWELLTE-VYKIDPDRLYATY 380
>gi|323303022|gb|EGA56826.1| Ala1p [Saccharomyces cerevisiae FostersB]
Length = 810
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 267/817 (32%), Positives = 399/817 (48%), Gaps = 98/817 (11%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++R++FLDYF + + H VKSSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQKWTATNVRNTFLDYFKSKE-HKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
PA R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 62 DPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ LT+ +P DRLY TYF G ++ GL D E R++W +GVP DHI K NFW
Sbjct: 122 SWTLLTEV-YGIPKDRLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D D++E+WN+VFI R ++ PL
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F PL E I++++ +PY F +++ +DT+Y
Sbjct: 240 KHIDTGMGFERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R +T ALAD P+ + LR ++R + G L+ +
Sbjct: 300 RVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ D++PE+ + IL EE F KT E+
Sbjct: 360 SQVQDIFPELAKDPAFLFEILDEEEASF--------------AKTLDRGER--------- 396
Query: 418 VLGVKYLTKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
L ++ A S TE + G + LYDTYG ++ + +A + L + FE+
Sbjct: 397 ------LFEKYASAASKTESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEK 450
Query: 475 KLNELKERSKAKAAS--------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPC 526
E E SK NV ++ ++ P T+D++KY
Sbjct: 451 AKQESYEASKRGGKKDQSDLIKLNVHELSELNDAKVPKTNDEFKYG-------------- 496
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
N+ G ++ G + E G+I DKT YA GGQ
Sbjct: 497 -SANVEGTIL-------------KLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEY 542
Query: 587 DIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCM 646
D G + + + N VE +L + G + H G++ K++ G D R
Sbjct: 543 DTGKIVIDDAAEFN--VENVQLYN--GFVFHTGSLEEG-KLSVGDKIIASFDELRRFPIK 597
Query: 647 RAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI 705
HT +H+LN AL+ L QK V ++ DFS + + +S + + VE N+ I
Sbjct: 598 NNHTGTHILNFALKETLGNDVDQKGSLVAPEKLRFDFS-HKKAVSNEELKKVEDICNEQI 656
Query: 706 ANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISR 753
+QV + + + + + GE YPD V ++ + +++ S
Sbjct: 657 KENLQVFYKEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYSI 716
Query: 754 EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
E C GTHV TG I+ ++ G+R I +TG
Sbjct: 717 EFCGGTHVNKTGDIKYFVILEESGIAKGIRRIVAVTG 753
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + PA R NSQKCIR GGKHNDL G+D
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFLGTVDPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + LT+ +P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAITYSWTLLTE-VYGIPKDRLYVTY 141
>gi|323335374|gb|EGA76661.1| Ala1p [Saccharomyces cerevisiae Vin13]
gi|323346372|gb|EGA80661.1| Ala1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365762987|gb|EHN04519.1| Ala1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 958
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 269/818 (32%), Positives = 400/818 (48%), Gaps = 100/818 (12%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++R++FLDYF + + H VKSSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQKWTATNVRNTFLDYFKSKE-HKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
PA R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 62 DPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ LT+ +P DRLY TYF G ++ GL D E R++W +GVP DHI K NFW
Sbjct: 122 SWTLLTEV-YGIPKDRLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D D++E+WN+VFI R ++ PL
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F PL E I++++ +PY F +++ +DT+Y
Sbjct: 240 KHIDTGMGFERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R +T ALAD P+ + LR ++R + G L+ +
Sbjct: 300 RVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ D++PE+ + IL EE F KT E+
Sbjct: 360 SQVQDIFPELAKDPAFLFEILDEEEASF--------------AKTLDRGER--------- 396
Query: 418 VLGVKYLTKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
L ++ A S TE + G + LYDTYG ++ + +A + L + FE+
Sbjct: 397 ------LFEKYASAASKTESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEK 450
Query: 475 KLNELKERSKAKAASNVPDI---------DLMDLKHFPVTDDKYKYDYHYDTNSKRYTFP 525
E E SK + D+ +L D K P T+D++KY
Sbjct: 451 AKQESYEASKRGGKKDQSDLIKLNVHELSELNDAK-VPKTNDEFKYG------------- 496
Query: 526 CLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQI 585
N+ G ++ G + E G+I DKT YA GGQ
Sbjct: 497 --SANVEGTIL-------------KLHDGTNFVDEITEPGKXYGIILDKTCFYAEQGGQE 541
Query: 586 DDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
D G + + + N VE +L + G + H G++ K++ G D R
Sbjct: 542 YDTGKIVIDDAAEFN--VENVQLYN--GFVFHTGSLEEG-KLSVGDKIIASFDELRRFPI 596
Query: 646 MRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
HT +H+LN AL+ L QK V ++ DFS + + +S + + VE N+
Sbjct: 597 KNNHTGTHILNFALKETLGNDVDQKGSLVAPEKLRFDFS-HKKAVSNEELKKVEDICNEQ 655
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVIS 752
I +QV + + + + + GE YPD V ++ + +++ S
Sbjct: 656 IKENLQVFYKEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYS 715
Query: 753 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
E C GTHV TG I+ ++ G+R I +TG
Sbjct: 716 IEFCGGTHVNKTGDIKYFVILEESGIAKGIRRIVAVTG 753
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + PA R NSQKCIR GGKHNDL G+D
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFLGTVDPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + LT+ +P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAITYSWTLLTE-VYGIPKDRLYVTY 141
>gi|441597619|ref|XP_004087394.1| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase, cytoplasmic
[Nomascus leucogenys]
Length = 912
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 267/812 (32%), Positives = 397/812 (48%), Gaps = 113/812 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ + + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + ++ I+ EE F +KT L G +
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF--------------LKT--------------LSRGRRI 392
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KLNELKE 481
L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL +LK
Sbjct: 393 LDRKIQSLGDSKNIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS 452
Query: 482 RSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ K ++ +D+ + + VTDD KY+YH D+ S Y F V
Sbjct: 453 QGKGAGGEDLIMLDIYAIEELRARGLEVTDDSPKYNYHLDS-SGSYVFET-------PVA 504
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-VAYLTN 595
+K + +G G++ DKT YA GGQI D G + + +
Sbjct: 505 TXDALRREKMFVEEVSTGQE-----------CGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
++++ + + G ++H G + KV G R+ +D ++
Sbjct: 554 SSEDKTEFTVKNAQVRGGYVLHIGTIYGDLKV--GDQVRLFIDEILK------------- 598
Query: 656 NAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
V + Q S V++ +C L + + + ++ + V+V
Sbjct: 599 ---NEEVGSGMXQSSRPVYTQDCPL--------AAAKGIQGLRAVFDETYPDPVRVVSIG 647
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKE-NVISREPCCGTHVFNTGHIESCTVIG 774
+ SEL L D S ++ S E C GTH+ N+ H + ++
Sbjct: 648 VPVSEL-------------------LDDPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVT 688
Query: 775 YKSYNHGVRSIKCLTGDSSKAAVENGKHLSTA 806
++ G+R I +TG ++ A + K S A
Sbjct: 689 EEAIAKGIRRIVAVTGAEAQKAPGSTKQGSRA 720
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPVERLYVTY 137
>gi|313221903|emb|CBY38956.1| unnamed protein product [Oikopleura dioica]
Length = 934
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 261/815 (32%), Positives = 404/815 (49%), Gaps = 95/815 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
+ + +R FLD+F + H V SS +P+ D ++ F N+GM QFK++F+G P
Sbjct: 5 ITANEVRQQFLDFFKERE-HPYVHSSSTIPHDDPTLLFANAGMNQFKSIFVGTIDPSSPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
NSQKC+R GGKHNDL G+DSYHHTFFEMLG+WSF DY+K++A + + + L
Sbjct: 64 AKLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGSWSFGDYFKKEAIQWSFDLLN 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K +P DRLY TYF G+ + GL D E R+ WL+ +P D I K NFWEMG TG
Sbjct: 124 KV-WGIPADRLYATYFEGNPEEGLEPDNEAREEWLKY-LPADQILPGNAKDNFWEMGDTG 181
Query: 187 PCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
PCG SE+HYD + G +S+L VN D D++EIWN+VF+ + R + +++ L +DT
Sbjct: 182 PCGPCSELHYDRIGGRNASSL--VNMDDPDVLEIWNLVFMQYDRQADKSLISLPAKSVDT 239
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+V++LQ+K + YDTD+F P + IE ++G + Y F ++ +D +YR+L+D
Sbjct: 240 GMGLERVVSVLQDKRANYDTDMFSPYFKKIEDLTGTRAYTGLFGAEDKDGVDMAYRVLAD 299
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
++R +++ALAD PD + LR ++R A+ + K+K V L + E LGD
Sbjct: 300 HARTLSIALADGGRPDNVGRGYVLRRILRRAIRYGHEKLKMKVDDFVA-LVDVVVESLGD 358
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE++ + IL E EW +KT L G K
Sbjct: 359 AFPELKKDPESTKEILKE--------------EWIQFMKT--------------LDRGQK 390
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L +++ + + GD+A+ LYDTYG ++ +A LTL E FE++ + ER
Sbjct: 391 ILERKIKQLNLTDRLPGDVAWLLYDTYGFPLDLTTLIAEEHNLTLSCEEFEEERQKAIER 450
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
SK TDD +K +Y ++ + YTF + +V + +
Sbjct: 451 SKGADG-------------VATTDDSHKQNYEANS-AGEYTFNSIKAKVVALRFNKEFH- 495
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
Q + VG++ DKTN YA GGQI D+G Y + ++ +
Sbjct: 496 ------------------QECESCEVGIVLDKTNFYAEQGGQIYDLG--YFSRENDDDFE 535
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
+ + G ++H G +V K++ G + +D R+ M HT +H+LN LR V
Sbjct: 536 FNVKNVQVRAGYVLHVGTLVG--KLSVGDEINLNIDTERRVNIMPNHTGTHVLNFGLRCV 593
Query: 663 L--TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
L QK V + DF+ G L + VE+ N+VI V + ++
Sbjct: 594 LGEGEADQKGSLVAPERLRFDFTAGG-ALKPAQIKQVEEICNEVITRGGAVHCQVSPLAQ 652
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFNTGHIE 768
+ L + E YPD V ++ I N + P C GTH+ + H
Sbjct: 653 SKAIQGLRAMFDETYPDPVRVVSIGVPVNELLENPTSGAADKTSVEFCGGTHLRDISHAR 712
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
+ ++ + G+R + +TG ++ A + L
Sbjct: 713 KLIITAEEAISKGIRRMIAVTGAEAEKADRQAQRL 747
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK++F+G P NSQKCIR GGKHNDL G+D
Sbjct: 32 IPHDDPTLLFANAGMNQFKSIFVGTIDPSSPMAKLKSAVNSQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLG+WSF DY+K++A + + + L K +P DRLY T+
Sbjct: 92 SYHHTFFEMLGSWSFGDYFKKEAIQWSFDLLNK-VWGIPADRLYATY 137
>gi|323307226|gb|EGA60508.1| Ala1p [Saccharomyces cerevisiae FostersO]
Length = 833
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 267/817 (32%), Positives = 399/817 (48%), Gaps = 98/817 (11%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++R++FLDYF + + H VKSSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQKWTATNVRNTFLDYFKSKE-HKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
PA R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 62 DPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ LT+ +P DRLY TYF G ++ GL D E R++W +GVP DHI K NFW
Sbjct: 122 SWTLLTEV-YGIPKDRLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D D++E+WN+VFI R ++ PL
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F PL E I++++ +PY F +++ +DT+Y
Sbjct: 240 KHIDTGMGFERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R +T ALAD P+ + LR ++R + G L+ +
Sbjct: 300 RVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ D++PE+ + IL EE F KT E+
Sbjct: 360 SQVQDIFPELAKDPAFLFEILDEEEASF--------------AKTLDRGER--------- 396
Query: 418 VLGVKYLTKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
L ++ A S TE + G + LYDTYG ++ + +A + L + FE+
Sbjct: 397 ------LFEKYASAASKTESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEK 450
Query: 475 KLNELKERSKAKAAS--------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPC 526
E E SK NV ++ ++ P T+D++KY
Sbjct: 451 AKQESYEASKRGGKKDQSDLIKLNVHELSELNDAKVPKTNDEFKYG-------------- 496
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
N+ G ++ G + E G+I DKT YA GGQ
Sbjct: 497 -SANVEGTIL-------------KLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEY 542
Query: 587 DIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCM 646
D G + + + N VE +L + G + H G++ K++ G D R
Sbjct: 543 DTGKIVIDDAAEFN--VENVQLYN--GFVFHTGSLEEG-KLSVGDKIIASFDELRRFPIK 597
Query: 647 RAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI 705
HT +H+LN AL+ L QK V ++ DFS + + +S + + VE N+ I
Sbjct: 598 NNHTGTHILNFALKETLGNDVDQKGSLVAPEKLRFDFS-HKKAVSNEELKKVEDICNEQI 656
Query: 706 ANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISR 753
+QV + + + + + GE YPD V ++ + +++ S
Sbjct: 657 KENLQVFYKEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYSI 716
Query: 754 EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
E C GTHV TG I+ ++ G+R I +TG
Sbjct: 717 EFCGGTHVNKTGDIKYFVILEESGIAKGIRRIVAVTG 753
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + PA R NSQKCIR GGKHNDL G+D
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFLGTVDPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + LT+ +P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAITYSWTLLTE-VYGIPKDRLYVTY 141
>gi|260942927|ref|XP_002615762.1| hypothetical protein CLUG_04644 [Clavispora lusitaniae ATCC 42720]
gi|238851052|gb|EEQ40516.1| hypothetical protein CLUG_04644 [Clavispora lusitaniae ATCC 42720]
Length = 964
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 272/829 (32%), Positives = 414/829 (49%), Gaps = 83/829 (10%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
+ ++RS+FLDYF N + HT V SS +VP+ D ++ F N+GM Q+K +FLG A
Sbjct: 19 SASTVRSTFLDYFKN-KSHTYVPSSSVVPHNDPTLLFANAGMNQYKPIFLGTVDPTSEFA 77
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
R NSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A + E LT+
Sbjct: 78 TLKRAVNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIAYSWELLTE 137
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
L DRLY TYF G ++ GL D E ++ WL +GV DHI NFWEMG GP
Sbjct: 138 V-YKLDKDRLYVTYFEGDEKNGLEPDLEAKEYWLSVGVAPDHILPGDAHDNFWEMGDQGP 196
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIHYD G ++A + VN D +++E+WNIVFI + R + ++ PL +IDTG+
Sbjct: 197 CGPCSEIHYDRIGGRNAA-SLVNQDDPNVLEVWNIVFIQYNREADSSLKPLPSKHIDTGM 255
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV++LQ+K+S YDTD+F P+ E I ++G +PY F + +DT+YR+++D+
Sbjct: 256 GFERLVSVLQDKSSNYDTDVFQPIFEEIRNITGVRPYTGKFGAEDVDGIDTAYRVIADHV 315
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T A++D P+ + LR ++R G ++L + E ++
Sbjct: 316 RTLTFAISDGGVPNNEGRGYVLRRILRRGARYVRKYMNCPIGSFFQQLVDVVIENNSSIF 375
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI + + ++ IL EE F K L + + EQ+ I+
Sbjct: 376 PEIAKNKDMLKEILMEEEVSFA----------KTLDRGEKLFEQYAII------------ 413
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
++ P T +SG + LYDTYG ++ + +A L + EAFE+ E +E SK
Sbjct: 414 ---ASKTPEQT-LSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEEAFEKAKEESREASK 469
Query: 485 A---KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
A K + + +D+ L + K + Y +Y +++ +V I G +
Sbjct: 470 ATNTKGGATLIKLDVHALSELDNNESITKTNDVY-----KYGLDNIESKIVAIYDGSKF- 523
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
+D+I E G+I D+T YA GGQ D G + + +
Sbjct: 524 ---------------VDTIS-EAGQQFGIILDRTPFYAEQGGQEYDTGSLVIDGSAE--- 564
Query: 602 KVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
+ + S I+H G +V + K+ + + D R HT +H+LN AL+
Sbjct: 565 -FAVTNVQSYGSYILHTGTMVEGTLKLNDNVIAT--YDELRRWPIRNNHTGTHVLNFALK 621
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
VL QK V ++ DFS + + L+ + VE +++I + QV + +
Sbjct: 622 EVLGDGIDQKGSLVAPEKLRFDFS-HKQALTPKELEQVENISSEIIKSNKQVYAEEVELT 680
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDIS--------DKENV----ISREPCCGTHVFNTGHI 767
+ + + + GE YPD V ++ I D N +S E C GTHV TG I
Sbjct: 681 KAKQIAGVRAVFGETYPDPVRVVSIGVAVADLLKDPTNQDWTKLSIEFCGGTHVAKTGDI 740
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVG 816
+ +I G+R I +TG ++ + S + + L+ G
Sbjct: 741 KDFVIIEESGIAKGIRRIVAVTGHEAQEVQRIAREFSASLDSADKLSFG 789
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG A R NSQKCIR GGKHNDL GRD
Sbjct: 45 VPHNDPTLLFANAGMNQYKPIFLGTVDPTSEFATLKRAVNSQKCIRAGGKHNDLEDVGRD 104
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LT+ L DRLY T+
Sbjct: 105 SYHHTFFEMLGNWSFGDYFKKEAIAYSWELLTE-VYKLDKDRLYVTY 150
>gi|398366285|ref|NP_014980.3| alanine--tRNA ligase [Saccharomyces cerevisiae S288c]
gi|1163069|emb|CAA89980.1| ALA1 [Saccharomyces cerevisiae]
gi|1420729|emb|CAA99658.1| ALA1 [Saccharomyces cerevisiae]
gi|285815203|tpg|DAA11096.1| TPA: alanine--tRNA ligase [Saccharomyces cerevisiae S288c]
gi|392296662|gb|EIW07764.1| Ala1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 958
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 269/818 (32%), Positives = 400/818 (48%), Gaps = 100/818 (12%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++R++FLDYF + + H VKSSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQKWTATNVRNTFLDYFKSKE-HKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
PA R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 62 DPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ LT+ +P DRLY TYF G ++ GL D E R++W +GVP DHI K NFW
Sbjct: 122 SWTLLTEV-YGIPKDRLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D D++E+WN+VFI R ++ PL
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F PL E I++++ +PY F +++ +DT+Y
Sbjct: 240 KHIDTGMGFERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R +T ALAD P+ + LR ++R + G L+ +
Sbjct: 300 RVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ D++PE+ + IL EE F KT E+
Sbjct: 360 SQVQDIFPELAKDPAFLFEILDEEEASF--------------AKTLDRGER--------- 396
Query: 418 VLGVKYLTKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
L ++ A S TE + G + LYDTYG ++ + +A + L + FE+
Sbjct: 397 ------LFEKYASAASKTESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEK 450
Query: 475 KLNELKERSKAKAASNVPDI---------DLMDLKHFPVTDDKYKYDYHYDTNSKRYTFP 525
E E SK + D+ +L D K P T+D++KY
Sbjct: 451 AKQESYEASKRGGKKDQSDLIKLNVHELSELNDAK-VPKTNDEFKYG------------- 496
Query: 526 CLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQI 585
N+ G ++ G + E G+I DKT YA GGQ
Sbjct: 497 --SANVEGTIL-------------KLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQE 541
Query: 586 DDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
D G + + + N VE +L + G + H G++ K++ G D R
Sbjct: 542 YDTGKIVIDDAAEFN--VENVQLYN--GFVFHTGSLEEG-KLSVGDKIIASFDELRRFPI 596
Query: 646 MRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
HT +H+LN AL+ L QK V ++ DFS + + +S + + VE N+
Sbjct: 597 KNNHTGTHILNFALKETLGNDVDQKGSLVAPEKLRFDFS-HKKAVSNEELKKVEDICNEQ 655
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVIS 752
I +QV + + + + + GE YPD V ++ + +++ S
Sbjct: 656 IKENLQVFYKEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYS 715
Query: 753 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
E C GTHV TG I+ ++ G+R I +TG
Sbjct: 716 IEFCGGTHVNKTGDIKYFVILEESGIAKGIRRIVAVTG 753
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + PA R NSQKCIR GGKHNDL G+D
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFLGTVDPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + LT+ +P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAITYSWTLLTE-VYGIPKDRLYVTY 141
>gi|190407630|gb|EDV10897.1| alanyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
gi|207340860|gb|EDZ69081.1| YOR335Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259149812|emb|CAY86616.1| Ala1p [Saccharomyces cerevisiae EC1118]
gi|323352223|gb|EGA84760.1| Ala1p [Saccharomyces cerevisiae VL3]
Length = 958
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 269/818 (32%), Positives = 400/818 (48%), Gaps = 100/818 (12%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++R++FLDYF + + H VKSSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQKWTATNVRNTFLDYFKSKE-HKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
PA R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 62 DPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ LT+ +P DRLY TYF G ++ GL D E R++W +GVP DHI K NFW
Sbjct: 122 SWTLLTEV-YGIPKDRLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D D++E+WN+VFI R ++ PL
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F PL E I++++ +PY F +++ +DT+Y
Sbjct: 240 KHIDTGMGFERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R +T ALAD P+ + LR ++R + G L+ +
Sbjct: 300 RVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ D++PE+ + IL EE F KT E+
Sbjct: 360 SQVQDIFPELAKDPAFLFEILDEEEASF--------------AKTLDRGER--------- 396
Query: 418 VLGVKYLTKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
L ++ A S TE + G + LYDTYG ++ + +A + L + FE+
Sbjct: 397 ------LFEKYASAASKTESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEK 450
Query: 475 KLNELKERSKAKAASNVPDI---------DLMDLKHFPVTDDKYKYDYHYDTNSKRYTFP 525
E E SK + D+ +L D K P T+D++KY
Sbjct: 451 AKQESYEASKRGGKKDQSDLIKLNVHELSELNDAK-VPKTNDEFKYG------------- 496
Query: 526 CLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQI 585
N+ G ++ G + E G+I DKT YA GGQ
Sbjct: 497 --SANVEGTIL-------------KLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQE 541
Query: 586 DDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
D G + + + N VE +L + G + H G++ K++ G D R
Sbjct: 542 YDTGKIVIDDAAEFN--VENVQLYN--GFVFHTGSLEEG-KLSVGDKIIASFDELRRFPI 596
Query: 646 MRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
HT +H+LN AL+ L QK V ++ DFS + + +S + + VE N+
Sbjct: 597 KNNHTGTHILNFALKETLGNDVDQKGSLVAPEKLRFDFS-HKKAVSNEELKKVEDICNEQ 655
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVIS 752
I +QV + + + + + GE YPD V ++ + +++ S
Sbjct: 656 IKENLQVFYKEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYS 715
Query: 753 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
E C GTHV TG I+ ++ G+R I +TG
Sbjct: 716 IEFCGGTHVNKTGDIKYFVILEESGIAKGIRRIVAVTG 753
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + PA R NSQKCIR GGKHNDL G+D
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFLGTVDPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + LT+ +P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAITYSWTLLTE-VYGIPKDRLYVTY 141
>gi|50310341|ref|XP_455190.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644326|emb|CAG97897.1| KLLA0F02431p [Kluyveromyces lactis]
Length = 956
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 267/809 (33%), Positives = 403/809 (49%), Gaps = 82/809 (10%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++RS+FLDYF ++GHT V SSP++P+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKSKWTAANVRSTFLDYF-KSKGHTFVPSSPVIPFDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPA----PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
P+ R NSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A
Sbjct: 62 DPSSDFYKLKRATNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIEY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ E LTK +P DRLY TYF G ++ GL D E RD+W +GV DHI K NFW
Sbjct: 122 SWELLTKV-YGIPGDRLYVTYFEGDEKLGLEPDFEARDLWKSVGVKDDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SE+HYD G ++A VN D D++EIWN VFI R ++ L
Sbjct: 181 EMGEQGPCGPCSEVHYDRIGGRNAAHL-VNQDDPDVLEIWNNVFIQFNREQDRSLRALPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
++DTG+GFERLV++L + S YDTD+F PL I++++G + Y F + +DT+Y
Sbjct: 240 KHVDTGMGFERLVSVLHDVRSNYDTDVFEPLFNRIQEITGVRSYTGKFGAEDTDGIDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R +T ALAD P+ + LR ++R + G +LS +
Sbjct: 300 RVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSQLSVTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
E + D++PE+ + + IL EE F K L + + E
Sbjct: 360 EQVKDMFPEVARDPSYLFEILDEEEASF----------AKTLDRGEKLFE---------- 399
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
KY L + + + G + LYDTYG ++ + +A + L + FE+
Sbjct: 400 ----KYAEDALKK--ADKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDTIGFEKAKQ 453
Query: 478 ELKERSKA---KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
E E SK K AS++ +++ +L D+ K D +S +Y ++ ++ I
Sbjct: 454 ESYEASKKGGKKGASDLIRLNVHELSQLN-GDNVAKTD-----DSSKYGTENVEATILRI 507
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
G++ +DS+ E G+I DKT YA GGQ D G +
Sbjct: 508 YDGEKF----------------VDSMT-EIGKQYGVILDKTCFYAEQGGQEFDTGKLVID 550
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+ N + + + G + H G++ K++ G + + R HT +H+
Sbjct: 551 GEAEFN----VDNVQAYNGYVFHTGSLGDG-KLSIGDSIIASYEELRRHPLRNNHTGTHI 605
Query: 655 LNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN AL+ VL QK V ++ DFS + LS + + VEK N+ I + + V
Sbjct: 606 LNFALKEVLGNDVDQKGSLVAPEKLRFDFS-HKRALSYEELVEVEKLSNEKIRDNLTVYY 664
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
+ + ++ + + GE YPD V ++ I S++ S E C GTHV
Sbjct: 665 KEVALDLAKTISSVRAVFGETYPDPVRVVSIGKAVEEVLENPTSEEWQKYSIEFCGGTHV 724
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
T I+ ++ G+R I ++G
Sbjct: 725 AKTSDIKEFVIVEESGIAKGIRRIVAVSG 753
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPA----PYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM Q+K +FLG + P+ R NSQKCIR GGKHNDL GRD
Sbjct: 36 IPFDDPTLLFANAGMNQYKPIFLGTVDPSSDFYKLKRATNSQKCIRAGGKHNDLEDVGRD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK +P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAIEYSWELLTK-VYGIPGDRLYVTY 141
>gi|256272535|gb|EEU07514.1| Ala1p [Saccharomyces cerevisiae JAY291]
Length = 958
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 269/818 (32%), Positives = 400/818 (48%), Gaps = 100/818 (12%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++R++FLDYF + + H VKSSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQKWTATNVRNTFLDYFKSKE-HKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
PA R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 62 DPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ LT+ +P DRLY TYF G ++ GL D E R++W +GVP DHI K NFW
Sbjct: 122 SWTLLTEV-YGIPKDRLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D D++E+WN+VFI R ++ PL
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F PL E I++++ +PY F +++ +DT+Y
Sbjct: 240 KHIDTGMGFERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R +T ALAD P+ + LR ++R + G L+ +
Sbjct: 300 RVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ D++PE+ + IL EE F KT E+
Sbjct: 360 SQVQDIFPELAKDPAFLFEILDEEEASF--------------AKTLDRGER--------- 396
Query: 418 VLGVKYLTKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
L ++ A S TE + G + LYDTYG ++ + +A + L + FE+
Sbjct: 397 ------LFEKYASAASKTESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEK 450
Query: 475 KLNELKERSKAKAASNVPDI---------DLMDLKHFPVTDDKYKYDYHYDTNSKRYTFP 525
E E SK + D+ +L D K P T+D++KY
Sbjct: 451 AKQESYEASKRGGKKDQSDLIKLNVHELSELNDAK-VPKTNDEFKYG------------- 496
Query: 526 CLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQI 585
N+ G ++ G + E G+I DKT YA GGQ
Sbjct: 497 --SANVEGTIL-------------KLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQE 541
Query: 586 DDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
D G + + + N VE +L + G + H G++ K++ G D R
Sbjct: 542 YDTGKIVIDDAAEFN--VENVQLYN--GFVFHTGSLEEG-KLSVGDKIIASFDELRRFPI 596
Query: 646 MRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
HT +H+LN AL+ L QK V ++ DFS + + +S + + VE N+
Sbjct: 597 KNNHTGTHILNFALKETLGNDVDQKGSLVAPEKLRFDFS-HKKAVSNEELKKVEDICNEQ 655
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVIS 752
I +QV + + + + + GE YPD V ++ + +++ S
Sbjct: 656 IKENLQVFYKEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYS 715
Query: 753 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
E C GTHV TG I+ ++ G+R I +TG
Sbjct: 716 IEFCGGTHVNKTGDIKYFVILEESGIAKGIRRIVAVTG 753
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + PA R NSQKCIR GGKHNDL G+D
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFLGTVDPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + LT+ +P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAITYSWTLLTE-VYGIPKDRLYVTY 141
>gi|151945412|gb|EDN63655.1| alanyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
Length = 958
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 269/818 (32%), Positives = 399/818 (48%), Gaps = 100/818 (12%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++R++FLDYF + + H VKSSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQKWTATNVRNTFLDYFKSKE-HKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
PA R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 62 DPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ LT+ +P DRLY TYF G + GL D E R++W +GVP DHI K NFW
Sbjct: 122 SWTLLTEV-YGIPKDRLYVTYFEGDENLGLEPDTEARELWKNVGVPDDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D D++E+WN+VFI R ++ PL
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F PL E I++++ +PY F +++ +DT+Y
Sbjct: 240 KHIDTGMGFERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R +T ALAD P+ + LR ++R + G L+ +
Sbjct: 300 RVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ D++PE+ + IL EE F KT E+
Sbjct: 360 SQVQDIFPELAKDPAFLFEILDEEEASF--------------AKTLDRGER--------- 396
Query: 418 VLGVKYLTKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
L ++ A S TE + G + LYDTYG ++ + +A + L + FE+
Sbjct: 397 ------LFEKYASAASKTESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEK 450
Query: 475 KLNELKERSKAKAASNVPDI---------DLMDLKHFPVTDDKYKYDYHYDTNSKRYTFP 525
E E SK + D+ +L D K P T+D++KY
Sbjct: 451 AKQESYEASKRGGKKDQSDLIKLNVHELSELNDAK-VPKTNDEFKYG------------- 496
Query: 526 CLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQI 585
N+ G ++ G + E G+I DKT YA GGQ
Sbjct: 497 --SANVEGTIL-------------KLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQE 541
Query: 586 DDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
D G + + + N VE +L + G + H G++ K++ G D R
Sbjct: 542 YDTGKIVIDDAAEFN--VENVQLYN--GFVFHTGSLEEG-KLSVGDKIIASFDELRRFPI 596
Query: 646 MRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
HT +H+LN AL+ L QK V ++ DFS + + +S + + VE N+
Sbjct: 597 KNNHTGTHILNFALKETLGNDVDQKGSLVAPEKLRFDFS-HKKAVSNEELKKVEDICNEQ 655
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVIS 752
I +QV + + + + + GE YPD V ++ + +++ S
Sbjct: 656 IKENLQVFYKEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYS 715
Query: 753 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
E C GTHV TG I+ ++ G+R I +TG
Sbjct: 716 IEFCGGTHVNKTGDIKYFVILEESGIAKGIRRIVAVTG 753
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + PA R NSQKCIR GGKHNDL G+D
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFLGTVDPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + LT+ +P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAITYSWTLLTE-VYGIPKDRLYVTY 141
>gi|440635965|gb|ELR05884.1| alanyl-tRNA synthetase [Geomyces destructans 20631-21]
Length = 1016
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 267/839 (31%), Positives = 414/839 (49%), Gaps = 106/839 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPA-----PYPR 71
+R +FL+YF + Q H +V S+ +VP+ D ++ F N+GM QFK +FLG A R
Sbjct: 72 VRKTFLEYFADRQ-HEIVSSASVVPHNDATLLFANAGMNQFKPIFLGTVGATEAFASMKR 130
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
++QKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++ + E LTK
Sbjct: 131 AVDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKETIEFSWELLTKV-FK 189
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYF G GL D E +++W+ +GV DHI +K NFWEMG TGPCG
Sbjct: 190 LDPDRLYVTYFEGDKDLGLEADLEAKELWMAVGVSEDHILPGDIKDNFWEMGETGPCGPC 249
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIH+D G ++A + VN D +++EIWN VF+ R ++ L +IDTG+GFER
Sbjct: 250 SEIHFDRIGGRNAA-SLVNQDDPNVLEIWNNVFMQFDRQKDRSLKVLPARHIDTGMGFER 308
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV+ILQ+KTS Y TD+F PL I++V+ A+PY + + +DT+YR+++D+ R++T
Sbjct: 309 LVSILQDKTSNYATDVFTPLFAKIQEVTQARPYTDKYGKDDADGIDTAYRVIADHVRLLT 368
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A++D P+ + +R V+R + F G + + E +G+ +PEI
Sbjct: 369 FAISDGAVPNNEGRGYVVRRVLRRGSRYARKYFNADIGNFFSRILPALVEQMGEQFPEIV 428
Query: 369 DSINKIQLILGEE----SRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
+++ IL EE +R DN K M E +K
Sbjct: 429 RMQSEVAEILDEEEAQFARTLDNGEK---------------------MFERFATRAIKSG 467
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
T +L +GD + LYDTYG +++ + +A + + E E + +E SK
Sbjct: 468 TNRL---------TGDEVWRLYDTYGFPEDLTKIMADERNIGYNDEEIEIARLKAREASK 518
Query: 485 -------AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLD-TNLVGIVI 536
A A +V I ++ P T D KY + T ++ + D ++
Sbjct: 519 STKEGVIAFAKLDVHQIAELNKSEIPPTIDDAKYTGNVTTGKVKFIYDGKDFLKSTKELV 578
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
Q F GL+ D+TN YA +GGQ+ D+G +
Sbjct: 579 AGQNF---------------------------GLMLDRTNFYAESGGQVADVGRIGIDG- 610
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+ ++ ++ + G I+H G + +++ +E D R HT +H+LN
Sbjct: 611 ---GAEFKVVDVQAYGGYILHNG-FLEQGQLSADDEVTLEYDEIRRQPIRNNHTGTHILN 666
Query: 657 AALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
+LR VL +QK V +++ DFS + L++ + +E + N I ++ +
Sbjct: 667 HSLREVLGDEVHQKGSLVDAEKLRFDFSNKVQ-LTLPELQKIEDFSNSYIRQNCKIYSKD 725
Query: 716 MRASELPFLTHLTVIPGEIYPD-----------DVILIDISDKE-NVISREPCCGTHVFN 763
++ E + L + GE YP+ D +L D ++E +S E C GTHV
Sbjct: 726 VQLEEAQGIVGLRAVFGETYPNPVRVVSVGVDVDTLLADPKNEEWRKVSVEFCGGTHVDQ 785
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILN-VGNIPYG 821
TG I+ ++ G+R I TG +++ L+ A FSQ L+ + +PYG
Sbjct: 786 TGEIKDLIIVEESGIAKGIRRIIAYTGQAARQV-----QLA-AKDFSQRLDALEALPYG 838
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPA-----PYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG A R ++QKCIR GGKHNDL G+D
Sbjct: 94 VPHNDATLLFANAGMNQFKPIFLGTVGATEAFASMKRAVDTQKCIRAGGKHNDLDDVGKD 153
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++ + E LTK L DRLY T+
Sbjct: 154 SYHHTFFEMLGNWSFGDYFKKETIEFSWELLTK-VFKLDPDRLYVTY 199
>gi|313104284|sp|P40825.3|SYA_YEAST RecName: Full=Alanine--tRNA ligase, mitochondrial; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS; Flags:
Precursor
Length = 983
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 267/817 (32%), Positives = 399/817 (48%), Gaps = 98/817 (11%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++R++FLDYF ++ H VKSSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 28 IGDKQKWTATNVRNTFLDYF-KSKEHKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTV 86
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
PA R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 87 DPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITY 146
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ LT+ +P DRLY TYF G ++ GL D E R++W +GVP DHI K NFW
Sbjct: 147 SWTLLTEV-YGIPKDRLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFW 205
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D D++E+WN+VFI R ++ PL
Sbjct: 206 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPA 264
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F PL E I++++ +PY F +++ +DT+Y
Sbjct: 265 KHIDTGMGFERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAY 324
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R +T ALAD P+ + LR ++R + G L+ +
Sbjct: 325 RVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLI 384
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ D++PE+ + IL EE F KT E+
Sbjct: 385 SQVQDIFPELAKDPAFLFEILDEEEASF--------------AKTLDRGER--------- 421
Query: 418 VLGVKYLTKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
L ++ A S TE + G + LYDTYG ++ + +A + L + FE+
Sbjct: 422 ------LFEKYASAASKTESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEK 475
Query: 475 KLNELKERSKAKAAS--------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPC 526
E E SK NV ++ ++ P T+D++KY
Sbjct: 476 AKQESYEASKRGGKKDQSDLIKLNVHELSELNDAKVPKTNDEFKYG-------------- 521
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
N+ G ++ G + E G+I DKT YA GGQ
Sbjct: 522 -SANVEGTIL-------------KLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEY 567
Query: 587 DIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCM 646
D G + + + N VE +L + G + H G++ K++ G D R
Sbjct: 568 DTGKIVIDDAAEFN--VENVQLYN--GFVFHTGSLEEG-KLSVGDKIIASFDELRRFPIK 622
Query: 647 RAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI 705
HT +H+LN AL+ L QK V ++ DFS + + +S + + VE N+ I
Sbjct: 623 NNHTGTHILNFALKETLGNDVDQKGSLVAPEKLRFDFS-HKKAVSNEELKKVEDICNEQI 681
Query: 706 ANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISR 753
+QV + + + + + GE YPD V ++ + +++ S
Sbjct: 682 KENLQVFYKEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYSI 741
Query: 754 EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
E C GTHV TG I+ ++ G+R I +TG
Sbjct: 742 EFCGGTHVNKTGDIKYFVILEESGIAKGIRRIVAVTG 778
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + PA R NSQKCIR GGKHNDL G+D
Sbjct: 61 VPFDDPTLLFANAGMNQYKPIFLGTVDPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKD 120
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + LT+ +P DRLY T+
Sbjct: 121 SYHHTFFEMLGNWSFGDYFKKEAITYSWTLLTE-VYGIPKDRLYVTY 166
>gi|406865414|gb|EKD18456.1| tRNA synthetase class II [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 949
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 265/827 (32%), Positives = 400/827 (48%), Gaps = 92/827 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R +FL++F +GHT+V SS +VP+ D ++ F N+GM QFK +FLG A R
Sbjct: 11 VRKTFLEFF-EAKGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTVGQTDDLAQLKR 69
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
++QKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A M+ E LTK
Sbjct: 70 AVDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKQEAIEMSWELLTKV-YG 128
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYF G + G+ D E +D+W ++GV DHI MK NFWEMG GPCG
Sbjct: 129 LDPDRLYVTYFEGDESAGVEPDLEAKDLWKKVGVADDHILPGNMKDNFWEMGDQGPCGPC 188
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SE+HYD G +A VN D +++EIWN VFI R ++ L ++DTG+G+ER
Sbjct: 189 SEVHYDRIGGGRNAAHLVNMDDPNVLEIWNNVFIQFDRQKDRSLKTLPAKHVDTGMGYER 248
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV++LQ+K+S YDTD+FLPL I++V+ A+ Y + + +DT+YR+++D+ R++
Sbjct: 249 LVSVLQDKSSNYDTDVFLPLFTKIQEVTKARQYTDKYGKDDVDGIDTAYRVIADHIRLLA 308
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A++D P + +R V+R +E F + G ++ + E +G+ +PEI
Sbjct: 309 FAISDGGVPSNVGRGYVVRRVLRRGARYAESYFNAEIGSFFSKILPALVEQMGEQFPEIV 368
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+++ IL EE F K GLV+ KY +
Sbjct: 369 AKQQEVKEILDEEEEAFGRTLKR------------------------GLVMFEKYAAHAI 404
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKL-------TLCHEAFEQKLNELKE 481
D ++SGD + LYDT+G +++ + LA K L + E +K+
Sbjct: 405 KNDSK--KLSGDDVWRLYDTFGFPEDLTKILAEEKGLETDDAEIEIAKERARLASMVVKD 462
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
S+ A +V I +D P +D K+ D+ +K V +V + F
Sbjct: 463 TSQTFAKFDVHQIAELDKMGIPRPNDDAKFS-KGDSTAK-----------VSLVYDGKAF 510
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
LE G++ DKTN YA GGQ+ D G + +
Sbjct: 511 LKSTEG--------------LEPGKPFGVLLDKTNFYAEQGGQVADTGKIIIDGVAE--- 553
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
++ ++ + G IVH G + + G E D R HT +H+LN ALR
Sbjct: 554 -FKVRDVQTYGGYIVHNG-YLDYGSLKAGDEVICEYDELRRQPIRNNHTGTHILNHALRE 611
Query: 662 VLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
L QK V D+ DFS + +S+ + +E N I ++ + +
Sbjct: 612 HLGEDINQKGSLVDQDKLRFDFS-HKAQVSLPELKKIEDSSNAYIKQNCEIYAKDVDLDL 670
Query: 721 LPFLTHLTVIPGEIYP------------DDVILIDISDKENVISREPCCGTHVFNTGHIE 768
+ + + GE YP D+++ + K +S E C GTHV TG I+
Sbjct: 671 AKGIEGVRAVFGETYPNPVRVVSVGVPVDELLENPKNPKWREVSVEFCGGTHVEKTGLIK 730
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSKA----AVENGKHLSTAASFSQ 811
++ G+R I TGD+++ A+E GK + S
Sbjct: 731 DLVIVEESGIAKGIRRIIAYTGDAAQKVQRDAIEFGKRIEALEKMSH 777
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG A R ++QKCIR GGKHNDL G+D
Sbjct: 33 VPHNDPTLLFTNAGMNQFKPIFLGTVGQTDDLAQLKRAVDTQKCIRAGGKHNDLDDVGKD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A M+ E LTK L DRLY T+
Sbjct: 93 SYHHTFFEMLGNWSFGDYFKQEAIEMSWELLTK-VYGLDPDRLYVTY 138
>gi|402224402|gb|EJU04465.1| hypothetical protein DACRYDRAFT_20988 [Dacryopinax sp. DJM-731 SS1]
Length = 960
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 268/823 (32%), Positives = 397/823 (48%), Gaps = 97/823 (11%)
Query: 4 PNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG 63
P Y + +R +F+DYF +GHT SS +PY D ++ F N+GM Q+K +FLG
Sbjct: 6 PFGGPYGHWPADKVRQTFIDYF-KARGHTFWPSSSTIPYEDPTLLFANAGMNQYKAIFLG 64
Query: 64 LTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDAC 118
A R NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A
Sbjct: 65 TVDPQSELAKLKRAVNSQKCIRAGGKHNDLEDVGKDTYHHTFFEMLGNWSFGDYFKKEAI 124
Query: 119 RMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCN 178
+ + E LT+ LP DRLY TYF G + GL D E R WL++GVP DHI K N
Sbjct: 125 QWSWELLTEV-YKLPKDRLYVTYFEGDSKQGLDADLEARQYWLDVGVPEDHILTGDAKDN 183
Query: 179 FWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
FWEMG+TGPCG SEIH+D G ++A VN D ++IEIWN VFI R ++ L
Sbjct: 184 FWEMGATGPCGPCSEIHFDRLGGRNAAHL-VNQDDPNVIEIWNNVFIQFNREEDGSLREL 242
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
++DTG+GFERLV+ LQ+ S YDTD+F+P+ I++++GA+ Y + +DT
Sbjct: 243 PAKHVDTGMGFERLVSCLQDLPSNYDTDVFVPIFAKIQELTGARRYAGKLGAEDVDGIDT 302
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYN 355
+YR+++D+ R +T AL+D P+ + LR ++R F V G L+
Sbjct: 303 AYRVVADHVRTLTFALSDGGVPNNVGRGYVLRRILRRGARYVRKKFGVPIGSFFSSLAPT 362
Query: 356 IAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
+ + +G +PEI ++ I+ IL EE E F+ +
Sbjct: 363 VIQQMGHFFPEITRKLSDIKEILDEEE------------------------ESFSRTLDR 398
Query: 416 GLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQK 475
G L +Y+T + S + G + LYDTYG ++ + +A LT+ FE+
Sbjct: 399 GEKLFEEYVTATKKKGSS--SLHGHDVWRLYDTYGFPVDLTRLMAEELHLTINEHEFEEA 456
Query: 476 LNELKERSKA---KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPC 526
E SKA K + +D+ DL P TDD+ K+
Sbjct: 457 RLRSLEASKASQKKGNEDAVKLDVHDLAALESNPKVPKTDDRPKF--------------- 501
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L I Q +K + + + +A G++ D+T+ YA +GGQ +
Sbjct: 502 ---GLGNISATIQAIYFNKSFLE--------STTAIPEDAAFGILLDRTSFYAESGGQEN 550
Query: 587 DIGVAYLTNTTQENGKVE--IGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRL 643
D G + +GK E + + G ++H G + F V + S D R
Sbjct: 551 DTGSIII------DGKTEFMVQNVQVYNGYVLHSGALKYGQFSVGDEVIS--SYDELRRW 602
Query: 644 GCMRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN 702
HT +H+LN ALR +L QK V + DFS + ++++ + +E+ N
Sbjct: 603 PLRNNHTGTHILNFALREILGDHIDQKGSLVAPTKLRFDFS-HKAQVTLEEMEKIEEICN 661
Query: 703 DVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILID--------ISDKENVISR- 753
I V+V + + + + GE YPD V ++ I D +N R
Sbjct: 662 GWIKRDVKVFSQEVDLHTAQEFAGVRAVFGEAYPDPVRVVSLGYEVQDIIQDPQNPKWRG 721
Query: 754 ---EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
E C GTHV TG I++ + G+R I +TG+ +
Sbjct: 722 TSIEFCGGTHVAKTGDIKALVLTEESGIAKGIRRIIAVTGEEA 764
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM Q+K +FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 41 IPYEDPTLLFANAGMNQYKAIFLGTVDPQSELAKLKRAVNSQKCIRAGGKHNDLEDVGKD 100
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A + + E LT+ LP DRLY T+
Sbjct: 101 TYHHTFFEMLGNWSFGDYFKKEAIQWSWELLTE-VYKLPKDRLYVTY 146
>gi|452842093|gb|EME44029.1| hypothetical protein DOTSEDRAFT_44310 [Dothistroma septosporum
NZE10]
Length = 960
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 259/811 (31%), Positives = 395/811 (48%), Gaps = 92/811 (11%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
++ +RS+F+DYF GHT V SS +VP D ++ F N+GM Q+K++FLG A
Sbjct: 12 TAQKVRSTFIDYF-KQHGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDFA 70
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
R AN+QKC+R GGKHNDL G+DSYHHTFFEM+GNWSF DY+K++A + E LTK
Sbjct: 71 KLKRAANTQKCIRAGGKHNDLDDVGKDSYHHTFFEMMGNWSFGDYFKKEAINFSWELLTK 130
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
L +RLY TYF G GL D E RD+W +GV DHI MK NFWEMG GP
Sbjct: 131 V-YGLDPNRLYVTYFEGKTDVGLEPDNEARDLWKSVGVADDHILTGDMKDNFWEMGDQGP 189
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIHYD G ++A VN D +++EIWN VFI + R ++ L ++DTG+
Sbjct: 190 CGPCSEIHYDRIGGRNAAHL-VNQDDPNVLEIWNNVFIQYNREPDRSLKSLPAKHVDTGM 248
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G+ERLV++LQNK S YDTD+F PL I++V+G + Y F + +DT+YR+++D+
Sbjct: 249 GYERLVSVLQNKMSNYDTDVFSPLFARIQEVTGVREYQGKFGEDDADGIDTAYRVVADHV 308
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R++T A++D P + +R V+R + F V+ G ++ + E +GD++
Sbjct: 309 RLLTFAISDGAPPSNVGRGYVVRRVLRRGARYARKYFNVEIGSFFSKIVPTLVEQVGDMF 368
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI+ ++ L EE F K L + + E++
Sbjct: 369 PEIKKKQAEVTETLDEEEVSF----------AKTLDRGEAMFEKY--------------- 403
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
Q ++ +I+G F LYDTYG ++ + +A + L + EA + + ++ SK
Sbjct: 404 -AQASKTKGSKDIAGADVFRLYDTYGFPVDLTKLMAEERGLDIDEEAVAEAEKKHQKASK 462
Query: 485 A--KAASNVPDIDLMDLKHF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
K ++ P + + D+ P T+D K+ N+ +
Sbjct: 463 GAKKEGADYPKLTVHDINALENMPDVPKTNDDAKF---------------AKGNISATI- 506
Query: 537 GDQVFCIDKHAIRHARSGASIDSI-QLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
AI H G + S ++ G++ DKTN YA GGQ +D G +
Sbjct: 507 ---------KAIYH--KGNFLQSTKEVPEGEQFGVVLDKTNFYAEQGGQENDAGSLLIDG 555
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+ +++ + S G ++H G + + G + R HT +H+L
Sbjct: 556 EAE----IDVQNVQSYAGFVLHTGYMKEGV-LNVGSEVLCQYSEERRQPIRNNHTGTHIL 610
Query: 656 NAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
N ALR VL QK V ++ DFS + S ++ +E+ I +V +
Sbjct: 611 NFALREVLGDDINQKGSLVAPEKLRFDFS-HKSGCSDAEISQIEEKSTSYIRQNSEVYSK 669
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDIS------------DKENVISREPCCGTHVF 762
+ + + + + GE YPD V ++ I +S E C GTHV
Sbjct: 670 EVPLATARQIEGVRAVFGETYPDPVRVVSIGVPVEDLLEDPPRKDWRSVSVEFCGGTHVK 729
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
NT I+ V+ G+R I +TG ++
Sbjct: 730 NTSEIKDLIVVEESGIAKGIRRIIAVTGRTA 760
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R AN+QKCIR GGKHNDL G+D
Sbjct: 38 VPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDFAKLKRAANTQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEM+GNWSF DY+K++A + E LTK L +RLY T+
Sbjct: 98 SYHHTFFEMMGNWSFGDYFKKEAINFSWELLTK-VYGLDPNRLYVTY 143
>gi|365987223|ref|XP_003670443.1| hypothetical protein NDAI_0E03830 [Naumovozyma dairenensis CBS 421]
gi|343769213|emb|CCD25200.1| hypothetical protein NDAI_0E03830 [Naumovozyma dairenensis CBS 421]
Length = 956
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 277/837 (33%), Positives = 405/837 (48%), Gaps = 102/837 (12%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + +R++FLDYF ++ H + SSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQKWTAVQVRNTFLDYF-KSKNHKFIPSSPVVPFDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
P+ R NSQKCVR GGKHNDL G+DSYHHTFFEMLGNWSF DY+K +A
Sbjct: 62 DPSSDFYTLKRAYNSQKCVRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKTEAINY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
A + LT +P DRLY TYF G + GL D E +++W ++GVP DHI K NFW
Sbjct: 122 AWDLLTNV-YGIPKDRLYVTYFEGDAKQGLEPDTEAQELWKKVGVPEDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A VN D D++E+WN+VFI R S + L
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNAA-QLVNQDDPDVLEVWNLVFIQFNRESNGELKSLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F PL + I++++GA+ Y F ++ ++DT+Y
Sbjct: 240 KHIDTGMGFERLVSVLQDVRSNYDTDVFQPLFKRIQEITGARDYTGKFGDEDKDNIDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R + ALAD P+ + LR ++R + G L+ +
Sbjct: 300 RVLADHVRTLMFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ + ++PEI + + IL EE F KT E+
Sbjct: 360 DQVKHIFPEIAKDPSFLFEILDEEEASF--------------AKTLDRGER--------- 396
Query: 418 VLGVKYLTKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
L ++ A S TE + G + LYDTYG ++ + +A + L + FE+
Sbjct: 397 ------LFEKYAAAASQTESKTLDGKQVWRLYDTYGFPVDLTELMAEEQNLKIDGPGFEK 450
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHF--------PVTDDKYKYDYHYDTNSKRYTFPC 526
E E SK + D+ +D+ P TDD KY
Sbjct: 451 AKQESYEASKRGGKKDNGDLIKLDVHQLSELNDNNVPKTDDNAKYGTE------------ 498
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
I+ +R +DSI E G+I DKT YA GGQ
Sbjct: 499 ---------------NIESTILRIHDGTNFVDSI-TEVGKKYGIILDKTCFYAEQGGQEY 542
Query: 587 DIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCM 646
D G + + + N VE +L + G + H G++ K++ G D R
Sbjct: 543 DTGKIVIDDAAEFN--VENVQLYN--GFVFHTGSLEEG-KLSVGDKIIASYDELRRFPIK 597
Query: 647 RAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI 705
HT +H+LN AL+ L QK V ++ DFS + + L+ D + VE N+ I
Sbjct: 598 NNHTGTHILNLALKETLGADVDQKGSLVNPEKLRFDFS-HKKALTTDELRKVEDISNEQI 656
Query: 706 ANQVQVDRRHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISDKE-NVISR 753
+ V + + + + ++ + GE YPD D +L D +++E N S
Sbjct: 657 KENLIVYYKDVPLEQAKSINNVRAVFGETYPDPVRVVCVGKPIDELLADPTNEEWNKYSI 716
Query: 754 EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG----DSSKAAVENGKHLSTA 806
E C GTHV TG I+ V+ G+R I +TG ++ + A E L TA
Sbjct: 717 EFCGGTHVAKTGDIKYFVVLEESGIAKGIRRIVAVTGSEAFEAQRIANEFASELETA 773
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + P+ R NSQKC+R GGKHNDL G+D
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFLGTVDPSSDFYTLKRAYNSQKCVRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K +A A + LT +P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKTEAINYAWDLLTN-VYGIPKDRLYVTY 141
>gi|342181320|emb|CCC90799.1| putative alanyl-tRNA synthetase [Trypanosoma congolense IL3000]
Length = 1004
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 285/871 (32%), Positives = 421/871 (48%), Gaps = 126/871 (14%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAP------YP 70
+R F+D+F +GHT V S ++P+ D ++ F N+GM QFKN+FLG T P
Sbjct: 44 VRQEFVDFF-ERRGHTFVPSGAVIPHDDPTLLFTNAGMNQFKNLFLG-TADPNTDFGRLT 101
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R NSQ C+R GGKHNDL GRD+YHHTFFEMLG+WSF Y+KR+A + E LT+
Sbjct: 102 RAVNSQMCIRAGGKHNDLDDVGRDTYHHTFFEMLGSWSFGSYFKREAILWSWELLTEV-Y 160
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP DRLY TYF G G+ DEE++ +WLEL VP DH+ K NFWEMG GPCG
Sbjct: 161 KLPKDRLYVTYFEGDPVTGIAPDEESKRLWLEL-VPEDHVIPGNAKDNFWEMGDVGPCGP 219
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIH+D G ++A VN D +IE+WN+VF+ +R +VPL K ++DTG+G E
Sbjct: 220 CSEIHFDRIGNRNAA-ELVNKDDPMVIEVWNLVFMQFERREGGVMVPLPKMHVDTGMGLE 278
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSG-AKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
RL +ILQ S YDTD ++PL + I+KV+G K Y T D +YR ++D+ R
Sbjct: 279 RLASILQGVHSNYDTDAWMPLFDAIQKVTGFDKSYAEIRDTC--CDATVAYRAVADHIRC 336
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
+TVALAD PD + LR ++R A+ K G +L ++ LGD +
Sbjct: 337 LTVALADGAMPDCVGRGFVLRRIIRRAVRYGVQFLGAKTG-FFHKLVDSVVASLGDFFKH 395
Query: 367 IQD--SINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
+Q+ ++ +I+ +L +E F + W+ G+K+
Sbjct: 396 LQEPRTVQRIKGVLADEEASF-------ARTWE---------------------TGLKHF 427
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
K +A + ISG+ AF L+D YG ++ LA + + + F + + S
Sbjct: 428 NKAVA-EAVGNIISGENAFVLHDRYGFPVDLTSLLAEKANMKVDLDGFHATMKASQLSSG 486
Query: 485 AKAAS----NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
AA+ +V ++ + TDD KY + +
Sbjct: 487 RVAAAKTFLDVHQVEQLKAMGIAPTDDASKYVWKSRVAEVK------------------- 527
Query: 541 FCIDKHAIRHARSGASIDSIQLE---HNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
AI RSGA ++ + + ++ +G+I D TN YA AGGQI D G +
Sbjct: 528 ------AIFDRRSGAFVEMLLPDPDVNSEDIGIILDATNFYAEAGGQIYDTGRIF----A 577
Query: 598 QENGKVEIGELASLEGKIVHFGNVVS--------SFKVTPGLTSRVE--VDARMRLGCMR 647
+ ++ ++ ++ G IVH G++ + V +T+ VE VD RL
Sbjct: 578 APDAIFDVQKVYNIGGYIVHVGSMRAPCGNEGDVGVPVPIPVTAAVELQVDYDRRLPIAA 637
Query: 648 AHTTSHLLNAALRRVL--------TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
HT++HLLN LRRVL +QK V ++ DFS Y + + VEK
Sbjct: 638 NHTSTHLLNWCLRRVLEEEAPNNFVEVHQKGSLVNAEMLRFDFS-YNSKVGHSDLIKVEK 696
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS--------DKEN-- 749
N+++ ++ V R+ + + L + GE YPD V +I I D EN
Sbjct: 697 IFNELVQKEMNVYRKEVTLDTARRIVGLRQMFGEKYPDPVSVISIGVPVEQLIEDPENEQ 756
Query: 750 --VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST-- 805
S E C GTH+ NT ++ ++ S G+R I T D++ A + G L
Sbjct: 757 WRAYSTEFCGGTHLSNTRDVQMGVILSEDSLMKGIRRIVFATRDAASRAQKEGNALQQEY 816
Query: 806 --------AASFSQILNVGNIPYGDDSIAFV 828
+ S+ L+V N GD +I +
Sbjct: 817 HEIISRPPSDMVSKSLSVLNKKVGDSAIPLL 847
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 72/108 (66%), Gaps = 8/108 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAP------YPRVANSQKCIRVGGKHNDLSFAGR 871
IP+ D ++ F N+GM QFKN+FLG T P R NSQ CIR GGKHNDL GR
Sbjct: 66 IPHDDPTLLFTNAGMNQFKNLFLG-TADPNTDFGRLTRAVNSQMCIRAGGKHNDLDDVGR 124
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
D+YHHTFFEMLG+WSF Y+KR+A + E LT+ LP DRLY T+
Sbjct: 125 DTYHHTFFEMLGSWSFGSYFKREAILWSWELLTE-VYKLPKDRLYVTY 171
>gi|328874134|gb|EGG22500.1| alanyl-tRNA synthetase [Dictyostelium fasciculatum]
Length = 961
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 252/817 (30%), Positives = 402/817 (49%), Gaps = 82/817 (10%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLT-----PAPYPR 71
IR +F+D+F HT V SS ++P+ D ++ F N+GM QFK +FLG A R
Sbjct: 7 IRKTFIDFFSEKCQHTFVPSSSVIPHDDPTLLFANAGMNQFKPIFLGQADPRSEQAKLKR 66
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A A E LT V
Sbjct: 67 AVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLT---VV 123
Query: 132 LPLD--RLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
LD RLY +YFGG GL D E RD+WL+ +P + + GMK NFWEMG TGPCG
Sbjct: 124 YKLDKERLYASYFGGDAAKGLEADTEARDLWLQF-LPAERVLPFGMKENFWEMGDTGPCG 182
Query: 190 YSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
SEIH+D A A VNAD LIEIWN VFI + R + ++ PL ++DTG+G
Sbjct: 183 PCSEIHFDKVEGRKGAAALVNADDPTLIEIWNNVFIQYNREADKSLRPLPNKHVDTGMGL 242
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSG-AKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
ERL +I+QN + YDTD+F+P+ I+KV+G PYG + + +D +YR+++D+ R
Sbjct: 243 ERLTSIIQNVGTNYDTDIFMPIFAEIQKVTGYPHPYGGKVGSDDPEQVDMAYRVIADHIR 302
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
++ ++AD P + + LR ++R A+ + G K + + + GD +P
Sbjct: 303 TLSFSIADGAVPSSEGRGQVLRRILRRAVRYGKQKLNAPSGFFAKLVDI-VVQNFGDFFP 361
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E+++ I +L E ++F + E+ +V VK
Sbjct: 362 ELRNRPQHIVSVLEREEKMFARALDRGIVEFDRMVDK------------------VKQQG 403
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
++ A+ LY ++G ++ + + K L L + +++ +E ER +
Sbjct: 404 SKV--------FPASNAWYLYSSFGFPIDLTKLMVDEKGLELDMDGYQKLADEDAERGRL 455
Query: 486 KAASNVPDIDLMDLKHFPVT---DDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
+ S + M+++ P++ D K +S +Y ++T + I G +VF
Sbjct: 456 RQRSKKTE---MNMQAEPISILQGDGVK----PTIDSHKYEQKEIETVVKAIYDG-KVFV 507
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
S++S N G++ + TN Y GGQI DIG + + +
Sbjct: 508 ------------NSLESTDTTRNTVYGIVLESTNFYPEQGGQIYDIG--NINSVVDQTTI 553
Query: 603 VEIGELASLEGKIVHFGNVVS-SFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+ + G +VH G + + + + G + VD R M HT++H++N ALR
Sbjct: 554 FNVSDCKVFGGYVVHIGYITADAAAIKVGDKVELTVDYTRRSPIMSNHTSTHMINFALRN 613
Query: 662 VLTCTYQKSCRVFSD-ECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL ++ + D + DFS ++ + V++ +ND+IA ++ V + + +
Sbjct: 614 VLGDNVEQRGSLVDDSKLRFDFS-NDRGMTRQEIIKVDQIVNDLIAKELPVSCKEVDLAR 672
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFNTGHIE 768
+ L + GE+YPD V ++ + + + P C GTH+ N+ E
Sbjct: 673 AKTINGLRAVFGEVYPDPVRVVSVGKSVDELLANPTNPEWTQYSIEFCGGTHINNSKDAE 732
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST 805
+ ++ G+R + +TG + EN K L
Sbjct: 733 YFAITSEEALAAGIRRVVAVTGSDATVVFENNKKLQA 769
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 71/109 (65%), Gaps = 10/109 (9%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLT-----PAPYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 30 IPHDDPTLLFANAGMNQFKPIFLGQADPRSEQAKLKRAVNSQKCIRAGGKHNDLDDVGKD 89
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLD--RLYFTF 919
+YHHTFFEMLGNWSF DY+K++A A E LT V LD RLY ++
Sbjct: 90 TYHHTFFEMLGNWSFGDYFKKEAITWAWELLT---VVYKLDKERLYASY 135
>gi|224083946|ref|XP_002307181.1| predicted protein [Populus trichocarpa]
gi|222856630|gb|EEE94177.1| predicted protein [Populus trichocarpa]
Length = 973
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 264/816 (32%), Positives = 401/816 (49%), Gaps = 108/816 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R +F+ +F + H KSSP+VP D ++ F N+GM QFK +FLG + R
Sbjct: 69 VRDTFIKFF-EEKNHVDWKSSPVVPVNDPTLLFANAGMNQFKPIFLGTADPNTALSKLSR 127
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A A E LTK
Sbjct: 128 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEWAWELLTKV-YK 186
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DR+Y TYFGG ++ GL D E RDIWL+ +P + G K NFWEMG TGPCG
Sbjct: 187 LPADRIYATYFGGDEKAGLAPDNEARDIWLQF-LPPGRVLPFGCKDNFWEMGDTGPCGPC 245
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
+EIHYD G ++A+ VN D +EIWN+VFI R S ++ L ++DTG+GFER
Sbjct: 246 TEIHYDRVGNRNAAML-VNNDDPTCLEIWNLVFIQFNRESDGSLKSLPAKHVDTGMGFER 304
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
L ++LQNK S YDTD+F+P+ + I++ +GA+PY + +D +YR+++D+ R ++
Sbjct: 305 LTSVLQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDVDGVDMAYRVVADHIRTLS 364
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A+AD P + LR ++R A+ +V K ++G L + +++ DV+PE++
Sbjct: 365 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQEG-FFNGLVNVVVKVMSDVFPELK 423
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+ I+ + E F ++++K K E+E + + V V Y+ +
Sbjct: 424 RNEEHIRETIAAEEASFGKTLLKGIEKFK---KAAQEVEGKVLSGQARCVCLVGYIWLPI 480
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS----- 483
D + GL ++ E F ++E +ERS
Sbjct: 481 RFDS--------------EERGLRVDV--------------EGFNNAMDEARERSRNAQN 512
Query: 484 KAKAASNVPDIDLMDLKH---FPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
K + V D D H TDD +K+
Sbjct: 513 KQAGGAIVMDADATSALHKKGVSATDDSFKF----------------------------- 543
Query: 541 FCIDKH--AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
C + H I+ +G+ N VG++ + T+ YA GGQI D GV
Sbjct: 544 ICFEDHESVIKAIYNGSEFLESAAAANE-VGIVLESTSFYAEQGGQIFDTGV-----LEG 597
Query: 599 ENGKVEIGELASLEGKIVHFGN---VVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
G ++ + G IVH G+ V F V +T +V+ D R + HT +H+L
Sbjct: 598 PFGSFQVCNVQIFGGFIVHIGSLTGVSGRFSVGEKVTCKVDYDRRKLIA--PNHTCTHML 655
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
N ALR VL QK V ++ DFS +G+ + + + +E +N I +++ V +
Sbjct: 656 NFALREVLGNHVDQKGSIVLPEKLRFDFS-HGKPVDPELLRKIESIVNGQIKDELGVFAK 714
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDK--------EN----VISREPCCGTHVF 762
+E + L + GE+YPD V ++ I K EN IS E C GTH+
Sbjct: 715 EATLAEAKQINGLRAVFGEVYPDPVRVVSIGRKVEDLLANPENEEWLSISAELCGGTHIT 774
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
NT ++ ++ + G+R I +T D + A+E
Sbjct: 775 NTREAKAFALLSEEGIAKGIRRITAVTTDGAFKAME 810
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK +FLG + R N+QKCIR GGKHNDL G+D
Sbjct: 91 VPVNDPTLLFANAGMNQFKPIFLGTADPNTALSKLSRACNTQKCIRAGGKHNDLDDVGKD 150
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A A E LTK LP DR+Y T+
Sbjct: 151 TYHHTFFEMLGNWSFGDYFKKEAIEWAWELLTK-VYKLPADRIYATY 196
>gi|340053937|emb|CCC48230.1| putative alanyl-tRNA synthetase [Trypanosoma vivax Y486]
Length = 960
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 281/864 (32%), Positives = 421/864 (48%), Gaps = 116/864 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R F+ +F + HT V SS +VP+ D ++ F N+GM QFKN+FLG R
Sbjct: 8 VRQEFVTFF-EQRCHTFVPSSSVVPHDDPTLLFANAGMNQFKNIFLGAADPNTDFGRLTR 66
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQ C+R GGKHNDL GRD+YHHTFFEMLG+WSF DY+KR+A + A E LT+
Sbjct: 67 AVNSQMCIRAGGKHNDLDDVGRDTYHHTFFEMLGSWSFGDYFKREAIKWAWELLTEV-FK 125
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P ++LY TYF G G+ DEE +++WLEL +P +H+ K NFWEMG GPCG
Sbjct: 126 IPKEQLYVTYFEGDKLNGMEADEEAKEVWLEL-LPPNHVIPGNTKDNFWEMGDIGPCGPC 184
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIHYD G A A VN D +IE+WN+VF+ +R + +V L K ++DTG+G ER
Sbjct: 185 SEIHYDRIGN-RDASAFVNKDDPMVIEVWNLVFMQFERRTDGQMVKLPKAHVDTGMGLER 243
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
L +ILQ S YDTD + PL + I+KV+G + +R D +YR ++D+ R +T
Sbjct: 244 LTSILQGVHSNYDTDAWTPLFDAIQKVTGFDKSYTEIRSDDRCDATVAYRAVADHIRCLT 303
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
VALAD PD+ + LR ++R A+ K G +L + LG + +Q
Sbjct: 304 VALADGAMPDSVGRGFVLRRIIRRAVRYGVQFLGAKVG-FFSQLVDAVVASLGPFFKHLQ 362
Query: 369 D--SINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ ++++I+ ++ +E F K W+ G+K+ K
Sbjct: 363 EPRTVHRIKTVIADEEASF-------AKTWE---------------------TGLKHFNK 394
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE--QKLNELKERSK 484
+A + T ISG+ AF L+D YG ++ LA + + E F K ++L
Sbjct: 395 AVAEAVNST-ISGEHAFILHDRYGFPVDLTNLLAEKANMHVDMEGFHATMKASQLSAGRV 453
Query: 485 AKAASNVPDIDLMDLKHFPV--TDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
A A + + L +LK+ V TDD KY + T +
Sbjct: 454 AAAKTFIDVHQLEELKNNDVKPTDDSAKYVWKDCTAEVK--------------------- 492
Query: 543 IDKHAIRHARSGASIDSIQLEHNAW---VGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
AI + ++G D + + + +G++ D TN YA +GGQI D G+
Sbjct: 493 ----AILNKKTGEFTDMLLPDATSGPEDIGIVLDVTNFYAESGGQIYDTGLI----VAAP 544
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTP-----GLTSRVEVDARMRLGCMRAHTTSHL 654
+ E+ ++ ++ G +VH GN++ + P + + VD RL HT++HL
Sbjct: 545 DAVFEVRKVYNVGGFVVHVGNMLRNGYTAPTPIPVSCSVELRVDYERRLPIAANHTSTHL 604
Query: 655 LNAALRRVL--------TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIA 706
LN LRRVL QK V + DFS Y + + + VEK +N I
Sbjct: 605 LNWCLRRVLEEEAPGNFMEIQQKGSLVTDEMLRFDFS-YNNKVPQEDLIKVEKLLNQKIN 663
Query: 707 NQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILID--------ISDKEN----VISRE 754
+QV R+ + S + L + GE YPD V +I I+D E S E
Sbjct: 664 EGLQVYRKEVPLSLARRVKGLRQMFGEKYPDPVSVISLGAPVEELIADPEKEEWGSYSVE 723
Query: 755 PCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS---------- 804
C GTH+ N + +I +S GVR + +T D+++ A+ G+ L
Sbjct: 724 FCGGTHLSNLQDAQVAVIISEESLMKGVRRMVVMTRDAARKALFEGESLRKELQEILSLP 783
Query: 805 TAASFSQILNVGNIPYGDDSIAFV 828
T+ + + L+V N GD +I +
Sbjct: 784 TSDATVKRLSVLNKKVGDSAIPLI 807
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFKN+FLG R NSQ CIR GGKHNDL GRD
Sbjct: 30 VPHDDPTLLFANAGMNQFKNIFLGAADPNTDFGRLTRAVNSQMCIRAGGKHNDLDDVGRD 89
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLG+WSF DY+KR+A + A E LT+ +P ++LY T+
Sbjct: 90 TYHHTFFEMLGSWSFGDYFKREAIKWAWELLTE-VFKIPKEQLYVTY 135
>gi|609338|gb|AAC49007.1| cytoplasmic alanyl-tRNA synthetase [Saccharomyces cerevisiae]
gi|1097386|prf||2113423A Ala-tRNA synthetase
Length = 958
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 266/817 (32%), Positives = 398/817 (48%), Gaps = 98/817 (11%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++R++FLDYF + + H VKSSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQKWTATNVRNTFLDYFKSKE-HKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
PA R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 62 DPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ LT+ +P D LY TYF G ++ GL D E R++W +GVP DHI K NFW
Sbjct: 122 SWTLLTEV-YGIPKDSLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D D++E+WN+VFI R ++ PL
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F PL E I++++ +PY F +++ +DT+Y
Sbjct: 240 KHIDTGMGFERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R +T ALAD P+ + LR ++R + G L+ +
Sbjct: 300 RVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ D++PE+ + IL EE F KT E+
Sbjct: 360 SQVQDIFPELAKDPAFLFEILDEEEASF--------------AKTLDRGER--------- 396
Query: 418 VLGVKYLTKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
L ++ A S TE + G + LYDTYG ++ + +A + L + FE+
Sbjct: 397 ------LFEKYASAASKTESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEK 450
Query: 475 KLNELKERSKAKAAS--------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPC 526
E E SK NV ++ ++ P T+D++KY
Sbjct: 451 AKQESYEASKRGGKRTKSDLIKLNVHELSELNDAKVPKTNDEFKYG-------------- 496
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
N+ G ++ G + E G+I DKT YA GGQ
Sbjct: 497 -SANVEGTIL-------------KLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEY 542
Query: 587 DIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCM 646
D G + + + N VE +L + G + H G++ K++ G D R
Sbjct: 543 DTGKIVIDDAAEFN--VENVQLYN--GFVFHTGSLEEG-KLSVGDKIIASFDELRRFPIK 597
Query: 647 RAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI 705
HT +H+LN AL+ L QK V ++ DFS + + +S + + VE N+ I
Sbjct: 598 NNHTGTHILNFALKETLGNDVDQKGSLVAPEKLRFDFS-HKKAVSNEELKKVEDICNEQI 656
Query: 706 ANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISR 753
+QV + + + + + GE YPD V ++ + +++ S
Sbjct: 657 KENLQVFYKEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYSI 716
Query: 754 EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
E C GTHV TG I+ ++ G+R I +TG
Sbjct: 717 EFCGGTHVNKTGDIKYFVILEESGIAKGIRRIVAVTG 753
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + PA R NSQKCIR GGKHNDL G+D
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFLGTVDPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + LT+ +P D LY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAITYSWTLLTE-VYGIPKDSLYVTY 141
>gi|361125346|gb|EHK97392.1| putative Alanyl-tRNA synthetase [Glarea lozoyensis 74030]
Length = 971
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 272/848 (32%), Positives = 415/848 (48%), Gaps = 101/848 (11%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLT 65
+S + + +R +FLD+F +GHT+V SS +VP+ D ++ F N+GM QFK +FLG
Sbjct: 1 MSDPQKWTAPVVRKTFLDFF-EKKGHTVVPSSSVVPHSDPTLLFTNAGMNQFKPIFLGTV 59
Query: 66 P-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
A + R +SQKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K A M
Sbjct: 60 GKTDDMAQWKRAVDSQKCIRAGGKHNDLDDVGKDGYHHTFFEMLGNWSFGDYFKEGAIGM 119
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ E LTK + DRLY TYF G + GL D E +++W ++GV DHI MK NFW
Sbjct: 120 SWELLTKV-YGIDPDRLYVTYFEGDEASGLEPDLEAKELWKKVGVAEDHILPGNMKDNFW 178
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG TGPCG SE+HYD G +A VN D +++EIWN VFI + R ++ L
Sbjct: 179 EMGETGPCGPCSEVHYDRIGGGRNAAHLVNMDDPNVLEIWNNVFIQYDRQKDRSLKTLPA 238
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTGLG+ERLV++LQ+K S YDTD+F PL I++V+GA+ Y + + +DT+Y
Sbjct: 239 KHIDTGLGYERLVSVLQDKLSNYDTDVFSPLFAKIKEVTGARDYTDKYGKDDVDGIDTAY 298
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+++D+ R++T A++D P+ + +R V+R + F + G ++ +
Sbjct: 299 RVIADHIRLLTFAISDGGVPNNEGRGYVVRRVLRRGSRYARKYFNAEIGAFFSKILPALV 358
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
E +G+ +PEI + ++ IL EE F L++ M E
Sbjct: 359 EQMGEQFPEIVKKQDDVKEILDEEEEAFART-----------------LDRGEKMFEKYA 401
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKL-------TLCHE 470
+K TK+L SG + LYDT+G +++ + +A + L + E
Sbjct: 402 ASAIKSNTKKL---------SGADVWRLYDTFGFPEDLTKIMAEERGLETDDAEIKIAQE 452
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
+ +KE + A +V I +D + P DD+ K+ SK T T
Sbjct: 453 KAREASKHVKEAAHTFAKLDVHQIAELDKLNVPRPDDEAKF-------SKGDT-----TG 500
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
V ++ + F + ++ G++ DKTN YA GGQ+ D G
Sbjct: 501 KVQLIYDGENFLKTTEGLPAQKT--------------FGILLDKTNFYAEQGGQVYDTGK 546
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ + + ++ ++ + G IVH G + ++ G E D R HT
Sbjct: 547 MIIDDVAE----FKVLDVQAYGGYIVHNG-YLEYGQLKAGDEVICEYDELRRQPIRNNHT 601
Query: 651 TSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H+LN ALR L QK V D+ DFS + +S + +E N I
Sbjct: 602 GTHILNHALREHLGDDINQKGSLVDQDKLRFDFS-HKTQVSNAELKKIEDSSNSYIKQNC 660
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISDKE-NVISREPCC 757
+V + + + + + GE YP+ +V+L + + E +S E C
Sbjct: 661 RVYYQDVDLETAKGIEGVRAVFGETYPNPVRVVSVGVEVEVLLAEPRNPEWRKVSVEFCG 720
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHLSTAASFSQIL 813
GTHV TG I+ ++ G+R I TGD++ + A+E GK +ST
Sbjct: 721 GTHVEQTGLIKDLVIVEESGIAKGIRRIIAYTGDAAHEVQRLAIEFGKKIST-------- 772
Query: 814 NVGNIPYG 821
+ +PYG
Sbjct: 773 -LEQLPYG 779
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG A + R +SQKCIR GGKHNDL G+D
Sbjct: 34 VPHSDPTLLFTNAGMNQFKPIFLGTVGKTDDMAQWKRAVDSQKCIRAGGKHNDLDDVGKD 93
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K A M+ E LTK + DRLY T+
Sbjct: 94 GYHHTFFEMLGNWSFGDYFKEGAIGMSWELLTK-VYGIDPDRLYVTY 139
>gi|146086823|ref|XP_001465654.1| putative alanyl-tRNA synthetase [Leishmania infantum JPCM5]
gi|398015391|ref|XP_003860885.1| alanyl-tRNA synthetase, putative [Leishmania donovani]
gi|134069753|emb|CAM68079.1| putative alanyl-tRNA synthetase [Leishmania infantum JPCM5]
gi|322499108|emb|CBZ34180.1| alanyl-tRNA synthetase, putative [Leishmania donovani]
Length = 962
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 283/874 (32%), Positives = 418/874 (47%), Gaps = 119/874 (13%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPA 67
S+ +R F+DYF QGHT V SSP+ P+ D ++ F+N+GM QFK +FLG T
Sbjct: 2 SFTEWPVSRVRQEFVDYF-KKQGHTFVPSSPVCPHDDPTLLFINAGMNQFKALFLG-TAD 59
Query: 68 P------YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMA 121
P R ANSQ C+R GGKHNDL GRD+YHHTFFEMLG+WSF DY+K++A + A
Sbjct: 60 PNTDFGRLKRAANSQMCIRAGGKHNDLEDVGRDTYHHTFFEMLGSWSFGDYFKKEAIQWA 119
Query: 122 LEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWE 181
E LT+ LP D+LY TYF G + GL D E +++W + +P I K NFWE
Sbjct: 120 WELLTE-VYKLPKDQLYVTYFEGDENNGLDPDLEAKELWGQF-LPESQIVPGNAKDNFWE 177
Query: 182 MGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
MG TGPCG SE+H+D G ++A + VN D ++EIWN+VF+ +R + ++ PL +
Sbjct: 178 MGDTGPCGPCSEVHFDRIGGRNAA-SLVNKDDPMVVEIWNLVFMQFERRAGGSLTPLPQK 236
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
+IDTG+G ERL +ILQ S YDTD ++PL E I+ +G +D +YR
Sbjct: 237 HIDTGMGLERLTSILQGVKSNYDTDAWIPLFEAIQTATGYPKSYAEIRNDPDSDALVAYR 296
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAE 358
+++D+ R +T A+ D + PD+ + LR ++R A+ K G +L ++
Sbjct: 297 VVADHIRCLTSAVGDGVMPDSVGRGFVLRRIIRRAVRYGVQFLGAKPG-FFTQLVDSVCT 355
Query: 359 ILGDVYPEIQD--SINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
LG +P +++ +I +I+ +L +E + F K W+
Sbjct: 356 SLGPFFPHLKEPRNIQRIKTVLADEEQSF-------AKTWE------------------- 389
Query: 417 LVLGVKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
+G+K+ + R + ISG AF L+D YG ++ LA +T+ E F
Sbjct: 390 --MGLKHFNHAVNECRANNSKVISGSEAFVLHDRYGFPVDLTCLLAEKDGMTVDLEGFNA 447
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHF-----PVTDDKYKYDYHYDTNSKRYTFPCLDT 529
++ E K S + A+ ID L+ P TDD KY + T
Sbjct: 448 EMKESK-VSAGRVAATKTFIDAYQLEELKTRGIPQTDDAAKYVWEDST------------ 494
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
GD + DK + + + E VG+I TN YA +GGQ+ D G
Sbjct: 495 -------GDLLAIFDKKNSKFISLLEPGNDLGAEG---VGIILSTTNFYAESGGQVYDTG 544
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVV--SSFKVTPGLTSRVEVDARMRLGCMR 647
+ E+ ++ ++ G +VH GN+ S+ + +++VD RL
Sbjct: 545 RL----VAASDSVFEVKKVYNVAGYVVHVGNLSKDSASSIPSSAVVQLQVDYERRLPIAA 600
Query: 648 AHTTSHLLNAALRRVL-------TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
HTT+H LN LRRVL T QK V + DFS Y LS + + VE+
Sbjct: 601 NHTTTHQLNWVLRRVLGEKPDNFTEVQQKGSLVTDEMLRFDFS-YNTKLSNEDLVRVERL 659
Query: 701 INDVIANQVQVDRRHM---RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP-- 755
+N+ I + V R + AS++ L H+ GE YPD V +I I N + P
Sbjct: 660 LNEKIQAGLPVYREEVPLEAASKINGLRHMF---GEKYPDPVSVISIGTPINEMLANPEK 716
Query: 756 ----------CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENG----- 800
C GTH+ N E +I ++ GVR + T + ++ G
Sbjct: 717 EEWRDYAVEFCGGTHLKNLKEAEKAVIISEEALMKGVRRVVVATKSEADKVIKAGAVLKG 776
Query: 801 ------KHLSTAASFSQILNVGNIPYGDDSIAFV 828
K +TA S + L+V N GD I V
Sbjct: 777 QYDELMKKEATATSV-KALSVLNKKVGDSCIPLV 809
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 8/107 (7%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTPAP------YPRVANSQKCIRVGGKHNDLSFAGRD 872
P+ D ++ F+N+GM QFK +FLG T P R ANSQ CIR GGKHNDL GRD
Sbjct: 34 PHDDPTLLFINAGMNQFKALFLG-TADPNTDFGRLKRAANSQMCIRAGGKHNDLEDVGRD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLG+WSF DY+K++A + A E LT+ LP D+LY T+
Sbjct: 93 TYHHTFFEMLGSWSFGDYFKKEAIQWAWELLTE-VYKLPKDQLYVTY 138
>gi|393230342|gb|EJD37949.1| hypothetical protein AURDEDRAFT_116636 [Auricularia delicata
TFB-10046 SS5]
Length = 954
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 264/800 (33%), Positives = 386/800 (48%), Gaps = 72/800 (9%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
+K++R +F D+F GHT V+SS +P+ D ++ F N+GM Q+K++FLG A
Sbjct: 11 SAKNVRKAFFDFF-EKNGHTFVRSSSTIPHEDPTLLFANAGMNQYKSIFLGTVDPKSDLA 69
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + + LT+
Sbjct: 70 KLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITWSWQLLTE 129
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
LP DRLY TYF G+ GL D E RDIWL LG+ + K NFWEMG+TGP
Sbjct: 130 V-YKLPKDRLYVTYFEGNPAAGLEPDHEARDIWLSLGLDPSRVLTGSAKDNFWEMGATGP 188
Query: 188 CGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
CG SEIHYD G ++A VN D ++EIWN VFI R ++ L ++DTG+
Sbjct: 189 CGPCSEIHYDRIGGRNAAHL-VNQDDPLVLEIWNNVFIQFNREDDGSLKSLPAKHVDTGM 247
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV++ Q+K S YDTDLF PL I++++GA+PY F + +DT+YR+++D+
Sbjct: 248 GFERLVSVCQDKHSNYDTDLFAPLFSRIQELTGARPYKGGFGQDDPDGIDTAYRVIADHV 307
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T AL+D P+ + LR ++R + F V+ G L+ + + LGDV+
Sbjct: 308 RTLTFALSDGGVPNNVGRGYVLRRILRRGARFARKKFNVEIGSFFSSLAPTLIDQLGDVF 367
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ + I+ IL EE F + L + + E +Y+
Sbjct: 368 PELTKKYDDIKEILDEEEASFA----------RTLDRGEKLFE--------------RYV 403
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ AR+ E+ G + LYDTYG ++ + +A L + FE E SK
Sbjct: 404 AQ--ARESGAKELGGKDVWRLYDTYGFPVDLTRLMAEELGLGINEADFEAARLHSLEASK 461
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
DI +D+ + D++ T +V + ++ F
Sbjct: 462 GAGKQGNKDIVKLDVHDIAKLEADATVPKTEDSSKFLQGKAAEITAVVKAIYYNKSFVQS 521
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
I S G+I D+TN YA AGGQ +D G + E
Sbjct: 522 TKDITEGES--------------FGVILDRTNFYAEAGGQENDTGSIVIDG----EAAFE 563
Query: 605 IGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
+ + + G ++H G + + KV G T D R HT +H+LN LR L
Sbjct: 564 VSNVQAFNGYVLHVGELKEGTLKV--GDTVLPMYDELRRWPLRNNHTATHILNFCLRETL 621
Query: 664 TCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
QK V + DFS + +++ + +E+ + I V+V + +
Sbjct: 622 GDHIDQKGSLVAPTKLRFDFS-HKAQIALPDLQKIEEGSKEWIRRNVKVFSKEVGLKNGF 680
Query: 723 FLTHLTVIPGEIYPDDVILIDIS--------DKENVISR----EPCCGTHVFNTGHIESC 770
+ L + GE YPD V ++ + D EN R E C GTHV TG I+
Sbjct: 681 KIPGLRAVFGEAYPDPVRVVALEYDVDEIAKDLENPKWRSTSIEFCGGTHVAETGTIKDF 740
Query: 771 TVIGYKSYNHGVRSIKCLTG 790
+ G+R I +TG
Sbjct: 741 IITEESGIAKGIRRIIAVTG 760
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 37 IPHEDPTLLFANAGMNQYKSIFLGTVDPKSDLAKLKRAYNSQKCIRAGGKHNDLEDVGKD 96
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + + LT+ LP DRLY T+
Sbjct: 97 SYHHTFFEMLGNWSFGDYFKKEAITWSWQLLTE-VYKLPKDRLYVTY 142
>gi|443715688|gb|ELU07551.1| hypothetical protein CAPTEDRAFT_94502 [Capitella teleta]
Length = 773
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 259/815 (31%), Positives = 403/815 (49%), Gaps = 81/815 (9%)
Query: 1 MNNPNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNV 60
MN+ S RL SK IRS FLD+F + H V SS +VP DD FVN+GM QFK +
Sbjct: 1 MNHTLFSQCRRLSSKKIRSQFLDFF-RSHDHVFVPSSSVVPSKDDGSYFVNAGMNQFKPI 59
Query: 61 FLGLTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKR 115
FLG T A R NSQKC+RVGGKHNDL GRD HHTFFEMLG+WSF DY+KR
Sbjct: 60 FLGTTEPGSDMAQLKRAVNSQKCIRVGGKHNDLKDVGRDLTHHTFFEMLGSWSFGDYFKR 119
Query: 116 DACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGM 175
+AC MA + LT+ +P D+L TYFGG+ + GL DEE R+IWL +GVP + + GM
Sbjct: 120 EACVMAWQLLTEV-YKIPADQLLVTYFGGNTELGLEPDEECREIWLSIGVPGNRVFPLGM 178
Query: 176 KCNFWEMGSTGPCGYSSEIHYDMKGEPSSAL-ARVNADRNDLIEIWNIVFISHKRVSADT 234
K NFW+MG GPCG +EIH + + S+ L R+ A + E+WN+VF+ R +
Sbjct: 179 KDNFWDMGDCGPCGPCTEIHLNRGLDASANLHERLMAGDPGITELWNLVFMQFNRELDGS 238
Query: 235 IVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRT 294
+ L ++DTG+G ERL +LQ +S YDTDLF P+ E I++V PYG + ++
Sbjct: 239 LRALPACHVDTGMGLERLAAVLQGVSSNYDTDLFRPIFEVIQQVCDCPPYGGATGSDDKH 298
Query: 295 DLDTSYRMLSDYSRMITVALADNMFPDAT---AKLRNVVRDALLISEDVFKVKQGK-LVK 350
+DT+YR+++D+SRM+TVA+ D + P A++R+++ A + F + + L+
Sbjct: 299 SIDTAYRIIADHSRMLTVAMGDGLVPGRKGLDARVRHIMYRAFMHG---FALNAPRGLLA 355
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
+L + + LG+ +PE+ +++Q +I+ E R + +++ K K +K Q
Sbjct: 356 DLVPVVVDSLGEAFPELVAVPHQMQDVIITTEQRYSEQMKETE-KSMKKALKASSVPHQL 414
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
+ E +V G T + + + + +D + +Q++
Sbjct: 415 STQEAERIVKGFYGSTT----NADLLSLCAESMGVQFDVDAFHNHGLQQV---------- 460
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
+ ++ +K + A N +++ + + P TDD +KY NS C
Sbjct: 461 ---RRSPTSVRSLAKERPALNQYEVEYLLQRGVPPTDDTFKYSTF---NSDHPILNC--- 511
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
D F A G + VG+I D++ Y+ GGQ+ D G
Sbjct: 512 --------DGKF---------AECG--------KEGEVVGVILDRSAFYSEGGGQVADQG 546
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRA 648
TT + ++++ ++ ++H ++ S V + ++ D R + C
Sbjct: 547 ----EMTTVQGCRMQVLDVQKTGVFVLHTCRLLRGSLSVGESVIMHIDQDLRHKSAC--N 600
Query: 649 HTTSHLLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
HT +HLLN ALR+VL C +Q V + +F +S D + + +N I
Sbjct: 601 HTATHLLNFALRKVLDCDVWQAGSSVNPERLVFEFRSLKTQISADEIERISDEVNKCINA 660
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS--------DKENVISREPCCGT 759
+V R + ++ HL + E+YP+ V +I + + S E C GT
Sbjct: 661 HSEVYRSTVALRDIEAHPHLVKLDQEVYPNQVAVISVGRPLDLNADESSERYSLELCGGT 720
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSK 794
HV NT I + + G + + LTG S+K
Sbjct: 721 HVQNTADIGGFVISYFHGSGQGTKKVTALTGASAK 755
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P DD FVN+GM QFK +FLG T A R NSQKCIRVGGKHNDL GRD
Sbjct: 39 VPSKDDGSYFVNAGMNQFKPIFLGTTEPGSDMAQLKRAVNSQKCIRVGGKHNDLKDVGRD 98
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLG+WSF DY+KR+AC MA + LT+ +P D+L T+
Sbjct: 99 LTHHTFFEMLGSWSFGDYFKREACVMAWQLLTE-VYKIPADQLLVTY 144
>gi|50286987|ref|XP_445923.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525229|emb|CAG58842.1| unnamed protein product [Candida glabrata]
Length = 956
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 264/817 (32%), Positives = 395/817 (48%), Gaps = 98/817 (11%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++R +F+DYF + H VKSSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQKWTAHNVRKTFMDYF-EEKNHKYVKSSPVVPFDDPTLLFTNAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
P+ R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 62 DPSSDFYTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAIDY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
A + LT+ +P DRLY TYF G + GL D E D+W ++GVP DHI K NFW
Sbjct: 122 AWKLLTEV-YGIPADRLYVTYFEGDAKQGLEPDTEALDLWKKVGVPEDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D D++E+WN+VF+ R ++ L
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNQDDPDVLEVWNLVFMQFNREQDGSLKSLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F+PL I++++GA+PY F ++ ++DT+Y
Sbjct: 240 KHIDTGMGFERLVSVLQDVRSNYDTDVFMPLFARIQEITGARPYAGKFGDEDKDNIDTTY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R + ALAD P+ + LR ++R + G L+ +
Sbjct: 300 RVLADHVRTLVFALADGGVPNNEGRGYVLRRILRRGARFARKYMNYPIGNFFSSLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ + ++PE+ + + IL EE F K L + + E++
Sbjct: 360 DQVKHIFPEVAKDPSFLFEILDEEESSFS----------KTLDRGERIFEKY-------- 401
Query: 418 VLGVKYLTKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
A S TE + G + LYDTYG ++ + +A + L + FE+
Sbjct: 402 -----------AAAASQTESKTLDGKQVWRLYDTYGFPVDLTELMAEEQNLKIDGPGFEK 450
Query: 475 KLNELKERSKAKAAS--------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPC 526
E E SK NV I ++ ++ P TDD +KY
Sbjct: 451 AKQESYEASKRGGQKGGDDLIKLNVHSIAELNSENVPKTDDSFKYG-------------- 496
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
+ N+ G ++ G + E G+I DKT YA GGQ
Sbjct: 497 -NENVEGKIL-------------KLHDGEKFVTEISEPGKKYGIILDKTCFYAEQGGQEY 542
Query: 587 DIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCM 646
D G + + + + + G + H G +S K++ D R
Sbjct: 543 DTGKIVIDDKAE----FSVENVQLYNGFVFHTG-TLSEGKLSVDDVIIASYDELRRFPIK 597
Query: 647 RAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI 705
HT +H+LN AL+ L QK V ++ DFS + + L+++ V VE N+ I
Sbjct: 598 NNHTGTHILNYALKETLGNDIDQKGSLVAPEKLRFDFS-HKKALTIEEVTKVENICNEQI 656
Query: 706 ANQVQVDRRHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISDKE-NVISR 753
N V + + + + + GE YPD D +L + S++E S
Sbjct: 657 KNNYNVYYKDVPLDLAKSIYSVRAVFGETYPDPVRVVSVGKPVDDLLANPSNEEWGKYSI 716
Query: 754 EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
E C GTHV TG I+ ++ G+R I +TG
Sbjct: 717 EFCGGTHVKTTGDIKYFVILEESGIAKGIRRIVAVTG 753
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + P+ R NSQKCIR GGKHNDL G+D
Sbjct: 36 VPFDDPTLLFTNAGMNQYKPIFLGTVDPSSDFYTLKRAYNSQKCIRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A A + LT+ +P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAIDYAWKLLTE-VYGIPADRLYVTY 141
>gi|145346253|ref|XP_001417607.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577834|gb|ABO95900.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 967
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 265/805 (32%), Positives = 395/805 (49%), Gaps = 93/805 (11%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
S +R +F++YF QGH SSP VP D ++ F N+GM Q+K +FLG A
Sbjct: 30 SSRVRDTFVNYFIEKQGHVNWPSSPAVPVNDPTLLFANAGMNQYKPIFLGKADPKTAFAK 89
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K +A MA + LT
Sbjct: 90 LTRATNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEAIGMAWDLLTNV 149
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
L DRLY TYFGG + GL D E + IWL+ +P + G NFWEMG GPC
Sbjct: 150 -YGLAPDRLYATYFGGDESQGLQPDLEAKAIWLKY-LPESRVMPFGCADNFWEMGDVGPC 207
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G +EIHYD G +A + VN D + +EIWN+VFI + R + L ++DTG+G
Sbjct: 208 GPCTEIHYDRIGGRDAA-SLVNMDDPNCLEIWNVVFIQYNREEGGVLKSLPSKHVDTGMG 266
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
FERL +ILQNK S YDTD+F+P+ + I+++SGA PY + + D +YR+++D+ R
Sbjct: 267 FERLTSILQNKMSNYDTDVFMPIFKEIQRISGAAPYTGLLGKEDVGEKDMAYRVVADHIR 326
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
+++A+AD P + + LR V+R A+ + KQG +L + + LG V+P
Sbjct: 327 TLSIAIADGAAPGSDGRNYVLRRVLRRAVRFGREKLGAKQG-FFHKLVPCLIQQLGAVFP 385
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E+ I I+ +E F Q ++QF G VL
Sbjct: 386 ELVAKQTHITEIIADEEESFGR-------------TLQKGIDQF------GKVLAA---A 423
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
KQ R T ISG AF L+++YG ++ + +A TL +E F Q E +E+S+A
Sbjct: 424 KQEGR----TVISGPEAFLLWESYGFPNDLTELMAEENGFTLDNEGFAQAFAEAQEKSRA 479
Query: 486 KAASN--------VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
+ + +T D+ KY S R P L++ + I+
Sbjct: 480 GGKKSGGVQLLFEAEATAWLQNNGVAITKDEEKY------ASGR---PTLESTVTAIM-- 528
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
S + + G D T YA +GGQ+ D G+ T
Sbjct: 529 ---------------SPSGFIKSTSDAEGPYGFFMDATTFYAESGGQVCDSGL-----IT 568
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+G + + ++ ++H G+V S V+ G ++ VD R M HT +H+LN
Sbjct: 569 TPSGSMSVSDVKVAAAYVMHTGDV--SGTVSVGDAAKCAVDYDRRDNIMPNHTMTHVLNY 626
Query: 658 ALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR+V+ QK V ++ DFS + + + +A +E +N+ I +++ VD+R +
Sbjct: 627 ALRKVMGDGVDQKGSLVDEEKLRFDFS-HNKGATTKQIAEIEAIVNEQIKSKLAVDKREV 685
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDIS------------DKENVISREPCCGTHVFNT 764
+ + L + GE+YPD V ++ + DK S E C GTH+ +T
Sbjct: 686 ALDKAMTINGLRAVFGEVYPDPVRVVSVGPSIDDLLANPSDDKWKNYSIEFCGGTHLAST 745
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLT 789
E ++ G+R I T
Sbjct: 746 DFAEQFVILEESGIAKGIRRITGAT 770
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 69/107 (64%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K +FLG A R N+QKCIR GGKHNDL G+D
Sbjct: 56 VPVNDPTLLFANAGMNQYKPIFLGKADPKTAFAKLTRATNTQKCIRAGGKHNDLDDVGKD 115
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K +A MA + LT L DRLY T+
Sbjct: 116 TYHHTFFEMLGNWSFGDYFKEEAIGMAWDLLTN-VYGLAPDRLYATY 161
>gi|157869507|ref|XP_001683305.1| putative alanyl-tRNA synthetase [Leishmania major strain Friedlin]
gi|68224189|emb|CAJ04856.1| putative alanyl-tRNA synthetase [Leishmania major strain Friedlin]
Length = 962
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 283/871 (32%), Positives = 415/871 (47%), Gaps = 113/871 (12%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPA 67
S+ +R F+DYF QGHT V SSP+ P+ D ++ F+N+GM QFK +FLG T
Sbjct: 2 SFTEWPVSRVRQEFVDYF-KKQGHTFVPSSPVCPHDDPTLLFINAGMNQFKALFLG-TAD 59
Query: 68 P------YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMA 121
P R ANSQ C+R GGKHNDL GRD+YHHTFFEMLG+WSF DY+K++A + A
Sbjct: 60 PNTDFGRLKRAANSQMCIRAGGKHNDLEDVGRDTYHHTFFEMLGSWSFGDYFKKEAIQWA 119
Query: 122 LEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWE 181
E LT+ LP D+LY TYF G + GL D E +++W +L +P I K NFWE
Sbjct: 120 WELLTE-VYKLPKDQLYVTYFEGDESNGLDPDLEAKELWGQL-LPESQIVPGNAKDNFWE 177
Query: 182 MGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
MG TGPCG SE+H+D G ++A + VN D ++EIWN+VF+ +R + + PL +
Sbjct: 178 MGDTGPCGPCSEVHFDRIGRRNAA-SLVNKDDPMVVEIWNLVFMQFERRAGGFLTPLPQK 236
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
+IDTG+G ERL +ILQ S YDTD ++PL E I+ +G +D +YR
Sbjct: 237 HIDTGMGLERLTSILQGVKSNYDTDAWIPLFEAIQTATGYPKSYAEIRNDPDSDALVAYR 296
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAE 358
+++D+ R +T A+ D + PD+ + LR ++R A+ K G +L ++
Sbjct: 297 VVADHIRCLTSAVGDGVMPDSVGRGFVLRRIIRRAVRYGVQFLGAKPG-FFTQLVDSVCT 355
Query: 359 ILGDVYPEIQD--SINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
LG +P +++ +I +I+ +L +E + F K W+
Sbjct: 356 SLGPFFPHLKEPRNIQRIKAVLADEEQSF-------AKTWE------------------- 389
Query: 417 LVLGVKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
+G+K+ + R S ISG AF L+D YG ++ LA +T+ E F
Sbjct: 390 --MGLKHFNHAVNECRANSSKVISGSEAFVLHDRYGFPVDLTCLLAEKDGMTVDLEGFNT 447
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHF-----PVTDDKYKYDYHYDTNSKRYTFPCLDT 529
++ E K S + A+ ID L+ P T+D KY + + YT
Sbjct: 448 EMKESK-VSAGRVAATKTFIDAYQLEELKTRGIPQTNDAAKYVW------EDYT------ 494
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
GD + DK + + + E VG+I TN YA +GGQ+ D G
Sbjct: 495 -------GDVLAIFDKKNSKFISLLEPGNDLGAEG---VGIILSTTNFYAESGGQVYDTG 544
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRV---EVDARMRLGCM 646
+ E+ + ++ G +VH GN +S + +P +S V +VD RL
Sbjct: 545 RL----VAASDSVFEVKKAYNVAGYVVHVGN-LSKYSASPIPSSAVVQLQVDYERRLPIA 599
Query: 647 RAHTTSHLLNAALRRVL-------TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
HTT+H LN LRRVL T QK V + DFS Y LS + + VE+
Sbjct: 600 ANHTTTHQLNWVLRRVLGEKPDNFTEVQQKGSLVTDEMLRFDFS-YNTKLSNEDLVRVEQ 658
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP---- 755
+N+ I + V R + + L + GE YPD V +I I N + P
Sbjct: 659 LLNEKIQAGLLVYREEVPLEAASKINGLRQMFGEKYPDPVSVISIGTPINEMLANPEKEE 718
Query: 756 --------CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL---- 803
C GTH+ N E +I ++ GVR + T + ++ G L
Sbjct: 719 WRDYAVEFCGGTHLKNLKEAEKAVIISEEALMKGVRRVVVATRLEADKVIKAGAELKRQY 778
Query: 804 ------STAASFSQILNVGNIPYGDDSIAFV 828
A+ + L+V N GD I V
Sbjct: 779 DELMKKEATATSVKALSVLNKNVGDSCIPLV 809
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 8/107 (7%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTPAP------YPRVANSQKCIRVGGKHNDLSFAGRD 872
P+ D ++ F+N+GM QFK +FLG T P R ANSQ CIR GGKHNDL GRD
Sbjct: 34 PHDDPTLLFINAGMNQFKALFLG-TADPNTDFGRLKRAANSQMCIRAGGKHNDLEDVGRD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLG+WSF DY+K++A + A E LT+ LP D+LY T+
Sbjct: 93 TYHHTFFEMLGSWSFGDYFKKEAIQWAWELLTE-VYKLPKDQLYVTY 138
>gi|219124287|ref|XP_002182439.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406400|gb|EEC46340.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 955
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 286/864 (33%), Positives = 414/864 (47%), Gaps = 129/864 (14%)
Query: 15 KSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-----LTPAPY 69
+ +R +F +YF GH SSP VP D ++ F N+GM Q+K +FLG L +
Sbjct: 18 EKVRDTFKNYFVEQHGHVFWPSSPCVPVDDPTLLFTNAGMNQYKPLFLGTCDPNLEMSKL 77
Query: 70 PRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP 129
R NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K A MA + LT
Sbjct: 78 TRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKAGAIDMAWQCLT--- 134
Query: 130 VSLPLD--RLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
V+ LD RLY TYF G + P DEE R +WL +P D + + NFWEMG+TGP
Sbjct: 135 VTFGLDPERLYATYFAGDEL--TPVDEEARQLWLRY-LPDDRVLPFDARDNFWEMGATGP 191
Query: 188 CGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
CG +EIHYD + G +S L VNAD D++EIWN+VFI + R + ++ PL ++DTG
Sbjct: 192 CGPCTEIHYDRIGGRDASKL--VNADLPDVMEIWNVVFIQYNREADGSLRPLPAQHVDTG 249
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERL +ILQN S YDTD+F+PL I+ ++GA+PY + + +D +YR+++D+
Sbjct: 250 MGFERLTSILQNVDSNYDTDIFIPLFTAIQNITGARPYAKKVGKEDPEYIDMAYRVVADH 309
Query: 307 SRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGK--LVKELSY------NIAE 358
R + A+ D P N R +L V+ G+ L EL + +
Sbjct: 310 IRTLCFAITDGAVP------SNDGRGYVLRRVLRRAVRYGRQNLGAELGFFAKLVPAFVD 363
Query: 359 ILGDVYPEIQDSINKIQLILGEESRIFD-NLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
++G +PE+ + + I+ EE F L K L++FN + E
Sbjct: 364 VMGSAFPEVVEKQEYVTGIIQEEEESFSRTLDKG--------------LQKFNELAE--- 406
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
K Q+ SG A LY + G ++ + +A K +TL E FE K+
Sbjct: 407 ----KVGADQI--------FSGADAHFLYTSMGFPVDLTELMAEEKGMTLNKEEFEAKMQ 454
Query: 478 ELKERSKAKAASNVPDIDLMDLK------------HFPVTDDKYKYDYHYDTNSKRYTFP 525
E + S+A + + D++ + TDD KY +H +
Sbjct: 455 EEHDISQAAHLAKMAGGSGKDMRLVAEQTSYLVGQNISATDDAAKYVWHEELADCVVKAC 514
Query: 526 CLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQI 585
+ N +IG + SI E +A VG++ DK++ YA AGGQ+
Sbjct: 515 FIGRNETEDMIG------------------FVGSISPESSA-VGIVLDKSSFYAEAGGQV 555
Query: 586 DDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
D+G T T+ V+I + + ++H G V S ++ G T + VD R
Sbjct: 556 YDVG----TLTSSTGAVVKITNVQAYGQFVLHLGEVASG-TLSVGDTVKCSVDYVRRAPI 610
Query: 646 MRAHTTSHLLNAALRRVL----------TCTY---QKSCRVFSDECALDFSVYGETLSVD 692
HT +H+LN ALR VL T T QK V + DFS G+ L+ +
Sbjct: 611 ASNHTMTHVLNHALREVLIKRPEKESGKTSTLTVDQKGSLVDETKLRFDFSWSGQ-LTPE 669
Query: 693 SVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISD------ 746
+A VEK D I N V VD + ++ L + GE YPD V ++ +SD
Sbjct: 670 QLAEVEKLCMDRIVNAVPVDAYVAPLGDAQQISSLRAVFGEKYPDPVRVVAVSDHAVPEM 729
Query: 747 -------KENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN 799
+ N S E C GTH+ NT E+ ++ + G+R I +T +K A+
Sbjct: 730 LANPQDSQWNEYSVEFCGGTHLTNTKEAEAFVLLAEEGIAKGIRRITAITTGEAKKAI-- 787
Query: 800 GKHLSTAASFSQILNVGNIPYGDD 823
+ A F L + GDD
Sbjct: 788 ----ALANEFESKLTAAEVVQGDD 807
Score = 113 bits (283), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 70/109 (64%), Gaps = 10/109 (9%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-----LTPAPYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K +FLG L + R NSQKCIR GGKHNDL G+D
Sbjct: 43 VPVDDPTLLFTNAGMNQYKPLFLGTCDPNLEMSKLTRAVNSQKCIRAGGKHNDLDDVGKD 102
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLD--RLYFTF 919
YHHTFFEMLGNWSF DY+K A MA + LT V+ LD RLY T+
Sbjct: 103 VYHHTFFEMLGNWSFGDYFKAGAIDMAWQCLT---VTFGLDPERLYATY 148
>gi|397634541|gb|EJK71470.1| hypothetical protein THAOC_07085 [Thalassiosira oceanica]
Length = 1072
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 272/816 (33%), Positives = 400/816 (49%), Gaps = 103/816 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-----LTPAPYPR 71
+RS+F+ +F GHT +SSP VPY D ++ F N+GM Q+K +FLG + A R
Sbjct: 124 VRSTFISFF-ERNGHTFWRSSPCVPYDDPTLLFTNAGMNQYKPLFLGTVDPNVEMAGLKR 182
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++A MA + LT+
Sbjct: 183 ACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEAIEMAWKCLTEE-FG 241
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +RLY TYFGG + PCD+E RDIWL+ +P + + K NFWEMG+TGPCG
Sbjct: 242 LDPERLYATYFGGDES--TPCDDEARDIWLQF-LPAERVLPFDAKDNFWEMGATGPCGPC 298
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
+EIHYD G +A + VNAD D+IEIWN VFI R + ++ PL ++DTG+GFER
Sbjct: 299 TEIHYDRIGNRDAA-SLVNADLPDVIEIWNNVFIQFNREADGSLRPLPAQHVDTGMGFER 357
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
L +ILQ S YDTD+F+PL + I ++GA+PY + + +D +YR+++D+ R ++
Sbjct: 358 LTSILQGVDSNYDTDIFIPLFDAIRSITGARPYAGKIGSEDEGYVDMAYRVVADHVRTLS 417
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A+AD P + LR V+R A+ + G K L + +++GD +PE++
Sbjct: 418 FAIADGAVPSNDGRGYVLRRVLRRAVRYGRQNLNAELGFFAK-LVRTLVDLMGDTFPELR 476
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+ I ++ EE F + E+K + + + F
Sbjct: 477 EKEEYITSVIREEEESFSKTVDKGIVEFKKMCDALGDQKTF------------------- 517
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK-- 486
G AFTL+ G ++ + + + L L F+ KL E +++SK
Sbjct: 518 ---------PGADAFTLFAERGFPVDLTELMCEERGLVLDTAGFDAKLKEEQDKSKEAHL 568
Query: 487 ---AASNVPDIDLMDL-------KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+A D+ L+ K TDD KY + D +L G +
Sbjct: 569 KKMSAGTGKDMRLVAEQTSHLVGKGVDPTDDSAKYVW--------------DDDLTGSTV 614
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
+ + ++ +DSI E A VG++ DKTN Y AGGQI D G +
Sbjct: 615 --KALFVGRNETEDGV--GFVDSITPESGA-VGIVLDKTNFYGEAGGQIYDTG----SIV 665
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+E+ + ++H G V S VT ++ +VD R HT +H+LN
Sbjct: 666 AASGATIEVTNVQVYGSFVLHLGEVKSG-TVTVDESATCKVDYARRSPVAANHTMTHVLN 724
Query: 657 AALRRVLTCTYQKSCR--------VFSDECAL--DFSVYGETLSVDSVAAVEKYINDVIA 706
ALR VL + S DE L DFS G L+ D +AAVE+ + I
Sbjct: 725 HALRDVLVTRAESSSAGAAVDQKGSLCDESKLRFDFSWSG-ALTADQLAAVERMCVETIE 783
Query: 707 NQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS-------------DKENVISR 753
V VD + ++ L + GE YPD V ++ +S ++ N S
Sbjct: 784 RGVPVDTLVAALDDARSISSLRAVFGETYPDPVRVVAVSSSPISDMLANPSDERWNDYSV 843
Query: 754 EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLT 789
E C GTH+ NT + ++ + G+R I +T
Sbjct: 844 EFCGGTHLKNTSEAKGFVLLSEEGIAKGIRRITAVT 879
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-----LTPAPYPRVANSQKCIRVGGKHNDLSFAGRD 872
+PY D ++ F N+GM Q+K +FLG + A R NSQKCIR GGKHNDL G+D
Sbjct: 146 VPYDDPTLLFTNAGMNQYKPLFLGTVDPNVEMAGLKRACNSQKCIRAGGKHNDLDDVGKD 205
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++A MA + LT+ L +RLY T+
Sbjct: 206 VYHHTFFEMLGNWSFGDYFKKEAIEMAWKCLTE-EFGLDPERLYATY 251
>gi|401412520|ref|XP_003885707.1| hypothetical protein NCLIV_061050 [Neospora caninum Liverpool]
gi|325120127|emb|CBZ55681.1| hypothetical protein NCLIV_061050 [Neospora caninum Liverpool]
Length = 1034
Score = 394 bits (1013), Expect = e-106, Method: Compositional matrix adjust.
Identities = 282/871 (32%), Positives = 425/871 (48%), Gaps = 129/871 (14%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP--- 70
+++RS+++D+F GH + SSP++P GD+++ F+N+GM QFK +FLG P
Sbjct: 26 GEAVRSAYVDFF-EVHGHLIYPSSPVIPRGDNTLLFINAGMNQFKPIFLGQVDRNSPLSK 84
Query: 71 --RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
RV ++QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+KRDA A + LT+
Sbjct: 85 LRRVTDTQKCIRAGGKHNDLEDVGKDVYHHTFFEMLGNWSFGDYFKRDAIAWAWQLLTEV 144
Query: 129 PVSLPLDRLYFTYFGGSDQYGL-PCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
+P DRLY +YFGG + P D E RD+WL+ +P + + G K NFWEM TGP
Sbjct: 145 -YKIPKDRLYASYFGGDPRLPTCPPDNEARDLWLQY-LPPNRVLPFGAKENFWEMADTGP 202
Query: 188 CGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
CG SEIHYD + G +S+L VNAD ++EIWN+VF+ + R ++ PL +DTG
Sbjct: 203 CGPCSEIHYDRIGGRDASSL--VNADDPSVLEIWNLVFMQYNREKDGSLTPLPAPCVDTG 260
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVS-GAKPYGRTFTTSNRTDLDTSYRMLSD 305
+G ER+ ++LQ+K S YDTDLF+ L + I +++ G +PY ++ +D +YR+L+D
Sbjct: 261 MGLERVASVLQDKQSNYDTDLFIALFDKIAELTPGLRPYEGKIGEEDKDLIDMAYRVLAD 320
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
++R +T A+AD P + LR ++R A+ + +K+G + +S + +LG
Sbjct: 321 HARCLTAAIADGAEPSNEGRGYVLRRILRRAVRYARQTLGMKEGAFPQLVSV-VVSLLGS 379
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE++ + K+ IL +E + F V+ +K + N ++ G+ +
Sbjct: 380 TFPEMKKNEEKVIRILHKEEQQFSRTLDNGVERFKKVA---------NSLKAKGVKV--- 427
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
G AFTLY TYG ++ Q +A L + E FE+K + +
Sbjct: 428 --------------FPGSEAFTLYSTYGFPLDLTQLMAEEVGLQVDAEEFERKFDAHRVA 473
Query: 483 S-----KAKAASNV----PDID--LMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNL 531
S K A V PD L ++ TDD KY ++ +L
Sbjct: 474 SENTSFKQGGAGAVYALPPDQHHLLAKNRNLAPTDDSAKYQWNV-------------KDL 520
Query: 532 VGIVIGDQVFCIDKHAI--------RHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGG 583
+V D V A R A A++ S E+ +V +I DKT YA GG
Sbjct: 521 AALVAQDAVEAAPVKAKVAAIWDGKRFAPDAAAVASPTSEN--FVAVILDKTCFYAEQGG 578
Query: 584 QIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRL 643
Q+ D+G ++ E E+ + ++H G VS + G VD R
Sbjct: 579 QVGDVGRLVDLSSGAE---FEVIDSQKSGDYVLHIG-TVSKGTLKEGSELVPLVDYVRRF 634
Query: 644 GCMRAHTTSHLLNAALRRVLTCTYQK------------------SC---RVFSD------ 676
+ HT +HLLN ALR VL +K SC R SD
Sbjct: 635 KLAQHHTGTHLLNFALREVLVRKMRKNAEGGDKREDTNGLHIRESCLNERELSDEEDIQQ 694
Query: 677 ------ECALDFSVYGET-LSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTV 729
E L F GE + + + AVE + D IA + V R + + + L
Sbjct: 695 KGSLVEEKRLRFDYAGEKPMENEDILAVENVVKDCIARERPVHYREIALEQAMKIPGLRA 754
Query: 730 IPGEIYPDDVILIDI-SDKENVI-------------SREPCCGTHVFNTGHIESCTVIGY 775
+ GE+YPD V ++ + S E+++ S E C GTH+ N I+ +I
Sbjct: 755 VFGEVYPDPVRVVSVGSPIEDLVELAVSGKGETPFASIELCGGTHLHNAAQIQDFCIISE 814
Query: 776 KSYNHGVRSIKCLTGDSSKAAVENGKHLSTA 806
+S GVR + +TGD + A + + L A
Sbjct: 815 ESVAKGVRRVVAVTGDPALEARKELEELEKA 845
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP GD+++ F+N+GM QFK +FLG P RV ++QKCIR GGKHNDL G+D
Sbjct: 51 IPRGDNTLLFINAGMNQFKPIFLGQVDRNSPLSKLRRVTDTQKCIRAGGKHNDLEDVGKD 110
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+KRDA A + LT+ +P DRLY ++
Sbjct: 111 VYHHTFFEMLGNWSFGDYFKRDAIAWAWQLLTE-VYKIPKDRLYASY 156
>gi|389601275|ref|XP_001565061.2| putative alanyl-tRNA synthetase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504973|emb|CAM45216.2| putative alanyl-tRNA synthetase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 962
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 270/834 (32%), Positives = 404/834 (48%), Gaps = 99/834 (11%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPA 67
S++ +R F+DYF QGHT V SP+ P+ D ++ F+N+GM QFK +FLG T
Sbjct: 2 SFIEWPVSRVRQKFVDYF-KKQGHTFVPGSPVCPHDDPTLLFINAGMNQFKTLFLG-TAD 59
Query: 68 P------YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMA 121
P RVANSQ C+R GGKHNDL GRD+YHHTFFEMLG+WSF DY+K++A + A
Sbjct: 60 PNTDFGRLKRVANSQMCIRAGGKHNDLEDVGRDTYHHTFFEMLGSWSFGDYFKKEAIQWA 119
Query: 122 LEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWE 181
E LT+ LP D+LY TYF G + GL D E +++W + +P I K NFWE
Sbjct: 120 WELLTE-VYKLPKDQLYVTYFEGDVKNGLDPDLEAKELWGQF-LPESQIIPGNAKDNFWE 177
Query: 182 MGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
MG TGPCG SE+H+D G ++A VN D ++EIWN+VF+ +R + + PL +
Sbjct: 178 MGDTGPCGPCSEVHFDRIGGRNAA-GLVNKDDPMVVEIWNLVFMQFERRTDGLLTPLPQK 236
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
++DTG+G ERL +ILQ S YDTD+++P+ E I+ +G + + +D +YR
Sbjct: 237 HVDTGMGLERLTSILQGVKSNYDTDVWIPIFEAIQTATGYRKSYVEIRSEPDSDALVAYR 296
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAE 358
+++D+ R +T A+ D + PD+ + LR ++R A+ G +L ++
Sbjct: 297 VVADHIRCLTSAVGDGVMPDSVGRGFVLRRIIRRAVRYGVQFLGADPG-FFTQLVDSVCA 355
Query: 359 ILGDVYPEIQD--SINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
LG +P ++D +I +I+ +L +E + F K W+
Sbjct: 356 SLGPFFPHLKDPRNIQRIKAVLADEEQSF-------AKTWE------------------- 389
Query: 417 LVLGVKYLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF-- 472
+G+K+ R + ISG AF L+D YG ++ LA +T+ E F
Sbjct: 390 --MGLKHFNHAAGECRANNSRVISGSEAFVLHDRYGFPVDLTCLLAEKDGMTVDLEGFNA 447
Query: 473 EQKLNELKERSKAKAASNVPDIDLMDLKH--FPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
E K N++ A A + + L DLK P TDD KY + T
Sbjct: 448 EMKANQVSAGRVAAAKTFIDAYQLEDLKKRAIPQTDDGAKYAWEDST------------- 494
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
G+ + DK R + + E VG+I + TN YA +GGQ+ D G
Sbjct: 495 ------GEVLAIFDKKNSRFISLLEPGNDLGAEE---VGIILNATNFYAESGGQVYDTGR 545
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNVV--SSFKVTPGLTSRVEVDARMRLGCMRA 648
+ E+ ++ ++ G +VH G + S+ + +++VD RL
Sbjct: 546 L----VAARDCVFEVKKVYNVGGYVVHVGKLSKDSASPIPLSALVQMQVDYERRLPIAAN 601
Query: 649 HTTSHLLNAALRRVL-------TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYI 701
HTT+H LN LRRVL T QK V + DFS + LS + + VEK +
Sbjct: 602 HTTTHQLNWTLRRVLEENPANFTEVQQKGSLVTDEMLRFDFS-HHTKLSNEDLVRVEKLL 660
Query: 702 NDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------ 755
N+ I + V R + + + L + GE YPD V +I I N + P
Sbjct: 661 NEKIQAGLPVYREEVPLAAASKINGLRQMFGEKYPDPVSVISIGAPINEMLANPEKEEWR 720
Query: 756 ------CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
C GTH+ N E +I ++ GVR + T + A++ G L
Sbjct: 721 DYAVEFCGGTHLSNLKEAEKAVIISEEALMKGVRRVVVATKAEADKAIKAGAEL 774
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 75/107 (70%), Gaps = 8/107 (7%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTPAP------YPRVANSQKCIRVGGKHNDLSFAGRD 872
P+ D ++ F+N+GM QFK +FLG T P RVANSQ CIR GGKHNDL GRD
Sbjct: 34 PHDDPTLLFINAGMNQFKTLFLG-TADPNTDFGRLKRVANSQMCIRAGGKHNDLEDVGRD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLG+WSF DY+K++A + A E LT+ LP D+LY T+
Sbjct: 93 TYHHTFFEMLGSWSFGDYFKKEAIQWAWELLTE-VYKLPKDQLYVTY 138
>gi|401841914|gb|EJT44225.1| ALA1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 958
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 269/817 (32%), Positives = 395/817 (48%), Gaps = 98/817 (11%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++R++FLDYF + + H VKSSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQKWTAANVRNTFLDYFKSKE-HKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
PA R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K +A
Sbjct: 62 DPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKIEAVTY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ LT+ +P DRLY TYF G ++ GL D E R++W GVP DHI K NFW
Sbjct: 122 SWTLLTEV-YGIPKDRLYVTYFEGDEKLGLEPDIEARELWRNAGVPDDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D D++E+WN+VFI R ++ L
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNMDDPDVLEVWNLVFIQFNREQDGSLKSLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F PL E I++++ KPY F + +DT+Y
Sbjct: 240 KHIDTGMGFERLVSVLQDVRSNYDTDVFTPLFERIQEITSVKPYSGKFGEDDSDGVDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R +T ALAD P+ + LR ++R + G L+ +
Sbjct: 300 RVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
E + D++PE+ + IL EE F KT E+
Sbjct: 360 EQVQDIFPELAKDPAFLFEILDEEEASF--------------AKTLDRGER--------- 396
Query: 418 VLGVKYLTKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
L ++ A S TE + G + LYDTYG ++ + +A + L + FE+
Sbjct: 397 ------LFEKYASAASKTESRTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEK 450
Query: 475 KLNELKERSKAKAAS--------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPC 526
E E SK NV ++ ++ + P T+D++KY
Sbjct: 451 AKQESYEASKRGGKKDQSDLIKLNVHELSELNDANVPKTNDEFKYG-------------- 496
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
N+ + I G + E G+I DKT YA GGQ
Sbjct: 497 -SANV-------------ESTILKLHDGTKFVNEITEPGRKYGIILDKTCFYAEQGGQEY 542
Query: 587 DIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCM 646
D G + + + N VE +L + G + H G++ K++ G D R
Sbjct: 543 DTGKIVIDDAAEFN--VENVQLYN--GFVFHTGSLEEG-KLSVGDKIIASFDELRRFPIK 597
Query: 647 RAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI 705
HT +H+LN AL+ L QK V S++ DFS Y + ++ D + +E N I
Sbjct: 598 NNHTGTHILNFALKETLGNDIDQKGSLVASEKLRFDFS-YKKAVTGDELKNIEDTCNQQI 656
Query: 706 ANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISR 753
+QV + + + + + GE YPD V ++ + +++ S
Sbjct: 657 KENLQVFYKEIPLELAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYSI 716
Query: 754 EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
E C GTHV TG I+ ++ G+R I +TG
Sbjct: 717 EFCGGTHVNKTGDIKYFVILEESGIAKGIRRIVAVTG 753
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + PA R NSQKCIR GGKHNDL G+D
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFLGTVDPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K +A + LT+ +P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKIEAVTYSWTLLTE-VYGIPKDRLYVTY 141
>gi|365758219|gb|EHN00072.1| Ala1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 958
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 269/817 (32%), Positives = 395/817 (48%), Gaps = 98/817 (11%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++R++FLDYF + + H VKSSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQKWTAANVRNTFLDYFKSKE-HKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
PA R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K +A
Sbjct: 62 DPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKIEAVTY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ LT+ +P DRLY TYF G ++ GL D E R++W GVP DHI K NFW
Sbjct: 122 SWTLLTEV-YGIPKDRLYVTYFEGDEKLGLEPDIEARELWRNAGVPDDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D D++E+WN+VFI R ++ L
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNMDDPDVLEVWNLVFIQFNREQDGSLKSLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F PL E I++++ KPY F + +DT+Y
Sbjct: 240 KHIDTGMGFERLVSVLQDVRSNYDTDVFTPLFERIQEITSVKPYSGKFGEDDSDGVDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R +T ALAD P+ + LR ++R + G L+ +
Sbjct: 300 RVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
E + D++PE+ + IL EE F KT E+
Sbjct: 360 EQVQDIFPELAKDPAFLFEILDEEEASF--------------AKTLDRGER--------- 396
Query: 418 VLGVKYLTKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
L ++ A S TE + G + LYDTYG ++ + +A + L + FE+
Sbjct: 397 ------LFEKYASAASKTESRTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEK 450
Query: 475 KLNELKERSKAKAAS--------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPC 526
E E SK NV ++ ++ + P T+D++KY
Sbjct: 451 AKQESYEASKRGGKKDQSDLIKLNVHELSELNDANVPKTNDEFKYG-------------- 496
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
N+ + I G + E G+I DKT YA GGQ
Sbjct: 497 -SANV-------------ESTILKLHDGTKFVNEITEPGRKYGIILDKTCFYAEQGGQEY 542
Query: 587 DIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCM 646
D G + + + N VE +L + G + H G++ K++ G D R
Sbjct: 543 DTGKIVIDDAAEFN--VENVQLYN--GFVFHTGSLEEG-KLSVGDKIIASFDELRRFPIK 597
Query: 647 RAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI 705
HT +H+LN AL+ L QK V S++ DFS Y + ++ D + +E N I
Sbjct: 598 NNHTGTHILNFALKETLGNDIDQKGSLVASEKLRFDFS-YKKAVTGDELKNIEDTCNQQI 656
Query: 706 ANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISR 753
+QV + + + + + GE YPD V ++ + +++ S
Sbjct: 657 KENLQVFYKEIPLELAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANSANEEWTKYSI 716
Query: 754 EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
E C GTHV TG I+ ++ G+R I +TG
Sbjct: 717 EFCGGTHVNKTGDIKYFVILEESGIAKGIRRIVAVTG 753
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + PA R NSQKCIR GGKHNDL G+D
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFLGTVDPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K +A + LT+ +P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKIEAVTYSWTLLTE-VYGIPKDRLYVTY 141
>gi|308803402|ref|XP_003079014.1| SYA_ARATH Alanyl-tRNA synthetase, mitochondrial precursor (ISS)
[Ostreococcus tauri]
gi|116057467|emb|CAL51894.1| SYA_ARATH Alanyl-tRNA synthetase, mitochondrial precursor (ISS)
[Ostreococcus tauri]
Length = 1170
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 269/814 (33%), Positives = 403/814 (49%), Gaps = 96/814 (11%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
SK +R +F++YF Q HT SSP VP D ++ F N+GM Q+K +FLG A
Sbjct: 246 SKRVRDTFINYFIEKQNHTPWPSSPAVPVDDPTLLFANAGMNQYKPIFLGKADPKTALAK 305
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K +A A E LTK
Sbjct: 306 LSRATNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEAIGWAWELLTKV 365
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
LP DRLY TYFGG + GL D E + IWL+ +P + G NFWEMG GPC
Sbjct: 366 -YCLPEDRLYATYFGGDESQGLEPDLEAKAIWLKY-LPESRVMPFGCADNFWEMGDVGPC 423
Query: 189 GYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
G +EIHYD + G +S+L VN D + +EIWN+VFI + ++DTG+
Sbjct: 424 GPCTEIHYDRIGGRDASSL--VNMDDPNCLEIWNVVFIQY-------------THVDTGM 468
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +ILQNK S YDTD+F+P+ + I++++GA PY S+ + D +YR+++D+
Sbjct: 469 GFERLTSILQNKPSNYDTDVFMPIFKEIQRITGASPYTGLLGKSDVGEKDMAYRVVADHI 528
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R + +A+AD P + + LR V+R A+ + KQG +L + + LG V+
Sbjct: 529 RTLCIAIADGAAPGSDGRNYVLRRVLRRAVRFGREKLGAKQG-FFAQLVPIVVKQLGYVF 587
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ + I I+ EE F + + ++K ++
Sbjct: 588 PELIEKKKHIVEIIAEEETSFGRTLEKGIAQFKKVLDA---------------------- 625
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
A T ISG AF L+++YG ++++ +A TL +E F + E +E+S+
Sbjct: 626 ----ATKEGRTVISGPEAFLLWESYGFPNDLVELMAEEVGFTLDNEGFAKAFAEAQEKSR 681
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTF--PCLDTNLVGIVIGDQVFC 542
A + + L T D +S++Y P T+ V ++ F
Sbjct: 682 AGGKKSG---GVQLLFEAEATAWLQNNDVSTTNDSEKYAVGRPS-HTSTVAAILTPSGFV 737
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
+S A + G + + T YA +GGQ+ D G + NG
Sbjct: 738 ---------KSTADAEGP-------YGFVLNSTTFYAESGGQVADTGA-----ISTPNGS 776
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
V + ++ G ++H G V S V+ G + VD R M HT +H+LN ALR+V
Sbjct: 777 VSVEDVKVAAGFVLHTGEV--SGTVSVGEAATCAVDYERRENIMPNHTMTHVLNYALRKV 834
Query: 663 LT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
QK V ++ DFS+ + L+ +A +E +N+ I ++ VD+R + ++
Sbjct: 835 AGDGVDQKGSLVDEEKLRFDFSL-NKGLTTKQIADIEAVVNEQINAKLSVDKREVALAKA 893
Query: 722 PFLTHLTVIPGEIYPD-----------DVILID-ISDKENVISREPCCGTHVFNTGHIES 769
+ L + GE+YPD D +L D I++K S E C GTH+ T E
Sbjct: 894 MTINGLRAVFGEVYPDPVRVVSVGPSIDELLADPINEKWVNYSIEFCGGTHLQTTDFAEQ 953
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
V+ + G+R I T ++K A+ L
Sbjct: 954 FVVLEETGISKGIRRITAATRGTAKKAIARANEL 987
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K +FLG A R N+QKCIR GGKHNDL G+D
Sbjct: 272 VPVDDPTLLFANAGMNQYKPIFLGKADPKTALAKLSRATNTQKCIRAGGKHNDLDDVGKD 331
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K +A A E LTK LP DRLY T+
Sbjct: 332 TYHHTFFEMLGNWSFGDYFKEEAIGWAWELLTK-VYCLPEDRLYATY 377
>gi|254581276|ref|XP_002496623.1| ZYRO0D04378p [Zygosaccharomyces rouxii]
gi|238939515|emb|CAR27690.1| ZYRO0D04378p [Zygosaccharomyces rouxii]
Length = 956
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 270/829 (32%), Positives = 397/829 (47%), Gaps = 110/829 (13%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++R +FLD+F ++ H V SSP+VPY D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDREKWTATNVRKAFLDFF-KSKDHKFVASSPVVPYDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
P+ R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K+ A
Sbjct: 62 DPSSDFYHLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKQGAISY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
A E LTK LP DRLY TYF G + GL D E ++W +GV HI + NFW
Sbjct: 122 AWELLTKV-YGLPADRLYVTYFEGDPKNGLEADMEAFELWKSVGVDESHILPGNAEDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIH+D G ++A + VN D D++E+WN+VF+ R ++ PL
Sbjct: 181 EMGDQGPCGPCSEIHFDRIGGRNAA-SLVNMDDPDVLEVWNLVFMQFNREQDGSLKPLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFER+V+ILQ+ S YDTD+F PL I +V+G +PY F + +DT+Y
Sbjct: 240 KHIDTGMGFERVVSILQDYRSNYDTDVFTPLFARIHEVTGVRPYAGKFGAEDTDGIDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R + A+AD P+ + LR ++R + G L +
Sbjct: 300 RVLADHVRTLVFAIADGGVPNNEGRGYVLRRILRRGARFARKYMNYPIGDFFSRLVPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ D++PE+ + + IL EE F K L + + E++
Sbjct: 360 SQVQDIFPEVAKDPSYLFEILNEEEVSF----------AKTLDRGERLFEKY-------- 401
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
A + G + LYDTYG ++ + +A K LT+ FE+
Sbjct: 402 --------ADAATSSGKKTLDGLQVWRLYDTYGFPVDLTELMAEEKGLTIDGPGFEKAKQ 453
Query: 478 ELKERSKAKAAS--------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
E E SK NV +I ++ ++ P T D+YK Y +D+
Sbjct: 454 ESYEASKRGGKKDGAEVLKLNVHEISELNGENVPKTKDEYK-----------YGMENVDS 502
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQ----- 584
++ + G + ++ I E G+I DKT YA GGQ
Sbjct: 503 TILKLHDGTKF----------------VNEIS-EPGKKYGVILDKTCFYAEQGGQEYDTG 545
Query: 585 ---IDDIGVAYLTNTTQENGKV-EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
IDD+ + N NG V G L LEGK+ +++S+ D
Sbjct: 546 KLVIDDVAEFNVENVQLYNGFVFHTGSL--LEGKLSVGNKIIASY------------DEL 591
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R HT +H+LN ALR VL QK V ++ DFS + + ++ D + VE
Sbjct: 592 RRFPIKNNHTGTHILNFALREVLGNDIEQKGSLVAPEKLRFDFS-HKKGMAADEILKVED 650
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISDKE 748
N I + V + + ++ + + + GE YPD D +L + S++E
Sbjct: 651 ICNKQIKENMSVYYKDVPLTDAKSIYGVRAVFGETYPDPVRVVSVGKSVDDLLANPSNEE 710
Query: 749 -NVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
+ S E C GTHV TG I+ ++ G+R I +TG + A
Sbjct: 711 WSKYSVEFCGGTHVVKTGDIKVFVILEESGIAKGIRRIVAVTGSEAYEA 759
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+PY D ++ F N+GM Q+K +FLG + P+ R NSQKCIR GGKHNDL G+D
Sbjct: 36 VPYDDPTLLFANAGMNQYKPIFLGTVDPSSDFYHLKRAYNSQKCIRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K+ A A E LTK LP DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKQGAISYAWELLTK-VYGLPADRLYVTY 141
>gi|322712022|gb|EFZ03595.1| alanyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
Length = 952
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 257/843 (30%), Positives = 410/843 (48%), Gaps = 96/843 (11%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPA 67
S ++ S +R +F DY +GHT+V S +VPY D ++ F N+GM QFK +FLG
Sbjct: 2 SELKWPSALVRKAFFDYM-QQRGHTIVPSGSVVPYDDPTLLFTNAGMNQFKPIFLGTINQ 60
Query: 68 PYP-----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMAL 122
P R A++QK +R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A MA
Sbjct: 61 SDPMANLKRAADTQKVIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEMAW 120
Query: 123 EFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEM 182
E LTK L RLY TYF G+ + GLP D+E + +WL++G+P D I MK NFWEM
Sbjct: 121 EILTKV-YGLDPKRLYATYFEGNKELGLPPDDEAKQLWLDIGMPEDQIVPGDMKDNFWEM 179
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
G GPCG SSEIHYD G ++A VN D ++EIWN+VF+ R ++ PL +
Sbjct: 180 GDQGPCGPSSEIHYDKIGGRNAAHI-VNQDDPMVVEIWNLVFMQFDRQKDGSLKPLPAKH 238
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRM 302
IDTG+GFER+V+ LQ S Y TD F PL + I++V+G +PY + + +DT+YR+
Sbjct: 239 IDTGMGFERMVSALQETDSNYATDCFTPLFKQIQEVTGVRPYSDKYGKDDADGIDTAYRV 298
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI 359
++D+ R ++ A+ D P++ + +R ++R + + + G ++ +
Sbjct: 299 IADHIRTLSFAITDGAVPNSDGRGYVIRRILRRGVRYARKYLNAEIGSFFSKILPALVSH 358
Query: 360 LGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
+GD +PE+ I+ IL EE F + L + + + E+
Sbjct: 359 MGDQFPELVKKQLDIKEILDEEEEAFA----------RTLDRGEAQFEK----------- 397
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
A + ++ GD+ + LYDT+G ++ Q +A + L + +
Sbjct: 398 -----YAAKAAKAGVKKLDGDVVWRLYDTFGFPVDLTQIMAEERGLEIDESEVSVAKEKA 452
Query: 480 KERSKAKAAS-------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
+E SKA AS +V I +D + TDD K+ +
Sbjct: 453 REASKAVKASVDTFAKLDVHQIAQLDQQKVARTDDDAKF-------------------VK 493
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
G G D ++ + +L +G++ DKTN YA +GGQ+ D G
Sbjct: 494 GDSKGKVQLIFDGKTFHNS-------TKELPEKTAIGILLDKTNFYAESGGQVADTGRIV 546
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+ + + ++ ++ + G I+H G + ++ G E D R HT +
Sbjct: 547 IDDVVE----FKVMDVQNYGGFILHSG-YIEYGALSSGDEVICEYDELRRSPIRNNHTGT 601
Query: 653 HLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
H+LN +LR VL QK V +++ DFS + + ++ + +E N+ I ++
Sbjct: 602 HVLNHSLREVLGDDINQKGSLVDNEKLRFDFS-HKSQVKIEELRKIETLSNEYIRRNSKI 660
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGT 759
+ + + + + GE YP+ V ++ I + + ++P C GT
Sbjct: 661 FSKDVDLDLARQIEGVRAVFGETYPNPVRVVSIGMDVDTMLKDPKKQEWRQYSVEFCGGT 720
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNV-GNI 818
HV TG I+ ++ G+R I TG+++ AA FS+ L++ +
Sbjct: 721 HVEQTGLIKDLILVEESGIAKGIRRIIAYTGEAAHQVQRE------AAEFSKKLDILEAM 774
Query: 819 PYG 821
P+G
Sbjct: 775 PFG 777
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+PY D ++ F N+GM QFK +FLG P R A++QK IR GGKHNDL G+D
Sbjct: 33 VPYDDPTLLFTNAGMNQFKPIFLGTINQSDPMANLKRAADTQKVIRAGGKHNDLDDVGKD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A MA E LTK L RLY T+
Sbjct: 93 SYHHTFFEMLGNWSFGDYFKKEAIEMAWEILTK-VYGLDPKRLYATY 138
>gi|402086087|gb|EJT80985.1| alanyl-tRNA synthetase [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1085
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 264/848 (31%), Positives = 408/848 (48%), Gaps = 92/848 (10%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP 70
+ + ++R++FLD+F +GHT+V S +VP+ D ++ F N+GM QFK VFLG P
Sbjct: 129 KWSAAAVRTTFLDFF-QERGHTVVPSGSVVPHNDPTLLFTNAGMNQFKPVFLGTVGKTDP 187
Query: 71 -----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
R ++QKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A MA E L
Sbjct: 188 MASLKRAVDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIAMAWELL 247
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
TK L RLY TYF G+ GL D E +++WL GVP DHI MK NFWEMG
Sbjct: 248 TKV-YGLDATRLYVTYFEGNPAAGLEPDLEAKNLWLAAGVPEDHILPGNMKDNFWEMGDQ 306
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG SEIHYD G +A VN D ++E+WNIVFI R ++ L +IDT
Sbjct: 307 GPCGPCSEIHYDKIGGGRNAAHLVNQDDPLVVEVWNIVFIQFDRQQDRSLKSLPAKHIDT 366
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV LQ+KTS Y TD+F PL I++V+GA+ Y + + +DT+YR+++D
Sbjct: 367 GMGFERLVAALQDKTSNYGTDVFAPLFARIQEVTGARSYTDKYGKEDVDGIDTAYRVVAD 426
Query: 306 YSRMITVALADNMFP---DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R++ ++AD P +R V+R + + F + G ++ + E LG
Sbjct: 427 HIRLMAFSIADGAVPYNEGRGYVVRRVLRRGVRYARKYFNAEIGGFFSQILPTLVEQLGS 486
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE+ IQ IL EE F + L + + + E++ M
Sbjct: 487 GFPELVRKQQDIQEILDEEEEAFA----------RTLDRGEKQFEKYAAM---------- 526
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+++SG + LYDT+G +++ + +A + +T+ + +E
Sbjct: 527 ------TIKAGESKLSGSDVWRLYDTFGFPEDLTKLMAEERGITIDEAEVSVAREKAREA 580
Query: 483 SKA--KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV----GIVI 536
SK+ +A +D+ + K P D+ L I
Sbjct: 581 SKSIKEAVQTFAKLDVHRISEL----------------EKELKVPRPDSELKFSKDEITA 624
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
+ K I+ ++ +L +GL+ D+TN YA +GGQ+ D G +
Sbjct: 625 KVMLLFTGKDFIKSSK--------ELPPKTPLGLLLDRTNFYAESGGQVADTGRIIIDGV 676
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+ N + ++ G ++H G + ++T G E D R RL HT +H+LN
Sbjct: 677 AEFN----VLDVQEYGGYVLHNG-YLEFGELTAGDAVLCEYDERRRLPIRNNHTGTHILN 731
Query: 657 AALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
+LR VL QK V ++ DFS + +++ + +E N I + +
Sbjct: 732 HSLREVLGDEINQKGSLVDEEKLRFDFS-HKVAVTLPELRRIEDLANSYIRQNCKTYAKE 790
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFN 763
+ + + + GE YPD V ++ + + +++ P C GTHV
Sbjct: 791 VSLDLARQIEGVRAVFGETYPDPVRVVSVGIEVDMLLENPKNPEWRKVSVEFCGGTHVEQ 850
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQ-ILNVGNIPYGD 822
TG I+ ++ G+R I TGD++ A + A FS+ I + +P G
Sbjct: 851 TGVIKDMIIVEESGIAKGIRRIVAYTGDAAHQAQRD------AVKFSERITELEKLPLGP 904
Query: 823 DSIAFVNS 830
+ A + S
Sbjct: 905 EKEAAIKS 912
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK VFLG P R ++QKCIR GGKHNDL G+D
Sbjct: 157 VPHNDPTLLFTNAGMNQFKPVFLGTVGKTDPMASLKRAVDTQKCIRAGGKHNDLDDVGKD 216
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A MA E LTK L RLY T+
Sbjct: 217 SYHHTFFEMLGNWSFGDYFKKEAIAMAWELLTK-VYGLDATRLYVTY 262
>gi|350296965|gb|EGZ77942.1| cytosolic probable alanine--tRNA ligase [Neurospora tetrasperma
FGSC 2509]
Length = 961
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 272/844 (32%), Positives = 421/844 (49%), Gaps = 84/844 (9%)
Query: 16 SIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYP 70
+R +FLD+F +GH +V SS +VP+ D ++ F N+GM QFK +FLG A
Sbjct: 11 QVRKTFLDFFAE-RGHNVVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTIGKTEDMAQLK 69
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R ++QKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + E LTK
Sbjct: 70 RAVDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIAWSWELLTKV-Y 128
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
L RLY TYF GS GL D E +++WLE+GVP DHI MK NFWEMG GPCG
Sbjct: 129 GLDPQRLYVTYFEGSPDLGLEPDLEAKNLWLEVGVPEDHIIPGNMKDNFWEMGDQGPCGP 188
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIHYD G +A VN D ++E+WNIVFI R + ++ L +IDTG+GFE
Sbjct: 189 CSEIHYDKVGGGRNAAHLVNMDDPLVVEVWNIVFIQFDRQADKSLKSLPAKHIDTGMGFE 248
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV+ LQ+KTS Y TD+F PL I++V+GA+ Y + + +DT+YR+++D+ R++
Sbjct: 249 RLVSALQDKTSNYATDIFTPLFTKIQEVTGAREYTDKYGKDDVDGIDTAYRVIADHIRLL 308
Query: 311 TVALADNMFPDATA---KLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+ A+AD P+ +R V+R + + F + G ++ + E +G+ +PE+
Sbjct: 309 SFAIADGAAPNNVGRGYVVRRVLRRGVRYARKYFNAEIGTFFSKILPALVEQMGEQFPEL 368
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
I+ IL EE F AV L + + + E++ L +K K+
Sbjct: 369 VKKQTDIKEILDEEEVAF------AV----TLDRGEKQFEKY-------AALAIKSGEKK 411
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
L SG + LYDT+G +++ + +A + LT+ E ++NE +E+++ +A
Sbjct: 412 L---------SGADVWRLYDTFGFPEDLTKLMAEERGLTID----EAEVNEAREKAR-EA 457
Query: 488 ASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN-LVGIVIGD-QVFCIDK 545
+ V + ++ F + + N R P D L G G Q+ K
Sbjct: 458 SKAVKEA----VQEFAKLNVHQIAELETSLNIPR---PNSDAKFLKGDTKGKVQLIFNGK 510
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
++ ++ L +GL+ D TN YA +GGQ+ D G + + ++
Sbjct: 511 EFLKSSKD--------LPAKTPLGLLLDNTNFYAESGGQVADTGRIIIDGVAE----FKV 558
Query: 606 GELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTC 665
++ G IVH G + ++T G E D R HT +H+LN +LR VL
Sbjct: 559 LDVQEYGGYIVHNG-FLEYGELTEGDEVVCEYDELRRQPIRNNHTGTHILNHSLREVLGD 617
Query: 666 TY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFL 724
QK V D+ DFS + +S++ + +E N I ++ + + +
Sbjct: 618 EINQKGSLVDQDKLRFDFS-HKAAISLEDIKKIEDLSNHYIRQNLKAYSKDVDLDLAREI 676
Query: 725 THLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFNTGHIESCTV 772
+ + GE YP+ V ++ I + + + + P C GTHV NTG I+ +
Sbjct: 677 EGVRAVFGETYPNPVRVVSIGMEVDELLKNPKNPEWRKISVEFCGGTHVENTGLIKDLII 736
Query: 773 IGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILN-VGNIPYGDDSIAFVNSG 831
+ G+R I TG+ + A A F++ LN + + YG A + +
Sbjct: 737 VEESGIAKGIRRIVAYTGEGAHQAQRE------AQVFNEKLNHINALAYGPQKAAEIKAA 790
Query: 832 MCQF 835
+
Sbjct: 791 AVEL 794
Score = 119 bits (298), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG A R ++QKCIR GGKHNDL G+D
Sbjct: 34 VPHNDPTLLFTNAGMNQFKPIFLGTIGKTEDMAQLKRAVDTQKCIRAGGKHNDLDDVGKD 93
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK L RLY T+
Sbjct: 94 SYHHTFFEMLGNWSFGDYFKKEAIAWSWELLTK-VYGLDPQRLYVTY 139
>gi|302506663|ref|XP_003015288.1| hypothetical protein ARB_06411 [Arthroderma benhamiae CBS 112371]
gi|291178860|gb|EFE34648.1| hypothetical protein ARB_06411 [Arthroderma benhamiae CBS 112371]
Length = 954
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 277/834 (33%), Positives = 405/834 (48%), Gaps = 104/834 (12%)
Query: 4 PNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG 63
P V + +R +FLDYF GHT V SS +VP D ++ F N+GM Q+K++FLG
Sbjct: 10 PAGQQTVEWPALRVRDTFLDYF-KKNGHTFVPSSSVVPLSDPTLLFANAGMNQYKSIFLG 68
Query: 64 LTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDAC 118
A R NSQK DL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 69 TVDPNSDFAQLKRAHNSQK---------DLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAI 119
Query: 119 RMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCN 178
+ + E LTK L DRLY TYF G++ G+ D E RDIW +GV DHI MK N
Sbjct: 120 QFSWELLTKV-YGLDPDRLYVTYFEGNEAAGVGPDIEARDIWRSVGVKDDHILTGDMKDN 178
Query: 179 FWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
FWEMG GPCG SEIHYD G ++A VN D D++EIWN VFI + R ++ PL
Sbjct: 179 FWEMGDQGPCGPCSEIHYDRIGGRNAAHL-VNQDDPDVLEIWNNVFIQYNREPDRSLRPL 237
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
++DTGLG+ERLV+ILQNK+S YDTD+F PL I+ ++GA+PY F + +DT
Sbjct: 238 PNQHVDTGLGYERLVSILQNKSSNYDTDVFTPLFNAIQNITGARPYTGKFGAEDADGIDT 297
Query: 299 SYRMLSDYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYN 355
+YR+++D+ R +T A+ D P+ +R V+R + + +V+ G +L
Sbjct: 298 AYRVVADHLRTLTFAITDGAAPNNEGRGYVVRRVLRRGVRYARKYLQVEIGSFFSKLVPA 357
Query: 356 IAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
+ E +GD++PEI+ + IL EE F K L + + + E +
Sbjct: 358 LVEQMGDMFPEIKRKQTDVMEILDEEEVSFA----------KTLDRGERQFENY------ 401
Query: 416 GLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQK 475
Q A D ++ G + LYDT+G ++ + +A ++LT+ FE+
Sbjct: 402 ----------AQQALDSGAGKLHGADVWRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEA 451
Query: 476 LNELKERSK--AKAASN-----VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLD 528
+ KE SK AK AS+ V + ++ P TDD K+
Sbjct: 452 RLKAKEASKGQAKTASDLLKLTVHTLSTLEKNGVPKTDDDAKFGKG-------------- 497
Query: 529 TNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI 588
IV + C K I + + N +G+I DKTN YA GGQ D
Sbjct: 498 ----NIVANIKAICHGKEVIDSTKD--------IPANEQIGIILDKTNFYAEQGGQEYDT 545
Query: 589 GVAYLTNTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMR 647
G + + +++ + G ++H G + +F V + + E D R
Sbjct: 546 GKIVIDGQAE----LDVQNVQMYGGYVLHTGFIKYGNFSVNDSVIA--EYDELRRWPIRN 599
Query: 648 AHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIA 706
HT +H+LN ALR VL QK V +++ DFS + +S + +E D I
Sbjct: 600 NHTGTHILNFALREVLGDGIDQKGSLVAAEKLRFDFS-HKSAISDSDLEKIEAKSTDYIR 658
Query: 707 NQVQVDRRHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISD-KENVISRE 754
V + + + +T + + GE YPD D IL ++ D + +S E
Sbjct: 659 QNCAVYSQEVPLATAREITGVRAVFGETYPDPVRVVSVGVELDEILKNVKDPRWEGVSIE 718
Query: 755 PCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHLS 804
C GTHV TG I+ ++ G+R I +TG+ + + A E G+ L+
Sbjct: 719 FCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQRVAREFGERLN 772
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 64/107 (59%), Gaps = 15/107 (14%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R NSQK DL G+D
Sbjct: 45 VPLSDPTLLFANAGMNQYKSIFLGTVDPNSDFAQLKRAHNSQK---------DLDDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + + E LTK L DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAIQFSWELLTK-VYGLDPDRLYVTY 141
>gi|187469665|gb|AAI66719.1| Aars2 protein [Rattus norvegicus]
Length = 746
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 263/778 (33%), Positives = 391/778 (50%), Gaps = 100/778 (12%)
Query: 16 SIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYP 70
++R +FL +F + GH LV S+ + P GD S+ FVN+GM QFK +FLG A +
Sbjct: 35 AVRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFR 94
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN-DYYKRDACRMALEFLTKPP 129
RVANSQKCVR GG+HNDL GRD HHTFFEMLGNW+F +Y+K++AC MA E LT+
Sbjct: 95 RVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKKEACSMAWELLTQV- 153
Query: 130 VSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
+P DRL+ +YF G + GL D ETRDIWL LGVP + G++ NFWEMG TGPCG
Sbjct: 154 YGIPEDRLWVSYFSGDSKTGLDPDLETRDIWLSLGVPASRVLSFGLQENFWEMGDTGPCG 213
Query: 190 YSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
+EIHYD+ G L+E+WN+VF+ H R + ++ L + ++DTG+G
Sbjct: 214 PCTEIHYDLAG---------GMGPPQLVELWNLVFMQHYREADGSLHLLPQQHVDTGMGL 264
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERLV +LQ K STYDTDLF PLL+ I + PY ++ +DT+YR+++D+ R
Sbjct: 265 ERLVAVLQGKHSTYDTDLFSPLLDAIHQSCRVPPYSGRVGAADEGRIDTAYRVVADHIRT 324
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
++V +AD + P + LR ++R A+ S +V + G L + +A LG YPE
Sbjct: 325 LSVCIADGVSPGMSGAPLVLRRILRRAVRYSTEVLQAPPGFLGNLVPVVVA-TLGAAYPE 383
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+Q + KI ++ E+ F A+++ + ++ VK L
Sbjct: 384 LQKNSVKIANLVSEDEAAF----LASLQRGRRIIDRT-----------------VKRLGP 422
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ-KLNELKERSKA 485
D E++ + +L G+ +++Q + K + L EQ E + R++
Sbjct: 423 S---DLFPAEVA--WSLSLSGNLGIPLDLVQLMLEEKGVKLDTAGLEQLAQKEAQHRAQQ 477
Query: 486 KAAS-------NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
A+ +V ++ + + P TDD KY+Y N Y F + ++ +
Sbjct: 478 AEAAQEEGLCLDVHALEELHRQGIPTTDDSPKYNYSLRPNGD-YEFGLCEAQVLQL---- 532
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
++ +G ++ S+ GL+ D+TN YA GGQ D G YL T Q
Sbjct: 533 -----------YSETGTAVASVG--EGQRCGLLLDRTNFYAEQGGQASDRG--YLIRTGQ 577
Query: 599 ENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
++ + G I+H +V G ++ VD R+GCM HT +HLLN A
Sbjct: 578 QDVLFPVARAQVCGGFILHEAMAPECLQV--GDRVQLYVDKAWRMGCMVKHTATHLLNWA 635
Query: 659 LRRVLTCTYQKSCRVFSDECALDFSVYGET-LSVDSVAAVEKYINDVIANQVQVDRRHMR 717
LR+ L T ++ + E L F V +T L+ + + VE Y+ + + + +
Sbjct: 636 LRQTLGPTTEQRGSHLNPE-RLRFDVATQTPLTTEQLRTVESYVQEAVGQD-----KPVY 689
Query: 718 ASELPFLTHLTVIPG-----EIYPDDV-----------ILIDISDKENVISREPCCGT 759
E+P L H IPG E+YPD V L S S E CCGT
Sbjct: 690 MEEVP-LAHTARIPGLRSLDEVYPDPVRVVSVGVPVAQALAPASQAALQTSVELCCGT 746
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG A + RVANSQKC+R GG+HNDL GRD
Sbjct: 60 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDL 119
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K++AC MA E LT+ +P DRL+ ++
Sbjct: 120 SHHTFFEMLGNWAFGGEYFKKEACSMAWELLTQ-VYGIPEDRLWVSY 165
>gi|449283236|gb|EMC89917.1| putative alanyl-tRNA synthetase, mitochondrial, partial [Columba
livia]
Length = 909
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 260/784 (33%), Positives = 382/784 (48%), Gaps = 99/784 (12%)
Query: 57 FKNVFLGLTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFND 111
FK +FLG A + R NSQKCVR GGKHNDL GRD+YHHTFFEMLGNWSF D
Sbjct: 1 FKPIFLGTVHPRSELAQHRRGGNSQKCVRAGGKHNDLEDVGRDTYHHTFFEMLGNWSFGD 60
Query: 112 YYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIK 171
Y+K A MA E LT+ +P DRLY TYFGG GL DEE +D+WL LGVP H+
Sbjct: 61 YFK--ARHMAWELLTEV-YEIPRDRLYVTYFGGDSLLGLSADEECKDVWLRLGVPASHVL 117
Query: 172 KEGMKCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVS 231
+K NFWEMG TGPCG +EIHYD G +A A VN D++EIWN+VF+ + R
Sbjct: 118 PFPLKDNFWEMGDTGPCGPCTEIHYDHVGGGRNAAALVNKGSPDVVEIWNLVFMQYSREV 177
Query: 232 ADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTS 291
++PL ++++DTG+G ERLVT+LQNK S YDTDLF P+L+ I K G Y +
Sbjct: 178 EGNLLPLPQHHVDTGMGLERLVTVLQNKRSNYDTDLFTPILDAIHKGCGGPRYQGLVGDA 237
Query: 292 NRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKL 348
+ ++ +YR+++D+ R + V + D ++P + LR ++R A+ +V G L
Sbjct: 238 DVGCVNMAYRVVADHVRTLCVCITDGIYPGLSGAELVLRRILRRAVRFCSEVLHAPPG-L 296
Query: 349 VKELSYNIAEILGDVYPEIQDSINKIQLILGE-ESRIFDNLRKAAVKEWKPLVKTQPELE 407
+ L + E+LG+ YPE+ + ++I I+ E E+ +L +
Sbjct: 297 LASLVPTVVEVLGNAYPELTKNEDQIMDIINENEAAFLSSLER----------------- 339
Query: 408 QFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTL 467
G + + + + + T ++A++LY G ++I + K ++L
Sbjct: 340 ------------GRRIIERTVQQMEPSTNFPAEVAWSLYANLGFPLDLIDLMLEEKGISL 387
Query: 468 CHEAFEQKLNELKERSKAKAASNVPD-----IDLMDLKHF-----PVTDDKYKYDYHYDT 517
AF + E ER + D +D+ L P TDD KY Y
Sbjct: 388 DSAAFNELALEDAERKAGGPQAGQRDDTNTRLDVHSLAQLQSDNVPATDDSPKYAYRLGQ 447
Query: 518 NSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNL 577
+ + PC T L+ G S+ ++ G+I D+TN
Sbjct: 448 HGQYEFSPCQATILM------------------LYRGQSLQK-EVGSGQRCGVILDRTNF 488
Query: 578 YATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEV 637
YA GGQ D G Y+ Q++ + + G ++H V + + G ++ V
Sbjct: 489 YAEQGGQDSDQG--YMMRLGQQDILFPVESVQLCGGYVIHEVTAVETLRA--GDQVQLFV 544
Query: 638 DARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAA 696
D RL CM HT +HLLN A+R VL T Q+ V ++ DF G
Sbjct: 545 DEAKRLACMTNHTATHLLNFAIRHVLGDNTEQRGSHVTAERLRFDFDTKGPVTVEQLQQV 604
Query: 697 VEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPG-----EIYPDDVILIDIS-DKENV 750
+ + + N+V HM +E+P LT + G E YPD V ++ + E+V
Sbjct: 605 EQVVQDVIKQNEV----VHM--AEVP-LTLAREVQGLRAVDEGYPDPVRIVSLGVPVESV 657
Query: 751 ISR----------EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENG 800
++R E CCGTH+ TG +E T+I + G+ + +TG +K A E G
Sbjct: 658 LTRDSEAAMQTSVELCCGTHLLQTGAVEDLTIISERQLVKGISRVIAVTGGQAKQAREVG 717
Query: 801 KHLS 804
+ L+
Sbjct: 718 QCLA 721
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Query: 835 FKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEMLGNWSFND 889
FK +FLG A + R NSQKC+R GGKHNDL GRD+YHHTFFEMLGNWSF D
Sbjct: 1 FKPIFLGTVHPRSELAQHRRGGNSQKCVRAGGKHNDLEDVGRDTYHHTFFEMLGNWSFGD 60
Query: 890 YYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
Y+K A MA E LT+ +P DRLY T+
Sbjct: 61 YFK--ARHMAWELLTE-VYEIPRDRLYVTY 87
>gi|164427876|ref|XP_965697.2| alanyl-tRNA synthetase [Neurospora crassa OR74A]
gi|38567140|emb|CAE76435.1| probable alanine--tRNA ligase, cytosolic [Neurospora crassa]
gi|157071919|gb|EAA36461.2| alanyl-tRNA synthetase [Neurospora crassa OR74A]
gi|336464861|gb|EGO53101.1| hypothetical protein NEUTE1DRAFT_126487 [Neurospora tetrasperma
FGSC 2508]
Length = 961
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 272/844 (32%), Positives = 421/844 (49%), Gaps = 84/844 (9%)
Query: 16 SIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYP 70
+R +FLD+F +GH +V SS +VP+ D ++ F N+GM QFK +FLG A
Sbjct: 11 QVRKTFLDFFAE-RGHNVVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTIGKTEDMAQLK 69
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R ++QKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + E LTK
Sbjct: 70 RAVDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIAWSWELLTKV-Y 128
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
L RLY TYF GS GL D E +++WLE+GVP DHI MK NFWEMG GPCG
Sbjct: 129 GLDPQRLYVTYFEGSPDLGLEPDLEAKNLWLEVGVPEDHIIPGNMKDNFWEMGDQGPCGP 188
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIHYD G +A VN D ++E+WNIVFI R + ++ L +IDTG+GFE
Sbjct: 189 CSEIHYDKVGGGRNAAHLVNMDDPLVVEVWNIVFIQFDRQADKSLKSLPAKHIDTGMGFE 248
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV+ LQ+KTS Y TD+F PL I++V+GA+ Y + + +DT+YR+++D+ R++
Sbjct: 249 RLVSALQDKTSNYATDIFTPLFTKIQEVTGAREYTDKYGKDDVDGIDTAYRVIADHIRLL 308
Query: 311 TVALADNMFPDATA---KLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+ A+AD P+ +R V+R + + F + G ++ + E +G+ +PE+
Sbjct: 309 SFAIADGAAPNNVGRGYVVRRVLRRGVRYARKYFNAEIGTFFSKILPALVEQMGEQFPEL 368
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
I+ IL EE F AV L + + + E++ L +K K+
Sbjct: 369 VKKQTDIKEILDEEEVAF------AV----TLDRGEKQFEKY-------AALAIKSGEKK 411
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
L SG + LYDT+G +++ + +A + LT+ E ++NE +E+++ +A
Sbjct: 412 L---------SGADVWRLYDTFGFPEDLTKLMAEERGLTID----EAEVNEAREKAR-EA 457
Query: 488 ASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN-LVGIVIGD-QVFCIDK 545
+ V + ++ F + + N R P D L G G Q+ K
Sbjct: 458 SKAVKEA----VQEFAKLNVHQIAELETALNIPR---PNSDAKFLKGDTKGKVQLIFNGK 510
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
++ ++ L +GL+ D TN YA +GGQ+ D G + + ++
Sbjct: 511 EFLKSSKD--------LPAKTPLGLLLDNTNFYAESGGQVADTGRIIIDGVAE----FKV 558
Query: 606 GELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTC 665
++ G IVH G + ++T G E D R HT +H+LN +LR VL
Sbjct: 559 LDVQEYGGYIVHNG-FLEYGELTEGDEVVCEYDELRRQPIRNNHTGTHILNHSLREVLGD 617
Query: 666 TY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFL 724
QK V D+ DFS + +S++ + +E N I ++ + + +
Sbjct: 618 EINQKGSLVDQDKLRFDFS-HKAAISLEDIKKIEDLSNHYIRQNLKAYSKDVDLDLAREI 676
Query: 725 THLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFNTGHIESCTV 772
+ + GE YP+ V ++ I + + + + P C GTHV NTG I+ +
Sbjct: 677 EGVRAVFGETYPNPVRVVSIGMEVDELLKNPKNPEWRKISVEFCGGTHVENTGLIKDLII 736
Query: 773 IGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILN-VGNIPYGDDSIAFVNSG 831
+ G+R I TG+ + A A F++ LN + + YG A + +
Sbjct: 737 VEESGIAKGIRRIVAYTGEGAHQAQRE------AQVFNEKLNHINALAYGPQKAAEIKAA 790
Query: 832 MCQF 835
+
Sbjct: 791 AVEL 794
Score = 119 bits (298), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG A R ++QKCIR GGKHNDL G+D
Sbjct: 34 VPHNDPTLLFTNAGMNQFKPIFLGTIGKTEDMAQLKRAVDTQKCIRAGGKHNDLDDVGKD 93
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK L RLY T+
Sbjct: 94 SYHHTFFEMLGNWSFGDYFKKEAIAWSWELLTK-VYGLDPQRLYVTY 139
>gi|430812199|emb|CCJ30352.1| unnamed protein product [Pneumocystis jirovecii]
Length = 959
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 267/852 (31%), Positives = 417/852 (48%), Gaps = 107/852 (12%)
Query: 10 VRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPY 69
++ S +R +F+ YF + HT V S+ +VPY D ++ F N+GM Q+K++FLG T PY
Sbjct: 5 LKWPSHKVRETFISYF-KERDHTFVPSASVVPYNDPTLLFTNAGMNQYKSIFLG-TVDPY 62
Query: 70 ------PRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALE 123
R NSQK +R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + +
Sbjct: 63 SPLGKLKRAVNSQKVIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIAYSWD 122
Query: 124 FLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMG 183
LT+ LP + LY TYF G ++ + D ETRD+W+ +GV ++HI K NFWEMG
Sbjct: 123 LLTRI-YELPKNCLYVTYFQGDEENEILPDLETRDLWIAIGVDQNHILPGSKKDNFWEMG 181
Query: 184 STGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYI 243
GPCG +EIHYD G +A VN D D+IEIWN VFI + R +VPL ++
Sbjct: 182 DIGPCGPCTEIHYDRIG-GRNATNLVNKDDPDVIEIWNNVFIQYNREKNGKLVPLPSKHV 240
Query: 244 DTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRML 303
DTG+GFERLV+ILQNK+S YDTD+F PLL+ + +++G +PY F + +DT+YR++
Sbjct: 241 DTGMGFERLVSILQNKSSNYDTDIFYPLLKKVHEITGIRPYQGKFGDEDIDGIDTAYRVV 300
Query: 304 SDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL 360
D+ R + ++ D P+ + LR ++R + F G L+ + +
Sbjct: 301 VDHVRTLMFSICDGCIPNNDGRGYVLRRILRRGARYARKKFNYPIGNFFSSLAPTLINQM 360
Query: 361 GDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
+PE++ + + ++ EE+ L + G +
Sbjct: 361 VHAFPELEKGYSILDILDMEEASFAKTLDR-------------------------GEKMF 395
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
KYL + ++ + + G ++LY+TYG ++I +A K + + + F+ K
Sbjct: 396 DKYLQNAIVKNTKV--LPGKDVWSLYETYGFPIDLIDLIAKEKGMEIDQKGFKDTEIRSK 453
Query: 481 ERSKAKAASNVPDI--------DLMDLKHFPV--TDDKYKYDYHYDTNSKRYTFPCLDTN 530
E S+ +N+ + D + L+ V TDD +KY+ NSK
Sbjct: 454 EISRKSRGNNLESLKTIEINAHDFVKLQTMNVSHTDDSFKYNSG-TINSK---------- 502
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
V + +++F I+ + +I DKTN Y GGQ D+G
Sbjct: 503 -VKAIFYNKLFINSTENIKQGEQ--------------IIIILDKTNFYGEEGGQEGDVGK 547
Query: 591 AYLTNTTQENGKVE--IGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMR 647
L GK E + + G ++H G + F++ + E D R
Sbjct: 548 LVL------EGKAEFFVEDTQINAGYVLHIGYMKYGYFELNDEIICEYE-DIGRRKPIKN 600
Query: 648 AHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIA 706
HT +HLLN +LR++L +QK V S++ DFS Y +S+ +A +E ND I+
Sbjct: 601 NHTATHLLNFSLRKILGDDVHQKGSLVSSEKLRFDFS-YNFRISISDLAKIEDMCNDYIS 659
Query: 707 NQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP----------- 755
V + + + + + GE YPD V ++ + N + + P
Sbjct: 660 KDFTVYSKEINLDLAYKIFGVRAMFGETYPDPVRVLSVGVDLNEVIKSPTLSKWKDYSIE 719
Query: 756 -CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILN 814
C GTHV T I++ ++ S + G+R I LTG + +A L + FS+ L
Sbjct: 720 FCGGTHVSKTSDIKNFIIVEEGSISKGIRRIVALTGHEANSA------LRSTHDFSERLA 773
Query: 815 -VGNIPYGDDSI 825
+ ++P G + I
Sbjct: 774 CLKSMPAGPEKI 785
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 73/108 (67%), Gaps = 8/108 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPY------PRVANSQKCIRVGGKHNDLSFAGR 871
+PY D ++ F N+GM Q+K++FLG T PY R NSQK IR GGKHNDL G+
Sbjct: 34 VPYNDPTLLFTNAGMNQYKSIFLG-TVDPYSPLGKLKRAVNSQKVIRAGGKHNDLDDVGK 92
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
DSYHHTFFEMLGNWSF DY+K++A + + LT+ LP + LY T+
Sbjct: 93 DSYHHTFFEMLGNWSFGDYFKKEAIAYSWDLLTR-IYELPKNCLYVTY 139
>gi|281208624|gb|EFA82800.1| alanyl-tRNA synthetase [Polysphondylium pallidum PN500]
Length = 958
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 258/822 (31%), Positives = 407/822 (49%), Gaps = 95/822 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLT-----PAPYPR 71
IR +F+D+F N HT V SS +VP+ D ++ F N+GM QFK +FLG A R
Sbjct: 11 IRKTFIDFFVNKCEHTFVPSSQVVPHDDPTLLFANAGMNQFKPIFLGQADPRSEQAKLKR 70
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
ANSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF +Y+KR+A A E LT
Sbjct: 71 AANSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGNYFKREAITWAWELLTDV-YK 129
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +RLY +YFGG+ GL D E + IW E +P D + GMK NFWEMG TGPCG
Sbjct: 130 LDKERLYASYFGGAADKGLEPDLEAKSIWEEF-LPADRVLPFGMKENFWEMGDTGPCGPC 188
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIH+D + + A VNAD LIEIWN+VFI + R + ++ PL ++DTG+G ER
Sbjct: 189 SEIHFDKIEGRTGSQALVNADDPTLIEIWNLVFIQYNREADKSLRPLPNKHVDTGMGLER 248
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSG-AKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
+ +I+Q + YDTD+F P+ I+KV+G +PYG + +D +YR+++D+ R +
Sbjct: 249 VTSIIQKVGTNYDTDIFGPIFTEIQKVTGFTEPYGGKVGKDDPEQVDMAYRVIADHIRTL 308
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL----GDVYPE 366
T +LAD P + R V +L + ++ K + + +++ G+ +PE
Sbjct: 309 TFSLADGAIPSSDG--RGSVLRRILRRAIRYGKQKLKAPPGFFHRLVDVVVAHFGEFFPE 366
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
++ I ++ E ++F+ + E++ ++K GV
Sbjct: 367 LRSRPQHIISVIESEEKMFERTLDKGILEFENILKKTSN--------------GV----- 407
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
IS A L ++G ++ +A K + + + +E + + E S+ +
Sbjct: 408 ----------ISASHAHYLSSSFGFPIDLTTLMAEEKGVKVDLKGYEVLVEKFAEDSRRR 457
Query: 487 AASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+++L + + T+D+YKY+ + T + I G +
Sbjct: 458 QKEKKSELNLGAEPISILQKRSIQPTNDQYKYEQKE-----------VQTVVKAIWTGKE 506
Query: 540 VFCIDKHAIRHARSGASIDSIQLEH-NAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
+ ID + EH N VG+I + TN Y GGQI DIG ++
Sbjct: 507 L----------------IDQLTAEHKNTLVGVILESTNFYPEQGGQIYDIGNINFVDS-- 548
Query: 599 ENGKVEIGELASLEGKIVHFGNVVSSF-KVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+N + + G ++H G + K+ G VD R+ M HT++H++N
Sbjct: 549 QNTAFTVSDCKVFGGYVLHIGYISDDCDKLAVGDKVETTVDYTRRIPIMSNHTSTHMVNF 608
Query: 658 ALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR+VL T Q+ V + DFS + +S D + + +N++IA Q+ V + +
Sbjct: 609 ALRQVLGSTVDQRGSLVDNTRLRFDFSST-KGMSKDELVKTDAIVNELIAKQLNVYCKDV 667
Query: 717 RASELPFLTHLTVIPGEIYPD-----------DVILIDISDKENV-ISREPCCGTHVFNT 764
+ + L + GE+YPD + +L + S+ E S E C GTH+ N+
Sbjct: 668 ELASAKKIYGLRAVFGEVYPDPVRVVSVGVDVNDLLANPSNTEWANYSIEFCGGTHIANS 727
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTA 806
E T++ ++ + GVR + +TG + +N + L TA
Sbjct: 728 KEAELFTIVSEEAVSAGVRRLFAVTGTDASVVYDNNRKLETA 769
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLT-----PAPYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG A R ANSQKCIR GGKHNDL G+D
Sbjct: 34 VPHDDPTLLFANAGMNQFKPIFLGQADPRSEQAKLKRAANSQKCIRAGGKHNDLDDVGKD 93
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF +Y+KR+A A E LT L +RLY ++
Sbjct: 94 TYHHTFFEMLGNWSFGNYFKREAITWAWELLTD-VYKLDKERLYASY 139
>gi|358387653|gb|EHK25247.1| hypothetical protein TRIVIDRAFT_72371 [Trichoderma virens Gv29-8]
Length = 954
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 261/844 (30%), Positives = 412/844 (48%), Gaps = 95/844 (11%)
Query: 16 SIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP----- 70
+R +F D+F + HTLV S +VP+ D ++ F N+GM QFK +FLG P
Sbjct: 9 QVRKTFFDFF-EQRDHTLVPSGSVVPHNDPTLLFTNAGMNQFKPIFLGTVNKSDPMSNLK 67
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R ++QK +R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A MA E LTK
Sbjct: 68 RAVDTQKVIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEMAWELLTKV-Y 126
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
L RLY TYF G+ L D E ++ WL+ GVP DHI MK NFWEMG GPCG
Sbjct: 127 GLDPTRLYVTYFEGNPALNLEPDLEAKNFWLKTGVPEDHIIPGNMKDNFWEMGDQGPCGP 186
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SE+HYD G ++A + VN D ++EIWN+VF+ R ++ PL +IDTG+GFE
Sbjct: 187 CSEVHYDKIGGRNAA-SLVNMDDPMVVEIWNLVFMQFDRQKDGSLKPLPAKHIDTGMGFE 245
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV+ LQN S Y TD+F PL + IE+V+GA+PY + + +DT+YR+++D+ R +
Sbjct: 246 RLVSALQNTASNYATDVFTPLFKKIEEVTGARPYTDKYGQDDVDGIDTAYRVVADHIRTM 305
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+ A+ D P+ + +R ++R + + + G ++ + E +G+ +P++
Sbjct: 306 SFAITDGAVPNNDGRGYVIRRILRRGVRYARKYLNAEIGSFFSKILPALVEQMGEQFPDL 365
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
I+ IL EE F + L + + + E++ +
Sbjct: 366 AKKQGDIKEILDEEEEAFS----------RTLDRGEAQFERY---------------AAK 400
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
A+D ++ ++ GD+ + LYDT+G ++ + +A + L + + + +E SKA
Sbjct: 401 AAKD-NVKKLEGDVVWRLYDTFGFPVDLTKLMAEERGLDIDEDEVAVAREKAREASKAVK 459
Query: 488 AS-------NVPDIDLMDLK-HFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
S +V I +D + P T+D KY L G G
Sbjct: 460 DSVQTFAKLDVHKIAELDSELKVPRTNDDAKY-------------------LRGDSKGKV 500
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
+ D A +S I + N +G++ DKTN YA +GGQI D G + + +
Sbjct: 501 QYIFDGKAF--IKSTKDIPA-----NTAIGVLLDKTNFYAESGGQIADTGRIVIDDVVE- 552
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
++ ++ G ++H G + T E + R HT +H+LN +L
Sbjct: 553 ---FKVMDVQDFGGYVLHSGYIEYGVLSTDDEVI-CEYEELRRSPIRNNHTGTHILNHSL 608
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R VL QK V +D+ DFS + + +D + +E+ N I ++ + +
Sbjct: 609 REVLGDDVNQKGSLVDNDKLRFDFS-HKTQVKLDELKKIEELSNKYIRANSKIYSKEVEL 667
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDI--------SDKENVISR----EPCCGTHVFNTGH 766
+ L + GE YP+ V ++ I +D N R E C GTHV TG
Sbjct: 668 DLAIKIEGLRAVFGETYPNPVRVVSIGMDVDTMVADPTNAEWRKYSVEFCGGTHVDQTGL 727
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIPYGDDSIA 826
I+ ++ G+R I TG+++ + +++++ N+P+G + A
Sbjct: 728 IKDLIIVEESGIAKGIRRIIAYTGEAAHQVQREAQLFE-----QKLVDLENLPFGPEKEA 782
Query: 827 FVNS 830
V +
Sbjct: 783 QVKA 786
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P R ++QK IR GGKHNDL G+D
Sbjct: 32 VPHNDPTLLFTNAGMNQFKPIFLGTVNKSDPMSNLKRAVDTQKVIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A MA E LTK L RLY T+
Sbjct: 92 SYHHTFFEMLGNWSFGDYFKKEAIEMAWELLTK-VYGLDPTRLYVTY 137
>gi|194333146|ref|YP_002015006.1| alanyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
gi|194310964|gb|ACF45359.1| alanyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
Length = 885
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 272/805 (33%), Positives = 405/805 (50%), Gaps = 107/805 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR SFLDYF + +GH +V+S+P++P D ++ F N+GM QFK+VFL PY R
Sbjct: 1 MNSRDIRQSFLDYF-SAKGHKIVRSAPVIPAEDPTLLFTNAGMNQFKDVFLDKGSRPYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
++QKC+R GKHNDL GRD+YHHTFFEMLGNWSF DYYK++A A E LT
Sbjct: 60 AVDTQKCMRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKKEAIAWAWELLTD-VWK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP DRLY T + DEE+ IW E + DHI K G K NFWEMG TGPCG
Sbjct: 119 LPKDRLYATVY--------KDDEESFLIWQQETDIDPDHIMKFGDKDNFWEMGETGPCGP 170
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIH D+ + SS VNA +IE+WN+VFI + R++ ++ PL K ++DTG+GFE
Sbjct: 171 CSEIHIDLT-DDSSGAPLVNAGDYRVIELWNLVFIQYNRMADGSLDPLPKKHVDTGMGFE 229
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +LQ K S YDTD+F PL E I +V+G T+ S + D + R+++D++R +
Sbjct: 230 RVTAVLQGKRSNYDTDIFYPLFEAITEVTGV-----TYNASLDGEQDIAMRVIADHARAL 284
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVK---QGKLVKELSYNIAEILGDVYPEI 367
T A+ D P R V +L + K + ++ +L IA +GDV+PE+
Sbjct: 285 TFAITDGAMPGNEG--RGYVLRRILRRALRYARKLDSREPMIYKLVGVIARTMGDVFPEL 342
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
Q +Q I+ E F L +E F +TK
Sbjct: 343 QQQQETVQKIVKSEEESF-------------LSTLDRGMEIFG------------DITKA 377
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
+ D EI G+ AF LYDTYG ++ + +AA L + + F+ + E K R++
Sbjct: 378 VKADNG-KEIKGEDAFRLYDTYGFPIDLTRLMAAEVGLDIDEKGFDVCMQEQKTRAR--- 433
Query: 488 ASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHA 547
MD K + S+ + L+T + +G + D
Sbjct: 434 ---------MDRKEKQL------------AASETGEWLWLETPSPTVFVGYETLESDARI 472
Query: 548 IRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV----AYLTNT--TQENG 601
+ G + QL+ L+ D+T YA +GGQ D GV Y TQ++G
Sbjct: 473 V-----GVKVVGDQLQ------LVLDRTPFYAESGGQTGDRGVIEAEGYSVEVVDTQKDG 521
Query: 602 KVEIGELASLEGKIVHFGNVV--SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+ + A+++ + H G + ++ + + +V VD + RL R HT +HLL+AAL
Sbjct: 522 DMTVHIAATVQDR--HTGEQIDPAAIDFSASVAVQVSVDRQSRLATERNHTATHLLHAAL 579
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R+VL QK V D DFS + E +S + VE +N+ I ++ ++
Sbjct: 580 RKVLGKHVQQKGSLVGPDRLRFDFSHF-EKVSARELQLVEAEVNERIREAGEL----VKH 634
Query: 719 SELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
+++P+ L G+ Y D V ++++ +S E C GTHV N G I ++
Sbjct: 635 ADIPYEEALEKGALAFFGDKYADLVRVVEVPG----VSIELCGGTHVSNVGRIGLFKIVS 690
Query: 775 YKSYNHGVRSIKCLTGDSSKAAVEN 799
S G+R I+ LTG +++ + N
Sbjct: 691 ESSVAAGIRRIEALTGKAAEELLWN 715
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFL PY R ++QKC+R GKHNDL GRD+YHHT
Sbjct: 28 IPAEDPTLLFTNAGMNQFKDVFLDKGSRPYSRAVDTQKCMRASGKHNDLEDVGRDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK++A A E LT LP DRLY T
Sbjct: 88 FFEMLGNWSFGDYYKKEAIAWAWELLTD-VWKLPKDRLYAT 127
>gi|405975396|gb|EKC39962.1| Alanyl-tRNA synthetase, cytoplasmic [Crassostrea gigas]
Length = 920
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 276/800 (34%), Positives = 391/800 (48%), Gaps = 122/800 (15%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFL-----GLTPAP 68
S S+RS+FLD+FC H V SS I+ + F N+GM QFK +FL G +
Sbjct: 37 SASVRSTFLDFFCGKHEHLFVPSSSIIAKKGEGSYFTNAGMNQFKPIFLNDVGDGSPMSH 96
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
+ RVANSQKCVR+GGKHNDL G D HHTFFEMLG+WSF DY+KR+AC MALE L +
Sbjct: 97 HRRVANSQKCVRIGGKHNDLEDVGHDLTHHTFFEMLGSWSFGDYFKREACAMALELL-RD 155
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
+P+ LYFTYF G L D ETRD+WL LGV ++ + GM+ NFW+MG TGPC
Sbjct: 156 VYKIPMSSLYFTYFKGDSSLQLEEDLETRDLWLSLGVHKERVLPFGMRDNFWDMGVTGPC 215
Query: 189 GYSSEIHYDMKGEPSSALAR-VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
G +EIHYD + + VNA+ ++EIWN+VF+ + R ++VPL + ++DTGL
Sbjct: 216 GPCTEIHYDHHHSGNRLVPHLVNANSPQVVEIWNLVFMQYNRQLDQSLVPLLQRHVDTGL 275
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ERL LQN TS YDTDLF P+ + I K G Y + + D +YR+++D+
Sbjct: 276 GLERLTATLQNSTSNYDTDLFTPIFDAIHKDCGTPRYQGRVGSDDLGGRDMAYRVVADHI 335
Query: 308 RMITVALADNMFPDATAKLRNVVRDAL---LISEDVFKVKQGKLVKELSYNIAEILGDVY 364
RM+ V L++ + PD + + VR L L S V V G + L I + LG Y
Sbjct: 336 RMLCVCLSEGILPDRVDQHGHKVRLVLYRCLQSAKVLGVNPG-YISSLVDIIVDSLGGTY 394
Query: 365 PEIQDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
PE+ S +I+ +I E + L + FN K+
Sbjct: 395 PELNQSCKRIKDVINSSEDHYYHTLEQGT--------------NTFN-----------KF 429
Query: 424 LTKQLARDPSITEI-SGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L K+ P I+E+ SGD+ Y Y + I+ LA KL++ ++ +R
Sbjct: 430 LRKRKKTGP-ISELESGDLLSGHYG-YPVPMEILTSLAQQHKLSI----------QIPQR 477
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCL-DTNLVGIVIGDQVF 541
K T+ ++ FP L DT++VGI+
Sbjct: 478 GSEK-----------------------------QTDKQKAKFPDLPDTSVVGIL------ 502
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV------AYLTN 595
+ G S +S+Q A L DKT Y GGQI D G+ ++
Sbjct: 503 --------SRQCGESEESLQSGQEA--SLFLDKTCFYGECGGQIGDTGILQNETSVFVVT 552
Query: 596 TTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
TQ +GEL I H G V + LT+R+ D RLG MRAHT +HL
Sbjct: 553 DTQ-----RVGEL------IQHVGYVEKGEIRKGDKLTARINQDR--RLGNMRAHTATHL 599
Query: 655 LNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY---INDVIANQVQV 711
LN +LR++ + Q +V D L F V+ ++D+VA V + + +I + V
Sbjct: 600 LNWSLRKLTSDARQNGSQVGEDR--LYFEVF-TARAMDTVADVNQLQDGVRGLIGRGLPV 656
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
+ + SE L H+ + E+YP V ++ I +E S E C GTHV NT I
Sbjct: 657 SSQSLPLSEAQSLDHVVYLLNEVYPHTVNVVSIETEEESKSVELCGGTHVLNTQDIGDFC 716
Query: 772 VIGYKSYNHGVRSIKCLTGD 791
+ +K H +++ + D
Sbjct: 717 IEKFKGAQHNGNTLQKMMSD 736
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 69/98 (70%), Gaps = 6/98 (6%)
Query: 827 FVNSGMCQFKNVFL-----GLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
F N+GM QFK +FL G + + RVANSQKC+R+GGKHNDL G D HHTFFEM
Sbjct: 72 FTNAGMNQFKPIFLNDVGDGSPMSHHRRVANSQKCVRIGGKHNDLEDVGHDLTHHTFFEM 131
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
LG+WSF DY+KR+AC MALE L + +P+ LYFT+
Sbjct: 132 LGSWSFGDYFKREACAMALELL-RDVYKIPMSSLYFTY 168
>gi|326434145|gb|EGD79715.1| alanyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
Length = 955
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 260/812 (32%), Positives = 399/812 (49%), Gaps = 83/812 (10%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----AP 68
+ +R F+ YF +GH SS +P+ D ++ F N+GM Q+K FLG
Sbjct: 10 ADKVRGKFISYF-EERGHKFWPSSSTIPFNDPTLLFANAGMNQYKAKFLGTDSKDTDLGK 68
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K +A + + LT
Sbjct: 69 LTRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYWKEEAIDFSWDLLTNV 128
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
L +RLY TYF G +P DEETR +W++ VP + I K NFWEMG TGPC
Sbjct: 129 -FQLDPNRLYITYFEGDSV--VPADEETRSLWMK-HVPPERILPFDRKDNFWEMGETGPC 184
Query: 189 GYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
G +EIHYD + G +S L VN D D++EIWN+VF+ + + L ++DTG+
Sbjct: 185 GPCTEIHYDRIGGRDASHL--VNMDDPDVLEIWNLVFMQYNNEGNGVLKTLPAQHVDTGM 242
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ER++++LQNKTS YDTDLFLP+ I++ G + Y ++ +DT+YR+++D+
Sbjct: 243 GLERILSVLQNKTSNYDTDLFLPIFAAIKEKCGCREYTGKVNEADTDMVDTAYRVVADHI 302
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R + +A+AD PD + LR V+R A+ E+ + L + ++LGD +
Sbjct: 303 RTLCIAIADGGRPDKDGRGYILRLVLRRAIRFCEEYLGAPE-YFFASLVPVVVDVLGDAF 361
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ + +L EE R F L G +Y
Sbjct: 362 PELRKDPEETIAVLKEEERQFRRT----------------------------LSRGRRYF 393
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ +A I GD A+ L+DTYG ++ +A + L + + FE E S+
Sbjct: 394 KRAVAAVGEDGVIDGDTAWRLWDTYGFPIHLTIVMAEERGLKVDMDGFEAAKARAVEISR 453
Query: 485 AKAASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
A A+ ++DL + K P TDD KY Y D N Y+F + ++ ++
Sbjct: 454 AGGAAGETNLDLDVNTLDELKKKGVPGTDDAAKYAYTRDENGS-YSFSDAEGTVLALLT- 511
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
++ +D+ ++ S D +L VG++ DKTN YA GGQI D G +TT
Sbjct: 512 EEGGLVDRVSV-------SEDDEELP----VGVVLDKTNFYAEQGGQIYDTG--RFESTT 558
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSS-FKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
++++ + +H + KV LT + + D R CM HT +H+LN
Sbjct: 559 GAPLELDVFNVQKRGAYCLHVATLAQGELKVGDKLTLKFDHDRRR--PCMSNHTATHVLN 616
Query: 657 AALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL QK V + DF+ + ++ + + E+ +N ++ V +
Sbjct: 617 YALRSVLGEADQKGSLVEPERLRFDFTAK-KGMTPEQLKQTEEVVNKIVNANYTVYDKDT 675
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFNT 764
++ + L + GE YPD V ++ + + + +P C GTHV N+
Sbjct: 676 PLAQARAINGLRAMFGETYPDPVRVLSVGASIDDMVADPAASYAVDYSVEFCGGTHVKNS 735
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
G I T++ ++ G+R I +TG + A
Sbjct: 736 GDIGPFTILSEEAVAKGIRRIVAVTGQEALKA 767
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM Q+K FLG R NSQKCIR GGKHNDL G+D
Sbjct: 35 IPFNDPTLLFANAGMNQYKAKFLGTDSKDTDLGKLTRAVNSQKCIRAGGKHNDLDDVGKD 94
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K +A + + LT L +RLY T+
Sbjct: 95 VYHHTFFEMLGNWSFGDYWKEEAIDFSWDLLTN-VFQLDPNRLYITY 140
>gi|389637306|ref|XP_003716291.1| alanyl-tRNA synthetase [Magnaporthe oryzae 70-15]
gi|351642110|gb|EHA49972.1| alanyl-tRNA synthetase [Magnaporthe oryzae 70-15]
Length = 1084
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 269/860 (31%), Positives = 426/860 (49%), Gaps = 85/860 (9%)
Query: 5 NISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGL 64
N+++ V+ ++++R +FL+YF +GHT+V SS +VP+ D ++ F N+GM QFK +FLG
Sbjct: 123 NMATEVKWTAETVRKTFLNYF-EERGHTVVPSSSVVPHSDPTLLFTNAGMNQFKPIFLGT 181
Query: 65 TPAPYP-----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACR 119
P R +SQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 182 IGKTDPMAGLKRAVDSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIS 241
Query: 120 MALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNF 179
M+ E LTK L RLY TYF G+ + GL D E +++WLE GVP DHI MK NF
Sbjct: 242 MSWELLTKV-YGLDPARLYVTYFEGNPEMGLEPDLEAKNLWLENGVPEDHILPGNMKDNF 300
Query: 180 WEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLS 239
WEMG GPCG SEIHYD G ++A VN D ++E+WN VFI R ++ L
Sbjct: 301 WEMGDQGPCGPCSEIHYDKVGGRNAAHL-VNMDDPLVVEVWNNVFIQFDRQQDKSLKSLP 359
Query: 240 KNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTS 299
++DTG+GFERLV+ LQNKTS Y TD+F PL I++V+GA+ Y + + +DT+
Sbjct: 360 AKHVDTGMGFERLVSALQNKTSNYATDVFSPLFARIQEVTGAREYTDKYGKDDADGIDTA 419
Query: 300 YRMLSDYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNI 356
YR+++D+ R++ ++AD P+ +R V+R + + F + G ++ +
Sbjct: 420 YRVVADHIRLMAFSIADGAVPNNDGRGYVVRRVLRRGVRYARKYFNAEIGGFFSQILPTL 479
Query: 357 AEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
E +G+ +PE+ I+ IL EE F + L + + + E++ M
Sbjct: 480 VEHMGEQFPELGQKQQDIKEILDEEEEAFA----------RTLDRGEKQFEKYASM---- 525
Query: 417 LVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKL 476
A ++SG + LYDT+G +++ + +A + +T+
Sbjct: 526 ------------AIKAGENKLSGSDVWRLYDTFGFPEDLTKLMAEERGITIDEAEVSVAR 573
Query: 477 NELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ +E SKA S V +D+ +++ K D+ +K Y + + + I
Sbjct: 574 EKAREASKAVKES-VQTFAKLDVHRISELENELKVT-RTDSEAK-YLKGDITSKVYLIYT 630
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
G K ++ +GLI DKTN YA +GGQI D G +
Sbjct: 631 GKDFLKSSK---------------EIPPKTPLGLILDKTNFYAESGGQIADTGRIVI--- 672
Query: 597 TQENGKVEIGELASLE--GKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+G E L + E G ++H G + ++T G + E D R HT +H+
Sbjct: 673 ---DGVAEFKVLDTQEFGGYVLHNG-YLEYGELTAGDSVICEYDELRRQPIRNNHTGTHI 728
Query: 655 LNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN +LR VL QK V +++ DFS + ++V + +E N I +
Sbjct: 729 LNHSLREVLGDDINQKGSLVDNEKLRFDFS-HKTGVTVPELKKIEDLSNAYIRQNCKTFT 787
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHV 761
+ + + + + GE YP+ V ++ I + +++ P C GTHV
Sbjct: 788 KDVDLDLAKQIEGVRAVFGETYPNPVRVVSIGIEVDMLLENPKNPEWRKVSVEFCGGTHV 847
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQ-ILNVGNIPY 820
TG ++ ++ G+R I TGD++ AA FS+ I + ++P+
Sbjct: 848 DQTGIMKDMIIVEESGIAKGIRRIVAYTGDAAHQVQR------LAADFSKRIDELESLPF 901
Query: 821 GDDSIAFVNSGMCQFKNVFL 840
G + A + + + + +
Sbjct: 902 GTEKEAAIKTTQVDLEQLVI 921
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P R +SQKCIR GGKHNDL G+D
Sbjct: 157 VPHSDPTLLFTNAGMNQFKPIFLGTIGKTDPMAGLKRAVDSQKCIRAGGKHNDLDDVGKD 216
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A M+ E LTK L RLY T+
Sbjct: 217 SYHHTFFEMLGNWSFGDYFKKEAISMSWELLTK-VYGLDPARLYVTY 262
>gi|409044874|gb|EKM54355.1| hypothetical protein PHACADRAFT_258158 [Phanerochaete carnosa
HHB-10118-sp]
Length = 951
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 262/806 (32%), Positives = 395/806 (49%), Gaps = 82/806 (10%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
S +R F +F + + HT V SS +PY D ++ F N+GM QFK +FLG T P+ +
Sbjct: 6 SSTRVREEFFKFFRDRE-HTFVPSSSTIPYEDPTLLFANAGMNQFKPIFLG-TVDPHSEL 63
Query: 73 A------NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + + LT
Sbjct: 64 AKLNRAFNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAIGYSWKLLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ L DRLY TYF G + GL D E R +WL+ GVP DH+ K NFWEMG+TG
Sbjct: 124 EV-YGLSKDRLYVTYFEGDSKNGLEPDLEARQLWLDQGVPEDHVLPGNAKDNFWEMGATG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SE+HYD+ G + A VN D ++EIWN VF+ R ++ PL ++DTG
Sbjct: 183 PCGPCSEVHYDLVGGRNVAHL-VNQDDPLVVEIWNNVFMQFNREDDGSLKPLPAKHVDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFER+VT +Q K S YDTD+F P+ I++++G +PY F + +DT+YR+ +D+
Sbjct: 242 MGFERIVTAVQGKISNYDTDVFSPIFARIQELTGVRPYQGKFGAEDTDGIDTAYRVCADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R +T A++D P+ + LR ++R + G L + E +G V
Sbjct: 302 VRTLTFAISDGGVPNNVGRGYVLRRILRRGSRYARKKLGAPIGSFFSSLIPVVVEQMGGV 361
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE+ +++++ IL EE E F+ + G L +Y
Sbjct: 362 FPELTKRVDEVKEILDEEE------------------------ESFSRTLDRGEKLFDQY 397
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
+ K A++ T++SG + LYDTYG ++ + +A + T+ E FE + KE S
Sbjct: 398 VQK--AQERGETKLSGKDVWRLYDTYGFPVDLTRLMAEELRFTVDEEEFELAQAQSKEAS 455
Query: 484 KA--KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
KA K +D+ D+ K D S ++ +D+ + + ++ F
Sbjct: 456 KAIKKINKETVKLDVHDIAALEKNISVPKTD-----ESAKFLRGSIDSRVAALYY-NKTF 509
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
AS + Q+ NA G++ DKT+ YA +GGQ D G + +
Sbjct: 510 P------------ASTE--QIPENALFGVLLDKTSFYAESGGQEHDTGSIVVDGVAE--- 552
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMR-AHTTSHLLNAALR 660
E+ ++ G ++H G + + V + +R +R HT +H+LN +LR
Sbjct: 553 -FEVSDVQVYNGYVLHIGQL--KYGALSIGNQVVSIYDELRRWPLRNNHTATHVLNYSLR 609
Query: 661 RVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
L QK V + DFS + + + +E D I V+V + +
Sbjct: 610 EALGDHIDQKGSLVAPTKLRFDFS-HKAQIPAPELERIESMSQDWIRRNVKVFGKEVDLK 668
Query: 720 ELPFLTHLTVIPGEIYPD-----------DVILIDISD-KENVISREPCCGTHVFNTGHI 767
+ L + GE YPD D I+ DI + K S E C GTHV TG I
Sbjct: 669 LAQKIPGLRAVFGESYPDPVRVVSLEYDVDEIVQDIENPKWRSTSVEFCGGTHVNKTGEI 728
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSS 793
+ + G+R I +TG+ +
Sbjct: 729 KDFVITEESGIAKGIRRIVAVTGNEA 754
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 74/108 (68%), Gaps = 8/108 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA------NSQKCIRVGGKHNDLSFAGR 871
IPY D ++ F N+GM QFK +FLG T P+ +A NSQKCIR GGKHNDL G+
Sbjct: 32 IPYEDPTLLFANAGMNQFKPIFLG-TVDPHSELAKLNRAFNSQKCIRAGGKHNDLEDVGK 90
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
DSYHHTFFEMLGNWSF DY+K++A + + LT+ L DRLY T+
Sbjct: 91 DSYHHTFFEMLGNWSFGDYFKKEAIGYSWKLLTE-VYGLSKDRLYVTY 137
>gi|429849495|gb|ELA24879.1| alanyl-trna synthetase [Colletotrichum gloeosporioides Nara gc5]
Length = 955
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 266/820 (32%), Positives = 414/820 (50%), Gaps = 94/820 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----R 71
+R +F D+F +GHT+V SS +VP+ D ++ F N+GM QFK +FLG P R
Sbjct: 11 VRKTFFDFF-ERRGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTISKADPMYTLKR 69
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A+SQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A M+ E LTK
Sbjct: 70 AADSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEMSWELLTKV-YG 128
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L RLY TYF G+ GL D E +++WL +GVP DHI MK NFWEMG GPCG
Sbjct: 129 LDPARLYVTYFEGNPAMGLEPDLEAKNLWLSVGVPEDHILPGNMKDNFWEMGDQGPCGPC 188
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIHYD G ++A + VN D ++E+WN VFI R + ++ L ++DTG+GFER
Sbjct: 189 SEIHYDKIGGRNAA-SLVNMDDPMVVEVWNNVFIQFDRQADKSLKSLPAKHVDTGMGFER 247
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV+ LQN S Y TD+F PL + IE+V+GA+PY + + +DT+YR+++D+ R++T
Sbjct: 248 LVSALQNTVSNYATDIFTPLFKRIEEVTGARPYTDKYGADDIDGIDTAYRVIADHIRLLT 307
Query: 312 VALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
+++D P+ +R V+R + + F + G ++ + E +G+ +PEI
Sbjct: 308 FSMSDGAVPNNDGRGYVVRRVLRRGVRYARKYFNAEIGSFFSKILPALVEQMGEQFPEIV 367
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
I+ IL EE F + L + + + E KY + L
Sbjct: 368 KKQQDIKEILDEEEEAFA----------RTLDRGEAQFE--------------KYAKEAL 403
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAA 488
+ ++SG + + LYDT+G ++ + +A ++L + + ++ + +E SK +
Sbjct: 404 KKGEK--KLSGAVVWRLYDTFGFPVDLTKLMAEERQLEIDEDEVKEAQEKAREASKVVKS 461
Query: 489 S-------NVPDIDLMDLK-HFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
+ NV I ++ + + TDD+ K+ D SK QV
Sbjct: 462 AVQTFAKLNVHQIAELEKELNVARTDDEAKFG-KGDAKSKV-----------------QV 503
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
K ++ + L +GL+ DKTN YA +GGQ+ D G + + +
Sbjct: 504 IYDGKGFVKSTKD--------LAEKTPLGLLLDKTNFYAESGGQVADTGRIVIDDVAE-- 553
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
++ ++ + G IVH G + ++ G E D R HT +H+LN +LR
Sbjct: 554 --FKVLDVQNFGGYIVHNG-YLEYGALSSGDEVICEYDELRRSPIRNNHTGTHVLNHSLR 610
Query: 661 RVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
VL QK V +++ DFS + +++ + +E++ N I +V + +
Sbjct: 611 EVLGDDINQKGSLVDNEKLRFDFS-HKTGVTIPELKKIEEFSNTYIKQNGKVYAKEVDLD 669
Query: 720 ELPFLTHLTVIPGEIYPD-----------DVILIDISDKE-NVISREPCCGTHVFNTGHI 767
+ + + GE YP+ D +L + + E S E C GTHV +TG I
Sbjct: 670 LARGIEGVRAVFGETYPNPVRVVSVGVDVDTMLANPKNPEWRKYSVEFCGGTHVESTGLI 729
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHL 803
+ ++ G+R I TGD++ + AVE K L
Sbjct: 730 KDLVIVEESGIAKGIRRIIAYTGDAAHQVQREAVEFSKKL 769
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P R A+SQKCIR GGKHNDL G+D
Sbjct: 33 VPHNDPTLLFTNAGMNQFKPIFLGTISKADPMYTLKRAADSQKCIRAGGKHNDLDDVGKD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A M+ E LTK L RLY T+
Sbjct: 93 SYHHTFFEMLGNWSFGDYFKKEAIEMSWELLTK-VYGLDPARLYVTY 138
>gi|334366287|ref|ZP_08515223.1| alanine--tRNA ligase [Alistipes sp. HGB5]
gi|313157475|gb|EFR56894.1| alanine--tRNA ligase [Alistipes sp. HGB5]
Length = 873
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 260/792 (32%), Positives = 392/792 (49%), Gaps = 96/792 (12%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
S IR +FLD+F ++GH +V S+P+V GD ++ F N+GM QFK++FLG P YPR A
Sbjct: 3 SNKIRRAFLDFF-ESKGHVIVPSAPMVVKGDPTLMFTNAGMNQFKDIFLGNAPRKYPRAA 61
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
++QKC+RV GKHNDL G D+YHHT FEMLGNWS+ DY+K++A A E L LP
Sbjct: 62 DTQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSYGDYFKKEAIEWAWELLGG-VYKLP 120
Query: 134 LDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSE 193
DR+Y T F GS++ G+P D+E D W + +P DHI + NFWEMG TGPCG SE
Sbjct: 121 ADRMYATVFEGSEEDGVPFDQEAYDYWKQF-LPEDHIIRGNKHDNFWEMGETGPCGPCSE 179
Query: 194 IHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
IH+D++ E A VNA +IEIWN+VF+ R + ++ PL +DTG+GF
Sbjct: 180 IHFDLRDEAEIAAKPGREMVNAGHPQVIEIWNLVFMQFNRKANGSLEPLPARNVDTGMGF 239
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERL ILQ K S YDTD+F P ++ I ++SG K YG D + R+++D+ R
Sbjct: 240 ERLCMILQGKKSNYDTDVFQPTIQRISQLSG-KAYGAD------AKCDVAMRVIADHLRA 292
Query: 310 ITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
I ++AD P A +R ++R A+ + + K L + E +G+ +PE
Sbjct: 293 IAFSIADGQLPSNVKAGYVIRRILRRAVRYGYTYLGFTEPTICK-LVPGLVEQMGEQFPE 351
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
++ + I+ ++ EE F LR A N+++ GV TK
Sbjct: 352 LKAQQSLIEKVIEEEEASF--LRTLATG--------------INLLD------GVIEKTK 389
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
R+ ISG AF LYDT+G ++ + +A + + + AFE +L KERS+
Sbjct: 390 GEGREL----ISGKDAFELYDTFGFPIDLTELIAREQGVGVDLAAFETELQAQKERSRNA 445
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
AA + D ++ FP+ + + YDT +++
Sbjct: 446 AAVDTDDW----VELFPIRESLFT---GYDTLTEQ------------------------- 473
Query: 547 AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIG 606
+R AR + + L+FD+T Y +GGQI DIG Y+ N + ++ +
Sbjct: 474 -VRIARYRRVTSKGKTSYQ----LVFDRTPFYGNSGGQIGDIG--YIENADE---RIAVV 523
Query: 607 ELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TC 665
G I+H +V P VDA R HT +HL++ ALR+VL
Sbjct: 524 ATEKENGLIIH---IVKELPENPAAGFTAVVDAAKRQSAANNHTATHLMHEALRKVLGQH 580
Query: 666 TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLT 725
QK V + DFS + + ++ + VE +N + ++ E
Sbjct: 581 VEQKGSMVTPEVLRFDFSHF-QKMTPQELREVEMLVNRAVRANYPLEENREATKEEAEKC 639
Query: 726 HLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSI 785
++ GE Y D V ++ S E C GTH TG+I ++ + + GVR I
Sbjct: 640 GAMMLFGEKYGDKVRMVRFGS-----SVELCGGTHTSATGNIGFFKILNESAISAGVRRI 694
Query: 786 KCLTGDSSKAAV 797
+ +TG+ ++ +
Sbjct: 695 EAVTGERAEQII 706
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++FLG P YPR A++QKC+RV GKHNDL G D+YHHT FE
Sbjct: 31 GDPTLMFTNAGMNQFKDIFLGNAPRKYPRAADTQKCLRVSGKHNDLEEVGHDTYHHTMFE 90
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWS+ DY+K++A A E L LP DR+Y T
Sbjct: 91 MLGNWSYGDYFKKEAIEWAWELLGG-VYKLPADRMYAT 127
>gi|401422240|ref|XP_003875608.1| putative alanyl-tRNA synthetase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491846|emb|CBZ27119.1| putative alanyl-tRNA synthetase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 962
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 274/870 (31%), Positives = 411/870 (47%), Gaps = 111/870 (12%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPA 67
S+ +R F+DYF QGHT V SP+ P+ D ++ F+N+GM QFK +FLG T
Sbjct: 2 SFTEWPVSRVRQEFVDYF-KKQGHTFVPGSPVCPHDDPTLLFINAGMNQFKALFLG-TAD 59
Query: 68 P------YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMA 121
P R ANSQ C+R GGKHNDL GRD+YHHTFFEMLG+WSF DY+K++A + A
Sbjct: 60 PNTDFGRLKRAANSQMCIRAGGKHNDLEDVGRDTYHHTFFEMLGSWSFGDYFKKEAIQWA 119
Query: 122 LEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWE 181
E LT+ LP D+LY TYF G GL D E +++W + +P I K NFWE
Sbjct: 120 WELLTEV-YKLPKDQLYVTYFEGDKNNGLNPDLEAKELWAQF-LPESQIVPGNAKDNFWE 177
Query: 182 MGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
MG TGPCG SE+H+D G ++A + VN D ++EIWN+VF+ +R + + PL +
Sbjct: 178 MGDTGPCGPCSEVHFDRIGGRNAA-SFVNKDDPMVVEIWNLVFMQFERRADGFLTPLPQK 236
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
+IDTG+G ERL +ILQ S YDTD ++PL E I+ +G + +D +YR
Sbjct: 237 HIDTGMGLERLTSILQGVKSNYDTDAWIPLFEAIQTATGYPKSYAEIRNNPDSDALVAYR 296
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAE 358
+++D+ R +T A+ D + PD+ + LR ++R A+ K G +L ++
Sbjct: 297 VVADHIRCLTSAVGDGVMPDSVGRGFVLRRIIRRAVRYGVQFLGAKPG-FFTQLVDSVCT 355
Query: 359 ILGDVYPEIQD--SINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
LG +P +++ +I +I+ +L +E + F K W+
Sbjct: 356 SLGPFFPHLKEPRNIQRIKAVLADEEQSF-------AKTWE------------------- 389
Query: 417 LVLGVKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
+G+++ + R + ISG AF L+D YG ++ LA +T+ E F
Sbjct: 390 --MGLRHFNHAVNECRANNSKVISGSEAFVLHDRYGFPVDLTCLLAEKDGMTVDLEGFNA 447
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHF-----PVTDDKYKYDYHYDTNSKRYTFPCLDT 529
++ E K S + A+ ID L+ P TDD KY + T
Sbjct: 448 EMKESK-VSAGRVAATKTFIDAYQLEELKTRGIPQTDDVAKYVWEDST------------ 494
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
GD + DK + + + E VG+I + TN YA +GGQ+ D G
Sbjct: 495 -------GDVLAIFDKKNSKFISLLEPGNDLGAEG---VGIILNTTNFYAESGGQVYDTG 544
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVV--SSFKVTPGLTSRVEVDARMRLGCMR 647
+ E+ ++ ++ G +VH G++ S+ + +++VD RL
Sbjct: 545 RL----VAGSDSVFEVKKVYNVAGYVVHVGSLSKDSASPIPLSAVVQMQVDYERRLPIAA 600
Query: 648 AHTTSHLLNAALRRVL-------TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
HTT+H LN LRRVL T QK V + DFS Y LS + + VE+
Sbjct: 601 NHTTTHQLNWVLRRVLGEKPDNFTEVQQKGSLVTDEMLRFDFS-YSTKLSNEELVRVEQL 659
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP----- 755
+N+ I + V R + + L + GE YPD V +I I N + P
Sbjct: 660 LNEKIQAGLPVYREEVPLEAASKINGLRQMFGEKYPDPVSVISIGTPINEMLTNPEKEEW 719
Query: 756 -------CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL----- 803
C GTH+ N + +I ++ GVR + T + ++ G L
Sbjct: 720 RDYAVEFCGGTHLKNLKEADKAVIISEEALMKGVRRVVVATKSEADKVIKAGTELKGQYD 779
Query: 804 -----STAASFSQILNVGNIPYGDDSIAFV 828
A+ + L+V N GD I V
Sbjct: 780 ELMQKEATATSVKALSVLNKKVGDSCIPLV 809
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 8/107 (7%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTPAP------YPRVANSQKCIRVGGKHNDLSFAGRD 872
P+ D ++ F+N+GM QFK +FLG T P R ANSQ CIR GGKHNDL GRD
Sbjct: 34 PHDDPTLLFINAGMNQFKALFLG-TADPNTDFGRLKRAANSQMCIRAGGKHNDLEDVGRD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLG+WSF DY+K++A + A E LT+ LP D+LY T+
Sbjct: 93 TYHHTFFEMLGSWSFGDYFKKEAIQWAWELLTE-VYKLPKDQLYVTY 138
>gi|358390987|gb|EHK40392.1| hypothetical protein TRIATDRAFT_153342 [Trichoderma atroviride IMI
206040]
Length = 954
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 263/853 (30%), Positives = 417/853 (48%), Gaps = 113/853 (13%)
Query: 16 SIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP----- 70
+R +F D+F +GHTLV S +VP+ D ++ F N+GM QFK +FLG P
Sbjct: 9 QVRKTFFDFF-EQRGHTLVPSGSVVPHNDPTLLFTNAGMNQFKPIFLGTVNKSDPMSSLK 67
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R ++QK +R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K+DA MA E LTK
Sbjct: 68 RAVDTQKVIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKDAIEMAWELLTKV-Y 126
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
L RLY TYF G+ GL D E +++W + GVP DHI MK NFWEMG GPCG
Sbjct: 127 GLDPSRLYVTYFEGNPALGLEPDLEAKELWQKTGVPEDHIIPGNMKDNFWEMGDQGPCGP 186
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SE+HYD G ++A + VN D ++EIWN+VF+ R ++ PL +IDTG+GFE
Sbjct: 187 CSEVHYDKIGGRNAA-SLVNMDDPMVVEIWNLVFMQFDRQKDGSLKPLPAKHIDTGMGFE 245
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV+ LQ+ S Y TD+F PL + I++V+GA+ Y + + +DT+YR+++D+ R +
Sbjct: 246 RLVSALQDTASNYATDVFTPLFKKIQEVTGARLYTDKYGAEDTDGIDTAYRVVADHIRTM 305
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+ A+ D P+ + +R ++R + + + G ++ + +G+ +P++
Sbjct: 306 SFAITDGAVPNNDGRGYVIRRILRRGVRYARKYLNAEIGSFFSKILPALVAQMGEQFPDL 365
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
IQ IL EE F + L + + + E++ +
Sbjct: 366 AKKQLDIQEILDEEEEAFS----------RTLDRGEAQFERY---------------AAK 400
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
A+D + ++ GD+ + LYDT+G ++ + +A + L + + +E SKA
Sbjct: 401 AAKD-GVKKLDGDVVWRLYDTFGFPVDLTKLMAEERGLDIDEAEVAVAREKAREASKAVK 459
Query: 488 AS-------NVPDIDLMDLK-HFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
S +V I +D + P T+D KY D+ SK V + +
Sbjct: 460 DSVQTFAKLDVHQIAELDTQLKVPRTNDDAKY-LKGDSKSK-----------VQYIFDGK 507
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
F +S I N +GL+ DKTN YA +GGQI D G + + +
Sbjct: 508 TFT---------KSTKDIPP-----NTAIGLLLDKTNFYAESGGQIADTGRIVIDDVVE- 552
Query: 600 NGKVEIGELASLEGKIVH-----FGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
++ ++ G ++H +G + S +V E D R H+ +H+
Sbjct: 553 ---FKVMDVQDFGGYVLHSGYIEYGELNSDDEVI------CEYDELRRSPIRNNHSGTHI 603
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIANQVQVD 712
LN +LR VL QK V +D+ DFS + + +D + +E+ N D+ AN
Sbjct: 604 LNHSLREVLGEDVNQKGSLVDNDKLRFDFS-HKTQVKLDELKKIEELSNKDIRANH---- 658
Query: 713 RRHMRASELPF---LTHLTVIPGEIYPDDVILIDISDKENVISREP------------CC 757
+ + + EL + L + GE YP+ V ++ I + + +P C
Sbjct: 659 KIYAKDVELDLALKIEGLRAVFGETYPNPVRVVSIGMDVDTMLADPKKADWRQYSVELCG 718
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGN 817
GTHV TG ++ ++ G+R I TG+++ K +++++ N
Sbjct: 719 GTHVEQTGLLKDLIIVEESGIAKGIRRIIAYTGEAAHKVQREAKLFE-----QKLVDLDN 773
Query: 818 IPYGDDSIAFVNS 830
+P+G + A V +
Sbjct: 774 LPFGPEKEAAVKT 786
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P R ++QK IR GGKHNDL G+D
Sbjct: 32 VPHNDPTLLFTNAGMNQFKPIFLGTVNKSDPMSSLKRAVDTQKVIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K+DA MA E LTK L RLY T+
Sbjct: 92 SYHHTFFEMLGNWSFGDYFKKDAIEMAWELLTK-VYGLDPSRLYVTY 137
>gi|440467325|gb|ELQ36554.1| alanyl-tRNA synthetase [Magnaporthe oryzae Y34]
gi|440479248|gb|ELQ60029.1| alanyl-tRNA synthetase [Magnaporthe oryzae P131]
Length = 961
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 268/859 (31%), Positives = 425/859 (49%), Gaps = 85/859 (9%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLT 65
+++ V+ ++++R +FL+YF +GHT+V SS +VP+ D ++ F N+GM QFK +FLG
Sbjct: 1 MATEVKWTAETVRKTFLNYF-EERGHTVVPSSSVVPHSDPTLLFTNAGMNQFKPIFLGTI 59
Query: 66 PAPYP-----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
P R +SQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A M
Sbjct: 60 GKTDPMAGLKRAVDSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAISM 119
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ E LTK L RLY TYF G+ + GL D E +++WLE GVP DHI MK NFW
Sbjct: 120 SWELLTKV-YGLDPARLYVTYFEGNPEMGLEPDLEAKNLWLENGVPEDHILPGNMKDNFW 178
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A VN D ++E+WN VFI R ++ L
Sbjct: 179 EMGDQGPCGPCSEIHYDKVGGRNAA-HLVNMDDPLVVEVWNNVFIQFDRQQDKSLKSLPA 237
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
++DTG+GFERLV+ LQNKTS Y TD+F PL I++V+GA+ Y + + +DT+Y
Sbjct: 238 KHVDTGMGFERLVSALQNKTSNYATDVFSPLFARIQEVTGAREYTDKYGKDDADGIDTAY 297
Query: 301 RMLSDYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+++D+ R++ ++AD P+ +R V+R + + F + G ++ +
Sbjct: 298 RVVADHIRLMAFSIADGAVPNNDGRGYVVRRVLRRGVRYARKYFNAEIGGFFSQILPTLV 357
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
E +G+ +PE+ I+ IL EE F + L + + + E++ M
Sbjct: 358 EHMGEQFPELGQKQQDIKEILDEEEEAFA----------RTLDRGEKQFEKYASM----- 402
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
A ++SG + LYDT+G +++ + +A + +T+
Sbjct: 403 -----------AIKAGENKLSGSDVWRLYDTFGFPEDLTKLMAEERGITIDEAEVSVARE 451
Query: 478 ELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
+ +E SKA S V +D+ +++ K D+ +K Y + + + I G
Sbjct: 452 KAREASKAVKES-VQTFAKLDVHRISELENELKV-TRTDSEAK-YLKGDITSKVYLIYTG 508
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
K ++ +GLI DKTN YA +GGQI D G +
Sbjct: 509 KDFLKSSK---------------EIPPKTPLGLILDKTNFYAESGGQIADTGRIVI---- 549
Query: 598 QENGKVEIGELASLE--GKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+G E L + E G ++H G + ++T G + E D R HT +H+L
Sbjct: 550 --DGVAEFKVLDTQEFGGYVLHNG-YLEYGELTAGDSVICEYDELRRQPIRNNHTGTHIL 606
Query: 656 NAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
N +LR VL QK V +++ DFS + ++V + +E N I + +
Sbjct: 607 NHSLREVLGDDINQKGSLVDNEKLRFDFS-HKTGVTVPELKKIEDLSNAYIRQNCKTFTK 665
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVF 762
+ + + + GE YP+ V ++ I + +++ P C GTHV
Sbjct: 666 DVDLDLAKQIEGVRAVFGETYPNPVRVVSIGIEVDMLLENPKNPEWRKVSVEFCGGTHVD 725
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQ-ILNVGNIPYG 821
TG ++ ++ G+R I TGD++ AA FS+ I + ++P+G
Sbjct: 726 QTGIMKDMIIVEESGIAKGIRRIVAYTGDAAHQV------QRLAADFSKRIDELESLPFG 779
Query: 822 DDSIAFVNSGMCQFKNVFL 840
+ A + + + + +
Sbjct: 780 TEKEAAIKTTQVDLEQLVI 798
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P R +SQKCIR GGKHNDL G+D
Sbjct: 34 VPHSDPTLLFTNAGMNQFKPIFLGTIGKTDPMAGLKRAVDSQKCIRAGGKHNDLDDVGKD 93
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A M+ E LTK L RLY T+
Sbjct: 94 SYHHTFFEMLGNWSFGDYFKKEAISMSWELLTK-VYGLDPARLYVTY 139
>gi|237842821|ref|XP_002370708.1| alanyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
gi|211968372|gb|EEB03568.1| alanyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
Length = 1037
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 274/845 (32%), Positives = 411/845 (48%), Gaps = 116/845 (13%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP--- 70
+++R ++L++F QGH + SSP++P GD+++ F+N+GM QFK +FLG P
Sbjct: 26 GEAVRGAYLEFF-EAQGHLIYPSSPVIPRGDNTLLFINAGMNQFKPIFLGQIDRSSPLSK 84
Query: 71 --RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
RVA++QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+KR+A A + LT+
Sbjct: 85 LRRVADTQKCIRAGGKHNDLEDVGKDVYHHTFFEMLGNWSFGDYFKREAIAWAWQLLTEV 144
Query: 129 PVSLPLDRLYFTYFGGSDQY-GLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
+P DRLY +YFGG + P DEE RDIWL+ +P + + G K NFWEM TGP
Sbjct: 145 -YKIPKDRLYASYFGGDPRLPSCPPDEEARDIWLQY-LPANRVLPFGAKENFWEMADTGP 202
Query: 188 CGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
CG SEIHYD + G +S+L VNAD ++EIWN+VF+ + R ++ PL +DTG
Sbjct: 203 CGPCSEIHYDRIGGRDASSL--VNADDPSVLEIWNLVFMQYNREKDGSLTPLPAPCVDTG 260
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVS-GAKPYGRTFTTSNRTDLDTSYRMLSD 305
+G ER+ ++LQ+K S YDTDLF L + I ++S G +PYG ++ +D +YR+L+D
Sbjct: 261 MGLERVASVLQDKQSNYDTDLFTALFDKILELSPGLRPYGGKVGEEDKDMVDMAYRVLAD 320
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
++R +T A+AD P + LR ++R A+ + + +G K L + +LG+
Sbjct: 321 HARCLTAAIADGAEPSNEGRGYVLRRILRRAVRYARQTLGMAEGNFPK-LVPVVVSLLGE 379
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE++ + K+ IL +E + F V+ +K + N ++ G +
Sbjct: 380 TFPEMKKNEEKVVRILLKEEQQFSRTLDNGVERFKKVA---------NSLQAKGQKV--- 427
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
G AFTLY TYG ++ Q +A L + E FE+K + +
Sbjct: 428 --------------FPGGEAFTLYSTYGFPLDLTQLMAEEVGLQVDAEEFERKFDAHRAA 473
Query: 483 S-----KAKAASNV----PDID--LMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNL 531
S K A V PD L + P TDD KY+++ + T ++
Sbjct: 474 SENTSFKQGGAGAVYALPPDQRHLLAQSRKVPPTDDSAKYEWNVKDQAALMTQDAVEA-- 531
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
I +V I R A ++ S E+ V +I DKT YA GGQI D+G
Sbjct: 532 --APIKAKVMAI-WDGKRFAPEVTAVASPTGEN--LVAVILDKTCFYAEQGGQIGDVGRL 586
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTT 651
++ E V+ + I+H G+ +S + G VD R + HT
Sbjct: 587 VDLSSQAEFEVVDSQKSGDF---ILHIGS-MSKGTLREGTELVPAVDYVRRFRLAQHHTG 642
Query: 652 SHLLNAALRRVL---------------------------TCTYQKSCRVFSDECA----- 679
+HLLN ALR VL +C +K D
Sbjct: 643 THLLNFALREVLIRKLRSGGKASANGDKREDTNGIRICESCLNEKELEDGEDIQQKGSLV 702
Query: 680 ----LDFSVYGET-LSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEI 734
L F GE L + + AVE + D IA V + + + + L + GE+
Sbjct: 703 EVKRLRFDYAGEKPLENEDIIAVENVVKDCIAQARPVHYKEVPLEQAMKIPGLRAVFGEV 762
Query: 735 YPDDVILIDIS-DKENVI-------------SREPCCGTHVFNTGHIESCTVIGYKSYNH 780
YPD V ++ + D E+++ S E C GTH+ N + ++ +S
Sbjct: 763 YPDPVRVVSVGEDIESLVALADSSQPETPFASIELCGGTHLHNASQLSDFCILSEESVAK 822
Query: 781 GVRSI 785
GVR +
Sbjct: 823 GVRRV 827
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP GD+++ F+N+GM QFK +FLG P RVA++QKCIR GGKHNDL G+D
Sbjct: 51 IPRGDNTLLFINAGMNQFKPIFLGQIDRSSPLSKLRRVADTQKCIRAGGKHNDLEDVGKD 110
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+KR+A A + LT+ +P DRLY ++
Sbjct: 111 VYHHTFFEMLGNWSFGDYFKREAIAWAWQLLTE-VYKIPKDRLYASY 156
>gi|224001280|ref|XP_002290312.1| alanine-trna ligase [Thalassiosira pseudonana CCMP1335]
gi|220973734|gb|EED92064.1| alanine-trna ligase [Thalassiosira pseudonana CCMP1335]
Length = 966
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 273/831 (32%), Positives = 404/831 (48%), Gaps = 103/831 (12%)
Query: 2 NNPNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVF 61
+ P +++ +RS+F+ YF GHT +SSP VP+ D ++ F N+GM Q+K +F
Sbjct: 4 DKPVFATHPEWPMDKVRSTFISYF-ERNGHTFWRSSPCVPHDDPTLLFTNAGMNQYKPLF 62
Query: 62 LG-----LTPAPYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRD 116
LG L A R NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++
Sbjct: 63 LGTCDPALKMASLKRATNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKE 122
Query: 117 ACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMK 176
A MA + LT+ L +RLY TYFGG + PCD+E R+IWL+ +P + + K
Sbjct: 123 AIEMAWKCLTEE-FKLDPNRLYATYFGGDES--TPCDDEAREIWLQY-LPAERVLPFDAK 178
Query: 177 CNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIV 236
NFWEMG+TGPCG +EIHYD G A VNAD D+IEIWN VFI R + ++
Sbjct: 179 DNFWEMGATGPCGPCTEIHYDRIGN-RDASKLVNADLPDVIEIWNNVFIQFNREADGSLR 237
Query: 237 PLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL 296
PL ++DTG+GFERL +ILQ S YDTD+F+PL + I+K++GA+PY + +
Sbjct: 238 PLPAQHVDTGMGFERLTSILQGVDSNYDTDIFIPLFDAIQKITGARPYAGKIEKEDPEFI 297
Query: 297 DTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELS 353
D +YR+++D+ R ++ A+AD P + LR V+R A+ + G +L
Sbjct: 298 DMAYRVVADHVRTLSFAIADGAVPSNDGRGYVLRRVLRRAVRYGRQNLNAELG-FFAQLV 356
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+ E++GD +PE+++ + I+ EE F + E+ +++ F
Sbjct: 357 RTLVELMGDTFPELREKEEYVTAIIREEEESFSKTVDKGIVEFNKRCDALGDVKVF---- 412
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
G+ A LY + G ++ + + + LTL E ++
Sbjct: 413 ------------------------PGEDAHFLYTSMGFPVDLTELMCEERGLTLDMEGYD 448
Query: 474 QKLNELKERSKAK-----AASNVPDIDLMDL-------KHFPVTDDKYKYDYHYDTNSKR 521
K+ E +E S A +A + D+ L+ K T+D KY ++ D
Sbjct: 449 AKMKEEQELSNAAHLAKMSAGSGKDMRLVAEQTSHLVNKGVDATNDDAKYVWNED----- 503
Query: 522 YTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATA 581
L G +I + I ++ +DSI E+ A VG++ DKTN Y +
Sbjct: 504 ---------LEGSII--KALFIGRNETEDGI--GFVDSISKENGA-VGIVLDKTNFYGES 549
Query: 582 GGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
GGQ D G + T +EI + ++H G+V VT + VD
Sbjct: 550 GGQTFDTG----SIKTSSGATIEITNVQIYGSFVLHIGDVTEG-TVTVNDAATCCVDYVR 604
Query: 642 RLGCMRAHTTSHLLNAALRRVL----------TCTYQKSCRVFSDECALDFSVYGETLSV 691
R HT +H+LN ALR VL QK V ++ DFS G L+
Sbjct: 605 RAPIAANHTMTHILNFALRDVLVTRGDADQHGASVDQKGSLVDENKLRFDFSWSG-PLTP 663
Query: 692 DSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISD----- 746
+ + AVEK D I + V VD ++ L + GE+YPD V ++ +S
Sbjct: 664 EQLVAVEKICVDQINSAVPVDNYVAPLEGAQQISSLRAVFGEVYPDPVRVVAVSPSPITS 723
Query: 747 --------KENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLT 789
+ N S E C GTH+ NT + ++ + GVR I +T
Sbjct: 724 MLENPQDAQWNKYSVEFCGGTHLKNTSEAQGFVLLSEEGIAKGVRRITGVT 774
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-----LTPAPYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG L A R NSQKCIR GGKHNDL G+D
Sbjct: 41 VPHDDPTLLFTNAGMNQYKPLFLGTCDPALKMASLKRATNSQKCIRAGGKHNDLDDVGKD 100
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++A MA + LT+ L +RLY T+
Sbjct: 101 VYHHTFFEMLGNWSFGDYFKKEAIEMAWKCLTE-EFKLDPNRLYATY 146
>gi|221485680|gb|EEE23961.1| alanyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
Length = 1037
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 274/845 (32%), Positives = 411/845 (48%), Gaps = 116/845 (13%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP--- 70
+++R ++L++F QGH + SSP++P GD+++ F+N+GM QFK +FLG P
Sbjct: 26 GEAVRGAYLEFF-EAQGHLIYPSSPVIPRGDNTLLFINAGMNQFKPIFLGQIDRSSPLSK 84
Query: 71 --RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
RVA++QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+KR+A A + LT+
Sbjct: 85 LRRVADTQKCIRAGGKHNDLEDVGKDVYHHTFFEMLGNWSFGDYFKREAIAWAWQLLTEV 144
Query: 129 PVSLPLDRLYFTYFGGSDQY-GLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGP 187
+P DRLY +YFGG + P DEE RDIWL+ +P + + G K NFWEM TGP
Sbjct: 145 -YKIPKDRLYASYFGGDPRLPSCPPDEEARDIWLQY-LPANRVLPFGAKENFWEMADTGP 202
Query: 188 CGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
CG SEIHYD + G +S+L VNAD ++EIWN+VF+ + R ++ PL +DTG
Sbjct: 203 CGPCSEIHYDRIGGRDASSL--VNADDPSVLEIWNLVFMQYNREKDGSLTPLPAPCVDTG 260
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVS-GAKPYGRTFTTSNRTDLDTSYRMLSD 305
+G ER+ ++LQ+K S YDTDLF L + I ++S G +PYG ++ +D +YR+L+D
Sbjct: 261 MGLERVASVLQDKQSNYDTDLFTALFDKILELSPGLRPYGGKVGEEDKDMVDMAYRVLAD 320
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
++R +T A+AD P + LR ++R A+ + + +G K L + +LG+
Sbjct: 321 HARCLTAAIADGAEPSNEGRGYVLRRILRRAVRYARQTLGMAEGNFPK-LVPVVVSLLGE 379
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE++ + K+ IL +E + F V+ +K + N ++ G +
Sbjct: 380 TFPEMKKNEEKVVRILLKEEQQFSRTLDNGVERFKKVA---------NSLQAKGQKV--- 427
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
G AFTLY TYG ++ Q +A L + E FE+K + +
Sbjct: 428 --------------FPGGEAFTLYSTYGFPLDLTQLMAEEVGLQVDAEEFERKFDAHRAA 473
Query: 483 S-----KAKAASNV----PDID--LMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNL 531
S K A V PD L + P TDD KY+++ + T ++
Sbjct: 474 SENTSFKQGGAGAVYALPPDQRHLLAQSRKVPPTDDSAKYEWNVMNQAALMTQDAVEA-- 531
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
I +V I R A ++ S E+ V +I DKT YA GGQI D+G
Sbjct: 532 --APIKAKVMAI-WDGKRFAPEVTAVASPTGEN--LVAVILDKTCFYAEQGGQIGDVGRL 586
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTT 651
++ E V+ + I+H G+ +S + G VD R + HT
Sbjct: 587 VDLSSQAEFEVVDSQKSGDF---ILHIGS-MSKGTLREGTELVPAVDYVRRFRLAQHHTG 642
Query: 652 SHLLNAALRRVL---------------------------TCTYQKSCRVFSDECA----- 679
+HLLN ALR VL +C +K D
Sbjct: 643 THLLNFALREVLIRKLRSGGKASANGDKREDTNGLRICESCLNEKELEDGEDIQQKGSLV 702
Query: 680 ----LDFSVYGET-LSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEI 734
L F GE L + + AVE + D IA V + + + + L + GE+
Sbjct: 703 EVKRLRFDYAGEKPLENEDIIAVENVVKDCIAQARPVHYKEVPLEQAMKIPGLRAVFGEV 762
Query: 735 YPDDVILIDIS-DKENVI-------------SREPCCGTHVFNTGHIESCTVIGYKSYNH 780
YPD V ++ + D E+++ S E C GTH+ N + ++ +S
Sbjct: 763 YPDPVRVVSVGEDIESLVALADSSQPETPFASIELCGGTHLHNASQLSDFCILSEESVAK 822
Query: 781 GVRSI 785
GVR +
Sbjct: 823 GVRRV 827
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP GD+++ F+N+GM QFK +FLG P RVA++QKCIR GGKHNDL G+D
Sbjct: 51 IPRGDNTLLFINAGMNQFKPIFLGQIDRSSPLSKLRRVADTQKCIRAGGKHNDLEDVGKD 110
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+KR+A A + LT+ +P DRLY ++
Sbjct: 111 VYHHTFFEMLGNWSFGDYFKREAIAWAWQLLTE-VYKIPKDRLYASY 156
>gi|371775799|ref|ZP_09482121.1| alanyl-tRNA synthetase [Anaerophaga sp. HS1]
Length = 878
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 270/797 (33%), Positives = 405/797 (50%), Gaps = 108/797 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K +R F D+F Q H +V S+P+V D ++ F N+GM QFK++FLG + R
Sbjct: 1 MRAKEVRQKFFDFFRANQ-HVIVPSAPMVLKNDPTLMFTNAGMNQFKDIFLGNHKPEHLR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VAN+QKC+RV GKHNDL GRDSYHHT FEMLGNWSF DY+K A +A FLT+ +
Sbjct: 60 VANAQKCLRVSGKHNDLEEVGRDSYHHTMFEMLGNWSFGDYFKEKAIDLAWTFLTRE-LG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ RLY T F G D L D+E W + +P HI K NFWEMG TGPCG
Sbjct: 119 IDKSRLYATIFEGDDTDKLARDDEAATAWAKY-LPEKHIINGSKKDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDM------KGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D+ K +P L VN D ++IEIWN+VFI + R + T++PL + +IDT
Sbjct: 178 SEIHIDLRDEYQRKSQPGYEL--VNKDHPEVIEIWNLVFIQYNRKADGTLIPLPQKHIDT 235
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL +LQ K S YDTD+F P++ I +SG + YG S+ TD+ + R+++D
Sbjct: 236 GMGFERLCRVLQGKKSNYDTDIFQPVIRQISSISGVE-YG----ASDETDI--AMRVIAD 288
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ + + + L + E +G+
Sbjct: 289 HIRTIAFSITDGQLPSNNKAGYVIRRILRRAVRYGYTFLNMNR-PFMSGLLPALIETMGE 347
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE++ I ++ EE F +KT E G+ L +
Sbjct: 348 AYPELKAQQELIDKVIYEEEESF--------------LKTL----------ETGITLLNR 383
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+ L ++ + +SG +AF LYDTYG ++ + + + K L + + FE+++N ++
Sbjct: 384 IIEDMLGKNYKV--VSGKVAFELYDTYGFPLDLTELILSEKGLVVNRQEFEKEMN--AQK 439
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
++A+ A++V D + LK DD+ ++ +G F
Sbjct: 440 ARARNAASVETGDWIQLKE----DDQEEF------------------------VGYDYFE 471
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
D + R+ + IQ ++ L+F+ T YA +GGQ+ D GV L N E
Sbjct: 472 TDVYITRYRQ-------IQAKNKTQYQLVFNITPFYAESGGQVGDTGV--LKN---EKET 519
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
+ I + IVH N + S G T R VD R R HT +HLL+ ALR+V
Sbjct: 520 IPILDTKKENDLIVHITNKLPS---DLGSTFRAVVDVSKRKNAARNHTATHLLHKALRKV 576
Query: 663 LT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIANQVQVDRRHM---R 717
L Q+ V D DFS + + +S D + +EK +N D+ AN + + R + +
Sbjct: 577 LGPHVEQRGSLVHPDYLRFDFSHF-QKVSPDELRQIEKLVNADIRANIKREEHREVPIDK 635
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
A E+ + + GE Y D V I D S E C GTHV TG I ++G +
Sbjct: 636 AREMGAIA----LFGEKYGDVVRTIGFGD-----SIELCGGTHVDATGEIGFFRIVGETA 686
Query: 778 YNHGVRSIKCLTGDSSK 794
+ GVR I+ ++G+ ++
Sbjct: 687 VSAGVRRIEAVSGEKAE 703
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++FLG + RVAN+QKC+RV GKHNDL GRDSYHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDIFLGNHKPEHLRVANAQKCLRVSGKHNDLEEVGRDSYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
LGNWSF DY+K A +A FLT+ + + RLY T
Sbjct: 92 LGNWSFGDYFKEKAIDLAWTFLTR-ELGIDKSRLYATI 128
>gi|390948124|ref|YP_006411884.1| alanyl-tRNA synthetase [Alistipes finegoldii DSM 17242]
gi|390424693|gb|AFL79199.1| alanyl-tRNA synthetase [Alistipes finegoldii DSM 17242]
Length = 873
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 260/792 (32%), Positives = 392/792 (49%), Gaps = 96/792 (12%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
S IR +FLD+F ++GH +V S+P+V GD ++ F N+GM QFK++FLG P YPR A
Sbjct: 3 SNKIRRAFLDFF-ESKGHVIVPSAPMVVKGDPTLMFTNAGMNQFKDIFLGNAPRKYPRAA 61
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
++QKC+RV GKHNDL G D+YHHT FEMLGNWS+ DY+K++A A E L LP
Sbjct: 62 DTQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSYGDYFKKEAIEWAWELLGG-VYKLP 120
Query: 134 LDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSE 193
DR+Y T F GS++ G+P D+E D W + +P DHI + NFWEMG TGPCG SE
Sbjct: 121 ADRMYATVFEGSEEDGVPFDQEAYDYWKQF-LPEDHIIRGNKHDNFWEMGETGPCGPCSE 179
Query: 194 IHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
IH+D++ E A VNA +IEIWN+VF+ R + ++ PL +DTG+GF
Sbjct: 180 IHFDLRDEAEIAAKPGREMVNAGHPQVIEIWNLVFMQFNRKANGSLEPLPARNVDTGMGF 239
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERL ILQ K S YDTD+F P ++ I ++SG K YG D + R+++D+ R
Sbjct: 240 ERLCMILQGKKSNYDTDVFQPTIQRISQLSG-KVYGAD------AKCDVAMRVIADHLRA 292
Query: 310 ITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
I ++AD P A +R ++R A+ + + K L + E +G+ +PE
Sbjct: 293 IAFSIADGQLPSNVKAGYVIRRILRRAVRYGYTYLGFTEPTICK-LVPGLVEQMGEQFPE 351
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
++ + I+ ++ EE F LR A N+++ GV TK
Sbjct: 352 LKAQQSLIEKVIEEEEASF--LRTLATG--------------INLLD------GVIEKTK 389
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
R+ ISG AF LYDT+G ++ + +A + + + AFE +L KERS+
Sbjct: 390 GEGREL----ISGKDAFELYDTFGFPIDLTELIAREQGVGVDLAAFETELQAQKERSRNA 445
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
AA + D ++ FP+ + + YDT +++
Sbjct: 446 AAVDTDDW----VELFPIRESLFT---GYDTLTEQ------------------------- 473
Query: 547 AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIG 606
+R AR + + L+FD+T Y +GGQI DIG Y+ N + ++ +
Sbjct: 474 -VRIARYRRVTSKGKTSYQ----LVFDRTPFYGNSGGQIGDIG--YIENADE---RIAVV 523
Query: 607 ELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TC 665
G I+H +V P VDA R HT +HL++ ALR+VL
Sbjct: 524 ATEKENGLIIH---IVRELPENPAAGFTAVVDAAKRQSAANNHTATHLMHEALRKVLGQH 580
Query: 666 TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLT 725
QK V + DFS + + ++ + VE +N + ++ E
Sbjct: 581 VEQKGSMVTPEILRFDFSHF-QKMTPQELREVEMLVNRAVRANYPLEENREATKEEAEKC 639
Query: 726 HLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSI 785
++ GE Y D V ++ S E C GTH TG+I ++ + + GVR I
Sbjct: 640 GAMMLFGEKYGDKVRMVRFGS-----SVELCGGTHTSATGNIGFFKILNESAISAGVRRI 694
Query: 786 KCLTGDSSKAAV 797
+ +TG+ ++ +
Sbjct: 695 EAVTGERAEQII 706
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++FLG P YPR A++QKC+RV GKHNDL G D+YHHT FE
Sbjct: 31 GDPTLMFTNAGMNQFKDIFLGNAPRKYPRAADTQKCLRVSGKHNDLEEVGHDTYHHTMFE 90
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWS+ DY+K++A A E L LP DR+Y T
Sbjct: 91 MLGNWSYGDYFKKEAIEWAWELLGG-VYKLPADRMYAT 127
>gi|404404277|ref|ZP_10995861.1| alanyl-tRNA ligase [Alistipes sp. JC136]
Length = 873
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 259/795 (32%), Positives = 391/795 (49%), Gaps = 98/795 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR +FLD+F ++GH +V S+P+V GD ++ F N+GM QFK++FLG P YPR
Sbjct: 1 MESNKIRQAFLDFF-ESKGHVIVPSAPMVVKGDPTLMFTNAGMNQFKDIFLGNAPRKYPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A++QKC+RV GKHNDL G D+YHHT FEMLGNWS+ DY+K++A A E L
Sbjct: 60 AADTQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSYGDYFKKEAIEWAWELL-HDVYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP +R+Y T F GS++ G+P D+E D W + +P DHI + NFWEMG TGPCG
Sbjct: 119 LPAERMYATVFEGSEEDGVPFDQEAYDYWKQF-LPEDHIIRGNKHDNFWEMGETGPCGPC 177
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH+D++ E AL VNA +IEIWN+VF+ R + ++ L +DTG+
Sbjct: 178 SEIHFDLRDEAEVALKPGREMVNASHPQVIEIWNLVFMQFNRKANGSLEELPARNVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL ILQ K S YDTD+F P + I +SG K YG D + R+++D+
Sbjct: 238 GFERLCMILQGKKSNYDTDVFQPTIGRIAAMSGKK-YGED------AKADVAMRVIADHL 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++AD P A +R ++R A+ + L K L + E +G +
Sbjct: 291 RAIAFSIADGQLPSNVKAGYVIRRILRRAVRYGYTYLGFTEPTLCK-LVPGLVEQMGGQF 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ I+ ++ EE F LR A N+++ GV
Sbjct: 350 PELKAQQGLIEKVIEEEESSF--LRTLATG--------------INLLD------GVIER 387
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
TK+ R+ ISG AF LYDT+G ++ + +A + + + AFE++L KERS+
Sbjct: 388 TKKEGREF----ISGRDAFELYDTFGFPIDLTELIAREQGVGVDLAAFEKELQAQKERSR 443
Query: 485 AKAASNVPD-IDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
AA + D ++L+ +K T YDT +++
Sbjct: 444 NAAAVDTDDWVELIPIKESVFTG--------YDTLTEK---------------------- 473
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
+R AR + + L+FD+T Y +GGQI DIG N ++
Sbjct: 474 ----VRIARYRRVTSKGKTSYQ----LVFDRTPFYGNSGGQIGDIGF-----IESANERI 520
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
+ G I+H +V P +VD R HT +HL++ ALR+VL
Sbjct: 521 PVVATEKENGLIIH---IVGELPENPAAEFTAKVDPEKRQAAANNHTATHLMHEALRKVL 577
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
+ QK V + DFS + + ++ + + VE+ +N + ++ E
Sbjct: 578 GSHVEQKGSMVTPEILRFDFSHF-QKVTPEELREVERLVNRAVRANYPLEENREATKEEA 636
Query: 723 FLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGV 782
++ GE Y D V ++ S E C GTH TG+I ++ + + GV
Sbjct: 637 EKCGAMMLFGEKYGDKVRMVRFGS-----SVELCGGTHTSATGNIGFFKILSESAISAGV 691
Query: 783 RSIKCLTGDSSKAAV 797
R I+ +TG+ ++ +
Sbjct: 692 RRIEAVTGEQAEKII 706
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++FLG P YPR A++QKC+RV GKHNDL G D+YHHT FE
Sbjct: 31 GDPTLMFTNAGMNQFKDIFLGNAPRKYPRAADTQKCLRVSGKHNDLEEVGHDTYHHTMFE 90
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWS+ DY+K++A A E L LP +R+Y T
Sbjct: 91 MLGNWSYGDYFKKEAIEWAWELL-HDVYKLPAERMYAT 127
>gi|449017733|dbj|BAM81135.1| alanine--tRNA ligase cytoplasmic [Cyanidioschyzon merolae strain
10D]
Length = 1061
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 261/819 (31%), Positives = 400/819 (48%), Gaps = 87/819 (10%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP--- 70
S +R +F+DYF + +GHT V+SSP+VP+ D ++ F N+GM QFK +FLG P
Sbjct: 25 SSRVRQTFIDYFID-RGHTFVESSPVVPFDDPTLLFTNAGMNQFKPLFLGRVDPTSPLFG 83
Query: 71 --RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R N+QKCVR GGKHNDL GRD+YHHTFFEMLGNWSF DY+ +A A + LT+
Sbjct: 84 LKRACNTQKCVRAGGKHNDLDDVGRDTYHHTFFEMLGNWSFGDYFNAEAINWAWDLLTR- 142
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
L D+LY TYFGG LP D +TRD WL +P + + G K NFWEMG TGPC
Sbjct: 143 VYGLDPDQLYATYFGGDAANQLPADLDTRDQWLRY-LPPERVLPFGTKDNFWEMGETGPC 201
Query: 189 GYSSEIHYD-MKGEPS-SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
G +EIHYD ++G P+ A A VNA LIEIWN+V I R + L ++DTG
Sbjct: 202 GPCTEIHYDRVRGRPAHQAAALVNAGHESLIEIWNLVLIQFNREPDGQLRRLPARHVDTG 261
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSG-AKPYGRTFTTSNRTDLDTSYRMLSD 305
+G ERL ILQ K+S YDTD+F PL I++ SG ++ Y ++ DT+YR+++D
Sbjct: 262 MGLERLCAILQGKSSNYDTDMFAPLFAAIQRESGSSEAYAGRLGATDSALTDTAYRVVAD 321
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R +T +AD P + LR ++R A+ + +G + L ++A +
Sbjct: 322 HIRTLTFGIADGAVPSNEGRGYVLRRILRRAVRYGQQFLNAPRG-FLHRLVPDVARLYQT 380
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE+ + I ++ EE F K L++F+ + G +
Sbjct: 381 TFPEVAAKADYIAGVIQEEEMAFSMTLKRG-------------LDRFHETARALVAAGER 427
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
G AF LYD+ G ++ Q LA + L + EA+E ++ + +
Sbjct: 428 VF-------------PGKEAFFLYDSMGFPLDLTQILARERGLEVDVEAYESEMARQRAQ 474
Query: 483 SKAKAASNVPDIDLMDLKHFP--VTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
S A + + + L P V +++K D++ ++ P L+ ++ I G +
Sbjct: 475 SSAAHRKRLGAAEALVLGPEPLAVLSEQWKISPTDDSHKYQWYEP-LECTVLAIYAGSEG 533
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
F + + + +A VG+I D+T YA AGGQ+ D G + +
Sbjct: 534 F---------------LPAAETGDDACVGVILDRTPFYAEAGGQVADTG--------RLD 570
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
+ + + S G +VH G ++ G VD R HT +H+LN A+
Sbjct: 571 ERFHVINVQSFGGYVVHIGY----GRIAVGERVIAHVDYERRALVAPNHTATHILNWAIW 626
Query: 661 RVL--TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
+VL C QK V + DF+ YG L+ + +E+ +VIA V + +
Sbjct: 627 QVLGQQCD-QKGSLVDEQKLRFDFA-YGRGLTAAELERIEQCCREVIARNFVVYTQQVSL 684
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDI-SDKENVI-----------SREPCCGTHVFNTGH 766
+ + L + GE YP +V ++ I + E V+ S E C GTH+ TG
Sbjct: 685 TTAKQIRSLRAVFGETYPSEVRVVCIGAPVEKVLAAPVQSDWDQYSIELCGGTHLQRTGE 744
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST 805
+ ++ + G+R + TG S+ + + L++
Sbjct: 745 AHAFCLVEEGAIAKGIRRVVARTGASALECMALARGLAS 783
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 69/107 (64%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P R N+QKC+R GGKHNDL GRD
Sbjct: 50 VPFDDPTLLFTNAGMNQFKPLFLGRVDPTSPLFGLKRACNTQKCVRAGGKHNDLDDVGRD 109
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+ +A A + LT+ L D+LY T+
Sbjct: 110 TYHHTFFEMLGNWSFGDYFNAEAINWAWDLLTR-VYGLDPDQLYATY 155
>gi|325104121|ref|YP_004273775.1| alanyl-tRNA synthetase [Pedobacter saltans DSM 12145]
gi|324972969|gb|ADY51953.1| alanyl-tRNA synthetase [Pedobacter saltans DSM 12145]
Length = 880
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 271/804 (33%), Positives = 398/804 (49%), Gaps = 98/804 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K IR +FLD+F ++GH +V S+PIV D ++ F N+GM QFK++FLG P YPR
Sbjct: 3 MTAKEIRQAFLDFFA-SKGHQIVPSAPIVVKNDPTLMFTNAGMNQFKDLFLGEAPIKYPR 61
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++Q+C+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A + E LT +
Sbjct: 62 VADTQRCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAIAWSWELLTDV-LK 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY T F G ++ GLP D++ D W VP I K K NFWEMG TGPCG
Sbjct: 121 LDKDRLYVTVFEGDEKEGLPMDQDAYDFWKAF-VPESRILKGNKKDNFWEMGDTGPCGPC 179
Query: 192 SEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH+D + + A VNAD +IEIWN VF+ R+ ++ L ++DTG+
Sbjct: 180 SEIHFDNRSDEERAKVDGATLVNADDPQVIEIWNNVFMEFNRLKDGSLKKLPAQHVDTGM 239
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRT-DLDTSYRMLSDY 306
GFERLV ++Q KTS YD+D+F P+++ I K +G PY T ++ + R+++D+
Sbjct: 240 GFERLVRVIQGKTSNYDSDVFTPIIDFISKSAGI-PYNAAATPDDKDWGQAVAMRVMADH 298
Query: 307 SRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R I A+AD P A +R ++R A+ + K+ L K + A+ G V
Sbjct: 299 IRAIAFAIADGQLPSNNKAGYVIRRILRRAVRYAYQYLGFKEPFLNKLVPLLAAQFKG-V 357
Query: 364 YPEI---QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
+ E+ QD + K+ IL EE+ L E G+
Sbjct: 358 FDELISQQDFVQKV--ILEEENSFLRTL-------------------------ENGINRF 390
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
KY+ +D +I G AF LYDTYG ++ + +A K LT+ F+ +L + K
Sbjct: 391 EKYI-----QDNQDRQIDGAFAFELYDTYGFPIDLTELMAREKGLTVDMAGFDTELQKQK 445
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
ERS+A A + D V +D + VG D+V
Sbjct: 446 ERSRAATAIDAGD-------WITVNEDD-------------------EVEFVGY---DEV 476
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
+ I R + Q + L+ D T YA +GGQ+ D GV L N EN
Sbjct: 477 VATSR--ILKYRKVKAKGKEQYQ------LVLDVTPFYAESGGQVGDSGV--LEN---EN 523
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
+ I + G I+HF +V+ + ++V V R RL H+ +HLL+AAL+
Sbjct: 524 ESIIINDTKKENGLIIHFADVLPH-NLNATFIAKVNVHTR-RL-TENNHSATHLLHAALK 580
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
VL QK V +D DFS + + ++ +A +E +N + + +
Sbjct: 581 AVLGDHVNQKGSLVNADVLRFDFSHFSK-VTEQEIAKIEAIVNQKVRENIPLKEERNVPY 639
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
+ + +T + GE Y D V +I D S+E C GTHV TG I ++ +
Sbjct: 640 QKALESGVTALFGEKYGDYVRVITFDDS---YSKELCGGTHVKATGQIGYFKIVSESAVA 696
Query: 780 HGVRSIKCLTGDSSKAAVENGKHL 803
GVR I+ +T D ++ + N L
Sbjct: 697 AGVRRIEAITADKAEEYINNQAQL 720
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++FLG P YPRVA++Q+C+RV GKHNDL G D+YHHT FEM
Sbjct: 34 DPTLMFTNAGMNQFKDLFLGEAPIKYPRVADTQRCLRVSGKHNDLEEVGIDTYHHTMFEM 93
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A + E LT + L DRLY T
Sbjct: 94 LGNWSFGDYFKKEAIAWSWELLTD-VLKLDKDRLYVT 129
>gi|387791242|ref|YP_006256307.1| alanine--tRNA ligase [Solitalea canadensis DSM 3403]
gi|379654075|gb|AFD07131.1| alanine--tRNA ligase [Solitalea canadensis DSM 3403]
Length = 869
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 265/789 (33%), Positives = 393/789 (49%), Gaps = 99/789 (12%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
S+SIR +FLD+F ++GH +V S+P+V D ++ FVNSGM FK++FLG++P +PRVA
Sbjct: 3 SRSIRKAFLDFF-ESKGHKIVPSAPLVVKNDPTLMFVNSGMAPFKDIFLGVSPVKFPRVA 61
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A + A E LT+ LP
Sbjct: 62 DTQKCLRVSGKHNDLEEVGIDTYHHTLFEMLGNWSFGDYFKKEAIQWAWELLTEV-YKLP 120
Query: 134 LDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSE 193
DRLY T F G + L D E +IW + + D I K NFWEMG GPCG SE
Sbjct: 121 KDRLYVTVFEGDAKENLAPDNEALEIWKKY-IAADRILYGNKKDNFWEMGDQGPCGPCSE 179
Query: 194 IHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
IH D++ E A VN D ++EIWN VF+ R + ++ L ++DTG+GF
Sbjct: 180 IHIDLRSEEERAQKDGKELVNNDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGMGF 239
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERL LQ K S YDTD+F P+++ I G YG+ T D + R+++D+ R
Sbjct: 240 ERLCMALQQKRSNYDTDVFQPMIQFIASQCGI-AYGKVEKT------DIAMRVMADHIRA 292
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
I + D P T +R ++R A+ S K+ L K ++ +AE V+ E
Sbjct: 293 IAFTITDGQLPSNTGAGYVIRRILRRAVRYSYTFLNFKEPFLYKLVAL-LAEQFDGVFNE 351
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+++ + ++ ++ EE F LR L G++ K
Sbjct: 352 LKEQKSFVEKVVKEEEASF--LRT--------------------------LAGGIQRFEK 383
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
+A EI G+ AF LYDTYG ++ Q LA KL + + F + L K RS+A
Sbjct: 384 YIADH---KEIEGEFAFELYDTYGFPIDLTQLLARESKLNVDMDGFNKALEAQKNRSRAA 440
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
A + D L V++DK YD L+T + H
Sbjct: 441 TAIDTGDWVL-------VSEDKETEFLGYDQ---------LETEV--------------H 470
Query: 547 AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIG 606
+++ + I+ + L+ DKT YA GGQ+ D GV L N N V I
Sbjct: 471 ILKYRK-------IKAKGKEQYQLVLDKTPFYAEGGGQVGDTGV--LENA---NELVRIN 518
Query: 607 ELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TC 665
+ IVHF + + +T ++V+ D R H+ +HLL+AAL+RVL
Sbjct: 519 DTKKENNLIVHFTDELPE-DLTKAFVAKVDTDKRR--DTANNHSATHLLHAALKRVLGDH 575
Query: 666 TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLT 725
QK V + DFS + + ++ + +AA+EK +N+ I +++D + + +
Sbjct: 576 VNQKGSLVNEEYLRFDFSHFAK-VTDEEIAAIEKIVNEKIRENIKLDEQRKVPFQQAIDS 634
Query: 726 HLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSI 785
+T + GE Y D V +I S+E C G HV TG I S ++ + GVR I
Sbjct: 635 GVTALFGEKYGDFVRVITFDPS---YSKELCGGIHVPATGQIGSFKIVAESAVAAGVRRI 691
Query: 786 KCLTGDSSK 794
+ +T ++
Sbjct: 692 EAITATKAE 700
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ FVNSGM FK++FLG++P +PRVA++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFVNSGMAPFKDIFLGVSPVKFPRVADTQKCLRVSGKHNDLEEVGIDTYHHTLFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A + A E LT+ LP DRLY T
Sbjct: 92 LGNWSFGDYFKKEAIQWAWELLTE-VYKLPKDRLYVT 127
>gi|385790368|ref|YP_005821491.1| alanine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302327820|gb|ADL27021.1| alanine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 882
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 265/817 (32%), Positives = 395/817 (48%), Gaps = 112/817 (13%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP 70
++ S +R SF+ +F ++GH V+SSP+VP+ D ++ F N+GM QFK +FLG P +
Sbjct: 4 KMTSAQVRESFIKFF-ESKGHLFVRSSPVVPHDDPTLMFTNAGMNQFKAIFLGDNPKGWK 62
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R NSQKC+RV GKHNDL GRD+YHHTFFEMLGNWSF DYYK++A A E LT+
Sbjct: 63 RACNSQKCLRVSGKHNDLDVVGRDNYHHTFFEMLGNWSFGDYYKKEAISWAWELLTE-VW 121
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCG 189
LP +RL+ T + D+E IW ++ G+P D I + NFWEMG TGPCG
Sbjct: 122 KLPKERLFATVY--------QDDDEAWQIWKDVSGLPDDRIMRFDAHSNFWEMGDTGPCG 173
Query: 190 YSSEIHYDMKGEPSSA------LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYI 243
SEIHYD + A + VN + + IEIWN VF+ ++RVS +++PL +
Sbjct: 174 PCSEIHYDRGDLATQAETFKDPIKGVNGENDRYIEIWNNVFMQYERVSDGSLIPLKAKNV 233
Query: 244 DTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRML 303
DTG+GFER+ ILQ KTS YDTD+F P++ I ++SG PY N + T +R++
Sbjct: 234 DTGMGFERICAILQGKTSNYDTDVFTPIIAKIAELSGV-PY-------NDGEAGTPHRVI 285
Query: 304 SDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL 360
+D+ R I+ A+AD P + LR ++R A + + + K + +L +A+ +
Sbjct: 286 ADHIRAISFAIADGALPSNEGRGYVLRRILRRASRFARLLGQKK--PFICQLVQVLADTM 343
Query: 361 GDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
GD +PEI++ + ++ E F A ++ + + EL++ +
Sbjct: 344 GDAFPEIRERKEFVASVIKSEEESFIRTLDAGLERFAAI---SAELKKGD---------- 390
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
+I GD F LYDTYG ++ LA K L + E +E+ +NE K
Sbjct: 391 ---------------KIPGDKVFLLYDTYGFPPDLTGILAEEKGLLIDEEGYEKCMNEQK 435
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
ER++A + + T+ +Y TN Y +T +V
Sbjct: 436 ERARANMKQGINTMG---------TEGWTQYS-EASTNFVGYELSACETKVV-------- 477
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN-TTQE 599
R + SI LE + YA GGQ+ D G + Q
Sbjct: 478 ---------RWREDKGVLSIVLE----------TSPFYAEMGGQVGDKGTLVSADLEIQV 518
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
V++ + A GK+V + + T G VD R + H+ +HLL AAL
Sbjct: 519 FDTVKVNDTALCRGKVVKG----EANEKTMGAVFMATVDNDRRADIRKNHSATHLLQAAL 574
Query: 660 RRVLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R VL Q+ S+E DFS + ++ + + VE +N I + V M
Sbjct: 575 REVLGTHVQQQGSFVSNELLRFDFSHF-NAMTAEEIQKVEDIVNAKIMECLPVHTDVMDV 633
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
E + + GE Y D V ++ + D SRE C G HV NTG+I ++ S
Sbjct: 634 DEAKASGAMALF-GEKYGDKVRVVKMGDAGVEFSRELCGGLHVQNTGNIGMVKIVSESSV 692
Query: 779 NHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNV 815
+ GVR I+ ++G + LS + +QILN
Sbjct: 693 SAGVRRIEAVSGRGA---------LSLLRAGTQILNA 720
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK +FLG P + R NSQKC+RV GKHNDL GRD+YHHT
Sbjct: 32 VPHDDPTLMFTNAGMNQFKAIFLGDNPKGWKRACNSQKCLRVSGKHNDLDVVGRDNYHHT 91
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK++A A E LT+ LP +RL+ T
Sbjct: 92 FFEMLGNWSFGDYYKKEAISWAWELLTE-VWKLPKERLFAT 131
>gi|330794423|ref|XP_003285278.1| alanyl-tRNA synthetase [Dictyostelium purpureum]
gi|325084730|gb|EGC38151.1| alanyl-tRNA synthetase [Dictyostelium purpureum]
Length = 944
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 254/820 (30%), Positives = 407/820 (49%), Gaps = 99/820 (12%)
Query: 16 SIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYP 70
IR +F+++F N HT V SS ++P+ D ++ F N+GM QFK +FLG + P A
Sbjct: 5 QIRKTFIEFFVNKAEHTFVPSSAVIPHDDPTLLFANAGMNQFKPIFLGQVNPKSEQAKLK 64
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF +Y+K++A A E LT+
Sbjct: 65 RAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGNYFKKEAISWAWELLTE-VY 123
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
L +RLY TYF G + GL D E +++WL+ +P + + GMK NFWEMG GPCG
Sbjct: 124 GLDKERLYVTYFRGDPEKGLEPDNEAKNLWLQY-LPEERVLPFGMKENFWEMGDQGPCGP 182
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIHYD K + VNAD LIEIWN+VFI R + ++ PL ++DTG+G E
Sbjct: 183 CSEIHYD-KVPGRNGAPFVNADDPTLIEIWNLVFIQFNREADKSLRPLPNKHVDTGMGLE 241
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSG-AKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
RL +I+Q + YDTD+F P+ E I++V+G +PYG + +D +YR+++D+ R
Sbjct: 242 RLTSIIQKVPTNYDTDVFKPIFEAIQEVTGYPEPYGGKVGAEDSQQVDMAYRVIADHIRT 301
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
++ ++AD P + LR ++R A+ + G K L + + G+ YPE
Sbjct: 302 LSFSIADGAAPSVDGRGQVLRRILRRAVRYGKQKLNAPAGFFSK-LVDVVVQNFGEFYPE 360
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
++ I+++L E +F+ + ++E++ ++K + GV
Sbjct: 361 LRKKPEHIRMVLTREEDMFNKTLEKGIQEFEKMIKKTTD--------------GV----- 401
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
+S A+ L G ++ +A K L + + FE+ E + +
Sbjct: 402 ----------LSAPNAYFLSTVCGFPIDLTTIMAEEKGLKVDIQGFEKLCEAQSEIDRKR 451
Query: 487 AASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
++ L + + +TDD +KY + T + I G +
Sbjct: 452 QKEKKTELTLGAEANAWLKNNNIKITDDSFKYQQKE-----------VQTTVKAIWNGKE 500
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
+D++ G++ + TN Y GGQI D+G L+ +
Sbjct: 501 F----------------VDTV--PKGQLCGIVLESTNFYPEQGGQIYDVG--QLSFVDDQ 540
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTP-GLTSRVE--VDARMRLGCMRAHTTSHLLN 656
++ + G ++H G + S++ T + +VE VD R M HT++H++N
Sbjct: 541 KTAFDVKDCKVFGGYVLHIGYL--SYECTELKVGDKVESTVDYTRRSPIMSNHTSTHMVN 598
Query: 657 AALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
AL+ VL Q+ V + DFS +G ++ D +A +++ +ND+I Q+ V +
Sbjct: 599 YALKSVLGEGIEQRGSFVDASRFRFDFS-FGRAVTKDELAKIDQIVNDLIFKQLNVYAQE 657
Query: 716 MRASELPFLTHLTVIPGEIYPD-----------DVILIDISDKENV-ISREPCCGTHVFN 763
+ ++ + L + GE+YPD D ++ + ++ E S E C GTH+ N
Sbjct: 658 VPLAKAKTINGLRAVFGEVYPDPVRVVSVGVPVDQLIENPTNAEWANYSIEFCGGTHLTN 717
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHL 803
T E T+I ++ GVR I +TG + AA E K L
Sbjct: 718 TKQAELFTIISEETLGAGVRRIVAVTGSEATAAHELNKEL 757
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG + P A R NSQKCIR GGKHNDL G+D
Sbjct: 29 IPHDDPTLLFANAGMNQFKPIFLGQVNPKSEQAKLKRAVNSQKCIRAGGKHNDLDDVGKD 88
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF +Y+K++A A E LT+ L +RLY T+
Sbjct: 89 TYHHTFFEMLGNWSFGNYFKKEAISWAWELLTE-VYGLDKERLYVTY 134
>gi|340517287|gb|EGR47532.1| predicted protein [Trichoderma reesei QM6a]
Length = 954
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 258/842 (30%), Positives = 413/842 (49%), Gaps = 91/842 (10%)
Query: 16 SIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP----- 70
+R +F D+F +GHTLV S +VP+ D ++ F N+GM QFK +FLG P
Sbjct: 9 QVRKTFFDFF-EQRGHTLVPSGSVVPHNDPTLLFTNAGMNQFKPIFLGTVNKSDPMSNLK 67
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R ++QK +R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K+DA MA E LTK
Sbjct: 68 RAVDTQKVIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKDAIEMAWELLTKV-Y 126
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
L RLY TYF G+ L D E +++W +GVP D I MK NFWEMG GPCG
Sbjct: 127 GLDPARLYVTYFEGNPALNLEPDLEAKELWKSVGVPEDQILPGNMKDNFWEMGDQGPCGP 186
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SE+HYD G ++A + VN D ++EIWN+VF+ R ++ PL +IDTG+GFE
Sbjct: 187 CSEVHYDKIGGRNAA-SLVNMDDPMVVEIWNLVFMQFDRQKDGSLKPLPAKHIDTGMGFE 245
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV+ LQ+ S Y TD F PL + IE+V+GA+PY + + +DT+YR+++D+ R +
Sbjct: 246 RLVSALQDTASNYATDCFTPLFKQIEEVTGARPYTDKYGADDADGIDTAYRVVADHIRTM 305
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+ A+ D P+ + +R ++R + + + G ++ + +G+ +P++
Sbjct: 306 SFAITDGAVPNNDGRGYVIRRILRRGVRYARKYLNAEIGSFFSKILPALVAQMGEQFPDL 365
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
I+ IL EE F + L + + + E++ +
Sbjct: 366 AKKQADIKEILDEEEEAFS----------RTLDRGEAQFERY---------------AAK 400
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
A+D ++ ++ GD+ + LYDT+G ++ + +A + L + + +E SKA
Sbjct: 401 AAKD-NVKKLDGDVVWRLYDTFGFPVDLTKLMAEERGLEIDEAEVAVAREKAREASKAVK 459
Query: 488 ASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI---D 544
S ++ F K D H LDT+L D +
Sbjct: 460 DS---------VQTFA------KLDVH--------KIAELDTDLKVSRTNDDAKYLKGDS 496
Query: 545 KHAIRHARSGASI--DSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
K +++ G S + + N +G++ D+TN YA +GGQ+ D G + + +
Sbjct: 497 KGKVQYIFDGKSFLKSTKDIPANTAIGVLLDQTNFYAESGGQVADTGRIVIDDVVE---- 552
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
++ ++ G I+H G + +++ G E D R HT +H+LN +LR V
Sbjct: 553 FKVIDVQDYGGYILHSG-YIEYGELSSGDEVICEYDELRRSPIRNNHTGTHILNHSLREV 611
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L +QK V +++ DFS + + +D + +E+ N I ++ + +
Sbjct: 612 LGDDVHQKGSLVDNEKLRFDFS-HKTQVKLDELKKIEELSNQDIRANAKIYSKDVELDRA 670
Query: 722 PFLTHLTVIPGEIYPDDVILIDI--------SDKENVISR----EPCCGTHVFNTGHIES 769
+ L + GE YP+ V ++ I +D +N R E C GTHV TG I+
Sbjct: 671 LQIEGLRAVFGETYPNPVRVVSIGMDVDTLLADPKNPDWRKYSVEFCGGTHVEQTGLIKD 730
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILN-VGNIPYGDDSIAFV 828
++ G+R I TG+++ K F Q L+ + ++P+G + A V
Sbjct: 731 LVIVEESGIAKGIRRIIAYTGEAAHQVQREAK------LFEQKLDELESLPFGPEKEAQV 784
Query: 829 NS 830
+
Sbjct: 785 KA 786
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P R ++QK IR GGKHNDL G+D
Sbjct: 32 VPHNDPTLLFTNAGMNQFKPIFLGTVNKSDPMSNLKRAVDTQKVIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K+DA MA E LTK L RLY T+
Sbjct: 92 SYHHTFFEMLGNWSFGDYFKKDAIEMAWELLTK-VYGLDPARLYVTY 137
>gi|221502948|gb|EEE28658.1| alanyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
Length = 1037
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 273/844 (32%), Positives = 411/844 (48%), Gaps = 116/844 (13%)
Query: 15 KSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP---- 70
+++R ++L++F QGH + SSP++P GD+++ F+N+GM QFK +FLG P
Sbjct: 27 EAVRGAYLEFF-EAQGHLIYPSSPVIPRGDNTLLFINAGMNQFKPIFLGQIDRSSPLSKL 85
Query: 71 -RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP 129
RVA++QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+KR+A A + LT+
Sbjct: 86 RRVADTQKCIRAGGKHNDLEDVGKDVYHHTFFEMLGNWSFGDYFKREAIAWAWQLLTEV- 144
Query: 130 VSLPLDRLYFTYFGGSDQY-GLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
+P DRLY +YFGG + P DEE RDIWL+ +P + + G K NFWEM TGPC
Sbjct: 145 YKIPKDRLYASYFGGDPRLPSCPPDEEARDIWLQY-LPANRVLPFGAKENFWEMADTGPC 203
Query: 189 GYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
G SEIHYD + G +S+L VNAD ++EIWN+VF+ + R ++ PL +DTG+
Sbjct: 204 GPCSEIHYDRIGGRDASSL--VNADDPSVLEIWNLVFMQYNREKDGSLTPLPAPCVDTGM 261
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVS-GAKPYGRTFTTSNRTDLDTSYRMLSDY 306
G ER+ ++LQ+K S YDTDLF L + I ++S G +PYG ++ +D +YR+L+D+
Sbjct: 262 GLERVASVLQDKQSNYDTDLFTALFDKILELSPGLRPYGGKVGEEDKDMVDMAYRVLADH 321
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R +T A+AD P + LR ++R A+ + + +G K L + +LG+
Sbjct: 322 ARCLTAAIADGAEPSNEGRGYVLRRILRRAVRYARQTLGMAEGNFPK-LVPVVVSLLGET 380
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ + K+ IL +E + F V+ +K + N ++ G +
Sbjct: 381 FPEMKKNEEKVVRILLKEEQQFSRTLDNGVERFKKVA---------NSLQAKGQKV---- 427
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
G AFTLY TYG ++ Q +A L + E F++K + + S
Sbjct: 428 -------------FPGGEAFTLYSTYGFPLDLTQLMAEEVGLQVDAEEFKRKFDAHRAAS 474
Query: 484 -----KAKAASNV----PDID--LMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
K A V PD L + P TDD KY+++ + T ++
Sbjct: 475 ENTSFKQGGAGAVYALPPDQRHLLAQSRKVPPTDDSAKYEWNVMNQAALMTQDAVEA--- 531
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
I +V I R A ++ S E+ V +I DKT YA GGQI D+G
Sbjct: 532 -APIKAKVMAI-WDGKRFAPEVTAVASPTGEN--LVAVILDKTCFYAEQGGQIGDVGRLV 587
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
++ E V+ + I+H G+ +S + G VD R + HT +
Sbjct: 588 DLSSQAEFEVVDSQKSGDF---ILHIGS-MSKGTLREGTELVPAVDYVRRFRLAQHHTGT 643
Query: 653 HLLNAALRRVL---------------------------TCTYQKSCRVFSDECA------ 679
HLLN ALR VL +C +K D
Sbjct: 644 HLLNFALREVLIRKLRSGGKASANGDKREDTNGIRICESCLNEKELEDGEDIQQKGSLVE 703
Query: 680 ---LDFSVYGET-LSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIY 735
L F GE L + + AVE + D IA V + + + + L + GE+Y
Sbjct: 704 VKRLRFDYAGEKPLENEDIIAVENVVKDCIAQARPVHYKEVPLEQAMKIPGLRAVFGEVY 763
Query: 736 PDDVILIDIS-DKENVI-------------SREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
PD V ++ + D E+++ S E C GTH+ N + ++ +S G
Sbjct: 764 PDPVRVVSVGEDIESLVALADSSQPETPFASIELCGGTHLHNASQLSDFCILSEESVAKG 823
Query: 782 VRSI 785
VR +
Sbjct: 824 VRRV 827
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP GD+++ F+N+GM QFK +FLG P RVA++QKCIR GGKHNDL G+D
Sbjct: 51 IPRGDNTLLFINAGMNQFKPIFLGQIDRSSPLSKLRRVADTQKCIRAGGKHNDLEDVGKD 110
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+KR+A A + LT+ +P DRLY ++
Sbjct: 111 VYHHTFFEMLGNWSFGDYFKREAIAWAWQLLTE-VYKIPKDRLYASY 156
>gi|222612529|gb|EEE50661.1| hypothetical protein OsJ_30891 [Oryza sativa Japonica Group]
Length = 901
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 246/784 (31%), Positives = 388/784 (49%), Gaps = 102/784 (13%)
Query: 54 MCQFKNVFLGLTPAPYP-----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWS 108
M QFK VFLG P R N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWS
Sbjct: 1 MNQFKPVFLGTAAPDAPLGRLRRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
Query: 109 FNDYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRD 168
F DY+K +A A E LT+ LP DR+Y TYFGG +++GL D E+++IWL+ +P++
Sbjct: 61 FGDYFKEEAIGFAWELLTQV-YKLPTDRIYATYFGGDEKFGLAPDTESKNIWLKY-LPKE 118
Query: 169 HIKKEGMKCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHK 228
+ G K NFWEMG TGPCG +EIH+D G +A + VN D IEIWN+VFI
Sbjct: 119 KVLPFGCKDNFWEMGDTGPCGPCTEIHFDRVGNRDAA-SLVNNDDPTCIEIWNLVFIQFN 177
Query: 229 RVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSG--AKPYGR 286
R + T+ PL ++DTG+GFERL +ILQNK S YDTD+F+P+ + I +++G + Y
Sbjct: 178 READCTLRPLPAKHVDTGMGFERLTSILQNKMSNYDTDVFMPIFDAIHQLAGNGIQSYSG 237
Query: 287 TFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV 343
+ +D +YR+++D+ R ++ A+AD P + LR ++R A+ K
Sbjct: 238 KVGPEDVDKVDMAYRVVADHIRTLSFAIADGSQPGNEGREYVLRRILRRAVHFGHQKLKA 297
Query: 344 KQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQ 403
KQG L + +++GDV+PE++D+ KI+ I+ +E F+N +++K
Sbjct: 298 KQG-FFSSLVHVFVQLMGDVFPELKDNEKKIKDIIKDEEESFENTLAKGFEKFKKAAD-- 354
Query: 404 PELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAK 463
++ E G AF L+DTYG ++ + +
Sbjct: 355 -----------------------------AVKESGGTDAFVLWDTYGYPVDLTEVMGVDY 385
Query: 464 KLTLCHEAFEQKLNELKERSKA---KAASNVPDIDL-----MDLKHFPVTDDKYKYDYHY 515
L++ E F+ + E +++++ KA N +D + + TDD KY Y
Sbjct: 386 GLSVDREGFDAAMEEARQKARNARFKAGENSIVLDANATAQLRNQGLASTDDSPKYGYKD 445
Query: 516 DTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKT 575
+ + + + + V GD+ F GL+ + T
Sbjct: 446 NDSVVKAIYTG--SEYVSAASGDEDF---------------------------GLVLEST 476
Query: 576 NLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFK-VTPGLTSR 634
+ YA GGQI D G G + + G ++H G+ K ++ G
Sbjct: 477 SFYAEQGGQIYDTG-----KIEGSFGSFNVTNVQVFAGYVLHMGSFTKGSKALSVGDKVA 531
Query: 635 VEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDS 693
+VD R HT +H+LN ALR +L QK V ++ DFS +G+ + +
Sbjct: 532 CKVDYARRALIAPNHTCTHMLNFALREILGDHVDQKGSIVLPEKLRFDFS-HGKPVQPED 590
Query: 694 VAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDK-ENV-- 750
+ +E +N I ++++V R ++ ++ + L + GEIYPD V ++ + K E++
Sbjct: 591 LRKIESIVNQQIKDKLEVFAREIKLADAKRINGLRAVFGEIYPDPVRVVSVGRKVEDLLA 650
Query: 751 ---------ISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGK 801
IS E C GTH+ NT E+ ++ + GVR I +T + A+++
Sbjct: 651 NPESKEWLSISTELCGGTHIKNTSEAEAFALLSEEGIAKGVRRITAVTAKHASDAIKDAS 710
Query: 802 HLST 805
+ +
Sbjct: 711 SIDS 714
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 61/93 (65%), Gaps = 6/93 (6%)
Query: 832 MCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEMLGNWS 886
M QFK VFLG P R N+QKCIR GGKHNDL G+D+YHHTFFEMLGNWS
Sbjct: 1 MNQFKPVFLGTAAPDAPLGRLRRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
Query: 887 FNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
F DY+K +A A E LT+ LP DR+Y T+
Sbjct: 61 FGDYFKEEAIGFAWELLTQ-VYKLPTDRIYATY 92
>gi|344245235|gb|EGW01339.1| putative alanyl-tRNA synthetase, mitochondrial [Cricetulus griseus]
Length = 942
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 265/822 (32%), Positives = 400/822 (48%), Gaps = 139/822 (16%)
Query: 54 MCQFKNVFLGLTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWS 108
M QFK +FLG A + RVANSQKCVR GG+HNDL GRD HHTFFEMLGNW+
Sbjct: 1 MNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWA 60
Query: 109 FN-DYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPR 167
F +Y+K +AC MA E LT+ +P DRL+ +YFGG + GL D ETRD+WL LGVP
Sbjct: 61 FGGEYFKEEACGMAWELLTQV-YGIPEDRLWVSYFGGDTKTGLAPDLETRDVWLSLGVPA 119
Query: 168 DHIKKEGMKCNFWEMGSTGPCGYSSEIHYDMK---GEPSSALARVNADRNDLIEIWNIVF 224
+ G++ NFWEMG TGPCG +EIHYD+ G P L+E+WN+VF
Sbjct: 120 SRVLSFGLQENFWEMGDTGPCGPCTEIHYDLAEGVGAP------------QLVELWNLVF 167
Query: 225 ISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPY 284
+ H R + ++ PL + ++DTG+G ERLV +LQ + STYDTDLF PLL I + G +PY
Sbjct: 168 MQHCREAGGSLQPLPQRHVDTGMGLERLVAVLQGRRSTYDTDLFSPLLSAIHQGCGVRPY 227
Query: 285 GRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVF 341
++ +DT+YR+++D+ R ++V +AD +FP + LR ++R A+ S +V
Sbjct: 228 SGRVGPADEGRIDTAYRVVADHIRTLSVCIADGVFPGMSGAPLILRRILRRAVRFSTEVL 287
Query: 342 KVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVK 401
+ G + L + E LG YPE+Q + +I ++ E+ F A+++ + ++
Sbjct: 288 RAPPG-FLGSLVPVVVETLGAAYPELQKNSAQIASLVSEDEAAF----LASLQRGRRIID 342
Query: 402 TQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAA 461
VK L D E++ + +L G+ ++++ +
Sbjct: 343 RT-----------------VKRLGPS---DLFPAEVA--WSLSLSGNLGIPLDLVELMLE 380
Query: 462 AKKLTLCHEAFEQKLNELKERSKAKAASNVPD----IDLMDLKHF-----PVTDDKYKYD 512
K + L E+ L + + + +A+ A VP+ +D+ L+ P TDD KY+
Sbjct: 381 EKGVQLDTAGLEE-LAQKEAQHRAQQAEPVPEEGLCLDVHTLEELHRHGVPPTDDSPKYN 439
Query: 513 YHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIF 572
Y N Y F + ++ Q++ D A+ AS+ + Q GL+
Sbjct: 440 YSLQPNGD-YEFGLCEAQVL------QLYSEDGTAV------ASVGAGQR-----CGLLL 481
Query: 573 DKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVH--------------- 617
D+TN YA GGQ D G YL T Q++ + G I+H
Sbjct: 482 DRTNFYAEQGGQASDRG--YLVRTGQQDVLFPVARAQVCGGFILHEAVATECLQVGEQVQ 539
Query: 618 -FGNVVSSFKVTPGLTSR-----------------VEVDARMRLGCMRAHTTSHLLNAAL 659
+ + V S PGL+ +V R+GCM HT +HLL+ AL
Sbjct: 540 LYVDEVRSLPPCPGLSKYPAAPLPLHSYPHPGLWVTKVFQAWRMGCMVKHTATHLLSWAL 599
Query: 660 RRVLTCTYQKSCRVFSDECALDFSVYGET-LSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R+ L T ++ + E L F V + L+ + + VE Y+ + + + +
Sbjct: 600 RKTLGPTTEQRGSHLNPE-RLRFDVATQAPLTTEQLRTVESYVQEAVRQD-----KAVYM 653
Query: 719 SELPFLTHLTVIPG-----EIYPDDV-----------ILIDISDKENVISREPCCGTHVF 762
E+P L H +PG E+YPD V L S S E CCGTH+
Sbjct: 654 EEVP-LAHTAHVPGLRSLDEVYPDPVRVVSVGVPVAHALAPDSQAALQTSVELCCGTHLL 712
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
TG + +IG + G+ + +TG+ ++ A E G+ LS
Sbjct: 713 RTGAMGDLVIIGGRQLVKGITRLLAITGEQAQQARELGQSLS 754
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 64/94 (68%), Gaps = 7/94 (7%)
Query: 832 MCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEMLGNWS 886
M QFK +FLG A + RVANSQKC+R GG+HNDL GRD HHTFFEMLGNW+
Sbjct: 1 MNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWA 60
Query: 887 F-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
F +Y+K +AC MA E LT+ +P DRL+ ++
Sbjct: 61 FGGEYFKEEACGMAWELLTQ-VYGIPEDRLWVSY 93
>gi|261415443|ref|YP_003249126.1| alanyl-tRNA synthetase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371899|gb|ACX74644.1| alanyl-tRNA synthetase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 882
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 264/817 (32%), Positives = 394/817 (48%), Gaps = 112/817 (13%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP 70
++ S +R SF+ +F ++GH V+SSP+VP+ D ++ F N+GM QFK +FLG P +
Sbjct: 4 KMTSAQVRESFIKFF-ESKGHLFVRSSPVVPHDDPTLMFTNAGMNQFKAIFLGDNPKGWK 62
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R NSQKC+RV GKHNDL GRD+YHHTFFEMLGNWSF DYYK++A A E LT+
Sbjct: 63 RACNSQKCLRVSGKHNDLDVVGRDNYHHTFFEMLGNWSFGDYYKKEAISWAWELLTE-VW 121
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCG 189
LP +RL+ T + D+E IW ++ G+P D I + NFWEMG TGPCG
Sbjct: 122 KLPKERLFATVY--------QDDDEAWQIWKDVSGLPDDRIMRFDAHSNFWEMGDTGPCG 173
Query: 190 YSSEIHYDMKGEPSSA------LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYI 243
SEIHYD + A + VN + + IEIWN VF+ ++RVS +++PL +
Sbjct: 174 PCSEIHYDRGDLATQAETFKDPIKGVNGENDRYIEIWNNVFMQYERVSDGSLIPLKAKNV 233
Query: 244 DTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRML 303
D G+GFER+ ILQ KTS YDTD+F P++ I ++SG PY N + T +R++
Sbjct: 234 DIGMGFERICAILQGKTSNYDTDVFTPIIAKIAELSGV-PY-------NDGEAGTPHRVI 285
Query: 304 SDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL 360
+D+ R I+ A+AD P + LR ++R A + + + K + +L +A+ +
Sbjct: 286 ADHIRAISFAIADGALPSNEGRGYVLRRILRRASRFARLLGQKK--PFICQLVQVLADTM 343
Query: 361 GDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
GD +PEI++ + ++ E F A ++ + + EL++ +
Sbjct: 344 GDAFPEIRERKEFVASVIKSEEESFIRTLDAGLERFAAI---SAELKKGD---------- 390
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
+I GD F LYDTYG ++ LA K L + E +E+ +NE K
Sbjct: 391 ---------------KIPGDKVFLLYDTYGFPPDLTGILAEEKGLLIDEEGYEKCMNEQK 435
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
ER++A + + T+ +Y TN Y +T +V
Sbjct: 436 ERARANMKQGINTMG---------TEGWTQYS-EASTNFVGYELSACETKVV-------- 477
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN-TTQE 599
R + SI LE + YA GGQ+ D G + Q
Sbjct: 478 ---------RWREDKGVLSIVLE----------TSPFYAEMGGQVGDKGTLVSADLEIQV 518
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
V++ + A GK+V + + T G VD R + H+ +HLL AAL
Sbjct: 519 FDTVKVNDTALCRGKVVKG----EANEKTMGAVFMATVDNDRRADIRKNHSATHLLQAAL 574
Query: 660 RRVLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R VL Q+ S+E DFS + ++ + + VE +N I + V M
Sbjct: 575 REVLGTHVQQQGSFVSNELLRFDFSHF-NAMTAEEIQKVEDIVNAKIMECLPVHTDVMDV 633
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
E + + GE Y D V ++ + D SRE C G HV NTG+I ++ S
Sbjct: 634 DEAKASGAMALF-GEKYGDKVRVVKMGDAGVEFSRELCGGLHVQNTGNIGMVKIVSESSV 692
Query: 779 NHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNV 815
+ GVR I+ ++G + LS + +QILN
Sbjct: 693 SAGVRRIEAVSGRGA---------LSLLRAGTQILNA 720
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK +FLG P + R NSQKC+RV GKHNDL GRD+YHHT
Sbjct: 32 VPHDDPTLMFTNAGMNQFKAIFLGDNPKGWKRACNSQKCLRVSGKHNDLDVVGRDNYHHT 91
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK++A A E LT+ LP +RL+ T
Sbjct: 92 FFEMLGNWSFGDYYKKEAISWAWELLTE-VWKLPKERLFAT 131
>gi|373958617|ref|ZP_09618577.1| alanyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
gi|373895217|gb|EHQ31114.1| alanyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
Length = 927
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 264/820 (32%), Positives = 409/820 (49%), Gaps = 108/820 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ ++ IR +FLD+F ++GHT+V S+PIV D ++ F N+GM QFK++FLG P +PR
Sbjct: 1 MTAQEIRQAFLDFFA-SKGHTIVPSAPIVVKNDPTLMFTNAGMNQFKSIFLGEEPVKFPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++Q+C+RV GKHNDL G DSYHHT FEMLGNWSF DY+K++A + E LT+
Sbjct: 60 VADTQRCLRVSGKHNDLEEVGIDSYHHTMFEMLGNWSFGDYFKKEAIAWSWELLTE-IYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L RLY TYF G ++ GL D ET ++W E V DHI K NFWEMG TGPCG
Sbjct: 119 LDKSRLYVTYFEGDEKEGLAADTETLELWREF-VADDHILPGNKKDNFWEMGETGPCGPC 177
Query: 192 SEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIHYD + + A VN + ++EIWN VF+ R+ ++ PL ++DTG+
Sbjct: 178 SEIHYDGRTDAERAQIDGATLVNGVDDSVMEIWNDVFMQFNRLKDGSLQPLPAKHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSG---------AKPYGRTFTTSNRTDL-- 296
GFERLV I+Q KTS YDTD+F PL++ I + SG +K G S L
Sbjct: 238 GFERLVRIMQGKTSNYDTDVFQPLIQFIAEKSGIVYGPHPALSKGEGSDLQASEAHALKV 297
Query: 297 ------------DTSYRMLSDYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVF 341
D + R+++D+ R I+ A+AD P A +R ++R A+ S
Sbjct: 298 LSFGEDLVEAKTDVAMRVMADHIRAISFAIADGQLPSNNKAGYVIRRILRRAVRYSYQYL 357
Query: 342 KVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVK 401
K+ + +L +A+ V+ E+ + + +Q ++ EE F + +++ ++
Sbjct: 358 NFKE-PFLNQLVPILAQQFVGVFTELVNQKDFVQKVVLEEEVAFLRTLDRGINKFEEFIQ 416
Query: 402 TQP-ELEQF-NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQEL 459
+ E+E N+ + L + +D T I G+ AF L DTYG ++ + +
Sbjct: 417 KEAQEIELIKNLANDSSSSLPTAF------KDSKTTIIRGNFAFELSDTYGFPLDLTELM 470
Query: 460 AAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNS 519
A T+ E +E L + K RS+A A + D L+ DD ++ + +T +
Sbjct: 471 AREIGWTVDVEGYETALAQQKSRSRAATAIDTGDWILLK------EDDTVEFVGYTETET 524
Query: 520 KRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYA 579
H +++ + ++ + ++ DKT YA
Sbjct: 525 I------------------------AHVVKYRK-------VKAKGKEQYQIVLDKTPFYA 553
Query: 580 TAGGQIDDIG--------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGL 631
+GGQ+ D G + +T+T +EN G IVHF + + + L
Sbjct: 554 ESGGQVGDTGELIFPDGEIVPVTDTKKEN------------GLIVHFVDQLPE-DIDDAL 600
Query: 632 TSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLS 690
T+ V+VD R H+ +HLL+AAL+ VL + QK V ++ DFS + + ++
Sbjct: 601 TAMVDVDKRK--ATNNNHSATHLLHAALKEVLGSHVNQKGSLVNNEYLRFDFSHFSK-VT 657
Query: 691 VDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENV 750
+ +A +E +N+ I + VD + + E + GE Y D V ++ + K
Sbjct: 658 DEEIARIEAIVNERIRENILVDIQELPKEE-AIAMGANALFGEKYGDTVRVVTMDMK--- 713
Query: 751 ISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
S E C GTHV +TG I +I + GVR I+ +TG
Sbjct: 714 FSIELCGGTHVQSTGQIGFFKIIAESAVAAGVRRIEAITG 753
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++FLG P +PRVA++Q+C+RV GKHNDL G DSYHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKSIFLGEEPVKFPRVADTQRCLRVSGKHNDLEEVGIDSYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
LGNWSF DY+K++A + E LT+ L RLY T+
Sbjct: 92 LGNWSFGDYFKKEAIAWSWELLTE-IYKLDKSRLYVTY 128
>gi|408389623|gb|EKJ69061.1| hypothetical protein FPSE_10760 [Fusarium pseudograminearum CS3096]
Length = 957
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 253/816 (31%), Positives = 402/816 (49%), Gaps = 92/816 (11%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPA 67
S ++ + +R +F +YF +GHT+V SS +VP+ D ++ F N+GM QFK +FLG
Sbjct: 4 SELKWPAARVRKTFFEYF-EQRGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTVGK 62
Query: 68 PYPRVA-----NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMAL 122
P + +SQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A +
Sbjct: 63 TDPMASLKAAVDSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAISYSW 122
Query: 123 EFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEM 182
E LTK L RLY TYF G ++ L D E +++W+ +GVP DHI MK NFWEM
Sbjct: 123 ELLTKV-YGLDPSRLYVTYFEGDEKLKLEPDLEAKELWISVGVPEDHILPGNMKDNFWEM 181
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
G GPCG SEIHYD G +A + VN D ++E+WN VF+ + R ++ L +
Sbjct: 182 GDQGPCGPCSEIHYDKVG-GRNASSLVNMDDPMVVEVWNNVFMQYDRQKDGSLKSLPAKH 240
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRM 302
IDTG+G+ERLV+ LQ+ S Y TD F PL + I++V+GA+PY + + +DT+YR+
Sbjct: 241 IDTGMGYERLVSALQDTVSNYATDCFTPLFQKIQEVTGARPYTDKYGKDDADGVDTAYRV 300
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI 359
++D+ R ++ ++AD P+ + +R V+R + + F G ++ + +
Sbjct: 301 VADHIRTLSFSIADGAVPNNDGRGYVIRRVLRRGVRYARKYFNADIGAFFSKILPALVDQ 360
Query: 360 LGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
+G+ +PE+ I+ IL EE F K L + + + E++
Sbjct: 361 MGEQFPELVKKQQDIKEILDEEEVAFA----------KTLDRGEAQFEKY---------- 400
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
TK A+ ++ GD+ + LYDT+G ++ + +A + L + E + ++
Sbjct: 401 -AAEATKNGAK-----KLQGDVVWRLYDTFGFPVDLTRLMAEERNLEIDDEEVKAAQDKA 454
Query: 480 KERSKAKAAS-------NVPDIDLM--DLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
+E SKA S NV I + DLK DD F D+N
Sbjct: 455 REASKAVKESVQTFAKLNVHQISELEKDLKVERTNDDA--------------KFLLGDSN 500
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
+I D + + + +GL+ DKTN YA +GGQ+ D G
Sbjct: 501 AQVQLIYDGTSFLKS-------------TKDVSEKTALGLLIDKTNFYAESGGQVADTGR 547
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ + + ++ ++ + G I+H G + ++ G E D R H+
Sbjct: 548 IVIDDVAE----FKVLDVQNYGGYILHNG-YIEYGTLSSGDKVICEYDELRRSPIRNNHS 602
Query: 651 TSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H+LN +LR VL QK V SD+ DFS + + ++ + +E+ N+ I
Sbjct: 603 GTHILNHSLREVLGDEVNQKGSLVDSDKLRFDFS-HKTGVKIEELKKIEEMSNEYIRRGQ 661
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CC 757
++ + + + + + GE YPD V ++ I + + +P C
Sbjct: 662 KIYSKEVDLEKARQIEGCRAVFGETYPDPVRVVSIGKDIDEMLADPKKPEWRQYSVEFCG 721
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
GTHV TG I+ +I G+R I TG+++
Sbjct: 722 GTHVEQTGLIKDLILIEESGIAKGIRRIIAYTGEAA 757
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA-----NSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P + +SQKCIR GGKHNDL G+D
Sbjct: 35 VPHNDPTLLFTNAGMNQFKPIFLGTVGKTDPMASLKAAVDSQKCIRAGGKHNDLDDVGKD 94
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK L RLY T+
Sbjct: 95 SYHHTFFEMLGNWSFGDYFKKEAISYSWELLTK-VYGLDPSRLYVTY 140
>gi|320588479|gb|EFX00948.1| alanyl-tRNA synthetase [Grosmannia clavigera kw1407]
Length = 1117
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 256/809 (31%), Positives = 400/809 (49%), Gaps = 95/809 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----R 71
+R +FL+YF +GHT+V SS +VP+ D ++ F N+GM QFK +FLG P R
Sbjct: 168 VRQTFLEYF-EKKGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTVAKADPLSSLKR 226
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
++QKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A M+ + LT
Sbjct: 227 AVDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEMSWDLLTNV-YG 285
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L RLY TYF G+ GL D E +++WL +GVP DHI MK NFWEMG GPCG
Sbjct: 286 LDPARLYVTYFEGNPAMGLEPDLEAKNLWLSVGVPEDHILPGNMKDNFWEMGDQGPCGPC 345
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SE+HYD G +A + VN D ++E+WN VFI R ++ L ++DTG+GFER
Sbjct: 346 SEVHYDKVGGGRNASSLVNQDDPLVVEVWNNVFIQFDRQQDKSLKSLPAKHVDTGMGFER 405
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV+ LQ+K S Y TD+F PL + I++V+GA+PY + + +DT+YR+++D+ R++T
Sbjct: 406 LVSALQDKISNYATDIFTPLFDRIQEVTGARPYTDKYGKDDVDGIDTAYRVVADHIRLLT 465
Query: 312 VALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
++AD P+ +R V+R + + F + G ++ + + +G +PEI
Sbjct: 466 FSMADGAVPNNDGRGYVVRRVLRRGVRYARKYFGAEIGSFFSQILPALVDQMGHQFPEIA 525
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
I+ IL EE F + L + + + E++
Sbjct: 526 KKQKDIKEILDEEEEAFS----------RTLDRGERQFEKY---------------AAAT 560
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAA-------AKKLTLCHEAFEQKLNELKE 481
A+ + T +SG + LYDT+G +++ Q +A A+++ + E + +KE
Sbjct: 561 AKSGAKT-LSGADVWRLYDTFGFPEDLTQLMAEERGLSIDAEEVAVARERAREASKSVKE 619
Query: 482 RSKAKAASNVPDIDLMDLKH---FPVTDDKY-KYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
+ A NV I ++ +H P ++ KY + D H R T V
Sbjct: 620 AVQTFAKLNVHQIAELENEHKIVRPSSEAKYLRGDLH-----SRVELIYTGTGFVKT--- 671
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
+ + N +G++ DKTN YA +GGQ+ D G + +
Sbjct: 672 ---------------------TKDIPANTPLGILVDKTNFYAESGGQVADTGRIVIDDVA 710
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+ ++ ++ G +VH G + +++ G E + R HT +H+LN
Sbjct: 711 E----FKVLDVQEYGGYVVHNG-YLEYGELSSGDNVICEYEELRRAPIRNNHTGTHVLNH 765
Query: 658 ALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL QK V D+ DFS + +S+ + +E+ N I ++V + +
Sbjct: 766 ALREVLGDDVNQKGSLVDQDKLRFDFS-HKSAVSLAEIKKIEELANANIQRNLKVFYKDV 824
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFNT 764
+ + + + GE YPD V ++ + + + R P C GTHV T
Sbjct: 825 DLASAREIEGVRAVFGETYPDPVRVVSVGVDVDELLRTPKKAEWRGYSVEFCGGTHVEQT 884
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
G I+ V+ G+R I TGD++
Sbjct: 885 GLIKDVVVVEESGIAKGIRRIVAYTGDAA 913
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P R ++QKCIR GGKHNDL G+D
Sbjct: 190 VPHNDPTLLFTNAGMNQFKPIFLGTVAKADPLSSLKRAVDTQKCIRAGGKHNDLDDVGKD 249
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A M+ + LT L RLY T+
Sbjct: 250 SYHHTFFEMLGNWSFGDYFKKEAIEMSWDLLTN-VYGLDPARLYVTY 295
>gi|400603042|gb|EJP70640.1| tRNA synthetase class II [Beauveria bassiana ARSEF 2860]
Length = 1052
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 261/856 (30%), Positives = 415/856 (48%), Gaps = 96/856 (11%)
Query: 5 NISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGL 64
+++ + + +R +FLD+F +GHT+V S +VP+ D ++ F N+GM QFK +FLG
Sbjct: 95 KMATETKWPAAKVRETFLDFF-EKRGHTIVPSGSVVPHNDPTLLFTNAGMNQFKPIFLGT 153
Query: 65 TPAPYP-----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACR 119
P R ++QK +R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 154 VGKTDPMANMKRAVDTQKVIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIE 213
Query: 120 MALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNF 179
MA E LTK L +RLY TYF GS + GL D E +++W LGVP + I MK NF
Sbjct: 214 MAWELLTKV-YGLDPERLYVTYFEGSSELGLDPDLEAKELWHALGVPYERILPGDMKDNF 272
Query: 180 WEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLS 239
WEMG GPCG SEIHYD G +A + VN D ++EIWN+VF+ R ++ L
Sbjct: 273 WEMGDQGPCGPCSEIHYDKVGGGRNAASLVNMDDPMVVEIWNLVFMQFDRQKDRSLKSLP 332
Query: 240 KNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTS 299
+IDTG+G+ERLV+ LQ+ S Y TD F PL + IE V+G +PY + + +DT+
Sbjct: 333 AKHIDTGMGYERLVSALQHTISNYATDCFTPLFKQIETVTGVRPYTDKYGKDDVDGIDTA 392
Query: 300 YRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLISEDVFK---VKQGKLVKELSYNI 356
YR+++D+ R ++ A+ D P++ + V R K + G ++ +
Sbjct: 393 YRVIADHIRTLSFAITDGAVPNSDGRGYVVRRVLRRGVRYARKYLNAEVGSFFSKILPAL 452
Query: 357 AEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
E +G +P++ I+ IL EE F + L + + + E++
Sbjct: 453 VEQVGGQFPDLVKKQEDIKEILDEEEEAFS----------RTLDRGEAQFEKY------- 495
Query: 417 LVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKL 476
+ A+D ++ ++ GD+ + LYDT+G ++ + +A + L + E
Sbjct: 496 --------AAKAAKD-NVKKLDGDVVWRLYDTFGFPVDLTKLMAEERGLEIDEAEVEVAK 546
Query: 477 NELKERSKAK-------AASNVPDIDLMDLKH-FPVTDDKYKYDYHYDTNSKRYTFPCLD 528
+ +E SKA A NV I ++ +H P T+D+ K+ D+ K
Sbjct: 547 EKAREASKAVKDAAATFAKLNVHQIAELEQQHKLPRTNDESKF-VKGDSKGK-------- 597
Query: 529 TNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI 588
+ I+ Q F + L +GL+ D+TN YA +GGQI D
Sbjct: 598 ---IQIIFDGQTF--------------HKSTKDLPPKTAIGLLLDQTNFYAESGGQIADT 640
Query: 589 GVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA 648
G + + + ++ ++ + G ++H G + ++ G E D R
Sbjct: 641 GRIVIDDVAE----FKVMDVQNFGGYVLHSG-YIEYGALSSGDEVICEYDELRRSPIRNN 695
Query: 649 HTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
H+ +H+LN ALR VL QK V ++ DFS + + +D + +E N I
Sbjct: 696 HSGTHILNHALREVLGDDINQKGSLVDDEKLRFDFS-HKAQVKLDELKKIEDLSNAYIRK 754
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------ 755
+V + + + + + GE YP+ V ++ I + + EP
Sbjct: 755 SCKVFSKDVDLDLAREIEGVRAVFGETYPNPVRVVSIGMDIDTMLAEPKKADWRKYSVEF 814
Query: 756 CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILN- 814
C GTHV TG I+ ++ G+R I TG+++ + AA FS+ L+
Sbjct: 815 CGGTHVEQTGLIKDLLIVEESGIAKGIRRIIAYTGEAAH------RIQREAAEFSKTLDA 868
Query: 815 VGNIPYGDDSIAFVNS 830
+ +P+G + A V +
Sbjct: 869 LDALPFGPEKEAQVKT 884
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P R ++QK IR GGKHNDL G+D
Sbjct: 129 VPHNDPTLLFTNAGMNQFKPIFLGTVGKTDPMANMKRAVDTQKVIRAGGKHNDLDDVGKD 188
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A MA E LTK L +RLY T+
Sbjct: 189 SYHHTFFEMLGNWSFGDYFKKEAIEMAWELLTK-VYGLDPERLYVTY 234
>gi|291513841|emb|CBK63051.1| alanyl-tRNA synthetase [Alistipes shahii WAL 8301]
Length = 873
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 259/790 (32%), Positives = 391/790 (49%), Gaps = 98/790 (12%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
S IR +FLD+F ++GH +V S+P+V GD ++ F N+GM QFK++FLG P YPR A
Sbjct: 3 SNKIRQAFLDFF-ESKGHAIVPSAPMVVKGDPTLMFTNAGMNQFKDIFLGNAPRKYPRAA 61
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
++QKC+RV GKHNDL G D+YHHT FEMLGNWS+ DY+K++A A E L LP
Sbjct: 62 DTQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSYGDYFKKEAIEWAWELL-HGVYGLP 120
Query: 134 LDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSE 193
+R+Y T F GS++ G+P D+E D WL +P DHI + NFWEMG TGPCG SE
Sbjct: 121 AERMYATVFEGSEEDGVPFDQEAYDYWLRY-LPADHIIRGNKHDNFWEMGETGPCGPCSE 179
Query: 194 IHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
IH+D++ E A VNA +IEIWN+VF+ R + ++ L +DTG+GF
Sbjct: 180 IHFDLRDEAEIAAKPGREMVNASHPQVIEIWNLVFMQFNRKANGSLEELPARNVDTGMGF 239
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERL ILQ K S YDTD+F P + I ++SG K YG D + R+++D+ R
Sbjct: 240 ERLCMILQGKKSNYDTDVFQPTIGRIAEMSGKK-YGED------RKADVAMRVIADHLRA 292
Query: 310 ITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
I ++AD P A +R ++R A+ + L + L + +G +PE
Sbjct: 293 IAFSIADGQLPSNVKAGYVIRRILRRAVRYGYTYLGFTEPTLCR-LVPGLVGQMGGQFPE 351
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
++ I+ ++ EE F LR A N+++ G++ K K
Sbjct: 352 LKAQQGLIEKVIEEEESSF--LRTLATG--------------INLLD--GVISRTKGEGK 393
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
+L ISG AF LYDT+G ++ + +A + + + AFE++L KERS+
Sbjct: 394 EL--------ISGKDAFELYDTFGFPIDLTELIAREQGVGVDLAAFEKELQAQKERSRNA 445
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
AA + D ++ FP+ + + YDT +++
Sbjct: 446 AAVDTDDW----VELFPIRESVFT---GYDTLTEK------------------------- 473
Query: 547 AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIG 606
+R AR + + L+FD+T Y +GGQ+ DIG+ N ++ +
Sbjct: 474 -VRIARYRRVTSKGKTSYQ----LVFDRTPFYGNSGGQVGDIGM-----IESANERIPVV 523
Query: 607 ELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTC- 665
G I+H +V+ P VD R HT +HL++ ALR+VL
Sbjct: 524 ATEKENGLIIH---IVNQLPENPAAEFTARVDPEKRQAAANNHTATHLMHEALRKVLGAH 580
Query: 666 TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMRASELPFL 724
QK V + DFS + + ++ + + VE+ +N I AN V+ R E
Sbjct: 581 VEQKGSLVTPEILRFDFSHF-QKVTPEELRKVEQLVNRAIRANYPLVENREATKEEAEKC 639
Query: 725 THLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRS 784
+ + GE Y D V ++ S E C GTH TG+I ++ + + GVR
Sbjct: 640 GAMMLF-GEKYGDKVRMVRFGS-----SVELCGGTHTGATGNIGFFKILSESAISAGVRR 693
Query: 785 IKCLTGDSSK 794
I+ +TG+ ++
Sbjct: 694 IEAVTGEQAE 703
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++FLG P YPR A++QKC+RV GKHNDL G D+YHHT FE
Sbjct: 31 GDPTLMFTNAGMNQFKDIFLGNAPRKYPRAADTQKCLRVSGKHNDLEEVGHDTYHHTMFE 90
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWS+ DY+K++A A E L LP +R+Y T
Sbjct: 91 MLGNWSYGDYFKKEAIEWAWELL-HGVYGLPAERMYAT 127
>gi|327304957|ref|XP_003237170.1| alanyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
gi|326460168|gb|EGD85621.1| alanyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
Length = 934
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 273/829 (32%), Positives = 395/829 (47%), Gaps = 114/829 (13%)
Query: 4 PNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG 63
P V + +R +FLDYF GHT P NS Q K
Sbjct: 10 PAGQQTVEWPALRVRDTFLDYF-EKNGHTFGTVDP------------NSDFAQLK----- 51
Query: 64 LTPAPYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALE 123
R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + + E
Sbjct: 52 -------RAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIQFSWE 104
Query: 124 FLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMG 183
LTK L DRLY TYF G++ G+ D E RDIW +GV DHI MK NFWEMG
Sbjct: 105 LLTKV-YGLDPDRLYVTYFEGNEAAGVGPDIEARDIWRSVGVKDDHILTGDMKDNFWEMG 163
Query: 184 STGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYI 243
GPCG SEIHYD G ++A VN D D++EIWN VFI + R ++ PL ++
Sbjct: 164 DQGPCGPCSEIHYDRIGGRNAAHL-VNQDDPDVLEIWNNVFIQYNREPDRSLRPLPNQHV 222
Query: 244 DTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRML 303
DTGLG+ERLV+ILQNK+S YDTD+F PL I+ ++GA+PY F + +DT+YR++
Sbjct: 223 DTGLGYERLVSILQNKSSNYDTDVFTPLFTAIQNITGARPYTGKFGAEDADGIDTAYRVV 282
Query: 304 SDYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL 360
+D+ R +T A+ D P+ +R V+R + + +V+ G +L + E +
Sbjct: 283 ADHLRTLTFAITDGAAPNNEGRGYVVRRVLRRGVRYARKYLQVEIGSFFSKLVPALVEQM 342
Query: 361 GDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
GD++PEI+ + IL EE F K L + + + E +
Sbjct: 343 GDMFPEIRRKQTDVMEILDEEEVSFA----------KTLDRGERQFENY----------- 381
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
Q A D ++ G + LYDT+G ++ + +A ++LT+ FE+ + K
Sbjct: 382 -----AQQALDSGAGKLHGADVWRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEARLKAK 436
Query: 481 ERSK--AKAASN-----VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
E SK AK AS+ V + ++ P TDD K+
Sbjct: 437 EASKGQAKTASDLLKLTVHTLSTLEKNGVPKTDDDAKF------------------GKGN 478
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
IV + C K I + + N +G+I DKTN YA GGQ D G +
Sbjct: 479 IVANIKAICHGKEVIDSTKD--------IPANEQIGIILDKTNFYAEQGGQEYDTGKIVI 530
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+ +++ + G ++H G + +F V + + E D R HT +
Sbjct: 531 DGQAE----LDVQNVQMYGGYVLHTGFIKYGNFSVNDSVIA--EYDELRRWPIRNNHTGT 584
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
H+LN ALR VL QK V +++ DFS + +S + +E D I V
Sbjct: 585 HILNFALREVLGDGVDQKGSLVAAEKLRFDFS-HKSAISDSDLEKIEAKSTDYIRQNCAV 643
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISD-KENVISREPCCGT 759
+ + + +T + + GE YPD D IL ++ D + +S E C GT
Sbjct: 644 YSQEVPLATAREITGVRAVFGETYPDPVRVVSVGVELDEILKNVKDPRWEGVSIEFCGGT 703
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHLS 804
HV TG I+ ++ G+R I +TG+ + + A E G+ L+
Sbjct: 704 HVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQRIAREFGERLN 752
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 845 APYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 904
A R NSQKCIR GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + + E LT
Sbjct: 48 AQLKRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIQFSWELLT 107
Query: 905 KPPVSLPLDRLYFTF 919
K L DRLY T+
Sbjct: 108 K-VYGLDPDRLYVTY 121
>gi|444314227|ref|XP_004177771.1| hypothetical protein TBLA_0A04580 [Tetrapisispora blattae CBS 6284]
gi|387510810|emb|CCH58252.1| hypothetical protein TBLA_0A04580 [Tetrapisispora blattae CBS 6284]
Length = 954
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 266/815 (32%), Positives = 395/815 (48%), Gaps = 94/815 (11%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + ++++RS+FLDYF + HT V SSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQKWTAENVRSTFLDYF-KSNNHTFVPSSPVVPFDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
P+ R NSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K A
Sbjct: 62 DPSSDFYSLKRAYNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKEGAITF 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
A LTK S+P +RLY TYF G GL D E + +WL GVP DHI NFW
Sbjct: 122 AWNLLTKV-YSIPSERLYVTYFEGDASQGLEPDLEAKQLWLNAGVPEDHILPGDTHDNFW 180
Query: 181 EMGSTGPCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLS 239
EMG GPCG SEIHYD + G +S+L VN D D++EIWN+VF+ R S ++ L
Sbjct: 181 EMGEQGPCGPCSEIHYDRIGGRNASSL--VNQDDPDVLEIWNLVFMQFNRESDHSLKKLP 238
Query: 240 KNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTS 299
++DTG+GFERLV++LQ+ S YDTD+F PL I+++ +PY F ++ +DT+
Sbjct: 239 ACHVDTGMGFERLVSVLQDVRSNYDTDVFQPLFTRIQEICNVRPYSGKFGAEDKDGIDTA 298
Query: 300 YRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNI 356
YR+L+D+ R +T ++ D P+ + LR ++R + G L+ +
Sbjct: 299 YRVLADHVRTLTFSITDGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTL 358
Query: 357 AEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
+ ++PE+ + + IL EE F K L + + E++ E
Sbjct: 359 IGQVKVIFPEVTKDPSFLYEILDEEEASFA----------KTLDRGEKLFEKY---VEAA 405
Query: 417 LVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKL 476
G K L G + LYDTYG ++ + +A L + FE+
Sbjct: 406 AQSGTKVL-------------DGKQVWRLYDTYGFPVDLTELMAEEHGLKIDGPGFEKAK 452
Query: 477 NELKERSK---AKAASNVPDIDLMDLKHF-----PVTDDKYKYDYHYDTNSKRYTFPCLD 528
E E SK K A N+ +++ L P TDD S +Y ++
Sbjct: 453 QESYEASKRGGKKEADNLIKLNVHTLSQLNEAKVPKTDD-----------SAKYGNKDIE 501
Query: 529 TNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI 588
+ ++ I G + F + I + G+I DKT YA GGQ D
Sbjct: 502 STILKIFDGSE-FVTEIKEIGKS----------------YGIILDKTCFYAEQGGQEYDT 544
Query: 589 GVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA 648
G + +++ N VE +L + G + H G +++ ++ G D R
Sbjct: 545 GKLVIDGSSEFN--VENVQLYN--GFVFHTG-ILADGSLSVGDKIIASFDELRRFPIKNN 599
Query: 649 HTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
HT +H+LN AL+ L QK V ++ DFS + + +S+D +A +E N I
Sbjct: 600 HTGTHILNFALKETLGGEVDQKGSLVAPEKLRFDFS-HKKAVSLDELAKIEAICNKQIEE 658
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPD------------DVILIDISDKENVISREP 755
+ V + + + ++ + + GE YPD D++ ++K S E
Sbjct: 659 SLAVYYKDVPLEKARTISSVRAVFGETYPDPVRVVSVGVPVEDLMEDPTNEKWTNYSVEF 718
Query: 756 CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
C GTHV T I+ +I G+R I +TG
Sbjct: 719 CGGTHVAKTSDIKFFVIIEESGIAKGIRRIVAVTG 753
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + P+ R NSQKCIR GGKHNDL GRD
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFLGTVDPSSDFYSLKRAYNSQKCIRAGGKHNDLEDVGRD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K A A LTK S+P +RLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKEGAITFAWNLLTK-VYSIPSERLYVTY 141
>gi|374852346|dbj|BAL55281.1| alanyl-tRNA synthetase [uncultured Bacteroidetes bacterium]
Length = 863
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 269/811 (33%), Positives = 400/811 (49%), Gaps = 103/811 (12%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ +R +FLD+F +GH +V S+P+V D ++ FVN+GM FK+VF+G P PRV
Sbjct: 3 STHEVRKTFLDFFAE-KGHLIVPSAPLVNKHDPTLFFVNAGMNPFKDVFMGFKEPPAPRV 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSL 132
A++QKC+RV GKHNDL G D+YHHTFFEMLGNWSF DY+K +A A E LTK L
Sbjct: 62 ADTQKCLRVSGKHNDLEEVGHDTYHHTFFEMLGNWSFGDYFKEEAIAWAWELLTK-VYKL 120
Query: 133 PLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSS 192
P RLY T FGG + +GLP DEET +W + VP++ I+ G K NFWEMG TGPCG +
Sbjct: 121 PPHRLYVTVFGGDEAWGLPADEETYALW-QRWVPKERIRFFGKKDNFWEMGDTGPCGPCT 179
Query: 193 EIHYDMKGE--PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
EIH D++G+ P SA +N +IE+WN+VFI + R S ++ PL +DTG+G E
Sbjct: 180 EIHIDLRGDAAPGSAADLLNTGNPLVIELWNLVFIQYNRRSDGSLEPLPLKSVDTGMGLE 239
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RL +LQ KTSTYD DLF+ L + +E+++G YG+ + R+D+ + R+ D+ R I
Sbjct: 240 RLAMVLQGKTSTYDIDLFVALRKKLEELTGIL-YGQ----AQRSDV--ALRVACDHVRGI 292
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVK----QGKLVKELSYNIAEILGDVYPE 366
A+AD P T + LL + + Q + +L +AE+ +PE
Sbjct: 293 AFAIADGQLPSNTGA--GYILRRLLRRALRYGYQYLGIQQPFLHKLVPVLAELYEATFPE 350
Query: 367 I-QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
+ Q + ++I GEE L + G+ L
Sbjct: 351 LAQQAQTVARIIEGEEESFLHTLGR-----------------------------GLSRLE 381
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
LA+ S EI G +AF LYDTYG ++ Q +A + LT+ + FE+ L K RS
Sbjct: 382 SFLAQH-SGKEIPGAVAFELYDTYGFPLDLTQLIARERGLTVELKGFEEALARQKARS-- 438
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
+ A+ + D ++L P + +G V+
Sbjct: 439 RQATQRTESDWVELAEGPHS----------------------------AFVGYDVYEAPV 470
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
+R + +Q A+ L+ D+T Y GGQ+ D G+ Y + K+ +
Sbjct: 471 RILR-------MRKVQEAKGAFFHLVLDQTPFYPEGGGQMSDQGILY-----RGEEKISV 518
Query: 606 GELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-T 664
+ + IVH VV+S T ++D R R HT +HLL+AALR+VL T
Sbjct: 519 LGVYREQDSIVH---VVASIPEDLEGTWTAKIDIPRREALSRHHTATHLLHAALRQVLGT 575
Query: 665 CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV-QVDRRHMRASELPF 723
Q V D DF+ + + L+ + + A+E +N I + +++ R + A E
Sbjct: 576 HVRQSGSLVAPDRLRFDFT-HPQRLTPEEIQALETIVNQKIEEALPRIEYRDI-AYEEAL 633
Query: 724 LTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVR 783
GE Y + V +I+ SRE C GTHV NT + ++ + GVR
Sbjct: 634 QKGALAFFGEKYGERVRMIEFGGD---FSRELCGGTHVSNTLELRFFKILSEMASAAGVR 690
Query: 784 SIKCLTGDSSKAAVENGKHLSTAASFSQILN 814
++ + G + VE + LS + +L
Sbjct: 691 RVEAVAGKAYIDWVE--RQLSDLQALRSLLK 719
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ FVN+GM FK+VF+G P PRVA++QKC+RV GKHNDL G D+YHHTFFEM
Sbjct: 33 DPTLFFVNAGMNPFKDVFMGFKEPPAPRVADTQKCLRVSGKHNDLEEVGHDTYHHTFFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K +A A E LTK LP RLY T
Sbjct: 93 LGNWSFGDYFKEEAIAWAWELLTK-VYKLPPHRLYVT 128
>gi|46108048|ref|XP_381082.1| hypothetical protein FG00906.1 [Gibberella zeae PH-1]
Length = 957
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 252/816 (30%), Positives = 402/816 (49%), Gaps = 92/816 (11%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPA 67
S ++ + +R +F +YF +GHT+V SS +VP+ D ++ F N+GM QFK +FLG
Sbjct: 4 SELKWPAARVRKTFFEYF-EQRGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTVGK 62
Query: 68 PYPRVA-----NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMAL 122
P + +SQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A +
Sbjct: 63 TDPMASLKAAVDSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAISYSW 122
Query: 123 EFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEM 182
E LTK L RLY TYF G ++ L D E +++W+ +GVP DHI MK NFWEM
Sbjct: 123 ELLTKV-YGLDPSRLYVTYFEGDEKLKLEPDLEAKELWISVGVPEDHILPGNMKDNFWEM 181
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
G GPCG SEIHYD G +A + VN D ++E+WN VF+ + R ++ L +
Sbjct: 182 GDQGPCGPCSEIHYDKVG-GRNASSLVNMDDPMVVEVWNNVFMQYDRQKDGSLKSLPAKH 240
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRM 302
IDTG+G+ERLV+ LQ+ S Y TD F PL + I++V+GA+PY + + +DT+YR+
Sbjct: 241 IDTGMGYERLVSALQDTVSNYATDCFTPLFQKIQEVTGARPYTDKYGKDDADGIDTAYRV 300
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI 359
++D+ R ++ ++AD P+ + +R V+R + + F G ++ + +
Sbjct: 301 VADHIRTLSFSIADGAVPNNDGRGYVIRRVLRRGVRYARKYFNADIGAFFSKILPALVDQ 360
Query: 360 LGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
+G+ +PE+ I+ IL EE F K L + + + E++
Sbjct: 361 MGEQFPELVKKQQDIKEILDEEEVAFA----------KTLDRGEAQFEKY---------- 400
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
TK A+ ++ GD+ + LYDT+G ++ + +A + L + E + ++
Sbjct: 401 -AAEATKNGAK-----KLQGDVVWRLYDTFGFPVDLTRLMAEERNLEIDDEEVKAAQDKA 454
Query: 480 KERSKAKAAS-------NVPDIDLM--DLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
+E SKA S NV I + DLK DD F D+N
Sbjct: 455 REASKAVKESVQTFAKLNVHQISELEKDLKVERTNDDA--------------KFLLGDSN 500
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
+I D + + + +GL+ DKTN YA +GGQ+ D G
Sbjct: 501 AQVQLIYDGTSFLKS-------------TKDVPEKTALGLLIDKTNFYAESGGQVADTGR 547
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ + + ++ ++ + G ++H G + ++ G E D R H+
Sbjct: 548 IVIDDVAE----FKVLDVQNYGGYVLHNG-YIEYGTLSSGDKVICEYDELRRSPIRNNHS 602
Query: 651 TSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H+LN +LR VL QK V SD+ DFS + + ++ + +E+ N+ I
Sbjct: 603 GTHILNHSLREVLGDEVNQKGSLVDSDKLRFDFS-HKTGVKIEELKKIEEMSNEYIRRGQ 661
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CC 757
++ + + + + + GE YPD V ++ I + + +P C
Sbjct: 662 KIYSKEVDLEKARQIEGCRAVFGETYPDPVRVVSIGKDIDEMLADPKKPEWRQYSVEFCG 721
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
GTHV TG I+ +I G+R I TG+++
Sbjct: 722 GTHVEQTGLIKDLILIEESGIAKGIRRIIAYTGEAA 757
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA-----NSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P + +SQKCIR GGKHNDL G+D
Sbjct: 35 VPHNDPTLLFTNAGMNQFKPIFLGTVGKTDPMASLKAAVDSQKCIRAGGKHNDLDDVGKD 94
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK L RLY T+
Sbjct: 95 SYHHTFFEMLGNWSFGDYFKKEAISYSWELLTK-VYGLDPSRLYVTY 140
>gi|302838115|ref|XP_002950616.1| hypothetical protein VOLCADRAFT_120886 [Volvox carteri f.
nagariensis]
gi|300264165|gb|EFJ48362.1| hypothetical protein VOLCADRAFT_120886 [Volvox carteri f.
nagariensis]
Length = 1143
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 273/854 (31%), Positives = 402/854 (47%), Gaps = 123/854 (14%)
Query: 18 RSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQ--------------------- 56
R++F ++F T+ HT SS +VP+ D ++ F N+GM Q
Sbjct: 183 RAAFNEFF-ETKAHTYWASSSVVPHNDPTLLFTNAGMNQASDQSQGQANWQHHHAYLPHS 241
Query: 57 -FKNVFLGLTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN 110
FK VFLG R NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF
Sbjct: 242 WFKPVFLGTVDPNSDMGKLKRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFG 301
Query: 111 DYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHI 170
DY+K +A A E LTK LP DRLY TYF G GLP D+E R+IWL +P +
Sbjct: 302 DYFKEEAISWAWELLTKW-YKLPADRLYATYFRGDPGQGLPADDEAREIWLRF-LPESRV 359
Query: 171 KKEGMKCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRV 230
G K NFWEMG GPCG +EIH+D G +A VNAD +++EIWN VFI R
Sbjct: 360 LPYGNKENFWEMGDQGPCGPCTEIHFDRIGGRDAA-DLVNADDPNVLEIWNNVFIQFNRE 418
Query: 231 SADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTT 290
T+ L ++DTG+G ER+ ++LQ K S Y TDLF P+ + I++V+GA+ Y
Sbjct: 419 PDGTLKTLPAKHVDTGMGLERITSVLQGKMSNYATDLFGPIFDAIQQVTGARTYTDKIGK 478
Query: 291 SNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGK 347
+ +D +YR+++D+ R ++ ++AD P + LR ++R A+ + K+G
Sbjct: 479 EDADGVDMAYRVVADHIRTLSFSIADGARPGNEGRDYVLRRILRRAVRYGRETLGAKEGF 538
Query: 348 LVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELE 407
+ +A G +PE+ + I +L EE F + LVK +E
Sbjct: 539 FAGLVDVVVAN-FGGFFPELVKQRDTIYSVLREEEAAFS----------RTLVKG---IE 584
Query: 408 QFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTL 467
+F K+ A + +I G AF L+DTYG ++ Q +A + +T+
Sbjct: 585 RF----------------KKAASAATDNKIPGYEAFVLWDTYGFPVDLTQLMAEERGMTV 628
Query: 468 CHEAFEQKLNELKERSKA---KAAS-----NVPDIDLMDLKHFPVTDDKYKYDYHYDTNS 519
A+E LNE +E+S+ KAA + P+T+D KY D ++
Sbjct: 629 DMPAYEAALNEAREKSRQGGKKAAGAGIKFEAEATGWLQSNGVPLTNDAPKYG-SSDVSA 687
Query: 520 KRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYA 579
K L + G V + A + + VGL+ D T+ YA
Sbjct: 688 KV---------LAILTPGGFVASTSEAA---------------DQDGPVGLVLDTTSFYA 723
Query: 580 TAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVD 638
+GGQI D G E + + + G ++H G V+ F+V +T V VD
Sbjct: 724 ESGGQIGDTGAI----RGPEGAALVVSDCQVAAGFVLHVGEASVAPFRVGDEVT--VSVD 777
Query: 639 ARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAV 697
R HT +H+LN AL+ L QK V D+ DFS G + + +AAV
Sbjct: 778 YERRSLIKPNHTFTHVLNFALKSTLGDHVDQKGSIVLPDKLRFDFSNAG-PVEANQLAAV 836
Query: 698 EKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDV-----------ILIDISD 746
EK + +A + V + ++ + L + GE+YPD V +L D D
Sbjct: 837 EKICREAVAAAMPVHSGEVPLAQARSINGLRAVFGEVYPDPVRVVSIGRAVEELLADPKD 896
Query: 747 KEN-VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST 805
N S E C GTH+ NT E+ ++ + G+R I +T + A+E L
Sbjct: 897 AANAAFSIEFCGGTHLSNTSEAEAFALLSEEGIAKGIRRIVAVTRGDAVRAIEAAADLK- 955
Query: 806 AASFSQILNVGNIP 819
+++ ++ +P
Sbjct: 956 ----AELASIATLP 965
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 69/129 (53%), Gaps = 28/129 (21%)
Query: 818 IPYGDDSIAFVNSGMCQ----------------------FKNVFLGLTP-----APYPRV 850
+P+ D ++ F N+GM Q FK VFLG R
Sbjct: 204 VPHNDPTLLFTNAGMNQASDQSQGQANWQHHHAYLPHSWFKPVFLGTVDPNSDMGKLKRA 263
Query: 851 ANSQKCIRVGGKHNDLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSL 910
NSQKCIR GGKHNDL G+D YHHTFFEMLGNWSF DY+K +A A E LTK L
Sbjct: 264 CNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKEEAISWAWELLTK-WYKL 322
Query: 911 PLDRLYFTF 919
P DRLY T+
Sbjct: 323 PADRLYATY 331
>gi|346321718|gb|EGX91317.1| alanyl-tRNA synthetase [Cordyceps militaris CM01]
Length = 956
Score = 381 bits (979), Expect = e-102, Method: Compositional matrix adjust.
Identities = 267/847 (31%), Positives = 414/847 (48%), Gaps = 97/847 (11%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP--- 70
+ +R +FLD+F +GHT+V S +VP+ D ++ F N+GM QFK +FLG P
Sbjct: 9 AAKVRQTFLDFF-EKRGHTIVPSGSVVPHNDPTLLFTNAGMNQFKPIFLGTVGKTDPMAN 67
Query: 71 --RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R A++QK +R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A MA E LTK
Sbjct: 68 LKRAADTQKVIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEMAWELLTKV 127
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
+ +RLY TYF GS + GL D E +++W +LGVP D I MK NFWEMG GPC
Sbjct: 128 -YGIDPERLYVTYFEGSAELGLEPDLEAKELWHDLGVPYDRILPGDMKDNFWEMGDQGPC 186
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G SEIHYD G ++A + VN D ++EIWN+VF+ R ++ L +IDTGLG
Sbjct: 187 GPCSEIHYDKVGGRNAA-SLVNMDDPMVVEIWNLVFMQFDRQKDRSLKSLPAKHIDTGLG 245
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
+ERLV+ LQN S Y TD F PL + IE V+G +PY + + +DT+YR+++D+ R
Sbjct: 246 YERLVSALQNTISNYATDCFTPLFQHIESVTGVRPYTDKYGKDDIDGVDTAYRVVADHIR 305
Query: 309 MITVALADNMFPDATAKLRNVVRDALLISEDVFK---VKQGKLVKELSYNIAEILGDVYP 365
++ A+ D P++ + V R K + G ++ + E +G +P
Sbjct: 306 TLSFAIIDGAVPNSDGRGYVVRRVLRRGVRYARKYLNAEIGSFFSKILPALVEQVGSQFP 365
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
++ I+ IL EE F + L + + + E KY T
Sbjct: 366 DLIKKQEDIKEILNEEEEAFS----------RTLDRGETQFE--------------KYAT 401
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
K L ++ ++ GD+ + LYDT+G ++ + +A + L + E ++ +E SKA
Sbjct: 402 KALK--DNVKKLDGDVVWRLYDTFGFPVDLTKLMAEERGLDIDEAEVEVAKDKAREASKA 459
Query: 486 -KAAS------NVPDIDLMDLKH-FPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
K AS NV I ++ +H P TDD+ K+ + G G
Sbjct: 460 VKDASATFEKLNVHLIAELEQQHKLPRTDDEGKF-------------------VKGDSKG 500
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
+ D + + L VGL+ +KTN YA +GGQI D G + +
Sbjct: 501 NIQIIFDGKTFHKS-------TKDLPPKTAVGLLLNKTNFYAESGGQIADTGRIIIDDVA 553
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+ ++ ++ + G ++H G + ++ G E D R H+ +H+LN
Sbjct: 554 E----FKVMDVQNFGGYVLHSG-YIEYGALSSGDEVICEYDELRRSPIRNNHSGTHVLNH 608
Query: 658 ALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL QK V ++ DFS + + +D + +E N I +V + +
Sbjct: 609 ALREVLGEDINQKGSLVDDEKLRFDFS-HKAQVKIDELKKIEDLSNAYIRQNAKVYAKDV 667
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFNT 764
+ + + GE YP+ V ++ I + + EP C GTHV +T
Sbjct: 668 DLDLAREIEGVRAVFGETYPNPVRVVSIGMDIDTMLAEPKKADWRKYSVEFCGGTHVEHT 727
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILN-VGNIPYGDD 823
G ++ ++ G+R I TG+++ + A FS+ L+ + +P+G +
Sbjct: 728 GLLKDLLIVEESGIAKGIRRIIAYTGEAAH------RIQREAVEFSKTLDALDALPFGPE 781
Query: 824 SIAFVNS 830
A V +
Sbjct: 782 KEAQVKT 788
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P R A++QK IR GGKHNDL G+D
Sbjct: 34 VPHNDPTLLFTNAGMNQFKPIFLGTVGKTDPMANLKRAADTQKVIRAGGKHNDLDDVGKD 93
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A MA E LTK + +RLY T+
Sbjct: 94 SYHHTFFEMLGNWSFGDYFKKEAIEMAWELLTK-VYGIDPERLYVTY 139
>gi|193214313|ref|YP_001995512.1| alanyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
gi|193087790|gb|ACF13065.1| alanyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
Length = 887
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 261/798 (32%), Positives = 400/798 (50%), Gaps = 109/798 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ SK IR +FLD+F + Q H +V+S+P++P D ++ F N+GM QFK+VFLG+ PY R
Sbjct: 1 MTSKEIRQAFLDFFTSKQ-HEIVRSAPVIPADDPTLLFTNAGMNQFKDVFLGIGSRPYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A++QKC+R GKHNDL GRD+YHHTFFEMLGNWSF DYYK++A A E LT
Sbjct: 60 AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKKEAITWAWELLT-DVWK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP DRLY T + D+E ++W E + HI++ G K NFWEMG TGPCG
Sbjct: 119 LPKDRLYATVY--------KDDDEAFELWKSETDIAASHIQRHGEKDNFWEMGETGPCGP 170
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIH D+ + S A A VNA R ++IEIWN+VFI + R +A + PL ++DTG+GFE
Sbjct: 171 CSEIHIDLTPDKSGA-ALVNAGRPEVIEIWNLVFIQYNRDAAGKLHPLPAKHVDTGMGFE 229
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +LQ KTS YD+D+F P+L+ I ++ G+T+ S +D D + R+L+D+ R +
Sbjct: 230 RIAAVLQGKTSNYDSDVFTPILKKIGDIT-----GKTYGGSMESDTDMAMRVLADHIRTL 284
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
A+AD P + LR ++R + + + + + L K L+ + E +GDV+PE+
Sbjct: 285 AFAIADGGTPSNEGRGYVLRRILRRGVRYARQLGQ-NEPTLYK-LTEVLCETMGDVFPEL 342
Query: 368 QDSINKI-QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ I Q+I EE L + +E FN + E G K
Sbjct: 343 VERRQVIEQVIKAEEESFLQTLDRG--------------IEIFNGVTEKLKKSGGKV--- 385
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
I G AF LYDTYG ++ + +A L++ + F + E K+R++
Sbjct: 386 ----------IDGADAFKLYDTYGFPLDLTRLMAEEIGLSVDEDGFLANMKEQKDRAR-- 433
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
D K K ++ L T G +Q I
Sbjct: 434 ------------------KDRKEKSAVAEESGEWTIFAETLKTEFSGYETLEQKSRI--- 472
Query: 547 AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG------VAYLTNTTQEN 600
R ++G + L+ +KT YA +GGQ D G ++ + TQ+
Sbjct: 473 -ARAKKAGEKLL-----------LVLEKTPFYAESGGQQGDSGEIETDAFSFHISDTQKE 520
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTP--GLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
G + + + + K + +F + L + +V+A R R HT +HLL+ A
Sbjct: 521 GDLVLHIVDKITDKESGDAVAIENFDLEKLSSLEADAKVNAETRGATARNHTATHLLHEA 580
Query: 659 LRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
LR VL QK V + DFS + E +S +++A +E+ +N Q+++ + +
Sbjct: 581 LREVLGEHVQQKGSLVGPERLRFDFSHF-ERVSEEAMAQIEQIVN----AQIRMAKAVKK 635
Query: 718 ASELPF-----LTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
+++PF + L G+ Y D V ++++ S E C GTH+ N G I +
Sbjct: 636 HADVPFEDAKKMGALAFF-GDKYGDFVRVVEVPG----YSVEFCGGTHLDNIGEIGLLKI 690
Query: 773 IGYKSYNHGVRSIKCLTG 790
+ S G+R ++ +TG
Sbjct: 691 VSESSIASGIRRVEAVTG 708
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG+ PY R A++QKCIR GKHNDL GRD+YHHT
Sbjct: 28 IPADDPTLLFTNAGMNQFKDVFLGIGSRPYTRAADTQKCIRASGKHNDLEDVGRDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK++A A E LT LP DRLY T
Sbjct: 88 FFEMLGNWSFGDYYKKEAITWAWELLT-DVWKLPKDRLYAT 127
>gi|393905900|gb|EFO19940.2| alanyl-tRNA synthetase [Loa loa]
Length = 831
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 269/816 (32%), Positives = 392/816 (48%), Gaps = 80/816 (9%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG--LTPAP 68
RL ++ IR SFL+YF HT V SS ++P D+S+ FVN+GM QFK +FLG T
Sbjct: 22 RLSAQQIRLSFLEYF-KEHDHTYVPSSSVIPEDDNSVTFVNAGMNQFKPLFLGAKFTEGK 80
Query: 69 YP---RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
+ V N QKC+RVGGKHND GRD HHTFFEMLGN+SF Y K +ACR A FL
Sbjct: 81 FAALRNVVNWQKCIRVGGKHNDFDDVGRDLTHHTFFEMLGNYSFGGYSKAEACRYAWNFL 140
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
T + +P DRLY TYF G + L D E RDIW++LGVP D + NFWEM T
Sbjct: 141 TDV-LRIPADRLYVTYFSGDENLKLKEDHECRDIWIKLGVPEDRVLGCCFNHNFWEMAET 199
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG +EIHYD+ G A VN++ ++EIWN+VF+ R + I L Y+D
Sbjct: 200 GPCGPCTEIHYDLIGN-RKAQKLVNSNNPTVVEIWNLVFMQFTRDMSGRISSLPTLYVDC 258
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPY-GRTFTTSNRTDLDTSYRMLS 304
G+GFERLV+I+Q S YDTDLFLPL+E I K S Y GR+ D+DT+YR+++
Sbjct: 259 GMGFERLVSIVQGLRSAYDTDLFLPLMEIICKYSKVGRYSGRS------GDIDTAYRIIA 312
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D+ R + ++D + P + + LR V+R A L L+ + G
Sbjct: 313 DHLRAACIMISDGVEPGSRNRGYHLRRVLRRAAL---------------NLTLTLGAERG 357
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
+ + D +N I L+ + + K + E + K+ + G
Sbjct: 358 TLASLVPDFVNHITLLYDSVAACETIIVKTVMSEEQLFWKSYDK--------------GT 403
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
K L +A I + G++A+ L YGL IIQ++ K L + + F L ++
Sbjct: 404 KLLEHNIASQQHI--LPGEIAWMLSGNYGLPLAIIQKVCNEKGLKVDVDGFHHCLTNFQK 461
Query: 482 RSKAKAAS-NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
KA+ D++ M L TDD KY Y FP +V I
Sbjct: 462 TQKAEEEPWQKVDLEKMMLSGVKATDDSEKYCCK-RIKLGEYEFPSRTGAVVAI------ 514
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
F ++ ++ +SG ++ D T +A GGQ+ D G+ + N
Sbjct: 515 FDVNGKSVMALKSGEG-----------GSVVMDSTVFFAEQGGQLYDRGI---LRDSLNN 560
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
+ G I+H G V + + GL +D + R M HT +H+L+ AL
Sbjct: 561 VIFTVNSAKRRNGYIIHTGEVANGQTLEKGLNLVQIIDPKQRFSLMCGHTATHILHFALE 620
Query: 661 RVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
+V + Q + D+ DF V E +++ + V +N +I + + V +++ +
Sbjct: 621 KVFDASVRQMGSFIGPDKLHFDFFVPDEKFTLEKIEEVMATVNMIIESNLNVTVKYILQN 680
Query: 720 ELPFLTHLTVIPGEIYPD-------DVILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
EL + H +I + +I I+ S EPCCGTHV NTG I +
Sbjct: 681 ELGSM-HKNFSAFDISQEAAFDGSYRIITIESSQLLGQDIIEPCCGTHVCNTGDIGRFVI 739
Query: 773 IGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
IG KS + VR I +T ++ ++ N L+ S
Sbjct: 740 IGQKSRSANVRRIYAVTNTTALESIHNATKLNNELS 775
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG--LTPAPYP---RVANSQKCIRVGGKHNDLSFAGRD 872
IP D+S+ FVN+GM QFK +FLG T + V N QKCIRVGGKHND GRD
Sbjct: 50 IPEDDNSVTFVNAGMNQFKPLFLGAKFTEGKFAALRNVVNWQKCIRVGGKHNDFDDVGRD 109
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGN+SF Y K +ACR A FLT + +P DRLY T+
Sbjct: 110 LTHHTFFEMLGNYSFGGYSKAEACRYAWNFLTD-VLRIPADRLYVTY 155
>gi|6176440|gb|AAF05592.1|AF188717_1 alanyl-tRNA synthetase [Dictyostelium discoideum]
Length = 946
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 250/821 (30%), Positives = 396/821 (48%), Gaps = 99/821 (12%)
Query: 16 SIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYP 70
IR +F+D+F HT V SS ++P+ D ++ F N+GM QFK +FLG + P A
Sbjct: 5 QIRKTFIDFFREKYEHTFVPSSAVIPHDDPTLLFANAGMNQFKPIFLGQVNPKSEQAKLK 64
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF +Y+K++A A E LT+
Sbjct: 65 RAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGNYFKKEAITWAWELLTE-VY 123
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
L +RLY TYF G + GL D E +++WL+ +P + + GMK NFWEMG GPCG
Sbjct: 124 KLDKERLYVTYFRGDPEKGLEADLEAKNLWLQY-LPEERVLPFGMKENFWEMGDQGPCGP 182
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIHYD K E + VNAD LIEIWN+VFI + R + ++ PL + ++DTG+G E
Sbjct: 183 CSEIHYD-KVEGRDGASFVNADDPTLIEIWNLVFIQYNREADKSLRPLPQKHVDTGMGLE 241
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSG-AKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
RL +I+Q + YDTD+F+P+ I++V+G +PYG + +D +YR+++D+ R
Sbjct: 242 RLTSIIQKVPTNYDTDVFMPIFAAIQEVTGYPEPYGGKVGAEDTQQVDMAYRVIADHIRT 301
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
+T ++AD P + LR ++R A+ + G K + IA G+ +PE
Sbjct: 302 LTFSIADGAAPSVDGRGQVLRRILRRAVRYGKQKLNAPTGFFSKLVDVVIAN-FGEFFPE 360
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
++ I+++L E +F+ + + E++ ++K
Sbjct: 361 LRKKPEHIKMVLTREEDMFNKTLEKGIVEFEKMIKKSVN--------------------- 399
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
+S + A+ L YG ++ +A K + + +E E + +
Sbjct: 400 --------NTLSAENAYFLSTCYGFPIDLTTIMAEEKNYKVDIKGYEGLCEAQSEIDRKR 451
Query: 487 AASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
++ L + TDD +KY H + + + I G
Sbjct: 452 QKEKKVELTLGAEANAWLKNNDIKPTDDSFKYKQHE-----------IQSVIKAIWNG-- 498
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
K + A G I G++ + +N YA GGQI DIG L+ +
Sbjct: 499 -----KEFVDTAPKGTLI-----------GVVLENSNFYAEQGGQIYDIG--QLSFIDDQ 540
Query: 600 NGKVEIGELASLEGKIVHFGNV---VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
++ + G ++H G + S KV G + VD R M HT++H++N
Sbjct: 541 KTAFDVKDCKVFGGYVLHIGYLSYECDSLKV--GDRVELTVDYTRRSPIMSNHTSTHMVN 598
Query: 657 AALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
AL+ +L Q+ V + DFS +G ++ D + +++ +ND I Q+ V +
Sbjct: 599 YALKNILGDGIDQRGSFVDAQRFRFDFS-FGRAITKDELIKIDQIVNDQIFKQLDVHAKE 657
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFN 763
+ + + L + GE+YPD V ++ + + P C GTH+ N
Sbjct: 658 VGLASAKKINGLRAVFGEVYPDPVRVVSVGVPVEQLIENPTNPEWANYSIEFCGGTHLSN 717
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
T E T+ ++ GVR I +TG + +A+E K L
Sbjct: 718 TKQAELFTITSEETLGAGVRRIVAVTGSEAASAIELNKELE 758
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG + P A R NSQKCIR GGKHNDL G+D
Sbjct: 29 IPHDDPTLLFANAGMNQFKPIFLGQVNPKSEQAKLKRAVNSQKCIRAGGKHNDLDDVGKD 88
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF +Y+K++A A E LT+ L +RLY T+
Sbjct: 89 TYHHTFFEMLGNWSFGNYFKKEAITWAWELLTE-VYKLDKERLYVTY 134
>gi|380495208|emb|CCF32573.1| alanyl-tRNA synthetase [Colletotrichum higginsianum]
Length = 955
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 261/807 (32%), Positives = 406/807 (50%), Gaps = 92/807 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----R 71
+R +FL++F +GHT+V SS +VP+ D ++ F N+GM QFK +FLG P R
Sbjct: 11 VRKTFLEFF-EKRGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTISKADPMYSLKR 69
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
++QKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K+DA M+ E LTK
Sbjct: 70 ATDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKDAIEMSWELLTKV-YG 128
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L RLY TYF G+ GL D E + +W +GVP DHI MK NFWEMG GPCG
Sbjct: 129 LDPSRLYVTYFEGNPDMGLEPDLEAKGLWQSVGVPEDHILPGNMKDNFWEMGDQGPCGPC 188
Query: 192 SEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SE+HYD + G +S L VN D ++EIWN VFI + R ++ L ++DTG+GFE
Sbjct: 189 SEVHYDKIGGRNASDL--VNQDDPMVVEIWNNVFIQYDRQPDRSLKSLPAKHVDTGMGFE 246
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV+ LQN S Y TD+F PL + IE+V+GA+PY + + +DT+YR+++D+ R++
Sbjct: 247 RLVSALQNTVSNYATDIFTPLFQRIEEVTGARPYTDKYGADDVDGIDTAYRVVADHIRLL 306
Query: 311 TVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
T +++D P+ +R V+R + + F + G ++ + + +G+ +PEI
Sbjct: 307 TFSMSDGAVPNNDGRGYVVRRVLRRGVRYARKYFNAEIGSFFSKILPALVDQMGEQFPEI 366
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
I+ IL EE F + L + + + E++ +K K+
Sbjct: 367 VKKQQDIREILDEEEEAFA----------RTLDRGEAQFEKY-------ANAAIKKGEKK 409
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
L SG + LYDT+G ++ + +A +KL + + + ++ +E SK
Sbjct: 410 L---------SGAEVWRLYDTFGFPVDLTKLMAEERKLEIDDDEVKVAQDKAREASKVVK 460
Query: 488 AS-------NVPDI-DLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
S NV I +L + TDD+ KY D+ +K V ++ +
Sbjct: 461 NSVQTFAKLNVHQIAELEQQLNVARTDDEGKY-VKGDSKAK-----------VQLIYDGK 508
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
F ++ + A N +GL+ DKTN YA +GGQ+ D G + + +
Sbjct: 509 AF------VKSTKDVA--------ENTPLGLLLDKTNFYAESGGQVADTGRIVIDDVAE- 553
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
++ ++ + G IVH G + ++ G E D R HT +H+LN +L
Sbjct: 554 ---FKVLDVQNYGGYIVHNG-YLEYGTLSSGNEVICEYDELRRSPIRNNHTGTHILNHSL 609
Query: 660 RRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R VL QK V +++ DFS + +++ + +E + N I ++ + +
Sbjct: 610 REVLGDDINQKGSLVDNEKLRFDFS-HKTAVTIPELKKIEDFSNSYIRQNGKIYAKEVDL 668
Query: 719 SELPFLTHLTVIPGEIYPD-----------DVILIDISDKE-NVISREPCCGTHVFNTGH 766
+ + + GE YP+ D +L + + E +S E C GTHV TG
Sbjct: 669 DLAKGIEGVRAVFGETYPNPVRVVSVGVDVDTLLGNPKNPEWRKVSVEFCGGTHVEQTGL 728
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSS 793
I+ ++ G+R I TGD++
Sbjct: 729 IKDLVIVEESGIAKGIRRIIAYTGDAA 755
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P R ++QKCIR GGKHNDL G+D
Sbjct: 33 VPHNDPTLLFTNAGMNQFKPIFLGTISKADPMYSLKRATDTQKCIRAGGKHNDLDDVGKD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K+DA M+ E LTK L RLY T+
Sbjct: 93 SYHHTFFEMLGNWSFGDYFKKDAIEMSWELLTK-VYGLDPSRLYVTY 138
>gi|310789965|gb|EFQ25498.1| tRNA synthetase class II [Glomerella graminicola M1.001]
Length = 955
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 265/849 (31%), Positives = 412/849 (48%), Gaps = 94/849 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPA-----PYPR 71
+R +FL++F +GHT+V SS +VP+ D ++ F N+GM QFK +FLG P R
Sbjct: 11 VRKTFLEFF-EKRGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTISKADPMYPLKR 69
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
++QKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + E LTK
Sbjct: 70 ATDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEWSWELLTKV-YG 128
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYF G+ GL D E + +W +GVP DHI MK NFWEMG GPCG
Sbjct: 129 LDPDRLYVTYFEGNPDMGLEPDLEAKGLWQSVGVPEDHILPGNMKDNFWEMGDQGPCGPC 188
Query: 192 SEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SE+HYD + G +S L VN D ++EIWN VFI + R ++ L ++DTG+GFE
Sbjct: 189 SEVHYDKIGGRNASDL--VNQDDPMVVEIWNNVFIQYDRQPDRSLKSLPAKHVDTGMGFE 246
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV+ LQN S Y TD+F PL + IE+V+GA+PY + + +DT+YR+++D+ R++
Sbjct: 247 RLVSALQNTVSNYATDIFTPLFKRIEEVTGARPYTDKYGADDVDGIDTAYRVIADHIRLL 306
Query: 311 TVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
T +++D P+ +R V+R + + F + G ++ + + +G+ +PEI
Sbjct: 307 TFSMSDGAVPNNDGRGYVVRRVLRRGVRYARKYFNAEIGSFFSKILPALVDQMGEQFPEI 366
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ I+ IL EE F + L + + + E++ +K K+
Sbjct: 367 VKKQDDIREILDEEEEAFA----------RTLDRGEAQFEKY-------ANAAIKKGEKK 409
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
L SG + LYDT+G ++ + +A +KL + + + ++ +E SK
Sbjct: 410 L---------SGAEVWRLYDTFGFPVDLTKLMAEERKLEIDDDEVKAAQDKAREASKVVK 460
Query: 488 AS-------NVPDI-DLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
S NV I +L + TDD K+ V GD
Sbjct: 461 NSVQTFAKLNVHQIAELEQQLNVARTDDDAKF-----------------------VKGDS 497
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
+ + + G + + N +GL+ DKTN YA +GGQ+ D G + + +
Sbjct: 498 KAKV---QLIYDGKGFVKSTKDIAENTPLGLLLDKTNFYAESGGQVADTGRIVIDDVAE- 553
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
++ ++ + G IVH G + ++ G E D R HT +H+LN +L
Sbjct: 554 ---FKVLDVQNHGGYIVHNGYLEYGV-LSSGNEVICEYDELRRSPIRNNHTATHILNHSL 609
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R VL QK V +++ DFS + +++ + +E + N I ++ + +
Sbjct: 610 REVLGDDVNQKGSLVDNEKLRFDFS-HKTGVTIPELKKIEDFSNSYIRQNGKIYAKEVDL 668
Query: 719 SELPFLTHLTVIPGEIYPD-----------DVILIDISDKE-NVISREPCCGTHVFNTGH 766
+ + + GE YP+ D +L + + E IS E C GTHV TG
Sbjct: 669 DLAKGIEGVRAVFGETYPNPVRVVSVGVDVDTLLANPKNPEWRKISVEFCGGTHVDQTGL 728
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIPYGDDSIA 826
I+ ++ G+R I TGD++ S ++L G P + I
Sbjct: 729 IKDLVIVEESGIAKGIRRIIAYTGDAAHQVQREADEFSKRLDALEVLPFG--PEKEQEIK 786
Query: 827 FVNSGMCQF 835
+ Q
Sbjct: 787 TTQHALNQL 795
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPA-----PYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P R ++QKCIR GGKHNDL G+D
Sbjct: 33 VPHNDPTLLFTNAGMNQFKPIFLGTISKADPMYPLKRATDTQKCIRAGGKHNDLDDVGKD 92
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK L DRLY T+
Sbjct: 93 SYHHTFFEMLGNWSFGDYFKKEAIEWSWELLTK-VYGLDPDRLYVTY 138
>gi|66816759|ref|XP_642382.1| alanyl-tRNA synthetase [Dictyostelium discoideum AX4]
gi|74856597|sp|Q54Y20.1|SYAC_DICDI RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|60470104|gb|EAL68084.1| alanyl-tRNA synthetase [Dictyostelium discoideum AX4]
Length = 946
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 250/821 (30%), Positives = 396/821 (48%), Gaps = 99/821 (12%)
Query: 16 SIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYP 70
IR +F+D+F HT V SS ++P+ D ++ F N+GM QFK +FLG + P A
Sbjct: 5 QIRKTFIDFFREKCEHTFVPSSAVIPHDDPTLLFANAGMNQFKPIFLGQVNPKSEQAKLK 64
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R NSQKC+R GGKHNDL G+D+YHHTFFEMLGNWSF +Y+K++A A E LT+
Sbjct: 65 RAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGNYFKKEAITWAWELLTE-VY 123
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
L +RLY TYF G + GL D E +++WL+ +P + + GMK NFWEMG GPCG
Sbjct: 124 KLDKERLYVTYFRGDPEKGLEADLEAKNLWLQY-LPEERVLPFGMKENFWEMGDQGPCGP 182
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIHYD K E + VNAD LIEIWN+VFI + R + ++ PL + ++DTG+G E
Sbjct: 183 CSEIHYD-KVEGRDGASFVNADDPTLIEIWNLVFIQYNREADKSLRPLPQKHVDTGMGLE 241
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSG-AKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
RL +I+Q + YDTD+F+P+ I++V+G +PYG + +D +YR+++D+ R
Sbjct: 242 RLTSIIQKVPTNYDTDVFMPIFAAIQEVTGYPEPYGGKVGAEDTQQVDMAYRVIADHIRT 301
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
+T ++AD P + LR ++R A+ + G K + IA G+ +PE
Sbjct: 302 LTFSIADGAAPSVDGRGQVLRRILRRAVRYGKQKLNAPAGFFSKLVDVVIAN-FGEFFPE 360
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
++ I+++L E +F+ + + E++ ++K
Sbjct: 361 LRKKPEHIKMVLTREEDMFNKTLEKGIVEFEKMIKKSVN--------------------- 399
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
+S + A+ L YG ++ +A K + + +E E + +
Sbjct: 400 --------NTLSAENAYFLSTCYGFPIDLTTIMAEEKNYKVDIKGYEGLCEAQSEIDRKR 451
Query: 487 AASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
++ L + TDD +KY H + + + I G
Sbjct: 452 QKEKKVELTLGAEANAWLKNNDIKPTDDSFKYKQHE-----------IQSVIKAIWNG-- 498
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
K + A G I G++ + +N YA GGQI DIG L+ +
Sbjct: 499 -----KEFVDTAPKGTLI-----------GVVLENSNFYAEQGGQIYDIG--QLSFIDDQ 540
Query: 600 NGKVEIGELASLEGKIVHFGNV---VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
++ + G ++H G + S KV G + VD R M HT++H++N
Sbjct: 541 KTAFDVKDCKVFGGYVLHIGYLSYECDSLKV--GDRVELTVDYTRRSPIMSNHTSTHMVN 598
Query: 657 AALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
AL+ +L Q+ V + DFS +G ++ D + +++ +ND I Q+ V +
Sbjct: 599 YALKNILGDGIDQRGSFVDAQRFRFDFS-FGRAITKDELIKIDQIVNDQIFKQLDVHAKE 657
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFN 763
+ + + L + GE+YPD V ++ + + P C GTH+ N
Sbjct: 658 VGLASAKKINGLRAVFGEVYPDPVRVVSVGVPVEQLIENPTNPEWANYSIEFCGGTHLSN 717
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
T E T+ ++ GVR I +TG + +A+E K L
Sbjct: 718 TKQAELFTITSEETLGAGVRRIVAVTGSEAASAIELNKELE 758
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG + P A R NSQKCIR GGKHNDL G+D
Sbjct: 29 IPHDDPTLLFANAGMNQFKPIFLGQVNPKSEQAKLKRAVNSQKCIRAGGKHNDLDDVGKD 88
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF +Y+K++A A E LT+ L +RLY T+
Sbjct: 89 TYHHTFFEMLGNWSFGNYFKKEAITWAWELLTE-VYKLDKERLYVTY 134
>gi|312084084|ref|XP_003144129.1| alanyl-tRNA synthetase [Loa loa]
Length = 839
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 269/822 (32%), Positives = 392/822 (47%), Gaps = 83/822 (10%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG--LTPAP 68
RL ++ IR SFL+YF HT V SS ++P D+S+ FVN+GM QFK +FLG T
Sbjct: 21 RLSAQQIRLSFLEYF-KEHDHTYVPSSSVIPEDDNSVTFVNAGMNQFKPLFLGAKFTEGK 79
Query: 69 YP---RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
+ V N QKC+RVGGKHND GRD HHTFFEMLGN+SF Y K +ACR A FL
Sbjct: 80 FAALRNVVNWQKCIRVGGKHNDFDDVGRDLTHHTFFEMLGNYSFGGYSKAEACRYAWNFL 139
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
T + +P DRLY TYF G + L D E RDIW++LGVP D + NFWEM T
Sbjct: 140 TDV-LRIPADRLYVTYFSGDENLKLKEDHECRDIWIKLGVPEDRVLGCCFNHNFWEMAET 198
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG +EIHYD+ G A VN++ ++EIWN+VF+ R + I L Y+D
Sbjct: 199 GPCGPCTEIHYDLIGN-RKAQKLVNSNNPTVVEIWNLVFMQFTRDMSGRISSLPTLYVDC 257
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPY-GRTFTTSNRTDLDTSYRMLS 304
G+GFERLV+I+Q S YDTDLFLPL+E I K S Y GR+ D+DT+YR+++
Sbjct: 258 GMGFERLVSIVQGLRSAYDTDLFLPLMEIICKYSKVGRYSGRS------GDIDTAYRIIA 311
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D+ R + ++D + P + + LR V+R A L L+ + G
Sbjct: 312 DHLRAACIMISDGVEPGSRNRGYHLRRVLRRAAL---------------NLTLTLGAERG 356
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
+ + D +N I L+ + + K + E + K+ + G
Sbjct: 357 TLASLVPDFVNHITLLYDSVAACETIIVKTVMSEEQLFWKSYDK--------------GT 402
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
K L +A I + G++A+ L YGL IIQ++ K L + + F L ++
Sbjct: 403 KLLEHNIASQQHI--LPGEIAWMLSGNYGLPLAIIQKVCNEKGLKVDVDGFHHCLTNFQK 460
Query: 482 RSKAKAAS-NVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
KA+ D++ M L TDD KY Y FP +V I
Sbjct: 461 TQKAEEEPWQKVDLEKMMLSGVKATDDSEKYCCK-RIKLGEYEFPSRTGAVVAI------ 513
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV------AYLT 594
F ++ ++ +SG ++ D T +A GGQ+ D G+
Sbjct: 514 FDVNGKSVMALKSGEG-----------GSVVMDSTVFFAEQGGQLYDRGILRDSLNVIFM 562
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+ N + G I+H G V + + GL +D + R M HT +H+
Sbjct: 563 SQKCRNVIFTVNSAKRRNGYIIHTGEVANGQTLEKGLNLVQIIDPKQRFSLMCGHTATHI 622
Query: 655 LNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
L+ AL +V + Q + D+ DF V E +++ + V +N +I + + V
Sbjct: 623 LHFALEKVFDASVRQMGSFIGPDKLHFDFFVPDEKFTLEKIEEVMATVNMIIESNLNVTV 682
Query: 714 RHMRASELPFLTHLTVIPGEIYPD-------DVILIDISDKENVISREPCCGTHVFNTGH 766
+++ +EL + H +I + +I I+ S EPCCGTHV NTG
Sbjct: 683 KYILQNELGSM-HKNFSAFDISQEAAFDGSYRIITIESSQLLGQDIIEPCCGTHVCNTGD 741
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
I +IG KS + VR I +T ++ ++ N L+ S
Sbjct: 742 IGRFVIIGQKSRSANVRRIYAVTNTTALESIHNATKLNNELS 783
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG--LTPAPYP---RVANSQKCIRVGGKHNDLSFAGRD 872
IP D+S+ FVN+GM QFK +FLG T + V N QKCIRVGGKHND GRD
Sbjct: 49 IPEDDNSVTFVNAGMNQFKPLFLGAKFTEGKFAALRNVVNWQKCIRVGGKHNDFDDVGRD 108
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGN+SF Y K +ACR A FLT + +P DRLY T+
Sbjct: 109 LTHHTFFEMLGNYSFGGYSKAEACRYAWNFLTD-VLRIPADRLYVTY 154
>gi|324509264|gb|ADY43900.1| Alanyl-tRNA synthetase [Ascaris suum]
Length = 603
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 224/644 (34%), Positives = 337/644 (52%), Gaps = 71/644 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTPAP-- 68
L + +RS+F+++F N + HT V SS ++P+ D ++ F N+GM QFK +FLG + P+
Sbjct: 5 LTANEVRSAFINFFANRE-HTYVHSSSVIPFEDPTLLFANAGMNQFKPIFLGTVDPSSEL 63
Query: 69 --YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R N+QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++ C A E LT
Sbjct: 64 GRLRRAVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEVCNWAWELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
K + +P D+LY +YFGG ++ GL D+E R IWL++G+P + GMK NFWEMG G
Sbjct: 124 KE-LGIPADQLYVSYFGGDEKAGLAPDDECRQIWLDIGLPESRVLPFGMKDNFWEMGDVG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIH+D G A A VNAD ++EIWN+VF+ + R + L +ID G
Sbjct: 183 PCGPCSEIHFDRVGN-RDASALVNADDPMVVEIWNLVFMQYNREEGGVLRELPMRHIDCG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LG ERLV ++QNKTS YDTD F P+ + I+ + Y + +D +YR+++D+
Sbjct: 242 LGLERLVAVMQNKTSNYDTDAFTPIFDAIQASVCVRAYSGKVGAEDSDGIDMAYRVVADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R + VAL+D PD+T + LR ++R + + + G L + +LGD
Sbjct: 302 IRTLCVALSDGGRPDSTGRGYVLRRILRRGVRYANEKLGAPPG-FFASLVPVVVRLLGDT 360
Query: 364 YPEI-QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE+ +D + +I EE++ L + K + + E +QF
Sbjct: 361 FPELRKDPETVMDIINDEEAQFLKTLNRGRSLFQKAVAALESEAKQF------------- 407
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
GD+A+ LYDTYG ++ Q +A K+L++ +AFEQ + E
Sbjct: 408 ---------------PGDIAWRLYDTYGFPVDLTQLMAEEKQLSVDMDAFEQCRQKAVEM 452
Query: 483 SKAKAAS--NVPDIDLMDLKHF-----PVTDDKYKYDYHY---DTNSKRYTFPCLDTNLV 532
S A A + ++D+ + P TDD KYDY + + +Y+F + ++
Sbjct: 453 SSAGANKFRDTAELDVHGIAKLKKDGVPSTDDSPKYDYSAVGPNDITAKYSFAKCEGQVL 512
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
++ + G +DS+ V I D+TN YA GGQI D GV
Sbjct: 513 ALL----------------KEGTFVDSLYSGDKGAV--ILDRTNFYAEQGGQIYDTGV-- 552
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVE 636
LT E + E+ + G +V G+V + + L ++
Sbjct: 553 LTKIGDEGAEFEVSNVQMRGGYVVLVGSVEGNISIGDRLLQAID 596
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM QFK +FLG + P+ R N+QKCIR GGKHNDL G+D
Sbjct: 32 IPFEDPTLLFANAGMNQFKPIFLGTVDPSSELGRLRRAVNTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++ C A E LTK + +P D+LY ++
Sbjct: 92 VYHHTFFEMLGNWSFGDYFKKEVCNWAWELLTK-ELGIPADQLYVSY 137
>gi|367019996|ref|XP_003659283.1| hypothetical protein MYCTH_2296109 [Myceliophthora thermophila ATCC
42464]
gi|347006550|gb|AEO54038.1| hypothetical protein MYCTH_2296109 [Myceliophthora thermophila ATCC
42464]
Length = 933
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 257/810 (31%), Positives = 397/810 (49%), Gaps = 89/810 (10%)
Query: 36 SSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCVRVGGKHNDLSC 90
SS +VP+ D ++ F N+GM QFK +FLG P R +SQKC+R GGKHNDL
Sbjct: 3 SSSVVPHNDPTLLFTNAGMNQFKPIFLGTIGKTEPLAQLKRAVDSQKCIRAGGKHNDLDD 62
Query: 91 AGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGL 150
G+DSYHHTFFEMLGNWSF DY+K++A + + E LTK L RLY TYF G+ + L
Sbjct: 63 VGKDSYHHTFFEMLGNWSFGDYFKKEAIQWSWELLTKV-YGLDPARLYVTYFEGNPELNL 121
Query: 151 PCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVN 210
D E + +WL++GVP DHI MK NFWEMG GPCG SEIHYD G ++A VN
Sbjct: 122 EPDLEAKQLWLDVGVPEDHILPGNMKDNFWEMGDQGPCGPCSEIHYDKVGGRNAAHL-VN 180
Query: 211 ADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLP 270
D ++EIWN VF+ R ++ PL +IDTG+GFERLV+ LQNKTS Y TD+F P
Sbjct: 181 QDDPLVVEIWNNVFMQFDRQKDKSLKPLPAKHIDTGMGFERLVSALQNKTSNYATDIFTP 240
Query: 271 LLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPD---ATAKLR 327
L I++V+GA+PY + + +DT+YR+++D+ R++ A+AD P+ +R
Sbjct: 241 LFARIQEVTGARPYADKYGKDDADGIDTAYRVVADHIRLLAFAIADGAVPNNIGRGYVVR 300
Query: 328 NVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDN 387
V+R + + F + G + + E +G+ +PE++ I+ IL EE F
Sbjct: 301 RVLRRGVRYARKYFNAEIGSFFSSVLPALVEQMGEQFPELKKKQADIKEILDEEEVAF-- 358
Query: 388 LRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYD 447
AV L + + + E++ LA ++SG + LYD
Sbjct: 359 ----AV----TLDRGEKQFEKY----------------AALAVKSGENKLSGADVWRLYD 394
Query: 448 TYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA--KAASNVPDIDLMDLK----- 500
T+G +++ + +A + LT+ E + +E SKA +A + P +++ +
Sbjct: 395 TFGFPEDLTKLMAEERGLTIDEAEVEVAREKAREASKAVKEAVTTFPKLNVHQIAELENT 454
Query: 501 -HFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDS 559
+ P + + KY+ DT K V ++ F S
Sbjct: 455 INLPRPNSEAKYE-KGDTKGK-----------VQLIFTGTEF--------------RKTS 488
Query: 560 IQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFG 619
+L +GL+ D+TN YA +GGQ+ D G + + ++ ++ G +VH G
Sbjct: 489 KELPPKTPLGLLLDRTNFYAESGGQVADTGRIIIDGVAE----FKVLDVQEYGGYVVHNG 544
Query: 620 NVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDEC 678
+ ++T G E D R HT +H+LN ALR VL +QK V D+
Sbjct: 545 -YLEYGELTAGDEVICEYDELRRQPIRNNHTGTHILNHALREVLGDEVHQKGSLVDQDKL 603
Query: 679 ALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDD 738
DFS + ++++ + +E+ N+ I ++ + + + + + GE YP+
Sbjct: 604 RFDFS-HKSQVTLEEIKKIEEMSNEDIRKDLKTYAKDVDLDLARQIEGVRAVFGETYPNP 662
Query: 739 VILIDISDKENVISREP------------CCGTHVFNTGHIESCTVIGYKSYNHGVRSIK 786
V ++ I + + + P C GTHV TG I+ ++ G+R I
Sbjct: 663 VRVVSIGVDVDELLKNPKNPEWRKYSVEFCGGTHVEATGLIKDLIIVEESGIAKGIRRIV 722
Query: 787 CLTGDSSKAAVENGKHLSTAASFSQILNVG 816
TGD + A + K + + L G
Sbjct: 723 AYTGDGAHQAQRDAKTFAEKLDHIEALEFG 752
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P R +SQKCIR GGKHNDL G+D
Sbjct: 7 VPHNDPTLLFTNAGMNQFKPIFLGTIGKTEPLAQLKRAVDSQKCIRAGGKHNDLDDVGKD 66
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + + E LTK L RLY T+
Sbjct: 67 SYHHTFFEMLGNWSFGDYFKKEAIQWSWELLTK-VYGLDPARLYVTY 112
>gi|345303094|ref|YP_004824996.1| alanyl-tRNA synthetase [Rhodothermus marinus SG0.5JP17-172]
gi|345112327|gb|AEN73159.1| alanyl-tRNA synthetase [Rhodothermus marinus SG0.5JP17-172]
Length = 953
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 263/821 (32%), Positives = 407/821 (49%), Gaps = 90/821 (10%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
S+ IR SFLD+F +GH +V S+P+VP D ++ F N+GM QFK+VFLG+ PY R
Sbjct: 6 SSEQIRQSFLDFF-REKGHEIVPSAPLVPQNDPTLLFTNAGMNQFKDVFLGIGTRPYKRA 64
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSL 132
AN+QKC+RV GKHNDL G D+YHHTFFEMLGNWSF DY+KR+A R A E L + L
Sbjct: 65 ANTQKCLRVSGKHNDLEEVGPDTYHHTFFEMLGNWSFGDYFKREAIRWAWELLVER-WGL 123
Query: 133 PLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
DRLY T G + GL D E ++W E + HIK K NFW MG TGPCG
Sbjct: 124 DPDRLYATVHEGDEALGLEPDVEAAELWKSETSIDPSHIKFCSTKDNFWMMGDTGPCGPC 183
Query: 192 SEIHYDMKGEPSS----ALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + + VNA +IEIWN+VFI + + + PL ++DTG+
Sbjct: 184 SEIHIDLRPDEERRRVPGIELVNAGDPRVIEIWNLVFIQYNALPDGRLEPLKAKHVDTGM 243
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVS---GAKPYG--RTFTTSNRTDLDTSYRM 302
G ER+V +LQ KTS YDTDLF P+L+ ++S + Y R R + + R+
Sbjct: 244 GLERIVAVLQGKTSNYDTDLFAPILQRAAELSPRDEVRGYDDIRVADERERERIRVALRV 303
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI 359
++D+ R I A+AD + P T + +R ++R A+ ++ + L +A
Sbjct: 304 VADHIRAIAFAIADGVVPGNTGRGYVIRRILRRAVRYGYQTLGFRE-PFLHRLVEPLAHK 362
Query: 360 LGDVYPEIQDSINKIQLILGEES---------------RIFDNLRKAAVKEWKPLVKTQP 404
+G V+PEI+ ++ ++ E R+ L+ AA E +P+ +
Sbjct: 363 MGRVFPEIERHRAYVERVIKAEEESFLATLGTGLAFFERLLPYLKAAA--EGRPIEAIRA 420
Query: 405 EL----EQFNIMEEPGL-VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQEL 459
+L + +++++ + + + + + + + G++AF L+DTYG ++ Q +
Sbjct: 421 DLVRDSQALDLLQKAYVDTSDREAIVEAFLKSAAEKNVPGEVAFLLHDTYGFPIDLTQLM 480
Query: 460 AAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNS 519
A + L + +E+ + ++R +A+AAS L T D+ + + +
Sbjct: 481 AREEGLGVDMARYEELMQ--RQRERARAASTFGAAVL--------TADEEEAGWKRVSEG 530
Query: 520 KRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYA 579
+ F DT V + IR R +IQ L+ D+T YA
Sbjct: 531 EDSVFVGYDTTRV-----------EDARIRAVR------TIQTPEGPRHELVLDQTPFYA 573
Query: 580 TAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVE--V 637
+GGQ+ D GV + + ++ + + L G IVH+ + ++ L + VE V
Sbjct: 574 ESGGQVGDTGVLRVGDE-----EIRVLDTQKLGGHIVHYVD-----RLPKELDAPVEAIV 623
Query: 638 DARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAA 696
DA R + HT +HLL+AALR +L T QK V D DFS + E ++ + +
Sbjct: 624 DAARRKRIEKHHTATHLLHAALREILGTHVQQKGSLVAPDRLRFDFSHF-ERVTPELLRQ 682
Query: 697 VEKYINDVIANQVQVDRRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVIS 752
+E +N+VI V + E+P+ + + GE Y D V +I S
Sbjct: 683 IEARVNEVIQRNVP----RIEEREVPYEEAIARGAMALFGEKYGDRVRVITFDPN---FS 735
Query: 753 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
E C GTHV TG + +I S G+R ++ L G +
Sbjct: 736 MELCGGTHVAATGELGVFRIISEGSVASGIRRVEALAGQDA 776
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLG+ PY R AN+QKC+RV GKHNDL G D+YHHT
Sbjct: 32 VPQNDPTLLFTNAGMNQFKDVFLGIGTRPYKRAANTQKCLRVSGKHNDLEEVGPDTYHHT 91
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DY+KR+A R A E L + L DRLY T
Sbjct: 92 FFEMLGNWSFGDYFKREAIRWAWELLVE-RWGLDPDRLYAT 131
>gi|258575517|ref|XP_002541940.1| alanyl-tRNA synthetase [Uncinocarpus reesii 1704]
gi|237902206|gb|EEP76607.1| alanyl-tRNA synthetase [Uncinocarpus reesii 1704]
Length = 931
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 264/809 (32%), Positives = 394/809 (48%), Gaps = 116/809 (14%)
Query: 33 LVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCVRVGGKHND 87
LV SS +VP D ++ F N+GM Q+K++FLG A R NSQKC+R GGKHND
Sbjct: 41 LVPSSSVVPLSDPTLLFANAGMNQYKSIFLGTVDPNSDFAHLKRAHNSQKCIRAGGKHND 100
Query: 88 LSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQ 147
L G+DSYHHTFFEMLGNWSF DY+K++A + + + LTK L DRLY TYF G+
Sbjct: 101 LDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIQYSWDLLTKV-YGLEPDRLYVTYFEGNKD 159
Query: 148 YGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHYDMKGEPSSALA 207
G+ D ET+D+WL +GV DHI MK NFWEMG GPCG SE+HYD G ++A
Sbjct: 160 AGIEPDLETKDLWLGVGVKEDHILSGNMKDNFWEMGDQGPCGPCSEVHYDRIGGRNAAHL 219
Query: 208 RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDL 267
VN D +++EIWN VFI + R S + PL ++DTGLG+ERLV++LQ+K+S YDTD+
Sbjct: 220 -VNMDDPNVLEIWNNVFIQYNRESEKILRPLPNKHVDTGLGYERLVSVLQDKSSNYDTDV 278
Query: 268 FLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLR 327
F PL + I +++G +PY F + +DT+YR+++D+ R +T A++D P+ +
Sbjct: 279 FSPLFDVIREITGVRPYAGKFGEEDVDGIDTAYRVVADHVRTLTFAISDGAAPNNEGR-- 336
Query: 328 NVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDN 387
Y + +GD++PEI+ + IL EE F
Sbjct: 337 -------------------------GY-VWTQMGDMFPEIKKKQTDVMEILDEEEISFA- 369
Query: 388 LRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYD 447
K L + + + E + Q A++ ++ G + LYD
Sbjct: 370 ---------KTLDRGERQFE----------------IYAQQAKESGSGKLHGADVWRLYD 404
Query: 448 TYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK--AKAASN-----VPDIDLMDLK 500
T+G ++ Q +A + L++ + FE+ + KE SK AKAAS+ V D+ ++
Sbjct: 405 TFGFPVDLTQLMAEERGLSIDNTEFEEARLKAKEASKGQAKAASDLLKLTVHDLGKLEKD 464
Query: 501 HFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSI 560
+ P TDD S ++ + + ++ I G + AS + I
Sbjct: 465 NVPKTDD-----------SAKFGRGNIQSQILSIYHGKEFV-------------ASTNGI 500
Query: 561 QLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGN 620
+G+I DKTN YA GGQ DIG + + G + L + +
Sbjct: 501 SAGEQ--IGIILDKTNFYAEQGGQEYDIGKIIVDG--HRGVTFQFG-VPFLRPFVFYAKQ 555
Query: 621 VVSSFKVTPG-LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDEC 678
+ T G L R+ + R HT +H+LN ALR VL QK V +++
Sbjct: 556 ARQLPQATDGKLQERLLLTRPQRHEVSNNHTGTHILNFALREVLGNGIDQKGSLVAAEKL 615
Query: 679 ALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPD- 737
DFS + +S + +E + I V + + ++ +T + + GE YPD
Sbjct: 616 RFDFS-HKSAISDSDLEKIEAKSTEYIRQNCAVYSQDVPLAKAREITGVRAVFGETYPDP 674
Query: 738 ----------DVILIDISD-KENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIK 786
D IL D+ D + +S E C GTHV TG I+ ++ G+R I
Sbjct: 675 VRVVSVGVELDEILKDVKDPRWKGVSIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRII 734
Query: 787 CLTGDSS----KAAVENGKHLSTAASFSQ 811
+TG + + A E G+ L+ Q
Sbjct: 735 AVTGKDAHEVQRIAREFGERLNKFEKMEQ 763
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 48 VPLSDPTLLFANAGMNQYKSIFLGTVDPNSDFAHLKRAHNSQKCIRAGGKHNDLDDVGKD 107
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + + + LTK L DRLY T+
Sbjct: 108 SYHHTFFEMLGNWSFGDYFKKEAIQYSWDLLTK-VYGLEPDRLYVTY 153
>gi|432958468|ref|XP_004086045.1| PREDICTED: alanine--tRNA ligase, mitochondrial-like [Oryzias
latipes]
Length = 673
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 257/738 (34%), Positives = 380/738 (51%), Gaps = 102/738 (13%)
Query: 56 QFKNVFLGLTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFN 110
+FK VFLG A Y RV NSQKCVR GGKHNDL GRD YHHTFFEMLGNWSF
Sbjct: 4 EFKPVFLGTVDPRSQMASYRRVVNSQKCVRAGGKHNDLEDVGRDIYHHTFFEMLGNWSFG 63
Query: 111 DYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHI 170
DY+K +AC+MA LT+ +P DRLY +YFGG GLP DEETR+IWL+LGV I
Sbjct: 64 DYFKVEACQMAWSLLTEH-YGIPADRLYVSYFGGDAASGLPPDEETRNIWLDLGVSPGRI 122
Query: 171 KKEGMKCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRV 230
G++ NFWEMG +GPCG +EIH+D G +A VNA D++EIWN+VFI + R
Sbjct: 123 LPFGLEDNFWEMGDSGPCGPCTEIHFDHMGVRDAAFL-VNAGSPDVVEIWNLVFIQYNRE 181
Query: 231 SADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPY-GRTFT 289
++ L + +DTG+G ERLV++LQ K S YDTDLF PL++ I + SG PY GRT T
Sbjct: 182 PDRSLRLLPRFSVDTGMGLERLVSVLQGKRSNYDTDLFTPLMDAIHQRSGVGPYTGRTGT 241
Query: 290 TSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQG 346
+ +D +YR+++D+ R +++ +AD + P + LR ++R A+ V + QG
Sbjct: 242 EEG-SQVDLAYRVVADHIRTLSICIADGIHPGMSGAELVLRRILRRAVRFCIQVLQAPQG 300
Query: 347 KLVKELSYNIAEILGDVYPEIQDSINKIQLILGE-ESRIFDNLRKAAVKEWKPLVKTQPE 405
L L I ++LGD YPE++ ++I I+ E E++ +L++ + + L K
Sbjct: 301 ALAS-LVPTITQLLGDAYPELKQEEDRIVDIINENEAQFLASLQQGSRIIQRTLSKK--- 356
Query: 406 LEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKL 465
G K+ + +A+TL+ G +++ + + +
Sbjct: 357 --------------GCKH-----------SSFPASLAWTLHRDLGFPLDLVDMMLEERGV 391
Query: 466 TLCHEAFEQKLNELKERSKAKAASNVPDI--------DLMDLKHFPVTDDKYKYDYHYDT 517
+ + ++ L E ++ + K A + +L LK P TDD KY Y +
Sbjct: 392 QVNRQDLDRLLLENQKVASEKRAGLWSHVMLDLHILAELQRLK-VPHTDDSLKYQYGLEK 450
Query: 518 NSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNL 577
+ RY C T L C + ++ G +I D+T
Sbjct: 451 D--RYA--CSATVLA--------LCNGQTLVQEVSEGQR-----------CAVILDRTCF 487
Query: 578 YATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEV 637
Y+ GGQ D G YLT + ++ + L + G +VH V ++ ++ G ++ +
Sbjct: 488 YSEQGGQSHDRG--YLTCSRLQDVVFPVDGLLQVGGYVVH--QVTATDRLKTGDQVQLHL 543
Query: 638 DARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAA 696
D RL CM HT +H+LN ALR+VL +Q+ V +D DFSV G +LS+ +
Sbjct: 544 DQAHRLSCMVKHTATHILNFALRKVLGPSVHQRGSHVSADRLRFDFSVKG-SLSIPQLQQ 602
Query: 697 VEKYINDVI-ANQVQVDRRHMRASELPFLTHLTVIPG-----EIYPDDVILIDI------ 744
VE+ ++D++ ANQ+ + ELP + I G E+YPD V ++ +
Sbjct: 603 VERCVHDIVTANQM------VHTMELP-MQRAKSIRGLRTVDEVYPDPVRVVSLHVPVSE 655
Query: 745 ---SDKENVISREPCCGT 759
S + S E CCGT
Sbjct: 656 LLDSPPDKDTSVELCCGT 673
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 63/91 (69%), Gaps = 6/91 (6%)
Query: 834 QFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEMLGNWSFN 888
+FK VFLG A Y RV NSQKC+R GGKHNDL GRD YHHTFFEMLGNWSF
Sbjct: 4 EFKPVFLGTVDPRSQMASYRRVVNSQKCVRAGGKHNDLEDVGRDIYHHTFFEMLGNWSFG 63
Query: 889 DYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
DY+K +AC+MA LT+ +P DRLY ++
Sbjct: 64 DYFKVEACQMAWSLLTE-HYGIPADRLYVSY 93
>gi|354605297|ref|ZP_09023286.1| alanyl-tRNA synthetase [Alistipes indistinctus YIT 12060]
gi|353347876|gb|EHB92152.1| alanyl-tRNA synthetase [Alistipes indistinctus YIT 12060]
Length = 877
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 257/793 (32%), Positives = 398/793 (50%), Gaps = 98/793 (12%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
S IR++FL++F + H +V S+P++ D ++ F N+GM QFK++FLG +P + RVA
Sbjct: 3 SNQIRTTFLEFFKGKE-HLIVPSAPMIVKNDPTLMFTNAGMNQFKDLFLGNSPVRHKRVA 61
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E L + LP
Sbjct: 62 DSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLVEV-YGLP 120
Query: 134 LDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSE 193
DR+Y T F GS + G+ D E W + +P DHI NFWEMG TGPCG SE
Sbjct: 121 KDRIYATIFEGSPEEGIDRDNEAYTYWKQF-LPEDHILLGNKHDNFWEMGDTGPCGPCSE 179
Query: 194 IHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
IH+D++ + A VNA + +IEIWN+VF+ R + + PL ++DTG+GF
Sbjct: 180 IHFDLRDDAERAKLDGRELVNAGHHLVIEIWNLVFMQFNRKANGQLEPLPAQHVDTGMGF 239
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERL +LQ K S YDTD+F P ++ + ++G K YG+ D + R+++D+ R
Sbjct: 240 ERLCMVLQGKQSNYDTDVFQPTIQRLAAMAG-KTYGKD------AKADIAMRVIADHLRA 292
Query: 310 ITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
I ++AD P A +R ++R A+ + + K L + + +GD +PE
Sbjct: 293 IAFSIADGQLPSNVKAGYVIRRILRRAVRYGYTYLGFNEPFICK-LVEGLVQQMGDQFPE 351
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
++ + I ++ EE F LR A N+M+ GV K
Sbjct: 352 LRAQQDLITKVIAEEESAF--LRTLATG--------------INLMD------GVIAKAK 389
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
+ +D ISG AF LYDTYG ++I+ +A + + +AF ++L + KERS+
Sbjct: 390 EAGKDT----ISGSDAFLLYDTYGFPIDLIELIAHENGMKVDGDAFSKELQKQKERSRNA 445
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
AA + D ++ FP+++ K+ +G D
Sbjct: 446 AAVDTDDW----VELFPISESKF--------------------------VGYDSLEADVR 475
Query: 547 AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIG 606
R+ R ++ ++ + L+FD+T Y +GGQ+ D G+ + G V +
Sbjct: 476 ISRYRR-------VKTKNKTYYQLVFDQTPFYGNSGGQVGDQGI-----LESDGGTVRVT 523
Query: 607 ELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TC 665
+ VH +V + T VD ++R H+ +HL++ ALR VL T
Sbjct: 524 DTQKENNLTVH---IVENLPEDITATFHAVVDKQLRDASANNHSATHLMHKALRTVLGTH 580
Query: 666 TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIANQVQVDRRHMRASELPFL 724
QK V + DFS + + ++ + + VE+ +N D+ AN +RR E L
Sbjct: 581 VEQKGSLVTPEYLRFDFSHF-QKVTDEQIREVERLVNHDIRANFPLEERRDCPIDEARTL 639
Query: 725 THLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRS 784
+ + GE Y D V ++ D S E C GTHV TG+I ++G + + GVR
Sbjct: 640 GAMMLF-GEKYGDRVRVVKYGD-----SVELCGGTHVSATGNIGLFKIVGESAISAGVRR 693
Query: 785 IKCLTGDSSKAAV 797
I+ +TG +++ V
Sbjct: 694 IEAVTGLAAEQFV 706
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++FLG +P + RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDLFLGNSPVRHKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E L + LP DR+Y T
Sbjct: 92 LGNWSFGDYFKKEAISWAWELLVE-VYGLPKDRIYAT 127
>gi|384247147|gb|EIE20634.1| hypothetical protein COCSUDRAFT_67160 [Coccomyxa subellipsoidea
C-169]
Length = 1151
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 272/828 (32%), Positives = 414/828 (50%), Gaps = 99/828 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R++F+++F T+GHT V SS +VP+ D ++ F N+GM QFK +FLG A R
Sbjct: 216 VRATFVEFF-ETKGHTAVPSSSVVPHNDPTLLFANAGMNQFKPIFLGTVDPNSDFARLSR 274
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K++A A E LT+
Sbjct: 275 ACDSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEAIAWAWELLTQV-YK 333
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L RLY TYFGG GL DEE + WLEL +P + + G K NFWEMG GPCG
Sbjct: 334 LDPARLYATYFGGDSAQGLEPDEEAKSFWLEL-LPTERVLPFGCKDNFWEMGDVGPCGPC 392
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIHYD G +A VN D +++EIWNIVFI R + ++ PL ++DTG+G ER
Sbjct: 393 SEIHYDRIGSRDAA-HLVNMDDPNVLEIWNIVFIQFNREADASLRPLPAKHVDTGMGMER 451
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
+ ++LQ+K S Y TD+F P+ + I+ V+GA+ Y + D +YR+++D+ R ++
Sbjct: 452 VTSVLQDKVSNYATDIFTPIFDAIQTVTGARSYTDRVGKDDTDGKDMAYRVVADHIRTLS 511
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A+AD P + LR V+R A+ ++V K+G VK + +A G YPE+
Sbjct: 512 FAIADGAQPGNDGRNYVLRRVLRRAVRYGQEVLSAKEGFFVKLVDSVVAN-FGGFYPELI 570
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+ I ++ EE F Q +E+F K+
Sbjct: 571 AKRDHITDVIREEEASFSR-------------TLQKGIERF----------------KKA 601
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA- 487
A + S SG AF LYDTYG ++ + +A L L +AFE + E ++RS+A
Sbjct: 602 AANASGGSFSGKDAFELYDTYGFPMDLTELMAEEMGLKLDKKAFEACMEEQRQRSRAAGK 661
Query: 488 ASNVPDIDL-------MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
A P + + PVTDD S +YT + T + I
Sbjct: 662 AGGGPTLKFEAEATAHLANSGVPVTDD-----------SPKYTPGSVKTTVRAI------ 704
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
+ + +GA+ +G++ ++T YA +GGQ+ D G L +
Sbjct: 705 --LSASGFVDSTAGAA---------GPLGVVLERTPFYAESGGQVADSG--ELAGPSGAI 751
Query: 601 GKVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
V+ ++A+ G ++H G + +V +++ V++ R R+ + HT +H+LN AL
Sbjct: 752 FTVQDTKVAA--GYVLHVGEAAEGTLRVGDTVSADVDIIRRARI--VPNHTFTHVLNFAL 807
Query: 660 RRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R VL QK V + DFS +G + ++ +E N +A + + + +
Sbjct: 808 REVLGDHIDQKGSIVQPERLRFDFS-HGGPIDGPTLGKIEAICNQQLAADLGIFSKDVAL 866
Query: 719 SELPFLTHLTVIPGEIYPDDV-----------ILIDISDKENV-ISREPCCGTHVFNTGH 766
S+ + L + GE YPD V +L + +D EN S E C GTH+ +TG
Sbjct: 867 SDARQINGLRAVFGEQYPDPVRVVSIGKSVEDLLANTADPENAKYSVEFCGGTHLKSTGQ 926
Query: 767 IESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILN 814
+ ++ + GVR + +T ++AAV + L+ A +Q L
Sbjct: 927 ARAFALLSEEGIAKGVRRVVAVTSAEAEAAVARAEALTKAMEAAQKLT 974
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 69/107 (64%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG A R +SQKCIR GGKHNDL G+D
Sbjct: 238 VPHNDPTLLFANAGMNQFKPIFLGTVDPNSDFARLSRACDSQKCIRAGGKHNDLDDVGKD 297
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K++A A E LT+ L RLY T+
Sbjct: 298 VYHHTFFEMLGNWSFGDYFKKEAIAWAWELLTQ-VYKLDPARLYATY 343
>gi|268317116|ref|YP_003290835.1| alanyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
gi|262334650|gb|ACY48447.1| alanyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
Length = 953
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 264/818 (32%), Positives = 409/818 (50%), Gaps = 84/818 (10%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
S+ IR SFLD+F +GH +V S+P+VP D ++ F N+GM QFK+VFLG+ PY R
Sbjct: 6 SSEQIRQSFLDFF-REKGHEIVPSAPLVPQNDPTLLFTNAGMNQFKDVFLGIGTRPYKRA 64
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSL 132
AN+QKC+RV GKHNDL G D+YHHTFFEMLGNWSF DY+KR+A R A E L + L
Sbjct: 65 ANTQKCLRVSGKHNDLEEVGHDTYHHTFFEMLGNWSFGDYFKREAIRWAWELLVER-WGL 123
Query: 133 PLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
DRLY T G + GL D E ++W E + HIK K NFW MG TGPCG
Sbjct: 124 DPDRLYATVHEGDEALGLEPDVEAAELWKSETSIDPSHIKFCPTKDNFWMMGDTGPCGPC 183
Query: 192 SEIHYDMKGEPSS----ALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + + VNA +IEIWN+VFI + + + PL ++DTG+
Sbjct: 184 SEIHIDLRPDEERRRVPGIELVNAGDPRVIEIWNLVFIQYNALPDGRLEPLKAKHVDTGM 243
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVS---GAKPYG--RTFTTSNRTDLDTSYRM 302
G ER+V +LQ KTS YDTDLF P+L+ ++S + Y R R + + R+
Sbjct: 244 GLERIVAVLQGKTSNYDTDLFAPILQRAAELSPRDEVRGYDDIRVADERERERIRVALRV 303
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI 359
++D+ R I A+AD + P T + +R ++R A+ ++ L + L +A
Sbjct: 304 VADHIRAIAFAIADGVVPGNTGRGYVIRRILRRAVRYGYQTLGFREPFLYR-LVEPLAHK 362
Query: 360 LGDVYPEIQDSINKIQLILGEES---------------RIFDNLRKAAVKEWKPLVKTQP 404
+G V+PEI+ ++ ++ E R+ L+ AA E +P+ +
Sbjct: 363 MGRVFPEIERHRAYVERVIKAEEESFLATLGTGLAFFERLLPYLKAAA--EGRPIEAIRA 420
Query: 405 EL----EQFNIMEEPGL-VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQEL 459
+L + +++++ + + + + + + + G++AF L+DTYG ++ Q +
Sbjct: 421 DLLRDGQALDLLQKAYVDTSDREAIVEAFLKSAAEKNVPGEVAFLLHDTYGFPIDLTQLM 480
Query: 460 AAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNS 519
A + L + +E+ + ++R +A+AAS L T D+ + + +
Sbjct: 481 AREEGLGVDMARYEELME--RQRERARAASTFGAAVL--------TADEEEAGWKRVSEG 530
Query: 520 KRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYA 579
+ F DT V + IR R +IQ L+ D+T YA
Sbjct: 531 EDSVFVGYDTTRV-----------EDARIRAVR------TIQTPEGPRHELVLDQTPFYA 573
Query: 580 TAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVE--V 637
+GGQ+ D GV + + ++ + + L G IVH+ + ++ L + VE V
Sbjct: 574 ESGGQVGDTGVLRVGDE-----EIRVLDTQKLGGHIVHYVD-----RLPKELDAPVEAIV 623
Query: 638 DARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAA 696
DA R + HT +HLL+AALR +L T QK V D DFS + E ++ + +
Sbjct: 624 DAARRKRIEKHHTATHLLHAALREILGTHVQQKGSLVAPDRLRFDFSHF-ERVTPELLRQ 682
Query: 697 VEKYINDVIANQV-QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP 755
+E +N+VI V +++ R + E + + GE Y D V +I S E
Sbjct: 683 IEARVNEVIQRNVPRIEERDVPYEEAIARGAMALF-GEKYGDRVRVITFDPN---FSMEL 738
Query: 756 CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
C GTHV TG + +I S G+R ++ L G +
Sbjct: 739 CGGTHVAATGELGVFRIISEGSVASGIRRVEALAGQDA 776
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLG+ PY R AN+QKC+RV GKHNDL G D+YHHT
Sbjct: 32 VPQNDPTLLFTNAGMNQFKDVFLGIGTRPYKRAANTQKCLRVSGKHNDLEEVGHDTYHHT 91
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DY+KR+A R A E L + L DRLY T
Sbjct: 92 FFEMLGNWSFGDYFKREAIRWAWELLVE-RWGLDPDRLYAT 131
>gi|387597203|gb|EIJ94823.1| alanyl-tRNA synthetase [Nematocida parisii ERTm1]
Length = 947
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 281/838 (33%), Positives = 400/838 (47%), Gaps = 127/838 (15%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGL--TPAPYP---R 71
+RS+F++YF +GHT +SS + P D ++ F NSGM QFK FL L T PY R
Sbjct: 7 LRSAFIEYF-EKEGHTHWRSSSVSP-DDPTLLFTNSGMVQFKKKFLDLAITGTPYGELRR 64
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
N QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A FLT+ +
Sbjct: 65 ACNYQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIHFGWVFLTE-VLR 123
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DR+Y +YF G LPCD ET+++W + +P I G K NFWEMG GPCG
Sbjct: 124 LDKDRIYVSYFHGDPSQNLPCDTETQNLWRQY-LPDSRILGFGAKENFWEMGPVGPCGPC 182
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIHYD G A VN D D++EIWNIVFI + R + L K +IDTG+G ER
Sbjct: 183 SEIHYDRVG-GRDASGIVNQDDPDVLEIWNIVFIQYNR-EETGLAALPKKHIDTGMGLER 240
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
+++ILQ + S Y+TDLF+PL TI++V G + Y T D +YR+++D+SR +T
Sbjct: 241 VLSILQGEKSNYNTDLFMPLFRTIQRVLGVEEYTGILTDKK----DIAYRVIADHSRTLT 296
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
V+L DN+ P K +R ++R AL K G L+ L + +Y Q
Sbjct: 297 VSLMDNVMPSNDGKGYTIRKILRRALGFQYLHLKKSPG-LLPLLVEQVFNEFSQIYQTEQ 355
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+Q++ EE++ L K G+ L + L
Sbjct: 356 PLDAIVQVVREEEAQFTKTLGK-----------------------------GLSILMEML 386
Query: 429 A---RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
A + + G AF LYD YG ++ +A + + + F++ K SK
Sbjct: 387 ADAKKAGGRRILPGSSAFVLYDRYGFPIDLTMAVAEQEGVAVDSAGFKEAQAAAKALSKN 446
Query: 486 KAASN------VPDIDLMDL-KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
++ V D+D +D ++ T DKYKY P L + +
Sbjct: 447 NQKTSEGLHLTVHDLDALDRNQNKQPTVDKYKYSNE----------PILASAV------- 489
Query: 539 QVFCIDKHAIRHARSGASID-SIQLEHNA----WVGLIFDKTNLYATAGGQIDDIGVAYL 593
AI+H SG ID ++Q H G+I D+T+ Y+ +GGQ D G
Sbjct: 490 --------AIKH--SGEIIDFTVQSVHTHKSEDVCGIILDQTSFYSESGGQEGDKGTILF 539
Query: 594 TNTTQENGKVEIGELASLEGKIVH------------------FGNVVSSFKVTPGLTSR- 634
T T + I +L+ L + H +G V G T++
Sbjct: 540 TEPTDSDSADIIKKLSQLSIRTAHTQKGAGVHGVFTVQDTKKYGRYVMHMGRLEGSTTQN 599
Query: 635 ----VEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQ---KSCRVFSDECALDFSV-YG 686
V+ + R RL RAHT +HLLN AL +VL T K C E L F YG
Sbjct: 600 AVCMVDTERRERLA--RAHTATHLLNYALSQVLRKTGADEIKQCGSLVSEDLLRFDFHYG 657
Query: 687 ETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISD 746
L+ V+AVE IN+++ + V M +E + + + E YP+ V ++ + +
Sbjct: 658 SPLTKAEVSAVEGIINEIVEGKEGVSVEFMPYAEAIKIKGIRHMKDEEYPETVRVVSVRN 717
Query: 747 KEN--------VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
+ + S E C GTHV NTG I +IG S + GVR I L + + +A
Sbjct: 718 TSSKSTRTSTPITSAELCGGTHVINTGDIRRVRIIGESSISRGVRRISALCSEKAISA 775
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 68/103 (66%), Gaps = 6/103 (5%)
Query: 822 DDSIAFVNSGMCQFKNVFLGL--TPAPYP---RVANSQKCIRVGGKHNDLSFAGRDSYHH 876
D ++ F NSGM QFK FL L T PY R N QKCIR GGKHNDL G+D+YHH
Sbjct: 32 DPTLLFTNSGMVQFKKKFLDLAITGTPYGELRRACNYQKCIRAGGKHNDLDDVGKDTYHH 91
Query: 877 TFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
TFFEMLGNWSF DY+K++A FLT+ + L DR+Y ++
Sbjct: 92 TFFEMLGNWSFGDYFKKEAIHFGWVFLTE-VLRLDKDRIYVSY 133
>gi|410028193|ref|ZP_11278029.1| alanyl-tRNA ligase [Marinilabilia sp. AK2]
Length = 877
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 272/804 (33%), Positives = 394/804 (49%), Gaps = 107/804 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K IRS+F+++F + Q H V SSPIV D ++ F N+GM QFK+ FLG + R
Sbjct: 1 MEAKKIRSTFIEFFQSKQ-HQYVASSPIVVKNDPTLMFTNAGMNQFKDFFLGNDIPKFTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VANSQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+KR+A A E LT+
Sbjct: 60 VANSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKREAIEWAWELLTEV-YG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY + FGG L D E DIW + VP + I K NFWEMG TGPCG
Sbjct: 119 LPKDRLYVSVFGGDAGDNLEKDTEAFDIWKGI-VPENRILFGSKKDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGE----PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E + VN D +IEIWN+VF+ R++ ++ L ++DTG+
Sbjct: 178 SEIHIDLRTEEERNKENGYDLVNNDHPQVIEIWNLVFMQFNRLADGSLKELPAKHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV +Q K+S YDTD+F+P + +E SG K YGR T D + R++ D+
Sbjct: 238 GFERLVRAIQQKSSNYDTDVFMPFIHAVEMKSG-KSYGRDEKT------DIAMRVIVDHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I +AD P A +R ++R A+ F Q + EL +AE GD++
Sbjct: 291 RAIAFTIADGQLPSNNKAGYVIRRILRRAVRYGY-TFLGFQKPFLHELMPLLAENFGDIF 349
Query: 365 PEI---QDSINKIQLILGEES---RIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
PE+ QD I K+ I+ EES R DN K + + +VKT ++
Sbjct: 350 PELSAQQDFIAKV--IMEEESSFLRTLDNGLKKLDQIKEEMVKTGSQI------------ 395
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
I G +AF LYDTYG ++ +A ++ F +++
Sbjct: 396 ------------------IDGKVAFELYDTYGFPLDLTSLIARESGYSVDESGFAKEMEV 437
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
K RS+A A D L+ H + YDY + S+ + +
Sbjct: 438 QKTRSRAAAEQETGDWVLV---HEEEGVEFVGYDY-LQSQSRIVKYRQIK---------- 483
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
DK R+ L+ D+T YA +GGQ+ D G +L + +
Sbjct: 484 -----DKKGDRYQ------------------LVLDRTPFYAESGGQVGDQG--WLQSDRE 518
Query: 599 ENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
++++ + IVHF V P + +V+ + R M H+ +HL++AA
Sbjct: 519 ---RIQVLDTKRENDLIVHF---VDRLPTDPKVVFAAQVNEQKRRLTMSNHSATHLMHAA 572
Query: 659 LRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
LR VL QK V D DFS + + +S + +AAVE+ +N I + + +
Sbjct: 573 LREVLGGHVQQKGSLVNEDLLRFDFSHFAK-MSEEEIAAVEQIVNTKIRENIALGEQRNV 631
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E T + GE Y D V +I + S E C GTHV TG+I ++ S
Sbjct: 632 PIEEAKKQGATALFGEKYGDFVRVITF---DRHFSVELCGGTHVPATGNIGLFKIVSEGS 688
Query: 778 YNHGVRSIKCLTGDSSKAAVENGK 801
+ GVR I+ +T ++++ + NG+
Sbjct: 689 ISAGVRRIEAITANAAETYI-NGQ 711
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ FLG + RVANSQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDFFLGNDIPKFTRVANSQKCLRVSGKHNDLEEVGVDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+KR+A A E LT+ LP DRLY +
Sbjct: 92 LGNWSFGDYFKREAIEWAWELLTE-VYGLPKDRLYVS 127
>gi|403419671|emb|CCM06371.1| predicted protein [Fibroporia radiculosa]
Length = 921
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 267/809 (33%), Positives = 384/809 (47%), Gaps = 91/809 (11%)
Query: 33 LVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCVRVGGKHND 87
+V SS +PY D ++ F N+GM QFK++FLG A R NSQKC+R GGKHND
Sbjct: 1 MVPSSSTIPYEDPTLLFANAGMNQFKSIFLGTVDPQSELARLRRAFNSQKCIRAGGKHND 60
Query: 88 LSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQ 147
L G+DSYHHTFFEMLGNWSF A + E LT+ LP DRLY TYF G
Sbjct: 61 LEDVGKDSYHHTFFEMLGNWSF-------AIAFSWELLTEV-YQLPKDRLYVTYFEGDPL 112
Query: 148 YGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHYDMKGEPSSALA 207
GL D E R W+ G+ DHI K NFWEMG+TGPCG SEIH+D G ++A
Sbjct: 113 NGLDADNEARKFWIAQGIAEDHILPGNAKDNFWEMGATGPCGPCSEIHFDRIGGRNAAHL 172
Query: 208 RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDL 267
VN D D++EIWN VF+ + R ++ L ++DTG+GFERLV+I+Q K S YDTD+
Sbjct: 173 -VNKDDPDVLEIWNNVFMQYNREDDGSLRVLPAQHVDTGMGFERLVSIIQGKRSNYDTDI 231
Query: 268 FLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK-- 325
F P+ I++++GA+PY F + +DT+YR+++D+ R +T AL+D P+ +
Sbjct: 232 FTPIFSRIQELTGARPYQGKFGADDEDGVDTAYRVIADHVRTLTFALSDGGVPNNVGRGY 291
Query: 326 -LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRI 384
LR ++R + F V G L + + LGDV+PEI +IQ IL EE
Sbjct: 292 VLRRILRRGCRYARKKFGVNIGTFFSSLMPTVIQQLGDVFPEITKRTEEIQEILNEEE-- 349
Query: 385 FDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT--KQLARDPSITEISGDMA 442
E F+ + G L +Y++ KQ R +E+SG
Sbjct: 350 ----------------------ESFSRTLDRGERLFDQYVSRVKQQGR----SELSGKDV 383
Query: 443 FTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA---KAASNVPDIDLMDL 499
+ LYDTYG ++ + +A L + E F+ + KE SKA K +D+ D+
Sbjct: 384 WRLYDTYGFPVDLTRLMADELGLNVNDEEFDAAQAQSKEASKANPKKGDKEAIKLDVHDI 443
Query: 500 KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDS 559
T K D ++ +Y + N++ ++ AI RS + S
Sbjct: 444 AELEKTLGVAKTD-----DTTKY----MPGNVIAHIV----------AIYSNRSFVTSTS 484
Query: 560 IQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFG 619
+ G++ D+T+ YA +GGQ D G + + E+ + G ++H G
Sbjct: 485 TTSRDEDF-GIVLDRTSFYAESGGQEFDTGSIIIDGVAE----FEVANVQVFNGYVLHIG 539
Query: 620 NV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDE 677
++ +V + S D R HT +H+LN LR VL QK V +
Sbjct: 540 HLKYGDLQVGNEVIS--SYDELRRWPLRNNHTATHILNFCLRDVLGDHIDQKGSLVAPTK 597
Query: 678 CALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPD 737
DFS + + + +E+ D I V V + + + L + GE YPD
Sbjct: 598 LRFDFS-HKAQIPASELTRIEEMSRDWIRRNVPVYSKEVGLRVAQSIPGLRAVFGEAYPD 656
Query: 738 -----------DVILIDISD-KENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSI 785
D I+ DIS+ K S E C GTHV TG I V G+R I
Sbjct: 657 PVRVVSLGFDVDEIITDISNPKWRSTSIELCGGTHVMKTGDITDFIVTEESGIAKGIRRI 716
Query: 786 KCLTGDSSKAAVENGKHLSTAASFSQILN 814
+TG + A + L + + +N
Sbjct: 717 VAVTGHEAAQARQKANALQAQLNRLETMN 745
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 67/107 (62%), Gaps = 13/107 (12%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D ++ F N+GM QFK++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 8 IPYEDPTLLFANAGMNQFKSIFLGTVDPQSELARLRRAFNSQKCIRAGGKHNDLEDVGKD 67
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF A + E LT+ LP DRLY T+
Sbjct: 68 SYHHTFFEMLGNWSF-------AIAFSWELLTE-VYQLPKDRLYVTY 106
>gi|311747311|ref|ZP_07721096.1| alanine--tRNA ligase [Algoriphagus sp. PR1]
gi|311302637|gb|EAZ83190.2| alanine--tRNA ligase [Algoriphagus sp. PR1]
Length = 874
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 272/797 (34%), Positives = 389/797 (48%), Gaps = 106/797 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K IRS+F+++F + Q H V SSPIV D ++ F N+GM QFK+ FLG + R
Sbjct: 1 MEAKKIRSTFIEFFQSKQ-HQYVPSSPIVVKNDPTLMFTNAGMNQFKDAFLGNETPKFAR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VANSQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT
Sbjct: 60 VANSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIEWAWELLT-VVFK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP +RLY + F G GL D E + W ++ VP D I K NFWEMG TGPCG
Sbjct: 119 LPKERLYVSVFEGDQGDGLSLDTEAYNFWKKI-VPEDRIIMGSKKDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P + LA VN D +IEIWN+VF+ + R+S ++ L ++DT
Sbjct: 178 SEIHIDLR--PEAELAEIPGKDLVNNDHEQVIEIWNLVFMQYNRLSDGSLKELPAKHVDT 235
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV +Q K+S YDTDLF P L I K SG K YG N D ++R++ D
Sbjct: 236 GMGFERLVRAIQQKSSNYDTDLFAPFLNAIAKKSG-KVYG------NDEQTDIAFRVIVD 288
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I+ +AD P A +R ++R A+ F Q + EL+ IAE GD
Sbjct: 289 HIRAISFTIADGQLPSNNKAGYVIRRILRRAVRYGYTFFGF-QEPFLYELTSLIAEHFGD 347
Query: 363 VYPEI---QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
V+PE+ Q+ I+K+ I EE+ L K L + + EL++ N
Sbjct: 348 VFPEVRQQQEFISKV--IYEEEASFLRTLENG----LKILDQIKAELQEKN--------- 392
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
T I G AF LYDT+G ++ +A L+L + F ++ +
Sbjct: 393 --------------DTVIPGKTAFELYDTFGFPLDLTSLIARENGLSLDEKGFLAEMEKQ 438
Query: 480 KERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
K RS+A + S D L+ H D +G +
Sbjct: 439 KTRSRAASESETGDWVLV----------------HEDEG----------VEFIGYDFLES 472
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
I K+ + + G ++ DKT YA +GGQ+ D G +L + +
Sbjct: 473 FSNIIKYRVVKEKKGEKYQ-----------VVLDKTPFYAESGGQVGDKG--WLIS---D 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
N K+ + + I+H +V P + EVD + R M HT +HLL +AL
Sbjct: 517 NEKIRVIDTKKENDLIIH---LVDKLPSNPEVKFSAEVDRKGRALSMNNHTATHLLQSAL 573
Query: 660 RRVLTCTYQKSCRVFS-DECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ-VDRRHMR 717
+ VL Q+ + S D DFS +G+ L+ + + VE+ +N I + V++R++
Sbjct: 574 KEVLGDHIQQRGSLVSPDLLRFDFSHFGK-LTEEEITKVEEIVNTKIRENIPLVEKRNVP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E + T + GE Y D V +I S E C GTHV T I + S
Sbjct: 633 IEEAKSMG-ATALFGEKYGDFVRVITFDPD---FSVELCGGTHVPYTSQIGLFKITSEGS 688
Query: 778 YNHGVRSIKCLTGDSSK 794
GVR I+ +T +++
Sbjct: 689 SASGVRRIEAITAKAAE 705
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ FLG + RVANSQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDAFLGNETPKFARVANSQKCLRVSGKHNDLEEVGVDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT LP +RLY +
Sbjct: 92 LGNWSFGDYFKKEAIEWAWELLT-VVFKLPKERLYVS 127
>gi|378755135|gb|EHY65162.1| alanyl-tRNA synthetase [Nematocida sp. 1 ERTm2]
Length = 946
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 276/836 (33%), Positives = 407/836 (48%), Gaps = 133/836 (15%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPA-----P 68
+ +R++F +YF +GHT +SS + P D ++ F NSGM QFK FL L PA
Sbjct: 4 ANKLRNAFTEYF-EKEGHTHWRSSSVNP-DDPTLLFTNSGMVQFKKKFLDLAPADTAYGQ 61
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
R N QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A A FLT+
Sbjct: 62 MKRACNYQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIHFAWTFLTEV 121
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
+ L DR+Y +YF G GLPCD E++++W + +P I G K NFWEMG GPC
Sbjct: 122 -LKLDKDRIYVSYFNGDPSQGLPCDTESQELWRQY-LPDSRILGFGAKENFWEMGLVGPC 179
Query: 189 GYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
G SEIHYD + G +S + VN D D++EIWN+VFI + R + V L K +IDTG+
Sbjct: 180 GPCSEIHYDRIGGRDASGI--VNQDDPDVLEIWNVVFIQYNREESGLSV-LPKKHIDTGM 236
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTD--LDTSYRMLSD 305
G ER+++ILQN+ S Y+TDLF+PL +TIE+V G +PY ++R D D +YR+++D
Sbjct: 237 GLERVLSILQNEKSNYNTDLFVPLFKTIERVLGVEPY------TDRLDSKKDIAYRVIAD 290
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+SR +T++L DN+ P + K +R ++R AL K G L+ L+ +
Sbjct: 291 HSRTLTISLMDNVMPSSDGKGYTIRKILRRALGFQYLHLKKAPG-LLPILAEQVFGDFSQ 349
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
VY + +Q+I EE++ L K GL + +
Sbjct: 350 VYQTELSAQAIVQIITEEEAQFTKTLSK-------------------------GLSILMD 384
Query: 423 YL-TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
L T + D + + G AF LYD YG ++ +A + + + + F++ K
Sbjct: 385 MLETAKNVEDGAKKVLPGASAFVLYDRYGFPIDLTMAVAEQEGVAVDVDGFKEAQAAAKA 444
Query: 482 RSKAKAASN------VPDIDLMD--LKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
SK S V D+D +D LK P T D+YKY
Sbjct: 445 LSKGTQKSTESLHLTVHDLDALDKALKKRP-TVDRYKYSEE------------------- 484
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNA---WVGLIFDKTNLYATAGGQIDDIGV 590
I + ++G + +LE+ A G+I D+T+ Y+ AGGQ D G
Sbjct: 485 --------PISARTVAVKQAGEIVSVSELENPAPAGEFGVILDQTSFYSEAGGQEGDAGT 536
Query: 591 AYLTNTTQENGKVEIGELASL---------EGKI----------------VHFGNVVSSF 625
T+ T ++ + + L EG I +H G + S
Sbjct: 537 IIFTHKTAKDAGDLVRMFSGLTVKNTKTPKEGNISGIFTVRDTKNYGRYVMHIGTLEGS- 595
Query: 626 KVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQKSCR-----VFSDECAL 680
+T ++V R RL AHT +HLLN AL + L+ + R V D
Sbjct: 596 -ITESAVCTIDVGRRRRLA--HAHTGTHLLNYALSQTLSKAGGEEIRQCGSLVSEDLLRF 652
Query: 681 DFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVI 740
DF Y LS ++AVE+ IN ++ + V ++ + + + + E YP+ V
Sbjct: 653 DFH-YNAPLSKAEISAVEEIINSIVERKEAVTVEYLPYTSAVRIEGIRHMKDEEYPETVR 711
Query: 741 LIDIS---DKEN-----VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCL 788
++ + DK N + S E C GTHV NTG I ++G S + G+R I +
Sbjct: 712 VVSVKNTLDKSNARTSTITSAELCGGTHVENTGDIGRFRIVGESSISRGIRRITAV 767
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 68/103 (66%), Gaps = 6/103 (5%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPA-----PYPRVANSQKCIRVGGKHNDLSFAGRDSYHH 876
D ++ F NSGM QFK FL L PA R N QKCIR GGKHNDL G+D+YHH
Sbjct: 32 DPTLLFTNSGMVQFKKKFLDLAPADTAYGQMKRACNYQKCIRAGGKHNDLDDVGKDTYHH 91
Query: 877 TFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
TFFEMLGNWSF DY+K++A A FLT+ + L DR+Y ++
Sbjct: 92 TFFEMLGNWSFGDYFKKEAIHFAWTFLTE-VLKLDKDRIYVSY 133
>gi|189499310|ref|YP_001958780.1| alanyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
gi|189494751|gb|ACE03299.1| alanyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
Length = 886
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 264/809 (32%), Positives = 400/809 (49%), Gaps = 125/809 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR SFLDYF + HT+V+S+P++P D ++ F N+GM QFK+VFL PY R
Sbjct: 1 MKSSDIRQSFLDYFEKKE-HTIVRSAPVIPAEDPTLLFTNAGMNQFKDVFLDKGSRPYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A++QKC+R GKHNDL GRD+YHHTFFEMLGNWSF DYYK++A A E LT+ S
Sbjct: 60 AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKKEAIAWAWELLTE-VWS 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RLY T + D+E+ +IW + DHI K G K NFWEMG TGPCG
Sbjct: 119 LPKERLYATVY--------QDDDESLEIWKTATDIDPDHIMKFGDKDNFWEMGETGPCGP 170
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIH D+ + S VNAD + +IE+WN+VFI + R + ++ PL K ++DTG+GFE
Sbjct: 171 CSEIHIDLT-DDLSGRELVNADDHRVIELWNLVFIQYNRKADRSLEPLPKKHVDTGMGFE 229
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +LQ+K S YDTD+F PL + I +G +T + + D + R+++D++R +
Sbjct: 230 RITAVLQSKGSNYDTDIFAPLFDAITAHTGV-----AYTATLDGERDMAMRVIADHARTL 284
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
T A+ D P + LR ++R A+ + + Q L + L IA+ +G V+PE+
Sbjct: 285 TFAITDGAVPGNEGRGYVLRRILRRAVRYARKL-DCNQPVLYR-LVGVIADTMGAVFPEL 342
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ ++ I+ E F LV +E F G + +K+
Sbjct: 343 KKQQATVEKIVKSEEESF-------------LVTLGRGIEIF------GEIAAALKASKE 383
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
+ ISG+ AF LYDTYG ++ + +A+ + L + + F + E KER++
Sbjct: 384 KS-------ISGEDAFRLYDTYGFPLDLTRLMASEEGLGVDEKGFGACMKEQKERAR--- 433
Query: 488 ASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHA 547
D K K D ++ + + +G + +
Sbjct: 434 -----------------KDRKQKQQITGDEGQWQW----FEQKGPTVFLGYETLETEAQI 472
Query: 548 IRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN------TTQENG 601
I G I Q++ L+ D+T YA +GGQ D G N T+++G
Sbjct: 473 I-----GVRIAGSQMQ------LVLDQTPFYAESGGQTGDRGRIEGENYIFDVIDTRKDG 521
Query: 602 KVEIGELASLEGKIVHFGNVV----SSFKVTP-------GLTSRVEVDARMRLGCMRAHT 650
V IVH V + +VTP + + +VD R R HT
Sbjct: 522 DV-----------IVHVAGTVYDRATGGEVTPESIAFSQAVQVQAQVDKETREATERNHT 570
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+HLL+AALR+VL QK V D DFS + E +S + AVE +N+ I
Sbjct: 571 ATHLLHAALRKVLGEHVQQKGSLVGPDRLRFDFSHF-EKVSAGELEAVEAEVNERIREAG 629
Query: 710 QVDRRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTG 765
+ ++ +++P+ L G+ Y D V ++++ +S E C GTHV N G
Sbjct: 630 AL----VKHADIPYEAALEKGALAFFGDKYADRVRVVEVPG----VSMELCGGTHVSNVG 681
Query: 766 HIESCTVIGYKSYNHGVRSIKCLTGDSSK 794
I ++ S G+R I+ ++G +++
Sbjct: 682 QIGLFKIMSESSIASGIRRIEAMSGKAAE 710
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFL PY R A++QKCIR GKHNDL GRD+YHHT
Sbjct: 28 IPAEDPTLLFTNAGMNQFKDVFLDKGSRPYSRAADTQKCIRASGKHNDLEDVGRDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK++A A E LT+ SLP +RLY T
Sbjct: 88 FFEMLGNWSFGDYYKKEAIAWAWELLTE-VWSLPKERLYAT 127
>gi|170594914|ref|XP_001902174.1| alanyl-tRNA synthetase family protein [Brugia malayi]
gi|158590293|gb|EDP28977.1| alanyl-tRNA synthetase family protein [Brugia malayi]
Length = 863
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 265/819 (32%), Positives = 391/819 (47%), Gaps = 86/819 (10%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLT----- 65
RL ++ IR SFL+YF HT V SS ++P D S+ FVN+GM QFK +FLG
Sbjct: 54 RLSAQQIRLSFLEYF-KEHNHTYVPSSSVIPEDDSSVTFVNAGMNQFKPLFLGAKYTEGK 112
Query: 66 PAPYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
A V N QKC+R+GGKHND GRD HHTFFEMLGN+SF Y K +AC A FL
Sbjct: 113 LAALRNVVNWQKCIRIGGKHNDFDDVGRDLTHHTFFEMLGNYSFGGYSKMEACLYAWNFL 172
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
T + +P DRLY TYFGG + L D E RDIW++LGVP D + NFWEM T
Sbjct: 173 TDV-LKIPADRLYITYFGGDESMKLKEDRECRDIWIKLGVPEDRVLGFCSNHNFWEMAQT 231
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG SEIHYD+ G A VN+ ++EIWN+VF+ R + I L YID
Sbjct: 232 GPCGPCSEIHYDLIGN-RKAQKLVNSSNPTVVEIWNLVFMQFSRDISGKISSLPTLYIDC 290
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV+I+Q S YDTDLFLPL+ I + S + YG D+DT+YR+++D
Sbjct: 291 GMGFERLVSIVQGLHSAYDTDLFLPLMRIIHEYSKVRGYGGQL-----GDIDTAYRIVAD 345
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R + ++D + P + + LR V+R A L ++G +L
Sbjct: 346 HLRAACIMISDGVEPSSRNRGYHLRRVLRRAALNFTLTLGAERG------------MLAS 393
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+ P D +N I L+ + + K + E + ++ + G K
Sbjct: 394 LVP---DFVNHITLLYNNVAACETVIAKTVMSEEQLFWRSYDK--------------GCK 436
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L +A + +SG++A+ L TYGL +I Q++ K L + + F+Q L ++
Sbjct: 437 LLEHNIASQQHV--LSGEIAWMLSGTYGLPLSITQKICREKGLKVDVDGFQQCLANFQKA 494
Query: 483 SKAKAA-SNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI--VIGDQ 539
KA+ D++ M L T+D KY +Y FP +V I V G
Sbjct: 495 QKAEEELWQKIDLEEMILNGVEPTNDSEKYCCE-RIELGKYEFPSRTGTVVAIFDVNGKN 553
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY--LTNTT 597
V ++ + ++ D T +A GGQ+ D G+ L NT
Sbjct: 554 VMSLNPGELG-------------------SVVMDSTIFFAEQGGQLYDRGILQDNLNNTI 594
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+ + G I+H G V + + G+ +D + R M HT +H+L+
Sbjct: 595 -----FIVNSVKRRNGYIIHTGKVADNGILEKGVNLTQIIDPKQRFFLMCGHTATHILHF 649
Query: 658 ALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
AL +V + Q + D+ DF + + ++++ + V +N++I + + V +++
Sbjct: 650 ALEKVFGVSVRQMGSFIGPDKLHFDFFIPDQKIALEKIEKVMAMVNNIIESNINVTVKYI 709
Query: 717 RASELPFLTHLTVIPGEIYPD-------DVILIDISDKENVISREPCCGTHVFNTGHIES 769
EL L H +I + +I ++ S EPCCGTHV NT I
Sbjct: 710 LQEELGSL-HKDFSAFDISQEASSNGSYRIITVESSALLGQDIIEPCCGTHVLNTSDIGR 768
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
+IG KS VR I +T ++ ++ N L S
Sbjct: 769 FVIIGQKSRGANVRRIYAVTNSAALESIHNATKLKDELS 807
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 67/107 (62%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLT-----PAPYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D S+ FVN+GM QFK +FLG A V N QKCIR+GGKHND GRD
Sbjct: 82 IPEDDSSVTFVNAGMNQFKPLFLGAKYTEGKLAALRNVVNWQKCIRIGGKHNDFDDVGRD 141
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGN+SF Y K +AC A FLT + +P DRLY T+
Sbjct: 142 LTHHTFFEMLGNYSFGGYSKMEACLYAWNFLTD-VLKIPADRLYITY 187
>gi|209877330|ref|XP_002140107.1| alanyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
gi|209555713|gb|EEA05758.1| alanyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
Length = 984
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 276/847 (32%), Positives = 417/847 (49%), Gaps = 92/847 (10%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP- 66
S ++ K++R F+D+F N H +S+ ++P D ++ F N+GM QFK++F
Sbjct: 7 SKLKWTGKNVRQQFIDFFVNKANHKFYRSASVIPLNDPTLLFTNAGMNQFKSIFTETVEP 66
Query: 67 ----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMAL 122
+ RV NSQKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K +A + A
Sbjct: 67 NSELSKLVRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKEEAIKWAF 126
Query: 123 EFLTKPPVSLPLDRLYFTYFGGSDQY-GLPCDEETRDIWLELGVPRDHIKKEGMKCNFWE 181
E LTK +P +RLY TYFGG D+ P DEE RDIW+ +P++ I K NFWE
Sbjct: 127 ELLTK-VYEIPSERLYVTYFGGDDKLPACPVDEEARDIWMNY-LPKERIISCSAKENFWE 184
Query: 182 MGSTGPCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
M GPCG SEIH+D + G +S L VN D +IEIWN+VF+ + R + ++V L
Sbjct: 185 MADVGPCGPCSEIHFDRIGGRDASHL--VNKDDPSVIEIWNLVFMQYYRETDGSLVLLPA 242
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPY--GRTFTTSNRTDLDT 298
+DTG+G ERLV++LQNK S YDTDLF+P+ I + P G + +D
Sbjct: 243 KCVDTGMGLERLVSVLQNKLSNYDTDLFIPIFNQIHSIFPNIPQYKGMVGDKDDPNKIDM 302
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFK--VKQGKLVKELS 353
SYR+++D+ R ++VA++D P + LR ++R A+ F + +L
Sbjct: 303 SYRVIADHIRTLSVAISDGCIPSNEGRGYVLRRILRRAVRYGRQYFNAGMDGNMWFYKLV 362
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+++ ILGD YPEI + + I+ + EE + F K L K +E+FN +
Sbjct: 363 DSVSNILGDYYPEIVEKKDTIKSAIFEEEKQFS----------KTLGKG---IERFNRVT 409
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
L+ + +L I + AF LY TYG ++ + +A+ + HE F+
Sbjct: 410 NK-LLKSSSPINSKLKNIRLI--FPANEAFQLYSTYGFPMDLTELIASELGMEFDHEGFK 466
Query: 474 QKLNELKERSKAKAASNV------PDIDLMDLKHFP--VTDDKYKYDYHYDTNSKRYTFP 525
+ + + S+ K + PDI L + +TDD YKY+ + + K
Sbjct: 467 KCMENHQLASEGKFNKKLDKLVLKPDIQQHILLKYGLNLTDDIYKYNLNNECFGK----- 521
Query: 526 CLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQI 585
L I G ++ ID+ H VGLIFDKT Y+ +GGQ+
Sbjct: 522 -----LFAIYNGHEL----------------IDTATCFH-GIVGLIFDKTCYYSESGGQV 559
Query: 586 DDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
DIG L N ++ + ++H G V+ +D R+
Sbjct: 560 SDIGYIELWEDNLNN--FQVIDCQKFGNYVLHIGVVLEGKFSVGDSNCHFLIDKDRRVMT 617
Query: 646 MRAHTTSHLLNAALRRVL--TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIND 703
MR HT +HLLN ALR +L C Q+ V + DFS + L+++ + +E IN
Sbjct: 618 MRNHTATHLLNYALRLLLGEKCD-QRGSIVEPTKLRFDFSA-NKALNINEIQQIEDIINK 675
Query: 704 VIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVI------------ 751
+I ++ +V + + ++ L I GE YPD V ++ + N +
Sbjct: 676 IIKDKQEVFCDVVPLNIAKEISGLRAIFGEAYPDPVRVLSVGIPVNELNDCNFGASKSLH 735
Query: 752 ---SREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
S E C GTHV NT I S ++ + G+R I +T D++ A +N L +
Sbjct: 736 IKTSVELCGGTHVLNTYDIGSFIILSEEGIAKGIRRIVAVTNDTANVAEDN--TLILTSK 793
Query: 809 FSQILNV 815
F Q+ N+
Sbjct: 794 FEQLKNI 800
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK++F + RV NSQKCIR GGKHNDL G+D
Sbjct: 39 IPLNDPTLLFTNAGMNQFKSIFTETVEPNSELSKLVRVVNSQKCIRAGGKHNDLDDVGKD 98
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K +A + A E LTK +P +RLY T+
Sbjct: 99 VYHHTFFEMLGSWSFGDYFKEEAIKWAFELLTK-VYEIPSERLYVTY 144
>gi|342878270|gb|EGU79625.1| hypothetical protein FOXB_09908 [Fusarium oxysporum Fo5176]
Length = 959
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 266/853 (31%), Positives = 411/853 (48%), Gaps = 96/853 (11%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPA 67
S ++ + +R +FL+YF +GHT+V SS +VP+ D ++ F N+GM QFK +FLG
Sbjct: 4 SELKWPAARVRKTFLEYF-EQRGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTIGK 62
Query: 68 PYPRVA-----NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMAL 122
P +SQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A +
Sbjct: 63 TDPMAGLKAAVDSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAISYSW 122
Query: 123 EFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEM 182
E LTK L DRLY TYF G ++ L D E +++WL +GVP DHI MK NFWEM
Sbjct: 123 ELLTKI-YGLDPDRLYVTYFEGDEKLKLEPDLEAKELWLSVGVPEDHILPGNMKDNFWEM 181
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
G GPCG SEIHYD G +A + VN D ++E+WN VF+ + R ++ L +
Sbjct: 182 GDQGPCGPCSEIHYDKVGGGRNAASLVNMDDPMVVEVWNNVFMQYDRQKDGSLKSLPAKH 241
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRM 302
IDTG+G+ERLV+ LQ+ S Y TD F PL + I++V+GA+PY + + +DT+YR+
Sbjct: 242 IDTGMGYERLVSALQDTVSNYATDCFTPLFQKIQEVTGARPYADKYGKDDADGIDTAYRV 301
Query: 303 LSDYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI 359
++D+ R ++ ++AD P+ +R V+R + + F G ++ + +
Sbjct: 302 VADHIRTLSFSIADGAVPNNDGRGYVVRRVLRRGVRYARKYFNADIGAFFSKILPALVDQ 361
Query: 360 LGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
+G+ +PE+ I+ IL EE F + L + + + E++ G
Sbjct: 362 MGEQFPELVKKQQDIKEILDEEEVAFA----------RTLDRGEAQFEKYAAEATKG--- 408
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
G K L GD+ + LYDT+G ++ + +A + L + E +
Sbjct: 409 GSKKL-------------EGDVVWRLYDTFGFPVDLTRLMAEERSLEIDDAEVEAARIKA 455
Query: 480 KERSKAKAAS-------NVPDIDLM--DLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
+E SKA S NV I + DLK T+D K+ DT K
Sbjct: 456 REASKAVKESVQTFSKLNVHQISELEKDLK-VERTNDDAKF-AQGDTKGK---------- 503
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
V ++ Q F + + +GL+ DKTN YA +GGQ+ D G
Sbjct: 504 -VQLIYDGQSFLKSTKDVPEKTA--------------LGLLIDKTNFYAESGGQVADTGR 548
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ + + ++ ++ + G I+H G + ++ G E D R H+
Sbjct: 549 IVIDDVAE----FKVLDVQNYGGYILHSG-YIEYGTLSSGDEVICEYDELRRSPIRNNHS 603
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H+LN +LR VL QK V +++ DFS + + ++ + +E N I +
Sbjct: 604 GTHILNHSLREVLGDDVNQKGSLVDNEKLRFDFS-HKTGVKIEELKKIEDMSNAYIRRKD 662
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISDKE-NVISREPCC 757
++ + + + + GE YPD D +L D KE S E C
Sbjct: 663 KIFSKEVDLELARQIEGCRAVFGETYPDPVRVVSIGRDIDEMLADPKKKEWRQYSVEFCG 722
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGN 817
GTHV TG I+ +I G+R I TG+++ S +I +
Sbjct: 723 GTHVEQTGLIKDLILIEESGIAKGIRRIIAYTGEAAHQVQREADEFS-----KKIDALDK 777
Query: 818 IPYGDDSIAFVNS 830
+P+G + A V +
Sbjct: 778 LPFGPEKEAQVKA 790
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA-----NSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P +SQKCIR GGKHNDL G+D
Sbjct: 35 VPHNDPTLLFTNAGMNQFKPIFLGTIGKTDPMAGLKAAVDSQKCIRAGGKHNDLDDVGKD 94
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LTK L DRLY T+
Sbjct: 95 SYHHTFFEMLGNWSFGDYFKKEAISYSWELLTK-IYGLDPDRLYVTY 140
>gi|345566669|gb|EGX49611.1| hypothetical protein AOL_s00078g100 [Arthrobotrys oligospora ATCC
24927]
Length = 940
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 265/831 (31%), Positives = 387/831 (46%), Gaps = 83/831 (9%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R +F+++F +GH KSSP VP D ++ F N+GM QFK +FLG R
Sbjct: 27 VRQTFIEFF-EKKGHVFYKSSPCVPLDDKTLLFANAGMNQFKPIFLGTVDETSDFGKLKR 85
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
N+QKC+R GGKHNDL G DSYHHTFFEMLGNWSF DY+K +A + E LTK
Sbjct: 86 ACNTQKCIRAGGKHNDLEDVGSDSYHHTFFEMLGNWSFGDYFKTEAVAYSWELLTKV-YG 144
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L RLY TYF G GL D ET+++W + GVP DHI +K NFWEMG GPCG
Sbjct: 145 LDPARLYVTYFEGDRASGLEPDLETKELWRKAGVPDDHILPGNVKDNFWEMGDQGPCGPC 204
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
+E+HYD G ++A VN D +++EIWN VFI R T+ PL ++DTG+GFER
Sbjct: 205 TEVHYDRIGGRNAA-KLVNNDDPNVLEIWNNVFIQFNRGEDKTLKPLPHKHVDTGMGFER 263
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV+ILQ+K+S YDTD+F PL I++V+ + Y F + +D +YR+++D+ R ++
Sbjct: 264 LVSILQDKSSNYDTDVFKPLFLKIQEVAKIRSYEGKFGHEDVDSIDKTYRVVADHLRTLS 323
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
+AD PD + LR +VR + KV G L + E LG +PE++
Sbjct: 324 FGIADGGRPDNDGRGYVLRRIVRRGARYARKFMKVNIGSFFSSLLPALVEQLGPTFPELK 383
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+ I+ +L E F + L + + + EQ +L
Sbjct: 384 EHQALIKKLLDMEEESFA----------RTLDRGEKKFEQL----------------AEL 417
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAA 488
A + T I+G + LYDTYG ++ +A + + + + KE SK K
Sbjct: 418 AT-TTKTPIAGHEVWKLYDTYGFPLDLTYIMAEESSVKIDTDGVLVAEKKAKEISKVKKV 476
Query: 489 SNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAI 548
+ I + L D H K P + + + GD+ D +
Sbjct: 477 --IDGITRLTL------------DVHALAALKEENIPAAN-DEAKFLWGDEAILRDSKIL 521
Query: 549 R-HARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI-G 606
+ + G + LE + VG++ DKT LYA GGQI D G T GK EI
Sbjct: 522 KIFVKEGFVKSTEGLEDDVQVGILLDKTCLYAEQGGQIYDFG------TISIPGKSEIFV 575
Query: 607 ELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTC- 665
+ GK V + G +VE D R HT +H+LN AL+ VL
Sbjct: 576 DHVVYHGKYALHSGTVKYGTLKVGDVVQVEYDEARRSLIRVNHTATHVLNYALKEVLAKN 635
Query: 666 ---TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
+Q+ V + D S G +S + + VE N I +V V + +
Sbjct: 636 GGEVHQRGSLVDQLKTRFDISWDG-PISPEQIEKVENESNSYINQKVAVYTKEIDIKTAQ 694
Query: 723 FLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHVFNTGHIESC 770
+T + + GE YPD V ++ + N+I P C GTH+ I
Sbjct: 695 AITGVRAVFGEKYPDPVRVVSLGIDLNLIVENPTDPQWAKVSIEFCGGTHLKTVSDITEM 754
Query: 771 TVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIPYG 821
+ G+R + C+T + + G + +++ V +P+G
Sbjct: 755 VITEESGIGKGIRRVVCVTNE-----IAAGIRVLEREIAAKLKEVDEMPFG 800
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK +FLG R N+QKCIR GGKHNDL G D
Sbjct: 49 VPLDDKTLLFANAGMNQFKPIFLGTVDETSDFGKLKRACNTQKCIRAGGKHNDLEDVGSD 108
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K +A + E LTK L RLY T+
Sbjct: 109 SYHHTFFEMLGNWSFGDYFKTEAVAYSWELLTK-VYGLDPARLYVTY 154
>gi|387593549|gb|EIJ88573.1| alanyl-tRNA synthetase [Nematocida parisii ERTm3]
Length = 947
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 280/838 (33%), Positives = 399/838 (47%), Gaps = 127/838 (15%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGL--TPAPYP---R 71
+RS+F++YF +GHT +SS + P D ++ F NSGM QFK FL L T PY R
Sbjct: 7 LRSAFIEYF-EKEGHTHWRSSSVSP-DDPTLLFTNSGMVQFKKKFLDLAITGTPYGELRR 64
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
N QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A FLT+ +
Sbjct: 65 ACNYQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIHFGWVFLTE-VLR 123
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DR+Y +YF G LPCD ET+++W + +P I G K NFWEMG GPCG
Sbjct: 124 LDKDRIYVSYFHGDPSQNLPCDTETQNLWRQY-LPDSRILGFGAKENFWEMGPVGPCGPC 182
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIHYD G A VN D D++EIWNIVFI + R + L K +IDTG+G ER
Sbjct: 183 SEIHYDRVG-GRDASGIVNQDDPDVLEIWNIVFIQYNR-EETGLTALPKKHIDTGMGLER 240
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
+++ILQ + S Y+TDLF+PL TI++V G + Y D +YR+++D+SR +T
Sbjct: 241 VLSILQGEKSNYNTDLFMPLFRTIQRVLGVEEYTGILMDKK----DIAYRVIADHSRTLT 296
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
V+L DN+ P K +R ++R AL K G L+ L + +Y Q
Sbjct: 297 VSLMDNVMPSNDGKGYTIRKILRRALGFQYLHLKKSPG-LLPLLVEQVFNEFSQIYQTEQ 355
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+Q++ EE++ L K G+ L + L
Sbjct: 356 PLDAIVQVVREEEAQFTKTLGK-----------------------------GLSILMEML 386
Query: 429 A---RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
A + + G AF LYD YG ++ +A + + + F++ K SK
Sbjct: 387 ADAKKAGGRRILPGSSAFVLYDRYGFPIDLTMAVAEQEGVAVDSAGFKEAQAAAKALSKN 446
Query: 486 KAASN------VPDIDLMDL-KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
++ V D+D +D ++ T DKYKY P L + +
Sbjct: 447 NQKTSEGLHLTVHDLDALDRNQNKQPTVDKYKYSNE----------PILASAV------- 489
Query: 539 QVFCIDKHAIRHARSGASID-SIQLEHNA----WVGLIFDKTNLYATAGGQIDDIGVAYL 593
AI+H SG ID ++Q H G+I D+T+ Y+ +GGQ D G
Sbjct: 490 --------AIKH--SGEIIDFTVQSVHTHKSEDVCGIILDQTSFYSESGGQEGDKGTILF 539
Query: 594 TNTTQENGKVEIGELASLEGKIVH------------------FGNVVSSFKVTPGLTSR- 634
T T + I +L+ L + H +G V G T++
Sbjct: 540 TEPTDSDSADIIKKLSQLSIRTAHTQKGAGVHGVFTVQDTKKYGRYVMHMGRLEGSTTQN 599
Query: 635 ----VEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQ---KSCRVFSDECALDFSV-YG 686
V+ + R RL RAHT +HLLN AL +VL T K C E L F YG
Sbjct: 600 AVCMVDTERRERLA--RAHTATHLLNYALSQVLRKTGADEIKQCGSLVSEDLLRFDFHYG 657
Query: 687 ETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISD 746
L+ V+AVE IN+++ + V M +E + + + E YP+ V ++ + +
Sbjct: 658 SPLTKAEVSAVEGIINEIVEGKEGVSVEFMPYAEAIKIKGIRHMKDEEYPETVRVVSVRN 717
Query: 747 KEN--------VISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
+ + S E C GTHV NTG I +IG S + GVR I L + + +A
Sbjct: 718 TSSKSTRTSTPITSAELCGGTHVINTGDIRRVRIIGESSISRGVRRISALCSEKAISA 775
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 68/103 (66%), Gaps = 6/103 (5%)
Query: 822 DDSIAFVNSGMCQFKNVFLGL--TPAPYP---RVANSQKCIRVGGKHNDLSFAGRDSYHH 876
D ++ F NSGM QFK FL L T PY R N QKCIR GGKHNDL G+D+YHH
Sbjct: 32 DPTLLFTNSGMVQFKKKFLDLAITGTPYGELRRACNYQKCIRAGGKHNDLDDVGKDTYHH 91
Query: 877 TFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
TFFEMLGNWSF DY+K++A FLT+ + L DR+Y ++
Sbjct: 92 TFFEMLGNWSFGDYFKKEAIHFGWVFLTE-VLRLDKDRIYVSY 133
>gi|194223559|ref|XP_001497842.2| PREDICTED: alanyl-tRNA synthetase, mitochondrial [Equus caballus]
Length = 962
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 262/808 (32%), Positives = 386/808 (47%), Gaps = 99/808 (12%)
Query: 21 FLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANS 75
FL +F + GH LV S+ + P GD S+ FVN+GM QFK +FLG + P A + RVANS
Sbjct: 42 FLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 101
Query: 76 QKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPL 134
QKCVR GG+H+DL GRD HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P
Sbjct: 102 QKCVRAGGRHSDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPE 160
Query: 135 DRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEI 194
+RL+ +YF G + GL D E+RDIWL LGVP + G + NFWEMG TGPCG +EI
Sbjct: 161 ERLWVSYFSGDPKVGLDPDLESRDIWLRLGVPASRVLSFGPQENFWEMGDTGPCGPCTEI 220
Query: 195 HYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVT 254
HYD+ G +L+E+WN+VF+ H R + ++ PL + ++DTG+G ERLV
Sbjct: 221 HYDLAG---------GVGTPELVELWNLVFMQHNREADGSLQPLPQRHVDTGMGLERLVA 271
Query: 255 ILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVAL 314
+LQ + STYDTDLF PLL I +VS L ++ D +
Sbjct: 272 VLQGRRSTYDTDLFSPLLSAIHQVS----------------LPIRFQKPLDLRVTGAPGV 315
Query: 315 ADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKI 374
+ LR ++R A+ S +V + G + L + E LGD YPE+Q + +I
Sbjct: 316 CIWALSPSRLVLRRILRRAVRFSSEVLRAPPG-FLGSLVPVVVETLGDAYPELQKNSAQI 374
Query: 375 QLILGEESRIFDNLRKAAVKEWKPLV-KTQPELEQFNIMEEPGLVLGVKYLTKQLARDPS 433
++ E+ F A+++ + ++ +T L ++ P V L+ L
Sbjct: 375 ASLVSEDEAAF----LASLQRGRRIIDRTVRRLGPSHVF--PAEVAWSLSLSGNLGLPLD 428
Query: 434 ITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPD 493
+ E+ + D+ GL++ L E +++ + + + +V
Sbjct: 429 LVELMLEEKGVQLDSAGLAQ-------------LAQEEAQRRAQQAEPIQEQGLQLDVHA 475
Query: 494 IDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARS 553
+ + + P TDD KY Y Y F + ++ Q++ D A+
Sbjct: 476 LGELQRRGVPPTDDSPKYSYSLQPGGG-YEFGTCEAQVL------QLYTEDGRAV----- 523
Query: 554 GASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEG 613
AS+ Q GL+ D+TN YA GGQ D G YL Q++ + G
Sbjct: 524 -ASVGEGQR-----CGLLLDRTNFYAEQGGQASDRG--YLVRVEQQDVLFPVARAQVCGG 575
Query: 614 KIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCR 672
I+H KV G ++ VD RLGCM HT HLLN ALR+ L T Q+
Sbjct: 576 FILHEAVAPECLKV--GDQVQLHVDKAWRLGCMEKHTAIHLLNWALRQALGPGTEQRGSH 633
Query: 673 VFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPG 732
+ + LD + L+ + + AVE + + + V +M L H +PG
Sbjct: 634 LNPEHLRLDVATQA-PLTPEQLQAVEGIVQEAVGQDEAV---YMEEVALACTAH---VPG 686
Query: 733 -----EIYPDDV-----------ILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
EIYPD V L S S E CCGTH+ TG + ++G +
Sbjct: 687 LRSLDEIYPDPVRVVSVGVPVAHALDPASQAALQTSVELCCGTHLLRTGAVGDLVIVGER 746
Query: 777 SYNHGVRSIKCLTGDSSKAAVENGKHLS 804
G + +TG+ ++ A E G+ L+
Sbjct: 747 QLTKGTTRLLAITGEQAQQAREVGQSLA 774
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 76/107 (71%), Gaps = 7/107 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK +FLG + P A + RVANSQKC+R GG+H+DL GRD
Sbjct: 62 PRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHSDLEDVGRDL 121
Query: 874 YHHTFFEMLGNWSF-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNW+F +Y+K +AC MA E LT+ +P +RL+ ++
Sbjct: 122 SHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ-VYGIPEERLWVSY 167
>gi|374375420|ref|ZP_09633078.1| alanyl-tRNA synthetase [Niabella soli DSM 19437]
gi|373232260|gb|EHP52055.1| alanyl-tRNA synthetase [Niabella soli DSM 19437]
Length = 874
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 261/790 (33%), Positives = 390/790 (49%), Gaps = 94/790 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR +FLD+F ++GH +V S+PIV D ++ F N+GM QFK+ FLG +PYPR
Sbjct: 2 MTSTEIRQAFLDFF-KSKGHEIVPSAPIVVKNDPTLMFTNAGMNQFKDYFLGNKQSPYPR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A + E LT+ +
Sbjct: 61 VADTQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIAWSWELLTE-VLK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P DRLY + F G ++ GLP DEE + W + + D I K K NFWEMG TGPCG
Sbjct: 120 IPKDRLYVSVFEGDEKEGLPFDEEAANEWKKW-ISEDRIIKGKKKDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D + + A VNAD +IEIWN VF+ R+ ++ PL ++DTG+
Sbjct: 179 SEIHVDCRPDAERAQVEGKTLVNADHPQVIEIWNNVFMQFNRLKDGSLQPLPAKHVDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV +LQNKTS YDTD+F + IEK++G K F+ S ++R+L+D+
Sbjct: 239 GFERLVRVLQNKTSNYDTDVFTGTISAIEKITGKK---YDFSDSKEA---IAFRVLADHI 292
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I +AD P T +R ++R A+ K L+ +L IAE V+
Sbjct: 293 RAIAFTIADGQLPSNTGAGYVIRRILRRAVRYYYSYLDYKH-PLLHQLVPVIAEQFATVF 351
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
E++ + ++ EE F + +K ++K
Sbjct: 352 SELKQQQEFVVKVIREEEDSFLRTLEKGLKRIDDILKAS--------------------- 390
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
S +I+G AF LYDTYG ++ + +A+ ++ FE ++ + K RS+
Sbjct: 391 --------SGNQIAGKDAFELYDTYGFPIDLTRLIASENNTSVDEAGFEAEMQQQKNRSR 442
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
A A ID D + PV H + SK +G + +
Sbjct: 443 AATA-----IDTEDWQ--PV---------HAEQPSK--------------FVGYEDLNVP 472
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
I++ + ++ + L+ + T YA +GGQ+ D G T + ++N ++
Sbjct: 473 TQIIKYRK-------VKAKGKEQYQLVLETTPFYAESGGQVGDTGTLTTTQSGEKN--IK 523
Query: 605 IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT 664
+ + I+H + + + G S V VD RL HT +HLL+AAL++VL
Sbjct: 524 VLDTKKENDLIIHLVDQLP--EPIDGGYSAV-VDFEKRLNTTYNHTATHLLHAALKQVLG 580
Query: 665 C-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPF 723
QK V + D S + + ++ + + VE +N I + V + M E
Sbjct: 581 PHVNQKGSLVSPELLRFDVSHFAK-ITDEELRKVEMIVNQKIRENIPVVIKEMPKEEALK 639
Query: 724 LTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVR 783
L + + GE Y D V ++ I K S E C GTHV TG I + + GVR
Sbjct: 640 LGAMALF-GEKYGDTVRVVTIDPK---FSVELCGGTHVPQTGMIGMFLITSEAAVAAGVR 695
Query: 784 SIKCLTGDSS 793
I+ LTG ++
Sbjct: 696 RIEALTGPAA 705
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ FLG +PYPRVA++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDYFLGNKQSPYPRVADTQKCLRVSGKHNDLEEVGVDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A + E LT+ + +P DRLY +
Sbjct: 93 LGNWSFGDYFKKEAIAWSWELLTE-VLKIPKDRLYVS 128
>gi|332877658|ref|ZP_08445401.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684407|gb|EGJ57261.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 878
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 253/811 (31%), Positives = 389/811 (47%), Gaps = 115/811 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FL +F ++GHT+V S+P+V D ++ F N+GM QFK FLG R
Sbjct: 1 MTSQEIRQQFLKFF-ESKGHTIVPSAPMVIKNDPTLMFTNAGMNQFKEFFLGNAKPKQTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V ++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 VVDTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F GS++ G+P D+E DIW E + DHI K NFWEMG GPCG
Sbjct: 119 IPKEHLYVTVFEGSEEEGVPFDQEAYDIWKER-IAEDHILLGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
+EIH D++ + A VN D +IEIWN VF+ R + ++ L +DTG+
Sbjct: 178 TEIHVDIRSDEEKAKIAGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPSKNVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ K S YDTD+F PL++ +E+++ +K Y + ++ + ++ + R++SD+
Sbjct: 238 GFERLCMVLQKKQSNYDTDVFTPLIQKVEEITKSKYYSGSNVSAEQEQINIAIRVISDHI 297
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + A+AD P + + + + F ++ + +L + + +G +P
Sbjct: 298 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLTKQMGSTFP 357
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ I ++ EE F +E+ L+L V
Sbjct: 358 ELEKQAFIIMNVIKEEENSF-----------------------LRTLEQGLLMLDV---- 390
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ ++ + ++SG AF LYDTYG K++ + + K LTL FE+ L + KERS+A
Sbjct: 391 --MIQNTTNKQLSGSKAFELYDTYGFPKDLTALILSEKGLTLDEAGFEENLQKQKERSRA 448
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A D ++ DD+ + YDT L +V
Sbjct: 449 AAQVKAGDWVVL-------RDDEEEEFIGYDT-------------LEAVV---------- 478
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
+++ + + D + L+F+ T YA GGQ+ D G + Y+ +T
Sbjct: 479 RLVKYRKVESQKDGTHYQ------LVFNTTPFYAEGGGQVGDKGTLQSANGELVYILDTK 532
Query: 598 QENGKVEIGELASLEGKIVHFG-----NVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+EN I+H N+ FK SR +A H+ +
Sbjct: 533 KEN------------NLIIHIAEHLPENLTDPFKAEVHPLSRQLAEAN--------HSAT 572
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL+ ALR VL T QK RV + DFS + + ++ + + VE+ +N I ++ +
Sbjct: 573 HLLHQALREVLGTHVEQKGSRVSPETLRFDFSHFAK-MTDEELREVERIVNRRIWEKIPL 631
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
+ + GE Y D V +I D SRE C GTHV NTG I
Sbjct: 632 QEHRNIPIQQAIEAGAMALFGEKYGDHVRMIQFGD-----SRELCGGTHVKNTGDIWFFK 686
Query: 772 VIGYKSYNHGVRSIKCLT-GDSSKAAVENGK 801
++ + G+R I+ +T G + K E K
Sbjct: 687 ILSEGAVAAGIRRIEAITSGGAMKYFAEQEK 717
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG RV ++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEFFLGNAKPKQTRVVDTQKCLRVSGKHNDLEEVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGDYFKKEAISWAWELLTE-VYKIPKEHLYVT 127
>gi|213963758|ref|ZP_03392008.1| alanyl-tRNA synthetase [Capnocytophaga sputigena Capno]
gi|213953638|gb|EEB64970.1| alanyl-tRNA synthetase [Capnocytophaga sputigena Capno]
Length = 877
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 256/794 (32%), Positives = 386/794 (48%), Gaps = 106/794 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR+ FL +F ++GHT+V S+P+V D ++ F N+GM QFK FLG + R
Sbjct: 1 MTSQEIRNLFLKFF-ESKGHTIVPSAPMVIKNDPTLMFTNAGMNQFKEFFLGHAKPKHKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+KR+A A E LT+
Sbjct: 60 VADTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKREAISWAWELLTE-IYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F GS++ G+P D+E DIW E + DHI K NFWEMG GPCG
Sbjct: 119 IPKENLYVTVFEGSEEDGVPFDQEAFDIWKER-IAEDHILLGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
+EIH D++ + A VN D +IEIWN VF+ R + ++ L +DTG+
Sbjct: 178 TEIHVDIRSDEEKAKVAGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPSRNVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQNK S YDTD+F PL+ +E+++ + T + ++ + R++SD+
Sbjct: 238 GFERLCMVLQNKQSNYDTDVFTPLIHKVEEITKSHYNSNGRVTPEQEQVNIAIRVISDHI 297
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + A+AD P + + + + F ++ + +L +A +G +P
Sbjct: 298 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLAAQMGATFP 357
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ I ++ EE F +E+ L+L V
Sbjct: 358 ELEKQQFLIMSVIKEEEASF-----------------------LRTLEQGLLMLDV---- 390
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ ++ ++SG AF LYDTYG K++ + + K LT+ E FE +L + KERS
Sbjct: 391 --MIQNSPDKQLSGGKAFELYDTYGFPKDLTALILSEKGLTMDEEGFEVQLQKQKERS-- 446
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
+AA+ V D + L+ DD + YDT L +V
Sbjct: 447 RAAAQVKTDDWVVLR-----DDDEEEFIGYDT-------------LEAVV---------- 478
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
+++ R + D + L+F+ T Y GGQ+ D G + Y+ +T
Sbjct: 479 RLVKYRRVESQKDGTHFQ------LVFNTTPFYPEGGGQVGDKGTLQAANGELIYILDTK 532
Query: 598 QENGK-VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+EN + I E E + FK L +R +A H+ +HLL+
Sbjct: 533 KENNLIIHIAEHLPTE--------LNDPFKAEVHLVAREMAEAN--------HSATHLLH 576
Query: 657 AALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
ALR VL T QK RV + DFS + + L+ D + VE+ +N I ++ +
Sbjct: 577 QALREVLGTHVEQKGSRVAPEALRFDFSHFAK-LTSDELKEVERLVNKRIFEKIPLQEHR 635
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ + + GE Y D V +I D S+E C GTHV NTG I +I
Sbjct: 636 NIPIQQAVESGAMALFGEKYGDRVRMIQFGD-----SKELCGGTHVKNTGDIWFFKIISE 690
Query: 776 KSYNHGVRSIKCLT 789
+ G+R I+ +T
Sbjct: 691 GAVAAGIRRIEAIT 704
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG + RVA++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEFFLGHAKPKHKRVADTQKCLRVSGKHNDLEEVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+KR+A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGDYFKREAISWAWELLTE-IYKIPKENLYVT 127
>gi|302923886|ref|XP_003053770.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734711|gb|EEU48057.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 956
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 258/822 (31%), Positives = 402/822 (48%), Gaps = 78/822 (9%)
Query: 7 SSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP 66
S ++ + +R +FL+YF +GHT+V SS +VP+ D ++ F N+GM QFK +FLG
Sbjct: 3 ESELKWPAARVRQTFLEYF-EQRGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTIG 61
Query: 67 APYPRVA-----NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMA 121
P +SQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + +
Sbjct: 62 KTDPMAGLKAAVDSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAVQYS 121
Query: 122 LEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWE 181
E LTK L RLY TYF G ++ L D E +D+WL +GVP DHI MK NFWE
Sbjct: 122 WELLTKV-YGLDPARLYVTYFEGDEKLKLEPDLEAKDLWLSVGVPEDHILPGNMKDNFWE 180
Query: 182 MGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
MG GPCG SEIHYD G ++A VN D ++EIWN VF+ + R ++ L
Sbjct: 181 MGDQGPCGPCSEIHYDKIGGRNAA-NLVNMDDPMVVEIWNNVFMQYDRQKDGSLKSLPAK 239
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
+IDTG+G+ERLV+ LQN S Y TD F PL + IE+V+GA+PY + + +DT+YR
Sbjct: 240 HIDTGMGYERLVSALQNTVSNYATDCFTPLFKKIEEVTGARPYSDKYGKDDADGIDTAYR 299
Query: 302 MLSDYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAE 358
+++D+ R ++ ++AD P+ +R V+R + + F G ++ + +
Sbjct: 300 VVADHIRTLSFSIADGAVPNNDGRGYVVRRVLRRGVRYARKYFNADIGAFFSKILPALVD 359
Query: 359 ILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
+G+ +PE+ I+ IL EE F + L + + + E++
Sbjct: 360 QMGEQFPELVKKQQDIKEILDEEEVAFA----------RTLDRGEAQFEKY--------- 400
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
Q +D S ++ GD+ + LYDT+G ++ + +A + L + E +
Sbjct: 401 ------AAQAVKDGS-KKLEGDVVWRLYDTFGFPVDLTRLMAEERSLEIDDAEVEAARIK 453
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
+E SKA S V +++ + + K + TN V ++
Sbjct: 454 AREASKAVKES-VQTFSKLNVHQIAELEQQLKVER---TNDDAKFLQGDSKGKVQLIYDG 509
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
+ F I + +GL+ D TN YA +GGQ+ D G + + +
Sbjct: 510 KTFLKSTKDIPEKTA--------------LGLLLDNTNFYAESGGQVADTGRIVIDDVAE 555
Query: 599 ENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
N + ++ + G I+H G + + G E D R HT +H+LN +
Sbjct: 556 FN----VLDVQNFGGYILHSG-YIEYGALNSGDEVICEYDELRRSPIRNNHTGTHILNHS 610
Query: 659 LRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
LR VL +QK V +++ DFS + + ++ + +E N+ I + + +
Sbjct: 611 LREVLGDEIHQKGSLVDNEKLRFDFS-HKTGVKIEELKKIEDRSNEYIRRGSPIFSKDVD 669
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDI--------SDKENVISR----EPCCGTHVFNTG 765
+ + GE YP+ V ++ I +D +NV R E C GTHV TG
Sbjct: 670 LDLARQIEGCRAVFGETYPNPVRVVSIGKDIDEMLADPKNVEWRQYSVEFCGGTHVEQTG 729
Query: 766 HIESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHL 803
I+ +I G+R I TG+++ + A E K L
Sbjct: 730 LIKDLILIEESGIAKGIRRIIAYTGEAAHQVQREAAEFAKKL 771
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA-----NSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK +FLG P +SQKCIR GGKHNDL G+D
Sbjct: 35 VPHNDPTLLFTNAGMNQFKPIFLGTIGKTDPMAGLKAAVDSQKCIRAGGKHNDLDDVGKD 94
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + + E LTK L RLY T+
Sbjct: 95 SYHHTFFEMLGNWSFGDYFKKEAVQYSWELLTK-VYGLDPARLYVTY 140
>gi|119356090|ref|YP_910734.1| alanyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
gi|205830021|sp|A1BD33.1|SYA_CHLPD RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|119353439|gb|ABL64310.1| alanyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
Length = 888
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 270/810 (33%), Positives = 400/810 (49%), Gaps = 126/810 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR SFLD+F + +GHT+V+S+P++P D ++ F N+GM QFK+VFL PY R
Sbjct: 1 MNSREIRQSFLDFF-DRKGHTIVRSAPVIPLDDPTLLFTNAGMNQFKDVFLDKGTRPYVR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A++QKC+R GKHNDL GRD+YHHTFFEMLGNWSF DYYK++A A E LT
Sbjct: 60 AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKKEAISWAWELLT-SVWH 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RLY T + DEE+ +W E +P DHI K K NFWEMG TGPCG
Sbjct: 119 LPKERLYATVY--------YDDEESYLLWQEETDIPHDHIIKFDEKDNFWEMGETGPCGP 170
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIH D+ E S VNA +IE+WN+VFI + R + + PL + ++DTG+GFE
Sbjct: 171 CSEIHIDLT-EDGSGKPLVNAGDYRVIELWNLVFIQYNRQADGRLEPLPQKHVDTGMGFE 229
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ ++Q K S YDTD+F PL + I +++G ++ S D + R+L+D++R +
Sbjct: 230 RVCAVMQGKASNYDTDVFRPLFDRITEITGV-----SYNASLDDPSDIAMRVLADHARTL 284
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVKQG---KLVKELSYNIAEILGDVYPEI 367
T AL D P + + R V +L + G L+ L +A +GDV+PE+
Sbjct: 285 TFALTDGAMP--SNEGRGYVLRRILRRALRYSKTLGCSEPLLYRLVETLAASMGDVFPEL 342
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ + I+ E F L +E FN L+ V
Sbjct: 343 RKQQQAVSRIIRAEEESF-------------LATLDRGIEIFN-----ELIAAV------ 378
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
R T +SGD AF LYDT+G ++ + +AA + E F++ + E K R++
Sbjct: 379 --RSRGTTVVSGDDAFRLYDTFGFPLDLTRLMAAEAGFEVDEEGFDRCMKEQKTRARQ-- 434
Query: 488 ASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHA 547
D D +H + ++ + + + S + L+ L I
Sbjct: 435 -------DRRDKQHLKGDEGEWTW-FSAERTSVFTGYHSLE-ELASI------------- 472
Query: 548 IRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG----VAY--LTNTTQENG 601
+G SI S +L ++ D+T YA +GGQ D G AY + T+++G
Sbjct: 473 -----TGVSIFSDRLL------VVLDRTPFYAESGGQCGDRGWIETAAYRLRVSDTRKDG 521
Query: 602 KVEIGELASLEGKIVHF----GNVVSSFKVTPG--------LTSRVEVDARMRLGCMRAH 649
+ IVH + VS ++P L R VD R G R H
Sbjct: 522 DM-----------IVHLVTEVRDSVSDGAISPADLSFDEGKLACRASVDRSDRQGTERNH 570
Query: 650 TTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +HLL+AALRR L QK V S+ DFS + L+ + +A VE +N+ I +
Sbjct: 571 TATHLLHAALRRTLGQHVQQKGSFVSSERLRFDFSHFAR-LTSEELAIVESEVNEQIRSA 629
Query: 709 VQVDRRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNT 764
V ++ ++P+ + G+ Y D V +++I+ +S E C GTHV +
Sbjct: 630 EPV----VKHQDIPYDEAIARGALAFFGDKYADRVRVVEIAG----LSVELCGGTHVDSI 681
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSSK 794
G I ++ S GVR I+ LTG +++
Sbjct: 682 GQIGLFKIVSESSVASGVRRIEALTGKAAE 711
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFL PY R A++QKCIR GKHNDL GRD+YHHT
Sbjct: 28 IPLDDPTLLFTNAGMNQFKDVFLDKGTRPYVRAADTQKCIRASGKHNDLEDVGRDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK++A A E LT LP +RLY T
Sbjct: 88 FFEMLGNWSFGDYYKKEAISWAWELLT-SVWHLPKERLYAT 127
>gi|347830916|emb|CCD46613.1| similar to alanyl-tRNA synthetase [Botryotinia fuckeliana]
Length = 961
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 268/822 (32%), Positives = 402/822 (48%), Gaps = 94/822 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R FL +F H++V SS +VP+ D ++ F N+GM QFK +FLG A R
Sbjct: 15 VRKQFLSFF-EKNAHSVVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTVGKTDDMAQLKR 73
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
++QKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K DA MA E LTK
Sbjct: 74 AVDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKADAIGMAWELLTKV-YG 132
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYF G + +P D E +++WL+ GV DHI MK NFWEMG TGPCG
Sbjct: 133 LDSDRLYVTYFEGDAENNVPADTEAKNLWLKAGVKEDHILTGNMKDNFWEMGETGPCGPC 192
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIHYD G +A VN D +++EIWNIVFI R ++ L +IDTG+G+ER
Sbjct: 193 SEIHYDRIGGGRNAAHLVNQDDPNVLEIWNIVFIQFDRQKDRSLKTLPAKHIDTGMGYER 252
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV++LQ+K+S YDTD+F PL I++V+ A+PY + + +DT+YR+++D+ R++T
Sbjct: 253 LVSVLQDKSSNYDTDVFSPLFAKIQEVTNARPYTDKYGKDDTDGIDTAYRVVADHIRLLT 312
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A++D P+ + +R V+R + F + G ++ + E +G+ +PEI
Sbjct: 313 FAISDGGVPNNEGRGYVVRRVLRRGSRYARKYFNAEIGSFFSKILPALVEQMGEQFPEIV 372
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
++ IL EE F L++ M E +K TK+L
Sbjct: 373 KKQQDVKEILDEEEEAFART-----------------LDRGEKMFEKYAAQAIKTNTKKL 415
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKL-------TLCHEAFEQKLNELKE 481
SG + LYDT+G +++ + +A + L + E + +KE
Sbjct: 416 ---------SGADVWRLYDTFGFPEDLTKIMAEERGLETDEGEIEIAKEKAREASKSVKE 466
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
+ A +V I +D P +D K+ SK + T + ++ + F
Sbjct: 467 AAHTFAKLDVHQIAELDNMGIPRPNDDAKF-------SKGDS-----TGKIQLIYDGKNF 514
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
+S A L ++ G++ DKTN YA GGQ+ D G + +
Sbjct: 515 L---------KSTAD-----LPNDKPFGILLDKTNFYAEQGGQVFDTGKIIIDGVAE--- 557
Query: 602 KVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
++ + + G IVH G + FK G E D R HT +H+LN ALR
Sbjct: 558 -FKVLDTQAYGGYIVHNGYMDYGDFKA--GDEVICEYDELRRQPIRNNHTGTHILNHALR 614
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
L QK V ++ DFS + +++ + VE N I ++ + +
Sbjct: 615 EHLGEDINQKGSLVDQEKLRFDFS-HKAQVTLPELKKVEDSANSYIKQNCKIYSKDVDLD 673
Query: 720 ELPFLTHLTVIPGEIYPD-----------DVILIDISDKE-NVISREPCCGTHVFNTGHI 767
+ + + GE YP+ DV+L + + E +S E C GTHV TG I
Sbjct: 674 IAKGIEGVRAVFGETYPNPVRVVSVGVEVDVLLAEPKNPEWRKVSVEFCGGTHVDQTGII 733
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHLST 805
+ ++ G+R I TGD++ + A+E GK ++
Sbjct: 734 KDLVIVEESGIAKGIRRIIAYTGDAAHEVQRIAMEFGKRIAA 775
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 69/105 (65%), Gaps = 6/105 (5%)
Query: 820 YGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDSY 874
+ D ++ F N+GM QFK +FLG A R ++QKCIR GGKHNDL G+DSY
Sbjct: 39 HNDPTLLFTNAGMNQFKPIFLGTVGKTDDMAQLKRAVDTQKCIRAGGKHNDLDDVGKDSY 98
Query: 875 HHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNWSF DY+K DA MA E LTK L DRLY T+
Sbjct: 99 HHTFFEMLGNWSFGDYFKADAIGMAWELLTK-VYGLDSDRLYVTY 142
>gi|294932634|ref|XP_002780365.1| cytosolic tRNA-Ala synthetase, putative [Perkinsus marinus ATCC
50983]
gi|239890298|gb|EER12160.1| cytosolic tRNA-Ala synthetase, putative [Perkinsus marinus ATCC
50983]
Length = 982
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 256/819 (31%), Positives = 405/819 (49%), Gaps = 100/819 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----R 71
+R +F+++F +G T +KSSP+VP+ D ++ F+N+GM QFK +FLG +P R
Sbjct: 30 VRDTFINFFVEKKGATFLKSSPVVPHNDPTLLFINAGMNQFKPIFLGQLDKDHPFYGVKR 89
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
N+QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF D++K + A E LT+
Sbjct: 90 ATNTQKCIRAGGKHNDLEDVGKDTYHHTFFEMLGNWSFGDFFKAEQIPWAWELLTE-VFG 148
Query: 132 LPLDRLYFTYFGGS-DQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
L RLY TY+GG + +P D+E RD+WL+ +P DH+ GMK NFWEMG TGPCG
Sbjct: 149 LDPARLYATYYGGDPKEPEVPADDEARDLWLKF-LPPDHVIPFGMKENFWEMGDTGPCGP 207
Query: 191 SSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
SEIHYD + G +SAL VN D +IEIWN+VF+ + R + ++ L +DTG+GF
Sbjct: 208 CSEIHYDNVGGRDASAL--VNMDDPTVIEIWNLVFMQYNRENDGSLTRLPHPCVDTGMGF 265
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ER+ L KTS YDTD+F P+ I++ P R++T ++D YR+++D+ R
Sbjct: 266 ERICAALTGKTSNYDTDVFKPIFAAIQE---QIPGLRSYTGELTDNIDVGYRVVADHIRT 322
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
+TVAL+D P + LR ++R A+ + G +L + E LG+ +PE
Sbjct: 323 LTVALSDGAVPSNEGRGYVLRRILRRAVRYGTEKLNAPAG-FFNKLVPAVVESLGEAFPE 381
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLV-KTQPELEQFNIMEEPGLVLGVKYLT 425
I + +Q ++ +E F + ++E+ KT+ ++
Sbjct: 382 IVANQADVQALIADEEEQFARTLERGIREFNSRASKTEGKV------------------- 422
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+SG AF L+ T+G ++ Q +A + +T+ ++FE++ +++SK
Sbjct: 423 -----------LSGRDAFELFTTFGFPCDLTQVMAQERGMTVDVQSFEEEFEAFRQKSKE 471
Query: 486 K----AASNVPDID-----LMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
SN+ L + P TD+ KY + +S + + L I
Sbjct: 472 SNNFTMGSNLQLFADQTNYLENELKVPKTDETCKYAW----DSAKGEGGQWSSQLCAIWD 527
Query: 537 GDQVF-CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
G + ID +SG + +I GL+ T YA GGQI D+G
Sbjct: 528 GKKWLDTID------VKSGYAQKTI--------GLVLSVTPFYAEQGGQIFDVGTIVDPL 573
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSF--KVTPGLTSRVEVDARMRLGCMRAHTTSH 653
T + ++ ++H G++ S+ + G R VD + R + HT +H
Sbjct: 574 T---GARFDVKNTQKFGQYVLHIGSMDSAVDAALKVGSEVRASVDYQRRALIAKNHTATH 630
Query: 654 LLNAALRRVL--TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
+LN ALR+VL C Q+ V DF+ + ++ + + +E+ N I + V
Sbjct: 631 ILNFALRQVLGDKCD-QRGSLVDPSRLRFDFA-QNKPITNEQLKEIEQICNQQIQKHLNV 688
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP------------CCGT 759
++ ++ + L + GE YPD V ++ + + + + +E C GT
Sbjct: 689 FANDVQLAKAKDIRGLRAVFGETYPDPVRVVSVGEAIDTLLKETEVDFGHEFSIEFCGGT 748
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
HV N+ I + + G+R I TG +AAVE
Sbjct: 749 HVGNSQEIFKFVITAEEGIAKGIRRIVAATG--PQAAVE 785
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F+N+GM QFK +FLG +P R N+QKCIR GGKHNDL G+D
Sbjct: 53 VPHNDPTLLFINAGMNQFKPIFLGQLDKDHPFYGVKRATNTQKCIRAGGKHNDLEDVGKD 112
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF D++K + A E LT+ L RLY T+
Sbjct: 113 TYHHTFFEMLGNWSFGDFFKAEQIPWAWELLTE-VFGLDPARLYATY 158
>gi|429750019|ref|ZP_19283087.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429166155|gb|EKY08161.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 879
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 253/811 (31%), Positives = 391/811 (48%), Gaps = 115/811 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FL +F ++GHT+V S+P+V D ++ F N+GM QFK FLG + R
Sbjct: 1 MTSQEIRQQFLKFF-ESKGHTIVPSAPMVIKNDPTLMFTNAGMNQFKEFFLGNAKPKHTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V ++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 VVDTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F GS++ G+P D+E DIW E + DHI K NFWEMG GPCG
Sbjct: 119 IPKEHLYVTVFEGSEEEGVPFDQEAYDIWKER-IAEDHILLGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
+EIH D++ + A VN D +IEIWN VF+ R + ++ L +DTG+
Sbjct: 178 TEIHVDIRSDEEKAKIAGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPSKNVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ K S YDTD+F PL++ +E+++ +K Y + ++ + ++ + R++SD+
Sbjct: 238 GFERLCMVLQKKQSNYDTDVFTPLIQKVEEITKSKYYTGSNVSTEQEQINIAIRVISDHI 297
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + A+AD P + + + + F ++ + +L + + +G +P
Sbjct: 298 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLVKQMGGTFP 357
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ I ++ EE F +E+ L+L V
Sbjct: 358 ELEKQAFIIMSVIKEEENSF-----------------------LRTLEQGLLMLDV---- 390
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ ++ + ++SG AF LYDTYG K++ + + K LTL FE+ L + KERS+A
Sbjct: 391 --MIQNATNKQLSGVKAFELYDTYGFPKDLTALILSEKGLTLDEAGFEENLQKQKERSRA 448
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A D ++ +D+ + YDT L +V
Sbjct: 449 AAQVKAGDWVVL-------REDEEEEFIGYDT-------------LEAVV---------- 478
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
+++ + + D + L+F+ T YA GGQ+ D G + Y+ +T
Sbjct: 479 RLVKYRKVESQKDGTHYQ------LVFNTTPFYAEGGGQVGDKGTLQSANGELVYILDTK 532
Query: 598 QENGKVEIGELASLEGKIVHFG-----NVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+EN I+H N+ FK SR +A H+ +
Sbjct: 533 KEN------------NLIIHIAEHLPENLTDPFKAEVHPLSRQLAEAN--------HSAT 572
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL+ ALR VL T QK RV + DFS + + L+ + ++ VE+ +N I ++ +
Sbjct: 573 HLLHQALREVLGTHVEQKGSRVSPETLRFDFSHFAK-LTDEELSEVERIVNRRIWEKIPL 631
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
+ + GE Y D V +I D SRE C GTHV NTG I
Sbjct: 632 QEHRNIPIQQAIEAGAMALFGEKYGDHVRMIQFGD-----SRELCGGTHVKNTGDIWFFK 686
Query: 772 VIGYKSYNHGVRSIKCLT-GDSSKAAVENGK 801
++ + G+R I+ +T G + K E K
Sbjct: 687 ILSEGAVAAGIRRIEAITCGGAMKYFAEQEK 717
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG + RV ++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEFFLGNAKPKHTRVVDTQKCLRVSGKHNDLEEVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGDYFKKEAISWAWELLTE-VYKIPKEHLYVT 127
>gi|193213512|ref|YP_001999465.1| alanyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
gi|193086989|gb|ACF12265.1| alanyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
Length = 885
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 262/805 (32%), Positives = 397/805 (49%), Gaps = 115/805 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR SFLD+F + H +V+S+P++P D ++ F N+GM QFK+VFLG Y R
Sbjct: 1 MNSREIRQSFLDFFAAKE-HRIVRSAPVIPAEDPTLLFTNAGMNQFKDVFLGKGTREYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A++QKC+R GKHNDL GRD+YHHTFFEMLGNWSF DYYK++A A E +T
Sbjct: 60 AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKKEAIGWAWELMTD-VWK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RLY T + DEE+ +W E + HI K G K NFWEMG TGPCG
Sbjct: 119 LPKERLYATVY--------HDDEESFKLWQSETDIEHSHILKFGDKDNFWEMGETGPCGP 170
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIH D+ + S VN + +IE+WN+VFI + R + ++ PL + ++DTG+GFE
Sbjct: 171 CSEIHIDLTPDGSGG-PLVNVGDHRVIELWNLVFIQYDRQADGSLQPLPQKHVDTGMGFE 229
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +LQ K+S YD+D+F PL E I +++G + +T S + D + R+++D+ R +
Sbjct: 230 RVTAVLQGKSSNYDSDVFTPLFEKITELTGVR-----YTASLDSATDIAMRVIADHCRTL 284
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV--KELSYNIAEIL----G 361
T AL+D P + LR ++R A+ + G L + + Y + E+L G
Sbjct: 285 TFALSDGAMPGNEGRGYVLRRILRRAVRYA--------GTLGCHEPIMYKMVEVLVRTMG 336
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
DV+PE++ ++ I+ E F LV E FN +V G+
Sbjct: 337 DVFPELEKQQPTVEKIIRAEEESF-------------LVTLGRGTEIFN-----EVVAGM 378
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
K T ISG+ AF LYDT+G ++ + +AA + E FE + E K
Sbjct: 379 KT--------SGSTTISGEDAFKLYDTFGFPLDLTRLMAAEVGFGIDEEGFEHCMTEQKT 430
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
R++ D K K D ++ P T VG D +
Sbjct: 431 RAR--------------------MDRKDKMQVQDDGGEWQWFAPEAPTEFVGY---DTL- 466
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN------ 595
+ A++ +++ + + ++ D+T YA +GGQ+ D G +
Sbjct: 467 ----------ETSATLTAVKTGGDRLM-VVLDRTPFYAESGGQVGDHGTIETDDYRLDVT 515
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T+++G++ I + S K+ + ++ VD R+ R HT +HLL
Sbjct: 516 DTRKDGELVIHFVTSARDKVRDCAVSPADLSFEGAVSVEAAVDRDRRVATERNHTATHLL 575
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV--- 711
+AALR+VL QK V + DFS + + +S + + VE +N I V
Sbjct: 576 HAALRKVLGEHVQQKGSLVTPERLRFDFSHFSK-VSPEEMEQVEHEVNAQIRKAAGVTKH 634
Query: 712 -DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESC 770
D + A EL L G+ Y D V ++D+ IS E C GTHV N G I
Sbjct: 635 ADVPYEEALELGALAFF----GDKYADRVRVVDVPG----ISIELCGGTHVGNIGQIGMV 686
Query: 771 TVIGYKSYNHGVRSIKCLTGDSSKA 795
++ S G+R I+ +TG +++A
Sbjct: 687 KIVSESSVAAGIRRIEAVTGAAAEA 711
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG Y R A++QKCIR GKHNDL GRD+YHHT
Sbjct: 28 IPAEDPTLLFTNAGMNQFKDVFLGKGTREYTRAADTQKCIRASGKHNDLEDVGRDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK++A A E +T LP +RLY T
Sbjct: 88 FFEMLGNWSFGDYYKKEAIGWAWELMTD-VWKLPKERLYAT 127
>gi|409198079|ref|ZP_11226742.1| alanyl-tRNA ligase [Marinilabilia salmonicolor JCM 21150]
Length = 877
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 260/804 (32%), Positives = 395/804 (49%), Gaps = 116/804 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + +R F D+F + + H +V S+P+V D ++ F N+GM QFK++FLG PR
Sbjct: 1 MRASEVRQKFFDFFKSKE-HVIVPSAPMVVKNDPTLMFTNAGMNQFKDIFLGNREPAAPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A EFLT ++
Sbjct: 60 VADAQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIDWAWEFLT-GELN 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ +RLY T F G G+ DEE W + +P + I K NFWEMG +GPCG
Sbjct: 119 VDKERLYATVFEGDASDGVERDEEAAQCWQQY-LPEERILNGNKKDNFWEMGESGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E VN D ++IEIWN+VFI + R S+ + L + ++DTG+
Sbjct: 178 SEIHIDLRSEEERLKKGGHELVNKDHPEVIEIWNLVFIQYNRKSSGELTSLPQKHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ K+S YDTD+FLPL++ I ++ K YG + D D + R+++D+
Sbjct: 238 GFERLCRVLQKKSSNYDTDIFLPLIQQIASLTNVK-YGAS------NDGDVAMRVIADHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++AD P A +R ++R A+ + V++ L L I +++GD Y
Sbjct: 291 RTIAFSIADGQLPSNNKAGYVIRRILRRAVRYAYTFLNVRKPFLSGLLPVLI-DVMGDAY 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ IQ ++ EE F L+ A G+ L K +
Sbjct: 350 PELKSQKELIQKVIHEEEESF--LKTLAT----------------------GIALLDKII 385
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ L + + + G +AF LYDT+G ++ + + + K L + FE+++ ++S+
Sbjct: 386 AETLKGEYKV--VDGKVAFELYDTFGFPLDLTELILSEKGLVVNRREFEKEME--AQKSR 441
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYK----YDYH-YDTNSKRYTFPCLDTNLVGIVIGDQ 539
A+ AS V D + L+ DDK + YDYH + RY
Sbjct: 442 ARNASAVETGDWVVLR-----DDKEEEFVGYDYHETEVYITRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
+++++ L+F+ T YA +GGQ+ D G+ T E
Sbjct: 481 -------------------QVKVKNKEQYQLVFNITPFYAESGGQVGDSGI-----ITSE 516
Query: 600 NGKVEIGELASLEGKIVHF-----GNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
K+EI + I+H N ++FK T V V+ R R HT +HL
Sbjct: 517 EEKIEIIDTKKENDLIIHIAKKLPANQEAAFKAT------VNVEKRRR--AASNHTATHL 568
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
L+ ALR +L QK V D DF+ + + ++ + + VEK +N I +QV+
Sbjct: 569 LHKALRAMLGDHVEQKGSLVHPDYLRFDFAHF-QKVTPEEIRQVEKMVNAEIRANIQVEE 627
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
E + GE Y D V I D S E C GTHV TG I +I
Sbjct: 628 HREVPLEKAREMGAMALFGEKYGDVVRTIGFGD-----SVELCGGTHVHATGEIGFFRII 682
Query: 774 GYKSYNHGVRSIKCLTGDSSKAAV 797
S + G+R I+ ++ D ++ V
Sbjct: 683 SEGSVSAGIRRIEAVSADRAEELV 706
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++FLG PRVA++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDIFLGNREPAAPRVADAQKCLRVSGKHNDLEEVGHDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A EFLT +++ +RLY T
Sbjct: 92 LGNWSFGDYFKKEAIDWAWEFLT-GELNVDKERLYAT 127
>gi|313887310|ref|ZP_07821001.1| alanine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
gi|312923229|gb|EFR34047.1| alanine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
Length = 871
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 270/819 (32%), Positives = 405/819 (49%), Gaps = 105/819 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR +FLD+F GH +V S+P+V D ++ F N+GM QFK++ LG Y R
Sbjct: 1 MTAHDIRQAFLDFF-EEHGHRIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNKEPQYRR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A+SQKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+KR+A + A FLT+ +
Sbjct: 60 AADSQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKREAIKYAWTFLTE-RLQ 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY T FGGS + GL D+E WL+ D I K NFWEMG TGPCG
Sbjct: 119 LPKDRLYVTVFGGSPEEGLSRDDEAASYWLQY-TTEDRIIDGSRKDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E VN D +IEIWN+VF+ + R + PL IDTG+
Sbjct: 178 SEIHIDLRSEEERQAVCGRDLVNKDHPLVIEIWNLVFMQYDRKVDGHLEPLPHKVIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +Q K S YDTDLF PL+ IE +SG + YG+ +D + R+++D+
Sbjct: 238 GFERLCMAMQGKKSNYDTDLFTPLIRAIETLSGEQ-YGQN------EQVDIAMRVVADHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I A+AD P A +R ++R A+ + + L L + E++G+ Y
Sbjct: 291 RTIAFAIADGQLPSNAKAGYVIRRILRRAVRYAYTFLHADEPMLYTLLP-TLNEVMGEAY 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI I ++ EE F LR L G+K L
Sbjct: 350 PEIVAQRELIASVIKEEEESF--LRT--------------------------LAQGLKLL 381
Query: 425 TKQLARDPSITEI-SGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
++ P ++ SG AF LYDTYG ++ + + + + +TL AF++ + E K R+
Sbjct: 382 ESKIQELPQDAKVLSGADAFVLYDTYGFPLDLTELILSERGMTLDQVAFDKLMQEQKSRA 441
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+ AA + D +++ D + TF +G + I
Sbjct: 442 RQAAAIDAADWEVL------------------DEETTESTF-----------VGYETLQI 472
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
+ H +R+ + + + ++ ++ +T YA GGQI D GV Q+ +
Sbjct: 473 ETHILRYRK-------VADKKRSYYQVVLAETPFYAEMGGQIGDKGVL----IAQDGTEY 521
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
I + VH ++S+ P V +R HT +HL++ ALR VL
Sbjct: 522 PIIDTKRENNLPVH---ILSTLPANPKQPFIARVGDELRHLTEANHTATHLMHHALRAVL 578
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIANQVQVDRRHMRASEL 721
T QK V +D DFS + + ++ + +A VE+ +N ++ A++ + ++R++ ++
Sbjct: 579 GTHVEQKGSLVSADLLRFDFSHF-KKVTPEEIAEVERLVNAEIRADRPRDEQRNVPIAKA 637
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
+ + + GE Y D+V +I D S E C GTHV +TG I +I S G
Sbjct: 638 KEMGAMALF-GEKYGDEVRVIKYGD-----SVELCGGTHVASTGQIGFFKIISEGSIAAG 691
Query: 782 VRSIKCLTGDSSKAAVENGKHLSTAAS-FSQILNVGNIP 819
+R I+ +TG ++ V HL F++ LN N+P
Sbjct: 692 IRRIEAVTGPKAEEYVH---HLEEQLQLFNERLN--NVP 725
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG Y R A+SQKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDIILGNKEPQYRRAADSQKCLRVSGKHNDLEEVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+KR+A + A FLT+ + LP DRLY T
Sbjct: 92 LGNWSFGDYFKREAIKYAWTFLTE-RLQLPKDRLYVT 127
>gi|255532429|ref|YP_003092801.1| alanyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
gi|255345413|gb|ACU04739.1| alanyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
Length = 900
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 257/797 (32%), Positives = 398/797 (49%), Gaps = 75/797 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K IR ++L +F + Q H +V S+PIV D ++ F N+GM QFK++FLG P YPR
Sbjct: 1 MTAKEIRQAYLKFFESKQ-HHIVASAPIVVKNDPTLMFTNAGMNQFKDLFLGEAPIKYPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V ++Q+C+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A + E LT+
Sbjct: 60 VTDTQRCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAIAWSWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P D+LY + F G ++ GLP D E ++W + VP + I K NFWEMG TGPCG
Sbjct: 119 IPKDKLYVSIFEGDEKEGLPRDTEAYELWKQY-VPEERIILGNKKDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D + + L VNAD +IEIWN VF+ R+ ++ L ++DTG+
Sbjct: 178 SEIHVDCRPDDERKLVEGKTLVNADHPQVIEIWNNVFMQFNRLKDGSLQLLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV +LQ K+S YDTD+F PL++ I +G + YG T D + R+++D+
Sbjct: 238 GFERLVRVLQGKSSNYDTDVFQPLIQFIAAKAGIQ-YGMNEQT------DIAMRVMADHV 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I +AD P A +R ++R A+ + +K + EL +AE V+
Sbjct: 291 RAIAFVIADGQLPSNNKAGYVIRRILRRAVRYAYTFLNLKD-PFLNELVPVLAEQFKGVF 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
E+ + +Q ++ EE F ++ + K Q E +P +++
Sbjct: 350 EELALQQDFVQKVILEEEVSFLRTLATGIQRFDSYTKKQAEFLMSENAIDPEKSFEDQWV 409
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
L +D + ISG+ AF L DTYG ++ + +A K+ ++ E + + L + KERS+
Sbjct: 410 HSIL-KDQMV--ISGEFAFELNDTYGFPIDLTELMAREKRWSVDMEEYNKALLKQKERSR 466
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
A A + D L++ P L+ VG + +
Sbjct: 467 AATAVDTGDWVLVN--------------------------PDLEVEFVGYDDAEA----E 496
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK-- 602
I++ R A + ++ KT YA +GGQ+ D G +++ +
Sbjct: 497 TEIIKYRRVSA-------KGKEQYQIVLSKTPFYAESGGQVGDTG------RLEDHSRLF 543
Query: 603 -VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
VEI + G IVH+ + + + G V +D RL HT +HLL+AAL++
Sbjct: 544 FVEITDTKKENGVIVHYADTLP--EDIEGHFWAV-IDENKRLLSQDNHTATHLLHAALKK 600
Query: 662 VL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL + QK V D DFS + ++ + ++ +E +N I + + + +
Sbjct: 601 VLGSHVNQKGSLVNPDYLRFDFSHFAR-VTDEELSQIEHLVNQKIRENIPLKEQRYVPYD 659
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+ +T + GE Y D V +I D S+E C GTHV TG I +I +
Sbjct: 660 QAISSGVTALFGEKYGDLVRIITFDDH---YSKELCGGTHVQATGQIGYFKIIAESAVAA 716
Query: 781 GVRSIKCLTGDSSKAAV 797
GVR I+ +T D ++A V
Sbjct: 717 GVRRIEAITADKAEAFV 733
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++FLG P YPRV ++Q+C+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDLFLGEAPIKYPRVTDTQRCLRVSGKHNDLEEVGIDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A + E LT+ +P D+LY +
Sbjct: 92 LGNWSFGDYFKKEAIAWSWELLTE-VYKIPKDKLYVS 127
>gi|429751934|ref|ZP_19284823.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429178369|gb|EKY19648.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 877
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 253/793 (31%), Positives = 387/793 (48%), Gaps = 104/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR+ FL +F ++GHT+V S+P+V D ++ F N+GM QFK FLG + R
Sbjct: 1 MTSQEIRNLFLKFF-ESKGHTIVPSAPMVIKNDPTLMFTNAGMNQFKEFFLGHAKPKHKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+KR+A A E LT+
Sbjct: 60 VADTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKREAISWAWELLTE-IYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F GS++ G+P D+E DIW E + DHI K NFWEMG GPCG
Sbjct: 119 IPKENLYVTIFEGSEEDGVPFDQEAFDIWKER-IAEDHILLGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
+EIH D++ + A VN D +IEIWN VF+ R + ++ L +DTG+
Sbjct: 178 TEIHVDIRSDEEKAKVPGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPSRNVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQNK S YDTD+F PL+ +E+++ + T + ++ + R++SD+
Sbjct: 238 GFERLCMVLQNKQSNYDTDVFTPLIHKVEEITKSHYNSNGRVTPEQEHINIAIRVISDHI 297
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + A+AD P + + + + F ++ + +L +A +G +P
Sbjct: 298 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLAAQMGATFP 357
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ I ++ EE F +E+ L+L V
Sbjct: 358 ELEKQQLLIMSVIKEEEASF-----------------------LRTLEQGLLMLDV---- 390
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ ++ ++SG AF LYDTYG K++ + + K LT+ E FE +L + KERS
Sbjct: 391 --MIQNSPDKQLSGGKAFELYDTYGFPKDLTALILSEKGLTMDEEGFEVQLQKQKERS-- 446
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
+AA+ V D + L++ DD+ ++ YD L +V
Sbjct: 447 RAAAQVKTDDWVVLRN----DDEEEF-IGYDA-------------LEAVV---------- 478
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
+++ R + D + L+F+ T Y GGQ+ D G + Y+ +T
Sbjct: 479 RLVKYRRVESQKDGTHFQ------LVFNTTPFYPEGGGQVGDKGTLQAANGELIYILDTK 532
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+EN I+H + + P + EV + R H+ +HLL+
Sbjct: 533 KEN------------NLIIHIAEHLPTELNDP---FKAEVHSVAREMAEANHSATHLLHQ 577
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL T QK RV + DFS + + L+ D + VE+ +N I ++ +
Sbjct: 578 ALREVLGTHVEQKGSRVAPEALRFDFSHFAK-LTSDELKEVERLVNKRIFEKIPLQEHRN 636
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + + GE Y D V +I D S+E C GTHV NTG I +I
Sbjct: 637 IPIQQAVESGAMALFGEKYGDRVRMIQFGD-----SKELCGGTHVKNTGDIWFFKIISEG 691
Query: 777 SYNHGVRSIKCLT 789
+ G+R I+ +T
Sbjct: 692 AVAAGIRRIEAIT 704
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG + RVA++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEFFLGHAKPKHKRVADTQKCLRVSGKHNDLEEVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+KR+A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGDYFKREAISWAWELLTE-IYKIPKENLYVT 127
>gi|332299295|ref|YP_004441216.1| alanyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
gi|332176358|gb|AEE12048.1| alanyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
Length = 872
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 270/819 (32%), Positives = 405/819 (49%), Gaps = 105/819 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR +FLD+F GH +V S+P+V D ++ F N+GM QFK++ LG Y R
Sbjct: 2 MTAHDIRQAFLDFF-EEHGHRIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNKEPQYRR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A+SQKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+KR+A + A FLT+ +
Sbjct: 61 AADSQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKREAIKYAWTFLTE-RLQ 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY T FGGS + GL D+E WL+ D I K NFWEMG TGPCG
Sbjct: 120 LPKDRLYVTVFGGSPEEGLSRDDEAASYWLQY-TTEDRIIDGSRKDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E VN D +IEIWN+VF+ + R + PL IDTG+
Sbjct: 179 SEIHIDLRSEEERQAVCGRDLVNKDHPLVIEIWNLVFMQYDRKVDGHLEPLPHKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +Q K S YDTDLF PL+ IE +SG + YG+ +D + R+++D+
Sbjct: 239 GFERLCMAMQGKKSNYDTDLFTPLIRAIETLSGEQ-YGQN------EQVDIAMRVVADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I A+AD P A +R ++R A+ + + L L + E++G+ Y
Sbjct: 292 RTIAFAIADGQLPSNAKAGYVIRRILRRAVRYAYTFLHADEPMLYTLLP-TLNEVMGEAY 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI I ++ EE F LR L G+K L
Sbjct: 351 PEIVAQRELIASVIKEEEESF--LRT--------------------------LAQGLKLL 382
Query: 425 TKQLARDPSITEI-SGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
++ P ++ SG AF LYDTYG ++ + + + + +TL AF++ + E K R+
Sbjct: 383 ESKIQELPQDAKVLSGADAFVLYDTYGFPLDLTELILSERGMTLDQVAFDKLMQEQKSRA 442
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+ AA + D +++ D + TF +G + I
Sbjct: 443 RQAAAIDAADWEVL------------------DEETTESTF-----------VGYETLQI 473
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
+ H +R+ + + + ++ ++ +T YA GGQI D GV Q+ +
Sbjct: 474 ETHILRYRK-------VADKKRSYYQVVLAETPFYAEMGGQIGDKGVL----IAQDGTEY 522
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
I + VH ++S+ P V +R HT +HL++ ALR VL
Sbjct: 523 PIIDTKRENNLPVH---ILSTLPANPKQPFIARVGDELRHLTEANHTATHLMHHALRAVL 579
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIANQVQVDRRHMRASEL 721
T QK V +D DFS + + ++ + +A VE+ +N ++ A++ + ++R++ ++
Sbjct: 580 GTHVEQKGSLVSADLLRFDFSHF-KKVTPEEIAEVERLVNAEIRADRPRDEQRNVPIAKA 638
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
+ + + GE Y D+V +I D S E C GTHV +TG I +I S G
Sbjct: 639 KEMGAMALF-GEKYGDEVRVIKYGD-----SVELCGGTHVASTGQIGFFKIISEGSIAAG 692
Query: 782 VRSIKCLTGDSSKAAVENGKHLSTAAS-FSQILNVGNIP 819
+R I+ +TG ++ V HL F++ LN N+P
Sbjct: 693 IRRIEAVTGPKAEEYVH---HLEEQLQLFNERLN--NVP 726
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG Y R A+SQKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNKEPQYRRAADSQKCLRVSGKHNDLEEVGRDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+KR+A + A FLT+ + LP DRLY T
Sbjct: 93 LGNWSFGDYFKREAIKYAWTFLTE-RLQLPKDRLYVT 128
>gi|228470921|ref|ZP_04055766.1| alanyl-tRNA synthetase [Porphyromonas uenonis 60-3]
gi|228307318|gb|EEK16332.1| alanyl-tRNA synthetase [Porphyromonas uenonis 60-3]
Length = 872
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 269/819 (32%), Positives = 405/819 (49%), Gaps = 105/819 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR +FLD+F GH +V S+P+V D ++ F N+GM QFK++ LG Y R
Sbjct: 2 MTAHDIRQAFLDFF-EEHGHRIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNKEPQYRR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A+SQKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+K++A A FLT+ +
Sbjct: 61 AADSQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKKEAIEFAWTFLTE-RLH 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY T FGGS + GL D+E WL+ D I K NFWEMG TGPCG
Sbjct: 120 LPKDRLYVTVFGGSAEEGLSRDDEAAGYWLQ-HTTEDRIIDGSRKDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSS----ALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E VN D +IEIWN+VF+ + R + + PL IDTG+
Sbjct: 179 SEIHIDLRSEEERQEICGRDLVNKDHPLVIEIWNLVFMQYDRKADGHLEPLPHKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +Q K S YDTDLF PL+ IE +SG + YG+ +D + R+++D+
Sbjct: 239 GFERLCMAMQGKKSNYDTDLFTPLIRAIETLSGEQ-YGQN------EQVDIAMRVVADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I A+AD P A +R ++R A+ + + L L + E++G Y
Sbjct: 292 RTIAFAIADGQLPSNAKAGYVIRRILRRAVRYAYTFLHADEPMLYTLLP-TLNEVMGGAY 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI I ++ EE F LR L G+K L
Sbjct: 351 PEIVAQRELIASVIKEEEESF--LRT--------------------------LAQGLKLL 382
Query: 425 TKQLARDPSITEI-SGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
++ P ++ SG AF LYDTYG ++ + + + + +TL AF++ + E K R+
Sbjct: 383 ESKIQELPQDAKVLSGADAFVLYDTYGFPLDLTELILSERGMTLDQVAFDKLMQEQKSRA 442
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+ AA + D +++ D + TF +G + I
Sbjct: 443 RQAAAVDAADWEVL------------------DEETSESTF-----------VGYETLQI 473
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
+ H +R+ + + + +++ ++ +T YA GGQ+ D GV Q+ +
Sbjct: 474 ETHILRYRK-------VADKKHSYYQVVLAETPFYAEMGGQVGDKGVL----IAQDGTEY 522
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
I + VH ++S+ P V A +R HT +HL++ ALR VL
Sbjct: 523 PILDTKRENNLTVH---ILSTLPADPKQPLIARVGAELRHLTEANHTATHLMHHALRAVL 579
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIANQVQVDRRHMRASEL 721
T QK V +D DFS + + ++ + +A VE+ +N ++ A++ + + R++ ++
Sbjct: 580 GTHVEQKGSLVSADLLRFDFSHF-KKVTPEEIAEVERLVNAEIRADRPRDEHRNVPIAQA 638
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
+ + + GE Y D+V +I D S E C GTHV +TG I +I S G
Sbjct: 639 KEMGAMALF-GEKYGDEVRVIKYGD-----SVELCGGTHVASTGQIGFFKIISEGSIAAG 692
Query: 782 VRSIKCLTGDSSKAAVENGKHLSTAAS-FSQILNVGNIP 819
+R I+ +TG ++ V HL F++ LN N+P
Sbjct: 693 IRRIEAVTGPKAEEYVH---HLEEQLQLFNERLN--NVP 726
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG Y R A+SQKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNKEPQYRRAADSQKCLRVSGKHNDLEEVGRDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A FLT+ + LP DRLY T
Sbjct: 93 LGNWSFGDYFKKEAIEFAWTFLTE-RLHLPKDRLYVT 128
>gi|205830258|sp|A4SGJ6.2|SYA_PROVI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 885
Score = 371 bits (953), Expect = e-99, Method: Compositional matrix adjust.
Identities = 272/812 (33%), Positives = 402/812 (49%), Gaps = 122/812 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR SFLD+F + H +V+S+P++P D ++ F N+GM QFK+VFL Y R
Sbjct: 1 MKSSDIRQSFLDFFVG-KSHAIVRSAPVIPADDPTLLFTNAGMNQFKDVFLAKGTRSYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A++QKC+R GKHNDL GRD+YHHTFFEMLGNWSF DYYK +A A E LT
Sbjct: 60 AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKEEAITWAWELLT-VVWK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPR-DHIKKEGMKCNFWEMGSTGPCGY 190
LP +RLY T + D+E+ IW E R DHI + G K NFWEMG TGPCG
Sbjct: 119 LPEERLYATVYHD--------DDESFRIWEEKTSIRPDHILRFGDKDNFWEMGETGPCGP 170
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIH D+ + S A VNAD IE+WN+VFI + R + PL + ++DTG+GFE
Sbjct: 171 CSEIHIDLTPD-GSGRALVNADDPQAIELWNLVFIQYDRQVDGRLEPLPQRHVDTGMGFE 229
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ ++Q K+S YDTD+F PL +TI +++G + YG + D + R+++D++R +
Sbjct: 230 RVCAVMQGKSSNYDTDVFRPLFDTITELTGVE-YGASMHDPQ----DIAMRVIADHARTL 284
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVKQG---KLVKELSYNIAEILGDVYPEI 367
+ AL+D P + + R V +L + G ++ L +A+ +GDV+PE+
Sbjct: 285 SFALSDGAMP--SNEGRGYVLRRILRRALRYAKDLGYNKPILHRLVATVADSMGDVFPEL 342
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+D + + I+ E F LV +E FN GLV V
Sbjct: 343 RDRQDAVARIVKAEEESF-------------LVTLDRGIEIFN-----GLVGKV------ 378
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
R + + G+ AF LYDTYG ++ + +A++ L + E FE+ + E K R++
Sbjct: 379 --RGEGSSTLEGEDAFKLYDTYGFPFDLTRLMASSAGLQVDGEGFERCMQEQKTRARQ-- 434
Query: 488 ASNVPDIDLMDLKHFPVTDDKYKY--DYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
D + + + +++ D H T Y D +++GI
Sbjct: 435 -------DRREKQRGGAEEGSWEWFSDLHA-TEFTGYDGLEADASIIGI----------- 475
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG--KV 603
+RS ++ L+ D+T YA +GGQ D G E G ++
Sbjct: 476 -----SRSKKNL-----------LLVLDRTPFYAESGGQTGDRGWI-------ETGEYRL 512
Query: 604 EIGELASLEGKIVH-----FGNVVSS------FKVTPGLTSRVEVDARMRLGCMRAHTTS 652
E+ + VH F NV S V PG VD ++R R HT +
Sbjct: 513 EVTDTQKDGDSFVHVVTRAFDNVRDSEADPADIAVGPGRV-HASVDRKLRQATERNHTAT 571
Query: 653 HLLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL+A LR L QK V + DFS + + L+ + + AVE +ND I Q +
Sbjct: 572 HLLHAVLRHTLGAHVQQKGSLVNPERLRFDFSHFSK-LTPEEIDAVESAVNDCI-RQAEA 629
Query: 712 DRRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHI 767
+H +++P+ +T G+ Y D V +++I IS E C GTHV N G I
Sbjct: 630 TLKH---ADVPYDDAITKGALAFFGDKYADLVRVVEIPG----ISVELCGGTHVDNVGQI 682
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN 799
++G S GVR I+ LTG +++ + N
Sbjct: 683 GLFKIVGESSVAAGVRRIEALTGRAAEELMWN 714
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFL Y R A++QKCIR GKHNDL GRD+YHHT
Sbjct: 28 IPADDPTLLFTNAGMNQFKDVFLAKGTRSYSRAADTQKCIRASGKHNDLEDVGRDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK +A A E LT LP +RLY T
Sbjct: 88 FFEMLGNWSFGDYYKEEAITWAWELLT-VVWKLPEERLYAT 127
>gi|145220398|ref|YP_001131107.1| alanyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
gi|145206562|gb|ABP37605.1| alanyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
Length = 893
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 272/812 (33%), Positives = 402/812 (49%), Gaps = 122/812 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR SFLD+F + H +V+S+P++P D ++ F N+GM QFK+VFL Y R
Sbjct: 9 MKSSDIRQSFLDFFVG-KSHAIVRSAPVIPADDPTLLFTNAGMNQFKDVFLAKGTRSYSR 67
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A++QKC+R GKHNDL GRD+YHHTFFEMLGNWSF DYYK +A A E LT
Sbjct: 68 AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKEEAITWAWELLT-VVWK 126
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPR-DHIKKEGMKCNFWEMGSTGPCGY 190
LP +RLY T + D+E+ IW E R DHI + G K NFWEMG TGPCG
Sbjct: 127 LPEERLYATVYHD--------DDESFRIWEEKTSIRPDHILRFGDKDNFWEMGETGPCGP 178
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIH D+ + S A VNAD IE+WN+VFI + R + PL + ++DTG+GFE
Sbjct: 179 CSEIHIDLTPD-GSGRALVNADDPQAIELWNLVFIQYDRQVDGRLEPLPQRHVDTGMGFE 237
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ ++Q K+S YDTD+F PL +TI +++G + YG + D + R+++D++R +
Sbjct: 238 RVCAVMQGKSSNYDTDVFRPLFDTITELTGVE-YGASMHDPQ----DIAMRVIADHARTL 292
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVKQG---KLVKELSYNIAEILGDVYPEI 367
+ AL+D P + + R V +L + G ++ L +A+ +GDV+PE+
Sbjct: 293 SFALSDGAMP--SNEGRGYVLRRILRRALRYAKDLGYNKPILHRLVATVADSMGDVFPEL 350
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+D + + I+ E F LV +E FN GLV V
Sbjct: 351 RDRQDAVARIVKAEEESF-------------LVTLDRGIEIFN-----GLVGKV------ 386
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
R + + G+ AF LYDTYG ++ + +A++ L + E FE+ + E K R++
Sbjct: 387 --RGEGSSTLEGEDAFKLYDTYGFPFDLTRLMASSAGLQVDGEGFERCMQEQKTRARQ-- 442
Query: 488 ASNVPDIDLMDLKHFPVTDDKYKY--DYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
D + + + +++ D H T Y D +++GI
Sbjct: 443 -------DRREKQRGGAEEGSWEWFSDLHA-TEFTGYDGLEADASIIGI----------- 483
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG--KV 603
+RS ++ L+ D+T YA +GGQ D G E G ++
Sbjct: 484 -----SRSKKNL-----------LLVLDRTPFYAESGGQTGDRGWI-------ETGEYRL 520
Query: 604 EIGELASLEGKIVH-----FGNVVSS------FKVTPGLTSRVEVDARMRLGCMRAHTTS 652
E+ + VH F NV S V PG VD ++R R HT +
Sbjct: 521 EVTDTQKDGDSFVHVVTRAFDNVRDSEADPADIAVGPGRV-HASVDRKLRQATERNHTAT 579
Query: 653 HLLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL+A LR L QK V + DFS + + L+ + + AVE +ND I Q +
Sbjct: 580 HLLHAVLRHTLGAHVQQKGSLVNPERLRFDFSHFSK-LTPEEIDAVESAVNDCI-RQAEA 637
Query: 712 DRRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHI 767
+H +++P+ +T G+ Y D V +++I IS E C GTHV N G I
Sbjct: 638 TLKH---ADVPYDDAITKGALAFFGDKYADLVRVVEIPG----ISVELCGGTHVDNVGQI 690
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN 799
++G S GVR I+ LTG +++ + N
Sbjct: 691 GLFKIVGESSVAAGVRRIEALTGRAAEELMWN 722
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFL Y R A++QKCIR GKHNDL GRD+YHHT
Sbjct: 36 IPADDPTLLFTNAGMNQFKDVFLAKGTRSYSRAADTQKCIRASGKHNDLEDVGRDTYHHT 95
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK +A A E LT LP +RLY T
Sbjct: 96 FFEMLGNWSFGDYYKEEAITWAWELLT-VVWKLPEERLYAT 135
>gi|299751839|ref|XP_001830532.2| tRNA synthetase class II [Coprinopsis cinerea okayama7#130]
gi|298409558|gb|EAU91282.2| tRNA synthetase class II [Coprinopsis cinerea okayama7#130]
Length = 968
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 261/821 (31%), Positives = 383/821 (46%), Gaps = 105/821 (12%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----A 67
S+ +R F +YF + HT V+SSP +P+ D ++ F N+GM Q+K++FLG +
Sbjct: 12 TSRRVREEFFEYF-RARDHTFVRSSPTIPFDDPTLLFANAGMNQYKSIFLGTVDPNSELS 70
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A + + + LT+
Sbjct: 71 KVKRAFNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIKYSWDLLTR 130
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW------- 180
L DRLY TYF G GL D E ++ WLE +P D + K NFW
Sbjct: 131 V-YGLSPDRLYVTYFEGDPANGLEPDLEAKECWLEY-LPEDRVLPGNAKDNFWGAWCHPP 188
Query: 181 ------EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADT 234
G G EIHYD G +A VN D D++EIWN VFI R T
Sbjct: 189 ELDLANRRGRDGRYRSLREIHYDRIGGRQAAHL-VNQDDPDVLEIWNNVFIQFNREPDGT 247
Query: 235 IVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRT 294
+ PL ++DTG+GFERLV+++Q+K S YDTD+F P+ I+++SG +PY F +
Sbjct: 248 LKPLPAKHVDTGMGFERLVSVIQDKRSNYDTDVFTPIFAKIQELSGVRPYEGRFGADDAD 307
Query: 295 DLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKE 351
+DT+YR+++D+ R +T AL+D P+ + LR V+R + V G
Sbjct: 308 GIDTAYRVVADHVRTLTFALSDGGVPNNVGRGYVLRRVLRRGSRYARKKLGVPIGSFFSS 367
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
L + E +GD++PEI ++ I+ IL EE E F+
Sbjct: 368 LMPVVVETMGDIFPEITKKVDDIKEILDEEE------------------------ESFSR 403
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
+ G L +Y K A+ E+SG + LYDTYG ++ + +A L +
Sbjct: 404 TLDRGEKLFDQYAAK--AKAEGRKELSGADVWRLYDTYGFPVDLTRLMAEELGLGINDAE 461
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHF---------PVTDDKYKYDYHYDTNSKRY 522
FE+ + KE SK A + +I +D+ P TDD K+ T +
Sbjct: 462 FEEAQRKSKEASKGTAKKDTAEIVKLDVHELAILEKDDSVPKTDDSAKFGTGNITAT--- 518
Query: 523 TFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAG 582
V ++ D+ F I +A G+I DKT+ YA +G
Sbjct: 519 ---------VKAIVYDKKFLTSTQDI--------------PEDATFGVILDKTSFYAESG 555
Query: 583 GQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMR 642
GQ D G + E+ + G +VH G++ ++ G D R
Sbjct: 556 GQEYDTGNIVIDGAAD----FEVTNVQVYNGYVVHTGHLKYG-QLDVGSEVISSYDELRR 610
Query: 643 LGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYI 701
HT +H+LN ALR VL QK V + DFS + +++ + +E
Sbjct: 611 WPLRNNHTATHILNFALREVLGDHVDQKGSLVAPTKLRFDFS-HKAGITLPELTKIESMS 669
Query: 702 NDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--------SDKENVISR 753
D I V+V + + + + L + GE YP+ V ++ + +D EN R
Sbjct: 670 IDWIKKNVKVYGKDLDLNLAQKIPGLRAVFGETYPNPVRVVTLEYSVDEIAADIENPKWR 729
Query: 754 ----EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
E C GTHV TG I+ + G+R I +TG
Sbjct: 730 QTSIEFCGGTHVAKTGDIKGFVITEESGIAKGIRRIIAVTG 770
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IP+ D ++ F N+GM Q+K++FLG + R NSQKCIR GGKHNDL G+D
Sbjct: 38 IPFDDPTLLFANAGMNQYKSIFLGTVDPNSELSKVKRAFNSQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + + + LT+ L DRLY T+
Sbjct: 98 SYHHTFFEMLGNWSFGDYFKKEAIKYSWDLLTR-VYGLSPDRLYVTY 143
>gi|110597674|ref|ZP_01385959.1| alanyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
gi|110340794|gb|EAT59271.1| alanyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
Length = 901
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 261/800 (32%), Positives = 401/800 (50%), Gaps = 106/800 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR SFLD+F +GHT+V+S+P++P D ++ F N+GM QFK+VFL PY R
Sbjct: 16 MNSREIRQSFLDFFAQ-KGHTIVRSAPVIPADDPTLLFTNAGMNQFKDVFLDKGTRPYNR 74
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A++QKC+R GKHNDL GRD+YHHTFFEMLGNWSF DYYK++A A E +T
Sbjct: 75 AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKKEAITWAWELMTG-VWK 133
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLE-LGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP DRLY T + D+E+ IW + + +HI + G K NFWEMG TGPCG
Sbjct: 134 LPADRLYATVY--------QDDDESFQIWKDHTSISPEHILRFGDKDNFWEMGETGPCGP 185
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIH D+ + +S + VN +IE+WN+VFI + R S + PL ++DTG+GFE
Sbjct: 186 CSEIHIDLT-DDASGKSLVNVGDYRVIELWNLVFIQYNRQSDGRLEPLPNKHVDTGMGFE 244
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ ++Q K+S YDTD+F PL + I +++G + YG + + D + R+++D++R +
Sbjct: 245 RVAAVMQGKSSNYDTDVFKPLFDRITEITGVR-YGASMDEPH----DIAMRVIADHARTL 299
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVKQG---KLVKELSYNIAEILGDVYPEI 367
T AL+D P + + R V +L + G ++ +L +A+ +GDV+PE+
Sbjct: 300 TFALSDGAMP--SNEGRGYVLRRILRRALRYSKNLGYNEPILHQLVGTLADSMGDVFPEL 357
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ + + I+ E F +V +E FN ++K
Sbjct: 358 KKQRDTVSKIIRSEEESF-------------IVTLDRGIEIFN-----------DVVSK- 392
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
R T I G AF LYDTYG ++ + +A+ + L + E FE + E K R++A
Sbjct: 393 -VRSAKGTVIKGVDAFKLYDTYGFPFDLTRLMASDEGLQVDGEGFEHCMQEQKTRARA-- 449
Query: 488 ASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV-FCIDKH 546
D K K+ D + + T+ VG +Q+ +
Sbjct: 450 ------------------DRKEKHQIEEDGSQWLWFSDQHATSFVGY---EQLELPVRII 488
Query: 547 AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG----VAYLTNTTQ--EN 600
A +HA+ I + DKT YA +GGQ+ D G +Y T ++
Sbjct: 489 ACKHAKEKLLI-------------LLDKTPFYAESGGQVGDRGWIETASYRLQVTDTVKD 535
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPG-LTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
G + + + KI+ + + G L++ VD +R R HT +HLL+ AL
Sbjct: 536 GDAIVHVVTAAFDKILDTAVNPADLTIDEGQLSAEASVDHHIRQDTERNHTATHLLHGAL 595
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
RR+L QK V + DFS + + +S +A VE +N+ I +V +
Sbjct: 596 RRILGQHVQQKGSYVNPERLRFDFSHFSK-MSDAEIARVEASVNEEIRRAEEVQKH---- 650
Query: 719 SELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
+++P+ + G+ Y D V ++++ IS E C GTHV N G I ++
Sbjct: 651 ADIPYDDAIAKGALAFFGDKYADLVRVVEVPG----ISVELCGGTHVDNIGRIGLFKIVS 706
Query: 775 YKSYNHGVRSIKCLTGDSSK 794
S GVR I+ LTG S++
Sbjct: 707 ESSVASGVRRIEALTGKSAE 726
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFL PY R A++QKCIR GKHNDL GRD+YHHT
Sbjct: 43 IPADDPTLLFTNAGMNQFKDVFLDKGTRPYNRAADTQKCIRASGKHNDLEDVGRDTYHHT 102
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK++A A E +T LP DRLY T
Sbjct: 103 FFEMLGNWSFGDYYKKEAITWAWELMTG-VWKLPADRLYAT 142
>gi|374855208|dbj|BAL58071.1| alanyl-tRNA synthetase [uncultured Chloroflexi bacterium]
Length = 913
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 263/800 (32%), Positives = 380/800 (47%), Gaps = 77/800 (9%)
Query: 8 SYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPA 67
S R IR +F+D+F +GHT V SS +VP GD ++ F NSGM QFK+VFLG
Sbjct: 2 SRKRFSGAEIRETFIDFFVQ-RGHTFVPSSSLVPGGDATLLFTNSGMVQFKDVFLGTDKR 60
Query: 68 PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 127
PY R ANSQKC+RV GKHNDL GRD HHTFFEMLGNWSF DYYK++A A E LT+
Sbjct: 61 PYRRAANSQKCMRVSGKHNDLDDVGRDDTHHTFFEMLGNWSFGDYYKKEAIAWAWELLTE 120
Query: 128 PPVSLPLDRLYFTYFGGSDQYG-LPCDEETRDIW-LELGVPRDHIKKEGMKCNFWEMGST 185
LP +RL+ T F D+ G +P DEE + W + G DH+ G K NFWEM T
Sbjct: 121 -VWGLPKERLWATCF--KDEKGKIPTDEEAAEHWRAQPGFLPDHVLFFGRKENFWEMAET 177
Query: 186 GPCGYSSEIHYDM------KGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLS 239
GPCG SEIH D+ K + + RVN D +E+WN+VF+ + R+ A+T+ PL
Sbjct: 178 GPCGPCSEIHIDLGEAFCDKKDVPGHICRVNGDCKRFLELWNLVFMQYNRLDAETLQPLP 237
Query: 240 KNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLD-T 298
++DTG+G ER+V +LQ S Y TDLF+PL+E + ++G T D T
Sbjct: 238 ARHVDTGMGLERIVAVLQGTNSNYKTDLFIPLIERVRALTG--------HTLEEVYADFT 289
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYN 355
YR+++D+ R +AD + P + R V+R A + + + E++
Sbjct: 290 PYRVIADHGRAAAFLIADGVVPGNAGRNYICRMVIRRAARFGNKIGLER--PFLAEVAEA 347
Query: 356 IAEILGDVYPEIQDSINKI-QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
+ E G YPE+Q + + I I EE R L A + Q L++ E
Sbjct: 348 VIENYGRFYPELQRNRSLILDTITLEEKRFARALDVAT-------YRLQEMLDELKAAGE 400
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
L SG +AF LY T G+ I +++A + L + F Q
Sbjct: 401 RTL--------------------SGRLAFDLYATSGMPFEIARDIAREQGLEIEETGFRQ 440
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ E R + A + + D + F K + +Y P + G
Sbjct: 441 AMEE--HRLASGAGKAMGPLGGEDAEFFSGLLKKLQEQGELPAEGVQYD-PYTKLRVSGK 497
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
V+ + + A +G ++ +I +T Y AGGQ+ D GV
Sbjct: 498 VL---ALVHEGEEVEAANAGDRVE-----------VILPETGFYVEAGGQVSDTGVIRAA 543
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+ E ++ + A+ G I H G V+ + G + EVD R MR HT +HL
Sbjct: 544 DGHWEIEVQDVRKPAA--GVITHVGEVIFG-QPRRGDLANAEVDQERRHDIMRNHTATHL 600
Query: 655 LNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
L+AAL +VL Q V D DF+ Y + L+ +A +E+ +N++IA V
Sbjct: 601 LHAALHQVLGPGATQAGSLVAPDRLRFDFN-YPQALTPAQLAEIERRVNEMIAADWPVQP 659
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
+ + E + GE Y + V + I D+ +IS E C GTH+ T ++
Sbjct: 660 VYKKREE-AIAEGAMALFGEKYGETVRTLRIGDESRLISYELCGGTHLSRTSDAGMFLIV 718
Query: 774 GYKSYNHGVRSIKCLTGDSS 793
S VR I+ +TG +
Sbjct: 719 SESSVGTNVRRIEAVTGRGA 738
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P GD ++ F NSGM QFK+VFLG PY R ANSQKC+RV GKHNDL GRD HHT
Sbjct: 33 VPGGDATLLFTNSGMVQFKDVFLGTDKRPYRRAANSQKCMRVSGKHNDLDDVGRDDTHHT 92
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK++A A E LT+ LP +RL+ T
Sbjct: 93 FFEMLGNWSFGDYYKKEAIAWAWELLTE-VWGLPKERLWAT 132
>gi|300770787|ref|ZP_07080665.1| alanine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762344|gb|EFK59162.1| alanine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
Length = 893
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 267/820 (32%), Positives = 392/820 (47%), Gaps = 113/820 (13%)
Query: 10 VRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPY 69
+ + ++ IR +FL++F ++ H +V S+P+V D ++ F N+GM QFK+ FLG Y
Sbjct: 21 ISMTNREIREAFLNFF-KSKNHQIVPSAPVVVKNDPTLMFTNAGMNQFKDFFLGEAQPKY 79
Query: 70 PRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP 129
R+A++Q+C+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT
Sbjct: 80 SRIADTQRCLRVSGKHNDLEEVGIDTYHHTLFEMLGNWSFGDYFKKEAIEWAWELLT-VV 138
Query: 130 VSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
L DRLY T F G D GL D E D W + D I K NFWEMG TGPCG
Sbjct: 139 YKLDKDRLYVTIFEGDDSEGLVKDTEAYDFWKSW-ISEDRILLGNKKDNFWEMGETGPCG 197
Query: 190 YSSEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYI 243
SEIHYDM+ E P +L VNAD +IEIWN+VF+ R+ ++ L ++
Sbjct: 198 PCSEIHYDMRTEEERRTTPGQSL--VNADHPQVIEIWNLVFMQFNRLKNGSLESLPAKHV 255
Query: 244 DTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRML 303
DTG+GFERLV +Q K+S YDTD+F P++ I A+ G + RTD+ + R+L
Sbjct: 256 DTGMGFERLVRAIQGKSSNYDTDVFQPMIAFI-----AQKAGIQYGADERTDI--AMRVL 308
Query: 304 SDYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL 360
SD+ R ++ A+AD P A +R ++R A+ + K + EL +A+
Sbjct: 309 SDHIRAVSFAIADGQLPSNNKAGYVIRRILRRAVRYAYTFLNFKT-PFINELVPLLAKEF 367
Query: 361 GDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
V+ E+ + +Q ++ EE F LR LV G
Sbjct: 368 EGVFDELIQQQDFVQKVVLEEEVSF--LRT--------------------------LVTG 399
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
V+ + S T + G+ AF L+DTYG ++ + LA K + + F++ L K
Sbjct: 400 VQRFE---SYAESNTAVGGEFAFELFDTYGFPIDLTELLAREKGMEVDMAGFQEALQIQK 456
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
+RS+A A + D V + DQV
Sbjct: 457 DRSRAATAIDTGD-------------------------------------WVAVSEDDQV 479
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
+ ++ + + L+ T YA GGQ+ D GV L+ +T E
Sbjct: 480 EFVGYDNLKATTEIVKYRKVTAKGKEQYQLVLSVTPFYAEGGGQVGDSGV-LLSESTGE- 537
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
K+ I + G IVHF N + V T +VD + RL H+ +HLL+AAL+
Sbjct: 538 -KIYITDTKKENGLIVHFTN---TLPVQMEGTFEAKVDVQKRLDTENNHSATHLLHAALK 593
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRHMRA 718
VL T QK V +D D S + + ++ + + VE +N I + + ++RH
Sbjct: 594 EVLGTHVNQKGSLVNADILRFDISHFAK-VTEEELKQVEDIVNAKIRENIPLKEQRH--- 649
Query: 719 SELPFLTHL----TVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
+PF L T + GE Y D V +I D+ S+E C GTHV TG I +I
Sbjct: 650 --VPFQQALDSGVTALFGEKYGDYVRVITFDDQ---FSKELCGGTHVKATGQIGFFKIIS 704
Query: 775 YKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILN 814
+ GVR I+ +TG A + +H ++L+
Sbjct: 705 ESAVAAGVRRIEAITGTKCAAVIR--EHFDLVHRLGELLH 742
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ FLG Y R+A++Q+C+RV GKHNDL G D+YHHT FEM
Sbjct: 54 DPTLMFTNAGMNQFKDFFLGEAQPKYSRIADTQRCLRVSGKHNDLEEVGIDTYHHTLFEM 113
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT L DRLY T
Sbjct: 114 LGNWSFGDYFKKEAIEWAWELLT-VVYKLDKDRLYVT 149
>gi|428673262|gb|EKX74175.1| alanyl-tRNA synthetase, putative [Babesia equi]
Length = 952
Score = 370 bits (949), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 263/844 (31%), Positives = 425/844 (50%), Gaps = 95/844 (11%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP--- 70
S +RS F+ YF +GH S+ ++P D ++ FVN+GM QFK++ +G +
Sbjct: 4 SSWVRSEFIKYF-EKKGHVHWPSASVLPCNDPTLLFVNAGMNQFKDIIMGKSDESTEFGR 62
Query: 71 --RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
RVANSQKC+R GGKHNDL G D YH+TFFEMLGNWSF DY+K++A A E LT
Sbjct: 63 LRRVANSQKCIRAGGKHNDLDDVGHDCYHNTFFEMLGNWSFGDYFKKEAIEYAFELLT-T 121
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
L DRLY TYFGG + P D+E R IW++ +P + I G+K NFWEM GPC
Sbjct: 122 VYGLDKDRLYVTYFGGDPKISCPPDDEARKIWMQY-LPEERILPFGLKDNFWEMADVGPC 180
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G SEIHYD G +A + VNAD ++EIWN+VF+ + R S T+ PL + +DTG+G
Sbjct: 181 GPCSEIHYDHVGNRDAA-SLVNADDPQVVEIWNLVFMQYNRKSDGTLEPLPRPCVDTGMG 239
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETI-EKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
ERL +L +S YD D+ ++ I EKV G Y + +DT+YR+++D+
Sbjct: 240 LERLCAVLLGSSSNYDADVLSTVMNVIHEKVPGLPAYSGSLNI-----VDTAYRVVADHV 294
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T+A+AD ++P + LR ++R A+ + + V G + L ++ GD Y
Sbjct: 295 RCLTIAIADGVYPSNDGRGYVLRRILRRAVRYAREHLGV-DGPFLHTLVDSLVNTYGDAY 353
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
E+ ++ + ++ I+ EE +F + ++ ++K
Sbjct: 354 KEVVENKDIVKSIIHEEEELFLKTLDKGRERFRRMIKQ---------------------- 391
Query: 425 TKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
+Q + D S + +S AF LY +YG ++ +A + + + F+++L + +E
Sbjct: 392 AQQASPDGSTSGQAIVSAQDAFLLYSSYGFPLDLTVLMAKEYGVGVDTDGFKEELKKHQE 451
Query: 482 RS-----KAKAASNVPD---IDLMDL--KHFP--VTDDKYKYDYHYDTNSKRYTFPCLDT 529
+S K A +N+ + D +D+ KH +TDD KY + +
Sbjct: 452 KSDRRVNKDDAFANLLESLSADKLDVISKHCNGVLTDDSAKYQWSSEDPK---------- 501
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
+Q+F D + G D ++ L+ D T YA GGQI D G
Sbjct: 502 --------EQIF--DAKVLAIWTEGGLQD---VQDADVFALVTDVTPFYAEGGGQIYDEG 548
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSS-FKVTPGLTSRVEVDARMRLGCMRA 648
+T Q + ++ + G + HF + + RV+ D R+++ C
Sbjct: 549 ---FIDTCQ------VHKVYKMSGLVFHFCTAGDTPIHAGSTVKMRVDYDRRVKVAC--N 597
Query: 649 HTTSHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
HT +HLLN LR + T Q+ ++ +++ DF+ G LS D + +E+ + + I+ +
Sbjct: 598 HTCTHLLNFVLRDINKDTKQRGSQLDAEKLKFDFNGSG-ALSEDVLQEIERKLANFISKE 656
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENV-ISREPCCGTHVFNTGHI 767
++V + + E ++ + E YP+ V ++ + + + S E C GTH+ NT I
Sbjct: 657 LEVVTKSIPYKEALEISGIRANFDEKYPEIVRVVSVGKDDGLSTSIEVCGGTHLGNTKTI 716
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIPYGDD-SIA 826
+S VIG + + GVR + +T S A N KH T+ + + ++ +I G D S+A
Sbjct: 717 QSAYVIGEEGISKGVRRLTLVTNAQSATAASNLKHFETSLD-NLVGSLKDIKMGGDTSLA 775
Query: 827 FVNS 830
F+N+
Sbjct: 776 FMNA 779
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ FVN+GM QFK++ +G + RVANSQKCIR GGKHNDL G D
Sbjct: 29 LPCNDPTLLFVNAGMNQFKDIIMGKSDESTEFGRLRRVANSQKCIRAGGKHNDLDDVGHD 88
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YH+TFFEMLGNWSF DY+K++A A E LT L DRLY T+
Sbjct: 89 CYHNTFFEMLGNWSFGDYFKKEAIEYAFELLT-TVYGLDKDRLYVTY 134
>gi|406663250|ref|ZP_11071314.1| Alanine--tRNA ligase [Cecembia lonarensis LW9]
gi|405552701|gb|EKB48054.1| Alanine--tRNA ligase [Cecembia lonarensis LW9]
Length = 877
Score = 370 bits (949), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 271/804 (33%), Positives = 390/804 (48%), Gaps = 107/804 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K IRS+F+ +F + Q H V SSPIV D ++ F N+GM QFK+ FLG + R
Sbjct: 1 MEAKKIRSTFIAFFQSKQ-HQYVASSPIVVKNDPTLMFTNAGMNQFKDFFLGNDIPKFTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VANSQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K+DA A E LT+
Sbjct: 60 VANSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKDAIEWAWELLTE-VYG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY + FGG L D E DIW + VP D I K NFWEMG TGPCG
Sbjct: 119 LPKDRLYVSVFGGDAGDKLEKDTEAFDIWKGI-VPEDRILFGSKKDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGE----PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E + VN D +IEIWN+VF+ R++ ++ L ++DTG+
Sbjct: 178 SEIHIDLRTEEERNKENGYDLVNNDHPQVIEIWNLVFMQFNRLADGSLKELPAKHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV +Q K+S YDTD+F+P + +E SG K YGR T D + R++ D+
Sbjct: 238 GFERLVRAIQQKSSNYDTDVFMPFIHAVEMKSG-KSYGRDEKT------DIAMRVIVDHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I +AD P A +R ++R A+ F Q + EL +AE G+++
Sbjct: 291 RAIAFTIADGQLPSNNKAGYVIRRILRRAVRYGY-TFLGFQKPFLYELMPLLAENFGEIF 349
Query: 365 PEI---QDSINKIQLILGEES---RIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
PE+ QD I K+ I+ EE+ R DN K + + + KT +L
Sbjct: 350 PEVAAQQDFIAKV--IMEEEASFLRTLDNGLKKLDQIKEEMSKTGSQL------------ 395
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
+ G +AF LYDTYG ++ +A ++ F +++
Sbjct: 396 ------------------VDGKVAFELYDTYGFPLDLTSLIARESGYSVDESGFTKEMEV 437
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
K RS+A A D ++ H + YDY +
Sbjct: 438 QKSRSRAAAEQETGDWVMV---HEEEGVEFVGYDY----------------------LQS 472
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
Q I I+ + D Q L+ D+T YA +GGQ+ D G +L +
Sbjct: 473 QSRIIKYRQIKDKKG----DRYQ--------LVLDRTPFYAESGGQVGDQG--WLQS--- 515
Query: 599 ENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
E ++++ + IVHF V P + +V+ + R M H+ +HLL+AA
Sbjct: 516 EGERIQVLDTKKENDLIVHF---VDRLPADPKVVFAAQVNEQKRRLTMSNHSATHLLHAA 572
Query: 659 LRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
LR+VL QK V D DFS + + ++ + + VE+ +N I + + +
Sbjct: 573 LRQVLGGHVQQKGSLVNEDVLRFDFSHFAK-MTEEELTEVEQIVNTKIRENIALGEQRNV 631
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E T + GE Y D V +I + S E C GTHV TG+I ++ S
Sbjct: 632 PIEDAKKQGATALFGEKYGDFVRVITF---DRHFSVELCGGTHVPATGNIGLFKIVSEGS 688
Query: 778 YNHGVRSIKCLTGDSSKAAVENGK 801
+ GVR I+ +T S+++ V NG+
Sbjct: 689 ISAGVRRIEAITAKSAESYV-NGQ 711
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ FLG + RVANSQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDFFLGNDIPKFTRVANSQKCLRVSGKHNDLEEVGVDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K+DA A E LT+ LP DRLY +
Sbjct: 92 LGNWSFGDYFKKDAIEWAWELLTE-VYGLPKDRLYVS 127
>gi|313676999|ref|YP_004054995.1| alanyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
gi|312943697|gb|ADR22887.1| alanyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
Length = 876
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 261/814 (32%), Positives = 405/814 (49%), Gaps = 109/814 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR FL++F + H +V S+P+V D ++ F N+GM QFK+ FLG A R
Sbjct: 1 MTSSEIRKKFLNFFQEKE-HKIVPSAPMVIKDDPTLMFTNAGMNQFKDYFLGNKVAEATR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V ++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A + E LT
Sbjct: 60 VTDTQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIEWSWELLT-DIFK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP +RLY T F G G+P D+E D W + + I K NFWEMG TGPCG +
Sbjct: 119 LPKERLYVTVFEGDKADGIPFDQEAYDFW-KGHIDESRILKGDKNDNFWEMGDTGPCGPA 177
Query: 192 SEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ E P L VN D ++EIWN+VFI R + ++ L +IDT
Sbjct: 178 SEIHVDLRDEADIAKIPGKDL--VNNDHPLVVEIWNLVFIQFNRKADGSLHALPAQHIDT 235
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFER+ +QNK S YDTD+F PLL+ + K+SG K YG + +D ++R++ D
Sbjct: 236 GMGFERICMAIQNKKSNYDTDVFTPLLDELAKISG-KKYGEL------SKIDIAFRVIVD 288
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I+++++D P A +R ++R A+ +K+ L K L +A+ +
Sbjct: 289 HIRAISLSISDGQLPSNNKAGYVIRRILRRAVRYGYTFLDLKEPFLFK-LVPILAKQFEE 347
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
V+PE++ ++ ++ EE F + +K ++
Sbjct: 348 VFPELKAQQELVEKVIKEEETAFLRTLENGLKR-------------------------LE 382
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+ +L+ + T ISG +AF LYDTYG ++ +A LT+ + FEQ +NE K R
Sbjct: 383 SIKAELSSSGNAT-ISGAVAFELYDTYGFPLDLTALIAKENGLTVDEKGFEQAMNEQKNR 441
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
SK+ A D ++ N R D VG D+V
Sbjct: 442 SKSAAKMETGDWQIV--------------------NEGR------DVEFVGY---DEVKA 472
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
D +R+ S++ ++ + L+ DKT YA +GGQI D G+ ++N T
Sbjct: 473 -DAKILRYR-------SVKNKNKEQIQLVLDKTPFYAESGGQIGDTGILKVSNET----- 519
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRV--EVDARMRLGCMRAHTTSHLLNAALR 660
+++ + IVHF + K+ L ++V ++D R + H+ +HL++AALR
Sbjct: 520 IKVLDTKKENDLIVHFVD-----KIPAQLDAKVHAQIDNDRRRKIVYNHSATHLVHAALR 574
Query: 661 RVLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQV-QVDRRHMRA 718
VL Q+ + SD+ DFS + + ++ + + VE+ +N+ I + Q + R++
Sbjct: 575 EVLGDHVQQKGSLVSDKLLRFDFSHFSK-MTDEEILKVERRVNEKIRENIPQQEERNIPI 633
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
E + + GE Y D V +I +V E C G HV TG+I + S
Sbjct: 634 EEAKAKGAMALF-GEKYGDTVRMITFDPNYSV---ELCGGVHVPATGNIGQFKITTETSV 689
Query: 779 NHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQI 812
G+R I+ +TG+ ++ HL A Q+
Sbjct: 690 AAGIRRIEAVTGEKAEEY-----HLDQEAILKQV 718
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ FLG A RV ++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDYFLGNKVAEATRVTDTQKCLRVSGKHNDLEEVGHDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A + E LT LP +RLY T
Sbjct: 92 LGNWSFGDYFKKEAIEWSWELLT-DIFKLPKERLYVT 127
>gi|154288058|ref|XP_001544824.1| hypothetical protein HCAG_01871 [Ajellomyces capsulatus NAm1]
gi|150408465|gb|EDN04006.1| hypothetical protein HCAG_01871 [Ajellomyces capsulatus NAm1]
Length = 910
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 257/822 (31%), Positives = 399/822 (48%), Gaps = 149/822 (18%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R++FLD+F GHT V SS +VP D ++ F N+GM Q+K++FLG A R
Sbjct: 17 VRNAFLDFF-KENGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDFATLRR 75
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A R + + LTK
Sbjct: 76 AHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIRYSWDLLTKV-YG 134
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L RLY TYF G+ G+ D E +++WL +GV DH+ MK NFWEMG GPCG
Sbjct: 135 LNPARLYVTYFEGNPDAGIGPDLEAKELWLSVGVAEDHLLSGNMKDNFWEMGEQGPCGPC 194
Query: 192 SEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIHYD + G +S L VN D +++EIWN VFI + R ++ PL ++DTG+G+E
Sbjct: 195 SEIHYDRIGGRNASHL--VNQDDPNVLEIWNNVFIQYNREPDKSLRPLPNKHVDTGMGYE 252
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV+ILQNK+S YDTD+F PL I +++G +PY F + +DT+YR+++D+ R +
Sbjct: 253 RLVSILQNKSSNYDTDVFTPLFGKISEITGCRPYTGKFHDEDTDGIDTAYRVVADHVRTL 312
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
T A++D P+ + +R V+R + V+ G ++ + + +GD++PEI
Sbjct: 313 TFAISDGASPNNEGRGYVVRRVLRRGARYARKYLNVEIGGFFSKIVPTLVDQMGDMFPEI 372
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ + IL EE F K L + + E++ +
Sbjct: 373 RRKQTDVMEILDEEEISFA----------KTLDRGERLFEEYALQ--------------- 407
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
A+ ++ G + LYDT+G ++ + +A + LT+ + FE+ + KE SK +
Sbjct: 408 -AKQKGFGKLHGADVWRLYDTFGFPVDLTRLMAEERGLTIDNAEFEEARLKAKEASKGQG 466
Query: 488 AS-------NVPDIDLMD-LKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
V D+ L++ ++ P T++ K+ T+ + + + N V
Sbjct: 467 KRTADVVKLTVHDLGLLETMEDVPKTNEDAKFGRGNITSQIKAIY--YNKNFV------- 517
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
+ +H G G+I D+TN YA GGQ +D G +
Sbjct: 518 ------DSTKHIPQGEQF-----------GIILDRTNFYAEQGGQENDTGKIII------ 554
Query: 600 NGKVEIG--ELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+GK E+ ++ L I H G++V++ K+ R A + S L
Sbjct: 555 DGKAELAVEDVQVLGDGIEHNGSLVAAEKL------------RFDFSHKSAVSDSDL--E 600
Query: 658 ALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
+ R+ T +++C V++ + L A + I+ V A
Sbjct: 601 KIERISTDYIRQNCAVYAKDVPL---------------ATARGISGVRA----------- 634
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDK-----ENV-------ISREPCCGTHVFNTG 765
+ GE YPD V ++ + + +NV IS E C GTHV TG
Sbjct: 635 ------------VFGETYPDPVRVVSVGVELEEILQNVHDPRWKDISIEFCGGTHVQKTG 682
Query: 766 HIESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHL 803
I+ ++ G+R I +TG+ + + A E G+ L
Sbjct: 683 DIKDLVILEESGIAKGIRRIIAVTGEEAHEVQRIAKEFGERL 724
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R NSQKCIR GGKHNDL G+D
Sbjct: 39 VPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDFATLRRAHNSQKCIRAGGKHNDLDDVGKD 98
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A R + + LTK L RLY T+
Sbjct: 99 SYHHTFFEMLGNWSFGDYFKKEAIRYSWDLLTK-VYGLNPARLYVTY 144
>gi|424842755|ref|ZP_18267380.1| alanine--tRNA ligase [Saprospira grandis DSM 2844]
gi|395320953|gb|EJF53874.1| alanine--tRNA ligase [Saprospira grandis DSM 2844]
Length = 875
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 257/797 (32%), Positives = 382/797 (47%), Gaps = 110/797 (13%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+K+IR FLD+F ++GH +V S+P+V D ++ F+NSGM QFK+ FLG +P PR+
Sbjct: 3 TAKAIRQEFLDFF-ESKGHQIVASAPVVNQNDPTLMFINSGMAQFKDYFLGNQESPSPRI 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSL 132
A++QKC+RV GKHNDL GRDSYH T FEMLGNWSF DY+K++A A E LT+ +
Sbjct: 62 ADTQKCLRVSGKHNDLEDVGRDSYHQTLFEMLGNWSFGDYFKQEAIDWAWELLTE-RYGI 120
Query: 133 PLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSS 192
+RLY T FGG + LP DEE +W E VP+D I + K NFWEMG GPCG +
Sbjct: 121 DPERLYITVFGGDEADDLPADEEAEKMW-EKWVPKDRILRFDRKDNFWEMGDQGPCGPCA 179
Query: 193 EIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
EIH D++ E A VN D +IEIWN+VF+ R++ +VPL +IDTG+G
Sbjct: 180 EIHIDLRSEEERAAKDGKELVNMDDPMVIEIWNLVFMQFNRMADGKLVPLKNKHIDTGMG 239
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
ERL +LQNKTS Y TDLF P++E IE +SG + Y ++ +D+ + R+++D+ R
Sbjct: 240 LERLCMVLQNKTSNYTTDLFSPIIEKIEALSGFE-YKDDYSPKALSDI--AMRVIADHVR 296
Query: 309 MITVALADNMFPDATAKLRNVVRDALLISEDVFKV--KQGKLVKELSYNIAEILGDVYPE 366
+ + +AD P T V R F +Q ++ L +AE+ +V+PE
Sbjct: 297 AVALVIADGQLPSNTGAGYVVRRVLRRAVRYYFSFLNRQEPMIHLLVPVVAEMFKEVFPE 356
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ + I ++ E F + L +EQ I
Sbjct: 357 LAAQEDFICKMVKSEEEAF----------LRTLANGLKRIEQLEIQN------------- 393
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
E+ G AF L+DT+G ++ +A K T+ + F+ L E K+RS+A
Sbjct: 394 --------NELPGQTAFELFDTFGFPIDLSLLIAKEKGWTVDLKGFQAALAEQKKRSQAD 445
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
AA +V D +++ Y D+ R
Sbjct: 446 AAKDVADWVILEEGQTEFV------GYEKDSCQSRL------------------------ 475
Query: 547 AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY-------LTNTTQE 599
+++ + + ++ L+ ++T Y GGQ+ D G+ + + NT +E
Sbjct: 476 -LKYRK-------LVVKKKTQYQLVLEQTPFYPEGGGQVGDTGLLFFGEEKIPVINTLKE 527
Query: 600 NGKVEIGELASLEGKI-VHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
N + S+ K+ VV R E++A R H+ +HLL+AA
Sbjct: 528 NDLI-----ISITTKLPEQLDQVV-----------RAEINAPKRRLTENNHSATHLLHAA 571
Query: 659 LRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
LR+VL QK V +D DFS + E ++ + V VE+ +N I + + +
Sbjct: 572 LRQVLGHHVQQKGSLVNADLLRFDFSHF-EKMTAEQVVEVERLVNKKIRENISLKEQRDL 630
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E ++ GE Y D V +I D S+E C G HV TG I + S
Sbjct: 631 PIEQAKEEGAMMLFGEKYSDQVRVITFDDS---YSKELCGGCHVSATGKIGLFKIREESS 687
Query: 778 YNHGVRSIKCLTGDSSK 794
GVR I LT D ++
Sbjct: 688 VAAGVRRIVALTADVAE 704
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F+NSGM QFK+ FLG +P PR+A++QKC+RV GKHNDL GRDSYH T FEM
Sbjct: 33 DPTLMFINSGMAQFKDYFLGNQESPSPRIADTQKCLRVSGKHNDLEDVGRDSYHQTLFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ + +RLY T
Sbjct: 93 LGNWSFGDYFKQEAIDWAWELLTE-RYGIDPERLYIT 128
>gi|323331402|gb|EGA72819.1| Ala1p [Saccharomyces cerevisiae AWRI796]
Length = 648
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 241/699 (34%), Positives = 349/699 (49%), Gaps = 87/699 (12%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-L 64
I + + ++R++FLDYF + + H VKSSP+VP+ D ++ F N+GM Q+K +FLG +
Sbjct: 3 IGDKQKWTATNVRNTFLDYFKSKE-HKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTV 61
Query: 65 TPAP----YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
PA R NSQKC+R GGKHNDL G+DSYHHTFFEMLGNWSF DY+K++A
Sbjct: 62 DPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITY 121
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ LT+ +P DRLY TYF G ++ GL D E R++W +GVP DHI K NFW
Sbjct: 122 SWTLLTEV-YGIPKDRLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFW 180
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EMG GPCG SEIHYD G ++A + VN D D++E+WN+VFI R ++ PL
Sbjct: 181 EMGDQGPCGPCSEIHYDRIGGRNAA-SLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPA 239
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSY 300
+IDTG+GFERLV++LQ+ S YDTD+F PL E I++++ +PY F +++ +DT+Y
Sbjct: 240 KHIDTGMGFERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAY 299
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+L+D+ R +T ALAD P+ + LR ++R + G L+ +
Sbjct: 300 RVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLI 359
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ D++PE+ + IL EE F KT E+
Sbjct: 360 SQVQDIFPELAKDPAFLFEILDEEEASF--------------AKTLDRGER--------- 396
Query: 418 VLGVKYLTKQLARDPSITE---ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
L ++ A S TE + G + LYDTYG ++ + +A + L + FE+
Sbjct: 397 ------LFEKYASAASKTESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEK 450
Query: 475 KLNELKERSKAKAASNVPDI---------DLMDLKHFPVTDDKYKYDYHYDTNSKRYTFP 525
E E SK + D+ +L D K P T+D++KY
Sbjct: 451 AKQESYEASKRGGKKDQSDLIKLNVHELSELNDAK-VPKTNDEFKYG------------- 496
Query: 526 CLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQI 585
N+ G ++ G + E G+I DKT YA GGQ
Sbjct: 497 --SANVEGTIL-------------KLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQE 541
Query: 586 DDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
D G + + + N VE +L + G + H G++ K++ G D R
Sbjct: 542 YDTGKIVIDDAAEFN--VENVQLYN--GFVFHTGSLEEG-KLSVGDKIIASFDELRRFPI 596
Query: 646 MRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFS 683
HT +H+LN AL+ L QK V ++ DFS
Sbjct: 597 KNNHTGTHILNFALKETLGNDVDQKGSLVAPEKLRFDFS 635
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTPAP----YPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG + PA R NSQKCIR GGKHNDL G+D
Sbjct: 36 VPFDDPTLLFANAGMNQYKPIFLGTVDPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKD 95
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + LT+ +P DRLY T+
Sbjct: 96 SYHHTFFEMLGNWSFGDYFKKEAITYSWTLLTE-VYGIPKDRLYVTY 141
>gi|351707970|gb|EHB10889.1| Putative alanyl-tRNA synthetase, mitochondrial [Heterocephalus
glaber]
Length = 947
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 253/787 (32%), Positives = 377/787 (47%), Gaps = 97/787 (12%)
Query: 54 MCQFKNVFLGLTP-----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWS 108
M QFK +FLG A + RVANSQKCVR GG+HNDL GRD HHTFFEMLGNW+
Sbjct: 1 MNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWA 60
Query: 109 FN-DYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPR 167
F +Y+K +AC MA E LT+ +P DRL+ +YFGG + GL D E+RDIWL LGVP
Sbjct: 61 FGGEYFKEEACTMAWELLTRV-YGIPEDRLWVSYFGGDPKAGLDPDLESRDIWLSLGVPS 119
Query: 168 DHIKKEGMKCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISH 227
+H+ G + NFWEMG TGPCG +EIHYD+ G L+E+WN+VF+ H
Sbjct: 120 NHVLSFGPQENFWEMGDTGPCGPCTEIHYDLAG---------GVGAPQLVELWNLVFMQH 170
Query: 228 KRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRT 287
R + ++ PL + ++DTG+G ERLV +LQ + STYDTDLF PL I + GA PY
Sbjct: 171 NREADRSLQPLPQQHVDTGMGLERLVAVLQGRCSTYDTDLFSPLFHAIHQGCGAPPYLGR 230
Query: 288 FTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVK 344
++ DT+YR+++D+ R ++V +AD + P + LR ++R A+ S +V +
Sbjct: 231 VGAADEGHTDTAYRVVADHIRTLSVCIADGVSPGMSGAPLVLRRILRRAVRFSTEVLRAP 290
Query: 345 QGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQ- 403
G L+ L + E LGD YPE+Q + ++ +N E L TQ
Sbjct: 291 PG-LLGSLVPVVVETLGDAYPELQRNSAQV-----------ENPGDGRAVEKGFLQGTQL 338
Query: 404 ----PELEQFNIMEEPGLVL-----GVKYLTKQLARDPSITEISGDMAFTLY--DTYGLS 452
P + E+ L G + + + L R D+A++L GL
Sbjct: 339 HCLLPGQIASLVSEDEAAFLDSLQRGRRIIDRTLKRLGPSDLFPADVAWSLSLSGNLGLP 398
Query: 453 KNIIQ--------ELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPV 504
++++ +L +A L E + + ++ + + + N+ + + +
Sbjct: 399 LDLVELMLEEKGVQLDSAGLAQLVQEEAQLRAHQAEPAQEQRLCLNLHALGELQHRGMTP 458
Query: 505 TDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEH 564
TDD KY Y + PC L Q++ D A+ G
Sbjct: 459 TDDSPKYSYSLQPTGEYEFGPCEAQVL-------QLYTEDGAAVATVGPGQR-------- 503
Query: 565 NAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSS 624
GL+ D+TN YA GGQ D G YL ++ + + G I+H V++S
Sbjct: 504 ---CGLLLDRTNFYAEQGGQASDRG--YLVRAGHQDVLFPVAQAQVWGGFILH--EVLAS 556
Query: 625 FKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQKSCRVFSDECALDFSV 684
+ G ++ VD RLGCM HT +HLL+ ALR+ L + ++ + E L F V
Sbjct: 557 EHLQVGDKVQLHVDKAWRLGCMEKHTATHLLSWALRQTLGPSTEQRGSHLNPEW-LRFDV 615
Query: 685 YGET-LSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPG-----EIYPDD 738
+ L+ + + VE + + + V +E+P L +PG E+YPD
Sbjct: 616 ATQAPLTPEQLRTVEGTVQEAVQQDEAV-----YTAEVP-LVLTACVPGLRSLDEVYPDP 669
Query: 739 V-----------ILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKC 787
V L +S S E CCGTH+ TG + +I G +
Sbjct: 670 VRVVSVGVPVARALDPMSQAALQASVELCCGTHLLRTGAVGDLVIIRESQLTKGTTRLLV 729
Query: 788 LTGDSSK 794
+TG+ ++
Sbjct: 730 ITGEQAQ 736
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 64/94 (68%), Gaps = 7/94 (7%)
Query: 832 MCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEMLGNWS 886
M QFK +FLG A + RVANSQKC+R GG+HNDL GRD HHTFFEMLGNW+
Sbjct: 1 MNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWA 60
Query: 887 F-NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
F +Y+K +AC MA E LT+ +P DRL+ ++
Sbjct: 61 FGGEYFKEEACTMAWELLTR-VYGIPEDRLWVSY 93
>gi|420150220|ref|ZP_14657380.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394752279|gb|EJF35981.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 877
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 247/793 (31%), Positives = 382/793 (48%), Gaps = 104/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FL +F ++GHT+V S+P+V D ++ F N+GM QFK FLG Y R
Sbjct: 1 MTSQEIREQFLKFF-ESKGHTIVPSAPMVVKNDPTLMFTNAGMNQFKEFFLGNAKPKYKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 VADTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTE-IYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F GS++ G+P D+E DIW E + +HI K NFWEMG GPCG
Sbjct: 119 IPKENLYVTVFEGSEEDGVPFDQEAYDIWKER-IAENHILLGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
+EIH D++ E A VN D +IEIWN VF+ R + ++ L +DTG+
Sbjct: 178 TEIHVDIRSEEEKAKVPGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPSRNVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ K S YDTD+F PL+ +E+++ ++ T+ + ++ + R++SD+
Sbjct: 238 GFERLCMVLQKKQSNYDTDVFTPLIHKVEEITQSRYTSGDRVTAEQEQVNIAIRVISDHI 297
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + A+ D P + + + + F ++ + +L ++ +G +P
Sbjct: 298 RAVAFAITDGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLSNQMGGTFP 357
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ I ++ EE F +E+ L+L V
Sbjct: 358 ELEKQQFLIMSVIKEEEASF-----------------------LRTLEQGLLMLDV---- 390
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ ++ ++SG AF LYDTYG K++ + + K LT+ +FE++L + KERS+A
Sbjct: 391 --MIQNSPGKQLSGGKAFELYDTYGFPKDLTALILSEKGLTMDEASFEEQLQKQKERSRA 448
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A D ++ DD + YDT L +V
Sbjct: 449 AAQIKADDWVIL-------RDDDEEEFIGYDT-------------LEAVV---------- 478
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
+++ R + D + L+F+ T Y GGQ+ D G + Y+ +T
Sbjct: 479 RLVKYRRVESQKDGTHFQ------LVFNTTPFYPEGGGQVGDKGTLQSANGELIYILDTK 532
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+EN I+H + + P + EV + R H+ +HLL+
Sbjct: 533 KEN------------NLIIHISEHLPTNLNDP---FKAEVHSISREMAEANHSATHLLHQ 577
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL T QK RV + DFS + + L+ + + VE+ +N I ++ +
Sbjct: 578 ALREVLGTHVEQKGSRVAPETLRFDFSHFAK-LTEEELKKVEQLVNKRIFEKIPLQEHRN 636
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + + GE Y D V +I D S+E C GTHV NTG I +I
Sbjct: 637 IPMQQAVESGAMALFGEKYGDRVRMIQFGD-----SKELCGGTHVKNTGDIWYFKIISEG 691
Query: 777 SYNHGVRSIKCLT 789
+ G+R I+ +T
Sbjct: 692 AVAAGIRRIEAIT 704
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG Y RVA++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEFFLGNAKPKYKRVADTQKCLRVSGKHNDLEEVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGDYFKKEAISWAWELLTE-IYKIPKENLYVT 127
>gi|355764107|gb|EHH62253.1| hypothetical protein EGM_20519 [Macaca fascicularis]
Length = 927
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 214/561 (38%), Positives = 303/561 (54%), Gaps = 64/561 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT + SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYIHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKE-------GMKCNF 179
+ +P+ RLY TYFGG + GL D E + IW LG ++ + MK NF
Sbjct: 124 QE-FGIPIGRLYVTYFGGDEAAGLEPDLECKQIWQNLGYLYSFVRLDDTKILPGNMKDNF 182
Query: 180 WEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLS 239
WEMG TGPCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL
Sbjct: 183 WEMGDTGPCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGILKPLP 241
Query: 240 KNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTS 299
K IDTG+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +
Sbjct: 242 KKSIDTGMGLERLVSVLQNKMSNYDTDLFIPYFEAIQKGTGARPYTGKVGAEDADGIDMA 301
Query: 300 YRMLSDYSRMITVALADNMFPDATA-KLRNVVRDALLISEDVFKVKQGKLVKELSYNIAE 358
YR+L+D++R ITVALAD PD T LR ++R A+ + + +G L + +
Sbjct: 302 YRVLADHARTITVALADGGRPDNTGYVLRRILRRAVRYAHEKLNASRG-FFATLVDVVVQ 360
Query: 359 ILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
LGD +PE++ + ++ I+ EE F +KT L
Sbjct: 361 SLGDAFPELKKDPDMVKDIINEEEVQF--------------LKT--------------LS 392
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ--KL 476
G + L +++ I GD A+ LYDTYG ++ +A K L + + FE+ KL
Sbjct: 393 RGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKL 452
Query: 477 NELKERSKAKAASNVPDIDL-----MDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNL 531
+LK + K ++ +D+ + + VTDD KY+YH D + + F + +
Sbjct: 453 AQLKSQGKGAGGEDLIMLDIYAIEELRARGLEVTDDSPKYNYHLDFSGSKTEFTVKNAQV 512
Query: 532 VG------------IVIGDQV 540
G + +GDQV
Sbjct: 513 RGGYVLHIGTIYGDLKVGDQV 533
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 75/113 (66%), Gaps = 6/113 (5%)
Query: 812 ILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDL 866
I + IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL
Sbjct: 26 IHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDL 85
Query: 867 SFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
G+D YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P+ RLY T+
Sbjct: 86 DDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIGRLYVTY 137
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 15/208 (7%)
Query: 613 GKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQKSCR 672
G ++H G + KV G R+ +D R M HT +H+LN ALR VL QK
Sbjct: 515 GYVLHIGTIYGDLKV--GDQVRLFIDEPRRRPIMSNHTATHILNFALRSVLGEADQKGSL 572
Query: 673 VFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPG 732
V D DF+ G +S + E+ N++I V + + + L +
Sbjct: 573 VAPDRLRFDFTAKG-AMSTQQIKKAEEIANEMIEAAKAVYTQDCPLAAAKAIQGLRAVFD 631
Query: 733 EIYPDDVILIDI------------SDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
E YPD V ++ I ++ S E C GTH+ N+ H + ++ ++
Sbjct: 632 ETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAK 691
Query: 781 GVRSIKCLTGDSSKAAVENGKHLSTAAS 808
G+R I +TG ++ A+ + L + S
Sbjct: 692 GIRRIVAVTGAEAQKALRKAESLKKSLS 719
>gi|83596048|gb|ABC25406.1| alanyl-tRNA synthetase [uncultured marine bacterium Ant39E11]
Length = 868
Score = 368 bits (945), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 246/797 (30%), Positives = 377/797 (47%), Gaps = 115/797 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR +FL++F N +GHT+V S+P+V D S+ FVN+GM FK++F G PA + R
Sbjct: 1 MTASQIRQAFLNFFAN-KGHTIVHSAPLVTKDDSSLMFVNAGMNPFKDIFTGAKPASHSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT
Sbjct: 60 VADSQKCLRVSGKHNDLEEVGIDTYHHTLFEMLGNWSFGDYFKQEAIDWAWELLTD-VYQ 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +RLY T F G GL D+E + WL+ +P D I NFWEMG TGPCG
Sbjct: 119 LDPERLYVTIFEGDKGDGLALDDEAKSHWLK-HLPADRILNGNKSDNFWEMGETGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E VN D +IE+WN+VF+ ++R++ ++V L ++DTG+
Sbjct: 178 SEIHIDLRPEKERKQKDGATLVNMDHPQVIEVWNLVFMQYQRMADGSLVDLPSQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV ++ K+S YDTD+F P ++ +E +SG + YG+ +D + R+++D+
Sbjct: 238 GFERLVRAIEGKSSNYDTDVFAPYIQRLESMSG-RTYGKD------ESVDVAMRVIADHV 290
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R + A+AD P T +R ++R A+ V + K+ + L ++ E +G +
Sbjct: 291 RAVGFAIADGQLPSNTGAGYVIRRILRRAVRYGYSVLQFKE-PFIARLVPDMVENMGKAF 349
Query: 365 PEIQDSINKIQLILGEESRIF-----DNLRK--AAVKEWKPLVKTQPELEQFNIMEEPGL 417
PE++ + ++ EE + F L++ AA+KE KPL+
Sbjct: 350 PELKAQQTLMTQVIEEEEQAFLRTLASGLKRLDAAMKEGKPLM----------------- 392
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
G F LYDTYG ++ + K + L + F + +
Sbjct: 393 ---------------------GKQCFELYDTYGFPLDLTALICKEKGIVLDEKGFHEAMA 431
Query: 478 ELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
E K RSK A V D ++ P D++ Y T SK + +
Sbjct: 432 EQKGRSKVAGAQKVGDW----VEVAPGIGDQFVGYDQYTTESKLLRYRKV---------- 477
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
S A D Q ++ T Y GGQ+ D G +
Sbjct: 478 ---------------SNAKGDFTQ--------VVIQPTPFYPEGGGQVGDRGWLIMGKD- 513
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
++E+ +S G I+H +V+ P + +D R + H+ +HLL+
Sbjct: 514 ----RIEVLNCSSEAGAILH---LVAIMPAKPTAAVKAVIDEGKRKASAQNHSATHLLHK 566
Query: 658 ALRRVLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR +L ++ SDE DFS + + ++ + A+E +++ I +
Sbjct: 567 ALRDILGVHVEQRGSFVSDEYLRFDFSHF-QRIAAKELMAIESHVSTAILQDHPLQEFRE 625
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
E + GE Y D V +I + D S E C GTHV T + ++
Sbjct: 626 STMEEAKAKGAMALFGEKYGDSVRVIQLGD-----SVELCGGTHVSTTAALSPFVIVSES 680
Query: 777 SYNHGVRSIKCLTGDSS 793
S G+R I+ L G S+
Sbjct: 681 SVAAGIRRIEALAGHSA 697
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D S+ FVN+GM FK++F G PA + RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DSSLMFVNAGMNPFKDIFTGAKPASHSRVADSQKCLRVSGKHNDLEEVGIDTYHHTLFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
LGNWSF DY+K++A A E LT L +RLY T
Sbjct: 92 LGNWSFGDYFKQEAIDWAWELLTD-VYQLDPERLYVTI 128
>gi|341889010|gb|EGT44945.1| hypothetical protein CAEBREN_14908 [Caenorhabditis brenneri]
Length = 794
Score = 368 bits (945), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 252/797 (31%), Positives = 403/797 (50%), Gaps = 88/797 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDD-SIAFVNSGMCQFKNVFLGLTPAPYPRVANS 75
+R SF ++F ++ H ++KS+ ++P +D S+ F N+GM QFK L T RVAN
Sbjct: 26 LRKSFYNFF-KSKDHEILKSTSVIPNENDVSLLFTNAGMNQFKPQILSSTEPK--RVANI 82
Query: 76 QKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYY-KRDACRMALEFLTKPPVSLPL 134
QKC+R GGKHNDL G+D +H TFFEM+GNWSFND + K +ACR A E+L + +
Sbjct: 83 QKCIRAGGKHNDLDDVGKDLHHQTFFEMMGNWSFNDAFSKEEACRFAWEYLV-DTLGIDD 141
Query: 135 DRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEI 194
DRLY +YF G + GL D E R+IW ++GVP + I + NFWEMGS GPCG +EI
Sbjct: 142 DRLYVSYFAGIECLGLLEDHECREIWKKIGVPPERILP-FVAENFWEMGSVGPCGPCTEI 200
Query: 195 HYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVT 254
HYD G ++A + VN D + ++EIWNIVF+S+ R S+ I L KN+IDTG+GFERL++
Sbjct: 201 HYDQIGGRNAA-SLVNVD-DSVVEIWNIVFMSNVRDSSGKIHQLGKNHIDTGMGFERLLS 258
Query: 255 ILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVAL 314
++QNK S ++TD+F+PL+ I ++G G + S ++ D +R+++D+ R +TVA+
Sbjct: 259 VVQNKNSNFETDVFMPLMNKISSLTGR---GLKYNGSLKSREDAVFRLVADHVRAVTVAI 315
Query: 315 ADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSI 371
+D + PD T + +R ++R + L + + L +L + + +VYPE++ S
Sbjct: 316 SDGVTPDGTGRGFIVRKMMRRSFLQGNSKLGIDRFAL-SDLVPTVISTMKEVYPEMETSS 374
Query: 372 NKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARD 431
+ I + EE F WK + K K + L+ +
Sbjct: 375 DNIIRLFKEEEAQF----------WKTVDKA-------------------KKMFDSLSTE 405
Query: 432 PSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNV 491
+ SG AF L++TYGL ++ ELA + + FE+ E ++ S+ + +
Sbjct: 406 SRSSVFSGRKAFNLFETYGLPLSVTIELARNIGKEVDEKEFEKCQLEAQKLSRNASQFKL 465
Query: 492 PDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHA 551
P + FP DK KY Y + + +Y FP ++T ++ QV+ ++A
Sbjct: 466 P----ISAGEFPTHSDKEKYSYGF--KAGKYEFPQVETRIL------QVYKNQENA---- 509
Query: 552 RSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT----QENGKVEIGE 607
D LE N ++ + Y GGQ D+G + N + K+E G
Sbjct: 510 ------DC--LEENEKGAVLLENCQFYGEQGGQNSDVGTLLIDNKVVFEVESAKKLENGA 561
Query: 608 LASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTY 667
+ L G+ H ++ L R ++D + R G M+AH+ +HLLN AL++
Sbjct: 562 VTVLFGRAFH--------RIHKDLRVRQQLDEKRREGVMKAHSATHLLNWALQKSGLGYG 613
Query: 668 QKSCRVFSDECALDFSVYGETLSVDSVAAV----EKYINDVI--ANQVQVDRRHMRASEL 721
QK V + D+ E + D + EK +N+ I + V+ + ++
Sbjct: 614 QKGSSVDCNRLRFDYLTSEEVVEKDQKTEILKQCEKEMNEFIRVGGETIVNETTIEGAKN 673
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
+ I V ++ + +V E C GTHV N + ++ KS H
Sbjct: 674 IENLQSDIKEDRIGESSVRVVSLGTGSDV-PVECCSGTHVHNINMVSEIAILSDKSMGHR 732
Query: 782 VRSIKCLTGDSSKAAVE 798
+R I +TG+ +++ E
Sbjct: 733 LRRIIAVTGEEAQSCRE 749
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 68/104 (65%), Gaps = 5/104 (4%)
Query: 818 IPYGDD-SIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHH 876
IP +D S+ F N+GM QFK L T RVAN QKCIR GGKHNDL G+D +H
Sbjct: 48 IPNENDVSLLFTNAGMNQFKPQILSSTEPK--RVANIQKCIRAGGKHNDLDDVGKDLHHQ 105
Query: 877 TFFEMLGNWSFNDYY-KRDACRMALEFLTKPPVSLPLDRLYFTF 919
TFFEM+GNWSFND + K +ACR A E+L + + DRLY ++
Sbjct: 106 TFFEMMGNWSFNDAFSKEEACRFAWEYLV-DTLGIDDDRLYVSY 148
>gi|189463200|ref|ZP_03011985.1| hypothetical protein BACCOP_03913 [Bacteroides coprocola DSM 17136]
gi|189430179|gb|EDU99163.1| alanine--tRNA ligase [Bacteroides coprocola DSM 17136]
Length = 872
Score = 368 bits (945), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 265/790 (33%), Positives = 379/790 (47%), Gaps = 103/790 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR SF+ +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTANEIRDSFVKFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V +SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L
Sbjct: 61 VTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAYEYLVSVLKL 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D LY T F GS G+ D+E W + P DHI NFWEMG TGPCG
Sbjct: 121 DPKD-LYVTVFEGSPSEGISRDDEAAGYWGQF-FPEDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKG--EPSSALAR--VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D + E ++ R VN D +IEIWN+VF+ + R + T+ PL IDTG+
Sbjct: 179 SEIHIDSRSAEEKAAVPGRELVNKDHPQVIEIWNLVFMQYNRKADGTLEPLPAKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV LQ KTS YDTD+F P+++ I +SG K YG + +D + R+++D+
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPIIKAIGDLSGKK-YG------DDEKVDVTMRVVADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++ D P A +R ++R A+ + KQ + K L I E +G Y
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYAYTFLGQKQAFMYKLLPVLI-ENMGGAY 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ I+ ++ EE F LR L G++ L
Sbjct: 351 PELKAQQALIEKVMKEEEESF--LRT--------------------------LETGIRLL 382
Query: 425 TKQLARDPSI--TEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
K +A + TEISG AFTLYDT+G ++ + + LT + FE ++ + KER
Sbjct: 383 DKTMAETKAAGKTEISGVDAFTLYDTFGFPFDLTELILRENGLTADVKGFEAEMQKQKER 442
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
++ AA V D + LK T Y Y Y+T+ RY
Sbjct: 443 ARNAAA--VETGDWVTLKEGETTFVGYDYT-EYETSILRYR------------------- 480
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
I+ ++ ++ T YA +GGQI D GV E
Sbjct: 481 ----------------QIKQKNQTLYQIVLSDTPFYAESGGQIGDTGV-----LVSEFET 519
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
++I + +H + P + VD R C H+ +HLL+ ALR+V
Sbjct: 520 IDIIDTKKENNLPIHIAKKLPEHLEAPMMAC---VDTDKRAACAANHSCTHLLDEALRQV 576
Query: 663 LTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRHMRASE 720
L QK V D DFS + + ++ + + VE +N I V + + R++ +
Sbjct: 577 LGAHVEQKGSLVTPDSLRFDFSHF-QKVTPEQIREVEHLVNAKIRENVPLTEYRNLPIEK 635
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
L + + GE Y D+V ++ S E C GTHV TG I +I S
Sbjct: 636 AKELGAIALF-GEKYGDEVRVVQFGS-----SIEFCGGTHVSATGKIGMVKIISESSVAA 689
Query: 781 GVRSIKCLTG 790
G+R I+ +TG
Sbjct: 690 GIRRIEAVTG 699
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 61/82 (74%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RV +SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAYEYL 114
>gi|393778864|ref|ZP_10367125.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392611433|gb|EIW94172.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 877
Score = 368 bits (944), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 247/793 (31%), Positives = 382/793 (48%), Gaps = 104/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FL +F ++GHT+V S+P+V D ++ F N+GM QFK FLG Y R
Sbjct: 1 MTSQEIREQFLKFF-ESKGHTIVPSAPMVVKNDPTLMFTNAGMNQFKEFFLGNAKPKYKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 VADTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTE-IYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F GS++ G+P D+E DIW E + +HI K NFWEMG GPCG
Sbjct: 119 IPKENLYVTVFEGSEEEGVPFDQEAYDIWKER-IAENHILLGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
+EIH D++ + A VN D +IEIWN VF+ R + ++ L +DTG+
Sbjct: 178 TEIHVDIRSDEEKAKVPGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPSRNVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ K S YDTD+F PL+ +E+++ ++ T+ + ++ + R++SD+
Sbjct: 238 GFERLCMVLQKKQSNYDTDVFTPLIHKVEEITQSRYTSGDRVTAEQEQVNIAIRVISDHI 297
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + A+ D P + + + + F ++ + +L ++ +G +P
Sbjct: 298 RAVAFAITDGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLSNQMGGTFP 357
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ I ++ EE F +E+ L+L V
Sbjct: 358 ELEKQQFLIMSVIKEEEASF-----------------------LRTLEQGLLMLDV---- 390
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ ++ ++SG AF LYDTYG K++ + + K LT+ +FE++L + KERS+A
Sbjct: 391 --MIQNSPGKQLSGGKAFELYDTYGFPKDLTALILSEKGLTMDEASFEEQLQKQKERSRA 448
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A D ++ DD + YDT L +V
Sbjct: 449 AAQIKADDWVIL-------RDDDEEEFIGYDT-------------LEAVV---------- 478
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
+++ R + D + L+F+ T Y GGQI D G + Y+ +T
Sbjct: 479 RLVKYRRVESQKDGTHFQ------LVFNTTPFYPEGGGQIGDKGTLQSANGELIYILDTK 532
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+EN I+H + + P + EV + R H+ +HLL+
Sbjct: 533 KEN------------NLIIHISEHLPTNLNDP---FKAEVHSISREMAEANHSATHLLHQ 577
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL T QK RV + DFS + + L+ + + VE+ +N I ++ +
Sbjct: 578 ALREVLGTHVEQKGSRVAPETLRFDFSHFAK-LTEEELKKVEQLVNRRIFEKIPLQEHRN 636
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + + GE Y D V +I D S+E C GTHV NTG I +I
Sbjct: 637 IHMQQAVESGAMALFGEKYGDRVRMIQFGD-----SKELCGGTHVKNTGDIWYFKIISEG 691
Query: 777 SYNHGVRSIKCLT 789
+ G+R I+ +T
Sbjct: 692 AVAAGIRRIEAIT 704
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG Y RVA++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEFFLGNAKPKYKRVADTQKCLRVSGKHNDLEEVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGDYFKKEAISWAWELLTE-IYKIPKENLYVT 127
>gi|402830906|ref|ZP_10879600.1| alanine--tRNA ligase [Capnocytophaga sp. CM59]
gi|402283340|gb|EJU31858.1| alanine--tRNA ligase [Capnocytophaga sp. CM59]
Length = 877
Score = 368 bits (944), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 250/798 (31%), Positives = 377/798 (47%), Gaps = 114/798 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FL +F ++GHT+V S+P+V D ++ F N+GM QFK FLG Y R
Sbjct: 1 MTSQEIRELFLKFF-ESKGHTIVPSAPMVIKNDPTLMFTNAGMNQFKEFFLGNAKPKYKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V ++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+KR+A A E LT+
Sbjct: 60 VVDTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKREAISWAWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F GS + G+P D+E DIW E + DHI K NFWEMG GPCG
Sbjct: 119 IPKENLYVTVFEGSPEEGVPFDQEAYDIWKER-IAEDHILLGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E A VN D +IEIWN VF+ R + ++ L +DTG+
Sbjct: 178 SEIHVDIRSEEEKAKVAGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPAQNVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ K S YDTD+F PL+ +E+++ K T + ++ + R++SD+
Sbjct: 238 GFERLCMVLQGKQSNYDTDVFTPLIHKVEEITKTKYTNGIKVTPEQEQINVAIRVISDHI 297
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + A+AD P + + + + F ++ + +L +A+ +G +
Sbjct: 298 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLGQKEPFIYKLVETLAKQMGGTFH 357
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ I ++ EE F +E+ L+L V
Sbjct: 358 ELEKEFLLIVSVIKEEEASF-----------------------LRTLEQGLLMLDV---- 390
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ ++ + ++SG AF LYDTYG K++ + + + +TL +FE+ L + KERS+A
Sbjct: 391 --MIQNTTDKQLSGSKAFELYDTYGFPKDLTALILSERGMTLDEASFEEHLQKQKERSRA 448
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A D ++ DD+ + YDT L +V
Sbjct: 449 AAQVKAGDWVVL-------RDDEEEEFVGYDT-------------LEAVV---------- 478
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
+++ + + D + L+F+ T Y GGQ+ D G + Y+ +T
Sbjct: 479 RLVKYRKVESQKDGTLYQ------LVFNTTPFYPEGGGQVGDRGTLQSANGEIIYIIDTK 532
Query: 598 QENGKVEIGELASLEGKIVHFG-----NVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+EN I+H N+ FK L R A H+ +
Sbjct: 533 KEN------------NLIIHLAEHLPENLTDPFKAEVHLAGRTLAQAN--------HSAT 572
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL+ ALR VL T QK V + DFS + + L+ + + VE+ +N I ++ +
Sbjct: 573 HLLHQALREVLGTHVEQKGSHVSPEALRFDFSHFAK-LTQEELTEVERLVNKRIYEKIPL 631
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
+ + GE Y D V +I + SRE C GTHV NTG I
Sbjct: 632 QEHRNIPIQQALEAGAMALFGEKYGDKVRMIQFGE-----SRELCGGTHVKNTGDIWFFK 686
Query: 772 VIGYKSYNHGVRSIKCLT 789
++ + GVR I+ +T
Sbjct: 687 IVSEGAVAAGVRRIEAIT 704
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG Y RV ++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEFFLGNAKPKYKRVVDTQKCLRVSGKHNDLEEVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+KR+A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGDYFKREAISWAWELLTE-VYKIPKENLYVT 127
>gi|429755696|ref|ZP_19288332.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429173332|gb|EKY14861.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 877
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 246/793 (31%), Positives = 382/793 (48%), Gaps = 104/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FL +F ++GHT+V S+P+V D ++ F N+GM QFK FLG Y R
Sbjct: 1 MTSQEIREQFLKFF-ESKGHTIVPSAPMVVKNDPTLMFTNAGMNQFKEFFLGNAKPKYKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 VADTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTE-IYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F GS++ G+P D+E DIW E + +HI K NFWEMG GPCG
Sbjct: 119 IPKENLYVTVFEGSEEDGVPFDQEAYDIWKER-IAENHILLGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
+EIH D++ + A VN D +IEIWN VF+ R + ++ L +DTG+
Sbjct: 178 TEIHVDIRSDEEKAKVPGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPSRNVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ K S YDTD+F PL+ +E+++ ++ T + +++ + R++SD+
Sbjct: 238 GFERLCMVLQKKQSNYDTDVFTPLIHKVEEITQSRYTSGDRVTPEQEEVNIAIRVISDHI 297
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + A+ D P + + + + F ++ + +L ++ +G +P
Sbjct: 298 RAVAFAITDGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLSNQMGGTFP 357
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ I ++ EE F +E+ L+L V
Sbjct: 358 ELEKQQFLIMSVIKEEEASF-----------------------LRTLEQGLLMLDV---- 390
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ ++ ++SG AF LYDTYG K++ + + K LT+ +FE++L + KERS+A
Sbjct: 391 --MIQNSPGKQLSGGKAFELYDTYGFPKDLTALILSEKGLTMDEASFEEQLQKQKERSRA 448
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A D ++ DD + YDT L +V
Sbjct: 449 AAQIKADDWVIL-------RDDDEEEFIGYDT-------------LEAVV---------- 478
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
+++ R + D + L+F+ T Y GGQ+ D G + Y+ +T
Sbjct: 479 RLVKYRRVESQKDGTHFQ------LVFNTTPFYPEGGGQVGDKGTLQSANGELIYILDTK 532
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+EN I+H + + P + EV + R H+ +HLL+
Sbjct: 533 KEN------------NLIIHISEHLPTNLNDP---FKAEVHSISREMAEANHSATHLLHQ 577
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL T QK RV + DFS + + L+ + + VE+ +N I ++ +
Sbjct: 578 ALREVLGTHVEQKGSRVAPETLRFDFSHFAK-LTEEELKKVEQLVNKRIFEKIPLQEHRN 636
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + + GE Y D V +I D S+E C GTHV NTG I +I
Sbjct: 637 IPMQQAVESGAMALFGEKYGDRVRMIQFGD-----SKELCGGTHVKNTGDIWYFKIISEG 691
Query: 777 SYNHGVRSIKCLT 789
+ G+R I+ +T
Sbjct: 692 AVAAGIRRIEAIT 704
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG Y RVA++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEFFLGNAKPKYKRVADTQKCLRVSGKHNDLEEVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGDYFKKEAISWAWELLTE-IYKIPKENLYVT 127
>gi|379730911|ref|YP_005323107.1| alanyl-tRNA synthetase [Saprospira grandis str. Lewin]
gi|378576522|gb|AFC25523.1| alanyl-tRNA synthetase [Saprospira grandis str. Lewin]
Length = 875
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 258/797 (32%), Positives = 383/797 (48%), Gaps = 110/797 (13%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+K+IR FLD+F ++GH +V S+P+V D ++ F+NSGM QFK+ FLG +P PR+
Sbjct: 3 TAKAIRQEFLDFF-ESKGHQIVASAPVVNQNDPTLMFINSGMAQFKDYFLGNQESPSPRI 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSL 132
A++QKC+RV GKHNDL GRDSYH T FEMLGNWSF DY+K++A A E LT+ +
Sbjct: 62 ADTQKCLRVSGKHNDLEDVGRDSYHQTLFEMLGNWSFGDYFKQEAIDWAWELLTE-RYGI 120
Query: 133 PLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSS 192
+RLY T F G + LP DEE +W E VP+D I + K NFWEMG GPCG +
Sbjct: 121 DPERLYITVFAGDEADNLPADEEAEKMW-EKWVPKDRILRFDRKDNFWEMGDQGPCGPCA 179
Query: 193 EIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
EIH D++ E A VN D +IEIWN+VF+ R++ +VPL +IDTG+G
Sbjct: 180 EIHIDLRSEEERAAKDGKELVNMDDPMVIEIWNLVFMQFNRMADGKLVPLKNKHIDTGMG 239
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
ERL +LQNKTS Y TDLF P++E IE +SG + Y ++ +D+ + R+++D+ R
Sbjct: 240 LERLCMVLQNKTSNYTTDLFSPIIEKIEALSGFE-YKDDYSPKALSDI--AMRVIADHVR 296
Query: 309 MITVALADNMFPDATAKLRNVVRDALLISEDVFKV--KQGKLVKELSYNIAEILGDVYPE 366
+ + +AD P T V R F +Q ++ L ++E+ +V+PE
Sbjct: 297 AVALVIADGQLPSNTGAGYVVRRVLRRAVRYYFSFLNRQDPMIHLLVPVVSEMFKEVFPE 356
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ + I ++ E F + L +EQ +
Sbjct: 357 LAAQEDFICKMVKSEEEAF----------LRTLANGLKRIEQLEVKN------------- 393
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
E+ G+ AF L+DT+G ++ +A K T+ + FE L E K+RS+A
Sbjct: 394 --------NELPGETAFELFDTFGFPIDLSLLIAKEKGWTVDLKGFEAALAEQKKRSQAD 445
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
AA +V D +++ T+ VG ++ C +
Sbjct: 446 AAKDVADWVILEEGQ---------------------------TDFVGY---EKDSC--QS 473
Query: 547 AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY-------LTNTTQE 599
+ R Q + L+ ++T Y GGQ+ D G+ + + NT +E
Sbjct: 474 RLLKYRKVVVKKKTQYQ------LVLEQTPFYPEGGGQVGDTGLLFFGEEKIPVINTLKE 527
Query: 600 NGKVEIGELASLEGKI-VHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
N + S+ K+ VV R E++A R H+ +HLL+AA
Sbjct: 528 NDLI-----ISITTKLPEQLDQVV-----------RAEINAPKRRLTENNHSATHLLHAA 571
Query: 659 LRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
LR+VL QK V +D DFS + E ++ + V VE+ +N I + + +
Sbjct: 572 LRQVLGHHVQQKGSLVNADLLRFDFSHF-EKMTAEQVVEVERLVNKKIRENISLKEQRDL 630
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E ++ GE Y D V +I D S+E C G HV TG I + S
Sbjct: 631 PIEQAKEEGAMMLFGEKYSDQVRVITFDDS---YSKELCGGCHVSATGKIGLFKIREESS 687
Query: 778 YNHGVRSIKCLTGDSSK 794
GVR I LT D ++
Sbjct: 688 VAAGVRRIVALTADVAE 704
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F+NSGM QFK+ FLG +P PR+A++QKC+RV GKHNDL GRDSYH T FEM
Sbjct: 33 DPTLMFINSGMAQFKDYFLGNQESPSPRIADTQKCLRVSGKHNDLEDVGRDSYHQTLFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ + +RLY T
Sbjct: 93 LGNWSFGDYFKQEAIDWAWELLTE-RYGIDPERLYIT 128
>gi|332666616|ref|YP_004449404.1| alanyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
gi|332335430|gb|AEE52531.1| alanyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
Length = 876
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 247/794 (31%), Positives = 379/794 (47%), Gaps = 95/794 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ ++ IR +FLD+F ++ H +V S+P+V GD ++ F N+GM QFK+ FLG R
Sbjct: 2 MTAREIRQAFLDFFA-SKAHKIVPSAPLVNKGDPTLMFTNAGMNQFKDYFLGNQTPDVRR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D HHT FEMLGNWSF DY+K +A + E LT +
Sbjct: 61 IADTQKCLRVSGKHNDLEDVGYDGTHHTMFEMLGNWSFGDYFKEEAITWSWELLTD-VLG 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY T F G +P D+E +WL +P++HI K NFWEMG TGPCG
Sbjct: 120 LAKDRLYATVFEGDPAANIPPDDEALSLWLRF-LPQEHILYGNKKDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
+EIH+D + + A VN D + ++EIWN VFI R + ++ PL + ++DTG+
Sbjct: 179 TEIHFDTRSDEERAKNPGRDLVNVDNSGVVEIWNNVFIQFNRKADKSLEPLPEQHVDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ K +TYDTD+F P ++ IEKVSG K TF+ D + R++SD+
Sbjct: 239 GFERLCMVLQEKKATYDTDIFSPFIQYIEKVSGKK---YTFSYERSAKSDIAMRVISDHI 295
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I +AD P + +R ++R A+ +KQ + L +A+ +
Sbjct: 296 RAIAFTIADGQLPGNSGAGYVIRRILRRAVRYYYSFLDIKQ-PFLHTLIPMLADAFSGAF 354
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ ++ I+ E F N + +K + L
Sbjct: 355 PELKAQQAQVARIIESEETAFLNTLEKGLKRFDAL------------------------- 389
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
D S +I G+ AF LYDT+G ++ Q LA + + FE L + KERS+
Sbjct: 390 ------DTSSGQIKGEDAFDLYDTFGFPIDLTQLLAQEANIPVDMVGFEAALQKQKERSR 443
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
A AA V D V D + K++ YDT ++
Sbjct: 444 ADAAKVVGD-------WLSVNDGEVKFE-GYDT-----------------------LMVE 472
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
+ R ++++++ L+ T YA +GGQ+ D G YL ++
Sbjct: 473 ATKVLKYR------TVKVKNQDQYQLVLQATPFYAESGGQVGDKG--YLVIGAD---RIN 521
Query: 605 IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL- 663
+ + I+H +V F L + VDA MR H+ +HL++AAL ++L
Sbjct: 522 VLDTQKENDLIIH---IVDEFPSNLSLPVKAVVDAEMREAVSANHSATHLMHAALHQILG 578
Query: 664 TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPF 723
QK V S DF+ Y + + + +E +N+ I + ++ E
Sbjct: 579 QHATQKGQNVDSQRLRFDFNHYQKVTDAE-LRQIEDLVNEKIRANIPLEENRNMPIEEAR 637
Query: 724 LTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVR 783
+ ++ GE Y + V +I SRE C GTH+ TG I ++ + G+R
Sbjct: 638 DSGAMMLFGEKYGEVVRMITFDPS---FSRELCGGTHIQATGQIGLFKILAEGAVAAGIR 694
Query: 784 SIKCLTGDSSKAAV 797
I+ +T ++A V
Sbjct: 695 RIEAITATQAEAFV 708
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 67/109 (61%), Gaps = 5/109 (4%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK+ FLG R+A++QKC+RV GKHNDL G D HHT FE
Sbjct: 32 GDPTLMFTNAGMNQFKDYFLGNQTPDVRRIADTQKCLRVSGKHNDLEDVGYDGTHHTMFE 91
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF----PMVMIP 925
MLGNWSF DY+K +A + E LT + L DRLY T P IP
Sbjct: 92 MLGNWSFGDYFKEEAITWSWELLTD-VLGLAKDRLYATVFEGDPAANIP 139
>gi|373457376|ref|ZP_09549143.1| alanyl-tRNA synthetase [Caldithrix abyssi DSM 13497]
gi|371719040|gb|EHO40811.1| alanyl-tRNA synthetase [Caldithrix abyssi DSM 13497]
Length = 870
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 256/804 (31%), Positives = 392/804 (48%), Gaps = 109/804 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR F+D+F ++GHT V S+P++P D ++ F N+GM QFK++FLG Y R
Sbjct: 1 MTANEIRQQFIDFFI-SKGHTFVPSAPVIPQDDPTLLFTNAGMNQFKDIFLGKGKREYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+RV GKHNDL GRD+YHHTFFEMLGNWSF DYYK++A + A E LT+
Sbjct: 60 AVNSQKCIRVSGKHNDLEEVGRDTYHHTFFEMLGNWSFGDYYKKEAIQWAWELLTE-VWK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L+ T D+E ++W + + I K G K NFWEMG GPCG
Sbjct: 119 LPKEKLFATVH--------HTDDEAAELWKSVTDIAPQRILKFGDKDNFWEMGPVGPCGP 170
Query: 191 SSEIHY-------DMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYI 243
SEIH D+KG+ + VN D IE+WN+VFI R T+ PL ++
Sbjct: 171 CSEIHIDLGEEFCDLKGQEHT--CGVNGDCGRYIELWNLVFIQFNRDENGTLHPLPARHV 228
Query: 244 DTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRML 303
DTG GFERLV +LQ KTS YDTD+F+P+LE I K+ G ++D ++R++
Sbjct: 229 DTGAGFERLVAVLQGKTSNYDTDVFMPILEAIGKMVG--------QDYRQSDEQMAFRVI 280
Query: 304 SDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL 360
+D+ RM+T ++AD P + +R ++R A ++ +++ + K L + +++
Sbjct: 281 ADHIRMLTFSIADGGMPSNEGRGYVMRRILRRAARYGRNL-NMREPFMYK-LVPTVVQMM 338
Query: 361 GDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
GDVYPEI++ I ++ + E E+FN+ + GL +
Sbjct: 339 GDVYPEIRERQEHIMAVI------------------------RAEEERFNLTLDRGLEIF 374
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
K +R ++ I G F LYDT+G ++ + LA LTL FE+ +
Sbjct: 375 EKIKEDLKSRGEAV--IPGYEVFRLYDTFGFPVDLTRILAEENGLTLDMAGFEEHME--A 430
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
+R A+ +S F +T+ + ++ + R+ +G
Sbjct: 431 QRKLARESSK-----------FVMTEGEQQWIVLNEGADSRF-------------VGYDE 466
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
I+ H +R+ S + +I +T YA +GGQ+ D G EN
Sbjct: 467 LAIETHIMRYRLSEKHLQ-----------VILKETPFYAESGGQVGDKGT-----IKGEN 510
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
+++ + IVHF V+ FK EV + R + HT +HLL+AALR
Sbjct: 511 FTLKVLDTKKEGDHIVHFCEPVTDFKPASD-KVLAEVTSSERRSTQKNHTATHLLHAALR 569
Query: 661 RVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
+VL Q V + DF+ Y + LS + + +E+ +N I + + + + S
Sbjct: 570 KVLGAHVTQAGSLVEPNRLRFDFNHY-DRLSEEQIREIERIVNRKIQQNIPLQIAYEKFS 628
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
E + + GE Y D V I I D S E C GTHV TG I ++
Sbjct: 629 EAKKKGAMALF-GEKYGDLVRTIKIDD----FSFELCGGTHVKATGEIGVFIILYEAGIA 683
Query: 780 HGVRSIKCLTGDSSKAAVENGKHL 803
G+R I+ LTG+ + ++ K +
Sbjct: 684 AGIRRIEALTGEKAVEYIQQKKQI 707
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK++FLG Y R NSQKCIRV GKHNDL GRD+YHHT
Sbjct: 28 IPQDDPTLLFTNAGMNQFKDIFLGKGKREYTRAVNSQKCIRVSGKHNDLEEVGRDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK++A + A E LT+ LP ++L+ T
Sbjct: 88 FFEMLGNWSFGDYYKKEAIQWAWELLTE-VWKLPKEKLFAT 127
>gi|397689734|ref|YP_006526988.1| alanyl-tRNA synthetase [Melioribacter roseus P3M]
gi|395811226|gb|AFN73975.1| alanyl-tRNA synthetase [Melioribacter roseus P3M]
Length = 871
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 256/792 (32%), Positives = 387/792 (48%), Gaps = 100/792 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR FLD+F +GH +V S+P++P+GD ++ F N+GM QFK+VFLG Y R
Sbjct: 1 MTSNQIRQQFLDFFAE-RGHKIVPSAPVIPHGDPTLLFTNAGMNQFKDVFLGTGSREYKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A++QKC+RV GKHNDL G D+YHHTFFEMLGNWSF DYYK++A A E LT+
Sbjct: 60 AADTQKCIRVSGKHNDLEEVGHDTYHHTFFEMLGNWSFGDYYKKEAIAWAWELLTEV-WK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RL+ T + D+E W E + +HI K K NFWEMG TGPCG
Sbjct: 119 LPKERLWATVY--------RTDDEAFQYWKSETDINPNHILKFDEKDNFWEMGETGPCGP 170
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIH ++ + + + VNA IEIWN+VFI + R + L ++DTG+GFE
Sbjct: 171 CSEIHINLSDDYDNPML-VNAGSPLCIEIWNLVFIQYHRDETGKLNELPARHVDTGMGFE 229
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTD---LDTSYRMLSDYS 307
R+ +LQ K S YDTD+F P++ IE +SG K Y ++++ ++ + R+++D+
Sbjct: 230 RITAVLQGKKSNYDTDIFTPIISAIENLSGYK-YDYALPAEDKSEQGVVNIAMRVIADHI 288
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R +T A+AD P + LR ++R A + +K+ L K + + + V+
Sbjct: 289 RTLTFAIADGAIPGNDGRGYVLRRILRRASRYGRKL-NLKEPFLFK-IVDTVVKNFSHVF 346
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI+++ N I+ I+ E E FN+ + GL L +
Sbjct: 347 PEIKENQNNIERIINAEE------------------------ESFNVTLDRGLELFDSLI 382
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
K + ++ I G F LYDTYG ++ +A + T+ + F + + E K R++
Sbjct: 383 EKLQSEKKTV--IPGSEVFKLYDTYGFPVDLTNVMAREQGFTIDEDGFNKLMAEQKARAR 440
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTF-PCLDTNLVGIVIGDQVFCI 543
A LK+ + D +TF T G D++
Sbjct: 441 KSARDKST---ATSLKNDSIED---------------FTFVEKAPTQFTGY---DEL--- 476
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
+S A I ++ E + L+ D + Y AGGQ+ D G + K+
Sbjct: 477 --------KSEAKIIGLK-EDGDNILLVLDNSPFYVEAGGQVSDTGFIIIDGI-----KL 522
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
+ +A L+ IVH N FK+ PG+ V+VD + R MR H+ +H L+ ALR +L
Sbjct: 523 PVVNVAKLDNMIVHVVNKSDEFKLEPGMNVTVQVDEKRRWDIMRNHSATHFLHKALREIL 582
Query: 664 TCTYQKS-CRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV----DRRHMRA 718
Q+S V D DFS + E S + +E IN+ + + + D +A
Sbjct: 583 GTHVQQSGSYVGPDRLRFDFSHF-EKPSRQQLEQIESLINEKLRENLPLIHHRDIPFEQA 641
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
E+ L G+ Y ++V ++ D + E C GTHV N+ I +I S
Sbjct: 642 KEMGALMFF----GDKYGENVNVVQFGD----YTMEFCGGTHVKNSSQIGLFKIISESSI 693
Query: 779 NHGVRSIKCLTG 790
GVR I+ +TG
Sbjct: 694 ASGVRRIEAVTG 705
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP+GD ++ F N+GM QFK+VFLG Y R A++QKCIRV GKHNDL G D+YHHT
Sbjct: 28 IPHGDPTLLFTNAGMNQFKDVFLGTGSREYKRAADTQKCIRVSGKHNDLEEVGHDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK++A A E LT+ LP +RL+ T
Sbjct: 88 FFEMLGNWSFGDYYKKEAIAWAWELLTE-VWKLPKERLWAT 127
>gi|15606507|ref|NP_213887.1| alanyl-tRNA synthetase [Aquifex aeolicus VF5]
gi|6226165|sp|O67323.1|SYA_AQUAE RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|2983727|gb|AAC07289.1| alanyl-tRNA synthetase [Aquifex aeolicus VF5]
Length = 867
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 276/827 (33%), Positives = 403/827 (48%), Gaps = 130/827 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR FL +F +GHT VKS+P+VP D ++ FVN+GM FKNVFLGL PY R
Sbjct: 3 LSAHEIRELFLSFF-EKKGHTRVKSAPLVPENDPTLLFVNAGMVPFKNVFLGLEKRPYKR 61
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ QKC+RV GKHNDL G S HHTFFEMLGN+SF DY+K++A A EF+T+ +
Sbjct: 62 ATSCQKCLRVSGKHNDLEQVGYTSRHHTFFEMLGNFSFGDYFKKEAIEYAWEFVTE-VLK 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLE-LGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++LY + + DEE IW E +G+P + I + G + NFW+MG GPCG
Sbjct: 121 LPKEKLYVSVY--------KDDEEAYRIWNEHIGIPSERIWRLGEEDNFWQMGDVGPCGP 172
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SSEI+ D +GE R +EIWN+VF+ + R + PL IDTG+G E
Sbjct: 173 SSEIYVD-RGEEYEGDER-------YLEIWNLVFMQYNRDENGVLTPLPHPNIDTGMGLE 224
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ ++LQ K S ++ D+ PL++ E+VSG K YG F T D + R+++D+ R I
Sbjct: 225 RIASVLQGKNSNFEIDIIFPLIQFGEEVSGKK-YGEKFET------DVALRVIADHLRAI 277
Query: 311 TVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLVKELSYNIAEILGD 362
T A++D + P + +R ++R A+ L E+ F K LV +I+ +
Sbjct: 278 TFAISDGVIPSNEGRGYVIRRILRRAMRFGYKLGIENPFLYKGVDLV-------VDIMKE 330
Query: 363 VYPEIQDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
YPE++ S ++ ++ GEE R L+ G+
Sbjct: 331 PYPELELSREFVKGIVKGEEKRFIKTLKA-----------------------------GM 361
Query: 422 KYLTK--QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
+Y+ + Q A + +SG FT YDTYG ++I E+A K L + E F+ +L E
Sbjct: 362 EYIQEVIQKALEEGRKTLSGKEVFTAYDTYGFPVDLIDEIAREKGLGIDLEGFQCELEEQ 421
Query: 480 KERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPC-----LDTNLVG 533
+ER++ KHF V K K Y H K F ++ +VG
Sbjct: 422 RERAR---------------KHFKVEAKKVKPVYSHLKELGKTSAFVGYEHMEWESQVVG 466
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
+V G+ + ++ G ++ +T Y GGQI D G+
Sbjct: 467 LVKGEGLVS----ELKEGEEGE--------------VVLKETPFYPEGGGQIGDAGI--- 505
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+ + KVE + + EG IVH G V+ + KV G T VD R MR HT +
Sbjct: 506 IESDKALFKVEDTQKPT-EGIIVHIGKVLKGTLKV--GDTVHARVDKERRWDIMRNHTAT 562
Query: 653 HLLNAALRRVLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL+AALR VL +++ + +D+ DF+ + L+ + + VE+ +N+ I + V
Sbjct: 563 HLLHAALRNVLGEHVRQAGSLVADKYLRFDFTHFS-ALTEEELKRVEELVNEKIRENLPV 621
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
+ M A + T I E Y + V +I + S+E C GTHV TG I
Sbjct: 622 NVMEM-AYDEALKTGAIAIFEEKYGERVRVISCGE----FSKELCGGTHVSATGDIGYFK 676
Query: 772 VIGYKSYNHGVRSIKCLTGDSSKAAVENG-KHLSTAASFSQILNVGN 817
+I S GVR I TG + +VE K T S L VG
Sbjct: 677 IISESSVGAGVRRIVAQTG---RWSVETAFKEHQTLKKASSALGVGE 720
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ FVN+GM FKNVFLGL PY R + QKC+RV GKHNDL G S HHT
Sbjct: 30 VPENDPTLLFVNAGMVPFKNVFLGLEKRPYKRATSCQKCLRVSGKHNDLEQVGYTSRHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K++A A EF+T+ + LP ++LY +
Sbjct: 90 FFEMLGNFSFGDYFKKEAIEYAWEFVTE-VLKLPKEKLYVS 129
>gi|21673007|ref|NP_661072.1| alanyl-tRNA synthetase [Chlorobium tepidum TLS]
gi|41018235|sp|Q8KG04.1|SYA_CHLTE RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|21646071|gb|AAM71414.1| alanyl-tRNA synthetase [Chlorobium tepidum TLS]
Length = 885
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 257/805 (31%), Positives = 398/805 (49%), Gaps = 115/805 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR SFLD+F + H +V+S+P++P D ++ F N+GM QFK+VFLG Y R
Sbjct: 1 MNSREIRQSFLDFFAGKE-HRIVRSAPVIPAEDPTLLFTNAGMNQFKDVFLGKGTREYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A++QKC+R GKHNDL GRD+YHHTFFEMLGNWSF DYYK++A A E +T+
Sbjct: 60 AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKKEAIGWAWELMTE-VWK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RLY T + DEE+ +W E + HI K G K NFWEMG TGPCG
Sbjct: 119 LPKERLYATVYHD--------DEESFKLWQSETDIEHSHILKFGDKDNFWEMGETGPCGP 170
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIH D+ + S VN + +IE+WN+VFI + R + T+VPL + ++DTG+GFE
Sbjct: 171 CSEIHIDLTPDGSGG-PLVNVGDHRVIELWNLVFIQYDRQADGTLVPLPQKHVDTGMGFE 229
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +LQ K+S YD+D+F PL + I +++G +T S + D + R+++D+ R +
Sbjct: 230 RVAAVLQGKSSNYDSDVFAPLFDRITELTGT-----VYTASLDSPSDIAMRVIADHCRTL 284
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV--KELSYNIAEIL----G 361
T AL+D P + LR ++R A+ + G L + + Y + E+L G
Sbjct: 285 TFALSDGAMPGNEGRGYVLRRILRRAVRYA--------GTLGCHEPIIYKMVEVLVRTMG 336
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
DV+PE++ ++ I+ E F LV E FN +V +
Sbjct: 337 DVFPELEKQQATVEKIIRAEEESF-------------LVTLGRGTEIFN-----EVVADM 378
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
K T ISG AF LYDT+G ++ + +AA L + FE + E K
Sbjct: 379 KT--------AGSTTISGADAFKLYDTFGFPLDLTRLMAAEVGLGIDEAGFEHCMMEQKT 430
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
R++ D K K D ++ P T VG +
Sbjct: 431 RAR--------------------MDRKGKMQMQDDGGEWQWFAPEAPTTFVGYDM----- 465
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG----VAYLTNT- 596
+ A++ + ++ + + ++ D+T YA +GGQ+ D G Y +
Sbjct: 466 ---------LETEATLVAARVSGDKLL-MVLDQTPFYAESGGQVGDHGTLETAGYRLDVT 515
Query: 597 -TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T+++G+ + + S K+ + ++ + VD R+ R HT +HLL
Sbjct: 516 DTRKDGEQIVHVVTSAHDKVRDCAVTPADVSFDGVVSVKAAVDRDRRVATERNHTATHLL 575
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
+AALR+VL QK V + DFS + + +S + + VE +N I V +
Sbjct: 576 HAALRKVLGEHVQQKGSLVTPERLRFDFSHFSK-VSAEELEQVEHEVNAEIRKAASVTKH 634
Query: 715 HMRASELPFLTHLTVIP----GEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESC 770
+++P+ L + G+ Y D V ++++ IS E C GTHV N G I
Sbjct: 635 ----ADVPYEEALALGALAFFGDKYADRVRVVEVPG----ISIELCGGTHVGNIGQIGMV 686
Query: 771 TVIGYKSYNHGVRSIKCLTGDSSKA 795
++ S G+R I+ +TG +++A
Sbjct: 687 KIVSESSVAAGIRRIEAVTGAAAEA 711
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG Y R A++QKCIR GKHNDL GRD+YHHT
Sbjct: 28 IPAEDPTLLFTNAGMNQFKDVFLGKGTREYTRAADTQKCIRASGKHNDLEDVGRDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK++A A E +T+ LP +RLY T
Sbjct: 88 FFEMLGNWSFGDYYKKEAIGWAWELMTE-VWKLPKERLYAT 127
>gi|429747051|ref|ZP_19280355.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429164380|gb|EKY06522.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 877
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 246/793 (31%), Positives = 381/793 (48%), Gaps = 104/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FL +F ++GHT+V S+P+V D ++ F N+GM QFK FLG Y R
Sbjct: 1 MTSQEIREQFLKFF-ESKGHTIVPSAPMVVKNDPTLMFTNAGMNQFKEFFLGNAKPKYKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 VADTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTE-IYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F GS++ G+P D+E DIW E + +HI K NFWEMG GPCG
Sbjct: 119 IPKENLYVTVFEGSEEDGVPFDQEAYDIWKER-IAENHILLGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
+EIH D++ + A VN D +IEIWN VF+ R + ++ L +DTG+
Sbjct: 178 TEIHVDIRSDEEKAKVPGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPSRNVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ K S YDTD+F PL+ +E+++ ++ T + ++ + R++SD+
Sbjct: 238 GFERLCMVLQKKQSNYDTDVFTPLIHKVEEITQSRYTSGDRVTPEQEQVNIAIRVISDHI 297
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + A+ D P + + + + F ++ + +L ++ +G +P
Sbjct: 298 RAVAFAITDGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLSNQMGGTFP 357
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ I ++ EE F +E+ L+L V
Sbjct: 358 ELEKQQFLIMSVIKEEEASF-----------------------LRTLEQGLLMLDV---- 390
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ ++ ++SG AF LYDTYG K++ + + K LT+ +FE++L + KERS+A
Sbjct: 391 --MIQNSPGKQLSGGKAFELYDTYGFPKDLTALILSEKGLTMDEASFEEQLQKQKERSRA 448
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A D ++ DD + YDT L +V
Sbjct: 449 AAQIKADDWVIL-------RDDDEEEFIGYDT-------------LEAVV---------- 478
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
+++ R + D + L+F+ T Y GGQ+ D G + Y+ +T
Sbjct: 479 RLVKYRRVESQKDGTHFQ------LVFNTTPFYPEGGGQVGDKGTLQSANGELIYILDTK 532
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+EN I+H + + P + EV + R H+ +HLL+
Sbjct: 533 KEN------------NLIIHISEHLPTNLNDP---FKAEVHSVGREMAEANHSATHLLHQ 577
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL T QK RV + DFS + + L+ + + VE+ +N I ++ +
Sbjct: 578 ALREVLGTHVEQKGSRVAPETLRFDFSHFAK-LTEEELKKVEQLVNKRIFEKIPLQEHRN 636
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + + GE Y D V +I D S+E C GTHV NTG I +I
Sbjct: 637 IPMQQAVESGAMALFGEKYGDRVRMIQFGD-----SKELCGGTHVKNTGDIWYFKIISEG 691
Query: 777 SYNHGVRSIKCLT 789
+ G+R I+ +T
Sbjct: 692 AVAAGIRRIEAIT 704
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG Y RVA++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEFFLGNAKPKYKRVADTQKCLRVSGKHNDLEEVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGDYFKKEAISWAWELLTE-IYKIPKENLYVT 127
>gi|256818974|ref|YP_003140253.1| alanyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
gi|256580557|gb|ACU91692.1| alanyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
Length = 877
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 246/793 (31%), Positives = 382/793 (48%), Gaps = 104/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FL +F ++GHT+V S+P+V D ++ F N+GM QFK FLG Y R
Sbjct: 1 MTSQEIREQFLKFF-ESKGHTIVPSAPMVVKNDPTLMFTNAGMNQFKEFFLGNAKPKYKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 VADTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTE-IYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F GS++ G+P D+E DIW E + +HI K NFWEMG GPCG
Sbjct: 119 IPKENLYVTVFEGSEEDGVPFDQEAYDIWKER-IAENHILLGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
+EIH D++ + A VN D +IEIWN VF+ R + ++ L +DTG+
Sbjct: 178 TEIHVDIRSDEEKAKVPGRDLVNNDYPQVIEIWNNVFMEFNRKADGSLEKLPSRNVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ K S YDTD+F PL+ +E+++ ++ T+ + ++ + R++SD+
Sbjct: 238 GFERLCMVLQKKQSNYDTDVFTPLIHKVEEITQSRYTSGDRVTAEQEQVNIAIRVISDHI 297
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + A+ D P + + + + F ++ + +L ++ +G +P
Sbjct: 298 RAVAFAITDGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLSNQMGGTFP 357
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ I ++ EE F +E+ L+L V
Sbjct: 358 ELEKQQFLIMSVIKEEEASF-----------------------LRTLEQGLLMLDV---- 390
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ ++ ++SG AF LYDTYG K++ + + K LT+ +FE++L + KERS+A
Sbjct: 391 --MIQNSPGKQLSGGKAFELYDTYGFPKDLTALILSEKGLTMDEASFEEQLQKQKERSRA 448
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A D ++ DD + YDT L +V
Sbjct: 449 AAQIKADDWVIL-------RDDDEEEFIGYDT-------------LEAVV---------- 478
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
+++ R + D + L+F+ T Y GGQ+ D G + Y+ +T
Sbjct: 479 RLVKYRRVESQKDGTHFQ------LVFNTTPFYPEGGGQVGDKGTLQSANGELIYILDTK 532
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+EN I+H + + P + EV + R H+ +HLL+
Sbjct: 533 KEN------------NLIIHISEHLPTNLNDP---FKAEVHSISREMAEANHSATHLLHQ 577
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL T QK RV + DFS + + L+ + + VE+ +N I ++ +
Sbjct: 578 ALREVLGTHVEQKGSRVAPETLRFDFSHFAK-LTEEELKKVEQLVNRRIFEKIPLQEHRN 636
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + + GE Y D V +I D S+E C GTHV NTG I +I
Sbjct: 637 IPMQQAVESGAMALFGEKYGDRVRMIQFGD-----SKELCGGTHVKNTGDIWYFKIISEG 691
Query: 777 SYNHGVRSIKCLT 789
+ G+R I+ +T
Sbjct: 692 AVAAGIRRIEAIT 704
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG Y RVA++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEFFLGNAKPKYKRVADTQKCLRVSGKHNDLEEVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGDYFKKEAISWAWELLTE-IYKIPKENLYVT 127
>gi|341896970|gb|EGT52905.1| hypothetical protein CAEBREN_24503 [Caenorhabditis brenneri]
Length = 794
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 250/802 (31%), Positives = 402/802 (50%), Gaps = 88/802 (10%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDD-SIAFVNSGMCQFKNVFLGLTPAPYPRVANS 75
+R SF ++F ++ H ++KS+ ++P +D S+ F N+GM QFK L T RVAN
Sbjct: 26 LRKSFYNFF-KSKDHEILKSTSVIPNENDLSLLFTNAGMNQFKPQIL--TSTEPKRVANI 82
Query: 76 QKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYY-KRDACRMALEFLTKPPVSLPL 134
QKC+R GGKHNDL G+D +H TFFEM+GNWSFND + K +ACR A E+L + +
Sbjct: 83 QKCIRAGGKHNDLDDVGKDLHHQTFFEMMGNWSFNDAFSKEEACRFAWEYLV-DTLGIDD 141
Query: 135 DRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEI 194
DRLY +YF G + GLP D E R+IW ++GVP + + + NFWEMGS GPCG +EI
Sbjct: 142 DRLYVSYFAGIECLGLPEDHECREIWKKIGVPPERMLP-FVAENFWEMGSAGPCGPCTEI 200
Query: 195 HYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVT 254
HYD G ++A + VN + + ++EIWNIVF+S+ R S+ I L KN+IDTG+GFERL++
Sbjct: 201 HYDQIGGRNAA-SLVNVE-DSVVEIWNIVFMSNVRDSSGKIHQLGKNHIDTGMGFERLLS 258
Query: 255 ILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVAL 314
++QNK S ++TD+F PL+ I ++G G + S ++ D +R+++D+ R +TVA+
Sbjct: 259 VVQNKNSNFETDVFTPLMNKISSLTGR---GLKYNGSLKSREDAVFRLVADHVRAVTVAI 315
Query: 315 ADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSI 371
+D + PD T + +R ++R + L + + L +L + + +VYPE++ S
Sbjct: 316 SDGVTPDGTGRGFIVRKMMRRSFLQGNSKLGIDRFAL-SDLVPTVISTMKEVYPEMETSS 374
Query: 372 NKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARD 431
+ I + EE F WK + K K + L+ +
Sbjct: 375 DNIIRLFKEEEAQF----------WKTVDKA-------------------KKMFDSLSTE 405
Query: 432 PSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNV 491
+ SG AF L++TYGL ++ ELA + + FE+ E ++ S+ + +
Sbjct: 406 SRSSVFSGRKAFNLFETYGLPLSVTIELARNIGKEVDEKEFEKFRLEAQKLSRNASQFKL 465
Query: 492 PDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHA 551
P + FP DK KY ++ +Y FP + T ++ QV+ ++A
Sbjct: 466 P----ISAGEFPTHSDKEKYSCVFEAG--KYEFPQVKTRIL------QVYKNQENAD--- 510
Query: 552 RSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT----QENGKVEIGE 607
LE N ++ +K Y GGQ D+G + N + K+E G
Sbjct: 511 ---------YLEENEKGAVLLEKCQFYGEQGGQNSDVGRLLIGNKVVFEVESAKKLENGA 561
Query: 608 LASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTY 667
+ L G+ +H ++ L ++D + R G M+AH+ +HLLN AL++
Sbjct: 562 VTVLFGRALH--------RIQKDLRVEQQLDVKRREGVMKAHSATHLLNWALQKSGLGYG 613
Query: 668 QKSCRVFSDECALDFSVYGETLSVDSVAAV----EKYINDVI--ANQVQVDRRHMRASEL 721
QK V + D+ E + D + EK +N+ I + V + ++
Sbjct: 614 QKGSSVDCNRLRFDYLTSEEVVEKDQKTEILKQCEKEMNEFIRIGGETVVTETTIEGAKK 673
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
+ I V ++ + +V E C GTHV N + ++ KS H
Sbjct: 674 IKNLQSDIKEDRIGESSVRVVSLGTGSDV-PVECCSGTHVHNINMVSEIAILSDKSMGHR 732
Query: 782 VRSIKCLTGDSSKAAVENGKHL 803
+R I +TG+ +++ E K +
Sbjct: 733 LRRIIAVTGEEAQSCREYAKEV 754
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 68/104 (65%), Gaps = 5/104 (4%)
Query: 818 IPYGDD-SIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHH 876
IP +D S+ F N+GM QFK L T RVAN QKCIR GGKHNDL G+D +H
Sbjct: 48 IPNENDLSLLFTNAGMNQFKPQIL--TSTEPKRVANIQKCIRAGGKHNDLDDVGKDLHHQ 105
Query: 877 TFFEMLGNWSFNDYY-KRDACRMALEFLTKPPVSLPLDRLYFTF 919
TFFEM+GNWSFND + K +ACR A E+L + + DRLY ++
Sbjct: 106 TFFEMMGNWSFNDAFSKEEACRFAWEYLV-DTLGIDDDRLYVSY 148
>gi|167764982|ref|ZP_02437103.1| hypothetical protein BACSTE_03375 [Bacteroides stercoris ATCC
43183]
gi|167697651|gb|EDS14230.1| alanine--tRNA ligase [Bacteroides stercoris ATCC 43183]
Length = 873
Score = 366 bits (939), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 271/794 (34%), Positives = 379/794 (47%), Gaps = 111/794 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTANEIRDSFKSFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVLKL 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D LY T F GS + GL D E W + +P+DHI NFWEMG TGPCG
Sbjct: 121 DPKD-LYATVFEGSPEEGLERDNEAASYWEQF-LPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D + E P S L VN D +IEIWN+VF+ R + ++ L IDT
Sbjct: 179 SEIHVDSRSEEEKAKVPGSQL--VNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV LQ KTS YDTD+F P+L+ I ++GA YG+ D + R+++D
Sbjct: 237 GMGFERLVRTLQGKTSNYDTDVFQPILKAIGDMTGA-TYGKN------EQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I E +G
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-ENMGG 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I ++ EE F LR L G++
Sbjct: 349 AYPELNAQKELIAKVIKEEEDSF--LRT--------------------------LETGIR 380
Query: 423 YLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K + A+ TEISG AFTLYDT+G ++ + + +T + F+ ++ + K
Sbjct: 381 LLDKTMADAKAAGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTADIKEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPD-IDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGD 538
+R++ AA D I L + T + YDY Y+T+ RY
Sbjct: 441 QRARNAAAVETGDWITLQE-----GTTEFVGYDYTEYETSILRYR--------------- 480
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
I+ ++ ++ DKT YA +GGQ+ D GV L N
Sbjct: 481 --------------------QIKQKNQTLFQIVLDKTPFYAESGGQVGDTGV--LVN--- 515
Query: 599 ENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
E +E+ + +H + P + VD R C H+ +HLL+AA
Sbjct: 516 EFETIEVIDTKKENNLPIHITKKLPEHLEAPFMAC---VDTDKRAACAANHSATHLLDAA 572
Query: 659 LRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHM 716
LR VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 573 LREVLGDHVEQKGSLVTPDSLRFDFSHF-QKVTDEEIRQVEHIVNAKIRANIPLKEYRNI 631
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
E L + + GE Y D V +I S E C GTHV TG+I ++
Sbjct: 632 PIEEAKELGAIALF-GEKYGDRVRVIQFGS-----SIEFCGGTHVAATGNIGMMKIVSES 685
Query: 777 SYNHGVRSIKCLTG 790
S GVR I+ TG
Sbjct: 686 SVAAGVRRIEAYTG 699
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|326336584|ref|ZP_08202753.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325691249|gb|EGD33219.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 877
Score = 366 bits (939), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 253/798 (31%), Positives = 381/798 (47%), Gaps = 114/798 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FL +F ++GH +V S+P+V D ++ F N+GM QFK FLG R
Sbjct: 1 MTSQEIRQQFLKFF-ESKGHVIVPSAPMVIKNDPTLMFTNAGMNQFKEYFLGNAKPKQKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V ++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+KR+A A E LT+
Sbjct: 60 VVDTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKREAISWAWELLTE-VYR 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F GS + G+P D+E DIW E + DHI K NFWEMG GPCG
Sbjct: 119 IPKENLYVTVFEGSPEEGVPLDQEAYDIWKER-IAEDHILLGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E A VN D +IEIWN VF+ R + ++ L + +DTG+
Sbjct: 178 SEIHVDIRSEEEKAEIPGRDLVNRDHPQVIEIWNNVFMEFNRKADGSLEKLPAHNVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ K S YDTD+F PL+ +E+++ +K T T + +++ + R++SD+
Sbjct: 238 GFERLCMVLQKKQSNYDTDVFTPLIHKVEEITKSKYSNGTNVTPEQEEINVAIRVVSDHI 297
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + A+AD P + + + + F ++ + +L +++ +G +P
Sbjct: 298 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLGQKEPFIYKLVETLSKQMGSTFP 357
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ I ++ EE F LR LEQ G+ L
Sbjct: 358 ELEKQQFLIMSVIKEEEASF--LRT---------------LEQ-----------GLLMLD 389
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ +P ++SG AF LYDTYG K++ + + K +TL FE+ L + KERS+A
Sbjct: 390 VMIQNNPD-KQLSGSKAFELYDTYGFPKDLTALILSEKGMTLDERGFEENLQKQKERSRA 448
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A D ++ DD+ + YDT L IV
Sbjct: 449 AAQVKADDWVIL-------RDDEEEEFIGYDT-------------LKAIV---------- 478
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
+++ + + D + L+F+ T Y GGQ+ D G + Y+ +T
Sbjct: 479 RLVKYRKVESQKDGTLYQ------LVFNTTPFYPEGGGQVGDKGTLQAANGELIYILDTK 532
Query: 598 QENGKVEIGELASLEGKIVHFG-----NVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+EN I+H N+ F+ SR +A H+ +
Sbjct: 533 KEN------------NLIIHIAEHLPENLNDPFQAEVASLSRTLAEAN--------HSAT 572
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL+ ALR VL T QK V + DFS + + L+ + + VE+ +N I ++ +
Sbjct: 573 HLLHQALREVLGTHVEQKGSHVAPESLRFDFSHFAK-LTQEELRKVERLVNKRIFEKIPL 631
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
+ + + GE Y D V +I + S+E C GTHV NTG I
Sbjct: 632 EEHRNIPIRQAIESGAMALFGEKYGDHVRMIQFGE-----SKELCGGTHVKNTGDIWFFK 686
Query: 772 VIGYKSYNHGVRSIKCLT 789
+I + G+R I+ +T
Sbjct: 687 IISEGAVAAGIRRIEAIT 704
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG RV ++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEYFLGNAKPKQKRVVDTQKCLRVSGKHNDLEEVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+KR+A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGDYFKREAISWAWELLTE-VYRIPKENLYVT 127
>gi|329961902|ref|ZP_08299915.1| alanine--tRNA ligase [Bacteroides fluxus YIT 12057]
gi|328531125|gb|EGF57975.1| alanine--tRNA ligase [Bacteroides fluxus YIT 12057]
Length = 873
Score = 366 bits (939), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 270/793 (34%), Positives = 378/793 (47%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTANEIRESFKSFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVLKL 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D LY T F GS + GL D E W + +P+DHI NFWEMG TGPCG
Sbjct: 121 DPKD-LYATVFEGSPEEGLERDNEAASYWEQF-LPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D + E P S L VN D +IEIWN+VF+ R + ++ L IDT
Sbjct: 179 SEIHVDSRSEEEKAKVPGSQL--VNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV LQ KTS YDTD+F P+L+ I ++G T N D + R+++D
Sbjct: 237 GMGFERLVRTLQGKTSNYDTDVFQPILKAIADMAGT-------TYGNNQQQDIAMRVVAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I E +G
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-ENMGG 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ + I ++ EE F LR L G++
Sbjct: 349 AYPELIAQKDLIAKVIKEEEDSF--LRT--------------------------LETGIR 380
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K +A + TEISG AFTLYDT+G ++ + + +T + F+ ++ + K
Sbjct: 381 LLEKTMADAKAAGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTADIKEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA V D + LK T + YDY Y+T RY
Sbjct: 441 QRARNAAA--VETGDWITLKEG--TTEFVGYDYTEYETGILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
++ ++ ++ DKT YA +GGQ+ D GV L N E
Sbjct: 481 -------------------QVKQKNQTLYQIVLDKTPFYAESGGQVGDTGV--LVN---E 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
VE+ + +H + P + VD R C H+ +HLL+AAL
Sbjct: 517 FETVEVIDTKKENNLPIHITKKLPEHLEAPMMAC---VDTDKRAACAANHSCTHLLDAAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGDHVEQKGSLVTPDSLRFDFSHF-QKVTDEEIRQVEHIVNAKIRANIPLKEYRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y D V +I S E C GTHV TG+I ++ S
Sbjct: 633 IEEAKELGAIALF-GEKYGDHVRVIQFGS-----SIEFCGGTHVAATGNIGMVKIVSESS 686
Query: 778 YNHGVRSIKCLTG 790
G+R I+ TG
Sbjct: 687 VAAGIRRIEAYTG 699
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|315224360|ref|ZP_07866194.1| alanine--tRNA ligase [Capnocytophaga ochracea F0287]
gi|420159540|ref|ZP_14666339.1| alanine--tRNA ligase [Capnocytophaga ochracea str. Holt 25]
gi|314945750|gb|EFS97765.1| alanine--tRNA ligase [Capnocytophaga ochracea F0287]
gi|394761881|gb|EJF44196.1| alanine--tRNA ligase [Capnocytophaga ochracea str. Holt 25]
Length = 877
Score = 366 bits (939), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 246/793 (31%), Positives = 381/793 (48%), Gaps = 104/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FL +F ++GHT+V S+P+V D ++ F N+GM QFK FLG Y R
Sbjct: 1 MTSQEIREQFLKFF-KSKGHTIVPSAPMVVKNDPTLMFTNAGMNQFKEFFLGNAKPKYKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 VADTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTE-IYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F GS++ G+P D+E DIW E + +HI K NFWEMG GPCG
Sbjct: 119 IPKENLYVTVFEGSEEDGVPFDQEAYDIWKER-IAENHILLGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
+EIH D++ + A VN D +IEIWN VF+ R + ++ L +DTG+
Sbjct: 178 TEIHVDIRSDEEKAKVPGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPSRNVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ K S YDTD+F PL+ +E+++ ++ T + ++ + R++SD+
Sbjct: 238 GFERLCMVLQKKQSNYDTDVFTPLIHKVEEITQSRYTSGDRVTPEQEQVNIAIRVISDHI 297
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + A+ D P + + + + F ++ + +L ++ +G +P
Sbjct: 298 RAVAFAITDGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLSNQMGGTFP 357
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ I ++ EE F +E+ L+L V
Sbjct: 358 ELEKQQFLIMSVIKEEEASF-----------------------LRTLEQGLLMLDV---- 390
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ ++ ++SG AF LYDTYG K++ + + K LT+ +FE++L + KERS+A
Sbjct: 391 --MIQNSPGKQLSGGKAFELYDTYGFPKDLTALILSEKGLTMDEASFEEQLQKQKERSRA 448
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A D ++ DD + YDT L +V
Sbjct: 449 AAQIKADDWVIL-------RDDDEEEFIGYDT-------------LEAVV---------- 478
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
+++ R + D + L+F+ T Y GGQ+ D G + Y+ +T
Sbjct: 479 RLVKYRRVESQKDGTHFQ------LVFNTTPFYPEGGGQVGDKGTLQSANGELIYILDTK 532
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+EN I+H + + P + EV + R H+ +HLL+
Sbjct: 533 KEN------------NLIIHISEHLPTNLNDP---FKAEVHSISREMAEANHSATHLLHQ 577
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL T QK RV + DFS + + L+ + + VE+ +N I ++ +
Sbjct: 578 ALREVLGTHVEQKGSRVAPETLRFDFSHFAK-LTEEELKKVEQLVNRRIFEKIPLQEHRN 636
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + + GE Y D V +I D S+E C GTHV NTG I +I
Sbjct: 637 IPMQQAVESGAMALFGEKYGDRVRMIQFGD-----SKELCGGTHVKNTGDIWYFKIISEG 691
Query: 777 SYNHGVRSIKCLT 789
+ G+R I+ +T
Sbjct: 692 AVAAGIRRIEAIT 704
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG Y RVA++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEFFLGNAKPKYKRVADTQKCLRVSGKHNDLEEVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGDYFKKEAISWAWELLTE-IYKIPKENLYVT 127
>gi|194337650|ref|YP_002019444.1| alanyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
gi|194310127|gb|ACF44827.1| alanyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
Length = 888
Score = 366 bits (939), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 265/814 (32%), Positives = 397/814 (48%), Gaps = 134/814 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR SFLDYF + HT+V+S+P++P D ++ F N+GM QFK+VFLG PY R
Sbjct: 1 MKSWEIRQSFLDYFAQ-KAHTIVRSAPVIPADDPTLLFTNAGMNQFKDVFLGKGSRPYVR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A++QKC+R GKHNDL GRD+YHHTFFEMLGNWSF DYYK++A A E LT
Sbjct: 60 AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKQEAITWAWELLTD-VWK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RLY T + D+E+ IW + DHI + G K NFWEMG TGPCG
Sbjct: 119 LPKERLYATVY--------QDDDESFQIWKTATDINPDHIIRFGEKDNFWEMGETGPCGP 170
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIH D+ E S + VN +IE+WN+VFI + R S ++ PL ++DTG+GFE
Sbjct: 171 CSEIHIDLT-EDGSGHSLVNVGDYRVIELWNLVFIQYNRQSDGSLEPLPMKHVDTGMGFE 229
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +LQ K S YD+D+F PL + I +++G + YG + LD + R+++D++R +
Sbjct: 230 RVAAVLQGKGSNYDSDVFQPLFDRITEITGVR-YGASMDDP----LDIAMRVIADHARTL 284
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVKQG---KLVKELSYNIAEILGDVYPEI 367
T AL+D P + + R V +L + G ++ +L +A +GDV+PE+
Sbjct: 285 TFALSDGAMP--SNEGRGYVLRRILRRALRYSKNLGYNEPILHQLVGTLAASMGDVFPEL 342
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ + I+ E F +V +E FN + E
Sbjct: 343 RKQQETVSKIIRAEEESF-------------IVTLDRGIEIFNEVIEQ------------ 377
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
R + T I+G+ AF LYDTYG ++ + +A+ ++ E FE + + K R++
Sbjct: 378 -VRSANSTTITGEDAFKLYDTYGFPFDLTRLMASDVGFSVDGEGFEHCMQQQKTRARTDR 436
Query: 488 ASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHA 547
KH V DD ++ + D + R F D + ++I
Sbjct: 437 KE----------KH-QVQDDGSQWLWFSDVH--RSEFAGYDQLEMPVLI---------TG 474
Query: 548 IRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGE 607
I+H + + L+ D+T YA +GGQ+ D G ++ + T ++++ +
Sbjct: 475 IKHLQGK-------------LLLVLDRTPFYAESGGQVGDRG--WIESATY---RLQVSD 516
Query: 608 LASLEGKIVHFGNVVSSFKV---TP-----------GLTSRVEVDARMRLGCMRAHTTSH 653
IVH V +F TP L++ VD +R HT +H
Sbjct: 517 TIKDGDAIVHL--VTEAFDKILDTPISVDDLQLDEKELSAEASVDRHLRQDTECNHTATH 574
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
L+++ALRR+L QK V ++ DFS + + + AVE +ND
Sbjct: 575 LMHSALRRILGQHVQQKGSYVNAERLRFDFSHFSRMTEAE-IEAVEADVND--------- 624
Query: 713 RRHMRASELPFLTHLTVIP------------GEIYPDDVILIDISDKENVISREPCCGTH 760
H+R +E P H V+ G+ Y D V +I+I IS E C GTH
Sbjct: 625 --HIRRAE-PVQKHADVLYDDAIAMGALAFFGDKYADRVRVIEIPG----ISVELCGGTH 677
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSK 794
N G I ++ S GVR I+ LTG +++
Sbjct: 678 ADNIGRIGLFKIVSESSVASGVRRIEALTGKAAE 711
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG PY R A++QKCIR GKHNDL GRD+YHHT
Sbjct: 28 IPADDPTLLFTNAGMNQFKDVFLGKGSRPYVRAADTQKCIRASGKHNDLEDVGRDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK++A A E LT LP +RLY T
Sbjct: 88 FFEMLGNWSFGDYYKQEAITWAWELLTD-VWKLPKERLYAT 127
>gi|333378351|ref|ZP_08470082.1| alanyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
gi|332883327|gb|EGK03610.1| alanyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
Length = 871
Score = 366 bits (939), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 258/792 (32%), Positives = 386/792 (48%), Gaps = 103/792 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ SK IR SF +F + + H +V S+P+V GD ++ F N+GM QFK+V LG P Y R
Sbjct: 1 MTSKEIRESFKSFFASKE-HKIVPSAPMVIKGDPTLMFTNAGMNQFKDVILGNAPIKYAR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+LT+ ++
Sbjct: 60 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIEWAWEYLTE-VLA 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +RLY T F GS GL D+E W E +P D I K NFWEMG TGPCG
Sbjct: 119 LDKNRLYVTVFEGSPSEGLSRDDEAAAYW-EKYLPVDRIINGNKKDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + A L VN ++EIWN+VF+ + R + ++ PL IDTG+
Sbjct: 178 SEIHIDLRSDEERAKVDGLTLVNQSDPQVVEIWNLVFMQYNRKADKSLDPLPAKVIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +Q KTS YDTD+F +TI K GA T D + R+++D+
Sbjct: 238 GFERLCMAVQGKTSNYDTDVF----QTIIKALGALA---NTTYGEDVKKDIAMRVIADHV 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++ D P A +R ++R A+ F + + +L + E +GD Y
Sbjct: 291 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGY-TFLDQHKSFMYKLLPALIETMGDAY 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ I+ ++ EE F LR L G+K L
Sbjct: 350 PELIQQQTLIEKVMKEEEESF--LRT--------------------------LETGIKLL 381
Query: 425 TKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
KQ+ A+ +TEISG AFTLYDTYG ++ + + +++ F+ ++ + K+R
Sbjct: 382 DKQIADAKVKGLTEISGVEAFTLYDTYGFPLDLTELILKENDMSVDEAGFKAEMQKQKDR 441
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
++ AA D T DT VG D C
Sbjct: 442 ARNAAAVETEDW---------------------------VTLKDGDTEFVGY---DFTEC 471
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
+ +R+ + ++ +++ + ++ +T YA GGQ+ D G + T
Sbjct: 472 -ETEILRYRK-------VKQKNSEFYQIVLSRTPFYAEMGGQVGDSGWLVTDDET----- 518
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
+E+ + VH N + +T +R+ + R C HT +HLL+ LR +
Sbjct: 519 IEMSDTKRENNLAVHLSNKLPQ-DLTATFIARINLKNRTATEC--NHTATHLLHEGLREI 575
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMRASE 720
L + QK V DFS + + L+ + VE+Y+ I N ++ + RH+ +E
Sbjct: 576 LGSHVEQKGSYVSPSVLRFDFSHF-QKLTDKEIREVERYVTGKIRENIIREEMRHVPIAE 634
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+ + + GE Y +DV +I D S E C GTH+ +TG I S +I S
Sbjct: 635 AKEMGAMALF-GEKYGEDVRVIRFGD-----SVELCGGTHISSTGRIGSFRIINESSIAA 688
Query: 781 GVRSIKCLTGDS 792
G+R I+ +T ++
Sbjct: 689 GIRRIEAITAEA 700
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 72/98 (73%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK+V LG P Y RVA+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 31 GDPTLMFTNAGMNQFKDVILGNAPIKYARVADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 90
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K++A A E+LT+ ++L +RLY T
Sbjct: 91 MLGNWSFGDYFKKEAIEWAWEYLTE-VLALDKNRLYVT 127
>gi|297616546|ref|YP_003701705.1| alanyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297144383|gb|ADI01140.1| alanyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 877
Score = 366 bits (939), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 270/820 (32%), Positives = 404/820 (49%), Gaps = 119/820 (14%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
S IR FLDYF GHT+V+SS +VP D ++ F N+GM QFK+VFLG+ PY R
Sbjct: 4 SSEIRKMFLDYFAEN-GHTVVESSSLVPANDPTLLFTNAGMNQFKDVFLGIDKRPYTRAT 62
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
+SQKCVR GGKHNDL GR + HHTFFEMLGN+SF DY+KR+A A + LT+ + LP
Sbjct: 63 SSQKCVRAGGKHNDLETVGRTARHHTFFEMLGNFSFGDYFKREAIFYAWDLLTR-VIGLP 121
Query: 134 LDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSS 192
+RL+ T F D+E ++W E+ G+ I + G K NFW MG TGPCG S
Sbjct: 122 PERLWVTIF--------TDDDEAFELWQEIAGISPQKIVRMGEKDNFWAMGDTGPCGPCS 173
Query: 193 EIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
EI YD +GE P AL + DR +EIWN+VF+ R A + PL + IDTG
Sbjct: 174 EIIYD-RGEKYRCDAPLCALGVCDCDR--WLEIWNLVFMQFNRDEAGNLTPLPRPSIDTG 230
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ER+ +ILQ S +DTDLF+P+++ IE+++G K +R +R+++D+
Sbjct: 231 MGLERITSILQGVDSNFDTDLFIPIIQKIEEMTGKK--------YDRGPGGFPFRVIADH 282
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
SR T + D + P + LR ++R A+ + ++ L + + + + + D
Sbjct: 283 SRACTFLIGDGVLPSNEGRGYVLRRILRRAVRFGR-LLGIEAPFLYRMVGV-VVDKMKDS 340
Query: 364 YPEIQDSINKI-QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YP++ D + +++ EE R F L + K + + + Q E G K
Sbjct: 341 YPDLVDKQEFVAKVVRMEEERFFVTLNEGIRKVGEIIERCQAE--------------GRK 386
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+ISG AF LYDTYG ++ +++A L + E F + + E +ER
Sbjct: 387 -------------DISGQDAFMLYDTYGFPLDLTEDMAEENGLGVNKEDFNRLMEEQRER 433
Query: 483 SKAKAASNVPDIDLMD------LKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
A+ A D + L+ P TD ++ + +T T + I+
Sbjct: 434 --ARRAQKGEDAFAQEKRLAEMLEGIPSTD--------FEGYQRLFTL----TQIQAIIS 479
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
GD+ + R G +I L+ +T YA +GGQ+ D GV
Sbjct: 480 GDEELDL-------IRDGGAI------------LVLAQTPFYAESGGQVADKGV-----I 515
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
G + ++ + G I+H+G V + + EVD + RL R HT +HLL+
Sbjct: 516 KGSEGTFIVDDVKKVAGWILHYGRVQGI--LVKNEEVQAEVDEQRRLATARNHTATHLLH 573
Query: 657 AALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN--QVQVDR 713
ALR V+ QK V + DFS + L+ + + A+E +N I + +V+VD
Sbjct: 574 RALRMVVGEHAQQKGSLVEPERLRFDFSHFA-PLTEEEIQAIEDIVNRKIWDLEKVEVDL 632
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
+ ++ L GE Y D+V +I I D S E C GTHV NTG I +I
Sbjct: 633 ATLEEAKQKGAMALF---GEKYGDEVRVISIGD----FSIELCGGTHVENTGQIGLFKII 685
Query: 774 GYKSYNHGVRSIKCLTGDSSKAAVE-NGKHLSTAASFSQI 812
S G+R ++ LTG + + + L TAAS ++
Sbjct: 686 NEGSIGAGLRRVEALTGPRALDYLNAQERELKTAASVLKV 725
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 79/122 (64%), Gaps = 9/122 (7%)
Query: 798 ENGKHLSTAASFSQILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCI 857
ENG + ++S +P D ++ F N+GM QFK+VFLG+ PY R +SQKC+
Sbjct: 17 ENGHTVVESSSL--------VPANDPTLLFTNAGMNQFKDVFLGIDKRPYTRATSSQKCV 68
Query: 858 RVGGKHNDLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYF 917
R GGKHNDL GR + HHTFFEMLGN+SF DY+KR+A A + LT+ + LP +RL+
Sbjct: 69 RAGGKHNDLETVGRTARHHTFFEMLGNFSFGDYFKREAIFYAWDLLTR-VIGLPPERLWV 127
Query: 918 TF 919
T
Sbjct: 128 TI 129
>gi|340382452|ref|XP_003389733.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Amphimedon
queenslandica]
Length = 936
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 254/817 (31%), Positives = 399/817 (48%), Gaps = 138/817 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG-LTP---- 66
L +K IR F++YF ++GHT V SS +P+ D +++F N+GM QFK +F G + P
Sbjct: 18 LTAKEIRRIFINYF-QSKGHTFVPSSSTLPHNDQTLSFTNAGMNQFKPIFQGTIDPSSDF 76
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
A R N QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K++A MA FLT
Sbjct: 77 ARLSRAVNYQKCIRAGGKHNDLDVVGKDTYHHTFFEMLGNWSFGDYFKKEAIEMAWSFLT 136
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
++L DRLY TYFGG ++ LP D+E R IW+ LG+ + + + NFWEMG TG
Sbjct: 137 DT-LNLSKDRLYVTYFGGDEKLNLPPDDECRGIWINLGLSPERVLPFSVNDNFWEMGDTG 195
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG +EIHYD G +A VN + D++E+WNIV + R + +I L +NYIDTG
Sbjct: 196 PCGPCTEIHYDRIGGRFAA-NLVNMNDPDVLELWNIVIMQFNREADGSIKRLPRNYIDTG 254
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LG ER+V+++QNK S YDTDLF+P+ + I++ +G + YG + +D +YR+++D+
Sbjct: 255 LGLERIVSVVQNKFSNYDTDLFVPIFDAIQQKTGFRGYGGRVGAEDIDGIDMAYRVVADH 314
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R +TVA++D P LR +++ + + K L + +ILG+
Sbjct: 315 IRTLTVAISDGGRPATRGSNHVLRQILKRGVYYLTNKLNAKPCTFAS-LVPTVVDILGEA 373
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
YPE+ ++ I+ EE F L+ ++ +K + L++
Sbjct: 374 YPELTKDPERVMDIINEEEEHF--LKSLSIGR----IKFEEALQKV-------------- 413
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE-- 481
D +I + GD+ L+ GL+ ++IQ +A +++ + E F +K L++
Sbjct: 414 -------DNNI--LPGDVLCDLHIDTGLTIDLIQLMADERQVRVDIEGF-KKAKALRQEH 463
Query: 482 -----RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
R + +V ID K P TDD KY+Y D Y+FP ++++ +
Sbjct: 464 GGWISRPETSVQFDVHAIDYFTSKGLPPTDDIPKYNYSSDEFGN-YSFPSCTSSIIAL-- 520
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
++G +D + + VG+ DKT YA GGQ+ D G ++ T
Sbjct: 521 --------------KQNGEFVDEVTSGQS--VGVFTDKTCFYAEQGGQVCDKG--FIVKT 562
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+E K + ++ G ++H G TS G +R T
Sbjct: 563 GEET-KFMVNDVQVGGGYVMHVG------------TSE---------GTLRVGDT----- 595
Query: 657 AALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
+D + G +++ + + E+ ++I V +
Sbjct: 596 -----------------------VDMIINGNSVTANKIKECEEIALEIIKANHPV---YA 629
Query: 717 RASELPFLTH---LTVIPGEIYPDDVILIDISDKENVISREP------------CCGTHV 761
+ + LP + L VI EIYP+ V ++ I + + +P CCGTH+
Sbjct: 630 KEAPLPIVKEIKGLRVINAEIYPNPVRVLSIGVPVDKLVEDPSGPWGTEYSVEFCCGTHL 689
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
T HI+S ++ + G R I LTG + A E
Sbjct: 690 NLTSHIDSFVIVSEEGSGEGFRRIVALTGTEAIKAHE 726
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLG-LTP----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D +++F N+GM QFK +F G + P A R N QKCIR GGKHNDL G+D
Sbjct: 45 LPHNDQTLSFTNAGMNQFKPIFQGTIDPSSDFARLSRAVNYQKCIRAGGKHNDLDVVGKD 104
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K++A MA FLT ++L DRLY T+
Sbjct: 105 TYHHTFFEMLGNWSFGDYFKKEAIEMAWSFLTD-TLNLSKDRLYVTY 150
>gi|423305263|ref|ZP_17283262.1| alanyl-tRNA synthetase [Bacteroides uniformis CL03T00C23]
gi|423311081|ref|ZP_17289050.1| alanyl-tRNA synthetase [Bacteroides uniformis CL03T12C37]
gi|392680113|gb|EIY73487.1| alanyl-tRNA synthetase [Bacteroides uniformis CL03T12C37]
gi|392681885|gb|EIY75241.1| alanyl-tRNA synthetase [Bacteroides uniformis CL03T00C23]
Length = 872
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 271/793 (34%), Positives = 379/793 (47%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTANEIRDSFKSFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVLKL 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D LY T F GS + GL D E W + +P+DHI NFWEMG TGPCG
Sbjct: 121 DPKD-LYATVFEGSAEEGLERDNEAASYWEQF-LPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D + E P S L VN D +IEIWN+VF+ R + ++ L IDT
Sbjct: 179 SEIHVDSRSEEEKAKVPGSQL--VNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV LQ KTS YDTD+F P+L+ I ++G K YG + D + R+++D
Sbjct: 237 GMGFERLVRTLQGKTSNYDTDVFQPILKAIGDMAG-KKYGEDEKS------DIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I E +G
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-ENMGA 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I ++ EE F LR L G++
Sbjct: 349 AYPELDAQKELIAKVIKEEEDSF--LRT--------------------------LETGIR 380
Query: 423 YLTKQLARDPSI--TEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K +A S EISG AFTLYDT+G ++ + + +T + F+ ++ + K
Sbjct: 381 LLEKTMADAKSTGKNEISGKDAFTLYDTFGFPLDLTELILRENGMTADIKEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA + D + LK T + YDY Y+T+ RY
Sbjct: 441 QRARNAAA--IETGDWITLKEG--TTEFVGYDYTEYETSILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
++ ++ ++ DKT YA +GGQ+ D GV L N E
Sbjct: 481 -------------------QVKQKNQTLYQIVLDKTPFYAESGGQVGDTGV--LVN---E 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + P + VD R C H+ +HLL+AAL
Sbjct: 517 FETIEVVDTKKENNLPIHITKKLPEHMEAPMMAC---VDTDKRAACAANHSATHLLDAAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEEIRKVEHIVNAKIRANIPLKEYRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y D V +I S E C GTHV TG+I +I S
Sbjct: 633 IEEAKELGAIALF-GEKYGDHVRVIQFGS-----SVEFCGGTHVAATGNIGMVKIISESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|340616973|ref|YP_004735426.1| alanyl-tRNA synthetase [Zobellia galactanivorans]
gi|339731770|emb|CAZ95035.1| Alanyl-tRNA synthetase [Zobellia galactanivorans]
Length = 871
Score = 365 bits (938), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 257/800 (32%), Positives = 386/800 (48%), Gaps = 114/800 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ SK IRS FL++F +GH +V S+P+V D ++ F N+GM QFK FLG + A PR
Sbjct: 1 MTSKEIRSQFLNFF-KEKGHKIVPSAPMVIKDDPTLMFTNAGMNQFKEFFLGNSVAKNPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQKC+RV GKHNDL G+D+YHHT FEMLGNWSF DY+K++A A E LT+ +
Sbjct: 60 AVDSQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKKEAIEWAWELLTE-VLK 118
Query: 132 LPLDRLYFTYFGGS-DQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+ D LY + F GS D L D E D+W + VP D I K NFWEMG GPCG
Sbjct: 119 IDKDCLYVSVFEGSKDADKLDLDTEAFDLWKAI-VPEDRIILGNKKDNFWEMGDQGPCGP 177
Query: 191 SSEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH D++ A + VNAD ++EIWN+VF+ + R + ++ PL ++DTG
Sbjct: 178 CSEIHVDIRSAEEKAKVPGASLVNADHPQVVEIWNLVFMQYNRKADGSLEPLPARHVDTG 237
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERL ++Q S YDTD+F P++ IE ++ +K YG+ ++D + R+++D+
Sbjct: 238 MGFERLCMVMQGVQSNYDTDVFKPIIREIETITHSK-YGKD------EEIDIAIRVIADH 290
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R ++ ++AD P T +R ++R A+ K+ + + L + E +G+
Sbjct: 291 IRAVSFSIADGQLPSNTGAGYVIRRILRRAVRYGFTFLNTKEPFMYR-LVNVLTEDMGEA 349
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE+++ I+ ++ EE F +KT LEQ GLV
Sbjct: 350 FPELKEQRQLIENVIKEEEYSF--------------LKT---LEQ-------GLV----- 380
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L Q+ + E+ G AF LYDTYG ++ + + K LTL + FE + E K RS
Sbjct: 381 LLDQVILNVKGKEVDGRKAFELYDTYGFPIDLTALILSEKGLTLDEKGFELAMQEQKNRS 440
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
K+ + + D +++ D + + L+TN V +
Sbjct: 441 KSASEISKDDWEVLS----------------SDLEQEFVGYDMLETN---------VKLV 475
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTN 595
+ ++G L+F+ T Y GGQ+ D G V Y+ +
Sbjct: 476 KYRKVTSKKAGEQYQ-----------LVFNLTPFYPEGGGQVGDKGYLEMPNGDVVYILD 524
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T +EN +I+HF + T R VD + R HT +HLL
Sbjct: 525 TKKEN------------NEIIHF---TKNLPADLNGTFRAVVDKKQRERTQANHTATHLL 569
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
+ ALR VL QK V S DFS + + ++ + + VE ++N IA Q+ + +
Sbjct: 570 HQALREVLGKHVEQKGSAVHSKYLRFDFSHFSK-VTPEELREVENFVNARIAGQLPFEEQ 628
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
E + GE Y D V + S E C GTHV NTG I +
Sbjct: 629 RNIPVEKALEEGAMALFGEKYGDTVRTVRFGR-----SIELCGGTHVKNTGDIWHFKIKS 683
Query: 775 YKSYNHGVRSIKCLTGDSSK 794
+ G+R I+ +T D+ K
Sbjct: 684 EGAVASGIRRIEAITSDAVK 703
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 61/84 (72%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG + A PR +SQKC+RV GKHNDL G+D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEFFLGNSVAKNPRAVDSQKCLRVSGKHNDLEEVGKDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTK 905
LGNWSF DY+K++A A E LT+
Sbjct: 92 LGNWSFGDYFKKEAIEWAWELLTE 115
>gi|270294506|ref|ZP_06200708.1| alanyl-tRNA synthetase [Bacteroides sp. D20]
gi|270275973|gb|EFA21833.1| alanyl-tRNA synthetase [Bacteroides sp. D20]
Length = 872
Score = 365 bits (938), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 269/791 (34%), Positives = 377/791 (47%), Gaps = 105/791 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTANEIRDSFKSFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVLKL 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D LY T F GS + GL D E W + +P+DHI NFWEMG TGPCG
Sbjct: 121 DPKD-LYATVFEGSAEEGLERDNEAASYWEQF-LPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D + E A VN D +IEIWN+VF+ R + ++ L IDTG+
Sbjct: 179 SEIHVDSRSEEEKAKVSGSQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV LQ KTS YDTD+F P+L+ I ++G K YG + D + R+++D+
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPILKAIGDMAG-KKYGEDEKS------DIAMRVIADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++ D P A +R ++R A+ KQ + K L I E +G Y
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-ENMGAAY 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ I ++ EE F LR L G++ L
Sbjct: 351 PELDAQKELIAKVIKEEEDSF--LRT--------------------------LETGIRLL 382
Query: 425 TKQLARDPSI--TEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
K +A S EISG AFTLYDT+G ++ + + +T + F+ ++ + K+R
Sbjct: 383 EKTMADAKSTGKNEISGKDAFTLYDTFGFPLDLTELILRENGMTADIKEFDAEMQQQKQR 442
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
++ AA + D + LK T + YDY Y+T+ RY
Sbjct: 443 ARNAAA--IETGDWITLKEG--TTEFVGYDYTEYETSILRYR------------------ 480
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
++ ++ ++ DKT YA +GGQ+ D GV L N E
Sbjct: 481 -----------------QVKQKNQTLYQIVLDKTPFYAESGGQVGDTGV--LVN---EFE 518
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+E+ + +H + P + VD R C H+ +HLL+AALR
Sbjct: 519 TIEVVDTKKENNLPIHITKKLPEHMEAPMMAC---VDTDKRAACAANHSATHLLDAALRE 575
Query: 662 VL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMRAS 719
VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 576 VLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEEIRKVEHIVNAKIRANIPLKEYRNIPIE 634
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
E L + + GE Y D V +I S E C GTHV TG+I +I S
Sbjct: 635 EAKELGAIALF-GEKYGDHVRVIQFGS-----SVEFCGGTHVAATGNIGMVKIISESSVA 688
Query: 780 HGVRSIKCLTG 790
GVR I+ TG
Sbjct: 689 AGVRRIEAYTG 699
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|198276957|ref|ZP_03209488.1| hypothetical protein BACPLE_03162 [Bacteroides plebeius DSM 17135]
gi|198270482|gb|EDY94752.1| alanine--tRNA ligase [Bacteroides plebeius DSM 17135]
Length = 872
Score = 365 bits (937), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 264/790 (33%), Positives = 379/790 (47%), Gaps = 103/790 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR SF+ +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTANEIRDSFVKFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V +SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L
Sbjct: 61 VTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAYEYLVSILKL 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D LY T F GS G+ D+E W + P DHI NFWEMG TGPCG
Sbjct: 121 DPKD-LYVTVFEGSPSEGISRDDEAASYWGQF-FPEDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKG--EPSSALAR--VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D + E ++ R VN D +IEIWN+VF+ + R + T+ PL IDTG+
Sbjct: 179 SEIHIDSRSAEEKAAVPGRELVNKDHPQVIEIWNLVFMQYNRKADGTLEPLPAKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV LQ KTS YDTD+F P+++ I +SG K YG T D + R+++D+
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPIIKVIGDLSGKK-YGDDEKT------DVAMRVVADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++ D P A +R ++R A+ + KQ + K L + E +G Y
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYAYTFLGQKQAFMYK-LVPVLIENMGGAY 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ I+ ++ EE F LR L G++ L
Sbjct: 351 PELKAQQALIEKVMKEEEESF--LRT--------------------------LETGIRLL 382
Query: 425 TKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
K + + TEISG AFTLYDT+G ++ + + LT + FE ++ + KER
Sbjct: 383 EKTMNETKAAGKTEISGVDAFTLYDTFGFPFDLTELILRENGLTADVKGFEAEMQKQKER 442
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
++ AA V D + LK T Y Y Y+T+ RY
Sbjct: 443 ARNAAA--VETGDWVTLKEGETTFVGYDYT-EYETSILRYR------------------- 480
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
I+ ++ ++ +T YA +GGQ+ D GV E
Sbjct: 481 ----------------QIKQKNQTLYQIVLSETPFYAESGGQVGDTGV-----LVSEFET 519
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
++I + +H + P + VD R C H+ +HLL+ ALR+V
Sbjct: 520 IDIIDTKKENNLPIHIAKKLPEHLEAPMMAC---VDTDKRAACAANHSCTHLLDEALRQV 576
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRHMRASE 720
L T QK V + DFS + + ++ + + VE +N I V + + R++ +
Sbjct: 577 LGTHVEQKGSLVTPESLRFDFSHF-QKVTPEQIREVEHLVNAKIRENVPLTEYRNLPIEK 635
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
L + + GE Y D+V ++ S E C GTHV TG I +I S
Sbjct: 636 AKELGAIALF-GEKYGDEVRVVQFGS-----SIEFCGGTHVSATGKIGMVKIISESSVAA 689
Query: 781 GVRSIKCLTG 790
GVR I+ +TG
Sbjct: 690 GVRRIEAVTG 699
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 61/82 (74%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RV +SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAYEYL 114
>gi|160891225|ref|ZP_02072228.1| hypothetical protein BACUNI_03673 [Bacteroides uniformis ATCC 8492]
gi|317481112|ref|ZP_07940189.1| tRNA synthetase class II [Bacteroides sp. 4_1_36]
gi|156859446|gb|EDO52877.1| alanine--tRNA ligase [Bacteroides uniformis ATCC 8492]
gi|316902713|gb|EFV24590.1| tRNA synthetase class II [Bacteroides sp. 4_1_36]
Length = 872
Score = 365 bits (937), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 270/793 (34%), Positives = 379/793 (47%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTANEIRDSFKSFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVLKL 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D LY T F GS + GL D E W + +P+DHI NFWEMG TGPCG
Sbjct: 121 DPKD-LYATVFEGSAEEGLERDNEAASYWEQF-LPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D + E P S L VN D +IEIWN+VF+ R + ++ L IDT
Sbjct: 179 SEIHVDSRSEEEKAKVPGSQL--VNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV LQ KTS YDTD+F P+L+ I ++G K YG + D + R+++D
Sbjct: 237 GMGFERLVRTLQGKTSNYDTDVFQPILKAIGDMAG-KKYGEDEKS------DIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I E +G
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-ENMGA 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I ++ EE F LR L G++
Sbjct: 349 AYPELDAQKELIAKVIKEEEDSF--LRT--------------------------LETGIR 380
Query: 423 YLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K + A+ EISG AFTLYDT+G ++ + + +T + F+ ++ + K
Sbjct: 381 LLEKTMADAKAAGKNEISGKDAFTLYDTFGFPLDLTELILRENGMTADIKEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA + D + LK T + YDY Y+T+ RY
Sbjct: 441 QRARNAAA--IETGDWITLKEG--TTEFVGYDYTEYETSILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
++ ++ ++ DKT YA +GGQ+ D GV L N E
Sbjct: 481 -------------------QVKQKNQTLYQIVLDKTPFYAESGGQVGDTGV--LVN---E 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + P + VD R C H+ +HLL+AAL
Sbjct: 517 FETIEVVDTKKENNLPIHITKKLPEHMEAPMMAC---VDTDKRAACAANHSATHLLDAAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEEIRKVEHIVNAKIRANIPLKEYRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y D V +I S E C GTHV TG+I +I S
Sbjct: 633 IEEAKELGAIALF-GEKYGDHVRVIQFGS-----SVEFCGGTHVAATGNIGMVKIISESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|424661875|ref|ZP_18098912.1| alanyl-tRNA synthetase [Bacteroides fragilis HMW 616]
gi|404578186|gb|EKA82921.1| alanyl-tRNA synthetase [Bacteroides fragilis HMW 616]
Length = 872
Score = 365 bits (937), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 265/793 (33%), Positives = 383/793 (48%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K R SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKETRDSFKNFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYHR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D E IW + +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLERDNEAASIWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + T+ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSTLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F PL++ I +++G + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPLIKAIAQMAGTE-YGKNEQN------DIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +GD
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DSMGD 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ A KE V + E +E G++
Sbjct: 349 AYPEL-----------------------IAQKELIEKVIKEEEESFLRTLE-----TGIR 380
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K +A + TEISG AFTLYDT+G ++ + + +T+ E F+ ++ + K
Sbjct: 381 LLDKTMADTKANGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNVEEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA D ++ T + YDY Y+T+ RY
Sbjct: 441 QRARNAAAIETGDWIILK----EGTTEFVGYDYTEYETSILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
++ ++ ++ D T YA +GGQ+ D GV L N E
Sbjct: 481 -------------------QVKQKNQTLYQIVLDYTPFYAESGGQVGDTGV--LVN---E 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + P + VD R C H+ +HLL+ AL
Sbjct: 517 FETIEVIDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDEAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEELRKVEHLVNAKIRANVPLQEHRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y D V +I S E C GTHV TG+I +I S
Sbjct: 633 IEEAKELGAIALF-GEKYGDHVRVIQFGS-----SIEFCGGTHVAATGNIGMVKIISESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYHRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|329957545|ref|ZP_08298020.1| alanine--tRNA ligase [Bacteroides clarus YIT 12056]
gi|328522422|gb|EGF49531.1| alanine--tRNA ligase [Bacteroides clarus YIT 12056]
Length = 873
Score = 365 bits (937), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 271/794 (34%), Positives = 379/794 (47%), Gaps = 111/794 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTANEIRDSFKSFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVLKL 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D LY T F GS + GL D E W + +P+DHI NFWEMG TGPCG
Sbjct: 121 DPKD-LYATVFEGSPEEGLERDNEAASYWEQF-LPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D + E P S L VN D +IEIWN+VF+ R + ++ L IDT
Sbjct: 179 SEIHVDSRSEEEKAKVPGSQL--VNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV LQ KTS YDTD+F P+L+ I +SG YG+ D + R+++D
Sbjct: 237 GMGFERLVRTLQGKTSNYDTDVFQPMLKAIGDMSGT-AYGKN------EQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I E +G
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-ENMGG 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I ++ EE F LR L G++
Sbjct: 349 AYPELNAQKELIAKVIKEEEDSF--LRT--------------------------LETGIR 380
Query: 423 YLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K + A+ TEISG AFTLYDT+G ++ + + +T + F+ ++ + K
Sbjct: 381 LLDKTMADAKAAGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTADIKEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPD-IDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGD 538
+R++ AA D I L + T + YDY Y+T+ RY
Sbjct: 441 QRARNAAAVETGDWITLQE-----GTTEFVGYDYTEYETSILRYR--------------- 480
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
I+ ++ ++ DKT YA +GGQ+ D GV L N
Sbjct: 481 --------------------QIKQKNQTLYQIVLDKTPFYAESGGQVGDTGV--LVN--- 515
Query: 599 ENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
E +E+ + +H + P + VD R C H+ +HLL+AA
Sbjct: 516 EFETIEVIDTKKENNLPIHITKKLPEHLEAPLMAC---VDTDKRAACAANHSATHLLDAA 572
Query: 659 LRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHM 716
LR VL QK V + DFS + + ++ + + VE +N I AN + R++
Sbjct: 573 LREVLGEHVEQKGSLVSPESLRFDFSHF-QKVTDEEIRRVEHIVNAKIRANIPLKEYRNI 631
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
E L + + GE Y D V +I S S E C GTHV TG+I ++
Sbjct: 632 PIEEAKELGAIALF-GEKYGDHVRVIQFSS-----SIEFCGGTHVAATGNIGMIKIVSES 685
Query: 777 SYNHGVRSIKCLTG 790
S GVR I+ TG
Sbjct: 686 SVAAGVRRIEAYTG 699
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|224025892|ref|ZP_03644258.1| hypothetical protein BACCOPRO_02638 [Bacteroides coprophilus DSM
18228]
gi|224019128|gb|EEF77126.1| hypothetical protein BACCOPRO_02638 [Bacteroides coprophilus DSM
18228]
Length = 872
Score = 365 bits (937), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 262/790 (33%), Positives = 378/790 (47%), Gaps = 103/790 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR SF+ +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTANEIRDSFVKFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V +SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++ A E+L
Sbjct: 61 VTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEVIGWAYEYLVTVLKL 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D LY T F GS + GL D+E W + P DHI NFWEMG TGPCG
Sbjct: 121 DPKD-LYVTVFEGSPEEGLARDDEAAGYWGQF-FPEDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D + E A VN D +IEIWN+VF+ + R + ++ PL IDTG+
Sbjct: 179 SEIHIDSRSEEEKAAVPGRELVNKDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV LQ KTS YDTD+F P+++ I +SG K YG + +D + R+++D+
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPIIKVIGDLSGKK-YG------DDEKVDVAMRVVADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++ D P A +R ++R A+ + KQ + K L + E +G Y
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYAYTFLGQKQAFMYK-LVPVLIENMGGAY 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ I+ ++ EE F LR L G++ L
Sbjct: 351 PELKAQQALIEKVMKEEEESF--LRT--------------------------LETGIRLL 382
Query: 425 TKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
K + A+ TEISG AFTLYDT+G ++ + + LT + FE ++ + KER
Sbjct: 383 EKTMNEAKAAGKTEISGVDAFTLYDTFGFPFDLTELILRENGLTADVKGFEAEMQKQKER 442
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
++ AA V D + LK T Y Y Y+T+ RY
Sbjct: 443 ARNAAA--VETGDWVTLKEGETTFVGYDYT-EYETSILRYR------------------- 480
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
++ ++ ++ T YA +GGQ+ D GV E
Sbjct: 481 ----------------QVKQKNQTLYQIVLSDTPFYAESGGQVGDTGV-----LVSEFET 519
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
++I + +H + P + VD R C H+ +HLL+ ALR+V
Sbjct: 520 IDIIDTKKENNLPIHITKKLPEHLDAPMMAC---VDTDKRAACAANHSCTHLLDEALRQV 576
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRHMRASE 720
L T QK V D DFS + + ++ + + VE +N I + + + R++ +
Sbjct: 577 LGTHVEQKGSLVTPDSLRFDFSHF-QKVTPEQLREVEHLVNAKIRENIPLTEYRNLPIEK 635
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
L + + GE Y D+V ++ S E C GTHV TG I +I S
Sbjct: 636 ARELGAIALF-GEKYGDEVRVVQFGS-----SIEFCGGTHVSATGKIGMVKIISESSVAA 689
Query: 781 GVRSIKCLTG 790
GVR I+ +TG
Sbjct: 690 GVRRIEAVTG 699
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 60/82 (73%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RV +SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++ A E+L
Sbjct: 93 LGNWSFGDYFKKEVIGWAYEYL 114
>gi|317475197|ref|ZP_07934464.1| tRNA synthetase class II [Bacteroides eggerthii 1_2_48FAA]
gi|316908650|gb|EFV30337.1| tRNA synthetase class II [Bacteroides eggerthii 1_2_48FAA]
Length = 873
Score = 365 bits (936), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 270/794 (34%), Positives = 381/794 (47%), Gaps = 111/794 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTANEIRDSFKSFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVLKL 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D LY T F GS + GL D E W + +P+DHI NFWEMG TGPCG
Sbjct: 121 DPKD-LYATVFEGSPEEGLERDNEAASYWEQF-LPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D + E P S L VN D +IEIWN+VF+ R + ++ L IDT
Sbjct: 179 SEIHVDSRSEEEKAKVPGSQL--VNKDHPQVIEIWNLVFMQFNRKADSSLEGLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV LQ KTS YDTD+F P+L+ I ++G T+ + + D+ + R+++D
Sbjct: 237 GMGFERLVRTLQGKTSNYDTDVFQPILKAIGDMAGT-----TYGVNEQQDI--AMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I E +G
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-ENMGG 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I ++ EE F LR L G++
Sbjct: 349 AYPELNVQKELIAKVIKEEEDSF--LRT--------------------------LETGIR 380
Query: 423 YLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K + A+ TEISG AFTLYDT+G ++ + + +T + F+ ++ + K
Sbjct: 381 LLDKTMADAKAAGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTADIKEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPD-IDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGD 538
+R++ AA D I L + T + YDY Y+T+ RY
Sbjct: 441 QRARNAAAVETGDWITLQE-----GTTEFVGYDYTEYETSILRYR--------------- 480
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
I+ ++ ++ DKT YA +GGQ+ D GV L N
Sbjct: 481 --------------------QIKQKNQTLYQIVLDKTPFYAESGGQVGDTGV--LVN--- 515
Query: 599 ENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
E +E+ + +H + P + VD R C H+ +HLL+AA
Sbjct: 516 EFETIEVIDTKKENNLPIHITKKLPEHLEAPMMAC---VDTDKRAACAANHSATHLLDAA 572
Query: 659 LRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHM 716
LR VL QK V SD DFS + + ++ + + VE +N I AN + R++
Sbjct: 573 LREVLGDHVEQKGSLVNSDSLRFDFSHF-QKVTDEEIRQVEHIVNAKIRANIPLKEYRNI 631
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
E L + + GE Y D V +I S E C GTHV TG+I ++
Sbjct: 632 PIEEAKELGAIALF-GEKYGDHVRVIQFGS-----SIEFCGGTHVAATGNIGMMKIVSES 685
Query: 777 SYNHGVRSIKCLTG 790
S GVR I+ TG
Sbjct: 686 SVAAGVRRIEAYTG 699
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|149277763|ref|ZP_01883903.1| alanine--tRNA ligase (alanyl-tRNA synthetase) [Pedobacter sp.
BAL39]
gi|149231451|gb|EDM36830.1| alanine--tRNA ligase (alanyl-tRNA synthetase) [Pedobacter sp.
BAL39]
Length = 900
Score = 365 bits (936), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 252/800 (31%), Positives = 400/800 (50%), Gaps = 81/800 (10%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K IR ++L +F + Q H +V S+PIV D ++ F N+GM QFK++FLG YPR
Sbjct: 1 MTAKEIRQAYLKFFESKQ-HHIVPSAPIVVKNDPTLMFTNAGMNQFKDLFLGEAAIKYPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ ++Q+C+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A + E LT+
Sbjct: 60 ITDTQRCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAIAWSWELLTE-VYR 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P D+LY + F G ++ GLP DEE ++W + VP + I K NFWEMG TGPCG
Sbjct: 119 IPKDKLYVSIFEGDEKEGLPRDEEAYELWKQF-VPEERIILGNKKDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGEPSSAL----ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D + + A + VNAD +IEIWN VF+ R+ ++ PL ++DTG+
Sbjct: 178 SEIHVDCRPDDERATVAGKSLVNADHPQVIEIWNNVFMQFNRLKDGSLQPLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV +LQ K S YDTD+F PL++ I A G + +TD+ + R+++D+
Sbjct: 238 GFERLVRVLQEKPSNYDTDVFQPLIQFI-----ASHAGVVYGADEKTDI--AMRVMADHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I+ +AD P A +R ++R A+ + +K+ + +L +A+ V+
Sbjct: 291 RAISFVIADGQLPSNNKAGYVIRRILRRAVRYAYTFLNLKE-PFLNQLVPVLADQFSGVF 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY- 423
E+ + +Q ++ EE F ++ ++ K Q + +M E + +
Sbjct: 350 DELVLQKDFVQKVVMEEEVSFLRTLATGIQRFENYTKKQADF----LMSENAIDTEKPFE 405
Query: 424 --LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
+ +D + ISGD AF L DTYG ++ + +A K + + + L + KE
Sbjct: 406 HPWVYSILKDQMV--ISGDFAFELNDTYGFPIDLTELMAREKNWVIDMKEYNTALLKQKE 463
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
RS+A A + D ++ H D LD+ VG F
Sbjct: 464 RSRAATAIDTGDWIVV----------------HGD----------LDSEFVGY----DDF 493
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
+ I++ + A + ++ KT YA +GGQ+ D G +++
Sbjct: 494 ETETQVIKYRKVNA-------KGREQYQIVLSKTPFYAESGGQVGDTG------RLEDHS 540
Query: 602 K---VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
+ VE+ + G IVH+ + + T +D RL HT +HLL+AA
Sbjct: 541 RLFSVEVTDTKKENGVIVHYTDTLPE---DLDGTFWAVIDEDKRLLSQDNHTATHLLHAA 597
Query: 659 LRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
L++VL T QK V + DFS + + +S + +AA+E +N + + + +
Sbjct: 598 LKKVLGTHVNQKGSLVNPEYLRFDFSHFAK-ISEEDLAAIEHLVNQKVRENIPLKEQRDV 656
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
+ + +T + GE Y + V +I D S+E C GTHV TG I +I +
Sbjct: 657 PYDQAISSGVTALFGEKYGELVRVITFDDH---YSKELCGGTHVQATGQIGYFKIISESA 713
Query: 778 YNHGVRSIKCLTGDSSKAAV 797
GVR I+ +T D ++A +
Sbjct: 714 VAAGVRRIEAITADKAEAFI 733
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++FLG YPR+ ++Q+C+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDLFLGEAAIKYPRITDTQRCLRVSGKHNDLEEVGIDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A + E LT+ +P D+LY +
Sbjct: 92 LGNWSFGDYFKKEAIAWSWELLTE-VYRIPKDKLYVS 127
>gi|218129222|ref|ZP_03458026.1| hypothetical protein BACEGG_00798 [Bacteroides eggerthii DSM 20697]
gi|217988600|gb|EEC54920.1| alanine--tRNA ligase [Bacteroides eggerthii DSM 20697]
Length = 873
Score = 365 bits (936), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 270/794 (34%), Positives = 381/794 (47%), Gaps = 111/794 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTANEIRDSFKSFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVLKL 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D LY T F GS + GL D E W + +P+DHI NFWEMG TGPCG
Sbjct: 121 DPKD-LYATVFEGSPEEGLERDNEAASYWEQF-LPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D + E P S L VN D +IEIWN+VF+ R + ++ L IDT
Sbjct: 179 SEIHVDSRSEEEKAKVPGSQL--VNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV LQ KTS YDTD+F P+L+ I ++G T+ + + D+ + R+++D
Sbjct: 237 GMGFERLVRTLQGKTSNYDTDVFQPILKAIGDMAGT-----TYGVNEQQDI--AMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I E +G
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-ENMGG 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I ++ EE F LR L G++
Sbjct: 349 AYPELNVQKELIAKVIKEEEDSF--LRT--------------------------LETGIR 380
Query: 423 YLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K + A+ TEISG AFTLYDT+G ++ + + +T + F+ ++ + K
Sbjct: 381 LLDKTMADAKAAGKTEISGKDAFTLYDTFGFPLDLTELILRENDMTADIKEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPD-IDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGD 538
+R++ AA D I L + T + YDY Y+T+ RY
Sbjct: 441 QRARNAAAVETGDWITLQE-----GTTEFVGYDYTEYETSILRYR--------------- 480
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
I+ ++ ++ DKT YA +GGQ+ D GV L N
Sbjct: 481 --------------------QIKQKNQTLYQIVLDKTPFYAESGGQVGDTGV--LVN--- 515
Query: 599 ENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
E +E+ + +H + P + VD R C H+ +HLL+AA
Sbjct: 516 EFETIEVIDTKKENNLPIHITKKLPEHLEAPMMAC---VDTDKRAACAANHSATHLLDAA 572
Query: 659 LRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHM 716
LR VL QK V SD DFS + + ++ + + VE +N I AN + R++
Sbjct: 573 LREVLGDHVEQKGSLVNSDSLRFDFSHF-QKVTDEEIRQVEHIVNAKIRANIPLKEYRNI 631
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
E L + + GE Y D V +I S E C GTHV TG+I ++
Sbjct: 632 PIEEAKELGAIALF-GEKYGDHVRVIQFGS-----SIEFCGGTHVAATGNIGMMKIVSES 685
Query: 777 SYNHGVRSIKCLTG 790
S GVR I+ TG
Sbjct: 686 SVAAGVRRIEAYTG 699
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|392396412|ref|YP_006433013.1| alanyl-tRNA synthetase [Flexibacter litoralis DSM 6794]
gi|390527490|gb|AFM03220.1| alanyl-tRNA synthetase [Flexibacter litoralis DSM 6794]
Length = 882
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 252/799 (31%), Positives = 395/799 (49%), Gaps = 105/799 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K +R +FL++F Q H +V S+P++P GD ++ F+NSGM QFK+ FLG P R
Sbjct: 1 MTAKEVRQTFLNFFQEKQ-HLIVDSAPLIPKGDATLMFINSGMAQFKDYFLGNGIPPSTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ ++QKC+RV GKHNDL G D+YHHTFFEMLGNWSF DY+K++A A E LT+
Sbjct: 60 ITDTQKCLRVSGKHNDLDDVGIDTYHHTFFEMLGNWSFGDYFKQEALPWAWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP +RLY T F G+ + LP D E+ ++W ++ D I K NFWEMG GPCG S
Sbjct: 119 LPKERLYVTVFEGNKEDNLPLDIESFEVWKQILGSEDRIIYGNKKDNFWEMGEVGPCGPS 178
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + VN D +IEIWN VF+ +R + ++V L ++DTG+
Sbjct: 179 SEIHIDLRTDAERKKVDGKTLVNGDHPQVIEIWNNVFMEFERKANKSLVKLPSQHVDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV ++ K S YDTD+F PL++T+E +SG ++ +TD+ + R+++D+
Sbjct: 239 GFERLVRAIEGKQSNYDTDVFTPLIKTVEAISGI-----SYGVEEKTDI--AIRVIADHI 291
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I+ +AD P + +R ++R A+ +K+ L EL + +AE D +
Sbjct: 292 RAISFVIADGQLPSNNKQGYVVRRILRRAVRYGYTYLDLKEPFLF-ELVHILAEQFDDTF 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ + + ++ EE F + +K ++ VK
Sbjct: 351 PELDAQKDFVARVVKEEENSFLRTLENGIKRFEE----------------------VKNR 388
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
TK+ I G F LYDT+G ++ +A + + E F + LN+ K+RS+
Sbjct: 389 TKE-------NLIDGQDVFELYDTFGFPDDLTDLMAREAGMKIDIEGFTKALNQQKKRSQ 441
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
A+S D H D+ + D+ YDT
Sbjct: 442 KDASSEKSDW------HEIQKDESVRVDFLGYDT------------------------LQ 471
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ-ENGK 602
K I R I + + ++ ++T YA +GGQ+ D G Y+ N + E+GK
Sbjct: 472 AKAKIIRWR------EITKKGKTFYQIVLNQTPFYAESGGQVGDRG--YIQNLDKNEDGK 523
Query: 603 VEIGELASLEGK---IVHFGNVVSSFKVTPGLTSRVE--VDARMRLGCMRAHTTSHLLNA 657
E + + + IVH + K+ T+ + V +R H+ +HLL+A
Sbjct: 524 GEKISIIDTQKENDLIVHI-----TKKLPSDFTANYQAIVSENLRCSTENNHSATHLLHA 578
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL T Q+ V D DFS + + ++ + + +E +N I +++ + M
Sbjct: 579 ALREVLGTHVQQRGSLVSEDILRFDFSHFSK-MTDEEIEKIETIVNQKIRENIEL--QEM 635
Query: 717 RASELPFLTHLTVIP--GEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
R + + + + GE Y + V ++ K +V E C GTHV TG I +I
Sbjct: 636 RNTPIEEAKEMGAMALFGEKYGNSVRVVMFDKKYSV---ELCGGTHVSATGKIGFFKIIS 692
Query: 775 YKSYNHGVRSIKCLTGDSS 793
S GVR ++ LTG+ +
Sbjct: 693 ESSVASGVRRLEALTGEKA 711
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP GD ++ F+NSGM QFK+ FLG P R+ ++QKC+RV GKHNDL G D+YHHT
Sbjct: 28 IPKGDATLMFINSGMAQFKDYFLGNGIPPSTRITDTQKCLRVSGKHNDLDDVGIDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DY+K++A A E LT+ LP +RLY T
Sbjct: 88 FFEMLGNWSFGDYFKQEALPWAWELLTE-VYKLPKERLYVT 127
>gi|346973803|gb|EGY17255.1| alanyl-tRNA synthetase [Verticillium dahliae VdLs.17]
Length = 958
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 252/848 (29%), Positives = 398/848 (46%), Gaps = 111/848 (13%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP 70
+ + +R +F+ +F +GHT+V SS +VP+ D ++ F N+GM QFK++FLG P
Sbjct: 6 KWPAAKVRETFIKFF-EERGHTVVPSSSVVPHNDPTLLFTNAGMNQFKSIFLGTIAQSDP 64
Query: 71 -----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSF--NDYYKRDACRMALE 123
R ++QK +R GGK +DL G DSYHH+FFEMLGNWSF DY+K+DA + + E
Sbjct: 65 MYGLKRATDTQKVIRAGGKASDLEDVGHDSYHHSFFEMLGNWSFGPQDYFKKDAIKYSWE 124
Query: 124 FLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMG 183
F+T+ + L DRLY TYF G GL D E++++W +GVP HI N+W MG
Sbjct: 125 FMTET-LGLEKDRLYVTYFEGDPAQGLEPDLESKELWKSVGVPESHILPGSKADNWWSMG 183
Query: 184 STGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYI 243
TGPCG SE+HYD G A VN D ++E+WN V++++ R + ++ PL ++
Sbjct: 184 DTGPCGPCSELHYDKIGGRDVAHL-VNKDDPMVVELWNNVWMAYDRRADQSLTPLPAQHV 242
Query: 244 DTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRML 303
DTG+GFERLV LQ+ +S Y TD++ P I++V+G +PY + + +DT+YR
Sbjct: 243 DTGMGFERLVAALQDVSSNYATDIWSPYFRKIQEVTGTRPYTDKYGAEDPETIDTAYRAC 302
Query: 304 SDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL 360
+D+ RM+ A+AD P+ + +R V+R + + G + + + +
Sbjct: 303 ADHIRMLGFAIADGAVPNNEGRGYVVRRVLRRGARYARKYLNAEIGTFFSRVLPTLIDEM 362
Query: 361 GDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF-NIMEEPGLVL 419
G +PE+ I+ IL EE F K L + + + ++F E+ GL
Sbjct: 363 GQQFPELVKKQYDIKEILDEEEEAFA----------KTLDRGEAQFQKFAGAAEKKGL-- 410
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
++SG + LYDTYG ++ Q +A + L + E E K+ +
Sbjct: 411 ---------------KKLSGAEVWKLYDTYGFPVDLTQLMAEERGLQIDDE--EVKVAQE 453
Query: 480 KERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
K R +K+ + + TFP LD + + +
Sbjct: 454 KAREASKSVKSAIE-----------------------------TFPKLDVHGIAELEQQH 484
Query: 540 VFCIDKHAIRHARSGASIDSIQL--------------EHNAWVGLIFDKTNLYATAGGQI 585
A ++ + G S +QL N + +I DKTN YA AGGQ+
Sbjct: 485 QIARTNDADKYVK-GDSKGKVQLIFDGKGFVKSTKDIAENTPISVILDKTNFYAEAGGQV 543
Query: 586 DDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
D G + + + ++ ++ S G I+H G + S ++ G E D R
Sbjct: 544 ADTGRLVIDESVE----FKVLDVQSYGGYILHHG-YIESGTLSSGDEVICEYDELRRSPI 598
Query: 646 MRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
HT +H+LN ALR VL QK V + DFS + + + + + +E+ N+
Sbjct: 599 RNNHTGTHILNHALREVLGEDVNQKGSLVDDGKLRFDFS-HKKGVEIPELKKIEELSNEY 657
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPD------------DVILIDISDKENVIS 752
I +V + + + L + GE YP+ D++ + IS
Sbjct: 658 IRKNQKVYAEDVELEKAREIDTLRAVFGETYPNPVRVVSVGVPVKDLLENPKKPEWRNIS 717
Query: 753 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQI 812
E C GTHV TGHI+ ++ G+R I TGD++ L+ Q+
Sbjct: 718 VEFCGGTHVEQTGHIKDLVIVEESGIAKGIRRIIAFTGDAAHQVQREATELA-----RQL 772
Query: 813 LNVGNIPY 820
V +PY
Sbjct: 773 DIVEALPY 780
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 72/109 (66%), Gaps = 8/109 (7%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK++FLG P R ++QK IR GGK +DL G D
Sbjct: 34 VPHNDPTLLFTNAGMNQFKSIFLGTIAQSDPMYGLKRATDTQKVIRAGGKASDLEDVGHD 93
Query: 873 SYHHTFFEMLGNWSF--NDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHH+FFEMLGNWSF DY+K+DA + + EF+T+ + L DRLY T+
Sbjct: 94 SYHHSFFEMLGNWSFGPQDYFKKDAIKYSWEFMTE-TLGLEKDRLYVTY 141
>gi|323452905|gb|EGB08778.1| hypothetical protein AURANDRAFT_53556 [Aureococcus anophagefferens]
Length = 1031
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 261/851 (30%), Positives = 382/851 (44%), Gaps = 139/851 (16%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGL--------- 64
+K IR +F+ +GHT SS +VP+ D ++ F N+GM Q+K++FLGL
Sbjct: 29 AKKIRDTFVQRAGGARGHTHWPSSSVVPHEDPTLLFANAGMNQYKSIFLGLAPRRKRRRA 88
Query: 65 ------TPAPYP----------------RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFE 102
TP P P R NSQKC+R GGKHNDL G+D YHHTFFE
Sbjct: 89 TPDDYNTPLPIPSFGGTIDPKTKMATLKRACNSQKCIRAGGKHNDLDDVGKDLYHHTFFE 148
Query: 103 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGS--DQYGLPCDEETRDIW 160
MLGNWSF DY+K +A RMA E LT L DRLY TYFGG G+P DEETR IW
Sbjct: 149 MLGNWSFGDYFKEEAIRMAWECLTV-EFQLDPDRLYVTYFGGDALKAPGVPSDEETRQIW 207
Query: 161 LELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIW 220
L+ VP + + NFWEMG TGPCG +EIHYD G +A A VN D D+IEIW
Sbjct: 208 LKY-VPAERVLPFDAGDNFWEMGDTGPCGPCTEIHYDRVGGRDAA-ALVNMDDPDVIEIW 265
Query: 221 NIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSG 280
N VFI + R + L ++DTG+GFERL +ILQ + S YDTD+F PL I+ VSG
Sbjct: 266 NNVFIQYNR-DKFGLKELPAQHVDTGMGFERLASILQGQMSNYDTDIFTPLFAEIQAVSG 324
Query: 281 AK-PYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLI 336
Y ++ D +YR+++D+ R +T A+ D PD + LR V+R A+
Sbjct: 325 CPVAYAGKIGDEDKETKDMAYRVVADHVRTLTFAITDGAVPDTQGRGYVLRRVLRRAVWY 384
Query: 337 SEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEW 396
+ +G V +L + E+LG+ +PEI + + + +L E R F+
Sbjct: 385 GQHFLGAPKG-FVYKLVPKLCEVLGEAFPEIVKAKDTVMAVLEGEERDFNRT-------- 435
Query: 397 KPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNII 456
+ G ++ KQ + P G AF L + G ++
Sbjct: 436 --------------------IDKGARFFNKQAEKLPKGAPFPGSDAFVLSGSLGFPLDLC 475
Query: 457 QELAAAKKLTLCHEAFEQKLNELKER-------------SKAKAASNVPDIDLMDLKHFP 503
+ +A + +T+ + L E +++ + A + P
Sbjct: 476 EIMAEERGMTVDVAGYHAALKEEQDKNAAALAKRKAARSAGADMTCAAEQTAALAAAGAP 535
Query: 504 VTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLE 563
T+ + KY ++ +K V + + +D++
Sbjct: 536 KTESEGKYVWNARPAAK-------------------VVALYVGKGGGPKGDGLVDAVDPS 576
Query: 564 HNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV-EIGELASLEGKIVHFGNVV 622
+A G + D T+ YA GGQ+ D G +++ K+ ++ ++ G +VH G +
Sbjct: 577 KHAVAGAVLDATSFYAEMGGQVYDTGA-----LLKDDAKILDVEDVQVYGGYVVHVGAPL 631
Query: 623 SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQKSC----RVFSDEC 678
KV + V+ D R+R+ HT +H+LN ALR VL + + + D C
Sbjct: 632 GPLKVGDDVACAVDYDRRVRVA--PNHTMTHVLNFALREVLLGGSEGAKADAEKTGVDRC 689
Query: 679 A------------LDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTH 726
A DF+ + L+ D + AVE +N+ IA + VD +
Sbjct: 690 AQRGSYVDDERLRFDFA-WDAPLTADQLKAVEAIVNETIAAGLVVDAVETPLDAAMAVES 748
Query: 727 LTVIPGEIYPD------------DVILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
L + GE YPD DV+ +S E C GTHV NT ++
Sbjct: 749 LRAMKGEAYPDPVRVVAVGAPVADVVAAPCGAAWRGMSVELCGGTHVRNTKDAVGFALLE 808
Query: 775 YKSYNHGVRSI 785
GVR +
Sbjct: 809 ENGIAKGVRRV 819
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 75/133 (56%), Gaps = 32/133 (24%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGL---------------TPAPYP-------------- 848
+P+ D ++ F N+GM Q+K++FLGL TP P P
Sbjct: 55 VPHEDPTLLFANAGMNQYKSIFLGLAPRRKRRRATPDDYNTPLPIPSFGGTIDPKTKMAT 114
Query: 849 --RVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 906
R NSQKCIR GGKHNDL G+D YHHTFFEMLGNWSF DY+K +A RMA E LT
Sbjct: 115 LKRACNSQKCIRAGGKHNDLDDVGKDLYHHTFFEMLGNWSFGDYFKEEAIRMAWECLTV- 173
Query: 907 PVSLPLDRLYFTF 919
L DRLY T+
Sbjct: 174 EFQLDPDRLYVTY 186
>gi|347753748|ref|YP_004861312.1| alanyl-tRNA synthetase [Candidatus Chloracidobacterium thermophilum
B]
gi|347586266|gb|AEP10796.1| alanyl-tRNA synthetase [Candidatus Chloracidobacterium thermophilum
B]
Length = 876
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 262/798 (32%), Positives = 386/798 (48%), Gaps = 113/798 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L IR FLDYF GH +VKSSP++P DD++ F N+GM QFK+VF G Y R
Sbjct: 2 LTGHDIRHRFLDYFAR-HGHRIVKSSPVLP-PDDTLLFTNAGMNQFKDVFTGRETRDYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A+SQKC+R GGKHNDL G+ + HHTFFEMLGN+SF DY+K +A A E L +
Sbjct: 60 AASSQKCIRAGGKHNDLEEVGKTARHHTFFEMLGNFSFGDYFKEEAIAFAWELLLR-EFE 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LPL+RL+FT + D+E +W ++G P D I + G K NFW+MG TGPCG
Sbjct: 119 LPLERLWFTVY--------EDDDEAFALWKKVGAPADRILRFGKKENFWQMGETGPCGPC 170
Query: 192 SEIHYDMKGEPSSALAR-VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIHY + + + VN + +EIWN+VF+ +R + T+ PL K +DTG G E
Sbjct: 171 SEIHYFLGDDLADNRPEYVNGPGDTTVEIWNLVFMQFERFADGTLKPLPKPSVDTGAGLE 230
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RL ++LQ K + YDTDL LP++E I +G KPY + + + S R+++D++R
Sbjct: 231 RLASVLQGKKTNYDTDLILPIIEQIAARAG-KPY--HYDSPD----GISMRVIADHARAT 283
Query: 311 TVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLVKELSYNIAEILGD 362
++AD ++P T + LR ++R A+ L +++F + +++ + +
Sbjct: 284 AFSIADGIYPGNTGRNYVLRKIMRRAIWHGRRLGIDNLF-------LHDITAFVVAHMAT 336
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE+Q I ++ E ++F A K E F E+ GV
Sbjct: 337 AFPELQTQAEVIARVVTTEEKLFSTTLAAGRKRLD---------EAFRRAEQ-----GV- 381
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+SG AF LY TYGL ++I +A + L + FE L E + R
Sbjct: 382 --------------VSGADAFDLYQTYGLPLDLIAYIAEQRGLRVDEAGFEAALAEERIR 427
Query: 483 S----KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
+ K AA V L P Y + + P L V
Sbjct: 428 ARESWKGGAAKAVAPAYQAALDGRPTVFRGYDH----------LSLPDLRVRAV------ 471
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
R G ++ ++ V + D+T YA +GGQ+ D G+ L N
Sbjct: 472 ------------IRQGELVEVLRAGETGEV--VLDETPFYAESGGQVGDTGL--LEN--- 512
Query: 599 ENGKVEIGE-LASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
E + + + +A + G IVH V+ + +T+ V+ D R R M H+ +HLL+
Sbjct: 513 EAATLRVTDTVAPVTGLIVHRVEVLRGEVRANDQVTATVDADRRRR--TMLNHSATHLLH 570
Query: 657 AALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
AALR VL Q V D+ DF+ Y LS D +A +E+ +N I Q+ +R
Sbjct: 571 AALREVLGAHVRQAGSEVAPDKLRFDFTHYA-ALSADEIAEIERLVNAQIRRNAQLAKRE 629
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
M A + + GE Y D V ++++ S E C GTHV TG I +I
Sbjct: 630 M-ALDTAVAAGAIALFGEKYGDVVRVVEVPG----FSMELCGGTHVTATGDIGLFKIISE 684
Query: 776 KSYNHGVRSIKCLTGDSS 793
S GVR I +TG+++
Sbjct: 685 SSIAAGVRRIVAVTGEAA 702
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
DD++ F N+GM QFK+VF G Y R A+SQKCIR GGKHNDL G+ + HHTFFEM
Sbjct: 32 DDTLLFTNAGMNQFKDVFTGRETRDYTRAASSQKCIRAGGKHNDLEEVGKTARHHTFFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGN+SF DY+K +A A E L + LPL+RL+FT
Sbjct: 92 LGNFSFGDYFKEEAIAFAWELLLR-EFELPLERLWFT 127
>gi|423342878|ref|ZP_17320592.1| alanyl-tRNA synthetase [Parabacteroides johnsonii CL02T12C29]
gi|409217133|gb|EKN10112.1| alanyl-tRNA synthetase [Parabacteroides johnsonii CL02T12C29]
Length = 875
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 264/801 (32%), Positives = 394/801 (49%), Gaps = 117/801 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF D+F + Q H +V S+P+V GD ++ F N+GM QFK++ LG P YPR
Sbjct: 2 LTAKEIRESFKDFFASKQ-HQIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNVPRKYPR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKQEAINWAWEYLVDV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +RLY T F GS GL D+E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPERLYATVFEGSPAEGLSRDDEAAGYW-EKFLPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E A VN D +IEIWN+VF+ + R + ++ PL IDTG+
Sbjct: 179 SEIHIDLRSEEERAAIPGQDMVNKDHPQVIEIWNLVFMQYNRKADSSLEPLPARVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F P+++ I ++G YG+ D + R+++D+
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPIIKVIADMAGTS-YGKD------KQQDVAMRVIADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I A+ D P A +R ++R A+ K+ + K L I E +GD Y
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLDRKESFMYKLLPVLI-ETMGDAY 350
Query: 365 PEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
PE+ Q ++ + + EES ++T L G++
Sbjct: 351 PELIAQKTLIEKVIKEEEES----------------FLRT--------------LETGIR 380
Query: 423 YLTKQLARDPSITE--ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL- 479
L K++ + + ISG AFTLYDTYG ++ + L L E ++E
Sbjct: 381 LLDKKMEETKAAGKNVISGVDAFTLYDTYGFPLDLTE-------LILRENGMEANIDEFD 433
Query: 480 ----KERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
K++ +A+ A+ + D + LK N VG
Sbjct: 434 VEMQKQKDRARNAAAIETGDWVVLKEG-------------------------GCNFVGY- 467
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
+F D +R+ + I+ ++ ++ D+T YA GGQ+ D G +
Sbjct: 468 ---DLFECDAEILRYRQ-------IKQKNKVLYQIVLDQTPFYAEMGGQVGDTGWLIADD 517
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T +++ + VH +V+ +T +++ + R+ C H+ +HLL
Sbjct: 518 ET-----IDVIDTKRENNLPVH---LVAKLPKDVTVTFTAKINEKKRIQCECNHSATHLL 569
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDR 713
+ ALR VL T QK V D DFS + + ++ + + VEK +++ I AN +
Sbjct: 570 HEALREVLGTHVEQKGSYVSPDSLRFDFSHF-QKVTDEEIRKVEKLVSEKIRANYPLEEH 628
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
R+M +E L + + GE Y D+V ++ + S E C GTH+ TG I S V+
Sbjct: 629 RNMPIAEAKALGAMALF-GEKYGDEVRVVKYGN-----SIELCGGTHIPATGMIGSLRVV 682
Query: 774 GYKSYNHGVRSIKCLTGDSSK 794
G S GVR I+ +T + ++
Sbjct: 683 GESSIAAGVRRIEAVTAEGAE 703
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++ LG P YPRVA+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 32 GDPTLMFTNAGMNQFKDIILGNVPRKYPRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 91
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K++A A E+L + L +RLY T
Sbjct: 92 MLGNWSFGDYFKQEAINWAWEYLVD-VLKLNPERLYAT 128
>gi|395803303|ref|ZP_10482551.1| alanyl-tRNA ligase [Flavobacterium sp. F52]
gi|395434615|gb|EJG00561.1| alanyl-tRNA ligase [Flavobacterium sp. F52]
Length = 879
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 262/823 (31%), Positives = 391/823 (47%), Gaps = 121/823 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ +R FLD+F ++GHT+V S+PIV D ++ F NSGM QFK FLG PR
Sbjct: 1 MKSQDVRKQFLDFF-ESKGHTIVPSAPIVLKDDPTLMFNNSGMAQFKEFFLGNGTPKSPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 IADTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAINWAWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY + F GS + +P D+E DIW L + D I K NFWEMG GPCG
Sbjct: 119 IPKENLYVSVFEGSKEDNVPFDQEAWDIWKTL-IDEDRIILGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E AL VN D ++EIWN VF+ R + ++ L ++DTG+
Sbjct: 178 SEIHVDLRPEEEKALVSGKSLVNNDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFT--TSNRTDLDTSYRMLSD 305
GFERL LQ KTS YDTD+F+PL+ IE ++GAK T + + ++ + R+++D
Sbjct: 238 GFERLCMALQGKTSNYDTDVFMPLIREIETITGAKYTTNDVTGISEEQNKMNIAIRVVAD 297
Query: 306 YSRMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+ R + A+AD P T + + + F + + +L ++E +GD
Sbjct: 298 HVRAVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLGTKEPFIFKLVETLSEQMGDS 357
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PEI+ ++ EE F +KT L+Q GLVL
Sbjct: 358 FPEIRTQKALCSNVIREEENSF--------------LKT---LDQ-------GLVL---- 389
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L ++ + + T + G AF LYDTYG ++ + + + L L E F+++L KERS
Sbjct: 390 LDAVISNNNTDT-VDGKKAFELYDTYGFPIDLTALILSERGLKLDEEGFQEQLQLQKERS 448
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+A + D +++ V DD ++ YD S+ QV
Sbjct: 449 RAASKVTAGDWNVI------VEDDIQEF-VGYDRLSQ------------------QVKIT 483
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTN 595
+ A+ G L+F+ T Y +GGQ D G + Y+ +
Sbjct: 484 KYRRVESAKDGEIFQ-----------LVFNATPFYGESGGQTGDKGYLEAQNGDIVYIID 532
Query: 596 TTQENGKVEIGELASLEGKIVHFG-----NVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
T +EN + +H N+ +F VDA R H+
Sbjct: 533 TKKENNQT------------IHLAKSLPENLTGTFNAV--------VDANQRAKTSSNHS 572
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+HLL+ ALR++L T QK V + DFS + + +S + + VE ++N I +
Sbjct: 573 ATHLLHQALRKILGTHIEQKGSMVRNASLRFDFSHFAK-VSDEELVEVENFVNARIRESL 631
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIES 769
+ + E + GE Y D V I D S E C GTHV NT I
Sbjct: 632 PLIEKRAIPKEQALEEGAIALFGEKYGDLVRTIKFGD-----SVELCGGTHVANTSDIWH 686
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQI 812
+I + G+R I+ +T +++K E S A S ++I
Sbjct: 687 FKIISEGAVAAGIRRIEAITSEAAKEYFE-----SQAVSLAEI 724
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK FLG PR+A++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFNNSGMAQFKEFFLGNGTPKSPRIADTQKCLRVSGKHNDLEEVGIDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ +P + LY +
Sbjct: 92 LGNWSFGDYFKKEAINWAWELLTE-VYKIPKENLYVS 127
>gi|218258080|ref|ZP_03474507.1| hypothetical protein PRABACTJOHN_00161 [Parabacteroides johnsonii
DSM 18315]
gi|218225799|gb|EEC98449.1| hypothetical protein PRABACTJOHN_00161 [Parabacteroides johnsonii
DSM 18315]
Length = 875
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 264/801 (32%), Positives = 394/801 (49%), Gaps = 117/801 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF D+F + Q H +V S+P+V GD ++ F N+GM QFK++ LG P YPR
Sbjct: 2 LTAKEIRESFKDFFASKQ-HQIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNVPRKYPR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKQEAINWAWEYLVDV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +RLY T F GS GL D+E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPERLYATVFEGSPAEGLSRDDEAAGYW-EKFLPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E A VN D +IEIWN+VF+ + R + ++ PL IDTG+
Sbjct: 179 SEIHIDLRSEEERAAIPGQDMVNKDHPQVIEIWNLVFMQYNRKADSSLEPLPARVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F P+++ I ++G YG+ D + R+++D+
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPIIKVIADMAGTS-YGKD------KQQDVAMRVIADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I A+ D P A +R ++R A+ K+ + K L I E +GD Y
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLDRKESFMYKLLPVLI-ETMGDAY 350
Query: 365 PEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
PE+ Q ++ + + EES ++T L G++
Sbjct: 351 PELIAQKTLIEKVIKEEEES----------------FLRT--------------LETGIR 380
Query: 423 YLTKQLARDPSITE--ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL- 479
L K++ + + ISG AFTLYDTYG ++ + L L E ++E
Sbjct: 381 LLDKKMEETKAAGKNVISGVDAFTLYDTYGFPLDLTE-------LILRENGMEANIDEFD 433
Query: 480 ----KERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
K++ +A+ A+ + D + LK N VG
Sbjct: 434 VEMQKQKDRARNAAVIETGDWVVLKEG-------------------------GCNFVGY- 467
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
+F D +R+ + I+ ++ ++ D+T YA GGQ+ D G +
Sbjct: 468 ---DLFECDAEILRYRQ-------IKQKNKVLYQIVLDQTPFYAEMGGQVGDTGWLIADD 517
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T +++ + VH +V+ +T +++ + R+ C H+ +HLL
Sbjct: 518 ET-----IDVIDTKRENNLPVH---LVAKLPKDVTVTFTAKINEKKRIQCECNHSATHLL 569
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDR 713
+ ALR VL T QK V D DFS + + ++ + + VEK +++ I AN +
Sbjct: 570 HEALREVLGTHVEQKGSYVSPDSLRFDFSHF-QKVTDEEIRKVEKLVSEKIRANYPLEEH 628
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
R+M +E L + + GE Y D+V ++ + S E C GTH+ TG I S V+
Sbjct: 629 RNMPIAEAKALGAMALF-GEKYGDEVRVVKYGN-----SIELCGGTHIPATGMIGSLRVV 682
Query: 774 GYKSYNHGVRSIKCLTGDSSK 794
G S GVR I+ +T + ++
Sbjct: 683 GESSIAAGVRRIEAVTAEGAE 703
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++ LG P YPRVA+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 32 GDPTLMFTNAGMNQFKDIILGNVPRKYPRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 91
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K++A A E+L + L +RLY T
Sbjct: 92 MLGNWSFGDYFKQEAINWAWEYLVD-VLKLNPERLYAT 128
>gi|228471913|ref|ZP_04056683.1| alanine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
gi|228276765|gb|EEK15471.1| alanine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
Length = 877
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 246/793 (31%), Positives = 375/793 (47%), Gaps = 104/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FL +F ++GH +V S+P+V D ++ F N+GM QFK FLG R
Sbjct: 1 MTSQEIRELFLKFF-ESKGHVIVPSAPMVIKNDPTLMFTNAGMNQFKEFFLGNAKPKQKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V ++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+KR+A A E LT+
Sbjct: 60 VVDTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKREAITWAWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F GS + G+P D+E DIW E + DHI K NFWEMG GPCG
Sbjct: 119 IPKENLYVTVFEGSPEEGVPFDQEAYDIWKER-IAEDHILLGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMK--GEPSSALAR--VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ GE + R VN D +IEIWN VF+ R + ++ L +DTG+
Sbjct: 178 SEIHVDIRSDGEKAKVAGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPAQNVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ K S YDTD+F PL+ +E+++ + T + ++ + R++SD+
Sbjct: 238 GFERLCMVLQGKQSNYDTDVFTPLIHKVEEITKTRYTNGIQLTPEQEQINIAIRVISDHI 297
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R ++ A+AD P + + + + F ++ + +L + + +G +P
Sbjct: 298 RAVSFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLGQKEPFIYKLVETLTKQMGGTFP 357
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ I ++ EE F +E+ L+L V
Sbjct: 358 ELEKEFLLIVSVIKEEEASF-----------------------LRTLEQGLLMLDV---- 390
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ ++ S ++SG AF LYDTYG K++ + + + +TL +FE+ L + KERS+A
Sbjct: 391 --MIQNASDKQLSGSKAFELYDTYGFPKDLTALILSERGMTLDEASFEEHLQKQKERSRA 448
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A D ++ DD+ + YDT + V +
Sbjct: 449 AAQVKAGDWVVL-------RDDEEEEFIGYDT------------------LEAMVRLVKY 483
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
+ + G L+F+ T Y GGQ+ D G + Y+T+T
Sbjct: 484 RKVESQKDGTLYQ-----------LVFNTTPFYPEGGGQVGDRGTLQAANGELIYITDTK 532
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+EN I+H + P + EV R H+ +HLL+
Sbjct: 533 KEN------------NLIIHIAEHLPENLNDP---FKAEVHPMGRALAQSNHSATHLLHQ 577
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL T QK V + DFS + + L+ + + VE+ +N I ++ ++
Sbjct: 578 ALREVLGTHVEQKGSHVSPEALRFDFSHFAK-LTPEELTEVERLVNKRIYEKIPLEEHRN 636
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + GE Y + V +I + SRE C GTHV NTG I ++
Sbjct: 637 IPIQQALEAGAMALFGEKYGEKVRMIQFGE-----SRELCGGTHVKNTGDIWFFKIVSEG 691
Query: 777 SYNHGVRSIKCLT 789
+ GVR I+ +T
Sbjct: 692 AVAAGVRRIEAIT 704
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG RV ++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEFFLGNAKPKQKRVVDTQKCLRVSGKHNDLEEVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+KR+A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGDYFKREAITWAWELLTE-VYKIPKENLYVT 127
>gi|154493963|ref|ZP_02033283.1| hypothetical protein PARMER_03308 [Parabacteroides merdae ATCC
43184]
gi|423722698|ref|ZP_17696851.1| alanyl-tRNA synthetase [Parabacteroides merdae CL09T00C40]
gi|154086223|gb|EDN85268.1| alanine--tRNA ligase [Parabacteroides merdae ATCC 43184]
gi|409241971|gb|EKN34736.1| alanyl-tRNA synthetase [Parabacteroides merdae CL09T00C40]
Length = 875
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 266/801 (33%), Positives = 395/801 (49%), Gaps = 117/801 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF D+F + Q H +V S+P+V GD ++ F N+GM QFK++ LG P YPR
Sbjct: 2 LTAKEIRESFKDFFASKQ-HQIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNVPRKYPR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKQEAINWAWEYLVEV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY T F GS GL D+E W E +P+ HI NFWEMG TGPCG
Sbjct: 120 LNPDRLYATVFEGSPAEGLSRDDEAAGYW-EKFLPKAHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E A VN D +IEIWN+VF+ + R + ++ PL IDTG+
Sbjct: 179 SEIHIDLRPEEERAAIPGQDMVNKDHPQVIEIWNLVFMQYNRKADGSLEPLPARVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F P+++ I ++G YG+ D + R+++D+
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPIIKVIADMAGT-AYGKD------KQQDVAMRVIADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I A+ D P A +R ++R A+ K+ + K L I E +GD Y
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLDRKESFMYKLLPVLI-ETMGDAY 350
Query: 365 PEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
PE+ Q ++ + + EES ++T L G++
Sbjct: 351 PELIAQKTLIEKVIKEEEES----------------FLRT--------------LETGIR 380
Query: 423 YLTKQLARDPSITE--ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL- 479
L K++ + + ISG AFTLYDTYG ++ + L L E ++E
Sbjct: 381 LLDKKMEETKAAGKNVISGVDAFTLYDTYGFPLDLTE-------LILRENGMEANIDEFN 433
Query: 480 ----KERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
K++ +A+ A+ + D + LK N VG
Sbjct: 434 VEMQKQKDRARNAAAIETGDWVVLKEG-------------------------GCNFVGY- 467
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
+F D +R+ + I+ ++ ++ D+T YA GGQ+ D G +
Sbjct: 468 ---DLFECDAEILRYRQ-------IKQKNKVLYQIVLDQTPFYAEMGGQVGDTGWLIADD 517
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T V++ + VH + VT T++ ++ + R+ C H+ +HLL
Sbjct: 518 ET-----VDVIDTKRENNLPVHLVTKLPK-DVTATFTAK--INEKKRIQCECNHSATHLL 569
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDR 713
+ ALR VL T QK V D DFS + + ++ + + VEK +++ I AN +
Sbjct: 570 HEALREVLGTHVEQKGSYVSPDSLRFDFSHF-QKVTDEEIRKVEKLVSEKIRANYPLEEH 628
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
R+M +E L + + GE Y D+V ++ + S E C GTH+ TG I S V+
Sbjct: 629 RNMPIAEAKALGAMALF-GEKYGDEVRVVKYGN-----SIELCGGTHIPATGMIGSLRVV 682
Query: 774 GYKSYNHGVRSIKCLTGDSSK 794
G S GVR I+ +T ++++
Sbjct: 683 GESSIAAGVRRIEAVTAEAAE 703
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++ LG P YPRVA+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 32 GDPTLMFTNAGMNQFKDIILGNVPRKYPRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 91
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K++A A E+L + + L DRLY T
Sbjct: 92 MLGNWSFGDYFKQEAINWAWEYLVE-VLKLNPDRLYAT 128
>gi|60680248|ref|YP_210392.1| alanyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
gi|81316682|sp|Q5LHE6.1|SYA_BACFN RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|60491682|emb|CAH06434.1| putative alanyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
Length = 872
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 265/793 (33%), Positives = 382/793 (48%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K R SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKETRDSFKNFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYHR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLERDNEAASYW-EQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + T+ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSTLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F PL++ I +++G + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPLIKAIAQMAGTE-YGKNEQN------DIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +GD
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DSMGD 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ A KE V + E +E G++
Sbjct: 349 AYPEL-----------------------IAQKELIEKVIKEEEESFLRTLE-----TGIR 380
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K +A + TEISG AFTLYDT+G ++ + + +T+ E F+ ++ + K
Sbjct: 381 LLDKTMADTKANGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNVEEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA D ++ T + YDY Y+T+ RY
Sbjct: 441 QRARNAAAIETGDWIILK----EGTTEFVGYDYTEYETSILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
++ ++ ++ D T YA +GGQ+ D GV L N E
Sbjct: 481 -------------------QVKQKNQTLYQIVLDYTPFYAESGGQVGDTGV--LVN---E 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + P + VD R C H+ +HLL+ AL
Sbjct: 517 FETIEVIDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDEAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEELRKVEHLVNAKIRANVPLQEHRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y D V +I S E C GTHV TG+I +I S
Sbjct: 633 IEEAKELGAIALF-GEKYGDHVRVIQFGS-----SIEFCGGTHVAATGNIGMVKIISESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYHRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|385808621|ref|YP_005845017.1| alanyl-tRNA synthetase [Ignavibacterium album JCM 16511]
gi|383800669|gb|AFH47749.1| Alanyl-tRNA synthetase [Ignavibacterium album JCM 16511]
Length = 862
Score = 362 bits (930), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 256/790 (32%), Positives = 388/790 (49%), Gaps = 106/790 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FLD+F ++ H +V SSP+VP+ D ++ F N+GM QFK+VFLG Y R
Sbjct: 1 MTSQEIRQQFLDFF-RSKDHRIVPSSPVVPFDDPTLLFTNAGMNQFKDVFLGTGTREYKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
AN+QKC+RV GKHNDL G D+YHHTFFEMLGNWSF DYYK++A A E LT+
Sbjct: 60 AANTQKCIRVSGKHNDLEEVGHDTYHHTFFEMLGNWSFGDYYKKEAIMWAWELLTEV-WR 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RL+ T + D+E ++W ++ + HI + G K NFWEMG TGPCG
Sbjct: 119 LPKERLWATVY--------KDDDEAFELWKQVTDINPKHILRFGEKDNFWEMGDTGPCGP 170
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIH ++ + + + VNA + IEIWN+VFI + R + L ++DTG+GFE
Sbjct: 171 CSEIHINLSDDYDNP-SYVNAGTPECIEIWNLVFIQYNRDETGKLHELPAKHVDTGMGFE 229
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +LQNK+S YDTD+F+PL++ I K+SG T N D R+++D+ R +
Sbjct: 230 RVCAVLQNKSSNYDTDIFMPLIDEIVKLSGV-------TYKNEED-KIPMRVIADHIRAL 281
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL----GDVYPE 366
T A+AD P R V +L + ++ L + + + ++L G V+ E
Sbjct: 282 TFAIADGAVPGNEG--RGYVLRRILRRAARYG-RKINLKEPFLFKLVDVLVSTMGSVFTE 338
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
I++ + ++ ++ + E E FN + G+ L + +
Sbjct: 339 IKEKQDYVKKVI------------------------KAEEESFNATLDRGIELFEDVVRR 374
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF----EQKLNELKER 482
+ I I G+ F LYDTYG ++ +A ++ F E + + +E
Sbjct: 375 LNKNNQKI--IPGEDVFKLYDTYGFPVDLTSLMAREIGFSVDEAGFNKLMEAQRKKAREA 432
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
SK K AS ++ L DL F +TD+K YD
Sbjct: 433 SKEKFAS--VNVVLTDLSSFNITDNKQVEFTGYD-------------------------- 464
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
+S A I I+ E N + +I D+T Y AGGQIDD G + +
Sbjct: 465 -------ELKSEAKIIGIKKEGNTNL-IILDRTPFYVEAGGQIDDTG-----KILAPSAE 511
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
+EI ++A +E I+H + + PG+ EVD R MR H+ +H L+ ALR +
Sbjct: 512 IEIVDVAKVENAIIHISENSFAESLKPGMQVIAEVDENRRWDIMRNHSATHFLHKALRTI 571
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ-VDRRHMRASE 720
L T Q V D DF+ + + LS + + +E +N+ + + + R++ E
Sbjct: 572 LGTHVQQAGSYVGPDRLRFDFTHFAK-LSPEEIYDIETLVNEQLRRNLPLIHHRNIPFEE 630
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+ L G+ Y D V ++ D + E C GTHV N+ I +I +S
Sbjct: 631 AKKMGALMFF-GDKYGDRVNVVQFGD----FTMEFCGGTHVKNSSQIGLFKIISEQSIAS 685
Query: 781 GVRSIKCLTG 790
GVR I+ +TG
Sbjct: 686 GVRRIEAVTG 695
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLG Y R AN+QKCIRV GKHNDL G D+YHHT
Sbjct: 28 VPFDDPTLLFTNAGMNQFKDVFLGTGTREYKRAANTQKCIRVSGKHNDLEEVGHDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK++A A E LT+ LP +RL+ T
Sbjct: 88 FFEMLGNWSFGDYYKKEAIMWAWELLTE-VWRLPKERLWAT 127
>gi|53712054|ref|YP_098046.1| alanyl-tRNA synthetase [Bacteroides fragilis YCH46]
gi|265765389|ref|ZP_06093664.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_16]
gi|383117017|ref|ZP_09937764.1| alanyl-tRNA synthetase [Bacteroides sp. 3_2_5]
gi|423258950|ref|ZP_17239873.1| alanyl-tRNA synthetase [Bacteroides fragilis CL07T00C01]
gi|423264079|ref|ZP_17243082.1| alanyl-tRNA synthetase [Bacteroides fragilis CL07T12C05]
gi|59798506|sp|Q64YB4.1|SYA_BACFR RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|52214919|dbj|BAD47512.1| alanyl-tRNA synthetase [Bacteroides fragilis YCH46]
gi|251947683|gb|EES87965.1| alanyl-tRNA synthetase [Bacteroides sp. 3_2_5]
gi|263254773|gb|EEZ26207.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_16]
gi|387776530|gb|EIK38630.1| alanyl-tRNA synthetase [Bacteroides fragilis CL07T00C01]
gi|392706345|gb|EIY99468.1| alanyl-tRNA synthetase [Bacteroides fragilis CL07T12C05]
Length = 872
Score = 362 bits (930), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 265/793 (33%), Positives = 382/793 (48%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K R SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKETRDSFKNFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYHR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLERDNEAASYW-EQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + T+ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSTLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F PL++ I +++G + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPLIKAIAQMAGTE-YGKNEQN------DIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +GD
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DSMGD 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ A KE V + E +E G++
Sbjct: 349 AYPEL-----------------------IAQKELIEKVIKEEEESFLRTLE-----TGIR 380
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K +A + TEISG AFTLYDT+G ++ + + +T+ E F+ ++ + K
Sbjct: 381 LLDKTMADTKANGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNVEEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA D ++ T + YDY Y+T+ RY
Sbjct: 441 QRARNAAAIETGDWIILK----EGTTEFVGYDYTEYETSILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
++ ++ ++ D T YA +GGQ+ D GV L N E
Sbjct: 481 -------------------QVKQKNQTLYQIVLDYTPFYAESGGQVGDTGV--LVN---E 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + P + VD R C H+ +HLL+ AL
Sbjct: 517 FETIEVIDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDEAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEELRKVEHLVNAKIRANVPLQEHRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y D V +I S E C GTHV TG+I +I S
Sbjct: 633 IEEAKELGAIALF-GEKYGDHVRVIQFGS-----SIEFCGGTHVAATGNIGMVKIISESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYHRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|372267651|ref|ZP_09503699.1| alanine--tRNA ligase [Alteromonas sp. S89]
Length = 870
Score = 362 bits (930), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 268/793 (33%), Positives = 392/793 (49%), Gaps = 113/793 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR +FL+YF QGHT V SS +VP D ++ F N+GM QFK+ FLG PY R
Sbjct: 1 MKSAQIREAFLNYFAE-QGHTRVPSSSLVPGNDPTLLFTNAGMVQFKDTFLGQESRPYVR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+KR+A + A EFLTK +
Sbjct: 60 AASSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIKFAWEFLTK-ELK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RL+ T D+E DIWL E+GV + + + NFW+MG TGPCG
Sbjct: 119 LPEERLWVTVH--------ISDDEAADIWLKEMGVSAERFSRLD-EDNFWQMGDTGPCGP 169
Query: 191 SSEIHYDMKGE-PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
SSEI YD + P N D + IEIWN+VF+ +R + + PL K +DTG+G
Sbjct: 170 SSEIFYDHGADVPGGPPGSENDDLDRYIEIWNLVFMQFERSADGELHPLPKPSVDTGMGL 229
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ER+ ++Q S Y+ DLF LL KV G + S R+++D+ R
Sbjct: 230 ERIAAVMQGVHSNYEIDLFQALLNAAGKVVGCSDT-----------EEKSLRVIADHIRS 278
Query: 310 ITVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLVKELSYNIAEILG 361
+ +AD + P + LR ++R A+ L +D+F KLV L +AE +G
Sbjct: 279 CSFLIADGVMPSNEGRGFVLRRIIRRAVRHGHKLGHKDIFFY---KLVAAL---VAE-MG 331
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
D YPE+++ ++S I + LRK E EQF + GL L
Sbjct: 332 DAYPELKE----------KQSVIENALRK--------------EEEQFAKTLDKGLAL-- 365
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
L + LA TEI G++ FTL+DTYG ++ Q++A + LTL +E+ +N +E
Sbjct: 366 --LDEALASLEG-TEIPGELVFTLHDTYGFPTDLTQDIARERGLTLDMAGYEKAMNAQRE 422
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
R++A D ++L D YD +++ N+V I+
Sbjct: 423 RARAAGKFKQDYTDTVEL-------DGATEFLGYDRVTEQ-------GNVVAII------ 462
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
+ G +D I +A ++ D+T YA +GGQ+ D G YL + E+G
Sbjct: 463 ----------KDGELVDRIAEGESA--AIVLDRTPFYAESGGQVGDSG--YLQS---ESG 505
Query: 602 KVEIGELASLEGKIVHFGNVVS-SFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
+ E+ + +H G ++S S V+ +T+ V D R H+ +HLL+AALR
Sbjct: 506 RFEVADCVKHGANHLHQGKLLSGSLAVSEVVTAEVAGDVRQSTALN--HSATHLLHAALR 563
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
+VL QK V S+ DFS + E ++ + A+E +N I V+
Sbjct: 564 KVLGEHVTQKGSLVDSERLRFDFS-HPEAVTSKQLRAIEALVNSQIRANTAVETEETDI- 621
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKEN--VISREPCCGTHVFNTGHIESCTVIGYKS 777
E + GE Y D V ++ + ++ + S E C GTHV TG I ++
Sbjct: 622 ETAKAKGAMALFGEKYGDSVRVLTMGERTDGGAFSVELCGGTHVARTGDIGLLRIVAESG 681
Query: 778 YNHGVRSIKCLTG 790
G R I+ +TG
Sbjct: 682 IASGQRRIEAVTG 694
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+ FLG PY R A+SQ+C+R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLLFTNAGMVQFKDTFLGQESRPYVRAASSQRCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KR+A + A EFLTK + LP +RL+ T
Sbjct: 88 FFEMLGNFSFGDYFKREAIKFAWEFLTK-ELKLPEERLWVT 127
>gi|423269339|ref|ZP_17248311.1| alanyl-tRNA synthetase [Bacteroides fragilis CL05T00C42]
gi|423273098|ref|ZP_17252045.1| alanyl-tRNA synthetase [Bacteroides fragilis CL05T12C13]
gi|392701133|gb|EIY94293.1| alanyl-tRNA synthetase [Bacteroides fragilis CL05T00C42]
gi|392708130|gb|EIZ01238.1| alanyl-tRNA synthetase [Bacteroides fragilis CL05T12C13]
Length = 872
Score = 362 bits (930), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 265/793 (33%), Positives = 382/793 (48%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K R SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKETRDSFKNFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYHR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLERDNEAASYW-EQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + T+ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSTLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F PL++ I +++G + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPLIKAIAQMAGTE-YGKNEQN------DIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +GD
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DSMGD 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ A KE V + E +E G++
Sbjct: 349 AYPEL-----------------------IAQKELIEKVIKEEEESFLRTLE-----TGIR 380
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K +A + TEISG AFTLYDT+G ++ + + +T+ E F+ ++ + K
Sbjct: 381 LLDKTMADTKANGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNVEEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA D ++ T + YDY Y+T+ RY
Sbjct: 441 QRARNAAAIETGDWIILK----EGTTEFVGYDYTEYETSILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
++ ++ ++ D T YA +GGQ+ D GV L N E
Sbjct: 481 -------------------QVKQKNQTLYQIVLDYTPFYAESGGQVGDTGV--LVN---E 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + P + VD R C H+ +HLL+ AL
Sbjct: 517 FETIEVIDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDEAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEELRKVEHLVNAKIRANVPLQEHRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y D V +I S E C GTHV TG+I +I S
Sbjct: 633 IEEAKELGAIALF-GEKYGDHVRVIQFGS-----SIEFCGGTHVAATGNIGMVKIISESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYHRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|423282028|ref|ZP_17260913.1| alanyl-tRNA synthetase [Bacteroides fragilis HMW 615]
gi|404582515|gb|EKA87209.1| alanyl-tRNA synthetase [Bacteroides fragilis HMW 615]
Length = 872
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 265/793 (33%), Positives = 382/793 (48%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K R SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKETRDSFKNFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYHR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLERDNEAASYW-EQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + T+ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSTLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F PL++ I +++G + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPLIKAIAQMAGTE-YGKNEQN------DIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +GD
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DSMGD 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ A KE V + E +E G++
Sbjct: 349 AYPEL-----------------------IAQKELIEKVIKEEEESFLRTLE-----TGIR 380
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K +A + TEISG AFTLYDT+G ++ + + +T+ E F+ ++ + K
Sbjct: 381 LLDKTMADTKANGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNVEEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA D ++ T + YDY Y+T+ RY
Sbjct: 441 QRARNAAAIETGDWIILK----EGTTEFVGYDYTEYETSILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
++ ++ ++ D T YA +GGQ+ D GV L N E
Sbjct: 481 -------------------QVKQKNQTLYQIVLDYTPFYAESGGQVGDTGV--LVN---E 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + P + VD R C H+ +HLL+ AL
Sbjct: 517 FETIEVIDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDEAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEELRKVEHLVNAKIRANVPLQEHRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y D V +I S E C GTHV TG+I +I S
Sbjct: 633 IEEAKELGAIALF-GEKYGDHVRVIQFGS-----SIEFCGGTHVAATGNIGMVKIISESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYHRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|343083356|ref|YP_004772651.1| alanyl-tRNA synthetase [Cyclobacterium marinum DSM 745]
gi|342351890|gb|AEL24420.1| alanyl-tRNA synthetase [Cyclobacterium marinum DSM 745]
Length = 878
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 266/794 (33%), Positives = 384/794 (48%), Gaps = 100/794 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ SK IRS F+D+F ++ H V S+PIV D ++ F N+GM QFK+ FLG + R
Sbjct: 1 MNSKQIRSHFIDFF-QSKAHQFVPSAPIVVKNDPTLMFTNAGMNQFKDYFLGNENPEHIR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V NSQKC+RV GKHNDL G D+YHHT FEM+GNWSF DY+K+DA A E LT+
Sbjct: 60 VTNSQKCLRVSGKHNDLEEVGVDTYHHTMFEMMGNWSFGDYFKKDAINWAWELLTE-VYQ 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY T FGG L D+E D W EL V +D I K NFWEMG TGPCG
Sbjct: 119 LPKDRLYITVFGGDHVDQLEQDDEAFDYWAEL-VEKDRILFCSKKDNFWEMGETGPCGPC 177
Query: 192 SEIHYDM------KGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH+DM K P L VN D +IEIWN+VF+ R + + L ++DT
Sbjct: 178 SEIHFDMRPLEEIKQIPGREL--VNEDHPQVIEIWNLVFMQFNRFADGHLKELPAKHVDT 235
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
GLG ERLV ++QNK+S YDTDLF P + +E +SG FT +D ++R++ D
Sbjct: 236 GLGLERLVRVIQNKSSNYDTDLFTPFIAKMEAISG-------FTYGESEKIDIAFRVIVD 288
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I+ +AD P A +R ++R A+ +K+ L L +AE G+
Sbjct: 289 HIRAISFTIADGQLPSNNKAGYVIRRILRRAVRYGYTFLDLKKPFLFN-LVAVLAEKFGE 347
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPEI + I ++ EE F + L K LE
Sbjct: 348 FYPEINSQQDFITKVIQEEELAF----------LRTLDKGLKNLES-------------- 383
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+ K LA D + I G++AF LYDTYG ++ +A L++ + F + KER
Sbjct: 384 -IQKGLA-DKNENTIPGEVAFELYDTYGFPLDLTSLIARENGLSVDEKGFSAAMKAQKER 441
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
S++ + D + V +++ YDT L+T
Sbjct: 442 SRSASKLETGDWIM-------VNEEESSVFVGYDT---------LETTA----------- 474
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
+ D QL + T YA +GGQ+ D G L+N + +
Sbjct: 475 --QIIKYRKIKDKKKDRFQL--------VLTATPFYAESGGQVGDTGT--LSNDEE---R 519
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
+ + + IVH+ VS+ P + +VDA R HT +HLL +AL++V
Sbjct: 520 ITVLDTTKENDLIVHW---VSALPKNPEADFKGQVDAEKRRLIKSNHTATHLLQSALKQV 576
Query: 663 LTCTYQKSCRVFSDEC-ALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD-RRHMRASE 720
L Q+ + +++ DFS + + LS + + VE +N I + +D +R++ +E
Sbjct: 577 LGEHVQQKGSLVNEKILRFDFSHFAK-LSPEEILQVEDIVNGKIRENIALDEKRNVPINE 635
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+ T + GE Y + V +I + +V E C GTHV TG I + S +
Sbjct: 636 AKAMG-ATALFGEKYGEQVRVITFNPSYSV---ELCGGTHVAATGEIGLFKITSESSISA 691
Query: 781 GVRSIKCLTGDSSK 794
GVR I+ +T ++
Sbjct: 692 GVRRIEAVTARGAE 705
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ FLG + RV NSQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDYFLGNENPEHIRVTNSQKCLRVSGKHNDLEEVGVDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
+GNWSF DY+K+DA A E LT+ LP DRLY T
Sbjct: 92 MGNWSFGDYFKKDAINWAWELLTE-VYQLPKDRLYIT 127
>gi|326800500|ref|YP_004318319.1| alanyl-tRNA synthetase [Sphingobacterium sp. 21]
gi|326551264|gb|ADZ79649.1| alanyl-tRNA synthetase [Sphingobacterium sp. 21]
Length = 871
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 260/800 (32%), Positives = 389/800 (48%), Gaps = 97/800 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR +FL++F ++GH +V S+PIV D ++ F N+GM QFK +FLG P Y R
Sbjct: 1 MTSREIRQAFLNFF-KSKGHEIVPSAPIVVKNDPTLMFTNAGMNQFKELFLGEAPIKYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V ++Q+C+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A + E LT
Sbjct: 60 VVDTQRCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAIAWSWELLTN-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ DRLY T F G + GLP D E W E + I K K NFWEMG TGPCG
Sbjct: 119 IDKDRLYVTVFEGDSEEGLPEDAEAYGYWKE-HIDSTRILKGNKKDNFWEMGETGPCGPC 177
Query: 192 SEIHYDMKGEPSSAL----ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D + + + VNAD +IEIWN VF+ R+ ++ PL ++DTG+
Sbjct: 178 SEIHVDCRSDEERRMIDGSTLVNADHPQVIEIWNNVFMQFNRLKDGSLQPLPAKHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV +LQ+KTS YDTD+F PL++ I K + + YG D + R+++D+
Sbjct: 238 GFERLVRVLQSKTSNYDTDIFQPLIQLIAKAAKVQ-YGEN------EQQDIAMRVMADHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I+ A+AD P A +R ++R A+ + K+ + L +A+ V+
Sbjct: 291 RAISFAIADGQLPSNNKAGYVIRRILRRAVRYAYTFLNFKE-PFLNTLVIPLAQQFEGVF 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
E+ + +Q ++ EE F + LV E ++ + GLV
Sbjct: 350 DELYKQQDFVQKVVLEEELSF----------LRTLVTGIQRFESYHT--DQGLV------ 391
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
SGD AF LYDTYG ++ +A K + FE LN+ KERS+
Sbjct: 392 -------------SGDFAFELYDTYGFPIDLTDLMAREKGWKVDMPGFENALNKQKERSR 438
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
A A + D V +D + YD NL
Sbjct: 439 AATAIDTGD-------WVTVNEDGETHFVGYD-------------NLA-----------T 467
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
+ I R ++ IQ + L+ +T YA GGQ+ D G+ + T++E ++
Sbjct: 468 ETKILKYRKVSAKGKIQYQ------LVLSQTPFYAEGGGQVGDTGI-LIHETSKET--IQ 518
Query: 605 IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL- 663
I + G I+HF + + S + ++V D R + H+ +HLL+AAL++VL
Sbjct: 519 IVDTKKENGLIIHFSDELPS-HLEGVFFAKVAEDRRRDI--QSNHSATHLLHAALKQVLG 575
Query: 664 TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPF 723
QK V + DFS + + +S + + VE+ +N I + +D R
Sbjct: 576 EHVNQKGSLVSEEVLRFDFSHFAK-VSDEELRRVEQVVNAKIRENLALDERRNVPYNDAI 634
Query: 724 LTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVR 783
+T + GE Y D V +I + S+E C GTHV TG+I ++ + GVR
Sbjct: 635 DMGVTALFGEKYGDFVRVIIFDEN---FSKELCGGTHVQYTGNIGFFKILSEGAVAAGVR 691
Query: 784 SIKCLTGDSSKAAVENGKHL 803
I+ +TG ++ ++ L
Sbjct: 692 RIEAITGRRAEEIIDRQDEL 711
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK +FLG P Y RV ++Q+C+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKELFLGEAPIKYSRVVDTQRCLRVSGKHNDLEEVGIDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A + E LT + DRLY T
Sbjct: 92 LGNWSFGDYFKKEAIAWSWELLTN-VYKIDKDRLYVT 127
>gi|189468166|ref|ZP_03016951.1| hypothetical protein BACINT_04561 [Bacteroides intestinalis DSM
17393]
gi|189436430|gb|EDV05415.1| alanine--tRNA ligase [Bacteroides intestinalis DSM 17393]
Length = 872
Score = 362 bits (929), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 263/793 (33%), Positives = 384/793 (48%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR+SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTANEIRNSFKSFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIDWAWEYLVE-VLK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ LY T F GS + GL D E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 IDPKNLYATVFEGSPEEGLERDNEAAAFW-EQHLPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D + E P S L VN D +IEIWN+VF+ R + ++ L IDT
Sbjct: 179 SEIHIDSRPEEEKAKVPGSQL--VNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV LQ KTS YDTD+F P+L+ I ++G YG+ N+ D+ + R+++D
Sbjct: 237 GMGFERLVRTLQGKTSNYDTDVFQPILKAIADMAGT-AYGK----DNQQDI--AMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ +Q + K L I E +G+
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQRQAFMYKLLPVLI-ENMGE 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE++ I ++ EE F LR L G++
Sbjct: 349 AYPELEAQRELISKVIKEEEDSF--LRT--------------------------LETGIR 380
Query: 423 YLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K + A+ TEISG AFTLYDT+G ++ + + +T + F+ ++ + K
Sbjct: 381 LLDKTMADAKAAGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTADIKEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA + D + LK T + YDY Y+T+ RY
Sbjct: 441 QRARNAAA--IETGDWITLKE--RTTEFVGYDYTEYETSILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
++ ++ ++ D T YA +GGQ+ D GV E
Sbjct: 481 -------------------QVKQKNQTLYQIVLDYTPFYAESGGQVGDTGV-----LVSE 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + + P + VD R C H+ +HLL++AL
Sbjct: 517 FETIEVIDTKKENNLPIHITKKLPAHPEAPMMAC---VDTEKRAACAANHSATHLLDSAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEEIRQVEHLVNAKIRANIPLKEYRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
+ L + + GE Y D V +I S E C GTHV TG+I ++ S
Sbjct: 633 IEDAKELGAIALF-GEKYGDHVRVIQFGS-----SVEFCGGTHVAATGNIGMIKIVSESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 63/84 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTK 905
LGNWSF DY+K++A A E+L +
Sbjct: 93 LGNWSFGDYFKKEAIDWAWEYLVE 116
>gi|375357094|ref|YP_005109866.1| putative alanyl-tRNA synthetase [Bacteroides fragilis 638R]
gi|301161775|emb|CBW21315.1| putative alanyl-tRNA synthetase [Bacteroides fragilis 638R]
Length = 872
Score = 362 bits (929), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 265/793 (33%), Positives = 382/793 (48%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K R SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKETRDSFKNFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYHR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLERDNEAASYW-EQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + T+ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSTLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F PL++ I +++G + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPLIKAIAQMAGTE-YGKNEQN------DIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +GD
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DSMGD 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ A KE V + E +E G++
Sbjct: 349 AYPEL-----------------------IAQKELIEKVIKEEEESFLRTLE-----TGIR 380
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K +A + TEISG AFTLYDT+G ++ + + +T+ E F+ ++ + K
Sbjct: 381 LLDKTMADTKANGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNVEEFDVEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA D ++ T + YDY Y+T+ RY
Sbjct: 441 QRARNAAAIETGDWIILK----EGTTEFVGYDYTEYETSILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
++ ++ ++ D T YA +GGQ+ D GV L N E
Sbjct: 481 -------------------QVKQKNQTLYQIVLDYTPFYAESGGQVGDTGV--LVN---E 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + P + VD R C H+ +HLL+ AL
Sbjct: 517 FETIEVIDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDEAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEELRKVEHLVNAKIRANVPLQEHRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y D V +I S E C GTHV TG+I +I S
Sbjct: 633 IEEAKELGAIALF-GEKYGDHVRVIQFGS-----SIEFCGGTHVAATGNIGMVKIISESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYHRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|336408274|ref|ZP_08588768.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_56FAA]
gi|335939574|gb|EGN01448.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_56FAA]
Length = 872
Score = 362 bits (928), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 265/793 (33%), Positives = 382/793 (48%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K R SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKETRDSFKNFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYHR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F G+ + GL D E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGNPEEGLERDNEAASYW-EQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + T+ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSTLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F PL++ I +++G + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPLIKAIAQMAGTE-YGKNEQN------DIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +GD
Sbjct: 290 HIRTIVFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DSMGD 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ A KE V + E +E G++
Sbjct: 349 AYPEL-----------------------IAQKELIEKVIKEEEESFLRTLE-----TGIR 380
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K +A + TEISG AFTLYDT+G ++ + + +T+ E F+ ++ + K
Sbjct: 381 LLDKTMADTKANGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNVEEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA D ++ T + YDY Y+T+ RY
Sbjct: 441 QRARNAAAIETGDWIILK----EGTTEFVGYDYTEYETSILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
++ ++ ++ D T YA +GGQ+ D GV L N E
Sbjct: 481 -------------------QVKQKNQTLYQIVLDYTPFYAESGGQVGDTGV--LVN---E 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+EI + +H + P + VD R C H+ +HLL+ AL
Sbjct: 517 FETIEIIDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDEAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEELRKVEHLVNAKIRANVPLQEHRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y D V +I S E C GTHV TG+I +I S
Sbjct: 633 IEEAKELGAIALF-GEKYGDHVRVIQFGS-----SIEFCGGTHVAATGNIGMVKIISESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYHRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|268531970|ref|XP_002631113.1| C. briggsae CBR-ARS-1 protein [Caenorhabditis briggsae]
Length = 796
Score = 362 bits (928), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 253/798 (31%), Positives = 402/798 (50%), Gaps = 90/798 (11%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDD-SIAFVNSGMCQFKNVFLGLTPAPYPRVANS 75
+R SF D+F ++ H +VKS+ ++P +D S+ F N+GM QFK++ L T RVAN
Sbjct: 27 LRKSFFDFF-QSKKHEIVKSASVIPLENDGSLLFTNAGMNQFKSLILSSTEPR--RVANI 83
Query: 76 QKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYY-KRDACRMALEFLTKPPVSLPL 134
QKC+R GGKHNDL G+D +H TFFEM+GNWSFND + K +AC+ A ++L + + +
Sbjct: 84 QKCIRAGGKHNDLDDVGKDLHHQTFFEMMGNWSFNDAFSKEEACKFAWDYLVEV-LGIDS 142
Query: 135 DRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEI 194
+RLY +YFGG ++ GLP D E ++IW +GVP I + NFWEMG+ GPCG +EI
Sbjct: 143 ERLYVSYFGGIEKLGLPEDRECKEIWKNIGVPSHRILP-FVAENFWEMGAAGPCGPCTEI 201
Query: 195 HYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLV 253
HYD + G +S+L VN D + ++EIWNIVF+S+ R S+ I L +N+IDTG+GFERL+
Sbjct: 202 HYDRIGGRDASSL--VNID-DSVVEIWNIVFMSNVRDSSGKIYNLGRNHIDTGMGFERLL 258
Query: 254 TILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVA 313
+++QNK S +DTD+F+P+L K+S + S + D +R+++D+ R T+A
Sbjct: 259 SVVQNKNSNFDTDVFIPIL---AKISSLTKKNLKYNGSVSSQEDAVFRLVADHVRASTIA 315
Query: 314 LADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDS 370
++D PD T +R ++R + L + + L +L + L +VY E++ S
Sbjct: 316 ISDGAIPDGTGNGFIVRKMMRRSFLQGNSKLGIDRFGL-SDLVPTVISTLKNVYSEVEKS 374
Query: 371 INKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLAR 430
+KI I EE F WK + K + + F++ A
Sbjct: 375 SDKIINIFKEEETQF----------WKTVDKAK---KMFDVG----------------AN 405
Query: 431 DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASN 490
+ + ISG AF L++TYGL ++ E+A + + FE+ E ++ S+ +
Sbjct: 406 ENKSSTISGRKAFNLFETYGLPLSVTIEMARNLGKEVDEKEFERCQLEAQKLSQKASQFK 465
Query: 491 VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRH 550
+P + K FP DK KY Y ++ RY F + T ++ + + +
Sbjct: 466 LP----VFAKDFPTHSDKEKYSYSFENG--RYAFSKVPTTILQVYQNQEKVVV------- 512
Query: 551 ARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--VAYLTNT--TQENGKVEIG 606
L+ N ++ ++ YA GGQ DIG +A N + K++ G
Sbjct: 513 -----------LKENEKGFVVLERCQFYAEQGGQKSDIGKLLADGRNVFEVESAKKLDNG 561
Query: 607 ELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCT 666
+ L G+ + + L ++D + R G M+AH+ +HLLN AL+R
Sbjct: 562 SVTVLFGRALE--------PIQKDLRVEQQLDEKRREGVMKAHSATHLLNWALQRSGLGN 613
Query: 667 YQKSCRVFSDECALDFSVYGETLS----VDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
QK V + D+S ++L +++ +E +N+ I E
Sbjct: 614 GQKGSSVDCNRLRFDYSTGDDSLDKSQRTEALKHLEHILNEFIMKGGLTSVIETTLEEAK 673
Query: 723 FLTHLT--VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+ +L V I V ++ + NV S E C GTHV + IE ++ KS
Sbjct: 674 KIKNLQSDVKEDRIGDSSVRVVTLGSGVNV-SVECCSGTHVHDVSIIEDVAIMSDKSMGQ 732
Query: 781 GVRSIKCLTGDSSKAAVE 798
+R I +TG+ +K E
Sbjct: 733 NLRRIVAVTGEEAKKCRE 750
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 71/104 (68%), Gaps = 5/104 (4%)
Query: 818 IPYGDD-SIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHH 876
IP +D S+ F N+GM QFK++ L T RVAN QKCIR GGKHNDL G+D +H
Sbjct: 49 IPLENDGSLLFTNAGMNQFKSLILSSTEPR--RVANIQKCIRAGGKHNDLDDVGKDLHHQ 106
Query: 877 TFFEMLGNWSFNDYY-KRDACRMALEFLTKPPVSLPLDRLYFTF 919
TFFEM+GNWSFND + K +AC+ A ++L + + + +RLY ++
Sbjct: 107 TFFEMMGNWSFNDAFSKEEACKFAWDYLVE-VLGIDSERLYVSY 149
>gi|167753580|ref|ZP_02425707.1| hypothetical protein ALIPUT_01857 [Alistipes putredinis DSM 17216]
gi|167658205|gb|EDS02335.1| alanine--tRNA ligase [Alistipes putredinis DSM 17216]
Length = 847
Score = 362 bits (928), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 253/769 (32%), Positives = 366/769 (47%), Gaps = 99/769 (12%)
Query: 39 IVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCVRVGGKHNDLSCAGRDSYHH 98
+V D ++ F N+GM QFK++FLG P PYPR A++QKC+RV GKHNDL G D+YHH
Sbjct: 1 MVVKNDPTLMFTNAGMNQFKDIFLGNIPRPYPRAADTQKCLRVSGKHNDLEEVGHDTYHH 60
Query: 99 TFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRD 158
T FEMLGNWSF DY+K++A A E LT L R+Y T F GS + G+P D+E D
Sbjct: 61 TMFEMLGNWSFGDYFKKEAIGWAWELLTG-VYGLDKSRMYATVFEGSPEDGVPFDQEAYD 119
Query: 159 IWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHYDMKGEPSSALA----RVNADRN 214
IWL+ +P DHI + NFWEMG GPCG SEIHYD++ E A VN
Sbjct: 120 IWLQY-LPADHIIRGNKHDNFWEMGDVGPCGPCSEIHYDLRDESEIAAVPGREMVNQGSP 178
Query: 215 DLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLET 274
+IEIWN+VF+ R + ++ PL+ N IDTG+GFERL ILQ K S YDTD+F P ++
Sbjct: 179 LVIEIWNLVFMQFNRKANGSLEPLAANCIDTGMGFERLCMILQGKKSNYDTDVFQPTIQR 238
Query: 275 IEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPD---ATAKLRNVVR 331
I +SG K YG D + R+++D+ R I+ ++AD P A +R ++R
Sbjct: 239 IAAMSG-KTYGAD------EKCDVAMRVVADHLRAISFSIADGQLPSNVKAGYVIRRILR 291
Query: 332 DALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKA 391
A+ + + L + + +G +PE++ I+ ++ EE F LR
Sbjct: 292 RAVRYGYTYLGFNE-PFICRLVAGLVDQMGGQFPELKAQQTLIEKVIEEEESSF--LRT- 347
Query: 392 AVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLA--RDPSITEISGDMAFTLYDTY 449
L G+ L +A R ISG AF LYDTY
Sbjct: 348 -------------------------LATGINLLDGVMAEVRKSGGERISGKDAFLLYDTY 382
Query: 450 GLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKY 509
G ++ + +A + + + EAFE++L KERS+ AA V D +
Sbjct: 383 GFPIDLTELIAREQGIEVDLEAFEKELQAQKERSRNAAA---------------VDTDDW 427
Query: 510 KYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVG 569
K H K+ F DT + I K + +
Sbjct: 428 KELIHI----KQSEFIGYDTLSAEVKIARYRRVSSKGRVSYQ------------------ 465
Query: 570 LIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTP 629
L+FD+T Y +GGQI DIG Y+ N ++ + G I+H +V+ P
Sbjct: 466 LVFDRTPFYGNSGGQIGDIG--YIETA---NERIPVVATEKENGLIIH---IVTQLPENP 517
Query: 630 GLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGET 688
T VD R HT +HL++ ALR+VL T QK V + DFS + +
Sbjct: 518 EATFMAVVDPEKRQAAANNHTATHLMHEALRKVLGTHVEQKGSLVTPEYLRFDFSHF-QK 576
Query: 689 LSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKE 748
++ + + VE+ +N I ++ + E ++ GE Y D V ++
Sbjct: 577 VTHEELRRVEQLVNRAIRANYPLEEKRDATKEEAAAAGAMMLFGEKYGDRVRMVRFG--- 633
Query: 749 NVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
S E C GTHV TG+I ++ + + GVR I+ TG ++ +
Sbjct: 634 --TSVELCGGTHVSATGNIGFFKILNESAISAGVRRIEATTGAKAEEVI 680
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++FLG P PYPR A++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 6 DPTLMFTNAGMNQFKDIFLGNIPRPYPRAADTQKCLRVSGKHNDLEEVGHDTYHHTMFEM 65
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT L R+Y T
Sbjct: 66 LGNWSFGDYFKKEAIGWAWELLTG-VYGLDKSRMYAT 101
>gi|423346121|ref|ZP_17323809.1| alanyl-tRNA synthetase [Parabacteroides merdae CL03T12C32]
gi|409220919|gb|EKN13872.1| alanyl-tRNA synthetase [Parabacteroides merdae CL03T12C32]
Length = 875
Score = 362 bits (928), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 264/801 (32%), Positives = 394/801 (49%), Gaps = 117/801 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF D+F + Q H +V S+P+V GD ++ F N+GM QFK++ LG P YPR
Sbjct: 2 LTAKEIRESFKDFFASKQ-HQIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNVPRKYPR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKQEAINWAWEYLVEV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +RLY T F GS GL D+E W E +P+ HI NFWEMG TGPCG
Sbjct: 120 LNPERLYATVFEGSPAEGLSRDDEAAGYW-EKFLPKAHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E A VN D +IEIWN+VF+ + R + ++ PL IDTG+
Sbjct: 179 SEIHIDLRPEEERAAIPGQDMVNKDHPQVIEIWNLVFMQYNRKADGSLEPLPARVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F P+++ I ++G YG+ D + R+++D+
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPIIKVIADMAGT-AYGKD------KQQDVAMRVIADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I A+ D P A +R ++R A+ K+ + K L I E +GD Y
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLNRKESFMYKLLPVLI-ETMGDAY 350
Query: 365 PEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
PE+ Q ++ + + EES ++T L G++
Sbjct: 351 PELIAQKTLIEKVIKEEEES----------------FLRT--------------LETGIR 380
Query: 423 YLTKQLARDPSITE--ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL- 479
L K++ + + ISG AFTLYDTYG ++ + L L E ++E
Sbjct: 381 LLDKKMEETKAAGKNVISGVDAFTLYDTYGFPLDLTE-------LILRENGMEANIDEFN 433
Query: 480 ----KERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
K++ +A+ A+ + D + LK N VG
Sbjct: 434 VEMQKQKDRARNAAAIETGDWVVLKEG-------------------------GCNFVGY- 467
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
+F D +R+ + I+ ++ ++ D+T YA GGQ+ D G +
Sbjct: 468 ---DLFECDAEILRYRQ-------IKQKNKVLYQIVLDQTPFYAEMGGQVGDTGWLIADD 517
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T V++ + VH +V+ T +++ + R+ C H+ +HLL
Sbjct: 518 ET-----VDVIDTKRENNLPVH---LVTKLPKDVTATFTAKINEKKRIQCECNHSATHLL 569
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDR 713
+ ALR VL T QK V D DFS + + ++ + + VEK +++ I AN +
Sbjct: 570 HEALREVLGTHVEQKGSYVSPDSLRFDFSHF-QKVTDEEIRKVEKLVSEKIRANYPLEEH 628
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
R+M +E L + + GE Y D+V ++ + S E C GTH+ TG I S V+
Sbjct: 629 RNMPIAEAKALGAMALF-GEKYGDEVRVVKYGN-----SIELCGGTHIPATGMIGSLRVV 682
Query: 774 GYKSYNHGVRSIKCLTGDSSK 794
G S GVR I+ +T ++++
Sbjct: 683 GESSIAAGVRRIEAVTAEAAE 703
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++ LG P YPRVA+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 32 GDPTLMFTNAGMNQFKDIILGNVPRKYPRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 91
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K++A A E+L + + L +RLY T
Sbjct: 92 MLGNWSFGDYFKQEAINWAWEYLVE-VLKLNPERLYAT 128
>gi|325954950|ref|YP_004238610.1| alanyl-tRNA synthetase [Weeksella virosa DSM 16922]
gi|323437568|gb|ADX68032.1| alanyl-tRNA synthetase [Weeksella virosa DSM 16922]
Length = 869
Score = 361 bits (927), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 255/796 (32%), Positives = 384/796 (48%), Gaps = 110/796 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ SK IR FL++F + H +V S+PIV D ++ F NSGM QFK FLG R
Sbjct: 1 MKSKDIRKEFLNFF-QQRNHLIVDSAPIVLKDDPTLMFNNSGMAQFKEYFLGNATPKSNR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G+D+YHHT FEMLGNWSF DY+K++A A E LT
Sbjct: 60 IADTQKCLRVSGKHNDLDDVGKDTYHHTMFEMLGNWSFGDYFKKEAIAWAWELLT-GTYG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ D++Y T F G ++ G D+E D+W E + D I K NFWEMG GPCG
Sbjct: 119 IGKDQIYVTVFEGDEKDGTQLDQEALDLWKE-HIAEDRILLGNKKDNFWEMGDVGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E + VN D +IEIWN+VF+ ++R + ++ PL +IDTG+
Sbjct: 178 SEIHVDIRPEEERLAVDGKSLVNQDHPQVIEIWNLVFMQYQRRADGSLEPLPAKHIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ KTS YDTD+F PL++ +EK+SG YG T D + R++ D+
Sbjct: 238 GFERLAMVLQGKTSNYDTDVFRPLIKKLEKISGI-TYGDNEIT------DIAIRVVVDHL 290
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++ A+AD P T +R ++R A+ +K+ + L + + +GD +
Sbjct: 291 RAVSFAIADGQLPSNTGAGYVIRRILRRAISYGYRFLNLKE-PFIYLLFPILKDEMGDFF 349
Query: 365 PEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
PE+ Q+SI + ++ EE F LR + G+
Sbjct: 350 PELIKQESI--VTGVIREEESSF--LRT--------------------------IEHGLN 379
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L + + + + G + F LYDTYG ++ + + T+ + FE ++++ K R
Sbjct: 380 RLNQIIDQYQDTKVVPGHVVFELYDTYGFPADLSRIVVEDHNFTIDEDGFEVEMSKQKAR 439
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
SK A TDD + + N +G +
Sbjct: 440 SKKATALE--------------TDD----------------WVIVRENANEEFVGYDILS 469
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
+ R+ + ++ + + L+ DKT YA +GGQI D G+ N +
Sbjct: 470 TEVQITRYRK-------VKNKKGEFYQLVLDKTPFYAESGGQIGDTGLLISANE-----Q 517
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
+E+ I+HF V T + EVD+ R + H+ +HLL+ ALR V
Sbjct: 518 IEVLNTKKENNLIIHF---VEQLPSNIEATFQAEVDSITRNETQKNHSATHLLHEALRTV 574
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L T QK V D DFS +G+ ++ + +A VEK +ND I + +D + +
Sbjct: 575 LGTHVEQKGSYVGPDYLRFDFSHFGK-MTTEEIAEVEKIVNDRIVASIPLDEKR----NI 629
Query: 722 PFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
PF ++ + GE Y D V LI S E C GTHV NT I + S
Sbjct: 630 PFDEAVSQGAMALFGEKYGDYVRLIKFGS-----SVELCGGTHVKNTSDIRLFKITSESS 684
Query: 778 YNHGVRSIKCLTGDSS 793
G+R I+ +T +++
Sbjct: 685 TAAGIRRIEAITSNAA 700
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK FLG R+A++QKC+RV GKHNDL G+D+YHHT FEM
Sbjct: 32 DPTLMFNNSGMAQFKEYFLGNATPKSNRIADTQKCLRVSGKHNDLDDVGKDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT + D++Y T
Sbjct: 92 LGNWSFGDYFKKEAIAWAWELLT-GTYGIGKDQIYVT 127
>gi|427387200|ref|ZP_18883256.1| alanyl-tRNA synthetase [Bacteroides oleiciplenus YIT 12058]
gi|425725805|gb|EKU88674.1| alanyl-tRNA synthetase [Bacteroides oleiciplenus YIT 12058]
Length = 872
Score = 361 bits (927), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 260/791 (32%), Positives = 378/791 (47%), Gaps = 105/791 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR+SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTANEIRNSFKSFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K+DA A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKDAINWAWEYLVE-VLK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ LY T F GS + GL D E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 IDPKNLYATVFEGSPEEGLERDNEAASFW-EQYLPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D + E A VN D +IEIWN+VF+ R + ++ L IDTG+
Sbjct: 179 SEIHIDSRSEEEKAKVPGNQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV LQ+KTS YDTD+F P+L+ I ++G T+ N+ D+ + R+++D+
Sbjct: 239 GFERLVRTLQDKTSNYDTDVFQPILKAIADMAGT-----TYGKDNQQDI--AMRVIADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++ D P A +R ++R A+ +Q + K L I E +G+ Y
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQRQAFMYKLLPVLI-ENMGEAY 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ I ++ EE F LR L G++ L
Sbjct: 351 PELEAQKELISKVIKEEEDSF--LRT--------------------------LETGIRLL 382
Query: 425 TKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
K + A+ TEISG AFTLYDT+G ++ + + +T + F+ ++ + K+R
Sbjct: 383 EKTMADAKAAGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTADIKEFDAEMQQQKQR 442
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
++ AA + D + LK T + YDY Y+T+ RY
Sbjct: 443 ARNAAA--IETGDWITLKEG--TTEFVGYDYTEYETSILRYR------------------ 480
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
++ ++ ++ D T YA +GGQ+ D G E
Sbjct: 481 -----------------QVKQKNQTLYQIVLDYTPFYAESGGQVGDTGA-----LVSEFE 518
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+E+ + +H + P + VD R C H+ +HLL++ALR
Sbjct: 519 TIEVIDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDSALRE 575
Query: 662 VL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMRAS 719
VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 576 VLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEEIRRVEHLVNAKIRANIFLKEYRNIPIE 634
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
E L + + GE Y D V +I S E C G HV TG I ++ S
Sbjct: 635 EAKELGAIALF-GEKYGDHVRVIQFGS-----SVEFCGGIHVAATGSIGMMKIVAESSVA 688
Query: 780 HGVRSIKCLTG 790
GVR I+ TG
Sbjct: 689 AGVRRIEAYTG 699
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 63/84 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTK 905
LGNWSF DY+K+DA A E+L +
Sbjct: 93 LGNWSFGDYFKKDAINWAWEYLVE 116
>gi|404449183|ref|ZP_11014174.1| alanyl-tRNA ligase [Indibacter alkaliphilus LW1]
gi|403765287|gb|EJZ26169.1| alanyl-tRNA ligase [Indibacter alkaliphilus LW1]
Length = 875
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 271/798 (33%), Positives = 385/798 (48%), Gaps = 100/798 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K IRS+F+++F + Q H VKSSPIV D ++ F N+GM QFK+ FLG A R
Sbjct: 1 MEAKQIRSTFIEFFKSKQ-HQFVKSSPIVVKNDPTLMFTNAGMNQFKDFFLGNEQAKVTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VANSQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT
Sbjct: 60 VANSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIEWAWELLT-DVFK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY + FGG + GL D+E D+W + V D I K NFWEMG TGPCG
Sbjct: 119 LPQDRLYVSVFGGDVEDGLEQDKEAFDLWKGI-VSEDRILFGSKKDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKG----EPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + S VN D +IEIWN+VF+ R+S ++ L ++DTG+
Sbjct: 178 SEIHIDLRSNEERKAQSGYDLVNNDHPQVIEIWNLVFMQFNRLSDGSLKELPAKHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV +Q K S YDTD+F P + +E SG K YG +D + R++ D+
Sbjct: 238 GFERLVRAIQQKPSNYDTDIFTPFIAQLESKSG-KTYGEN------EKIDIAMRVIVDHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I +AD P A +R ++R A+ F Q + EL +AE G+++
Sbjct: 291 RAIAFTIADGQLPSNNKAGYVIRRILRRAVRYGY-TFLGFQKPFIFELMPLLAENFGEIF 349
Query: 365 PEI---QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
PE+ +D I K+ I+ EE+ L K L + + EL Q
Sbjct: 350 PEVASQEDFITKV--IMEEEASFLRTLDNG----LKKLEQIKEELSQ------------- 390
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
+ I ISG +AF LYDTYG ++ +A L++ + F ++ + K
Sbjct: 391 --------KHDRI--ISGKVAFELYDTYGFPLDLTSLIARENGLSVDEKGFAVEMEKQKT 440
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
RS+A A T D Y F +N
Sbjct: 441 RSRAAAEQE--------------TGDWVAVRAEEGVEFIGYDFLTSQSN----------- 475
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
I K+ + G D Q ++ DKT YA +GGQ+ D G + QE+
Sbjct: 476 -ITKYRKIKDKKG---DRFQ--------IVLDKTPFYAESGGQVGDQG---WLKSDQES- 519
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+ + + IVHF V T EVDA R M HT +HLL+AAL++
Sbjct: 520 -IRVLDTKKENDLIVHF---VDKLPKDASATFYSEVDAGKRKASMNNHTATHLLHAALKQ 575
Query: 662 VLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL Q+ + ++E DFS + + ++ + +A VE +N I + +D + +
Sbjct: 576 VLGEHVQQKGSLVNEELLRFDFSHFAK-MTEEEIAEVEAIVNAKIRENIALDEQRNIPID 634
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
T + GE Y D V +I + S E C GTHV TG I ++ S +
Sbjct: 635 EAKKQGATALFGEKYGDFVRVITF---DKGFSVELCGGTHVQATGMIGLFKIVSEGSISA 691
Query: 781 GVRSIKCLTGDSSKAAVE 798
GVR I+ +TG ++ ++
Sbjct: 692 GVRRIEAITGKGAENYIQ 709
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ FLG A RVANSQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDFFLGNEQAKVTRVANSQKCLRVSGKHNDLEEVGVDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT LP DRLY +
Sbjct: 92 LGNWSFGDYFKKEAIEWAWELLT-DVFKLPQDRLYVS 127
>gi|431798385|ref|YP_007225289.1| alanine--tRNA ligase [Echinicola vietnamensis DSM 17526]
gi|430789150|gb|AGA79279.1| alanine--tRNA ligase [Echinicola vietnamensis DSM 17526]
Length = 876
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 265/813 (32%), Positives = 393/813 (48%), Gaps = 102/813 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K IRS+F++YF + Q H V S+PIV D ++ F N+GM QFK+ FLG R
Sbjct: 1 MDAKRIRSTFIEYFQSKQ-HQFVPSAPIVVKNDPTLMFTNAGMNQFKDYFLGNETPATTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A + E LT+
Sbjct: 60 ATNSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIAWSWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP+DRLY T F G + GL D E D+W V +D I NFWEMG GPCG
Sbjct: 119 LPVDRLYVTVFEGDEGDGLERDMEAFDMWT-AHVDKDRILFGDKTDNFWEMGDVGPCGPC 177
Query: 192 SEIHYDM------KGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D+ K +P L VNAD +IE+WN+VFI R + ++ L +IDT
Sbjct: 178 SEIHIDLRTEEEIKAKPGKEL--VNADHPQVIEVWNLVFIQFNRQANGSLSELPAKHIDT 235
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV +QNKTS YDTD+F P + +EK +G K YG +D + R++ D
Sbjct: 236 GMGFERLVRAIQNKTSNYDTDVFTPFIAAVEKRAG-KKYGED------EKIDIAIRVIVD 288
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I+ +AD P A +R ++R A+ F Q + EL ++E G+
Sbjct: 289 HIRAISFTIADGQLPSNNKAGYVIRRILRRAVRYGY-TFLGFQEPFLYELLPLLSEHFGE 347
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
++PEI I ++ EE F + L L+Q
Sbjct: 348 MFPEIASQEEFIAKVIYEEEAAF----------LRTLDNGLKRLDQ-------------- 383
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+ LA D ISG +AF LYDT+G ++ +A + + + F+ ++ E K+R
Sbjct: 384 -IKSDLA-DKGEKVISGKVAFELYDTFGFPLDLTSLIARENGIAVDEKGFDAEMAEQKKR 441
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
S+A A D + N + + L+T
Sbjct: 442 SRAAAEQETGDW----------------VQVSEEANVQFVGYDSLETT------------ 473
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
+ I++ I+ + L+ ++T YA +GGQ+ D GV E+
Sbjct: 474 --SNIIKYR-------EIKEKKGTKYQLVLEETPFYAESGGQVGDKGV-----LVSEDEI 519
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
+++ + IVHF V P T +VD + R M HT +HLL+AAL+ V
Sbjct: 520 IKVLDTKKENDLIVHF---VEKLPQHPEATFTAKVDGKRRGLTMNNHTATHLLHAALKEV 576
Query: 663 LTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQ-VDRRHMRASE 720
L Q+ + +D+ DFS + + LS D + VE +N I + +++R++ E
Sbjct: 577 LGDHVQQKGSLVNDQLLRFDFSHFSK-LSDDEITQVEHIVNKKIRENIPLLEQRNVPIEE 635
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+ T + GE Y + V +I +V E C GTHV +TG I ++ S +
Sbjct: 636 AKKMG-ATALFGEKYGEFVRVITFDKSYSV---ELCGGTHVASTGKIGLFKIVSEGSISS 691
Query: 781 GVRSIKCLTGDSSKAAVENGKHLSTAASFSQIL 813
GVR I+ ++ D+++A V + L S ++L
Sbjct: 692 GVRRIEAISADAAEAYV--NEQLEVVKSLQELL 722
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ FLG R NSQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDYFLGNETPATTRATNSQKCLRVSGKHNDLEEVGVDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A + E LT+ LP+DRLY T
Sbjct: 92 LGNWSFGDYFKKEAIAWSWELLTE-VYKLPVDRLYVT 127
>gi|150009141|ref|YP_001303884.1| alanyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
gi|298377115|ref|ZP_06987069.1| alanine--tRNA ligase [Bacteroides sp. 3_1_19]
gi|423334542|ref|ZP_17312321.1| alanyl-tRNA synthetase [Parabacteroides distasonis CL03T12C09]
gi|205830169|sp|A6LEZ8.1|SYA_PARD8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|149937565|gb|ABR44262.1| alanyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
gi|298266099|gb|EFI07758.1| alanine--tRNA ligase [Bacteroides sp. 3_1_19]
gi|409225733|gb|EKN18651.1| alanyl-tRNA synthetase [Parabacteroides distasonis CL03T12C09]
Length = 873
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 263/799 (32%), Positives = 398/799 (49%), Gaps = 107/799 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF +F + + H +V S+P+V GD ++ F N+GM QFK++ LG P YPR
Sbjct: 2 LTAKEIRESFKQFFASKE-HQIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNVPRKYPR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +RLY T F GS GL D E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPERLYATVFEGSPAEGLDRDNEAAGYW-EQYLPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + A VN D +IEIWN+VF+ R + ++ PL IDTG+
Sbjct: 179 SEIHIDLRSDEERAAVSGADMVNKDHPQVIEIWNLVFMQFNRKADGSLEPLPAKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F P+++ I ++G T+ T + D+ + R+++D+
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPIIKVIAGMAGT-----TYGTDKQQDI--AMRVIADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I A+ D P A +R ++R A+ K+ + K L I E +GD Y
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLDRKEAFMYKLLPVLI-ETMGDAY 350
Query: 365 PEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
PE+ Q ++ + + EES ++T L G++
Sbjct: 351 PELIAQKTLIEKVIKEEEES----------------FLRT--------------LETGIR 380
Query: 423 YLTKQLARDPSI--TEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K++ + T ++G AFTLYDTYG ++ + + + E F + + + K
Sbjct: 381 LLDKKMEETKAAGKTVLNGVDAFTLYDTYGFPLDLTELILRENGMEADIEEFNKAMQKQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
ER++ AA + D + LK D + K+ +G +
Sbjct: 441 ERARNAAA--IETGDWITLK-----DGECKF------------------------VGYDL 469
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
F + +R+ + I+ ++ ++ D+T YA GGQ+ D G +L ++
Sbjct: 470 FECEAEILRYRQ-------IKQKNKVLYQIVLDQTPFYAEMGGQVGDTG--WL---IADD 517
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
K+++ + VH + VT T+++ V R++ C H+ +HLL+ ALR
Sbjct: 518 EKIDVIDTKRENNLPVHLVTKLPK-DVTATFTAKINVKKRIQCEC--NHSATHLLHEALR 574
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMRA 718
VL T QK V D DFS + + ++ + + VE + + I AN + R+M
Sbjct: 575 EVLGTHVEQKGSYVSPDSLRFDFSHF-QKVTDEEIRKVEILVGEKIRANFPLEEHRNMPI 633
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+E L + + GE Y D+V ++ S E C GTH+ TG I S VIG S
Sbjct: 634 AEAKALGAMALF-GEKYGDEVRVVKYGS-----SVELCGGTHIPATGMIGSLRVIGESSI 687
Query: 779 NHGVRSIKCLTGDSSKAAV 797
GVR I+ +T + ++ V
Sbjct: 688 AAGVRRIEAVTAEGAEQFV 706
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++ LG P YPRVA+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 32 GDPTLMFTNAGMNQFKDIILGNVPRKYPRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 91
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K++A A E+L + + L +RLY T
Sbjct: 92 MLGNWSFGDYFKKEAINWAWEYLVE-VLKLNPERLYAT 128
>gi|224538063|ref|ZP_03678602.1| hypothetical protein BACCELL_02953 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221358|ref|ZP_17207828.1| alanyl-tRNA synthetase [Bacteroides cellulosilyticus CL02T12C19]
gi|224520311|gb|EEF89416.1| hypothetical protein BACCELL_02953 [Bacteroides cellulosilyticus
DSM 14838]
gi|392646457|gb|EIY40171.1| alanyl-tRNA synthetase [Bacteroides cellulosilyticus CL02T12C19]
Length = 872
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 262/793 (33%), Positives = 382/793 (48%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR+SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTANEIRNSFKSFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVD-VLK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ LY T F GS + GL D E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 IDPKNLYATVFEGSPEEGLERDNEAASYWEQF-LPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D + E P S L VN D +IEIWN+VF+ R + ++ L IDT
Sbjct: 179 SEIHIDSRPEEEKAQIPGSQL--VNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV LQ+KTS YDTD+F P+L+ I ++G K YG + D + R+++D
Sbjct: 237 GMGFERLVRTLQDKTSNYDTDVFQPILKAIGNMTGKK-YGEDEKS------DIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ +Q + K L I E +G+
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQRQAFMYKLLPVLI-ENMGE 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE++ I ++ EE F LR L G++
Sbjct: 349 AYPELEAQKELISKVIKEEEDSF--LRT--------------------------LETGIR 380
Query: 423 YLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K + A+ TEISG AFTLYDT+G ++ + + +T + F+ ++ + K
Sbjct: 381 LLDKTMADAKAAGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTADIKEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA + D + LK T + YDY Y+T+ RY
Sbjct: 441 QRARNAAA--IETGDWITLKEG--TTEFVGYDYTEYETSILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
++ ++ ++ D T YA +GGQ+ D GV E
Sbjct: 481 -------------------QVKQKNQTLYQIVLDYTPFYAESGGQVGDTGV-----LVSE 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + + P + VD R C H+ +HLL++AL
Sbjct: 517 FETIEVIDTKKENNLPIHITKKLPAHPEAPMMAC---VDTDKRAACAANHSATHLLDSAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEEIRQVEHLVNAKIRANIPLKEYRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
+ L + + GE Y D V +I S E C GTHV TG+I ++ S
Sbjct: 633 IEDAKELGAIALF-GEKYGDHVRVIQFGS-----SVEFCGGTHVAATGNIGMIKIVSESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAINWAWEYL 114
>gi|256841698|ref|ZP_05547204.1| alanyl-tRNA synthetase [Parabacteroides sp. D13]
gi|256736592|gb|EEU49920.1| alanyl-tRNA synthetase [Parabacteroides sp. D13]
Length = 873
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 263/799 (32%), Positives = 399/799 (49%), Gaps = 107/799 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF +F + + H +V S+P+V GD ++ F N+GM QFK++ LG P YPR
Sbjct: 2 LTAKEIRESFKQFFASKE-HQIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNVPRKYPR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +RLY T F GS GL D E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPERLYATVFEGSPAEGLDRDNEAAGYW-EQYLPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + A VN D +IEIWN+VF+ R + ++ PL IDTG+
Sbjct: 179 SEIHIDLRSDEERAAVSGADMVNKDHPQVIEIWNLVFMQFNRKADGSLEPLPAKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F P+++ I ++G T+ T + D+ + R+++D+
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPIIKVIAGMAGT-----TYGTDKQQDI--AMRVIADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I A+ D P A +R ++R A+ K+ + K L I E +GD Y
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLDRKEAFMYKLLPVLI-ETMGDAY 350
Query: 365 PEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
PE+ Q ++ + + EES ++T L G++
Sbjct: 351 PELIAQKTLIEKVIKEEEES----------------FLRT--------------LETGIR 380
Query: 423 YLTKQLARDPSI--TEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K++ + T ++G AFTLYDTYG ++ + + + EAF + + + K
Sbjct: 381 LLDKKMEETKAAGKTVLNGVDAFTLYDTYGFPLDLTELILRENGMEADIEAFNKAMQKQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
ER++ AA + D + LK + + K+ +G +
Sbjct: 441 ERARNAAA--IETGDWITLK-----EGECKF------------------------VGYDL 469
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
F + +R+ + I+ ++ ++ D+T YA GGQ+ D G +L ++
Sbjct: 470 FECEAEILRYRQ-------IKQKNKVLYQIVLDQTPFYAEMGGQVGDTG--WL---IADD 517
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
K+++ + VH + VT T+++ V R++ C H+ +HLL+ ALR
Sbjct: 518 EKIDVIDTKRENNLPVHLVTKLPK-DVTATFTAKINVKKRIQCEC--NHSATHLLHEALR 574
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMRA 718
VL T QK V D DFS + + ++ + + VE + + I AN + R+M
Sbjct: 575 EVLGTHVEQKGSYVSPDSLRFDFSHF-QKVTDEEIRKVEILVGEKIRANFPLEEHRNMPI 633
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+E L + + GE Y D+V ++ S E C GTH+ TG I S VIG S
Sbjct: 634 AEAKALGAMALF-GEKYGDEVRVVKYGS-----SVELCGGTHIPATGMIGSLHVIGESSI 687
Query: 779 NHGVRSIKCLTGDSSKAAV 797
GVR I+ +T + ++ V
Sbjct: 688 AAGVRRIEAVTAEGAEQFV 706
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++ LG P YPRVA+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 32 GDPTLMFTNAGMNQFKDIILGNVPRKYPRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 91
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K++A A E+L + + L +RLY T
Sbjct: 92 MLGNWSFGDYFKKEAINWAWEYLVE-VLKLNPERLYAT 128
>gi|157273379|gb|ABV27278.1| alanyl-tRNA synthetase [Candidatus Chloracidobacterium
thermophilum]
Length = 880
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 269/828 (32%), Positives = 396/828 (47%), Gaps = 119/828 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L IR FLDYF GH +VKSSP++P DD++ F N+GM QFK+VF G Y R
Sbjct: 2 LTGHDIRRRFLDYFAR-HGHRIVKSSPVLPP-DDTLLFTNAGMNQFKDVFTGRETREYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A+SQKC+R GGKHNDL G+ + HHTFFEMLGN+SF DY+K +A A E L +
Sbjct: 60 AASSQKCIRAGGKHNDLDEVGKTARHHTFFEMLGNFSFGDYFKEEAIAFAWELLLR-EFG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LPL+RL+FT + D+E +W ++G P D I + G K NFW+MG TGPCG
Sbjct: 119 LPLERLWFTVY--------EDDDEAFALWKKVGAPADRILRFGKKENFWQMGETGPCGPC 170
Query: 192 SEIHYDMKGE-PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIHY + + + VN + IEIWN+VF+ +R + T+ PL K +DTG G E
Sbjct: 171 SEIHYFLGDDLADNRPEHVNGPGDTTIEIWNLVFMQFERFADGTLKPLPKPSVDTGAGLE 230
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RL ++LQ K S YDTDL P++E I +G KPY + + + S R+++D++R
Sbjct: 231 RLASVLQGKKSNYDTDLIFPIVEHIAARAG-KPY--HYDSPD----GVSMRIIADHARAT 283
Query: 311 TVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLVKELSYNIAEILGD 362
++AD ++P T + LR ++R A+ L E++F + +++ + +
Sbjct: 284 AFSIADGIYPGNTGRNYVLRKIMRRAIWHGRRLGIENLF-------LHDITAFVVAHMAA 336
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PE+Q I ++ E ++F L + LE+ E G+V
Sbjct: 337 AFPELQTQAEVITRVVTTEEKLFS----------ATLAAGRKRLEEAFRRAEHGVV---- 382
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
SG AF LY TYGL ++I +A + L + FE L E ER
Sbjct: 383 ---------------SGADAFDLYQTYGLPLDLIAYIAEQRGLRVDEAGFEAALTE--ER 425
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG---IVIG-D 538
+A+ + + + + P L G I G D
Sbjct: 426 IRARES--------------------------WKGGTAKAVAPAYQAALDGRPTIFRGYD 459
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
+ D R G ++ ++ + V I D+T YA AGGQ+ D G+
Sbjct: 460 HLSLPDLRVRALIRQGELVEVLRAGEDGEV--ILDETPFYAEAGGQVGDTGLL------- 510
Query: 599 ENGKVEI---GELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
EN V + +A + G IVH V+ + + +T+ V+ D R R M H+ +HL
Sbjct: 511 ENEAVTMRVTDTVAPVTGLIVHCVKVLRGAVRTHDRVTATVDADRRRR--TMLNHSATHL 568
Query: 655 LNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
L+AALR VL Q V D+ DF+ Y LS D +A VE+ +N I + +
Sbjct: 569 LHAALREVLGAHVKQAGSEVAPDKLRFDFTHYA-ALSADEIAEVERLVNAQIRRNAPLAK 627
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
R M + + GE Y D V ++++ S E C GTHV TG I +I
Sbjct: 628 REMPLDAAIAAGAIALF-GEKYGDVVRVVEVPG----FSIELCGGTHVTATGDIGLFKII 682
Query: 774 GYKSYNHGVRSIKCLTGDSSKAAVENGKHL--STAASFSQILNVGNIP 819
S GVR I +TG+++ + + + + AA+F V IP
Sbjct: 683 SESSIAAGVRRIIAVTGEAAFERFQADEAILSNLAATFRLGGEVSEIP 730
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
DD++ F N+GM QFK+VF G Y R A+SQKCIR GGKHNDL G+ + HHTFFEM
Sbjct: 32 DDTLLFTNAGMNQFKDVFTGRETREYTRAASSQKCIRAGGKHNDLDEVGKTARHHTFFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGN+SF DY+K +A A E L + LPL+RL+FT
Sbjct: 92 LGNFSFGDYFKEEAIAFAWELLLR-EFGLPLERLWFT 127
>gi|6707748|sp|Q9XDM3.1|SYA_AQUPY RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|4587716|gb|AAD25871.1|AF027500_1 alanyl-tRNA synthetase [Aquifex pyrophilus]
Length = 871
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 258/787 (32%), Positives = 384/787 (48%), Gaps = 102/787 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ IR FL +F +GHT VKS+P+VP D ++ FVN+GM FKNVFLGL PY R
Sbjct: 3 FSAHEIRELFLSFF-EKKGHTRVKSAPLVPENDPTLLFVNAGMVPFKNVFLGLEKRPYKR 61
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ QKC+RV GKHNDL G S HHTFFEMLGN+SF DY+K++A A EF+T+ +
Sbjct: 62 ATSCQKCLRVSGKHNDLEQVGYTSRHHTFFEMLGNFSFGDYFKKEAIEYAWEFVTE-VLK 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLE-LGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RLY + + DEE IW E +G+P + I + G + NFW+MG TGPCG
Sbjct: 121 LPKERLYVSVY--------KDDEEAYRIWNEHIGIPSERIWRLGEEDNFWQMGDTGPCGP 172
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SSEI+ D +EIWN+VF+ + R + PL IDTG+G E
Sbjct: 173 SSEIYVDR--------GEEYEGEERYLEIWNLVFMQYNRDENGVLTPLPHPNIDTGMGLE 224
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ ++LQ K S ++ D+ PL+E E+VSG K YG F T D + R+++D+ R I
Sbjct: 225 RIASVLQGKNSNFEIDIIYPLIEFGEEVSGKK-YGEKFET------DVALRVIADHLRAI 277
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
T A++D + P + +R ++R A+ + + + L K + + +I+ + YPE+
Sbjct: 278 TFAISDGVIPSNEGRGYVIRRILRRAMRFGYQL-GITEPFLYKGIDL-VVDIMKEPYPEL 335
Query: 368 QDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ S + ++ ++ GEE R LR +E + E L G K LT
Sbjct: 336 ELSRDFVKGIVKGEEERFIRTLRSG--------------MEYIQEVIEKALSEGRKTLT- 380
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
G FT YDTYG ++IQE+A K L + E F+ +L E +ER++
Sbjct: 381 ------------GKEVFTAYDTYGFPVDLIQEIAKEKGLEIDLEGFQCELEEQRERARKS 428
Query: 487 AASNVPDID--LMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
++ LK +T Y+ H + +T ++GI++GD++
Sbjct: 429 FKIETKEVKPVYAHLKELGITSRFVGYE-HLE----------YETEVLGIIVGDEIVSEI 477
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
K +T Y GGQI D G+ T + KVE
Sbjct: 478 KEGEEGEII------------------LRETPFYPEGGGQIGDSGI---IETDKGIFKVE 516
Query: 605 IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT 664
+ + EG IVH G ++ K++ VD R MR HT +HLL+AALR +L
Sbjct: 517 DTQRPT-EGIIVHIGKLLKG-KISVKDIVHARVDKERRWDIMRNHTATHLLHAALRNLLG 574
Query: 665 CTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPF 723
+++ + +D+ DF+ + L+ + + +E+ +N+ I + V M A +
Sbjct: 575 EHVRQAGSLVADKYLRFDFTHFS-PLTEEEIKRIEELVNEKIRENLPVSVMEM-AYQEAL 632
Query: 724 LTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVR 783
T I E Y + V +I + S+E C GTHV TG I +I S GVR
Sbjct: 633 QTGAIAIFEEKYGERVRVISCGE----FSKELCGGTHVSATGDIGYFKIISESSVGAGVR 688
Query: 784 SIKCLTG 790
I TG
Sbjct: 689 RIVAQTG 695
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ FVN+GM FKNVFLGL PY R + QKC+RV GKHNDL G S HHT
Sbjct: 30 VPENDPTLLFVNAGMVPFKNVFLGLEKRPYKRATSCQKCLRVSGKHNDLEQVGYTSRHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K++A A EF+T+ + LP +RLY +
Sbjct: 90 FFEMLGNFSFGDYFKKEAIEYAWEFVTE-VLKLPKERLYVS 129
>gi|295132657|ref|YP_003583333.1| alanyl-tRNA synthetase [Zunongwangia profunda SM-A87]
gi|294980672|gb|ADF51137.1| alanyl-tRNA synthetase [Zunongwangia profunda SM-A87]
Length = 869
Score = 360 bits (923), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 260/797 (32%), Positives = 386/797 (48%), Gaps = 110/797 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR SFL++F + H++V S+P+V D S+ F N+GM QFK FLG + R
Sbjct: 1 MKSQEIRKSFLEFF-QGKSHSIVPSAPMVLKDDPSLMFTNAGMVQFKEFFLGNSVPKNTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V +SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K +A A E LT
Sbjct: 60 VTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEEAINWAWELLTH-KFK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ D LY + F GS++ G+ D E +IW ++ VP D I K NFWEMG GPCG
Sbjct: 119 IDKDSLYVSVFEGSEEDGVGLDTEALEIWKKI-VPEDRIIYGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKG------EPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ +P L VNAD ++EIWN+VF+ R + ++ L +IDT
Sbjct: 178 SEIHVDIRSPEEKAEKPGKEL--VNADHPQVVEIWNLVFMQFNRKADGSLEELPAKHIDT 235
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL ++Q K S YDTD+F PL+ IEK++ + ++ TS T++ + R+++D
Sbjct: 236 GMGFERLCMVMQGKQSNYDTDVFTPLITEIEKITNS-----SYGTSEETNI--AIRVIAD 288
Query: 306 YSRMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+ R + ++AD P T + + + F + + +L +G+
Sbjct: 289 HVRAVAFSIADGQLPSNTGAGYVIRRILRRAIRYGFTFLNTKEPFIYKLVDCTKSQMGEA 348
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE+ I+ ++ EE F LR LEQ GLV+
Sbjct: 349 FPELVKQQQLIENVIKEEELSF--LRT---------------LEQ-------GLVMLENI 384
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
+T+ ++D EISG AF LYDT+G ++ + K +L FE +L + KERS
Sbjct: 385 VTQ--SKDK---EISGVKAFELYDTFGFPIDLTALILKEKGYSLNIAEFEAELKKQKERS 439
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+AA+ V D ++ V +D + +T K + ++T G +
Sbjct: 440 --RAATQVSSGDWEEINE--VDEDAFVGYDQLETQVKIAKYRKVETKKQGTL-------- 487
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
++F KT Y GGQ+ D G YLT+ + K+
Sbjct: 488 ------------------------YQIVFTKTPFYPEGGGQVGDKG--YLTSGEE---KI 518
Query: 604 EIGELASLEGKIVHFG-----NVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
I + +I+HF N+ SF VDA R HT +HLL+ A
Sbjct: 519 SIIDTKKESNQIIHFAKKLPQNISGSFTAV--------VDASARTKTAANHTATHLLHQA 570
Query: 659 LRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
LR +L T QK V + DFS + + LS + + VE+++ND I +Q++ +
Sbjct: 571 LRHILGTHVEQKGSMVQPNYMRFDFSHFSK-LSSEEIEKVEQFVNDRIQEGLQLEEQRNI 629
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
A + + GE Y D V I + S E C GTHV NT I + G +
Sbjct: 630 AYQHALDQGAIALFGEKYGDSVRAIRFGE-----SMELCGGTHVKNTADIWYFKITGESA 684
Query: 778 YNHGVRSIKCLTGDSSK 794
G+R I+ +TGD+ K
Sbjct: 685 VASGIRRIEAITGDAVK 701
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D S+ F N+GM QFK FLG + RV +SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPSLMFTNAGMVQFKEFFLGNSVPKNTRVTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K +A A E LT + D LY +
Sbjct: 92 LGNWSFGDYFKEEAINWAWELLTH-KFKIDKDSLYVS 127
>gi|325983477|ref|YP_004295879.1| alanyl-tRNA synthetase [Nitrosomonas sp. AL212]
gi|325532996|gb|ADZ27717.1| alanyl-tRNA synthetase [Nitrosomonas sp. AL212]
Length = 865
Score = 360 bits (923), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 250/796 (31%), Positives = 394/796 (49%), Gaps = 112/796 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR FL++F +QGHT+V SSP+VP D ++ F N+GM QFK++FLG PY R
Sbjct: 1 MKSSEIRQKFLEFF-ESQGHTVVSSSPLVPGNDPTLLFTNAGMVQFKDIFLGQDKRPYVR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+KRDA A +FLT ++
Sbjct: 60 AVSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAILFAWDFLTHT-LN 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+P ++L+ T + D+E IWL E+GV I + NFW+MG TGPCG
Sbjct: 119 IPHEKLWVTVY--------AEDDEAAGIWLNEVGVEPSRIVRIATMDNFWQMGDTGPCGP 170
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI YD G P SA +AD + IEIWN+VF+ + R SA + PL K +DT
Sbjct: 171 CSEIFYDHGADVQGGPPGSA----DADGDRYIEIWNLVFMQYNRDSAGVLHPLPKPSVDT 226
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ++Q+ S YD DLF L+ K R TSN D S ++++D
Sbjct: 227 GMGLERISAVMQHVHSNYDIDLFQSLI---------KAAARVTNTSNLND--NSLKVIAD 275
Query: 306 YSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGK-LVKELSYNIAEILGDVY 364
+ R + +AD + P + + + R +K+ Q + +L ++ +++G Y
Sbjct: 276 HIRACSFLIADGVIPGSEGRGYVLRRIIRRAIRHGYKLGQKQPFFHQLVEDLDQVMGQAY 335
Query: 365 PEIQDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
PE+ + ++ ++L EE R + L G++
Sbjct: 336 PELTAAKARVAAVLLQEEERFAETLEN-----------------------------GMQI 366
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L L+++ I + G+ AF LYDT+G ++ ++A + +T+ + FEQ + ++R
Sbjct: 367 LETALSQNIQI--LDGETAFRLYDTFGFPIDLTADIARERGITVDYAGFEQAM--ARQRE 422
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+A+AAS K+ + + + TF +T + Q+ +
Sbjct: 423 QARAAS------------------KFTLQEGIEYSGSQTTFYGYET----LQHEGQILAL 460
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
K G+++DSI+ A V + D+T YA +GGQ+ D G NG
Sbjct: 461 YKQ-------GSAVDSIEAGDEAVV--VLDQTPFYAESGGQVGDCG-----ELLAANGIF 506
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
E+ + ++ + + S ++ T +V+A+ R+ H+ +HLL+AALR VL
Sbjct: 507 EVTDTQKIQAGVFGHKGKLHSGRLMIKDTVHAQVNAQNRISIANNHSATHLLHAALREVL 566
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
T QK V ++ DFS + L+ D + A+E+ +ND I N V+ M+ +
Sbjct: 567 GTHVTQKGSLVDANRTRFDFS-HNVPLTADDIRAIERLVNDQIRNNCIVEAATMKYDDAI 625
Query: 723 FLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGV 782
+ + GE Y D V +I + + S E C GTHV G I ++ G+
Sbjct: 626 KRGAMALF-GEKYSDVVRVIGMGE----FSTELCGGTHVPQVGQIGLFKIVAESGVAAGI 680
Query: 783 RSIKCLTGDSSKAAVE 798
R ++ +TG KAA++
Sbjct: 681 RRVEAVTG---KAAID 693
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK++FLG PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLLFTNAGMVQFKDIFLGQDKRPYVRAVSSQRCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA A +FLT +++P ++L+ T
Sbjct: 88 FFEMLGNFSFGDYFKRDAILFAWDFLTH-TLNIPHEKLWVT 127
>gi|313145280|ref|ZP_07807473.1| alanyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
gi|313134047|gb|EFR51407.1| alanyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
Length = 872
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 260/793 (32%), Positives = 381/793 (48%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K R SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKETRDSFKNFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYHR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D E IW + +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLERDNEAASIWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F PL+++I +++G + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPLIKSIAQMAGTE-YGKNEQN------DIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +GD
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DSMGD 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ A KE V + E +E G++
Sbjct: 349 AYPEL-----------------------IAQKELIEKVIKEEEESFLRTLE-----TGIR 380
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K +A + TEISG AFTLYDT+G ++ + + +T+ F+ ++ + K
Sbjct: 381 LLDKTMADTKATGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNTVEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA D ++ T + YDY Y+T+ RY
Sbjct: 441 QRARNAAAIETGDWIILK----EGTTEFVGYDYTEYETSILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
++ ++ ++ D T YA +GGQ+ D GV E
Sbjct: 481 -------------------QVKQKNQTLYQIVLDYTPFYAESGGQVGDTGV-----LVSE 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + P + V+ R C H+ +HLL+ AL
Sbjct: 517 FETIEVIDTKKENNLPIHITKKLPEHPEAPMMAC---VNTDKRAACAANHSATHLLDEAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEELRKVEHLVNAKIRANVPLQEHRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y D V +I S E C GTHV TG+I +I S
Sbjct: 633 IEEAKELGAIALF-GEKYGDHVRVIQFGS-----SIEFCGGTHVAATGNIGMVKIISESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYHRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|171687707|ref|XP_001908794.1| hypothetical protein [Podospora anserina S mat+]
gi|170943815|emb|CAP69467.1| unnamed protein product [Podospora anserina S mat+]
Length = 911
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 251/808 (31%), Positives = 385/808 (47%), Gaps = 98/808 (12%)
Query: 54 MCQFKNVFLGLTPAPYP-----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWS 108
M QFK +FLG P R A++QKC+R GGKHNDL G+DSYHHTFFEMLGNWS
Sbjct: 1 MAQFKPLFLGTVGKTEPMAALKRAADTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWS 60
Query: 109 FNDYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRD 168
F DY+K++A E LTK L +RLY TYF G++ GL D E + +WL+ GVP D
Sbjct: 61 FGDYFKKEAIGWTWELLTKV-YGLDPNRLYVTYFEGNEAMGLEPDLEAKQLWLDQGVPED 119
Query: 169 HIKKEGMKCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHK 228
HI MK NFWEMG GPCG SE+HYD G ++A VN D ++EIWN VF+ +
Sbjct: 120 HILPGNMKDNFWEMGDQGPCGPCSEVHYDKVGGRNAA-HLVNQDDPLVVEIWNNVFMQYD 178
Query: 229 RVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTF 288
R ++ PL +IDTGLGFERLV+ LQ+K+S YDTD+F PL I +VSG++PY +
Sbjct: 179 RQKDRSLKPLPAKHIDTGLGFERLVSALQHKSSNYDTDVFAPLFAKIVEVSGSRPYSDKY 238
Query: 289 TTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLISEDVFK---VKQ 345
+ +DT+ R+++D+ R+++ ++AD P + V R K
Sbjct: 239 GKDDVDGVDTALRVVADHIRLLSFSIADGAVPGNIGRGYVVRRVLRRGVRYARKYLNANI 298
Query: 346 GKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPE 405
G ++ + E +G+ +PE++ I+ IL EE F AV
Sbjct: 299 GSFFSQILPALVEQMGEQFPELKKKEADIKEILDEEEVAF------AVT----------- 341
Query: 406 LEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKL 465
L++ M E K K+L SG + LYDT+G ++ + +A + L
Sbjct: 342 LDRGEAMFEKYAAAATKAGEKKL---------SGADVWRLYDTFGFPVDLTKLMAEERGL 392
Query: 466 TLCHEAFEQKLNELKERSKA--KAASNVPDI------DLMDLKHFPVTDDKYKYDYHYDT 517
T+ E + + +E SKA +A + P + +L + ++ P TD + KY
Sbjct: 393 TIDEEEVKVAQEKAREASKAVKEAVTTFPKLTVHHISELENDRNIPRTDSEAKYSAQSSE 452
Query: 518 NSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASI--DSIQLEHNAWVGLIFDKT 575
+ F +G+ +S + +G+I DKT
Sbjct: 453 GKIQLIF----------------------------NGSEFIENSKDVPPKTPLGIILDKT 484
Query: 576 NLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRV 635
N YA +GGQ+ D G + + + ++ + G +VH G + + G +
Sbjct: 485 NFYAESGGQVADTGRIIIDDEAE----FKVLDTQEFGGYVVHSG-FLEYGNLKAGDVVKC 539
Query: 636 EVDARMRLGCMRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETLSVDSV 694
E D R HT +H+LN ALR VL T Q V D+ DFS + +++ +
Sbjct: 540 EFDELRRQPIRNNHTGTHVLNHALREVLGDTVNQAGSLVDQDKLRFDFS-HKTQVTLPEI 598
Query: 695 AAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISRE 754
+E+ N I ++V + + SE + L + GE YPD V ++ + + ++
Sbjct: 599 KRIEELSNADIRKNLKVYAKDVALSEAREINGLRAVFGETYPDPVRVVSVGASVEEMLKD 658
Query: 755 P------------CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKH 802
P C GTHV TG I+ ++ G+R I TG + A ++ K
Sbjct: 659 PKNPEWRQFSVEFCGGTHVDATGLIKDLIIVEESGIAKGIRRIVAYTGAGAHQAQQDAKD 718
Query: 803 LSTAASFSQILNVGNIPYGDDSIAFVNS 830
S ++ ++ + +G + ++ V +
Sbjct: 719 FS-----DRLDHIAALEFGPEKVSLVKA 741
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 61/93 (65%), Gaps = 6/93 (6%)
Query: 832 MCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEMLGNWS 886
M QFK +FLG P R A++QKCIR GGKHNDL G+DSYHHTFFEMLGNWS
Sbjct: 1 MAQFKPLFLGTVGKTEPMAALKRAADTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWS 60
Query: 887 FNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
F DY+K++A E LTK L +RLY T+
Sbjct: 61 FGDYFKKEAIGWTWELLTK-VYGLDPNRLYVTY 92
>gi|333029831|ref|ZP_08457892.1| alanyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
gi|332740428|gb|EGJ70910.1| alanyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
Length = 872
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 260/796 (32%), Positives = 390/796 (48%), Gaps = 101/796 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K IR SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 1 MTAKEIRESFKEFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNKPAKYKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 60 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIEWAWEYLVD-VLQ 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +RLY T F GS + GL DEE W E +P++ I NFWEMG TGPCG
Sbjct: 119 LDSNRLYATIFEGSPEEGLDRDEEAFSFW-EKHLPKERIINGNKHDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E + VN D +IEIWN+VF+ R + T+V L IDTG+
Sbjct: 178 SEIHIDLRSEAERKAVDGRSLVNHDHPQVIEIWNLVFMQFNRKADGTLVDLPHKVIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ K S YDTD+F PL++ I ++ K YG + +LD + R+++D+
Sbjct: 238 GFERLCMALQGKISNYDTDVFQPLIQKIASLANVK-YGES------KELDIAMRVIADHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++AD P A +R ++R A+ F ++G + +L + E +GD Y
Sbjct: 291 RTIAFSIADGQLPSNAKAGYVIRRILRRAVRYGY-TFLNQKGAFMYKLLPVLNESMGDAY 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE L + + + + K + + ++T L + N M+E
Sbjct: 350 PE-----------LIAQKVLIEKVIKEEEESFLHTLETGIHLLE-NTMDE---------- 387
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
R TEISG FTLYDTYG ++ + + +T E F ++ K++ +
Sbjct: 388 ----TRKQGKTEISGKETFTLYDTYGFPLDLTELILREHGMTADLEGFNAEMQ--KQKDR 441
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
A+ A+++ D + +K T + YDY Y+ + RY
Sbjct: 442 ARNAASIETSDWVTVKEG--TTEFIGYDYTEYEVSILRYR-------------------- 479
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
I + + L+ DKT YA +GGQ+ D GV L N +N +
Sbjct: 480 ---------------KITQKKKTYFQLVLDKTPFYAESGGQVGDTGV--LVN---DNETI 519
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
+I + +H + + T VD R C H+ +HLL+ ALR VL
Sbjct: 520 DIIDTKKENNLPIH---ITTKLPTDLEATFMACVDREKRAACAANHSATHLLDQALREVL 576
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRHMRASEL 721
+ QK V + DFS + + ++ + + VE+ IN+ I + + + R + E
Sbjct: 577 GSHVEQKGSLVTPETLRFDFSHF-QKVTDEEIRQVEQIINERIRQNISLTEYRSIPIQEA 635
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
L + + GE Y ++V ++ + S E C GTHV TG I +I S G
Sbjct: 636 RDLGAIALF-GEKYGEEVRVVQFDE-----SIEFCGGTHVPATGSIGMFKIISEGSIASG 689
Query: 782 VRSIKCLTGDSSKAAV 797
+R I+ TG+ + V
Sbjct: 690 IRRIEAWTGEKVEQLV 705
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDIILGNKPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
LGNWSF DY+K++A A E+L + L +RLY T
Sbjct: 92 LGNWSFGDYFKKEAIEWAWEYLVD-VLQLDSNRLYATI 128
>gi|225560127|gb|EEH08409.1| alanyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
Length = 1029
Score = 359 bits (922), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 255/819 (31%), Positives = 400/819 (48%), Gaps = 113/819 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R++FLD+F GHT V SS +VP D ++ F N+GM Q+K++FLG A R
Sbjct: 106 VRNAFLDFF-KENGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDFATLRR 164
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQK TFFEMLGNWSF DY+K++A R + + LTK
Sbjct: 165 AHNSQK---------------------TFFEMLGNWSFGDYFKKEAIRYSWDLLTKV-YG 202
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYF G+ G+ D E +++WL +GV DH+ MK NFWEMG GPCG
Sbjct: 203 LNPDRLYVTYFEGNPDAGIGPDLEAKELWLSVGVAEDHLLSGNMKDNFWEMGEQGPCGPC 262
Query: 192 SEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIHYD + G +S L VN D +++EIWN VFI + R ++ PL ++DTG+G+E
Sbjct: 263 SEIHYDRIGGRNASHL--VNQDDPNVLEIWNNVFIQYNREPDKSLRPLPNKHVDTGMGYE 320
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RLV+ILQNK+S YDTD+F PL E I +++G +PY F + +DT+YR+++D+ R +
Sbjct: 321 RLVSILQNKSSNYDTDVFTPLFEKISEITGCRPYTGKFHEEDTDGIDTAYRVVADHVRTL 380
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
T A++D P+ + +R V+R + V+ G ++ + + +GD++PEI
Sbjct: 381 TFAISDGASPNNEGRGYVVRRVLRRGARYARKYLNVEIGGFFSKIVPTLVDQMGDMFPEI 440
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ + IL EE F K L + + E++ +
Sbjct: 441 RRKQTDVMEILDEEEISFA----------KTLDRGERLFEEYALQ--------------- 475
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK--A 485
A+ ++ G + LYDT+G ++ + +A + LT+ + FE+ + KE SK
Sbjct: 476 -AKQKGFGKLHGADVWRLYDTFGFPVDLTRLMAEERGLTIDNAEFEEARLKAKEASKGQG 534
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
K ++V + + DL DD K + + ++ + + + I +
Sbjct: 535 KRTADVVKLTVHDLGLLETMDDVPKTN-----DDAKFGRGNITSQIKAIYYNKKF----- 584
Query: 546 HAIRHARSGASIDSIQ-LEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
+DS + + G+I D+TN YA GGQ +D G + +GK E
Sbjct: 585 -----------VDSTKDIPQGEQFGIILDRTNFYAEQGGQENDTGKIII------DGKAE 627
Query: 605 IG--ELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+ ++ G I+H G + SF V + + E D R HT +H+LN ALR+
Sbjct: 628 LAVEDVQVYGGYILHTGFMKYGSFNVNDSVIA--EYDELRRWPIRNNHTGTHILNFALRQ 685
Query: 662 VL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL QK V +++ DFS + +S + +E+ D I V + + +
Sbjct: 686 VLGDGIEQKGSLVAAEKLRFDFS-HKSAVSDSDLEKIERISTDYIRQNCAVYAKDVPLAI 744
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDK-----ENV-------ISREPCCGTHVFNTGHIE 768
++ + + GE YPD V ++ + + +NV IS E C GTHV TG I+
Sbjct: 745 ARGISGVRAVFGETYPDPVRVVSVGVELEEILQNVHDPRWKDISIEFCGGTHVQKTGDIK 804
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHL 803
++ G+R I +TG+ + + A E G+ L
Sbjct: 805 DLVILEESGIAKGIRRIIAVTGEEAHEVQRIAKEFGERL 843
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 55/107 (51%), Gaps = 27/107 (25%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM Q+K++FLG A R NSQK
Sbjct: 128 VPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDFATLRRAHNSQK----------------- 170
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
TFFEMLGNWSF DY+K++A R + + LTK L DRLY T+
Sbjct: 171 ----TFFEMLGNWSFGDYFKKEAIRYSWDLLTK-VYGLNPDRLYVTY 212
>gi|399023720|ref|ZP_10725774.1| alanine--tRNA ligase [Chryseobacterium sp. CF314]
gi|398082249|gb|EJL73007.1| alanine--tRNA ligase [Chryseobacterium sp. CF314]
Length = 867
Score = 359 bits (922), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 256/815 (31%), Positives = 392/815 (48%), Gaps = 97/815 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FLDYF ++GH +V S+PIV D ++ F NSGM QFK+ FLG PR
Sbjct: 1 MTSQEIRQKFLDYF-KSKGHLIVPSAPIVLKDDPTLMFNNSGMAQFKDFFLGYKTPAAPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+K+DA A E LT
Sbjct: 60 IADTQKCLRVSGKHNDLDDVGRDTYHHTMFEMLGNWSFGDYFKKDAIAFAWELLT-GVYG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F G L D++ D W + + D I K NFWEMG +GPCG
Sbjct: 119 IPKENLYVTIFEGDAAENLERDQDAYDFW-KSHISEDRIINGNKKDNFWEMGESGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ S L VN D ++E+WN+VF+ R + ++ L ++DTG+
Sbjct: 178 SEIHVDLRTPEEKAKISGLDLVNNDHPQVVEVWNLVFMEFNRKADKSLEKLPARHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ K+S YDTD+F PL+ +E++SG K +T + + D + R++ D+
Sbjct: 238 GFERLCMALQGKSSNYDTDVFTPLIAKVEELSGKK-----YTGTLEDEKDIAIRVVVDHI 292
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++ A+AD P + +R ++R + S +K+ L K L + E +G +
Sbjct: 293 RAVSFAIADGQLPSSGGAGYVIRRILRRGISYSYRFLGMKEPFLYK-LVAVLQEQMGKFF 351
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ + ++ + E E F E GL+ K +
Sbjct: 352 PELEKQGTLVTEVI------------------------KSEEESFLKTIETGLIRVEKLI 387
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ +A + I + F LYDTYG ++ + +A K LT+ E F+ + + + RSK
Sbjct: 388 QQTIADNQKI--LPTLEVFELYDTYGFPDDLTRIIAEEKGLTIDEEGFKAEREKQRLRSK 445
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
+A V YD+ T D N VG D++ +
Sbjct: 446 EDSAQKV-------------------YDW--------VTLEERDENFVGY---DKIES-E 474
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
+ R+ + ++ + + ++ +T Y GGQI D G+ L N + +
Sbjct: 475 TYITRYRK-------VENKDGEFYQVVLSETPFYPEGGGQIGDKGI--LENAVE---SFD 522
Query: 605 IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL- 663
+ E G I+ +++S G +V+A R H+ +HLL+ ALR VL
Sbjct: 523 VLETKKENGLII---SLISGLPKDAGAVFYAKVNAADRKNSQANHSVTHLLHEALREVLG 579
Query: 664 TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPF 723
T QK V D DFS + + ++ + +A VE +N I + + + + F
Sbjct: 580 THVEQKGSFVGPDYLRFDFSHFNK-MTEEELALVENKVNQKIKDSIALQEFRNIPIKEAF 638
Query: 724 LTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVR 783
T + GE Y D V +I S+E C GTHV NT I ++ S G+R
Sbjct: 639 DKGATGLFGEKYGDYVRMIQFGS-----SKELCGGTHVKNTIEIGHFKIVSESSAAAGIR 693
Query: 784 SIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNI 818
I+ ++GD S+ +N + T SQ+L +I
Sbjct: 694 RIEAISGDKSEEYFKNLEKQVT--ELSQLLKSKDI 726
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK+ FLG PR+A++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFNNSGMAQFKDFFLGYKTPAAPRIADTQKCLRVSGKHNDLDDVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K+DA A E LT +P + LY T
Sbjct: 92 LGNWSFGDYFKKDAIAFAWELLT-GVYGIPKENLYVT 127
>gi|404484999|ref|ZP_11020203.1| alanyl-tRNA synthetase [Barnesiella intestinihominis YIT 11860]
gi|404340004|gb|EJZ66435.1| alanyl-tRNA synthetase [Barnesiella intestinihominis YIT 11860]
Length = 872
Score = 359 bits (922), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 263/792 (33%), Positives = 377/792 (47%), Gaps = 107/792 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF D+F +GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKEIRESFKDFF-RERGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNVPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A + E+L
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGLDTYHHTMFEMLGNWSFGDYFKKEAIDWSWEYLVD---V 117
Query: 132 LPLD--RLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
L +D RLY T F G GL D E W E +P+DHI NFWEMG TGPCG
Sbjct: 118 LKIDPARLYATVFEGYASEGLERDNEAASYW-EAHLPKDHIINGNRHDNFWEMGDTGPCG 176
Query: 190 YSSEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ + A L VN +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 177 PCSEIHIDLRSDAERAEVDGLKLVNQSHPQVIEIWNLVFMQYNRKADGSLEPLPARVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P++ I ++ G K YG + +D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPIIGEIGRLCG-KKYG------DDPKVDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ L K L I E +GD
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFLYKLLDILI-ETMGD 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE++ I ++ EE F LR L G+K
Sbjct: 349 AYPELKAQKVLIGKVIKEEEDAF--LRT--------------------------LETGIK 380
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K A + +EISG AF LYDTYG ++ + + K L + + F ++ + K
Sbjct: 381 LLDKVTADTKAAGKSEISGRDAFVLYDTYGFPLDLTELILKEKGLGVDIDEFNAQMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
ER++ AA D + L V D
Sbjct: 441 ERARNAAAVETGD------------------------------WVVLKEGEPEFVGYDMT 470
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
C D +R+ + ++ + + ++ D+T YA GGQ+ D G N
Sbjct: 471 EC-DAEILRYRK-------VKQKAREFYQIVLDRTPFYAEMGGQVGDTG-----KLISGN 517
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
VEI + +H + VT + ++ +AR C HT +HLL+ ALR
Sbjct: 518 DIVEILQTKRENNLSIHIAERLPE-DVTATFHAVIDKEARRATAC--NHTATHLLHEALR 574
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR-RHMRA 718
VL T QK V DFS + + ++ + + VE N + + +D R++
Sbjct: 575 EVLGTHVEQKGSYVSPQSLRFDFSHF-QKVTDEELRKVEMIANRKVREAIPLDEHRNVPI 633
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+E + + + GE Y ++V +I S E C GTHV NTG+I +I S
Sbjct: 634 AEAKAMGAMALF-GEKYGEEVRVIRFGS-----SVELCGGTHVSNTGNIGMIKIITESSI 687
Query: 779 NHGVRSIKCLTG 790
G+R I+ +TG
Sbjct: 688 AAGIRRIEAITG 699
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 69/99 (69%), Gaps = 5/99 (5%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNVPAKYKRVADSQKCLRVSGKHNDLEEVGLDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLD--RLYFT 918
LGNWSF DY+K++A + E+L L +D RLY T
Sbjct: 93 LGNWSFGDYFKKEAIDWSWEYLVD---VLKIDPARLYAT 128
>gi|298480309|ref|ZP_06998507.1| alanine--tRNA ligase [Bacteroides sp. D22]
gi|298273590|gb|EFI15153.1| alanine--tRNA ligase [Bacteroides sp. D22]
Length = 872
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 264/795 (33%), Positives = 387/795 (48%), Gaps = 113/795 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKEIRDSFKNFF-ESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYQR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D+E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLSRDDEAASYWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P+L+ I +SG + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGTE-YGKD------KQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +G+
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DNMGE 348
Query: 363 VYPEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
YPE+ Q ++ + + EES ++T L G
Sbjct: 349 AYPELVAQKTLIEKVIKEEEES----------------FLRT--------------LETG 378
Query: 421 VKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
++ L K + + TEISG AFTLYDT+G ++ + + +T+ E F +++ +
Sbjct: 379 IRLLDKTMEDTKANGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNIEEFNEEMQQ 438
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIG 537
K+R++ AA + D + LK T + YDY Y+ + RY
Sbjct: 439 QKQRARNAAA--IETGDWIVLKEG--TTEFVGYDYTEYEASILRYR-------------- 480
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
I+ ++ ++ D T YA +GGQ+ D GV
Sbjct: 481 ---------------------QIKQKNQTLYQIVLDYTPFYAESGGQVGDTGV-----LV 514
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
E +E+ + +H + P + VD R C H+ +HLL+A
Sbjct: 515 SEFETIEVVDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDA 571
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRH 715
ALR VL QK V D DFS + + ++ + + VE +N I AN + R+
Sbjct: 572 ALREVLGEHIEQKGSLVTPDSLRFDFSHF-QKVTDEEIRKVEHIVNARIRANIPLKEYRN 630
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ E L + + GE Y D V +I S E C GTHV TG+I +I
Sbjct: 631 IPIEEAKELGAIALF-GEKYGDRVRVIQFG-----TSIEFCGGTHVAATGNIGMVKIISE 684
Query: 776 KSYNHGVRSIKCLTG 790
S GVR I+ TG
Sbjct: 685 SSVAAGVRRIEAYTG 699
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYQRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E+L + + L + LY T
Sbjct: 93 LGNWSFGDYFKKEAINWAWEYLVE-VLKLNPEHLYAT 128
>gi|255015752|ref|ZP_05287878.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_7]
gi|410104789|ref|ZP_11299701.1| alanyl-tRNA synthetase [Parabacteroides sp. D25]
gi|409233801|gb|EKN26635.1| alanyl-tRNA synthetase [Parabacteroides sp. D25]
Length = 873
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 262/799 (32%), Positives = 398/799 (49%), Gaps = 107/799 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF +F + + H +V S+P+V GD ++ F N+GM QFK++ LG P YPR
Sbjct: 2 LTAKEIRESFKQFFASKE-HQIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNVPRKYPR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +RLY T F GS GL D E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPERLYATVFEGSPAEGLDRDNEAAGYW-EQYLPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + A VN D +IEIWN+VF+ R + ++ PL IDTG+
Sbjct: 179 SEIHIDLRSDEERAAVSGADMVNKDHPQVIEIWNLVFMQFNRKADGSLEPLPAKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F P+++ I ++G T+ T + D+ + R+++D+
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPIIKVIAGMAGT-----TYGTDKQQDI--AMRVIADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I A+ D P A +R ++R A+ K+ + K L I E +GD Y
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLDRKEAFMYKLLPVLI-ETMGDAY 350
Query: 365 PEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
PE+ Q ++ + + EES ++T L G++
Sbjct: 351 PELIAQKTLIEKVIKEEEES----------------FLRT--------------LETGIR 380
Query: 423 YLTKQLARDPSI--TEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K++ + T ++G AFTLYDTYG ++ + + + E F + + + K
Sbjct: 381 LLDKKMEETKAAGKTVLNGVDAFTLYDTYGFPLDLTELILRENGMEADIEEFNKAMQKQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
ER++ AA + D + LK + + K+ +G +
Sbjct: 441 ERARNAAA--IETGDWITLK-----EGECKF------------------------VGYDL 469
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
F + +R+ + I+ ++ ++ D+T YA GGQ+ D G +L ++
Sbjct: 470 FECEAEILRYRQ-------IKQKNKVLYQIVLDQTPFYAEMGGQVGDTG--WL---IADD 517
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
K+++ + VH + VT T+++ V R++ C H+ +HLL+ ALR
Sbjct: 518 EKIDVIDTKRENNLPVHLVTKLPK-DVTATFTAKINVKKRIQCEC--NHSATHLLHEALR 574
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMRA 718
VL T QK V D DFS + + ++ + + VE + + I AN + R+M
Sbjct: 575 EVLGTHVEQKGSYVSPDSLRFDFSHF-QKVTDEEIRKVEILVGEKIRANFPLEEHRNMPI 633
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+E L + + GE Y D+V ++ S E C GTH+ TG I S VIG S
Sbjct: 634 AEAKALGAMALF-GEKYGDEVRVVKYGS-----SVELCGGTHIPATGMIGSLRVIGESSI 687
Query: 779 NHGVRSIKCLTGDSSKAAV 797
GVR I+ +T + ++ V
Sbjct: 688 AAGVRRIEAVTAEGAEQFV 706
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++ LG P YPRVA+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 32 GDPTLMFTNAGMNQFKDIILGNVPRKYPRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 91
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K++A A E+L + + L +RLY T
Sbjct: 92 MLGNWSFGDYFKKEAINWAWEYLVE-VLKLNPERLYAT 128
>gi|423248728|ref|ZP_17229744.1| alanyl-tRNA synthetase [Bacteroides fragilis CL03T00C08]
gi|423253677|ref|ZP_17234608.1| alanyl-tRNA synthetase [Bacteroides fragilis CL03T12C07]
gi|392655306|gb|EIY48949.1| alanyl-tRNA synthetase [Bacteroides fragilis CL03T12C07]
gi|392657669|gb|EIY51300.1| alanyl-tRNA synthetase [Bacteroides fragilis CL03T00C08]
Length = 872
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 264/793 (33%), Positives = 381/793 (48%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K R SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKETRDSFKNFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYHR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + L D E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEDLERDNEAASYW-EQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + T+ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSTLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F PL++ I +++G + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPLIKAIAQMAGTE-YGKNEQN------DIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +GD
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DSMGD 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ A KE V + E +E G++
Sbjct: 349 AYPEL-----------------------IAQKELIEKVIKEEEESFLRTLE-----TGIR 380
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K +A + TEISG AFTLYDT+G ++ + + +T+ E F+ ++ + K
Sbjct: 381 LLDKTMADTKANGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNVEEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA D ++ T + YDY Y+T+ RY
Sbjct: 441 QRARNAAAIETGDWIILK----EGTTEFVGYDYTEYETSILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
++ ++ ++ D T YA +GGQ+ D GV L N E
Sbjct: 481 -------------------QVKQKNQTLYQIVLDYTPFYAESGGQVGDTGV--LVN---E 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + P + VD R C H+ +HLL+ AL
Sbjct: 517 FETIEVIDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDEAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEELRKVEHLVNAKIRANVPLQEHRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y D V +I S E C GTHV TG+I +I S
Sbjct: 633 IEEAKELGAIALF-GEKYGDHVRVIQFGS-----SIEFCGGTHVAATGNIGMVKIISESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYHRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|262408299|ref|ZP_06084846.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_22]
gi|294645925|ref|ZP_06723596.1| alanine--tRNA ligase [Bacteroides ovatus SD CC 2a]
gi|294805880|ref|ZP_06764750.1| alanine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
gi|345512130|ref|ZP_08791667.1| alanyl-tRNA synthetase [Bacteroides sp. D1]
gi|423212124|ref|ZP_17198653.1| alanyl-tRNA synthetase [Bacteroides xylanisolvens CL03T12C04]
gi|262353851|gb|EEZ02944.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_22]
gi|292638725|gb|EFF57072.1| alanine--tRNA ligase [Bacteroides ovatus SD CC 2a]
gi|294446909|gb|EFG15506.1| alanine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
gi|295086606|emb|CBK68129.1| alanyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
gi|345453941|gb|EEO51422.2| alanyl-tRNA synthetase [Bacteroides sp. D1]
gi|392695012|gb|EIY88237.1| alanyl-tRNA synthetase [Bacteroides xylanisolvens CL03T12C04]
Length = 872
Score = 359 bits (921), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 264/795 (33%), Positives = 387/795 (48%), Gaps = 113/795 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKEIRDSFKNFF-ESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYQR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVEV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D+E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLSRDDEAASYWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P+L+ I +SG + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGTE-YGKD------KQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +G+
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DNMGE 348
Query: 363 VYPEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
YPE+ Q ++ + + EES ++T L G
Sbjct: 349 AYPELVAQKTLIEKVIKEEEES----------------FLRT--------------LETG 378
Query: 421 VKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
++ L K + + TEISG AFTLYDT+G ++ + + +T+ E F +++ +
Sbjct: 379 IRLLDKTMEDTKANGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNIEEFNEEMQQ 438
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIG 537
K+R++ AA + D + LK T + YDY Y+ + RY
Sbjct: 439 QKQRARNAAA--IETGDWIVLKEG--TTEFVGYDYTEYEASILRYR-------------- 480
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
I+ ++ ++ D T YA +GGQ+ D GV
Sbjct: 481 ---------------------QIKQKNQTLYQIVLDYTPFYAESGGQVGDTGV-----LV 514
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
E +E+ + +H + P + VD R C H+ +HLL+A
Sbjct: 515 SEFETIEVVDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDA 571
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRH 715
ALR VL QK V D DFS + + ++ + + VE +N I AN + R+
Sbjct: 572 ALREVLGEHIEQKGSLVTPDSLRFDFSHF-QKVTDEEIRKVEHIVNARIRANIPLKEYRN 630
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ E L + + GE Y D V +I S E C GTHV TG+I +I
Sbjct: 631 IPIEEAKELGAIALF-GEKYGDRVRVIQFG-----TSIEFCGGTHVAATGNIGMVKIISE 684
Query: 776 KSYNHGVRSIKCLTG 790
S GVR I+ TG
Sbjct: 685 SSVAAGVRRIEAYTG 699
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYQRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E+L + + L + LY T
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYLVE-VLKLNPEHLYAT 128
>gi|218961963|ref|YP_001741738.1| alanyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
gi|167730620|emb|CAO81532.1| alanyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans str.
Evry]
Length = 866
Score = 359 bits (921), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 259/797 (32%), Positives = 390/797 (48%), Gaps = 106/797 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ SK IR F+D+F N +GH V SSP++P D ++ F N+GM QFK++FLG Y R
Sbjct: 2 ISSKEIRQQFIDFFLN-RGHIFVPSSPVIPEDDPTLLFANAGMNQFKSIFLGQKEITYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V NSQKC+R GGKHNDL G+D YHHTFFEMLGNWSF DYYK++A A E LT+
Sbjct: 61 VVNSQKCIRAGGKHNDLEEVGKDGYHHTFFEMLGNWSFGDYYKKEAISWAWELLTE-VWK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+P D+LY T + D E +IW E + HI K NFWEMG TGPCG
Sbjct: 120 IPKDKLYATVY--------KTDTEAFEIWKQETDIDPTHISYFDDKDNFWEMGETGPCGP 171
Query: 191 SSEIHYD-------MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYI 243
SEIH D + EP + ++N + IE+WN+VFI + R + T+ PL ++
Sbjct: 172 CSEIHIDRGSSHCTRQNEPGH-ICKINGGCSRFIELWNLVFIQYNREADKTLSPLKNKFV 230
Query: 244 DTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRML 303
DTG GFERL +LQ+K S Y+TDLF+PL+ IE++SG + + +R++
Sbjct: 231 DTGAGFERLAQVLQDKNSNYETDLFMPLINKIEELSG---------VAYTQETGMPHRVI 281
Query: 304 SDYSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+D+ R + ALAD FP N R +L + G+L LG
Sbjct: 282 ADHIRCLCFALADGGFPS------NEGRGYVLRRILRRAARYGRL-----------LGFA 324
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
P + + L++ + + F L +++ +V + E E+FN + GL +
Sbjct: 325 EPFLHLL---VPLVIEQMAHHFSELN--GKEDYIKMV-IKAEEERFNKTLDTGLE-KFRE 377
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
+T++L + ISG AF LYDTYG ++ LA K L + +E FE+++ +R
Sbjct: 378 ITQKLKGEV----ISGSDAFILYDTYGFPPDLTAILAEEKGLKIDYEGFEKEMQ--LQRK 431
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+A+ AS F +D ++ P T VG I
Sbjct: 432 RARKASK--------FTLFVNNEDWIEFS------------PVTPTEFVGYKENTVQTYI 471
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
++AI + + + +T YA +GGQ+ D G Y E ++
Sbjct: 472 QRYAI--------------QEKGLILMQLAQTPFYAESGGQVSDTGKIY-----NEEFEL 512
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
EI + + I+H+G + +T+ E+D R R HT +HLL+ ALR VL
Sbjct: 513 EITNVRKQDEYIIHYGKLKRGTVNNAPVTA--EIDRERRKSIARNHTATHLLHKALREVL 570
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
T QK V SD DF+ + L+++ + VE +N + + +V + ++ E
Sbjct: 571 GEHTVQKGSLVHSDYLRFDFAHF-RALTLEEIRKVEDIVNQAVLDNRKV-KTTVKNIEEA 628
Query: 723 FLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGV 782
+ GE Y + V ++ + + S+E C GTH+ +TG I +I S G+
Sbjct: 629 KKEGAIALFGEKYSEKVRVVCVEN----FSQELCGGTHISSTGEIGLFKIISESSSAAGI 684
Query: 783 RSIKCLTGDSSKAAVEN 799
R I+ +TG S+ V++
Sbjct: 685 RRIEAITGISALKWVQD 701
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK++FLG Y RV NSQKCIR GGKHNDL G+D YHHT
Sbjct: 29 IPEDDPTLLFANAGMNQFKSIFLGQKEITYKRVVNSQKCIRAGGKHNDLEEVGKDGYHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK++A A E LT+ +P D+LY T
Sbjct: 89 FFEMLGNWSFGDYYKKEAISWAWELLTE-VWKIPKDKLYAT 128
>gi|336403938|ref|ZP_08584643.1| alanyl-tRNA synthetase [Bacteroides sp. 1_1_30]
gi|335944102|gb|EGN05927.1| alanyl-tRNA synthetase [Bacteroides sp. 1_1_30]
Length = 872
Score = 359 bits (921), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 264/795 (33%), Positives = 387/795 (48%), Gaps = 113/795 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKEIRDSFKNFF-ESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYQR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVEV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D+E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLSRDDEAASYWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P+L+ I +SG + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPMLKAIATMSGTE-YGKD------KQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +G+
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DNMGE 348
Query: 363 VYPEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
YPE+ Q ++ + + EES ++T L G
Sbjct: 349 AYPELVAQKTLIEKVIKEEEES----------------FLRT--------------LETG 378
Query: 421 VKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
++ L K + + TEISG AFTLYDT+G ++ + + +T+ E F +++ +
Sbjct: 379 IRLLDKTMEDTKANGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNIEEFNEEMQQ 438
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIG 537
K+R++ AA + D + LK T + YDY Y+ + RY
Sbjct: 439 QKQRARNAAA--IETGDWIVLKEG--TTEFVGYDYTEYEASILRYR-------------- 480
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
I+ ++ ++ D T YA +GGQ+ D GV
Sbjct: 481 ---------------------QIKQKNQTLYQIVLDYTPFYAESGGQVGDTGV-----LV 514
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
E +E+ + +H + P + VD R C H+ +HLL+A
Sbjct: 515 SEFETIEVVDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDA 571
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRH 715
ALR VL QK V D DFS + + ++ + + VE +N I AN + R+
Sbjct: 572 ALREVLGEHIEQKGSLVTPDSLRFDFSHF-QKVTDEEIRKVEHIVNARIRANIPLKEYRN 630
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ E L + + GE Y D V +I S E C GTHV TG+I +I
Sbjct: 631 IPIEEAKELGAIALF-GEKYGDRVRVIQFG-----TSIEFCGGTHVAATGNIGMVKIISE 684
Query: 776 KSYNHGVRSIKCLTG 790
S GVR I+ TG
Sbjct: 685 SSVAAGVRRIEAYTG 699
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYQRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E+L + + L + LY T
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYLVE-VLKLNPEHLYAT 128
>gi|78188347|ref|YP_378685.1| alanyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
gi|123580381|sp|Q3ATN3.1|SYA_CHLCH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|78170546|gb|ABB27642.1| alanyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
Length = 886
Score = 359 bits (921), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 265/813 (32%), Positives = 394/813 (48%), Gaps = 132/813 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR SFLD+F +GHT+V+S+P++P D ++ F N+GM QFK+VFL PY R
Sbjct: 1 MKSHEIRQSFLDFFAQ-KGHTIVRSAPVIPADDPTLLFTNAGMNQFKDVFLDKGSRPYVR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A++QKC+R GKHNDL GRD+YHHTFFEMLGNWSF DYYK +A A E T
Sbjct: 60 AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKLEAITWAWELFT-VVWK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLE-LGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RLY T + D+E+ IW E + DHI + G K NFWEMG TGPCG
Sbjct: 119 LPKERLYATVY--------QDDDESFQIWKEQTDINPDHILRFGDKDNFWEMGETGPCGP 170
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIH D+ + S VN +IE+WN+VFI + R S + PL K ++DTG+GFE
Sbjct: 171 CSEIHIDLTPD-GSGKELVNVGDYRVIELWNLVFIQYNRQSDGHLEPLPKKHVDTGMGFE 229
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+V ++Q K S YD+D+F PL + I +++G + YG + N D + R+++D++R +
Sbjct: 230 RIVAVMQGKGSNYDSDVFQPLFDKITEITGVR-YGASLDAPN----DIAMRVIADHARTL 284
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVKQG---KLVKELSYNIAEILGDVYPEI 367
T AL+D P + + R V +L + G ++ +L +A +G+V+PE+
Sbjct: 285 TFALSDGAMP--SNEGRGYVLRRILRRALRYSRNLGYHQPILHQLVGTLALAMGEVFPEL 342
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ I+ + E E F + + G+ L + + K
Sbjct: 343 VQRQEAVSAII------------------------KAEEESFIVTLDRGIDLFSELVEKL 378
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
A + + I+G AF LYDTYG ++ + +AA + + E FE + E K R+++
Sbjct: 379 RASNGKV--IAGSDAFRLYDTYGFPFDLTRLMAADEGFEVDGEGFEHCMQEQKNRARS-- 434
Query: 488 ASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHA 547
D + + V DD K+ + D + ++
Sbjct: 435 -------DRREKQR--VDDDGAKWQWFSDVRASQFV-----------------------G 462
Query: 548 IRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGE 607
H A+I I+ + N + L+ D T YA +GGQ D G +L N+ ++ + +
Sbjct: 463 YDHLVHSATITGIR-QGNGKLLLVLDATPFYAESGGQTGDNG--WLENSRY---RLHVAD 516
Query: 608 LASLEGKIVH-----FGNVVSSFKVTPGLTSRVE--------VDARMRLGCMRAHTTSHL 654
IVH F V S V P VE V R R HT +HL
Sbjct: 517 TVKDGDAIVHVVSDAFDKVQDS-AVQPEDVEIVEQELAVAASVHRTARQDAERNHTATHL 575
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
++AALRR+L QK V + DFS + + L+ + + AVE +N I
Sbjct: 576 MHAALRRILGEHVQQKGSFVSPERLRFDFSHFSK-LTDEEIEAVEIAVNTQI-------- 626
Query: 714 RHMRASELPFLTHLTVI------------PGEIYPDDVILIDISDKENVISREPCCGTHV 761
R +E P + H V+ G+ Y D V +++I +S E C GTHV
Sbjct: 627 ---REAE-PVVKHADVLFDDAVAKGALAFFGDKYADRVRVVEIPG----MSVELCGGTHV 678
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSK 794
N G I +I S GVR I+ +TG +++
Sbjct: 679 DNIGRIGLFKIISEASVASGVRRIEAVTGKAAE 711
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFL PY R A++QKCIR GKHNDL GRD+YHHT
Sbjct: 28 IPADDPTLLFTNAGMNQFKDVFLDKGSRPYVRAADTQKCIRASGKHNDLEDVGRDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK +A A E T LP +RLY T
Sbjct: 88 FFEMLGNWSFGDYYKLEAITWAWELFT-VVWKLPKERLYAT 127
>gi|237719250|ref|ZP_04549731.1| alanyl-tRNA synthetase [Bacteroides sp. 2_2_4]
gi|293372256|ref|ZP_06618641.1| alanine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
gi|336415597|ref|ZP_08595936.1| alanyl-tRNA synthetase [Bacteroides ovatus 3_8_47FAA]
gi|229451629|gb|EEO57420.1| alanyl-tRNA synthetase [Bacteroides sp. 2_2_4]
gi|292632698|gb|EFF51291.1| alanine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
gi|335940476|gb|EGN02343.1| alanyl-tRNA synthetase [Bacteroides ovatus 3_8_47FAA]
Length = 872
Score = 359 bits (921), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 264/795 (33%), Positives = 387/795 (48%), Gaps = 113/795 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKEIRDSFKNFF-ESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYQR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVEV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D+E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLSRDDEAASYWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P+L+ I +SG + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGTE-YGKD------KQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +G+
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DNMGE 348
Query: 363 VYPEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
YPE+ Q ++ + + EES ++T L G
Sbjct: 349 AYPELVAQKTLIEKVIKEEEES----------------FLRT--------------LETG 378
Query: 421 VKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
++ L K + + TEISG AFTLYDT+G ++ + + +T+ E F +++ +
Sbjct: 379 IRLLDKTMEDTKANGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNIEEFNEEMQQ 438
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIG 537
K+R++ AA + D + LK T + YDY Y+ + RY
Sbjct: 439 QKQRARNAAA--IETGDWIVLKEG--TTEFVGYDYTEYEASILRYR-------------- 480
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
I+ ++ ++ D T YA +GGQ+ D GV
Sbjct: 481 ---------------------QIKQKNQTLYQIVLDYTPFYAESGGQVGDTGV-----LV 514
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
E +E+ + +H + P + VD R C H+ +HLL+A
Sbjct: 515 SEFETIEVVDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDA 571
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRH 715
ALR VL QK V D DFS + + ++ + + VE +N I AN + R+
Sbjct: 572 ALREVLGEHIEQKGSLVTPDSLRFDFSHF-QKVTDEEIRKVEHIVNARIRANIPLKEYRN 630
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ E L + + GE Y D V +I S E C GTHV TG+I +I
Sbjct: 631 IPIEEAKELGAIALF-GEKYGDRVRVIQFG-----TSIEFCGGTHVAATGNIGMVKIISE 684
Query: 776 KSYNHGVRSIKCLTG 790
S GVR I+ TG
Sbjct: 685 SSVAAGVRRIEAYTG 699
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYQRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E+L + + L + LY T
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYLVE-VLKLNPEHLYAT 128
>gi|301310907|ref|ZP_07216836.1| alanine--tRNA ligase [Bacteroides sp. 20_3]
gi|423339235|ref|ZP_17316976.1| alanyl-tRNA synthetase [Parabacteroides distasonis CL09T03C24]
gi|300830970|gb|EFK61611.1| alanine--tRNA ligase [Bacteroides sp. 20_3]
gi|409231137|gb|EKN23994.1| alanyl-tRNA synthetase [Parabacteroides distasonis CL09T03C24]
Length = 873
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 262/799 (32%), Positives = 398/799 (49%), Gaps = 107/799 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF +F + + H +V S+P+V GD ++ F N+GM QFK++ LG P YPR
Sbjct: 2 LTAKEIRESFKQFFASKE-HQIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNVPRKYPR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +RLY T F GS GL D E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPERLYATVFEGSPAEGLDRDNEAAGYW-EQYLPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + A VN D +IEIWN+VF+ R + ++ PL IDTG+
Sbjct: 179 SEIHIDLRSDEERAAVSGADMVNKDHPQVIEIWNLVFMQFNRKADGSLEPLPAKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F P+++ I ++G T+ T + D+ + R+++D+
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPIIKVIAGMAGT-----TYGTDKQQDI--AMRVIADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I A+ D P A +R ++R A+ K+ + K L I E +GD Y
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLDRKEAFMYKLLPVLI-ETMGDAY 350
Query: 365 PEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
PE+ Q ++ + + EES ++T L G++
Sbjct: 351 PELIAQKTLIEKVIKEEEES----------------FLRT--------------LETGIR 380
Query: 423 YLTKQLARDPSI--TEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K++ + T ++G AFTLYDTYG ++ + + + E F + + + K
Sbjct: 381 LLDKKMEETKAAGKTVLNGVDAFTLYDTYGFPLDLTELILRENGMEADIEEFNKAMQKQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
ER++ AA + D + LK + + K+ +G +
Sbjct: 441 ERARNAAA--IETGDWITLK-----EGECKF------------------------VGYDL 469
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
F + +R+ + I+ ++ ++ D+T YA GGQ+ D G +L ++
Sbjct: 470 FECEAEILRYRQ-------IKQKNKVLYQIVLDQTPFYAEMGGQVGDTG--WL---IADD 517
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
K+++ + VH + VT T+++ V R++ C H+ +HLL+ ALR
Sbjct: 518 EKIDVIDTKRENNLPVHLVAKLPK-DVTATFTAKINVKKRIQCEC--NHSATHLLHEALR 574
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMRA 718
VL T QK V D DFS + + ++ + + VE + + I AN + R+M
Sbjct: 575 EVLGTHVEQKGSYVSPDSLRFDFSHF-QKVTDEEIRKVEILVGEKIRANFPLEEHRNMPI 633
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+E L + + GE Y D+V ++ S E C GTH+ TG I S VIG S
Sbjct: 634 AEAKALGAMALF-GEKYGDEVRVVKYGS-----SVELCGGTHIPATGMIGSLRVIGESSI 687
Query: 779 NHGVRSIKCLTGDSSKAAV 797
GVR I+ +T + ++ V
Sbjct: 688 AAGVRRIEAVTAEGAEQFV 706
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++ LG P YPRVA+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 32 GDPTLMFTNAGMNQFKDIILGNVPRKYPRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 91
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K++A A E+L + + L +RLY T
Sbjct: 92 MLGNWSFGDYFKKEAINWAWEYLVE-VLKLNPERLYAT 128
>gi|406673591|ref|ZP_11080812.1| alanine-tRNA ligase [Bergeyella zoohelcum CCUG 30536]
gi|405586056|gb|EKB59848.1| alanine-tRNA ligase [Bergeyella zoohelcum CCUG 30536]
Length = 865
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 250/798 (31%), Positives = 376/798 (47%), Gaps = 111/798 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FLD+F ++GH +V S+PIV D ++ F NSGM QFK+ FLG R
Sbjct: 1 MTSQEIRQKFLDFF-KSKGHEIVPSAPIVLKDDPTLMFSNSGMTQFKDFFLGYKQPSSLR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+K++A A E LT
Sbjct: 60 VADTQKCLRVSGKHNDLDDVGRDTYHHTMFEMLGNWSFGDYFKKEAIEWAWELLT-GVYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + +Y T F G L D+E + W + + D I K NFWEMG GPCG
Sbjct: 119 IPKENIYVTIFEGDASENLDRDQEAYNFW-KAHISEDRILNGNKKDNFWEMGEQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E A VN D +IE+WN+VF+ R + ++ L K +DTG+
Sbjct: 178 SEIHIDLRSEEEKAKISGKELVNQDHPQVIEVWNLVFMEFNRKADGSLEKLPKQNVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ K+S YDTD+F PL+E +E++S K G+ + D + R++ D+
Sbjct: 238 GFERLCMALQGKSSNYDTDVFTPLIEKVEEISSKKYEGKL-----EDEKDIAIRVIVDHI 292
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + A+AD P + + + + F ++ + +L + + +G+ +P
Sbjct: 293 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLGQKEPFIYQLVDTLVQHMGEAFP 352
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ + +Q ++ EE F LR LEQ GL+ +
Sbjct: 353 ELKKQHHLVQNVIREEENSF--LRT---------------LEQ-------GLL-----ML 383
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ + EISG AF LYDTYG ++ + A K TL FE+ L + KERS+A
Sbjct: 384 DAMMNNAENKEISGSKAFELYDTYGFPIDLTALILAEKGFTLDEAGFEENLKKQKERSRA 443
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A + D ++ DD +T +G + I +
Sbjct: 444 AAQTKTDDWVVIR------EDD--------------------ETEFIGYDATEGTVRITQ 477
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
+ R S Q L+F+ T Y GGQ+ D G + Y+ +T
Sbjct: 478 Y--RKVESQKEGTQYQ--------LVFNVTPFYPEGGGQVGDKGFLTSASGEMTYILDTK 527
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+EN I+H + L + + + R HT +HLL+
Sbjct: 528 KEN------------NLIIHIAE-----SLPENLNESFKAEVKGRPLTEANHTATHLLHQ 570
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL T Q+ +V D DFS + + ++ + + AVEK +N+ I Q+ +
Sbjct: 571 ALREVLGTHVEQRGSKVDFDGLRFDFSHF-QKVTDEELQAVEKKVNERILQQIALKEHRS 629
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + + GE Y D V +I+ +D S+E C GTHV NT I +I
Sbjct: 630 ISMKEAMEAGAMALFGEKYGDKVRMIEFAD-----SKELCGGTHVKNTSDIWYFKIISEG 684
Query: 777 SYNHGVRSIKCLTGDSSK 794
+ G+R ++ +T + K
Sbjct: 685 AVASGIRRVEAITREKVK 702
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK+ FLG RVA++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFSNSGMTQFKDFFLGYKQPSSLRVADTQKCLRVSGKHNDLDDVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT +P + +Y T
Sbjct: 92 LGNWSFGDYFKKEAIEWAWELLT-GVYKIPKENIYVT 127
>gi|423294739|ref|ZP_17272866.1| alanyl-tRNA synthetase [Bacteroides ovatus CL03T12C18]
gi|392675930|gb|EIY69371.1| alanyl-tRNA synthetase [Bacteroides ovatus CL03T12C18]
Length = 872
Score = 358 bits (920), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 263/795 (33%), Positives = 387/795 (48%), Gaps = 113/795 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKEIRDSFKNFF-ESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYQR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D+E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLSRDDEAASYWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P+L+ I +SG + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGTE-YGKD------KQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +G+
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DNMGE 348
Query: 363 VYPEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
YPE+ Q ++ + + EES ++T L G
Sbjct: 349 AYPELVAQKTLIEKVIKEEEES----------------FLRT--------------LETG 378
Query: 421 VKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
++ L K + + TEISG AFTLYDT+G ++ + + +T+ E F +++ +
Sbjct: 379 IRLLDKTMEDTKANGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNIEEFNEEMQQ 438
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIG 537
K+R++ AA + D + LK T + YDY Y+ + RY
Sbjct: 439 QKQRARNAAA--IETGDWIVLKEG--TTEFVGYDYTEYEASILRYR-------------- 480
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
I+ ++ ++ D T YA +GGQ+ D GV
Sbjct: 481 ---------------------QIKQKNQTLYQIVLDYTPFYAESGGQVGDTGV-----LV 514
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
E +E+ + +H + P + VD R C H+ +HLL+A
Sbjct: 515 SEFETIEVVDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDA 571
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRH 715
ALR VL QK V D DFS + + ++ + + VE +N I AN + R+
Sbjct: 572 ALREVLGEHIEQKGSLVTPDSLRFDFSHF-QKVTDEEIRKVEHIVNARIRANIPLKEYRN 630
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ E L + + GE Y D V +I S E C GTHV TG+I +I
Sbjct: 631 IPIEEAKELGAIALF-GEKYGDRVRVIQFG-----TSIEFCGGTHVAATGNIGMVKIISE 684
Query: 776 KSYNHGVRSIKCLTG 790
S G+R I+ TG
Sbjct: 685 SSVAAGIRRIEAYTG 699
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYQRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E+L + + L + LY T
Sbjct: 93 LGNWSFGDYFKKEAINWAWEYLVE-VLKLNPEHLYAT 128
>gi|256419492|ref|YP_003120145.1| alanyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
gi|256034400|gb|ACU57944.1| alanyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
Length = 871
Score = 358 bits (920), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 250/794 (31%), Positives = 394/794 (49%), Gaps = 97/794 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FLD+F ++GH ++ S+PIV D ++ F N+GM QFK+ FLG + R
Sbjct: 1 MTAPEIRQQFLDFFA-SKGHHIMPSAPIVVKNDPTLLFTNAGMNQFKDYFLGNRAPAWKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A + E LT+
Sbjct: 60 VADTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAIDWSWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY T F G + L D+E + W + VP D I K NFWEMG TGPCG
Sbjct: 119 LPKDRLYVTVFEGDAKENLEKDQEAFEFW-KKHVPEDRILMGNKKDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D + + AL VNAD +IEIWN VF+ R+ ++ L ++DTG+
Sbjct: 178 SEIHVDCRPDSERALVDGKTLVNADDPQVIEIWNNVFMQFNRLKDRSLESLPAKHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV ++Q KTS YDTD+F + EK++G K YG T + D ++R+++D+
Sbjct: 238 GFERLVRVIQGKTSNYDTDVFSGTIGHTEKLTGLK-YGCTDSKP-----DVAFRVIADHI 291
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I+ A+AD P T +R ++R A+ K+ L+++L +A+ +V+
Sbjct: 292 RAISFAIADGQLPSNTGAGYVIRRILRRAVRYYFSFLNWKK-PLLQDLVPVLAQQFANVF 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ ++ +Q ++ EE F + ++ +E F +G
Sbjct: 351 PELLQQVDFVQKVVFEEENNFLRTLDSGIR----------RIEDF---------MGA--- 388
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
A++ S + G AF LYDTYG ++ +A+ + E F+ + E K+RS+
Sbjct: 389 ----AKEKS---VDGKTAFELYDTYGFPYDLTSLIASENGFSADKEGFDAAMKEQKDRSR 441
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
A ++D+ D + L+ N + +G ++ +
Sbjct: 442 A-----ATELDMGD-------------------------WTVLNENAESVFVGYELSETE 471
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
++ + I+ + L+ +T YA +GGQ+ D G+ T ++
Sbjct: 472 TSVAKYRK-------IKAKGKEQYQLVLSQTPFYAESGGQVGDTGILTFGAET-----IQ 519
Query: 605 IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL- 663
+ + IVHF V T++ ++ RL H+ +HLL+AALR+VL
Sbjct: 520 VTDTKKENNLIVHF---VDKLPANITTTAKAVINKNNRLSTTMNHSATHLLHAALRQVLG 576
Query: 664 TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPF 723
T QK V + DFS + + +S + +A +E+ +N+ I + V + + E
Sbjct: 577 THVAQKGSLVNPEYLRFDFSHFAK-VSDEELAQIEEIVNEKIRANIPVVIKELPKEEALK 635
Query: 724 LTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVR 783
L + + GE Y D V ++ + +V E C GTHV +TG + + GVR
Sbjct: 636 LGAMALF-GEKYGDVVRVVVMDPGYSV---ELCGGTHVGSTGELGIFKFTSEGAVAAGVR 691
Query: 784 SIKCLTGDSSKAAV 797
I+ +TG ++ A V
Sbjct: 692 RIEAVTGRNALAFV 705
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ FLG + RVA++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLLFTNAGMNQFKDYFLGNRAPAWKRVADTQKCLRVSGKHNDLEEVGIDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A + E LT+ LP DRLY T
Sbjct: 92 LGNWSFGDYFKKEAIDWSWELLTE-VYKLPKDRLYVT 127
>gi|423301760|ref|ZP_17279783.1| alanyl-tRNA synthetase [Bacteroides finegoldii CL09T03C10]
gi|408470851|gb|EKJ89383.1| alanyl-tRNA synthetase [Bacteroides finegoldii CL09T03C10]
Length = 872
Score = 358 bits (920), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 264/795 (33%), Positives = 385/795 (48%), Gaps = 113/795 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKEIRDSFKNFF-ESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D+E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLSRDDEAASYWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P+L+ I +S + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPMLKAIAAMSDTE-YGKD------KQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I E +G+
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-ENMGE 348
Query: 363 VYPEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
YPE+ Q ++ + + EES ++T L G
Sbjct: 349 AYPELIAQKTLIEKVIKEEEES----------------FLRT--------------LETG 378
Query: 421 VKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
++ L K + + TEISG AFTLYDT+G ++ + + +T+ E F +++ +
Sbjct: 379 IRLLDKTMEDTKAAGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNIEEFNEEMQQ 438
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIG 537
K+R++ AA + D + LK T + YDY Y+ + RY
Sbjct: 439 QKQRARNAAA--IETGDWITLKEG--TTEFVGYDYTEYEASILRYR-------------- 480
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
I+ ++ ++ D T YA +GGQ+ D GV
Sbjct: 481 ---------------------QIRQKNQTLYQIVLDYTPFYAESGGQVGDTGV-----LV 514
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
E +E+ + +H + P + VD R C H+ +HLL+A
Sbjct: 515 SEFETIEVIDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDA 571
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRH 715
ALR VL QK V D DFS + + ++ + + VE +N I AN + R+
Sbjct: 572 ALREVLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEEIRKVEHIVNAKIRANIPLKEYRN 630
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ E L + + GE Y D V +I S E C GTHV TG+I +I
Sbjct: 631 IPIEEAKELGAIALF-GEKYGDRVRVIQFGS-----SIEFCGGTHVAATGNIGMVKIISE 684
Query: 776 KSYNHGVRSIKCLTG 790
S GVR I+ TG
Sbjct: 685 SSVAAGVRRIEAYTG 699
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|313205146|ref|YP_004043803.1| alanyl-tRNA synthetase [Paludibacter propionicigenes WB4]
gi|312444462|gb|ADQ80818.1| alanyl-tRNA synthetase [Paludibacter propionicigenes WB4]
Length = 869
Score = 358 bits (920), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 258/814 (31%), Positives = 393/814 (48%), Gaps = 105/814 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR SFLD+F ++GH +V S+P+V D ++ F N+GM QFKN+ LG P Y R
Sbjct: 1 MTSQEIRQSFLDFFA-SKGHKIVPSAPMVIKDDPTLMFTNAGMNQFKNIILGNDPIKYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+LT+ +
Sbjct: 60 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIEWAWEYLTEV-LK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY T F G GL D+E IW + +P I K NFWEMG TGPCG
Sbjct: 119 LDKDRLYVTVFEGYAPEGLERDDEAAAIWAQF-LPEHRIINGNKKDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ A L VN +IEIWN VF+ + R + ++ L IDTG+
Sbjct: 178 SEIHIDIRDNDERAKIDGLTLVNGSHPQVIEIWNNVFMQYNRKADGSLEGLPAKVIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +Q S YDTD+F P++ I +V GA+ YG+ +D + R+++D+
Sbjct: 238 GFERLCMAMQGVQSNYDTDVFTPIIAEIGRVCGAE-YGKD------EKVDIAMRVIADHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++ D P A +R ++R A+ + + K ++ ++E +G Y
Sbjct: 291 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQRHAFMYKLITV-LSENMGKAY 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ K L++ + E+ + + L G+K L
Sbjct: 350 PELLSQ--------------------------KTLIEKVIKEEEESFLRT--LETGIKLL 381
Query: 425 TKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
K +A + + TEI G +AFTLYDT+G ++ + + T+ + F ++ + KER
Sbjct: 382 DKVMADSKAAAKTEIEGKVAFTLYDTFGFPLDLTELILRENNFTVNIDEFNSEMQKQKER 441
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
++ AA+ D + D+ Y F DT +
Sbjct: 442 ARNAAATETGD---------------WVTVREGDSEFVGYDFNEADTEI----------- 475
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
+R+ + ++ ++ + ++ KT YA GGQ+ D G ++G
Sbjct: 476 -----LRYRK-------VKQKNQEYYQIVLSKTPFYAEMGGQVGDCGT-----LKSDHGS 518
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
++I + VH N + VT T+ ++++ R C H+ +HLL+ ALR V
Sbjct: 519 IDIIDTKKENNLAVHIANKLPE-DVTETFTATIDIEKRKATEC--NHSATHLLHEALREV 575
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMRASE 720
L T QK V D DFS + + L+ + + AVE N I N +RR +E
Sbjct: 576 LGTHVEQKGSFVSPDALRFDFSHF-QKLTKEEIRAVEAIANRKIRENYPLQERRETPIAE 634
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+ + + GE Y + V +I S E C GTHV TG+I V+ S
Sbjct: 635 AQAMGAMALF-GEKYGETVRVIQFGS-----SVELCGGTHVSATGNIGLVRVVAESSIAA 688
Query: 781 GVRSIKCLTGDSSKAAVENGKHLSTAASFSQILN 814
G+R I+ +TG + + ++ K T ++LN
Sbjct: 689 GIRRIEAITGKAVEELLD--KQQETIGEAKELLN 720
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFKN+ LG P Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKNIILGNDPIKYSRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E+LT+ + L DRLY T
Sbjct: 92 LGNWSFGDYFKKEAIEWAWEYLTE-VLKLDKDRLYVT 127
>gi|254474615|ref|ZP_05088001.1| alanyl-tRNA synthetase [Ruegeria sp. R11]
gi|214028858|gb|EEB69693.1| alanyl-tRNA synthetase [Ruegeria sp. R11]
Length = 883
Score = 358 bits (920), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 261/826 (31%), Positives = 388/826 (46%), Gaps = 117/826 (14%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FL+YF QGH +V SSP+VP D ++ F NSGM QFKN+F GL Y R SQ
Sbjct: 7 IRSTFLNYFAK-QGHEVVSSSPLVPRNDPTLMFTNSGMVQFKNLFTGLETRDYTRATTSQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K +A A E +TK + +
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAIPFAWELITKE-FGIDKSK 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHY 196
L T + D+E +IW ++GVP D I + NFW+MG TGPCG +EI Y
Sbjct: 125 LLTTVY--------HTDDEAFEIWKKVGVPEDRIIRIDTSDNFWQMGPTGPCGPCTEIFY 176
Query: 197 D-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
D G P SA + D + IEIWN+VF+ +++ ++ L IDTG+G ER
Sbjct: 177 DHGDHIWGGPPGSA----DEDGDRFIEIWNVVFMQNEQFEDGSMKALDMQSIDTGMGLER 232
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
+ +LQ YDTDLF L+E V+ PYG D + +R+++D+ R +
Sbjct: 233 IGALLQGSHDNYDTDLFKALIEASADVTNVDPYG---------DQNVHHRVIADHLRSTS 283
Query: 312 VALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVKELSYNIAEILGDV 363
++D + P + LR ++R A LL ++D ++ L + + +G
Sbjct: 284 FLISDGVMPSNDGRGYVLRRIMRRAMRHAHLLGAKD-------PVMHRLVPALVQQMGAA 336
Query: 364 YPEIQDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ + + I+ +L EE+R L + G+K
Sbjct: 337 YPELGRAQSMIEETLLQEETRFKQTLDR-----------------------------GLK 367
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L +LA + G+ AF LYDTYG ++ Q+ K T+ + F+ + E K +
Sbjct: 368 LLDDELADLDEGAPLPGEAAFKLYDTYGFPLDLTQDALREKGRTVDTDGFDSAMAEQKAK 427
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
++A A + D F V D D+ Y+T + L +V G QV
Sbjct: 428 ARAAWAGSGESAD--STIWFDVADQAGTTDFLGYETEAAEGQVMAL------VVDGAQV- 478
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
+ +GA D V ++ ++T YA +GGQ+ D G + + G
Sbjct: 479 ---------SEAGAGTD---------VQVVLNQTPFYAESGGQVGDSGEIRV-----DGG 515
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
V + + G +HFG V S +T G +++EVD R H+ +HLL+ ALR
Sbjct: 516 VVRVSDTKKAAGVFIHFGKVESGM-ITKGAAAQLEVDHARRSAIRSNHSATHLLHEALRE 574
Query: 662 VL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL Q+ D DFS + + LS+D + VE+ +N I V+ R M +
Sbjct: 575 VLGEHVAQRGSLNADDRLRFDFS-HNKALSLDEIRTVEQQVNHFIRQNSTVETRIMTPDD 633
Query: 721 LPFLTHLTVIPGEIYPDDVILIDI-------SDKENVISREPCCGTHVFNTGHIESCTVI 773
L + GE Y D+V ++ + S E C GTHV TG I + V+
Sbjct: 634 ARALGAQALF-GEKYGDEVRVVSMGKAPTGKGQDGQTWSLELCGGTHVKQTGDIGTFVVL 692
Query: 774 GYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIP 819
G + + GVR I+ LTG + + +L A+ G++P
Sbjct: 693 GDSASSAGVRRIEALTGAEAFQYLTGQDNLLAQAALELKAQPGDVP 738
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 59/88 (67%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFKN+F GL Y R SQKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFTNSGMVQFKNLFTGLETRDYTRATTSQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTK 905
FFEMLGN+SF DY+K +A A E +TK
Sbjct: 89 FFEMLGNFSFGDYFKEEAIPFAWELITK 116
>gi|299148308|ref|ZP_07041370.1| alanine--tRNA ligase [Bacteroides sp. 3_1_23]
gi|298513069|gb|EFI36956.1| alanine--tRNA ligase [Bacteroides sp. 3_1_23]
Length = 872
Score = 358 bits (919), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 264/795 (33%), Positives = 387/795 (48%), Gaps = 113/795 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKEIRDSFKNFF-ESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYQR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVEV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D+E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLSRDDEAASYWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P+L+ I +SG + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGTE-YGKD------KQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +G+
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DNMGE 348
Query: 363 VYPEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
YPE+ Q ++ + + EES ++T L G
Sbjct: 349 AYPELVAQKTLIEKVIKEEEES----------------FLRT--------------LETG 378
Query: 421 VKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
++ L K + + TEISG AFTLYDT+G ++ + + +T+ E F +++ +
Sbjct: 379 IRLLDKTMEDTKANGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNIEEFNEEMQQ 438
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIG 537
K+R++ AA + D + LK T + YDY Y+ + RY
Sbjct: 439 QKQRARNAAA--IETGDWIVLKEG--TTEFVGYDYTEYEASILRYR-------------- 480
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
I+ ++ ++ D T YA +GGQ+ D GV
Sbjct: 481 ---------------------QIKQKNQTLYQIVLDYTPFYAESGGQVGDTGV-----LV 514
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
E +E+ + +H + P + VD R C H+ +HLL+A
Sbjct: 515 SEFETIEVVDTKKENNLPIHITKKLPDHPEAPMMAC---VDTDKRAACAANHSATHLLDA 571
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRH 715
ALR VL QK V D DFS + + ++ + + VE +N I AN + R+
Sbjct: 572 ALREVLGEHIEQKGSLVTPDSLRFDFSHF-QKVTDEEIRKVEHIVNARIRANIPLKEYRN 630
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ E L + + GE Y D V +I S E C GTHV TG+I +I
Sbjct: 631 IPIEEAKELGAIALF-GEKYGDRVRVIQFG-----TSIEFCGGTHVAATGNIGMVKIISE 684
Query: 776 KSYNHGVRSIKCLTG 790
S GVR I+ TG
Sbjct: 685 SSVAAGVRRIEAYTG 699
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYQRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E+L + + L + LY T
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYLVE-VLKLNPEHLYAT 128
>gi|262384031|ref|ZP_06077167.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
gi|262294929|gb|EEY82861.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
Length = 873
Score = 358 bits (919), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 262/799 (32%), Positives = 398/799 (49%), Gaps = 107/799 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF +F + + H +V S+P+V GD ++ F N+GM QFK++ LG P YPR
Sbjct: 2 LTAKEIRESFKQFFASKE-HQIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNVPRKYPR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +RLY T F GS GL D E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPERLYATVFEGSPAEGLDRDNEAAGYW-EQYLPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + A VN D +IEIWN+VF+ R + ++ PL IDTG+
Sbjct: 179 SEIHIDLRSDEERAAVSGADMVNKDHPQVIEIWNLVFMQFNRKADGSLEPLPAKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F P+++ I ++G T+ T + D+ + R+++D+
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPIIKVIAGMAGT-----TYGTDKQQDI--AMRVIADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I A+ D P A +R ++R A+ K+ + K L I E +GD Y
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLDRKEAFMYKLLPVLI-ETMGDAY 350
Query: 365 PEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
PE+ Q ++ + + EES ++T L G++
Sbjct: 351 PELIAQKTLIEKVIKEEEES----------------FLRT--------------LETGIR 380
Query: 423 YLTKQLARDPSI--TEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K++ + T ++G AFTLYDTYG ++ + + + E F + + + K
Sbjct: 381 LLDKKMEETKAAGKTVLNGVDAFTLYDTYGFPLDLTELILRENGMEADIEEFNKAMQKQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
ER++ AA + D + LK + + K+ +G +
Sbjct: 441 ERARNAAA--IETGDWITLK-----EGECKF------------------------VGYDL 469
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
F + +R+ + I+ ++ ++ D+T YA GGQ+ D G +L ++
Sbjct: 470 FECEAEILRYRQ-------IKQKNKVLYQIVLDQTPFYAEMGGQVGDTG--WL---IADD 517
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
K+++ + VH + VT T+++ V R++ C H+ +HLL+ ALR
Sbjct: 518 EKIDVIDTKRENNLPVHLVAKLPK-DVTATFTAKINVKKRIQCEC--NHSATHLLHEALR 574
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMRA 718
VL T QK V D DFS + + ++ + + VE + + I AN + R+M
Sbjct: 575 EVLGTHVEQKGSYVSPDSLRFDFSHF-QKVTDEEIRKVEILVGEKIRANFPLEEHRNMPI 633
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+E L + + GE Y D+V ++ S E C GTH+ TG I S VIG S
Sbjct: 634 AEAKALGAMALF-GEKYGDEVRVVKYGS-----SVELCGGTHIPATGMIGSLHVIGESSI 687
Query: 779 NHGVRSIKCLTGDSSKAAV 797
GVR I+ +T + ++ V
Sbjct: 688 AAGVRRIEAVTAEGAEQFV 706
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++ LG P YPRVA+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 32 GDPTLMFTNAGMNQFKDIILGNVPRKYPRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 91
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K++A A E+L + + L +RLY T
Sbjct: 92 MLGNWSFGDYFKKEAINWAWEYLVE-VLKLNPERLYAT 128
>gi|160886801|ref|ZP_02067804.1| hypothetical protein BACOVA_04814 [Bacteroides ovatus ATCC 8483]
gi|423292552|ref|ZP_17271130.1| alanyl-tRNA synthetase [Bacteroides ovatus CL02T12C04]
gi|156107212|gb|EDO08957.1| alanine--tRNA ligase [Bacteroides ovatus ATCC 8483]
gi|392661633|gb|EIY55213.1| alanyl-tRNA synthetase [Bacteroides ovatus CL02T12C04]
Length = 872
Score = 358 bits (919), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 264/795 (33%), Positives = 387/795 (48%), Gaps = 113/795 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKEIRDSFKNFF-ESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYQR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVEV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D+E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLSRDDEAASYWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P+L+ I +SG + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGTE-YGKD------KQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +G+
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DNMGE 348
Query: 363 VYPEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
YPE+ Q ++ + + EES ++T L G
Sbjct: 349 AYPELVAQKTLIEKVIKEEEES----------------FLRT--------------LETG 378
Query: 421 VKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
++ L K + + TEISG AFTLYDT+G ++ + + +T+ E F +++ +
Sbjct: 379 IRLLDKTMEDTKANGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNIEEFNEEMQQ 438
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIG 537
K+R++ AA + D + LK T + YDY Y+ + RY
Sbjct: 439 QKQRARNAAA--IETGDWIVLKEG--TTEFVGYDYTEYEASILRYR-------------- 480
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
I+ ++ ++ D T YA +GGQ+ D GV
Sbjct: 481 ---------------------QIKQKNQTLYQIVLDYTPFYAESGGQVGDTGV-----LV 514
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
E +E+ + +H + P + VD R C H+ +HLL+A
Sbjct: 515 SEFETIEVVDTKKENNLPIHITKKLPDHPEAPMMAC---VDTDKRAACAANHSATHLLDA 571
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRH 715
ALR VL QK V D DFS + + ++ + + VE +N I AN + R+
Sbjct: 572 ALREVLGEHIEQKGSLVTPDSLRFDFSHF-QKVTDEEIRKVEHIVNARIRANIPLKEYRN 630
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ E L + + GE Y D V +I S E C GTHV TG+I +I
Sbjct: 631 IPIEEAKELGAIALF-GEKYGDRVRVIQFG-----TSIEFCGGTHVAATGNIGMVKIISE 684
Query: 776 KSYNHGVRSIKCLTG 790
S GVR I+ TG
Sbjct: 685 SSVAAGVRRIEAYTG 699
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYQRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E+L + + L + LY T
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYLVE-VLKLNPEHLYAT 128
>gi|423317086|ref|ZP_17294991.1| alanine-tRNA ligase [Bergeyella zoohelcum ATCC 43767]
gi|405581909|gb|EKB55917.1| alanine-tRNA ligase [Bergeyella zoohelcum ATCC 43767]
Length = 865
Score = 358 bits (919), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 246/798 (30%), Positives = 373/798 (46%), Gaps = 111/798 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FLD+F ++GH +V S+PIV D ++ F NSGM QFK+ FLG R
Sbjct: 1 MTSQEIRQKFLDFF-KSKGHEIVPSAPIVLKDDPTLMFSNSGMTQFKDFFLGYKQPSSLR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+K++A A E LT
Sbjct: 60 VADTQKCLRVSGKHNDLDDVGRDTYHHTMFEMLGNWSFGDYFKKEAIEWAWELLT-GVYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + +Y T F G L D+E + W + + D I K NFWEMG GPCG
Sbjct: 119 IPKENIYVTIFEGDASENLDRDQEAYNFW-KAHISEDRILNGNKKDNFWEMGEQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E A VN D +IE+WN+VF+ R + ++ L K +DTG+
Sbjct: 178 SEIHIDLRSEEEKAKISGKELVNQDHPQVIEVWNLVFMEFNRKADGSLEKLPKQNVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ K+S YDTD+F PL+E +E++SG K G+ + D + R++ D+
Sbjct: 238 GFERLCMALQGKSSNYDTDVFTPLIEKVEEISGKKYEGKL-----EDEKDIAIRVIVDHI 292
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + A+AD P + + + + F ++ + +L + + +G+ +
Sbjct: 293 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLGQKEPFIYQLVDTLVQQMGEAFA 352
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ + +Q ++ EE F +E+ L+L
Sbjct: 353 ELKKQHHLVQNVIREEENSF-----------------------LRTLEQGLLILDA---- 385
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ + EISG AF LYDTYG ++ + A K TL FE+ L + KERS+A
Sbjct: 386 --MMNNAENKEISGSKAFELYDTYGFPIDLTALILAEKGFTLDEAGFEENLKKQKERSRA 443
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A + D ++ DD +T +G + I +
Sbjct: 444 AAQTKTDDWVVIR------EDD--------------------ETEFIGYDATEGTVRITQ 477
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
+ R S Q L+F+ T Y GGQ+ D G + Y+ +T
Sbjct: 478 Y--RKVESQKEGTQYQ--------LVFNVTPFYPEGGGQVGDKGFLTSASGEMTYILDTK 527
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+EN I+H + L + + + R HT +HLL+
Sbjct: 528 KEN------------NLIIHIAE-----SLPENLNEPFKAEVKGRPLTEANHTATHLLHQ 570
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL T Q+ +V D DFS + + ++ + + AVEK +N+ I Q+ +
Sbjct: 571 ALREVLGTHVEQRGSKVDFDGLRFDFSHF-QKVTDEELQAVEKKVNERILQQIALKEHRS 629
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + + GE Y D V +I+ +D S+E C GTHV NT I +I
Sbjct: 630 ISMKEAMEAGAMALFGEKYGDKVRMIEFAD-----SKELCGGTHVKNTSDIWYFKIISEG 684
Query: 777 SYNHGVRSIKCLTGDSSK 794
+ G+R ++ +T + K
Sbjct: 685 AVASGIRRVEAITREKVK 702
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK+ FLG RVA++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFSNSGMTQFKDFFLGYKQPSSLRVADTQKCLRVSGKHNDLDDVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT +P + +Y T
Sbjct: 92 LGNWSFGDYFKKEAIEWAWELLT-GVYKIPKENIYVT 127
>gi|429742041|ref|ZP_19275688.1| alanine--tRNA ligase [Porphyromonas catoniae F0037]
gi|429157682|gb|EKY00263.1| alanine--tRNA ligase [Porphyromonas catoniae F0037]
Length = 875
Score = 358 bits (919), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 252/794 (31%), Positives = 389/794 (48%), Gaps = 102/794 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ SK IR S+ ++F ++GH +V S+P+V GD S+ F N+GM QFK++ LG YPR
Sbjct: 1 MTSKEIRESYKEFF-RSKGHQIVPSAPMVIKGDPSLMFTNAGMNQFKDIILGNAEIKYPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+LT+ +
Sbjct: 60 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKQEAIDWAWEYLTEV-LK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY T F G+ GL D+E IW + +P++ I NFWEMG GPCG
Sbjct: 119 LPTDRLYVTIFEGAPAEGLGRDDEAASIWGK-HLPQERILNGNKHDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E S L+ VN +IEIWN+VF+ + R + ++ PL K IDTG+
Sbjct: 178 SEIHIDIRSEEERQRVSGLSLVNQGHPQVIEIWNLVFMQYNRKADGSLEPLPKRVIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F P+++TI ++G + YG + D + R+++D+
Sbjct: 238 GFERLCMALQGKTSNYDTDIFTPIIQTIATLTGIE-YGADEKS------DVAMRVIADHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I A+ D P A +R ++R A+ ++ + L I E +GD Y
Sbjct: 291 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGRREAFMYALLPVLI-ETMGDAY 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ + I ++ EE F LR L G++ L
Sbjct: 350 PELEAGRDLIAKVIREEEESF--LRT--------------------------LETGIRLL 381
Query: 425 TKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
KQ+ AR +T + G AF LYDTYG ++ + + + + + F+ + + KER
Sbjct: 382 DKQIDEARAKGVTTLDGHDAFVLYDTYGFPLDLTALILSEHGMNVDEQGFDSAMQQQKER 441
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
++ AA + D + + V V D V C
Sbjct: 442 ARNAAAIDAGD------------------------------WQTVADGSVHFVGYDAVEC 471
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
+R+ ++ ++N + ++ +T YA GGQ+ D G L + T K
Sbjct: 472 -STEILRYR-------EVKQKNNTYYQVVLSQTPFYAEMGGQVGDKGC--LIDATGR--K 519
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
E+ + +H + + L + V + R R+ H+ +HLL+ ALR V
Sbjct: 520 YEVFDTKRENNLAIHLMKQLPE-DLEGTLRAVVSEERRHRIEA--NHSATHLLHEALREV 576
Query: 663 LTCTYQKSCRVFSDEC-ALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR-RHMRASE 720
L ++ SDE DF+ + + + + + VE+ ++ I + + R + E
Sbjct: 577 LGSHVEQKGSFVSDEVLRFDFAHFAK-VEPEELRRVEQLVSARIRADLPLQEFREVPIDE 635
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+ + + GE Y D V +I S E C GTH+ +TG I + ++ S
Sbjct: 636 AREMGAMALF-GEKYGDRVRVIRFGS-----STEFCGGTHICSTGRIGTFRIVSESSVAA 689
Query: 781 GVRSIKCLTGDSSK 794
GVR I+ TG++++
Sbjct: 690 GVRRIEAYTGEAAE 703
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/99 (59%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD S+ F N+GM QFK++ LG YPRVA+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 31 GDPSLMFTNAGMNQFKDIILGNAEIKYPRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 90
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
MLGNWSF DY+K++A A E+LT+ + LP DRLY T
Sbjct: 91 MLGNWSFGDYFKQEAIDWAWEYLTE-VLKLPTDRLYVTI 128
>gi|375254518|ref|YP_005013685.1| alanine--tRNA ligase [Tannerella forsythia ATCC 43037]
gi|363408282|gb|AEW21968.1| alanine--tRNA ligase [Tannerella forsythia ATCC 43037]
Length = 876
Score = 358 bits (918), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 259/796 (32%), Positives = 394/796 (49%), Gaps = 106/796 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SFL +F + + H +V S+P+V GD ++ F N+GM QFK++ LG P YPR
Sbjct: 2 LTAKEIRESFLSFFASKR-HHIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNVPIKYPR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++ A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEIIAWAWEYLVD-CLH 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +RLY T F GS + D E W E +P+DHI + NFWEMG TGPCG
Sbjct: 120 LDPERLYVTIFEGSPSENIDRDNEAAQYW-ERFLPQDHILEGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ E P +AL VN D +IEIWN+VF+ + R + T+ L + IDT
Sbjct: 179 SEIHVDLRPEAERRATPGAAL--VNRDHPLVIEIWNLVFMQYNRKADGTLESLPNHVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P++ I ++ + PYG + D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPIIRAIADMT-STPYG------TDKEKDVAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ ++ + K L I + +G
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLDRREAFMYKLLPALI-DTMGT 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I ++ EE F LR L G++
Sbjct: 349 AYPELIAQQELIGKVIREEENAF--LRT--------------------------LETGIR 380
Query: 423 YLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K++ A+ ++G AF LYDTYG ++ + + ++T+ AF+ ++ + K
Sbjct: 381 MLDKKIEEAKAAGQNMLNGAHAFVLYDTYGFPLDLTELILREHRMTVDTAAFDAEMQKQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
ER++ AA D + V D +T+ VG D
Sbjct: 441 ERARNAAAIETGD--------WIVLRDG-------------------ETDFVGY---DHF 470
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
C D +R+ + ++ ++ ++ DKT YA GGQ+ D G +L E
Sbjct: 471 GC-DAEILRYRK-------VKQKNKELYQIVLDKTPFYAEMGGQVGDCG--WLIAPDGE- 519
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
K EI + VH + + +V+ T+++ + R+R C H+ +HLL+ ALR
Sbjct: 520 -KTEIIDTKRENNLPVHLARKLPN-EVSGTFTAQINKEMRIRCEC--NHSATHLLHEALR 575
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR-RHMRA 718
VL T QK V + DFS + + L+ + + VE+ +N I + + R +
Sbjct: 576 EVLGTHVEQKGSYVSPESLRFDFSHF-QKLTDEEIRKVERVVNRKIREDLPLQEYRDIPI 634
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+E + + + GE Y D+V ++ S E C GTH+ TG I S ++ S
Sbjct: 635 AEAKAMGAMALF-GEKYGDEVRVVRYGS-----SVELCGGTHIPKTGMIGSMYIVNESSI 688
Query: 779 NHGVRSIKCLTGDSSK 794
GVR I+ +T +S++
Sbjct: 689 AAGVRRIEAVTAESAE 704
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++ LG P YPRVA+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 32 GDPTLMFTNAGMNQFKDIILGNVPIKYPRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 91
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
MLGNWSF DY+K++ A E+L + L +RLY T
Sbjct: 92 MLGNWSFGDYFKKEIIAWAWEYLVD-CLHLDPERLYVTI 129
>gi|383451473|ref|YP_005358194.1| Alanine--tRNA ligase [Flavobacterium indicum GPTSA100-9]
gi|380503095|emb|CCG54137.1| Alanine--tRNA ligase [Flavobacterium indicum GPTSA100-9]
Length = 878
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 254/811 (31%), Positives = 388/811 (47%), Gaps = 93/811 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR ++LD+F ++ H +V S+PIV D ++ F NSGM QFK FLG PR
Sbjct: 1 MKSQDIRKAYLDFF-KSKDHLIVPSAPIVLKDDPTLMFNNSGMAQFKEFFLGNGTPKSPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A EFLT+ +
Sbjct: 60 IADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEALAWAWEFLTE-VLK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY + F G+ +P D+E DIW + V D I K NFWEMG GPCG
Sbjct: 119 LDKDRLYVSVFEGNPAENVPFDQEAFDIWKQY-VSEDRIILGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + S VNAD ++EIWN VF+ R + ++ L ++DTG+
Sbjct: 178 SEIHIDLRTDAERNAVSGRELVNADHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFT--TSNRTDLDTSYRMLSD 305
GFERL +QN TS YDTD+F PL+ + ++G K + + ++ + R++ D
Sbjct: 238 GFERLCMAMQNVTSNYDTDVFTPLIAKVSAITGLKYTNNEVKDISEEQNKINIAIRVIVD 297
Query: 306 YSRMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+ R + A+AD P T + + + F + + +L +A +G+
Sbjct: 298 HVRAVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLGTKEPFINQLVEVLANQMGEF 357
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PEI+ + ++ EE F LR LEQ G++
Sbjct: 358 FPEIKSQQQLVTNVIREEEASF--LRT---------------LEQ-----------GLQL 389
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L K +A + S E+SG+ F LYDT+G K++ + K + FE++L + K RS
Sbjct: 390 LDKVVA-ETSGKEVSGEKVFELYDTFGFPKDLTALILKEKGYSFNETEFEKELEKQKARS 448
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+A + VT D +K +D N V I +G
Sbjct: 449 RAAS---------------EVTTDDWKV--------------LIDGN-VEIFVGYDQTEN 478
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
+ R + + D + + ++ D T Y GGQ+ D G N T +
Sbjct: 479 NVKITRIRKVDSKKDGVLFQ------IVLDATPFYPEGGGQVGDKGTLVSANET-----I 527
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
EI + I+HF + V G ++V D +R + H+ +HL++ ALR +L
Sbjct: 528 EIIDTKKENNLILHFAKQLPE-NVEAGFVAKVNTD--LRTSTSKNHSATHLMHLALRSIL 584
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
T QK V + DFS + + ++ + + VE +N I Q+Q+ +
Sbjct: 585 GTHVEQKGSLVNPNYLRFDFSHFSK-VTDEELRQVEARVNQQIEAQLQLQEYRNIPIQEA 643
Query: 723 FLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGV 782
+ GE Y D V +I+ D S+E C G HV NT I +I + G+
Sbjct: 644 LDKGAMALFGEKYGDTVRMIEFGD-----SKELCGGIHVKNTADIWHFKIISEGAVAAGI 698
Query: 783 RSIKCLTGDSSKAAVENGKHLSTAASFSQIL 813
R I+ +TGD+ KA +N ++ T A ++L
Sbjct: 699 RRIEAITGDAVKAFYKNQEN--TLAEIKEVL 727
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK FLG PR+A++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFNNSGMAQFKEFFLGNGTPKSPRIADTQKCLRVSGKHNDLEDVGFDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A EFLT+ + L DRLY +
Sbjct: 92 LGNWSFGDYFKKEALAWAWEFLTE-VLKLDKDRLYVS 127
>gi|423216877|ref|ZP_17203373.1| alanyl-tRNA synthetase [Bacteroides caccae CL03T12C61]
gi|392629407|gb|EIY23414.1| alanyl-tRNA synthetase [Bacteroides caccae CL03T12C61]
Length = 872
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 264/793 (33%), Positives = 384/793 (48%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKEIRDSFKNFF-ESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYQR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D+E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLSRDDEAASYWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P+L+ I +SG + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPMLKAIAVMSGTE-YGKD------KQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +GD
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DNMGD 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ ++ EE F LR L G++
Sbjct: 349 AYPELIAQKTLIEKVIKEEEEAF--LRT--------------------------LETGIR 380
Query: 423 YLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K + + TEISG AFTLYDT+G ++ + + +T+ E F ++ + K
Sbjct: 381 LLDKTMEDTKAAGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNLEEFNAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA + D + LK T + YDY Y+ + RY
Sbjct: 441 QRARNAAA--IETGDWITLKEG--TTEFVGYDYTEYEASILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
I+ ++ ++ D T YA +GGQ+ D GV E
Sbjct: 481 -------------------QIKQKNQTLYQIVLDYTPFYAESGGQVGDTGV-----LVSE 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + P + V+ R C H+ +HLL+AAL
Sbjct: 517 FETIEVIDTKKENNLPIHITKKLPEHPEAPFMAC---VNTDKRAACAANHSATHLLDAAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHIEQKGSLVTPDSLRFDFSHF-QKVTDEEIRQVEHIVNARIRANIPLKEYRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y D V +I S E C GTHV TG+I ++ S
Sbjct: 633 IEEAKELGAIALF-GEKYGDRVRVIQFGS-----SIEFCGGTHVAATGNIGMVKIVSESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYQRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E+L + + L + LY T
Sbjct: 93 LGNWSFGDYFKKEAINWAWEYLVE-VLKLNPEHLYAT 128
>gi|324504252|gb|ADY41836.1| Alanyl-tRNA synthetase [Ascaris suum]
Length = 835
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 270/816 (33%), Positives = 412/816 (50%), Gaps = 79/816 (9%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPA---- 67
+ S +R SFL +F + +GH V SS IVP D S+ FV +GM QFK++ LG+ A
Sbjct: 19 MSSSEVRQSFLKFFMD-RGHVHVPSSSIVPSDDPSLLFVTAGMNQFKSIILGVCGADDWR 77
Query: 68 -PYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
RV NSQKC+R GGKHNDL+ G D HHTFFEMLGNWSF DY+K +AC+ A E+LT
Sbjct: 78 SSLRRVVNSQKCLRAGGKHNDLNDVGGDLSHHTFFEMLGNWSFGDYFKAEACQFAWEYLT 137
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ + LP DRLY TY+G + L D E R+IW LG+ I + G++ NFW M TG
Sbjct: 138 EV-LRLPPDRLYVTYYGDDHELSLGDDIECREIWRNLGLHPSRILRFGVEENFWVMADTG 196
Query: 187 PCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
PCG SEIHYD + G +S L VN ++EIWN+VF+ + R ++ IV L +ID
Sbjct: 197 PCGPCSEIHYDFIGGRDASHL--VNTSDPSVVEIWNLVFMQYNRDASGRIVSLPCRHIDC 254
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFER I+Q S YD+D+F PL+ I K + YG ++ DT+YR ++D
Sbjct: 255 GMGFERTAAIMQQVQSNYDSDIFSPLISEISKYTSLGGYGGRIGQADIYGRDTAYRTIAD 314
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R + VA++D + PDA + LR ++R A +S + +G L+ L L
Sbjct: 315 HLRALCVAISDGVRPDAAGRGYVLRRMLRRAARMSSVTLQADRG-LLAALVPTYTSHLAR 373
Query: 363 VYPEIQDSINKIQLILG-EESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
+PE+ ++ I+ I+ EES+ + V + L + E
Sbjct: 374 SFPEVANNAKVIEDIISLEESQFW-----RVVDRGERLFAEEAE---------------- 412
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
K L K++ SGD+A+ L++T+G + LA + L++ + FE+ N+ K
Sbjct: 413 KSLLKKIP-------FSGDIAWYLHNTHGFPIELTSMLAEERNLSIDLDRFEECRNQAKM 465
Query: 482 RSKAKAASNV-PDIDLMDLKHFPVTD--DKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
+ +A ++D + L +T D KY+Y + Y FP ++ I
Sbjct: 466 LRRVRANDTCWRNVDTVRLCQDGMTRTCDMGKYEY-AKMDDGSYVFPERQAKILAI---- 520
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
K IR QL N ++ D+T YA GGQ+ D GV L ++
Sbjct: 521 ----FSKEGIRLE---------QLATNMEGCVVVDETIFYAEQGGQLADNGV--LCSSNG 565
Query: 599 ENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
E V + ++ + + G+ V + +++++ R++L MRAHT +HLL A
Sbjct: 566 EEVFV-VDDVQKKDDFVFLIGHSTQDLTVETNVIQKIDLNRRLQL--MRAHTGTHLLLDA 622
Query: 659 LRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
LR + YQ+ V D D S+ LS + VE+ +++VI + V +
Sbjct: 623 LRILFGPAVYQRGSLVSPDRIRFDCSLE-HALSQGQIREVERVLSEVIESDQPVFTEIVP 681
Query: 718 ASELPFLTH----LTVIPGEIYPDDVI-LIDISDKENVISR---EPCCGTHVFNTGHIES 769
++L + + +T E + +I ++ I+ N S E CCGTHV NT + +
Sbjct: 682 HTQLSAIQNIQSTITASLTETASNGLIRVVTINAPVNGKSARAVECCCGTHVLNTRDLGA 741
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLST 805
V+ +S GVR + LTG +++ A+E G L T
Sbjct: 742 FVVVSDRSLGSGVRRLTALTGTAARLAIEKGMELRT 777
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPA-----PYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D S+ FV +GM QFK++ LG+ A RV NSQKC+R GGKHNDL+ G D
Sbjct: 46 VPSDDPSLLFVTAGMNQFKSIILGVCGADDWRSSLRRVVNSQKCLRAGGKHNDLNDVGGD 105
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNWSF DY+K +AC+ A E+LT+ + LP DRLY T+
Sbjct: 106 LSHHTFFEMLGNWSFGDYFKAEACQFAWEYLTE-VLRLPPDRLYVTY 151
>gi|452944690|ref|YP_007500855.1| alanyl-tRNA synthetase [Hydrogenobaculum sp. HO]
gi|452883108|gb|AGG15812.1| alanyl-tRNA synthetase [Hydrogenobaculum sp. HO]
Length = 856
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 259/796 (32%), Positives = 395/796 (49%), Gaps = 125/796 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F N +GHT+VKS+ IVP D ++ FVN+GM FKNVFLGL PY R
Sbjct: 1 MKTDEIREKFLSFFEN-KGHTVVKSASIVPKSDPTLLFVNAGMVPFKNVFLGLESLPYKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ QKC RV GKHNDL GR + HHTFFEMLGN+SF DY+K++A A EF+T+ +
Sbjct: 60 ATSCQKCFRVSGKHNDLESVGRTTRHHTFFEMLGNFSFGDYFKKEAILYAWEFVTE-VLR 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP D++Y + D+E DIW ++ VP D I + G + NFW+MG TGPCGY
Sbjct: 119 LPKDKIYVSVH--------QNDQEAYDIWKDMVKVPEDKIWRMGDEDNFWQMGETGPCGY 170
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SSEI+ D +GE S R +EIWN+VF+ + + + PL+K IDTG+G E
Sbjct: 171 SSEIYID-RGEKYSQDER-------YLEIWNLVFMQFNKDESGHMEPLAKPSIDTGMGLE 222
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +++Q K S ++ D+ +P++ +E +S + + T TD+ + R+++D+SR
Sbjct: 223 RIASVMQGKDSNFEIDIIMPIIHFVEDLSSKR-----YKTDEETDI--AMRVIADHSRAC 275
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
TVA+++ + P + +R V+R A+ + +K+ L K + + + L + YPE+
Sbjct: 276 TVAISEGIIPSNEGRGYVIRKVLRRAVRFGYKI-GIKEEFLYKSVDV-VVDTLKNAYPEL 333
Query: 368 QDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ S ++ +I EESR + L Q LE F+ +
Sbjct: 334 EMSKEFVKNIIKAEESRFLETL--------------QNSLELFD---------------R 364
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
+A + S ISGD F YDTYG +I+QE+A K +TL + F + L + KE S+
Sbjct: 365 YIAENKS-NVISGDFIFKAYDTYGFPLDILQEMAHEKGMTLDMKGFYELLEKQKEESR-- 421
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
KHF +++K Y + R F G ++
Sbjct: 422 -------------KHFK-SEEKVDEVYLSIKDKARSIF-------TGYTHTEE----QAK 456
Query: 547 AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV------AYLTNTTQEN 600
A+ + G + ++ + + + I DKT Y GGQI D G+ ++ N T+
Sbjct: 457 ALFIIKDGKITEELKEQEDGII--ILDKTPFYPEKGGQIGDSGILENSEALFIVNDTK-- 512
Query: 601 GKVEIGELASLEGKIVHFGNVVSS-FKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+G I H G ++ +V G+ ++ +D R R HT++HLL+AAL
Sbjct: 513 --------TPTDGVIAHIGKLIKGRLRVGAGVLAK--IDKERREDIKRHHTSTHLLHAAL 562
Query: 660 RRVLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R + + +++ DE DF+ Y +L + + A+E IN+ I +V
Sbjct: 563 RNMFGESVRQAGSYVGDEFLRFDFTFY-RSLKPEELEALEAMINEEIMKNEEV-----FV 616
Query: 719 SELPFL----THLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
ELP+ T I E Y D V +I D S+E C GTHV TG I +I
Sbjct: 617 KELPYQEAIKTGAIAIFEEKYGDVVRVISAGD----FSKELCGGTHVKRTGDIGYFKIIS 672
Query: 775 YKSYNHGVRSIKCLTG 790
S G+R I G
Sbjct: 673 ESSVGAGIRRIIAKAG 688
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ FVN+GM FKNVFLGL PY R + QKC RV GKHNDL GR + HHT
Sbjct: 28 VPKSDPTLLFVNAGMVPFKNVFLGLESLPYKRATSCQKCFRVSGKHNDLESVGRTTRHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K++A A EF+T+ + LP D++Y +
Sbjct: 88 FFEMLGNFSFGDYFKKEAILYAWEFVTE-VLRLPKDKIYVS 127
>gi|372222183|ref|ZP_09500604.1| alanyl-tRNA synthetase [Mesoflavibacter zeaxanthinifaciens S86]
Length = 871
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 256/805 (31%), Positives = 377/805 (46%), Gaps = 122/805 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ +R FL++F N + H +V S+P+V D ++ F N+GM QFK FLG T + R
Sbjct: 1 MTSQKVREQFLNFFKNKE-HKIVPSAPMVMKNDPTLLFTNAGMNQFKEYFLGNTKPTFKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+++QKC+RV GKHNDL G+D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 ASDTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKKEAIAWAWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGS-DQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+ D LY T F GS D+ L D+E D W + VP + I K NFWEMG GPCG
Sbjct: 119 IDKDCLYVTVFEGSEDEDQLAMDKEAYDFWKAI-VPEERILMGNKKDNFWEMGDQGPCGP 177
Query: 191 SSEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH D++ A VN D ++EIWN+VFI + R + + L + +IDTG
Sbjct: 178 CSEIHVDIRSAEEKAKTPGAELVNMDHPQVVEIWNLVFIQYNRKANGLLENLPEKHIDTG 237
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERL +LQ S YDTD+F PL+ IE ++ +K YG+ T D + R+++D+
Sbjct: 238 MGFERLCMVLQGVQSNYDTDVFTPLIREIEAITESK-YGKNEET------DIAIRVIADH 290
Query: 307 SRMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R + A+AD P T + + + F + + L +A +G+ +
Sbjct: 291 VRAVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLDTKEPFIYRLVNTLASQMGEAF 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+++ I+ ++ EE F LEQ GLV L
Sbjct: 351 PELKNQQQLIENVIKEEENSF-----------------LATLEQ-------GLV-----L 381
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ + ++ GD AF LYDT+G ++ + K L E FEQ L K RS
Sbjct: 382 LDSVMKSAKDKKVDGDKAFELYDTFGFPIDLTALILEEKGFALDTEGFEQALQAQKARS- 440
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
+AAS + D L+ DT + + L+ QV +
Sbjct: 441 -RAASEISKGDWTVLEQ--------------DTEQEFIGYDTLEA---------QVKVVK 476
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNT 596
+ + G D Q L+F+ T YA GGQ+ D G V Y+ +T
Sbjct: 477 YRKVTTKKEG---DRYQ--------LVFNLTPFYAEGGGQVGDKGYLEAANGDVTYILDT 525
Query: 597 TQENGKVEIGELASLEGKIVHF-----GNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTT 651
+EN +IVHF ++ +FK VD + R HT
Sbjct: 526 KKEN------------NEIVHFAENLPADLAGTFKAV--------VDKKQRQRTASNHTA 565
Query: 652 SHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ 710
+HLL+ ALR +L + QK V S DFS + + ++ + + AVE+++N IA Q+
Sbjct: 566 THLLHQALREILGSHVEQKGSAVHSKHLRFDFSHFAK-VTPEELEAVEQFVNARIAGQIP 624
Query: 711 VDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESC 770
++ + + GE Y D V I + S E C GTHV NT I
Sbjct: 625 LEENRNVPVKQALEAGAMALFGEKYGDTVRTIKFGN-----SIELCGGTHVQNTSEIWHF 679
Query: 771 TVIGYKSYNHGVRSIKCLTGDSSKA 795
+ + G+R I+ +T D+ KA
Sbjct: 680 KITSEGAVAAGIRRIEAITSDAVKA 704
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 61/84 (72%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG T + R +++QKC+RV GKHNDL G+D+YHHT FEM
Sbjct: 32 DPTLLFTNAGMNQFKEYFLGNTKPTFKRASDTQKCLRVSGKHNDLEEVGKDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTK 905
LGNWSF DY+K++A A E LT+
Sbjct: 92 LGNWSFGDYFKKEAIAWAWELLTE 115
>gi|320161086|ref|YP_004174310.1| alanyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
gi|319994939|dbj|BAJ63710.1| alanyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
Length = 911
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 265/806 (32%), Positives = 389/806 (48%), Gaps = 93/806 (11%)
Query: 16 SIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANS 75
IR +F+D+F +GHT V SS +VP GD ++ F N+GM QFK+VFLG PY R NS
Sbjct: 8 EIRQTFIDFFVQ-RGHTFVPSSSLVPGGDQTLLFTNAGMVQFKDVFLGTDHRPYSRAVNS 66
Query: 76 QKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLD 135
QKC+RV GKHNDL GRD HHTFFEMLGNWSF DYYK++A A E LT+ L
Sbjct: 67 QKCMRVAGKHNDLDDVGRDDTHHTFFEMLGNWSFGDYYKKEAIAWAWELLTQ-VYQLDPA 125
Query: 136 RLYFTYFGGSDQYG-LPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSE 193
RLY T F D+ G +P DEE ++W + +H+ G K NFWEM TGPCG SE
Sbjct: 126 RLYATCF--KDEKGDIPTDEEAAEVWRSQPNFNPEHVLFFGRKDNFWEMADTGPCGPCSE 183
Query: 194 IHYDM-------KGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
IH D KG P + RVN D +EIWN+VFI + R+S + PL + ++DTG
Sbjct: 184 IHIDRGPEACDKKGVPGH-VCRVNGDCKRFLEIWNLVFIQYNRLSPTELEPLPQRHVDTG 242
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV++LQ +S Y TDL PLL+ ++++G T + R T YR+++D+
Sbjct: 243 MGFERLVSLLQGVSSNYRTDLLWPLLQKTQELTG-------HTDAEREANITPYRVIADH 295
Query: 307 SRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL----GD 362
+R T +AD + P T RN V ++ F K G L + +AE++ GD
Sbjct: 296 ARAATFLIADGVVPGNTG--RNYVCRMIIRRAARFGGKIG-LKEPFLAKVAEVVIQNYGD 352
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ + I + E F ++ +KE Q L+ G+K
Sbjct: 353 FYPELVRNRTAILDGITREEERFQRTLESGMKE------LQESLD------------GLK 394
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+++ + G AF LY T+GL + +++A + L + + F + E +
Sbjct: 395 GKGEKI--------LDGKKAFDLYATHGLPLELTRDIAQEQGLDVDQQGFRDAMEEHRLA 446
Query: 483 SKAKAASNV---PDIDLMD--LKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
S A A D+DL L+ K Y+ Y + ++ L+ +
Sbjct: 447 SGAGKAFGPLGGEDVDLYRPALESLQAEGKLGKAGVEYNP----YEWLEVEGELLALF-- 500
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
R G + S+ V ++ +T Y AGGQ+ D G + +
Sbjct: 501 --------------REGQRVSSVSAGDQ--VEVLLPRTGFYVEAGGQVSDAGT--IVSVN 542
Query: 598 QENGKVEIGELAS-LEGKIVHFGNVVSSFKVTPGLTSRV--EVDARMRLGCMRAHTTSHL 654
+ ++ + E+ G IVH G VV TP + V VD + R MR HT +HL
Sbjct: 543 EPRWEIRVTEMRKPAAGVIVHVGEVVRG---TPTVGDWVIARVDTQRRRDIMRNHTATHL 599
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
L+A L+ VL Q V D DF+ + E L+ + + +E +N I + +
Sbjct: 600 LHAELQEVLGEHARQAGSLVAPDRLRFDFT-HPEPLTPEQLERIEAGVNRAILENIPLQT 658
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
R ++ + + GE Y + V + I + + +S E C GTHV TG I ++
Sbjct: 659 R-VKPLQEAIAEGAMALFGEKYGEVVRTVMIGETDP-LSYELCGGTHVHETGDIGLFLIV 716
Query: 774 GYKSYNHGVRSIKCLTGDSSKAAVEN 799
S GVR I+ +TG + V+
Sbjct: 717 SEGSAAAGVRRIEAVTGRGAYELVQK 742
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P GD ++ F N+GM QFK+VFLG PY R NSQKC+RV GKHNDL GRD HHT
Sbjct: 31 VPGGDQTLLFTNAGMVQFKDVFLGTDHRPYSRAVNSQKCMRVAGKHNDLDDVGRDDTHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK++A A E LT+ L RLY T
Sbjct: 91 FFEMLGNWSFGDYYKKEAIAWAWELLTQ-VYQLDPARLYAT 130
>gi|262195176|ref|YP_003266385.1| alanyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
gi|262078523|gb|ACY14492.1| alanyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
Length = 890
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 263/797 (32%), Positives = 378/797 (47%), Gaps = 101/797 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + +RSSFLD+F +GH V S+ +VP GD ++ F N+GM FK+VF G PR
Sbjct: 1 MKAAQVRSSFLDFFA-ARGHERVHSASLVPVGDPTLLFTNAGMVPFKDVFTGHQTRAIPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQKCVR GGKHNDL G+ + HHTFFEMLGN+SF DY+K+DA A E LT+
Sbjct: 60 ATSSQKCVRAGGKHNDLDQVGKTARHHTFFEMLGNFSFGDYFKKDAIAWAWELLTE-VYG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+ +RL T F G + G+ D+E R IW E+ G+P + I G NFW MG TGP G
Sbjct: 119 IDKERLVITVFAGDSELGVGADDEARAIWGEVTGMPSERIIGLGKSENFWMMGETGPMGP 178
Query: 191 SSEIHYDMKGEPSSALARVNADR---NDLIEIWNIVFISH-KRVSADTIVPLSKNYIDTG 246
SEIHY G+P AL + D + +EIWN+VF+ + +R + L IDTG
Sbjct: 179 CSEIHYFGAGKP-DALPGTDPDAPVWSGWLEIWNLVFMQYERREPGGALHKLPAPSIDTG 237
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
G ER+ ++LQ +S YDTDLF PLL + ++ G K YG D DTS R+++D+
Sbjct: 238 AGLERVTSVLQGVSSNYDTDLFQPLLHSAAELCG-KRYGED------GDADTSMRVIADH 290
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV-------KELSYNI 356
+R +AD +FPD T K LR + R A V+ GKL+ + +
Sbjct: 291 ARATAFLVADGVFPDKTDKEYVLRRIFRRA---------VRHGKLLGIEEPFMHRMCARV 341
Query: 357 AEILGDVYPEIQDSINKI-QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
E + D YPE+ + I ++ L EE R L + N++EE
Sbjct: 342 VEEMKDAYPELAERATVIHEITLEEEKRFRATLDRG-----------------LNLLEE- 383
Query: 416 GLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQK 475
++ Q A+ + +SGD F LYDTYG ++ + +A + HE F ++
Sbjct: 384 ------EFGRMQAAKSST---VSGDKVFQLYDTYGFPSDLTEIIADEHGYGIDHEGFREE 434
Query: 476 LNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
L + +ERSKA ++ V + ++ K T+ Y L + G V
Sbjct: 435 LEQARERSKAAHSTGVGEGEVF----------KTLAGELGATSFLGYEGEGLSGS--GQV 482
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
+ +D + A +GA V D+T YA +GGQI D G A
Sbjct: 483 M---ALVVDGERVERAEAGAQ-----------VAFACDQTPFYAESGGQIGDCGEAR--- 525
Query: 596 TTQENGKVEIGELASLEG-KIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
++ +V I + G VH G V+ + G EVD R H+ +HL
Sbjct: 526 -SEAGARVRIDDTRKPSGDTFVHIGEVLEG-AIALGDQLGFEVDGERRARIRANHSATHL 583
Query: 655 LNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
L+ AL++ L QK V D DF+ + +S + VE ++N I
Sbjct: 584 LHLALKKTLGDHVAQKGSSVGPDRLRFDFAHF-SPMSDEQTQQVEDWVNAEIRKNRDSVT 642
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
M SE + + GE Y D V ++ I + S E C GTHV G I ++
Sbjct: 643 DVMSLSEAKERGAVAMF-GEKYGDKVRVVGIGSE----SLEFCGGTHVHRAGDIGLFKIV 697
Query: 774 GYKSYNHGVRSIKCLTG 790
S GVR I+ +TG
Sbjct: 698 SESSVAQGVRRIEAVTG 714
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 61/88 (69%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P GD ++ F N+GM FK+VF G PR +SQKC+R GGKHNDL G+ + HHT
Sbjct: 28 VPVGDPTLLFTNAGMVPFKDVFTGHQTRAIPRATSSQKCVRAGGKHNDLDQVGKTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTK 905
FFEMLGN+SF DY+K+DA A E LT+
Sbjct: 88 FFEMLGNFSFGDYFKKDAIAWAWELLTE 115
>gi|373489223|ref|ZP_09579886.1| alanyl-tRNA synthetase [Holophaga foetida DSM 6591]
gi|372004699|gb|EHP05338.1| alanyl-tRNA synthetase [Holophaga foetida DSM 6591]
Length = 875
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 266/849 (31%), Positives = 401/849 (47%), Gaps = 116/849 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIV-PYGDDSIAFVNSGMCQFKNVFLGLTPAPYP 70
+ + +R FLDYF QGH LV SS ++ P D ++ + N+GM QFK+VF+G Y
Sbjct: 1 MKTSELRKRFLDYFA-AQGHRLVSSSAVIGPADDPTVMWTNAGMVQFKDVFVGKERRDYT 59
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP- 129
R A SQKC+R GGKHNDL G + HHTFFEMLGN+SF DY+K DA R A EF+T P
Sbjct: 60 RAATSQKCLRAGGKHNDLDNVGFTARHHTFFEMLGNFSFGDYFKADAIRYAWEFITGPAS 119
Query: 130 ---VSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ L RL+ T F G++ G+P D E +W++ GVP D I + G K NFW+MG TG
Sbjct: 120 QGNLGLDRSRLWVTVFEGAE--GIPADTEAEQLWIQAGVPADRILRFGKKDNFWQMGDTG 177
Query: 187 PCGYSSEIHY----DMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
PCG SEIHY D+ G VN D +D +EIWN+VF+ +++ + PL K
Sbjct: 178 PCGPCSEIHYYRPKDVSGNRPEL---VNGDGDDTMEIWNLVFMQYEQDGKGGLKPLPKPS 234
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRM 302
IDTG+G ER+ +ILQ S Y+ DLF P+ E I KV+ KP R T NRT + ++
Sbjct: 235 IDTGMGLERVASILQGVESNYEIDLFAPIFEAIWKVARIKPEERREHT-NRT----ASQV 289
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI 359
++D+ R T + D + P + LR + R AL + + +G +L + +
Sbjct: 290 IADHIRAATFMIYDGVVPSNEGRGYVLRKITRRALRFGKKLGI--EGLFFADLVPAVLQA 347
Query: 360 LGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
+GD YPE+ + +IQ +L E QF++ GL
Sbjct: 348 MGDAYPELGSELPRIQKVLAREE------------------------AQFSVTLNAGL-- 381
Query: 420 GVKYLTKQL-ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
+QL A D S + G F LYDT+G +++++ + L E F+ +L E
Sbjct: 382 ------RQLEACDISSGALCGTDIFKLYDTFGFPVDLVEDWCRERGLKADLEGFQTELAE 435
Query: 479 LKERSKAKAASNVPDI----DLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+++K++AA D+ D L P T Y T + T L
Sbjct: 436 --QKAKSRAAMKAHDVRIQGDYAVLADLPATQ-----FVGYQTLEAQATVLAL------- 481
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
F ++ ++ S+ + D T YAT+GGQ D G
Sbjct: 482 ------FDLNHKRVKELTGEGSV-------------LLDTTPFYATSGGQTGDTGTLSF- 521
Query: 595 NTTQENGKVEIGE-LASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA-HTTS 652
E G ++ E A + +H N K + ++V + R R+ RA HT +
Sbjct: 522 ----ETGSAKVLETTAPAPKRSLHRVNCSGRLKEGDAVLAQVNEERRARI---RAHHTAT 574
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL+AALR VL T Q V +D DF+ + L +E+ +++ +
Sbjct: 575 HLLHAALREVLGTHVKQAGSVVDADRLRFDFNHFA-PLEPAQTLEIERMVSEQTLRAIPT 633
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
+ M + L + + GE Y ++V ++ + S+E C GTHV NTG I
Sbjct: 634 KSQSMPIEDALALGAMALF-GEKYGEEVRVVSVPG----FSQELCGGTHVANTGEIGCVK 688
Query: 772 VIGYKSYNHGVRSIKCLTGDSSKAAVENGK----HLSTAASFSQILNVGNIPYGDDSIAF 827
++ + GVR I+ + G ++ ++ + HLS A+ + +P D IA
Sbjct: 689 IVSEGAVAAGVRRIEAVAGMAALERLQEDEALIHHLSRQANAGRENLESLLPAKDARIAA 748
Query: 828 VNSGMCQFK 836
+ + + K
Sbjct: 749 LEKELKEAK 757
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTF 878
P D ++ + N+GM QFK+VF+G Y R A SQKC+R GGKHNDL G + HHTF
Sbjct: 30 PADDPTVMWTNAGMVQFKDVFVGKERRDYTRAATSQKCLRAGGKHNDLDNVGFTARHHTF 89
Query: 879 FEMLGNWSFNDYYKRDACRMALEFLTKPPV--SLPLDR 914
FEMLGN+SF DY+K DA R A EF+T P +L LDR
Sbjct: 90 FEMLGNFSFGDYFKADAIRYAWEFITGPASQGNLGLDR 127
>gi|84686864|ref|ZP_01014748.1| alanyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
gi|84665061|gb|EAQ11541.1| alanyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
Length = 882
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 254/803 (31%), Positives = 382/803 (47%), Gaps = 124/803 (15%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FL YF GHT+V SSP+VP D ++ F NSGM QFKN+F G+ Y R SQ
Sbjct: 7 IRSTFLSYF-EKNGHTVVDSSPLVPRNDPTLMFTNSGMVQFKNLFTGVEHRDYTRATTSQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K++A A E +T+ +P D+
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKEAIPFAWELITR-EFGIPKDK 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHY 196
LY T + D+E +IW ++GVP + I + NFW+MG TGPCG +EI Y
Sbjct: 125 LYTTVY--------HTDDEAFEIWKKVGVPEERIIRIATSDNFWQMGPTGPCGPCTEIFY 176
Query: 197 D-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
D G P S D + IEIWN+VF+ +++ ++ L IDTG+G ER
Sbjct: 177 DHGDHIWGGPPGSP----EEDGDRFIEIWNVVFMQNEQFEDGSMRELDMQSIDTGMGLER 232
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
+ +LQ YDTDLF L+E +G PYG D + +R+++D+ R +
Sbjct: 233 IGALLQGSHDNYDTDLFKALIEASAHATGVDPYG---------DHNVHHRVIADHLRSTS 283
Query: 312 VALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+AD + P + LR ++R A LL ++D +LV EL +G
Sbjct: 284 FLMADGVMPSNEGRGYVLRRIMRRAMRHAHLLGAKDPV---MHRLVPELVRQ----MGQA 336
Query: 364 YPEIQDSINKI-QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ + + I + +L EE+R L + G+K
Sbjct: 337 YPELGQAQSMIEETLLTEETRFQATLDR-----------------------------GLK 367
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L ++LA+ P + G+ AF LYDT+G ++ Q+ K + E F+ + E K +
Sbjct: 368 LLDEELAKLPEGAALPGEAAFKLYDTFGFPLDLTQDALREKDRLVDTEGFDAAMAEQKAK 427
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
++A + + D + + ++K ++ YDT L + GD+
Sbjct: 428 ARAAWSGSGEAADAT--VWYDIAEEKGTTEFLGYDTEKAEGQIVAL------VADGDKTD 479
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
+D +++ ++ ++T YA AGGQ+ D G T E G
Sbjct: 480 KVDTGSVQ--------------------IVVNQTPFYAEAGGQVGDTG-----TITTETG 514
Query: 602 KVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRA-HTTSHLLNAAL 659
K + + + G +HF VV S + G VE D R +RA H+ +HLL+ AL
Sbjct: 515 KARVTDTKKVAGVFIHFAEVVEGSIERGQGAELTVEHDRR---SAIRANHSATHLLHEAL 571
Query: 660 RRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R L Q+ D DFS + + L+ D + VE+ +N + V+ R M
Sbjct: 572 REALGDHVAQRGSLNAPDRLRFDFS-HNKALTADEIGRVERDVNAYVRQNTPVETRIMAP 630
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDIS--------DKENVISREPCCGTHVFNTGHIESC 770
+ L + GE Y D+V ++ + DKE S E C GTHV TG I +
Sbjct: 631 DDARALGAQALF-GEKYGDEVRVVSMGRAATGKGVDKE-TYSIELCGGTHVKRTGDIGAF 688
Query: 771 TVIGYKSYNHGVRSIKCLTGDSS 793
+ + + GVR I+ LTG+++
Sbjct: 689 VLTAESASSAGVRRIEALTGEAA 711
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFKN+F G+ Y R SQKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFTNSGMVQFKNLFTGVEHRDYTRATTSQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K++A A E +T+ +P D+LY T
Sbjct: 89 FFEMLGNFSFGDYFKKEAIPFAWELITR-EFGIPKDKLYTT 128
>gi|17536681|ref|NP_496444.1| Protein AARS-1, isoform a [Caenorhabditis elegans]
gi|74966572|sp|Q23122.2|SYAM_CAEEL RecName: Full=Alanine--tRNA ligase, mitochondrial; AltName:
Full=AlaRS B; AltName: Full=Alanyl-tRNA synthetase;
Flags: Precursor
gi|6176436|gb|AAF05590.1|AF188715_1 alanyl-tRNA synthetase [Caenorhabditis elegans]
gi|14530594|emb|CAA91396.2| Protein AARS-1, isoform a [Caenorhabditis elegans]
Length = 793
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 257/791 (32%), Positives = 394/791 (49%), Gaps = 84/791 (10%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVP-YGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANS 75
+R SF ++F ++ H +++SS ++P D ++ F N+GM QFK + L T + RVAN
Sbjct: 27 LRKSFYEFF-KSKNHEILRSSSVIPDENDGTLLFTNAGMNQFKPLILSSTESR--RVANI 83
Query: 76 QKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYY-KRDACRMALEFLTKPPVSLPL 134
QKC+R GGKHNDL G+D +H TFFEM+GNWSFND + K +ACR A E+L + + +
Sbjct: 84 QKCIRAGGKHNDLDDVGKDLHHQTFFEMMGNWSFNDAFSKEEACRYAWEYLVEI-LGINA 142
Query: 135 DRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEI 194
DRLY +YFGG ++ GLP D E R+IW +GV + I + NFWEMG+ GPCG +EI
Sbjct: 143 DRLYVSYFGGIEKLGLPEDRECREIWKRIGVSSNRILP-FVAENFWEMGAAGPCGPCTEI 201
Query: 195 HYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLV 253
HYD + G +S L VN D + ++EIWNIVF+S R S I L KN+IDTG+GFERL+
Sbjct: 202 HYDRIGGRDASRL--VNID-DSVVEIWNIVFMSSVRDSCGQIRHLGKNHIDTGMGFERLL 258
Query: 254 TILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVA 313
+++QNKTS +DTD+F P+LE +++ + +T S + D ++R+++D+ R TVA
Sbjct: 259 SVVQNKTSNFDTDVFTPILEKTSELAK-----KQYTGSLDSRQDATFRLVADHIRAATVA 313
Query: 314 LADNMFPDATA---KLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDS 370
++D PD T +R ++R A L +++ + EL +A + +VYPEI D+
Sbjct: 314 ISDGAVPDGTGCGFIVRKMMRRAFLQGISKLGIERYAM-SELVPVVASTMKEVYPEIHDT 372
Query: 371 INKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLAR 430
I+ I +E F WK + K K + +A
Sbjct: 373 STHIRKIFNDEEAQF----------WKTVDKA-------------------KKMFDSVAA 403
Query: 431 DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASN 490
+ ISG AF L++T+GL + ELA + FE+ E ++ S+ +
Sbjct: 404 ESKSPIISGRKAFNLFETHGLPLAVTVELARNIGREVDETEFERCRLEAQKVSQKASQFK 463
Query: 491 VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRH 550
+P + FP DK KY Y + + +Y FP + T ++ + Q
Sbjct: 464 LP----ISADDFPSHSDKEKYSYVF--RNGKYEFPQVKTRILQVYKDQQ----------- 506
Query: 551 ARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELAS 610
+ LE N L+ ++ Y GGQ D G +L +E +VE + +
Sbjct: 507 -------KAESLEANDRGFLVLEECQFYGEQGGQTSDTG--HLLIDGREVFEVENAKKIA 557
Query: 611 LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQKS 670
V FG + + L ++D R G MRAH+ +HLLN AL+++ + QK
Sbjct: 558 GGAVTVLFGRAL--LPIRRDLRVEQKLDETRREGVMRAHSATHLLNWALQKLGVGSGQKG 615
Query: 671 CRVFSDECALDFSVYGETLSVDS----VAAVEKYINDVIANQVQVDRRHMRASELPFLTH 726
V D D+S E LS + + E + + I N + E + +
Sbjct: 616 SSVDCDRFRFDYSTGDEDLSKEQRTELLIKCEMKMREFIQNGGFTEIIETSLEEAKKIEN 675
Query: 727 LT--VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRS 784
L V I V ++ + +V E C GTH+ + I+ ++ KS +R
Sbjct: 676 LQSDVKEDRIGGASVRVVALGSGADV-PVECCSGTHIHDVRVIDDVAIMSDKSMGQRLRR 734
Query: 785 IKCLTGDSSKA 795
I LTG + A
Sbjct: 735 IIVLTGKEAAA 745
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 68/99 (68%), Gaps = 4/99 (4%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK + L T + RVAN QKCIR GGKHNDL G+D +H TFFEM
Sbjct: 54 DGTLLFTNAGMNQFKPLILSSTESR--RVANIQKCIRAGGKHNDLDDVGKDLHHQTFFEM 111
Query: 882 LGNWSFNDYY-KRDACRMALEFLTKPPVSLPLDRLYFTF 919
+GNWSFND + K +ACR A E+L + + + DRLY ++
Sbjct: 112 MGNWSFNDAFSKEEACRYAWEYLVE-ILGINADRLYVSY 149
>gi|383114261|ref|ZP_09935026.1| alanyl-tRNA synthetase [Bacteroides sp. D2]
gi|313694030|gb|EFS30865.1| alanyl-tRNA synthetase [Bacteroides sp. D2]
Length = 872
Score = 357 bits (915), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 260/795 (32%), Positives = 386/795 (48%), Gaps = 113/795 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKEIRDSFKNFF-ESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYQR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D+E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEYLYATVFEGSPEEGLSRDDEAASYWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P+L+ I +SG + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGTE-YGKD------KQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +G+
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DNMGE 348
Query: 363 VYPEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
YPE+ Q ++ + + EES ++T L G
Sbjct: 349 AYPELVAQKTLIEKVIKEEEES----------------FLRT--------------LETG 378
Query: 421 VKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
++ L K + + TEISG AFTLYDT+G ++ + + ++T+ + F +++ +
Sbjct: 379 IRLLDKTMEDTKASGKTEISGKDAFTLYDTFGFPLDLTELILRENEMTVNIDEFNEEMQQ 438
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIG 537
K+R++ AA D ++ T + YDY Y+ + RY
Sbjct: 439 QKQRARNAAAIETGDWIILK----EGTTEFVGYDYTEYEASILRYR-------------- 480
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
I+ ++ ++ D T YA +GGQ+ D GV
Sbjct: 481 ---------------------QIKQKNQTLYQIVLDYTPFYAESGGQVGDTGV-----LV 514
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
E +E+ + +H + P + VD R C H+ +HLL+A
Sbjct: 515 SEFETIEVIDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDA 571
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIANQVQVDRRH 715
ALR VL QK V D DFS + + ++ + + VE +N V AN + R+
Sbjct: 572 ALREVLGEHIEQKGSLVTPDSLRFDFSHF-QKVTDEEIRKVEHIVNARVRANIPLKEYRN 630
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ E L + + GE Y D V +I S E C GTHV TG+I ++
Sbjct: 631 IPIEEAKELGAIALF-GEKYGDKVRVIQFGS-----SIEFCGGTHVAATGNIGMVKIMSE 684
Query: 776 KSYNHGVRSIKCLTG 790
S GVR I+ TG
Sbjct: 685 SSVAAGVRRIEAYTG 699
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 63/84 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYQRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTK 905
LGNWSF DY+K++A A E+L +
Sbjct: 93 LGNWSFGDYFKKEAINWAWEYLVE 116
>gi|195953907|ref|YP_002122197.1| alanyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
gi|195933519|gb|ACG58219.1| alanyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
Length = 856
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 262/811 (32%), Positives = 399/811 (49%), Gaps = 124/811 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F N +GHT+VKSS IVP D ++ FVN+GM FKNVFLGL PY R
Sbjct: 1 MKTDEIREKFLSFFEN-KGHTVVKSSSIVPKSDPTLLFVNAGMVPFKNVFLGLESLPYKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ QKC RV GKHNDL GR + HHTFFEMLGN+SF DY+K++A A EF+T+ +
Sbjct: 60 ATSCQKCFRVSGKHNDLESVGRTTRHHTFFEMLGNFSFGDYFKKEAILYAWEFVTE-VLR 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP D++Y + D+E DIW ++ VP D I + G + NFW+MG TGPCGY
Sbjct: 119 LPKDKIYVSVH--------QNDQEAYDIWKDMVKVPEDKIWRMGDEDNFWQMGETGPCGY 170
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SSEI+ D +GE S R +EIWN+VF+ + + + PL+K IDTG+G E
Sbjct: 171 SSEIYID-RGEKYSQDER-------YLEIWNLVFMQFNKDESGHMEPLAKPSIDTGMGLE 222
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +++Q K S ++ D+ +P++ +E +S + + T TD+ + R+++D+SR
Sbjct: 223 RIASVIQGKDSNFEIDIIMPIIHFVEDLSSKR-----YKTDEETDI--AMRVIADHSRAC 275
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
TVA+++ + P + +R V+R A+ + +K+ L K + + + L + YPE+
Sbjct: 276 TVAISEGIIPSNEGRGYVVRKVLRRAVRFGYKI-GIKEEFLYKSIDV-VVDTLKNAYPEL 333
Query: 368 QDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ S ++ +I EESR + L + LE F+ +
Sbjct: 334 EMSKEFVKNIIKAEESRFLETLENS--------------LELFD---------------R 364
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
+A + S ISGD F YDTYG +I+QE+ K +TL + F + L + KE S+
Sbjct: 365 YIAENKS-NVISGDFIFKAYDTYGFPLDILQEMTHEKGMTLDMKGFYELLEKQKEESR-- 421
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
KHF +++K Y + R F T +V I
Sbjct: 422 -------------KHFK-SEEKVDEVYLSIKDKARSIF----TGYTHTEEQAKVLFI--- 460
Query: 547 AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV------AYLTNTTQEN 600
+ G + ++ + + + I +KT Y GGQI D G+ ++ N T+
Sbjct: 461 ----IKDGKMTEELKEQEDGII--ILNKTPFYPEKGGQIGDSGILENSEALFIVNDTK-- 512
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
+G I H G V+ ++ G ++D R R HT++HLL+AALR
Sbjct: 513 --------TPTDGVIAHIGKVIKG-RLRVGTDVLAKIDKERREDIKRHHTSTHLLHAALR 563
Query: 661 RVLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
+ + +++ DE DF+ Y +L + + A+E IN+ I ++
Sbjct: 564 NMFGESVRQAGSYVGDEFLRFDFTFY-RSLKPEELEALEAMINEEIMKNEEI-----FVK 617
Query: 720 ELPFL----THLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
ELP+ T I E Y D V +I D S+E C GTHV TG I +I
Sbjct: 618 ELPYQEAIKTGAIAIFEEKYGDVVRVISAGD----FSKELCGGTHVKRTGDIGYFKLISE 673
Query: 776 KSYNHGVRSIKCLTGDSS-KAAVENGKHLST 805
S G+R I G + + A E+ K L T
Sbjct: 674 SSVGAGIRRIIAKAGRKAVREAYEDSKLLKT 704
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ FVN+GM FKNVFLGL PY R + QKC RV GKHNDL GR + HHT
Sbjct: 28 VPKSDPTLLFVNAGMVPFKNVFLGLESLPYKRATSCQKCFRVSGKHNDLESVGRTTRHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K++A A EF+T+ + LP D++Y +
Sbjct: 88 FFEMLGNFSFGDYFKKEAILYAWEFVTE-VLRLPKDKIYVS 127
>gi|423280068|ref|ZP_17258981.1| alanyl-tRNA synthetase [Bacteroides fragilis HMW 610]
gi|404584404|gb|EKA89069.1| alanyl-tRNA synthetase [Bacteroides fragilis HMW 610]
Length = 872
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 259/793 (32%), Positives = 380/793 (47%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K R SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKETRDSFKNFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYHR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLIDV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + L D E IW + +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEERLERDNEAASIWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F PL+++I +++G + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPLIKSIAQMAGTE-YGKNEQN------DIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +GD
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DSMGD 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ A KE V + E +E G++
Sbjct: 349 AYPEL-----------------------IAQKELIEKVIKEEEESFLRTLE-----TGIR 380
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K +A + TEISG AFTLYDT+G ++ + + +T+ F+ ++ + K
Sbjct: 381 LLDKTMADTKATGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNTVEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA D ++ T + YDY Y+T+ RY
Sbjct: 441 QRARNAAAIETGDWIILK----EGTTEFVGYDYTEYETSILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
++ ++ ++ D T YA +GGQ+ D GV E
Sbjct: 481 -------------------QVKQKNQTLYQIVLDYTPFYAESGGQVGDTGV-----LVSE 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + P + V+ R C H+ +HLL+ AL
Sbjct: 517 FETIEVIDTKKENNLPIHITKKLPEHPEAPMMAC---VNTDKRAACAANHSATHLLDEAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEELRKVEHLVNAKIRANVPLQEHRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y D V +I S E C GTHV TG+I +I S
Sbjct: 633 IEEAKELGAIALF-GEKYGDHVRVIQFGS-----SIEFCGGTHVAATGNIGMVKIISESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYHRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|346226024|ref|ZP_08847166.1| alanyl-tRNA synthetase [Anaerophaga thermohalophila DSM 12881]
Length = 880
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 253/776 (32%), Positives = 389/776 (50%), Gaps = 105/776 (13%)
Query: 28 TQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCVRVGGKHND 87
++ H +V S+P+V D ++ F N+GM QFK++FLG +PRVAN+QKC+RV GKHND
Sbjct: 16 SKQHIIVASAPMVVKNDPTLMFTNAGMNQFKDIFLGNRKPEHPRVANAQKCLRVSGKHND 75
Query: 88 LSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQ 147
L G D+YHHT FEMLGNWSF DY+K +A A EFLTK + + +RLY T F G +
Sbjct: 76 LEEVGHDTYHHTMFEMLGNWSFGDYFKEEAIDWAWEFLTK-ELGIDKNRLYATVFEGDEN 134
Query: 148 YGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHYDM------KGE 201
+ DEE W + +P HI K NFWEMG TGPCG SEIH D+ K +
Sbjct: 135 DNVKRDEEAALAWQKY-LPEKHIIDGNKKDNFWEMGDTGPCGPCSEIHIDLRDIHQRKSK 193
Query: 202 PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTS 261
P L VN D ++IEIWN+VFI + R ++ +V L + ++DTG+GFERL +LQ K+S
Sbjct: 194 PGYEL--VNKDHPEVIEIWNLVFIQYNRRASGELVALPQKHVDTGMGFERLCRVLQGKSS 251
Query: 262 TYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPD 321
YDTD+F P++ I +G + YG + T D + R+++D+ R I ++ D P
Sbjct: 252 NYDTDIFQPIIRQIAAFTGIE-YGASEET------DIAMRVIADHLRTIAFSITDGQLPS 304
Query: 322 ---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLIL 378
A +R ++R A+ V++ + L + E++GD YPE++ I ++
Sbjct: 305 NNKAGYVIRRILRRAVRYGYTFLNVRR-PFMSGLIPALIEVMGDAYPELKAQHELIDKVI 363
Query: 379 GEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEIS 438
EE F +KT E G+ L + + L+ + + +S
Sbjct: 364 YEEEESF--------------LKTL----------ETGITLLDNIIERTLSDNYKV--VS 397
Query: 439 GDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMD 498
G +AF LYDTYG ++ + + + K L + + F++++ ++++A+ A++V D +
Sbjct: 398 GKVAFELYDTYGFPLDLTELILSEKGLVVNRQEFDKEME--AQKARARNAASVETGDWVV 455
Query: 499 LKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASID 558
LK D N + + VG + I ++
Sbjct: 456 LK---------------DDNEEEF---------VGYDFQETEVYITRYR----------- 480
Query: 559 SIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHF 618
+++++ L+F+ T YA +GGQ+ D G ++ N+ N K+ I + IVH
Sbjct: 481 KVKVKNKDQYQLVFNITPFYAESGGQVGDSG--FIQNS---NEKIAILDTKKENDLIVHI 535
Query: 619 GNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDE 677
N + S T R V+ R R HT +HLL+ ALR+VL QK V D
Sbjct: 536 SNELPS---AIEDTFRAVVNMDRRRSTARNHTATHLLHKALRKVLGNHVEQKGSLVHPDY 592
Query: 678 CALDFSVYGETLSVDSVAAVEKYIN-DVIANQVQVDRRHMRASELPFLTHLTVIP--GEI 734
DFS + + +S + + +EK +N D+ AN ++R R + + I GE
Sbjct: 593 LRFDFSHF-QKVSPEDIRQIEKLVNADIRAN---INREEHREVPIDKAREMGAIALFGEK 648
Query: 735 YPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG 790
Y D V I + E C GTHV TG I +IG S + G+R I+ ++G
Sbjct: 649 YGDVVRTIGFGE-----CVELCGGTHVDATGEIGFFRIIGESSVSAGIRRIEAVSG 699
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++FLG +PRVAN+QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDIFLGNRKPEHPRVANAQKCLRVSGKHNDLEEVGHDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K +A A EFLTK + + +RLY T
Sbjct: 92 LGNWSFGDYFKEEAIDWAWEFLTK-ELGIDKNRLYAT 127
>gi|218885980|ref|YP_002435301.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756934|gb|ACL07833.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 879
Score = 356 bits (913), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 248/796 (31%), Positives = 389/796 (48%), Gaps = 108/796 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL++F +QGH +V+SS +VP D S+ F N+GM QFK +FLG Y R
Sbjct: 2 ITANEIRRRFLEFF-QSQGHEIVRSSSLVPKDDPSLLFTNAGMVQFKKIFLGQEKRGYVR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
SQKC+RVGGKHNDL GR + HHTFFEMLGN+SF DY+K DA + A +FLT+ +
Sbjct: 61 ATTSQKCLRVGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKEDAIKFAWKFLTE-DLK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RLY T F D+E RD+WL +P + I + G K NFW MG TGPCG
Sbjct: 120 LPKERLYATVF--------RDDDEARDLWLAHTDIPAERIYRMGEKDNFWSMGDTGPCGP 171
Query: 191 SSEIHYDMKGE-----PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI D +GE P + + + DR +EIWN+VF+ + + + T L K IDT
Sbjct: 172 CSEILID-QGEHMTCGPDCGIGKCDCDR--YLEIWNLVFMQYDQAADGTRTALPKPSIDT 228
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ + Q S +DTDLF +++ ++G ++ ++ T DT+ R+++D
Sbjct: 229 GMGLERIAAVCQGVYSNFDTDLFQAIIQYTCGIAGV-----SYRANDET--DTALRVIAD 281
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+SR + + D + P + LR ++R A + + G + + + + E++GD
Sbjct: 282 HSRSMAFMITDGILPSNEGRGYVLRRLIRRAYRFGRLIGQT--GTFLHKTALKVVEVMGD 339
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE++ + + + ++ EE E+FN + GL +
Sbjct: 340 DYPELRGNADFMARVVREEE------------------------ERFNRTLDKGLA--LL 373
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+ R T ++GD+AF LYDTYG +I+ ++A + T+ E F + E KER
Sbjct: 374 EEELESLRGAGSTRVAGDVAFKLYDTYGFPLDIVNDIAEKRGFTVDEEGFRTLMAEQKER 433
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
+KA +K D S+ + L+ L IG
Sbjct: 434 AKA----------------------AWKGSGESDIASRFHAL--LEEGLRSEFIGYDHLS 469
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD-------IGVAYLTN 595
D + + S L A L+ +T Y +GGQ D G A + +
Sbjct: 470 GDSRVV-ALLDATGLPSEGLPKGAKGYLVATRTPFYGASGGQTGDPGSITSPSGKARVLD 528
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T + + ++ + ++ +++G+I+ P ++V+ R+ R HT +HLL
Sbjct: 529 TLKPSPELTVHQIETVDGEIL------------PDQEVHLQVEEDERVASARNHTCTHLL 576
Query: 656 NAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
+AALRRVL Q V D DF+ + ++ + +AAVE+ +N VI + ++
Sbjct: 577 HAALRRVLGDHVKQAGSLVAPDRLRFDFT-HIAAMTPEEIAAVEREVNRVILANLPLETD 635
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
HM A + + GE Y D+V ++ I+D+ S E C GTH+ TG ++
Sbjct: 636 HM-AYDAALTRGAMALFGEKYGDEVRVVAIADE----SVELCGGTHLRATGQAGLFLILS 690
Query: 775 YKSYNHGVRSIKCLTG 790
GVR I+ +TG
Sbjct: 691 EGGVAAGVRRIEAITG 706
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D S+ F N+GM QFK +FLG Y R SQKC+RVGGKHNDL GR + HHT
Sbjct: 29 VPKDDPSLLFTNAGMVQFKKIFLGQEKRGYVRATTSQKCLRVGGKHNDLENVGRTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A +FLT+ + LP +RLY T
Sbjct: 89 FFEMLGNFSFGDYFKEDAIKFAWKFLTE-DLKLPKERLYAT 128
>gi|146299654|ref|YP_001194245.1| alanyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
gi|205830093|sp|A5FIP9.1|SYA_FLAJ1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|146154072|gb|ABQ04926.1| alanyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
Length = 879
Score = 356 bits (913), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 260/818 (31%), Positives = 386/818 (47%), Gaps = 111/818 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ +R FLD+F ++GHT+V S+PIV D ++ F NSGM QFK FLG PR
Sbjct: 1 MKSQDVRKQFLDFF-ESKGHTIVPSAPIVLKDDPTLMFNNSGMAQFKEFFLGNGTPKSPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 IADTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAINWAWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY + F GS + +P D+E DIW L + D I K NFWEMG GPCG
Sbjct: 119 IPKENLYVSVFEGSKEDNVPFDQEAWDIWKTL-IDEDRIILGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ AL VN D ++EIWN VF+ R + ++ L ++DTG+
Sbjct: 178 SEIHVDLRSAEEKALVSGKSLVNNDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFT--TSNRTDLDTSYRMLSD 305
GFERL LQ KTS YDTD+F+PL+ IE ++GAK T + + ++ + R+++D
Sbjct: 238 GFERLCMALQGKTSNYDTDVFMPLIREIETITGAKYTTNDVTGISEEQNKMNIAIRVVAD 297
Query: 306 YSRMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+ R + A+AD P T + + + F + + +L ++E +GD
Sbjct: 298 HVRAVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLGTKEPFIYKLVETLSEQMGDS 357
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PEI+ ++ EE F +KT L+Q GL+L
Sbjct: 358 FPEIRTQKALCSNVIREEENSF--------------LKT---LDQ-------GLIL---- 389
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + + T I G AF LYDTYG ++ + + + L L E F+++L KERS
Sbjct: 390 LDAVILNNTGDT-IDGKKAFELYDTYGFPIDLTALILSERGLKLDEEGFQEQLQLQKERS 448
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+A + D +++ V DD ++ YD S+ QV
Sbjct: 449 RAASKVTAGDWNVI------VEDDIQEF-VGYDRLSQ------------------QVKIT 483
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTN 595
+ + G L+F+ T Y +GGQ D G + Y+ +
Sbjct: 484 KYRRVESVKDGEIFQ-----------LVFNATPFYGESGGQTGDKGYLEAQNGDIVYIID 532
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T +EN + I SL I N V VDA R H+ +HLL
Sbjct: 533 TKKENNQT-IHLTQSLPENITGTFNAV--------------VDANQRAKTSSNHSATHLL 577
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
+ LR++L T QK V + DFS + + ++ + + VE ++N I + + +
Sbjct: 578 HQGLRKILGTHIEQKGSMVRNASLRFDFSHFSK-VTDEELLEVENFVNARIRESLPLIEK 636
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
E + GE Y D V I D S E C GTHV NT I ++
Sbjct: 637 RAIPKEQALEDGAIALFGEKYGDLVRTIKFGD-----SVELCGGTHVANTSDIWHFKIVS 691
Query: 775 YKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQI 812
+ G+R I+ +T +++K E S A S ++I
Sbjct: 692 EGAVAAGIRRIEAITSEAAKEYFE-----SQAVSLAEI 724
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK FLG PR+A++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFNNSGMAQFKEFFLGNGTPKSPRIADTQKCLRVSGKHNDLEEVGIDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ +P + LY +
Sbjct: 92 LGNWSFGDYFKKEAINWAWELLTE-VYKIPKENLYVS 127
>gi|302666339|ref|XP_003024770.1| hypothetical protein TRV_01052 [Trichophyton verrucosum HKI 0517]
gi|291188840|gb|EFE44159.1| hypothetical protein TRV_01052 [Trichophyton verrucosum HKI 0517]
Length = 925
Score = 355 bits (912), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 268/830 (32%), Positives = 390/830 (46%), Gaps = 125/830 (15%)
Query: 4 PNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLG 63
P V + +R +FLDYF GHT P NS Q K
Sbjct: 10 PAGQQTVEWPALRVRDTFLDYF-KKNGHTFGTVDP------------NSDFAQLK----- 51
Query: 64 LTPAPYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALE 123
R NSQK DL G+DSYHHTFFEMLGNWSF DY+K++A + + E
Sbjct: 52 -------RAHNSQK---------DLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIQFSWE 95
Query: 124 FLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMG 183
LTK L DRLY TYF G++ G+ D E RDIW +GV DHI MK NFWEMG
Sbjct: 96 LLTKV-YGLDPDRLYVTYFEGNEAAGVGPDIEARDIWRSVGVKDDHILTGDMKDNFWEMG 154
Query: 184 STGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYI 243
GPCG SEIHYD G ++A VN D D++EIWN VFI + R ++ PL ++
Sbjct: 155 DQGPCGPCSEIHYDRIGGRNAAHL-VNQDDPDVLEIWNNVFIQYNREPDRSLRPLPNQHV 213
Query: 244 DTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRML 303
DTGLG+ERLV+ILQNK+S YDTD+F PL I+ ++GA+PY F + +DT+YR++
Sbjct: 214 DTGLGYERLVSILQNKSSNYDTDVFTPLFNAIQNITGARPYTGKFGAEDADGIDTAYRVV 273
Query: 304 SDYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL 360
+D+ R +T A+ D P+ +R V+R + + +V+ G +L + E +
Sbjct: 274 ADHLRTLTFAITDGAAPNNEGRGYVVRRVLRRGVRYARKYLQVEIGSFFSKLVPALVEQM 333
Query: 361 GDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
GD++PEI+ + IL EE F K L + + + E +
Sbjct: 334 GDMFPEIKRKQTDVMEILDEEEVSFA----------KTLDRGERQFENY----------- 372
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
Q A D ++ G + LYDT+G ++ + +A ++LT+ FE+ + K
Sbjct: 373 -----AQQALDSGAGKLPGADVWRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEARLKAK 427
Query: 481 ERSK--AKAASN-----VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
E SK AK AS+ V + ++ P TDD K+
Sbjct: 428 EASKGQAKTASDLLKLTVHTLSTLEKNGVPKTDDDAKF---------------------- 465
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQ-LEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
G + AI H + IDS + + N +G+I DKTN YA GGQ D G
Sbjct: 466 ---GKGNIVANIKAICHGKD--VIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTGKIV 520
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTT 651
+ + +++ + G ++H G + +F V + + E D R HT
Sbjct: 521 IDGQAE----LDVQNVQMYGGYVLHTGFIKYGNFSVNDSVIA--EYDELRRWPIRNNHTG 574
Query: 652 SHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ 710
+H+LN ALR VL QK V +++ DFS + +S + +E D I
Sbjct: 575 THILNFALREVLGDGIDQKGSLVAAEKLRFDFS-HKSAISDSDLEKIEAKSTDYIRQNCA 633
Query: 711 VDRRHMRASELPFLTHLTVIPGEIYPD-----------DVILIDISD-KENVISREPCCG 758
V + + + +T + + GE YPD D IL ++ D + +S E C G
Sbjct: 634 VYSQEVPLATAREITGVRAVFGETYPDPVRVVSVGVELDEILKNVKDPRWEGVSIEFCGG 693
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHLS 804
THV TG I+ ++ G+R I +TG+ + + A E G+ L+
Sbjct: 694 THVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQRVAREFGERLN 743
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 46/75 (61%), Gaps = 10/75 (13%)
Query: 845 APYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 904
A R NSQK DL G+DSYHHTFFEMLGNWSF DY+K++A + + E LT
Sbjct: 48 AQLKRAHNSQK---------DLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIQFSWELLT 98
Query: 905 KPPVSLPLDRLYFTF 919
K L DRLY T+
Sbjct: 99 K-VYGLDPDRLYVTY 112
>gi|325280523|ref|YP_004253065.1| alanyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
gi|324312332|gb|ADY32885.1| alanyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
Length = 877
Score = 355 bits (912), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 257/802 (32%), Positives = 392/802 (48%), Gaps = 108/802 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR FLD+F ++GHT+V S+P+V D ++ F N+GM QFK++ LG + R
Sbjct: 1 MKSAEIRQKFLDFF-ESKGHTIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNINPKHRR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K DA A EFLT +
Sbjct: 60 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEDAIAFAWEFLT-GVMG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +RLY T F GS + GL D E R IW+ + D I K NFWEMG GPCG
Sbjct: 119 LDKNRLYATVFEGSKEDGLEGDAEARKIWMNY-LSEDRILFGNKKDNFWEMGDMGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E L VN D +IEIWN+VF+ + R + ++ L +++DTG+
Sbjct: 178 SEIHIDLRPEEERKLKSGRELVNQDNPLVIEIWNLVFMQYNRKADGSLENLPNHHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +Q KTS YDTD+F P+++ I ++SG K YG + D D + R+++D+
Sbjct: 238 GFERLCMAVQGKTSNYDTDVFTPIIDEISRLSGLK-YGVSH------DADVAMRVIADHL 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I+ ++ D P A +R ++R A+ + K+ + + L + E++G Y
Sbjct: 291 RTISFSITDGQLPSNVKAGYVIRRILRRAVRYAYTYLDQKEAFMYR-LVPVLIEVMGKHY 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ I+ ++ EE F LR + G+ L + +
Sbjct: 350 PELVAQQELIEKVIREEENAF--LRTL----------------------DKGIKLLDRII 385
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
K A D I G++AF LYDTYG ++ + + K L + F+ ++ KERS+
Sbjct: 386 EKTKAED--FLTIPGNVAFELYDTYGFPLDLTELILREKGLVVNRREFKAEMEAQKERSR 443
Query: 485 AKAASNVPD-IDLMDLKHFPVTDDKYK---YDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+ ++ + D I+L+D DD + YDY + RY
Sbjct: 444 SASSVDTDDWIELID-------DDVQEFVGYDYTEVEVKITRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
+ ++ + L+F+ T Y GGQ+ D GV E
Sbjct: 481 -------------------KVVTKNKTFYHLVFNITPFYGEGGGQVGDSGV-----LIGE 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+ I + G +H + VT ++ VD R+ H+ +HLL+ AL
Sbjct: 517 KETIRIIDTKKENGLTIHLAEKMPE-DVTQTFIAK--VDEHKRVLTANNHSATHLLDYAL 573
Query: 660 RRVLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR-RHMR 717
R+VL ++ SDE DFS + + ++ + +A V +N +I + ++ R +
Sbjct: 574 RKVLGKHVEQKGSYVSDEHLRFDFSHF-QKVTDEELAEVAAIVNRLIRMNIPLEEHRSVP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
++ + L + GE Y D V +I + S E C GTHV TG I ++ S
Sbjct: 633 MAKAQAMGALAIF-GEKYGDLVRVIKYGE-----SVELCGGTHVPATGQIGFFKILSESS 686
Query: 778 YNHGVRSIKCLTGDSSKAAVEN 799
+ GVR I+ +T D ++ + N
Sbjct: 687 VSAGVRRIEAITADKAEEYINN 708
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG + RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDIILGNINPKHRRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K DA A EFLT + L +RLY T
Sbjct: 92 LGNWSFGDYFKEDAIAFAWEFLT-GVMGLDKNRLYAT 127
>gi|212693638|ref|ZP_03301766.1| hypothetical protein BACDOR_03157 [Bacteroides dorei DSM 17855]
gi|265755936|ref|ZP_06090403.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
gi|212663891|gb|EEB24465.1| alanine--tRNA ligase [Bacteroides dorei DSM 17855]
gi|263234014|gb|EEZ19615.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
Length = 872
Score = 355 bits (911), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 260/795 (32%), Positives = 379/795 (47%), Gaps = 113/795 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K IR SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 MTAKEIRDSFKSFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIGWAWEYLVDVLKI 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D LY T F GS + GL D E W + +P+DHI NFWEMG TGPCG
Sbjct: 121 DPKD-LYATVFEGSPEEGLERDNEAASYWEQF-LPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSAL----ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D + E A VN D +IEIWN+VF+ R + ++ L IDTG+
Sbjct: 179 SEIHIDSRSEEEKAQIPGNQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV LQ KTS YDTD+F P+L+ I +++G T+ N+ D+ + R+++D+
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPMLKAIAEMAGT-----TYGQDNQKDI--AMRVIADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++ D P A +R ++R A+ KQ + K L I E +G+ Y
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-ENMGEAY 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ + KI + + LR L G++ L
Sbjct: 351 PEL--NAQKILIEKVIKEEEESFLRT--------------------------LETGIRLL 382
Query: 425 TKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
K + A+ EISG AFTLYDT+G ++ + + +T+ E F ++ + KER
Sbjct: 383 DKTMNDAKAAGKKEISGVDAFTLYDTFGFPLDLTELILRENGMTVNEEEFNAEMQKQKER 442
Query: 483 SKAKAASNVPDIDLMDLK----HFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIG 537
++ AA V D + +K HF YD+ Y+T+ RY
Sbjct: 443 ARNAAA--VETGDWITIKEGDTHF------VGYDFTEYETSILRYR-------------- 480
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
I+ ++ ++ T YA +GGQ+ D GV
Sbjct: 481 ---------------------QIKQKNQTLYQIVLSDTPFYAESGGQVGDTGV-----IV 514
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
E +EI + +H + P + VD R C H+ +HLL+
Sbjct: 515 SEFETIEIIDTKKENNLPIHITKKLPEHLDVPMMAC---VDTEKRAACAANHSCTHLLDE 571
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRH 715
ALR+VL T QK V + DFS + + ++ + + VE +N I + + + R+
Sbjct: 572 ALRQVLGTHVEQKGSLVTPESLRFDFSHF-QKVTDEQLREVEHLVNAKIRENIPLTEYRN 630
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ + L + + GE Y D+V ++ + S E C GTHV TG I +I
Sbjct: 631 LPIEKAKELGAIALF-GEKYGDEVRVVQFGN-----SIEFCGGTHVSATGKIGMVRIISE 684
Query: 776 KSYNHGVRSIKCLTG 790
S GVR I+ +TG
Sbjct: 685 SSVAAGVRRIEAITG 699
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAIGWAWEYL 114
>gi|345513425|ref|ZP_08792946.1| alanyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
gi|423228885|ref|ZP_17215291.1| alanyl-tRNA synthetase [Bacteroides dorei CL02T00C15]
gi|423242281|ref|ZP_17223390.1| alanyl-tRNA synthetase [Bacteroides dorei CL03T12C01]
gi|423247697|ref|ZP_17228745.1| alanyl-tRNA synthetase [Bacteroides dorei CL02T12C06]
gi|345456222|gb|EEO47501.2| alanyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
gi|392631590|gb|EIY25561.1| alanyl-tRNA synthetase [Bacteroides dorei CL02T12C06]
gi|392635624|gb|EIY29523.1| alanyl-tRNA synthetase [Bacteroides dorei CL02T00C15]
gi|392639567|gb|EIY33383.1| alanyl-tRNA synthetase [Bacteroides dorei CL03T12C01]
Length = 871
Score = 355 bits (911), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 260/795 (32%), Positives = 379/795 (47%), Gaps = 113/795 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K IR SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 1 MTAKEIRDSFKSFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L
Sbjct: 60 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIGWAWEYLVDVLKI 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D LY T F GS + GL D E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 DPKD-LYATVFEGSPEEGLERDNEAASYWEQF-LPKDHILNGNKHDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGEPSSAL----ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D + E A VN D +IEIWN+VF+ R + ++ L IDTG+
Sbjct: 178 SEIHIDSRSEEEKAQIPGNQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV LQ KTS YDTD+F P+L+ I +++G T+ N+ D+ + R+++D+
Sbjct: 238 GFERLVRTLQGKTSNYDTDVFQPMLKAIAEMAGT-----TYGQDNQKDI--AMRVIADHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++ D P A +R ++R A+ KQ + K L I E +G+ Y
Sbjct: 291 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-ENMGEAY 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ + KI + + LR L G++ L
Sbjct: 350 PEL--NAQKILIEKVIKEEEESFLRT--------------------------LETGIRLL 381
Query: 425 TKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
K + A+ EISG AFTLYDT+G ++ + + +T+ E F ++ + KER
Sbjct: 382 DKTMNDAKAAGKKEISGVDAFTLYDTFGFPLDLTELILRENGMTVNEEEFNAEMQKQKER 441
Query: 483 SKAKAASNVPDIDLMDLK----HFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIG 537
++ AA V D + +K HF YD+ Y+T+ RY
Sbjct: 442 ARNAAA--VETGDWITIKEGDTHF------VGYDFTEYETSILRYR-------------- 479
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
I+ ++ ++ T YA +GGQ+ D GV
Sbjct: 480 ---------------------QIKQKNQTLYQIVLSDTPFYAESGGQVGDTGV-----IV 513
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
E +EI + +H + P + VD R C H+ +HLL+
Sbjct: 514 SEFETIEIIDTKKENNLPIHITKKLPEHLDVPMMAC---VDTEKRAACAANHSCTHLLDE 570
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRH 715
ALR+VL T QK V + DFS + + ++ + + VE +N I + + + R+
Sbjct: 571 ALRQVLGTHVEQKGSLVTPESLRFDFSHF-QKVTDEQLREVEHLVNAKIRENIPLTEYRN 629
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ + L + + GE Y D+V ++ + S E C GTHV TG I +I
Sbjct: 630 LPIEKAKELGAIALF-GEKYGDEVRVVQFGN-----SIEFCGGTHVSATGKIGMVRIISE 683
Query: 776 KSYNHGVRSIKCLTG 790
S GVR I+ +TG
Sbjct: 684 SSVAAGVRRIEAITG 698
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 92 LGNWSFGDYFKKEAIGWAWEYL 113
>gi|255690436|ref|ZP_05414111.1| alanine--tRNA ligase [Bacteroides finegoldii DSM 17565]
gi|260623884|gb|EEX46755.1| alanine--tRNA ligase [Bacteroides finegoldii DSM 17565]
Length = 872
Score = 355 bits (911), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 262/795 (32%), Positives = 384/795 (48%), Gaps = 113/795 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKEIRDSFKNFF-ESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D+E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLSRDDEAASYWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P+L+ I +S + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPMLKAIAAMSDTE-YGKD------KQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I E +G+
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-ENMGE 348
Query: 363 VYPEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
YPE+ Q ++ + + EES ++T L G
Sbjct: 349 AYPELIAQKTLIEKVIKEEEES----------------FLRT--------------LETG 378
Query: 421 VKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
++ L K + + TEISG AFTLYDT+G ++ + + + + E F +++ +
Sbjct: 379 IRLLDKTMEDTKAAGKTEISGKDAFTLYDTFGFPLDLTELILRENGMIVNIEEFNEEMQQ 438
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIG 537
K+R++ AA + D + LK T + YDY Y+ + RY
Sbjct: 439 QKQRARNAAA--IETGDWITLKEG--TTEFVGYDYTEYEASILRYR-------------- 480
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
I+ ++ ++ D T YA +GGQ+ D GV
Sbjct: 481 ---------------------QIRQKNQTLYQIVLDYTPFYAESGGQVGDTGV-----LV 514
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
E +E+ + +H + P + VD R C H+ +HLL++
Sbjct: 515 SEFETIEVIDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDS 571
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRH 715
ALR VL QK V D DFS + + ++ + + VE +N I AN + R+
Sbjct: 572 ALREVLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEEIRKVEHIVNAKIRANIPLKEYRN 630
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ E L + + GE Y D V +I S E C GTHV TG+I +I
Sbjct: 631 IPIEEAKELGAIALF-GEKYGDRVRVIQFGS-----SIEFCGGTHVAATGNIGMVKIISE 684
Query: 776 KSYNHGVRSIKCLTG 790
S GVR I+ TG
Sbjct: 685 SSVAAGVRRIEAYTG 699
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|153807409|ref|ZP_01960077.1| hypothetical protein BACCAC_01688 [Bacteroides caccae ATCC 43185]
gi|149129771|gb|EDM20983.1| alanine--tRNA ligase [Bacteroides caccae ATCC 43185]
Length = 872
Score = 355 bits (911), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 263/793 (33%), Positives = 383/793 (48%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKEIRDSFKNFF-ESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYQR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEV-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D+E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLSRDDEAASYWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P+L+ I +SG + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPMLKAIAVMSGTE-YGKD------KQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +GD
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-DNMGD 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ ++ EE F LR L G++
Sbjct: 349 AYPELIAQKTLIEKVIKEEEEAF--LRT--------------------------LETGIR 380
Query: 423 YLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K + + EISG AFTLYDT+G ++ + + +T+ E F ++ + K
Sbjct: 381 LLDKTMEDTKAAGKIEISGKDAFTLYDTFGFPLDLTELILRENGMTVNLEEFNAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA + D + LK T + YDY Y+ + RY
Sbjct: 441 QRARNAAA--IETGDWITLKEG--TTEFVGYDYTEYEASILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
I+ ++ ++ D T YA +GGQ+ D GV E
Sbjct: 481 -------------------QIKQKNQTLYQIVLDYTPFYAESGGQVGDTGV-----LVSE 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + P + V+ R C H+ +HLL+AAL
Sbjct: 517 FETIEVIDTKKENNLPIHITKKLPEHPEAPFMAC---VNTDKRAACAANHSATHLLDAAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHIEQKGSLVTPDSLRFDFSHF-QKVTDEEIRQVEHIVNARIRANIPLKEYRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y D V +I S E C GTHV TG+I ++ S
Sbjct: 633 IEEAKELGAIALF-GEKYGDRVRVIQFGS-----SIEFCGGTHVAATGNIGMVKIVSESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYQRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E+L + + L + LY T
Sbjct: 93 LGNWSFGDYFKKEAINWAWEYLVE-VLKLNPEHLYAT 128
>gi|399217153|emb|CCF73840.1| unnamed protein product [Babesia microti strain RI]
Length = 880
Score = 355 bits (911), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 263/838 (31%), Positives = 422/838 (50%), Gaps = 115/838 (13%)
Query: 7 SSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP 66
S +R+ SK ++S F++YF ++ HT S +VP D S+ FVN+GM QFK + +G
Sbjct: 5 SDKIRVPSKVVKSQFINYF-ESKNHTHWPGSSVVPNNDPSLLFVNAGMNQFKQIIMGQID 63
Query: 67 -----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMA 121
+ R NSQ+C+R GGKHNDL G+DSYHHTFFEMLGNWSF DY K DA A
Sbjct: 64 KDSGMSKLTRACNSQRCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYLKEDAIDFA 123
Query: 122 LEFLTK----PPVSLPLDRLYFTYFGGSDQY-GLPCDEETRDIWLELGVPRDHIKKEGMK 176
+ L P L LY TYFGG ++ GLP D E+RD WL+ +P + + G K
Sbjct: 124 WDLLVNIYNLDPTRLV---LYATYFGGDPEHKGLPPDLESRDKWLKY-LPENKVLPFGCK 179
Query: 177 CNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIV 236
NFWEM TGPCG +EIHYD G+ +A VNAD +++E+WN+VF+ + R ++
Sbjct: 180 DNFWEMADTGPCGPCTEIHYDHVGDRDAA-NLVNADSPEVVELWNLVFMEYNREGNGSLK 238
Query: 237 PLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEK-VSGAKPY-GRT------F 288
L K +DTG+GFERLV+++ TS YD D+F + I+ + PY G+ F
Sbjct: 239 KLPKKCVDTGMGFERLVSVINGFTSNYDCDMFTTIHNEIQNLLPNIPPYAGKVITLFIKF 298
Query: 289 TTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQ 345
T ++ +DT+YR++SD+ R IT+A++D + P+ + LR ++R A++ + F +
Sbjct: 299 GTDDKLLIDTTYRVISDHIRCITIAISDGIEPNNEGRGYVLRRILRRAIVYGKLYFNANE 358
Query: 346 GKLVKELSYNIAEILGDVYPEIQD-SINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQP 404
L K L +AE L EI ++K+ ++ +E +F + V+++ + +
Sbjct: 359 PWLYK-LIPTVAETL-----EISGYKVDKVVTVVKDEEVLFSSTLDKGVEKFNKICNS-- 410
Query: 405 ELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKK 464
L+ +I ISG AF LY ++G ++ Q +A +
Sbjct: 411 -LKSGDI-------------------------ISGKEAFLLYSSFGFPLDLTQIMANERN 444
Query: 465 LTLCHEAFEQKLNELKERSKAKAAS-----NVPDIDLMDLKH-------FPVTDDKYKYD 512
+ + F++ L E + S+A +S N+ D D+ H TDD KY+
Sbjct: 445 IGVDMVGFDRALLEHQRASEAINSSHDNVNNLIDTLSADVIHQIEQYTGIFTTDDSLKYE 504
Query: 513 YHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIF 572
+ +S D ++ I G Q + S D I G++
Sbjct: 505 W----SSAEGVGDSFDCKVIAIWDGKQ--------FPQLVNPTSTDGI-------YGIVL 545
Query: 573 DKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELAS--LEGKIVHFGNVVSSFKVTPG 630
D+T Y+ +GGQ+ DIG L NG V L + + ++H G+V+ K+ G
Sbjct: 546 DRTPFYSESGGQVSDIGQFTL------NGSVCFNVLKAHKMGSYVIHVGHVLG--KIGVG 597
Query: 631 LTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTY-QKSCRVFSDECALDFSVYGETL 689
+ V +R G + HT++H+LN A+RR+L+ QK V ++ D++ + L
Sbjct: 598 DVIKSCVSYELRCGSAKNHTSTHMLNYAIRRILSDNVDQKGSLVDPEKLRFDYNT-SKPL 656
Query: 690 SVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILI------D 743
++ + ++ ++N++I++ + V ++ + + + GE YP +V L+ D
Sbjct: 657 EMEQIVTLQNFLNEMISSSLPVSTYVLKLENAMKINGIRAVFGESYPQNVRLLAIGLSGD 716
Query: 744 ISDKENV----ISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
+ + E + IS E C GTHV NT I + V + + G+R I C+TG + A+
Sbjct: 717 LPEIEQLDGTKISLELCGGTHVSNTSEIRAIYVTCEEGISKGIRRITCITGKVAMEAM 774
Score = 109 bits (273), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 64/109 (58%), Gaps = 9/109 (8%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D S+ FVN+GM QFK + +G + R NSQ+CIR GGKHNDL G+D
Sbjct: 37 VPNNDPSLLFVNAGMNQFKQIIMGQIDKDSGMSKLTRACNSQRCIRAGGKHNDLDDVGKD 96
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK----PPVSLPLDRLYF 917
SYHHTFFEMLGNWSF DY K DA A + L P L L YF
Sbjct: 97 SYHHTFFEMLGNWSFGDYLKEDAIDFAWDLLVNIYNLDPTRLVLYATYF 145
>gi|284037267|ref|YP_003387197.1| alanyl-tRNA synthetase [Spirosoma linguale DSM 74]
gi|283816560|gb|ADB38398.1| alanyl-tRNA synthetase [Spirosoma linguale DSM 74]
Length = 890
Score = 355 bits (911), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 271/828 (32%), Positives = 402/828 (48%), Gaps = 121/828 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR FLD+F + Q H +V S+P+V D ++ F NSGM QFK+ FLG P R
Sbjct: 1 MTSHEIRRHFLDFFQSKQ-HLIVASAPLVAKNDPTLMFNNSGMAQFKDFFLGNGTPPSKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 VADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEAITWAWELLTEV-YK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY + F G + +P D+E D+W + V D I K NFWEMG TGPCG
Sbjct: 119 LPKDRLYVSVFQGDAKDNVPFDQEAFDLWKPI-VGEDRIIYGNKKDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKG------EPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ +P L VNAD ++EIWN+VF+ R + ++ L ++DT
Sbjct: 178 SEIHVDLRTPEEIAEKPGKEL--VNADHPQVVEIWNLVFMQFNRKADGSLEALPARHVDT 235
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL +QNK S YDTD+F ++ IE++SG T T D + R++SD
Sbjct: 236 GMGFERLCMAIQNKRSNYDTDVFTGTIKVIEEISGISYTAGTGMT------DVAMRVISD 289
Query: 306 YSRMITVALADNMFPDATAKLRNVVRDALLISE-------DVFKVKQGKLVKELSYNIAE 358
+ R ++ A+AD + P + AK V+R L + ++ + KLV L+ A
Sbjct: 290 HIRAVSFAIADGLVP-SNAKAGYVIRRILRRAIRYGYSYLNLAEPFMTKLVPTLAMQFA- 347
Query: 359 ILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
DV+PE+ + + ++ EE + + + G
Sbjct: 348 ---DVFPELTAQRDFVATVIREE--------------------------EISFLRTLGTG 378
Query: 419 LG-VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
LG + + QL D TEI G+ F L DT+G ++ +A K+LT+ F++ L
Sbjct: 379 LGRLDQIIGQLTTDGK-TEIPGETVFELNDTFGFPADLTALIAREKRLTIDEAGFQKALQ 437
Query: 478 ELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
E K RS+ A+S+ D D N +T+ V V
Sbjct: 438 EQKARSRKDASSSAGD--------------------WIDVN---------ETDRVEFVGY 468
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
DQ +++ + IQ + V ++ DKT YA +GGQI D G L
Sbjct: 469 DQPEAY-AQIVKYRK-------IQNKQGTQVQVVLDKTPFYAESGGQIGDTGTLELF--- 517
Query: 598 QENGKVEIGELASLEGK-----IVHFGNVVSSFK--VTPGLTSRVEVDARMRLGCMRAHT 650
+G +IG L L+ K +H V+ +T + ++ R H+
Sbjct: 518 --SGSDQIGTLTVLDTKKENDLTIHIVQDVTGIDDLLTEADSVYAVINTTRRGLTSSNHS 575
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+HLL+AALR VL T QK V D DFS + + ++ + +A VE+ +N+ I +
Sbjct: 576 ATHLLHAALRDVLGTHVGQKGSYVGPDALRFDFSHFSK-VTDEQLAEVERIVNEKIREDI 634
Query: 710 QVDRRH----MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTG 765
++D + +A EL T + GE Y D V +I +V E C GTHV TG
Sbjct: 635 KLDEKRNVPIGQAKEL----GATALFGEKYGDFVRVITFDPNYSV---ELCGGTHVPATG 687
Query: 766 HIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQIL 813
HI G S + G+R ++ T ++A V + ++ + ++L
Sbjct: 688 HIGLFKFTGEGSVSTGIRRVEAKTSAGAEALVN--EQMAVVSELKELL 733
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK+ FLG P RVA++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFNNSGMAQFKDFFLGNGTPPSKRVADTQKCLRVSGKHNDLEDVGFDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ LP DRLY +
Sbjct: 92 LGNWSFGDYFKKEAITWAWELLTE-VYKLPKDRLYVS 127
>gi|327402220|ref|YP_004343058.1| alanyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
gi|327317728|gb|AEA42220.1| alanyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
Length = 871
Score = 355 bits (911), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 250/785 (31%), Positives = 386/785 (49%), Gaps = 104/785 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IR F D+F ++GH +V S+P+V D ++ F N+GM QFK+ FLG RVANSQ
Sbjct: 6 IRKQFFDFFA-SKGHQIVPSAPMVVKNDPTLMFTNAGMNQFKDFFLGNAVPKNRRVANSQ 64
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K +A A E LT+ +P DR
Sbjct: 65 KCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKEEAITWAWELLTE-VYKIPKDR 123
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHY 196
LY T F G ++ G+P D+E+ DIW + D I K NFWEMG TGPCG +EIH
Sbjct: 124 LYVTVFEGDEKDGVPKDQESYDIWKRF-IAEDRIIMASKKDNFWEMGDTGPCGPCTEIHV 182
Query: 197 DMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
D + P++ A+ VN D +IEIWN VF+ R + ++ PL ++DTG+G E
Sbjct: 183 DNR--PATERAKEDGKKYVNEDHPQVIEIWNNVFMQFNRKADGSLEPLPATHVDTGMGLE 240
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RL LQ+KTS YD DLF L++ +E+VSG K YG TT D + R+++D+ R I
Sbjct: 241 RLAMTLQDKTSNYDIDLFQTLIQHMEQVSG-KKYGENETT------DIALRVIADHVRAI 293
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
++AD P T +R ++R A+ +K+ + LS + +++GD + E+
Sbjct: 294 AFSIADGQLPSNTGAGYVIRRILRRAVRYGYQTLGLKE-PFLSGLSVVLGKVMGDPFSEL 352
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
++ ++ EE EL F +E+ G+K +
Sbjct: 353 IKQGELVEKVIREE-----------------------ELSFFRTLEQ-----GLKRMDNL 384
Query: 428 L--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ AR T + G F LYDT+G ++ +A KL + + F+ +L K+++++
Sbjct: 385 IAQARKTRETILQGPAVFELYDTFGFPIDLTSLIARENKLLVDEDGFDTELQ--KQKARS 442
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
+AA+++ D + LK D+ + + L T +
Sbjct: 443 RAATSIETDDWVVLKK--------------DSEEEFVGYDHLTTTV-------------- 474
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
+++ + ++ + ++ L+F+ T YA GGQ+ D G + N + I
Sbjct: 475 EIVKYRK-------VKQKQRSFYQLVFNLTPFYAEGGGQVGDTGT-----ISNANESLTI 522
Query: 606 GELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTC 665
+ G IVH + + K+ T+RV ++R RL H+ +HLL+ ALR VL
Sbjct: 523 FDTKKENGLIVHLVDELPE-KIDGQFTARVNEESR-RLSASN-HSATHLLHHALRTVLGA 579
Query: 666 -TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFL 724
QK V + DFS + + ++ + +A +E + D I + ++ +
Sbjct: 580 HVEQKGSLVNPNYLRFDFSHFSK-VTDEEMAKIEAIVIDGIRQNLSLEESRNVPIDAAQE 638
Query: 725 THLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRS 784
+ GE Y D V +I D S E C GTHV NTG I + + G+R
Sbjct: 639 MGAMALFGEKYGDTVRVIKFGD-----SIELCGGTHVQNTGQIGLFKIQSESAVAAGIRR 693
Query: 785 IKCLT 789
I+ +T
Sbjct: 694 IEAIT 698
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ FLG RVANSQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDFFLGNAVPKNRRVANSQKCLRVSGKHNDLEEVGVDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K +A A E LT+ +P DRLY T
Sbjct: 92 LGNWSFGDYFKEEAITWAWELLTE-VYKIPKDRLYVT 127
>gi|380693755|ref|ZP_09858614.1| alanyl-tRNA synthetase [Bacteroides faecis MAJ27]
Length = 872
Score = 355 bits (911), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 262/793 (33%), Positives = 384/793 (48%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKEIRDSFKNFF-ESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYTR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVE-VLK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D+E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLSRDDEAASYWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P+L+ I ++G + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPMLKAIAAIAGTE-YGKD------KQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +GD
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQSFMYKLLPVLI-DNMGD 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ ++ EE F LR L G++
Sbjct: 349 AYPELIAQKGLIEKVIKEEEEAF--LRT--------------------------LETGIR 380
Query: 423 YLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K + + TEISG AFTLYDT+G ++ + + +T+ E F +++ + K
Sbjct: 381 LLDKTMEDTKAAGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNLEEFNEEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA V D + L+ T + YDY Y+ + RY
Sbjct: 441 QRARNAAA--VETGDWVTLREG--TTEFVGYDYTEYEASILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
I+ ++ ++ D T YA +GGQI D GV E
Sbjct: 481 -------------------QIKQKNQTLYQIVLDYTPFYAESGGQIGDTGV-----LVSE 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + P + VD R C H+ +HLL++AL
Sbjct: 517 FETIEVIDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDRRAACAANHSATHLLDSAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHIEQKGSLVTPDSLRFDFSHF-QKVTDEEIRKVEHLVNAKIRANIPLKEYRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y + V +I S E C G HV TG+I ++ S
Sbjct: 633 IEEAKELGAIALF-GEKYGERVRVIQFGS-----SIEFCGGIHVAATGNIGMIKIVSESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYTRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E+L + + L + LY T
Sbjct: 93 LGNWSFGDYFKKEAINWAWEYLVE-VLKLNPEHLYAT 128
>gi|319901112|ref|YP_004160840.1| alanyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
gi|319416143|gb|ADV43254.1| alanyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
Length = 872
Score = 355 bits (910), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 262/793 (33%), Positives = 375/793 (47%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTANEIRDSFKSFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVLKL 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D LY T F GS + GL D E W + +P+DHI NFWEMG TGPCG
Sbjct: 121 DPKD-LYATVFEGSPEEGLERDNEAASYWEQF-LPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D + E P S L VN D +IEIWN+VF+ + R + ++ L IDT
Sbjct: 179 SEIHVDSRTEEEKAKVPGSQL--VNKDHPQVIEIWNLVFMQYNRKADGSLEGLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV LQ KTS YDTD+F P+L+ I ++G YG+ D + R+++D
Sbjct: 237 GMGFERLVRTLQGKTSNYDTDVFQPMLKAIADMAGT-TYGKN------EQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + + L I E +G
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYRLLPVLI-ENMGG 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I ++ EE F LR L G++
Sbjct: 349 SYPELIAQKELIAKVIKEEEDSF--LRT--------------------------LETGIR 380
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K +A + TE+SG AFTLYDT+G ++ + + +T F ++ +
Sbjct: 381 LLDKTMADAKAAGKTEVSGKDAFTLYDTFGFPLDLTELILRENGMTADLNEFNAEMEQ-- 438
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
++S+A+ A+ + D + LK T + YD+ Y+T+ RY
Sbjct: 439 QKSRARNAAAIETGDWITLKEG--TTEFVGYDFTEYETSILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
I+ ++ ++ DKT YA +GGQ+ D GV E
Sbjct: 481 -------------------QIKQKNQTLYQIVLDKTPFYAESGGQVGDTGV-----LVSE 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+++ + +H + P + VD R C H+ +HLL+AAL
Sbjct: 517 FETIDVIDTKKENNLPIHITKKLPEHLEAPMMAC---VDTDKRAACAANHSATHLLDAAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + +E N I AN + R M
Sbjct: 574 REVLGDHVEQKGSLVTPDSLRFDFSHF-QKVTDEELRQIEHIANAKIRANIPLKEYRDMP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
+ L + + GE Y D V +I S E C GTHV TG+I ++ S
Sbjct: 633 IEDAKELGAIALF-GEKYGDHVRVIQFGS-----SVEFCGGTHVAATGNIGMVKIVSESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|156743640|ref|YP_001433769.1| alanyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
gi|205830195|sp|A7NQA5.1|SYA_ROSCS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|156234968|gb|ABU59751.1| alanyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
Length = 905
Score = 355 bits (910), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 270/826 (32%), Positives = 391/826 (47%), Gaps = 131/826 (15%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP 70
RL S +IR FL +F +GH V SS ++P D ++ F NSGM QFK+ FLGL PY
Sbjct: 3 RLSSAAIREQFLRFF-EERGHVRVPSSSLIPGNDPTLLFTNSGMVQFKDTFLGLEQRPYT 61
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R +QKC+RV GKHNDL G HHTFFEMLGN+SF DY+K +A MA E LTK
Sbjct: 62 RATTAQKCLRVSGKHNDLEEVGPSPRHHTFFEMLGNFSFGDYFKAEAIPMAWELLTKV-F 120
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP++RL+FT F G D+ +P D+E +W+ G + + + G K NFW M GPCG
Sbjct: 121 DLPVERLWFTVFEGDDE--VPPDDEAAQLWVAAGADPERVLRFGRKDNFWVMADAGPCGP 178
Query: 191 SSEIHYDMKGEPSSALAR-VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
SEI + + A+ VN+D + +EIWN VF+ +R T+ PL + +DTG+G
Sbjct: 179 CSEITIFIGDDLKEMSAKGVNSDDPNYVEIWNNVFMQFER---STMQPLHRPSVDTGMGL 235
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGA-KPYGRTFTTSNRTDLDTSYRMLSDYSR 308
ER+ ++Q STYDTDLF+PL+E + GA +P R +R ++D+SR
Sbjct: 236 ERMAMVMQGVHSTYDTDLFIPLIERQLALLGADEPTYRAHVAP--------FRAVADHSR 287
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
+ +AD + P T + LR ++R A+ V K + +++ + E +G VYP
Sbjct: 288 AVAFLIADGVLPGNTGRSYVLRRILRRAVYQGRTVGFEK--PFLADVAAVVIEQMGAVYP 345
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E+++ + I + E R F LR L GV L
Sbjct: 346 ELRERADFILETVDLEERQF--LRT--------------------------LSGGVSILK 377
Query: 426 KQLARDPSI--TEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
+ R ++ T I GD AFTL DTYG ++ Q++AA LT+ +E+++ E + R
Sbjct: 378 SVIERVRAVGGTVIPGDDAFTLKDTYGFPLDLTQKIAAEHGLTVDEAGYERRMEEQRARG 437
Query: 484 KAKA-------ASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
+ A A DIDL + Y S T L IV
Sbjct: 438 RRAAQFKRAADAEAWADIDLPPTRF-----------TGYLGVSGSGTVQAL------IVA 480
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
GDQV A +G + + D T YA +GGQI D GV
Sbjct: 481 GDQVA--------EAVAGQQVQ-----------IALDSTPFYAESGGQIGDTGV-----L 516
Query: 597 TQENGKVEIGELAS-LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
G+ I ++ + G IVH+G VV + T +VD+ R MR+HT +HLL
Sbjct: 517 IGPRGRARIDDVQRPVPGVIVHYG-VVEEGAIAVYETVEAQVDSVRRAAIMRSHTATHLL 575
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
+ ALR VL Q V D DF+ + ++ + + +E+ +N I V +
Sbjct: 576 HRALRDVLGEHAAQAGSLVAPDRLRFDFT-HTRPVTPEQLREIERRVNAWIRADTPVAWQ 634
Query: 715 HMRASELPFLTHL----TVIPGEIYPDDVILID--------------ISDKE----NVIS 752
ELP+ L + GE Y D V ++ I++++ + S
Sbjct: 635 -----ELPYQAALEAGAIALFGEKYGDVVRMVTIGCVNGNDALSPAAIAERQRAGFRMCS 689
Query: 753 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
RE C GTHV +G I ++ S GVR I+ LTG ++ V+
Sbjct: 690 RELCGGTHVGRSGEIGLFRIVSESSVAAGVRRIEALTGAEAEQWVD 735
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F NSGM QFK+ FLGL PY R +QKC+RV GKHNDL G HHT
Sbjct: 31 IPGNDPTLLFTNSGMVQFKDTFLGLEQRPYTRATTAQKCLRVSGKHNDLEEVGPSPRHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K +A MA E LTK LP++RL+FT
Sbjct: 91 FFEMLGNFSFGDYFKAEAIPMAWELLTK-VFDLPVERLWFT 130
>gi|383120331|ref|ZP_09941060.1| alanyl-tRNA synthetase [Bacteroides sp. 1_1_6]
gi|251840627|gb|EES68709.1| alanyl-tRNA synthetase [Bacteroides sp. 1_1_6]
Length = 872
Score = 355 bits (910), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 264/793 (33%), Positives = 384/793 (48%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF ++F T+GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKEIRDSFKNFF-ETKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYHR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVE-VLK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D+E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLSRDDEAASYW-EQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P+L+ I +SG + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGTE-YGKD------KQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ + KQ + K L I + +GD
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLEQKQSFMYKLLPVLI-DNMGD 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ ++ EE F LR L G++
Sbjct: 349 AYPELIAQKGLIEKVIKEEEEAF--LRT--------------------------LETGIR 380
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K + + TEISG AFTLYDT+G ++ + + +T+ E F ++ + K
Sbjct: 381 LLDKTMGDTKAAGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNIEEFNTEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA + D + L+ T + YDY Y+ + RY
Sbjct: 441 QRARNAAA--IETGDWVTLREG--TTEFVGYDYTEYEASILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
I+ ++ ++ D T YA +GGQ+ D GV E
Sbjct: 481 -------------------QIKQKNQTLYQIVLDCTPFYAESGGQVGDTGV-----LVSE 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + P + VD R C H+ +HLL++AL
Sbjct: 517 FETIEVIDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDSAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHIEQKGSLVTPDSLRFDFSHF-QKVTDEEIRQVEHLVNAKIRANIPLKEYRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y + V +I S E C G HV TG+I +I S
Sbjct: 633 IEEAKELGAIALF-GEKYGERVRVIQFGS-----SIEFCGGIHVAATGNIGMVKIISESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYHRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E+L + + L + LY T
Sbjct: 93 LGNWSFGDYFKKEAINWAWEYLVE-VLKLNPEHLYAT 128
>gi|83775369|dbj|BAE65489.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391864417|gb|EIT73713.1| Alanyl-tRNA synthetase [Aspergillus oryzae 3.042]
Length = 939
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 235/732 (32%), Positives = 366/732 (50%), Gaps = 86/732 (11%)
Query: 87 DLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSD 146
DL G+DSYHHTFFEMLGNWSF DY+K++A + E +TK L RLY TYF GS
Sbjct: 73 DLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAINYSWELMTKI-YGLDPQRLYVTYFEGSK 131
Query: 147 QYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHYD-MKGEPSSA 205
+ GL D E +++W +GVP DHI MK NFWEMG GPCG SEIHYD + G +S
Sbjct: 132 EGGLSPDLEAKELWKAVGVPEDHILPGNMKDNFWEMGDQGPCGPCSEIHYDRIGGRNASN 191
Query: 206 LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDT 265
L VN D +++EIWN VFI + R S ++ PL ++DTG+GFERLV++LQNK+S YDT
Sbjct: 192 L--VNQDDPNVLEIWNNVFIQYNRESDRSLKPLPNKHVDTGMGFERLVSVLQNKSSNYDT 249
Query: 266 DLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK 325
D+F PL +TI+ ++GA+PY F + +DT+YR+++D+ R +T A++D + P+ +
Sbjct: 250 DVFSPLFQTIKDITGARPYQGRFGVEDADGIDTAYRVVADHVRTLTFAISDGVAPNNEGR 309
Query: 326 ---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEES 382
+R V+R + F+V+ G ++ + + +GD++PE++ + IL EE
Sbjct: 310 GYVIRRVLRRGARYARKYFRVEIGNFFSKIVPTLVDQMGDMFPEVKRKQQDVMEILDEEE 369
Query: 383 RIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMA 442
F K L + + + E + Q A+ ++ G
Sbjct: 370 ISFA----------KTLDRGERQFEHY----------------AQQAKAKGDDKLHGADV 403
Query: 443 FTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA--KAASNVPDIDLMDLK 500
+ LYDT+G ++ + +A + L + FE+ + KE SK KAA++ +D+ DL
Sbjct: 404 WRLYDTFGFPVDLTRIMAEERGLRIDDTEFEEARSRAKEASKGQKKAAADTVKLDVHDLG 463
Query: 501 HF------PVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSG 554
P T+D K+D N+ V AI H +S
Sbjct: 464 KLEKMNDVPKTNDSAKFDR---------------GNITAQV----------KAIYHGKS- 497
Query: 555 ASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGK 614
+ + Q+ +GLI D+TN YA GGQ +D G + + +E+G++ G
Sbjct: 498 FHLSTEQIPEGDQLGLILDRTNFYAEQGGQENDTGRIVIDGQAE----LEVGDVQLYAGY 553
Query: 615 IVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRV 673
++H G + ++ G E D R HT +H+LN AL+ VL QK V
Sbjct: 554 VLHTG-FMKYGSLSVGDEVICEYDELRRWPIRNNHTGTHILNFALKEVLGDGVEQKGSLV 612
Query: 674 FSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGE 733
+++ DFS + ++ + +E + I V + + + ++ + + GE
Sbjct: 613 AAEKLRFDFS-HKSPVTDKDLERIEDISTEYIRQNCAVYSQEVPLATARQISGVRAVFGE 671
Query: 734 IYPDDV-----------ILIDISD-KENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
YPD V IL ++ D + +S E C GTHV TG I+ ++ G
Sbjct: 672 TYPDPVRVVSVGVELEEILKNVKDPRWEKVSIEFCGGTHVQKTGDIKELVILEESGIAKG 731
Query: 782 VRSIKCLTGDSS 793
+R I +TG+ +
Sbjct: 732 IRRIIAVTGEDA 743
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 865 DLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
DL G+DSYHHTFFEMLGNWSF DY+K++A + E +TK L RLY T+
Sbjct: 73 DLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAINYSWELMTK-IYGLDPQRLYVTY 126
>gi|126737803|ref|ZP_01753533.1| alanyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
gi|126721196|gb|EBA17900.1| alanyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
Length = 883
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 252/806 (31%), Positives = 382/806 (47%), Gaps = 119/806 (14%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FL+YF QGH +V SSP+VP D ++ F NSGM QFKN F G+ Y R SQ
Sbjct: 7 IRSTFLNYFAK-QGHEVVASSPLVPRNDPTLMFTNSGMVQFKNCFTGVETRDYKRATTSQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K +A A E +TK V +P +R
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKNEAIPFAWELITKELV-VPKER 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHY 196
LY T + D+E +IW ++GVP D I + NFW+MG TGPCG +EI Y
Sbjct: 125 LYTTVY--------HTDDEAFEIWRKIGVPEDRIIRIATSDNFWQMGDTGPCGPCTEIFY 176
Query: 197 D-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
D G P S D + IEIWN+VF+ +++ + +++ L IDTG+G ER
Sbjct: 177 DHGDHIWGGPPGSP----EEDGDRFIEIWNLVFMQNEKFADGSMIDLEMQSIDTGMGLER 232
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
+ +LQ Y+TDLF L+E V+ P+G D + +R+++D+ R +
Sbjct: 233 IAALLQGTHDNYETDLFKSLIEASADVTSTDPFG---------DQNVHHRVIADHLRSCS 283
Query: 312 VALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+A+ + P + LR ++R A LL ++D ++ +L + + +G
Sbjct: 284 FLIAEGVLPSNEGRGYVLRRIMRRAMRHASLLGAKD-------PVMHKLVPALVQKMGAA 336
Query: 364 YPEIQDSINKIQLIL-GEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ EE+R L + G+K
Sbjct: 337 YPELGQGQALIEETFEQEETRFLKTLDR-----------------------------GLK 367
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L A +SG+ AF LYDTYG ++ Q+ AK++ + + F+ + E KE+
Sbjct: 368 LLDDASADMDKGDTLSGETAFKLYDTYGFPLDLTQDALRAKEIEVDTQGFDAAMKEQKEK 427
Query: 483 SKAKAASNVPDIDLMDLK-HFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQV 540
S+A + + D+K +F + D ++ Y+T + + IV
Sbjct: 428 SRA---GGIGLGEAADVKVYFDILDASGPTEFLGYETEKA-------EGQIAAIV----- 472
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
+ GA ++S V +I ++T Y +GGQ+ D GV T E
Sbjct: 473 -----------KDGAKVESAG--RGETVQIILNQTPFYGESGGQVGDSGV-----LTVEG 514
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
G + + +EG +H V ++ GL + +EVD + R H+ +HLL+ ALR
Sbjct: 515 GTAVVSDTKKVEGLFLHIAEVTEG-QIAVGLGAAMEVDHKRRSQIRANHSATHLLHEALR 573
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
L QK D DFS + + +S + V +ND I +V R M
Sbjct: 574 NALGEHVAQKGSLNADDRLRFDFS-HNKAMSAGELVKVGAEVNDFIRQNTEVTTRIMTPD 632
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKE-------NVISREPCCGTHVFNTGHIESCTV 772
+ L + GE Y ++V ++ + E S E C GTHV TG I + +
Sbjct: 633 DARDLGAQALF-GEKYGEEVRVVSMGKAETGKGHDGQTYSIELCGGTHVKQTGDIGTFVI 691
Query: 773 IGYKSYNHGVRSIKCLTGDSSKAAVE 798
+G + + GVR I+ LTG ++ A +E
Sbjct: 692 LGDSASSAGVRRIEALTGAAAYAYLE 717
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFKN F G+ Y R SQKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFTNSGMVQFKNCFTGVETRDYKRATTSQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K +A A E +TK V +P +RLY T
Sbjct: 89 FFEMLGNFSFGDYFKNEAIPFAWELITKELV-VPKERLYTT 128
>gi|376296385|ref|YP_005167615.1| alanyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
gi|323458946|gb|EGB14811.1| alanyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
Length = 879
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 243/810 (30%), Positives = 381/810 (47%), Gaps = 100/810 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL+YF GHT+V+SSP+ P D S+ F N+GM QFK +FLG Y R
Sbjct: 1 MKANEIRQRFLEYF-ERNGHTIVESSPLTPKDDPSLLFTNAGMVQFKKLFLGQEKRDYIR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+QKC+RVGGKHNDL GR + HHTFFEMLGN+SF DY+K DA R +FLT+ +
Sbjct: 60 ATTAQKCLRVGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKEDAIRFCWQFLTE-ELK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGY 190
L RLY T + D+ G ++W ++ GVP + I + G K NFW MG TGPCG
Sbjct: 119 LDKSRLYITIYKDDDEAG--------ELWRKVAGVPEERIYRLGEKDNFWSMGDTGPCGP 170
Query: 191 SSEIHYDMKGE----PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SE+HYD E P+ + + + DR +EIWN+VF+ + + T L + IDTG
Sbjct: 171 CSEVHYDQGEEVGCGPNCGIGKCDCDR--FLEIWNLVFMQYDQAEDGTRTNLPRPSIDTG 228
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ER+ ++Q S Y+TDLF +++ ++G K ++DT+ ++++D+
Sbjct: 229 MGLERIAAVVQGVHSNYETDLFQSIIKYTADLAGVK-------YRESEEIDTALQVIADH 281
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
SR I + D + P + LR ++R A + G + + + + + +G
Sbjct: 282 SRAIAFLIPDQVLPSNEGRGYILRRLIRRAYRFGK--LMGLTGTFLWKTASKVIDDMGGH 339
Query: 364 YPEIQDSIN-KIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
Y E++++ N ++++ GEE L K +
Sbjct: 340 YKELEETRNFMVEVVRGEEESFAKTLDKGLE---------------------------ML 372
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+ + G+ F LYDTYG +I++++A + + + F++ + E K+R
Sbjct: 373 EEELAELKKAGAAIVPGETTFKLYDTYGFPIDIVRDVAEQQGMGVDEAEFDKFMQEQKQR 432
Query: 483 SKAK-AASNVPDID--LMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
SKA S D+ L VT + Y+ D ++ Y
Sbjct: 433 SKAAWKGSGEKDVASVFQTLLEQDVTSEFSGYETMADQSAIAYVL--------------- 477
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
G +D ++ + W L+ + T Y +GGQ+ D G
Sbjct: 478 -----------TPEGEVVDELKAGESGW--LVAEVTPFYGESGGQVGDTGA-----IAAR 519
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
NGK ++ + + VVS + PG + + VD RL MR HT++HLL+AAL
Sbjct: 520 NGKADVLDTVKPSKNLTAHKIVVSEGVLKPGDAAFLNVDRSQRLATMRNHTSTHLLHAAL 579
Query: 660 RRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
++VL Q V D DF+ + + LS + +A VEK +N I + V R M +
Sbjct: 580 QKVLGDHAKQAGSLVGPDRLRFDFT-HIKGLSPEEIAEVEKLVNQAIFEAIPVTREVM-S 637
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
E T + GE Y D V +I++ +S E C GTH+ NTG S +
Sbjct: 638 IEAAQAKGATALFGEKYGDTVSVIEVPG----VSMEFCGGTHLDNTGIAGSFVITSESGV 693
Query: 779 NHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
G+R I+ TG ++ A + + ++ A
Sbjct: 694 AAGIRRIEAATGHNAVAWLNERREAASEAG 723
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTF 878
P D S+ F N+GM QFK +FLG Y R +QKC+RVGGKHNDL GR + HHTF
Sbjct: 29 PKDDPSLLFTNAGMVQFKKLFLGQEKRDYIRATTAQKCLRVGGKHNDLENVGRTARHHTF 88
Query: 879 FEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FEMLGN+SF DY+K DA R +FLT+ + L RLY T
Sbjct: 89 FEMLGNFSFGDYFKEDAIRFCWQFLTE-ELKLDKSRLYITI 128
>gi|408490188|ref|YP_006866557.1| alanyl-tRNA synthetase AlaS [Psychroflexus torquis ATCC 700755]
gi|408467463|gb|AFU67807.1| alanyl-tRNA synthetase AlaS [Psychroflexus torquis ATCC 700755]
Length = 872
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 260/800 (32%), Positives = 379/800 (47%), Gaps = 115/800 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S +R FL++F ++ HT+V S+PIV D ++ F+N+GM QFK FLG + R
Sbjct: 1 MKSTLLRRQFLEFF-KSKSHTIVNSAPIVLKDDPTLMFINAGMNQFKPYFLGNSIPKETR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V +SQKC+RV GKHNDL G+D+YHHT FEMLGNWSF DY+K++A A EFLT +
Sbjct: 60 VTDSQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKKEAIDWAWEFLT-DVLE 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ D LY T F G GL D E D+W L V D I K NFWEMG GPCG +
Sbjct: 119 ISKDNLYVTIFEGDKVDGLQKDSEAYDLWKTL-VKEDKILLGDKKDNFWEMGDQGPCGPA 177
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + A VN D ++EIWN+VFI + R + ++ L +IDTG+
Sbjct: 178 SEIHVDLRSKEEKAKIPGKDLVNRDHPQVVEIWNLVFIQYNRKADGSLESLPAKHIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL ++Q KTS YDTD+F PL+ IE ++G YG+T D D + R++SD+
Sbjct: 238 GFERLCMVVQGKTSNYDTDVFTPLIREIETITGT-TYGKT------EDTDIAIRVISDHI 290
Query: 308 RMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL----GDV 363
R +T A+AD P T V +L + + Y + E+L GD
Sbjct: 291 RAVTFAIADGQLPSNTGA--GYVIRRILRRAIRYGFTFLNIQTPFIYKLVEVLSKQMGDA 348
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE+ N + ++ EE + F +KT LEQ GL
Sbjct: 349 FPELISQKNLCENVIHEEEKSF--------------LKT---LEQ-------GL-----G 379
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + + S ISG AF LYDT+G ++ + + K L + FE +L + K+RS
Sbjct: 380 LLDSIVNESSSKIISGQKAFELYDTFGFPIDLTTLILSEKGYALDQKGFEVQLQKQKQRS 439
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
KA A ++ D ++ TDD+ ++ + DT + I
Sbjct: 440 KAAAQTSSSDWVVLK------TDDQGEFIGYDDTEAD--------------------VSI 473
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTN 595
K+ R S + Q L+F+ T Y GGQ+ D G ++ +
Sbjct: 474 TKY--RKVTSKKEGELYQ--------LVFNLTPFYPEGGGQVGDKGYLETPNGDTVFVID 523
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T +EN +I+H + S + VD R HT +HLL
Sbjct: 524 TKKEN------------NQIIH---ITKSLPKDLQKDFKAVVDLSQRQRTASNHTATHLL 568
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
+ ALR +L T QK V S DFS Y + L+ + + A+E ++N I + +
Sbjct: 569 HQALRSILGTHVEQKGSMVHSGYLRFDFSHYSK-LTQEELQAIEDFVNARIKENLTFEEE 627
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
++ + GE Y D V + + S+E C GTHV NT + +
Sbjct: 628 RTIPYDVAIDKGAIALFGEKYGDTVRFVKFGN-----SKELCGGTHVENTSKLWHFIINN 682
Query: 775 YKSYNHGVRSIKCLTGDSSK 794
S G+R I+ +T D++K
Sbjct: 683 EASVASGIRRIEAITSDAAK 702
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 812 ILNVGNIPYGDD-SIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAG 870
I+N I DD ++ F+N+GM QFK FLG + RV +SQKC+RV GKHNDL G
Sbjct: 21 IVNSAPIVLKDDPTLMFINAGMNQFKPYFLGNSIPKETRVTDSQKCLRVSGKHNDLEEVG 80
Query: 871 RDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
+D+YHHT FEMLGNWSF DY+K++A A EFLT + + D LY T
Sbjct: 81 KDTYHHTMFEMLGNWSFGDYFKKEAIDWAWEFLT-DVLEISKDNLYVT 127
>gi|304310760|ref|YP_003810358.1| alanyl-tRNA synthetase [gamma proteobacterium HdN1]
gi|301796493|emb|CBL44701.1| Alanyl-tRNA synthetase [gamma proteobacterium HdN1]
Length = 876
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 258/807 (31%), Positives = 384/807 (47%), Gaps = 117/807 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR +FLDYF GH +V SS ++P D ++ F N+GM QFK+VFLG Y R
Sbjct: 1 MKTSEIRKAFLDYFA-VNGHQIVPSSSLIPGNDPTLLFTNAGMVQFKDVFLGRDARDYRR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA R A EFLT +
Sbjct: 60 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKPDAIRFAWEFLTGERWL 119
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEM 182
LP ++L+ T + D+E DIW ++GVP D + + G NFW+M
Sbjct: 120 KLPKEKLWVTVY--------ATDDEAYDIWTQQVGVPVDRVVRIGDNKGAPYASDNFWQM 171
Query: 183 GSTGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVP 237
G TGPCG +EI YD G P S + D + IEIWNIVF+ R T+ P
Sbjct: 172 GDTGPCGPCTEIFYDHGEEIFGGPPGSK----DEDGDRYIEIWNIVFMQFDRHPDGTLNP 227
Query: 238 LSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL- 296
L K +DTG+G ER+ +LQ+ S Y+ DLF LL+ + KV+GAK DL
Sbjct: 228 LPKPSVDTGMGLERIAAVLQHVHSNYEIDLFAHLLDAVAKVTGAK------------DLQ 275
Query: 297 DTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELS 353
D S R+++D+ R +AD + P + LR ++R A+ + Q +L
Sbjct: 276 DKSLRVVADHIRACAFLIADGVVPSNEGRGYVLRRIMRRAIRHGNKLG--AQEPFFYKLV 333
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+A +GD YPE LRK + K +++ E EQF
Sbjct: 334 AALAAEMGDAYPE---------------------LRKLQAQIEKTILQ---EEEQFARTL 369
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
+ GL + + LT +TEI GD+ F LYDTYG ++ ++A + L+L FE
Sbjct: 370 DQGLRILEQELTAH-----QLTEIPGDLVFKLYDTYGFPADLTADIARERDLSLDMGGFE 424
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
Q++ KERS+ + ++ +YH + T ++ G
Sbjct: 425 QRMAAQKERSQKSS--------------------QFAGNYHDALDISTQTVFSGYSDTSG 464
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
+ +F G + S+ +A V + D+T YA +GGQ+ D+G+
Sbjct: 465 QAKVEALFF----------QGKPVSSVSAGQDAIV--VLDQTPFYAESGGQVGDVGL--- 509
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
+ E+ + G +H G +VS +++ G EV+A +R H+ +H
Sbjct: 510 --IRKAGACFEVADTHKQGGAHLHHGVLVSG-QISVGDVVEAEVNAELRQAIRLNHSATH 566
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
LL+AALR+VL +QK V + DFS LS + +E+ +ND + ++
Sbjct: 567 LLHAALRQVLGEHVHQKGSMVTAGRLRFDFS-NPSALSPAELEQIERIVNDQVRGNSEII 625
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
M + + + GE Y D+V ++ + + S E C GTH TG I +
Sbjct: 626 TEIMPIDQARAKGAMALF-GEKYEDEVRVLTMG--TDCFSVELCGGTHARRTGDIGLFQL 682
Query: 773 IGYKSYNHGVRSIKCLTGDSSKAAVEN 799
I GVR I+ +TG ++ A + N
Sbjct: 683 ISEGGVAAGVRRIEAVTGAAALALITN 709
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 28 IPGNDPTLLFTNAGMVQFKDVFLGRDARDYRRATTSQRCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA R A EFLT + LP ++L+ T
Sbjct: 88 FFEMLGNFSFGDYFKPDAIRFAWEFLTGERWLKLPKEKLWVT 129
>gi|386320981|ref|YP_006017143.1| alanyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
gi|416111799|ref|ZP_11592896.1| alanyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
gi|315022567|gb|EFT35594.1| alanyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
gi|325335524|gb|ADZ11798.1| Alanyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
Length = 867
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 250/794 (31%), Positives = 380/794 (47%), Gaps = 99/794 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR +FLD+F ++ H +V S+PIV D ++ F NSGM QFK+ FLG PR
Sbjct: 1 MTSQQIRQAFLDFF-KSKEHLIVPSAPIVLKDDPTLMFSNSGMTQFKDYFLGYKTPKAPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF +Y+KR+A A E LT+
Sbjct: 60 IADTQKCLRVSGKHNDLDDVGRDTYHHTMFEMLGNWSFGNYFKREAIAFAWELLTEV-YK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F G L D+E + W + D I K NFWEMG +GPCG
Sbjct: 119 IPKENLYVTIFEGDATENLERDQEAYNCWKSY-IAEDRILNGNKKDNFWEMGESGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E S VN D +IE+WN+VF+ R + ++ L ++DTG+
Sbjct: 178 SEIHIDLRSEEEKSKVSGKDLVNQDHPQVIEVWNLVFMEFNRKADGSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F PL+ +E++S K G N D+ + R++ D+
Sbjct: 238 GFERLCMALQGKTSNYDTDVFTPLIAKVEQLSHKKYEG---LLDNEKDI--AIRVVVDHI 292
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++ A+AD P T +R ++R A+ S +K+ L EL + +G +
Sbjct: 293 RAVSFAIADGQLPSNTGAGYVIRRILRRAISYSYRFLDMKEAFLY-ELVAVLKNQMGAFF 351
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI+ + ++ EE F +KT E GLV +
Sbjct: 352 PEIEKQEKLVTEVIKEEENSF--------------LKTI----------EHGLVRLENII 387
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ L + + G F LYDTYG ++ + +A K LT+ + F++++ + K+RSK
Sbjct: 388 QETLKKGEKT--LPGAEVFELYDTYGFPADLSRIIAEEKGLTVDEKGFDEEMEKQKQRSK 445
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
+A V YD+ T + VG + I
Sbjct: 446 KSSAQKV-------------------YDW--------VTLKDETESFVGYDQLEHKVFIT 478
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
K+ + G + ++F++T YA GGQ+ D G Y+ + E G+ E
Sbjct: 479 KYRKLENKDG-----------VFYQVVFNQTPFYAEGGGQVGDKG--YIES---EEGQFE 522
Query: 605 IGELASLEGKIVHFGNV--VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
+ L+ K + N+ + P VD+R+R H+ +HLL+ ALR V
Sbjct: 523 V-----LDTKKENNLNISLIKDLPQAPEKEFTAVVDSRLRRNTQANHSATHLLHEALREV 577
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L T QK V +D DFS + + +S + +A VE+ +N I + + +
Sbjct: 578 LGTHVEQKGSFVGADYLRFDFSHFSK-MSDEEIALVEEKVNAKIKENISLQEYRNIPIQE 636
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
+ GE Y D+V +I S+E C GTH +T I ++ S G
Sbjct: 637 ALDKGAMALFGEKYGDNVRMIQFGS-----SKELCGGTHAKSTSEIGLFKIVSESSTAAG 691
Query: 782 VRSIKCLTGDSSKA 795
+R I+ ++ + + A
Sbjct: 692 IRRIEAISSEKANA 705
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK+ FLG PR+A++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFSNSGMTQFKDYFLGYKTPKAPRIADTQKCLRVSGKHNDLDDVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF +Y+KR+A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGNYFKREAIAFAWELLTE-VYKIPKENLYVT 127
>gi|390944174|ref|YP_006407935.1| alanyl-tRNA synthetase [Belliella baltica DSM 15883]
gi|390417602|gb|AFL85180.1| alanyl-tRNA synthetase [Belliella baltica DSM 15883]
Length = 874
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 256/794 (32%), Positives = 371/794 (46%), Gaps = 116/794 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K IRS+F+++F + Q H V SSPIV D ++ F N+GM QFK+ FLG A R
Sbjct: 1 MEAKKIRSTFIEFFQSKQ-HQFVPSSPIVVKNDPTLMFTNAGMNQFKDYFLGNEIAKATR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VANSQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 VANSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIEWAWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY + FGG GL D E ++W + + D I K NFWEMG TGPCG
Sbjct: 119 LPKDRLYVSVFGGDIADGLDQDSEAFELWKNI-ISEDRIIFGSKKDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGEP----SSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ S VN D +IEIWN+VF+ R+ ++ L ++DTG+
Sbjct: 178 SEIHVDLRSNEERSQESGFNLVNNDHPQVIEIWNLVFMQFNRIKDGSLKELPAKHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV +Q K+S YDTD+F+P +E +E SG K YG LD + R++ D+
Sbjct: 238 GFERLVRAIQQKSSNYDTDIFMPFIEVLEAKSG-KKYGEN------EQLDIAMRVIVDHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++AD P A +R ++R A+ F Q + EL +A G+++
Sbjct: 291 RAIAFSIADGQLPSNNKAGYVIRRILRRAVRYGY-TFLGFQKPFMFELMPLLATNFGEIF 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ + I ++ EE F LR L G+K L
Sbjct: 350 PEVASQQDFIAKVIQEEEASF--LRT--------------------------LENGLKIL 381
Query: 425 --TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
K S I G AF LYDT+G ++ +A +++ + F +++ + K R
Sbjct: 382 DQIKSDMESKSTKIIDGKTAFELYDTFGFPFDLTSLIARENGISVDEKGFAEEMEKQKTR 441
Query: 483 SKAKAASNVPD---------IDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
S++ A D ++ + H KY D R+
Sbjct: 442 SRSAAEQETGDWIMVADEEGVEFIGYDHLEAESQIIKYRQIKDKKGDRFQ---------- 491
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
L+ DKT YA +GGQ+ D G +L
Sbjct: 492 ------------------------------------LVLDKTPFYAESGGQVGDQG--WL 513
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
+ E+ ++++ + IVHF V +V+A R M HT +H
Sbjct: 514 RS---ESEQIKVLDTKKENDLIVHF---VDKLPTDTSAIFSAKVNAEKRRLTMNNHTATH 567
Query: 654 LLNAALRRVLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
LL +AL+ VL Q+ + ++E DF+ + + LS + + AVE +N I + +
Sbjct: 568 LLQSALKEVLGDHVQQKGSLVNEELLRFDFAHFSK-LSDEEINAVEAIVNAKIRENIVLQ 626
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
+ E T + GE Y + V +I D++ S E C GTHV +TG I +
Sbjct: 627 EQRNVPIEEAKKQGATALFGEKYGEFVRVITF-DRD--FSVELCGGTHVASTGQIGLFKI 683
Query: 773 IGYKSYNHGVRSIK 786
I S + GVR I+
Sbjct: 684 ISEGSISSGVRRIE 697
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ FLG A RVANSQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDYFLGNEIAKATRVANSQKCLRVSGKHNDLEEVGVDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ LP DRLY +
Sbjct: 92 LGNWSFGDYFKKEAIEWAWELLTE-VYKLPKDRLYVS 127
>gi|317122060|ref|YP_004102063.1| alanyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
gi|315592040|gb|ADU51336.1| alanyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
Length = 905
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 254/778 (32%), Positives = 378/778 (48%), Gaps = 102/778 (13%)
Query: 30 GHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCVRVGGKHNDLS 89
GHT+V SS ++P D ++ F N+GM QFK+VF G PY R +QKC+R GGKHNDL
Sbjct: 33 GHTIVPSSSLIPKDDPTLLFTNAGMVQFKDVFTGKEKVPYKRATTAQKCMRAGGKHNDLE 92
Query: 90 CAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYG 149
G+ + HHTFFEMLGN+SF DY+KRDA A FLT+ + LP +RL+ T +
Sbjct: 93 NVGKTARHHTFFEMLGNFSFGDYFKRDAIHFAWTFLTE-ELGLPKERLWATIY------- 144
Query: 150 LPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHYDMKGE------P 202
D+E +W E+ G+P I + G K NFW MG TGPCG SEI YD +GE
Sbjct: 145 -REDDEAFQLWQEVTGIPASRIVRLGEKDNFWAMGDTGPCGPCSEIVYD-RGEEFRCEAE 202
Query: 203 SSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTST 262
+ A+ + DR +EIWN+VF+ R + PL + IDTG+G ER+ +++Q S
Sbjct: 203 TCAIGACDCDR--WLEIWNLVFMQFNRDETGRMEPLPRPSIDTGMGLERIASVMQGVASN 260
Query: 263 YDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDA 322
+DTDLF PL+ +E+++G + + +R+++D++R T +A+ + P
Sbjct: 261 FDTDLFRPLIRAVEELTGRR--------YEEGEPGFPFRVIADHARACTFLIAEGVLPSN 312
Query: 323 TAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKI-QLIL 378
+ LR ++R A+ + +++ L + L + E++G YPE++ + + ++I
Sbjct: 313 EGRGHVLRRILRRAVRFGR-ILGIQEPFLYR-LVDTVGEVMGGAYPEVRQRADYVARVIR 370
Query: 379 GEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEIS 438
GEE R F L + G+ + + + + AR + I
Sbjct: 371 GEEERFFRTL-------------------------DQGMAILAEVIERARARGDGV--IR 403
Query: 439 GDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPD-IDLM 497
G+ AF LYDTYG ++ + A L + E FEQ + +R +A+AA V + D
Sbjct: 404 GEEAFVLYDTYGFPLDLTVDAAEEAGLRVDREGFEQAMA--VQRQRARAAREVAEGWDPG 461
Query: 498 DLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASI 557
+ D+ Y+ T L V GDQ + AR+G
Sbjct: 462 SPLALALADEPATVFTGYERLEDEGTVRLL-------VRGDQ-------PVERARAGEE- 506
Query: 558 DSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLE-GKIV 616
VG++ D+T YA GGQ+ D G +L ++E+ + L G+ +
Sbjct: 507 ----------VGVVLDRTPFYAERGGQVGDTG--WLEAP---GARLEVLDTQPLPGGRFL 551
Query: 617 HFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFS 675
H VV VT G + VDA R MR HT +HLL+AAL+RVL Q V
Sbjct: 552 HKARVVEG-TVTVGDRVQGRVDAARRAAIMRNHTATHLLHAALKRVLGDHVNQAGSLVAP 610
Query: 676 DECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIY 735
D DF+ + E + D + A+E IN VI V V R + + E + GE Y
Sbjct: 611 DRLRFDFTHF-EAPTPDQLRAIEDEINGVILAGVPV-RWYWTSLEEALEAGAMALFGEKY 668
Query: 736 PDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
+V ++ I D S E C GTHV +T I S GVR ++ +TG SS
Sbjct: 669 GREVRVVQIGD----YSLELCGGTHVASTSDIGLFKFTAEGSVAAGVRRVEAVTGWSS 722
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VF G PY R +QKC+R GGKHNDL G+ + HHT
Sbjct: 43 IPKDDPTLLFTNAGMVQFKDVFTGKEKVPYKRATTAQKCMRAGGKHNDLENVGKTARHHT 102
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+KRDA A FLT+ + LP +RL+ T
Sbjct: 103 FFEMLGNFSFGDYFKRDAIHFAWTFLTE-ELGLPKERLWATI 143
>gi|333380208|ref|ZP_08471903.1| alanyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
gi|332829293|gb|EGK01947.1| alanyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
Length = 872
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 248/792 (31%), Positives = 390/792 (49%), Gaps = 103/792 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ SK IR SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG P YPR
Sbjct: 2 MTSKEIRDSFKTFFA-SKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNAPIKYPR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+LT+ +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIEWAWEYLTE-VIK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY T F GS + GL D+E W E + +D I K NFWEMG TGPCG
Sbjct: 120 LDKDRLYVTVFEGSPEEGLLRDDEAAGYW-EQYLSKDRIINGNKKDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ AL VN +IEIWN+VF+ R + ++ PL IDTG+
Sbjct: 179 SEIHIDLRPNEERAKVDALTLVNESHPQVIEIWNLVFMQFNRKADKSLEPLPAKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +Q K S YDTD+F +++ I +++G+ YG+ D + R+++D+
Sbjct: 239 GFERLCMAVQGKISNYDTDVFQTIIKAIGELTGS-AYGQN------EKQDIAMRVIADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++ D P A +R ++R A+ F + + L + E +G Y
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGY-TFLDQHKAFMYRLIPALIETMGGAY 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ I + LI ++ + L G+K L
Sbjct: 351 PEL---IQQQTLIEKVIKEEEESFLRT-------------------------LDTGIKLL 382
Query: 425 TKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
KQ++ + + TE++G AFTLYDT+G ++ + + +T+ ++ F+ ++ + K+R
Sbjct: 383 DKQISETKAKNGTELNGTDAFTLYDTFGFPLDLTELILRENGMTVDNDGFKAEMQKQKDR 442
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
++ AA D ++ D Y F +T +
Sbjct: 443 ARNAAAVETGDWVVLK---------------EGDPEFFGYDFTECETEI----------- 476
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
+R+ + ++ ++ + ++ ++T YA GGQ+ D G +L + ++ K
Sbjct: 477 -----LRYRK-------VKQKNQEFYQIVLNRTPFYAEMGGQVGDSG--WLIH---DDEK 519
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
+EI + VH + + VT +R+ R C HT +HLL+ LR +
Sbjct: 520 IEITDTKRENNLAVHLSSKLPE-DVTATFIARINTKNRTATEC--NHTATHLLHEGLREI 576
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD-RRHMRASE 720
L + QK V DFS + + L+ + VE+++ I + +D +RH+ SE
Sbjct: 577 LGSHVEQKGSYVSPGVLRFDFSHF-QKLTDKEIRKVERFVTAKIRENIALDEKRHVPISE 635
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+ + + GE Y DDV +I D S E C GTH+ +TG I S ++ S
Sbjct: 636 AKAMGAMALF-GEKYGDDVRVIRFGD-----SVELCGGTHISSTGRIGSFRIVNESSIAA 689
Query: 781 GVRSIKCLTGDS 792
G+R I+ +T ++
Sbjct: 690 GIRRIEAITAEA 701
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG P YPRVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNAPIKYPRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E+LT+ + L DRLY T
Sbjct: 93 LGNWSFGDYFKKEAIEWAWEYLTE-VIKLDKDRLYVT 128
>gi|126663290|ref|ZP_01734288.1| alanine--tRNA ligase (alanyl-tRNA synthetase) [Flavobacteria
bacterium BAL38]
gi|126624948|gb|EAZ95638.1| alanine--tRNA ligase (alanyl-tRNA synthetase) [Flavobacteria
bacterium BAL38]
Length = 878
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 251/795 (31%), Positives = 379/795 (47%), Gaps = 97/795 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FL +F + GH +V S+PIV D ++ F NSGM QFK FLG PR
Sbjct: 1 MKSQDIRKQFLQFF-ESNGHLIVPSAPIVLKDDPTLMFNNSGMAQFKEYFLGNGNPKSPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A + LT+
Sbjct: 60 IADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEAINWAWQLLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY + F G+ +P D+E DIW EL + D I K NFWEMG GPCG
Sbjct: 119 IPKENLYVSVFEGNPDENVPFDQEAWDIWKEL-ISEDRIILGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E AL VN D ++EIWN VF+ R + ++ L ++DTG+
Sbjct: 178 SEIHVDLRTEAEKALVSGKSLVNNDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTT----SNRTDLDTSYRML 303
GFERL LQ KTS YDTD+F PL+E +E+++G K N+T++ + R++
Sbjct: 238 GFERLCMALQGKTSNYDTDVFTPLIEKVEQITGLKYTSNEVKNISEEQNKTNI--AIRVI 295
Query: 304 SDYSRMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D+ R + A+AD P T + + + F + + +L +A +G
Sbjct: 296 VDHVRAVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLGTKEPFINKLVEVLANQMG 355
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
+ +PEI+ + ++ EE F LR LEQ G+
Sbjct: 356 EFFPEIKSQQQLVTNVIREEEASF--LRT---------------LEQ-----------GL 387
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
+ L +A + S E+SG AF LYDT+G ++ + K L F + E K
Sbjct: 388 QLLENVMA-ETSGKEVSGAKAFELYDTFGFPIDLTALILREKGYDLDEAGFNVAMQEQKA 446
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
RS+A + + D +++ P + + Y N + T
Sbjct: 447 RSRAASEVSTEDWNVL----IPGNVETF-VGYDQTANEVKIT------------------ 483
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
R + + D + + ++ D T Y GGQ+ D G N T
Sbjct: 484 -------RIRKVDSKKDGVLYQ------IVLDNTPFYPEGGGQVGDKGTLVSANET---- 526
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
++I + I+HF + + G ++V D +R + H+ +HL++ ALR
Sbjct: 527 -IDIIDTKKENNLILHFAKQLPE-NIEAGFVAKVNTD--LRTSTSKNHSATHLMHLALRT 582
Query: 662 VL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ-VDRRHMRAS 719
+L T QK V + DFS + + +S D + VE +N I Q+Q V+ R++
Sbjct: 583 ILGTHVEQKGSLVNPNYLRFDFSHFSK-VSDDELRQVEASVNAQIEAQLQLVEHRNIPIK 641
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
E + + GE Y D+V +I+ D S+E C G HV NT I +I +
Sbjct: 642 EALDKGAMALF-GEKYGDNVRMIEFGD-----SKELCGGIHVKNTAEIWHFKIISEGAVA 695
Query: 780 HGVRSIKCLTGDSSK 794
G+R I+ +TGD+ K
Sbjct: 696 AGIRRIEAITGDAVK 710
Score = 113 bits (283), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK FLG PR+A++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFNNSGMAQFKEYFLGNGNPKSPRIADTQKCLRVSGKHNDLEDVGFDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A + LT+ +P + LY +
Sbjct: 92 LGNWSFGDYFKKEAINWAWQLLTE-VYKIPKENLYVS 127
>gi|78187794|ref|YP_375837.1| alanyl-tRNA synthetase [Chlorobium luteolum DSM 273]
gi|123582508|sp|Q3B1I7.1|SYA_PELLD RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|78167696|gb|ABB24794.1| alanyl-tRNA synthetase [Chlorobium luteolum DSM 273]
Length = 887
Score = 353 bits (906), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 254/799 (31%), Positives = 389/799 (48%), Gaps = 105/799 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR SFLD+F + HT+V+S+P++P D ++ F N+GM QFK+VFL PY R
Sbjct: 1 MHSREIRQSFLDFFA-AKSHTIVRSAPVIPADDPTLLFTNAGMNQFKDVFLAKGTRPYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A++QKC+R GKHNDL GRD+YHHTFFEMLGNWSF DYYK +A A E LT+
Sbjct: 60 AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKEEAISWAWELLTE-VWK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLE-LGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP DRLY T + D+E+ IW E + HI + G K NFWEMG TGPCG
Sbjct: 119 LPADRLYATVYHD--------DDESARIWAEKTSIEPSHILRFGDKDNFWEMGETGPCGP 170
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIH D+ + S VNA + IE+WN+VFI + R + PL + ++DTG+GFE
Sbjct: 171 CSEIHIDLTPD-GSGKELVNAGDHRAIELWNLVFIQYDRQPDGRLEPLPQRHVDTGMGFE 229
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ ++Q+K S YDTD+FLPL + + +++G T+ S D + R+++D++R +
Sbjct: 230 RVCAVMQSKASNYDTDVFLPLFQRLSELTGV-----TYGASMDGRQDIAMRVIADHARTL 284
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVK---QGKLVKELSYNIAEILGDVYPEI 367
T AL+D P + + R V +L + G ++ +L +A+ +GDV+ E+
Sbjct: 285 TFALSDGAMP--SNEGRGYVLRRILRRALRYSRDLGCSGPILHQLVGTLADSMGDVFGEL 342
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+D + ++ I+ E F + +E F + G + L
Sbjct: 343 RDRRDAVERIIRAEEESF-------------ITTLDRGMEIFGELAAATARAGGRML--- 386
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
G+ AF LYDTYG ++ + LA L + E FE + E K R+++
Sbjct: 387 ----------KGEDAFKLYDTYGFPFDLTRLLATEAGLDVDGEGFEHCMQEQKSRARS-- 434
Query: 488 ASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT-NLVGIVIGDQVFCIDKH 546
D + T D + + ++S TF D + +IG H
Sbjct: 435 ----------DRREKQQTGDGAG-SWQWFSDSHATTFLGYDRLAMPSTIIG------AAH 477
Query: 547 AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG----VAYLTNT--TQEN 600
A H + L+ +T YA +GGQ D G AY T+++
Sbjct: 478 ASGH-----------------LLLVLAETPFYAESGGQTGDRGWLESAAYRMQVTDTRKD 520
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
G + ++ K+ + V+ +R R HT +HLL+AALR
Sbjct: 521 GDSFVHVVSRAFDKVRDTEIDPMDIVIEEATPVDASVERILRQETERNHTATHLLHAALR 580
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
R+L + QK V S+ DFS + + ++ + + AVE +N+ I V + +
Sbjct: 581 RILGSHVQQKGSFVTSERLRFDFSHFSK-MTPEEIQAVEAEVNEHIRCAAHVSKH----A 635
Query: 720 ELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+LP+ + G+ Y + V ++++ IS E C GTHV N G I +I
Sbjct: 636 DLPYDEAIAKGALAFFGDKYAERVRMVEVPG----ISAELCGGTHVDNIGQIGIFKIISE 691
Query: 776 KSYNHGVRSIKCLTGDSSK 794
S G+R I+ LTG +++
Sbjct: 692 SSAAAGIRRIEALTGRAAE 710
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 75/114 (65%), Gaps = 1/114 (0%)
Query: 805 TAASFSQILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHN 864
A S + + + IP D ++ F N+GM QFK+VFL PY R A++QKCIR GKHN
Sbjct: 15 AAKSHTIVRSAPVIPADDPTLLFTNAGMNQFKDVFLAKGTRPYTRAADTQKCIRASGKHN 74
Query: 865 DLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
DL GRD+YHHTFFEMLGNWSF DYYK +A A E LT+ LP DRLY T
Sbjct: 75 DLEDVGRDTYHHTFFEMLGNWSFGDYYKEEAISWAWELLTE-VWKLPADRLYAT 127
>gi|150004460|ref|YP_001299204.1| alanyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
gi|423312541|ref|ZP_17290478.1| alanyl-tRNA synthetase [Bacteroides vulgatus CL09T03C04]
gi|205829986|sp|A6L1L8.1|SYA_BACV8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|149932884|gb|ABR39582.1| alanyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
gi|392688229|gb|EIY81518.1| alanyl-tRNA synthetase [Bacteroides vulgatus CL09T03C04]
Length = 871
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 259/795 (32%), Positives = 381/795 (47%), Gaps = 113/795 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K IR SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 1 MTAKEIRDSFKSFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L
Sbjct: 60 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIGWAWEYLVDVLKI 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D LY T F GS + GL D E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 DPKD-LYATVFEGSPEEGLERDNEAASYWEQF-LPKDHILNGNKHDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGEPSSAL----ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D + E A VN D +IEIWN+VF+ R + ++ L IDTG+
Sbjct: 178 SEIHIDSRSEEEKAQIPGNQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV LQ KTS YDTD+F P+L+ I +++G T+ N+ D+ + R+++D+
Sbjct: 238 GFERLVRTLQGKTSNYDTDVFQPILKAIAEMAGT-----TYGQDNQKDI--AMRVIADHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++ D P A +R ++R A+ KQ + K L I E +G+ Y
Sbjct: 291 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-ENMGEAY 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ K L++ + E+ + + L G++ L
Sbjct: 350 PELNAQ--------------------------KTLIEKVIKEEEESFLRT--LETGIRLL 381
Query: 425 TKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
K + A+ EISG AFTLYDT+G ++ + + +T+ E F ++ + KER
Sbjct: 382 DKTMNDAKAAGKKEISGVDAFTLYDTFGFPLDLTELILRENGMTVNEEEFNAEMQKQKER 441
Query: 483 SKAKAASNVPDIDLMDLK----HFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIG 537
++ AA V D + +K HF YD+ Y+T+ RY
Sbjct: 442 ARNAAA--VETGDWITIKEGDTHF------VGYDFTEYETSILRYR-------------- 479
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
I+ ++ ++ T YA +GGQ+ D GV
Sbjct: 480 ---------------------QIKQKNQTLYQIVLSDTPFYAESGGQVGDTGV-----IV 513
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
E +EI + +H + P + VD R C H+ +HLL+
Sbjct: 514 SEFETIEIIDTKKENNLPIHITKKLPEHLDVPMMAC---VDTEKRAACAANHSCTHLLDE 570
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRH 715
ALR+VL T QK V + DFS + + ++ + + VE +N I + + + R+
Sbjct: 571 ALRQVLGTHVEQKGSLVTPESLRFDFSHF-QKVTDEQLREVEHLVNAKIRENIPLTEYRN 629
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ + L + + GE Y D+V ++ + S E C GTHV TG I +I
Sbjct: 630 LPIEKAKELGAIALF-GEKYGDEVRVVQFGN-----SIEFCGGTHVPATGKIGMVRIISE 683
Query: 776 KSYNHGVRSIKCLTG 790
S GVR I+ +TG
Sbjct: 684 SSVAAGVRRIEAITG 698
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 92 LGNWSFGDYFKKEAIGWAWEYL 113
>gi|294778219|ref|ZP_06743645.1| alanine--tRNA ligase [Bacteroides vulgatus PC510]
gi|294447847|gb|EFG16421.1| alanine--tRNA ligase [Bacteroides vulgatus PC510]
Length = 872
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 259/795 (32%), Positives = 381/795 (47%), Gaps = 113/795 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K IR SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 MTAKEIRDSFKSFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIGWAWEYLVDVLKI 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D LY T F GS + GL D E W + +P+DHI NFWEMG TGPCG
Sbjct: 121 DPKD-LYATVFEGSPEEGLERDNEAASYWEQF-LPKDHILNGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSAL----ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D + E A VN D +IEIWN+VF+ R + ++ L IDTG+
Sbjct: 179 SEIHIDSRSEEEKAQIPGNQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV LQ KTS YDTD+F P+L+ I +++G T+ N+ D+ + R+++D+
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPILKAIAEMAGT-----TYGQDNQKDI--AMRVIADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++ D P A +R ++R A+ KQ + K L I E +G+ Y
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-ENMGEAY 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ K L++ + E+ + + L G++ L
Sbjct: 351 PELNAQ--------------------------KTLIEKVIKEEEESFLRT--LETGIRLL 382
Query: 425 TKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
K + A+ EISG AFTLYDT+G ++ + + +T+ E F ++ + KER
Sbjct: 383 DKTMNDAKAAGKKEISGVDAFTLYDTFGFPLDLTELILRENGMTVNEEEFNAEMQKQKER 442
Query: 483 SKAKAASNVPDIDLMDLK----HFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIG 537
++ AA V D + +K HF YD+ Y+T+ RY
Sbjct: 443 ARNAAA--VETGDWITIKEGDTHF------VGYDFTEYETSILRYR-------------- 480
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
I+ ++ ++ T YA +GGQ+ D GV
Sbjct: 481 ---------------------QIKQKNQTLYQIVLSDTPFYAESGGQVGDTGV-----IV 514
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
E +EI + +H + P + VD R C H+ +HLL+
Sbjct: 515 SEFETIEIIDTKKENNLPIHITKKLPEHLDVPMMAC---VDTEKRAACAANHSCTHLLDE 571
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRH 715
ALR+VL T QK V + DFS + + ++ + + VE +N I + + + R+
Sbjct: 572 ALRQVLGTHVEQKGSLVTPESLRFDFSHF-QKVTDEQLREVEHLVNAKIRENIPLTEYRN 630
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ + L + + GE Y D+V ++ + S E C GTHV TG I +I
Sbjct: 631 LPIEKAKELGAIALF-GEKYGDEVRVVQFGN-----SIEFCGGTHVPATGKIGMVRIISE 684
Query: 776 KSYNHGVRSIKCLTG 790
S GVR I+ +TG
Sbjct: 685 SSVAAGVRRIEAITG 699
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAIGWAWEYL 114
>gi|296133407|ref|YP_003640654.1| alanyl-tRNA synthetase [Thermincola potens JR]
gi|296031985|gb|ADG82753.1| alanyl-tRNA synthetase [Thermincola potens JR]
Length = 884
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 254/802 (31%), Positives = 401/802 (50%), Gaps = 114/802 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ IR FL +F N +GHT++ SS +VP+ D ++ F N+GM QFK VFLGL PY R
Sbjct: 1 MTGNEIREKFLKFFEN-KGHTIIASSSLVPHDDPTLLFTNAGMNQFKEVFLGLDRRPYKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
SQKCVR GGKHNDL GR + HHTFFEMLGN+SF DY+KR+A A +FLT+ +
Sbjct: 60 ATTSQKCVRAGGKHNDLDTVGRTARHHTFFEMLGNFSFGDYFKREAITYAWQFLTEE-LG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP DRLY T + DEE +W E+ G+P + + + G K NFW MG TGPCG
Sbjct: 119 LPKDRLYATVY--------RDDEEAAQLWQEIAGLPPERVIRLGEKDNFWSMGDTGPCGP 170
Query: 191 SSEIHYDMKGEP------SSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
SE+ D +GE + A+ + DR +EIWN+VF+ + R + + PL K ID
Sbjct: 171 CSEVLID-RGEEFKCAADNCAIGACDCDR--WLEIWNLVFMQYNRDESGEMTPLPKPSID 227
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
TG+G ER+ +++Q S +DTDLF P++ +E++SG+ Y + + +R+++
Sbjct: 228 TGMGLERIASVMQKVNSNFDTDLFKPIMAKVEELSGSVYY--------QDERGFPFRVIA 279
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D++R T ++D + P + LR ++R A+ + V +++ L + + +A+++G
Sbjct: 280 DHARACTFLISDGVLPSNEGRGYVLRRILRRAVRFGK-VLGIEKPFLYQMVGV-VADLMG 337
Query: 362 DVYPEIQDSINKI-QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
D YPEI++ + Q+I EE R + L E LV +I+E+
Sbjct: 338 DAYPEIREKQTYVEQVIKIEEERFHETLH-----EGMRLVS--------DIVEK------ 378
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
VK +Q ISG AF LYDTYG ++ +++A LT+ + F + E
Sbjct: 379 VKAEGRQ--------SISGQEAFLLYDTYGFPLDLTEDIAEEHGLTVDKDGFAAAMEE-- 428
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
+R++A+AA + L + + K T Y+ N+V +++
Sbjct: 429 QRTRARAARQ-DEAMLAGQELYAEVGQKLGA-----TEFTGYSELETRANVVALIV---- 478
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAY 592
DK R+G ++ +I D+T Y +GGQ+ D G V
Sbjct: 479 ---DKEFRHEVRAGEQVE-----------VIMDRTCFYGESGGQVGDRGILESNRGAVIK 524
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+T+T + + + L ++E IV FG+V+ + VDAR R R H+ +
Sbjct: 525 VTDTKKTFNGLMV-HLGTVEKDIVSFGDVMDA-----------RVDARRRKQIARNHSVT 572
Query: 653 HLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL+ AL+ VL Q V + DF+ + ++ + + VE +N++I + V
Sbjct: 573 HLLHKALKEVLGDHVNQAGSLVEPERLRFDFTHF-RAVTPEELQKVEDRVNEMILANLDV 631
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
E L T + GE Y + V ++ + D S E C GTH+ +TG
Sbjct: 632 HAFETSLDEAKALG-ATALFGEKYGEKVRVVKMGD----YSMELCGGTHLRSTGEAGLFK 686
Query: 772 VIGYKSYNHGVRSIKCLTGDSS 793
++ G+R I+ +TG+ +
Sbjct: 687 ILSESGIGAGLRRIEAVTGEGT 708
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK VFLGL PY R SQKC+R GGKHNDL GR + HHT
Sbjct: 28 VPHDDPTLLFTNAGMNQFKEVFLGLDRRPYKRATTSQKCVRAGGKHNDLDTVGRTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KR+A A +FLT+ + LP DRLY T
Sbjct: 88 FFEMLGNFSFGDYFKREAITYAWQFLTE-ELGLPKDRLYAT 127
>gi|229496595|ref|ZP_04390309.1| alanyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
gi|229316492|gb|EEN82411.1| alanyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
Length = 873
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 246/794 (30%), Positives = 388/794 (48%), Gaps = 102/794 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR++F+ +F Q H +V S+P+V GD ++ F N+GM QFK++ LG A YPR
Sbjct: 1 MTANEIRAAFVAFFAEKQ-HHIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNVEAKYPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K +A A EFL + +
Sbjct: 60 IADAQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEEAISWAWEFLHER-LG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P DRLY T F G++ G D E W +P++ I K NFWEMG TGPCG
Sbjct: 119 IPADRLYATIFEGAESDGSERDNEAASYWGRF-LPQERILDGNKKDNFWEMGETGPCGPC 177
Query: 192 SEIHYDMKGEP----SSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + S VN D ++EIWN+VF+ + R++ ++ L IDTG+
Sbjct: 178 SEIHIDLRSDEERMQQSGRELVNRDHPQVVEIWNLVFMQYNRMADGSLSLLPHKVIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +Q K S YDTD+F PL+ + ++SG PYG+ ++ D + R+++D+
Sbjct: 238 GFERLCMAMQGKRSNYDTDVFQPLIGAVAQLSGI-PYGKEESS------DVAMRVVADHV 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I A+ D P A +R ++R A+ F ++ + L + E +G Y
Sbjct: 291 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGY-TFLGRREAFMYALLPTLIESMGGAY 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ IQ ++ EE F LR L G+K L
Sbjct: 350 PELIAQRELIQKVMREEEESF--LRT--------------------------LEAGIKLL 381
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
K++ + ++SG AF LYDT+G ++ + + +TL + F++++ E K R++
Sbjct: 382 DKKIEELGNKGQLSGHDAFVLYDTFGFPLDLTELILREHGMTLDQKGFDREMAEQKARAR 441
Query: 485 AKAASNVPD-IDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+ A D + L + + V D+ + D + RY
Sbjct: 442 SAAQLETDDWVTLAEGETLFVGYDQTE----ADCSILRY--------------------- 476
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
RH ++ ++ + ++ T YA GGQ+ D G+ +E +
Sbjct: 477 -----RH---------VKQKNKDFYQVVLSATPFYAEMGGQVGDSGIL----VDEEGMRY 518
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
I + VH ++ PG T R E+D R HT +HLL+ ALR VL
Sbjct: 519 AIVDTKRENNLPVH---LMPKLPNDPGQTFRAEIDQERRRMAEANHTATHLLHQALRMVL 575
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMRASEL 721
QK V + DFS Y + L+ + + VE+ + + A+ + + R++ +E
Sbjct: 576 GEHVEQKGSFVSPEVLRFDFSHYNK-LTPEEIRQVEELVTQAVRADYPREEHRNIPIAEA 634
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
+ + + GE Y ++V ++ S E C GTHV +TG I + ++ S G
Sbjct: 635 RAMGAMALF-GEKYGEEVRVMKYG-----TSIELCGGTHVPSTGMIGAFRIVSESSIAAG 688
Query: 782 VRSIKCLTGDSSKA 795
VR I+ +T +++A
Sbjct: 689 VRRIEAVTATNAEA 702
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++ LG A YPR+A++QKC+RV GKHNDL G D+YHHT FE
Sbjct: 31 GDPTLMFTNAGMNQFKDIILGNVEAKYPRIADAQKCLRVSGKHNDLEEVGHDTYHHTMFE 90
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
MLGNWSF DY+K +A A EFL + + +P DRLY T
Sbjct: 91 MLGNWSFGDYFKEEAISWAWEFLHE-RLGIPADRLYATI 128
>gi|298384931|ref|ZP_06994490.1| alanine--tRNA ligase [Bacteroides sp. 1_1_14]
gi|298262075|gb|EFI04940.1| alanine--tRNA ligase [Bacteroides sp. 1_1_14]
Length = 872
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 263/793 (33%), Positives = 383/793 (48%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKEIRDSFKNFF-ESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYHR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVE-VLK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D+E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLSRDDEAASYW-EQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P+L+ I +SG + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGTE-YGKD------KQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +GD
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQSFMYKLLPVLI-DNMGD 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ ++ EE F LR L G++
Sbjct: 349 AYPELIAQKGLIEKVIKEEEEAF--LRT--------------------------LETGIR 380
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K + + TEISG AFTLYDT+G ++ + + +T+ E F ++ + K
Sbjct: 381 LLDKTMGDTKAAGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNIEEFNTEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA + D + L+ T + YDY Y+ + RY
Sbjct: 441 QRARNAAA--IETGDWVTLREG--TTEFVGYDYTEYEASILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
I+ ++ ++ D T YA +GGQ+ D GV E
Sbjct: 481 -------------------QIKQKNQTLYQIVLDCTPFYAESGGQVGDTGV-----LVSE 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + P + VD R C H+ +HLL++AL
Sbjct: 517 FETIEVIDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDSAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGKHIEQKGSLVTPDSLRFDFSHF-QKVTDEEIRQVEHLVNAKIRANIPLKEYRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y + V +I S E C G HV TG+I +I S
Sbjct: 633 IEEAKELGAIALF-GEKYGERVRVIQFGS-----SIEFCGGIHVAATGNIGMVKIISESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYHRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E+L + + L + LY T
Sbjct: 93 LGNWSFGDYFKKEAINWAWEYLVE-VLKLNPEHLYAT 128
>gi|29349403|ref|NP_812906.1| alanyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
gi|41018213|sp|Q8A0M6.1|SYA_BACTN RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|29341312|gb|AAO79100.1| alanyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
Length = 872
Score = 353 bits (905), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 263/793 (33%), Positives = 383/793 (48%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKEIRDSFKNFF-ESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYHR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L + +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVE-VLK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D+E W E +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLSRDDEAASYW-EQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P+L+ I +SG + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGTE-YGKD------KQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +GD
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQSFMYKLLPVLI-DNMGD 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ ++ EE F LR L G++
Sbjct: 349 AYPELIAQKGLIEKVIKEEEEAF--LRT--------------------------LETGIR 380
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K + + TEISG AFTLYDT+G ++ + + +T+ E F ++ + K
Sbjct: 381 LLDKTMGDTKAAGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNIEEFNAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA + D + L+ T + YDY Y+ + RY
Sbjct: 441 QRARNAAA--IETGDWVTLREG--TTEFVGYDYTEYEASILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
I+ ++ ++ D T YA +GGQ+ D GV E
Sbjct: 481 -------------------QIKQKNQTLYQIVLDCTPFYAESGGQVGDTGV-----LVSE 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+E+ + +H + P + VD R C H+ +HLL++AL
Sbjct: 517 FETIEVIDTKKENNLPIHITKKLPEHPEAPMMAC---VDTDKRAACAANHSATHLLDSAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHIEQKGSLVTPDSLRFDFSHF-QKVTDEEIRQVEHLVNAKIRANIPLKEYRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y + V +I S E C G HV TG+I +I S
Sbjct: 633 IEEAKELGAIALF-GEKYGERVRVIQFGS-----SIEFCGGIHVAATGNIGMVKIISESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYHRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E+L + + L + LY T
Sbjct: 93 LGNWSFGDYFKKEAINWAWEYLVE-VLKLNPEHLYAT 128
>gi|347731618|ref|ZP_08864711.1| alanyl-tRNA synthetase [Desulfovibrio sp. A2]
gi|347519666|gb|EGY26818.1| alanyl-tRNA synthetase [Desulfovibrio sp. A2]
Length = 879
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 245/796 (30%), Positives = 388/796 (48%), Gaps = 108/796 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL++F +QGH +V+SS +VP D S+ F N+GM QFK +FLG Y R
Sbjct: 2 ITANEIRRRFLEFF-QSQGHEIVRSSSLVPKDDPSLLFTNAGMVQFKKIFLGQEKRAYVR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
SQKC+RVGGKHNDL GR + HHTFFEMLGN+SF DY+K DA + A +FLT+ +
Sbjct: 61 ATTSQKCLRVGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKEDAIKFAWKFLTE-DLK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RLY T F D+E RD+WL +P + I + G K NFW MG TGPCG
Sbjct: 120 LPKERLYATVF--------RDDDEARDLWLAHTDIPAERIYRMGEKDNFWSMGDTGPCGP 171
Query: 191 SSEIHYDMKGE-----PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI D +GE P+ + + + DR +EIWN+VF+ + + + T L K IDT
Sbjct: 172 CSEILID-QGEHMTCGPNCGIGKCDCDR--YLEIWNLVFMQYDQSADGTRTALPKPSIDT 228
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ + Q S +DTDLF +++ ++G + D DT+ R+++D
Sbjct: 229 GMGLERIAAVCQGVFSNFDTDLFQAIIQYTCGIAG-------VSYRADDDTDTALRVIAD 281
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+SR + + D + P + LR ++R A + + G + + + + E++GD
Sbjct: 282 HSRSMAFMITDGILPSNEGRGYVLRRLIRRAYRFGRLIGQT--GTFLHKTALKVVEVMGD 339
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ + + + ++ EE E+FN + GL +
Sbjct: 340 DYPELSGNADFMARVVREEE------------------------ERFNRTLDKGLA--LL 373
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+ R T ++GD+AF LYDTYG +I+ ++A + T+ + F + E KER
Sbjct: 374 EEELESLRGAGSTRVAGDVAFKLYDTYGFPLDIVNDIAEKRGFTVDEDGFRTLMAEQKER 433
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
+KA +K D S+ + L+ L IG +
Sbjct: 434 AKA----------------------AWKGSGESDIASRFHAL--LEEGLRSEFIGYEHLS 469
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV-------AYLTN 595
D + + + S L A ++ +T Y +GGQ D+G A + +
Sbjct: 470 GDSRVV-ALLDASGLPSEGLPKGAKGYVVTTRTPFYGASGGQAGDLGSIASPSGKARVLD 528
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T + + ++ + + +++G+++ P ++V+ R+ R HT +HLL
Sbjct: 529 TLKPSPELTVHHIETVDGELL------------PDQEVHLQVEEDERVASARNHTCTHLL 576
Query: 656 NAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
+AALRRVL Q V D DF+ + ++ + +AAVE+ +N VI + ++
Sbjct: 577 HAALRRVLGDHVKQAGSLVAPDRLRFDFT-HIAAMTPEEIAAVEREVNRVILADLPLETD 635
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
HM A + + GE Y D+V ++ I+D+ S E C GTH+ TG ++
Sbjct: 636 HM-AYDAALTRGAMALFGEKYGDEVRVVAIADE----SVELCGGTHLRATGQAGLFLILS 690
Query: 775 YKSYNHGVRSIKCLTG 790
GVR I+ +TG
Sbjct: 691 EGGVAAGVRRIEAVTG 706
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D S+ F N+GM QFK +FLG Y R SQKC+RVGGKHNDL GR + HHT
Sbjct: 29 VPKDDPSLLFTNAGMVQFKKIFLGQEKRAYVRATTSQKCLRVGGKHNDLENVGRTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A +FLT+ + LP +RLY T
Sbjct: 89 FFEMLGNFSFGDYFKEDAIKFAWKFLTE-DLKLPKERLYAT 128
>gi|298372626|ref|ZP_06982616.1| alanine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
gi|298275530|gb|EFI17081.1| alanine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
Length = 867
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 257/791 (32%), Positives = 391/791 (49%), Gaps = 102/791 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ SK R +FLD+F Q H +V S+P+V D ++ F N+GM QFKN+ LG P Y R
Sbjct: 1 MNSKETRKAFLDFFRGKQ-HKIVPSAPMVIKDDPTLMFTNAGMNQFKNIILGNDPIKYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A EFLT+ +
Sbjct: 60 VADTQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEFLTEV-IK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY T F GS + GL D+E +W E +P++ I K NFWEMG GPCG
Sbjct: 119 LDKDRLYVTVFEGSKEDGLSRDDEAAAMW-EQFLPKERIIDGNKKDNFWEMGDVGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + L VN +IEIWN+VF+ + R + ++ L IDTG+
Sbjct: 178 SEIHIDIRPQAERDAVDGLTLVNGSHPQVIEIWNLVFMQYDRKADGSLTSLPNKVIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ K+S YDTD+F P+++ I K+SG ++ +TD+ + R+++D+
Sbjct: 238 GFERLCMALQGKSSNYDTDIFQPIIQEIAKISGM-----SYRQDAKTDV--AMRVIADHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++AD P A +R ++R A+ F ++ + L + ++GD +
Sbjct: 291 RTIAFSIADGQLPSNAKAGYVIRRILRRAVRYGY-TFLGQREAFMYRLVPILCSVMGDNF 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
EI + I+ ++ EE F LR L G++ L
Sbjct: 350 TEIISQRDLIEKVIKEEEEAF--LRT--------------------------LETGIRLL 381
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
K + +SG++AFTLYDTYG ++ + + +T+ F+ ++ + KER++
Sbjct: 382 EKNMPTAKGGV-LSGEVAFTLYDTYGFPLDLTELILRENGMTVDVAEFDSEMKKQKERAR 440
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
A D + V D D+ VG DQ +C +
Sbjct: 441 NAATVETDD--------WVVVSDG-------------------DSLFVGY---DQ-YCTE 469
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK-V 603
IR+ + ++ ++ + L+ +T YA GGQ+ D G T E+G V
Sbjct: 470 TKIIRYRK-------VKQKNKEYYQLVLSQTPFYAEKGGQVGDRGKL----TGSEDGSLV 518
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
EI + + VH + + S V T+ E++ RL R HT +H+L+ ALR VL
Sbjct: 519 EIFDTKTENNLHVHLADKLPS-NVAQTFTA--EINTESRLATARNHTATHILHEALREVL 575
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR-RHMRASEL 721
QK V +D DFS + + ++ D + VE N I + ++ R + +E
Sbjct: 576 GKHVEQKGSYVCADNLRFDFSHF-QKMTDDEIRRVETIANRRIRDNYPLEEMRQLPIAEA 634
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
+ + + GE Y + V ++ S E C GTHV TG I ++ S G
Sbjct: 635 RAMGAIALF-GEKYGETVRVVKFGS-----SVELCGGTHVSRTGDIGMVKIVAESSVAAG 688
Query: 782 VRSIKCLTGDS 792
VR I+ +TG++
Sbjct: 689 VRRIEAITGEA 699
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFKN+ LG P Y RVA++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKNIILGNDPIKYTRVADTQKCLRVSGKHNDLEEVGHDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A EFLT+ + L DRLY T
Sbjct: 92 LGNWSFGDYFKKEAISWAWEFLTE-VIKLDKDRLYVT 127
>gi|440750581|ref|ZP_20929822.1| Alanyl-tRNA synthetase [Mariniradius saccharolyticus AK6]
gi|436480799|gb|ELP37011.1| Alanyl-tRNA synthetase [Mariniradius saccharolyticus AK6]
Length = 876
Score = 352 bits (904), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 263/799 (32%), Positives = 394/799 (49%), Gaps = 110/799 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K IR+ F+D+F ++GHT + SSPIV D ++ F N+GM QFK+ LG R
Sbjct: 1 MKAKDIRTQFIDFF-KSKGHTYIPSSPIVVKNDPTLMFTNAGMNQFKDYILGNETPKATR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VANSQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 VANSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIEWAWELLTEV-YK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY + FGG L D E +W ++ VP I K NFWEMG TGPCG
Sbjct: 119 LPKDRLYVSVFGGDAGDKLGKDMEAFQLWSQI-VPESRILFGNKKDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + VN D +IEIWN+VF+ R++ ++ L ++DTG+
Sbjct: 178 SEIHIDLRSDAERQQVEGYTLVNNDHPQVIEIWNLVFMQFNRLADGSLKELPAKHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV +Q K+S YD+D+F P ++ IEK SG K YG +D + R++ D+
Sbjct: 238 GFERLVRAIQAKSSNYDSDIFTPFIQFIEKKSG-KQYGLD------EKVDIAMRVIVDHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I+ ++AD P A +R ++R A+ + + EL +AE G+++
Sbjct: 291 RAISFSIADGQLPSNNKAGYVIRRILRRAVRYGYTFLGFHK-PFLYELLPLLAETFGEIF 349
Query: 365 PEI---QDSINKIQLILGEES---RIFDN-LRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
PE+ QD + K+ I+ EE R DN LRK L + + EL Q
Sbjct: 350 PELAAQQDFVAKV--IMEEEQSFLRTLDNGLRK--------LDQIKEELHQ--------- 390
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
+ + G +AF LYDTYG ++ +A ++ + F +++
Sbjct: 391 --------------SGKSVVDGKIAFELYDTYGFPLDLTSLIARENGFSVDEKGFAAEMD 436
Query: 478 ELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
K RS+A A D +++ + + YDY ++ S+ IV
Sbjct: 437 IQKNRSRAAAEQETGDWVIVNAEE---GVEFIGYDY-LESQSR-------------IVKY 479
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
Q+ DK R ++ D+T YA +GGQ+ D G +L N
Sbjct: 480 RQI--TDKKGDRFQ------------------IVLDRTPFYAESGGQVGDQG--WLINGA 517
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+ V++ + IVHF V T + +VDA R M H+ +HLL+A
Sbjct: 518 E---TVKVLDTKKENDLIVHF---VDKLPSQFDATFQSKVDAAKRKDSMNNHSATHLLHA 571
Query: 658 ALRRVLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRH 715
AL++VL Q+ + ++E DFS + + ++ + +A VE +N I + + ++R+
Sbjct: 572 ALKQVLGDHVQQKGSLVNEELLRFDFSHFSK-MTEEEIAQVESIVNAKIRENIALYEQRN 630
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ +E T + GE Y D V LI + S E C GTHV TG I ++
Sbjct: 631 VPIAEAK-KQGATALFGEKYGDFVRLITFDPQ---FSVELCGGTHVSATGVIGLFKIVSE 686
Query: 776 KSYNHGVRSIKCLTGDSSK 794
S GVR I+ +T +++
Sbjct: 687 SSIAAGVRRIEAITAKTAE 705
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ LG RVANSQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDYILGNETPKATRVANSQKCLRVSGKHNDLEEVGVDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ LP DRLY +
Sbjct: 92 LGNWSFGDYFKKEAIEWAWELLTE-VYKLPKDRLYVS 127
>gi|407451100|ref|YP_006722824.1| alanyl-tRNA synthetase [Riemerella anatipestifer RA-CH-1]
gi|403312084|gb|AFR34925.1| Alanyl-tRNA synthetase [Riemerella anatipestifer RA-CH-1]
Length = 867
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 249/794 (31%), Positives = 380/794 (47%), Gaps = 99/794 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR +FLD+F ++ H +V S+PIV D ++ F NSGM QFK+ FLG PR
Sbjct: 1 MTSQQIRQAFLDFF-KSKEHLIVPSAPIVLKDDPTLMFSNSGMTQFKDYFLGYKTPKAPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF +Y+K++A A E LT+
Sbjct: 60 IADTQKCLRVSGKHNDLDDVGRDTYHHTMFEMLGNWSFGNYFKKEAIAFAWELLTEV-YK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F G L D+E + W + D I K NFWEMG +GPCG
Sbjct: 119 IPKENLYVTIFEGDATENLERDQEAYNCWKSY-IAEDRILNGNKKDNFWEMGESGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E S VN D +IE+WN+VF+ R + ++ L ++DTG+
Sbjct: 178 SEIHIDLRSEEEKSKVSGKDLVNQDHPQVIEVWNLVFMEFNRKADGSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F PL+ +E++S K G N D+ + R++ D+
Sbjct: 238 GFERLCMALQGKTSNYDTDVFTPLIAKVEQLSHKKYEG---LLDNEKDI--AIRVVVDHI 292
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++ A+AD P T +R ++R A+ S +K+ L EL + +G +
Sbjct: 293 RAVSFAIADGQLPSNTGAGYVIRRILRRAISYSYRFLDMKEAFLY-ELVAVLKNQMGAFF 351
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI+ + ++ EE F +KT E GLV +
Sbjct: 352 PEIEKQEKLVTEVIKEEENSF--------------LKTI----------EHGLVRLENII 387
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ L + + G F LYDTYG ++ + +A K LT+ + F++++ + K+RSK
Sbjct: 388 QETLKKGEKT--LPGAEVFELYDTYGFPADLSRIIAEEKGLTVDEKGFDEEMEKQKQRSK 445
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
+A V YD+ T + VG + I
Sbjct: 446 KSSAQKV-------------------YDW--------VTLKDETESFVGYDQLEHKVFIT 478
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
K+ + G + ++F++T YA GGQ+ D G Y+ + E G+ E
Sbjct: 479 KYRKLENKDG-----------VFYQVVFNQTPFYAEGGGQVGDKG--YIES---EEGQFE 522
Query: 605 IGELASLEGKIVHFGNV--VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
+ L+ K + N+ + P VD+R+R H+ +HLL+ ALR V
Sbjct: 523 V-----LDTKKENNLNISLIKDLPQAPEKEFTAVVDSRLRRNTQANHSATHLLHEALREV 577
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L T QK V +D DFS + + +S + +A VE+ +N I + + +
Sbjct: 578 LGTHVEQKGSFVGADYLRFDFSHFSK-MSDEEIALVEEKVNAKIKENISLQEYRNIPIQE 636
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
+ GE Y D+V +I S+E C GTH +T I ++ S G
Sbjct: 637 ALDKGAMALFGEKYGDNVRMIQFGS-----SKELCGGTHAKSTSEIGLFKIVSESSTAAG 691
Query: 782 VRSIKCLTGDSSKA 795
+R I+ ++ + + A
Sbjct: 692 IRRIEAISSEKANA 705
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK+ FLG PR+A++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFSNSGMTQFKDYFLGYKTPKAPRIADTQKCLRVSGKHNDLDDVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF +Y+K++A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGNYFKKEAIAFAWELLTE-VYKIPKENLYVT 127
>gi|392549190|ref|ZP_10296327.1| alanyl-tRNA ligase [Pseudoalteromonas rubra ATCC 29570]
Length = 864
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 259/801 (32%), Positives = 380/801 (47%), Gaps = 117/801 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR SFLDYF Q H +V SS ++P D ++ F N+GM QFK+VFLG PY R
Sbjct: 1 MTTAQIRQSFLDYFAKQQ-HQVVPSSSLIPGNDATLLFTNAGMVQFKDVFLGGEKRPYNR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA R A EFLT+ +
Sbjct: 60 ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKDAIRFAWEFLTE-EIK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP D+L T + DEE DIW E+GVP D I + NFW MG TGPCG
Sbjct: 119 LPKDKLLVTVY--------HNDEEAYDIWSKEMGVPEDKIIRIATSDNFWSMGDTGPCGP 170
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI +D G P S D + IEIWN+VF+ + R + T+ PL K +DT
Sbjct: 171 CSEIFFDHGEEIWGGPPGSP----EEDGDRFIEIWNLVFMQYNRHADGTMEPLPKQSVDT 226
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-DTSYRMLS 304
G+G ER+ I+Q S Y+ DLF L+ KV+GA+ DL D S R+++
Sbjct: 227 GMGLERISAIMQGVHSNYEIDLFQALIAAAAKVTGAQ------------DLEDKSLRVIA 274
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D+ R +AD + P + LR ++R A+ + +G +L ++E +G
Sbjct: 275 DHIRSCAFLIADGVMPSNEGRGYVLRRIIRRAVRHGNKLG--AKGAFFHQLVSALSEQMG 332
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
+ YPE+ I+ +L RI E EQF + GL +
Sbjct: 333 EAYPELVKQGAIIEKVL----RI--------------------EEEQFGKTLDRGLAILE 368
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
++L L D I GD+ F LYDTYG ++ ++A + +T+ F++ + +
Sbjct: 369 EHLA-SLEGDV----IPGDVVFKLYDTYGFPADLTADVARERFMTIDERGFKECME--TQ 421
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT-FPCLD-TNLVGIVIGDQ 539
R A+ A K+ DY+ S++ + F D T+ G V+ +
Sbjct: 422 RKMAQQAG------------------KFGADYNEQLKSEKSSDFKGYDATHYTGTVV--E 461
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
+F + G S+ ++ N V + D+T YA +GGQ+ D G +
Sbjct: 462 LF----------KEGQSVSVLEEGDNGIV--VLDRTPFYAESGGQVGDTGSLKVA----- 504
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
G+ + + L I H G V V + +VDA R + HT +H+L+ AL
Sbjct: 505 AGEFVVTDTQKLGNAIAHHGRVTGRIGVND--KADAQVDAARREDIKKNHTATHILHEAL 562
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R+ L QK V +D+ DFS + E ++ + +E +N I ++ M
Sbjct: 563 RQALGEHVAQKGSLVMADKLRFDFSHF-EGVNKTQLRDIEDAVNAQIRTNFALNTELMDI 621
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ + GE Y D+V ++ I D S E C GTHV G I ++
Sbjct: 622 DAAKEKGAMALF-GEKYDDEVRVVSIGD----YSIELCGGTHVSRAGDIGLFKIVSEGGI 676
Query: 779 NHGVRSIKCLTGDSSKAAVEN 799
GVR I+ +TG + A V N
Sbjct: 677 AAGVRRIEAVTGAEAIAYVAN 697
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 28 IPGNDATLLFTNAGMVQFKDVFLGGEKRPYNRATSSQRCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K+DA R A EFLT+ + LP D+L T
Sbjct: 88 FFEMLGNFSFGDYFKKDAIRFAWEFLTE-EIKLPKDKLLVT 127
>gi|163781728|ref|ZP_02176728.1| alanyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882948|gb|EDP76452.1| alanyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
Length = 873
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 259/798 (32%), Positives = 393/798 (49%), Gaps = 124/798 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR FL +F +GHT VKS+P+VP D ++ FVN+GM FKNVFLG+ PY R
Sbjct: 3 LSAHEIRELFLSFF-ERKGHTRVKSAPLVPENDPTLLFVNAGMVPFKNVFLGVEKRPYTR 61
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ QKC+RV GKHNDL G S HHTFFEMLGN+SF DY+K A A EF+T +
Sbjct: 62 AVSCQKCLRVSGKHNDLEQVGYTSRHHTFFEMLGNFSFGDYFKESAIEYAWEFVT-GTLK 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLE-LGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++LY + + DEE IW E +GVP + I K G + NFW+MG TGPCG
Sbjct: 121 LPEEKLYVSVY--------RDDEEAYRIWSEKVGVPSERIWKLGDEDNFWQMGETGPCGP 172
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SSEI+ D +GE R +EIWN+VF+ + R + PL K IDTG+G E
Sbjct: 173 SSEIYVD-RGEEYEGDER-------YLEIWNLVFMQYNRDEKGNLTPLPKPNIDTGMGLE 224
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ ++LQN + Y+ D+ PL+E E VSG + YG + D D + R+++D+ R +
Sbjct: 225 RVASVLQNTKTNYEIDIIYPLIEFGEGVSGHR-YGES------PDTDVALRVIADHLRAL 277
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYN-----IAEILGDVYP 365
A++D + P R V +L F K G V+E N + +I+ D YP
Sbjct: 278 IFAISDGVLPSNEG--RGYVIRRILRRALRFGYKLG--VEEPFLNRGIDLVVDIMKDPYP 333
Query: 366 EIQDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
E+ S ++ ++ GEE R L KA ++ + L++
Sbjct: 334 ELDMSREFVKGVVRGEEERFIRTL-KAGMQAVEELIER---------------------- 370
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
K+ RD + G+ F YDTYG ++I E+A + L + F++++ + +ER++
Sbjct: 371 AKEEGRDT----LKGEEVFKAYDTYGFPLDLIDEIARERGLKIDIAGFQEEMEKQRERAR 426
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKR------YTFPCLDTNLVGIVIGD 538
KHF V K K Y + + + Y +T L+G+V G+
Sbjct: 427 ---------------KHFKVETKKVKPVYQHLKDIGKTSEFVGYEHYEYETELMGVVKGE 471
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
++ +L LI +T Y GGQ+ D GV + +
Sbjct: 472 ELVS------------------ELSEGEEAELILRETPFYPERGGQVGDTGV---IESDR 510
Query: 599 ENGKVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
KVE + + ++G IVH G ++ + +V + +R VD R MR HT +HLL+A
Sbjct: 511 ALFKVEDTQ-SPVDGVIVHRGKLLKGTLRVGDRVVAR--VDRERREDIMRNHTATHLLHA 567
Query: 658 ALRRVLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
AL+ +L +++ + +D DF+ + E L+ + + ++E+ +N+ I + V
Sbjct: 568 ALKNLLGEHVRQAGSLVADRYLRFDFTHF-EALTREELKSIEELVNEKIRENMPV----- 621
Query: 717 RASELPFLTHL----TVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
+ +E+ + + L I E Y D V +I + SRE C GTHV TG I +
Sbjct: 622 QVNEMDYQSALRSGAVAIFEEKYGDTVRVISAGE----FSRELCGGTHVSRTGDIGYFKI 677
Query: 773 IGYKSYNHGVRSIKCLTG 790
+ S GVR + TG
Sbjct: 678 LSESSVGAGVRRLIAQTG 695
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ FVN+GM FKNVFLG+ PY R + QKC+RV GKHNDL G S HHT
Sbjct: 30 VPENDPTLLFVNAGMVPFKNVFLGVEKRPYTRAVSCQKCLRVSGKHNDLEQVGYTSRHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K A A EF+T + LP ++LY +
Sbjct: 90 FFEMLGNFSFGDYFKESAIEYAWEFVT-GTLKLPEEKLYVS 129
>gi|442315731|ref|YP_007357034.1| Alanyl-tRNA synthetase [Riemerella anatipestifer RA-CH-2]
gi|441484654|gb|AGC41340.1| Alanyl-tRNA synthetase [Riemerella anatipestifer RA-CH-2]
Length = 867
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 249/794 (31%), Positives = 380/794 (47%), Gaps = 99/794 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR +FLD+F ++ H +V S+PIV D ++ F NSGM QFK+ FLG PR
Sbjct: 1 MTSQQIRQAFLDFF-KSKEHLIVPSAPIVLKDDPTLMFSNSGMTQFKDYFLGYKTPKAPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF +Y+K++A A E LT+
Sbjct: 60 IADTQKCLRVSGKHNDLDDVGRDTYHHTMFEMLGNWSFGNYFKKEAIAFAWELLTEV-YK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F G L D+E + W + D I K NFWEMG +GPCG
Sbjct: 119 IPKENLYVTIFEGDATENLERDQEAYNCWKSY-IAEDRILNGNKKDNFWEMGESGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E S VN D +IE+WN+VF+ R + ++ L ++DTG+
Sbjct: 178 SEIHIDLRSEEEKSKVSGKDLVNQDHPQVIEVWNLVFMEFNRKADGSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F PL+ +E++S K G N D+ + R++ D+
Sbjct: 238 GFERLCMALQGKTSNYDTDVFTPLIAKVEQLSHKKYEG---LLDNEKDI--AIRVVVDHI 292
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++ A+AD P T +R ++R A+ S +K+ L EL + +G +
Sbjct: 293 RAVSFAIADGQLPSNTGAGYVIRRILRRAISYSYRFLDMKEAFLY-ELVAVLKNQMGAFF 351
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI+ + ++ EE F +KT E GLV +
Sbjct: 352 PEIEKQEKLVTEVIKEEENSF--------------LKTI----------EHGLVRLENII 387
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ L + + G F LYDTYG ++ + +A K LT+ + F++++ + K+RSK
Sbjct: 388 QETLKKGEKT--LPGAEVFELYDTYGFPADLSRIIAEEKGLTVDEKGFDEEMEKQKQRSK 445
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
+A V YD+ T + VG + I
Sbjct: 446 KSSAQKV-------------------YDW--------VTLKDETESFVGYDQLEHKVFIT 478
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
K+ + G + ++F++T YA GGQ+ D G Y+ + E G+ E
Sbjct: 479 KYRKLENKDG-----------VFYQVVFNQTPFYAEGGGQVGDKG--YIES---EEGQFE 522
Query: 605 IGELASLEGKIVHFGNV--VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
+ L+ K + N+ + P VD+R+R H+ +HLL+ ALR V
Sbjct: 523 V-----LDTKKENNLNISLIKDLPQAPEKEFTAVVDSRLRRNTQANHSATHLLHEALREV 577
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L T QK V +D DFS + + +S + +A VE+ +N I + + +
Sbjct: 578 LGTHVEQKGSFVGADYLRFDFSHFSK-MSDEEIALVEEKVNAKIKENISLQEYRNIPIQE 636
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
+ GE Y D+V +I S+E C GTH +T I ++ S G
Sbjct: 637 ALDKGAMALFGEKYGDNVRMIQFGS-----SKELCGGTHAKSTSEIGLFKIVSESSTAAG 691
Query: 782 VRSIKCLTGDSSKA 795
+R I+ ++ + + A
Sbjct: 692 IRRIEAISSEKANA 705
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK+ FLG PR+A++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFSNSGMTQFKDYFLGYKTPKAPRIADTQKCLRVSGKHNDLDDVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF +Y+K++A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGNYFKKEAIAFAWELLTE-VYKIPKENLYVT 127
>gi|339629604|ref|YP_004721247.1| alanyl-tRNA synthetase [Sulfobacillus acidophilus TPY]
gi|379007279|ref|YP_005256730.1| alanyl-tRNA synthetase [Sulfobacillus acidophilus DSM 10332]
gi|339287393|gb|AEJ41504.1| alanyl-tRNA synthetase [Sulfobacillus acidophilus TPY]
gi|361053541|gb|AEW05058.1| alanyl-tRNA synthetase [Sulfobacillus acidophilus DSM 10332]
Length = 872
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 257/817 (31%), Positives = 377/817 (46%), Gaps = 131/817 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F QGH +V SSP+VP GD ++ F N+GM QFK+VFLG Y R
Sbjct: 1 MKASDIRQKFLQFFA-AQGHQVVPSSPLVPAGDPTLLFTNAGMVQFKDVFLGKEKRSYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
QKC+R GGKHNDL GR + H TFFEMLGN+SF DY+KRDA A FLT +
Sbjct: 60 AVTVQKCMRAGGKHNDLDQVGRTARHQTFFEMLGNFSFGDYFKRDAIDYAWRFLTG-ELG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGY 190
L +L+ T F D+E +W E+ GVP D I + G K NFW MG TGPCG
Sbjct: 119 LDPAKLWITVF--------ETDDEAYRLWQEVAGVPSDRIVRMGEKDNFWSMGDTGPCGP 170
Query: 191 SSEIHYDMKGE-----PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SSEI D +GE P L + + DR + EIWN+VF+ + R T+ PL + IDT
Sbjct: 171 SSEIFVD-RGEEYACGPQCGLGQCDCDR--IQEIWNLVFMQYNRDETGTLTPLPRPSIDT 227
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAK----PYGRTFTTSNRTDLDTSYR 301
G+G ER+ LQ S ++TDL PL+ T+E ++G P G F R
Sbjct: 228 GMGLERIAAYLQGVDSNFETDLIFPLIRTLEDMTGVSYDPGPEGMPF------------R 275
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVK-------E 351
+++D+ R IT LA+ + + +R ++R A+ + G+L+ +
Sbjct: 276 VIADHIRAITFLLAEGVSFSNEGRGYVMRRILRRAM---------RYGRLLGFESPFLYQ 326
Query: 352 LSYNIAEILGDVYPEIQDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + EI+GD YPE+ + IQ L+ EE+R L
Sbjct: 327 LVPVVGEIMGDAYPEVTNGQTVIQELVKNEENRFLATLSA-------------------- 366
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
G++ L ++L +SG+ AF LYDT+G ++ +++A ++ +
Sbjct: 367 ---------GMRVLAQKLESLQPGAVLSGEDAFQLYDTFGFPLDLTRDVADEHQVRVDEA 417
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
FE + E +ER++ V +H P + Y T +
Sbjct: 418 QFEVLMQEQRERARQNRGKTV--------QHLPAPGPTTFWGYE--------TLELDNEP 461
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
+ I +GD ++ ++ WV L +T Y GGQ+ D G
Sbjct: 462 IQAIFLGDD----------------RVERLETGDQGWVYLA--RTPFYPEGGGQVGDTG- 502
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
++T T G E+ + I H V F V G +++ V RL MR HT
Sbjct: 503 -WITTAT---GLAEVLDTLKSGETIWHVVAVRQGF-VKSGQPAQLRVSVEKRLAAMRNHT 557
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+HLL+AALR++L +Q V D DFS Y L+ + V A+E +N+ I +
Sbjct: 558 GTHLLHAALRQILGEGVHQTGSLVAPDRLRFDFS-YPRPLTREQVTAIEDLVNEWILQDL 616
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIES 769
V + M E L G+ Y + V ++ + S+E C GTH TG I
Sbjct: 617 PVHKAEMGKDEALAQGALAFF-GDKYGERVRVVTVPGA----SQELCGGTHCTRTGEIGL 671
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTA 806
++ S G R I+ +TG +S A + +S A
Sbjct: 672 FAILEDSSVGAGSRRIEAVTGLNSLTAFRERRAVSDA 708
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 59/87 (67%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P GD ++ F N+GM QFK+VFLG Y R QKC+R GGKHNDL GR + H T
Sbjct: 28 VPAGDPTLLFTNAGMVQFKDVFLGKEKRSYSRAVTVQKCMRAGGKHNDLDQVGRTARHQT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLT 904
FFEMLGN+SF DY+KRDA A FLT
Sbjct: 88 FFEMLGNFSFGDYFKRDAIDYAWRFLT 114
>gi|319644298|ref|ZP_07998792.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
gi|345519672|ref|ZP_08799087.1| alanyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
gi|317384193|gb|EFV65166.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
gi|345457115|gb|EET15910.2| alanyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
Length = 871
Score = 352 bits (903), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 259/795 (32%), Positives = 380/795 (47%), Gaps = 113/795 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K IR SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 1 MTAKEIRDSFKSFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L
Sbjct: 60 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIGWAWEYLVDVLKI 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D LY T F GS + GL D E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 DPKD-LYATVFEGSPEEGLERDNEAASYWEQF-LPKDHILNGNKHDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGEPSSAL----ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D + E A VN D +IEIWN+VF+ R + ++ L IDTG+
Sbjct: 178 SEIHIDSRSEEEKAQIPGNQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV LQ KTS YDTD+F P+L+ I +++G T+ N+ D+ + R+++D+
Sbjct: 238 GFERLVRTLQGKTSNYDTDVFQPILKAIAEMAGT-----TYGQDNQKDI--AMRVIADHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++ D P A +R ++R A+ KQ + K L I E +G+ Y
Sbjct: 291 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-ENMGEAY 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ K L++ + E+ + + L G++ L
Sbjct: 350 PELNAQ--------------------------KTLIEKVIKEEEESFLRT--LETGIRLL 381
Query: 425 TKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
K + A+ EISG AFTLYDT+G ++ + + +T+ E F ++ + KER
Sbjct: 382 DKTMNDAKAAGKKEISGVDAFTLYDTFGFPLDLTELILRENGMTVNEEEFNAEMQKQKER 441
Query: 483 SKAKAASNVPDIDLMDLK----HFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIG 537
++ AA V D + +K HF YD+ Y+T+ RY
Sbjct: 442 ARNAAA--VETGDWITIKEGDTHF------VGYDFTEYETSILRYR-------------- 479
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
I+ ++ ++ T YA +GGQ+ D GV
Sbjct: 480 ---------------------QIKQKNQTLYQIVLSDTPFYAESGGQVGDTGV-----IV 513
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
E +EI + +H + P + VD R C H+ +HLL+
Sbjct: 514 SEFETIEIIDTKKENNLPIHITKKLPEHLDVPMMAC---VDTEKRAACAANHSCTHLLDE 570
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRH 715
ALR+VL T QK V + DFS + + ++ + VE +N I + + + R+
Sbjct: 571 ALRQVLGTHVEQKGSLVTPESLRFDFSHF-QKVTDKQLREVEHLVNAKIRENIPLTEYRN 629
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ + L + + GE Y D+V ++ + S E C GTHV TG I +I
Sbjct: 630 LPIEKAKELGAIALF-GEKYGDEVRVVQFGN-----SIEFCGGTHVPATGKIGMVRIISE 683
Query: 776 KSYNHGVRSIKCLTG 790
S GVR I+ +TG
Sbjct: 684 SSVAAGVRRIEAITG 698
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDIILGNHPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 92 LGNWSFGDYFKKEAIGWAWEYL 113
>gi|303236524|ref|ZP_07323109.1| alanine--tRNA ligase [Prevotella disiens FB035-09AN]
gi|302483272|gb|EFL46282.1| alanine--tRNA ligase [Prevotella disiens FB035-09AN]
Length = 897
Score = 352 bits (903), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 262/818 (32%), Positives = 394/818 (48%), Gaps = 120/818 (14%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLT 65
I + + + IR SF +F ++GH +V S+P+V D ++ F N+GM Q+K++ LG T
Sbjct: 7 IKNMKMMTANEIRDSFKKFF-ESKGHVIVPSAPMVIKDDPTLMFTNAGMNQWKDIILG-T 64
Query: 66 PAPYPRV-ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEF 124
P PR A+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K +A A E+
Sbjct: 65 KEPEPRRRADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKENAIDYAWEY 124
Query: 125 LTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGS 184
L + P D LY T F GS + G+ D+E W + +P DHI NFWEMG
Sbjct: 125 LVEVLKLDPKD-LYVTVFEGSPEEGIARDDEAASYWAK-HLPEDHIINGNKHDNFWEMGE 182
Query: 185 TGPCGYSSEIHYDMKG--EPSSALAR--VNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
TGPCG SEIH D + E + R VN D +IEIWNIVF+ +R S T+ PL+
Sbjct: 183 TGPCGPCSEIHVDSRSAEEKAKVPGRELVNKDDPQVIEIWNIVFMQFQRKSDGTLEPLAM 242
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTT---------S 291
N IDTG+GFERLV +LQ K S YDTD+F P ++ IE++SG K YG FTT +
Sbjct: 243 NVIDTGMGFERLVRMLQGKNSNYDTDIFQPTIKEIERLSG-KKYG--FTTPSGKEGEGKT 299
Query: 292 NRTDLDTSYRMLSDYSRMITVALADNMFP---DATAKLRNVVRDALLISEDVFKVKQGKL 348
+ +D + R+++D+ R + ++AD+ P A +R ++R A+ + + K+ +
Sbjct: 300 EQEKIDIAMRVVADHMRAVAFSIADSQLPGNAKAGYVIRRILRRAVRYAYTFLEQKEAFI 359
Query: 349 VKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQ 408
K L+ I E +G+ YPE+ I ++ EE F LR
Sbjct: 360 YKLLNTFIHE-MGNAYPELPAQRELIARVIKEEEDSF--LRT------------------ 398
Query: 409 FNIMEEPGLVLGVKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLT 466
L G+ LT + + TE+ G AF L+DTYG ++ + + T
Sbjct: 399 --------LEKGINLLTNAMDEMKAQGKTELDGKEAFRLFDTYGFPLDLTELICRENGFT 450
Query: 467 LCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPC 526
+ + FE ++ +++++A+ A+ V + D + LK + YDY + C
Sbjct: 451 VDEKQFEAEM--AQQKARARNAAVVENGDWVVLKEG--EQEFVGYDY--------TEYEC 498
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
H +R+ + + + N + ++ D T Y GGQ+
Sbjct: 499 -------------------HILRYRK-------VTQKKNTFFEIVLDHTPFYGEMGGQVG 532
Query: 587 DIGVAYLTNTTQENGKVEIGELASLEGKIVHF-----GNVVSSFKVTPGLTSRVEVDARM 641
D GV E+ ++I + + +H NV + F VD
Sbjct: 533 DQGV-----LVSEDETIDIIDTKRENNQSIHIVKQMPKNVEADFMAC--------VDTDK 579
Query: 642 RLGCMRAHTTSHLLNAALRRVLT--CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R HT +HLL+ AL++VL C QK V +D DFS + + ++ + + VE+
Sbjct: 580 RDASAANHTATHLLDYALKQVLGDHCE-QKGSYVSADTLRFDFSHF-QKVTDEELRQVER 637
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+ND+I ++ D E + GE Y D V +I S E C G
Sbjct: 638 MVNDMIRQDLKCDEHRNTPLEEAKKMGAVALFGEKYGDKVRVISFGP-----SCEFCGGI 692
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H +TG I ++ S G+R I+ LTG+ + AV
Sbjct: 693 HATSTGRIGFFKIVNESSVAAGIRRIEALTGEQCEEAV 730
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRV-ANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
D ++ F N+GM Q+K++ LG T P PR A+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 44 DPTLMFTNAGMNQWKDIILG-TKEPEPRRRADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 102
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K +A A E+L + P D LY T
Sbjct: 103 MLGNWSFGDYFKENAIDYAWEYLVEVLKLDPKD-LYVT 139
>gi|305666370|ref|YP_003862657.1| alanyl-tRNA synthetase [Maribacter sp. HTCC2170]
gi|88708362|gb|EAR00599.1| alanyl-tRNA synthetase [Maribacter sp. HTCC2170]
Length = 871
Score = 352 bits (902), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 258/803 (32%), Positives = 383/803 (47%), Gaps = 120/803 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ SK IR+ FLD+F T+ H +V S+P+V D ++ F N+GM QFK FLG + A PR
Sbjct: 1 MNSKEIRAQFLDFF-ETKKHKIVPSAPMVIKDDPTLMFTNAGMNQFKEFFLGNSVAKSPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G+D+YHHT FEMLGNWSF DY+K++A A E LT +
Sbjct: 60 MADTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKKEAIEWAWELLT-DKLQ 118
Query: 132 LPLDRLYFTYFGGS-DQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+ D LY + F GS D L D E ++W + VP+D I K NFWEMG GPCG
Sbjct: 119 IDKDSLYVSVFEGSKDSDNLEMDNEAYELWSGI-VPKDRIIMGNKKDNFWEMGDQGPCGP 177
Query: 191 SSEIHYDM-----KGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D+ K E S A VN D ++EIWN+VF+ + R + + PL + ++DT
Sbjct: 178 CSEIHVDIRPAEEKAETSGAFL-VNQDHPLVVEIWNLVFMQYNRKADGALEPLPEKHVDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL +LQ S YDTD+F P++ IE ++ A YG+ ++D + R+++D
Sbjct: 237 GMGFERLCMVLQGVQSNYDTDVFTPIIREIETITNA-DYGKN------EEIDIAIRVIAD 289
Query: 306 YSRMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+ R + ++AD P T + + + F + + L + E +G+
Sbjct: 290 HIRAVAFSIADGQLPSNTGAGYVIRRILRRAIRYGFTFLNTKEPFMYRLVNVLTETMGNA 349
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++D I+ ++ EE F N LEQ GLVL
Sbjct: 350 FPELKDQRQLIENVVKEEENSFLNT-----------------LEQ-------GLVLLDNL 385
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
++K + + G AF LYDTYG ++ + K TL + F + + E K+RS
Sbjct: 386 VSKAKGK-----VVQGRKAFELYDTYGFPIDLTALILEEKGYTLDEKGFHEAMKEQKDRS 440
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
++AS + D M L +DD + YD L+TN+
Sbjct: 441 --RSASEIAKEDWMVL-----SDDSEQEFVGYD---------LLETNV------------ 472
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTN 595
+++ + + + Q + ++F+ T Y GGQ+ D G V Y+ +
Sbjct: 473 --KLVKYRKVTSKKEGEQYQ------MVFNLTPFYPEGGGQVGDKGYLEAPNGDVVYILD 524
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTS---RVEVDARMRLGCMRAHTTS 652
T +EN +IVHF K P TS + VD + R HT +
Sbjct: 525 TKKEN------------NEIVHFA------KNLPKSTSDTFKAVVDKKQRQRTAANHTAT 566
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL+ ALR VL QK V S DFS + + ++V+ + VE ++N I Q+ +
Sbjct: 567 HLLHQALREVLGNHVEQKGSAVHSKYLRFDFSHFSK-MTVEELREVENFVNARIEGQLPL 625
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
D E + GE Y + V I S E C G HV T I
Sbjct: 626 DENRSVPMEEALKGGAMALFGEEYGETVRTIRFGQ-----SMELCGGAHVKITSDIWHFK 680
Query: 772 VIGYKSYNHGVRSIKCLTGDSSK 794
+ + G+R I+ +T D+ K
Sbjct: 681 IKSEGAVAAGIRRIEAITYDAVK 703
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG + A PR+A++QKC+RV GKHNDL G+D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEFFLGNSVAKSPRMADTQKCLRVSGKHNDLEEVGKDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT + + D LY +
Sbjct: 92 LGNWSFGDYFKKEAIEWAWELLT-DKLQIDKDSLYVS 127
>gi|399032732|ref|ZP_10732011.1| alanine--tRNA ligase [Flavobacterium sp. CF136]
gi|398068887|gb|EJL60276.1| alanine--tRNA ligase [Flavobacterium sp. CF136]
Length = 878
Score = 352 bits (902), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 249/800 (31%), Positives = 385/800 (48%), Gaps = 97/800 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ +R FLD+F + GH +V S+PIV D ++ F NSGM QFK FLG R
Sbjct: 1 MKSQDVRKQFLDFF-QSNGHLIVPSAPIVLKDDPTLMFNNSGMAQFKEYFLGNGTPKSKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A LT+
Sbjct: 60 IADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEAINWAWTLLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY + F GS + +P D+E DIW L + D I K NFWEMG GPCG
Sbjct: 119 IPKENLYVSVFEGSREDNVPFDQEAWDIWKTL-IDEDRIILGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSAL----ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E AL + VN D ++EIWN VF+ R + ++ L ++DTG+
Sbjct: 178 SEIHVDLRPESEKALVTGKSLVNNDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAK----PYGRTFTTSNRTDLDTSYRML 303
GFERL LQ KTS YDTD+F PL+E +E+++G K N+T++ + R++
Sbjct: 238 GFERLCMALQGKTSNYDTDVFTPLIEKVEQITGLKYTSDEVKNISEEQNKTNI--AIRVV 295
Query: 304 SDYSRMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D+ R + A+AD P T + + + F + + +L +A +G
Sbjct: 296 VDHVRAVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLNTKEPFINKLVEVLANQMG 355
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
+ +PEI+ + ++ EE F LR L+Q G+
Sbjct: 356 EFFPEIKSQQQLVTNVIREEEASF--LRT---------------LDQ-----------GL 387
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
+ L +A+ E+SG AF LYDT+G K++ + K ++ F+ + E K+
Sbjct: 388 QLLDNVIAQTKG-EEVSGAKAFELYDTFGFPKDLTALILKEKNMSFNEAEFDASMQEQKK 446
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
RS+A + + D ++ P + + Y N + T
Sbjct: 447 RSRAASEVSTEDWSVL----IPGNVEAF-VGYDKTENEVKIT------------------ 483
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
R + + D I + ++ D T Y GGQ+ D G N T
Sbjct: 484 -------RIRKVDSKKDGILYQ------IVLDSTPFYPEGGGQVGDKGTLVSANET---- 526
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+EI + I+HF + + G ++V D +R + H+ +HL++ ALR+
Sbjct: 527 -IEIIDTKKENNLILHFAKQLPE-NIEAGFVAKVNTD--LRGSTSKNHSATHLMHLALRK 582
Query: 662 VL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ-VDRRHMRAS 719
+L T QK V + DFS + + +S + + VE +N I Q+Q V+ R++
Sbjct: 583 LLGTHVEQKGSLVNPNYLRFDFSHFSK-VSDEELRQVEASVNAQIEAQLQLVEHRNIPIK 641
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
E + + GE Y D+V +I+ + S+E C G HV NT I +I +
Sbjct: 642 EALDKGAMALF-GEKYGDNVRMIEFGE-----SKELCGGIHVKNTAEIWHFKIISEGAVA 695
Query: 780 HGVRSIKCLTGDSSKAAVEN 799
G+R I+ +TGD+ K+ +N
Sbjct: 696 AGIRRIEAITGDAVKSFYQN 715
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK FLG R+A++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFNNSGMAQFKEYFLGNGTPKSKRIADTQKCLRVSGKHNDLEDVGFDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A LT+ +P + LY +
Sbjct: 92 LGNWSFGDYFKKEAINWAWTLLTE-VYKIPKENLYVS 127
>gi|34540951|ref|NP_905430.1| alanyl-tRNA synthetase [Porphyromonas gingivalis W83]
gi|419971241|ref|ZP_14486700.1| alanine--tRNA ligase [Porphyromonas gingivalis W50]
gi|41018164|sp|Q7MV54.1|SYA_PORGI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|34397266|gb|AAQ66329.1| alanyl-tRNA synthetase [Porphyromonas gingivalis W83]
gi|392609003|gb|EIW91827.1| alanine--tRNA ligase [Porphyromonas gingivalis W50]
Length = 876
Score = 352 bits (902), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 251/798 (31%), Positives = 386/798 (48%), Gaps = 118/798 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L SK IR SF +F ++GH +V S+P+V GD ++ F N+GM QFK++ LG T A Y R
Sbjct: 2 LTSKEIRESFKTFFA-SKGHKIVPSAPMVIKGDPTLMFTNAGMNQFKDIILGNTEAKYTR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIEWAWEYLV-TVLG 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L RLY T F G+ + GL D E W + +P + I NFWEMG TGPCG
Sbjct: 120 LDPQRLYATVFEGNPEEGLDRDNEAASYWAQF-LPEERIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + A L +N +IEIWN+VF+ + R + ++ PL IDTG+
Sbjct: 179 SEIHIDLRSDEERAQINGLELINKSHPQVIEIWNLVFMQYNRKADASLTPLPHKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F PL+ T+ ++G YG T+ D + R+++D+
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPLIRTLATMTGI-GYGEDSTS------DIAMRVVADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I A+ D P A +R ++R A+ ++ + + L + + +GD Y
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLHCREAFMYRLLP-TLIDTMGDAY 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+Q I ++ EE F LR L G++ L
Sbjct: 351 PELQAQRELISRVIKEEEESF--LRT--------------------------LETGIRLL 382
Query: 425 TKQLARDPSI--TEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
K++A + + T + G AF LYDT+G ++ + + +T+ F+ ++ + KER
Sbjct: 383 EKKIADNKATGSTVLDGVAAFELYDTFGFPLDLTALILSENGMTVDESGFDTEMQKQKER 442
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
++ AA D ++ ++ Y F +T +
Sbjct: 443 ARNAAAVEAGDWVVL---------------REGESKFSGYDFTETETEI----------- 476
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQ-------IDDIGVAY-LT 594
+R+ + ++ ++ + ++ T YA GGQ ID+ GVAY +
Sbjct: 477 -----LRYRQ-------VKQKNKEYFQVVLSDTPFYAEMGGQVGDSGQLIDESGVAYDIF 524
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+T +EN VH + T +R+ D R + HT +HL
Sbjct: 525 DTKRENNLS------------VHLMKKLPE-STTDTFVARINQDKRRQAEA--NHTATHL 569
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
L+ ALR VL T QK V + DFS +G+ +S + + VE+ +++ I Q +
Sbjct: 570 LHEALREVLGTHVEQKGSFVSPEVLRFDFSHFGK-MSPEEIRKVEELVSERIRADFQREE 628
Query: 714 -RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
R + +E + + + GE Y ++V ++ S E C GTH+ +TG I + +
Sbjct: 629 FRDVPIAEAQAMGAMALF-GEKYGEEVRVLKYGS-----SVELCGGTHIPSTGMIGAFRI 682
Query: 773 IGYKSYNHGVRSIKCLTG 790
+ S GVR I+ +TG
Sbjct: 683 VTESSIASGVRRIEAVTG 700
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++ LG T A Y RVA+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 32 GDPTLMFTNAGMNQFKDIILGNTEAKYTRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 91
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K++A A E+L + L RLY T
Sbjct: 92 MLGNWSFGDYFKKEAIEWAWEYLV-TVLGLDPQRLYAT 128
>gi|375148923|ref|YP_005011364.1| alanyl-tRNA synthetase [Niastella koreensis GR20-10]
gi|361062969|gb|AEW01961.1| alanyl-tRNA synthetase [Niastella koreensis GR20-10]
Length = 879
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 249/789 (31%), Positives = 381/789 (48%), Gaps = 94/789 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR F+++F N +GH +V S+PIV D ++ F N+GM QFK+ FLG AP+PR
Sbjct: 2 MTSAEIRQLFMEFFRN-KGHEIVPSAPIVVKNDPTLLFTNAGMNQFKDYFLGNKKAPFPR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A + E LT+
Sbjct: 61 VADTQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIAWSWELLTE-VYK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P DRLY TYF G L DEE + W + P D I K NFWEMG TGPCG
Sbjct: 120 IPKDRLYVTYFQGDTAENLAKDEEAFNEWSKFVAP-DRILPGNKKDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEP----SSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D + + S VN D +IEIWN VF+ R ++ PL ++DTG+
Sbjct: 179 SEIHVDCRSDEERKQQSGAELVNNDHPQVIEIWNNVFMQFNRKKDGSLEPLPAKHVDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLD--TSYRMLSD 305
GFERLV +LQ+K S YD+D+F + IE ++ K Y S D ++R+L+D
Sbjct: 239 GFERLVRVLQSKQSNYDSDIFTGTIAAIETIA-KKKYDPNTPQSTSADWHKAVAFRVLAD 297
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I+ +AD P T +R ++R A+ KQ L+ +L +A
Sbjct: 298 HIRAISFTIADGQLPSNTGAGYVIRRILRRAVRYYYTFLDYKQ-PLLHQLVPVLATQFQT 356
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
V+PE+Q + + ++ EE F + +K+ ++ +
Sbjct: 357 VFPELQQQQDFVAKVIKEEEDAFLRTLEKGLKKIDEIIGS-------------------- 396
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
A++ ++G AF LYDTYG ++ + +A L + + F+ ++N+ K+R
Sbjct: 397 ------AKNKV---VNGSAAFELYDTYGFPIDLTRLIARENNLEVDEDGFKAEMNQQKDR 447
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
++A A + D ++ + NS +T +G
Sbjct: 448 ARAATAISAEDWVVL------------------NENS--------NTGFIGYDHTQAEAK 481
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
+ K+ A+ S L+ + T YA +GGQ+ D G + E +
Sbjct: 482 VIKYRKVTAKGKTSFQ-----------LVLNTTPFYAESGGQVGDTGALFF-----EGEE 525
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
V + + I+HF + +T + +R++ R R H+ +HLL+AALR+V
Sbjct: 526 VAVIDTKKENDLIIHFVEKL-PINITGIVDARIDTIRRARTAVH--HSATHLLHAALRKV 582
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L T QK V + DFS + + ++ D + VE +N+ I + V + + E
Sbjct: 583 LGTHVAQKGSLVNDEYLRFDFSHFAK-MTTDEITKVEALVNEKIRANIPVVIKELPKEEA 641
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
L + + GE Y DV+ + I D S E C GTHV TG + + + G
Sbjct: 642 LKLGAMALF-GEKY-GDVVRVVIMDP--AYSVELCGGTHVGATGELGLFKIKHETAVAAG 697
Query: 782 VRSIKCLTG 790
VR I+ ++G
Sbjct: 698 VRRIEAISG 706
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 72/98 (73%), Gaps = 1/98 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ FLG AP+PRVA++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLLFTNAGMNQFKDYFLGNKKAPFPRVADTQKCLRVSGKHNDLEEVGVDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
LGNWSF DY+K++A + E LT+ +P DRLY T+
Sbjct: 93 LGNWSFGDYFKKEAIAWSWELLTE-VYKIPKDRLYVTY 129
>gi|410096176|ref|ZP_11291165.1| alanyl-tRNA synthetase [Parabacteroides goldsteinii CL02T12C30]
gi|409226815|gb|EKN19719.1| alanyl-tRNA synthetase [Parabacteroides goldsteinii CL02T12C30]
Length = 875
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 256/801 (31%), Positives = 396/801 (49%), Gaps = 117/801 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF ++F + Q H +V S+P+V GD ++ F N+GM QFK++ LG P Y R
Sbjct: 2 LTAKEIRESFKEFFASKQ-HQIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNVPIKYSR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIGWAWEYLVD-VLK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L RLY T F GS GL D+E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 LDPKRLYATVFEGSPAEGLSRDDEAAGYWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEP----SSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + SS VN D +IEIWN+VF+ R + ++ PL IDTG+
Sbjct: 179 SEIHIDLRSDEERAVSSGAEMVNKDHPQVIEIWNLVFMQFNRKADGSLEPLPAKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F P+++ I + +G K YG NR D + R+++D+
Sbjct: 239 GFERLCMSLQGKTSNYDTDVFQPIIQVIAEKTGTK-YG-----DNRQQ-DVAMRVIADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++ D P A +R ++R A+ ++ + L I E +GD Y
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGRREAFMYSLLPVLI-ETMGDAY 350
Query: 365 PEI--QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
PE+ Q ++ + + EES ++T L G++
Sbjct: 351 PELVAQKTLIEKVIKEEEES----------------FLRT--------------LETGIR 380
Query: 423 YLTKQLARDPSI--TEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K++ + T ISG AFTLYDTYG ++ + + + + + F ++ + K
Sbjct: 381 LLDKKIEETKAAGKTVISGVDAFTLYDTYGFPLDLTELILRENGMEVNIDEFNAEMQKQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
ER++ AA I+ D + K+ +G +
Sbjct: 441 ERARNAAA-----IETGDWVVLKEGESKF--------------------------VGYDL 469
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
F + +R+ + I+ ++ ++ D+T YA GGQ+ D G +L ++
Sbjct: 470 FECEAEILRYRK-------IKQKNKELFQIVLDQTPFYAEMGGQVGDTG--WL---IADD 517
Query: 601 GKVEIGELASLEGKIVHF-----GNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
K+++ + VHF +V+++F +++ + R+ C H+ +HLL
Sbjct: 518 EKLDVVDTKRENNLPVHFVTRLPKDVIATFT--------AKINEKKRIQCECNHSATHLL 569
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDR 713
+ LR VL T QK V + DFS + + ++ + + VEK +++ I AN +
Sbjct: 570 HEVLREVLGTHVEQKGSYVSPEALRFDFSHF-QKVTDEEIRQVEKLVSEKIRANYPLEEH 628
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
R+M ++ L + + GE Y ++V ++ S E C GTH+ TG I S VI
Sbjct: 629 RNMPIAQAQALGAMALF-GEKYGEEVRVVKYGS-----SIELCGGTHIPATGMIGSLRVI 682
Query: 774 GYKSYNHGVRSIKCLTGDSSK 794
S GVR I+ +T + ++
Sbjct: 683 AESSIAAGVRRIEAVTAEGAE 703
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++ LG P Y RVA+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 32 GDPTLMFTNAGMNQFKDIILGNVPIKYSRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 91
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K++A A E+L + L RLY T
Sbjct: 92 MLGNWSFGDYFKKEAIGWAWEYLVD-VLKLDPKRLYAT 128
>gi|409098638|ref|ZP_11218662.1| alanyl-tRNA ligase [Pedobacter agri PB92]
Length = 871
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 246/793 (31%), Positives = 391/793 (49%), Gaps = 101/793 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ ++ IR +FL +F + Q H +V S+PIV D ++ F N+GM QFK++FLG Y R
Sbjct: 1 MTAQEIRQAFLSFFESKQ-HHVVPSAPIVVKNDPTLMFTNAGMNQFKDLFLGEAAIKYAR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++Q+C+RV GKHNDL G D+YHHT FEMLGNWSF DY+K+DA + E LT+
Sbjct: 60 VADTQRCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKDAIAWSWELLTE-IYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P D+LY TYF G ++ GL D+E D+W + V HI K NFWEMG TGPCG
Sbjct: 119 IPKDKLYVTYFEGDEKEGLEKDQEAYDLWKQY-VDESHILPGNKKDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D + + AL VNAD +IEIWN VF+ R+ ++ L ++DTG+
Sbjct: 178 SEIHVDCRTDEEKALVDGATLVNADHPQVIEIWNNVFMQFNRLKDGSLQSLPAKHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERLV +LQ K+S YDTD+F P+++ I SG K YG T D + R+++D+
Sbjct: 238 GFERLVRVLQQKSSNYDTDVFQPMIQFIADKSGIK-YGANEKT------DIAMRVMADHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I +AD P A +R ++R A+ + K+ + +L +AE V+
Sbjct: 291 RAIAFVIADGQLPSNNKAGYVIRRILRRAVRYAYTFLNFKE-PFLNQLVPLLAEQFKGVF 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
E+ +Q ++ EE F LR L G++
Sbjct: 350 DELISQQYFVQKVVLEEEVSF--LRT--------------------------LSTGIQRF 381
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ A + + + G AF L DT+G ++ + +A K ++ +EQ L + K+ S+
Sbjct: 382 ERYQATNNT---VEGSFAFELSDTFGFPIDLTELMAREKGWSVDLAGYEQALKKQKDDSR 438
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
A A + D +++ D++ ++ +G I+
Sbjct: 439 AATAIDTGDWVIVN------ADEQSEF------------------------VGYDDLEIE 468
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
+++ + ++ + ++ +T YA +GGQ+ D G L + +++ V+
Sbjct: 469 TEILKYRK-------VKAKGKEQYQIVLRQTPFYAESGGQVGDTG--RLEDHSRQFW-VD 518
Query: 605 IGELASLEGKIVHFGNVVSSFKVTPGLTSR--VEVDARMRLGCMRAHTTSHLLNAALRRV 662
I + G VHF +++ L + +D R+ H+ +HLL+AAL++V
Sbjct: 519 ITDTKKENGLTVHFADILPD-----NLEGKFWAVIDEDKRILTEDNHSATHLLHAALKQV 573
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L QK V +D DFS + + ++ D +A +E +N I +++ +
Sbjct: 574 LGNHVNQKGSLVNADYLRFDFSHFAK-VTDDELAQIEVIVNQKIRQNIKLKEERDVPYQD 632
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
+ +T + GE Y D V +I D S+E C GTHV TG I S ++ + G
Sbjct: 633 AIESGVTALFGEKYGDFVRMITFDDH---FSKELCGGTHVKATGQIGSFKIVSESAVAAG 689
Query: 782 VRSIKCLTGDSSK 794
VR I+ +T D ++
Sbjct: 690 VRRIEAITADKAE 702
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++FLG Y RVA++Q+C+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDLFLGEAAIKYARVADTQRCLRVSGKHNDLEEVGIDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
LGNWSF DY+K+DA + E LT+ +P D+LY T+
Sbjct: 92 LGNWSFGDYFKKDAIAWSWELLTE-IYKIPKDKLYVTY 128
>gi|339481760|ref|YP_004693546.1| alanyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
gi|338803905|gb|AEJ00147.1| alanyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
Length = 865
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 246/795 (30%), Positives = 392/795 (49%), Gaps = 109/795 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR FL++F + GHT+V SSP+VP D ++ F N+GM QFK+VFLG PY R
Sbjct: 1 MKSSEIRQQFLEFF-ESHGHTIVASSPLVPGNDPTLLFTNAGMVQFKDVFLGQDKRPYAR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+KR+A + A EFLT +
Sbjct: 60 AVSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRNAIQFAWEFLT-VSLK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+P ++L+ T + D+E DIWL E+GV + + NFW+MG TGPCG
Sbjct: 119 IPREKLWVTVYA--------EDDEAADIWLNEIGVDPSRVVRIATMDNFWQMGDTGPCGP 170
Query: 191 SSEIHYD----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEI YD +KG P + +AD + IEIWN+VF+ + R SADT+ PL K +DTG
Sbjct: 171 CSEIFYDHGPEVKGGPPGS---ADADGDRYIEIWNLVFMQYNRDSADTLHPLPKPSVDTG 227
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-DTSYRMLSD 305
+G ER+ ++Q S Y+ DLF L++ + + N DL D S ++++D
Sbjct: 228 MGLERISAVMQQVHSNYEIDLFQSLIKAAARAT------------NTEDLADNSLKVIAD 275
Query: 306 YSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGK-LVKELSYNIAEILGDVY 364
+ R + +AD + P + + + R +++ Q + +L ++++++G Y
Sbjct: 276 HIRACSFLIADGVIPGSEGRGYVLRRIIRRAIRHGYQLGQKQPFFYQLVEDLSKVMGQAY 335
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ + ++ +L Q E E+F E G+ + L
Sbjct: 336 PELVAAKARVAAVL------------------------QQEEERFAETLEHGM----QVL 367
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ L+R I + G+ AF LYDT+G ++ ++ + +T+ H FEQ + ++R +
Sbjct: 368 EEALSR--KIKVLDGETAFRLYDTFGFPLDLTADIGRERGITIDHAGFEQAM--ARQREQ 423
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
A+AA+ F + + +Y+ + + Y + L QV I
Sbjct: 424 ARAANK-----------FTMQEGGIEYN---GSQTTFYGYESLQHE-------GQVLAIY 462
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
K G+++D I+ A V + D+T YA +GGQ+ D G NG
Sbjct: 463 KQ-------GSAVDFIEAGDEALV--VLDQTPFYAESGGQVGDSG-----ELLAANGTFA 508
Query: 605 IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL- 663
+ + ++ + ++ S ++ T +V+ R H+ +HLL+AALR+VL
Sbjct: 509 VADTQKIQAGVFGHKGLLRSGRLVIKDTVLAKVNPLTRTSTANNHSATHLLHAALRKVLG 568
Query: 664 TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPF 723
QK V ++ DFS + L+VD + E+ +N+ I + V M+ +
Sbjct: 569 NHVTQKGSLVDANRARFDFS-HNAPLTVDELRETERLVNEQIRHNWVVASETMKYDDAIK 627
Query: 724 LTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVR 783
+ + GE Y D V +I + + S E C GTHV G I ++ G+R
Sbjct: 628 RGAMALF-GEKYSDVVRVIGMGE----FSTELCGGTHVSQIGQIGFFKIVTESGVAAGIR 682
Query: 784 SIKCLTGDSSKAAVE 798
++ +TG KAAVE
Sbjct: 683 RVEAVTG---KAAVE 694
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLG PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLLFTNAGMVQFKDVFLGQDKRPYARAVSSQRCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KR+A + A EFLT + +P ++L+ T
Sbjct: 88 FFEMLGNFSFGDYFKRNAIQFAWEFLT-VSLKIPREKLWVT 127
>gi|312132175|ref|YP_003999515.1| alanyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
gi|311908721|gb|ADQ19162.1| alanyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
Length = 887
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 254/801 (31%), Positives = 392/801 (48%), Gaps = 110/801 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR +FLD+F +GH +V S+P+V D ++ F NSGM QFK+ FLG P R
Sbjct: 1 MTSHEIRKAFLDFF-EKRGHLIVPSAPLVAKNDPTLMFNNSGMAQFKDFFLGNGNPPSKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A + E LT+
Sbjct: 60 IADTQKCLRVSGKHNDLEEVGFDTYHHTMFEMLGNWSFGDYFKKEALAWSWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DR+Y + F G+ G+P D+E DIW + + I K NFWEMG GPCG
Sbjct: 119 LPKDRIYVSVFEGNPSEGVPFDQEAFDIWKSIIGDENRIILGNKKDNFWEMGDIGPCGPC 178
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + S VN D ++EIWN VF+ ++R + T++PL + ++DTG+
Sbjct: 179 SEIHIDLRDQEEVDQISGKELVNKDHPQVVEIWNNVFMQYERKADGTLIPLPEKHVDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +Q K S YDTDLF ++ IE++SG K YG T S+ +D + R+++D+
Sbjct: 239 GFERLCMAIQGKKSNYDTDLFQNTIQVIEQLSGFK-YGVNGTLSSDNYVDVAMRVIADHL 297
Query: 308 RMITVALADNMFPDATAKLRNVVRDALLISE----DVFKVKQGKLVKELSYNIAEILGDV 363
R ++ A++D P + AK V+R L + ++ + K L +A+ DV
Sbjct: 298 RAVSFAISDGQLP-SNAKAGYVIRRILRRALRYGYSYLNFREPFMCK-LVPVLAKQFADV 355
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE+Q ++ + ++ EE + F LR LEQ G+K
Sbjct: 356 FPELQAQVDFVSKVVEEEEKTF--LRT---------------LEQ-----------GLKR 387
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L D +SG+ F L DT+G ++ +A K + E +++ L E K RS
Sbjct: 388 LDVLFKEDKGEKLLSGETVFELSDTFGFPVDLTALIAREKGFGIDEEGYKKALEEQKARS 447
Query: 484 KAKAASNVPD-IDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV-- 540
+ A D ++L DT+ V + DQ+
Sbjct: 448 RKDAQKEAADWVELG------------------------------DTDAVEFLGYDQLSS 477
Query: 541 -FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
+ K+ I + G I ++ D+T YA GGQ+ D G + + T
Sbjct: 478 TALLTKYRISKTKQGQEIH-----------VVLDQTPFYAEMGGQVGDTGTITIGDQT-- 524
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVE----VDARMRLGCMRAHTTSHLL 655
+ + + +H ++ ++ G VE V+A R + HT +HL+
Sbjct: 525 ---LHVSDTRKENDLFIHVVKDKNAAEILSGYEEPVEVFAQVNAERRKNIEKNHTATHLM 581
Query: 656 NAALRRVLTCTYQKSCRVFSDECA-LDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDR 713
AAL+ VL + +DE DFS + + ++ + + VE +N+ I AN ++ ++
Sbjct: 582 LAALKEVLGSHIVQRGSYQNDELTRFDFSHFAK-VTDEELKKVEDIVNEKIRANILKGEK 640
Query: 714 RHMRASELPFLTHL----TVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIES 769
R+ +PF + T GE Y D V +I ++ E C GTHV +TG I
Sbjct: 641 RN-----VPFQEAVDMGATATFGEKYGDFVRVITFDPNYSI---ELCGGTHVNSTGEIGL 692
Query: 770 CTVIGYKSYNHGVRSIKCLTG 790
I S + GVR ++ +TG
Sbjct: 693 FRFISEGSVSAGVRRVEAVTG 713
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+ D ++ F NSGM QFK+ FLG P R+A++QKC+RV GKHNDL G D+YHHT
Sbjct: 28 VAKNDPTLMFNNSGMAQFKDFFLGNGNPPSKRIADTQKCLRVSGKHNDLEEVGFDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FEMLGNWSF DY+K++A + E LT+ LP DR+Y +
Sbjct: 88 MFEMLGNWSFGDYFKKEALAWSWELLTE-VYKLPKDRIYVS 127
>gi|392390660|ref|YP_006427263.1| alanyl-tRNA synthetase [Ornithobacterium rhinotracheale DSM 15997]
gi|390521738|gb|AFL97469.1| alanyl-tRNA synthetase [Ornithobacterium rhinotracheale DSM 15997]
Length = 872
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 240/786 (30%), Positives = 380/786 (48%), Gaps = 96/786 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IRS FLD+F ++ H +V S+PIV D ++ F N+GM QFK+ FLG + Y R
Sbjct: 2 MKSNEIRSKFLDFFA-SKKHEIVPSAPIVLKDDPTLMFTNAGMNQFKDFFLGHQQSKYLR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G+D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 61 IADTQKCLRVSGKHNDLDDVGKDTYHHTMFEMLGNWSFGDYFKKEAIAWAWELLTEV-YK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ +++Y T F G + G P D+E D W E + I K NFWEMG++GPCG
Sbjct: 120 IDKNQIYVTVFEGDKEDGTPFDQEAYDCWKE-HIDSARILNGNKKDNFWEMGASGPCGPC 178
Query: 192 SEIHYDMK----GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + VN D +IE+WN+VF+ R + + L +DTG+
Sbjct: 179 SEIHVDIRPLEERQKVDGKTLVNKDHPQVIEVWNLVFMEFNRKADGKLEKLPAKNVDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL ILQ KTS YDTD+F L++ +E++SG K YG+ T D + R++ D+
Sbjct: 239 GFERLCMILQGKTSNYDTDIFAGLIKQLEQISGVK-YGQDEKT------DIAIRVIVDHV 291
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R ++ A+AD P + + + + F + + + +L + + +G+ +P
Sbjct: 292 RAVSFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLNLKTEFIYKLVNTLKDEMGEAFP 351
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ + I+ ++ EE F +KT L G+ L
Sbjct: 352 ELEKQYDVIKNVIKEEESSF--------------LKT--------------LDNGLLILD 383
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+A ++SG AF LYDTYG ++ Q + A K +++ FE++L + K+RSK
Sbjct: 384 SMIASVKD-NKLSGAKAFELYDTYGFPFDLTQLIVAEKGISVDEAEFEKELAKQKQRSKN 442
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A+ D ++ ++ + F D+ V + I
Sbjct: 443 AASLKTDDWVVL-------------------SDEEEQAFVGYDSTEVEVKI--------- 474
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
+++ + ++ + L+F+ T YA +GGQ+ D G +N +V I
Sbjct: 475 --VKYRK-------VESNKKTFYQLVFNVTPFYAESGGQVGDKGTLIASNGE----RVNI 521
Query: 606 GELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-T 664
+ VH V + V +R M H+ +HLL+ ALR++L T
Sbjct: 522 IDTKKENNLSVH---VAEELPADVNAQFKAVVAKDLRQNTMANHSATHLLHQALRQILGT 578
Query: 665 CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFL 724
QK +V + DFS + + LS + + VE+++N+ I ++ + E
Sbjct: 579 HVEQKGSKVDAKNLRFDFSHF-KKLSPEEILEVEQFVNEKIKEKIALQEFRSIPKEEALA 637
Query: 725 THLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRS 784
+ GE Y D V LI + S+E C GTHV NT I ++ + G+R
Sbjct: 638 KGAMALFGEKYGDKVRLIQFGE-----SKELCGGTHVPNTADIWYFKIVNESAVAAGIRR 692
Query: 785 IKCLTG 790
I+ +TG
Sbjct: 693 IEAITG 698
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 63/84 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ FLG + Y R+A++QKC+RV GKHNDL G+D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDFFLGHQQSKYLRIADTQKCLRVSGKHNDLDDVGKDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTK 905
LGNWSF DY+K++A A E LT+
Sbjct: 93 LGNWSFGDYFKKEAIAWAWELLTE 116
>gi|344202139|ref|YP_004787282.1| alanyl-tRNA synthetase [Muricauda ruestringensis DSM 13258]
gi|343954061|gb|AEM69860.1| alanyl-tRNA synthetase [Muricauda ruestringensis DSM 13258]
Length = 870
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 250/798 (31%), Positives = 384/798 (48%), Gaps = 111/798 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ +R+ FL++F + H +V S+P+V D ++ F N+GM QFK FLG + R
Sbjct: 1 MTSQEVRNQFLNFF-KEKNHKIVPSAPMVMKDDPTLMFTNAGMNQFKEYFLGNSVPKSKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ ++QKC+RV GKHNDL G+D+YHHT FEMLGNWS DY+K++A A E LT+
Sbjct: 60 LTDTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSIGDYFKKEAIAWAWELLTE-VFK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ + LY + F GS+ GLP D+E D+W + VP + I K K NFWEMG GPCG
Sbjct: 119 IDKESLYVSVFEGSEDDGLPLDQEAYDLWKAI-VPENRIIKGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMK----GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + + VN D ++EIWN+VF+ R + ++ PL + +IDTG+
Sbjct: 178 SEIHVDIRPKEEKQKVDGASLVNQDHPQVVEIWNLVFMQFNRKANGSLEPLPEKHIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ K S YDTD+F PL+ +E ++G K YG+ T D + R+++D+
Sbjct: 238 GFERLCMVLQGKQSNYDTDVFTPLIREVEIITGKK-YGKDEQT------DIAIRVVADHV 290
Query: 308 RMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + ++AD P T + + + F + L + E +G +P
Sbjct: 291 RAVAFSIADGQLPSNTGAGYVIRRILRRAIRYGFTFLDTNKPFIYRLVKVLGEQMGKAFP 350
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E+++ I+ ++ EE F + LEQ GLVL +
Sbjct: 351 ELKEQYQLIENVIKEEESSFLST-----------------LEQ-------GLVLLDSVIN 386
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
++D + I+GD AF LYDT+G ++ + K L + FE+ L K+RS+A
Sbjct: 387 S--SKDKT---IAGDKAFELYDTFGFPIDLTALILEEKGYQLDTKGFEKALKAQKDRSRA 441
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
+ + D +++ +TD + ++ YD+ L+ N+ +
Sbjct: 442 ASEVSKDDWNVL------LTDAEQEF-IGYDS---------LEANVKLV----------- 474
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
R S D Q L+F+ T Y GGQ+ D G V Y+ +T
Sbjct: 475 -KYRKVTSKKEGDQYQ--------LVFNLTPFYPEGGGQVGDKGYLEAPNGDVTYIIDTK 525
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+EN +IVHF + +V+ + V+ R R C HT +HLL+
Sbjct: 526 REN------------NEIVHFAKSLPK-EVSGTFKAVVDEKQRWRTAC--NHTATHLLHQ 570
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL T QK V S DFS + + L+V+ + VE ++N I + ++
Sbjct: 571 ALREVLGTHVEQKGSAVHSKYLRFDFSHFSK-LTVEELRKVENFVNARIDGHLPLEENRN 629
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + GE Y D V I S E C GTHV NT I ++
Sbjct: 630 VPMKEAMEQGAMALFGEKYGDTVRTIRFGQ-----SIELCGGTHVKNTADIWHFKIVSEG 684
Query: 777 SYNHGVRSIKCLTGDSSK 794
+ G+R I+ +T D+ K
Sbjct: 685 AVAAGIRRIEAITSDAVK 702
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 59/84 (70%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG + R+ ++QKC+RV GKHNDL G+D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEYFLGNSVPKSKRLTDTQKCLRVSGKHNDLEEVGKDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTK 905
LGNWS DY+K++A A E LT+
Sbjct: 92 LGNWSIGDYFKKEAIAWAWELLTE 115
>gi|392967335|ref|ZP_10332753.1| alanyl-tRNA synthetase [Fibrisoma limi BUZ 3]
gi|387844132|emb|CCH54801.1| alanyl-tRNA synthetase [Fibrisoma limi BUZ 3]
Length = 885
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 273/809 (33%), Positives = 392/809 (48%), Gaps = 130/809 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR FLD+F + + H +V S+P+V D ++ F NSGM QFK+ FLG P R
Sbjct: 1 MTSHEIRRHFLDFFRSKE-HLIVPSAPLVAKNDPTLMFNNSGMAQFKDFFLGNGTPPSKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 VADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEAIAWAWELLTEV-YK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY + F G ++ G+P D+E D+W + V D I K NFWEMG TGPCG
Sbjct: 119 LPKDRLYVSVFQGDERDGVPFDQEAFDLWKPI-VGEDRIIYGNKKDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ + P L VNAD ++EIWN+VF+ R + ++ PL ++DT
Sbjct: 178 SEIHVDLRPQAEVEQKPGKEL--VNADHPQVVEIWNLVFMQFNRKADGSLEPLPARHVDT 235
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL +Q K S YDTD+F + IE++SG + YG T+ + R+++D
Sbjct: 236 GMGFERLCMAIQGKLSNYDTDVFWGTIGVIEELSG-RSYGEGGMTA------VAMRVIAD 288
Query: 306 YSRMITVALADNMFPDATAKLRNVVRDA-----------LLISEDVFKVKQGKLVKELSY 354
+ R ++ A+AD + P + AK V+R L ++E KLV L+
Sbjct: 289 HIRAVSFAIADGLVP-SNAKAGYVIRRILRRAIRYGYSYLNLTEPFMT----KLVPTLAM 343
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
A DV+PE+ + + ++ EE F +
Sbjct: 344 QFA----DVFPELNAQRDFVATVIREEEIAF--------------------------LRT 373
Query: 415 PGLVLG-VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
G LG + + QL + T I G+ F L DT+G ++ +A K L + E F+
Sbjct: 374 LGTGLGRLDQIIGQLTSEGKDT-IPGETVFELNDTFGFPADLTALIAREKGLKIDEEGFQ 432
Query: 474 QKLNELKERSKAKAASNVPD-IDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
Q L E K RS+ AAS+ D ++L + S+R F D
Sbjct: 433 QALAEQKARSRKDAASSAGDWVELAE--------------------SERTEFVGYDQPEA 472
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
I I++ + IQ + V ++ DKT YA +GGQI D G
Sbjct: 473 YAQI-----------IKYRK-------IQNKQGTQVQVVLDKTPFYAESGGQIGDTGTLQ 514
Query: 593 LTNTTQENGKVEIGELASLEGKI-----VHFGNVVSSFKVTPGLTSRVEVDA-----RMR 642
L G IG L L+ K +H V + LT +V A R
Sbjct: 515 LF-----AGGESIGTLTVLDTKKENDLPIHIVQDVRG--IDDLLTEADQVYASINVERRE 567
Query: 643 LGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYI 701
L C H+ +HLL+AALR VL T QK V D DFS + + ++ + +A VE+ +
Sbjct: 568 LTCSN-HSATHLLHAALREVLGTHVAQKGSYVGPDALRFDFSHF-QKVTDEQLAEVERIV 625
Query: 702 NDVIANQVQVD-RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
N+ I +++D +R++ E L + + GE Y D V +I +V E C GTH
Sbjct: 626 NEKIREDIRLDEKRNVPIEEAKELGAMALF-GEKYGDFVRVITFDPDYSV---ELCGGTH 681
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLT 789
V +TGHI S + GVR ++ T
Sbjct: 682 VPSTGHIGLFKFTSEGSVSTGVRRVEAKT 710
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK+ FLG P RVA++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFNNSGMAQFKDFFLGNGTPPSKRVADTQKCLRVSGKHNDLEDVGFDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ LP DRLY +
Sbjct: 92 LGNWSFGDYFKKEAIAWAWELLTE-VYKLPKDRLYVS 127
>gi|359298897|ref|ZP_09184736.1| alanyl-tRNA synthetase [Haemophilus [parainfluenzae] CCUG 13788]
Length = 874
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 263/819 (32%), Positives = 399/819 (48%), Gaps = 135/819 (16%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR SFLD+F +++GHT+V+SS +VP D ++ F N+GM QFK+VFLG PY R
Sbjct: 3 TTSEIRQSFLDFF-HSKGHTVVESSSLVPENDPTLLFTNAGMNQFKDVFLGNEKRPYTRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEM+GN+SF DY+K+DA + E+LT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKQDAIKFGWEYLTSPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP ++LY T + D+E +IW E+GVP +HI + G NFW MG
Sbjct: 122 LPKEKLYVTVY--------ETDDEAYNIWHDEVGVPAEHIIRIGDNKGAPYASDNFWAMG 173
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IE+WNIVF+ R + T+ L
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGLPGSP----EEDGDRFIEVWNIVFMQFNRHADGTMEKL 229
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S Y+ D+F L++TI ++ N TDL+
Sbjct: 230 PKPSVDTGMGLERMTAVLQHVNSNYEIDIFQTLIKTIAEL------------LNVTDLNN 277
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSY 354
S R+++D+ R +AD + P + LR ++R A+ ++ K G EL
Sbjct: 278 KSLRVIADHIRSCAYLIADGVVPSNEGRGYVLRRIIRRAVRHG-NILGAK-GAFFYELVP 335
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
+A+++G I + IQ L + E EQF E
Sbjct: 336 TLAKVMGHAGEIISQKQDHIQKTL------------------------KAEEEQFARTLE 371
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
GL L L +LA+ + ++SG++AF LYDTYG ++ ++ + + + + FE
Sbjct: 372 RGLAL----LEDELAKVAN-NQLSGEVAFKLYDTYGFPLDLTADVCRERNIAIDEKGFEA 426
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
++ +ER AKA+SN MD + + + ++ Y+T + T L +N
Sbjct: 427 EMQAQRER--AKASSNFG----MDYNNVIKVEGQTQFK-GYETLNTDATVVALFSN---- 475
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA--- 591
G S++ I+ NA V I D+T Y +GGQ+ D G+
Sbjct: 476 -------------------GESVNEIKSGENAVV--ILDQTAFYGESGGQVGDSGLISSE 514
Query: 592 ---YLTNTTQENGKV--EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCM 646
+ N TQ+ G+V IG+L S S KV G + EV+A+ R
Sbjct: 515 ICNFQVNDTQKYGQVFGHIGQLTS------------GSLKV--GDKVKAEVEAQRRHAIT 560
Query: 647 RAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI 705
H+ +HLL++ALR VL QK V DFS E ++ +A +E+ +N +
Sbjct: 561 LNHSATHLLHSALREVLGNHVAQKGSLVNEQVLRFDFS-QPEAINKAQLAEIERIVNRKV 619
Query: 706 ANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTG 765
+QV M + + GE Y D V ++D+SD S E C GTHV TG
Sbjct: 620 RENIQVLIEQMDIESAKAKGAMALF-GEKYGDVVRVVDMSD----FSIELCGGTHVNQTG 674
Query: 766 HIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
I + + GVR ++ +TG+++ A + N + ++
Sbjct: 675 DIGLFKITSEGAVAAGVRRVEAVTGENALAWLHNLQQIA 713
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLG PY R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPENDPTLLFTNAGMNQFKDVFLGNEKRPYTRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+K+DA + E+LT P + LP ++LY T
Sbjct: 89 FFEMMGNFSFGDYFKQDAIKFGWEYLTSPQWLGLPKEKLYVT 130
>gi|254510259|ref|ZP_05122326.1| alanyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
gi|221533970|gb|EEE36958.1| alanyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
Length = 890
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 255/795 (32%), Positives = 373/795 (46%), Gaps = 102/795 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FL+YF QGH +V SSP+VP D ++ FVNSGM QFKN+F G+ Y R SQ
Sbjct: 7 IRSTFLNYFAK-QGHEVVASSPLVPRNDPTLMFVNSGMVQFKNLFTGVETRDYQRATTSQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K +A A E +TK + R
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKPEAIPFAWELITK-EFGIDKSR 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHY 196
L T + D+E +IW ++GVP D I + NFW+MG TGPCG +EI Y
Sbjct: 125 LLTTVY--------HTDDEAFEIWKKVGVPEDRIIRIATSDNFWQMGPTGPCGPCTEIFY 176
Query: 197 D-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
D G P SA D + IEIWNIVF+ +++ +V L IDTG+G ER
Sbjct: 177 DHGDHIWGGPPGSA----EEDGDRFIEIWNIVFMQNEQFEDGAMVELDMQSIDTGMGLER 232
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
+ +LQ YDTDLF L+E + PYG D + +R+++D+ R +
Sbjct: 233 IGALLQGSHDNYDTDLFKTLIEASADATNVDPYG---------DQNVHHRVIADHLRSTS 283
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
+AD + P + LR ++R A+ A +LG P +
Sbjct: 284 FLIADGVMPSNDGRGYVLRRIMRRAM--------------------RHAHLLGAKDPIMY 323
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+ + ++G + + L +A + L+ + +Q L G+K L +L
Sbjct: 324 QLVPTLVQLMGAQ---YSELGQAQPLIEETLLLEETRFKQT-------LDRGLKLLDDEL 373
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAA 488
A P+ + G+ AF LYDTYG ++ Q+ K T+ + F+ + E K +++A A
Sbjct: 374 AGLPAGDPLPGEAAFKLYDTYGFPLDLTQDALREKGRTVDTDGFDAAMAEQKAKARAAWA 433
Query: 489 SNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHA 547
+ D + F V D D+ YDT L +D
Sbjct: 434 GSGESAD--QVVWFDVLDTAGATDFLGYDTEKAEGQIAAL--------------VVD--- 474
Query: 548 IRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGE 607
G +DSI+ + W+ + ++T Y AGGQ+ D G + + +VE
Sbjct: 475 ------GVLVDSIEQGGSGWI--VVNQTPFYGEAGGQVGDTGEIRRLDARDDVARVEDTR 526
Query: 608 LASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CT 666
+ EGK+ V ++ G +EVD R H+ +HLL+ ALR L
Sbjct: 527 KFA-EGKVYAHKVTVDHGAISKGDAVELEVDHARRTAIRANHSATHLLHEALRETLGDHV 585
Query: 667 YQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTH 726
Q+ SD DFS + + L++D + VE+ +N I V+ R M + L
Sbjct: 586 AQRGSLNASDRLRFDFS-HSKALTLDEMKKVEREVNAFIRQNSTVETRIMTPDDARELGA 644
Query: 727 LTVIPGEIYPDDVILIDIS--------DKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ GE Y D+V ++ + D E S E C GTHV TG I + V+G +
Sbjct: 645 QALF-GEKYGDEVRVVSMGKATTGKGQDGE-TWSIELCGGTHVRQTGDIGTFVVLGDSAS 702
Query: 779 NHGVRSIKCLTGDSS 793
+ GVR I+ LTGD +
Sbjct: 703 SAGVRRIEALTGDEA 717
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 60/88 (68%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ FVNSGM QFKN+F G+ Y R SQKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFVNSGMVQFKNLFTGVETRDYQRATTSQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTK 905
FFEMLGN+SF DY+K +A A E +TK
Sbjct: 89 FFEMLGNFSFGDYFKPEAIPFAWELITK 116
>gi|393786683|ref|ZP_10374815.1| alanyl-tRNA synthetase [Bacteroides nordii CL02T12C05]
gi|392657918|gb|EIY51548.1| alanyl-tRNA synthetase [Bacteroides nordii CL02T12C05]
Length = 872
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 263/793 (33%), Positives = 381/793 (48%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K R SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKETRDSFKNFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYHR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKQEAISWAWEYLVD-VLK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEYLYATVFEGSPEEGLERDNEAASYWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ L IDT
Sbjct: 179 SEIHIDLR--PAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEALPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P+++ I +++G + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPMIKAIAQMAGVE-YGKD------KQQDVAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I E +G+
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLI-ENMGE 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ ++ EE F LR L G++
Sbjct: 349 AYPELIAQKGLIEKVIKEEEEAF--LRT--------------------------LETGIR 380
Query: 423 YLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K + A+ TEISG AFTLYDT+G ++ + + +T+ E F+ ++ + K
Sbjct: 381 LLDKTMADAKASGKTEISGKDAFTLYDTFGFPLDLTELILRENNMTVNIEEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA V D + LK T + YDY Y+ + RY
Sbjct: 441 QRARNAAA--VETGDWIILKEG--TSEFVGYDYTEYEVSILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
I+ ++ ++ D T YA +GGQ+ D GV E
Sbjct: 481 -------------------QIKQKNQTLYQIVLDSTPFYAESGGQVGDTGV-----LVSE 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+EI + +HF + P + VD R C H+ +HLL+ AL
Sbjct: 517 FETIEIIDTKKENNLPIHFTKKLPEHLEAPMMAC---VDTDKRAACAANHSATHLLDEAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V + DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHVEQKGSLVTPESLRFDFSHF-QKVTDEEMRRVEHLVNAKIRANIPLKEYRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y D V +I S E C G HV TG I +I S
Sbjct: 633 IEEAKELGAIALF-GEKYGDRVRVIQFGS-----SIEFCGGIHVAATGSIGMIKIISESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAYTG 699
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYHRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKQEAISWAWEYL 114
>gi|116749953|ref|YP_846640.1| alanyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
gi|205830235|sp|A0LLA3.1|SYA_SYNFM RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|116699017|gb|ABK18205.1| alanyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
Length = 885
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 261/794 (32%), Positives = 369/794 (46%), Gaps = 99/794 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR +FLD+F +GH++VKSS ++P+ D S+ F N+GM QFK FLG PY R
Sbjct: 1 MKASEIRKAFLDFFAQ-RGHSVVKSSSVIPHDDPSLLFTNAGMVQFKRTFLGEEKRPYNR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A SQKC+R GGKHNDL GR + HHTFFEMLGN+SF DY+K DA A FLT+ +
Sbjct: 60 AATSQKCMRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKEDAVEYAWRFLTED-MG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP ++LY T G + L DEE R W +P D I K NFW MG TGPCG
Sbjct: 119 LPREKLYATIHEGDSEMRLGPDEEARGFWARY-LPADRILTFPTKDNFWSMGDTGPCGPC 177
Query: 192 SEIHYDMK-----GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEI D G+P R D + +E+WN+VF+ R T+ PL K IDTG
Sbjct: 178 SEILIDQGAHVGCGKPD---CRPGCDCDRFLELWNLVFMQFNRKEDGTMEPLPKPSIDTG 234
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ER+ ++Q S YDTDLF P+ I ++SG + YG + D S ++++D+
Sbjct: 235 MGLERVAAVIQKVPSNYDTDLFAPMRAKIAELSGYR-YG------TDPEKDVSVKVIADH 287
Query: 307 SRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLV-------KELSYNIAEI 359
R + D P N R +L ++ G+ + E++ + E
Sbjct: 288 GRAAAFLIGDGALPS------NEGRGYVLRRVLRRALRHGRFLGLDRPFLSEVAVAVMES 341
Query: 360 LGDVYPEIQDSINKI-QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
+ D YPE+ +S N I ++IL EE E+FN + GL
Sbjct: 342 MQDAYPELLESRNFITRVILNEE-------------------------ERFNETLDNGLR 376
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
L ++ ++L RD I G + F LYDTYG +II ++A + F + +
Sbjct: 377 L-LQNEIRRL-RDEGAGTIPGALIFKLYDTYGFPIDIITDMARDLDFKVDEAGFADLMEK 434
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
KE+S+ + + ++ YDT S + T L
Sbjct: 435 QKEQSRMHWKGSGEREVSEAYRQLSAEGVSTRF-VGYDTLSAQSTIAAL----------- 482
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
D A+ A +G ++ + E T Y AGGQ+ D GV
Sbjct: 483 ---VRDGQAVEEAPAGTDVEVVTSE-----------TPFYGAAGGQVGDQGV-----IVG 523
Query: 599 ENGKVEIGELASLEGK-IVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+ +V + + L G IVH G V S ++ G T R+EVD +R HT +HLL++
Sbjct: 524 PSSRVIVSDTLKLPGDLIVHVGKVESG-RLRVGETVRLEVDQALRGDTALHHTATHLLHS 582
Query: 658 ALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
LRRVL Q V D DF+ + +S D +A +E+ +N+ I + R M
Sbjct: 583 VLRRVLGDHVKQAGSMVAPDRLRFDFTHFA-AISRDELAEIERLVNEQIRVNRDLQVREM 641
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
E T + E Y D V +++I SRE C GTH TG I V
Sbjct: 642 NLDE-ALKTGAMALFEEKYGDRVRMVEIPG----FSRELCGGTHTHRTGDIGLFVVTQEM 696
Query: 777 SYNHGVRSIKCLTG 790
S GVR I+ L G
Sbjct: 697 SIASGVRRIEALAG 710
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP+ D S+ F N+GM QFK FLG PY R A SQKC+R GGKHNDL GR + HHT
Sbjct: 28 IPHDDPSLLFTNAGMVQFKRTFLGEEKRPYNRAATSQKCMRAGGKHNDLENVGRTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K DA A FLT+ + LP ++LY T
Sbjct: 88 FFEMLGNFSFGDYFKEDAVEYAWRFLTE-DMGLPREKLYATI 128
>gi|357061499|ref|ZP_09122249.1| alanyl-tRNA synthetase [Alloprevotella rava F0323]
gi|355373871|gb|EHG21178.1| alanyl-tRNA synthetase [Alloprevotella rava F0323]
Length = 874
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 251/796 (31%), Positives = 381/796 (47%), Gaps = 101/796 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR S+ +F ++GHT+V S+P+V D ++ F N+GM Q+K++ LG T P PR
Sbjct: 1 MTANEIRESYKKFF-ESKGHTIVPSAPMVVKDDPTLMFTNAGMNQWKDIILG-TREPEPR 58
Query: 72 V-ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K +A A E+L
Sbjct: 59 RRTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEEAIDYAWEYLVDVLH 118
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
P D LY T F GS + GL D+E W + VP DHI NFWEMG TGPCG
Sbjct: 119 LDPKD-LYVTVFEGSKEEGLERDDEAASFWAK-HVPADHIINGNKHDNFWEMGDTGPCGP 176
Query: 191 SSEIHYDMKG--EPSSALAR--VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH D + E + R VN D +IEIWNIVF+ + R + ++ PL + IDTG
Sbjct: 177 CSEIHVDSRSAEEKAKVPGRELVNKDNPQVIEIWNIVFMQYNRKADGSLEPLPMHVIDTG 236
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV +LQ K S YDTD+F P+++ E++SG FT ++D + R+++D+
Sbjct: 237 MGFERLVRMLQGKNSNYDTDIFQPIIKKEEQLSG-------FTYGKEENVDVAMRVVADH 289
Query: 307 SRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R I ++AD P A +R ++R A+ + KQ + +L + +G
Sbjct: 290 LRAIAFSIADGQLPSNAKAGYVIRRILRRAVRYAYTFLNQKQA-FIYQLIPTFVKEMGGA 348
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
YPE+ I ++ EE F LR A N+++ G+
Sbjct: 349 YPELTAQQELITRVIKEEEDSF--LRTLATG--------------INLLD------GLIR 386
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
TK D + G AFTL+DTYG ++ + + A + L E F ++ + KER+
Sbjct: 387 ETKAAGSDT----LDGAKAFTLFDTYGFPFDLTELICAEQGLKTDEEGFNAEMQKQKERA 442
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+ AA ++ D +DK+ +G
Sbjct: 443 RNAAA-----VETGDWVVLREGEDKF--------------------------VGWDETEA 471
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
D H +R+ + +Q + + L+ D T YA GGQ+ D G+ N T V
Sbjct: 472 DCHILRYRK-------VQQKKQTYYELVLDTTPFYAEMGGQVGDKGILRSANET-----V 519
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
+I + +H + P R +D R HT +HL++ A R VL
Sbjct: 520 QIFDTKRENNLPIH---LTKQLPENPAADFRAVIDLEARRSSEANHTATHLIDQAFREVL 576
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRHMRASEL 721
+ QK V D DFS + + ++ + + VE+ +N I + + D R++ E
Sbjct: 577 GSHVEQKGSLVTPDYLRFDFSHF-QKMTPEELRKVEQIVNRRIREDIPLQDHRNVPMEEA 635
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
+ + + GE Y D+V ++ + S E C G H +TG + ++ S G
Sbjct: 636 KRMGAIALF-GEKYGDEVRVVQFGN-----SVEFCGGCHAKSTGRLGLLRIVSESSVAAG 689
Query: 782 VRSIKCLTGDSSKAAV 797
VR I+ LTG +++ ++
Sbjct: 690 VRRIEALTGKAAEESI 705
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRV-ANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
D ++ F N+GM Q+K++ LG T P PR +SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 32 DPTLMFTNAGMNQWKDIILG-TREPEPRRRTDSQKCLRVSGKHNDLEEVGHDTYHHTMFE 90
Query: 881 MLGNWSFNDYYKRDACRMALEFL 903
MLGNWSF DY+K +A A E+L
Sbjct: 91 MLGNWSFGDYFKEEAIDYAWEYL 113
>gi|317154429|ref|YP_004122477.1| alanyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
gi|316944680|gb|ADU63731.1| alanyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
Length = 879
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 248/795 (31%), Positives = 383/795 (48%), Gaps = 100/795 (12%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
+ IR FL+YF H +V+SSP++P D ++ F N+GM QFK +FLG Y R
Sbjct: 3 AAEIRQRFLEYF-QENNHAIVESSPLIPKDDPTLLFTNAGMVQFKRLFLGQEKREYSRAT 61
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
SQKC+RVGGKHNDL GR + HHTFFEMLGN+SF DY+K DA R +FLT+ + LP
Sbjct: 62 TSQKCLRVGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKEDAIRYCWQFLTEE-LKLP 120
Query: 134 LDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSS 192
DRLY T + D+ G ++W ++ GVP + I + G K NFW MG TGPCG S
Sbjct: 121 KDRLYITIYKDDDEAG--------ELWQKVAGVPIERIYRLGEKDNFWSMGDTGPCGPCS 172
Query: 193 EIHYDMKGE-----PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
E+H+D +GE P + + + DR +EIWN+VF+ + + T PL + IDTG+
Sbjct: 173 EVHFD-QGEHVGCGPECGIGKCDCDR--YLEIWNLVFMQYDQAEDGTRTPLPRPSIDTGM 229
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ER+ + Q S Y+TDLF ++ +++G K ++DT+ ++++D+S
Sbjct: 230 GLERIAAVCQGVASNYETDLFQSIIRYTAELAGVK-------YRENQEIDTALQVIADHS 282
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I + D + P + LR ++R A + + + + L K S + + +G +
Sbjct: 283 RAIAFLIPDQVLPSNEGRGYILRRLIRRACRFGK-LMGLTEPFLWKTAS-KVVDDMGGHF 340
Query: 365 PEIQDSIN-KIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
E++DS I+++ GEE L K GL +
Sbjct: 341 SELRDSKEFMIEVVRGEEEGFAKTLDK-------------------------GLDMLEAE 375
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + A +I + GD AF LYDTYG +I++++A + +++ F+ + E K RS
Sbjct: 376 LAELTAAKAAI--VPGDTAFRLYDTYGFPIDIVRDVAERQGMSVDEPGFDALMQEQKSRS 433
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
KA A D D+ + H L+ + G +
Sbjct: 434 KA-AWKGSGDKDVAAVFH-----------------------TLLEQGITSGFTGYETMA- 468
Query: 544 DKHAIRHARS--GASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
D+ I H S GA ++ + WV + T Y +GGQ D G +G
Sbjct: 469 DQSEITHVLSPAGAVVERLAAGDTGWV--VTRSTPFYGESGGQTGDTG-----EIAASSG 521
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+ + + + ++ ++ PG + + VD RL MR HT +HLL+AAL++
Sbjct: 522 RGAVTDTVKPSQSLTAHKVEMAQGELKPGNSVFLTVDRGQRLATMRNHTVTHLLHAALQK 581
Query: 662 VLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL Q V D DF+ + + L+V+ + VE +N I + + V R M + E
Sbjct: 582 VLGDHARQAGSLVGPDRLRFDFT-HIKGLTVEEIGRVETLVNQSILDAIPVSREVM-SIE 639
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
T + GE Y D V +I++ +S E C GTH+ NTG S ++
Sbjct: 640 QAQTKGATALFGEKYGDTVSVIEVPG----VSMEFCGGTHLDNTGIAGSFVIVSESGVAA 695
Query: 781 GVRSIKCLTGDSSKA 795
G+R I+ TG ++ A
Sbjct: 696 GIRRIEAATGGNAIA 710
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK +FLG Y R SQKC+RVGGKHNDL GR + HHT
Sbjct: 28 IPKDDPTLLFTNAGMVQFKRLFLGQEKREYSRATTSQKCLRVGGKHNDLENVGRTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K DA R +FLT+ + LP DRLY T
Sbjct: 88 FFEMLGNFSFGDYFKEDAIRYCWQFLTE-ELKLPKDRLYITI 128
>gi|374386958|ref|ZP_09644451.1| alanine-tRNA ligase [Odoribacter laneus YIT 12061]
gi|373223004|gb|EHP45361.1| alanine-tRNA ligase [Odoribacter laneus YIT 12061]
Length = 877
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 258/804 (32%), Positives = 382/804 (47%), Gaps = 112/804 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR FLD+F ++ HT+V S+P+V D ++ F N+GM QFK++ LG Y R
Sbjct: 1 MKSAEIRQKFLDFF-KSKSHTIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNVNTKYKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K +A A EFLT+ +
Sbjct: 60 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEEAIAYAWEFLTE-VMH 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY T F G + GL DE+ R WL +P D I K NFWEMG GPCG
Sbjct: 119 LEKDRLYATVFEGDKEDGLEADEDARKFWLRY-LPEDRILYGNKKDNFWEMGDMGPCGPC 177
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SE+H D++ E L VN D +IEIWN+VF+ R + ++ L ++DTG+
Sbjct: 178 SELHIDLRPEEERKLKPGRELVNKDNPLVIEIWNLVFMQFNRKADGSLENLPHTHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +Q KTS YDTD+F P+++ I +SG K YG T D + R+++D+
Sbjct: 238 GFERLCMAVQGKTSNYDTDVFTPIIDKIAALSGLK-YGEGEET------DIAMRVVADHL 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++ D P A +R ++R A+ + K + + L + E++G Y
Sbjct: 291 RTIAFSITDGQLPSNVKAGYVIRRILRRAVRYAYTYLDQKDAFMYR-LVPVLIEVMGKHY 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ I+ ++ EE F LR L G+K L
Sbjct: 350 PELSTQQELIEKVIREEENAF--LRT--------------------------LDKGIKLL 381
Query: 425 TKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+ +A + + G++AF LYDTYG ++ + + L + F+ +L K R
Sbjct: 382 DRIIATTKSEDFLTVPGNVAFELYDTYGFPLDLTELILREHGLVVNRREFKAELEAQKAR 441
Query: 483 SKAKAASNVPD-IDLMDLKHFPVTDDKYK---YDY-HYDTNSKRYTFPCLDTNLVGIVIG 537
S++ A N D I+L++ DD+ + YDY + RY
Sbjct: 442 SRSAATVNTDDWIELLN-------DDEQEFVGYDYTGMEVKIARY--------------- 479
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
R S + L H ++F+ T Y GGQ+ D G +L
Sbjct: 480 -----------RKVMSKGKV----LYH-----IVFNITPFYGEGGGQVGDTG--WLCGKE 517
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+ K+ + + G +H V + +VDA R HT +HLL+
Sbjct: 518 E---KIRVIDTKKENGLTIH---VTEQLPADLTQSFMAQVDAHRRELIANNHTATHLLDH 571
Query: 658 ALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR-RH 715
ALR VL QK V + DFS + + ++ + + V +N +I + ++ R
Sbjct: 572 ALREVLGAHVEQKGSYVGEERLRFDFSHF-QKVTEEELRRVAAIVNRLIRQNLTLEEFRS 630
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ +E + + + GE Y D V +I D S E C GTHV TG I ++
Sbjct: 631 IPMTEAQKMGAIAIF-GEKYGDLVRVIKYGD-----SIELCGGTHVRATGQIGFFKIMSE 684
Query: 776 KSYNHGVRSIKCLTGDSSKAAVEN 799
S + GVR I+ +T D ++ + N
Sbjct: 685 SSVSAGVRRIEAITADKAEEYIVN 708
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDIILGNVNTKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K +A A EFLT+ + L DRLY T
Sbjct: 92 LGNWSFGDYFKEEAIAYAWEFLTE-VMHLEKDRLYAT 127
>gi|381187503|ref|ZP_09895067.1| alanyl-tRNA synthetase [Flavobacterium frigoris PS1]
gi|379650631|gb|EIA09202.1| alanyl-tRNA synthetase [Flavobacterium frigoris PS1]
Length = 878
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 247/804 (30%), Positives = 380/804 (47%), Gaps = 113/804 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ SK +R FLD+F ++GH +V S+PIV D ++ F NSGM QFK FLG R
Sbjct: 1 MNSKDVRKQFLDFF-QSKGHLIVPSAPIVLKDDPTLMFNNSGMAQFKEYFLGNATPKSTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K +A A EFLT+ +
Sbjct: 60 IADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKEEALPWAWEFLTE-VLK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY + F G++ +P D++ DIW + VP D I K NFWEMG GPCG
Sbjct: 119 LDKDRLYVSVFEGNEAENVPFDQQAFDIWKQF-VPEDRIILGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSAL----ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + A + VNAD ++EIWN VF+ R + ++ L ++DTG+
Sbjct: 178 SEIHIDLRTDEERAAVTGRSLVNADHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-------DTSY 300
GFERL +QN TS YDTD+F PL+E +E+++G K +T++ D+ + +
Sbjct: 238 GFERLCMAMQNVTSNYDTDVFTPLIEKVEQITGLK-----YTSNEVKDISEEQNKTNIAI 292
Query: 301 RMLSDYSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL 360
R++ D+ R + A+AD P T V +L + + + Y + E+L
Sbjct: 293 RVIVDHIRAVAFAIADGQLPSNTGA--GYVIRRILRRAIRYGFTFLNIKEAFIYQLVEVL 350
Query: 361 ----GDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
G+ +PEI+ N + ++ EE F LR L+Q
Sbjct: 351 ADQMGEFFPEIKSQQNLVTNVIREEEASF--LRT---------------LDQ-------- 385
Query: 417 LVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKL 476
G++ L +A E++G AF LYDT+G K++ + + L L F+ +
Sbjct: 386 ---GLQLLENVIAETKG-NEVAGAKAFELYDTFGFPKDLTALILRERGLELDEAGFDVAM 441
Query: 477 NELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
E K RS+A + + D ++ P + + ++ +K +D+ G++
Sbjct: 442 QEQKARSRAASEISTEDWSVL----IPGNVETFVGYDQTESEAKITRIRKVDSKKDGVL- 496
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
++ D + Y GGQI D G N
Sbjct: 497 -------------------------------YQIVLDNSPFYPEGGGQIGDKGTLVSANE 525
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
T ++I + I+HF + V ++V D +R + H+ +HL++
Sbjct: 526 T-----IQIIDTKKENNLILHFTKQLPE-NVNASFIAKVNTD--LRAATAKNHSATHLMH 577
Query: 657 AALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
ALR VL T QK V DFS + + ++ + + VE ++N I Q+ + R
Sbjct: 578 LALRTVLGTHVEQKGSLVNPKNLRFDFSHFAK-VTDEELQQVEDFVNARIQEQIALIERR 636
Query: 716 MRASELPFLTHL----TVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
++PF + + GE Y D V I + S E C G HV NT I
Sbjct: 637 ----DIPFAQAVEEGAMALFGEKYGDHVRAIKFGE-----SMELCGGIHVQNTADIWYFK 687
Query: 772 VIGYKSYNHGVRSIKCLTGDSSKA 795
++ + G+R I+ +TGD+ K
Sbjct: 688 IVSEGAVAAGIRRIEAITGDAVKG 711
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK FLG R+A++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFNNSGMAQFKEYFLGNATPKSTRIADTQKCLRVSGKHNDLEDVGFDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K +A A EFLT+ + L DRLY +
Sbjct: 92 LGNWSFGDYFKEEALPWAWEFLTE-VLKLDKDRLYVS 127
>gi|332292251|ref|YP_004430860.1| alanyl-tRNA synthetase [Krokinobacter sp. 4H-3-7-5]
gi|332170337|gb|AEE19592.1| alanyl-tRNA synthetase [Krokinobacter sp. 4H-3-7-5]
Length = 870
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 244/798 (30%), Positives = 374/798 (46%), Gaps = 111/798 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ +R FLD+F ++ HT+V S+P+V D ++ F N+GM FK FLG R
Sbjct: 1 MKSQEVRKQFLDFF-ESKKHTIVPSAPMVLKDDPTLMFTNAGMVPFKEYFLGNATPKNAR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
++++QKC+RV GKHNDL G+D+YHHT FEMLGNWSF DY+K +A A EFLT+ V
Sbjct: 60 LSDTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKEEAIAWAWEFLTE-VVK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ D LY + F G + GL D+E DIW + + D I K NFWEMG+ GPCG
Sbjct: 119 IDKDSLYVSVFEGDKEDGLDRDQEAFDIWKQR-IDEDRIIDGNKKDNFWEMGAQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ A +N D ++EIWN+VF+ + R++ ++V L ++DTG+
Sbjct: 178 SEIHVDIRSAEEKAKVDGKTLINMDHPHVVEIWNLVFMQYNRLADGSLVKLPNQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ S YDTD+F PL+ IE ++ +K N ++D + R+++D+
Sbjct: 238 GFERLCMVLQGVQSNYDTDVFTPLMSEIETITNSK-------CGNDEEIDIAVRVIADHV 290
Query: 308 RMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R ++ ++AD P T + + + F + + +L + + +GD +P
Sbjct: 291 RAVSFSIADGQLPSNTGAGYVIRRILRRAIRYGFTFLDMKEPFIYKLVATLVKQMGDAFP 350
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ N + ++ EE F LR + GL+ L
Sbjct: 351 ELKSQKNLMTNVIREEEASF--LRTL----------------------DKGLL-----LL 381
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ D +SGD AF LYDTYG ++ + + K L L + FE L E K+RS+A
Sbjct: 382 DNVIADTKGDTVSGDKAFELYDTYGFPIDLTALILSEKNLKLDEKGFEAALKEQKDRSRA 441
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
D +++ H D + + L+T +
Sbjct: 442 ATKVETDDWNIL----------------HEDAEEEFVGYDTLETPV-------------- 471
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
I R S +L L+F+ T Y GGQ+ D G V Y+ +T
Sbjct: 472 -KITRYRKTESKKDGELYQ-----LVFNLTPFYPEGGGQVGDKGYLETPNGEVVYIIDTK 525
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+EN I+H + + T G T + VDA+ R HT +HLL+
Sbjct: 526 KEN------------NLIIHLAKNLP--RSTDG-TFKAVVDAKQRSRTAVNHTATHLLHQ 570
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
LR+VL T QK V S DF+ + ++ + + VE ++N I + ++ +
Sbjct: 571 GLRKVLGTHVEQKGSMVHSGNLRFDFAHFSR-VTKEELKEVEDFVNARIRENLSLEEQRG 629
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + GE Y D V I S E C GTHV NTG I +
Sbjct: 630 IPYDQAVQEGAIALFGEKYGDAVRTIRFGK-----SMELCGGTHVKNTGDIWHFKITSEG 684
Query: 777 SYNHGVRSIKCLTGDSSK 794
+ G+R I+ +T D++K
Sbjct: 685 AVASGIRRIEAITSDAAK 702
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM FK FLG R++++QKC+RV GKHNDL G+D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMVPFKEYFLGNATPKNARLSDTQKCLRVSGKHNDLEEVGKDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K +A A EFLT+ V + D LY +
Sbjct: 92 LGNWSFGDYFKEEAIAWAWEFLTE-VVKIDKDSLYVS 127
>gi|340621084|ref|YP_004739535.1| Alanine--tRNA ligase [Capnocytophaga canimorsus Cc5]
gi|339901349|gb|AEK22428.1| Alanine--tRNA ligase [Capnocytophaga canimorsus Cc5]
Length = 878
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 241/799 (30%), Positives = 378/799 (47%), Gaps = 104/799 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FL +F +GH +V S+P+V D ++ F N+GM QFK FLG R
Sbjct: 1 MTSQEIRREFLKFF-EGKGHLIVPSAPMVIKNDPTLMFTNAGMNQFKEYFLGNGKPKSKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G+D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 IADTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKKEAIAWAWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P LY T F GS + +P D+E+ DIW L + D I K NFWEMG GPCG
Sbjct: 119 IPKKNLYVTVFEGSKEDNVPFDQESFDIWKGL-IAEDRILLGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
+EIH D++ E S VN D +IEIWN VF+ R + ++ L ++DTG+
Sbjct: 178 TEIHVDLRSESEKSKISGRDLVNQDHPQVIEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ S YDTD+F P+++ IE+++ K ++ ++ + R+++D+
Sbjct: 238 GFERLCMVLQGVQSNYDTDVFTPIIQRIEEITQHKYIKGNNVSAEEDQINIAIRVIADHI 297
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R ++ A+AD P + + + + F ++ + +L +A +G+V+P
Sbjct: 298 RAVSFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLALQMGEVFP 357
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
EI+ ++ ++ EE F +E+ L+L V
Sbjct: 358 EIEKQQVLVENVIKEEEASF-----------------------LRTLEQGLLMLDV---- 390
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ + S ++SG AF LYDTYG ++ + + K LTL + FE+ L + KERS+A
Sbjct: 391 --MINNISDNQLSGSKAFELYDTYGFPIDLTALILSEKGLTLDEKGFEENLQKQKERSRA 448
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A D ++ DD+ + YDT L IV
Sbjct: 449 AAQVKADDWVIL-------RDDEEEEFIGYDT-------------LEAIV---------- 478
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI--------GVAYLTNTT 597
+++ + + D + L+F+ T Y GGQ D G+ Y+ +T
Sbjct: 479 RLVKYRKVESQKDG------TFYQLVFNVTPFYPEGGGQAGDKGTLQSANGGITYIIDTK 532
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+EN I+H + P + EV R H+ +HLL+
Sbjct: 533 KEN------------NLIIHISETLPDNLNDP---FKAEVHPLGRAFTQANHSATHLLHQ 577
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL T QK V DFS + + L+ + + +E+ +N+ I ++ +
Sbjct: 578 ALREVLGTHVEQKGSLVDLKHLRFDFSHF-QKLTQEEITEIERRVNERIQQKIDLQEHRN 636
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + GE Y D V +I + S+E C GTHV NTG I ++
Sbjct: 637 IPIQQAMDAGAMALFGEKYGDKVRMIQFGE-----SKELCGGTHVKNTGDIWYFKILSEG 691
Query: 777 SYNHGVRSIKCLTGDSSKA 795
+ G+R I+ +T +++ A
Sbjct: 692 AVASGIRRIEAITQEAALA 710
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG R+A++QKC+RV GKHNDL G+D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEYFLGNGKPKSKRIADTQKCLRVSGKHNDLEEVGKDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ +P LY T
Sbjct: 92 LGNWSFGDYFKKEAIAWAWELLTE-VYKIPKKNLYVT 127
>gi|205830249|sp|A5UY81.2|SYA_ROSS1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 905
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 262/815 (32%), Positives = 389/815 (47%), Gaps = 109/815 (13%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP 70
+L S +IR FL +F +GH V SS ++P D ++ F NSGM QFK+ FLGL PY
Sbjct: 3 KLSSAAIREQFLRFF-EERGHVRVPSSSLIPGNDPTLLFTNSGMVQFKDTFLGLEQRPYT 61
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R QKC+RV GKHNDL G HHTFFEMLGN+SF DY+K +A MA E LTK
Sbjct: 62 RATTVQKCLRVSGKHNDLEEVGPSPRHHTFFEMLGNFSFGDYFKSEAIPMAWELLTKV-F 120
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP++RL+FT F G D+ +P D+E +W+ G D + + G K NFW M TGPCG
Sbjct: 121 ELPVERLWFTVFEGDDE--VPPDDEAAQLWVAAGADPDRVLRFGRKDNFWVMADTGPCGP 178
Query: 191 SSEIHYDMKGEPSSALAR-VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
SEI + + + A+ VN+D + +EIWN VF+ +R T+ PL + +DTG+G
Sbjct: 179 CSEITIYIGDDLRAMSAQGVNSDDPNYVEIWNNVFMQFER---STMQPLHRPSVDTGMGL 235
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ER+ ++Q STY+TDLF+PL+E + GA ++ R + YR ++D+SR
Sbjct: 236 ERMAMVMQGVHSTYETDLFIPLIERQLALLGAD------ESTYRARV-APYRAVADHSRA 288
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
+ +AD + P T + LR ++R A+ V K + E+ + E +G VYPE
Sbjct: 289 VAFLIADGVLPGNTGRSYVLRRILRRAVYQGRTVGFEK--PFLAEIVAAVIEQMGAVYPE 346
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+++ + I + E R F LR L G+ L
Sbjct: 347 LRERADFILETVDLEERQF--LRT--------------------------LSGGMSILNS 378
Query: 427 --QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ R T I GD AFTL DTYG ++ Q++AA LT+ +E+++ E ++R +
Sbjct: 379 VIERVRASGSTVIPGDDAFTLKDTYGFPLDLTQKIAAEHGLTVDEAGYERRMEEQRDRGR 438
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT-FPCLDTNLVGIVIGDQVFCI 543
A F + + D R+T + + + G+V Q +
Sbjct: 439 RAA-------------QFKRAAEAEVW-AGIDLPPTRFTGYAAVSGS--GVV---QAIVV 479
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
+ A +G + + D T YA +GGQ+ D GV G+V
Sbjct: 480 AGDQVAEASAGQQVQ-----------IALDSTPFYAESGGQVGDTGV-----LIGPRGRV 523
Query: 604 EIGELAS-LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
+ ++ + G IVH+G VV S V VD+ R MR HT +HLL+ ALR V
Sbjct: 524 RVEDVQRPVPGVIVHYG-VVESGSVMLHDPVDAHVDSGRRAAIMRNHTATHLLHRALRDV 582
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L Q V D DF+ + L+ + + +E+ +N I V + + + +
Sbjct: 583 LGEHAAQAGSLVAPDRLRFDFT-HTRPLTPEQLHEIERRVNAWIRADTPVVWQEL-SYQA 640
Query: 722 PFLTHLTVIPGEIYPDDVILIDI--------------SDKE----NVISREPCCGTHVFN 763
+ GE Y D V ++ I +++E + SRE C GTHV
Sbjct: 641 AIEAGAIALFGEKYGDVVRMVTIGCVNGHDAPSPAALAERELAGFPMCSRELCGGTHVGR 700
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
+G I +I S GVR I+ LTG ++A V+
Sbjct: 701 SGEIGLFRIISESSVAAGVRRIEALTGPEAEAWVD 735
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F NSGM QFK+ FLGL PY R QKC+RV GKHNDL G HHT
Sbjct: 31 IPGNDPTLLFTNSGMVQFKDTFLGLEQRPYTRATTVQKCLRVSGKHNDLEEVGPSPRHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K +A MA E LTK LP++RL+FT
Sbjct: 91 FFEMLGNFSFGDYFKSEAIPMAWELLTK-VFELPVERLWFT 130
>gi|386820933|ref|ZP_10108149.1| alanine--tRNA ligase [Joostella marina DSM 19592]
gi|386426039|gb|EIJ39869.1| alanine--tRNA ligase [Joostella marina DSM 19592]
Length = 872
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 258/804 (32%), Positives = 376/804 (46%), Gaps = 113/804 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FL +F + + H +V S+P+V D ++ F N+GM QFK FLG R
Sbjct: 2 MNSREIRKQFLKFFED-KSHEIVSSAPMVIKDDPTLMFTNAGMNQFKEYFLGNKVPKNQR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
++QKC+RV GKHNDL G+D+YHHT FEMLGNWSF DY+K+DA + A E LT+
Sbjct: 61 ATDTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKKDAIKWAWELLTE-VYK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ D LY T F G+D GLP D++ D W E+ VP I K NFWEMG GPCG S
Sbjct: 120 IDKDILYITVFEGADAEGLPMDQDAYDFWKEI-VPESRIILGNKKDNFWEMGDQGPCGPS 178
Query: 192 SEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ A VN D ++EIWN+VF+ R + ++ L ++DTG+
Sbjct: 179 SEIHVDIRSAEEKAKIPGADLVNQDHPQVVEIWNLVFMEFNRKADGSLEKLPAQHVDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ K S YDTD+F P++ IE ++ +K YG + ++D + R+++D+
Sbjct: 239 GFERLCMVLQGKKSNYDTDVFTPIIREIETITNSK-YGV------KEEIDIAIRVIADHV 291
Query: 308 RMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R ++ A+AD P T + + + F ++ + +L + + + + +P
Sbjct: 292 RAVSFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLDQKEAFIYKLVDTLIKQMHEFFP 351
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ N I ++ EE F LR A GLVL L
Sbjct: 352 ELKKEKNIIINVIREEENSF--LRTLA----------------------QGLVL----LD 383
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ + ISG AF LYDTYG ++ + K L + F+++L + K RS+A
Sbjct: 384 NIIGANTDKV-ISGSKAFELYDTYGFPIDLTALILDEKGFQLDEKGFQEELEKQKNRSRA 442
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
D +++ DD + YDT L+T QV
Sbjct: 443 ATKIETGDWEVL-------IDDPIEEFVGYDT---------LET---------QVRITRY 477
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
+ + G L+F+ T YA GGQ+ D G V Y+ +T
Sbjct: 478 RKVESKKDGELYQ-----------LVFNITPFYAEGGGQVGDKGYLESTNGDVIYIIDTK 526
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+EN I+HF + P R VD + R HT +HLL+
Sbjct: 527 KEN------------NLIIHFSKNLPKNLNDP---FRAVVDEKQRNRTAANHTATHLLHQ 571
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRH 715
ALR VL T QK V S DFS + + S + + VE ++N I Q+ + + RH
Sbjct: 572 ALRSVLGTHVEQKGSMVHSGYLRFDFSHFAKVTS-EELTQVEDFVNARIREQLPLQENRH 630
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
M E + GE Y D V + + S E C GTHV NTG I +
Sbjct: 631 MPYQE-AIKEGAVALFGEKYGDLVRAVKFGE-----SMELCGGTHVANTGDIWHFIITNE 684
Query: 776 KSYNHGVRSIKCLTGDSSKAAVEN 799
+ GVR I+ +T D++K N
Sbjct: 685 SAVAAGVRRIEAITFDAAKEYFAN 708
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG R ++QKC+RV GKHNDL G+D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKEYFLGNKVPKNQRATDTQKCLRVSGKHNDLEEVGKDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K+DA + A E LT+ + D LY T
Sbjct: 93 LGNWSFGDYFKKDAIKWAWELLTE-VYKIDKDILYIT 128
>gi|313207039|ref|YP_004046216.1| alanyl-tRNA synthetase [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|383486351|ref|YP_005395263.1| alanyl-tRNA synthetase [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|312446355|gb|ADQ82710.1| alanyl-tRNA synthetase [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|380461036|gb|AFD56720.1| alanyl-tRNA synthetase [Riemerella anatipestifer ATCC 11845 = DSM
15868]
Length = 867
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 247/794 (31%), Positives = 381/794 (47%), Gaps = 99/794 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR +FLD+F ++ H +V S+PIV D ++ F NSGM QFK+ FLG PR
Sbjct: 1 MTSQQIRQAFLDFF-KSKEHLIVPSAPIVLKDDPTLMFSNSGMTQFKDYFLGYKTPKAPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF +Y+K++A A E LT+
Sbjct: 60 IADTQKCLRVSGKHNDLDDVGRDTYHHTMFEMLGNWSFGNYFKKEAIVFAWELLTEV-YK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F G L D+E + W + D I K NFWEMG +GPCG
Sbjct: 119 IPKENLYVTIFEGDATENLERDQEAYNCWKSY-IAEDRILNGNKKDNFWEMGESGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E S VN D ++E+WN+VF+ R + ++ L ++DTG+
Sbjct: 178 SEIHIDLRSEEEKSKVSGKDLVNQDHPQVVEVWNLVFMEFNRKADGSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F PL+ +E++S K G N D+ + R++ D+
Sbjct: 238 GFERLCMALQGKTSNYDTDVFTPLIAKVEQLSQKKYEG---LLDNEKDI--AIRVVVDHI 292
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++ A+AD P T +R ++R A+ S +K+ L EL + +G +
Sbjct: 293 RAVSFAIADGQLPSNTGAGYVIRRILRRAISYSYRFLDMKEVFLY-ELVAVLKNQMGAFF 351
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PEI+ + ++ EE F +KT E GLV +
Sbjct: 352 PEIEKQEKLVTEVIKEEENSF--------------LKTI----------EHGLVRLENII 387
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ L + + G F LYDTYG ++ + +A K LT+ + F++++ + K+RSK
Sbjct: 388 QETLKKGEKT--LPGAEVFELYDTYGFPADLSRIIAEEKGLTVDEKGFDEEMEKQKQRSK 445
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
+A V Y + L V DQ+
Sbjct: 446 KSSAQKV------------------------------YDWVTLKDETESFVGYDQL---- 471
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
+H + R ++ + + ++F++T YA GGQ+ D G Y+ + E G+ E
Sbjct: 472 EHKVFITR----YRKLENKDGVFYQVVFNQTPFYAEGGGQVGDKG--YIES---EEGQFE 522
Query: 605 IGELASLEGKIVHFGNV--VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
+ L+ K + N+ + P VD+R+R H+ +HLL+ ALR V
Sbjct: 523 V-----LDTKKENNLNISLIKDLPQAPEKEFTAVVDSRLRRNTQANHSATHLLHEALREV 577
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L T QK V +D DFS + + +S + +A VE+ +N I + + +
Sbjct: 578 LGTHVEQKGSFVGADYLRFDFSHFSK-MSDEEIALVEEKVNAKIKENISLQEYRNIPIQE 636
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
+ GE Y D+V +I S+E C GTH +T I ++ S G
Sbjct: 637 ALDKGAMALFGEKYGDNVRMIQFGS-----SKELCGGTHAKSTSEIGLFKIVSESSTAAG 691
Query: 782 VRSIKCLTGDSSKA 795
+R I+ ++ + + A
Sbjct: 692 IRRIEAISSEKANA 705
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK+ FLG PR+A++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFSNSGMTQFKDYFLGYKTPKAPRIADTQKCLRVSGKHNDLDDVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF +Y+K++A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGNYFKKEAIVFAWELLTE-VYKIPKENLYVT 127
>gi|221057404|ref|XP_002261210.1| alanine--tRNA ligase [Plasmodium knowlesi strain H]
gi|194247215|emb|CAQ40615.1| alanine--tRNA ligase, putative [Plasmodium knowlesi strain H]
Length = 1180
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 271/880 (30%), Positives = 423/880 (48%), Gaps = 147/880 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
L ++ +R F++YF + HT+++S+ ++PY D+++ F N+GM QFK +FLG
Sbjct: 191 LSAEEVRGRFINYF-KEKKHTVMESASVIPYNDNTLLFTNAGMNQFKKIFLGQVDKNSDL 249
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R ++QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K ++ A + LT
Sbjct: 250 GKLKRAVDTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKEESIDYAWDLLT 309
Query: 127 KPPVSLPLDRLYFTYFGGSDQY-GLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
P +RLY TYFGG ++ G P D E + IWL+ + I GMK NFWEM T
Sbjct: 310 NVYKIDP-NRLYVTYFGGDEKLPGCPEDFEAKRIWLKY-LDESRILPFGMKENFWEMAET 367
Query: 186 GPCGYSSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
GPCG SEIHYD + G +S+L VN D ++EIWNIVF+ + + + L ID
Sbjct: 368 GPCGPCSEIHYDRIGGRDASSL--VNMDDPSVLEIWNIVFMQYNKDEKKNMNKLPFPCID 425
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKP-YGRTFTTSNRTDLDTSYRML 303
TG+G ER+ +ILQN S YDTDLF+P+ + I+++ P YG + +D +YR++
Sbjct: 426 TGMGLERITSILQNVESNYDTDLFMPIFKQIKEIFNHLPEYGGKVNEEDVGRIDYAYRVV 485
Query: 304 SDYSRMITVALADNMFPDATAKLRNVVRDALL-----ISEDVFKVKQGKL-VKELSYNIA 357
SD+ R +T+A++D P RN V ++ + + +F+V+ L +L ++
Sbjct: 486 SDHIRCVTIAISDGCLPGNEG--RNYVIRRIIRRAIRVGKQIFQVESNVLWFYKLVDSVC 543
Query: 358 EILGDVYPEIQDS--INKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
+IL + ++QD +N I+ I+ +E +F+ + V ++ ++K I
Sbjct: 544 QILKKCFTDLQDENRVNYIKSIIKQEEMVFNKTLEKGVDQFNKIIKKSNNAGGDKIF--- 600
Query: 416 GLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQK 475
+G AF LY +YG ++IQ + K L FE
Sbjct: 601 ----------------------NGKDAFDLYTSYGFPIDLIQIMCEEKNFKL--NMFE-- 634
Query: 476 LNELKERSKAKAASNVPDID-LMDL----------KH-FPVTDDKYKYDYHYDTNSKRYT 523
NEL ++ + + +N I+ DL KH T+D +KY+++ D +R
Sbjct: 635 FNELFKKHQLVSDTNNFKINKFFDLPVEKAHELKEKHGVEATEDHHKYEWNND--DRRND 692
Query: 524 FPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHN-AWVGLIFDKTNLYATAG 582
+DTN+V I G+ IDSI+ ++ LI +TN Y G
Sbjct: 693 MKKVDTNIVVIYDGENF----------------IDSIKTPNDDKKYALILKETNFYYENG 736
Query: 583 GQIDDIGVAYLTNTTQENG--KVEIGELASLEGKIVHFGNVVSSFKVTPG--LTSRVEVD 638
GQI D GV ENG K ++ + + ++H G ++ K+ + + V D
Sbjct: 737 GQIYDTGVI-------ENGQMKFQVLNVQKMNDYVLHIG-ILKEGKIEKNDSVHTYVNFD 788
Query: 639 ARMRLGCMRAHTTSHLLNAALRRVLT--------------------------------CT 666
R + C HT +HLLN +++VLT C
Sbjct: 789 RRKLVAC--NHTATHLLNFVIKKVLTEYVVNGEGQMKNGDLVQKKNEKEETGMNSIFNCD 846
Query: 667 YQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTH 726
QK V ++ DFS + + +S D V+ +E +ND+I ++ V R M E +
Sbjct: 847 -QKGSLVDDEKLRFDFSFF-QNISDDLVSKIESQVNDLIKQELSVSVRTMDLKESKKIKG 904
Query: 727 LTVIPGEIYPD--DVILIDISDKENVI-----------SREPCCGTHVFNTGHIESCTVI 773
+ I E Y D +V+ ID +D + ++ S E C GTH+ NT I+ +
Sbjct: 905 IRAIFEEDYADVVNVVFID-NDVDKILNHLDVNYSYMCSIELCGGTHIANTKFIKKFIIT 963
Query: 774 GYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQIL 813
+S G+ I +T + KA K + A + I
Sbjct: 964 SEESIGKGIYRINAVT--NRKAEEVEAKFDNLYAKYKHIF 1001
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 68/107 (63%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D+++ F N+GM QFK +FLG R ++QKCIR GGKHNDL G+D
Sbjct: 218 IPYNDNTLLFTNAGMNQFKKIFLGQVDKNSDLGKLKRAVDTQKCIRAGGKHNDLDDVGKD 277
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K ++ A + LT P +RLY T+
Sbjct: 278 VYHHTFFEMLGNWSFGDYFKEESIDYAWDLLTNVYKIDP-NRLYVTY 323
>gi|52424403|ref|YP_087540.1| alanyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
gi|59798509|sp|Q65VQ5.1|SYA_MANSM RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|52306455|gb|AAU36955.1| AlaS protein [Mannheimia succiniciproducens MBEL55E]
Length = 875
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 257/805 (31%), Positives = 390/805 (48%), Gaps = 128/805 (15%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR S+LD+F +++GH +V+SS +VP+ D ++ F N+GM QFK+VFLG+ PY R
Sbjct: 3 TTAQIRQSYLDFF-HSKGHQVVESSSLVPHNDPTLLFTNAGMNQFKDVFLGMDKRPYTRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA EFLT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIAYGWEFLTSPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP ++LY T + D+E DIW E+GVP DHI + G NFW MG
Sbjct: 122 LPKEKLYVTVY--------ETDDEAYDIWNKEVGVPADHIIRIGDNKGAPYASDNFWAMG 173
Query: 184 STGPCGYSSEIHYDMKGEPSSALARV-NADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
TGPCG +EI YD L D + IEIWNIVF+ R + T+ L K
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGLPGTPEEDGDRYIEIWNIVFMQFNRHADGTMEKLPKPS 233
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-DTSYR 301
+DTG+G ER+ +LQ+ S YD D+F L++ + +++G K DL + S R
Sbjct: 234 VDTGMGLERIAAVLQHVNSNYDIDIFQTLIKKVAQLTGEK------------DLTNKSLR 281
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KELSYN 355
+++D+ R +AD + P + LR ++R A V+ G L+ + Y
Sbjct: 282 VIADHIRSCAYLIADGVMPSNEGRGYVLRRIIRRA---------VRHGHLLGAKETFFYK 332
Query: 356 IAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
+ L DV + +N+ ++A +++ + E EQF E
Sbjct: 333 LVPTLADVMEHAGEIVNQ---------------KRALIEK-----TLKAEEEQFARTLER 372
Query: 416 GLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQK 475
GL+L L++ +D +SGD+AF LYDTYG ++ ++ + +T+ + FE++
Sbjct: 373 GLLLLDDALSQ--VKD---NVLSGDVAFKLYDTYGFPLDLTADVCRERNITIDEKGFERE 427
Query: 476 LNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ +R++A+A+SN +D + D + ++ K Y L + V +
Sbjct: 428 MQ--AQRARAQASSNFG----VDYNNVIKVDGQTEF--------KGYETTSLSSAKVVAL 473
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG------ 589
D G S++ +Q NA V I D+T Y +GGQI D G
Sbjct: 474 FTD---------------GKSVERVQSGENAVV--ILDRTPFYGESGGQIGDTGYIATDL 516
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
A+ N TQ+ G+V G + LE + G+ VS+ +VD RL H
Sbjct: 517 AAFRINDTQKYGQV-TGHIGQLESGSLSVGDTVSA-----------QVDTERRLAVAANH 564
Query: 650 TTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
+ +HLL+AALR+VL QK V DF + E +S + + +E +N I
Sbjct: 565 SATHLLHAALRKVLGDHVAQKGSLVSESALRFDF-IQPEAISKEQIIEIEAIVNRQIREN 623
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIE 768
+ V M E + GE Y D V ++ ++ S E C GTHV TG I
Sbjct: 624 ISVTTEVMDI-EAAKQKGAMALFGEKYGDLVRVVGMTG----FSIELCGGTHVKRTGDIG 678
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSS 793
V+ + G+R I+ +T +++
Sbjct: 679 LFKVVSESAIAAGIRRIEAVTAENA 703
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLG+ PY R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPHNDPTLLFTNAGMNQFKDVFLGMDKRPYTRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA EFLT P + LP ++LY T
Sbjct: 89 FFEMLGNFSFGDYFKHDAIAYGWEFLTSPQWLGLPKEKLYVT 130
>gi|188995245|ref|YP_001929497.1| alanyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
gi|188594925|dbj|BAG33900.1| alanyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
Length = 876
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 250/798 (31%), Positives = 385/798 (48%), Gaps = 118/798 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L SK IR SF +F ++GH +V S+P+V GD ++ F N+GM QFK++ LG T A Y R
Sbjct: 2 LTSKEIRESFKTFFA-SKGHKIVPSAPMVIKGDPTLMFTNAGMNQFKDIILGNTEAKYTR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIEWAWEYLV-TVLG 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L RLY T F GS + GL D+E W + +P + I NFWEMG TGPCG
Sbjct: 120 LDPQRLYATVFEGSPEEGLDRDDEAASYWAQF-LPEERIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + A L +N +IEIWN+VF+ + R + ++ PL IDTG+
Sbjct: 179 SEIHIDLRSDEERAQINGLELINKSHPQVIEIWNLVFMQYNRKADSSLTPLPHKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F PL+ + ++G YG + D + R+++D+
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPLIHALATMTGI-GYGEDSAS------DIAMRVVADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I A+ D P A +R ++R A+ ++ + + L + + +GD Y
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLHCREAFMYRLLP-TLIDTMGDAY 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+Q I ++ EE F LR L G++ L
Sbjct: 351 PELQAQRELISRVIKEEEESF--LRT--------------------------LETGIRLL 382
Query: 425 TKQLARDPSI--TEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
K++A + + T + G AF LYDT+G ++ + + +T+ F+ ++ + KER
Sbjct: 383 EKKIADNKATGSTVLDGVAAFELYDTFGFPLDLTALILSENGMTVDESGFDTEMQKQKER 442
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
++ AA D ++ ++ Y F +T +
Sbjct: 443 ARNAAAVEAGDWVVL---------------REGESKFSGYDFTETETEI----------- 476
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQ-------IDDIGVAY-LT 594
+R+ + ++ ++ + ++ T YA GGQ ID+ GVAY +
Sbjct: 477 -----LRYRQ-------VKQKNKEYFQVVLLDTPFYAEMGGQVGDSGQLIDESGVAYDIF 524
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+T +EN VH + T +R+ D R + HT +HL
Sbjct: 525 DTKRENNLS------------VHLMKKLPE-STTDTFVARINQDKRRQ--AEANHTATHL 569
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
L+ ALR VL T QK V + DFS +G+ +S + + VE+ +++ I Q +
Sbjct: 570 LHEALREVLGTHVEQKGSFVSPEVLRFDFSHFGK-MSPEEIRKVEELVSERIRADFQREE 628
Query: 714 -RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
R + +E + + + GE Y ++V ++ S E C GTH+ +TG I + +
Sbjct: 629 FRDVPIAEAQAMGAMALF-GEKYGEEVRVLKYGS-----SVELCGGTHIPSTGMIGTFRI 682
Query: 773 IGYKSYNHGVRSIKCLTG 790
+ S GVR I+ +TG
Sbjct: 683 VTESSIASGVRRIEAVTG 700
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++ LG T A Y RVA+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 32 GDPTLMFTNAGMNQFKDIILGNTEAKYTRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 91
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K++A A E+L + L RLY T
Sbjct: 92 MLGNWSFGDYFKKEAIEWAWEYLV-TVLGLDPQRLYAT 128
>gi|148657329|ref|YP_001277534.1| alanyl-tRNA synthetase [Roseiflexus sp. RS-1]
gi|148569439|gb|ABQ91584.1| alanyl-tRNA synthetase [Roseiflexus sp. RS-1]
Length = 931
Score = 349 bits (896), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 263/820 (32%), Positives = 391/820 (47%), Gaps = 109/820 (13%)
Query: 6 ISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLT 65
I + +L S +IR FL +F +GH V SS ++P D ++ F NSGM QFK+ FLGL
Sbjct: 24 IIAMKKLSSAAIREQFLRFF-EERGHVRVPSSSLIPGNDPTLLFTNSGMVQFKDTFLGLE 82
Query: 66 PAPYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
PY R QKC+RV GKHNDL G HHTFFEMLGN+SF DY+K +A MA E L
Sbjct: 83 QRPYTRATTVQKCLRVSGKHNDLEEVGPSPRHHTFFEMLGNFSFGDYFKSEAIPMAWELL 142
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
TK LP++RL+FT F G D+ +P D+E +W+ G D + + G K NFW M T
Sbjct: 143 TKV-FELPVERLWFTVFEGDDE--VPPDDEAAQLWVAAGADPDRVLRFGRKDNFWVMADT 199
Query: 186 GPCGYSSEIHYDMKGEPSSALAR-VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
GPCG SEI + + + A+ VN+D + +EIWN VF+ +R T+ PL + +D
Sbjct: 200 GPCGPCSEITIYIGDDLRAMSAQGVNSDDPNYVEIWNNVFMQFER---STMQPLHRPSVD 256
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
TG+G ER+ ++Q STY+TDLF+PL+E + GA ++ R + YR ++
Sbjct: 257 TGMGLERMAMVMQGVHSTYETDLFIPLIERQLALLGAD------ESTYRARV-APYRAVA 309
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D+SR + +AD + P T + LR ++R A+ V K + E+ + E +G
Sbjct: 310 DHSRAVAFLIADGVLPGNTGRSYVLRRILRRAVYQGRTVGFEK--PFLAEIVAAVIEQMG 367
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
VYPE+++ + I + E R F LR L G+
Sbjct: 368 AVYPELRERADFILETVDLEERQF--LRT--------------------------LSGGM 399
Query: 422 KYLTK--QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
L + R T I GD AFTL DTYG ++ Q++AA LT+ +E+++ E
Sbjct: 400 SILNSVIERVRASGSTVIPGDDAFTLKDTYGFPLDLTQKIAAEHGLTVDEAGYERRMEEQ 459
Query: 480 KERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT-FPCLDTNLVGIVIGD 538
++R + A F + + D R+T + + + G+V
Sbjct: 460 RDRGRRAA-------------QFKRAAEAEVW-AGIDLPPTRFTGYAAVSGS--GVV--- 500
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
Q + + A +G + + D T YA +GGQ+ D GV
Sbjct: 501 QAIVVAGDQVAEASAGQQVQ-----------IALDSTPFYAESGGQVGDTGV-----LIG 544
Query: 599 ENGKVEIGELAS-LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
G+V + ++ + G IVH+G VV S V VD+ R MR HT +HLL+
Sbjct: 545 PRGRVRVEDVQRPVPGVIVHYG-VVESGSVMLHDPVDAHVDSGRRAAIMRNHTATHLLHR 603
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL Q V D DF+ + L+ + + +E+ +N I V + +
Sbjct: 604 ALRDVLGEHAAQAGSLVAPDRLRFDFT-HTRPLTPEQLHEIERRVNAWIRADTPVVWQEL 662
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDI--------------SDKE----NVISREPCCG 758
+ + + GE Y D V ++ I +++E + SRE C G
Sbjct: 663 -SYQAAIEAGAIALFGEKYGDVVRMVTIGCVNGHDAPSPAALAERELAGFPMCSRELCGG 721
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
THV +G I +I S GVR I+ LTG ++A V+
Sbjct: 722 THVGRSGEIGLFRIISESSVAAGVRRIEALTGPEAEAWVD 761
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F NSGM QFK+ FLGL PY R QKC+RV GKHNDL G HHT
Sbjct: 57 IPGNDPTLLFTNSGMVQFKDTFLGLEQRPYTRATTVQKCLRVSGKHNDLEEVGPSPRHHT 116
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K +A MA E LTK LP++RL+FT
Sbjct: 117 FFEMLGNFSFGDYFKSEAIPMAWELLTK-VFELPVERLWFT 156
>gi|257465412|ref|ZP_05629783.1| alanyl-tRNA synthetase [Actinobacillus minor 202]
gi|257451072|gb|EEV25115.1| alanyl-tRNA synthetase [Actinobacillus minor 202]
Length = 874
Score = 349 bits (896), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 259/813 (31%), Positives = 390/813 (47%), Gaps = 123/813 (15%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR SFLD+F ++GHT+V+SS +VP D ++ F N+GM QFK+VFLGL PY R
Sbjct: 3 TTSEIRQSFLDFF-QSKGHTVVESSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEM+GN+SF DY+K+DA + E+LT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKQDAIQFGWEYLTSPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEG-------MKCNFWEMG 183
LP ++LY T + D+E DIW ++ GVP DHI + G NFW MG
Sbjct: 122 LPKEKLYVTVY--------ETDDEAYDIWHKIVGVPADHIIRIGDNKGAPYASDNFWAMG 173
Query: 184 STGPCGYSSEIHYDMKGEPSSALARV-NADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
TGPCG +EI YD + L D + IE+WNIVF+ R + T+ L K
Sbjct: 174 DTGPCGPCTEIFYDHGDKYWGGLPGTPEEDGDRFIEVWNIVFMQFNRQADGTMEKLPKPS 233
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT-SYR 301
+DTG+G ER+ ++Q+ S Y+ D+F L++TI ++ K DLD S R
Sbjct: 234 VDTGMGLERMTAVMQHVNSNYEIDIFQTLIKTIAELLNVK------------DLDNKSLR 281
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAE 358
+++D+ R + +AD + P + LR ++R A+ ++ K+ K L +A+
Sbjct: 282 VIADHIRSCSYLIADGVAPSNEGRGYVLRRIIRRAVRHG-NILGAKEAFFYK-LVPTLAQ 339
Query: 359 ILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
++G + IQ L + E EQF E GL
Sbjct: 340 VMGHAGEIVAQKQAHIQKTL------------------------KAEEEQFARTLERGLA 375
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
L LTK +SGD+AF LYDTYG ++ ++ + + + FE ++
Sbjct: 376 LLEDALTK-----VENNTLSGDVAFKLYDTYGFPLDLTADVCRERNIVIDEAGFEAEMQA 430
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
+ER AKA+SN +D + D K + YD + T L +N
Sbjct: 431 QRER--AKASSNFG----VDYNNVIKVDGKTDF-IGYDNLTAEATVVGLFSN-------- 475
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG------VAY 592
G ++D ++ NA + I DKT YA GGQ+ D G +
Sbjct: 476 ---------------GNAVDVVKSGENAII--ILDKTPFYAEMGGQVGDSGRISTEFCQF 518
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
TQ+ G+V G + +E + G+ V++ EV A R H+ +
Sbjct: 519 HVVDTQKYGQV-FGHIGQIEAGELKVGDKVTA-----------EVAAERRHSIQLNHSAT 566
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL++ALR VL T QK V + DFS E ++ + + A+E+ +N I ++V
Sbjct: 567 HLLHSALREVLGTHVMQKGSLVNENGLRFDFS-QPEAITKEQLEAIERIVNAKIRENIEV 625
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
M E + + GE Y D V ++D+S V S E C GTHV TG I
Sbjct: 626 VIEEMGIEEAKAKGAMALF-GEKYGDVVRVVDMS----VFSIELCGGTHVKRTGDIGLFK 680
Query: 772 VIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
+ + GVR ++ +TG+++ A + N + ++
Sbjct: 681 ITSEGAVAAGVRRVEAITGEAALAWLHNLQQMT 713
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL PY R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+K+DA + E+LT P + LP ++LY T
Sbjct: 89 FFEMMGNFSFGDYFKQDAIQFGWEYLTSPQWLGLPKEKLYVT 130
>gi|334147010|ref|YP_004509939.1| alanyl-tRNA synthetase [Porphyromonas gingivalis TDC60]
gi|333804166|dbj|BAK25373.1| alanyl-tRNA synthetase [Porphyromonas gingivalis TDC60]
Length = 876
Score = 349 bits (896), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 248/798 (31%), Positives = 386/798 (48%), Gaps = 118/798 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L SK IR SF +F ++GH +V S+P+V GD ++ F N+GM QFK++ LG T A Y R
Sbjct: 2 LTSKEIRESFKTFFA-SKGHKIVPSAPMVIKGDPTLMFTNAGMNQFKDIILGNTEAKYTR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIEWAWEYLVS-VLG 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L RLY T F G+ + GL D+E W + +P + I NFWEMG TGPCG
Sbjct: 120 LDPQRLYATVFEGNPEEGLDRDDEAASYWAQF-LPEERIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + A L +N +IEIWN+VF+ + R + ++ PL IDTG+
Sbjct: 179 SEIHIDLRSDEERAQINGLELINKSHPQVIEIWNLVFMQYNRKADSSLTPLPHKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F PL+ T+ ++G YG + D + R+++D+
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPLIRTLATMTGIG-YGEDSAS------DIAMRVVADHI 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I A+ D P A +R ++R A+ ++ + + L + + +GD Y
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLHCREAFMYRLLP-TLIDTMGDAY 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+Q I ++ EE F LR L G++ L
Sbjct: 351 PELQAQRELISRVIKEEEESF--LRT--------------------------LETGIRLL 382
Query: 425 TKQLARDPSI--TEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
K++A + + T + G AF LYDT+G ++ + + +T+ F+ ++ + KER
Sbjct: 383 EKKIADNKAAGSTVLDGAAAFELYDTFGFPLDLTALILSENGMTVDESGFDTEMQKQKER 442
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
++ AA D ++ ++ Y F +T +
Sbjct: 443 ARNAAAVEAGDWVVL---------------REGESKFSGYDFTETETEI----------- 476
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQ-------IDDIGVAY-LT 594
+R+ + ++ ++ + ++ T YA GGQ ID+ G+AY +
Sbjct: 477 -----LRYRQ-------VKQKNKEYFQVVLSDTPFYAEMGGQVGDSGQLIDESGIAYDVF 524
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+T +EN VH + T +R+ + R + HT +HL
Sbjct: 525 DTKRENNLS------------VHLMKKLPE-STTDTFVARINQNKRRQ--AEANHTATHL 569
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
L+ ALR VL T QK V + DFS +G+ +S + + VE+ +++ I Q +
Sbjct: 570 LHEALREVLGTHVGQKGSFVSPEVLRFDFSHFGK-MSPEEIRKVEELVSERIRADFQREE 628
Query: 714 -RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
R + +E + + + GE Y ++V ++ S E C GTH+ +TG I + +
Sbjct: 629 FRDVPIAEAQAMGAMALF-GEKYGEEVRVLKYGS-----SVELCGGTHIPSTGMIGTFRI 682
Query: 773 IGYKSYNHGVRSIKCLTG 790
+ S GVR I+ +TG
Sbjct: 683 VTESSIASGVRRIEAVTG 700
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++ LG T A Y RVA+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 32 GDPTLMFTNAGMNQFKDIILGNTEAKYTRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 91
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K++A A E+L + L RLY T
Sbjct: 92 MLGNWSFGDYFKKEAIEWAWEYLVS-VLGLDPQRLYAT 128
>gi|156089757|ref|XP_001612285.1| alanyl-tRNA synthetase family protein [Babesia bovis]
gi|154799539|gb|EDO08717.1| alanyl-tRNA synthetase family protein [Babesia bovis]
Length = 978
Score = 349 bits (896), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 264/839 (31%), Positives = 407/839 (48%), Gaps = 125/839 (14%)
Query: 3 NPNISSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFL 62
NP S ++ S +RS F+ +F GH KSSP++P+ D ++ F N+GM QFK++
Sbjct: 11 NPGSSEFIVNSSGWVRSEFIRHF-EKHGHVFWKSSPVLPHNDPTLLFANAGMNQFKDIIT 69
Query: 63 GLTPAPYP-----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDA 117
G RV NSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A
Sbjct: 70 GKADQSTEYGRLRRVCNSQKCIRAGGKHNDLDDVGRDSYHHTFFEMLGNWSFGDYFKKEA 129
Query: 118 CRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLP-C--DEETRDIWLELGVPRDHIKKEG 174
MA E +T+ L RLY TYFGG + LP C DEE RD+WL +P I G
Sbjct: 130 IDMAWELMTE-VYKLDKSRLYVTYFGGDPK--LPNCGPDEEARDLWLR-HLPASRILPFG 185
Query: 175 MKCNFWEMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADT 234
MK NFWEM TGPCG SEIHYD G +A + VNAD ++E+WN+VF+ + R S +
Sbjct: 186 MKDNFWEMADTGPCGPCSEIHYDHIGGRDAA-SLVNADDPMVVELWNLVFMQYNRKSDGS 244
Query: 235 IVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKV-SGAKPYGRTFTTSNR 293
+ L + +DTG+G ER+ +L++ S YD DLF + + K+ PYG + +
Sbjct: 245 VELLPRPCVDTGMGLERVCAVLKSSNSNYDGDLFTDIFAYVNKLMPHLPPYGGSDSM--- 301
Query: 294 TDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVK 350
+D +YR+++D++R +TVA+AD + P + LR ++R A+ ++ G +
Sbjct: 302 --IDVAYRVVADHARCLTVAIADGVEPSNDGRGYVLRRILRRAVRYGKEHLG-SSGPFMS 358
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIF-DNLRKAAVKEWKPLVKTQPELEQF 409
+L + LG +PEIQ++ +KI + E +F + L K + K + K Q E
Sbjct: 359 KLVDCVVASLGVAFPEIQNNNDKIAATIHNEEVLFLETLDKGCDRFRKMVAKLQAGTEN- 417
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
+K L +SG AF LY ++G ++ Q +A L +
Sbjct: 418 ---------------SKDLV-------VSGADAFLLYSSFGFPPDLTQLMAREMGLDVDI 455
Query: 470 EAF------EQKLNELK--------ERSKAKAASNVPDIDLMDLKHF---PVTDDKYKY- 511
+ F Q+L+E K E+ A S + L + + VTDD KY
Sbjct: 456 DGFNEHFKRHQQLSEKKLCKSDDPVEQGMADLLSTLSADVLATISNSIGGRVTDDSLKYH 515
Query: 512 --------DYHYDTNS-KRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQL 562
D YD +++ L+ L
Sbjct: 516 GFAEAYDVDLEYDVEVLAQWSLSGLNKPLT------------------------------ 545
Query: 563 EHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVV 622
E + +V L+ D+T YA +GGQI D+G G + ++ + G + HF V
Sbjct: 546 EGDVFV-LVLDRTPFYAESGGQIWDVGTL---------GPFNVMKVLKMAGMVFHF-CVY 594
Query: 623 SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALD 681
PG + +VD + R+ HT +HLLN LR V +YQK ++ DE L
Sbjct: 595 HEGNAMPGARVKAKVDYKRRVKVACNHTGTHLLNFVLREVYDEQSYQKGSQL--DEEKLK 652
Query: 682 FSVYG-ETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVI 740
F + + + +++ +E + ++I +++ R + + + + ++YP+ V
Sbjct: 653 FDIAANKQMPDETLQRIEDRMQEIIDANWKIEVREIDFKDAVEIPGIRANFTDVYPEVVR 712
Query: 741 LIDISDKENVI-----SREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSK 794
++ ++ I S E C GTHV TG ++S ++G +S + GVR + T + S+
Sbjct: 713 VVAMTKDGQPIDGKAYSVEICGGTHVPFTGVLKSAIIVGEESVSKGVRRLTLATNEKSE 771
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK++ G RV NSQKCIR GGKHNDL GRD
Sbjct: 47 LPHNDPTLLFANAGMNQFKDIITGKADQSTEYGRLRRVCNSQKCIRAGGKHNDLDDVGRD 106
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A MA E +T+ L RLY T+
Sbjct: 107 SYHHTFFEMLGNWSFGDYFKKEAIDMAWELMTE-VYKLDKSRLYVTY 152
>gi|350560893|ref|ZP_08929732.1| alanyl-tRNA synthetase [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349781000|gb|EGZ35308.1| alanyl-tRNA synthetase [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 871
Score = 349 bits (895), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 254/810 (31%), Positives = 377/810 (46%), Gaps = 130/810 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR SFLD+F GH V SSP+VP D ++ F NSGM QFK VFLG PY R
Sbjct: 1 MKSADIRRSFLDFFIR-HGHVEVPSSPLVPGNDPTLLFTNSGMVQFKEVFLGREKRPYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+KR+A A EFLT+ +
Sbjct: 60 AVSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIAYAWEFLTET-IE 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHI-----KKEGMKCNFWEMGST 185
+P+DRL+ T + D++ IW+ E+GV + + K G NFW+MG T
Sbjct: 119 IPVDRLWVTVY--------ETDDDAYAIWVNEIGVAPERVLRIGDKPGGSSDNFWQMGDT 170
Query: 186 GPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
GPCG +EI YD G P S + D + IEIWN+VF+ + R S+ + PL
Sbjct: 171 GPCGPCTEIFYDHGPEVAGGPPGSP----DEDGDRYIEIWNLVFMQYDRDSSGNLTPLPH 226
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT-S 299
+DTG+G ERL +LQ S Y+ DLF L+ ++ G K DLD+ S
Sbjct: 227 PSVDTGMGLERLAAVLQGVHSNYEIDLFRDLIHAAAEIVGTK------------DLDSAS 274
Query: 300 YRMLSDYSRMITVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLVKE 351
++++D+ R I + D + P + LR V+R A L ++ F +
Sbjct: 275 LKVIADHIRSIAFLITDGVMPGNEGRGYVLRRVIRRAARHGHKLGCDEAFLYR------- 327
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLIL-GEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + +G+ YPE+ + ++ +L EE + + L K
Sbjct: 328 LIPALVSAMGEAYPELAEGQENLERVLRKEEMKFLETLEK-------------------- 367
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
GV+ L + L R T I G+ F LYDTYG ++ ++A + L L E
Sbjct: 368 ---------GVRILEEDLGRLQGST-IPGETIFLLYDTYGFPVDLTGDIARERGLELDLE 417
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
FE+ + E +R +A+AAS+ MD P D ++
Sbjct: 418 GFERAMQE--QRDRARAASHF----TMDTAQAPGMDVATEF------------------- 452
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
G + + + R +D+++L V + D+T YA +GGQ+ DIG
Sbjct: 453 -----TGYERLEDEGRVVALFRDHEPVDALELGEGGIV--VLDRTPFYAESGGQVGDIGT 505
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ + E+G+ + +H G V + ++ G+T R V R R H+
Sbjct: 506 LSASGV-----RFEVGDTRKQDSAHLHVGQVRAG-RIERGMTLRCSVAGPRRDAIRRHHS 559
Query: 651 TSHLLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+HLL+ ALR L QK V ++ DF+ + E +S + + +E +N I V
Sbjct: 560 ATHLLHKALRDQLGGHIQQKGSLVDAERLRFDFAHF-EPVSAEQLRQIEAQVNAEILANV 618
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIES 769
D R M E + + GE Y + V ++ I S E C GTHV TG I
Sbjct: 619 PTDTRLMDI-ESALASGAVALFGEKYGERVRVLTIGS-----STELCGGTHVARTGDIGP 672
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSSKAAVEN 799
++ GVR I+ + G ++A V+
Sbjct: 673 FRIVSEGGVAAGVRRIEAVAGSVAQAWVDQ 702
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK VFLG PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLLFTNSGMVQFKEVFLGREKRPYTRAVSSQRCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KR+A A EFLT+ + +P+DRL+ T
Sbjct: 88 FFEMLGNFSFGDYFKREAIAYAWEFLTE-TIEIPVDRLWVT 127
>gi|414072850|ref|ZP_11408766.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. Bsw20308]
gi|410804722|gb|EKS10771.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. Bsw20308]
Length = 866
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 260/812 (32%), Positives = 383/812 (47%), Gaps = 118/812 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FLD+F + Q H +V SS ++P D ++ F N+GM QFK+VFLG PY R
Sbjct: 4 MTTAQIRQQFLDFFASKQ-HQIVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA + A EFLT+ VS
Sbjct: 63 ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVS 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L T + DEE W E+G+P D I + NFW MG TGPCG
Sbjct: 122 LPKEKLLVTIY--------HDDEEAFGYWANEIGLPEDRIIRIATSDNFWSMGDTGPCGP 173
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI YD G P + D + IEIWN+VF+ + R S T++PL K +DT
Sbjct: 174 CSEIFYDHGEHIWGGPPGTP----EEDGDRFIEIWNLVFMQYNRQSDGTMLPLPKQSVDT 229
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ILQ S Y+ DLF L+ V+ A+ D S R+++D
Sbjct: 230 GMGLERISAILQGVHSNYEIDLFQGLIAAAASVTNAQDMD-----------DKSLRVVAD 278
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R ++D + P + LR ++R A+ + QG +L + E +G
Sbjct: 279 HIRSCAFLISDGVMPSNEGRGYVLRRIIRRAVRHGNKLG--AQGSFFYKLVAALIEQMGQ 336
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ +L RI E EQF E GL + +
Sbjct: 337 AYPELAKQQEIIEKVL----RI--------------------EEEQFGKTLERGLAILEE 372
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L+ D I GD+ F LYDTYG ++ ++A +++T+ H+ FE+ + +R
Sbjct: 373 SLS-----DLKGDIIPGDLVFKLYDTYGFPADLTADVARERQMTIDHQGFEECM--AVQR 425
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT-FPCLD-TNLVGIVIGDQV 540
A+ A K+ DY+ S ++T F D T+ VI ++
Sbjct: 426 KTAQQAG------------------KFGADYNDQLKSDKHTDFKGYDSTHYSATVI--EI 465
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGL-IFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
F A +++QL + G+ + D+T YA +GGQ D G T
Sbjct: 466 F-------------AGGEAVQLLEDGQQGIVVLDRTPFYAESGGQTGDTGT-----ITVA 507
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
G+ + L H G V V + + ++ DAR R + HT +H+L+ AL
Sbjct: 508 GGEFNVTNTTKLGNAFAHHGTVQGRIGVNDKVDATID-DAR-RDSIKKNHTATHILHEAL 565
Query: 660 RRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R++L QK V D DFS + E ++ D + +E+ +ND I ++ M
Sbjct: 566 RQLLGDHVGQKGSLVQPDRLRFDFSHF-EAVTKDELREIERVVNDEIRRNFALNTELMAI 624
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ + + GE Y D+V ++ I D S E C GTHV G I ++
Sbjct: 625 DDAKAKGAMALF-GEKYDDEVRVVTIGD----YSIELCGGTHVERAGDIGLFKIVSESGI 679
Query: 779 NHGVRSIKCLTGDSSKAAV-ENGKHLSTAASF 809
GVR I+ +TG + A V E + LS A+
Sbjct: 680 AAGVRRIEAVTGADAVAYVSEQEQQLSDVAAL 711
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 31 IPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQRCVRAGGKHNDLENVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K+DA + A EFLT+ VSLP ++L T
Sbjct: 91 FFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVSLPKEKLLVTI 131
>gi|386826904|ref|ZP_10114011.1| alanine--tRNA ligase [Beggiatoa alba B18LD]
gi|386427788|gb|EIJ41616.1| alanine--tRNA ligase [Beggiatoa alba B18LD]
Length = 868
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 252/806 (31%), Positives = 384/806 (47%), Gaps = 122/806 (15%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
+R FL+YF ++GHT+V SSP+VP D ++ F N+GM QFK+ FLGL Y R Q
Sbjct: 7 LRQKFLNYFA-SKGHTIVSSSPLVPGNDPTLLFTNAGMVQFKDTFLGLEKRDYKRAVTCQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
+CVR GGKHNDL G + HHTFFEMLGN+SF DY+KR+A + A EFLTK + LP ++
Sbjct: 66 RCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQFAWEFLTK-ELGLPPEK 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
L+ T + D E DIWL E+ + + G NFW MG TGPCG SEI
Sbjct: 125 LWVTVY--------EEDREAEDIWLKEMKIDPTRFSRCGKHSNFWMMGDTGPCGPCSEIF 176
Query: 196 YD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
YD G P S + D + IEIWN+VF+ R + T+ PL +DTG+G E
Sbjct: 177 YDHGEGIFGGPPGSP----DEDGDRYIEIWNLVFMQFNRDTNGTLTPLPHPSVDTGMGLE 232
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-DTSYRMLSDYSRM 309
RL +LQ+ S Y+ DLF LL+ + ++ +NR+D ++S R+++D+ R
Sbjct: 233 RLAAVLQHVHSNYEIDLFQALLKAVGEI------------TNRSDYSNSSLRVIADHIRA 280
Query: 310 ITVALADNMFPDATAK---LRNVVRDA------LLISEDVFKVKQGKLVKELSYNIAEIL 360
+ D + P + LR ++R A L + E F L KE +
Sbjct: 281 CAFLIVDGVIPSNEGRGYVLRRIIRRAVRHGYKLGLHEPFFYRLVAALDKE--------M 332
Query: 361 GDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
G YPE++ + + + +L +E E+F G+VL
Sbjct: 333 GAAYPELRQATDLVSRLLKQEE------------------------ERFAETLSHGMVL- 367
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L + + T I+G++ F LYDTYG ++ ++A +L++ E FE+ +NE
Sbjct: 368 ---LNEAMQHLKGSTVIAGEVVFKLYDTYGFPTDLTADIAREHQLSIDAEGFERCMNE-- 422
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
+R++A+ A + +DL + +T D Y+ + T L
Sbjct: 423 QRTRAREAGHFK----VDLSNVALTADCQSTFTGYEAVAGEGTITAL------------- 465
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
+D H + +G + +I D+T YA +GGQ D G L+N N
Sbjct: 466 -FLDGHEVEQLNAGQTGQ-----------IILDQTPFYAESGGQAGDKG--QLSNV---N 508
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
+ + + H G + + G + ++D R R H+ +HLL+AALR
Sbjct: 509 ALFTVSDTQKIGHANAHIGKLTQG-TLRKGDKLQAQIDVVARQATARHHSATHLLHAALR 567
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
+VL QK V ++ DFS Y E ++ + +A +E+ +N+ I N V + M
Sbjct: 568 QVLGEHVKQKGSSVDAERLRFDFSHY-EAITPEQLAQIERIVNEKILNNSVVQTKVMNLD 626
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
+ + + GE Y DDV ++ ++D S E C GTHV G I ++
Sbjct: 627 D-AVKSGAMALFGEKYEDDVRVLSMADN---FSVELCGGTHVQRVGDIGLFKILSESGVA 682
Query: 780 HGVRSIKCLTGDSSKAAV-ENGKHLS 804
GVR I+ + G + A V E +HL+
Sbjct: 683 AGVRRIEAIAGTQTLAWVSETEQHLN 708
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+ FLGL Y R Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPGNDPTLLFTNAGMVQFKDTFLGLEKRDYKRAVTCQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KR+A + A EFLTK + LP ++L+ T
Sbjct: 89 FFEMLGNFSFGDYFKREAIQFAWEFLTK-ELGLPPEKLWVT 128
>gi|325298627|ref|YP_004258544.1| alanyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
gi|324318180|gb|ADY36071.1| alanyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
Length = 872
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 254/795 (31%), Positives = 377/795 (47%), Gaps = 113/795 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR SF+ +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTANEIRDSFVKFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V +SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++ A E+L
Sbjct: 61 VTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEVIGWAWEYLVD---V 117
Query: 132 LPLDR--LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
L +D LY T F GS + GL D E W E +P+DHI NFWEMG TGPCG
Sbjct: 118 LKIDPSILYATVFEGSPEEGLERDNEAAGYW-EQYLPKDHIINGNKHDNFWEMGDTGPCG 176
Query: 190 YSSEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ E A VN D +IEIWN+VF+ + R + ++ PL IDT
Sbjct: 177 PCSEIHIDLRSEEEKAKVPGRELVNKDNPLVIEIWNLVFMQYNRKADGSLEPLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ K S YDTD+F P+++ I ++G T +D + R+++D
Sbjct: 237 GMGFERLCMALQGKKSNYDTDVFQPIIKVIGDLTG-------LTYGKDPKVDVAMRVVAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ + KQ + K L + E +G
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYAYTFLGQKQAFMFK-LVPVLIENMGQ 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ K +PL++ + E+ + L G++
Sbjct: 349 AYPEL--------------------------KAQQPLIEKVIKEEEEAFLRT--LETGIR 380
Query: 423 YLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K + A+ TEISG AFTLYDT+G ++ + + +T+ E F ++ + K
Sbjct: 381 LLDKVMNDAKAAQKTEISGVDAFTLYDTFGFPLDLTELILRENGMTVNEEEFNIEMQKQK 440
Query: 481 ERSKAKAASNVPDIDLMD--LKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIG 537
+R++ AA D +++ HF YDY Y+T RY
Sbjct: 441 QRARNAAAIETGDWVILEEGETHF------VGYDYTEYETRILRYR-------------- 480
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
I+ ++ ++ +T YA +GGQ+ D GV
Sbjct: 481 ---------------------QIKQKNQTLYQIVLSETPFYAESGGQVGDTGV-----LV 514
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
E +EI + +H + P + VD R C H+ +HLL+
Sbjct: 515 SEFETIEIIDTKKENNLPIHIAKQLPEHLDAPMMAC---VDTDKRAACAANHSCTHLLDE 571
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRH 715
ALR+VL T QK V + DFS + + ++ + + VE +N I V + + R+
Sbjct: 572 ALRQVLGTHVEQKGSLVTPESLRFDFSHF-QKVTPEQLREVEHLVNAKIRENVPLTEYRN 630
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ + L + + GE Y D+V ++ S E C GTHV TG I ++
Sbjct: 631 LPIEKAKELGAIALF-GEKYGDEVRVVQFGS-----SIEFCGGTHVSATGKIGMVKILSE 684
Query: 776 KSYNHGVRSIKCLTG 790
S GVR I+ +TG
Sbjct: 685 SSVAAGVRRIEAITG 699
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 60/83 (72%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RV +SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYKRVTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLT 904
LGNWSF DY+K++ A E+L
Sbjct: 93 LGNWSFGDYFKKEVIGWAWEYLV 115
>gi|338210641|ref|YP_004654690.1| alanyl-tRNA synthetase [Runella slithyformis DSM 19594]
gi|336304456|gb|AEI47558.1| alanyl-tRNA synthetase [Runella slithyformis DSM 19594]
Length = 884
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 256/793 (32%), Positives = 382/793 (48%), Gaps = 88/793 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR +FLD+F ++GH +V S+P+V D ++ F NSGM QFK+ FLG P R
Sbjct: 1 MTSHEIRQAFLDFF-KSKGHLIVPSAPLVAKNDPTLMFNNSGMAQFKDFFLGNGTPPSKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A + E LT+
Sbjct: 60 IADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEALAWSWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DR+Y + F G ++ G+P D+E DIW E+ V D I K NFWEMG TGPCG
Sbjct: 119 LPKDRIYVSVFKGDEKDGVPFDQEAWDIWKEM-VGEDRIILGNKKDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + S VNAD ++EIWN VF+ +R + +++ L ++DTG+
Sbjct: 178 SEIHIDLRDQAEVDAKSGKELVNADHPQVVEIWNNVFMQFERKADGSLITLPAKHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +Q K S YDTD+F ++ IEK+ G K YG T + D + R+++D+
Sbjct: 238 GFERLCMAIQGKKSNYDTDIFQNTIQVIEKMCG-KQYGLNGTLNTTDYTDIAMRVIADHL 296
Query: 308 RMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQG---KLVKELSYNIAEILGDVY 364
R ++ A+AD P + AK V+R L + G + L +AE DV+
Sbjct: 297 RAVSFAIADGQLP-SNAKAGYVIRRILRRAIRYGYSYLGFTEPFMCRLVPVLAEQFKDVF 355
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ + + ++ EE + F +A +K ++ +
Sbjct: 356 PELKAQEDFVTRVVHEEEKSFLRTLEAGIKRFELIS------------------------ 391
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
A+ P+ I G++ F L DT+G ++ LA K + +E+ L E K RS+
Sbjct: 392 ----AQTPAGEIIDGEVVFELSDTFGFPVDLTALLAKEKGYKIDEAGYEKALAEQKNRSR 447
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
AA K D+ + + F DT + I
Sbjct: 448 QDAA-------------------KEATDWVEVSEGGDFEFLGYDTL-------EATAQIV 481
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
K+ ++G ++ D+T YA GGQ+ D G +TN E +
Sbjct: 482 KYRKVKTKAGEEYH-----------IVLDRTPFYAEMGGQVGDSGELRVTN--DEVRSIN 528
Query: 605 IGELASLEGKIVHFGNVVSSFKV--TPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
I + VH + ++ TP L+ VDA R MR HT +HL+ A LR+V
Sbjct: 529 IVDTKKENDLFVHISRDKNLEEILNTPHLSLIARVDAHRRQNIMRNHTATHLMLAGLRKV 588
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMRASE 720
L T QK + DFS + + ++ + + VE +N I AN Q ++ E
Sbjct: 589 LGTHIVQKGSYQNDEVTRFDFSHFAK-VTDEELKQVEDIVNAKIRANIAQKTYVNVPIDE 647
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
T GE Y D V +++ + S E C GTHV TG I S +
Sbjct: 648 -AIKKGATATFGEKYGDFVRVVEFDPQ---FSVELCGGTHVPFTGEIALFKFTSEGSVSA 703
Query: 781 GVRSIKCLTGDSS 793
GVR ++ +TG+ +
Sbjct: 704 GVRRVEAVTGEKA 716
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+ D ++ F NSGM QFK+ FLG P R+A++QKC+RV GKHNDL G D+YHHT
Sbjct: 28 VAKNDPTLMFNNSGMAQFKDFFLGNGTPPSKRIADTQKCLRVSGKHNDLEDVGFDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FEMLGNWSF DY+K++A + E LT+ LP DR+Y +
Sbjct: 88 MFEMLGNWSFGDYFKKEALAWSWELLTE-VYKLPKDRIYVS 127
>gi|219870706|ref|YP_002475081.1| alanyl-tRNA synthetase [Haemophilus parasuis SH0165]
gi|219690910|gb|ACL32133.1| alanyl-tRNA synthetase [Haemophilus parasuis SH0165]
Length = 875
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 261/808 (32%), Positives = 390/808 (48%), Gaps = 134/808 (16%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FL++F ++GHT+V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 3 TTSEIRQAFLEFF-QSKGHTIVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLDKRSYNRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA A EFLT P ++
Sbjct: 62 TSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKPDAIAFAWEFLTSPQWLA 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP ++L+ T + D+E DIW E+GVP +HI + G NFW+MG
Sbjct: 122 LPKEKLWVTVY--------ETDDEAYDIWNREIGVPAEHIVRIGDNKGAPYASDNFWQMG 173
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P SA D + IE+WN+VF+ R + T+ L
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSA----EEDGDRFIEVWNVVFMQFNRQADGTLKKL 229
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S Y+ D+F L++ I + N TDLD
Sbjct: 230 PKPSVDTGMGLERISAVLQHVNSNYEIDIFQALIKEIASL------------LNVTDLDN 277
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSY 354
S R+++D+ R +AD + P + LR ++R A V+ G ++ S
Sbjct: 278 KSLRVIADHIRSCAYLIADGVMPSNEGRGYVLRRIIRRA---------VRHGNILGAKSA 328
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
+++ P + ++ + IL ++ KA E +QF E
Sbjct: 329 FFYQLV----PTLAKAMGQAGEILTQKQAHIQKALKA-------------EEDQFARTLE 371
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
GL L LTK + +SG++AF LYDTYG ++ ++ + +T+ FE+
Sbjct: 372 RGLALLEDALTKVENK-----VLSGEVAFKLYDTYGFPLDLTADVCRERSITIDEAGFER 426
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
++ +R++A+A+SN TD Y T K Y + +V +
Sbjct: 427 EMQ--AQRARAQASSNFG------------TDYNYVIKVDGSTEFKGYEVTECEATVVAL 472
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA--- 591
+G ++++IQ NA V + D+T Y +GGQ+ D GV
Sbjct: 473 F----------------SNGKAVEAIQSGENAVV--VLDRTAFYGESGGQVGDSGVIASE 514
Query: 592 ---YLTNTTQENGKV--EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCM 646
+ N TQ+ G+V IG+LAS G + KV + EV+A R
Sbjct: 515 ICNFEVNDTQKYGQVFGHIGQLAS--------GTLSVGDKV------KAEVNATRRHAIT 560
Query: 647 RAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI 705
H+ +HLL++ALR+VL QK V + DFS GE +S + +E+ IN I
Sbjct: 561 LNHSATHLLHSALRQVLGDHVAQKGSLVSENSLRFDFS-QGEAISKADLEEIERIINTKI 619
Query: 706 ANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTG 765
+ V M + + GE Y D V ++D++ S E C GTHV TG
Sbjct: 620 RENIVVTTEVMDLESAKQKGAMALF-GEKYGDRVRVVDMT---AAFSVELCGGTHVKQTG 675
Query: 766 HIESCTVIGYKSYNHGVRSIKCLTGDSS 793
I V+ + GVR I+ +TG+++
Sbjct: 676 EIGLFKVVSEGAVAAGVRRIEAVTGENA 703
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R +SQ+C+R GGKHNDL G + HHT
Sbjct: 29 VPENDPTLLFTNAGMNQFKDVFLGLDKRSYNRATSSQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA A EFLT P ++LP ++L+ T
Sbjct: 89 FFEMLGNFSFGDYFKPDAIAFAWEFLTSPQWLALPKEKLWVT 130
>gi|212550874|ref|YP_002309191.1| alanyl-tRNA synthetase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549112|dbj|BAG83780.1| alanyl-tRNA synthetase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 872
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 247/792 (31%), Positives = 387/792 (48%), Gaps = 104/792 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +K IR SF DYF N + H +V SSP++ D ++ F N+GM QFK+V LG Y R
Sbjct: 1 MTAKKIRQSFKDYFEN-KNHKIVSSSPMIIKNDPTLMFTNAGMNQFKDVILGNALVKYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+AN QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+LT+ +
Sbjct: 60 IANVQKCLRVNGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIEYAWEYLTEI-LK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY T F G+ L D E + W + +P+ HI K NFWEMG+ GPCG
Sbjct: 119 LDKDRLYVTIFEGNSSEKLERDNEAANYWGKY-LPKSHIIDGNKKDNFWEMGNMGPCGPC 177
Query: 192 SEIHYDMKG----EPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E +L +N + +IEIWN+VF+ R ++ L + IDTG+
Sbjct: 178 SEIHIDIRSDEEREKVDSLTLINKNHPQVIEIWNLVFMQFNRKIDGSLENLPQKVIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL ++Q K S YDTD+F +++ I ++ F+ + D + R+++D+
Sbjct: 238 GFERLCMVVQGKASNYDTDVFQTIIQAISTIT-------KFSYGQNSQRDIAIRVVADHI 290
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++AD P T +R ++R A+ S + K+ + L ++ + +G+VY
Sbjct: 291 RTIAFSIADGQLPSNTKAGYVIRRILRRAVRYSYTFLEQKRA-FIYRLIPSLVDSMGEVY 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ +Q ++ EE F ++T L +G K L
Sbjct: 350 PELIAQKKMMQKVIKEEENSF--------------LQT--------------LEIGTKLL 381
Query: 425 TKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
K++ A+ + T I+G F LYDTYG ++I+ + + + + +F+ ++++ KER
Sbjct: 382 NKKIQEAKTKNKTTINGVDVFILYDTYGFPLDLIKLILHEQNMKMDKASFDAEMSKQKER 441
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI-VIGDQVF 541
A+ A+ + D + L+ DT VG I Q
Sbjct: 442 --ARNATTIETGDWIVLQEG-------------------------DTQFVGYDTITTQAR 474
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
+ ++ ++ + ++ DKT YA GGQI D G +N
Sbjct: 475 ILRCRKVKQ------------KNTEYYQIVLDKTPFYAEMGGQIGDSGQLIDSNGIS--- 519
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+ I + ++H +++ T EVDAR R HT +HLL+ ALR
Sbjct: 520 -ISIIDTKCENNLVIH---IINQLPENLYDTFNAEVDARKRRATECNHTATHLLHEALRL 575
Query: 662 VL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRHMRAS 719
VL T QK V S+ DFS + + ++ + +EK I I + + ++RH+
Sbjct: 576 VLGTHVEQKGSYVSSEVLRFDFSHF-KKVTEKEIRQLEKIITKKIRQNIALEEKRHIPLV 634
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
E L + + E Y ++V +I S E C GTH +TG+I + +I S +
Sbjct: 635 EARRLGAIALFY-EKYEENVRVIKFGS-----SIELCGGTHTTSTGYIGNFRIISEFSIS 688
Query: 780 HGVRSIKCLTGD 791
G+R I+ +T +
Sbjct: 689 AGIRRIEAITAE 700
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
I D ++ F N+GM QFK+V LG Y R+AN QKC+RV GKHNDL G D+YHHT
Sbjct: 28 IIKNDPTLMFTNAGMNQFKDVILGNALVKYTRIANVQKCLRVNGKHNDLEEVGHDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FEMLGNWSF DY+K++A A E+LT+ + L DRLY T
Sbjct: 88 MFEMLGNWSFGDYFKKEAIEYAWEYLTE-ILKLDKDRLYVTI 128
>gi|255039401|ref|YP_003090022.1| alanyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
gi|254952157|gb|ACT96857.1| alanyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
Length = 886
Score = 348 bits (894), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 242/796 (30%), Positives = 387/796 (48%), Gaps = 93/796 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR +FLD+F + + H +V S+P+V D ++ F NSGM QFK+ FLG P R
Sbjct: 1 MTSHQIRQAFLDFFRSKE-HLIVPSAPLVAKNDPTLMFNNSGMAQFKDFFLGNGTPPSRR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT
Sbjct: 60 IADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEAIAWAWELLTD-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY + F G++ G+P D+E D+W + V + I K NFWEMG TGPCG
Sbjct: 119 LPKDRLYVSVFEGNEADGVPFDQEAWDLWKGI-VGEERIILGNKKDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ S + VN D ++EIWN+VF+ +R + +++PL ++DTG+
Sbjct: 178 SEIHIDLRSPAEVAEVSGKSLVNNDHPQVVEIWNLVFMQFERKADGSLIPLPSTHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +Q KTS YDTD+F + +E +SG K YG+ ++ D + R++SD+
Sbjct: 238 GFERLCMAIQQKTSNYDTDVFQNTINVLETLSG-KKYGQ----NDEPFADIAMRVISDHI 292
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++ A+ D P A +R ++R A+ Q +L +AE DV+
Sbjct: 293 RAVSFAITDGQLPSNVKAGYVIRRILRRAVRYGYSYLGF-QEPFFHKLVPVLAEQFKDVF 351
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
E++D + ++ EE + F ++ +K ++ ++E GL
Sbjct: 352 TELKDQEEFVTRVILEEEKSFLRTLESGLKRLDSIIGG---------LKETGL------- 395
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
I GD F L DT+G ++ +A K + ++ L E K+RS+
Sbjct: 396 ----------NTIPGDEVFELSDTFGFPVDLTALIAREKNFRIDEAGYQDALAEQKKRSR 445
Query: 485 AKAASNVPD-IDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
AA D I+L + YD+ +T+S
Sbjct: 446 QDAAKEATDWIELRESDGVEF----LGYDFE-ETHS------------------------ 476
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG-- 601
H +++ + ++ + ++ D+T YA GGQ+ D G L + ++E+G
Sbjct: 477 --HIVKYRK-------VKTKAGEEYHIVLDRTPFYAEMGGQVGDTGALLLNSGSKEDGAR 527
Query: 602 KVEIGELASLEGKIVHFG---NVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
+ I + VH N+ + +T+++ V+ R ++ HT +HL+ ++
Sbjct: 528 SISIVDTKKENDLFVHISRDKNLDEALSGAGIVTAQINVERRNKIKS--NHTATHLMLSS 585
Query: 659 LRRVLTCTYQKSCRVFSDEC-ALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
+R VL + +DE DF+ + + ++ + + +E +N+ I + ++ R
Sbjct: 586 MREVLGTHVSQKGSYLNDEVLRFDFAHFSK-VTDEELRKIEDRVNEKIRENIALEERRNV 644
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
+ T GE Y D V LI K S E C GTHV +TG I I S
Sbjct: 645 PIQQALDAGATATFGEKYGDFVRLIIFDPK---FSFELCGGTHVPSTGEIGVFKFISEGS 701
Query: 778 YNHGVRSIKCLTGDSS 793
+ GVR ++ +TG+ +
Sbjct: 702 VSAGVRRVEAVTGEKA 717
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+ D ++ F NSGM QFK+ FLG P R+A++QKC+RV GKHNDL G D+YHHT
Sbjct: 28 VAKNDPTLMFNNSGMAQFKDFFLGNGTPPSRRIADTQKCLRVSGKHNDLEDVGFDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FEMLGNWSF DY+K++A A E LT LP DRLY +
Sbjct: 88 MFEMLGNWSFGDYFKKEAIAWAWELLTD-VYKLPKDRLYVS 127
>gi|258404449|ref|YP_003197191.1| alanyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
gi|257796676|gb|ACV67613.1| alanyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
Length = 880
Score = 348 bits (894), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 250/791 (31%), Positives = 375/791 (47%), Gaps = 98/791 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL+YF QGH +VKSSP+VP D S+ F N+GM QFK VFLG Y R
Sbjct: 2 VTAAEIRQRFLEYFAR-QGHEIVKSSPLVPKDDPSLLFTNAGMVQFKKVFLGQDKRNYVR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
SQKC+RVGGKHNDL GR + HHTFFEMLGN+SF DY+KR+A A FLT+ +
Sbjct: 61 ATTSQKCLRVGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKREAVDFAWRFLTE-ELG 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP DRLY + + D+E ++W E+ G+P + I + G K NFW MG TGPCG
Sbjct: 120 LPKDRLYASVY--------REDDEAYELWKEIAGLPDERIYRLGEKDNFWSMGDTGPCGP 171
Query: 191 SSEIHYD----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEI D M P + DR +EIWN+VF+ R ++ T+ PL + IDTG
Sbjct: 172 CSEILIDQGSHMSCGPECEIGVCECDR--FLEIWNLVFMQFDRDASGTMTPLPQPSIDTG 229
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ER+ + Q S +DTDLF L+ T + +G YG+ +++T+ R++ D+
Sbjct: 230 MGLERIAAVCQGVYSNFDTDLFSGLIRTTAERAGV-VYGKD------EEINTALRVIGDH 282
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
SR + LAD + P + LR ++R A + ++ L S ++E +GD
Sbjct: 283 SRAVAFMLADGILPSNEGRGYVLRRLIRRAFRFGR-LIGLRDPFLFDVCSQVVSE-MGDD 340
Query: 364 YPEIQDSIN-KIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ ++ ++++ EE R L K + L Q
Sbjct: 341 YPELHETAAFMVKVVRQEEERFGTTLDKGLALLEEELESLQ------------------- 381
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
T++ G +AF LYDT+G +I+ ++A A+ T+ F++ + KER
Sbjct: 382 --------GAGQTQVPGGVAFKLYDTFGFPIDIVNDVAEARGFTVDEAGFQEHMQAQKER 433
Query: 483 SKAK-AASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQV 540
SKA + S D M + + + + D+ Y+T T+ + ++ D
Sbjct: 434 SKAAWSGSGATD---MAARFVALLEAGVQSDFVGYET--------LQSTSRIAALLKD-- 480
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
G + + N + L+ +T Y +GGQ+ D G
Sbjct: 481 ------------DGQEVQELAAGENGY--LVTARTPFYGESGGQVGDSG-----RVIGPR 521
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
G + + ++ V + + + VD R+ R HT +HLL+AALR
Sbjct: 522 GDGAVLDTIKPAAQLTVHSITVKQGSLAVDDEAELIVDEGERVATARNHTVTHLLHAALR 581
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
VL Q V SD D + + + L+ + + AVE +N I V+ HM S
Sbjct: 582 EVLGEHVKQAGSLVASDRLRFDLT-HIQALTAEEIQAVEDKVNQSILADTPVESAHMDYS 640
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
+ + GE Y D+V +IDI +SRE C GTH+ TG ++ + +
Sbjct: 641 Q-AVQGGAVALFGEKYEDEVRVIDIPG----VSRELCGGTHLRATGQAGFFCILSEAAVS 695
Query: 780 HGVRSIKCLTG 790
GVR I+ TG
Sbjct: 696 AGVRRIEAATG 706
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D S+ F N+GM QFK VFLG Y R SQKC+RVGGKHNDL GR + HHT
Sbjct: 29 VPKDDPSLLFTNAGMVQFKKVFLGQDKRNYVRATTSQKCLRVGGKHNDLENVGRTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLY 916
FFEMLGN+SF DY+KR+A A FLT+ + LP DRLY
Sbjct: 89 FFEMLGNFSFGDYFKREAVDFAWRFLTE-ELGLPKDRLY 126
>gi|393781631|ref|ZP_10369825.1| alanyl-tRNA synthetase [Bacteroides salyersiae CL02T12C01]
gi|392676235|gb|EIY69673.1| alanyl-tRNA synthetase [Bacteroides salyersiae CL02T12C01]
Length = 872
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 258/793 (32%), Positives = 378/793 (47%), Gaps = 109/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K R SF ++F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKETRDSFKNFF-ESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNHPAKYHR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVD-VLK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L + LY T F GS + GL D E W + +P+DHI NFWEMG TGPCG
Sbjct: 120 LNPEHLYATVFEGSPEEGLERDNEAASYWEQF-LPKDHIINGNKHDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P+ A+ VN D +IEIWN+VF+ + R + ++ L IDT
Sbjct: 179 SEIHIDLR--PAEERAKVSGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLESLPAKVIDT 236
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL LQ KTS YDTD+F P+++ I K++G + YG+ D + R+++D
Sbjct: 237 GMGFERLCMALQGKTSNYDTDVFQPMIKAIAKMAGVE-YGKD------KQQDIAMRVIAD 289
Query: 306 YSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++ D P A +R ++R A+ KQ + K L I + +GD
Sbjct: 290 HIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGRKQAFMYKLLPVLI-DNMGD 348
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ ++ EE F LR L G++
Sbjct: 349 AYPELIAQKGLIEKVIKEEEEAF--LRT--------------------------LETGIR 380
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L K +A + TEISG AFTLYDT+G ++ + + +T+ F+ ++ + K
Sbjct: 381 LLDKTMADTKAAGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNIGEFDAEMQQQK 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+R++ AA D ++ T + YDY Y+ + RY
Sbjct: 441 QRARNAAAIETGDWIILK----EGTSEFVGYDYTEYEVSILRYR---------------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
I+ ++ ++ D T YA +GGQ+ D GV E
Sbjct: 481 -------------------QIKQKNQTLYQIVLDHTPFYAESGGQVGDTGV-----LVSE 516
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+++ + +H + P + VD R C H+ +HLL+ AL
Sbjct: 517 FETIDVIDTKKENNLPIHITKKLPEHPDAPMMAC---VDTDKRAACAANHSATHLLDEAL 573
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQVDRRHMR 717
R VL QK V D DFS + + ++ + + VE +N I AN + R++
Sbjct: 574 REVLGEHVEQKGSLVTPDSLRFDFSHF-QKVTDEEIRKVEHMVNAKIRANIPLKEYRNIP 632
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
E L + + GE Y D V +I S E C GTHV TG I ++ S
Sbjct: 633 IEEAKELGAIALF-GEKYGDHVRVIQFGS-----SVEFCGGTHVAATGSIGMIKIMSESS 686
Query: 778 YNHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 687 VAAGVRRIEAFTG 699
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNHPAKYHRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 93 LGNWSFGDYFKKEAISWAWEYL 114
>gi|436833433|ref|YP_007318649.1| alanyl-tRNA synthetase [Fibrella aestuarina BUZ 2]
gi|384064846|emb|CCG98056.1| alanyl-tRNA synthetase [Fibrella aestuarina BUZ 2]
Length = 886
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 254/797 (31%), Positives = 381/797 (47%), Gaps = 92/797 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR FLD+F ++GH +V S+P+V D ++ F NSGM QFK+ FLG P PR
Sbjct: 1 MTSSEIRRQFLDFF-RSKGHLIVPSAPLVAKNDPTLMFNNSGMAQFKDFFLGNGTPPAPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A + E LT
Sbjct: 60 VADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEALEWSWELLTG-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DR+Y + F G + G+P D+E DIW + D I K NFWEMG+TGPCG
Sbjct: 119 LPKDRIYVSVFKGDEADGVPFDQEAWDIWKGIIGSEDRIILGNKKDNFWEMGATGPCGPC 178
Query: 192 SEIHYDMKG----EPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ S VNAD ++EIWN VF+ R + ++ L ++DTG+
Sbjct: 179 SEIHIDLRSPEEVAKQSGKELVNADHPQVVEIWNNVFMQFNRKADGSLEGLPARHVDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +Q K S YDTD+F + IE++S GRT+T D + R+++D+
Sbjct: 239 GFERLCMAIQGKQSNYDTDVFSGTINLIEQLS-----GRTYTGQMEKS-DVAMRVIADHI 292
Query: 308 RMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQG---KLVKELSYNIAEILGDVY 364
R ++ A+AD + P + AK V+R L + G + +L +A DV+
Sbjct: 293 RAVSFAIADGLVP-SNAKAGYVIRRILRRAIRYGYSYLGFMEPFMTKLVPLLANQFADVF 351
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ + ++ EE F + L L+Q + L
Sbjct: 352 PELKAQQEFVATVIREEEIAF----------LRTLGTGLTRLDQI-----------IGQL 390
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
T + TEI G+ F L DT+G ++ +A + L + E F+ L + K RS+
Sbjct: 391 TGE-----GKTEIPGETVFELNDTFGFPADLTALIAREQHLQIDEEGFKAALAQQKARSR 445
Query: 485 AKAASNVPD-IDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
AAS+ D ++L D+ DK ++ + +T +
Sbjct: 446 KDAASSAGDWVELQDI-------DKVEFVGYDETEAY----------------------- 475
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
+++ R +Q + V ++ D+T YA +GGQI D G L + +
Sbjct: 476 -AQIVKYRR-------VQNKQGTQVQIVLDRTPFYAESGGQIGDTGTLELFESNVPKATL 527
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSR----VEVDARMRLGCMRAHTTSHLLNAAL 659
+ + +H V + L S ++D R H+ +HLL++AL
Sbjct: 528 TVLDTRKENDLSIHL--VADRPDLDELLQSTDLVFAKIDTHRRELTEDNHSATHLLHSAL 585
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R VL T QK V D DFS +G+ ++ + ++ VE +N+ I + +D +
Sbjct: 586 REVLGTHVAQKGSYVGPDALRFDFSHFGK-MTDEEISRVETIVNEKIRQNIPLDEKRNVP 644
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
E T + GE Y D V +I +V E C GTHV TG I + S
Sbjct: 645 IEQARAMGATALFGEKYGDFVRVITFDPNYSV---ELCGGTHVPATGQIGLFKLTSEGSV 701
Query: 779 NHGVRSIKCLTGDSSKA 795
+ GVR I+ T + + A
Sbjct: 702 STGVRRIEAKTSEGALA 718
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK+ FLG P PRVA++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFNNSGMAQFKDFFLGNGTPPAPRVADTQKCLRVSGKHNDLEDVGFDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A + E LT LP DR+Y +
Sbjct: 92 LGNWSFGDYFKKEALEWSWELLTG-VYKLPKDRIYVS 127
>gi|376316015|emb|CCF99418.1| alanyl-tRNA synthetase [uncultured Flavobacteriia bacterium]
Length = 871
Score = 348 bits (893), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 257/805 (31%), Positives = 376/805 (46%), Gaps = 124/805 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IRS FLD+F + H +V SSP+V D ++ F N+GM FK FLG + R
Sbjct: 1 MKSQEIRSQFLDFF-KEKSHQIVPSSPMVLKDDPTLMFTNAGMAPFKEYFLGNSIPKNAR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
++++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 ISDTQKCLRVSGKHNDLEEVGYDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTE-VYG 118
Query: 132 LPLDRLYFTYFGGS-DQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+ D LY T F GS D LP D+E DIW E+ +P D I + K NFWEMG GPCG
Sbjct: 119 ISQDILYVTIFEGSTDNDNLPIDQEAYDIWKEI-IPEDRILRGNKKDNFWEMGEQGPCGP 177
Query: 191 SSEIHYDMKGEPSSAL----ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH D++ + A + VN D ++EIWN+VF+ + R + + L +IDTG
Sbjct: 178 CSEIHVDIRTDQEKARVDGKSLVNMDHPQVVEIWNLVFMQYNRKATGELEELPSKHIDTG 237
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
LGFERL +LQ+ S YDTD+F+PL+ IE +S T+ + + D+ + R++ D+
Sbjct: 238 LGFERLCMVLQDVKSNYDTDIFIPLIREIEAISSV-----TYGENEKEDI--AIRVIVDH 290
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R + ++AD P T +R ++R A+ F K+ + L +++ +G
Sbjct: 291 VRAVAFSIADGQLPSNTGAGYVIRRILRRAVRYGF-TFLHKKEPFIYRLVDILSKKMGKA 349
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE+ I+ ++ EE F LR L+Q GLV
Sbjct: 350 FPELNTQKQLIENVIKEEETSF--LRT---------------LDQ-------GLV----- 380
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + E+SG AF LYDT+G ++ + K L + F ++ + KERS
Sbjct: 381 LLDTIINTADSKEVSGKKAFELYDTFGFPIDLTSLILREKGFVLNEDDFHVEMKKQKERS 440
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
++ + S+ TDD + L N +G
Sbjct: 441 RSASKSS--------------TDD----------------WTDLINNTEEGFVGYNSLEA 470
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTN 595
D R+ + + + Q + L+F+ T Y GGQ+ D G V Y+ N
Sbjct: 471 DVKITRYRKVSSKKEGDQYQ------LVFNHTPFYPEGGGQVGDKGYLEDSHGDVLYVLN 524
Query: 596 TTQENGKVEIGELASLEGKIVHF-----GNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
T +EN I+HF NV F VD + R H+
Sbjct: 525 TKKEN------------NVIIHFTKNLPKNVREPFTAV--------VDQKQRQRTSANHS 564
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+HLL+ ALR VL T QK V S DFS + + L+VD + VE ++N I ++
Sbjct: 565 ATHLLHQALREVLGTHVAQKGSAVHSKHLRFDFSHFSK-LTVDELRDVENFVNARIEGKL 623
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIES 769
+ + E + GE Y D V I S E C GTHV NT I
Sbjct: 624 PLIEKRAIPKEEAIADGAMSLFGEKYGDTVRSIRFGQ-----SVELCGGTHVTNTSDIWH 678
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSSK 794
+ + G+R I+ +T D++K
Sbjct: 679 FKIKSEGAVAAGIRRIEAITMDATK 703
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM FK FLG + R++++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMAPFKEYFLGNSIPKNARISDTQKCLRVSGKHNDLEEVGYDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ + D LY T
Sbjct: 92 LGNWSFGDYFKKEAISWAWELLTE-VYGISQDILYVT 127
>gi|118340595|gb|ABK80645.1| putative alanyl-tRNA synthetase class IIc [uncultured marine
Nitrospinaceae bacterium]
Length = 878
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 247/801 (30%), Positives = 381/801 (47%), Gaps = 119/801 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +R FL YF + +GHT+V S +VP D ++ F N+GM QFK+VFLG Y R
Sbjct: 1 MTGDELRKKFLQYFED-RGHTVVSSYALVPKNDPTLMFTNAGMVQFKDVFLGEEKRDYNR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ QKCVR GGKHNDL GR S HHTFFEMLGN+SF DY+K++A + EFLT +
Sbjct: 60 AVSVQKCVRAGGKHNDLEMVGRTSRHHTFFEMLGNFSFGDYFKKEAIQFGWEFLTDV-IG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLE-LGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP DRLY + F D++ +IW++ + +PR+ I K G K NFW MGSTGPCG
Sbjct: 119 LPRDRLYISVF--------EDDDDAFNIWVDDIKMPRERIYKLGEKDNFWAMGSTGPCGP 170
Query: 191 SSEIHYDMK-----GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI D G+PS V D + +EIWN+VF+ + R A + PL IDT
Sbjct: 171 CSEIFIDQGKAIGCGQPS---CEVGCDCDRFLEIWNLVFMQYDRDKAGKLTPLPHPCIDT 227
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ERL ++Q +T+ YDTDL + ++ +++G K YG+ + ++D S R+L+D
Sbjct: 228 GMGLERLAAVVQGRTTNYDTDLMMSIITVAARITG-KEYGK------QNEVDVSLRVLTD 280
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKE-------LSYN 355
++R ++D + P + LR ++R AL + GKL+++ ++
Sbjct: 281 HARASVFLISDGVIPSNEGRGYVLRKIIRRAL---------RHGKLLEQKGPFFHRITSK 331
Query: 356 IAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
+ E YPE+ + IQ ++ E F N + + +++
Sbjct: 332 VIEDFKGAYPELSGNSEFIQKVVINEEESFSNTLHYGTQRLEEIIE-------------- 377
Query: 416 GLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQK 475
++++D T I G+ F LYDTYG ++++E A LTL E + +
Sbjct: 378 -----------KVSKDKLCT-IPGEEIFKLYDTYGFPTDLVEETAKDAGLTLDMEGYTRA 425
Query: 476 LNELKERS----KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNL 531
+NE + ++ K VP + F + ++ + T + L
Sbjct: 426 MNEQRTKATNSWKGSGEKEVPPF----YREFLQSSAPTVFEGYGTTQGQGKILAILK--- 478
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
D + A +G I+ + DKT Y +GGQ D G A
Sbjct: 479 ------------DHAPVESASTGDEIE-----------FLTDKTPFYGESGGQTGDSGRA 515
Query: 592 YLTNTTQENGKVEIGELAS-LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ EN ++ + + L G IVH ++S + G T ++EV ++R H+
Sbjct: 516 -----SNENVQLSLDDATKPLPGLIVHKAKIISG-TMRNGETLKLEVHPQVRGNTALNHS 569
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+HLL AAL+ VL Q V SD D++ + + V +E +N+ I + +
Sbjct: 570 ATHLLQAALKEVLGEHIKQAGSLVASDRLRFDYTHFSPLTDKERV-RIESRVNEKIRDNI 628
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIES 769
QV + M + + GE Y D V ++D+ S+E C GTHV TG I
Sbjct: 629 QVATQEMDI-DTAIKEGAVALFGEKYGDTVRVVDVLG----FSKELCGGTHVNATGDIGL 683
Query: 770 CTVIGYKSYNHGVRSIKCLTG 790
+ S GVR I+ +TG
Sbjct: 684 FRITSEGSIASGVRRIEAVTG 704
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLG Y R + QKC+R GGKHNDL GR S HHT
Sbjct: 28 VPKNDPTLMFTNAGMVQFKDVFLGEEKRDYNRAVSVQKCVRAGGKHNDLEMVGRTSRHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K++A + EFLT + LP DRLY +
Sbjct: 88 FFEMLGNFSFGDYFKKEAIQFGWEFLTD-VIGLPRDRLYIS 127
>gi|237755762|ref|ZP_04584366.1| alanyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237692072|gb|EEP61076.1| alanyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 876
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 259/798 (32%), Positives = 389/798 (48%), Gaps = 100/798 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR SFL YF ++GHT+VKS+ I+P D ++ FVN+GM FKNVFLGL PY R
Sbjct: 4 MTADEIRQSFLKYF-ESKGHTIVKSASIIPENDPTLLFVNAGMVPFKNVFLGLEERPYKR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A+ QK RV GKHNDL G HHTFFEMLGN+SF DY+K++A A E+LT+ +
Sbjct: 63 AASCQKVFRVSGKHNDLENVGYTPRHHTFFEMLGNFSFGDYFKKEAIEFAWEYLTE-HLK 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+P ++L + F D+E +IW +G+ IK+ G K NFW MG TGPCG
Sbjct: 122 IPKEKLLVSVF--------EEDDEAFEIWNKHIGLDESKIKRMGYKDNFWSMGDTGPCGP 173
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SSEI+YD +GE + D +EIWN+VF+ + R + PL IDTG+G E
Sbjct: 174 SSEIYYD-RGEKFGSPEFGAEDDFRYLEIWNLVFMQYNRDEKGVLHPLPNPSIDTGMGLE 232
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ ++LQ S YDTDLF P+++ E+VSG K YG+ N D D + R+++D+ R I
Sbjct: 233 RIASVLQGVDSNYDTDLFKPIIQFAEEVSG-KEYGK-----NEKD-DIAMRVIADHLRAI 285
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYN----IAEILGDVYPE 366
T ++D + P R V ++ + K + K Y + E + YPE
Sbjct: 286 TFLISDGVLPANEG--RGYVLRRIIRRALRYG-KNLSIEKPFLYEGVDVVIEKMKTAYPE 342
Query: 367 IQDSINKIQLIL-GEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
+ + + I+ I EE + L+++ + + Y
Sbjct: 343 LIQNRSFIKTITKSEEEKFIKTLKRS---------------------------MDILYQM 375
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ AR + ++G+ AF LYDTYG ++++E+ + T F L E KER++
Sbjct: 376 IEQARKENRRHLTGEEAFKLYDTYGFPIDLMEEILKDEGFTFDLIEFHNLLEEQKERARK 435
Query: 486 KAASNVPDID--LMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
S +I + LK+ + Y+ NSK ++ I+ GDQ+
Sbjct: 436 SWKSQSKEIKPVYLTLKNKLPENQFVGYETLTSENSK----------VLAIIKGDQL--- 482
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
+ A+ G ++ ++ D T Y GGQ+ D G+ E
Sbjct: 483 ----VDTAKEGEDVE-----------IVLDITPFYPEKGGQVGDRGIIEGDEFLFEV--- 524
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
+ ++G IVH G V+ V G R +VD R MR HT +HLL+AALR VL
Sbjct: 525 -LDTQTPVDGLIVHKGKVLFG-SVKEGAYVRAKVDKERRENIMRHHTATHLLHAALRNVL 582
Query: 664 TCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
+++ + SDE DF+ + E+++ + + AVE+ +N I +V + M+ E
Sbjct: 583 GDHVKQAGSLVSDEYLRFDFTHF-ESMTDEELKAVEELVNREIMKNEEVVCQEMQYEE-A 640
Query: 723 FLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGV 782
+ I E Y D V +I IS+E C GTHV TG I ++ + + G
Sbjct: 641 LKSGAMAIFEEKYADVVRVISAG-----ISKELCGGTHVKRTGDIGYFKILSESAVSSGT 695
Query: 783 RSIKCLTGDSSKAAVENG 800
R I+ + G AVE G
Sbjct: 696 RRIEAVAGIK---AVEKG 710
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ FVN+GM FKNVFLGL PY R A+ QK RV GKHNDL G HHT
Sbjct: 31 IPENDPTLLFVNAGMVPFKNVFLGLEERPYKRAASCQKVFRVSGKHNDLENVGYTPRHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRL 915
FFEMLGN+SF DY+K++A A E+LT+ + +P ++L
Sbjct: 91 FFEMLGNFSFGDYFKKEAIEFAWEYLTE-HLKIPKEKL 127
>gi|365122418|ref|ZP_09339321.1| alanyl-tRNA synthetase [Tannerella sp. 6_1_58FAA_CT1]
gi|363642658|gb|EHL82004.1| alanyl-tRNA synthetase [Tannerella sp. 6_1_58FAA_CT1]
Length = 873
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 258/819 (31%), Positives = 393/819 (47%), Gaps = 107/819 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L +K IR SF +F N++GH +V S+P+V D ++ F N+GM QFK++ LG PA Y R
Sbjct: 2 LTAKEIRESFKSFF-NSKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNVPARYKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L +
Sbjct: 61 VADSQKCLRVSGKHNDLEEVGLDTYHHTMFEMLGNWSFGDYFKKEAIDWAWEYLVDI-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ DRLY T F G GL D E W E +P HI K NFWEMG TGPCG
Sbjct: 120 IDPDRLYATVFEGYAPEGLERDNEAASYW-EKHLPASHIINGNRKDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + A + VN +IEIWN+VF+ + R + ++ PL IDTG+
Sbjct: 179 SEIHIDLRSDAERAQIDGVTLVNESHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F P++ I ++ G K YG D + R+++D+
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPIIGAIGQLCG-KKYGED------RQADIAMRVIADHV 291
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I ++ D P A +R ++R A+ F + + L + + +GD Y
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGY-TFLGQHQAFIYTLIPTLIDTMGDAY 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ KI + + LR L G+K L
Sbjct: 351 PELIS--QKILIEKVIKEEEESFLRT--------------------------LATGMKLL 382
Query: 425 TKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
K +A ++ + I+G AFTLYDTYG ++ + + L++ + F+ ++ + KER
Sbjct: 383 DKVMADTKEAGMDCINGKDAFTLYDTYGFPLDLTELILKENGLSVDTKEFDAQMQQQKER 442
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
++ AA D + V + + ++ IG
Sbjct: 443 ARNAAAIETGDWVI-------VKEGEPRF------------------------IGYDFTE 471
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
D +R+ + I+ ++ ++ D+T YA +GGQ+ D G T E
Sbjct: 472 CDAEILRYRK-------IKQKNKELYQIVLDQTPFYAESGGQVGDTGT-----LTGEGET 519
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
++I +H + +T L + + +AR+ C H+ +HLL+ ALR V
Sbjct: 520 IKIINTKKENNLSIHISEKLPK-DITATLRAVINKEARLATAC--NHSATHLLHEALRTV 576
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRHMRASE 720
L T QK V D DFS + + ++ + + VE+ N + + + + R++ +E
Sbjct: 577 LGTHVEQKGSLVTPDILRFDFSHF-QKVTDEELRLVEQLANRKVRQAIPLNEHRNVPIAE 635
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+ + + GE Y D+V +I S E C GTHV NTG+I +I S
Sbjct: 636 AKQMGAMALF-GEKYGDEVRVIQYGS-----SIELCGGTHVANTGNIGMIRIISESSIAA 689
Query: 781 GVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIP 819
GVR I+ ++ ++ V+ + T + QI N N+P
Sbjct: 690 GVRRIEAVSAAKAEELVDFQQ--DTLKTIRQIFN--NVP 724
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA Y RVA+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKDIILGNVPARYKRVADSQKCLRVSGKHNDLEEVGLDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E+L + + DRLY T
Sbjct: 93 LGNWSFGDYFKKEAIDWAWEYLVD-ILKIDPDRLYAT 128
>gi|302389912|ref|YP_003825733.1| alanyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
gi|302200540|gb|ADL08110.1| alanyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
Length = 880
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 262/798 (32%), Positives = 381/798 (47%), Gaps = 115/798 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR FL +F ++GH V SS +VPY D ++ F N+GM QFK+VFLGL P+ R
Sbjct: 2 MTSSEIREKFLSFF-ESKGHVRVPSSSLVPYNDPTLLFTNAGMNQFKDVFLGLKKLPFTR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+QKCVR GGKHNDL GR + HHTFFEMLGN+SF DY+KRDA A EFLT+ +
Sbjct: 61 ATTAQKCVRAGGKHNDLDSVGRTARHHTFFEMLGNFSFGDYFKRDAIAYAWEFLTE-VLQ 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELG-VPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RL+ + + D+E +W E+ +P + I + G K NFW MG TGPCG
Sbjct: 120 LPKERLWVSIY--------ENDDEAFYLWQEVANIPPEKIIRLGEKDNFWAMGDTGPCGP 171
Query: 191 SSEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
SEI+ D +GE P + + DR E+WN+VF+ + R + PL + ID
Sbjct: 172 CSEIYID-RGEEHRCNSPECKIGVCDCDR--WRELWNLVFMQYNRDEHGNLTPLPRPSID 228
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYG--RTFTTSNRTDLDTSYRM 302
TG+G ER+ T++QN S YDTDL P++ +E ++G K YG R F +R+
Sbjct: 229 TGMGLERIATVMQNVYSNYDTDLLRPIIAFVENMTGKKYYGDERGF----------PFRV 278
Query: 303 LSDYSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI--- 359
++D+ R IT ++D + P R+ V +L F K+ L + Y I +
Sbjct: 279 IADHIRAITFLISDGVLPGNEG--RSYVLRRILRRAARFG-KELDLNRPFLYKIVPVVVS 335
Query: 360 -LGDVYPEIQDSINKIQLILG-EESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+GD YPEI+ + + IQ + EE R + L K L + ELE+ N
Sbjct: 336 LMGDAYPEIKKNQDYIQRVTKFEEERFHETLNDG----LKLLFEGMAELEEKN------- 384
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
I G+MAF LYDTYG ++ +++A K + EAFE+ +
Sbjct: 385 ----------------QKVIPGEMAFMLYDTYGFPLDLTEDVAREKGFNIDREAFEELME 428
Query: 478 ELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT-FPCLDTNL-VGIV 535
++R KAKAA + +PV + Y+ + + CL T V ++
Sbjct: 429 --RQRKKAKAARK---------EEYPVNE---LYEILAPMEPTIFVGYDCLSTEAQVELI 474
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
I + ++ E + L+ D+T Y AGGQ+ D G+ N
Sbjct: 475 ISGKEPVVEAD----------------EKAGEIILVLDRTPFYGEAGGQVGDTGIIENEN 518
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRV--EVDARMRLGCMRAHTTSH 653
T + + +GKI H G V F L RV VD R R H+ +H
Sbjct: 519 FTFRVRDTQ----RTPDGKIYHIGKVEKGF---IRLKERVTASVDEARRRDIARNHSATH 571
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
LL+ AL+ VL Q V D DFS + L+ D + +E +N I + + V
Sbjct: 572 LLHRALKDVLGEHVNQAGSLVAHDRLRFDFSHFA-ALTEDEIKKIEDLVNKAILDDLPVV 630
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
E + + GE Y + V ++ + + S+E C GTHV +T I +
Sbjct: 631 VEETTVEEAQKAGAIALF-GEKYGEKVRMVSMGN----YSKELCGGTHVSSTSKIGLFKI 685
Query: 773 IGYKSYNHGVRSIKCLTG 790
I S GVR I+ +TG
Sbjct: 686 ISESSVGAGVRRIEAVTG 703
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+PY D ++ F N+GM QFK+VFLGL P+ R +QKC+R GGKHNDL GR + HHT
Sbjct: 29 VPYNDPTLLFTNAGMNQFKDVFLGLKKLPFTRATTAQKCVRAGGKHNDLDSVGRTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA A EFLT+ + LP +RL+ +
Sbjct: 89 FFEMLGNFSFGDYFKRDAIAYAWEFLTE-VLQLPKERLWVS 128
>gi|347536929|ref|YP_004844354.1| alanyl-tRNA synthetase [Flavobacterium branchiophilum FL-15]
gi|345530087|emb|CCB70117.1| Alanine--tRNA ligase [Flavobacterium branchiophilum FL-15]
Length = 882
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 245/795 (30%), Positives = 376/795 (47%), Gaps = 91/795 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ +R FLD+F ++GH +V S+PIV D ++ F NSGM QFK FLG R
Sbjct: 1 MKSQDVRKQFLDFF-QSKGHLIVPSAPIVLKDDPTLMFNNSGMAQFKEYFLGNGTPKSKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K+DA A E LT+
Sbjct: 60 IADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKDAINWAWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY + F G+ +P D+E D+W EL V D I K NFWEMG GPCG
Sbjct: 119 IPKENLYVSVFEGNPDENVPFDQEAWDLWKEL-VDEDRIILGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E AL VN D ++EIWN VF+ R + ++ L ++DTG+
Sbjct: 178 SEIHVDLRSEEEKALVSGKSLVNNDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTT----SNRTDLDTSYRML 303
GFERL LQ KTS YDTD+F PL+E +E+++G + N+T++ + R++
Sbjct: 238 GFERLCMALQGKTSNYDTDVFGPLIEKVEQITGLQYTSNEIQNISEEQNKTNI--AIRVV 295
Query: 304 SDYSRMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
+D+ R + A+AD P T + + + F + + EL ++ L
Sbjct: 296 ADHVRAVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLNTKEPFIYELVAVLSNQLS 355
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
+ +PEI+ + + ++ EE F LR L+Q GL
Sbjct: 356 EFFPEIKSQQSLVTNVIREEEASF--LRT---------------LDQ-------GL---- 387
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
L + + + TEISG+ AF LYDT+G ++ + + L FE+ + E K
Sbjct: 388 -QLLENVMNQTAGTEISGEKAFELYDTFGFPIDLTALILRERGYQLDEAGFEKAMQEQKS 446
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
RS+A + + D ++ P +++ + K +D+ G++
Sbjct: 447 RSRAASEVSTEDWTVL----IPGNVEQFVGYDQTENEVKISRIRKVDSKKDGVL------ 496
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
++ D T Y GGQ+ D GV + E G
Sbjct: 497 --------------------------YQIVLDATPFYPEGGGQVGDKGVLTPALSKGE-G 529
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+EI + I+H + V+ ++V D +R R H+ +HL++ ALR
Sbjct: 530 AIEIIDTKKENNLILHIAKQLPE-NVSASFVAKVNTD--LRALSSRNHSATHLMHQALRS 586
Query: 662 VL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
+L T QK V + DFS + + ++ + + AVE ++N I Q+ + R +
Sbjct: 587 ILGTHVEQKGSLVNPNYLRFDFSHFAK-MTDEELQAVENFVNARIQEQLPLIERRSIPIQ 645
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+ GE Y D+V I + S E C G HV NT I ++ +
Sbjct: 646 QALDEGAMALFGEKYGDNVRAIKFGE-----SMELCGGIHVNNTAEIWHFKIVSEGAVAA 700
Query: 781 GVRSIKCLTGDSSKA 795
G+R I+ +T D+ KA
Sbjct: 701 GIRRIEAITSDAVKA 715
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK FLG R+A++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFNNSGMAQFKEYFLGNGTPKSKRIADTQKCLRVSGKHNDLEDVGFDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K+DA A E LT+ +P + LY +
Sbjct: 92 LGNWSFGDYFKKDAINWAWELLTE-VYKIPKENLYVS 127
>gi|86134548|ref|ZP_01053130.1| Alanyl-tRNA synthetase [Polaribacter sp. MED152]
gi|85821411|gb|EAQ42558.1| Alanyl-tRNA synthetase [Polaribacter sp. MED152]
Length = 873
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 259/805 (32%), Positives = 380/805 (47%), Gaps = 124/805 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR++FLD+F + H +V S+P+V D ++ FVNSGM FK FLG R
Sbjct: 1 MKSQDIRATFLDFF-QKKSHLVVPSAPMVTKDDPTLMFVNSGMAPFKEYFLGNATPKKNR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ +SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 ITDSQKCLRVSGKHNDLEEVGYDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLTEV-YK 118
Query: 132 LPLDRLYFTYFGGS-DQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+ D LY T F GS D L D E DIW E + D I K K NFWEMG GPCG
Sbjct: 119 IDKDILYVTVFEGSEDADQLNMDTEAYDIWKEY-IAEDRILKGNKKDNFWEMGEQGPCGP 177
Query: 191 SSEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH D++ A +N D ++EIWN+VF+ + R + T+ L +IDTG
Sbjct: 178 CSEIHVDIRSAEEKAKLDGRTLINEDHPQVVEIWNLVFMQYNRKANGTLEELPNKHIDTG 237
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERL +LQN S YDTD+F P++ I ++ YG+ + + D+ T R++SD+
Sbjct: 238 MGFERLCMVLQNVQSNYDTDVFTPIIREIGTITNT-SYGK----NEKQDIAT--RVISDH 290
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R + ++AD P T +R ++R A+ F K+ + L +++ +G
Sbjct: 291 VRAVAFSIADGQLPSNTGAGYVIRRILRRAVRYGF-TFLNKKEPFIYRLVSILSDKMGKA 349
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I+ ++ EE F LR L+Q GLVL
Sbjct: 350 FPELKSQKQLIENVIKEEETSF--LRT---------------LDQ-------GLVL---- 381
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
+ + EISGD F LYDT+G ++ + + K TL + FE++L + K RS
Sbjct: 382 -LDGIIENSKSKEISGDKVFELYDTFGFPIDLTALILSEKGYTLDEKGFEEELQKQKNRS 440
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+A + + D ++ DD + YD L+ N+
Sbjct: 441 RAASEMSTDDWTIL-------IDDAVEEFIGYD---------FLEANV------------ 472
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTN 595
R+ + + D + L+F+ T Y GGQ+ D G V Y+ +
Sbjct: 473 --KLTRYRKVTSKKDGEMYQ------LVFNLTPFYPEGGGQVGDKGYLEDTHGDVVYILD 524
Query: 596 TTQENGKVEIGELASLEGKIVHFG-----NVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
T +EN I+HF N+ ++FK VD + R HT
Sbjct: 525 TKKEN------------NVIIHFAKNLPQNLDANFKAV--------VDEKQRYRTECNHT 564
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+HLL+ ALR VL T QK V S DFS + + L+ + + VE ++N I+ ++
Sbjct: 565 ATHLLHQALREVLGTHVEQKGSAVHSKYLRFDFSHFSK-LTTEELQDVENFVNARISGKL 623
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIES 769
++ E + GE Y D V I S E C GTHV NTG I
Sbjct: 624 PLEESRNITMEKAIADGAMALFGEKYGDTVRAIKFGK-----SIELCGGTHVKNTGDIWH 678
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSSK 794
+ + G+R I+ +T D+ K
Sbjct: 679 FKIKSEGAVAAGIRRIEAITNDAVK 703
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ FVNSGM FK FLG R+ +SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFVNSGMAPFKEYFLGNATPKKNRITDSQKCLRVSGKHNDLEEVGYDTYHHTLFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ + D LY T
Sbjct: 92 LGNWSFGDYFKKEAIAWAWELLTE-VYKIDKDILYVT 127
>gi|414174612|ref|ZP_11429016.1| alanyl-tRNA synthetase [Afipia broomeae ATCC 49717]
gi|410888441|gb|EKS36244.1| alanyl-tRNA synthetase [Afipia broomeae ATCC 49717]
Length = 887
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 255/819 (31%), Positives = 396/819 (48%), Gaps = 105/819 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS++L+YF GH +V SSP+VP D ++ F N+GM QFKNVF GL PY R +SQ
Sbjct: 7 IRSAYLNYFAK-NGHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEKRPYQRATSSQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K A +A +TK LP D+
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKDRAIELAWNLITKE-YGLPKDK 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
L T + D+E +W ++ G+P I + G NFW+MG TGPCG SEI
Sbjct: 125 LLVTVY--------SEDDEAFGLWKKIAGLPESKIIRIGTSDNFWQMGDTGPCGPCSEIF 176
Query: 196 YD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
+D G P SA D + IEIWN+VF+ +++ V L K IDTG+G E
Sbjct: 177 FDHGDKIWGGPPGSA----EEDGDRFIEIWNLVFMQFDQIAPGNRVALPKPSIDTGMGLE 232
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +LQ K Y+ DLF+ L+ I +++GA P G + S R+++D+ R
Sbjct: 233 RIAAVLQGKHDNYEIDLFVALIRAIAELTGADPNG---------EQKASLRVIADHLRAS 283
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+ ++D + P + LR ++R A+ + + K+ L+ L + + +G YPE+
Sbjct: 284 SFLISDGVLPSNEGRGYVLRRIMRRAMRHGQ-LLGAKE-PLMYRLVWALVREMGQAYPEL 341
Query: 368 QDSINKIQLILG-EESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ N I+ L EE+R L + G+ L +
Sbjct: 342 VRAENLIEETLKLEETRFRKTLDR-----------------------------GLSILDE 372
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
+ A G+ AFTLYDTYG ++ Q+ + + + +F ++ ++R+KA+
Sbjct: 373 KSASLKKGDMFDGETAFTLYDTYGFPLDLTQDALRNRGIGVDIASFTDAMD--RQRAKAR 430
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A+ + FP+ + ++ YDT G+V D
Sbjct: 431 ASWAGSGDTATETIWFPLREKLGASEFLGYDTEVAE-----------GVVT---ALVKDG 476
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
+ A+SG S V ++ ++T YA +GGQ+ D GV T + +V I
Sbjct: 477 KEVDSAKSGDS-----------VAIVMNQTPFYAESGGQVGDTGV-----LTGDGVRVRI 520
Query: 606 GELASLEGKI-VHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT 664
+ G + VH G V V G+ ++EVD R H+ +HLL+ ALR+VL
Sbjct: 521 TDTQKKAGDLYVHLGTVEQG-TVKLGVPLQLEVDHGRRTAIRANHSATHLLHEALRQVLG 579
Query: 665 -CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPF 723
Q+ V + DF+ + + ++ + + +E NDV+ +V R M A +
Sbjct: 580 DHIAQRGSLVAPERLRFDFA-HNKPITAEELRRIEDIANDVVLENGEVVTRSM-AVDDAR 637
Query: 724 LTHLTVIPGEIYPDDVILIDI-SDKENVI--SREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+ + GE Y D+V ++ + + K N + S E C GTHV TG I ++ G +
Sbjct: 638 DSGARALFGEKYGDEVRVVSMGAGKGNALGWSVELCGGTHVRRTGDIGLISISGESAVAS 697
Query: 781 GVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIP 819
GVR I+ LTG++++ AV H + AA+ + ++P
Sbjct: 698 GVRRIEALTGNNARHAVNATIHTAKAAAAELKTTLDDLP 736
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFKNVF GL PY R +SQKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFTNAGMVQFKNVFTGLEKRPYQRATSSQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K A +A +TK LP D+L T
Sbjct: 89 FFEMLGNFSFGDYFKDRAIELAWNLITK-EYGLPKDKLLVT 128
>gi|301064400|ref|ZP_07204825.1| alanine--tRNA ligase [delta proteobacterium NaphS2]
gi|300441482|gb|EFK05822.1| alanine--tRNA ligase [delta proteobacterium NaphS2]
Length = 880
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 262/804 (32%), Positives = 389/804 (48%), Gaps = 125/804 (15%)
Query: 15 KSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVAN 74
+ IR FLDYF + H +V+SS ++P D ++ F N+GM QFKN FLG Y R A
Sbjct: 4 REIRQQFLDYF-SKHDHRIVESSSLIPRDDPTLLFTNAGMVQFKNAFLG-ENVGYTRAAT 61
Query: 75 SQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPL 134
+QKCVR GGKHNDL G HHTFFEMLGN+SF DY+K +A R E LT+ LP
Sbjct: 62 AQKCVRAGGKHNDLDNVGYTPRHHTFFEMLGNFSFGDYFKEEAIRWGWELLTE-GYGLPA 120
Query: 135 DRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSE 193
++L+ + + D+E DIW E+G+P D I + G K NFW MG TGPCG SE
Sbjct: 121 EKLHVSVY--------KDDDEAYDIWQKEIGLPADRIVRLGEKDNFWAMGDTGPCGPCSE 172
Query: 194 IHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
IH D PS R D + +EIWN+VF R + PL K IDTG+G
Sbjct: 173 IHIDQG--PSVGCGRPECACGCDCDRYLEIWNLVFTQFDRSPDGKLTPLPKPNIDTGMGL 230
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERL ++Q S YDTDLF ++ IE +S K YG SN +D ++R++SD++R
Sbjct: 231 ERLAAVIQGVKSNYDTDLFRDIITRIESLS-QKKYG-----SNER-MDVAFRVISDHARA 283
Query: 310 ITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVKELSYNIAEILG 361
++ + D + P + LR ++R A L ED+F ++ + ++ E++G
Sbjct: 284 VSFLIGDGIMPSNEGRGYVLRRIIRRASRFGQALGLEDIF-------LRSICDHVIELMG 336
Query: 362 DVYPEIQDSINKIQLILG----EESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
Y E+ + ILG EE R D LR + + + E+EQ
Sbjct: 337 RDYGEL---VRARSFILGVVENEERRFADTLRYS-------MKVLREEIEQL-------- 378
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
R+ I G++ F LYDTYGL+ ++++++A + L + E ++ +N
Sbjct: 379 ------------REKEKAAIPGEVVFKLYDTYGLAVDLVEDVARDENLGVDLEGYKDAMN 426
Query: 478 ELK----ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
+ E K + VP DL + +T YD T ++ ++
Sbjct: 427 RQRSLSQESWKGSGEAAVPKT-FRDLLNRNLTSRFTGYD----------TLEA-ESRILS 474
Query: 534 IVIGD-QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
+V+GD +V I K D Q +I D+T YA +GGQ+ D G+
Sbjct: 475 LVLGDLEVNTIYKG-----------DKAQ--------MILDQTAFYAESGGQVGDTGLIM 515
Query: 593 --LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
+ + EN + IVH G + +++ G + + VD R+ +H+
Sbjct: 516 NGIAHFRVEN------TFKYGQDLIVHEG-FLEEGELSVGDSVQASVDTAHRMAVAASHS 568
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+HLL+AALR +L Q RV DFS + + +S +++ VE+++ND I +
Sbjct: 569 ATHLLHAALREILGDHVKQAGSRVAPGRLRFDFSHFTQ-VSTENLIEVERWVNDRIRENL 627
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIES 769
+D R M E T I E Y D V ++DI + +SRE C GTH TG I
Sbjct: 628 PLDTRIM-DKEAAMKTGAMAIFEEKYGDKVRIVDIGEG---VSRELCGGTHTRRTGDIGV 683
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSS 793
++ + VR I+ LTG S+
Sbjct: 684 FRILSEGAVAANVRRIEALTGASA 707
Score = 109 bits (273), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFKN FLG Y R A +QKC+R GGKHNDL G HHT
Sbjct: 28 IPRDDPTLLFTNAGMVQFKNAFLG-ENVGYTRAATAQKCVRAGGKHNDLDNVGYTPRHHT 86
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K +A R E LT+ LP ++L+ +
Sbjct: 87 FFEMLGNFSFGDYFKEEAIRWGWELLTE-GYGLPAEKLHVS 126
>gi|240949596|ref|ZP_04753931.1| alanyl-tRNA synthetase [Actinobacillus minor NM305]
gi|240295854|gb|EER46530.1| alanyl-tRNA synthetase [Actinobacillus minor NM305]
Length = 874
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 258/813 (31%), Positives = 389/813 (47%), Gaps = 123/813 (15%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR SFLD+F ++GHT+V SS +VP D ++ F N+GM QFK+VFLGL PY R
Sbjct: 3 TTSEIRQSFLDFF-QSKGHTVVDSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEM+GN+SF DY+K+DA + E+LT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKQDAIQFGWEYLTSPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEG-------MKCNFWEMG 183
LP ++LY T + D+E DIW ++ GVP DHI + G NFW MG
Sbjct: 122 LPKEKLYVTVY--------ETDDEAYDIWHKIVGVPADHIIRIGDNKGAPYASDNFWAMG 173
Query: 184 STGPCGYSSEIHYDMKGEPSSALARV-NADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
TGPCG +EI YD + L D + IE+WNIVF+ R + T+ L K
Sbjct: 174 DTGPCGPCTEIFYDHGDKYWGGLPGTPEEDGDRFIEVWNIVFMQFNRQADGTMEKLPKPS 233
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT-SYR 301
+DTG+G ER+ ++Q+ S Y+ D+F L++T+ ++ K DLD S R
Sbjct: 234 VDTGMGLERMTAVMQHVNSNYEIDIFQTLIKTVAELLNVK------------DLDNKSLR 281
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAE 358
+++D+ R + +AD + P + LR ++R A+ ++ K+ K L +A+
Sbjct: 282 VIADHIRSCSYLIADGVVPSNEGRGYVLRRIIRRAVRHG-NILGAKEAFFYK-LVPTLAQ 339
Query: 359 ILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
++G + IQ L + E EQF E GL
Sbjct: 340 VMGHAGEIVAQKQAHIQKTL------------------------KAEEEQFARTLERGLA 375
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
L LTK + +SGD+AF LYDTYG ++ ++ + + + FE ++
Sbjct: 376 LLEDALTKVENKT-----LSGDVAFKLYDTYGFPLDLTADVCRERNIAIDEAGFEAEMQA 430
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
+ER AKA+SN +D + D K + YD + T L +N
Sbjct: 431 QRER--AKASSNFG----VDYNNVIKVDGKTNF-IGYDNLTAEATVVGLFSN-------- 475
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG------VAY 592
G ++D I+ NA + I D+T YA GGQ+ D G +
Sbjct: 476 ---------------GNAVDVIKSGENAII--ILDQTPFYAEMGGQVGDSGRISTEFCQF 518
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
TQ+ G+V G + LE + G+ V++ EV A R H+ +
Sbjct: 519 NVADTQKYGQV-FGHIGQLEAGELKVGDKVTA-----------EVAAERRHSIQLNHSAT 566
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL++ALR+VL + QK V DFS E ++ + + +E+ +N I +QV
Sbjct: 567 HLLHSALRKVLGSHVMQKGSLVNEKGLRFDFS-QPEAITKEQLEEIERIVNAKIRENIQV 625
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
M E + + GE Y D V ++D+S V S E C GTHV TG I
Sbjct: 626 VIEEMGIEEAKAKGAMALF-GEKYGDIVRVVDMS----VFSIELCGGTHVKRTGDIGLFK 680
Query: 772 VIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLS 804
+ + GVR ++ +TG+++ A + N + ++
Sbjct: 681 LTSEGAVAAGVRRVEAITGEAALAWLHNLQQMT 713
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL PY R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+K+DA + E+LT P + LP ++LY T
Sbjct: 89 FFEMMGNFSFGDYFKQDAIQFGWEYLTSPQWLGLPKEKLYVT 130
>gi|352081860|ref|ZP_08952702.1| alanyl-tRNA synthetase [Rhodanobacter sp. 2APBS1]
gi|351682766|gb|EHA65862.1| alanyl-tRNA synthetase [Rhodanobacter sp. 2APBS1]
Length = 880
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 267/835 (31%), Positives = 391/835 (46%), Gaps = 121/835 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IRS+FLDYF ++GHT+V SS +VP D ++ F NSGM QFKNVFLG Y R
Sbjct: 1 MKTSDIRSAFLDYF-RSKGHTIVPSSSLVPASDPTLLFTNSGMVQFKNVFLGSEKLSYVR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A+ Q+C+R GGKHNDL G + HHTFFEMLGNWSF DY+KRDA A E LT+
Sbjct: 60 AADVQRCLRAGGKHNDLDAVGYTARHHTFFEMLGNWSFGDYFKRDAIAYAWELLTQ-VFK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP D+L+ T + D+E DIW ++GVP + I + G NFW+M
Sbjct: 119 LPADKLWVTIY--------HTDDEAFDIWNKQVGVPAERIVRIGDNKGAPYASDNFWQMA 170
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S + D + IEIWN+VF+ R T+ PL
Sbjct: 171 DTGPCGPCTEIFYDHGAAIAGGPPGSP----DEDGDRYIEIWNLVFMQFDRAPDGTLSPL 226
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
+DTG+G ERL +LQ+K S Y+ DLF L+ +++G K G +
Sbjct: 227 PAPCVDTGMGLERLAAVLQHKHSNYEIDLFAHLIRVAGELTGTKDLG-----------NK 275
Query: 299 SYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVK-QGKLVKELSYNIA 357
S R+++D+ R + + D + P + + R + + +G ++ +
Sbjct: 276 SLRVIADHIRACSFLIVDGVLPSNEGRGYVLRRIIRRALRHGWMLGVRGDFFWKMVQPLV 335
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
E +G+ YPE+ +++ + D LR E +F E G+
Sbjct: 336 EEMGEAYPELP----------AKQAFVEDALRT--------------EEHRFGETLEHGM 371
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
L K A T ISG AF LYDTYG ++ ++A + L + FEQ +N
Sbjct: 372 RLFDDIANKSRAAKSGET-ISGVDAFRLYDTYGFPVDLTADIARERGLEVDMAGFEQAMN 430
Query: 478 ELKERSKA----KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
E + R++A +A +P +LK P Y+ + ++G
Sbjct: 431 EQRARARAAGKFEAKGQMPAELASELK--PTIFLGYE------------ALQSEGSKVLG 476
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
IV R G +D QL LI D+T YA +GGQ+ D G L
Sbjct: 477 IV----------------RGGKQVD--QLGEGEEGLLILDRTPFYAESGGQVGDTGT--L 516
Query: 594 TNTTQENGKVEIGELASLEGKIV-HFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+N G+ E+ + + G H G + G T VDA R + H+ +
Sbjct: 517 SNAA---GRFEVADTLKMGGVFFGHAGRWHGGRPLRTGDTVEARVDASRRQAIVLNHSAT 573
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL+AALR+VL T QK V + DFS + + +S D VA VE +N +
Sbjct: 574 HLLHAALRQVLGTHVAQKGSLVAPERLRFDFSHH-KPMSHDEVARVEAMVNAEVRRNAAA 632
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
+ +M + + + GE Y D+V ++ + D S E C GTHV TG I
Sbjct: 633 EVHNMGYDQAIEFGAMALF-GEKYGDEVRVLKMGD----FSTELCGGTHVGRTGDIGLFK 687
Query: 772 VIGYKSYNHGVRSIKCLTGDSSKA-AVENGKHLSTAASFSQILNVGNIPYGDDSI 825
++ GVR I+ +TG + A V+ + L A F+Q+L+ GD+++
Sbjct: 688 IVSEAGVASGVRRIEAVTGAGALAWVVDEERRL---AEFAQLLS----SSGDEAV 735
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFKNVFLG Y R A+ Q+C+R GGKHNDL G + HHT
Sbjct: 28 VPASDPTLLFTNSGMVQFKNVFLGSEKLSYVRAADVQRCLRAGGKHNDLDAVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGNWSF DY+KRDA A E LT+ LP D+L+ T
Sbjct: 88 FFEMLGNWSFGDYFKRDAIAYAWELLTQ-VFKLPADKLWVTI 128
>gi|408675247|ref|YP_006874995.1| alanyl-tRNA synthetase [Emticicia oligotrophica DSM 17448]
gi|387856871|gb|AFK04968.1| alanyl-tRNA synthetase [Emticicia oligotrophica DSM 17448]
Length = 883
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 245/819 (29%), Positives = 393/819 (47%), Gaps = 103/819 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR +FLD+F ++ H +V S+P+V D ++ F NSGM QFK+ FLG P R
Sbjct: 1 MTSHEIRKAFLDFF-KSKEHLIVPSAPLVAKNDPTLMFNNSGMAQFKDFFLGNGTPPSKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A + E LT+
Sbjct: 60 IADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEALEWSWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP +R+Y + F GS G+P D+E DIW EL + I K NFWEMG TGPCG
Sbjct: 119 LPKERIYVSVFEGSKDDGVPFDQEAFDIWKELIGDENRIILGNKKDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + S VN D +IEIWN VF+ +R + ++V L ++DTG+
Sbjct: 179 SEIHIDLRDQAEIDMISGKELVNKDHPQVIEIWNNVFMQFERKADKSLVLLPAKHVDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +Q K S YDTD+F ++ IE++SG K YG T S +D + R+++D+
Sbjct: 239 GFERLCMAIQGKKSNYDTDVFQNTIQVIEQMSG-KKYGENGTLSTNNYVDVAMRVIADHI 297
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R + +AD P A +R ++R A+ + + K L +A+ +V+
Sbjct: 298 RAVAFTIADGQLPSNAKAGYVIRRILRRAVRYGYSYLGFDEPFMTK-LVPVLADQFAEVF 356
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ + + ++ EE + F + +K+ +++ Q E+ ++
Sbjct: 357 PELKAQQDFVGRVIEEEEKSFLRTLETGLKKLDDIIE-QATAEKKDV------------- 402
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
ISG++ F L DT+G ++ +A K + E F++ L E K+RS+
Sbjct: 403 ------------ISGEVVFELSDTFGFPSDLTALIAREKGFKIDEEGFQKALQEQKDRSR 450
Query: 485 AKAASNVPD-IDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+A D ++L + F +G
Sbjct: 451 KDSAKEATDWVELNEGSDFE-------------------------------FVGYDEVSA 479
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN-------T 596
+ I++ + ++ + ++ D+T YA GGQ+ D G + N T
Sbjct: 480 EAQIIKYRK-------VKTKAGEEYHIVLDRTPFYAEMGGQVGDTGHIIIGNHSVKIKDT 532
Query: 597 TQENGK-VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
+EN + I +L+ + + G VV+ +D R HT +HL+
Sbjct: 533 KKENDLFIHISTDNNLDVILQNAGTVVA------------HIDEARRDKIRVNHTVTHLM 580
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
AA+R+VL T QK + DFS + + ++ + + +E +N I + ++ +
Sbjct: 581 LAAMRQVLGTHIVQKGSYQDDNITRFDFSHFAK-VTDEELGKIEDIVNAKIQENIPLETK 639
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
T GE Y D V ++ K S E C GTHV +TG I I
Sbjct: 640 VNMPIADAIALGATATFGEKYGDFVRVVIFDPK---FSVELCGGTHVSSTGKIGIFKFIS 696
Query: 775 YKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQIL 813
S + GVR ++ LTG ++ A++ + L+ ++ ++L
Sbjct: 697 EGSVSAGVRRVEALTGGTAIASI--NEQLAVSSQLKEML 733
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+ D ++ F NSGM QFK+ FLG P R+A++QKC+RV GKHNDL G D+YHHT
Sbjct: 28 VAKNDPTLMFNNSGMAQFKDFFLGNGTPPSKRIADTQKCLRVSGKHNDLEDVGFDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FEMLGNWSF DY+K++A + E LT+ LP +R+Y +
Sbjct: 88 MFEMLGNWSFGDYFKKEALEWSWELLTE-VYKLPKERIYVS 127
>gi|443242017|ref|YP_007375242.1| alanyl-tRNA synthetase [Nonlabens dokdonensis DSW-6]
gi|442799416|gb|AGC75221.1| alanyl-tRNA synthetase [Nonlabens dokdonensis DSW-6]
Length = 907
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 253/804 (31%), Positives = 378/804 (47%), Gaps = 110/804 (13%)
Query: 7 SSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP 66
+S R+ SK IR +FLD+F N + H +V S+P+V D ++ F N+GM QFK FLG +
Sbjct: 29 ASVARMKSKQIRQTFLDFFENKK-HQIVASAPMVIKNDPTLMFTNAGMNQFKEYFLGNSD 87
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
RVA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT
Sbjct: 88 PKNNRVADSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIAWAWELLT 147
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ + D LY T F G L D E D W EL + D I NFWEMG+ G
Sbjct: 148 E-VYGIDKDCLYVTIFEGDKSENLNRDTEAYDYWKEL-IAEDRILNGNKADNFWEMGAQG 205
Query: 187 PCGYSSEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
PCG SEIH D++ + A VN D ++EIWN+VF+ + R++ + L +
Sbjct: 206 PCGPCSEIHVDIRSDEEKAKVDGATLVNMDHPQVVEIWNLVFMQYNRMADGNLKNLPAQH 265
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRM 302
+DTG+GFERL +LQN S YDTD+F PL+ IE ++G YG+T D + R+
Sbjct: 266 VDTGMGFERLAMVLQNVQSNYDTDVFTPLIREIETITG-HSYGKT------EQEDIAIRV 318
Query: 303 LSDYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEI 359
++D+ R ++ ++AD P A +R ++R A+ + K+ + +L +++
Sbjct: 319 IADHLRAVSFSIADGQLPSNNGAGYVIRMILRRAIRYGF-TYLGKKEPFIYQLVNTLSKQ 377
Query: 360 LGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
+GD +PE++ N I ++ EE F LR E GL L
Sbjct: 378 MGDAFPELKSQKNLILNVIKEEEASF--LRTL----------------------ENGLAL 413
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
+ + + D +T + G AF L DTYG K + + + + L + + F + L +
Sbjct: 414 -LDSMVASMKND-GVTVLDGKKAFELNDTYGFPKELTRLILSEHGLQMDEDGFAKALKKQ 471
Query: 480 KERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+E S+ +A+ D + DD ++ YD L G V
Sbjct: 472 QEGSRKASATETSDWTTLR------EDDTQEF-VGYD-------------RLSGDV---- 507
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VA 591
I R S +L ++F+ T Y +GGQ D G
Sbjct: 508 -------RISKYRKVVSKKDGELYQ-----IVFNMTPFYGESGGQTGDKGYIESASGDTV 555
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTT 651
Y+ +T +ENG+ VH + P +V VDA R HT
Sbjct: 556 YIIDTKKENGQT------------VHLTKNLPKELDGP---FKVTVDAHQRARTAANHTA 600
Query: 652 SHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ 710
+HLL+ ALR++L T QK V S DFS + + ++ + + +E ++N I Q+
Sbjct: 601 THLLHQALRKILGTHVEQKGSMVRSASLRFDFSHFSK-VTKEELVEIENFVNARIREQLP 659
Query: 711 VDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESC 770
++ + + GE Y D V I + S+E C GTHV NT I
Sbjct: 660 LEENRNNTYDQAIAEGAIGLFGEKYGDVVRTIKFGE-----SQELCGGTHVKNTADIWHF 714
Query: 771 TVIGYKSYNHGVRSIKCLTGDSSK 794
+ + G+R I+ +T D+ K
Sbjct: 715 KITNETAVASGIRRIEAITSDAVK 738
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 69/108 (63%), Gaps = 7/108 (6%)
Query: 798 ENGKHLSTAASFSQILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCI 857
EN KH A++ I N D ++ F N+GM QFK FLG + RVA+SQKC+
Sbjct: 48 ENKKHQIVASAPMVIKN-------DPTLMFTNAGMNQFKEYFLGNSDPKNNRVADSQKCL 100
Query: 858 RVGGKHNDLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK 905
RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 101 RVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIAWAWELLTE 148
>gi|300778975|ref|ZP_07088833.1| alanine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
gi|300504485|gb|EFK35625.1| alanine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
Length = 867
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 243/816 (29%), Positives = 387/816 (47%), Gaps = 99/816 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FLDYF + + H +V S+PIV D ++ F NSGM QFK+ FLG PR
Sbjct: 1 MTSQEIRQKFLDYFKSKE-HLIVPSAPIVLKDDPTLMFSNSGMTQFKDFFLGYKTPTAPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 IADTQKCLRVSGKHNDLDDVGRDTYHHTMFEMLGNWSFGDYFKKEAIAFAWELLTEV-YG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F G L D+ D W + + D I K NFWEMG +GPCG
Sbjct: 119 IPKENLYVTIFEGDASENLDRDQNAYDFW-KSHISEDRIINGNKKDNFWEMGESGPCGPC 177
Query: 192 SEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ A ++ VN D ++E+WN+VF+ R + ++ L ++DTG+
Sbjct: 178 SEIHIDLRTPEEKAAVPGISLVNKDHPQVVEVWNLVFMEFNRKADKSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ K+S YDTD+F PL+ +E++SG K +T + D + R++ D+
Sbjct: 238 GFERLCMALQGKSSNYDTDVFTPLIAKVEELSGKK-----YTGILEDEKDIAIRVVVDHI 292
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++ A+AD P + +R ++R + S +K+ L K L + E +G +
Sbjct: 293 RAVSFAIADGQLPSSGGAGYVIRRILRRGISYSYRFLGMKEPFLYK-LVAVLQEQMGPFF 351
Query: 365 PEIQDSINKI-QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
PEI+ + ++I EE + + E GL+ K
Sbjct: 352 PEIEKQGKLVTEVIKSEEDSFLNTI-------------------------ETGLIRVEKL 386
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
+ + +A + + + F LYDTYG ++ + +A K LT+ E F+ + + ++RS
Sbjct: 387 IQQTIADNQKV--LPTLEVFELYDTYGFPDDLTRIIAEEKGLTIDEEGFKAEREKQRKRS 444
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+ +A V Y + L+ V DQ+
Sbjct: 445 QQDSAQKV------------------------------YDWVVLEEKPESFVGYDQIES- 473
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
+ + R+ + ++ + + ++ + Y GGQ+ D GV L N +
Sbjct: 474 ETYITRYRK-------VENKDGEFYQVVLSSSPFYPEGGGQVGDKGV--LENAAE---SF 521
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
++ E G I+ ++++ G +V+A R H+ +HLL+ ALR VL
Sbjct: 522 QVLETKKENGLII---SLINGLPKDAGALFYAKVNASERKNSQANHSVTHLLHEALRDVL 578
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
T QK V D DFS + + ++ + +A +E+ +N I + + +
Sbjct: 579 GTHVEQKGSYVGPDYLRFDFSHFNK-MTEEEIALIEEKVNHKIKESIALQEFRSIPIQEA 637
Query: 723 FLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGV 782
+ GE Y D+V +I S+E C GTHV NT I + S G+
Sbjct: 638 LDKGAMALFGEKYGDNVRMIQFGS-----SKELCGGTHVKNTSEIGHFKITSEGSAAAGI 692
Query: 783 RSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNI 818
R I+ ++GD S+ +N + T SQ+L ++
Sbjct: 693 RRIEAISGDKSEEYFKNLEKQIT--ELSQLLKSKDV 726
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK+ FLG PR+A++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFSNSGMTQFKDFFLGYKTPTAPRIADTQKCLRVSGKHNDLDDVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGDYFKKEAIAFAWELLTE-VYGIPKENLYVT 127
>gi|154321327|ref|XP_001559979.1| hypothetical protein BC1G_01538 [Botryotinia fuckeliana B05.10]
Length = 952
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 261/822 (31%), Positives = 394/822 (47%), Gaps = 103/822 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R FL +F H++V SS +VP+ D ++ F N+GM QFK +FLG A R
Sbjct: 15 VRKQFLSFF-EKNAHSVVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTVGKTDDMAQLKR 73
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
++QK DL G+DSYHHTFFEMLGNWSF DY+K DA MA E LTK
Sbjct: 74 AVDTQK---------DLDDVGKDSYHHTFFEMLGNWSFGDYFKADAIGMAWELLTKV-YG 123
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY TYF G + +P D E +++WL+ GV DHI MK NFWEMG TGPCG
Sbjct: 124 LDSDRLYVTYFEGDAENNVPADTEAKNLWLKAGVKEDHILTGNMKDNFWEMGETGPCGPC 183
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
SEIHYD G +A VN D +++EIWNIVFI R ++ L +IDTG+G+ER
Sbjct: 184 SEIHYDRIGGGRNAAHLVNQDDPNVLEIWNIVFIQFDRQKDRSLKTLPAKHIDTGMGYER 243
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV++LQ+K+S YDTD+F PL I++V+ A+PY + + +DT+YR+++D+ R++T
Sbjct: 244 LVSVLQDKSSNYDTDVFSPLFAKIQEVTNARPYTDKYGKDDTDGIDTAYRVVADHIRLLT 303
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
A++D P+ + +R V+R + F + G ++ + E +G+ +PEI
Sbjct: 304 FAISDGGVPNNEGRGYVVRRVLRRGSRYARKYFNAEIGSFFSKILPALVEQMGEQFPEIV 363
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
++ IL EE F L++ M E +K TK+L
Sbjct: 364 KKQQDVKEILDEEEEAFART-----------------LDRGEKMFEKYAAQAIKTNTKKL 406
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKL-------TLCHEAFEQKLNELKE 481
SG + LYDT+G +++ + +A + L + E + +KE
Sbjct: 407 ---------SGADVWRLYDTFGFPEDLTKIMAEERGLETDEGEIEIAKEKAREASKSVKE 457
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
+ A +V I +D P +D K+ SK + T + ++ + F
Sbjct: 458 AAHTFAKLDVHQIAELDNMGIPRPNDDAKF-------SKGDS-----TGKIQLIYDGKNF 505
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
+S A L ++ G++ DKTN YA GGQ+ D G + +
Sbjct: 506 L---------KSTAD-----LPNDKPFGILLDKTNFYAEQGGQVFDTGKIIIDGVAE--- 548
Query: 602 KVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
++ + + G IVH G + FK G E D R HT +H+LN ALR
Sbjct: 549 -FKVLDTQAYGGYIVHNGYMDYGDFKA--GDEVICEYDELRRQPIRNNHTGTHILNHALR 605
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
L QK V ++ DFS + +++ + VE N I ++ + +
Sbjct: 606 EHLGEDINQKGSLVDQEKLRFDFS-HKAQVTLPELKKVEDSANSYIKQNCKIYSKDVDLD 664
Query: 720 ELPFLTHLTVIPGEIYPD-----------DVILIDISDKE-NVISREPCCGTHVFNTGHI 767
+ + + GE YP+ DV+L + + E +S E C GTHV TG I
Sbjct: 665 IAKGIEGVRAVFGETYPNPVRVVSVGVEVDVLLAEPKNPEWRKVSVEFCGGTHVDQTGII 724
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSS----KAAVENGKHLST 805
+ ++ G+R I TGD++ + A+E GK ++
Sbjct: 725 KDLVIVEESGIAKGIRRIIAYTGDAAHEVQRIAMEFGKRIAA 766
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 61/105 (58%), Gaps = 15/105 (14%)
Query: 820 YGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDSY 874
+ D ++ F N+GM QFK +FLG A R ++QK DL G+DSY
Sbjct: 39 HNDPTLLFTNAGMNQFKPIFLGTVGKTDDMAQLKRAVDTQK---------DLDDVGKDSY 89
Query: 875 HHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
HHTFFEMLGNWSF DY+K DA MA E LTK L DRLY T+
Sbjct: 90 HHTFFEMLGNWSFGDYFKADAIGMAWELLTK-VYGLDSDRLYVTY 133
>gi|392536410|ref|ZP_10283547.1| alanyl-tRNA ligase [Pseudoalteromonas arctica A 37-1-2]
Length = 863
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 260/812 (32%), Positives = 383/812 (47%), Gaps = 118/812 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FLD+F + Q H +V SS ++P D ++ F N+GM QFK+VFLG PY R
Sbjct: 1 MTTAQIRQQFLDFFASKQ-HQIVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA + A EFLT+ VS
Sbjct: 60 ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVS 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L T + DEE W E+G+P D I + NFW MG TGPCG
Sbjct: 119 LPKEKLLVTIY--------HDDEEAFGYWANEIGLPEDRIIRIATSDNFWSMGDTGPCGP 170
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI YD G P S D + IEIWN+VF+ + R S T++PL K +DT
Sbjct: 171 CSEIFYDHGEHIWGGPPGSP----EEDGDRFIEIWNLVFMQYNRQSDGTMLPLPKQSVDT 226
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ILQ S Y+ DLF L+ V+ A+ D S R+++D
Sbjct: 227 GMGLERISAILQGVHSNYEIDLFQGLIAAAASVTNAQDMD-----------DKSLRVVAD 275
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R ++D + P + LR ++R A+ + QG +L + E +G
Sbjct: 276 HIRSCAFLISDGVMPSNEGRGYVLRRIIRRAVRHGNKLG--AQGSFFYKLVAALIEQMGQ 333
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ +L RI E EQF E GL +
Sbjct: 334 AYPELAKQQEIIEKVL----RI--------------------EEEQFGKTLERGLAI--- 366
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L + L+ D I GD+ F LYDTYG ++ ++A +++T+ H+ FE+ + +R
Sbjct: 367 -LEESLS-DLKGDIIPGDLVFKLYDTYGFPADLTADVARERQMTIDHQGFEECM--AVQR 422
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT-FPCLD-TNLVGIVIGDQV 540
A+ A K+ DY+ S ++T F D T+ VI ++
Sbjct: 423 KTAQQAG------------------KFGADYNDQLKSDKHTDFKGYDSTHYSATVI--EI 462
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGL-IFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
F A +++QL + G+ + D+T YA +GGQ D G T
Sbjct: 463 F-------------AGGEAVQLLEDGQQGIVVLDRTPFYAESGGQTGDTG-----TITVA 504
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
G+ + L H G V V + + ++ D R R + HT +H+L+ AL
Sbjct: 505 GGEFNVTNTTKLGNAFAHHGTVQGRIGVNDKVDATID-DTR-RDSIKKNHTATHILHEAL 562
Query: 660 RRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R++L QK V D DFS + E ++ D + +E+ +ND I ++ M
Sbjct: 563 RQLLGDHVGQKGSLVQPDRLRFDFSHF-EAVTKDELREIERVVNDEIRRNFALNTELMAI 621
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ + + GE Y D+V ++ I + S E C GTHV G I ++
Sbjct: 622 DDAKAKGAMALF-GEKYDDEVRVVTIGE----YSIELCGGTHVERAGDIGLFKIVSESGI 676
Query: 779 NHGVRSIKCLTGDSSKAAV-ENGKHLSTAASF 809
GVR I+ +TG + A V E + LS A+
Sbjct: 677 AAGVRRIEAVTGADAVAYVSEQEQQLSDVAAL 708
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 28 IPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQRCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K+DA + A EFLT+ VSLP ++L T
Sbjct: 88 FFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVSLPKEKLLVTI 128
>gi|189345755|ref|YP_001942284.1| alanyl-tRNA synthetase [Chlorobium limicola DSM 245]
gi|189339902|gb|ACD89305.1| alanyl-tRNA synthetase [Chlorobium limicola DSM 245]
Length = 888
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 250/811 (30%), Positives = 395/811 (48%), Gaps = 128/811 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR SFLD+F + H +V+S+P++P D ++ F N+GM QFK+VFLG PY R
Sbjct: 1 MKSREIRQSFLDFFAGKE-HKIVRSAPVIPADDPTLLFTNAGMNQFKDVFLGKGSRPYVR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A++QKC+R GKHNDL GRD+YHHTFFEMLGNWSF DYYK++A A E LT
Sbjct: 60 AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKKEAISWAWELLTS-VWK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RLY T F D+E+ +W + +P DHI + G K NFWEMG +GPCG
Sbjct: 119 LPKERLYATVF--------RDDDESFQLWQTVTDIPHDHILRFGEKDNFWEMGESGPCGP 170
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEIH D+ E S + VN +IE+WN+VFI + R + PL + ++DTG+GFE
Sbjct: 171 CSEIHIDLT-EDGSGKSLVNVGDYRVIELWNLVFIQYNRQGDGRLEPLPQRHVDTGMGFE 229
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ ++Q K S YDTD+F PL + I +++G + + D + R+++D++R +
Sbjct: 230 RVCAVMQGKGSNYDTDVFRPLFDRITEITGV-----VYKATMDDPCDIAMRVIADHARTL 284
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVKQG---KLVKELSYNIAEILGDVYPEI 367
T AL+D P + + R V +L + G ++ +L +A +G+ +PE+
Sbjct: 285 TFALSDGAMP--SNEGRGYVLRRILRRALRYSKTLGCSEPILHQLVGTLAVSMGEEFPEL 342
Query: 368 ---QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
Q+++++I + EE L + +E FN +
Sbjct: 343 VKQQETVSRI--VRAEEESFLATLDRG--------------IEIFNEV------------ 374
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
AR I+GD AF LYDT+G ++ + +AA + FE + E K R++
Sbjct: 375 -IAGARAAGAAAITGDDAFRLYDTFGFPLDLTRLMAAEAGFEVDEPGFEHCMQEQKTRAR 433
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT-FPCLD--TNLVGI-VIGDQV 540
D D + + +D ++ + + + +T + L+ +++ G+ ++ D+V
Sbjct: 434 Q---------DRKDKRQ--LQEDGGEWMWFSEERTSVFTGYDSLEELSSIAGVSMLPDRV 482
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
L+ D+T YA +GGQ D G
Sbjct: 483 L----------------------------LVLDRTPFYAESGGQSGDCGWIETAEY---- 510
Query: 601 GKVEIGELASLEGKIVHF----GNVVSSFKVTPG--------LTSRVEVDARMRLGCMRA 648
++++ + IVH + + P L R VD R G R
Sbjct: 511 -RLKVSDTRKDGDAIVHVVTEAHDTARDSAIDPADVSFDGGKLACRASVDRANRQGTERN 569
Query: 649 HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
HT +HLL+AALRR+L QK V ++ DFS + + L+ + +VE +N+ I +
Sbjct: 570 HTATHLLHAALRRILGQHVQQKGSFVSAERLRFDFSHFSK-LTSGELESVESEVNEQIRS 628
Query: 708 QVQVDRRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFN 763
V ++ ++P+ L G+ Y D V +++I +S E C GTHV +
Sbjct: 629 AETV----IKHQDVPYDEALGKGALAFFGDKYADRVRVVEIPG----LSIELCGGTHVDS 680
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSK 794
G I ++ S GVR I+ LTG +++
Sbjct: 681 IGQIGLFKIVSESSVASGVRRIEALTGKAAE 711
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG PY R A++QKCIR GKHNDL GRD+YHHT
Sbjct: 28 IPADDPTLLFTNAGMNQFKDVFLGKGSRPYVRAADTQKCIRASGKHNDLEDVGRDTYHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DYYK++A A E LT LP +RLY T
Sbjct: 88 FFEMLGNWSFGDYYKKEAISWAWELLTS-VWKLPKERLYAT 127
>gi|359435016|ref|ZP_09225250.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20652]
gi|357918322|dbj|GAA61499.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20652]
Length = 866
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 258/810 (31%), Positives = 377/810 (46%), Gaps = 114/810 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FLD+F + Q H +V SS ++P D ++ F N+GM QFK+VFLG PY R
Sbjct: 4 MTTAQIRQQFLDFFASKQ-HQIVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA + A EFLT+ VS
Sbjct: 63 ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVS 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L T + DEE W E+G+P D I + NFW MG TGPCG
Sbjct: 122 LPKEKLLVTIY--------HDDEEAFGYWANEIGLPEDRIIRIATSDNFWSMGDTGPCGP 173
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI YD G P S D + IEIWN+VF+ + R S T++PL K +DT
Sbjct: 174 CSEIFYDHGEHIWGGPPGSP----EEDGDRFIEIWNLVFMQYNRQSDGTMLPLPKQSVDT 229
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ILQ S Y+ DLF L+ V+ A+ D S R+++D
Sbjct: 230 GMGLERISAILQGVHSNYEIDLFQGLIAAAASVTNAQDMD-----------DKSLRVVAD 278
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R ++D + P + LR ++R A+ + QG +L + E +G
Sbjct: 279 HIRSCAFLISDGVMPSNEGRGYVLRRIIRRAVRHGNKLG--AQGSFFYKLVAALIEQMGQ 336
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ +L RI E EQF E GL + +
Sbjct: 337 AYPELAKQQEIIEKVL----RI--------------------EEEQFGKTLERGLAILEE 372
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L+ D I GD+ F LYDTYG ++ ++A +++T+ H+ FE+ + +R
Sbjct: 373 SLS-----DLKGDIIPGDLVFKLYDTYGFPADLTADVARERQMTIDHQGFEECM--AVQR 425
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
A+ A K +D+ K D H T+ K Y +V I G +
Sbjct: 426 KTAQQAG----------KFGADYNDQLKSDKH--TDFKGYDSTHYSATVVEIFAGGE--- 470
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGL-IFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
++QL + G+ + D+T YA +GGQ D G T G
Sbjct: 471 ----------------AVQLLEDGQQGIVVLDRTPFYAESGGQTGDTG-----TITVAGG 509
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+ + L H G V V + + ++ D R R + HT +H+L+ ALR+
Sbjct: 510 EFNVTNTTKLGNAFAHHGTVQGRIGVNDKVDATID-DTR-RDSIKKNHTATHILHEALRQ 567
Query: 662 VLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
+L QK V D DFS + E ++ D + +E+ +ND I ++ M +
Sbjct: 568 LLGDHVGQKGSLVQPDRLRFDFSHF-EAVTKDELREIERVVNDEIRRNFALNTELMAIDD 626
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+ + GE Y D+V ++ I D S E C GTHV G I ++
Sbjct: 627 AKAKGAMALF-GEKYDDEVRVVTIGD----YSIELCGGTHVERAGDIGLFKIVSESGIAA 681
Query: 781 GVRSIKCLTGDSSKAAV-ENGKHLSTAASF 809
GVR I+ +TG + A V E + L A+
Sbjct: 682 GVRRIEAVTGAEAVAYVSEQEQQLHDVAAL 711
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 31 IPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQRCVRAGGKHNDLENVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K+DA + A EFLT+ VSLP ++L T
Sbjct: 91 FFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVSLPKEKLLVTI 131
>gi|82701157|ref|YP_410723.1| alanyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
gi|123545319|sp|Q2YD40.1|SYA_NITMU RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|82409222|gb|ABB73331.1| alanyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
Length = 862
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 237/789 (30%), Positives = 378/789 (47%), Gaps = 106/789 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S +R FL++F T GHT+V SSP+VP D ++ F N+GM QFK+VFLG PY R
Sbjct: 1 MKSSEVRQKFLEFF-ETHGHTIVPSSPLVPGNDPTLLFTNAGMVQFKDVFLGQDKRPYVR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A++Q+CVR GGKHNDL G + HHTFFEMLGN+SF DY+KR+A R A EFLT +
Sbjct: 60 AASAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRNAIRFAWEFLTD-ILK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+P +RL+ T + D+E DIWL E+G+ + + NFW+MG TGPCG
Sbjct: 119 IPRERLWITVYA--------EDDEAADIWLNEVGIDSSRFTRIATQDNFWQMGDTGPCGP 170
Query: 191 SSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
SEI YD P NAD + +EIWN+VF+ + R SA T+ PL + +DTG+G
Sbjct: 171 CSEIFYDHGPEIPGGPPGTPNADGDRYVEIWNLVFMQYNRDSAGTLHPLPRPSVDTGMGL 230
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-DTSYRMLSDYSR 308
ER+ ++Q S Y+ DLF L++ + +N TDL +S +++D+ R
Sbjct: 231 ERISAVMQQVHSNYEIDLFQQLIKAAAR------------ATNTTDLSSSSLNVIADHIR 278
Query: 309 MITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGK-LVKELSYNIAEILGDVYPEI 367
+ +AD + P + + R +K+ Q + +L ++A ++G YPE+
Sbjct: 279 ACSFLIADGVIPGNEGRGYVLRRIIRRAIRHGYKLGQKQPFFHQLVEDLASVMGQAYPEL 338
Query: 368 QDSINKIQLILG-EESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
++ ++ +L EE R + L G++ L
Sbjct: 339 MEAKTRVSAVLKQEEERFAETLEN-----------------------------GMQVLEA 369
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
L R + + G+ F LYDT+G ++ ++A + + + F+Q + + +ER++
Sbjct: 370 ALRRGDRM--LDGETLFRLYDTFGFPLDLTADIARERGIAIDEAGFDQAMEQQRERAR-- 425
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
T K+ + TF ++ + QV I K
Sbjct: 426 ------------------TTSKFIMQEAIAYSGPSTTFHGYES----LRQEGQVLAIYKE 463
Query: 547 AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIG 606
G+ ++ I+ A + + DKT YA +GGQ+ D G NG +
Sbjct: 464 -------GSRVEFIEAGDEAVI--VLDKTPFYAESGGQVGDSG-----ELLAANGTFAVA 509
Query: 607 ELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-C 665
+ ++ + ++ S ++ G EVD R R H+ +HL++ ALR VL
Sbjct: 510 DTQKIQADVFGHKGLLRSGRLATGDAVLAEVDRAARARTERNHSVTHLMHKALREVLGHH 569
Query: 666 TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIANQVQVDRRHMRASELPFL 724
QK V +++ DF+ + + ++ + VE +N +++AN R M A E
Sbjct: 570 VQQKGSLVDANKTRFDFA-HNQPVTDAEIRKVEMLVNAEILANAATEAR--MMAIEDAKK 626
Query: 725 THLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRS 784
+ ++ GE Y D+V ++DI SRE C GTHV TG I ++ GVR
Sbjct: 627 SGAMMLFGEKYSDEVRVLDIG-----TSRELCGGTHVKRTGDIGLFKIVAESGVAAGVRR 681
Query: 785 IKCLTGDSS 793
++ +TG+ +
Sbjct: 682 VEAVTGERA 690
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLG PY R A++Q+C+R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLLFTNAGMVQFKDVFLGQDKRPYVRAASAQRCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KR+A R A EFLT + +P +RL+ T
Sbjct: 88 FFEMLGNFSFGDYFKRNAIRFAWEFLTD-ILKIPRERLWIT 127
>gi|374623830|ref|ZP_09696329.1| alanyl-tRNA synthetase [Ectothiorhodospira sp. PHS-1]
gi|373942930|gb|EHQ53475.1| alanyl-tRNA synthetase [Ectothiorhodospira sp. PHS-1]
Length = 872
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 260/826 (31%), Positives = 379/826 (45%), Gaps = 137/826 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IRSSFL+YF ++GH +V SSP+VP D ++ F N+GM QFK+VFLG PY R
Sbjct: 1 MKSADIRSSFLEYF-RSKGHEIVSSSPLVPGNDPTLLFTNAGMVQFKDVFLGREHRPYGR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+KRDA A E+LT +
Sbjct: 60 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEYLTV-VLK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKC-----NFWEMGST 185
+P +RL+ T + D+E DIW E+G+P + I + G K NFW+MG T
Sbjct: 119 MPAERLWVTVY--------QTDDEAYDIWTREIGIPLNRITRIGDKPGGGSDNFWQMGDT 170
Query: 186 GPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
GPCG +EI YD G P S D + IEIWN+VF+ + R + PL K
Sbjct: 171 GPCGPCTEIFYDHGPHVWGGPPGSP----EEDGDRYIEIWNLVFMQYDRDKDGNLNPLPK 226
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT-- 298
+DTG+G ERL ++Q S Y+ DLF LL + ++ G TD DT
Sbjct: 227 PSVDTGMGLERLAAVMQGVHSNYEIDLFQHLLAAVGRLVG-------------TD-DTHA 272
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGK-------LVK 350
S+++++D+ R + + D + P N R +L + G
Sbjct: 273 PSFKVIADHIRSCSFLITDGVMP------ANDGRGYVLRRIIRRAARHGHKLGLSEPFFH 326
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
+L + E++GD YPE LVK Q ++EQ
Sbjct: 327 KLVAPLVEVMGDAYPE--------------------------------LVKAQAQVEQVL 354
Query: 411 IMEE----PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLT 466
++EE L G+K+L + L R T I G + F LYDTYG ++ ++A K L
Sbjct: 355 LLEEQRFQETLEHGLKHLEEGLGRIADKT-IPGGLVFKLYDTYGFPVDLTGDIAREKGLE 413
Query: 467 LCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPC 526
L FE ++ + ++R++A + + D M + V D +
Sbjct: 414 LDMAGFEHEMEQQRDRARAASTFKMADAGAMAVG---VADSDF----------------- 453
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
+G + D +R A + L + ++ D T YA +GGQ+
Sbjct: 454 ---------VGYEAVAGDARVVRLAAGPDRLGCETLNESEEGSVVLDTTPFYAESGGQVG 504
Query: 587 DIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSS-FKVTPGLTSRVEVDARMRLGC 645
D GV G+ ++ + G +H G ++ K + +RV D R
Sbjct: 505 DTGV-----IEGPEGEFQVTDTVKQGGVFIHHGLMLRGCLKTGDPVHTRVNEDRRQ--AV 557
Query: 646 MRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
+ H+ +HLL+AALR VL QK V D DFS + E ++ D + +E +N
Sbjct: 558 VLNHSATHLLHAALREVLGEHVQQKGSLVAPDRLRFDFSHF-EPVTQDQIERLEAMVNRA 616
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNT 764
I V + R M E + GE Y D+V ++ + S E C G HV T
Sbjct: 617 IRANVAAEARIMPIKE-ALAAGAMALFGEKYGDEVRVLSLGG----FSTELCGGLHVQRT 671
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV-ENGKHLSTAASF 809
G I +I GVR I+ +TG+++ V E + LS AA
Sbjct: 672 GDIGVFKIISEGGVASGVRRIEAVTGENALQYVGETEQQLSRAAEL 717
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLG PY R SQ+C+R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLLFTNAGMVQFKDVFLGREHRPYGRATTSQRCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA A E+LT + +P +RL+ T
Sbjct: 88 FFEMLGNFSFGDYFKRDAIHYAWEYLTV-VLKMPAERLWVT 127
>gi|89071223|ref|ZP_01158404.1| alanyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
gi|89043236|gb|EAR49465.1| alanyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
Length = 885
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 255/803 (31%), Positives = 383/803 (47%), Gaps = 118/803 (14%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FLDYF QGH +V SSP+VP D ++ F NSGM QFKN+F G+ Y R +Q
Sbjct: 7 IRSTFLDYF-RRQGHEVVDSSPLVPRNDPTLMFTNSGMVQFKNLFTGVETRDYQRATTAQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + H TFFEMLGN+SF DY+K DA A E +TK + +P +R
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHLTFFEMLGNFSFGDYFKADAIPFAWEMVTK-ELDIPAER 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
L T + D+E ++W ++ G+P + I + NFW MG TGPCG SSEI
Sbjct: 125 LLVTVY--------HDDDEAAELWRKVAGLPDERIIRIATDDNFWMMGPTGPCGPSSEIF 176
Query: 196 YD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
+D G P S D + IEIWN+VF+ ++ T L+ IDTG+G E
Sbjct: 177 FDHGEKFWGGPPGSP----EEDGDRFIEIWNLVFMQFEQFEDGTRRELAAQSIDTGMGLE 232
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ ++LQ + ++TDLF +++ S T+++ L T +R+++D+ R
Sbjct: 233 RISSLLQGTNNVFETDLFRAIIDASAHASN--------TSTDEAHL-THHRVIADHLRST 283
Query: 311 TVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ +A+ + P + LR ++R A LL + D L+ L + + +G
Sbjct: 284 SFLIAEGVLPSNEGRGYVLRRIMRRAMRHAHLLGASD-------PLMHRLVPALVQQMGA 336
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+++ I+ L E F N L G+K
Sbjct: 337 AYPELREQQAMIEDTLETEEVRFRNT----------------------------LDRGLK 368
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L ++AR + + G+ AF LYDTYG ++ ++ + +++ F + E K +
Sbjct: 369 LLDDEVARLETGKNLPGETAFKLYDTYGFPLDLTEDALRERGISVDLPGFNASMEEQKRK 428
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
++A + + D F + D+ D+ YDT + QV
Sbjct: 429 ARAAWSGSGEAAD--QTVWFDIADEHGTTDFLGYDTETAE----------------GQVL 470
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
+ + R+GA A V ++ ++T YA AGGQ+ D G T E G
Sbjct: 471 ALVRDGAPVERAGA---------GAQVQIVLNQTPFYAEAGGQVGDAGT-----LTTETG 516
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA-HTTSHLLNAALR 660
EI + + G VHF V + ++ G +R+EVD R G +RA H+ +HLLN ALR
Sbjct: 517 TAEITDCRKIAGVYVHFARVTAG-EIAAGEGARLEVD-HARRGAIRANHSATHLLNEALR 574
Query: 661 RVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
VL Q+ D DFS + + + D +AAVE+ +N++I V R M
Sbjct: 575 NVLGDHVAQRGSLNAPDRLRFDFS-HNKAMGADDIAAVEREVNELIRQNAPVTTRIMTPD 633
Query: 720 ELPFLTHLTVIPGEIYPDD--VILIDISDKENVI-----SREPCCGTHVFNTGHIESCTV 772
E L + GE Y D+ V+ + I+D + S E C GTHV TG I +
Sbjct: 634 EARALGAQALF-GEKYGDEVRVVSMGIADTGKGLDGKTYSIELCGGTHVARTGDIGLFAL 692
Query: 773 IGYKSYNHGVRSIKCLTGDSSKA 795
+ GVR I+ LTG+++ A
Sbjct: 693 TTEAASAAGVRRIEALTGEAAMA 715
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFKN+F G+ Y R +QKC+R GGKHNDL G + H T
Sbjct: 29 VPRNDPTLMFTNSGMVQFKNLFTGVETRDYQRATTAQKCVRAGGKHNDLDNVGYTARHLT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA A E +TK + +P +RL T
Sbjct: 89 FFEMLGNFSFGDYFKADAIPFAWEMVTK-ELDIPAERLLVT 128
>gi|188996094|ref|YP_001930345.1| alanyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
gi|205830234|sp|B2V709.1|SYA_SULSY RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|188931161|gb|ACD65791.1| alanyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 876
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 259/798 (32%), Positives = 386/798 (48%), Gaps = 100/798 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR SFL YF ++GHT+VKS+ I+P D ++ FVN+GM FKNVFLGL PY R
Sbjct: 4 MTADEIRQSFLKYF-ESKGHTIVKSASIIPENDPTLLFVNAGMVPFKNVFLGLEERPYKR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A+ QK RV GKHNDL G HHTFFEMLGN+SF DY+K++A A E+LT+ +
Sbjct: 63 AASCQKVFRVSGKHNDLENVGYTPRHHTFFEMLGNFSFGDYFKKEAIEFAWEYLTE-HLE 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+P ++L + F D+E +IW +G+ IK+ G K NFW MG TGPCG
Sbjct: 122 IPKEKLLVSVF--------EEDDEAFEIWNKHIGLDESKIKRMGYKDNFWSMGDTGPCGP 173
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SSEI+YD +GE D +EIWN+VF+ + R + PL IDTG+G E
Sbjct: 174 SSEIYYD-RGEKFGNPEFGAEDDFRYLEIWNLVFMQYNRDEKGVLHPLPNPSIDTGMGLE 232
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ ++LQ S YDTDLF P+++ E+VSG K YG+ N D D + R+++D+ R I
Sbjct: 233 RIASVLQGVDSNYDTDLFKPIIQFAEEVSG-KEYGK-----NEKD-DIAMRVIADHLRAI 285
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYN----IAEILGDVYPE 366
T ++D + P R V ++ + G + K Y + E + YPE
Sbjct: 286 TFLISDGVLPANEG--RGYVLRRIIRRALRYGKNLG-IEKPFLYEGVDVVIEKMKTAYPE 342
Query: 367 IQDSINKIQLIL-GEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
+ + + I+ I EE + L+++ + + Y
Sbjct: 343 LIQNRSFIKTITKSEEEKFIKTLKRS---------------------------MDILYQM 375
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ AR + ++G+ F LYDTYG ++++E+ + T F L E KER++
Sbjct: 376 IEQARKENRRHLTGEETFKLYDTYGFPIDLMEEILKDEGFTFDLIEFHNLLEEQKERARK 435
Query: 486 KAASNVPDID--LMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
S +I + LK+ + Y+ NSK ++ I+ GDQ+
Sbjct: 436 SWKSQSKEIKPVYLTLKNKLPENQFVGYETLTSENSK----------VLAIIKGDQL--- 482
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
+ A+ G I+ ++ D T Y GGQI D G+ E
Sbjct: 483 ----VDTAKEGEDIE-----------IVLDITPFYPEKGGQIGDRGIIEGDEFLFEV--- 524
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
+ ++G IVH G V+ V G R + D R MR HT +HLL+AALR VL
Sbjct: 525 -LDTQTPVDGLIVHKGKVLFG-SVKEGAYVRAKTDKERRENIMRHHTATHLLHAALRNVL 582
Query: 664 TCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
+++ + SDE DF+ + E+++ + + AVE+ +N I +V + M+ E
Sbjct: 583 GDHVKQAGSLVSDEYLRFDFTHF-ESMTDEELKAVEELVNREIMKNEEVVCQEMQYEE-A 640
Query: 723 FLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGV 782
+ I E Y D V +I IS+E C GTHV TG I ++ + + G
Sbjct: 641 LKSGAMAIFEEKYADVVRVISAG-----ISKELCGGTHVKRTGDIGYFKILSESAVSSGT 695
Query: 783 RSIKCLTGDSSKAAVENG 800
R I+ + G AVE G
Sbjct: 696 RRIEAVAGIK---AVEKG 710
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ FVN+GM FKNVFLGL PY R A+ QK RV GKHNDL G HHT
Sbjct: 31 IPENDPTLLFVNAGMVPFKNVFLGLEERPYKRAASCQKVFRVSGKHNDLENVGYTPRHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRL 915
FFEMLGN+SF DY+K++A A E+LT+ + +P ++L
Sbjct: 91 FFEMLGNFSFGDYFKKEAIEFAWEYLTE-HLEIPKEKL 127
>gi|47213378|emb|CAF93331.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1043
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 200/518 (38%), Positives = 280/518 (54%), Gaps = 50/518 (9%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+RS+F+D+F GH LV SSP+ P GD S+ FVN+GM QFK + LG A Y R
Sbjct: 30 VRSTFVDFFQQKHGHVLVPSSPVRPRGDPSLLFVNAGMNQFKPLLLGTADPRSAMARYRR 89
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V NSQKCVR GGKHNDL GRD YHHTFFEMLG WSF DY+K +AC MA LT+
Sbjct: 90 VVNSQKCVRAGGKHNDLEDVGRDVYHHTFFEMLGTWSFGDYFK-EACLMAWSLLTEH-YG 147
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ +RLY +YFGG GLP DEETR IWL++GVP D + G+K NFWEMG +GPCG
Sbjct: 148 IAAERLYVSYFGGDTASGLPADEETRHIWLDIGVPHDRLLPFGLKDNFWEMGDSGPCGPC 207
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
+EIHYD G +A A VNAD DL+EIWN+VF+ + R ++ L + +DTG+G ER
Sbjct: 208 TEIHYDHVGGRRAA-ALVNADHPDLVEIWNLVFMQYNRELDGSLRLLPQLSVDTGMGLER 266
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
LV +LQ K S YDTDLF PLL I++ + +D +YR+++D+ R +
Sbjct: 267 LVRVLQGKRSNYDTDLFAPLLLAIQQAGPYG---GGVGPAGAGRVDVAYRVVADHVRALA 323
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
V +AD ++P + LR ++R A+ +V + G L L + ILGD YPE+
Sbjct: 324 VCIADGVYPGMSGAELVLRRILRRAVRFCSEVLQAPPGTLAS-LVPTVCHILGDAYPELH 382
Query: 369 DSINKIQLILGE-ESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ I I+ E E+ +L++ G L L KQ
Sbjct: 383 KEADTIVNIINENEAHFLSSLQR-------------------------GSRLIQHTLRKQ 417
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
+D +A++L+ G +++ + + + H+ +Q ++E K + ++
Sbjct: 418 DDKD---GVFPAAVAWSLHRDLGFPLDLVDLMLEERGFRVDHQELDQLISESKVQGGLQS 474
Query: 488 ASNVP-DIDLMDLKHF-----PVTDDKYKYDYHYDTNS 519
P +D++ L P TDD KY YH +
Sbjct: 475 HDRGPLTLDVLSLAELQRLRVPPTDDSLKYRYHLQGGA 512
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 70/106 (66%), Gaps = 7/106 (6%)
Query: 819 PYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRDS 873
P GD S+ FVN+GM QFK + LG A Y RV NSQKC+R GGKHNDL GRD
Sbjct: 54 PRGDPSLLFVNAGMNQFKPLLLGTADPRSAMARYRRVVNSQKCVRAGGKHNDLEDVGRDV 113
Query: 874 YHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG WSF DY+K +AC MA LT+ + +RLY ++
Sbjct: 114 YHHTFFEMLGTWSFGDYFK-EACLMAWSLLTE-HYGIAAERLYVSY 157
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 32/183 (17%)
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFS--------VYGETLSVD 692
RL CM HT +HLLN ALR+VL Q+ V + AL V LSV
Sbjct: 668 RLACMVKHTGTHLLNFALRKVLGPSVQQRGSHVSAHPPALGLQRPAAESCCVPQAALSVR 727
Query: 693 SVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTV----IPGEIYPDDV--------- 739
+ V+ + D+I+ QV + E+P T ++ E+YPD V
Sbjct: 728 ELQEVDALVRDIISADQQV-----HSQEVPLQTARSIRGLRTVDEVYPDPVRVVSVGVPV 782
Query: 740 --ILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG-DSSKAA 796
+L SD + + E CCGTH+ TG I ++ + G+ I +TG D+++
Sbjct: 783 SDLLDGQSDGQTSV--ELCCGTHLLRTGAIRDLVIVSERQVVKGMSRILAVTGQDATQVG 840
Query: 797 VEN 799
++
Sbjct: 841 AKD 843
>gi|71033767|ref|XP_766525.1| alanyl-tRNA synthetase [Theileria parva strain Muguga]
gi|68353482|gb|EAN34242.1| alanyl-tRNA synthetase, putative [Theileria parva]
Length = 1011
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 246/818 (30%), Positives = 404/818 (49%), Gaps = 115/818 (14%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R F+DYF ++ H SS ++P+ D ++ FVN+GM QFK++ +G +
Sbjct: 64 VRKQFIDYFV-SKNHVHWPSSSVLPHNDPTLLFVNAGMNQFKDIIMGKSDENSEFGKLKM 122
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V NSQKC+R GGKHNDL G+D YH T+FEMLGNWSF Y+K +A A + LT
Sbjct: 123 VCNSQKCIRAGGKHNDLEDVGQDCYHQTYFEMLGNWSFGAYFKPEAISYAWDLLTN-VYK 181
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L RLY TYFGG D D ETR+IWL+ +P + I G K NFWEM TGPCG
Sbjct: 182 LDPSRLYVTYFGGDD--SCEPDHETREIWLKF-LPSNRILPFGSKDNFWEMADTGPCGPC 238
Query: 192 SEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
+EIHYD + G +S+L VNAD +++E+WNIVF+ + R + L K +DTG+G E
Sbjct: 239 TEIHYDHIGGRDASSL--VNADDPNVVELWNIVFMQYNRSRNGVLERLPKGCVDTGMGLE 296
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RL ++L N S YDTDL L + I +S P ++ N + LD +YR++SD+ R +
Sbjct: 297 RLCSVLNNTNSNYDTDL---LNDVILYISELLPELESYKGGN-SPLDVAYRVVSDHIRCL 352
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+VA++D ++P + LR ++R A+ D F ++ + L +++++LG YP +
Sbjct: 353 SVAISDRVYPSNDGRGYVLRRILRRAVRYCRDYFNTRE-PFLHRLVRSVSKLLGHAYPNL 411
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
I+ ++ +E R+F V+++K +V
Sbjct: 412 VTERVNIESVVFDEERLFLQTLDKGVEKFKKMVAKS------------------------ 447
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
+ I+G AF LY +YG ++ +A + + + +L +++S+A+
Sbjct: 448 -----EVKVINGQDAFLLYQSYGFPLDLTMLMARELGIGVDVIGYYTELKLHQQKSEARI 502
Query: 488 ASNVPDID-----------------LMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
++ ++ ++ + + TDDK KYD+ ++ R F
Sbjct: 503 YTDFNSVESRCDRLLKSLSADRINTILQMCNNVYTDDKLKYDWD-SSDPVRKVFK---AK 558
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
L+ IV D + + ++ + + V L+ D+T YA GGQI D G
Sbjct: 559 LLSIVTADSI----------------LKELEYDSDDLVCLVTDRTPFYAEGGGQIYDTG- 601
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
Y+ + +E+ + L G + HF S + G ++VD R+ HT
Sbjct: 602 -YIND-------LEVLRVYKLSGLVFHFCLADESGLLRCGDECELKVDYHRRVKVASNHT 653
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+H+LN LR +L +YQ+ ++ ++ D+S YG+ L + + VE+ + + + +
Sbjct: 654 ATHILNFVLRDILEESSYQRGSQLDEEKLKFDYS-YGQQLPDNLIRQVEQRMMEFVRSGA 712
Query: 710 QVDRRHMRASELPFLTHLTVIPG------EIYPDDVILIDIS-DKENV----ISREPCCG 758
+R +E+ + L IPG E YP+ V ++++ E+ S E C G
Sbjct: 713 P-----LRTTEIEYKKALE-IPGIRANFDEKYPEVVRVVNVQMGSEDFSGEHTSTEVCGG 766
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
TH+ NT I+ V+G + + GVR + +T D + +
Sbjct: 767 THLTNTKTIQDVAVVGEEGISKGVRRLTIVTNDQCRRS 804
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ FVN+GM QFK++ +G + V NSQKCIR GGKHNDL G+D
Sbjct: 86 LPHNDPTLLFVNAGMNQFKDIIMGKSDENSEFGKLKMVCNSQKCIRAGGKHNDLEDVGQD 145
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YH T+FEMLGNWSF Y+K +A A + LT L RLY T+
Sbjct: 146 CYHQTYFEMLGNWSFGAYFKPEAISYAWDLLTN-VYKLDPSRLYVTY 191
>gi|372209529|ref|ZP_09497331.1| alanyl-tRNA synthetase [Flavobacteriaceae bacterium S85]
Length = 869
Score = 345 bits (884), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 249/798 (31%), Positives = 374/798 (46%), Gaps = 111/798 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FL++F + Q H +V S+P+V D S+ FVN+GM FK FLG R
Sbjct: 1 MKSQDIRKKFLEFFESKQ-HKIVPSAPMVLKDDPSLMFVNAGMVPFKEYFLGQKKVVNSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V +SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 VTDSQKCLRVSGKHNDLEEVGIDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLTEV-YK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ + LY T F G + GL D E ++W E + D I K NFWEMG+ GPCG
Sbjct: 119 IDKNSLYVTIFEGDESEGLERDLEAYEMWKE-HIAEDRILLGNKKDNFWEMGAQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ A VN D ++EIWN+VFI R + ++ L +IDTG+
Sbjct: 178 SEIHVDIRSAEEKAKVDGKELVNMDHPQVVEIWNLVFIQFNRKADGSLENLPNKHIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ TS YDTD+F PL+ +E +G FT ++D + R++SD+
Sbjct: 238 GFERLCMALQGVTSNYDTDVFTPLIHELESKTG-------FTYGKNEEIDIAIRVISDHV 290
Query: 308 RMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + A+AD P +T + + + F K+ + +L +A +GD +P
Sbjct: 291 RAVAFAIADGQLPSSTGAGYVIRRILRRAIRYGFTFLNKKDPFIYQLVDVLAHQMGDYFP 350
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
EI E K LV+ + E+ + + G LG L
Sbjct: 351 EIV--------------------------EQKQLVRNVMKEEEASFLRTLGQGLG---LL 381
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
++ + + E+SGD AF LYDT+G ++ + + K +L FE L + K RS+A
Sbjct: 382 DEVIANTTGEEVSGDKAFELYDTFGFPIDLTALILSEKGYSLNEAEFEAALEKQKNRSRA 441
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A ++D+ D D+ Y Y + + T
Sbjct: 442 AA-----EMDMDDWVILKEDADEEFIGYDYLKSPVKIT---------------------- 474
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
R+ + + D + L+F+ T Y GGQ+ D G V ++ +T
Sbjct: 475 ---RYRKITSKKDGELYQ------LVFNITPFYPEGGGQVGDRGFLEASNGNVTHIIDTK 525
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+EN I+H + V P T + VD + R H+ +HLL+
Sbjct: 526 KEN------------NLIIH---IAKHLPVNPTDTFKAVVDVKNRESSNCNHSATHLLHQ 570
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR +L T QK V ++ DFS + + L+ D + VE+++N I ++++
Sbjct: 571 ALRAILGTHVEQKGSLVNANYLRFDFSHFSK-LTADELEEVEEFVNSRIREKLELQEFRK 629
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + GE Y D V +I + S+E C GTHV NT +I + G
Sbjct: 630 IPMQEAIDKGAMALFGEKYGDMVRMIQFGN-----SKELCGGTHVANTNNIWHFKITGES 684
Query: 777 SYNHGVRSIKCLTGDSSK 794
+ GVR ++ +TG ++K
Sbjct: 685 AVAAGVRRVEAITGIAAK 702
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 58/84 (69%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D S+ FVN+GM FK FLG RV +SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPSLMFVNAGMVPFKEYFLGQKKVVNSRVTDSQKCLRVSGKHNDLEEVGIDTYHHTLFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTK 905
LGNWSF DY+K++A A E LT+
Sbjct: 92 LGNWSFGDYFKKEAIAWAWELLTE 115
>gi|376317143|emb|CCG00515.1| Alanyl-tRNA synthetase [uncultured Flavobacteriia bacterium]
Length = 870
Score = 345 bits (884), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 249/796 (31%), Positives = 374/796 (46%), Gaps = 111/796 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FL++F ++ H++V S+P+V D ++ F N+GM QFK FLG + R
Sbjct: 1 MKSQEIRDKFLEFF-KSKNHSIVASAPMVIKNDPTLMFTNAGMNQFKEFFLGNSIPKNTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V ++QKC+RV GKHNDL G+D+YHHT FEMLGNWSF DY+K +A A E LT+
Sbjct: 60 VTDTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKEEAISWAWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ D+LY T F G L D E ++W + +P I K NFWEMG GPCG
Sbjct: 119 IDKDKLYVTIFEGDSSENLERDTEAYNLWSK-HLPEARILNGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E A + VNAD ++E+WN+VFI + R + ++ L +IDTG+
Sbjct: 178 SEIHIDLRSEEEKAKVFGASLVNADHPQVVEVWNLVFIQYNRKANGSLENLPARHIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ+K S YDTD+F PL+ IE ++ +K + + TD+ + R+++D+
Sbjct: 238 GFERLCMALQDKKSNYDTDVFTPLIREIETITNSK-----YAVNEETDI--AIRVIADHV 290
Query: 308 RMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + ++AD P T + + + F + + +L + E +G +P
Sbjct: 291 RAVAFSIADGQLPSNTGAGYVIRRILRRAIRYGFTFLDTKEPFIYKLVAVLTEEMGKAFP 350
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ N I ++ EE + F LR L+Q GL+ L
Sbjct: 351 ELKKQENLIYNVIKEEEQSF--LRT---------------LDQ-------GLI-----LL 381
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ D + E+SG AF LYDTYG ++ + + K TL + F+ +L + K+RS+A
Sbjct: 382 DSIIADTTGKEVSGTKAFELYDTYGFPIDLTALILSEKGFTLDEKEFQAELQKQKDRSRA 441
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
D ++ DD + YDT + V
Sbjct: 442 AGKIEAGDWTVLQ-------DDAEEEFVGYDT------------------LKTPVKITRY 476
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
I A+ G D Q L+F+ T Y GGQ+ D G V Y+T+T
Sbjct: 477 RKINTAKEG---DQYQ--------LVFNLTPFYPEGGGQVGDKGYLESANGDVVYITDTK 525
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+EN I+H + + T VD + R HT +HLL+
Sbjct: 526 KEN------------NLIIH---ITKNLPEDIANTFTAVVDQKQRNRSAANHTATHLLHQ 570
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR +L T QK V S DFS + + ++ D + +E ++N I Q+ ++ +
Sbjct: 571 ALRSILGTHVEQKGSMVHSGYLRFDFSHFAK-VTADELKQIELFVNARIQEQLVLEEQRA 629
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + GE Y D V I S E C GTHV NTG I +
Sbjct: 630 IPYDQAIAEGAIALFGEKYGDAVRAIRFGK-----SMELCGGTHVANTGDIWYFKIKSEG 684
Query: 777 SYNHGVRSIKCLTGDS 792
+ G+R I+ +TGD+
Sbjct: 685 AVAAGIRRIEAITGDA 700
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG + RV ++QKC+RV GKHNDL G+D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEFFLGNSIPKNTRVTDTQKCLRVSGKHNDLEEVGKDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K +A A E LT+ + D+LY T
Sbjct: 92 LGNWSFGDYFKEEAISWAWELLTE-VYKIDKDKLYVT 127
>gi|298207536|ref|YP_003715715.1| alanyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
gi|83850172|gb|EAP88040.1| alanyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
Length = 870
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 248/797 (31%), Positives = 372/797 (46%), Gaps = 113/797 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR +FL++F ++ H++V S+P+V D ++ F N+GM QFK FLG R
Sbjct: 1 MTSQDIRKTFLEFF-KSKKHSIVTSAPMVIKDDPTLMFTNAGMNQFKEFFLGNGDPKSSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V ++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K +A A E LT+
Sbjct: 60 VTDTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKEEAIAWAWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ D LY T F G L D E D W + + D I K NFWEMG+ GPCG
Sbjct: 119 VNKDNLYVTIFEGDASESLERDTEAYDFW-KNHISEDRILNGNKKDNFWEMGAQGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + S VN D ++EIWN+VF+ R + ++ L ++DTG+
Sbjct: 178 SEIHVDLRSKEEKDKVSGAELVNEDHPQVVEIWNLVFMQFNRKADGSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ+KTS YDTD F PL++ IE ++ T+ +S +TD+ + R++SD+
Sbjct: 238 GFERLCMVLQDKTSNYDTDAFTPLIKEIETITAT-----TYGSSEKTDI--AIRVISDHV 290
Query: 308 RMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + ++AD P T + + + F + + +L + + +GD YP
Sbjct: 291 RAVAFSIADGQLPSNTGAGYVIRRILRRGIRYGFTFLNTKEPFIYKLVKTLTKQMGDAYP 350
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E+ N I ++ EE F LR L+Q GLVL +
Sbjct: 351 ELVKQENLIYNVIKEEESSF--LRT---------------LDQ-------GLVLLDNIIE 386
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
K ++ EISG AF LYDTYG ++ + + +L F+ +L + ++RS+
Sbjct: 387 KSKSK-----EISGKKAFELYDTYGFPIDLTSLILRERGFSLNEAEFDAELKKQRDRSRE 441
Query: 486 KAASNVPD-IDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
+ D + L+D D + + L+ QV
Sbjct: 442 ATKTETGDWVTLID-----------------DAEQEFIGYDHLEA---------QVKLTR 475
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNT 596
+ + + G L+F+ T YA GGQ+ D G V Y+ +T
Sbjct: 476 YRKVENKKDGEMYQ-----------LVFNLTPFYAEGGGQVGDKGYLESPDGDVVYIVDT 524
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+EN V VHF + P T + VD++ R+ HT +HLL+
Sbjct: 525 KKENNLV------------VHF---TKNLPKHPEATFKAVVDSKQRMRSASNHTATHLLH 569
Query: 657 AALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
ALR VL T QK V S DFS + + +S + + VE ++N I Q+ ++ +
Sbjct: 570 QALRSVLGTHVEQKGSMVHSGNLRFDFSHFSK-VSAEELTQVEDFVNARIREQLPLEEQR 628
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
+ + GE Y D V I S E C GTHV NT I +I
Sbjct: 629 NIPHQKALDEGAIALFGEKYGDAVRTIRFGK-----SMELCGGTHVNNTSEIRHFKIISE 683
Query: 776 KSYNHGVRSIKCLTGDS 792
+ G+R I+ ++ D+
Sbjct: 684 GAVASGIRRIEAISNDA 700
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG RV ++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEFFLGNGDPKSSRVTDTQKCLRVSGKHNDLEEVGIDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K +A A E LT+ + D LY T
Sbjct: 92 LGNWSFGDYFKEEAIAWAWELLTE-VYKVNKDNLYVT 127
>gi|387132980|ref|YP_006298952.1| alanine--tRNA ligase [Prevotella intermedia 17]
gi|386375828|gb|AFJ08706.1| alanine--tRNA ligase [Prevotella intermedia 17]
Length = 901
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 258/800 (32%), Positives = 383/800 (47%), Gaps = 110/800 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR SF +F ++GH +V S+P+V D ++ F N+GM Q+K++ LG T P PR
Sbjct: 17 MTANEIRDSFKKFF-ESKGHVIVPSAPMVIKDDPTLMFTNAGMNQWKDIILG-TKEPEPR 74
Query: 72 V-ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
A+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K +A A E+L
Sbjct: 75 RRADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKENAIDYAWEYLVDVLK 134
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
P D LY T F GS G+ D+E WL+ +P DHI NFWEMG TGPCG
Sbjct: 135 LNPAD-LYVTVFEGSPSEGIARDDEAAQYWLK-HLPADHIIDGNKHDNFWEMGETGPCGP 192
Query: 191 SSEIHYDMKG--EPSSALAR--VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH D + E + R VN D +IEIWNIVF+ +R S ++ PLS N IDTG
Sbjct: 193 CSEIHVDSRSAEEKAKTPGRELVNKDNPQVIEIWNIVFMQFQRKSDGSLEPLSMNVIDTG 252
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAK-----PYGRTFTTSNRTD-LDTSY 300
+GFERLV +LQ K S YDTD+F P ++ +E++SG K P G N + +D +
Sbjct: 253 MGFERLVRMLQGKNSNYDTDIFQPTIKEMERLSGKKYGFTTPSGENGEARNEQEKIDIAM 312
Query: 301 RMLSDYSRMITVALADNMFP---DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R+++D+ R + ++AD+ P A +R ++R A+ + K+ + K L+ I
Sbjct: 313 RVVADHMRAVAFSIADSQLPGNAKAGYVIRRILRRAVRYAYTFLDQKEAFIYKLLNTFIH 372
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
E +G+ YPE+ I ++ EE F LR L
Sbjct: 373 E-MGNAYPELTAQRELIARVIKEEEDSF--LRT--------------------------L 403
Query: 418 VLGVKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQK 475
G+ LT + + TE++G AF L+DTYG ++ + + ++ + FE++
Sbjct: 404 EKGINLLTNAMDEMKAQGKTELNGKEAFRLFDTYGFPLDLTELICREHGFSVDEKQFEEE 463
Query: 476 LNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGI 534
+ + ++++A+ A+ V + D + LK + YDY Y+ RY
Sbjct: 464 MEQ--QKARARNAAVVENGDWVVLKEG--EQEFVGYDYTEYECRILRYR----------- 508
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+ + N + L+ D T Y GGQ+ D GV L
Sbjct: 509 ------------------------KVTQKKNTFFELVLDHTPFYGEMGGQVGDQGV--LV 542
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
N E ++I + + +H +V VD R HT +HL
Sbjct: 543 N---EEETIDIVDTKRENNQSIH---IVKQLPKNAEADFMACVDTDKRDASAANHTATHL 596
Query: 655 LNAALRRVLT--CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
L+ AL++VL C QK V +D DFS + + ++ + + VE+ +ND+I +
Sbjct: 597 LDYALKQVLGEHCE-QKGSYVSADTLRFDFSHF-QKVTDEELRQVERIVNDMIRQDLP-- 652
Query: 713 RRHMRASELPFLTHLTVIP--GEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESC 770
R R + L + + GE Y D V +I S E C G H +TG I
Sbjct: 653 RGEYRDTPLEQAKEMGAVALFGEKYGDKVRVISFGP-----SCEFCGGIHATSTGRIGFF 707
Query: 771 TVIGYKSYNHGVRSIKCLTG 790
+I S G+R ++ LTG
Sbjct: 708 KIISESSVAAGIRRVEALTG 727
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 65/98 (66%), Gaps = 3/98 (3%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRV-ANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
D ++ F N+GM Q+K++ LG T P PR A+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 48 DPTLMFTNAGMNQWKDIILG-TKEPEPRRRADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 106
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K +A A E+L P D LY T
Sbjct: 107 MLGNWSFGDYFKENAIDYAWEYLVDVLKLNPAD-LYVT 143
>gi|365961192|ref|YP_004942759.1| alanyl-tRNA synthetase [Flavobacterium columnare ATCC 49512]
gi|365737873|gb|AEW86966.1| alanyl-tRNA synthetase [Flavobacterium columnare ATCC 49512]
Length = 878
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 250/802 (31%), Positives = 383/802 (47%), Gaps = 111/802 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR ++LD+F ++ H +V S+PIV D ++ F NSGM QFK FLG PR
Sbjct: 1 MKSQDIRKAYLDFF-ESKNHLIVPSAPIVLKDDPTLMFNNSGMAQFKEFFLGNGTPKNPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A EFLT+ +
Sbjct: 60 IADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEALAWAWEFLTE-VLK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY + F G+ +P D+E DIW + VP D I K NFWEMG GPCG
Sbjct: 119 LDKDRLYVSVFEGNPSENVPFDQEAFDIWKQY-VPEDRIILGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + S + VN D ++EIWN VF+ R + ++ L ++DTG+
Sbjct: 178 SEIHIDLRSDEERAKVSGRSLVNDDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFT--TSNRTDLDTSYRMLSD 305
GFERL +Q TS YDTD+F PL+E + +++ K T + ++ + R++ D
Sbjct: 238 GFERLCMAMQGVTSNYDTDVFTPLIEKVTQITHLKYTNNEVKDITEEQNKINIAIRVIVD 297
Query: 306 YSRMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+ R + A+AD P T + + + F K+ + EL +A +G
Sbjct: 298 HVRAVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLNKKEPFINELVAVLANQMGAF 357
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PEI+ N + ++ EE F LR LEQ G++
Sbjct: 358 FPEIKAQQNLVTQVIREEEASF--LRT---------------LEQ-----------GLQL 389
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L K +A + + E+ G+ F LYDT+G K++ + K + F+ +L + K RS
Sbjct: 390 LEKVVA-ETAENEVKGEKVFELYDTFGFPKDLTALILKEKGYSYNEAEFDTELEKQKARS 448
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+A + VT + +K +D N+ V DQ
Sbjct: 449 RAAS---------------EVTTEDWKV--------------LIDGNVETFVGYDQT--- 476
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
K+ ++ R +DS + ++ D T Y GGQ+ D G N T +
Sbjct: 477 -KNEVKITRI-RKVDSKK--DGILYQIVLDNTPFYPEGGGQVGDKGTLVSANET-----I 527
Query: 604 EIGELASLEGKIVHFG-----NVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
EI + I+HF N+ ++F + +V+ +R C H+ +HLL+ A
Sbjct: 528 EIIDTKKENNLILHFAKHLPENISATF--------QAKVNTELRSLCASNHSATHLLHQA 579
Query: 659 LRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ-VDRRHM 716
LR +L T QK V DFS + + ++ + + VE ++N I Q+ ++RR
Sbjct: 580 LRSILGTHVEQKGSLVAPKYLRFDFSHFSK-VTEEELRQVEDFVNARIQEQLPLIERRS- 637
Query: 717 RASELPFLTHL----TVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
+PF + + GE Y D V I + S E C G HV NT I +
Sbjct: 638 ----IPFAQAIEEGAMALFGEKYGDHVRAIKFGE-----SMELCGGIHVGNTADIWHFKI 688
Query: 773 IGYKSYNHGVRSIKCLTGDSSK 794
+ + G+R I+ +T ++ K
Sbjct: 689 VSEGAVAAGIRRIEAITNNAVK 710
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK FLG PR+A++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFNNSGMAQFKEFFLGNGTPKNPRIADTQKCLRVSGKHNDLEDVGFDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A EFLT+ + L DRLY +
Sbjct: 92 LGNWSFGDYFKKEALAWAWEFLTE-VLKLDKDRLYVS 127
>gi|237809468|ref|YP_002893908.1| alanyl-tRNA synthetase [Tolumonas auensis DSM 9187]
gi|237501729|gb|ACQ94322.1| alanyl-tRNA synthetase [Tolumonas auensis DSM 9187]
Length = 874
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 253/825 (30%), Positives = 390/825 (47%), Gaps = 131/825 (15%)
Query: 10 VRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPY 69
+++ + IR++FL+YF +QGH +V SS +VP+ D ++ F N+GM QFK+VFLG PY
Sbjct: 1 MQMTTSEIRTAFLEYF-RSQGHQVVDSSSLVPHNDPTLLFTNAGMNQFKDVFLGGDIRPY 59
Query: 70 PRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP 129
R +Q+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA R A +FLTK
Sbjct: 60 SRATTAQRCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWDFLTK-V 118
Query: 130 VSLPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWE 181
+ LP ++L T + D+E IW E+GV D I + G NFW+
Sbjct: 119 LQLPQEKLLVTVY--------ATDDEAYGIWANEIGVSADRIVRIGDNKGAPYASDNFWQ 170
Query: 182 MGSTGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIV 236
MG TGPCG +EI YD G P S D + IEIWN+VF+ R + T+
Sbjct: 171 MGDTGPCGPCTEIFYDHGADIWGGPPGSP----EEDGDRFIEIWNVVFMQFNRQADGTLE 226
Query: 237 PLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL 296
PL K +DTG+G ER+ I+Q S Y+ D+F L++ K+ G TDL
Sbjct: 227 PLPKPSVDTGMGIERVSAIMQGVHSNYEIDIFKTLIQNAAKIVGV------------TDL 274
Query: 297 DT-SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGK 347
+ S R+++D+ R + ++D + P + LR ++R A+ L + D F
Sbjct: 275 ENKSLRVIADHIRSCSFLISDGVMPSNEGRGYVLRRIIRRAVRHGRKLGATDTF------ 328
Query: 348 LVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELE 407
+L + ++G+ YPE+ K +P+V+ +LE
Sbjct: 329 -FYQLVGALVALMGEAYPEL--------------------------KSQQPVVERVLKLE 361
Query: 408 QFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTL 467
+ + L G+ L ++L R + EI G + F LYDTYG ++ ++ + T+
Sbjct: 362 EEQFVRT--LDRGLSLLEEELVRLGDVREIPGSVVFKLYDTYGFPADLTADVVRDRGYTI 419
Query: 468 CHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCL 527
AF+Q++ + +ER+K D HF V +K + ++ Y
Sbjct: 420 DEAAFQQEMEKQRERAK-------------DASHFAVDYNK-QLKIEQTSDFCGYERTIA 465
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+T + I + DQ+ L+ ++ + T YA +GGQ+ D
Sbjct: 466 NTTITAIYLADQLVST------------------LKDGDQALIVLENTPFYAESGGQMGD 507
Query: 588 IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCM 646
G+ + + + + + IVH G V SFK G T VD R
Sbjct: 508 AGLLRVGDAL-----FAVTDTHKIGQAIVHKGFVEQGSFKT--GDTVEAIVDNTRRNATA 560
Query: 647 RAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI 705
H+ +HLL+AALR L QK +V D DFS + E ++ ++ +E+ +N I
Sbjct: 561 LHHSATHLLHAALRNALGEHVAQKGSQVGPDRLRFDFSHF-EAINPAALRQIEQSVNAEI 619
Query: 706 ANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTG 765
V +D + M + + + GE Y D+V ++ + D S E C GTH +TG
Sbjct: 620 RKNVLIDTQLMSLDDAKTSGAMALF-GEKYGDEVRVVKMGD----FSTELCGGTHAKHTG 674
Query: 766 HIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN-GKHLSTAASF 809
I +I GVR I+ + G+++ A + G+ L AAS
Sbjct: 675 DIGFFKIISENGVAAGVRRIEAVAGEAALAHIHQLGEQLDEAASI 719
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLG PY R +Q+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGGDIRPYSRATTAQRCVRAGGKHNDLDNVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA R A +FLTK + LP ++L T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIRFAWDFLTK-VLQLPQEKLLVT 129
>gi|163754032|ref|ZP_02161155.1| hypothetical protein KAOT1_20457 [Kordia algicida OT-1]
gi|161326246|gb|EDP97572.1| hypothetical protein KAOT1_20457 [Kordia algicida OT-1]
Length = 870
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 246/799 (30%), Positives = 375/799 (46%), Gaps = 113/799 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR+ FL++F ++ H +V S+P+V D ++ FVNSGM FK FLG R
Sbjct: 1 MKSQDIRAKFLEFF-KSKTHQIVPSAPMVTKNDPTLMFVNSGMAPFKEYFLGNGTPKSNR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 IADTQKCLRVSGKHNDLEEVGYDTYHHTMFEMLGNWSFGDYFKKEAITWAWELLTEV-YG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ D LY T F GSD+ GL D+E D+W E+ VP + I NFWEMG GPCG
Sbjct: 119 IDKDILYVTVFEGSDEDGLKLDQEAYDLWKEI-VPEERILMGNKADNFWEMGEQGPCGPC 177
Query: 192 SEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E A VN D ++EIWN+VF+ + R + ++ L ++DTG+
Sbjct: 178 SEIHVDIRSEEEKAKIPGADLVNMDHPQVVEIWNLVFMQYNRKADKSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ+ S YDTD+F PL+ IE ++ K YG +D + R+++D+
Sbjct: 238 GFERLCMVLQDVKSNYDTDVFTPLIREIETITNVK-YG------TNEKVDVAIRVIADHV 290
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++ ++AD P + +R ++R A+ F K+ + L + +G +
Sbjct: 291 RAVSFSIADGQLPSNNTRGYVIRRILRRAVRYG-FTFLNKKEPFIYRLVDVLDNKMGKAF 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+++ IQ ++ EE + F LR L+Q GLVL
Sbjct: 350 PELKEQKQLIQNVIKEEEQSF--LRT---------------LDQ-------GLVL----- 380
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
++ + + +SG F L DTYG +++ + + + LT E F+ L +E +
Sbjct: 381 LDRVIENVNGKVVSGKKVFELKDTYGFPEDLTELILRERGLTYNEEEFDAALKIQQEGGR 440
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
A D + L + +G + +D
Sbjct: 441 KATAIQADD------------------------------WVVLLEDEEEEFVGYDLLEVD 470
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNT 596
R+ + + +Q + L+F+ T Y GGQ+ D G V Y+ +T
Sbjct: 471 VRLTRYRKIETKKEGVQYQ------LVFNMTPFYPEGGGQVGDKGYVETSNGDVIYVLDT 524
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+EN I+H + P R VD + R HT +HLL+
Sbjct: 525 KKEN------------NLIIHITKNLPKKLNEP---LRAVVDKKQRERTAANHTATHLLH 569
Query: 657 AALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
ALR +L T QK V S DFS + + L+V+ + VE ++N I ++ ++ +
Sbjct: 570 QALREILGTHVEQKGSAVHSKYLRFDFSHFSK-LTVEELRDVENFVNSRIEGKLPLEEKR 628
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
R E + GE Y D V I S E C GTHV NT I +
Sbjct: 629 NRPVEEALADGALALFGEKYGDTVRSIRFGK-----SIELCGGTHVQNTADIWHFKIKSE 683
Query: 776 KSYNHGVRSIKCLTGDSSK 794
+ G+R I+ +T D++K
Sbjct: 684 GAVAAGIRRIEAITYDATK 702
Score = 109 bits (272), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ FVNSGM FK FLG R+A++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFVNSGMAPFKEYFLGNGTPKSNRIADTQKCLRVSGKHNDLEEVGYDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ + D LY T
Sbjct: 92 LGNWSFGDYFKKEAITWAWELLTE-VYGIDKDILYVT 127
>gi|302037043|ref|YP_003797365.1| alanyl-tRNA synthetase [Candidatus Nitrospira defluvii]
gi|300605107|emb|CBK41440.1| Alanyl-tRNA synthetase [Candidatus Nitrospira defluvii]
Length = 876
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 255/789 (32%), Positives = 364/789 (46%), Gaps = 104/789 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
+R +F+ YF QGH V S+P++P D ++ F N+GM QFK VFLG Y R Q
Sbjct: 8 LRRAFIQYF-EQQGHRAVPSAPLIPQADPTLLFTNAGMNQFKRVFLGEETRAYNRAVTVQ 66
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KC+R GGKHNDL G HHTFFEMLGN+SF DY+K +A R EFLT V L DR
Sbjct: 67 KCLRAGGKHNDLENVGYTRRHHTFFEMLGNFSFGDYFKEEAIRFGWEFLTS-VVGLSKDR 125
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHY 196
++ T F D+E +W ++GV I + G K NFW+M TGPCG SE+H+
Sbjct: 126 MWITIF--------REDDEADRLWQKIGVSPSRIVRCGEKDNFWQMADTGPCGPCSELHF 177
Query: 197 DMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTIL 256
D +G A N + + +IEIWN+VF+ R SA T+ PL K IDTG+G ERL +
Sbjct: 178 D-QGPSVPGDATPNGEGDRVIEIWNLVFMQFNRDSAGTLNPLPKPSIDTGMGLERLTAVA 236
Query: 257 QNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALAD 316
Q + S YD+DLF PLL I +GA+ YG D S R+++D+ R IT +AD
Sbjct: 237 QGRLSNYDSDLFAPLLAAIGTRAGAQ-YGAV------EQADRSMRVIADHLRAITFLMAD 289
Query: 317 NMFPDATAKLRNVVRDALLISEDVFKVKQGKL-------VKELSYNIAEILGDVYPEIQD 369
+ P N R +L + G+L + EL+ + E +G+ Y E++
Sbjct: 290 GVLPS------NEGRGYVLRRILRRAARHGRLLGITEPFLHELTATVVEQMGEAYHELRP 343
Query: 370 SINKI-QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+ + + GEE R L + GL + LTK
Sbjct: 344 AAGTVAEATRGEEERFIATL-------------------------DQGLPILNDMLTKVR 378
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAA 488
A ++ +SG F LYDTYG ++I E + + L FE + E + R++
Sbjct: 379 ASGQNM--LSGTEIFKLYDTYGFPMDLIAEACREQDIRLDETGFEAAIEEQRTRARKTGG 436
Query: 489 --SNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
S L ++ T YD+ N G+V Q
Sbjct: 437 FESETARPALSEVAARVGTTAFVGYDH---------------LNSEGVV---QALLKGDR 478
Query: 547 AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIG 606
++ AR G I+ ++ D T YA GGQ D G+ T +G+VEI
Sbjct: 479 LVKEAREGDEIE-----------VVLDVTPFYAEGGGQAGDQGL-----LTGPDGRVEIR 522
Query: 607 ELAS-LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTC 665
E + IVH G VV+S + G ++ V+ R R R HT +HL++AALR +L
Sbjct: 523 ETTRPVPTLIVHKG-VVTSGSIREGERLQLSVNRRTRQDAARNHTATHLVHAALRDLLGP 581
Query: 666 -TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFL 724
Q V + DF+ + +L+ + +E +N+ + V M E
Sbjct: 582 HVKQYGSLVAPNRLRFDFAHF-RSLASRDIDEIESIVNEQVRQDQPVQTDVMGVQEAVAG 640
Query: 725 THLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRS 784
L G+ Y D V ++ I + S+E C GTH TG I ++ GVR
Sbjct: 641 GALAFF-GDKYGDQVRVVHI----DTFSKELCGGTHCRRTGEIGLFRIVSESGVAAGVRR 695
Query: 785 IKCLTGDSS 793
I+CLTG +
Sbjct: 696 IECLTGSGA 704
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK VFLG Y R QKC+R GGKHNDL G HHT
Sbjct: 30 IPQADPTLLFTNAGMNQFKRVFLGEETRAYNRAVTVQKCLRAGGKHNDLENVGYTRRHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K +A R EFLT V L DR++ T
Sbjct: 90 FFEMLGNFSFGDYFKEEAIRFGWEFLTS-VVGLSKDRMWITI 130
>gi|89890332|ref|ZP_01201842.1| alanyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
gi|89517247|gb|EAS19904.1| alanyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
Length = 873
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 252/798 (31%), Positives = 381/798 (47%), Gaps = 108/798 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR +FLD++ + Q H +V S+P+V D ++ FVN+GM FK FLG+ + Y R
Sbjct: 1 MKSQQIRQTFLDFYKSKQ-HEVVASAPMVIKNDPTLMFVNAGMNPFKEYFLGINDSKYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 IADSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIAWAWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ D LY T F G L D E D W EL + D I K NFWEMG GPCG
Sbjct: 119 IDKDCLYVTIFEGDTSENLERDTEAYDYWKEL-IAEDRILNGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMK-GEPSSAL---ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E +A+ + VNAD ++EIWN+VF+ +KR++ ++ L ++DTG+
Sbjct: 178 SEIHVDIRTAEEKAAVDGASLVNADHPQVVEIWNLVFMQYKRMADGSLKNLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL ++Q S YDTD+F PL+ IE ++G YG+T D + R+++D+
Sbjct: 238 GFERLAMVMQGVQSNYDTDVFTPLIREIETITG-HAYGKT------EQEDIAIRVIADHV 290
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R ++ ++AD P + + + + + K+ + L +++ +GD +P
Sbjct: 291 RAVSFSIADGQLPSNNGAGYVIRRILRRAIRYGFTYLNKKEPFIYMLVNTLSKQMGDAFP 350
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ N I ++ EE + F LR L+Q GLVL +T
Sbjct: 351 ELKSQKNLILNVIKEEEQSF--LRA---------------LDQ-------GLVLLDSMIT 386
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
A+ S I G+ AF LYDTYG ++ + K + L FE+ + K+RS
Sbjct: 387 A--AKSNSQNIIDGNKAFELYDTYGFPIDLTALILREKGMELDEAGFEKAMAAQKQRS-- 442
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
+AAS D +L+ +DD ++ IG D
Sbjct: 443 RAASETTTSDWTELR----SDDTQEF------------------------IGYDKLEADV 474
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
R+ + D + L+F+ T Y +GGQ D G Y+ +T
Sbjct: 475 RISRYRKVTTKKDGDLYQ------LVFNMTPFYGESGGQTGDKGYLESPSGDTIYIIDTK 528
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+ENG+ VH + K G + + VDA R HT +HLL+
Sbjct: 529 KENGQT------------VHLTKNLP--KDLEG-SHKAVVDANQRHRTSSNHTATHLLHQ 573
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR+VL QK V S DFS + + ++ + + VE ++N I Q+ ++
Sbjct: 574 ALRKVLGDHVEQKGSMVRSASLRFDFSHFAK-VTPEQLQEVENFVNARIREQLPLEENRT 632
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + GE Y D V I S E C GTHV NT + ++
Sbjct: 633 NTYDAAVEDGAMALFGEKYGDVVRTIKFGK-----SYELCGGTHVANTADVWHFKIMSEG 687
Query: 777 SYNHGVRSIKCLTGDSSK 794
+ G+R I+ ++ D+ K
Sbjct: 688 AVAAGIRRIEAISSDAVK 705
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 62/84 (73%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ FVN+GM FK FLG+ + Y R+A+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFVNAGMNPFKEYFLGINDSKYSRIADSQKCLRVSGKHNDLEEVGVDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTK 905
LGNWSF DY+K++A A E LT+
Sbjct: 92 LGNWSFGDYFKKEAIAWAWELLTE 115
>gi|110637850|ref|YP_678057.1| alanyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
gi|123058839|sp|Q11V49.1|SYA_CYTH3 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|110280531|gb|ABG58717.1| alanyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
Length = 877
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 258/811 (31%), Positives = 386/811 (47%), Gaps = 98/811 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR FLD+F ++GH +V S+PIV D ++ F N+GM QFK+ FLG Y R
Sbjct: 1 MTSAEIRQQFLDFFA-SKGHQIVPSAPIVNKNDPTLMFTNAGMNQFKDYFLGNETPKYRR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K +A + E LT
Sbjct: 60 IADTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKEEAIAWSWELLT-SVYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY T F G D+ L D E + W + + D I K NFWEMG GPCG
Sbjct: 119 LPKDRLYVTIFEGDDKEKLARDTEAYNFWKKW-IAEDRILLGNKKDNFWEMGEQGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + VN D ++EIWN VFI R + ++ L ++DTG+
Sbjct: 178 SEIHVDLRTDEEVKAVDGKTLVNNDHPQVVEIWNNVFIQFNRKADGSLEELPDKHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +Q K S YDTD+F P+++ + K +G K YG T D + R+++D+
Sbjct: 238 GFERLCMAIQKKKSNYDTDVFTPMIDFVAKAAGIK-YGADEKT------DIAMRVMADHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I+ +AD P A +R ++R A+ + +K+ L K L +A+ L V+
Sbjct: 291 RAISFVIADGQLPSNNKAGYVIRRILRRAVRYAYTFLNLKEPFLYK-LVAVLADQLAHVF 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ + + ++ EE F LR + K LEQ I EE
Sbjct: 350 PELKSQQDFVAKVVQEEEISF--LRTLDIGLSK--------LEQ--IREE---------- 387
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ T I G AF LYDT+G ++IQ +A LT+ F+ ++ K+RSK
Sbjct: 388 ----LKAKKATTIDGKTAFELYDTFGFPLDLIQLIARENGLTVDEAGFDTEMAAQKQRSK 443
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
A+ D + VT+D YD
Sbjct: 444 KAASVETSDWTI-------VTEDDEVEFVGYD---------------------------- 468
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
H I +R ++ + L+ D T YA +GGQ D G Q + K++
Sbjct: 469 -HLISTSRI-IKYRQVKTKGKDQYQLVLDTTPFYAESGGQAGDTGT-----LVQGDKKIK 521
Query: 605 IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL- 663
+ I+H + + P +V+ R H+ +HLL+AAL++VL
Sbjct: 522 VLNTVKENNLIIHITEQLPADLKAP---VDCKVNVLQRSLTENNHSATHLLHAALKQVLG 578
Query: 664 TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRHMRASELP 722
+ QK V DFS + + ++ + + VE +N+ I + + +RR++ E
Sbjct: 579 SHVNQKGSLVNESVLRFDFSHFSK-VTEEELKKVELIVNEKIRENISLNERRNVPIEEAK 637
Query: 723 FLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGV 782
L + + GE Y + V +I D SRE C GTHV +TG I + S GV
Sbjct: 638 KLGAMALF-GEKYGEYVRMITFDDS---FSRELCGGTHVSSTGKIGFFKITSESSVAAGV 693
Query: 783 RSIKCLTGDSSKAAVENGKHLSTAASFSQIL 813
R I+ LT +++ V+ + +T A ++++
Sbjct: 694 RRIEALTATAAEVFVD--EQQTTLAKITELM 722
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ FLG Y R+A++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDYFLGNETPKYRRIADTQKCLRVSGKHNDLEEVGIDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
LGNWSF DY+K +A + E LT LP DRLY T
Sbjct: 92 LGNWSFGDYFKEEAIAWSWELLT-SVYKLPKDRLYVTI 128
>gi|426382771|ref|XP_004057974.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Gorilla gorilla
gorilla]
Length = 902
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 175/382 (45%), Positives = 236/382 (61%), Gaps = 12/382 (3%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + HT V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTASEIRQRFIDFFKRNE-HTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 AKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG + GL D E + IW LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI + R + + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+PY + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R ITVALAD PD T + LR ++R A+ + + +G L + + LGD
Sbjct: 302 ARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRG-FFATLVDVVVQSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIF 385
+PE++ + ++ I+ EE F
Sbjct: 361 FPELKKDPDMVKDIINEEEVQF 382
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 74/109 (67%), Gaps = 6/109 (5%)
Query: 816 GNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAG 870
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G
Sbjct: 30 ATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVG 89
Query: 871 RDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+D YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 90 KDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQ-EFGIPIERLYVTY 137
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 16/253 (6%)
Query: 569 GLIFDKTNLYATAGGQIDDIG-VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKV 627
G++ DKT YA GGQI D G + + +++++ + + G ++H G + KV
Sbjct: 460 GVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKTEFTVKNAQVRAGYVLHIGTIYGDLKV 519
Query: 628 TPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGE 687
G + +D R M HT +H+LN ALR VL QK V D DF+ G
Sbjct: 520 --GDQVWLFIDEPRRRPIMSNHTATHILNFALRSVLGEADQKGSLVAPDRLRFDFTAKG- 576
Query: 688 TLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--- 744
+S + E+ N++I V + + + L + E YPD V ++ I
Sbjct: 577 AMSTQQIKKAEEIANEMIEAAKAVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVP 636
Query: 745 ---------SDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKA 795
++ S E C GTH+ N+ H + ++ ++ G+R I +TG ++
Sbjct: 637 VSELLDDPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQK 696
Query: 796 AVENGKHLSTAAS 808
A+ + L S
Sbjct: 697 ALRKAESLKKCLS 709
>gi|323455368|gb|EGB11236.1| hypothetical protein AURANDRAFT_52432 [Aureococcus anophagefferens]
Length = 1017
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 256/825 (31%), Positives = 370/825 (44%), Gaps = 106/825 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R +F+DYF +GHT V SS +VP D ++ F N+GM QFK +FLG A R
Sbjct: 43 VRDTFVDYFAEKRGHTRVPSSGVVPLQDPTLLFANAGMNQFKPIFLGQAAPGTQLATLER 102
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
NSQKC+R GGKHNDL G D+YHHTFFEMLG+WSF DY+K +A A E L
Sbjct: 103 ACNSQKCIRAGGKHNDLEDVGLDTYHHTFFEMLGSWSFGDYFKAEATAWAKELLVDV-YG 161
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +DR+Y TYF GS + GL D E RD+WL G + + NFWEMG +GPCG
Sbjct: 162 LDMDRMYATYFEGSPEEGLEPDYEARDLWLAAGFKPEQVIPGSKADNFWEMGDSGPCGPC 221
Query: 192 SEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKR-VSADTIVPLSKNYIDTGLGFE 250
+E+HYD G VN D +IEIWN+VFI +R + L ++DTGLG E
Sbjct: 222 TELHYDALGGRGDVAHLVNMDDPTVIEIWNLVFIQFERDGKTKRLSSLPAQHVDTGLGLE 281
Query: 251 RLVTILQNKTSTYDTDLFLPLLETI--EKVSGAKPYGRTFTTSNRTD--LDTSYRMLSDY 306
RLV IL S YDTD F L E G+ PYG ++ DT+YR ++D+
Sbjct: 282 RLVAILNQVPSNYDTDAFSGLFAATLAELPEGSAPYGGLLGDDDKAQNYRDTAYRAIADH 341
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R ++ A+AD P + LR ++R A+ + G + + A GD
Sbjct: 342 VRCLSFAIADGARPSNEGRGYVLRRILRRAVRYGLSTLGAEPGFMARLAPALAASHFGDY 401
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
YPE++D + I +L EE F KT LE+ GVKY
Sbjct: 402 YPELRDELPTIVEVLAEEEATF--------------AKT---LER-----------GVKY 433
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L ++L + + + GD AF LYD+ G ++ ++A + + FE + +RS
Sbjct: 434 LDEELDKLEATDVLGGDAAFFLYDSLGFPVDLTAQMAEERGFLVDEPGFEAAMRAQVDRS 493
Query: 484 K------AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
K A+AA ++L + D D VG +
Sbjct: 494 KADRKARAEAALGTVRLELGVAATAALGD---------------AGVAPTDALAVGATVA 538
Query: 538 DQVFCIDKHAIR-----HARSG--ASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
D ++ + A +G A +D+ A VG++ D T YA AGGQ D G
Sbjct: 539 DDATEVNGATVVALVAIDAATGDPALVDAATCGPGAAVGVVLDATPFYAEAGGQASDRGS 598
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
L + V++ ++ + G +VH + + G + VD R R H
Sbjct: 599 LVLGGAS-----VDVIDVQAYAGYVVHTVASGADVALAVGDAADGVVDGDAR----RKHA 649
Query: 651 TSHLLNAALRRVLTCTY-----QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DV 704
+H++ A+ L Q+ + DFS +G+ L +AAVE +N +
Sbjct: 650 VNHMMTHAVNHALWAELGDGVGQRGSDANDERLRFDFS-HGKALKAAQLAAVEAAVNTEY 708
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPD--------------------DVILIDI 744
+A+ V+R + + + L + GE YPD DV+
Sbjct: 709 VADGATVERAKVGLEDAKNIRALRAVFGEAYPDPVNVVAMFPKAAFAGAPTIADVLASPD 768
Query: 745 SDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLT 789
+K + S E C G H+ + E + + GVR I+ LT
Sbjct: 769 DEKWDKASIELCGGNHLGDAAAAEYFVITQETAVAKGVRRIEALT 813
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
Query: 810 SQILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHN 864
+++ + G +P D ++ F N+GM QFK +FLG A R NSQKCIR GGKHN
Sbjct: 58 TRVPSSGVVPLQDPTLLFANAGMNQFKPIFLGQAAPGTQLATLERACNSQKCIRAGGKHN 117
Query: 865 DLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
DL G D+YHHTFFEMLG+WSF DY+K +A A E L L +DR+Y T+
Sbjct: 118 DLEDVGLDTYHHTFFEMLGSWSFGDYFKAEATAWAKELLVD-VYGLDMDRMYATY 171
>gi|403221365|dbj|BAM39498.1| alanyl-tRNA synthetase [Theileria orientalis strain Shintoku]
Length = 973
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 254/827 (30%), Positives = 396/827 (47%), Gaps = 115/827 (13%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP---- 66
R SK +R F+DYF ++ HT S+ ++P D ++ FVN+GM QFK++ +G +
Sbjct: 18 RSNSKWVRKQFVDYFV-SKNHTYWPSASVLPNNDPTLLFVNAGMNQFKDIIMGKSDENTE 76
Query: 67 -APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
NSQKC+R GGKHNDL G D YH+T+FEMLGNWSF DY+K A A E L
Sbjct: 77 FGKLRTACNSQKCIRAGGKHNDLEDVGHDCYHNTYFEMLGNWSFGDYFKEKAISYAWELL 136
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
T+ L +RLY TYFGG+D P D E+RD+W + +P I G K NFWEM T
Sbjct: 137 TE-VYKLDPERLYVTYFGGNDN--CPADLESRDLWTKY-LPSSKILPFGQKENFWEMADT 192
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG +EIHYD G A + VN D ++E+WN+VF+ + R + L K +DT
Sbjct: 193 GPCGPCTEIHYDHVGN-RDASSLVNMDDPKVVELWNLVFMQYNRNKDGKLEKLPKPCVDT 251
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ERL IL+ S YD+DL L+ I ++ P +T + T LD +YR++SD
Sbjct: 252 GMGLERLCAILRGSNSNYDSDLLHDLILYINQLL---PKLEAYTGGS-TPLDVAYRVVSD 307
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R +++A+AD ++P + LR ++R A+ D + L K L ++ LGD
Sbjct: 308 HIRCLSIAIADRVYPSNEGRGYVLRRILRRAVRYCRDYLGTTEPFLHK-LVPCVSSQLGD 366
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
Y +++ I+ ++ +E ++F LV +E+F M E K
Sbjct: 367 AYQNLKEYEEDIKSVILDEEKLF-------------LVTLGKGVEKFKKMAE-------K 406
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
KQL +G AF LY +YG ++ ++ L++ E + Q+L +E+
Sbjct: 407 CTNKQL---------TGTDAFLLYQSYGFPLDLTVLMSKELGLSVDVEGYNQELKLHQEK 457
Query: 483 SKAKAASNVPDID------LMDLKHFPV-----------TDDKYKYDY-HYDTNSKRYTF 524
S+ + + ++ L L + TDD KYD+ + K+Y
Sbjct: 458 SEGRVVRDDGSLESKCDNLLKSLSADKIDAALTSSGNKYTDDALKYDWDSLNPVDKKY-- 515
Query: 525 PCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQ 584
+ LV I+ + V+ D + GL+FD+T YA GGQ
Sbjct: 516 ---EAKLVSILTEEGVY----------------DRLDYAPGDVFGLVFDRTPFYAEGGGQ 556
Query: 585 IDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLG 644
+ D G +++ + + G ++HF + G + VD + R+
Sbjct: 557 VYDTGHV---------DDLKVLRVYKMSGLVIHFCTSEENGSAEVGGVKHLSVDYKRRVK 607
Query: 645 CMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIND 703
HT +H+LN LR VL TYQ+ ++ ++ D+S Y L + + +E+ + D
Sbjct: 608 AACNHTATHILNFVLREVLDQSTYQRGSQLDDEKLKFDYS-YNGALPEELIVKIEERMKD 666
Query: 704 VIANQVQVDRRHMRASELPFLTHLTVIPG------EIYPDDVILIDISDKE-----NVIS 752
+ + V R E+ + L IPG E YP+ V ++++ + S
Sbjct: 667 FVRAEATV-----RTKEIEYKQALE-IPGIRANFDEKYPEVVRVVNVDMGHTDFNGELTS 720
Query: 753 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN 799
E C GTH+ NT IE VIG + + GVR + +T + + E+
Sbjct: 721 TEVCGGTHLSNTKTIEDVAVIGEEGISKGVRRLTMITNEQCHKSKED 767
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ FVN+GM QFK++ +G + NSQKCIR GGKHNDL G D
Sbjct: 46 LPNNDPTLLFVNAGMNQFKDIIMGKSDENTEFGKLRTACNSQKCIRAGGKHNDLEDVGHD 105
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YH+T+FEMLGNWSF DY+K A A E LT+ L +RLY T+
Sbjct: 106 CYHNTYFEMLGNWSFGDYFKEKAISYAWELLTE-VYKLDPERLYVTY 151
>gi|410584332|ref|ZP_11321435.1| alanyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
gi|410504267|gb|EKP93778.1| alanyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
Length = 905
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 256/794 (32%), Positives = 382/794 (48%), Gaps = 99/794 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F GHT+V SS +VP D ++ F N+GM QFK+VF G PY R
Sbjct: 16 MPAAEIRERFLRFF-ERHGHTIVPSSSLVPKDDPTLLFTNAGMVQFKDVFTGKEKVPYKR 74
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+QKC+R GGKHNDL G+ + HHTFFEMLGN+SF DY+KR+A A FLT+ +
Sbjct: 75 ATTAQKCMRAGGKHNDLENVGKTARHHTFFEMLGNFSFGDYFKREAIHFAWTFLTE-ELG 133
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RL+ T F D+E +W E+ G+P + I + G K NFW MG TGPCG
Sbjct: 134 LPRERLWATIF--------RDDDEAFGLWQEVTGIPAERIVRLGEKDNFWAMGDTGPCGP 185
Query: 191 SSEIHYDMKGEPSSALARV----NADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEI YD +GE A V D + +EIWN+VF+ R + + PL + IDTG
Sbjct: 186 CSEIVYD-RGEEFRCDAEVCGIGACDCDRWLEIWNLVFMQFNRDESGRLEPLPRPSIDTG 244
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ER+ +++Q S +DTDLF PLL +E ++G +PY + + +R+++D+
Sbjct: 245 MGLERIASVMQGVGSNFDTDLFRPLLRAVEDLTG-RPY-------DGGEAGFPFRVIADH 296
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R T +AD + P + LR ++R A+ + +++ L + L + E++GD
Sbjct: 297 ARACTFLIADGVLPSNEGRGHVLRRILRRAVRFGR-ILGLEEPFLYR-LVDTVGEVMGDA 354
Query: 364 YPEIQDSINKI-QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE++ + + ++I GEE R F L + G+ + +
Sbjct: 355 YPEVRQRADYVRRVIRGEEERFFRTL-------------------------DQGMAILAE 389
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+ + R + I G+ AF LYDTYG ++ ++ A L + E FE+ + +R
Sbjct: 390 VIERARQRGDGL--IHGEEAFVLYDTYGFPLDLTEDAAEEAGLRVDREGFERAMA--VQR 445
Query: 483 SKAKAASNVPD-IDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
+A+AA V + D + D+ Y+ T L
Sbjct: 446 QRARAAREVEEGWDPGSPLARALADEPATEFTGYERLEDEGTVRLL-------------- 491
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
+R D+ VG+I D+T YA GGQ+ D G +L
Sbjct: 492 ------VRRDEPADRADA-----GEEVGVILDRTPFYAERGGQVGDTG--WLETP---RA 535
Query: 602 KVEIGELASLE-GKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
++E+ + L G+I+H VV V G R VDA R MR HT +HLL+AAL+
Sbjct: 536 RLEVLDTQPLPGGRILHKARVVEG-AVQVGDRVRARVDAARRAAIMRNHTATHLLHAALK 594
Query: 661 RVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
RVL Q V D DF+ + E + + A+E IN I + V R + +
Sbjct: 595 RVLGDHVNQAGSLVAPDRLRFDFTHF-EAPTAGQLRAIEDEINQQILRGIPV-RWYWTSL 652
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
E + GE Y ++V ++ I D S E C GTHV +T I S
Sbjct: 653 EEALEAGALALFGEKYGNEVRVVQIGD----YSLELCGGTHVVSTSDIGLFKFTAEGSVA 708
Query: 780 HGVRSIKCLTGDSS 793
GVR ++ +TG S
Sbjct: 709 AGVRRVEAVTGWGS 722
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VF G PY R +QKC+R GGKHNDL G+ + HHT
Sbjct: 43 VPKDDPTLLFTNAGMVQFKDVFTGKEKVPYKRATTAQKCMRAGGKHNDLENVGKTARHHT 102
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+KR+A A FLT+ + LP +RL+ T
Sbjct: 103 FFEMLGNFSFGDYFKREAIHFAWTFLTE-ELGLPRERLWATI 143
>gi|149369737|ref|ZP_01889589.1| alanyl-tRNA synthetase [unidentified eubacterium SCB49]
gi|149357164|gb|EDM45719.1| alanyl-tRNA synthetase [unidentified eubacterium SCB49]
Length = 872
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 255/800 (31%), Positives = 377/800 (47%), Gaps = 113/800 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR++FL++F ++ H++V S+P+V D ++ FVNSGM FK FLG R
Sbjct: 1 MKANEIRAAFLEFF-ESKKHSIVPSAPMVLKDDPTLMFVNSGMAPFKEFFLGNAQPKNTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ +SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K +A A E LT+ +
Sbjct: 60 LTDSQKCLRVSGKHNDLEEVGYDTYHHTLFEMLGNWSFGDYFKEEAIAWAWELLTE-VLK 118
Query: 132 LPLDRLYFTYFGGSDQY-GLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+ D LY T F GSD L D E DIW + + D I K K NFWEMG GPCG
Sbjct: 119 IDKDMLYVTVFEGSDDADNLKMDTEAYDIWKKY-IAEDRILKGNKKDNFWEMGDQGPCGP 177
Query: 191 SSEIHYDMKGEPSSAL----ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH D++ A + VN D ++EIWN+VF+ + R + T+ L +IDTG
Sbjct: 178 CSEIHVDIRSAEEKAAVDGKSLVNMDHPQVVEIWNLVFMQYNRKANGTLEILPNKHIDTG 237
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERL +LQ+ S YDTD+F P++ IE ++ + YG+ +D + R++SD+
Sbjct: 238 MGFERLCMVLQDVKSNYDTDVFTPIIREIETITDTE-YGKD------EKIDIAIRVISDH 290
Query: 307 SRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R + ++AD P A +R ++R A+ F K+ + L + +G+
Sbjct: 291 VRAVAFSIADGQLPSNNGAGYVIRRILRRAVRYG-FTFLDKKEPFIYRLVTVLVSKMGEA 349
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PEI+ I+ ++ EE F LR L+Q GLVL
Sbjct: 350 FPEIKSQKQLIENVIKEEESSF--LRT---------------LDQ-------GLVL---- 381
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + + TEISG F L DTYG +++ + K T E FEQKL E K R
Sbjct: 382 LDRMIEGQKGSTEISGAKVFELKDTYGFPEDLTDLILREKGYTYSKEEFEQKLAEQKARG 441
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
K + S D ++ DD + YD L N+
Sbjct: 442 KEASESKNDDWTIL-------LDDAEEEFVGYDR---------LSANV------------ 473
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTN 595
R+ + + D + L+F+ T Y GGQ+ D G V Y+ +
Sbjct: 474 --KLTRYRKVTSKKDGEMYQ------LVFNLTPFYPEGGGQVGDKGYVQAPGGDVLYILD 525
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T +EN I+HF + + +T ++V+ + R R+ C H+ +HLL
Sbjct: 526 TKKEN------------NVIIHFTKNLPN-NLTETFKAQVDENHRFRIEC--NHSATHLL 570
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
+ LR +L T QK V S DFS + + ++ + + VE ++N IA ++ + +
Sbjct: 571 HQGLREILGTHVEQKGSSVHSKYLRFDFSHFSK-VTAEELQEVEDFVNARIAGRLDFEEK 629
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
E + GE Y D V + S E C GTHV NT I +
Sbjct: 630 RAVPMEEAIAEGAMALFGEKYGDAVRTVRFGQ-----SIELCGGTHVKNTADIWHFKIKS 684
Query: 775 YKSYNHGVRSIKCLTGDSSK 794
+ GVR I+ +T + K
Sbjct: 685 ESAVASGVRRIEAITNHALK 704
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ FVNSGM FK FLG R+ +SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFVNSGMAPFKEFFLGNAQPKNTRLTDSQKCLRVSGKHNDLEEVGYDTYHHTLFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K +A A E LT+ + + D LY T
Sbjct: 92 LGNWSFGDYFKEEAIAWAWELLTE-VLKIDKDMLYVT 127
>gi|340353144|ref|ZP_08675972.1| alanine--tRNA ligase [Prevotella pallens ATCC 700821]
gi|339611340|gb|EGQ16170.1| alanine--tRNA ligase [Prevotella pallens ATCC 700821]
Length = 889
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 260/803 (32%), Positives = 378/803 (47%), Gaps = 116/803 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR S+ +F ++GH +V S+P+V D ++ F N+GM Q+K++ LG T P PR
Sbjct: 4 MTANEIRDSYKKFF-ESKGHVIVPSAPMVIKDDPTLMFTNAGMNQWKDIILG-TKDPEPR 61
Query: 72 V-ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K A A E+L
Sbjct: 62 RRTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEKAIDYAWEYLVDVLK 121
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
P D LY T F GS + G+P DEE W + +P DHI NFWEMG TGPCG
Sbjct: 122 LNPAD-LYVTVFEGSPEDGIPRDEEAAKYWAK-HLPTDHIIDGNKHDNFWEMGETGPCGP 179
Query: 191 SSEIHYDMKGEPSSAL----ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH D + A VN D +IEIWNIVF+ +R S ++ PLS + IDTG
Sbjct: 180 CSEIHVDSRSNEEKAQIPGRELVNKDNPQVIEIWNIVFMQFQRKSDGSLSPLSMHVIDTG 239
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTF-------TTSNRTDLDTS 299
+GFERLV +LQ K S YDTD+F P ++ IE++SG K YG T T+ + +D +
Sbjct: 240 MGFERLVRMLQGKNSNYDTDIFQPTIKEIERLSGKK-YGFTTPSGENGEATTEQEKIDIA 298
Query: 300 YRMLSDYSRMITVALADNMFP---DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNI 356
R+++D+ R + ++AD+ P A +R ++R A+ + K+ + K L+ I
Sbjct: 299 MRVIADHMRAVAFSIADSQLPGNAKAGYVIRRILRRAVRYAYTFLDQKEAFIYKLLNTFI 358
Query: 357 AEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
E +G YPE+ I ++ EE F LR
Sbjct: 359 HE-MGGAYPELTAQRELIARVMKEEEDSF--LRT-------------------------- 389
Query: 417 LVLGVKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
L G+ LT ++ + TE+SG AF L+DTYG ++ + + ++ + FE+
Sbjct: 390 LEKGINLLTTEMDELKAQGKTELSGKEAFRLFDTYGFPLDLTELICREHGFSVDEKQFEE 449
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
++ + K R++ AA V + D + L+ + YDY + C
Sbjct: 450 EMAQQKARARNAAA--VENSDWVVLREG--EQEFVGYDY--------TEYEC-------- 489
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
H +R+ + + + N + L+ D T Y GGQ+ D GV
Sbjct: 490 -----------HILRYRK-------VTQKKNTFFELVLDHTPFYGEMGGQVGDQGVLVTE 531
Query: 595 NTTQENGKVEIGELASLEGKIVHF-----GNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ T ++I + + +H NV + F VD R H
Sbjct: 532 DET-----IDIVDTKRENNQSIHIVKQLPKNVEADFMAC--------VDTDKRDASAANH 578
Query: 650 TTSHLLNAALRRVLT--CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
T +HLL+ AL++VL C QK V D DFS + + ++ D + VE+ +ND+I
Sbjct: 579 TATHLLDYALKQVLGEHCE-QKGSYVSPDTLRFDFSHF-QKVTDDELRQVERLVNDMIRQ 636
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHI 767
E + GE Y D V +I S E C G H +TG I
Sbjct: 637 DFPCGEYRDTPLEEAKEMGAVALFGEKYGDKVRVIKFGP-----SCEFCGGIHATSTGRI 691
Query: 768 ESCTVIGYKSYNHGVRSIKCLTG 790
+I S GVR I+ LTG
Sbjct: 692 GFFKIISESSVAAGVRRIEALTG 714
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 63/98 (64%), Gaps = 3/98 (3%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRV-ANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
D ++ F N+GM Q+K++ LG T P PR +SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 35 DPTLMFTNAGMNQWKDIILG-TKDPEPRRRTDSQKCLRVSGKHNDLEEVGHDTYHHTMFE 93
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K A A E+L P D LY T
Sbjct: 94 MLGNWSFGDYFKEKAIDYAWEYLVDVLKLNPAD-LYVT 130
>gi|374300416|ref|YP_005052055.1| alanyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
gi|332553352|gb|EGJ50396.1| alanyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
Length = 879
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 252/792 (31%), Positives = 374/792 (47%), Gaps = 104/792 (13%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
+ IR FLDY+ QGH +V SS +VP D S+ F N+GM QFK VFLG PY R
Sbjct: 3 ASEIRQKFLDYY-KRQGHEIVSSSGLVPKDDPSLLFTNAGMVQFKKVFLGQERRPYNRAT 61
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
+QKC+RVGGKHNDL GR + HHTFFEMLGN+SF DY+K DA R A EFLT+ + LP
Sbjct: 62 TAQKCLRVGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKADAIRFAWEFLTE-ELKLP 120
Query: 134 LDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSS 192
+RLY T F D+E ++W ++ GVP++ I + G K NFW MG TGPCG S
Sbjct: 121 KERLYVTVF--------RDDDEAEELWQKVAGVPKERIYRLGEKDNFWSMGDTGPCGPCS 172
Query: 193 EIHYDMKGEPSSAL----ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
EI D S L + + DR +EIWN+VF+ + + T VPL + IDTG+G
Sbjct: 173 EILIDQGQHMSCGLQCGIGKCDCDR--FLEIWNLVFMQYDQTENGTRVPLPRPSIDTGMG 230
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
ER+ ++Q S +DTDLF L+ ++G T+ ++ T DT+ R+++D+SR
Sbjct: 231 LERISAVVQGVFSNFDTDLFQQLIGHTANMAGV-----TYKANDET--DTALRVIADHSR 283
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
+ D + P + LR ++R A + + + + + E +GD YP
Sbjct: 284 SAAFMITDGILPSNEGRGYVLRRLIRRAFRFGRLIG--LRDPFLHSVCAKVVEAMGDAYP 341
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E+ D+ + + ++ EE F L G+ L
Sbjct: 342 ELHDNSSFMVRVVREEEERFGQT----------------------------LDKGLDILE 373
Query: 426 KQLAR--DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
++LAR + ISG+ AF LYDT+G +I+ ++A + ++ ++ + E K R+
Sbjct: 374 EELARLQEAGAKAISGEFAFKLYDTFGFPLDIVNDIAEKRGFSVDEPGYKACMTEQKVRA 433
Query: 484 KAKAASNVPDIDLM----DLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
K KA + D+ DL +T + Y D ++ LD
Sbjct: 434 K-KAWKGSGETDIASRFHDLLAAGLTSEFVGYQ---DLEAESRVVTILDEQ--------- 480
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
K A R + H WV +F T Y +GGQ D G T +T
Sbjct: 481 ----GKPATRLTQG----------HGGWV--VFAATPFYGESGGQAGDRG----TVSTMT 520
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
+ L + VH V+ ++ + + VD +R R HTT+HLL AAL
Sbjct: 521 GDADVLDSLKPSQNLTVH-KVFVNEGELLMAQDAMLRVDVELRAATARNHTTTHLLQAAL 579
Query: 660 RRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R+VL Q V D DF+ + L+ + + AVE +N I + V R ++ +
Sbjct: 580 RKVLGDHVKQSGSLVGPDRLRFDFT-HISALTPEELRAVEDEVNRAIVASLPVSREYL-S 637
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ T + GE Y + V +I++ +S E C GTH+ +TG ++
Sbjct: 638 QQQALAKGATALFGEKYGETVCVIEVPG----VSMELCGGTHLASTGQAGLFVILSESGV 693
Query: 779 NHGVRSIKCLTG 790
GVR I+ TG
Sbjct: 694 AAGVRRIEAATG 705
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
Query: 816 GNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYH 875
G +P D S+ F N+GM QFK VFLG PY R +QKC+RVGGKHNDL GR + H
Sbjct: 26 GLVPKDDPSLLFTNAGMVQFKKVFLGQERRPYNRATTAQKCLRVGGKHNDLENVGRTARH 85
Query: 876 HTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
HTFFEMLGN+SF DY+K DA R A EFLT+ + LP +RLY T
Sbjct: 86 HTFFEMLGNFSFGDYFKADAIRFAWEFLTE-ELKLPKERLYVT 127
>gi|416155788|ref|ZP_11604081.1| alanyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
gi|326576631|gb|EGE26538.1| alanyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
Length = 893
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 256/831 (30%), Positives = 401/831 (48%), Gaps = 136/831 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S +R +F+D+F + Q HT V SS ++P+ D ++ F N+GM QFK+ FLGL Y R
Sbjct: 4 MQSNEVRQAFIDFFVSKQ-HTHVPSSSLIPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
+SQKCVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA A EFLT +
Sbjct: 63 AVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWL 122
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEM 182
+LP DRLY T + D+E DIW ++G+P++ I G NFW M
Sbjct: 123 ALPKDRLYVTVY--------HTDDEAFDIWHKDIGLPQERIIAIGDNKGGAYQSDNFWMM 174
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARV-NADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
G TGPCG +EI YD L + D + IEIWN VF+ R T+ PL K
Sbjct: 175 GDTGPCGPCTEIFYDHGEHIWGGLPGTPDEDGDRYIEIWNCVFMQFNRQKDGTMQPLPKP 234
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
+DTG+G ER+ I+Q Y+TD+F L+ + G T + S +
Sbjct: 235 SVDTGMGLERISAIMQGVHGNYETDIFTKLMTKAVNIIG-------LPTDTDIQNEPSLK 287
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLVKELS 353
+L+D+ R + +AD + P + LR ++R A+ L + D F +L
Sbjct: 288 VLADHIRSVAFLIADGVIPSNEGRGYVLRRIIRRAVRHGNKLGATDAF-------FYQLV 340
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+ +A+I+GD YP+++ +KI+ +A +KE + KT
Sbjct: 341 HPLADIMGDAYPQLRHEQHKIE--------------QAILKEEEQFAKT----------- 375
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
L G+K L+++L ++G+ F LYDTYG ++ ++ K +T+ FE
Sbjct: 376 ---LSQGLKLLSQELDSLQQGDALAGETVFKLYDTYGFPADLTADIVREKGITIDEAGFE 432
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCLDT 529
+ E +R++A+ A K+ DYH D+ ++ + LD
Sbjct: 433 LSMAE--QRTRAREAG------------------KFAMDYHALIQVDSATEFLGYERLDN 472
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
D I + G ++D++ E + V LI DKT YA +GGQ+ ++G
Sbjct: 473 --------------DSTVIHLYQDGKAVDTLA-EGDEGV-LILDKTPFYAESGGQVGELG 516
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ E+G ++ + I+H G VV + ++ +V +++R + H
Sbjct: 517 -----EISTESGVFDVLDTQKSGQAIIHHG-VVKMGHINNNQSATAQVASQVRASSAKNH 570
Query: 650 TTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIAN 707
+ +HLL+AALR +L QK V SD DFS Y + L+ +++ +E +N ++AN
Sbjct: 571 SATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFS-YDKPLTEQNISQIETMVNQQILAN 629
Query: 708 Q------VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--SDKENV-ISREPCCG 758
+ +D + + + F GE Y D V ++ + +DK+ S E C G
Sbjct: 630 TPAHVEILDIDSAKNKGAMMLF--------GEKYGDTVRVLSMGTTDKDGKPFSIELCGG 681
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENG-KHLSTAAS 808
HV TG I +I + + GVR I+ +TG + V+ G K L+ A+
Sbjct: 682 LHVTRTGDIGLFKIISEQGISAGVRRIEAVTGMGAVNYVQQGDKQLNQLAN 732
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP+ D ++ F N+GM QFK+ FLGL Y R +SQKC+R GGKHNDL G + HHT
Sbjct: 31 IPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVRAVSSQKCVRAGGKHNDLDNVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K+DA A EFLT ++LP DRLY T
Sbjct: 91 FFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWLALPKDRLYVT 132
>gi|416230160|ref|ZP_11628249.1| alanyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
gi|326561486|gb|EGE11830.1| alanyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
Length = 893
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 256/831 (30%), Positives = 401/831 (48%), Gaps = 136/831 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S +R +F+D+F + Q HT V SS ++P+ D ++ F N+GM QFK+ FLGL Y R
Sbjct: 4 MQSNEVRQAFIDFFVSKQ-HTHVPSSSLIPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
+SQKCVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA A EFLT +
Sbjct: 63 AVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWL 122
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEM 182
+LP DRLY T + D+E DIW ++G+P++ I G NFW M
Sbjct: 123 ALPKDRLYVTVY--------HTDDEAFDIWHKDIGLPQERIIAIGDNKGGAYQSDNFWMM 174
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARV-NADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
G TGPCG +EI YD L + D + IEIWN VF+ R T+ PL K
Sbjct: 175 GDTGPCGPCTEIFYDHGEHIWGGLPGTPDEDGDRYIEIWNCVFMQFNRQKDGTMQPLPKP 234
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
+DTG+G ER+ I+Q Y+TD+F L+ + G T + S +
Sbjct: 235 SVDTGMGLERISAIMQGVHGNYETDIFTKLMTKAVNIIG-------LPTDTDIQNEPSLK 287
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLVKELS 353
+L+D+ R + +AD + P + LR ++R A+ L + D F +L
Sbjct: 288 VLADHIRSVAFLIADGVIPSNEGRGYVLRRIIRRAVRHGNKLGATDAF-------FYQLV 340
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+ +A+I+GD YP+++ +KI+ +A +KE + KT
Sbjct: 341 HPLADIMGDAYPQLRHEQHKIE--------------QAILKEEEQFAKT----------- 375
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
L G+K L+++L ++G+ F LYDTYG ++ ++ K +T+ FE
Sbjct: 376 ---LSQGLKLLSQELDSLQQGDALAGETVFKLYDTYGFPADLTADIVREKGITIDEAGFE 432
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCLDT 529
+ E +R++A+ A K+ DYH D+ ++ + LD
Sbjct: 433 LSMAE--QRTRAREAG------------------KFAMDYHALIQVDSATEFLGYERLDN 472
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
D I + G ++D++ E + V LI DKT YA +GGQ+ ++G
Sbjct: 473 --------------DSTVIHLYQDGKAVDTLA-EGDEGV-LILDKTPFYAESGGQVGELG 516
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ E+G ++ + I+H G VV + ++ +V +++R + H
Sbjct: 517 -----EISTESGVFDVLDTQKSGQAIIHHG-VVKMGHINNNQSATAQVASQVRASSAKNH 570
Query: 650 TTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIAN 707
+ +HLL+AALR +L QK V SD DFS Y + L+ +++ +E +N ++AN
Sbjct: 571 SATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFS-YDKPLTEQNISQIETMVNQQILAN 629
Query: 708 Q------VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--SDKENV-ISREPCCG 758
+ +D + + + F GE Y D V ++ + +DK+ S E C G
Sbjct: 630 TPAHVEILDIDSAKNKGAMMLF--------GEKYGDTVRVLSMGTTDKDGKPFSIELCGG 681
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENG-KHLSTAAS 808
HV TG I +I + + GVR I+ +TG + V+ G K L+ A+
Sbjct: 682 LHVTRTGDIGLFKIISEQGISAGVRRIEAVTGMGAVNYVQQGDKQLNQLAN 732
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP+ D ++ F N+GM QFK+ FLGL Y R +SQKC+R GGKHNDL G + HHT
Sbjct: 31 IPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVRAVSSQKCVRAGGKHNDLDNVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K+DA A EFLT ++LP DRLY T
Sbjct: 91 FFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWLALPKDRLYVT 132
>gi|359449510|ref|ZP_09239001.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20480]
gi|358044672|dbj|GAA75250.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20480]
Length = 866
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 259/812 (31%), Positives = 384/812 (47%), Gaps = 118/812 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FLD+F + Q H +V SS ++P D ++ F N+GM QFK+VFLG PY R
Sbjct: 4 MTTAQIRQQFLDFFASKQ-HQVVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K++A + A EFLT+ V
Sbjct: 63 ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQEAIKFAWEFLTE-VVK 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L T + DEE + W ++G+ D I + NFW MG TGPCG
Sbjct: 122 LPQEKLLVTIY--------HDDEEAFEYWSKDIGLSEDRIIRIATSDNFWSMGDTGPCGP 173
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI YD G P S D + IEIWN+VF+ + R S T++PL K +DT
Sbjct: 174 CSEIFYDHGEHIWGGPPGSP----EEDGDRFIEIWNLVFMQYNRQSDGTMLPLPKQSVDT 229
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ILQ S Y+ DLF L+ V+ A+ D S R+++D
Sbjct: 230 GMGLERISAILQGVHSNYEIDLFQGLIAAAASVTNAQDMD-----------DKSLRVVAD 278
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R ++D + P + LR ++R A+ + QG +L + E +G
Sbjct: 279 HIRSCAFLISDGVMPSNEGRGYVLRRIIRRAVRHGNKLG--AQGAFFFKLVAALIEQMGQ 336
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ +L RI E EQF E GL +
Sbjct: 337 AYPELAKQQEIIEKVL----RI--------------------EEEQFGKTLERGLAI--- 369
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L + L+ D I GD+ F LYDTYG ++ ++A +++T+ H+ FE+ + +R
Sbjct: 370 -LEESLS-DLKGDVIPGDLVFKLYDTYGFPADLTADVARERQMTIDHKGFEECM--AVQR 425
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT-FPCLD-TNLVGIVIGDQV 540
A+ A K+ DY+ S ++T F D T+ V+ +V
Sbjct: 426 KTAQQAG------------------KFGADYNEQLKSDKHTDFKGYDSTHYSATVV--EV 465
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGL-IFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
F A +++QL + G+ I D+T YA +GGQ D G T
Sbjct: 466 F-------------AGGEAVQLLEDGQEGIVILDRTPFYAESGGQTGDTG-----TITVA 507
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
G+ + L H G V V + + ++ DAR R + HT +H+L+ AL
Sbjct: 508 GGEFNVTNTTKLGNAFAHHGTVQGRIGVNDKVDATID-DAR-RENIKKNHTATHILHEAL 565
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R++L QK V +D DFS + E ++ D + +E+ +ND I ++ M
Sbjct: 566 RQLLGEHVSQKGSLVQADRLRFDFSHF-EAVTKDELRDIERVVNDEIRRNFALNTELMAI 624
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ + + GE Y D+V ++ I D S E C GTHV G I ++
Sbjct: 625 DDAKAKGAMALF-GEKYDDEVRVVTIGD----YSIELCGGTHVERAGDIGLFKIVSESGI 679
Query: 779 NHGVRSIKCLTGDSSKAAV-ENGKHLSTAASF 809
GVR I+ +TG + A V E + LS A+
Sbjct: 680 AAGVRRIEAVTGADAVAYVSEQEQQLSDVAAL 711
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 31 IPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQRCVRAGGKHNDLENVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K++A + A EFLT+ V LP ++L T
Sbjct: 91 FFEMLGNFSFGDYFKQEAIKFAWEFLTE-VVKLPQEKLLVTI 131
>gi|317050904|ref|YP_004112020.1| alanyl-tRNA synthetase [Desulfurispirillum indicum S5]
gi|316945988|gb|ADU65464.1| alanyl-tRNA synthetase [Desulfurispirillum indicum S5]
Length = 893
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 258/802 (32%), Positives = 403/802 (50%), Gaps = 104/802 (12%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
++ +R FL YF ++GH +V SS ++P+ D ++ F N+GM QFKN+FLG Y R A
Sbjct: 13 AQQVRQQFLSYF-ESKGHKVVASSGLIPFDDPTLLFTNAGMNQFKNIFLGNEKRDYNRAA 71
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
+QKCVR GGKHNDL G + HHTFFEMLGN+SF DY+KR+A A EF+T+ + L
Sbjct: 72 TAQKCVRAGGKHNDLENVGVTARHHTFFEMLGNFSFGDYFKREAIEYAWEFITE-VMKLD 130
Query: 134 LDRLYFTYFGGSDQYGLPCDEETRDIWLE-LGVPRDHIKKEGMKCNFWEMGSTGPCGYSS 192
RL+ + F D+E IW + +GVP + I + G K NFW+MG TGPCG S
Sbjct: 131 RSRLWVSVF--------REDDEALAIWRDHIGVPAERILRCGEKDNFWQMGETGPCGPCS 182
Query: 193 EIHYDM-------KGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
EIHYD +G P V + + +EIWN+VF+ + R T+VPL K IDT
Sbjct: 183 EIHYDQGPDVPCTEGGPCG----VECECDRYLEIWNLVFMQYDRQPDGTLVPLPKPSIDT 238
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ERL ++Q +TS Y TDLFLPLL I A G T+T S + D S R+++D
Sbjct: 239 GMGLERLAAVVQGETSNYHTDLFLPLLNRI-----AADCGMTYTRSA-SHQDVSMRVIAD 292
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R T ++D P + LR ++R A+ + + K + + L + E G+
Sbjct: 293 HLRASTFLISDGAIPSNEGRGYVLRRIMRRAMRHANQLGKKE--PYMYSLVCLMEEHYGE 350
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PEI + ++ I+ +E R F N + I+EE +V G++
Sbjct: 351 AFPEIVKNRAMVEEIIYQEERRFANTLDHGLA----------------ILEE--MVAGLQ 392
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+ Q+A D G AF LYDTYG ++ ++ + +T+ F + E K R
Sbjct: 393 K-SAQVALD-------GQSAFKLYDTYGFPLDLTVDILEDRGITVDEAGFYAAMEEQKVR 444
Query: 483 SKA--KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
++A KA ++V + DL+ + + +++ ++ Y F +++G++
Sbjct: 445 ARASWKAVASVTSSE--DLR---LIESRHQQEF------SGYDFLSAKASVIGLL----- 488
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
+ ++++ R+G AW L+ DKT YA +GGQ+ D GV T
Sbjct: 489 -DLQENSLSQVRAG---------EEAW--LLLDKTPFYAESGGQVADTGVV----ATDGG 532
Query: 601 GKVEIGEL-ASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
E+ + S+ G +H G VVS + + G V++R R H+ +HLL+AAL
Sbjct: 533 DIFEVRSVRKSIGGLHLHRG-VVSQGRFSAGDAVTATVNSRRRRNITLNHSATHLLHAAL 591
Query: 660 RRVLTCTYQKSCRVFSD-ECALDFSVYGETLSVDSVAAVEKYIN-DVIANQVQVDRRHMR 717
+ + +++ + D + DF+ + + L+ + + VE +N V+AN R+ +
Sbjct: 592 KSTVGEHVRQAGSLVEDGKLRFDFTHW-KGLTPEELQGVEDQVNAQVMANHAV--RKELM 648
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
+ T + E Y DDV +I + D S E C GTHV TG I ++ +
Sbjct: 649 TLDDAVARGATALFDEKYGDDVRVITMGD----YSMELCGGTHVDATGQIGLFKILSESA 704
Query: 778 YNHGVRSIKCLTGDSSKAAVEN 799
GVR I+ TG + V +
Sbjct: 705 IAAGVRRIEATTGPGALQVVRD 726
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 70/103 (67%), Gaps = 3/103 (2%)
Query: 812 ILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGR 871
+ + G IP+ D ++ F N+GM QFKN+FLG Y R A +QKC+R GGKHNDL G
Sbjct: 32 VASSGLIPFDDPTLLFTNAGMNQFKNIFLGNEKRDYNRAATAQKCVRAGGKHNDLENVGV 91
Query: 872 DSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 914
+ HHTFFEMLGN+SF DY+KR+A A EF+T+ + LDR
Sbjct: 92 TARHHTFFEMLGNFSFGDYFKREAIEYAWEFITE---VMKLDR 131
>gi|392537849|ref|ZP_10284986.1| alanyl-tRNA ligase [Pseudoalteromonas marina mano4]
Length = 863
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 259/812 (31%), Positives = 384/812 (47%), Gaps = 118/812 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FLD+F + Q H +V SS ++P D ++ F N+GM QFK+VFLG PY R
Sbjct: 1 MTTAQIRQQFLDFFASKQ-HQVVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K++A + A EFLT+ V
Sbjct: 60 ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQEAIKFAWEFLTE-VVK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L T + DEE + W ++G+ D I + NFW MG TGPCG
Sbjct: 119 LPQEKLLVTIY--------HDDEEAFEYWSKDIGLSEDRIIRIATSDNFWSMGDTGPCGP 170
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI YD G P S D + IEIWN+VF+ + R S T++PL K +DT
Sbjct: 171 CSEIFYDHGEHIWGGPPGSP----EEDGDRFIEIWNLVFMQYNRQSDGTMLPLPKQSVDT 226
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ILQ S Y+ DLF L+ V+ A+ D S R+++D
Sbjct: 227 GMGLERISAILQGVHSNYEIDLFQGLIAAAASVTNAQDMD-----------DKSLRVVAD 275
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R ++D + P + LR ++R A+ + QG +L + E +G
Sbjct: 276 HIRSCAFLISDGVMPSNEGRGYVLRRIIRRAVRHGNKLG--AQGAFFFKLVAALIEQMGQ 333
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ +L RI E EQF E GL +
Sbjct: 334 AYPELAKQQEIIEKVL----RI--------------------EEEQFGKTLERGLAI--- 366
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L + L+ D I GD+ F LYDTYG ++ ++A +++T+ H+ FE+ + +R
Sbjct: 367 -LEESLS-DLKGDVIPGDLVFKLYDTYGFPADLTADVARERQMTIDHKGFEECM--AVQR 422
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT-FPCLD-TNLVGIVIGDQV 540
A+ A K+ DY+ S ++T F D T+ V+ +V
Sbjct: 423 KTAQQAG------------------KFGADYNEQLKSDKHTDFKGYDSTHYSATVV--EV 462
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGL-IFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
F A +++QL + G+ I D+T YA +GGQ D G T
Sbjct: 463 F-------------AGGEAVQLLEDGQEGIVILDRTPFYAESGGQTGDTG-----TITVA 504
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
G+ + L H G V V + + ++ DAR R + HT +H+L+ AL
Sbjct: 505 GGEFNVTNTTKLGNAFAHHGTVQGRIGVNDKVDATID-DAR-RENIKKNHTATHILHEAL 562
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R++L QK V +D DFS + E ++ D + +E+ +ND I ++ M
Sbjct: 563 RQLLGEHVSQKGSLVQADRLRFDFSHF-EAVTKDELRDIERVVNDEIRRNFALNTELMAI 621
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ + + GE Y D+V ++ I D S E C GTHV G I ++
Sbjct: 622 DDAKAKGAMALF-GEKYDDEVRVVTIGD----YSIELCGGTHVERAGDIGLFKIVSESGI 676
Query: 779 NHGVRSIKCLTGDSSKAAV-ENGKHLSTAASF 809
GVR I+ +TG + A V E + LS A+
Sbjct: 677 AAGVRRIEAVTGADAVAYVSEQEQQLSDVAAL 708
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 28 IPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQRCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K++A + A EFLT+ V LP ++L T
Sbjct: 88 FFEMLGNFSFGDYFKQEAIKFAWEFLTE-VVKLPQEKLLVTI 128
>gi|401825564|ref|XP_003886877.1| Alanyl-tRNA synthetase [Encephalitozoon hellem ATCC 50504]
gi|392998033|gb|AFM97896.1| Alanyl-tRNA synthetase [Encephalitozoon hellem ATCC 50504]
Length = 864
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 247/811 (30%), Positives = 402/811 (49%), Gaps = 109/811 (13%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
++ +R SFLDYF ++ H +V SS +VPY DD++ F NSGM QFK LG + R
Sbjct: 5 TEKLRRSFLDYFA-SKSHRVVNSSSVVPYEDDTLLFTNSGMVQFKKNLLG-ERSELRRAC 62
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
+ Q+C+R GGKHNDL G+D+YHHT+FEMLGNWSF DY+K +A A EFL + + L
Sbjct: 63 SVQRCIRAGGKHNDLDDVGKDTYHHTYFEMLGNWSFGDYFKEEAIGFAWEFLVE-VLKLS 121
Query: 134 LDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSE 193
D+LY TY+ D+E+R IWL+ +P + I K NFWEMG TGPCG +E
Sbjct: 122 KDKLYVTYYD-------ELDKESRRIWLKY-LPSNRIIPASYKDNFWEMGDTGPCGPCTE 173
Query: 194 IHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLV 253
IHYD G +++ VN D ++IEIWNIVFI + R +A + PL + IDTG+G ERL+
Sbjct: 174 IHYDRIGNRNAS-ELVNKDDPNVIEIWNIVFIEYNR-TASGLTPLERKCIDTGIGLERLL 231
Query: 254 TILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVA 313
+IL + S Y D F +++ IE+ K + S ++ D ++R++SD+ R I V
Sbjct: 232 SILIDVKSNYLIDSFSTIIKAIEEHCDFK-----YEDSEKS-TDVAFRVISDHCRTIAVC 285
Query: 314 LADNM-FPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDS 370
+ D + F + LR ++R A+ + +V +K+G L E++ I
Sbjct: 286 IYDKVDFSNDGVGYVLRRILRRAVRYAHEVLGLKEGVL--------EELVKIAAGTIGID 337
Query: 371 INKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN-IMEEPGLVLGVKYLTKQLA 429
+ + + EE+ L+K +E+FN I E G
Sbjct: 338 LESTECVSREEALFMKTLKKG--------------IERFNKIAENNG------------- 370
Query: 430 RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH---EAFEQKLNELKERSKAK 486
+ISG+ F LYDTYG ++ + +A + + + + E+F Q+ E+ ++SK
Sbjct: 371 ------KISGEDLFLLYDTYGFPVDLTELMAREQNIEIDYTNFESFRQRAIEVSKKSKGT 424
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
+ DI L FP T+D +KY+ + +++ ++ V+G+ +
Sbjct: 425 KINIDGDI----LSKFPPTNDSFKYERNN-----------MNSTVLFAVVGNDIIT---- 465
Query: 547 AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIG 606
D ++ +GL+FDKT YA GGQ+ D G + G +
Sbjct: 466 -----------DPGEIPEGVELGLVFDKTCFYAECGGQVGDTGKITFYCGEKSIGTFNVT 514
Query: 607 ELASLEGKIVHFGNVV--SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT 664
+ +++ +VH G + +S++ S +R MR HT +HLLN LR ++
Sbjct: 515 DTQAVKKFVVHKGILEGNASYQALQAYNS------ELRRRTMRNHTGTHLLNFFLRTIIK 568
Query: 665 CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFL 724
T Q+ V ++ DF G L+ + + VEK IN+ I + +V+ + +
Sbjct: 569 -TEQRGSLVDPEKLRFDFE--GRKLTNEELEEVEKKINEFIKSNAKVESVILDRCQALEN 625
Query: 725 THLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRS 784
+++ + E YP+ V +I + + ++ E C GTHV N + ++ + R
Sbjct: 626 SNIVRMRNEEYPEKVRVITMK-SDGLVIEEMCGGTHVTNVSDVGRFRIVNETGVSANTRR 684
Query: 785 IKCLTGDSSKAAVENGKHLSTAASFSQILNV 815
I +TG ++ E + + + +++NV
Sbjct: 685 IVGVTGKKAQELDEEAELYLSKLNIGEVVNV 715
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+PY DD++ F NSGM QFK LG + R + Q+CIR GGKHNDL G+D+YHHT
Sbjct: 30 VPYEDDTLLFTNSGMVQFKKNLLG-ERSELRRACSVQRCIRAGGKHNDLDDVGKDTYHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+FEMLGNWSF DY+K +A A EFL + + L D+LY T+
Sbjct: 89 YFEMLGNWSFGDYFKEEAIGFAWEFLVE-VLKLSKDKLYVTY 129
>gi|416234267|ref|ZP_11629755.1| alanyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
gi|326565354|gb|EGE15532.1| alanyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
Length = 893
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 256/831 (30%), Positives = 401/831 (48%), Gaps = 136/831 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S +R +F+D+F + Q HT V SS ++P+ D ++ F N+GM QFK+ FLGL Y R
Sbjct: 4 MQSNEVRQAFIDFFVSKQ-HTHVPSSSLIPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
+SQKCVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA A EFLT +
Sbjct: 63 AVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWL 122
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEM 182
+LP DRLY T + D+E DIW ++G+P++ I G NFW M
Sbjct: 123 ALPKDRLYVTVY--------HTDDEAFDIWHKDIGLPQERIIAIGDNKGGAYQSDNFWMM 174
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARV-NADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
G TGPCG +EI YD L + D + IEIWN VF+ R T+ PL K
Sbjct: 175 GDTGPCGPCTEIFYDHGEHIWGGLPGTPDEDGDRYIEIWNCVFMQFNRQKDGTMQPLPKP 234
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
+DTG+G ER+ I+Q Y+TD+F L+ + G T + S +
Sbjct: 235 SVDTGMGLERISAIMQGVHGNYETDIFTKLMTKAVNIIG-------LPTDTDIQNEPSLK 287
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLVKELS 353
+L+D+ R + +AD + P + LR ++R A+ L + D F +L
Sbjct: 288 VLADHIRSVAFLIADGVIPSNEGRGYVLRRIIRRAVRHGNKLGATDAF-------FYQLV 340
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+ +A+I+GD YP+++ +KI+ +A +KE + KT
Sbjct: 341 HPLADIMGDAYPQLRHEQHKIE--------------QAILKEEEQFAKT----------- 375
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
L G+K L+++L ++G+ F LYDTYG ++ ++ K +T+ FE
Sbjct: 376 ---LSQGLKLLSQELDSLQQGDALAGETVFKLYDTYGFPADLTADIVREKGITIDEAGFE 432
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCLDT 529
+ E +R++A+ A K+ DYH D+ ++ + LD
Sbjct: 433 LSMAE--QRTRAREAG------------------KFAMDYHALIQVDSATEFLGYERLDN 472
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
D I + G ++D++ E + V LI DKT YA +GGQ+ ++G
Sbjct: 473 --------------DSTVIHLYQDGKAVDTLA-EGDEGV-LILDKTPFYAESGGQVGELG 516
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ E+G ++ + I+H G VV + ++ +V +++R + H
Sbjct: 517 -----EISTESGVFDVLDTQKSGQAIIHHG-VVKMGHINNNQSATAQVASQVRASSAKNH 570
Query: 650 TTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIAN 707
+ +HLL+AALR +L QK V SD DFS Y + L+ +++ +E +N ++AN
Sbjct: 571 SATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFS-YDKPLTEQNISQIEIMVNQQILAN 629
Query: 708 Q------VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--SDKENV-ISREPCCG 758
+ +D + + + F GE Y D V ++ + +DK+ S E C G
Sbjct: 630 TPAHVEILDIDSAKNKGAMMLF--------GEKYGDTVRVLSMGTTDKDGKPFSIELCGG 681
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENG-KHLSTAAS 808
HV TG I +I + + GVR I+ +TG + V+ G K L+ A+
Sbjct: 682 LHVTRTGDIGLFKIISEQGISAGVRRIEAVTGMGAVNYVQQGDKQLNQLAN 732
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP+ D ++ F N+GM QFK+ FLGL Y R +SQKC+R GGKHNDL G + HHT
Sbjct: 31 IPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVRAVSSQKCVRAGGKHNDLDNVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K+DA A EFLT ++LP DRLY T
Sbjct: 91 FFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWLALPKDRLYVT 132
>gi|392556041|ref|ZP_10303178.1| alanyl-tRNA ligase [Pseudoalteromonas undina NCIMB 2128]
Length = 863
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 259/812 (31%), Positives = 382/812 (47%), Gaps = 118/812 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FLD+F + Q H +V SS ++P D ++ F N+GM QFK+VFLG PY R
Sbjct: 1 MTTAQIRQQFLDFFASKQ-HQVVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA + A EFLT+ V
Sbjct: 60 ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L T + DEE W ++G+P D I + NFW MG TGPCG
Sbjct: 119 LPKEKLLVTIY--------HDDEEAFGYWANDIGLPEDRIIRIATSDNFWSMGDTGPCGP 170
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI YD G P + D + IEIWN+VF+ + R S T+ PL K +DT
Sbjct: 171 CSEIFYDHGEHIWGGPPGTP----EEDGDRFIEIWNLVFMQYNRQSDGTMEPLPKQSVDT 226
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ILQ S Y+ DLF L+ V+ A+ D S R+++D
Sbjct: 227 GMGLERISAILQGVHSNYEIDLFQGLIAAAASVTNAQDMD-----------DKSLRVVAD 275
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R ++D + P + LR ++R A+ + +G +L + E +G
Sbjct: 276 HIRSCAFLISDGVMPSNEGRGYVLRRIIRRAVRHGNKLG--AKGAFFYKLVAALIEQMGQ 333
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ +L RI E EQF E GL +
Sbjct: 334 AYPELAKQQEIIEKVL----RI--------------------EEEQFGKTLERGLAI--- 366
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L + L+ D + I GD+ F LYDTYG ++ ++A +++T+ H+ FE + +R
Sbjct: 367 -LEESLS-DLTGDVIPGDLVFKLYDTYGFPADLTADVARERQMTIDHQGFEACM--AVQR 422
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT-FPCLDTN-LVGIVIGDQV 540
A+ A K+ DY+ S ++T F D+N G VI ++
Sbjct: 423 KTAQQAG------------------KFGADYNEQLKSDKHTDFKGYDSNHYRGTVI--EI 462
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLI-FDKTNLYATAGGQIDDIGVAYLTNTTQE 599
F A +S+ L + G+I D+T YA +GGQI D G T
Sbjct: 463 F-------------AGGESVSLLEDGQQGIIVLDRTPFYAESGGQIGDSGT-----ITVA 504
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
G+ + L H G V V + + ++ DAR R + HT +H+L+ AL
Sbjct: 505 GGEFNVTNTTKLGNAFAHHGTVQGRIGVNDKVDATID-DAR-RESIKKNHTATHILHEAL 562
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R++L QK V D DFS + E ++ + +E+ +ND I ++ M
Sbjct: 563 RQLLGEHVSQKGSLVQPDRLRFDFSHF-EAVTKQELREIERVVNDEIRRNFALNTELMAI 621
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ + + GE Y D+V ++ I D S E C GTHV G I ++
Sbjct: 622 DDAKAKGAMALF-GEKYDDEVRVVTIGD----YSIELCGGTHVERAGDIGLFKIVSESGI 676
Query: 779 NHGVRSIKCLTGDSSKAAV-ENGKHLSTAASF 809
GVR I+ +TG + A V E + L+ A+
Sbjct: 677 AAGVRRIEAVTGAEAIAYVNEQEQQLADVAAL 708
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 28 IPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQRCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K+DA + A EFLT+ V LP ++L T
Sbjct: 88 FFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVKLPKEKLLVTI 128
>gi|150025983|ref|YP_001296809.1| alanyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
gi|205830094|sp|A6H0Y3.1|SYA_FLAPJ RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|149772524|emb|CAL44007.1| Alanine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
Length = 887
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 249/799 (31%), Positives = 370/799 (46%), Gaps = 94/799 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ SK IR +L +F ++GH +V S+PIV D ++ F NSGM QFK FLG PR
Sbjct: 1 MTSKEIRQQYLKFF-ESKGHLIVPSAPIVLKDDPTLMFNNSGMAQFKEYFLGNGTPKSPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 IADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEAINWAWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P LY + F GS + +P D+E DIW L + D I K NFWEMG GPCG
Sbjct: 119 IPKQNLYVSVFEGSKEDNVPFDQEAWDIWKGL-IDEDRIILGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ A VN D ++EIWN VF+ R + ++ L ++DTG+
Sbjct: 178 SEIHVDLRTPEEKAQVSGKSLVNNDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTT----SNRTDLDTSYRML 303
GFERL LQ KTS YDTD+F PL+E + +++G K N+T++ + R++
Sbjct: 238 GFERLCMALQGKTSNYDTDVFTPLIEKVTQITGYKYTSNEVKNISEEQNKTNI--AIRVI 295
Query: 304 SDYSRMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D+ R + A+AD P T + + + F + + +L +A +G
Sbjct: 296 VDHVRAVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLDTKEPFITKLVAVLASQMG 355
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
+ +PEI+ + ++ EE F LR LEQ G+
Sbjct: 356 EFFPEIKSQQQLVTNVIREEEASF--LRT---------------LEQ-----------GL 387
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
+ L K +A E+SG AF LYDT+G ++ + K L F + E K
Sbjct: 388 QLLDKVVAETKG-KEVSGAKAFELYDTFGFPIDLTALILREKGYELDEAGFNAAMQEQKN 446
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
RS +AAS V + D+ TF D + I
Sbjct: 447 RS--RAASEV-----------------FTEDWSVLIPGNIETFVGYDKTENDVKI----- 482
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN----TT 597
R + + D I + ++ D T Y GGQ+ D G N +
Sbjct: 483 ------TRIRKVNSKKDGILYQ------IVLDNTPFYPEGGGQVGDKGTLVSANDSSDSE 530
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
Q ++I + I+HF + + G ++ V+ +R + H+ +HL++
Sbjct: 531 QAKQTIDIIDTKKENNLILHFAKQLPE-NIETGFVAK--VNTNLRASTSKNHSATHLMHL 587
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR +L T QK V D DFS + + +S D + VE +N I Q+Q+
Sbjct: 588 ALRSILGTHVEQKGSLVNPDYLRFDFSHFSK-VSDDQLRQVEASVNAQIEAQLQLTEHRN 646
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + GE Y D+V +I+ + S+E C G HV NT I ++
Sbjct: 647 IPIKEALDKGAMALFGEKYGDNVRMIEFGE-----SKELCGGIHVKNTAQIWHFKILSEG 701
Query: 777 SYNHGVRSIKCLTGDSSKA 795
+ G+R I+ +TGD+ KA
Sbjct: 702 AVAAGIRRIEAITGDAVKA 720
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK FLG PR+A++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFNNSGMAQFKEYFLGNGTPKSPRIADTQKCLRVSGKHNDLEDVGFDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ +P LY +
Sbjct: 92 LGNWSFGDYFKKEAINWAWELLTE-VYKIPKQNLYVS 127
>gi|260061769|ref|YP_003194849.1| alanyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
gi|88785901|gb|EAR17070.1| alanyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
Length = 871
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 259/802 (32%), Positives = 384/802 (47%), Gaps = 118/802 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IRS FL +F + +GH +V S+P+V D ++ FVN+GM FK FLG++ YPR
Sbjct: 1 MTSREIRSRFLTFFKD-RGHRIVPSAPLVVKDDPTLLFVNAGMNPFKEYFLGVSNPKYPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+K + A EFLT+
Sbjct: 60 VADTQKCLRVSGKHNDLEEVGRDTYHHTLFEMLGNWSFGDYFKEETIGWAWEFLTEV-CG 118
Query: 132 LPLDRLYFTYF-GGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+ DRLY T F G SD L D+E D W + +P D I K NFWEMG GPCG
Sbjct: 119 IDRDRLYVTIFEGSSDADALERDQEAYDFWKAI-LPEDRILMGSKKDNFWEMGDQGPCGP 177
Query: 191 SSEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
SEIH D++ E P S L VN D +++EIWN+VFI + R + ++ PL + +ID
Sbjct: 178 CSEIHVDIRPEEERRKTPGSEL--VNQDHPEVVEIWNLVFIQYNRKADGSLEPLPEKHID 235
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
TG+GFERL +LQ S YDTDLF PL+ I K++G K YG++ + D + R+++
Sbjct: 236 TGMGFERLCMVLQGVRSNYDTDLFTPLIREIGKITG-KDYGQS------EEDDIAIRVIA 288
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D+ R ++ +AD P + +R ++R A+ ++ + + + +AE +G
Sbjct: 289 DHIRAVSFTIADGQLPGNSGAGYVIRRILRRAIRYGFTFLGAREPFMFRLVGTLVAE-MG 347
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
+ +PE L E+ R+ +N+ + + +KT LEQ G+
Sbjct: 348 EAFPE-----------LAEQRRLVENVVREEEVSF---LKT---LEQ-----------GL 379
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
L +A T + G AF LYDT+G ++ + + L + F+ + E K+
Sbjct: 380 ARLDAVIAETRGKT-VDGGRAFELYDTFGFPIDLTSLILRERGYELDRQGFDAAMKEQKD 438
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
RS+A + S D H S+ + L+
Sbjct: 439 RSRAASESAAEDW----------------VKVHPGPASEFVGYDALEA------------ 470
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYL 593
+ IR R S + L L+ D T Y GGQ+ D G V +
Sbjct: 471 ---RSRIRKYRKVESKKTGTLYQ-----LVLDTTPFYPEGGGQVGDSGHLEGSGGAVTEI 522
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
+T +EN +I+H + + PG VDA R R HT +H
Sbjct: 523 LDTRKEN------------NEILH---ITEALPEDPGAEFLAVVDAERRKQTRRNHTATH 567
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
LL+ ALR VL + QK V DFS + + L + + VE ++N+ IA+ + V+
Sbjct: 568 LLHQALREVLGSHVEQKGSAVQPGYLRFDFSHFSK-LKDEELRRVEDFVNERIADGLDVE 626
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
+ + + GE Y D V + D S E C GTH NT I +
Sbjct: 627 IKKGVPMQEALEAGAMALFGEKYGDTVRTVRFGD-----SIELCGGTHADNTAEIWHFKI 681
Query: 773 IGYKSYNHGVRSIKCLTGDSSK 794
+ + GVR I+ +T D+ +
Sbjct: 682 LSESAVAAGVRRIEAITSDAVR 703
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ FVN+GM FK FLG++ YPRVA++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLLFVNAGMNPFKEYFLGVSNPKYPRVADTQKCLRVSGKHNDLEEVGRDTYHHTLFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K + A EFLT+ + DRLY T
Sbjct: 92 LGNWSFGDYFKEETIGWAWEFLTE-VCGIDRDRLYVT 127
>gi|114566020|ref|YP_753174.1| alanyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|122318869|sp|Q0AZQ1.1|SYA_SYNWW RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|114336955|gb|ABI67803.1| alanyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 880
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 260/799 (32%), Positives = 391/799 (48%), Gaps = 121/799 (15%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
S IR +FL+YF +GH++V+SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 SAEIRKTFLEYF-EERGHSVVESSSLVPVNDPTLLFTNAGMNQFKDVFLGLDKRKYVRAT 62
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
+SQKCVR GGKHNDL GR HHTFFEMLGN+SF DY+KR+A A EFLT+ V LP
Sbjct: 63 SSQKCVRAGGKHNDLDTVGRTPRHHTFFEMLGNFSFGDYFKREAIGYAWEFLTEV-VGLP 121
Query: 134 LDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSS 192
++L+ T + D+E D+W E+ G+ I + G K NFW MG TGPCG S
Sbjct: 122 EEKLWVTIY--------QDDDEAADLWPEISGIDPGRIVRLGEKDNFWSMGDTGPCGPCS 173
Query: 193 EIHYDMK-----GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
EI YD G P + + DR +EIWN+VF+ R + + PL + IDTG+
Sbjct: 174 EILYDRGIEYSCGAPDCGIGVCDCDR--WLEIWNLVFMQFNRDESGEMTPLPRPSIDTGM 231
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ERL +ILQ S +DTDLF+P+++ IE+++G K Y + + +R+++D+S
Sbjct: 232 GLERLSSILQGVDSNFDTDLFIPIIKRIEELTG-KAY-------EQGERGFPFRVIADHS 283
Query: 308 RMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNI---AEILGDVY 364
R + +AD + P R V +L F G L N+ +I+ + Y
Sbjct: 284 RACSFLIADGVLPSNDG--RGYVLRRILRRALRFGRFLGIEGSFLYKNVDVVCDIMQEAY 341
Query: 365 PEI---QDSINKIQLILGEESRIF----DNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
PE+ QD I ++ I EE R D L+KA IME
Sbjct: 342 PELLEKQDFIKEV--IRLEEERFLLTLNDGLKKAE-----------------EIMER--- 379
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
AR I G+ AF LYDTYG ++ +++A + TL F++ +
Sbjct: 380 -----------ARQRGDNVIPGEEAFMLYDTYGFPLDLTEDMAEENQFTLDKAGFDRSME 428
Query: 478 ELKERSKAKAASNVPDI----DLMDLKHFPVTDDKYK-YDYHYDTNSKRYTFPCLDTNLV 532
E +R +A+ A+ D+ L+ K + + Y+ D ++ L+
Sbjct: 429 E--QRQRARQANKGEDLLGQERLLSEKLAGIAPSSFTGYENSRD-----------ESVLL 475
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
I+ G ++ +DK A +G V LI +T YA +GGQ+ D G+
Sbjct: 476 AIIKGSEL--MDK-----ALNGEE-----------VILITARTPFYAESGGQVADCGI-- 515
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+ G + + ++ L I+H+G V G++ +++D R+ R HT +
Sbjct: 516 ---IKGQEGLLRVQDVKKLSAWILHYGIVEGVLTTGEGVS--LQLDDPARMDTARNHTAT 570
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL+ ALR VL QK V DFS + + LS + ++ +E+ +N+ I V
Sbjct: 571 HLLHRALREVLGEHAQQKGSLVEPARLRFDFS-HLKALSSEELSRIEQMVNEAIWKLYPV 629
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
+ + + + GE Y ++V ++ + + S E C GTHV NTG I
Sbjct: 630 TTTVTALGQAREMGAMALF-GEKYGEEVRVVQV----DTYSSELCGGTHVQNTGQIGLFK 684
Query: 772 VIGYKSYNHGVRSIKCLTG 790
+ G S G+R I+ +TG
Sbjct: 685 ITGEGSIGSGLRRIEAITG 703
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R +SQKC+R GGKHNDL GR HHT
Sbjct: 29 VPVNDPTLLFTNAGMNQFKDVFLGLDKRKYVRATSSQKCVRAGGKHNDLDTVGRTPRHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+KR+A A EFLT+ V LP ++L+ T
Sbjct: 89 FFEMLGNFSFGDYFKREAIGYAWEFLTE-VVGLPEEKLWVTI 129
>gi|205830243|sp|Q1GHA1.2|SYA_SILST RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 883
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 250/813 (30%), Positives = 385/813 (47%), Gaps = 109/813 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FL+YF QGH +V SSP+VP D ++ F NSGM QFKN F G+ Y R +Q
Sbjct: 7 IRSTFLNYFAK-QGHEVVDSSPLVPRNDPTLMFTNSGMVQFKNCFTGVDRRDYVRATTAQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K +A A E +T +P D+
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKNEAIPFAWELITG-EFDIPKDK 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHY 196
LY T + D+E +IW ++GVP + I + NFW+MG TGPCG +EI Y
Sbjct: 125 LYTTVY--------HTDDEAFEIWKKVGVPEERIIRIATSDNFWQMGDTGPCGPCTEIFY 176
Query: 197 D-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
D G P S D + IEIWN+VF+ ++R + ++V L IDTG+G ER
Sbjct: 177 DHGDHIWGGPPGSP----EEDGDRFIEIWNLVFMQNERFADGSMVDLDMQSIDTGMGLER 232
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
+ +LQ Y+TDLF L+E V+ ++PYG D + +R+++D+ R +
Sbjct: 233 IAALLQGTHDNYETDLFKYLIEASATVTKSEPYG---------DQNVHHRVIADHLRSCS 283
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
+A+ + P + LR ++R A+ + + ++ +L + +G YPE+
Sbjct: 284 FLIAEGVLPSNEGRGYVLRRIMRRAMRHASLLGATD--PVMHKLVPALVSQMGAAYPELG 341
Query: 369 DSINKIQLIL-GEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
I+ EE+R L + K L +LE+ +++
Sbjct: 342 QGQALIEETFEQEETRFLKTLDRG----LKLLDDASGDLEKGDVL--------------- 382
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
G+ AF LYDT+G ++ Q+ AK + + + F+ + KE+S+A
Sbjct: 383 ----------PGETAFKLYDTFGFPLDLTQDALRAKGIEVDTDGFDAAMKAQKEQSRAGG 432
Query: 488 ASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHA 547
I L D T+ K Y F +D +G + +
Sbjct: 433 ------IGLGDA-----------------TDVKVY-FDIVDAEGTTEFLGYETEKAEGQI 468
Query: 548 IRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGE 607
+ + GA +DS + + V +I ++T Y +GGQ+ D G+ T E G I +
Sbjct: 469 VALVKDGARVDSAKAGES--VQIILNQTPFYGESGGQVGDSGM-----LTVEGGAARITD 521
Query: 608 LASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CT 666
+EG +H V ++ G + +EVD R H+ +HLL+ ALR L
Sbjct: 522 TKKVEGLFLHIAEVTEG-EIAVGSGAAMEVDHVRRSQIRANHSATHLLHEALRNALGDHV 580
Query: 667 YQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTH 726
QK +D DFS + + +S + ++ + +ND I V R M + L
Sbjct: 581 AQKGSLNAADRLRFDFS-HNKAVSAEDLSKISAEVNDFIRQNSAVSTRIMTPDDARALGA 639
Query: 727 LTVIPGEIYPDDVILIDI--------SDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ GE Y ++V ++ + +D E S E C GTHV TG I + ++G +
Sbjct: 640 QALF-GEKYGEEVRVVSMGRAPTGKGADGE-TYSIELCGGTHVKQTGDIGTFVILGDSAS 697
Query: 779 NHGVRSIKCLTGDSSKAAVEN--GKHLSTAASF 809
+ GVR I+ LTG ++ A +E G+ AAS
Sbjct: 698 SAGVRRIEALTGAAAFAHLEREAGRMAEVAASL 730
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFKN F G+ Y R +QKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFTNSGMVQFKNCFTGVDRRDYVRATTAQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K +A A E +T +P D+LY T
Sbjct: 89 FFEMLGNFSFGDYFKNEAIPFAWELITG-EFDIPKDKLYTT 128
>gi|421779634|ref|ZP_16216126.1| alanyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|407813344|gb|EKF84126.1| alanyl-tRNA synthetase [Moraxella catarrhalis RH4]
Length = 893
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 256/831 (30%), Positives = 401/831 (48%), Gaps = 136/831 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S +R +F+D+F + Q HT V SS ++P+ D ++ F N+GM QFK+ FLGL Y R
Sbjct: 4 MQSNEVRQAFIDFFVSKQ-HTHVPSSSLIPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
+SQKCVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA A EFLT +
Sbjct: 63 AVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWL 122
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEM 182
+LP DRLY T + D+E DIW ++G+P++ I G NFW M
Sbjct: 123 ALPKDRLYVTVY--------HTDDEAFDIWHKDIGLPQERIIAIGDNKGGAYQSDNFWMM 174
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARV-NADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
G TGPCG +EI YD L + D + IEIWN VF+ R T+ PL K
Sbjct: 175 GDTGPCGPCTEIFYDHGEHIWGGLPGTPDEDGDRYIEIWNCVFMQFNRQKDGTMQPLPKP 234
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
+DTG+G ER+ I+Q Y+TD+F L+ + G T + S +
Sbjct: 235 SVDTGMGLERISAIMQGVHGNYETDIFTKLMTKAVNIIG-------LPTDTDIQNEPSLK 287
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLVKELS 353
+L+D+ R + +AD + P + LR ++R A+ L + D F +L
Sbjct: 288 VLADHIRSVAFLIADGVIPSNEGRGYVLRRIIRRAVRHGNKLGATDAF-------FYQLV 340
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+ +A+I+GD YP+++ +KI+ +A +KE + KT
Sbjct: 341 HPLADIMGDAYPQLRHEQHKIE--------------QAILKEEEQFAKT----------- 375
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
L G+K L+++L ++G+ F LYDTYG ++ ++ K +T+ FE
Sbjct: 376 ---LSQGLKLLSQELDSLQQGDALAGETVFKLYDTYGFPADLTADIVREKGITIDEAGFE 432
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCLDT 529
+ E +R++A+ A K+ DYH D+ ++ + LD
Sbjct: 433 LSMAE--QRTRAREAG------------------KFAMDYHALIQVDSATEFLGYERLDN 472
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
D I + G ++D++ E + V LI DKT YA +GGQ+ ++G
Sbjct: 473 --------------DSTVIHLYQDGKAVDTLA-EGDEGV-LILDKTPFYAESGGQVGELG 516
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ E+G ++ + I+H G VV + ++ +V +++R + H
Sbjct: 517 -----EISTESGVFDVLDTQKSGQAIIHHG-VVKMGHINNNQSATAQVASQVRASSAKNH 570
Query: 650 TTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIAN 707
+ +HLL+AALR +L QK V SD DFS Y + L+ +++ +E +N ++AN
Sbjct: 571 SATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFS-YDKPLTEQNISQIETMVNQQILAN 629
Query: 708 Q------VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--SDKENV-ISREPCCG 758
+ +D + + + F GE Y D V ++ + +DK+ S E C G
Sbjct: 630 TPAHVEILDIDSAKNKGAMMLF--------GEKYGDTVRVLSMGTTDKDGKPFSIELCGG 681
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENG-KHLSTAAS 808
HV TG I +I + + GVR I+ +TG + V+ G K L+ A+
Sbjct: 682 LHVTRTGDIGLFKIISEQGISAGVRRIEAVTGMGAVNYVQQGDKQLNQLAN 732
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP+ D ++ F N+GM QFK+ FLGL Y R +SQKC+R GGKHNDL G + HHT
Sbjct: 31 IPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVRAVSSQKCVRAGGKHNDLDNVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K+DA A EFLT ++LP DRLY T
Sbjct: 91 FFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWLALPKDRLYVT 132
>gi|416254304|ref|ZP_11638684.1| alanyl-tRNA synthetase [Moraxella catarrhalis O35E]
gi|326577502|gb|EGE27382.1| alanyl-tRNA synthetase [Moraxella catarrhalis O35E]
Length = 893
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 256/831 (30%), Positives = 401/831 (48%), Gaps = 136/831 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S +R +F+D+F + Q HT V SS ++P+ D ++ F N+GM QFK+ FLGL Y R
Sbjct: 4 MQSNEVRQAFIDFFVSKQ-HTHVPSSSLIPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
+SQKCVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA A EFLT +
Sbjct: 63 AVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWL 122
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEM 182
+LP DRLY T + D+E DIW ++G+P++ I G NFW M
Sbjct: 123 ALPKDRLYVTVY--------HTDDEAFDIWHKDIGLPQERIIAIGDNKGGAYQSDNFWMM 174
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARV-NADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
G TGPCG +EI YD L + D + IEIWN VF+ R T+ PL K
Sbjct: 175 GDTGPCGPCTEIFYDHGEHIWGGLPGTPDEDGDRYIEIWNCVFMQFNRQKDGTMQPLPKP 234
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
+DTG+G ER+ I+Q Y+TD+F L+ + G T + S +
Sbjct: 235 SVDTGMGLERISAIMQGVHGNYETDIFTKLMTKAVNIIG-------LPTDTDIQNEPSLK 287
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLVKELS 353
+L+D+ R + +AD + P + LR ++R A+ L + D F +L
Sbjct: 288 VLADHIRSVAFLIADGVIPSNEGRGYVLRRIIRRAVRHGNKLGATDAF-------FYQLV 340
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+ +A+I+GD YP+++ +KI+ +A +KE + KT
Sbjct: 341 HPLADIMGDAYPQLRHEQHKIE--------------QAILKEEEQFAKT----------- 375
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
L G+K L+++L ++G+ F LYDTYG ++ ++ K +T+ FE
Sbjct: 376 ---LSQGLKLLSQELDSLQQGDVLAGETVFKLYDTYGFPADLTADIVREKGITIDEAGFE 432
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCLDT 529
+ E +R++A+ A K+ DYH D+ ++ + LD
Sbjct: 433 LSMAE--QRTRAREAG------------------KFAMDYHALIQVDSATEFLGYERLDN 472
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
D I + G ++D++ E + V LI DKT YA +GGQ+ ++G
Sbjct: 473 --------------DSTVIHLYQDGKAVDTLA-EGDEGV-LILDKTPFYAESGGQVGELG 516
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ E+G ++ + I+H G VV + ++ +V +++R + H
Sbjct: 517 -----EISTESGVFDVLDTQKSGQAIIHHG-VVKMGHINNNQSATAQVASQVRASSAKNH 570
Query: 650 TTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIAN 707
+ +HLL+AALR +L QK V SD DFS Y + L+ +++ +E +N ++AN
Sbjct: 571 SATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFS-YDKPLTEQNISQIETMVNQQILAN 629
Query: 708 Q------VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--SDKENV-ISREPCCG 758
+ +D + + + F GE Y D V ++ + +DK+ S E C G
Sbjct: 630 TPAHVEILDIDSAKNKGAMMLF--------GEKYGDTVRVLSMGTTDKDGKPFSIELCGG 681
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENG-KHLSTAAS 808
HV TG I +I + + GVR I+ +TG + V+ G K L+ A+
Sbjct: 682 LHVTRTGDIGLFKIISEQGISAGVRRIEAITGMGAVNYVQQGDKQLNQLAN 732
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP+ D ++ F N+GM QFK+ FLGL Y R +SQKC+R GGKHNDL G + HHT
Sbjct: 31 IPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVRAVSSQKCVRAGGKHNDLDNVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K+DA A EFLT ++LP DRLY T
Sbjct: 91 FFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWLALPKDRLYVT 132
>gi|416247553|ref|ZP_11635736.1| alanyl-tRNA synthetase [Moraxella catarrhalis BC8]
gi|326569365|gb|EGE19425.1| alanyl-tRNA synthetase [Moraxella catarrhalis BC8]
Length = 893
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 255/831 (30%), Positives = 401/831 (48%), Gaps = 136/831 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S +R +F+D+F + Q HT V SS ++P+ D ++ F N+GM QFK+ FLGL Y R
Sbjct: 4 MQSNEVRQAFIDFFVSKQ-HTHVPSSSLIPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
+SQKCVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA A EFLT +
Sbjct: 63 AVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWL 122
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEM 182
+LP DRLY T + D+E DIW ++G+P++ I G NFW M
Sbjct: 123 ALPKDRLYVTVY--------HTDDEAFDIWHKDIGLPQERIIAIGDNKGGAYQSDNFWMM 174
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARV-NADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
G TGPCG +EI YD L + D + IEIWN VF+ R T+ PL K
Sbjct: 175 GDTGPCGPCTEIFYDHGEHIWGGLPGTPDEDGDRYIEIWNCVFMQFNRQKDGTMQPLPKP 234
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
+DTG+G ER+ I+Q Y+TD+F L+ + G T + S +
Sbjct: 235 SVDTGMGLERISAIMQGVHGNYETDIFTKLMTKAVNIIG-------LPTDTDIQNEPSLK 287
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLVKELS 353
+L+D+ R + +AD + P + LR ++R A+ L + D F +L
Sbjct: 288 VLADHIRSVAFLIADGVIPSNEGRGYVLRRIIRRAVRHGNKLGATDAF-------FYQLV 340
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+ +A+I+GD YP+++ +KI+ +A +KE + KT
Sbjct: 341 HPLADIMGDAYPQLRHEQHKIE--------------QAILKEEEQFAKT----------- 375
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
L G+K L+++L ++G+ F LYDTYG ++ ++ K +T+ FE
Sbjct: 376 ---LSQGLKLLSQELDSLQQGDALAGETVFKLYDTYGFPADLTADIVREKGITIDEAGFE 432
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCLDT 529
+ E +R++A+ A K+ DYH D+ ++ + LD
Sbjct: 433 LSMAE--QRTRAREAG------------------KFAMDYHALIQVDSATEFLGYERLDN 472
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
D I + G ++D++ E + V LI DKT YA +GGQ+ ++G
Sbjct: 473 --------------DSTVIHLYQDGKAVDTLA-EGDEGV-LILDKTPFYAESGGQVGELG 516
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ E+G ++ + I+H G VV + ++ +V +++R + H
Sbjct: 517 -----EISTESGVFDVLDTQKSGQAIIHHG-VVKMGHINNNQSATAQVASQVRASSAKNH 570
Query: 650 TTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIAN 707
+ +HLL+AALR +L QK V SD DFS Y + L+ +++ +E +N ++AN
Sbjct: 571 SATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFS-YDKPLTEQNISQIETMVNQQILAN 629
Query: 708 Q------VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--SDKENV-ISREPCCG 758
+ +D + + + F GE Y D V ++ + +DK+ S E C G
Sbjct: 630 TPAHVEILDIDSAKNKGAMMLF--------GEKYGDTVRVLSMGTTDKDGKPFSIELCGG 681
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENG-KHLSTAAS 808
HV TG I ++ + + GVR I+ +TG + V+ G K L+ A+
Sbjct: 682 LHVTRTGDIGLFKIVSEQGISAGVRRIEAVTGMGAVNYVQQGDKQLNQLAN 732
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP+ D ++ F N+GM QFK+ FLGL Y R +SQKC+R GGKHNDL G + HHT
Sbjct: 31 IPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVRAVSSQKCVRAGGKHNDLDNVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K+DA A EFLT ++LP DRLY T
Sbjct: 91 FFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWLALPKDRLYVT 132
>gi|99081073|ref|YP_613227.1| alanyl-tRNA synthetase [Ruegeria sp. TM1040]
gi|99037353|gb|ABF63965.1| alanyl-tRNA synthetase [Ruegeria sp. TM1040]
Length = 902
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 250/813 (30%), Positives = 385/813 (47%), Gaps = 109/813 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FL+YF QGH +V SSP+VP D ++ F NSGM QFKN F G+ Y R +Q
Sbjct: 26 IRSTFLNYFAK-QGHEVVDSSPLVPRNDPTLMFTNSGMVQFKNCFTGVDRRDYVRATTAQ 84
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K +A A E +T +P D+
Sbjct: 85 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKNEAIPFAWELITG-EFDIPKDK 143
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHY 196
LY T + D+E +IW ++GVP + I + NFW+MG TGPCG +EI Y
Sbjct: 144 LYTTVY--------HTDDEAFEIWKKVGVPEERIIRIATSDNFWQMGDTGPCGPCTEIFY 195
Query: 197 D-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
D G P S D + IEIWN+VF+ ++R + ++V L IDTG+G ER
Sbjct: 196 DHGDHIWGGPPGSP----EEDGDRFIEIWNLVFMQNERFADGSMVDLDMQSIDTGMGLER 251
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
+ +LQ Y+TDLF L+E V+ ++PYG D + +R+++D+ R +
Sbjct: 252 IAALLQGTHDNYETDLFKYLIEASATVTKSEPYG---------DQNVHHRVIADHLRSCS 302
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
+A+ + P + LR ++R A+ + + ++ +L + +G YPE+
Sbjct: 303 FLIAEGVLPSNEGRGYVLRRIMRRAMRHASLLGATD--PVMHKLVPALVSQMGAAYPELG 360
Query: 369 DSINKIQLIL-GEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
I+ EE+R L + K L +LE+ +++
Sbjct: 361 QGQALIEETFEQEETRFLKTLDRG----LKLLDDASGDLEKGDVL--------------- 401
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
G+ AF LYDT+G ++ Q+ AK + + + F+ + KE+S+A
Sbjct: 402 ----------PGETAFKLYDTFGFPLDLTQDALRAKGIEVDTDGFDAAMKAQKEQSRAGG 451
Query: 488 ASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHA 547
I L D T+ K Y F +D +G + +
Sbjct: 452 ------IGLGDA-----------------TDVKVY-FDIVDAEGTTEFLGYETEKAEGQI 487
Query: 548 IRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGE 607
+ + GA +DS + + V +I ++T Y +GGQ+ D G+ T E G I +
Sbjct: 488 VALVKDGARVDSAKAGES--VQIILNQTPFYGESGGQVGDSGM-----LTVEGGAARITD 540
Query: 608 LASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CT 666
+EG +H V ++ G + +EVD R H+ +HLL+ ALR L
Sbjct: 541 TKKVEGLFLHIAEVTEG-EIAVGSGAAMEVDHVRRSQIRANHSATHLLHEALRNALGDHV 599
Query: 667 YQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTH 726
QK +D DFS + + +S + ++ + +ND I V R M + L
Sbjct: 600 AQKGSLNAADRLRFDFS-HNKAVSAEDLSKISAEVNDFIRQNSAVSTRIMTPDDARALGA 658
Query: 727 LTVIPGEIYPDDVILIDI--------SDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ GE Y ++V ++ + +D E S E C GTHV TG I + ++G +
Sbjct: 659 QALF-GEKYGEEVRVVSMGRAPTGKGADGE-TYSIELCGGTHVKQTGDIGTFVILGDSAS 716
Query: 779 NHGVRSIKCLTGDSSKAAVEN--GKHLSTAASF 809
+ GVR I+ LTG ++ A +E G+ AAS
Sbjct: 717 SAGVRRIEALTGAAAFAHLEREAGRMAEVAASL 749
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFKN F G+ Y R +QKC+R GGKHNDL G + HHT
Sbjct: 48 VPRNDPTLMFTNSGMVQFKNCFTGVDRRDYVRATTAQKCVRAGGKHNDLDNVGYTARHHT 107
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K +A A E +T +P D+LY T
Sbjct: 108 FFEMLGNFSFGDYFKNEAIPFAWELITG-EFDIPKDKLYTT 147
>gi|114775361|ref|ZP_01450929.1| alanyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
gi|114553472|gb|EAU55853.1| alanyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
Length = 871
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 256/805 (31%), Positives = 378/805 (46%), Gaps = 125/805 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FLDYF +GHT+V SS +VP+GD ++ F N+GM QFK+VFLG PY
Sbjct: 1 MRTSEIRKKFLDYFA-AEGHTIVDSSSLVPHGDPTLMFTNAGMVQFKHVFLGNESRPYRT 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
SQKCVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA R A +FLT
Sbjct: 60 ATTSQKCVRAGGKHNDLENVGHTARHHTFFEMLGNFSFGDYFKHDAIRYAWQFLTG---E 116
Query: 132 LPLD--RLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPC 188
L LD RL+ T F D+E DIW E+G+P D I + G K NFW MG TGPC
Sbjct: 117 LKLDPARLFITVF--------EEDDEAYDIWTKEVGIPADRIARIGAKDNFWSMGDTGPC 168
Query: 189 GYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYI 243
G SEI YD G P +A D + IEIWN+VF+ + R T+ PL +
Sbjct: 169 GPCSEIFYDHGADVWGGPPGTA----EEDGDRYIEIWNLVFMQYDRDEDGTLTPLPHPSV 224
Query: 244 DTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRML 303
DTG+G ER+ ++Q + YD DLF L++ ++G + + D S R+L
Sbjct: 225 DTGMGLERVAAVMQGVHNNYDIDLFARLIDAAGALTGVR-------MGDDPVSDVSLRVL 277
Query: 304 SDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVKELSYN 355
+D+ R ++ LAD + P + LR ++R A LL + F K LV L
Sbjct: 278 ADHLRSVSFLLADGVLPSNEGRGFVLRRILRRACRHGRLLGMYEAFIYK---LVDAL--- 331
Query: 356 IAEILGDVYPEIQDSINKI-QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
+AE +GD + E+++S I Q+I EE R L K
Sbjct: 332 VAE-MGDHFAELKESQGNIEQVIRIEEERFIKTLDK------------------------ 366
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
G+K + + A I G+ F LYDT+G ++ ++ ++L + FE+
Sbjct: 367 -----GLKLVEQAAASAGKGGTIPGETLFALYDTFGFPTDLTADILKGTDISLDMDGFER 421
Query: 475 KLNELKERSKA----KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
+ E + R++A S +P L +L+ ++H T Y +
Sbjct: 422 CMEEQRTRARAAWGGSGESALPKA-LFELR-----------EHHGPTEFLGYDTLSSEGV 469
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
+ G++ R G ++D++ W LI ++T YA +GGQ D G+
Sbjct: 470 ITGLI----------------RDGEAVDTLHAGEEGW--LIANQTPFYAESGGQAGDTGL 511
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ + E L VH G VV SF+ G VD R R H
Sbjct: 512 ITIGDAIFEVSDTR----KMLSDLFVHTGKVVKGSFEA--GSVVHFAVDEDRRAAIRRNH 565
Query: 650 TTSHLLNAALRRVLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +HL++A LR+VL +++ + +++ DF+ + + +S + +E +N I
Sbjct: 566 TATHLMHAVLRKVLGEHVKQAGSLVNEQRLRFDFNHF-KPVSEEERKVIEAEVNAAIWAN 624
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIE 768
V+ + M E + + GE Y D+V ++ S E C GTHV TG I
Sbjct: 625 DPVETKLMSQDE-AVASGAMALFGEKYGDEVRVVSAG-----FSTELCGGTHVSATGDIG 678
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSS 793
++ GVR I+ +TG ++
Sbjct: 679 PFRIVSEAGIAAGVRRIEAVTGSAA 703
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 69/103 (66%), Gaps = 5/103 (4%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+GD ++ F N+GM QFK+VFLG PY SQKC+R GGKHNDL G + HHT
Sbjct: 28 VPHGDPTLMFTNAGMVQFKHVFLGNESRPYRTATTSQKCVRAGGKHNDLENVGHTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLD--RLYFT 918
FFEMLGN+SF DY+K DA R A +FLT L LD RL+ T
Sbjct: 88 FFEMLGNFSFGDYFKHDAIRYAWQFLTG---ELKLDPARLFIT 127
>gi|282880930|ref|ZP_06289621.1| alanine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
gi|281305153|gb|EFA97222.1| alanine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
Length = 875
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 246/798 (30%), Positives = 379/798 (47%), Gaps = 105/798 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR SF +F ++GHT+V S+P+V D ++ F N+GM Q+K++ LG P PR
Sbjct: 4 MTANEIRESFKKFF-ESKGHTIVASAPMVIKDDPTLMFTNAGMNQWKDIILG-NKQPEPR 61
Query: 72 V-ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
A+SQKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+K A A E+L
Sbjct: 62 RRADSQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKEGAIDYAWEYLVGVLH 121
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
P D LY T F GS + +P D E W + +P DHI NFWEMG TGPCG
Sbjct: 122 LDPKD-LYVTVFEGSPEENIPHDSEAEKYWRK-HLPADHIINGNKHDNFWEMGDTGPCGP 179
Query: 191 SSEIHYDMKGEPSSAL----ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH D + + A VN D +IEIWNIVF+ R + ++ PLS N IDTG
Sbjct: 180 CSEIHVDSRSDEEKAQLPGRELVNKDHPQVIEIWNIVFMQFNRKADGSLEPLSMNVIDTG 239
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV +LQ K S YDTD+F P + +E++SG K YG + D+D + R+++D+
Sbjct: 240 MGFERLVRMLQGKNSNYDTDIFQPFIHEMERLSG-KKYG------EQEDVDVAMRVVADH 292
Query: 307 SRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R + ++AD P A +R ++R A+ + ++ + K L + E +G
Sbjct: 293 LRAVAFSIADGQLPSNAKAGYVIRRILRRAVRYAYTFLGQREAFVYKLLPVLVDE-MGGA 351
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
YPE+ I ++ EE F LR L G+
Sbjct: 352 YPELVAQRELIGKVMKEEEDSF--LRT--------------------------LEKGINL 383
Query: 424 LTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
L+ + + T+I G+ AF L+DTYG ++ + + ++ + F ++ K+
Sbjct: 384 LSNAMDELKKAGKTQIDGEQAFRLFDTYGFPLDLTELICREHGFSVDEQQFHAEMQ--KQ 441
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKY-KYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
+ +A+ A+ V + D ++++ + ++ YDY + C
Sbjct: 442 KDRARNAAQVENSDWVEIRQ---GEQQFVGYDY--------TEYEC-------------- 476
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
H +++ + + + N++ +I D T Y GGQ+ D GV E+
Sbjct: 477 -----HILKYRK-------VTQKKNSFYEVILDFTPFYGEMGGQVGDQGV-----LVSEH 519
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
V++ + + +H ++ P V+ R C HT +HLL+ AL+
Sbjct: 520 ETVDVIDTKRENNQSIH---IIKQLPQHPEADFMACVETDKRDACAANHTATHLLDYALK 576
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
+VL QK V D DFS + + ++ + + VE+ +ND+I + +D
Sbjct: 577 QVLGDHVEQKGSYVSPDTLRFDFSHF-QKVTDEEIRQVERLVNDLIRQDIPLDEHRDTPI 635
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
E + GE Y D V ++ S E C G H +TG I +I S
Sbjct: 636 EEAKEMGAVALFGEKYGDKVRVVRFGP-----SCEFCGGIHAKSTGRIGLFKIISESSVA 690
Query: 780 HGVRSIKCLTGDSSKAAV 797
GVR + +TG + A+
Sbjct: 691 AGVRRFEAITGRQCEEAM 708
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRV-ANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
D ++ F N+GM Q+K++ LG P PR A+SQKC+RV GKHNDL GRD+YHHT FE
Sbjct: 35 DPTLMFTNAGMNQWKDIILG-NKQPEPRRRADSQKCLRVSGKHNDLEEVGRDTYHHTMFE 93
Query: 881 MLGNWSFNDYYKRDACRMALEFLT 904
MLGNWSF DY+K A A E+L
Sbjct: 94 MLGNWSFGDYFKEGAIDYAWEYLV 117
>gi|416250160|ref|ZP_11637169.1| alanyl-tRNA synthetase [Moraxella catarrhalis CO72]
gi|326575283|gb|EGE25211.1| alanyl-tRNA synthetase [Moraxella catarrhalis CO72]
Length = 893
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 256/831 (30%), Positives = 401/831 (48%), Gaps = 136/831 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S +R +F+D+F + Q HT V SS ++P+ D ++ F N+GM QFK+ FLGL Y R
Sbjct: 4 MQSNEVRQAFIDFFVSKQ-HTHVPSSSLIPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
+SQKCVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA A EFLT +
Sbjct: 63 AVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWL 122
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEM 182
+LP DRLY T + D+E DIW ++G+P++ I G NFW M
Sbjct: 123 ALPKDRLYVTVY--------HTDDEAFDIWHKDIGLPQERIIAIGDNKGGAYQSDNFWMM 174
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARV-NADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
G TGPCG +EI YD L + D + IEIWN VF+ R T+ PL K
Sbjct: 175 GDTGPCGPCTEIFYDHGEHIWGGLPGTPDEDGDRYIEIWNCVFMQFNRQKDGTMQPLPKP 234
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
+DTG+G ER+ I+Q Y+TD+F L+ + G T + S +
Sbjct: 235 SVDTGMGLERISAIMQGVHGNYETDIFTKLMTKAVNIIG-------LPTDTDIQNEPSLK 287
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLVKELS 353
+L+D+ R + +AD + P + LR ++R A+ L + D F +L
Sbjct: 288 VLADHIRSVAFLIADGVIPSNEGRGYVLRRIIRRAVRHGNKLGATDAF-------FYQLV 340
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+ +A+I+GD YP+++ +KI+ +A +KE + KT
Sbjct: 341 HPLADIMGDAYPQLRHEQHKIE--------------QAILKEEEQFAKT----------- 375
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
L G+K L+++L ++G+ F LYDTYG ++ ++ K +T+ FE
Sbjct: 376 ---LSQGLKLLSQELDSLQQGDALAGETVFKLYDTYGFPADLTADIVREKGITIDEAGFE 432
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCLDT 529
+ E +R++A+ A K+ DYH D+ ++ + LD
Sbjct: 433 LSMAE--QRTRAREAG------------------KFAMDYHALIQVDSATEFLGYERLDN 472
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
D I + G ++D++ E + V LI DKT YA +GGQ+ ++G
Sbjct: 473 --------------DSTVIHLYQDGKAVDTLA-EGDEGV-LILDKTPFYAESGGQVGELG 516
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ E+G ++ + I+H G VV + ++ +V +++R + H
Sbjct: 517 -----EISTESGVFDVLDTQKSGQAIIHHG-VVKMGHINNNQSATAQVASQVRASSAKNH 570
Query: 650 TTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIAN 707
+ +HLL+AALR +L QK V SD DFS Y + L+ +++ +E +N ++AN
Sbjct: 571 SATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFS-YDKPLTEQNISQIEIMVNQQILAN 629
Query: 708 Q------VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--SDKENV-ISREPCCG 758
+ +D + + + F GE Y D V ++ + +DK+ S E C G
Sbjct: 630 TPAHVEILDIDSAKNKGAMMLF--------GEKYGDTVRVLSMGTTDKDGKPFSIELCGG 681
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENG-KHLSTAAS 808
HV TG I +I + + GVR I+ +TG + V+ G K L+ A+
Sbjct: 682 LHVTRTGDIGLFKIISEQGISAGVRRIEAVTGMGAVHYVQQGDKQLNQLAN 732
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP+ D ++ F N+GM QFK+ FLGL Y R +SQKC+R GGKHNDL G + HHT
Sbjct: 31 IPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVRAVSSQKCVRAGGKHNDLDNVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K+DA A EFLT ++LP DRLY T
Sbjct: 91 FFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWLALPKDRLYVT 132
>gi|89054478|ref|YP_509929.1| alanyl-tRNA synthetase [Jannaschia sp. CCS1]
gi|122498736|sp|Q28QV8.1|SYA_JANSC RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|88864027|gb|ABD54904.1| alanyl-tRNA synthetase [Jannaschia sp. CCS1]
Length = 884
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 252/795 (31%), Positives = 372/795 (46%), Gaps = 106/795 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FLDYF QGH +V SSP+VP D ++ FVNSGM QFKN+F G+ Y R +SQ
Sbjct: 7 IRSTFLDYFGR-QGHAVVPSSPLVPRNDPTLMFVNSGMVQFKNLFTGVEKRDYVRATSSQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA R A E +TK L R
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAIRYAWELITK-DFGLDKAR 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHY 196
LY T + D+E +IW ++GVP D I + NFW+MG TGPCG +EI Y
Sbjct: 125 LYVTVY--------HTDDEAFEIWKKVGVPEDRIIRIATSDNFWQMGPTGPCGPCTEIFY 176
Query: 197 D-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
D G P SA D + IEIWNIVF+ +++ + T+VPL IDTG+G ER
Sbjct: 177 DHGEHIWGGPPGSA----EEDGDRFIEIWNIVFMQNEQFADGTMVPLDMQSIDTGMGLER 232
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
+ +LQ YDTD L+E S +T D + +R+++D+ R +
Sbjct: 233 IGALLQGSHDNYDTDTMRALMEASAHAS---------STDLDGDQNVHHRVIADHLRSTS 283
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
+AD + P + LR ++R A+ + + K L+ L + +G Y E
Sbjct: 284 FLIADGVMPSNDGRGYVLRRIMRRAMRHAH-LLGAKD-PLMYRLVPALVSQMGQAYSE-- 339
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+ + Q ++ E ++ E E+F + GL K L ++
Sbjct: 340 --LGQAQALITETLKL--------------------EEERFRQTLDRGL----KLLDDEV 373
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAA 488
A+ P + G AF LYDTYG ++ Q+ + T+ + F+ + E +++KA+AA
Sbjct: 374 AKLPEDGNLPGAAAFKLYDTYGFPLDLTQDALREQGRTVDTDGFDAAMAE--QKAKARAA 431
Query: 489 SNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAI 548
+ D F + N V +G + +
Sbjct: 432 ----------------------WSGSGDAADATIWFDIAEKNGVTEFLGYDTEVAEGQVL 469
Query: 549 RHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGEL 608
GA +D + N V + ++T YA +GGQ+ D G E G + + E
Sbjct: 470 ALVVDGARVDKVA--SNQDVIFVTNQTPFYAESGGQVGDSGT-----IRTETGVLHVTET 522
Query: 609 ASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CT 666
+ G +H G V + KV G + V+ + R R C H+ +HLLN ALR +
Sbjct: 523 RKVAGVFLHVGQVTEGTIKVGQGASLSVDHE-RRRYICAN-HSATHLLNEALRWAIGDSV 580
Query: 667 YQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTH 726
Q+ D DFS + + ++ D +A VE +ND+I V+ R M + L
Sbjct: 581 VQRGSLNSRDRLRFDFS-HNKPMTADELAQVEAEVNDLITRNTAVETRVMTPDDARALGA 639
Query: 727 LTVIPGEIYPDDVILIDISD--------KENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ GE Y D+V ++ + ++ S E C GTHV TG I ++ +
Sbjct: 640 QALF-GEKYGDEVRVVSMGHHAGSGKGLDKDTYSIELCGGTHVKRTGDIGPFVILSESAS 698
Query: 779 NHGVRSIKCLTGDSS 793
GVR I+ LT ++
Sbjct: 699 AAGVRRIEALTNQTA 713
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ FVNSGM QFKN+F G+ Y R +SQKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFVNSGMVQFKNLFTGVEKRDYVRATSSQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA R A E +TK L RLY T
Sbjct: 89 FFEMLGNFSFGDYFKEDAIRYAWELITK-DFGLDKARLYVT 128
>gi|346992738|ref|ZP_08860810.1| alanyl-tRNA synthetase [Ruegeria sp. TW15]
Length = 889
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 263/844 (31%), Positives = 393/844 (46%), Gaps = 116/844 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FL+YF QGH +V SSP+VP D ++ FVNSGM QFKN+F G+ Y R +Q
Sbjct: 7 IRSTFLNYFAK-QGHEVVASSPLVPRNDPTLMFVNSGMVQFKNLFTGVETRDYHRATTAQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K +A A E +TK + +R
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKPEAIPFAWELITK-EFGIDKNR 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHY 196
L T + D+E +IW ++GVP D I + NFW+MG TGPCG +EI Y
Sbjct: 125 LLATVY--------HTDDEAFEIWKKVGVPEDRIIRIATNDNFWQMGPTGPCGPCTEIFY 176
Query: 197 D-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
D G P SA D + IEIWNIVF+ +++ ++V L IDTG+G ER
Sbjct: 177 DHGDHIWGGPPGSA----EEDGDRFIEIWNIVFMQNEQFEDGSMVELDMQSIDTGMGLER 232
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
+ +LQ YDTDLF L+E + +G PYG D + +R+++D+ R +
Sbjct: 233 IGALLQGSHDNYDTDLFKTLIEASAEATGVDPYG---------DQNVHHRVIADHLRSTS 283
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
+AD + P + LR ++R A+ A +LG P +
Sbjct: 284 FLIADGVMPSNDGRGYVLRRIMRRAM--------------------RHAHLLGAKDPVMH 323
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME----EPGLVLGVKYL 424
+ + ++G ++ L + QP +E+ ++E + L G+K L
Sbjct: 324 RLVPTLVQLMG--------------AQYTELGQAQPLIEETLLLEETRFKQTLDRGLKLL 369
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+++ + GD AF LYDTYG ++ Q+ K T+ + F+ + E K +++
Sbjct: 370 DDEVSGLSEGDPLPGDAAFKLYDTYGFPLDLTQDALREKGRTVDTDGFDVAMAEQKAKAR 429
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
A A + D + F V D D+ YDT L +
Sbjct: 430 AAWAGSGEAAD--QVVWFDVLDSAGATDFLGYDTEKAEGQVAAL--------------VV 473
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
D GA +DSI+ WV + ++T Y AGGQ+ D G + ++ +V
Sbjct: 474 D---------GALVDSIEKGGIGWV--VVNQTPFYGEAGGQVGDTGEIRRLDERKDVARV 522
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
+ + +GK+ V ++ G +EVD R H+ +HLL+ ALR L
Sbjct: 523 DDTRKFA-DGKVYAHKVTVEHGSISTGDAVELEVDHARRTAIRANHSATHLLHEALRETL 581
Query: 664 T-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
Q+ SD DFS + + L+ + + VE+ +N I V+ R M +
Sbjct: 582 GDHVAQRGSFNASDRLRFDFS-HSKALTREEIQKVEREVNAFIRQNSAVETRIMTPDDAR 640
Query: 723 FLTHLTVIPGEIYPDDVILIDIS--------DKENVISREPCCGTHVFNTGHIESCTVIG 774
L + GE Y D+V ++ + D E S E C GTHV TG I + ++G
Sbjct: 641 ALGAQALF-GEKYGDEVRVVSMGKAPTGKGQDGE-TWSIELCGGTHVRQTGDIGTFVLLG 698
Query: 775 YKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIPYGDDSIAFVNSGMCQ 834
+ + GVR I+ LTGD E HLS + + DD +A V S M +
Sbjct: 699 DSASSAGVRRIEALTGD------EAFNHLSAQDQRLGAIALELKAQPDDVVARVKSLMDE 752
Query: 835 FKNV 838
K++
Sbjct: 753 RKSL 756
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 60/88 (68%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ FVNSGM QFKN+F G+ Y R +QKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFVNSGMVQFKNLFTGVETRDYHRATTAQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTK 905
FFEMLGN+SF DY+K +A A E +TK
Sbjct: 89 FFEMLGNFSFGDYFKPEAIPFAWELITK 116
>gi|359441966|ref|ZP_09231850.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20429]
gi|358036227|dbj|GAA68099.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20429]
Length = 866
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 258/812 (31%), Positives = 382/812 (47%), Gaps = 118/812 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FLD+F + Q H +V SS ++P D ++ F N+GM QFK+VFLG PY R
Sbjct: 4 MTTAQIRQQFLDFFASKQ-HQIVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA + A EFLT+ VS
Sbjct: 63 ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVS 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L T + DEE + W ++G+ D I + NFW MG TGPCG
Sbjct: 122 LPKEKLLVTIY--------HDDEEAFEYWSKDIGLSEDRIIRIATSDNFWSMGDTGPCGP 173
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI YD G P S D + IEIWN+VF+ + R S T++PL K +DT
Sbjct: 174 CSEIFYDHGEHIWGGPPGSP----EEDGDRFIEIWNLVFMQYNRQSDGTMLPLPKQSVDT 229
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ILQ S Y+ DLF L+ V+ A+ D S R+++D
Sbjct: 230 GMGLERISAILQGVHSNYEIDLFQGLIAAAASVTNAQDMD-----------DKSLRVVAD 278
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R ++D + P + LR ++R A+ + QG +L + E +G
Sbjct: 279 HIRSCAFLISDGVMPSNEGRGYVLRRIIRRAVRHGNKLG--AQGSFFYKLVAALIEQMGQ 336
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ +L RI E EQF E GL + +
Sbjct: 337 AYPELAKQQEIIEKVL----RI--------------------EEEQFGKTLERGLAILEE 372
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L+ D I GD+ F LYDTYG ++ ++A +++T+ H+ FE+ + +R
Sbjct: 373 SLS-----DLKGDIIPGDLVFKLYDTYGFPADLTADVARERQMTIDHQGFEECM--AVQR 425
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT-FPCLD-TNLVGIVIGDQV 540
A+ A K+ DY+ S ++T F D T+ VI ++
Sbjct: 426 KTAQQAG------------------KFGADYNDQLKSDKHTDFKGYDSTHYSATVI--EI 465
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGL-IFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
F A +++QL + G+ + D+T YA +GGQ D G T
Sbjct: 466 F-------------AGGEAVQLLEDGQQGIVVLDRTPFYAESGGQTGDSG-----TITVA 507
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
G+ + L H G V V + + ++ D R R + HT +H+L+ AL
Sbjct: 508 GGEFNVTNTTKLGNAFAHHGTVQGRIGVNDKVDATID-DTR-RDSIKKNHTATHILHEAL 565
Query: 660 RRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R++L QK V D DFS + E ++ D + +E+ +ND I ++ M
Sbjct: 566 RQLLGDHVGQKGSLVQPDRLRFDFSHF-EAVTKDELREIERVVNDEIRRNFALNTELMAI 624
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ + + GE Y D+V ++ I D S E C GTHV G I ++
Sbjct: 625 DDAKAKGAMALF-GEKYDDEVRVVTIGD----YSIELCGGTHVERAGDIGLFKIVSESGI 679
Query: 779 NHGVRSIKCLTGDSSKAAV-ENGKHLSTAASF 809
GVR I+ +TG + A V E + LS A+
Sbjct: 680 AAGVRRIEAVTGADAVAYVSEQEQQLSDVAAL 711
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 31 IPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQRCVRAGGKHNDLENVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K+DA + A EFLT+ VSLP ++L T
Sbjct: 91 FFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVSLPKEKLLVTI 131
>gi|408372246|ref|ZP_11169988.1| alanyl-tRNA ligase [Galbibacter sp. ck-I2-15]
gi|407742316|gb|EKF53921.1| alanyl-tRNA ligase [Galbibacter sp. ck-I2-15]
Length = 873
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 249/803 (31%), Positives = 370/803 (46%), Gaps = 121/803 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FLD+F N + H +V S+P+V D ++ F N+GM QFK FLG R
Sbjct: 2 IKSRDIRKKFLDFF-NEKEHAIVPSAPMVIKDDPTLMFTNAGMNQFKEYFLGNKAPKSKR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V ++QKC+RV GKHNDL G+D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 61 VTDTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTE-VYG 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ D +Y T F GSD GLP D+E D W + V D I K NFWEMG GPCG S
Sbjct: 120 IDKDIIYVTVFEGSDSDGLPLDQEAYDFWKAI-VAEDRIILGNKKDNFWEMGDQGPCGPS 178
Query: 192 SEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ A + VN D ++EIWN+VFI R + + L++ ++DTG+
Sbjct: 179 SEIHVDIRSAEQRAEIPGASLVNMDHPQVVEIWNLVFIEFNRKADGALEKLAEQHVDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ KTS YDTD+F P++ IE ++ ++ YG T D + R+++D+
Sbjct: 239 GFERLSMVLQGKTSNYDTDVFTPIIREIETITSSE-YGVNEQT------DIAIRVIADHV 291
Query: 308 RMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + A+AD P T + + + F ++ + +L +++ + + +P
Sbjct: 292 RAVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLNQKEAFIYKLVDTLSKQMQEFFP 351
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ N I ++ EE F LR A GL+ L
Sbjct: 352 ELKKQKNIIYNVIKEEENSF--LRTLA----------------------QGLL-----LL 382
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ ++ +EI GD AF LYDT+G ++ + K TL E F+ L + K RS+A
Sbjct: 383 DTVIKENKGSEIPGDKAFELYDTFGFPIDLTALILQEKGYTLDQEGFKAALEKQKNRSRA 442
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
D +++ DD + YD ++ V
Sbjct: 443 ATKVETGDWEIL-------IDDPVEEFVGYD------------------LLKTPVKLTRY 477
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
+ + G L+F+ T YA GGQ+ D G + Y+ +T
Sbjct: 478 RKVESKKEGTMYQ-----------LVFNITPFYAEGGGQVGDKGYLQSSNGDLVYIVDTK 526
Query: 598 QENGKVEIGELASLEGKIVHFG-----NVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
+EN I+H N+ +F VD+ R H+ +
Sbjct: 527 KEN------------NLIIHLAKHLPENLYETFTAV--------VDSNQRERSSANHSAT 566
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL+ ALR VL QK V S DFS + + L+ + ++AV ++N I + +
Sbjct: 567 HLLHQALRSVLGDHVEQKGSMVRSGYLRFDFSHFSK-LTSEELSAVADFVNARIKEHLPL 625
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
+ L + GE Y D V I D S E C GTHV NT I
Sbjct: 626 EENRQTPYHLAIENGAMALFGEKYGDVVRTIKFGD-----SIELCGGTHVKNTRDIWHFI 680
Query: 772 VIGYKSYNHGVRSIKCLTGDSSK 794
+ + GVR I+ +T D+++
Sbjct: 681 ITSEGAVAAGVRRIEAITYDTAQ 703
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 59/84 (70%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG RV ++QKC+RV GKHNDL G+D+YHHT FEM
Sbjct: 33 DPTLMFTNAGMNQFKEYFLGNKAPKSKRVTDTQKCLRVSGKHNDLEEVGKDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTK 905
LGNWSF DY+K++A A E LT+
Sbjct: 93 LGNWSFGDYFKKEAISWAWELLTE 116
>gi|402847263|ref|ZP_10895560.1| alanine--tRNA ligase [Porphyromonas sp. oral taxon 279 str. F0450]
gi|402266739|gb|EJU16156.1| alanine--tRNA ligase [Porphyromonas sp. oral taxon 279 str. F0450]
Length = 878
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 247/794 (31%), Positives = 380/794 (47%), Gaps = 101/794 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ SK IR S+ +F ++GHT+V S+P+V GD ++ F N+GM QFK++ LG + R
Sbjct: 1 MTSKEIRESYKSFF-QSKGHTIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNAEIKHSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K +A A E+LT+ +
Sbjct: 60 VADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKHEAIDWAWEYLTEV-LH 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +RLY T F G+ GL D+E IW + +P + I NFWEMG GPCG
Sbjct: 119 LSPERLYVTVFEGAPAEGLERDDEAASIWAK-HLPAERIINGNKHDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + L VN +IEIWN+VF+ + R + ++ PL K IDTG+
Sbjct: 178 SEIHIDIRSDEERKAVDGLTLVNQSHPQVIEIWNLVFMQYNRKADGSLEPLPKRVIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +Q KTS YDTD+F P+++ I ++G + YG + D + R+++D+
Sbjct: 238 GFERLCMAMQGKTSNYDTDIFTPMIQAIATLTGIE-YGADQKS------DVAMRVIADHI 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I A+ D P A +R ++R A+ ++ + L I E +GD Y
Sbjct: 291 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGRREAFMYSLLPVLI-ETMGDAY 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ I ++ EE F LR L G++ L
Sbjct: 350 PELIAGRELIAKVMREEEESF--LRT--------------------------LETGIRLL 381
Query: 425 TKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
KQ+ A+ T + G AF LYDTYG ++ + + L++ F++ + E KER
Sbjct: 382 DKQIEEAKKAGKTVLDGHDAFVLYDTYGFPLDLTALILTEQGLSVDEAGFDKAMQEQKER 441
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
++ AA + D +++ D + V V D + C
Sbjct: 442 ARNAAAIDAGDWQVVN-----------------------------DGSAVRFVGYDTLEC 472
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
+ +R+ ++ ++ + ++ +T YA GGQ+ D G T+ T K
Sbjct: 473 TTE-ILRY-------REVKQKNATFYQVVLSETPFYAEMGGQVGDKGFLIATDGT----K 520
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
E+ + +H ++ T R VD R H+ +HLL+ ALR V
Sbjct: 521 YEVFDTKRENNLAIH---LMKKLPATLEGDFRAVVDEERRHRIEANHSATHLLHEALREV 577
Query: 663 LTCTYQKSCRVFSDEC-ALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR-RHMRASE 720
L ++ SDE DF+ + + + + + AVE+ + I + + R + E
Sbjct: 578 LGSHVEQKGSFVSDEVLRFDFAHFAK-VEPEQLRAVERIVTARIRACIPLQEYREVPIDE 636
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+ + + GE Y D V +I S E C GTHV +TG I + + S
Sbjct: 637 AREMGAMALF-GEKYGDHVRVIRFGS-----STEFCGGTHVASTGVIGTLRITSESSVAA 690
Query: 781 GVRSIKCLTGDSSK 794
GVR I+ +TG +++
Sbjct: 691 GVRRIEAVTGVAAE 704
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK++ LG + RVA+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 31 GDPTLMFTNAGMNQFKDIILGNAEIKHSRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 90
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K +A A E+LT+ + L +RLY T
Sbjct: 91 MLGNWSFGDYFKHEAIDWAWEYLTE-VLHLSPERLYVT 127
>gi|124514064|ref|XP_001350388.1| alanine--tRNA ligase, putative [Plasmodium falciparum 3D7]
gi|23615805|emb|CAD52797.1| alanine--tRNA ligase, putative [Plasmodium falciparum 3D7]
Length = 1408
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 256/867 (29%), Positives = 406/867 (46%), Gaps = 136/867 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP----- 66
+ ++ +R++F++YF + + HT+++SS +VPY D+++ F N+GM QFK +FLG
Sbjct: 389 MSAEEVRNNFINYF-HKKNHTIIESSSVVPYNDNTLLFTNAGMNQFKKIFLGNADKNSDL 447
Query: 67 APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R ++QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K ++ A + LT
Sbjct: 448 GKLKRAVDTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKEESISFAWDLLT 507
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGL-PCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
P DRLY TYFGG + P D ET+ IW++ + D I G+K NFWEM T
Sbjct: 508 NVYKINP-DRLYVTYFGGDENLSTCPADHETKKIWMKY-ISEDRILPFGLKENFWEMAET 565
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG SEIHYD G ++ + VN D ++EIWNIVF+ + + + L IDT
Sbjct: 566 GPCGPCSEIHYDRIGNRDAS-SLVNKDDPSVLEIWNIVFMQYNKDENKNMNKLPFPCIDT 624
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKP-YGRTFTTSNRTDLDTSYRMLS 304
G+G ER+ +ILQN S YDTDLF P+ + I+++ P Y + +DT+YR++S
Sbjct: 625 GMGLERITSILQNVDSNYDTDLFQPIFKQIKELFPYLPNYEGKINEQDVDKIDTAYRVIS 684
Query: 305 DYSRMITVALADNMFPDATAKLRNVVRDALL-----ISEDVFKVKQGKL-VKELSYNIAE 358
D+ R +TVA++D P RN V ++ + VF +K L +L ++
Sbjct: 685 DHIRCVTVAISDGCLPSNEG--RNYVIRRIIRRAIRFGKQVFNIKSNVLWFYKLVDSVCF 742
Query: 359 ILGDVYPEIQ--DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
ILG+ + ++Q D IN I+ + +E +F+ + V+++ ++K + F
Sbjct: 743 ILGNTFKDLQNPDKINFIKNTIKQEEMVFNKTLEKGVEQFHKIIKKNTKNNIF------- 795
Query: 417 LVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ-- 474
SG AF LY ++G ++IQ + K L + F
Sbjct: 796 ---------------------SGKDAFDLYTSFGFPIDLIQIMCEEKSFNLDLQEFNDLF 834
Query: 475 KLNELKERSKAKAASNVPDI------DLMDLKHFPVTDDKYKYDYHY----DTNSKRYTF 524
K ++L + + DI +L ++ + T D +KY+++ D ++K F
Sbjct: 835 KKHQLVSDTNNFKINKFFDIPVEKSHELKNVHNINPTVDHFKYEWNNNCANDGDNKDIKF 894
Query: 525 PCLDTNLVGIVIGDQVFCIDKHAIRHARSGASID---SIQLEHNAWVGLIFDKTNLYATA 581
V ++ F +D + ++ SI+ E+ LI +TN Y
Sbjct: 895 ETY----VQVIYDGNNF-LDNFTLPSNNDEQVLEKEKSIE-ENKKKYALILKETNFYYEN 948
Query: 582 GGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSF-KVTPGLTSRVEVDAR 640
GGQI D G+ +N K ++ + + ++H G + + + + V+ D R
Sbjct: 949 GGQIYDTGI-----IQNDNMKFQVLNVQKINEYVLHIGVFLKGYVSKNDKVQTIVDFDRR 1003
Query: 641 MRLGCMRAHTTSHLLNAALRRVLTCTY--------------------------------- 667
+ C HT +H+LN LR+VLT Y
Sbjct: 1004 KLVAC--NHTATHMLNFMLRKVLTEKYTNSGKSSKTHEGNNEKHEMSENDINSNNNYDNN 1061
Query: 668 ------------QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
QK V ++ DFS + E +++D++ +E IN +I ++ V +
Sbjct: 1062 KEEKGFSIFTCEQKGSLVDDEKLRFDFS-FIENINIDAITKIENEINKLIKEELNVTVKT 1120
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVI------------SREPCCGTHVFN 763
M E + + I E Y D V ++ I+ N I S E C GTH+ N
Sbjct: 1121 MDLDESKKIKGIRAIFEEDYADKVNVVFINKDVNNILNNMNIDYTYLHSIELCGGTHIGN 1180
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTG 790
T I V +S G+ I +T
Sbjct: 1181 TKLIRKFLVTSEESIGKGIYRITAVTN 1207
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 68/107 (63%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+PY D+++ F N+GM QFK +FLG R ++QKCIR GGKHNDL G+D
Sbjct: 416 VPYNDNTLLFTNAGMNQFKKIFLGNADKNSDLGKLKRAVDTQKCIRAGGKHNDLDDVGKD 475
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K ++ A + LT P DRLY T+
Sbjct: 476 VYHHTFFEMLGNWSFGDYFKEESISFAWDLLTNVYKINP-DRLYVTY 521
>gi|119472239|ref|ZP_01614418.1| alanyl-tRNA synthetase [Alteromonadales bacterium TW-7]
gi|119445057|gb|EAW26352.1| alanyl-tRNA synthetase [Alteromonadales bacterium TW-7]
Length = 866
Score = 342 bits (878), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 258/812 (31%), Positives = 384/812 (47%), Gaps = 118/812 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FLD+F + Q H +V SS ++P D ++ F N+GM QFK+VFLG PY R
Sbjct: 4 MTTAQIRQQFLDFFASKQ-HQVVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K++A + A EFLT+ V
Sbjct: 63 ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQEAIKFAWEFLTE-VVK 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L T + DEE + W ++G+ D I + NFW MG TGPCG
Sbjct: 122 LPQEKLLVTIY--------HDDEEAFEYWSKDIGLSEDRIIRIATSDNFWSMGDTGPCGP 173
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI YD G P S D + IEIWN+VF+ + R + T++PL K +DT
Sbjct: 174 CSEIFYDHGEHIWGGPPGSP----EEDGDRFIEIWNLVFMQYNRQNDGTMLPLPKQSVDT 229
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ILQ S Y+ DLF L+ V+ A+ D S R+++D
Sbjct: 230 GMGLERISAILQGVHSNYEIDLFQGLIAAAASVTNAQDMD-----------DKSLRVVAD 278
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R ++D + P + LR ++R A+ + QG +L + E +G
Sbjct: 279 HIRSCAFLISDGVMPSNEGRGYVLRRIIRRAVRHGNKLG--AQGAFFFKLVAALIEQMGQ 336
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ +L RI E EQF E GL +
Sbjct: 337 AYPELAKQQEIIEKVL----RI--------------------EEEQFGKTLERGLAI--- 369
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L + L+ D I GD+ F LYDTYG ++ ++A +++T+ H+ FE+ + +R
Sbjct: 370 -LEESLS-DLKGDVIPGDLVFKLYDTYGFPADLTADVARERQMTIDHKGFEECM--AVQR 425
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT-FPCLD-TNLVGIVIGDQV 540
A+ A K+ DY+ S ++T F D T+ V+ +V
Sbjct: 426 KTAQQAG------------------KFGADYNEQLKSDKHTDFKGYDSTHYSATVV--EV 465
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGL-IFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
F A +++QL + G+ I D+T YA +GGQ D G T
Sbjct: 466 F-------------AGGEAVQLLEDGQEGIVILDRTPFYAESGGQTGDTGT-----ITVA 507
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
G+ + L H G V V + + ++ DAR R + HT +H+L+ AL
Sbjct: 508 GGEFNVTNTTKLGNAFAHHGTVQGRIGVNDKVDATID-DAR-RENIKKNHTATHILHEAL 565
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R++L QK V +D DFS + E ++ D + +E+ +ND I ++ M
Sbjct: 566 RQLLGEHVSQKGSLVQADRLRFDFSHF-EAVTKDELRDIERVVNDEIRRNFALNTELMAI 624
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ + + GE Y D+V ++ I D S E C GTHV G I ++
Sbjct: 625 DDAKAKGAMALF-GEKYDDEVRVVTIGD----YSIELCGGTHVERAGDIGLFKIVSESGI 679
Query: 779 NHGVRSIKCLTGDSSKAAV-ENGKHLSTAASF 809
GVR I+ +TG + A V E + LS A+
Sbjct: 680 AAGVRRIEAVTGADAVAYVSEQEQQLSDVAAL 711
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 31 IPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQRCVRAGGKHNDLENVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K++A + A EFLT+ V LP ++L T
Sbjct: 91 FFEMLGNFSFGDYFKQEAIKFAWEFLTE-VVKLPQEKLLVTI 131
>gi|84998104|ref|XP_953773.1| alanyl-tRNA synthetase [Theileria annulata]
gi|65304770|emb|CAI73095.1| alanyl-tRNA synthetase, putative [Theileria annulata]
Length = 1024
Score = 342 bits (878), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 250/820 (30%), Positives = 403/820 (49%), Gaps = 119/820 (14%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPR 71
+R F+DYF ++ H SS ++P D ++ FVN+GM QFK++ +G +
Sbjct: 82 VRKQFIDYFV-SKNHVHWPSSSVLPNNDPTLLFVNAGMNQFKDIIMGKSDENSEFGKLKM 140
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V NSQKC+R GGKHNDL G+D YH T+FEMLGNWSF Y+K +A A + LT
Sbjct: 141 VCNSQKCIRAGGKHNDLDDVGQDCYHQTYFEMLGNWSFGAYFKEEAISYAWDLLTN-VYK 199
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L +RLY TYFGG D ETR+IWL+ +P I G K NFWEM TGPCG
Sbjct: 200 LDPNRLYVTYFGGDK--SCEVDNETREIWLKF-MPASRILPFGSKDNFWEMADTGPCGPC 256
Query: 192 SEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
+EIHYD + G +S L VNAD +++EIWNIVF+ + R + L K +DTG+G E
Sbjct: 257 TEIHYDHIGGRDASTL--VNADDPNVVEIWNIVFMQYNRGENGVLERLPKGCVDTGMGLE 314
Query: 251 RLVTILQNKTSTYDTDLFLPLLETI-EKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
RL ++L N S Y+TDL +++ I E + G + Y T LD +YR++SD+ R
Sbjct: 315 RLCSVLNNTNSNYNTDLLNDIIQYIRELLPGFESY-----KGGNTPLDVAYRVVSDHVRC 369
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
++VA++D ++P + LR ++R A+ D F K+ L K L ++ ++LG+ YP
Sbjct: 370 LSVAISDKVYPSNEGRGYVLRRILRRAVRYCRDYFNTKEPFLYK-LVPSVTKLLGNAYPN 428
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ I+ I+ +E ++F V+++K +V G K
Sbjct: 429 LLTEQANIESIVLDEEKLFLQTLDKGVEKFKKMVSKS----------------GNKV--- 469
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
I+G AF LY +YG ++ +A +T+ + + +L +++S+++
Sbjct: 470 ----------INGPDAFLLYQSYGFPLDLTMLMARELGITVDVDGYYSELKLHQQKSESR 519
Query: 487 AASNVPDID-----------------LMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLD 528
+++ ++ ++ + + TDDK KYD+ D +K Y
Sbjct: 520 VYTDLNSLESRCDKLLKSLSADRINTILKMCNNVYTDDKLKYDWDSSDPVAKVYK----- 574
Query: 529 TNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI 588
LV V D V + +Q + + V L+ D+T YA GGQI D
Sbjct: 575 AKLVSTVTLDSV----------------MSELQCDDDDLVCLVMDRTPFYAEGGGQIYDT 618
Query: 589 GVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA 648
G Y+ + +E+ + + G + HF S + G ++VD R+
Sbjct: 619 G--YIND-------LEVLRVYKMSGLVFHFCLSKKSGVLRCGDEFELKVDYERRVRVASN 669
Query: 649 HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
HT++H+LN LR +L +YQ+ ++ ++ D+ Y + L D + +E + D + +
Sbjct: 670 HTSTHILNFVLRDMLDESSYQRGSQLDEEKLKFDY-CYNQQLPEDLIRRIEDRMMDFVRS 728
Query: 708 QVQVDRRHMRASELPFLTHLTVIPG------EIYPDDVILIDIS-DKENV----ISREPC 756
+ +R E+ + L IPG E YP+ V ++++ E+ S E C
Sbjct: 729 EAP-----LRTREIEYKNALE-IPGIRANFDEKYPEVVRVVNVQLGSEDFSGEHTSTEVC 782
Query: 757 CGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAA 796
GTH+ NT I+ V+G + + GVR + +T + + +
Sbjct: 783 GGTHLTNTKTIQDVAVVGEEGISKGVRRLTLVTNEQCRKS 822
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ FVN+GM QFK++ +G + V NSQKCIR GGKHNDL G+D
Sbjct: 104 LPNNDPTLLFVNAGMNQFKDIIMGKSDENSEFGKLKMVCNSQKCIRAGGKHNDLDDVGQD 163
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YH T+FEMLGNWSF Y+K +A A + LT L +RLY T+
Sbjct: 164 CYHQTYFEMLGNWSFGAYFKEEAISYAWDLLTN-VYKLDPNRLYVTY 209
>gi|121998432|ref|YP_001003219.1| alanyl-tRNA synthetase [Halorhodospira halophila SL1]
gi|205830063|sp|A1WXK5.1|SYA_HALHL RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|121589837|gb|ABM62417.1| alanyl-tRNA synthetase [Halorhodospira halophila SL1]
Length = 863
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 254/809 (31%), Positives = 381/809 (47%), Gaps = 129/809 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S +R++FLD+F +GH +V SSP+VP D ++ F N+GM FK VFLG Y R
Sbjct: 1 MTSAQLRAAFLDFF-RERGHEVVPSSPLVPANDPTLLFTNAGMVPFKEVFLGREQRGYQR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+KRDA R A FLT+ V
Sbjct: 60 ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIRYAWSFLTE-VVE 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RL+ T + D+E IWL E+GV ++ G NFW MG TGPCG
Sbjct: 119 LPPERLWVTVY--------EDDDEAAQIWLEEIGVDPARFRRIGAHDNFWSMGDTGPCGP 170
Query: 191 SSEIHYDMKGEPSSALARVNADRND-LIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
SE+ YD E + + D IE+WN+VF+ + R + + PL IDTG+G
Sbjct: 171 CSEVFYDHGPEVPGGPPGSDEEDGDRYIEVWNLVFMQYDRDAEGNLNPLPSPSIDTGMGL 230
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERL +LQ ++TDLF PL++ +++G S+R S ++++D+ R
Sbjct: 231 ERLAAVLQGVHDNFETDLFTPLIDAAGEIAG---------VSDRR--KPSLKVVADHIRA 279
Query: 310 ITVALADNMFPDATAK---LRNVVRDA------LLISEDVFKVKQGKLVKELSYNIAEIL 360
+ + D + P + LR ++R A L I E F +LV L ++
Sbjct: 280 CSFLIVDGVLPSTEGRGYVLRRIIRRAVRHGYQLGIDEPFFY----RLVDPLDA----VM 331
Query: 361 GDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
G+ +PE++D ++ IL +E + +F E GL L
Sbjct: 332 GEAFPELRDRREFVEKILFQEEK------------------------RFRETLEDGLALL 367
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
+YL D + I G++ F LYDT+G ++ ++A + L + ++ FE ++ E +
Sbjct: 368 DEYLG---GNDSGV--IDGEVVFKLYDTHGFPVDLTADIARERNLEVDYQGFEARMAEQR 422
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT-FPCLDTNLVGIVIGDQ 539
ER++A + +++ D R+T + L+ VG VIG
Sbjct: 423 ERARAASRFGGAREEVV------------------DAGESRFTGYETLED--VGSVIG-- 460
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI------GVAYL 593
+ G S+ +Q V + D+T YA +GGQ+ D G+ +
Sbjct: 461 ----------LYQDGRSVQRLQPGEEGMV--VLDRTPFYAESGGQVGDRGEILANGLRFR 508
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
T + G+ G L LE + G+ V++ VD R +R H+ +H
Sbjct: 509 VADTVKQGEAH-GHLGRLESGELGVGDQVTA-----------RVDRGTREATVRNHSATH 556
Query: 654 LLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
LL+AALR +L QK V D DFS Y E S + + +E +N I V+
Sbjct: 557 LLHAALREILGDHVQQKGSLVAPDRLRFDFSHY-EAPSREDLERIEARVNQEILTNHPVE 615
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
HM A E + GE Y D V +I + D S+E C GTH TG I +
Sbjct: 616 AAHM-AYEEAVQVGAMALFGEKYGDTVRVISLGD----YSQELCGGTHAARTGDIGLFKI 670
Query: 773 IGYKSYNHGVRSIKCLTGDSSKAAVENGK 801
I GVR I+ +TG+ + V+ +
Sbjct: 671 IDETGVAGGVRRIEAITGERAIGWVQEAE 699
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM FK VFLG Y R +SQ+C+R GGKHNDL G + HHT
Sbjct: 28 VPANDPTLLFTNAGMVPFKEVFLGREQRGYQRATSSQRCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA R A FLT+ V LP +RL+ T
Sbjct: 88 FFEMLGNFSFGDYFKRDAIRYAWSFLTE-VVELPPERLWVT 127
>gi|258648967|ref|ZP_05736436.1| alanine--tRNA ligase [Prevotella tannerae ATCC 51259]
gi|260850577|gb|EEX70446.1| alanine--tRNA ligase [Prevotella tannerae ATCC 51259]
Length = 874
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 251/783 (32%), Positives = 372/783 (47%), Gaps = 99/783 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR SF +F ++GH +V S+P+V D ++ F N+GM QFK++ LG R
Sbjct: 1 MTANEIRESFKRFF-ESKGHLIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGHREPKSRR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+K +A A E+L
Sbjct: 60 QTDSQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKEEAIEFAYEYLVGVLKI 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P + LY T F GS GL D+E IW P DHI NFWEMG TGPCG
Sbjct: 120 DPAN-LYVTVFEGSPDEGLSRDDEAAAIWGR-HFPEDHIINGNKHDNFWEMGETGPCGPC 177
Query: 192 SEIHYDMK-GEPSSALAR---VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E +A+A +N D +IEIWN+VF+ + R + T+ L + IDTG+
Sbjct: 178 SEIHIDIRSAEEKAAVAGRELINKDHPQVIEIWNLVFMQYNRKADGTLDALPQRVIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL ++Q K S YDTD+F P+L I ++SG + YG + T+ D + R+++D+
Sbjct: 238 GFERLCMVMQGKQSNYDTDVFRPILNKIAELSGRR-YGES------TETDIAMRVIADHL 290
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R I+ ++AD P A +R ++R A+ + K+ + + L + E +G+ Y
Sbjct: 291 RAISFSIADGQLPSNAKAGYVIRRILRRAVRYAYTFLDQKEAFMYR-LVPTLVEEMGEAY 349
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ + I ++ EE F LR A L+ GV
Sbjct: 350 PELAAQRDLITRVMKEEEDSF--LRTLATG--------------------ISLLEGVMKE 387
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
TK D + + G+ AFTL+DTYG ++ + + A L + + F ++ KER++
Sbjct: 388 TK----DGGSSVVKGEKAFTLFDTYGFPLDLTELICAENGLKVDEDGFNVEMQRQKERAR 443
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
+ A+ D + + + + +DT + C
Sbjct: 444 SAASVETGD--------WVILSEGESHFVGWDTLRQ----AC------------------ 473
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
H +R+ + +Q + + L+ D T YA GGQ+ D GV N T VE
Sbjct: 474 -HILRYRK-------VQQKKQTYYELVIDTTPFYAEMGGQVGDSGVLRSANET-----VE 520
Query: 605 IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT 664
I + +H + P EVD R C H+ +HLL+ ALR VL
Sbjct: 521 IFDTKQENNLSIH---LTKRLPENPAAEFMAEVDEAARRSCEANHSATHLLDQALREVLG 577
Query: 665 C-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRHMRASELP 722
QK V D S Y + ++ + + VE+ IN I + + D R + E
Sbjct: 578 AHVEQKGSLVTPTYLRFDLSHY-QKVTPEELRQVERIINRRIREDIPLQDHRDVPIEEAK 636
Query: 723 FLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGV 782
+ + + GE Y D V ++ DK S E C G HV +TG I ++ S G+
Sbjct: 637 RMGAIALF-GEKYGDRVRVVQF-DK----SVEFCGGCHVRSTGRIGLFRIVSESSVAAGI 690
Query: 783 RSI 785
R I
Sbjct: 691 RRI 693
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 57/83 (68%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG R +SQKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDIILGHREPKSRRQTDSQKCLRVSGKHNDLEEVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLT 904
LGNWSF DY+K +A A E+L
Sbjct: 92 LGNWSFGDYFKEEAIEFAYEYLV 114
>gi|451981574|ref|ZP_21929926.1| Alanyl-tRNA synthetase [Nitrospina gracilis 3/211]
gi|451761247|emb|CCQ91190.1| Alanyl-tRNA synthetase [Nitrospina gracilis 3/211]
Length = 879
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 250/812 (30%), Positives = 386/812 (47%), Gaps = 123/812 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ IR FL YF + +GHT+V S +VP D S+ F N+GM QFKNVFLG Y R
Sbjct: 1 MTGNEIRHLFLKYFED-RGHTVVPSDALVPKNDPSLLFTNAGMVQFKNVFLGQEKRDYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A+SQKCVR GGKHNDL GR + HHTFFEMLGN+SF DY+K++A A EFLT+ V
Sbjct: 60 AASSQKCVRAGGKHNDLEMVGRTARHHTFFEMLGNFSFGDYFKKEAIAYAWEFLTE-IVK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP D+LY + + DE+ IW ++G+ D I + G + NFW MG+TGPCG
Sbjct: 119 LPKDKLYISIY--------KDDEDAFQIWKNDIGLADDRIYRLGEEDNFWAMGNTGPCGP 170
Query: 191 SSEIHYDMK-----GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI+ D G+P+ A V D + +EIWN+VF+ + R A + PL IDT
Sbjct: 171 CSEIYIDQGEALGCGKPTCA---VGCDCDRYLEIWNLVFMQYDRDEAGNMEPLPSPCIDT 227
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ERL +LQ + S YD+D+ + L++ K++G KPY + D S R+++D
Sbjct: 228 GMGLERLAAVLQGQPSNYDSDIMMGLIQHAAKITG-KPYNASHEN------DVSLRVIAD 280
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKE-------LSYN 355
++R T + D + P + LR ++R AL + GKL+ + ++ +
Sbjct: 281 HARAATFLINDGVLPSNEGRGYVLRRIMRRAL---------RHGKLLDQEKPFFHHITED 331
Query: 356 IAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
+ E DVY +++ + IQ ++ E F+N
Sbjct: 332 VIEKFQDVYADLKTNREFIQKVVTNEEVSFNNT--------------------------- 364
Query: 416 GLVLGVKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
L G + L + L R + T I G+ F LYDT+G ++++E A L F+
Sbjct: 365 -LTFGTERLNEILDRLRQENKTTIPGEEVFKLYDTFGFPVDLVEETAKDTGFELDMSGFD 423
Query: 474 QKLNELKERS----KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
+ + E +E++ K + I ++ T +D + T + L
Sbjct: 424 RAMKEQREKAMASWKGSGEKQIAPIYTKIVQEHGGT----LFDGYGGTEGEGRVLALLK- 478
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
D+ + A G I+ L+ D+T Y +GGQ+ DIG
Sbjct: 479 --------------DQKPVESAGEGDEIE-----------LVLDETPFYGESGGQVGDIG 513
Query: 590 VAYLTNTTQENGKVEIGELAS-LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA 648
A+ + G++E+ + L IVH V V+ G ++VDAR R+
Sbjct: 514 WAF-----HDRGRLEVTDTQKPLNNLIVHKAKVTQG-TVSKGDALNLQVDARKRIDTANN 567
Query: 649 HTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
H+ +HLL+AAL+ VL Q V +D D++ + L+ + +E +N+ I
Sbjct: 568 HSATHLLHAALKEVLGPHVKQAGSLVEADRLRFDYTHF-SPLTEEERERIEALVNEQIRA 626
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHI 767
+V+ + + + E + GE Y D V ++++ S+E C GTHV TG I
Sbjct: 627 NHEVETK-VVSMEDALEEGAVALFGEKYDDHVRVVNVPG----FSKELCGGTHVPATGTI 681
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN 799
+ GVR I+ +TG + ++N
Sbjct: 682 GFFKITHEGGIASGVRRIEAVTGSRAYEWLQN 713
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D S+ F N+GM QFKNVFLG Y R A+SQKC+R GGKHNDL GR + HHT
Sbjct: 28 VPKNDPSLLFTNAGMVQFKNVFLGQEKRDYTRAASSQKCVRAGGKHNDLEMVGRTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K++A A EFLT+ V LP D+LY +
Sbjct: 88 FFEMLGNFSFGDYFKKEAIAYAWEFLTE-IVKLPKDKLYISI 128
>gi|416217209|ref|ZP_11624158.1| alanyl-tRNA synthetase [Moraxella catarrhalis 7169]
gi|326561060|gb|EGE11425.1| alanyl-tRNA synthetase [Moraxella catarrhalis 7169]
Length = 893
Score = 342 bits (877), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 256/831 (30%), Positives = 401/831 (48%), Gaps = 136/831 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S +R +F+D+F + Q HT V SS ++P+ D ++ F N+GM QFK+ FLGL Y R
Sbjct: 4 MQSNEVRQAFIDFFVSKQ-HTHVPSSSLIPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
+SQKCVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA A EFLT +
Sbjct: 63 AVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWL 122
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEM 182
+LP DRLY T + D+E DIW ++G+P++ I G NFW M
Sbjct: 123 ALPKDRLYVTVY--------HTDDEAFDIWHKDIGLPQERIIAIGDNKGGAYQSDNFWMM 174
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARV-NADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
G TGPCG +EI YD L + D + IEIWN VF+ R T+ PL K
Sbjct: 175 GDTGPCGPCTEIFYDHGEHIWGGLPGTPDEDGDRYIEIWNCVFMQFNRQKDGTMQPLPKP 234
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
+DTG+G ER+ I+Q Y+TD+F L+ + G T + S +
Sbjct: 235 SVDTGMGLERISAIMQGVHGNYETDIFTKLMTKAVNIIG-------LPTDTDIQNEPSLK 287
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLVKELS 353
+L+D+ R + +AD + P + LR ++R A+ L + D F +L
Sbjct: 288 VLADHIRSVAFLIADGVIPSNEGRGYVLRRIIRRAVRHGNKLGATDAF-------FYQLV 340
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+ +A+I+GD YP+++ +KI+ +A +KE + KT
Sbjct: 341 HPLADIMGDAYPQLRHEQHKIE--------------QAILKEEEQFAKT----------- 375
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
L G+K L+++L ++G+ F LYDTYG ++ ++ K +T+ FE
Sbjct: 376 ---LSQGLKLLSQELDSLQQGDVLAGETVFKLYDTYGFPADLTADIVREKGITIDEAGFE 432
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCLDT 529
+ E +R++A+ A K+ DYH D+ ++ + LD
Sbjct: 433 LSMAE--QRTRAREAG------------------KFAMDYHALIQVDSATEFLGYERLDN 472
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
D I + G ++D++ E + V LI DKT YA +GGQ+ ++G
Sbjct: 473 --------------DSTVIHLYQDGKAVDTLA-EGDEGV-LILDKTPFYAESGGQVGELG 516
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ E+G ++ + I+H G VV + ++ +V +++R + H
Sbjct: 517 -----EISTESGVFDVLDTQKSGQAIIHHG-VVKMGHINNNQSATAQVASQVRASSAKNH 570
Query: 650 TTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIAN 707
+ +HLL+AALR +L QK V SD DFS Y + L+ +++ +E +N ++AN
Sbjct: 571 SATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFS-YDKPLTEQNISQIEIMVNQQILAN 629
Query: 708 Q------VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--SDKENV-ISREPCCG 758
+ +D + + + F GE Y D V ++ + +DK+ S E C G
Sbjct: 630 TPAHVEILDIDSAKNKGAMMLF--------GEKYGDTVRVLSMGTTDKDGKPFSIELCGG 681
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENG-KHLSTAAS 808
HV TG I +I + + GVR I+ +TG + V+ G K L+ A+
Sbjct: 682 LHVTRTGDIGLFKIISEQGISAGVRRIEAVTGMGAVNYVQQGDKQLNQLAN 732
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP+ D ++ F N+GM QFK+ FLGL Y R +SQKC+R GGKHNDL G + HHT
Sbjct: 31 IPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVRAVSSQKCVRAGGKHNDLDNVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K+DA A EFLT ++LP DRLY T
Sbjct: 91 FFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWLALPKDRLYVT 132
>gi|260433747|ref|ZP_05787718.1| alanyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
gi|260417575|gb|EEX10834.1| alanyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
Length = 890
Score = 342 bits (877), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 245/794 (30%), Positives = 370/794 (46%), Gaps = 100/794 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FL+YF QGH +V SSP+VP D ++ FVNSGM QFKN+F GL Y R +Q
Sbjct: 7 IRSTFLNYFAK-QGHEVVASSPLVPRNDPTLMFVNSGMVQFKNLFTGLETRDYKRATTAQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA A E +TK + +R
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAIPFAWELITK-EFGIDKNR 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHY 196
L T + D+E +IW ++GVP D I + NFW+MG TGPCG +EI Y
Sbjct: 125 LLTTVY--------HTDDEAFEIWKKVGVPEDRIIRIATSDNFWQMGPTGPCGPCTEIFY 176
Query: 197 D-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
D G P SA D + IEIWNIVF+ +++ ++ L IDTG+G ER
Sbjct: 177 DHGDHIWGGPPGSA----EEDGDRFIEIWNIVFMQNEQFEDGSMRELDMQSIDTGMGLER 232
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
+ +LQ YDTDLF L+E + PYG D + +R+++D+ R +
Sbjct: 233 IGALLQGSHDNYDTDLFKTLIEASADATNVDPYG---------DQNVHHRVIADHLRSTS 283
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
+AD + P + LR ++R A+ A +LG P +
Sbjct: 284 FLIADGVMPSNDGRGYVLRRIMRRAM--------------------RHAHLLGAEDPVMH 323
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
+ + ++G + + L +A + L+ + +Q L G+K L +++
Sbjct: 324 RLVPTLVQLMGAQ---YSELGRAQALIEETLLLEETRFKQT-------LDRGLKLLDEEV 373
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAA 488
A P + G+ AF LYDTYG ++ Q+ K T+ E F+ + E K +++A A
Sbjct: 374 AGLPDDAPLPGEAAFKLYDTYGFPLDLTQDALREKGRTVDTEGFDAAMAEQKAKARAAWA 433
Query: 489 SNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAI 548
+ D + F LD +G + + +
Sbjct: 434 GSGEAAD------------------------QAVWFDVLDAAGATDFLGYETEKAEGQVL 469
Query: 549 RHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGEL 608
R GA ++ ++ + W+ + ++T Y AGGQ+ D GV E VE +
Sbjct: 470 AVIRDGALVEKLEPGESGWI--VSNQTPFYGEAGGQVGDTGVIRRLEDRDEVALVEDTKK 527
Query: 609 ASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTY 667
+ + K++ V G +EVD R H+ +HLL+ ALR L
Sbjct: 528 FA-DAKVIAHKVTVERGVFAKGEPVELEVDHARRSAIRANHSATHLLHEALRETLGEHVA 586
Query: 668 QKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHL 727
Q+ +D DFS + + ++ + + VE+ +N I V+ R M + L
Sbjct: 587 QRGSLNAADRLRFDFS-HTKAMTPEEIETVEREVNAFIRQNSPVETRIMTPDDARKLGAQ 645
Query: 728 TVIPGEIYPDDVILIDIS--------DKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
+ GE Y D+V ++ + D E S E C GTHV TG I + ++G + +
Sbjct: 646 ALF-GEKYGDEVRVVSMGKAPTGKGHDGE-TWSIELCGGTHVRQTGDIGTFVILGDSASS 703
Query: 780 HGVRSIKCLTGDSS 793
GVR I+ LTGD++
Sbjct: 704 AGVRRIEALTGDAA 717
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 60/88 (68%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ FVNSGM QFKN+F GL Y R +QKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFVNSGMVQFKNLFTGLETRDYKRATTAQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTK 905
FFEMLGN+SF DY+K DA A E +TK
Sbjct: 89 FFEMLGNFSFGDYFKEDAIPFAWELITK 116
>gi|416241873|ref|ZP_11633007.1| alanyl-tRNA synthetase [Moraxella catarrhalis BC7]
gi|326571434|gb|EGE21449.1| alanyl-tRNA synthetase [Moraxella catarrhalis BC7]
Length = 893
Score = 342 bits (877), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 256/831 (30%), Positives = 401/831 (48%), Gaps = 136/831 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S +R +F+D+F + Q HT V SS ++P+ D ++ F N+GM QFK+ FLGL Y R
Sbjct: 4 MQSNEVRQAFIDFFVSKQ-HTHVPSSSLIPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
+SQKCVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA A EFLT +
Sbjct: 63 AVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWL 122
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEM 182
+LP DRLY T + D+E DIW ++G+P++ I G NFW M
Sbjct: 123 ALPKDRLYVTVY--------HTDDEAFDIWHKDIGLPQERIIAIGDNKGGAYQSDNFWMM 174
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARV-NADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
G TGPCG +EI YD L + D + IEIWN VF+ R T+ PL K
Sbjct: 175 GDTGPCGPCTEIFYDHGEHIWGGLPGTPDEDGDRYIEIWNCVFMQFNRQKDGTMQPLPKP 234
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
+DTG+G ER+ I+Q Y+TD+F L+ + G T + S +
Sbjct: 235 SVDTGMGLERISAIMQGVHGNYETDIFTKLMTKAVNIIG-------LPTDTDIQNEPSLK 287
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLVKELS 353
+L+D+ R + +AD + P + LR ++R A+ L + D F +L
Sbjct: 288 VLADHIRSVAFLIADGVIPSNEGRGYVLRRIIRRAVRHGNKLGATDAF-------FYQLV 340
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+ +A+I+GD YP+++ +KI+ +A +KE + KT
Sbjct: 341 HPLADIMGDAYPQLRHEQHKIE--------------QAILKEEEQFAKT----------- 375
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
L G+K L+++L ++G+ F LYDTYG ++ ++ K +T+ FE
Sbjct: 376 ---LSQGLKLLSQELDSLQQGDVLAGETVFKLYDTYGFPADLTADIVREKGITIDEAGFE 432
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCLDT 529
+ E +R++A+ A K+ DYH D+ ++ + LD
Sbjct: 433 LSMAE--QRTRAREAG------------------KFAMDYHALIQVDSATEFLGYERLDN 472
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
D I + G ++D++ E + V LI DKT YA +GGQ+ ++G
Sbjct: 473 --------------DSTVIHLYQDGKAVDTLA-EGDEGV-LILDKTPFYAESGGQVGELG 516
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ E+G ++ + I+H G VV + ++ +V +++R + H
Sbjct: 517 -----EISTESGVFDVLDTQKSGQAIIHHG-VVKMGHINNNQSATAQVASQVRASSAKNH 570
Query: 650 TTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIAN 707
+ +HLL+AALR +L QK V SD DFS Y + L+ +++ +E +N ++AN
Sbjct: 571 SATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFS-YDKPLTEQNISQIEIMVNQQILAN 629
Query: 708 Q------VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--SDKENV-ISREPCCG 758
+ +D + + + F GE Y D V ++ + +DK+ S E C G
Sbjct: 630 TPAHVEILDIDSAKNKGAMMLF--------GEKYGDTVRVLSMGTTDKDGKPFSIELCGG 681
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENG-KHLSTAAS 808
HV TG I +I + + GVR I+ +TG + V+ G K L+ A+
Sbjct: 682 LHVTRTGDIGLFKIISEQGISAGVRRIEAVTGMGAVNYVQQGDKQLNQLAN 732
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP+ D ++ F N+GM QFK+ FLGL Y R +SQKC+R GGKHNDL G + HHT
Sbjct: 31 IPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVRAVSSQKCVRAGGKHNDLDNVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K+DA A EFLT ++LP DRLY T
Sbjct: 91 FFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWLALPKDRLYVT 132
>gi|345866496|ref|ZP_08818523.1| alanyl-tRNA synthetase [Bizionia argentinensis JUB59]
gi|344049074|gb|EGV44671.1| alanyl-tRNA synthetase [Bizionia argentinensis JUB59]
Length = 883
Score = 342 bits (876), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 243/806 (30%), Positives = 379/806 (47%), Gaps = 113/806 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR+ FL +F + + H++V S+P+V D ++ FVNSGM FK FLG R
Sbjct: 1 MKSQDIRAKFLQFFKD-KNHSIVPSAPMVLKNDPTLMFVNSGMAPFKEYFLGNAVPKNNR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ +SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 LTDSQKCLRVSGKHNDLEEVGYDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLTEE-FG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ D LY T F G + G+P D+E D W EL + D I K NFWEMG GPCG
Sbjct: 119 VDKDILYVTVFEGDEGDGIPMDQEAYDFWKEL-ISEDRILMGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ A VN D ++EIWN+VF+ + R + ++ L +IDTG+
Sbjct: 178 SEIHVDIRSAEEKAEVPGKDLVNLDHPQVVEIWNLVFMQYNRKANGSLEALPNKHIDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPY--------GRTFTTSNRTDLDTS 299
GFERL +LQN S YDTD+F P++ IE ++ K Y G + + + ++ +
Sbjct: 238 GFERLCMVLQNVKSNYDTDVFTPIIREIETITD-KEYIPLVGTSRGLSEKETEQEKINVA 296
Query: 300 YRMLSDYSRMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIA 357
R++SD+ R + ++AD P T + + + F ++ + L ++
Sbjct: 297 IRVISDHVRAVAFSIADGQLPSNTGAGYVIRRILRRAIRYSFTFLDQKEPFIYRLVDVLS 356
Query: 358 EILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+ +GD +PE+ I+ ++ EE F + ++K+
Sbjct: 357 KKMGDAFPELISQKQLIENVIKEEEASFLRTLDQGLLLLDGIIKS--------------- 401
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
S +SG+ AF LYDTYG ++ + + ++L L F++ L
Sbjct: 402 --------------TSGDTVSGEKAFELYDTYGFPIDLTALILSEQELKLDETGFKEHLE 447
Query: 478 ELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG 537
+ K+RS+A + + D ++ +D + YDT L+ N+
Sbjct: 448 KQKKRSRAASEMSTDDWTIL-------FEDSVQEFIGYDT---------LEANV------ 485
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-------- 589
R+ + + D A L+F+ T YA GGQ+ D G
Sbjct: 486 --------KIARYRKVTSKKDG------AMYQLVFNLTPFYAEGGGQVGDKGYLEDANGD 531
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ Y+ +T +EN V +HF + +T ++ V+ R R C H
Sbjct: 532 ITYILDTKKENNVV------------MHFAKELPE-NITDTFSATVDSKQRFRTEC--NH 576
Query: 650 TTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +HLL+ ALR VL + QK V S DFS + + L+V+ + VE ++N IA +
Sbjct: 577 TATHLLHQALREVLGSHVEQKGSAVHSKYLRFDFSHFSK-LTVEELRDVELFVNARIAGK 635
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIE 768
+++ + + + GE Y D V ++ S E C GTHV NTG I
Sbjct: 636 LELQEQRNMPMDKAIEAGAMALFGEKYGDTVRMVRFGQ-----SIELCGGTHVKNTGDIW 690
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSK 794
+ + G+R I+ +T D+ K
Sbjct: 691 FFKITSEGAVASGIRRIEAITNDALK 716
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ FVNSGM FK FLG R+ +SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFVNSGMAPFKEYFLGNAVPKNNRLTDSQKCLRVSGKHNDLEEVGYDTYHHTLFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ + D LY T
Sbjct: 92 LGNWSFGDYFKKEAIAWAWELLTE-EFGVDKDILYVT 127
>gi|416239331|ref|ZP_11631881.1| alanyl-tRNA synthetase [Moraxella catarrhalis BC1]
gi|326567519|gb|EGE17634.1| alanyl-tRNA synthetase [Moraxella catarrhalis BC1]
Length = 893
Score = 342 bits (876), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 255/831 (30%), Positives = 401/831 (48%), Gaps = 136/831 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S +R +F+D+F + Q HT V SS ++P+ D ++ F N+GM QFK+ FLGL Y R
Sbjct: 4 MQSNEVRQAFIDFFVSKQ-HTHVPSSSLIPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
+SQKCVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA A EFLT +
Sbjct: 63 AVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWL 122
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEM 182
+LP DRLY T + D+E DIW ++G+P++ I G NFW M
Sbjct: 123 ALPKDRLYVTVY--------HTDDEAFDIWHKDIGLPQERIIAIGDNKGGAYQSDNFWMM 174
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARV-NADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
G TGPCG +EI YD L + D + IEIWN VF+ R T+ PL K
Sbjct: 175 GDTGPCGPCTEIFYDHGEHIWGGLPGTPDEDGDRYIEIWNCVFMQFNRQKDGTMQPLPKP 234
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
+DTG+G ER+ I+Q Y+TD+F L+ + G T + S +
Sbjct: 235 SVDTGMGLERISAIMQGVHGNYETDIFTKLMTKAVNIIG-------LPTDTDIQNEPSLK 287
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLVKELS 353
+L+D+ R + +AD + P + LR ++R A+ L + D F +L
Sbjct: 288 VLADHIRSVAFLIADGVIPSNEGRGYVLRRIIRRAVRHGNKLGATDAF-------FYQLV 340
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+ +A+I+GD YP+++ +KI+ +A +KE + KT
Sbjct: 341 HPLADIMGDAYPQLRHEQHKIE--------------QAILKEEEQFAKT----------- 375
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
L G+K L+++L ++G+ F LYDTYG ++ ++ K +T+ FE
Sbjct: 376 ---LSQGLKLLSQELDSLQQGDALAGETVFKLYDTYGFPADLTADIVREKGITIDEAGFE 432
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCLDT 529
+ E +R++A+ A K+ DYH D+ ++ + LD
Sbjct: 433 LSMAE--QRTRAREAG------------------KFAMDYHALIQVDSATEFLGYERLDN 472
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
D I + G ++D++ E + V LI DKT YA +GGQ+ ++G
Sbjct: 473 --------------DSTVIHLYQDGKAVDTLA-EGDEGV-LILDKTPFYAESGGQVGELG 516
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ E+G ++ + I+H G VV + ++ +V +++R + H
Sbjct: 517 -----EISTESGVFDVLDTQKSGQAIIHHG-VVKMGHINNNQSATAQVASQVRASSAKNH 570
Query: 650 TTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIAN 707
+ +HLL+AALR +L QK V SD DFS Y + L+ +++ +E +N ++AN
Sbjct: 571 SATHLLHAALRTILGDGVSQKGSMVSSDLLRFDFS-YDKPLTEQNISQIEIMVNQQILAN 629
Query: 708 Q------VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--SDKENV-ISREPCCG 758
+ +D + + + F GE Y D V ++ + +DK+ S E C G
Sbjct: 630 TPAHVEILDIDSAKNKGAMMLF--------GEKYGDTVRVLSMGTTDKDGKPFSIELCGG 681
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENG-KHLSTAAS 808
HV TG I ++ + + GVR I+ +TG + V+ G K L+ A+
Sbjct: 682 LHVTRTGDIGLFKIVSEQGISAGVRRIEAVTGMGAVHYVQQGDKQLNQLAN 732
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP+ D ++ F N+GM QFK+ FLGL Y R +SQKC+R GGKHNDL G + HHT
Sbjct: 31 IPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVRAVSSQKCVRAGGKHNDLDNVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K+DA A EFLT ++LP DRLY T
Sbjct: 91 FFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWLALPKDRLYVT 132
>gi|325285608|ref|YP_004261398.1| alanyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
gi|324321062|gb|ADY28527.1| alanyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
Length = 871
Score = 342 bits (876), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 246/804 (30%), Positives = 374/804 (46%), Gaps = 122/804 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IRS FL++F N + H +V S+P+V D ++ F N+GM QFK FLG T A R
Sbjct: 1 MKSQEIRSQFLEFFKN-KTHKIVSSAPMVIKDDPTLMFTNAGMNQFKEFFLGNTEAKNTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V ++QKC+RV GKHNDL G+D+YHHT FEMLGNWSF DY+K DA A E LTK
Sbjct: 60 VVDTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKEDAISWAWELLTK-VFK 118
Query: 132 LPLDRLYFTYFGGS-DQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+ LY T F GS D+ L D+E D+W ++ +P I K NFWEMG GPCG
Sbjct: 119 IDESSLYVTVFEGSKDKDNLEMDQEALDLWKKI-IPESQILFGNKKDNFWEMGDQGPCGP 177
Query: 191 SSEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH D++ A VN D ++EIWN+VF+ + R + + L ++DTG
Sbjct: 178 CSEIHVDIRSAEEKAKVSGAELVNMDHPQVVEIWNLVFMQYNRKANGELENLPAKHVDTG 237
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERL ++Q S YDTD+F P++ IE ++ A+ Y + D + + R+++D+
Sbjct: 238 MGFERLCMVMQGVQSNYDTDVFTPIIREIETITNAE-YNKN------EDTNIAIRVIADH 290
Query: 307 SRMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R + ++AD P T + + + F + + L + +GD +
Sbjct: 291 IRAVAFSIADGQLPSNTGAGYVIRRILRRAIRYGFTFLNTKEPFMYRLVNVLTNTMGDAF 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+++ I+ ++ EE F +KT L+Q GLV L
Sbjct: 351 PELKEQKQLIENVVKEEEHSF--------------LKT---LDQ-------GLV-----L 381
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ S I G AF LYDTYG ++ + + + TL + F+ + E K RS+
Sbjct: 382 LDSVINSASSKTIDGRKAFELYDTYGFPIDLTALILSERGYTLDEKGFDAAMQEQKNRSR 441
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
+ + + D +++ D + + L+TN+
Sbjct: 442 SASEVSKEDWEVL----------------LQDAEQEFVGYDVLETNV------------- 472
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNT 596
+++ + + + Q + L+F+ T YA GGQ+ D G V Y+ +T
Sbjct: 473 -RLVKYRKVTSKKEGKQYQ------LVFNITPFYAEGGGQVGDKGYLEAQNGDVVYILDT 525
Query: 597 TQENGKVEIGELASLEGKIVHFG-----NVVSSFKVTPGLTSRVEVDARMRLGCMRAHTT 651
+EN +I+HF N FK VD + R HT
Sbjct: 526 KKEN------------NEIIHFAKNLPKNTTDIFKAV--------VDVKQRQRTASNHTA 565
Query: 652 SHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ 710
+HLL+ ALR VL T QK V S DFS + + ++ + + VE ++N I +
Sbjct: 566 THLLHQALREVLGTHVEQKGSAVHSKYLRFDFSHFSK-VTTEQLKEVEDFVNARIEGNLP 624
Query: 711 VDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESC 770
++ + + + GE Y D V LI S E C GTHV NTG I
Sbjct: 625 LEEKRNIPMQEALDAGAMALFGEKYGDTVRLIRFGQ-----SVELCGGTHVQNTGDIWHF 679
Query: 771 TVIGYKSYNHGVRSIKCLTGDSSK 794
+ + G+R I+ +T D+ K
Sbjct: 680 KIKSEGAVASGIRRIEAITSDAVK 703
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 60/84 (71%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG T A RV ++QKC+RV GKHNDL G+D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEFFLGNTEAKNTRVVDTQKCLRVSGKHNDLEEVGKDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTK 905
LGNWSF DY+K DA A E LTK
Sbjct: 92 LGNWSFGDYFKEDAISWAWELLTK 115
>gi|149236429|ref|XP_001524092.1| alanyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
gi|146452468|gb|EDK46724.1| alanyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
Length = 436
Score = 342 bits (876), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 168/383 (43%), Positives = 241/383 (62%), Gaps = 10/383 (2%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP---- 66
+ + ++RS+FLDYF + + HT V SS +VP+ D ++ F N+GM Q+K +FLG
Sbjct: 21 KWTASTVRSTFLDYFKSKRDHTYVPSSSVVPHNDPTLLFANAGMNQYKPIFLGTVDPSSD 80
Query: 67 -APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFL 125
A R ANSQKC+R GGKHNDL GRDSYHHTFFEMLGNWSF DY+K++A + E L
Sbjct: 81 FAKLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIGWSWELL 140
Query: 126 TKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGST 185
T+ L DRLY TYF G ++ GL D E ++ WL +GV DHI K NFWEMG
Sbjct: 141 TEV-YGLEKDRLYVTYFEGDEKQGLEPDMEAKNFWLSVGVAEDHILPGNAKDNFWEMGDQ 199
Query: 186 GPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
GPCG SEIHYD G ++A + VN D +++E+WNIVFI + R S ++ PL +IDT
Sbjct: 200 GPCGPCSEIHYDRIGGRNAA-SLVNMDDPNVLEVWNIVFIQYNRESDGSLRPLPSKHIDT 258
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV++LQNK+S YDTD+FLP+ + I +++G +PY F + ++ +DT+YR+++D
Sbjct: 259 GMGFERLVSVLQNKSSNYDTDVFLPIFDKIREITGVRPYTGKFGSEDKDGIDTAYRVIAD 318
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R +T A+ D P+ + LR ++R G ++L + E +
Sbjct: 319 HVRTLTFAICDGGVPNNEGRGYVLRRILRRGSRYVRKYMNYPIGSFFQQLVDVVIEQNKE 378
Query: 363 VYPEIQDSINKIQLILGEESRIF 385
++PE++ + ++ IL EE F
Sbjct: 379 IFPELERGVADLKEILNEEELSF 401
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM Q+K +FLG A R ANSQKCIR GGKHNDL GRD
Sbjct: 50 VPHNDPTLLFANAGMNQYKPIFLGTVDPSSDFAKLKRAANSQKCIRAGGKHNDLEDVGRD 109
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
SYHHTFFEMLGNWSF DY+K++A + E LT+ L DRLY T+
Sbjct: 110 SYHHTFFEMLGNWSFGDYFKKEAIGWSWELLTE-VYGLEKDRLYVTY 155
>gi|86142096|ref|ZP_01060620.1| alanyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
gi|85831659|gb|EAQ50115.1| alanyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
Length = 849
Score = 341 bits (875), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 252/778 (32%), Positives = 367/778 (47%), Gaps = 122/778 (15%)
Query: 36 SSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCVRVGGKHNDLSCAGRDS 95
S+P+V D ++ F N+GM QFK FLG RV ++QKC+RV GKHNDL G+D+
Sbjct: 3 SAPMVIKNDPTLMFTNAGMNQFKEFFLGNGTPKDTRVTDTQKCLRVSGKHNDLEEVGKDT 62
Query: 96 YHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEE 155
YHHT FEMLGNWSF DY+K+DA A E LT+ + ++LY T F G D GL D E
Sbjct: 63 YHHTMFEMLGNWSFGDYFKQDAIDWAWELLTE-VYKIDKNKLYVTIFEGDDSEGLERDAE 121
Query: 156 TRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHYDMKGEPSSA----LARVNA 211
D+W + V D I K NFWEMG GPCG SEIH D++ E A VNA
Sbjct: 122 AYDMW-KKHVAEDRILNGNKKDNFWEMGDQGPCGPCSEIHVDLRSEEEKAKTPGAELVNA 180
Query: 212 DRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPL 271
D ++EIWN+VFI R + ++ L +IDTG+GFERL +LQ+KTS YDTD+F PL
Sbjct: 181 DHPQVVEIWNLVFIQFNRKADGSLENLPARHIDTGMGFERLCMVLQDKTSNYDTDVFTPL 240
Query: 272 LETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRN 328
+ IE ++ +K YG++ T D + R+++D+ R + ++AD P T +R
Sbjct: 241 IREIETIAHSK-YGQSEET------DIAIRVIADHVRAVAFSIADGQLPSNTGAGYVIRR 293
Query: 329 VVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNL 388
++R A+ K+ + K +S + E + +PE++ N I ++ EE + F L
Sbjct: 294 ILRRAVRYGFTFLNTKEPFIYKLVSVLVDE-MSKAFPELKKQQNLIFNVIKEEEQSF--L 350
Query: 389 RKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDT 448
R L+Q GLVL + + + E+SG AF LYDT
Sbjct: 351 RT---------------LDQ-------GLVLLDSIIAETKGK-----EVSGAKAFELYDT 383
Query: 449 YGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDK 508
YG ++ + + K TL +AF+ +L + K+RS+A D + V +D
Sbjct: 384 YGFPIDLTALILSEKGYTLDEKAFQTELQKQKDRSRAAGKIEAGDWTI-------VEEDS 436
Query: 509 YKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWV 568
+ YDT + V I + G D Q
Sbjct: 437 EEEFVGYDT------------------LQTPVRITRYRKINTKKEG---DQYQ------- 468
Query: 569 GLIFDKTNLYATAGGQIDDIG--------VAYLTNTTQENGKVEIGELASLEGKIVHFG- 619
L+F+ T YA GGQ+ D G V Y+T+T +EN I+H
Sbjct: 469 -LVFNLTPFYAEGGGQVGDKGYLEAANGDVVYITDTKKEN------------NLIIHLSK 515
Query: 620 ----NVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVF 674
N+ +F VDA+ R H+ +HLL+ ALR VL T QK V
Sbjct: 516 NLPKNLNETFTAV--------VDAKQRHRTQANHSATHLLHQALRAVLGTHVEQKGSMVH 567
Query: 675 SDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEI 734
S DFS + + ++ + + +E+++N I Q+ ++ + + + GE
Sbjct: 568 SGYLRFDFSHFSK-VTAEELKDIEQFVNARIQEQLPLEEQRAIPYDQAIAEGAIALFGEK 626
Query: 735 YPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDS 792
Y D V I S E C GTH NT I + + G+R I+ +TGD+
Sbjct: 627 YGDAVRTIRFGK-----SMELCGGTHAENTADIWYFKIKSESAVASGIRRIEAITGDA 679
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG RV ++QKC+RV GKHNDL G+D+YHHT FEM
Sbjct: 11 DPTLMFTNAGMNQFKEFFLGNGTPKDTRVTDTQKCLRVSGKHNDLEEVGKDTYHHTMFEM 70
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K+DA A E LT+ + ++LY T
Sbjct: 71 LGNWSFGDYFKQDAIDWAWELLTE-VYKIDKNKLYVT 106
>gi|322421559|ref|YP_004200782.1| alanyl-tRNA synthetase [Geobacter sp. M18]
gi|320127946|gb|ADW15506.1| alanyl-tRNA synthetase [Geobacter sp. M18]
Length = 875
Score = 341 bits (875), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 256/808 (31%), Positives = 381/808 (47%), Gaps = 119/808 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ K IR+ F ++F +GHTLV+SS ++P D ++ F N+GM QFK+ FLGL Y R
Sbjct: 1 MTGKEIRAQFFNFF-QKKGHTLVESSNLIPKNDPTLLFTNAGMNQFKDTFLGLEKRDYVR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQKCVR GGKHNDL GR + HHTFFEMLGN+SF DY+K++A A EFLT +
Sbjct: 60 AVSSQKCVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIGFAWEFLT-VELG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
L DRLY T + D+E DIW + GVPR+ I + G K NFW MG TGPCG
Sbjct: 119 LSSDRLYVTVY--------TDDDEAADIWHQQEGVPRERIYRFGEKDNFWSMGDTGPCGP 170
Query: 191 SSEIHYDMK-----GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
+EI +D G P+ A V D + +EIWN VF+ R T+ PL K +DT
Sbjct: 171 CTEIFWDNGPGTGCGSPACA---VGCDCDRYMEIWNNVFMQFNRSKDGTLTPLPKPSVDT 227
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ++Q TS YDTDL ++ IE+VSG K + D D S R+++D
Sbjct: 228 GMGLERISAVMQGVTSNYDTDLLQGIIRHIEQVSGKK------YRDDEKD-DVSMRVIAD 280
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAE---- 358
++R +T + D + P + LR ++R A K + + + Y + +
Sbjct: 281 HARAVTFLICDGVLPSNEGRGYVLRRIMRRA------ARHAKMLGIAEPVLYRVVDAVNV 334
Query: 359 ILGDVYPEIQDSINKI-QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
++G+ YPE+ + + + ++IL EE R + L + GL
Sbjct: 335 MMGEAYPELLEREHYVKKVILAEEERFIETLDR-------------------------GL 369
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF----E 473
+ + A+ S+ ISG++ F LYDT+G ++ ++ A+ TL + F E
Sbjct: 370 AILNEETAAMKAKGASV--ISGEVIFKLYDTFGFPVDLTADIVEAEGFTLDEDGFALCME 427
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
++ + +E K + DI +L+ + + Y +++ + + + G
Sbjct: 428 KQRVKARENWKGSGEQGLADI-YKELRGTGIASEFVGY-------AEQTAYSTISAIIKG 479
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
V+ + +G I+ ++ KT Y +GGQ D G
Sbjct: 480 GVL-----------VEEGNAGDEIE-----------IVTAKTPFYGESGGQAGDTG---- 513
Query: 594 TNTTQENGKVEIGELAS---LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
T G + AS IVH G VVS + G ++V R R HT
Sbjct: 514 ---TISTGSAHVEVTASTRPFPDLIVHRGKVVSG-NIRNGEAVDLKVATAHRAATARNHT 569
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+HLL AALR VL Q V D DF+ + ++ + + VE +N I
Sbjct: 570 ATHLLQAALREVLGEHVKQAGSLVTPDRLRFDFTHF-SPMTAEEMRRVEVLVNGHIMGNS 628
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIES 769
VD R M A+E T + GE Y D V ++ + D +S E C GTHV G I
Sbjct: 629 PVDAREMPATE-ALAGGATALFGEKYGDIVRVVRVGD----VSSELCGGTHVHGAGEIGF 683
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
++ GVR I+ TG+ + A V
Sbjct: 684 FKILSEAGIAAGVRRIEAQTGNGALAVV 711
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+ FLGL Y R +SQKC+R GGKHNDL GR + HHT
Sbjct: 28 IPKNDPTLLFTNAGMNQFKDTFLGLEKRDYVRAVSSQKCVRAGGKHNDLENVGRTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K++A A EFLT + L DRLY T
Sbjct: 88 FFEMLGNFSFGDYFKKEAIGFAWEFLT-VELGLSSDRLYVT 127
>gi|296112817|ref|YP_003626755.1| alanyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|295920511|gb|ADG60862.1| alanyl-tRNA synthetase [Moraxella catarrhalis BBH18]
Length = 893
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 255/831 (30%), Positives = 399/831 (48%), Gaps = 136/831 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S +R +F+D+F + Q HT V SS ++P+ D ++ F N+GM QFK+ FLGL Y R
Sbjct: 4 MQSNEVRQAFIDFFVSKQ-HTHVPSSSLIPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
+SQKCVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA A EFLT +
Sbjct: 63 AVSSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWL 122
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEM 182
+LP DRLY T + D+E DIW ++G+P++ I G NFW M
Sbjct: 123 ALPKDRLYVTVY--------HTDDEAFDIWHKDIGLPQERIIAIGDNKGGAYQSDNFWMM 174
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARV-NADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
G TGPCG +EI YD L + D + IEIWN VF+ R T+ PL K
Sbjct: 175 GDTGPCGPCTEIFYDHGEHIWGGLPGTPDEDGDRYIEIWNCVFMQFNRQKDGTMQPLPKP 234
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
+DTG+G ER+ I+Q Y+TD+F L+ + G T + S +
Sbjct: 235 SVDTGMGLERISAIMQGVHGNYETDIFTKLMTKAVNIIG-------LPTDTDIQNEPSLK 287
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLVKELS 353
+L+D+ R + +AD + P + LR ++R A+ L + D F +L
Sbjct: 288 VLADHIRSVAFLIADGVIPSNEGRGYVLRRIIRRAVRHGNKLGATDAF-------FYQLV 340
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+ +A+I+GD YP+++ +KI+ +A +KE + KT
Sbjct: 341 HPLADIMGDAYPQLRHEQHKIE--------------QAILKEEEQFAKT----------- 375
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
L G+K L+++L ++G+ F LYDTYG ++ ++ K +T+ FE
Sbjct: 376 ---LSQGLKLLSQELDSLQQGDALAGETVFKLYDTYGFPADLTADIVREKGITIDEAGFE 432
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCLDT 529
+ E +R++A+ A K+ DYH D+ ++ + LD
Sbjct: 433 LSMAE--QRTRAREAG------------------KFAMDYHALIQVDSATEFLGYERLDN 472
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
D I + G ++D++ E + V LI DKT YA +GGQ+ ++G
Sbjct: 473 --------------DSTVIHLYQDGKAVDTLA-EGDEGV-LILDKTPFYAESGGQVGELG 516
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ E+G ++ + I+H G VV + ++ +V +++R + H
Sbjct: 517 -----EISTESGVFDVLDTQKSGQAIIHHG-VVKMGHINNNQSATAQVASQVRASSAKNH 570
Query: 650 TTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIAN 707
+ +HLL+AALR +L QK V D DFS Y + L+ ++ +E +N ++AN
Sbjct: 571 SATHLLHAALRTILGDGVSQKGSMVSGDLLRFDFS-YDKPLTEQNINQIETMVNQQILAN 629
Query: 708 Q------VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--SDKENV-ISREPCCG 758
+ +D + + + F GE Y D V ++ + +DK+ S E C G
Sbjct: 630 TPAHVEILDIDSAKNKGAMMLF--------GEKYGDTVRVLSMGTTDKDGKPFSIELCGG 681
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENG-KHLSTAAS 808
HV TG I +I + + GVR I+ +TG + V+ G K L+ A+
Sbjct: 682 LHVTRTGDIGLFKIISEQGISAGVRRIEAVTGMGAVHYVQQGDKQLNQLAN 732
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP+ D ++ F N+GM QFK+ FLGL Y R +SQKC+R GGKHNDL G + HHT
Sbjct: 31 IPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVRAVSSQKCVRAGGKHNDLDNVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K+DA A EFLT ++LP DRLY T
Sbjct: 91 FFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWLALPKDRLYVT 132
>gi|449329230|gb|AGE95503.1| alanyl tRNA synthethase [Encephalitozoon cuniculi]
Length = 864
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 254/810 (31%), Positives = 393/810 (48%), Gaps = 107/810 (13%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
++ +R SFL+YF ++ H +V SS +VPY DD++ F NSGM QFK LG R
Sbjct: 5 TEKLRQSFLNYFA-SKSHKIVNSSSVVPYEDDTLLFTNSGMVQFKKNLLG-EKKDLRRAC 62
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
+ Q+C+R GGKHNDL G+D+YHHT+FEM+GNWSF DY+K + A EFL + + L
Sbjct: 63 SVQRCIRAGGKHNDLDDVGKDTYHHTYFEMMGNWSFGDYFKEEGIGFAWEFLVEV-LKLD 121
Query: 134 LDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSE 193
DRLY TY+ D+E+ IW + +P I K NFWEMG TGPCG +E
Sbjct: 122 TDRLYVTYYD-------ELDKESGKIWRKY-LPPSRIIAASYKDNFWEMGDTGPCGPCTE 173
Query: 194 IHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLV 253
IHYD G A VN D ++IEIWNIVFI + R ++ +VPL + IDTG+G ERL+
Sbjct: 174 IHYDRIG-SRDASRLVNKDDPNVIEIWNIVFIEYNRTTS-GLVPLERKCIDTGIGLERLL 231
Query: 254 TILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVA 313
+IL + S Y D F +++ +E K + +T D ++R+++D+ R I V
Sbjct: 232 SILMDVKSNYLIDSFSTIIKAMESHCSFKYKDKAEST------DVAFRVVADHCRTIAVC 285
Query: 314 LADNM-FPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDS 370
+ D + F + LR ++R A+ + +V +K+G ++ EL A +G + E +
Sbjct: 286 VYDKVDFSNDGVGYVLRRILRRAVRYAHEVLGLKEG-VLGELVVVAAHAIG-IELESVEC 343
Query: 371 INKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLAR 430
+NK +L+ L+K +E+FN + E
Sbjct: 344 VNKEELLF------MRTLKKG--------------IERFNRLAE---------------- 367
Query: 431 DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASN 490
S +ISG+ F LYDTYG ++ + +A + + + + FE E SK +
Sbjct: 368 --SSNKISGEDLFLLYDTYGFPVDLTELMAVERNIEIDYTNFESCRQRAIEASKKSKGTK 425
Query: 491 VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRH 550
+ +ID+ FP TDD +KY+ + S + F V G+ V
Sbjct: 426 L-NIDIGMCSKFPPTDDSFKYER--NGVSAMFLFA---------VAGEDVIT-------- 465
Query: 551 ARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELAS 610
+ ++ +G++FDKT YA GGQ+ D G + + + G + + +
Sbjct: 466 -------EPCKIPKGIELGIVFDKTCFYAECGGQVGDTGKIIFRDDSGDTGVFNVTDTQA 518
Query: 611 LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQKS 670
+ G +VH G + S + D +R MR HT +HLLN LR V+ T Q+
Sbjct: 519 ILGFVVHKGALDGS----ASHQALQMYDYELRRRIMRNHTGTHLLNFFLRTVIK-TQQRG 573
Query: 671 CRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-----DRRHMRASELPFLT 725
V D+ DF G L+ + + VE+ IND I +V DRR +A + P
Sbjct: 574 SLVDPDKLRFDFE--GRKLTNEELEDVERKINDFIKKDAEVKAVILDRR--QAMDNP--- 626
Query: 726 HLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSI 785
++ + E YP++V +I + + +I +E C GTHV N I ++ + R I
Sbjct: 627 NIVRMQNEEYPENVRIITMQ-SDGLIIQEMCGGTHVTNVSDIGKFRIVSETGVSANTRRI 685
Query: 786 KCLTGDSSKAAVENGKHLSTAASFSQILNV 815
+TG + + S +++NV
Sbjct: 686 VGVTGKKAHELDAEAELCLRKLSMGKVVNV 715
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 74/115 (64%), Gaps = 3/115 (2%)
Query: 806 AASFSQILNVGNI-PYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHN 864
A+ +I+N ++ PY DD++ F NSGM QFK LG R + Q+CIR GGKHN
Sbjct: 17 ASKSHKIVNSSSVVPYEDDTLLFTNSGMVQFKKNLLG-EKKDLRRACSVQRCIRAGGKHN 75
Query: 865 DLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
DL G+D+YHHT+FEM+GNWSF DY+K + A EFL + + L DRLY T+
Sbjct: 76 DLDDVGKDTYHHTYFEMMGNWSFGDYFKEEGIGFAWEFLVE-VLKLDTDRLYVTY 129
>gi|359455991|ref|ZP_09245195.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20495]
gi|358046962|dbj|GAA81444.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20495]
Length = 866
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 253/811 (31%), Positives = 377/811 (46%), Gaps = 116/811 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FLD+F + Q H +V SS ++P D ++ F N+GM QFK+VFLG PY R
Sbjct: 4 MTTAQIRQQFLDFFASKQ-HQIVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA + A EFLT+ V
Sbjct: 63 ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVK 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L T + DEE + W ++G+ D I + NFW MG TGPCG
Sbjct: 122 LPQEKLLVTIY--------HDDEEAFEYWSKDIGLSEDRIIRIATSDNFWSMGDTGPCGP 173
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI YD G P + D + IEIWN+VF+ + R S T++PL K +DT
Sbjct: 174 CSEIFYDHGEHIWGGPPGTP----EEDGDRFIEIWNLVFMQYNRQSDGTMLPLPKQSVDT 229
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ILQ S Y+ DLF L+ V+ A+ D S R+++D
Sbjct: 230 GMGLERISAILQGVHSNYEIDLFQGLIAAAASVTNAQDMD-----------DKSLRVVAD 278
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R ++D + P + LR ++R A+ + QG +L + E +G
Sbjct: 279 HIRSCAFLISDGVMPSNEGRGYVLRRIIRRAVRHGNKLG--AQGSFFYKLVAALIEQMGQ 336
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ +L RI E EQF E GL + +
Sbjct: 337 AYPELAKQQEIIEKVL----RI--------------------EEEQFGKTLERGLAILEE 372
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L+ D I GD+ F LYDTYG ++ ++A +++T+ H+ FE+ + +R
Sbjct: 373 SLS-----DLKGDIIPGDLVFKLYDTYGFPADLTADVARERQMTIDHQGFEECM--AVQR 425
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT-FPCLDTNLVGIVIGDQVF 541
A+ A K+ DY+ S++ T F D+
Sbjct: 426 KTAQQAG------------------KFGADYNEQLKSEKLTEFKGYDST----------- 456
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGL-IFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
H+ A +++QL + G+ + D+T YA +GGQ D G T
Sbjct: 457 ---HHSATVVEIFAGGEAVQLLEDGQQGIVVLDRTPFYAESGGQTGDTG-----TITVAG 508
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
G+ + L H G V V + + ++ DAR R + HT +H+L+ ALR
Sbjct: 509 GEFNVTNTTKLGNAFAHHGTVQGRIGVNDKVDATID-DAR-RDSIKKNHTATHILHEALR 566
Query: 661 RVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
++L QK V D DFS + E ++ D + +E+ +ND I ++ M
Sbjct: 567 QLLGDHVGQKGSLVQPDRLRFDFSHF-EAVTKDELREIERVVNDEIRRNFALNTELMAID 625
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
+ + + GE Y D+V ++ I D S E C GTHV G I ++
Sbjct: 626 DAKAKGAMALF-GEKYDDEVRVVTIGD----YSIELCGGTHVERAGDIGLFKIVSESGIA 680
Query: 780 HGVRSIKCLTGDSSKAAV-ENGKHLSTAASF 809
GVR I+ +TG + A V E + L A+
Sbjct: 681 AGVRRIEAVTGADAVAYVSEQEQQLHDVAAL 711
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 31 IPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQRCVRAGGKHNDLENVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K+DA + A EFLT+ V LP ++L T
Sbjct: 91 FFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVKLPQEKLLVTI 131
>gi|288927362|ref|ZP_06421209.1| tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
gi|288330196|gb|EFC68780.1| tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
Length = 872
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 254/798 (31%), Positives = 373/798 (46%), Gaps = 105/798 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR SF +F +GH + S+P+V D ++ F N+GM Q+K++ LG T P PR
Sbjct: 1 MTANEIRDSFKQFF-EGKGHKIEASAPMVIKDDPTLMFTNAGMNQWKDIILG-TRDPEPR 58
Query: 72 V-ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
A+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+KR+A A E+L
Sbjct: 59 RRADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKREAIDYAWEYLVDVLH 118
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
P D LY T F GS++ G+P D+E + W + +P DHI NFWEMG TGPCG
Sbjct: 119 LNPQD-LYVTVFEGSEEEGIPRDDEAAEYWSK-HLPADHIINGNKHDNFWEMGETGPCGP 176
Query: 191 SSEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH D + A + VN D +IEIWNIVF+ R S ++ PL + IDTG
Sbjct: 177 CSEIHLDSRSAKEKAEVPGASLVNKDNPQVIEIWNIVFMQFNRKSDGSLQPLPMHVIDTG 236
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV LQ KTS YDTD+F P+++ I ++SG K YG +D + R+++D+
Sbjct: 237 MGFERLVRSLQGKTSNYDTDVFQPVIQEISQLSGLK-YGED------EKVDVAMRVIADH 289
Query: 307 SRMITVALADNMFP---DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R + ++AD P A +R ++R A+ + + + K L I E +G+
Sbjct: 290 LRAVAFSIADGQLPGNAKAGYVIRRILRRAVRYAYTFLGQRSAFMFKLLPTFIHE-MGEA 348
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
YPE++ I ++ EE F LR L G+
Sbjct: 349 YPELKAQRELIGRVMKEEEDAF--LRT--------------------------LEKGISM 380
Query: 424 LTKQLAR--DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
L ++ R T + G AF L+DTYG ++ + + L + F+ ++ + KE
Sbjct: 381 LNDEMERLKAEGKTTLDGTQAFRLFDTYGFPLDLTELICRENGLQVDAAQFDVEMQKQKE 440
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQV 540
R++ AA V + D + L+ + YDY Y+ RY
Sbjct: 441 RARNAAA--VENSDWVVLREG--EQNFVGYDYTEYECRILRYR----------------- 479
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
+ + N + L+ D T Y GGQ+ D GV L N +
Sbjct: 480 ------------------QVTQKKNTYFELVLDNTPFYGEMGGQVGDCGV--LVNGEE-- 517
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
V+I + + +H +V + P VD R HT +HLL+ AL+
Sbjct: 518 -TVDIIDTKRENNQSIH---IVKALPKDPKADFMACVDTDKREASAANHTATHLLDYALK 573
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
VL QK V D DFS + + ++ + + VE+ +ND+I + +D
Sbjct: 574 AVLGEHVEQKGSLVAPDTLRFDFSHF-QKVTDEELREVERLVNDLIRQDLPLDEHRNTPL 632
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
E + GE Y D V ++ S E C G H +TG I ++ S
Sbjct: 633 EEAKAMGAVALFGEKYGDTVRVVRFGP-----SCEFCGGIHARSTGRIGMFKIVSESSVA 687
Query: 780 HGVRSIKCLTGDSSKAAV 797
GVR ++ LTG + A+
Sbjct: 688 SGVRRVEALTGKRCEEAM 705
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRV-ANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
D ++ F N+GM Q+K++ LG T P PR A+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 32 DPTLMFTNAGMNQWKDIILG-TRDPEPRRRADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 90
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+KR+A A E+L P D LY T
Sbjct: 91 MLGNWSFGDYFKREAIDYAWEYLVDVLHLNPQD-LYVT 127
>gi|359445603|ref|ZP_09235327.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20439]
gi|358040562|dbj|GAA71576.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20439]
Length = 866
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 257/812 (31%), Positives = 381/812 (46%), Gaps = 118/812 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FLD+F + Q H +V SS ++P D ++ F N+GM QFK+VFLG PY R
Sbjct: 4 MTTAQIRQQFLDFFASKQ-HQVVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA + A EFLT+ V
Sbjct: 63 ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVK 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L T + DEE W ++G+P D I + NFW MG TGPCG
Sbjct: 122 LPKEKLLVTIY--------HDDEEAFGYWANDIGLPEDRIIRIATSDNFWSMGDTGPCGP 173
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI YD G P + D + IEIWN+VF+ + R T+ PL K +DT
Sbjct: 174 CSEIFYDHGEHIWGGPPGTP----EEDGDRFIEIWNLVFMQYNRQIDGTMEPLPKQSVDT 229
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ILQ S Y+ DLF L+ V+ A+ D S R+++D
Sbjct: 230 GMGLERISAILQGVHSNYEIDLFQGLIAAAASVTNAQDMD-----------DKSLRVVAD 278
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R ++D + P + LR ++R A+ + +G +L + E +G
Sbjct: 279 HIRSCAFLISDGVMPSNEGRGYVLRRIIRRAVRHGNKLG--AKGAFFYKLVAALIEQMGQ 336
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ +L RI E EQF E GL +
Sbjct: 337 AYPELAKQQEIIEKVL----RI--------------------EEEQFGKTLERGLAI--- 369
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L + L+ D + I GD+ F LYDTYG ++ ++A +++T+ H+ FE + +R
Sbjct: 370 -LEESLS-DLTGDVIPGDLVFKLYDTYGFPADLTADVARERQMTIDHQGFEACM--AVQR 425
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT-FPCLDTN-LVGIVIGDQV 540
A+ A K+ DY+ S ++T F D+N G V+ ++
Sbjct: 426 KTAQQAG------------------KFGADYNKQLKSDKHTDFKGYDSNHYRGTVV--EI 465
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLI-FDKTNLYATAGGQIDDIGVAYLTNTTQE 599
F A +S+ L + G+I D+T YA +GGQI D G T
Sbjct: 466 F-------------AGGESVSLLEDGQQGIIVLDRTPFYAESGGQIGDSGT-----ITVA 507
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
G+ + L H G V V + + ++ DAR R + HT +H+L+ AL
Sbjct: 508 GGEFNVTNTTKLGNAFAHHGTVQGRIGVNDKVDATID-DAR-RESIKKNHTATHILHEAL 565
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R++L QK V D DFS + E ++ + +E+ +ND I ++ M
Sbjct: 566 RQLLGEHVSQKGSLVQPDRLRFDFSHF-EAVTKQELREIERVVNDEIRRNFALNTELMAI 624
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ + + GE Y D+V ++ I D S E C GTHV G I ++
Sbjct: 625 DDAKAKGAMALF-GEKYDDEVRVVTIGD----YSIELCGGTHVERAGDIGLFKIVSESGI 679
Query: 779 NHGVRSIKCLTGDSSKAAV-ENGKHLSTAASF 809
GVR I+ +TG + A V E + L+ A+
Sbjct: 680 AAGVRRIEAVTGAEAIAYVNEQEQQLADVAAL 711
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 31 IPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQRCVRAGGKHNDLENVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K+DA + A EFLT+ V LP ++L T
Sbjct: 91 FFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVKLPKEKLLVTI 131
>gi|389876988|ref|YP_006370553.1| alanyl-tRNA synthetase [Tistrella mobilis KA081020-065]
gi|388527772|gb|AFK52969.1| alanyl-tRNA synthetase [Tistrella mobilis KA081020-065]
Length = 884
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 256/802 (31%), Positives = 377/802 (47%), Gaps = 101/802 (12%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F GH +V SSP+VP D ++ F N+GM QFKNVF G PY R
Sbjct: 3 SATEIRRTFLDFFAK-NGHEVVASSPLVPQNDPTLLFTNAGMVQFKNVFTGAEKRPYDRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSL 132
A SQKCVR GGKHNDL G + HHTFFEMLGN+SF DY+K A +A +T+ L
Sbjct: 62 ATSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQAIDLAWNLVTR-EFGL 120
Query: 133 PLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P DRL T + D+E W ++ G+ D I + NFW MG TGPCG
Sbjct: 121 PKDRLLVTVY--------HTDDEAAGYWKKIAGLSDDRIIRIATSDNFWAMGDTGPCGPC 172
Query: 192 SEIHYDMKGE--PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
SEI +D GE P + D + IEIWN+VF+ +++++ + L K IDTG+G
Sbjct: 173 SEIFFD-HGEDIPGGPPGSPDEDGDRFIEIWNLVFMQYEQIAPGNRLDLPKPSIDTGMGL 231
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ER+ ILQ + YD D+F L+ SG +P G S+R+++D+ R
Sbjct: 232 ERIAAILQGQHDNYDIDIFRRLISASATASGTEPDG---------PFKMSHRVIADHLRS 282
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
+AD + P + LR ++R A+ + + + L+ L + E +GD Y E
Sbjct: 283 SGFLIADGVLPSNEGRGYVLRRIMRRAMRHAHKMGVAE--PLMYRLVPALIETMGDHYHE 340
Query: 367 IQDSINKIQLILG-EESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
++ + I L EE+R L + ++EE LG
Sbjct: 341 LRRAQALITETLKLEETRFRQTLDRG-----------------MRLLEETTQTLGAD--- 380
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
++ G++AF LYDTYG ++ Q++ A+ + FE L E R+KA
Sbjct: 381 ---------EKLPGEVAFRLYDTYGFPLDLTQDVLRAEGRGVDTAGFETSLAE--ARAKA 429
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
+A+ + D F V D ++ Y D G+V Q +D
Sbjct: 430 RASWSGSGEAATDRVWFEVRDAAGATEFLG------YGATAAD----GVV---QAVLVD- 475
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG-KVE 604
GA +D+ E + + L+ ++T Y +GGQ+ D G T E G ++E
Sbjct: 476 --------GAPVDAA--EAGSQIALVVNQTPFYGESGGQMGDTG-----RITGEGGLEIE 520
Query: 605 IGELASLEGK-IVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
+ + A G I+H G VV+ +V G R+ VD R H+ +HLL+AALRR L
Sbjct: 521 VTDTAKKLGDLIIHMGRVVAG-RVAKGAAVRLTVDTARRDALRAHHSATHLLHAALRRRL 579
Query: 664 T-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
QK V D DFS ++ + + A+E +N +I +V R M E
Sbjct: 580 GDHVTQKGSLVAPDRLRFDFS-QPTPIAREDLKAIEADVNRLIRANGEVGTRLMTPDEAI 638
Query: 723 FLTHLTVIPGEIYPDDVILIDISD------KENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + GE Y D+V ++D+ + + S E C GTHV TG I ++
Sbjct: 639 AQGAMALF-GEKYGDEVRVVDMGSLLGEDGRSSAYSVELCGGTHVTRTGDIGLFKIVSES 697
Query: 777 SYNHGVRSIKCLTGDSSKAAVE 798
GVR I+ + GD++ A VE
Sbjct: 698 GVAAGVRRIEAVAGDAALAYVE 719
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFKNVF G PY R A SQKC+R GGKHNDL G + HHT
Sbjct: 29 VPQNDPTLLFTNAGMVQFKNVFTGAEKRPYDRAATSQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K A +A +T+ LP DRL T
Sbjct: 89 FFEMLGNFSFGDYFKEQAIDLAWNLVTR-EFGLPKDRLLVT 128
>gi|390954539|ref|YP_006418297.1| alanyl-tRNA synthetase [Aequorivita sublithincola DSM 14238]
gi|390420525|gb|AFL81282.1| alanyl-tRNA synthetase [Aequorivita sublithincola DSM 14238]
Length = 870
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 253/798 (31%), Positives = 368/798 (46%), Gaps = 111/798 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ SK IRS FL++F + Q H +V S+P+V D ++ FVNSGM FK FLG R
Sbjct: 1 MNSKEIRSQFLEFFKSKQ-HAIVPSAPMVVKNDPTLMFVNSGMAPFKEYFLGNGKPKSNR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 IADTQKCLRVSGKHNDLEEVGMDTYHHTMFEMLGNWSFGDYFKKEAIEWAWELLTEV-YK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ + LY T F G + GL D E ++W + VP + I K NFWEMG GPCG
Sbjct: 119 IDKEMLYVTIFEGDESEGLERDTEAYNLWKQF-VPEERILNGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ A VN D ++EIWN+VF+ R + T+ L ++DTG+
Sbjct: 178 SEIHVDIRSAEEKAKIPGNDLVNNDHPQVVEIWNLVFMQFNRKANGTLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQNK S YDTD+F PL+ I ++ T+ T + D+ T R+++D+
Sbjct: 238 GFERLCMALQNKQSNYDTDVFTPLIREIGTITNT-----TYGTDEKKDIAT--RVIADHV 290
Query: 308 RMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + ++AD P T + + + F K+ + +L ++ +G +P
Sbjct: 291 RAVAFSIADGQLPSNTGSGYVIRRILRRAIRYGFTFLDKKEPFIFKLIETLSAQMGVAFP 350
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E+ N I ++ EE + F LR L+Q GLVL
Sbjct: 351 ELITEKNLITNVIREEEQSF--LRT---------------LDQ-------GLVL-----L 381
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ + EISG AF LYDT+G ++ + + +L + F+ +L + KERS
Sbjct: 382 ENIIETADSKEISGKKAFELYDTFGFPIDLTALILRERGYSLNEKDFDAELQQQKERS-- 439
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
+AA+ V D + L+ DD ++ YDT + QV
Sbjct: 440 RAATKVETGDWIVLEQ----DDDEEF-VGYDT------------------LQTQVKITRY 476
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI--------GVAYLTNTT 597
+ + G L+F+ T Y GGQ+ D GV Y+ +T
Sbjct: 477 RKVESKKDGEMYQ-----------LVFNLTPFYPEGGGQVGDKGYLKAADGGVTYIVDTK 525
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+EN I+HF + P T VD R HT +HLL+
Sbjct: 526 KEN------------NLIIHF---TKTLPRDPKATFMAVVDELQRSRTASNHTATHLLHQ 570
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
LR +L QK V S DFS Y + +S + + VE ++N I + ++ R
Sbjct: 571 GLRNILGEHVAQKGSMVHSRNLRFDFSHYAK-VSNEELKQVEDFVNARIREGIALEERRN 629
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + GE Y D V I S E C GTHV NT I +
Sbjct: 630 IPYQQALDEGAIALFGEKYGDAVRAIKFGK-----SMELCGGTHVPNTNEIWHFIITSEG 684
Query: 777 SYNHGVRSIKCLTGDSSK 794
+ G+R I+ +TGD++K
Sbjct: 685 AVASGIRRIEAITGDAAK 702
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 59/84 (70%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ FVNSGM FK FLG R+A++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFVNSGMAPFKEYFLGNGKPKSNRIADTQKCLRVSGKHNDLEEVGMDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTK 905
LGNWSF DY+K++A A E LT+
Sbjct: 92 LGNWSFGDYFKKEAIEWAWELLTE 115
>gi|387888227|ref|YP_006318525.1| alanyl-tRNA synthetase [Escherichia blattae DSM 4481]
gi|414595434|ref|ZP_11445055.1| alanyl-tRNA synthetase [Escherichia blattae NBRC 105725]
gi|386923060|gb|AFJ46014.1| alanyl-tRNA synthetase [Escherichia blattae DSM 4481]
gi|403193598|dbj|GAB82707.1| alanyl-tRNA synthetase [Escherichia blattae NBRC 105725]
Length = 875
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 270/840 (32%), Positives = 390/840 (46%), Gaps = 149/840 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVSSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRSYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGAQWFN 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP DRL+ T + D+E DIW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKDRLWVTVY--------ETDDEAFDIWANEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P SA D + IEIWNIVF+ R S T++PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSA----EEDGDRYIEIWNIVFMQFNRQSDGTMLPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L++ + V+GA+ DL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRILIKAVADVTGAQ------------DLSS 278
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLV 349
S R+++D+ R +AD + P + LR ++R A +L ++D F
Sbjct: 279 KSLRVIADHIRSCAFLIADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKDTF-------- 330
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
Y + L DV D + + Q ++ + ++KT E EQF
Sbjct: 331 ---FYKLVGPLIDVMGSAGDDLKRQQEMV------------------EQVLKT--EEEQF 367
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L LT QL D + G+ AF LYDTYG ++ ++ + + +
Sbjct: 368 ARTLERGLALLDDELT-QLKGDT----LDGETAFRLYDTYGFPLDLTADVCRERNIKVDE 422
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
F + +R +A+ +S TD Y DT S+ + LD
Sbjct: 423 AGFNAAME--TQRRRARESSGFG------------TD--YNSMIRVDTASEFKGYDTLDL 466
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
N G + +D G S+D + A V + DKT YA +GGQ+ D G
Sbjct: 467 N--GTIT---ALFVD---------GKSVDQVNPGQEAVV--VLDKTPFYAESGGQVGDKG 510
Query: 590 V------AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRL 643
+ TQ+ G+ IG +L ++ G+ V + +VD R
Sbjct: 511 ELKAASGTFQVTDTQKYGQA-IGHQGTLSHGVLTVGDRVEA-----------QVDEARRA 558
Query: 644 GCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN 702
H+ +HL++AALR+VL T QK V DFS + E + + + AVE +N
Sbjct: 559 RIRLNHSATHLMHAALRQVLGTHVAQKGSLVNDKALRFDFSHF-EGMKAEEIRAVEDLVN 617
Query: 703 DVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVF 762
I + V+ M E + + GE Y D V ++ + D S E C GTH
Sbjct: 618 AQIRRNLPVETNIMDLEEAKAKGAMALF-GEKYDDHVRVLSMGD----FSTELCGGTHAS 672
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIPYGD 822
TG I ++ GVR I+ +TG+ + AAV A Q+ ++ + GD
Sbjct: 673 RTGDIGLFHIVAESGTAAGVRRIEAVTGEGAIAAVH--------AQSDQLQDIAQLLKGD 724
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRSYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA A E LT +LP DRL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAINFAWELLTGAQWFNLPKDRLWVT 131
>gi|289549314|ref|YP_003474302.1| alanyl-tRNA synthetase [Thermocrinis albus DSM 14484]
gi|289182931|gb|ADC90175.1| alanyl-tRNA synthetase [Thermocrinis albus DSM 14484]
Length = 864
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 249/797 (31%), Positives = 381/797 (47%), Gaps = 127/797 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ IR FL +F +GHT V+S+P++P GD ++ FVN+GM FKNVFLGL PY R
Sbjct: 1 MTGNEIRERFLSFF-ERKGHTRVRSAPLIPEGDPTLLFVNAGMVPFKNVFLGLEKRPYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ QKC+RV GKHNDL G S HHTFFEMLGN+SF DY+KR+A A EFLT+ +
Sbjct: 60 AVSCQKCLRVSGKHNDLEQVGYTSRHHTFFEMLGNFSFGDYFKREAILYAWEFLTQE-LG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLE-LGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RL+ + + DEE IW E +G+P + + + G + NFW+MG GPCG
Sbjct: 119 LPENRLWVSVY--------KDDEEALRIWTEEVGLPEERVWRMGEEDNFWQMGEVGPCGP 170
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SSEI+ + ++ +EIWN+VF+ + R + + PL IDTG+G E
Sbjct: 171 SSEIYVER-----------DSSEERFLEIWNLVFMQYNRDPSGHLHPLPHPSIDTGMGLE 219
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ ++LQN + ++TDL P+L E+++G K YG+ + T D + R+++D+ R +
Sbjct: 220 RIASVLQNTPTNFETDLLRPILAFGEEITG-KAYGQDYLT------DVALRVIADHLRAL 272
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYN----IAEILGDVYPE 366
T A+AD + T R V +L F K G + + Y + ++ D YPE
Sbjct: 273 TFAVADGVIFSNTG--RGYVLRRILRRALRFGYKLG-VYEPFLYKGVDTVVRVMKDAYPE 329
Query: 367 IQDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
+ + ++ LI EE R LR+ P +E+
Sbjct: 330 LIQAKEYVKGLIKVEEERFLQTLRRG-----------MPAVEEL---------------- 362
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
L + + G FT+YDTYG ++++E+A K LT+ E FE+++N +ER++
Sbjct: 363 --LQKGEKTGVLDGKDVFTIYDTYGFPLDLLEEMAREKGLTIDMEGFEREMNLQRERAR- 419
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
KHF + + K Y H K F +G Q +
Sbjct: 420 --------------KHFKIEAKQIKPVYSHLKELGKTSRF-----------VGYQQYSSF 454
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV------AYLTNTTQ 598
+ + G + +L ++ ++T YA GGQ+ D G+ + TQ
Sbjct: 455 TKVLAIVKDGQLVS--ELREGEKGEIVIEETPFYAEGGGQVGDTGIIEGMEGVFHVEDTQ 512
Query: 599 ENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
+ EG I+H G VV+ ++ G ++DA R R HT +HLL+AA
Sbjct: 513 ----------SPTEGVILHIG-VVTKGRIKVGDEVLAQIDAERREDIRRNHTATHLLHAA 561
Query: 659 LRRVLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
LR VL +++ + SD+ DF+ + L + + +E+ +N I V
Sbjct: 562 LRYVLGDHVRQAGSLVSDKYLRFDFT-HSSPLKEEEIKKIEELVNQQIMKNEPVI----- 615
Query: 718 ASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
E+ + T ++ I E Y + V +I S+E C GTHV TG I +I
Sbjct: 616 VEEMDYRTAISSGAIAIFEEKYGERVRVISAGS----FSKELCGGTHVDRTGDIGYFKII 671
Query: 774 GYKSYNHGVRSIKCLTG 790
+S GVR I TG
Sbjct: 672 SQESVGAGVRRIVAKTG 688
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP GD ++ FVN+GM FKNVFLGL PY R + QKC+RV GKHNDL G S HHT
Sbjct: 28 IPEGDPTLLFVNAGMVPFKNVFLGLEKRPYTRAVSCQKCLRVSGKHNDLEQVGYTSRHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KR+A A EFLT+ + LP +RL+ +
Sbjct: 88 FFEMLGNFSFGDYFKREAILYAWEFLTQ-ELGLPENRLWVS 127
>gi|330752589|emb|CBL87535.1| alanyl-tRNA synthetase [uncultured Flavobacteriia bacterium]
Length = 873
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 265/839 (31%), Positives = 397/839 (47%), Gaps = 110/839 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR FLD+F ++ H +V S+P+V D ++ F N+GM FK FLG R
Sbjct: 1 MKSFDIRKQFLDFF-ESKAHEIVSSAPMVIKDDPTLMFTNAGMNPFKEFFLGFAQPTSKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHTFFEMLGNWSF DY+K++A A E L
Sbjct: 60 LADTQKCLRVSGKHNDLEEVGIDTYHHTFFEMLGNWSFGDYFKKEAIEWAWELLI-DIYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ +RLY T F GS L D E ++W + +P D I K NFWEMG GPCG
Sbjct: 119 IDAERLYVTIFEGSLGEKLEKDTEAYNLWKAI-LPEDRILLGSKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D + + P SAL VN D +IE+WN+VFI R + + L K +IDT
Sbjct: 178 SEIHIDTRPKTEWEKTPGSAL--VNKDHPQVIELWNLVFIEFNRNADGGLEKLPKKHIDT 235
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL +LQ K S YDTD+F P++ IEK++ YG S ++D+ + R+++D
Sbjct: 236 GMGFERLCMVLQGKISNYDTDVFTPIINEIEKITKYN-YG----VSEKSDV--AIRVIAD 288
Query: 306 YSRMITVALADNMFPD--ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+ R + A+AD P + + + F ++ + L I++ L D+
Sbjct: 289 HIRTVFFAIADGQLPSNIGAGYVIRRILRRAIRYGFTFLDQKKPFIHLLVEIISKQLSDI 348
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ +E ++ N+ K KE + +KT L+Q GLV
Sbjct: 349 FPELK-----------KEKKLAQNVIK---KEEESFLKT---LDQ-------GLV----- 379
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + + ++ +I GD F LYDT+G ++ +A + L + E FE+ + + K RS
Sbjct: 380 LLENVIKNLKAKKIPGDKVFELYDTFGFPFDLTTLIANERGLEIDKEGFEKAMGKQKSRS 439
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+ S V D ++ SK+ F DT I+I
Sbjct: 440 RGATLSKVGDWIVI-------------------KESKKEEFVGYDTLESNILI------- 473
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
R+ + + D + L FDKT Y GGQ+ D G L ENG++
Sbjct: 474 ----TRYRKMNTNKDG------DFYQLTFDKTPFYPEGGGQVGDQGYLEL-----ENGEI 518
Query: 604 -EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
I + ++H S ++ +V V+ +RL HT +HL++ ALR V
Sbjct: 519 LNITDTKKENNLVIHH---CKSLPKKMDISFKVFVNPELRLNTSSNHTATHLVHQALRFV 575
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L QK V S DFS + + L + + VEK++N+ I ++ ++ + +
Sbjct: 576 LGNHVQQKGSMVNSKMFRFDFSHFSK-LKNEQLKNVEKFVNERILEKIPLEEQREIPHDK 634
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
+ GE Y +V I S E C GTHV NT I +I + G
Sbjct: 635 ALEEGAIALFGEKYGKNVRTIRFGK-----SIELCGGTHVKNTSDIWYFKIISESAVASG 689
Query: 782 VRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIPYGDDSIAFVNSGMCQFKNVFL 840
VR I+ +TG + K EN + + +Q+L P A +N Q +N+FL
Sbjct: 690 VRRIEAVTGSAVKNYFEN--QTTILKNINQLLKQSQDPVK----AILN---LQSENIFL 739
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM FK FLG R+A++QKC+RV GKHNDL G D+YHHTFFEM
Sbjct: 32 DPTLMFTNAGMNPFKEFFLGFAQPTSKRLADTQKCLRVSGKHNDLEEVGIDTYHHTFFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E L + +RLY T
Sbjct: 92 LGNWSFGDYFKKEAIEWAWELLI-DIYKIDAERLYVT 127
>gi|359439375|ref|ZP_09229350.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20311]
gi|358025953|dbj|GAA65599.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20311]
Length = 866
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 257/812 (31%), Positives = 384/812 (47%), Gaps = 118/812 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FLD+F + Q H +V SS ++P D ++ F N+GM QFK+VFLG PY R
Sbjct: 4 MTTAQIRQQFLDFFASKQ-HQVVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA + A EFLT+ V
Sbjct: 63 ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVK 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L T + DEE W ++G+P D I + NFW MG TGPCG
Sbjct: 122 LPKEKLLVTIY--------HDDEEAFGYWANDIGLPEDRIIRIATSDNFWSMGDTGPCGP 173
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI YD G P + D + IEIWN+VF+ + R S T+ PL K +DT
Sbjct: 174 CSEIFYDHGEHIWGGPPGTP----EEDGDRFIEIWNLVFMQYNRQSDGTMEPLPKQSVDT 229
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ILQ S Y+ DLF L+ V+ A+ D S R+++D
Sbjct: 230 GMGLERISAILQGVHSNYEIDLFQGLIAAAASVTNAQDMD-----------DKSLRVVAD 278
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R ++D + P + LR ++R A+ + +G +L + E +G
Sbjct: 279 HIRSCAFLISDGVMPSNEGRGYVLRRIIRRAVRHGNKLG--AKGAFFYKLVAALIEQMGQ 336
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ +L RI E EQF E GL +
Sbjct: 337 AYPELAKQQEIIEKVL----RI--------------------EEEQFGKTLERGLAI--- 369
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L + L+ D + I GD+ F LYDTYG ++ ++A +++T+ H+ FE + +R
Sbjct: 370 -LEESLS-DLTGDVIPGDLVFKLYDTYGFPADLTADVARERQMTIDHQGFEACM--AVQR 425
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT-FPCLD-TNLVGIVIGDQV 540
A+ A K+ DY+ S ++T F D T+ G V+ ++
Sbjct: 426 KTAQQAG------------------KFGADYNEQLKSDKHTDFKGYDSTHYSGTVV--EI 465
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLI-FDKTNLYATAGGQIDDIGVAYLTNTTQE 599
F A+ +++ L + G+I D+T YA +GGQI D G T
Sbjct: 466 F-------------AAGEAVSLLEDGQHGIIVLDRTPFYAESGGQIGDSG-----TITVA 507
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
G+ + L H G+V V + + ++ DAR R + HT +H+L+ AL
Sbjct: 508 GGEFVVTNTTKLGNAFAHHGSVQGRIGVNDKVDATID-DAR-RDSIKKNHTATHILHEAL 565
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R++L QK V D DFS + E ++ + +E+ +ND I ++ M
Sbjct: 566 RQLLGEHVSQKGSLVQPDRLRFDFSHF-EAVTKQELREIERVVNDEIRRNFALNTELMAI 624
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ + + GE Y D+V ++ I D S E C GTHV G I ++
Sbjct: 625 DDAKAKGAMALF-GEKYDDEVRVVTIGD----YSIELCGGTHVERAGDIGLFKIVSESGI 679
Query: 779 NHGVRSIKCLTGDSSKAAV-ENGKHLSTAASF 809
GVR I+ +TG + A V E + L+ A+
Sbjct: 680 AAGVRRIEAVTGAEAIAYVSEQEQQLADVAAL 711
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 31 IPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQRCVRAGGKHNDLENVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K+DA + A EFLT+ V LP ++L T
Sbjct: 91 FFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVKLPKEKLLVTI 131
>gi|156101531|ref|XP_001616459.1| alanyl-tRNA synthetase [Plasmodium vivax Sal-1]
gi|148805333|gb|EDL46732.1| alanyl-tRNA synthetase, putative [Plasmodium vivax]
Length = 1197
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 269/874 (30%), Positives = 408/874 (46%), Gaps = 148/874 (16%)
Query: 15 KSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APY 69
+ +R F++YF + HT+V+S+ ++PY D+++ F N+GM QFK +FLG
Sbjct: 211 EEVRGGFINYF-KEKNHTVVESASVIPYNDNTLLFTNAGMNQFKKIFLGQVDKSSDLGKL 269
Query: 70 PRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP 129
R ++QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K ++ A + LT
Sbjct: 270 KRAVDTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKEESIDYAWDLLTNVY 329
Query: 130 VSLPLDRLYFTYFGGSDQYG-LPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
P +RLY TYFGG ++ P D ET+ IWL+ V I GMK NFWEM TGPC
Sbjct: 330 KIDP-NRLYVTYFGGDEKLASCPEDLETKKIWLKY-VDESRILPFGMKENFWEMADTGPC 387
Query: 189 GYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
G SEIHYD G A + VN D ++EIWNIVF+ + + + L IDTG+G
Sbjct: 388 GPCSEIHYDRIGN-RDASSLVNKDDPSVLEIWNIVFMQYNKDEKKNMNKLPFPCIDTGMG 446
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKP-YGRTFTTSNRTDLDTSYRMLSDYS 307
ER+ +ILQN S YDTDLF+P+ + I+++ P YG + +D +YR++SD+
Sbjct: 447 LERITSILQNVESNYDTDLFMPIFKQIKEIFNYLPEYGGKVNEEDVDRIDYAYRVVSDHI 506
Query: 308 RMITVALADNMFPDATAKLRNVVRDALL-----ISEDVFKVKQGKL-VKELSYNIAEILG 361
R +T+A++D P RN V ++ + + +F+V L +L ++ IL
Sbjct: 507 RCVTIAISDGCLPGNEG--RNYVIRRIIRRAIRVGKQIFQVGSNVLWFYKLVDSVCHILN 564
Query: 362 DVYPEIQDS--INKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
+ +++D +N I+ ++ +E +F+ + V +QFN + + G
Sbjct: 565 KCFTDLKDEDRVNYIKSVIKQEEMVFNRTLEKGV-------------DQFNKIIKRGNTS 611
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
G L SG AF LY +YG +++Q + K L F NEL
Sbjct: 612 GGDNL------------FSGKDAFDLYTSYGFPIDLVQIMCEEKNFKLNMTEF----NEL 655
Query: 480 KERSKAKAASNVPDID-LMDL----------KH-FPVTDDKYKYDYHYDTNSKRYTFPCL 527
+ + + +N I+ DL KH T D YKY++ + + +
Sbjct: 656 FRKHQLVSDTNNFKINKFFDLPVEKAHELKEKHGVAATVDHYKYEW--NNADGKNVMAKV 713
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQL-EHNAWVGLIFDKTNLYATAGGQID 586
DT +V I G+ +DSI+ + LI +TN Y GGQI
Sbjct: 714 DTGVVVIYDGENF----------------LDSIETASEDKKYALILRETNFYYENGGQIY 757
Query: 587 DIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPG--LTSRVEVDARMRLG 644
D GV E K E+ + + ++H G V+ K+ + + V D R +
Sbjct: 758 DTGV-----IQNEQMKFEVVNVQKMNEYVLHIG-VLQEGKIQKNDCVHTVVNFDRRKLVA 811
Query: 645 CMRAHTTSHLLNAALRRVLT--------------------------------CTYQKSCR 672
C HT +HLLN +++VLT C QK
Sbjct: 812 C--NHTATHLLNFVIKKVLTEYVMHSKGGAQNGDLAHTPNEKEQTGGNSIFNCD-QKGSL 868
Query: 673 VFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPG 732
V ++ DFS + + +S + V+ +E +ND+I ++ V R M E + + I
Sbjct: 869 VDDEKLRFDFSFF-QNVSDELVSKIESQVNDLIRQELSVSVRTMDLKESKKIKGIRAIFE 927
Query: 733 EIYPD--DVILIDISDKENVI-----------SREPCCGTHVFNTGHIESCTVIGYKSYN 779
E Y D +V+ ID +D + ++ S E C GTH+ NT I+ + +S
Sbjct: 928 EDYADVVNVVFID-NDVDKILNHLDVNYSYLCSIELCGGTHIANTKFIKKFVITSEESIG 986
Query: 780 HGVRSIKCLTGDSSKAAVENGKHLSTAASFSQIL 813
G+ I AV N K A F +L
Sbjct: 987 KGIYRIN---------AVTNKKAEEVEAKFDDLL 1011
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 68/107 (63%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D+++ F N+GM QFK +FLG R ++QKCIR GGKHNDL G+D
Sbjct: 235 IPYNDNTLLFTNAGMNQFKKIFLGQVDKSSDLGKLKRAVDTQKCIRAGGKHNDLDDVGKD 294
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K ++ A + LT P +RLY T+
Sbjct: 295 VYHHTFFEMLGNWSFGDYFKEESIDYAWDLLTNVYKIDP-NRLYVTY 340
>gi|399154896|ref|ZP_10754963.1| alanyl-tRNA ligase [gamma proteobacterium SCGC AAA007-O20]
Length = 866
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 256/797 (32%), Positives = 378/797 (47%), Gaps = 121/797 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL+YF + GHT+ S+ +VP+ D+++ FVNSGM FK+VF G T PY R
Sbjct: 1 MKTDEIRQKFLNYF-ESHGHTIEPSASLVPHNDNTLLFVNSGMVPFKDVFTGTTKRPYKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA R +FLT+ +S
Sbjct: 60 AVTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKSDAIRFCWDFLTEE-LS 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L+ + F D+E DIW+ E+G P D I + G K NFW+M TGPCG
Sbjct: 119 LPKEKLWVSVF--------EDDDEAADIWINEIGFPADRISRCGAKDNFWQMADTGPCGP 170
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI YD + G P + D + IEIWN+VF+ R T+VPL +DT
Sbjct: 171 CSEIFYDHGEHILGGPPGTP----EEDGDRFIEIWNLVFMQFDRQQDGTLVPLKSTGVDT 226
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ERL +LQN+ + YD D F L I K++ P N S R+++D
Sbjct: 227 GMGLERLAAVLQNENNNYDIDNFKELTNAIVKLT---PKVAKIKGDN-----ASVRVIAD 278
Query: 306 YSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQG-KL-VKELS-YNIAEILGD 362
+ R + D + PD N R +L ++ G KL ++E+ Y + +L
Sbjct: 279 HIRSTAFMIVDGITPD------NEGRGYVLRRIIRRAIRHGHKLGIEEIFFYKLVPLLAQ 332
Query: 363 VY----PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
Y PE+ +++ ++ +L +E F +KT L
Sbjct: 333 QYEKAFPELMANLSHVEKVLKKEEERF--------------IKT--------------LD 364
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
LG+ L + + +I G++AF LYDTYG ++ ++A + LT+ E FE K+ E
Sbjct: 365 LGMGILETAI-NELKGKDIDGEIAFKLYDTYGFPVDLTADVARERGLTVDMEGFEIKMKE 423
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKY-DYHYDTNSKRYTFPCLDTNLV-GIVI 536
K+R++ D D K V DD+ K+ Y N+ + D LV I
Sbjct: 424 QKDRARKAG-------DFNDKKSNVVVDDETKFLGYELFNNNATVSVIIKDDQLVNSISE 476
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
GD+ +I D+++ Y +GGQ D G+
Sbjct: 477 GDEAI----------------------------VILDQSSFYGESGGQTGDSGLLL---- 504
Query: 597 TQENGKVEIGELA-SLEGKIVHFGNVVS-SFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
++ K E+ + H+G +VS S KV G ++D + R M H+ +HL
Sbjct: 505 -KKGAKFEVNDTQRQASNAFEHYGRLVSGSLKV--GSKVEAKIDQQRRKNIMNNHSATHL 561
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
L+ ALR++L QK V +D+ LDFS + E +S + VE +N I +V
Sbjct: 562 LHEALRQILGDKVQQKGSLVEADKLRLDFS-HDELVSRAELDKVEAIVNTQILGNSEVKT 620
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
E + GE Y D V ++ + + + S E C GTHV G I +I
Sbjct: 621 EETDI-ETAMKKGAMALFGEKYGDSVRVLSMGN--DNFSVELCGGTHVKRLGDIGRFKII 677
Query: 774 GYKSYNHGVRSIKCLTG 790
S G+R I+ +TG
Sbjct: 678 SESSIASGIRRIEAITG 694
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D+++ FVNSGM FK+VF G T PY R SQ+C+R GGKHNDL G + HHT
Sbjct: 28 VPHNDNTLLFVNSGMVPFKDVFTGTTKRPYKRAVTSQRCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA R +FLT+ +SLP ++L+ +
Sbjct: 88 FFEMLGNFSFGDYFKSDAIRFCWDFLTE-ELSLPKEKLWVS 127
>gi|225848695|ref|YP_002728858.1| alanyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644297|gb|ACN99347.1| alanyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 875
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 254/798 (31%), Positives = 390/798 (48%), Gaps = 100/798 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR SFL YF ++GHT+VKS+ I+P D ++ FVN+GM FKNVFLGL PY R
Sbjct: 4 MAADEIRESFLKYF-ESKGHTIVKSASIIPENDPTLLFVNAGMVPFKNVFLGLEERPYKR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A+ QK RV GKHNDL G HHTFFEMLGN+SF DY+K++A ++LT +
Sbjct: 63 AASCQKVFRVSGKHNDLENVGYTPRHHTFFEMLGNFSFGDYFKKEAIEFTWDYLTN-YLK 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLE-LGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+P ++L + F D+E +IW + +G+P + IK+ G K NFW MG TGPCG
Sbjct: 122 IPQEKLLVSVF--------EEDDEAFEIWNKVIGLPEEKIKRMGYKDNFWSMGDTGPCGP 173
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SSEI+YD +GE + + +EIWN+VF+ + R + + PL IDTG+G E
Sbjct: 174 SSEIYYD-RGEKFGNPEFGSDEDFRYLEIWNLVFMQYNRDESGNLTPLPNPSIDTGMGLE 232
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +++Q S YDTDLF P++ E+++G K YG+ N D D + R+++D+ R I
Sbjct: 233 RIASVIQQVDSNYDTDLFKPIIRFAEEIAG-KTYGK-----NEKD-DVAMRVIADHLRAI 285
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD----VYPE 366
T ++D + P R V +L + G + + Y +++ D YPE
Sbjct: 286 TFLISDGVLPSNEG--RGYVLRRILRRALRYGRNLG-IDRPFLYEGVDVVIDKMKNAYPE 342
Query: 367 IQDSINKIQLIL-GEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
+ + N I+ I EE + LR++ ++ + + E G K+LT
Sbjct: 343 LVPNRNYIKKITKSEEEKFIKTLRRSMDILYQMIETAKKE--------------GRKFLT 388
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
G+ F LYDTYG +++Q++ + +T + FE+ + E KERS+
Sbjct: 389 -------------GEEVFKLYDTYGFPIDLLQDILRDESMTFNIKEFEELILEQKERSRK 435
Query: 486 KAASNVPDID--LMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+ + + LK ++ Y+ +SK ++ IV DQ
Sbjct: 436 AFKTTAKQVKPIYLQLKSRLPENEFIGYNTLISESSK----------VLAIVKEDQ---- 481
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
+ A+ G ++ +I D T Y GGQ+ D GV N E
Sbjct: 482 ---TVSQAKEGEEVE-----------IILDITPFYPEKGGQVGDRGVIEGENFLAEV--- 524
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
I EG I+H ++ V G R +VD R MR HT +HLL++ALR +L
Sbjct: 525 -IDTQTPTEGLILHKVKILFG-TVKEGEFVRAKVDKERRENIMRHHTATHLLHSALRNIL 582
Query: 664 TCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
+++ + SDE DF+ + E+LS + + +E+++N I +V + M E
Sbjct: 583 GDHVKQAGSLVSDEYLRFDFTHF-ESLSDEEIKMIEEFVNREIMKNEEVVCQEMSYEE-A 640
Query: 723 FLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGV 782
+ I E Y D V +I +S+E C GTHV TG I ++ + + G
Sbjct: 641 LNSGAIAIFEEKYGDVVRVISAG-----VSKELCGGTHVKRTGDIGYFKILSEYAVSSGT 695
Query: 783 RSIKCLTGDSSKAAVENG 800
R I+ + G AVE G
Sbjct: 696 RRIEAVAGIR---AVEQG 710
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ FVN+GM FKNVFLGL PY R A+ QK RV GKHNDL G HHT
Sbjct: 31 IPENDPTLLFVNAGMVPFKNVFLGLEERPYKRAASCQKVFRVSGKHNDLENVGYTPRHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRL 915
FFEMLGN+SF DY+K++A ++LT + +P ++L
Sbjct: 91 FFEMLGNFSFGDYFKKEAIEFTWDYLTN-YLKIPQEKL 127
>gi|340349787|ref|ZP_08672790.1| alanine--tRNA ligase [Prevotella nigrescens ATCC 33563]
gi|339609990|gb|EGQ14851.1| alanine--tRNA ligase [Prevotella nigrescens ATCC 33563]
Length = 889
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 262/806 (32%), Positives = 379/806 (47%), Gaps = 122/806 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR SF +F ++GH +V S+P+V D ++ F N+GM Q+K++ LG T P PR
Sbjct: 4 MTANEIRDSFKKFF-ESKGHVIVPSAPMVIKDDPTLMFTNAGMNQWKDIILG-TKDPEPR 61
Query: 72 V-ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K A A E+L
Sbjct: 62 RRTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEGAIDYAWEYLVDVLK 121
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
P D LY T F GS + G+P D+E W + +P DHI NFWEMG TGPCG
Sbjct: 122 LNPAD-LYVTVFEGSPEDGIPRDDEAAKYWAK-HLPADHIIDGNKHDNFWEMGETGPCGP 179
Query: 191 SSEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH D + A VN D +IEIWNIVF+ +R S ++ PLS + IDTG
Sbjct: 180 CSEIHVDSRSNEEKAQTPGRELVNKDNPQVIEIWNIVFMQFQRKSDGSLSPLSMHVIDTG 239
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTT---------SNRTDLD 297
+GFERLV +LQ K S YDTD+F P ++ IE++SG K YG FTT + + +D
Sbjct: 240 MGFERLVRMLQGKNSNYDTDIFQPTIKEIERLSGKK-YG--FTTPSGKNGEAKTEQEKID 296
Query: 298 TSYRMLSDYSRMITVALADNMFP---DATAKLRNVVRDALLISEDVFKVKQGKLVKELSY 354
+ R+++D+ R + ++AD+ P A +R ++R A+ + K+ + K L+
Sbjct: 297 IAMRVIADHMRAVAFSIADSQLPGNAKAGYVIRRILRRAVRYAYTFLNQKEAFIYKLLNT 356
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
I E +G YPE+ I ++ EE F LR
Sbjct: 357 FIHE-MGGAYPELTAQRELIVRVIKEEEDSF--LRT------------------------ 389
Query: 415 PGLVLGVKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF 472
L G+ LT + + TE+SG AF L+DTYG ++ + + ++ F
Sbjct: 390 --LEKGINLLTNTMDEMKAQGKTELSGKEAFRLFDTYGFPLDLTELICREHGFSVDGRQF 447
Query: 473 EQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKY-KYDYHYDTNSKRYTFPCLDTNL 531
E+++ + K R++ AA V + D + L+ + K+ YDY + C
Sbjct: 448 EEEMAQQKARARNAAA--VENSDWVVLRE---GEQKFVGYDY--------TEYEC----- 489
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
H +R+ + + + N + L+ D T Y GGQI D GV
Sbjct: 490 --------------HILRYRK-------VTQKKNTFYELVLDHTPFYGEMGGQIGDQGV- 527
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHF-----GNVVSSFKVTPGLTSRVEVDARMRLGCM 646
E+ ++I + + +H NV + F VD R
Sbjct: 528 ----LVSEDETIDIVDTKRENNQSIHIVKQLPKNVEADFMAC--------VDTDKRDASA 575
Query: 647 RAHTTSHLLNAALRRVLT--CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
HT +HLL+ AL++VL C QK V D DFS + + ++ + + VE+ +ND+
Sbjct: 576 ANHTATHLLDYALKQVLGEHCE-QKGSYVSPDTLRFDFSHF-QKVTDEELRQVERLVNDM 633
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNT 764
I E + GE Y D V +I S E C G H +T
Sbjct: 634 IRQDFPCGEYRDTPLEEAKEMGAVALFGEKYGDKVRVIKFGP-----SCEFCGGIHATST 688
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTG 790
G I +I S GVR I+ LTG
Sbjct: 689 GRIGFFKIISESSVAAGVRRIEALTG 714
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 63/98 (64%), Gaps = 3/98 (3%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRV-ANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
D ++ F N+GM Q+K++ LG T P PR +SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 35 DPTLMFTNAGMNQWKDIILG-TKDPEPRRRTDSQKCLRVSGKHNDLEEVGHDTYHHTMFE 93
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K A A E+L P D LY T
Sbjct: 94 MLGNWSFGDYFKEGAIDYAWEYLVDVLKLNPAD-LYVT 130
>gi|308509732|ref|XP_003117049.1| CRE-AARS-1 protein [Caenorhabditis remanei]
gi|308241963|gb|EFO85915.1| CRE-AARS-1 protein [Caenorhabditis remanei]
Length = 810
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 246/813 (30%), Positives = 402/813 (49%), Gaps = 88/813 (10%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDS-IAFVNSGMCQFKNVFLGLTPAPYPRV 72
S+ +R SF ++F ++ H ++KS+ ++P +DS + F N+GM QFK + L + + RV
Sbjct: 13 SRELRKSFFEFF-KSKNHEILKSASVIPAENDSSLLFTNAGMNQFKPLIL--SSSEPKRV 69
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYY-KRDACRMALEFLTKPPVS 131
AN QKC+R GGKHNDL G+D +H TFFEM+GNWSFND + K++AC+ A ++L K +S
Sbjct: 70 ANIQKCIRAGGKHNDLDDVGKDLHHQTFFEMMGNWSFNDAFSKQEACQFAWDYLVKT-LS 128
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ DRLY +YFGG ++ GLP D E R+IW +G+P D I + NFWEMGS GPCG
Sbjct: 129 IDSDRLYVSYFGGIERLGLPEDRECREIWKRIGIPSDRILP-FVAENFWEMGSAGPCGPC 187
Query: 192 SEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
+EIHYD + G +S+L VN D + ++EIWNIVF+S+ R S+ I L KN+IDTG+GFE
Sbjct: 188 TEIHYDRIGGRNASSL--VNID-DSVVEIWNIVFMSNIRDSSGHIHNLGKNHIDTGMGFE 244
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAK-PYGRTFTTSNRTDLDTSYRMLSDYSRM 309
RL++++QN+ S +DTD F P+L+ I ++ K Y T ++ D +R+++D+ R
Sbjct: 245 RLLSVVQNRNSNFDTDAFTPILDKITSLTKNKLKYNGTLSSRE----DAVFRLVADHVRA 300
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL------ 360
TVA++D PD T +R ++R + L +++ L + I+ ++
Sbjct: 301 ATVAISDGAIPDGTGSGFIVRKMMRRSFLQGNSKLGIERFGLSDLVPVVISTMVPFLVRI 360
Query: 361 ---GDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGL 417
+VYPEI+ S N+I +E F WK + K
Sbjct: 361 TSDKEVYPEIEKSSNEIIKTFKDEETQF----------WKTVDKA--------------- 395
Query: 418 VLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLN 477
K + +A + ISG AF L++T+GL ++ E+A + + FE+
Sbjct: 396 ----KKMFDGVANENKSPVISGRKAFNLFETHGLPLSVTVEMARNIGKEVDEKEFERCQL 451
Query: 478 ELKERSKAKAASNVPDIDLMDLKHFPV--TDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
E ++ S+ + +P + FP +DKY Y Y K +F + N + +
Sbjct: 452 EAQKLSQKASQLKLP----VSASDFPTHTDNDKYSYTYKNGRYGKSISFTLTNFNYLFL- 506
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
+ + + ++ + + +V + + Y GGQ D G +
Sbjct: 507 ---EFPKVQTRILEVYKNQEKANCLNENEKGFV--VLENCQFYGEQGGQTSDTGKLLIDK 561
Query: 596 T----TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTT 651
+ K+E G + L G+ + + L ++D + R G M+AH+
Sbjct: 562 KEIFEVESAKKLENGAVTVLFGRALQ--------PIQRDLRVEQQLDEKKREGVMKAHSA 613
Query: 652 SHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAV----EKYINDVIAN 707
+HLLN AL++ QK V + D+S + + + + V E+ +N+ I +
Sbjct: 614 THLLNWALQKSGLGCGQKGSSVDCNRLRFDYSTKDDVMEKEQRSEVLKQGEERMNEFIRH 673
Query: 708 QVQVDRRHMRASELPFLTHLT--VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTG 765
+ E + +L V I V ++ + +V E C GTHV +
Sbjct: 674 GGETIILETTIEEAKKIENLQSDVKEDRIGNSTVRVVSLGIGRDV-PVECCSGTHVHDVK 732
Query: 766 HIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVE 798
IE ++ KS +R I +TG+ ++ E
Sbjct: 733 VIEDIAIMSDKSMGQRLRRIIAVTGEEAQKCRE 765
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 70/99 (70%), Gaps = 4/99 (4%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D S+ F N+GM QFK + L + + RVAN QKCIR GGKHNDL G+D +H TFFEM
Sbjct: 43 DSSLLFTNAGMNQFKPLIL--SSSEPKRVANIQKCIRAGGKHNDLDDVGKDLHHQTFFEM 100
Query: 882 LGNWSFNDYY-KRDACRMALEFLTKPPVSLPLDRLYFTF 919
+GNWSFND + K++AC+ A ++L K +S+ DRLY ++
Sbjct: 101 MGNWSFNDAFSKQEACQFAWDYLVK-TLSIDSDRLYVSY 138
>gi|385208723|ref|ZP_10035591.1| alanine--tRNA ligase [Burkholderia sp. Ch1-1]
gi|385181061|gb|EIF30337.1| alanine--tRNA ligase [Burkholderia sp. Ch1-1]
Length = 874
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 253/809 (31%), Positives = 389/809 (48%), Gaps = 134/809 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG PY R
Sbjct: 1 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAESRPYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HHTFFEMLGN+SF DY+KRDA A E LT
Sbjct: 60 ATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLT-GVYQ 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP D+L+ T + D+E DIW E+GVP + I + G NFW+M
Sbjct: 119 LPKDKLWVTVY--------HEDDEAHDIWAKEVGVPVERIIRIGDNKGARYASDNFWQMA 170
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG SEI YD G P S D + IEIWN+VF+ R + + PL
Sbjct: 171 DTGPCGPCSEIFYDHGPDVWGGPPGSP----EEDGDRYIEIWNLVFMQFNRDAQGNMTPL 226
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S Y+ DLF L++ + A+ G + T+N
Sbjct: 227 PKQCVDTGMGLERIAAVLQHVHSNYEIDLFQALIK-----AAARETGVSDLTNN------ 275
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELSY 354
S ++++D+ R + + D + P + LR +VR A+ +K+ K+G +
Sbjct: 276 SLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAI---RHGYKLGKKGSFFHRMVA 332
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
++ +G YPE++D+ E R+ D LR Q E F +E
Sbjct: 333 DLVAQMGAAYPELKDA----------EQRVTDVLR-------------QEEERFFETIEH 369
Query: 415 PGLVLGVKYLTKQLAR--DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF 472
G+ L LA S + G++AF L+DTYG ++ ++ +++T+ AF
Sbjct: 370 -----GMSILEGALAELEAGSSKTLDGELAFKLHDTYGFPLDLTADVCREREVTVDEAAF 424
Query: 473 EQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
++ + ++R +A+AA K+K + + ++ TF
Sbjct: 425 DEAMT--RQREQARAAG------------------KFKMAQGLEYSGEKTTFHGY----- 459
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV-- 590
D++ D I GAS+ A V + D T YA +GGQ+ D GV
Sbjct: 460 -----DEIVFDDAKVIALYVEGASVQQASQGQQAVV--VLDHTPFYAESGGQVGDQGVLA 512
Query: 591 -AYLTNTTQENGKVE---IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCM 646
A + + KV+ +G +LE + G+VV + E+DA R
Sbjct: 513 NASVRFAVSDTLKVQADVVGHHGTLEQGTLKVGDVV-----------KAEIDAVRRARTA 561
Query: 647 RAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DV 704
R H+ +HL++ ALR VL T QK V +D+ DF+ + L+ + + VE+ +N +V
Sbjct: 562 RNHSATHLMHKALREVLGTHVQQKGSLVDADKTRFDFA-HNAPLTDEQIRRVEEIVNAEV 620
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNT 764
+AN + R + + + + GE Y D+V ++D+ SRE C GTHV T
Sbjct: 621 LANAPGIVR--VMSFDEAVKGGAMALFGEKYGDEVRVLDLG-----FSRELCGGTHVHRT 673
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
G I ++ G+R ++ +TGD++
Sbjct: 674 GDIGLFKIVMEGGVAAGIRRVEAITGDNA 702
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG PY R +Q+ +R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLLFTNSGMVQFKDVFLGAESRPYSRATTAQRSVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA A E LT LP D+L+ T
Sbjct: 88 FFEMLGNFSFGDYFKRDAIHYAWELLT-GVYQLPKDKLWVT 127
>gi|126735784|ref|ZP_01751529.1| alanyl-tRNA synthetase [Roseobacter sp. CCS2]
gi|126714971|gb|EBA11837.1| alanyl-tRNA synthetase [Roseobacter sp. CCS2]
Length = 885
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 250/797 (31%), Positives = 367/797 (46%), Gaps = 111/797 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FL+YF QGH +V SSP+VP D ++ F NSGM QFKN+F G+ Y R SQ
Sbjct: 7 IRSTFLNYF-GKQGHAIVASSPLVPRNDPTLMFANSGMVQFKNLFTGVETRDYTRATTSQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K +A A E LTK + DR
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKAEAIAFAWELLTKD-FGIDKDR 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
L T + D+E DIW ++ G+P D I + NFW MG TGPCG +EI
Sbjct: 125 LLVTVY--------HTDDEAADIWKKVAGLPDDRIIRIPTDDNFWRMGPTGPCGPCTEIF 176
Query: 196 YD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
YD G P S D + IEIWNIVF+ +++ ++ PL IDTG+G E
Sbjct: 177 YDHGDHIWGGPPGSP----EEDGDRFIEIWNIVFMQNEQFDDGSLKPLEMQSIDTGMGLE 232
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +LQ K YDTDL L+E + + P G +T +R+++D+ R
Sbjct: 233 RIGALLQGKHDNYDTDLMRALIEASADATSSDPDGPG---------NTHHRVIADHLRST 283
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+ +A+ + P + LR ++R A+ + + + ++ L + + +G YPE+
Sbjct: 284 SFLIAEGVLPSNEGRGYVLRRIMRRAMRHAHQLGG--KDPVMHRLVPALVQQMGAAYPEL 341
Query: 368 QDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
I+ +L EE R L + G+K L +
Sbjct: 342 GQGQRLIEETLLNEEVRFKQTLDR-----------------------------GLKLLDE 372
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
+L P + G AF LYDTYG ++ Q+ K + + F+ + E K +++A
Sbjct: 373 ELQNLPDDAALPGTAAFKLYDTYGFPLDLTQDALREKGREVDTDGFDAAMAEQKAKARAA 432
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
+ D F +TD+ D+ YDT + L +V GD+
Sbjct: 433 WSGTGEAAD--SAIWFNITDESGATDFLGYDTLTAEGQIMAL------VVDGDRA----D 480
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
HA + V ++ ++T YA AGGQ+ D G E GK EI
Sbjct: 481 HA-----------------DGAVQIVLNQTPFYAEAGGQVGDAGT-----LRTETGKAEI 518
Query: 606 GELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT- 664
+ VHF V + G + + VD R H+ +HLLN ALR VL
Sbjct: 519 TDTKKFGEIHVHFAKVTEG-HLHKGQGAELAVDPVRRANIQANHSATHLLNEALRAVLGD 577
Query: 665 CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFL 724
Q+ D DFS + + L+ +A +++ +N +I V+ R M + L
Sbjct: 578 HIAQRGSLNGPDRLRFDFS-HTKALNDAELAQIDRDVNAIIRQNSPVETRIMTPDDARGL 636
Query: 725 THLTVIPGEIYPDDVILIDISDKE--------NVISREPCCGTHVFNTGHIESCTVIGYK 776
+ GE Y D+V ++ + +E N S E C GTHV G I + +G
Sbjct: 637 GAQALF-GEKYGDEVRVVSMGRQEGSGKGMGGNTYSLELCGGTHVKQLGEIGAFVTLGDS 695
Query: 777 SYNHGVRSIKCLTGDSS 793
+ + GVR I+ LTG ++
Sbjct: 696 ASSAGVRRIEALTGQAA 712
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFKN+F G+ Y R SQKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFANSGMVQFKNLFTGVETRDYTRATTSQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K +A A E LTK + DRL T
Sbjct: 89 FFEMLGNFSFGDYFKAEAIAFAWELLTK-DFGIDKDRLLVT 128
>gi|374597103|ref|ZP_09670107.1| alanyl-tRNA synthetase [Gillisia limnaea DSM 15749]
gi|373871742|gb|EHQ03740.1| alanyl-tRNA synthetase [Gillisia limnaea DSM 15749]
Length = 881
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 257/814 (31%), Positives = 382/814 (46%), Gaps = 132/814 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ SK IRS++L++F ++ H LV S+P+V D S+ F N+GM QFK FLG T + R
Sbjct: 1 MKSKEIRSTYLEFF-KSKSHVLVPSAPMVIKDDPSLMFTNAGMNQFKEYFLGNTTPKFSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFND-----------YYKRDACRM 120
++QKC+RV GKHNDL G D+YHHT FEMLGNWSF + Y+K++A
Sbjct: 60 ATDTQKCLRVSGKHNDLEEVGMDTYHHTMFEMLGNWSFGNPEGKQINGVGGYFKKEAIHW 119
Query: 121 ALEFLTKPPVSLPLDR--LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCN 178
A E LT+ +D+ LY + F GS+ L D E D+W + VP D I K N
Sbjct: 120 AWELLTE---VFKIDKSILYVSVFEGSEDDKLEMDSEALDLWKAI-VPEDRIIYGNKKDN 175
Query: 179 FWEMGSTGPCGYSSEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADT 234
FWEMG GPCG SSEIH D++ + A VNAD ++EIWN+VFI R + +
Sbjct: 176 FWEMGDQGPCGPSSEIHVDIRSDAEKARVPGRDLVNADHPQVVEIWNLVFIEFNRKADAS 235
Query: 235 IVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRT 294
+ L ++DTG+GFERL +LQNK S YDTD+F PL++ IEKV+ ++ YG+ +++T
Sbjct: 236 LEKLPARHVDTGMGFERLCMVLQNKKSNYDTDVFTPLIQQIEKVTNSQ-YGK----NDKT 290
Query: 295 DLDTSYRMLSDYSRMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKEL 352
D+ + R+++D+ R +T ++AD P T + + + F + + +L
Sbjct: 291 DI--AIRVIADHVRAVTFSIADGQLPSNTGAGYVIRRILRRAIRYGFTFLDTKEPFIYKL 348
Query: 353 SYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIM 412
++ +G+ +PE+ + ++ EE + F LR
Sbjct: 349 IETLSSQMGEAFPELMSQKTLCENVIREEEQSF--LRT---------------------- 384
Query: 413 EEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF 472
L LG+ L + P T +SG AF LYDT+G ++ + + L + F
Sbjct: 385 ----LDLGLVLLDNIIEVTPGKT-VSGKKAFELYDTFGFPIDLTALILRERGYYLDEKEF 439
Query: 473 EQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
+L K++ +++AAS V D+ + F D
Sbjct: 440 NAELQ--KQKVRSRAASVV-----------------ISGDWQILGKEEGVPFIGYDAMEA 480
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--- 589
+ I IR S + Q L+F+KT Y GGQ+ D G
Sbjct: 481 DVKI---------TRIRKVESKKEGELYQ--------LVFNKTPFYPEGGGQVGDKGSLI 523
Query: 590 -----VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTS---RVEVDARM 641
+ + +T +EN I+HF K P TS + +V+
Sbjct: 524 APDEKIIKILDTRKEN------------NLIIHFT------KKLPSDTSAILKTQVNKTK 565
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
RL H+ +HLL+ ALR L QK V SD DFS + + LS + + VE +
Sbjct: 566 RLQTQANHSATHLLHQALRIFLGDHVEQKGSMVSSDHLRFDFSHFSK-LSSEELKQVEDF 624
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+ND I Q+ + + A + + GE Y D V I D S E C GTH
Sbjct: 625 VNDKIREQLPLIEQRNMAFQEALDQGAIALFGEKYGDSVRAIKFGD-----SMELCGGTH 679
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSK 794
V NTG I +I + G+R I+ +TGD+ K
Sbjct: 680 VQNTGDIWFFKIISEGAVAAGIRRIEAITGDAVK 713
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 59/95 (62%), Gaps = 11/95 (11%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D S+ F N+GM QFK FLG T + R ++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPSLMFTNAGMNQFKEYFLGNTTPKFSRATDTQKCLRVSGKHNDLEEVGMDTYHHTMFEM 91
Query: 882 LGNWSFND-----------YYKRDACRMALEFLTK 905
LGNWSF + Y+K++A A E LT+
Sbjct: 92 LGNWSFGNPEGKQINGVGGYFKKEAIHWAWELLTE 126
>gi|66911311|gb|AAH97014.1| Zgc:113920 [Danio rerio]
gi|213624850|gb|AAI71667.1| Zgc:113920 protein [Danio rerio]
gi|213624852|gb|AAI71669.1| Zgc:113920 protein [Danio rerio]
Length = 433
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/382 (45%), Positives = 235/382 (61%), Gaps = 12/382 (3%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + H V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAAQIREKFIDFFRRHE-HQYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 ARLRRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKHLACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG GL D E + IWL+LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYFGGHADAGLEPDLECKQIWLDLGMEESRILPGSMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI R S + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNMDDPNVLEIWNLVFIQFNRESETVLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+ Y + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARAYTGKVGAEDTDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+AL+D PD T + LR ++R A+ S + ++G L + E LGD
Sbjct: 302 ARTITIALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQRG-FFASLVDVVVESLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIF 385
+PE++ + ++ I+ EE F
Sbjct: 361 FPELRKDPDMVKDIINEEEAQF 382
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMARLRRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKHLACKMALELLTQ-EFGIPIERLYVTY 137
>gi|159473717|ref|XP_001694980.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276359|gb|EDP02132.1| predicted protein [Chlamydomonas reinhardtii]
Length = 750
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 243/792 (30%), Positives = 366/792 (46%), Gaps = 90/792 (11%)
Query: 18 RSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRV 72
R++F ++F T+GHT SS +VP+ D ++ F N+GM QFK VFLG R
Sbjct: 6 RAAFNEFF-ETKGHTYWASSSVVPHNDPTLLFTNAGMNQFKPVFLGTVDPNSDMGKMKRA 64
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK---PP 129
NSQKC+R GGKHNDL G+D YHHTFFEMLGN + Y C AL + P
Sbjct: 65 CNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNCACGRY----PCTQALLLIAHARLPL 120
Query: 130 VSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
LP +RLY TYF G GLP D+E R+IWL +P + G K NFWEMG GPCG
Sbjct: 121 ALLPAERLYATYFRGDPAMGLPADDEAREIWLRF-LPESRVLPYGNKENFWEMGDQGPCG 179
Query: 190 YSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
+EIH+D G +A A VNAD +++EIWN VFI R ++ L ++DTG+G
Sbjct: 180 PCTEIHFDRIGGRDAA-ALVNADDPNVLEIWNNVFIQFNREPDGSLKSLPAKHVDTGMGL 238
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ER+ ++LQ K S Y TDLF P+ + I+ V+GA+ Y + +D +YR+++D+ R
Sbjct: 239 ERITSVLQGKMSNYATDLFGPIFDAIQAVTGARDYTDKIGKDDSDGVDMAYRVVADHIRT 298
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
++ ++AD P + LR ++R A+ + K+G + +A G +PE
Sbjct: 299 LSFSIADGARPGNEGRDYVLRRILRRAVRYGREKLGAKEGFFAGLVDVVVAH-FGGFFPE 357
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ + I +L EE F + L+K +E+F K
Sbjct: 358 LVKQRDTIFGVLREEEAAFS----------RTLIKG---IERF----------------K 388
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
+ A + +I G AF L+DT+G ++ Q +A + + + +E + E +E+
Sbjct: 389 KAAAGATDGKIPGPEAFVLWDTFGFPVDLTQLMAEERGMAVDMAGYEAAMAEAREKMGET 448
Query: 487 A---------ASNVPDIDLMDLKHFPVTDDKYKYDYHYD--TNSKRYTFPCLDTNLVGIV 535
AS++ L + D ++ +Y + ++ I+
Sbjct: 449 GRHGGFHHGVASSMVCAKLHGTYTGATVNSIPISPPPPDWQNDAPKYGSADVSAKVLAIL 508
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
SG Q VGL+ D T+ YA +GGQ LT
Sbjct: 509 T----------------SGGFAAGSQEAEGGLVGLVLDTTSFYAESGGQHFSPSPELLTK 552
Query: 596 TTQENGKVEIGELASL-EGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
+ + E+ ++ G ++H G V +V G V VD R HT +H+
Sbjct: 553 FSSPSTSPELLTNPTVAAGYVLHVGEVAEGGQVAVGEAVTVSVDYERRGLIKPNHTFTHV 612
Query: 655 LNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
LN AL+ VL QK V D+ DFS G + +AAVEK + +A + V
Sbjct: 613 LNYALKSVLGDHVDQKGSIVLPDKLRFDFSNAG-PVEAAQLAAVEKICREAVAAAMPVFG 671
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDI------------SDKENVISREPCCGTHV 761
+ ++ + L + GE+YPD V ++ I +D S E C GTH+
Sbjct: 672 TEVPLAQAKSINGLRAVFGEVYPDPVRVVSIGRSVADLLADPKADANAAYSIEFCGGTHL 731
Query: 762 FNTGHIESCTVI 773
NT E+ ++
Sbjct: 732 ANTQEAEAFALL 743
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 66/120 (55%), Gaps = 16/120 (13%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P+ D ++ F N+GM QFK VFLG R NSQKCIR GGKHNDL G+D
Sbjct: 27 VPHNDPTLLFTNAGMNQFKPVFLGTVDPNSDMGKMKRACNSQKCIRAGGKHNDLDDVGKD 86
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTK---PPVSLPLDRLYFTF----PMVMIP 925
YHHTFFEMLGN + Y C AL + P LP +RLY T+ P + +P
Sbjct: 87 VYHHTFFEMLGNCACGRY----PCTQALLLIAHARLPLALLPAERLYATYFRGDPAMGLP 142
>gi|315125679|ref|YP_004067682.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
gi|315014193|gb|ADT67531.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
Length = 866
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 257/812 (31%), Positives = 382/812 (47%), Gaps = 118/812 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FLD+F + Q H +V SS ++P D ++ F N+GM QFK+VFLG PY R
Sbjct: 4 MTTAQIRQQFLDFFASKQ-HQVVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA + A EFLT+ V
Sbjct: 63 ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVK 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L T + DEE W ++G+P D I + NFW MG TGPCG
Sbjct: 122 LPKEKLLVTIY--------HDDEEAFGYWANDIGLPEDRIIRIATSDNFWSMGDTGPCGP 173
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI YD G P + D + IEIWN+VF+ + R S T+ PL K +DT
Sbjct: 174 CSEIFYDHGEHIWGGPPGTP----EEDGDRFIEIWNLVFMQYNRQSDGTMEPLPKQSVDT 229
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ILQ S Y+ DLF L+ V+ A+ D S R+++D
Sbjct: 230 GMGLERISAILQGVHSNYEIDLFQGLIAAAASVTNAQDMD-----------DKSLRVVAD 278
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R ++D + P + LR ++R A+ + +G +L + E +G
Sbjct: 279 HIRSCAFLISDGVMPSNEGRGYVLRRIIRRAVRHGNKLG--AKGAFFYKLVAALIEQMGQ 336
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ +L RI E EQF E GL +
Sbjct: 337 AYPELAKQQEIIEKVL----RI--------------------EEEQFGKTLERGLAI--- 369
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L + L+ D + I GD+ F LYDTYG ++ ++A +++T+ H+ FE + +R
Sbjct: 370 -LEESLS-DLTGDVIPGDLVFKLYDTYGFPADLTADVARERQMTIDHQGFEACM--AVQR 425
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT-FPCLD-TNLVGIVIGDQV 540
A+ A K+ DY+ S ++T F D T+ G V+ ++
Sbjct: 426 KTAQQAG------------------KFGADYNDQLKSDKHTDFKGYDSTHYSGTVV--EI 465
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLI-FDKTNLYATAGGQIDDIGVAYLTNTTQE 599
F A +++ L + G+I D+T YA +GGQI D G T
Sbjct: 466 F-------------AGGEAVSLLEDGQQGIIVLDRTPFYAESGGQIGDSG-----TITVA 507
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAAL 659
G+ + L H G V V + + ++ DAR R + HT +H+L+ AL
Sbjct: 508 GGEFVVTNTTKLGNAFAHHGTVQGRIGVNDKVDATID-DAR-RDSIKKNHTATHILHEAL 565
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R++L QK V D DFS + E ++ + +E+ +ND I ++ M
Sbjct: 566 RQLLGEHVSQKGSLVQPDRLRFDFSHF-EAVTKQELREIERVVNDEIRRNFALNTELMAI 624
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ + + GE Y D+V ++ I D S E C GTHV G I ++
Sbjct: 625 DDAKAKGAMALF-GEKYDDEVRVVTIGD----YSIELCGGTHVERAGDIGLFKIVSESGI 679
Query: 779 NHGVRSIKCLTGDSSKAAV-ENGKHLSTAASF 809
GVR I+ +TG + A V E + L+ A+
Sbjct: 680 AAGVRRIEAVTGAEAIAYVSEQEQQLADVAAL 711
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 31 IPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQRCVRAGGKHNDLENVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K+DA + A EFLT+ V LP ++L T
Sbjct: 91 FFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVKLPKEKLLVTI 131
>gi|163786078|ref|ZP_02180526.1| alanyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
gi|159877938|gb|EDP71994.1| alanyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
Length = 870
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 256/800 (32%), Positives = 372/800 (46%), Gaps = 114/800 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IRS FL++F Q H +V S+P+V D ++ FVNSGM FK FLG R
Sbjct: 1 MKSQEIRSKFLNFFEGKQ-HLIVPSAPMVLKDDPTLMFVNSGMAPFKEYFLGNADPKKNR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 IADSQKCLRVSGKHNDLEEVGYDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLTE-VYG 118
Query: 132 LPLDRLYFTYFGGS-DQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+ D LY T F GS D L D+E D+W E +P D I K NFWEMG GPCG
Sbjct: 119 IDKDMLYVTVFEGSNDADNLKMDQEAYDLWKEF-IPEDRILMGNKKDNFWEMGDQGPCGP 177
Query: 191 SSEIHYDMKGEPSSA----LARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH D++ E + + VN D ++EIWN+VF+ + R + ++ L +IDTG
Sbjct: 178 CSEIHVDIRSEEEKSKVDGKSLVNMDHPQVVEIWNLVFMQYNRKANKSLETLPNKHIDTG 237
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERL +LQ S YDTD+F P++ IE ++ K YG+ +D + R++SD+
Sbjct: 238 MGFERLCMVLQGVQSNYDTDVFTPIIREIEAIT-HKDYGKD------EKVDVAIRVISDH 290
Query: 307 SRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R + ++AD P A +R ++R A+ F K+ + L +++ +G
Sbjct: 291 VRAVAFSIADGQLPSNNGAGYVIRRILRRAVRYGF-TFLDKKEPFIYRLVNILSKKMGKA 349
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE++ I+ ++ EE F LR LEQ GLV
Sbjct: 350 FPELKAQKQLIENVIKEEESSF--LRT---------------LEQ-------GLV----- 380
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + + EISG F L DTYG +++ + K T E F+ L ++R
Sbjct: 381 LLDGIVKTSKTKEISGSKVFELKDTYGFPEDLTDLILREKGYTYNAEEFKTSLKAQQDR- 439
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+ AS + D L H V + F DT + I
Sbjct: 440 -GREASELKSDDWTILHHDEVEE-----------------FIGYDTLEAHVKI------- 474
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTN 595
R+ + + D + L+F+ T Y GGQ+ D G V Y+ +
Sbjct: 475 ----TRYRKVTSKKDGEMYQ------LVFNITPFYPEGGGQVGDKGYLEDEHGDVVYILD 524
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T +EN I+HF + L + V++ R R C HT +HLL
Sbjct: 525 TKKEN------------NLIIHFTKNLPKHS-DEVLKAVVDIKQRYRTEC--NHTATHLL 569
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
+ ALR VL QK V S DFS + + L+++ + VE ++N I ++ ++
Sbjct: 570 HQALREVLGDHVEQKGSAVHSKHLRFDFSHFSK-LTLEELRDVENFVNSRIEGKLPLEEN 628
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
E + GE Y D+V I S E C GTHV NT I +
Sbjct: 629 RSVPKEQAIADGAMSLFGEKYGDNVRTIRFGQ-----SIELCGGTHVNNTADIWHFKITS 683
Query: 775 YKSYNHGVRSIKCLTGDSSK 794
+ G+R I+ +T D+ K
Sbjct: 684 ESAVASGIRRIEAITNDAVK 703
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ FVNSGM FK FLG R+A+SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFVNSGMAPFKEYFLGNADPKKNRIADSQKCLRVSGKHNDLEEVGYDTYHHTLFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ + D LY T
Sbjct: 92 LGNWSFGDYFKKEAIAWAWELLTE-VYGIDKDMLYVT 127
>gi|399926850|ref|ZP_10784208.1| alanyl-tRNA ligase [Myroides injenensis M09-0166]
Length = 875
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 248/795 (31%), Positives = 374/795 (47%), Gaps = 100/795 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FL++F +GH +V S+PIV D ++ F NSGM QFK FLG R
Sbjct: 1 MKSQEIRQKFLNFF-EERGHMIVPSAPIVLKDDPTLMFNNSGMAQFKEYFLGNAKPKSNR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ ++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 ITDTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAINWAWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P D LY T F GS++ +P D+E DIW L V +D I K NFWEMG GPCG
Sbjct: 119 IPKDILYVTVFEGSEEENVPFDQEAYDIWSTL-VDKDRILMGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPSSALAR----VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
+EIH D++ E A VN D ++EIWN VF+ R + ++ L ++DTG+
Sbjct: 178 TEIHVDIRSEEEKAKIAGRDLVNGDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ S YDTD+F PL+ + +++G K Y ++ + R++ D+
Sbjct: 238 GFERLCMVLQGVQSNYDTDVFSPLIAKVSELAGGK-YTIKAANEEEEKINIAIRVIVDHV 296
Query: 308 RMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R + A+AD P + + + + F K+ + EL ++ +GD +P
Sbjct: 297 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYAFTFLDKKEPFIYELVDVLSTQMGDFFP 356
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
EI ++ ++ EE F LR LEQ GL +L
Sbjct: 357 EITSQKELVKNVIREEEASF--LRT---------------LEQ-------GL-----HLL 387
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+ + +SG AF LYDT+G ++ + K L F+ + E K RS+A
Sbjct: 388 DNVIKHTEGKVVSGVKAFELYDTFGFPIDLTALILREKGYELDEAGFDAAMLEQKTRSRA 447
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
+ + D ++ P +++ + K + +D+ G ++F I
Sbjct: 448 ASEVSTDDWTVL----IPGNVEQFVGYDQLENEVKITRYRKVDSKKDG-----KLFQI-- 496
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
+ D T Y GGQ+ D GV N +E+
Sbjct: 497 -------------------------VLDTTPFYPEGGGQVGDSGV-----LVSANDMIEV 526
Query: 606 GELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-T 664
+ I+H + S V L ++V VDAR + M H+ +HLL+ ALR +L T
Sbjct: 527 IDTKKENNLILHIVRELPS-NVEATLIAKVNVDARKQ--SMANHSATHLLHQALRSILGT 583
Query: 665 CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ-VDRRHMRASELPF 723
QK V DFS + + ++ + +A VE ++ND I Q+ V+RR +PF
Sbjct: 584 HVEQKGSLVSPTHLRFDFSHFAK-VTEEELAEVEAFVNDRIHEQLPLVERR-----SIPF 637
Query: 724 LTHL----TVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
+ + GE Y D+V I D S E C GTHV NT I ++ +
Sbjct: 638 AQAIEEGAMALFGEKYGDEVRAIRFGD-----SMELCGGTHVANTADIWQFKIVSEGAVA 692
Query: 780 HGVRSIKCLTGDSSK 794
G+R I+ +T +++
Sbjct: 693 AGIRRIEAITNKAAR 707
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK FLG R+ ++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFNNSGMAQFKEYFLGNAKPKSNRITDTQKCLRVSGKHNDLEEVGIDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ +P D LY T
Sbjct: 92 LGNWSFGDYFKKEAINWAWELLTE-VYKIPKDILYVT 127
>gi|206602304|gb|EDZ38785.1| Alanyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
Length = 891
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 260/791 (32%), Positives = 381/791 (48%), Gaps = 102/791 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S +R FL YF N GH +V S+ ++P GD ++ F N+GM FK++FLG R
Sbjct: 1 MNSWELRQKFLLYF-NGSGHDVVPSASLIPAGDPTLLFTNAGMVPFKDIFLGAEKTTRKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ QKCVR GGKHNDL G HHTFFEM+GN+SF DY+K++A A FLTK
Sbjct: 60 AVSIQKCVRAGGKHNDLDRVGFTRRHHTFFEMMGNFSFGDYFKKEAISFAWTFLTK---E 116
Query: 132 LPLDR--LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPC 188
L +DR L+ T + D+E +W E+ V D I + G K NFW+MG TGPC
Sbjct: 117 LGMDRRLLWVTVY--------REDDEAERLWREVTDVLPDRIVRLGEKDNFWQMGDTGPC 168
Query: 189 GYSSEIHYDMKGEP---SSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
G SEI D +GE S +V D + +EIWN+VF+ + R S + PL + IDT
Sbjct: 169 GPCSEILVD-QGERFSCGSPDCKVGCDCDRYLEIWNLVFMQYDRNSEGVLSPLPRPSIDT 227
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ERL ++Q K S Y+TDLF+PL+ TIE S PYG + LD +YR+++D
Sbjct: 228 GMGLERLSAVIQKKDSNYETDLFMPLIRTIETYSRV-PYG-----AGEGSLDHAYRVMAD 281
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R L + + P + LR ++R ALL ++ ++ L+ ++AE++
Sbjct: 282 HLRSSVFLLHEGIAPSNEGRGHVLRRIIRRALLFGRELGLPH--PILPALADSVAEMMAK 339
Query: 363 VYPEIQDSINKIQLILG-EESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
YPE++ S+ +IQ +L EE R L PLV+ E +E+
Sbjct: 340 PYPELRTSLLRIQDVLRLEEGRFHQTLESGL-----PLVQ-----EMLRTLEK------- 382
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
KQ P G+M F L+DT+G +I+++ A + + L ++ FE+K+ E +E
Sbjct: 383 ----KQEKVFP------GEMLFLLHDTHGFPLDIVEDAAKMQGILLDYKGFEEKMEEQRE 432
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
R ++ D FP++ D+ K + K T+L G V+
Sbjct: 433 RGRSSWTGKKED--------FPLSSDRLKESVEFQGYEK--------TSLQGTVL---FL 473
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
K ++ +G S V ++ DKT Y V + + G
Sbjct: 474 LKGKEEVKEVHAGES-----------VLVVLDKTVFYPEG-----GGQVGDVGDLIGPFG 517
Query: 602 KVEI-GELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
+ + G G IV G VVS KV+ G T VD R G R HT +HLL+AALR
Sbjct: 518 YIRVRGAKKPYPGWIVLAGEVVSG-KVSVGETIDQHVDEEARQGSERHHTATHLLHAALR 576
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
VL Q V + DF+ + +S +++ AVE +N I VD R M S
Sbjct: 577 TVLGEQVRQAGSLVAPERLRFDFTCP-QPVSPENLLAVEALVNGWIFRNSPVDAREMEKS 635
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
+ + L E Y D V ++ + S E C GTHV +TG I S ++
Sbjct: 636 KALDMGALAFFD-EKYGDRVRVVQVPG----TSVELCGGTHVRSTGQIGSLLILQETGVA 690
Query: 780 HGVRSIKCLTG 790
G+R I+ + G
Sbjct: 691 AGIRRIEAVAG 701
Score = 106 bits (264), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP GD ++ F N+GM FK++FLG R + QKC+R GGKHNDL G HHT
Sbjct: 28 IPAGDPTLLFTNAGMVPFKDIFLGAEKTTRKRAVSIQKCVRAGGKHNDLDRVGFTRRHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 914
FFEM+GN+SF DY+K++A A FLTK L +DR
Sbjct: 88 FFEMMGNFSFGDYFKKEAISFAWTFLTK---ELGMDR 121
>gi|219847052|ref|YP_002461485.1| alanyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
gi|219541311|gb|ACL23049.1| alanyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
Length = 894
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 258/805 (32%), Positives = 378/805 (46%), Gaps = 97/805 (12%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP 70
+L + IR +F+ +F GHT V SS +V D ++ F NSGM QFK+VFLG PY
Sbjct: 3 KLTAAQIRETFISFF-KRHGHTHVPSSSLVVADDPTLLFANSGMVQFKDVFLGREQRPYT 61
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R +QKC+RV GKHNDL G HHTFFEMLGN+SF DY+K +A R+A + LT+
Sbjct: 62 RAVTAQKCLRVSGKHNDLEEVGPSPRHHTFFEMLGNFSFGDYFKAEAIRLAWKLLTEE-F 120
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP++RL+FT F G D+ +P D+E +W+ G + + G K NFW MG TGPCG
Sbjct: 121 QLPVERLWFTVFAGDDE--VPPDDEAAALWIAQGADPSRVLRFGRKDNFWVMGDTGPCGP 178
Query: 191 SSEIHYDMKGEPSSALAR-VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
SEI + + S A VN+D + +EIWN VF+ + R T+ PL + +DTG+G
Sbjct: 179 CSEITIYIGDDLSQMRAEGVNSDDPNYVEIWNNVFMQYDRA---TMQPLPRPSVDTGMGL 235
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ER+ ++Q STYDTDLF+ ++ I V G+ ++R+ +YR ++D+SR
Sbjct: 236 ERMAMVMQGVHSTYDTDLFVSIINRIIAVRGSD---EEHYQAHRS----AYRAIADHSRA 288
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
I +AD + P + LR ++R A + + + E+ + + +G+VYPE
Sbjct: 289 IAFLIADGVLPGNLGRPYVLRRILRRAAYQGRTIGFER--PFLAEVITTVIDQMGEVYPE 346
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKT-QPELEQFNIMEEPGLVLGVKYLT 425
+ +N+ +LIL AA +E + ++T L + N + E
Sbjct: 347 L---VNRRELIL-----------SAADQEERQFLRTLSGGLSRLNAVIEQ---------- 382
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE-LKERSK 484
R T I G AF L DTYG ++ Q++AA + LT+ +E + E
Sbjct: 383 ---VRTRGETVIPGTDAFVLKDTYGFPLDLTQKIAAEQGLTVDEAGYEAAMAEQRARSRA 439
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
A A + DL P + + Y+ S R T VIG D
Sbjct: 440 AAAGKRGGEADLWAELDLPAS-----HFTGYERLSDRAT-----------VIG---MLAD 480
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
AI A G + ++ D T YA +GGQ+ D GV G V+
Sbjct: 481 GDAITSAMVGRQVQ-----------IVLDTTPFYAESGGQVGDTGV-----LVGPEGSVQ 524
Query: 605 IGELAS-LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
I + L G IVH+G VVS + G + VD R R HT +H+L ALR VL
Sbjct: 525 IEDTRRPLPGLIVHYGRVVSG-TIHVGDQVQATVDMVRRADIQRNHTATHMLQRALRDVL 583
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
Q V D DF+ + + L + + +E+ +N + V R +
Sbjct: 584 GEHAAQAGSLVAPDRLRFDFT-HTKPLDPEELREIERRLNAWVRADASV-RWEITGYRSA 641
Query: 723 FLTHLTVIPGEIYPDDVILIDISDKENVI--------SREPCCGTHVFNTGHIESCTVIG 774
+ GE Y D V ++ I + S E C GTHV TG I ++G
Sbjct: 642 IARGAIALFGEKYGDTVRVVTIERGTGIENGEYASRDSLELCGGTHVNRTGEIGFVRILG 701
Query: 775 YKSYNHGVRSIKCLTGDSSKAAVEN 799
S G+R ++ LTG ++ E
Sbjct: 702 EGSIGSGIRRVEALTGRGAELWAEE 726
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK+VFLG PY R +QKC+RV GKHNDL G HHTFFEM
Sbjct: 35 DPTLLFANSGMVQFKDVFLGREQRPYTRAVTAQKCLRVSGKHNDLEEVGPSPRHHTFFEM 94
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGN+SF DY+K +A R+A + LT+ LP++RL+FT
Sbjct: 95 LGNFSFGDYFKAEAIRLAWKLLTE-EFQLPVERLWFT 130
>gi|294507557|ref|YP_003571615.1| alanyl-tRNA synthetase [Salinibacter ruber M8]
gi|294343885|emb|CBH24663.1| Alanyl-tRNA synthetase, class IIc [Salinibacter ruber M8]
Length = 966
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 260/845 (30%), Positives = 394/845 (46%), Gaps = 109/845 (12%)
Query: 3 NPNISSYV--RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNV 60
NP++ S S+ IR FL +F +GH +V S+ +VP GD ++ F N+GM QFK+V
Sbjct: 7 NPHLQSSADPSRSSEEIRQDFLQFF-QAKGHEVVSSASLVPEGDGTLLFTNAGMNQFKDV 65
Query: 61 FLGLTPAPYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
FLG PY R ++QKC+RV GKHNDL G D+YHHTFFEMLGNWSF DY+K +A R
Sbjct: 66 FLGTGQRPYSRAVDTQKCLRVSGKHNDLEEVGHDTYHHTFFEMLGNWSFGDYFKAEAIRW 125
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNF 179
A E L + L DRLY T G D +GL D E D+WL E +P + + E K NF
Sbjct: 126 AWELLVE-RWGLAPDRLYATVHEGDDDFGLSADAEAYDLWLSETPLPEERVLYEPSKENF 184
Query: 180 WEMGSTGPCGYSSEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSAD 233
W MG TGPCG SE+H D++ P A VN D ++E+WN+VFI + +
Sbjct: 185 WMMGDTGPCGPCSELHVDLR--PPEARQETPGRELVNIDHPQVMELWNLVFIQYNAQTDG 242
Query: 234 TIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNR 293
++ PL ++DTG+GFER+V +LQ K STYDTDLF PLL+ + S + R + +
Sbjct: 243 SLEPLDDQHVDTGMGFERMVAVLQGKESTYDTDLFAPLLQAMADRSPREEI-RGYDDLHI 301
Query: 294 TDLDT------SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVK 344
D D + R+++D+ R I A++D + P + +R ++R A+ +++
Sbjct: 302 EDDDEHEQVRIALRVVADHIRAIAFAISDGVMPSNEGRGYVIRRILRRAVRYGYQTLELE 361
Query: 345 QGKLVKELSYNIAEILG--DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKT 402
+ L + + I ++ G D E Q+ I Q I EE + L ++ ++ +V
Sbjct: 362 EPFLHRLVDPLIEKMGGPFDGLAEQQEFIE--QAIRSEEESFLETL-GTGIEFFERVV-- 416
Query: 403 QPELEQFNIM--EEPGLVLGVKYLTKQ---------------------LARDPSITEISG 439
P + F EE +LG Q AR + G
Sbjct: 417 -PHVTGFQDTDGEESDRLLGALREDAQAMDLLEKAYVDTDDENDILHSFARTARGGTLPG 475
Query: 440 DMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDL 499
+AF L+DTYG ++ + +A + L + E +E ++ +ER A+AAS+ +D D+
Sbjct: 476 QIAFLLHDTYGFPIDLTRLMARERDLDVDMEGYETLMDRQQER--ARAASDFA-VDQSDV 532
Query: 500 KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDS 559
+ + + + +G + +R R + D+
Sbjct: 533 Q----------------------AWQSVSPGEASVFVGYDRAVVPDAEVRAVRVVETGDT 570
Query: 560 IQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFG 619
Q E + +T YA AGGQ+ D G + + V++ + +I H
Sbjct: 571 QQYE------VELSRTPFYAEAGGQVGDTGTLRFGDES-----VQVLDTQREGERIAHTV 619
Query: 620 NVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDEC 678
+ + P VDA R HT +HL++A LR L QK V D
Sbjct: 620 DTLPEPLDGP---VEAAVDAERRNHIRTHHTATHLMHAVLRETLGDHVQQKGSLVAPDRL 676
Query: 679 ALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHL----TVIPGEI 734
DFS + + + D++ +E+ +N I + A ++P L T + E
Sbjct: 677 RFDFSHF-DAVDEDTLRHIERRVNTAIQQNIP----KQEARDVPIDEALDRGATALFDEQ 731
Query: 735 YPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSK 794
Y D V +I S E C GTHV TG I + S GVR ++ + G K
Sbjct: 732 YGDRVRVITFDPD---FSMELCGGTHVDATGEIGLFRFLSEGSVASGVRRVEAVAG---K 785
Query: 795 AAVEN 799
AA+E+
Sbjct: 786 AALEH 790
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P GD ++ F N+GM QFK+VFLG PY R ++QKC+RV GKHNDL G D+YHHT
Sbjct: 45 VPEGDGTLLFTNAGMNQFKDVFLGTGQRPYSRAVDTQKCLRVSGKHNDLEEVGHDTYHHT 104
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DY+K +A R A E L + L DRLY T
Sbjct: 105 FFEMLGNWSFGDYFKAEAIRWAWELLVE-RWGLAPDRLYAT 144
>gi|321496436|gb|EAQ38546.2| Alanyl-tRNA synthetase [Dokdonia donghaensis MED134]
Length = 870
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 243/798 (30%), Positives = 371/798 (46%), Gaps = 111/798 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ +R FL++F ++ H++V S+P+V D ++ F N+GM FK FLG R
Sbjct: 1 MKSQEVRKQFLEFF-KSKNHSIVASAPMVLKDDPTLMFTNAGMVPFKEYFLGNATPKNSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ ++QKC+RV GKHNDL G+D+YHHT FEMLGNWSF DY+K +A A EFLT+ V
Sbjct: 60 LTDTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKEEAIAWAWEFLTEV-VK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ D +Y + F G + GL D+E DIW + + I K NFWEMG+ GPCG
Sbjct: 119 VDKDSIYVSIFEGDESEGLERDQEAYDIWTK-HIDESRIINGNKKDNFWEMGAQGPCGPC 177
Query: 192 SEIHYDMKGEPSSAL----ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ A + VN D +IEIWN+VF+ + R++ ++ L ++DTG+
Sbjct: 178 SEIHVDIRSAEEKAAVDGKSLVNMDHPLVIEIWNLVFMQYNRLANGSLTKLPNQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ S YDTD+F PL+ +E ++ +K G T T D + R+++D+
Sbjct: 238 GFERLCMVLQGVQSNYDTDVFTPLMREVETITSSK-CGETEET------DIAVRVIADHV 290
Query: 308 RMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYP 365
R ++ ++AD P T + + + F + + +L + +GD +P
Sbjct: 291 RAVSFSIADGQLPSNTGAGYVIRRILRRAIRYGFTFLDTKEPFIYKLVSTLVNQMGDAFP 350
Query: 366 EIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLT 425
E++ N I ++ EE F LR + GL+L L
Sbjct: 351 ELEAQKNLITNVIREEEASF--LRTL----------------------DKGLIL----LD 382
Query: 426 KQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKA 485
+A T +SGD AF LYDTYG ++ + + K L L FE L E K+RS+A
Sbjct: 383 NVIANTSGDT-VSGDKAFELYDTYGFPIDLTALILSEKNLKLDEAGFEAALKEQKDRSRA 441
Query: 486 KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
D +++ D+ + + L+ ++
Sbjct: 442 ATKVETDDWNIL----------------QEDSEEEFIGYDTLEASI-------------- 471
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNTT 597
I R S +L L+F+ T Y GGQ+ D G V Y+ +T
Sbjct: 472 -KITRYRKTESKKDGELYQ-----LVFNLTPFYPEGGGQVGDKGYLETPSGEVVYIIDTK 525
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+EN I+H + + T G T + VD + R HT +HLL+
Sbjct: 526 KEN------------NLIIHLAKNLP--RSTEG-TFKAVVDVKQRSRTAANHTATHLLHQ 570
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
LR++L T QK V S DFS + + S + + VE ++N I + ++ +
Sbjct: 571 GLRKILGTHVEQKGSMVHSRNLRFDFSHFSKVTS-EELKEVEDFVNARIRENLSLEEQRG 629
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + GE Y D V I S E C GTHV NTG I +
Sbjct: 630 IPYDQAIQEGAIALFGEKYGDAVRTIRFGK-----SMELCGGTHVKNTGDIWHFKITSEG 684
Query: 777 SYNHGVRSIKCLTGDSSK 794
+ G+R I+ +T D++K
Sbjct: 685 AVASGIRRIEAITSDAAK 702
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM FK FLG R+ ++QKC+RV GKHNDL G+D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMVPFKEYFLGNATPKNSRLTDTQKCLRVSGKHNDLEEVGKDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K +A A EFLT+ V + D +Y +
Sbjct: 92 LGNWSFGDYFKEEAIAWAWEFLTE-VVKVDKDSIYVS 127
>gi|313672790|ref|YP_004050901.1| alanyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
gi|312939546|gb|ADR18738.1| alanyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
Length = 873
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 252/798 (31%), Positives = 384/798 (48%), Gaps = 118/798 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ K IR FL YF GH +V SS +VP D ++ F N+GM QFK++FLGL Y R
Sbjct: 2 ISGKDIREKFLKYF-EKHGHKIVDSSSLVPQNDPTLLFTNAGMNQFKDLFLGLEKREYTR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
QK VR GGKHNDL GR + HHTFFEMLGN+SF DY+K++A A EFLTK +
Sbjct: 61 ATTCQKVVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIEYAWEFLTKE-LG 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLE-LGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L+ + + DEE +IW + +G+P + I + G K NFW MG TGPCG
Sbjct: 120 LPEEKLFVSIYYD--------DEEAFEIWNKVIGIPAEKILRRGEKDNFWSMGDTGPCGP 171
Query: 191 SSEIHYDMKGEPSSALARVN--ADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
SEIH D E N D + +E+WN+VF+ + R + + PL K IDTG+G
Sbjct: 172 CSEIHIDQGPEAGCRKPDCNPDCDCDRHLELWNLVFMQYDRSADGKLTPLPKPSIDTGMG 231
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
ER+ + Q K S YDTDL P++E K++G K YG +N D D S R+++D+SR
Sbjct: 232 LERITAVCQGKLSNYDTDLIKPIIEFTAKLAG-KNYG-----NNEKD-DVSLRVIADHSR 284
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVK---ELSYNIAEI--- 359
T +AD + P + LR ++R A+ + GK++ Y + E
Sbjct: 285 STTFLIADGVIPSNEGRGYVLRRIMRRAM---------RHGKMLGFDGTFFYKVCEFVVD 335
Query: 360 -LGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
+GD Y E++D + I ++ E + F L
Sbjct: 336 FMGDHYIELKDKKDYISKMVAFEEKRFSRT----------------------------LD 367
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
LG+K + + L ++ EISG F LYDTYG +++Q++A L F++++
Sbjct: 368 LGLKLIDELLEKNKDRKEISGSEIFKLYDTYGFPIDLLQDIAEDNGYKLDLMGFDKEMAL 427
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDK-----YKYDYHYDTNSKRYTFPCLDTNLVG 533
+ER+K KH+ + ++ YK H T + Y L + ++
Sbjct: 428 QQERAK---------------KHWVGSGEEKIAEVYKKLSHLKTEFQGYDNHSLSSKILA 472
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
++ + +K ++ + V ++ ++T Y GGQ D G Y
Sbjct: 473 LIENGE----EKQEVQEGKE--------------VDILLEQTPFYPEGGGQQGDTGTIYS 514
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
E+ + IVH +V + G E+D+ R+ R HT++H
Sbjct: 515 REAI-----AEVKDTKKYGNLIVHKA-IVKKGTLKVGENVTAEIDSVKRIATERNHTSTH 568
Query: 654 LLNAALRRVLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
LL+ AL+ VL +++ + +DE DFS + E +S D + +E+ +N +I + V
Sbjct: 569 LLHKALQMVLGDHVRQAGSLVNDEKLRFDFSHF-EAISKDDIIEIERIVNSIIIKNLSVT 627
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
+ M E + + GE Y V ++++SD S+E C G HV NTG I +
Sbjct: 628 KTLMPIEE-AVKSGAMALFGEKYDRIVRVVEVSD----FSKELCGGCHVRNTGEIGFFRI 682
Query: 773 IGYKSYNHGVRSIKCLTG 790
IG S GVR I+ +TG
Sbjct: 683 IGEMSVAAGVRRIEAVTG 700
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK++FLGL Y R QK +R GGKHNDL GR + HHT
Sbjct: 29 VPQNDPTLLFTNAGMNQFKDLFLGLEKREYTRATTCQKVVRAGGKHNDLENVGRTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K++A A EFLTK + LP ++L+ +
Sbjct: 89 FFEMLGNFSFGDYFKKEAIEYAWEFLTK-ELGLPEEKLFVSI 129
>gi|83814294|ref|YP_445665.1| alanyl-tRNA synthetase [Salinibacter ruber DSM 13855]
gi|123528738|sp|Q2S2B6.1|SYA_SALRD RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|83755688|gb|ABC43801.1| alanyl-tRNA synthetase [Salinibacter ruber DSM 13855]
Length = 966
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 260/845 (30%), Positives = 394/845 (46%), Gaps = 109/845 (12%)
Query: 3 NPNISSYV--RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNV 60
NP++ S S+ IR FL +F +GH +V S+ +VP GD ++ F N+GM QFK+V
Sbjct: 7 NPHLQSSADPSRSSEEIRQDFLQFF-QAKGHEVVPSASLVPDGDGTLLFTNAGMNQFKDV 65
Query: 61 FLGLTPAPYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRM 120
FLG PY R ++QKC+RV GKHNDL G D+YHHTFFEMLGNWSF DY+K +A R
Sbjct: 66 FLGTGQRPYSRAVDTQKCLRVSGKHNDLEEVGHDTYHHTFFEMLGNWSFGDYFKAEAIRW 125
Query: 121 ALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNF 179
A E L + L DRLY T G D +GL D E D+WL E +P + + E K NF
Sbjct: 126 AWELLVE-RWGLAPDRLYATVHEGDDDFGLSADAEAYDLWLSETPLPEERVLYEPSKENF 184
Query: 180 WEMGSTGPCGYSSEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSAD 233
W MG TGPCG SE+H D++ P A VN D ++E+WN+VFI + +
Sbjct: 185 WMMGDTGPCGPCSELHVDLR--PPEARQETPGRELVNVDHPQVMELWNLVFIQYNAQTDG 242
Query: 234 TIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNR 293
++ PL ++DTG+GFER+V +LQ K STYDTDLF PLL+ + S + R + +
Sbjct: 243 SLEPLDDQHVDTGMGFERMVAVLQGKESTYDTDLFAPLLQAMADRSPREEI-RGYDDLHI 301
Query: 294 TDLDT------SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVK 344
D D + R+++D+ R I A++D + P + +R ++R A+ +++
Sbjct: 302 EDDDEHEQVRIALRVVADHIRAIAFAISDGVMPSNEGRGYVIRRILRRAVRYGYQTLELE 361
Query: 345 QGKLVKELSYNIAEILG--DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKT 402
+ L + + I ++ G D E Q+ I Q I EE + L ++ ++ +V
Sbjct: 362 EPFLHRLVDPLIEKMGGPFDGLAEQQEFIE--QAIRSEEESFLETL-GTGIEFFERVV-- 416
Query: 403 QPELEQFNIM--EEPGLVLGVKYLTKQ---------------------LARDPSITEISG 439
P + F EE +LG Q AR + G
Sbjct: 417 -PHVTGFQDTDGEESDRLLGALREDAQAMDLLEKAYVDTDDENDILHSFARTARGGTLPG 475
Query: 440 DMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDL 499
+AF L+DTYG ++ + +A + L + E +E ++ +ER A+AAS+ +D D+
Sbjct: 476 QIAFLLHDTYGFPIDLTRLMARERDLDVDMEGYETLMDRQQER--ARAASDFA-VDQSDV 532
Query: 500 KHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDS 559
+ + + + +G + +R R + D+
Sbjct: 533 Q----------------------AWQSVSPGEASVFVGYDRAVVPDAEVRAVRVVETGDT 570
Query: 560 IQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFG 619
Q E + +T YA AGGQ+ D G + + V++ + +I H
Sbjct: 571 QQYE------VELSRTPFYAEAGGQVGDTGTLRFGDES-----VQVLDTQREGERIAHTV 619
Query: 620 NVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDEC 678
+ + P VDA R HT +HL++A LR L QK V D
Sbjct: 620 DTLPEPLDGP---VEAAVDAERRNHIRAHHTATHLMHAVLRETLGDHVQQKGSLVAPDRL 676
Query: 679 ALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHL----TVIPGEI 734
DFS + + + D++ +E+ +N I + A ++P L T + E
Sbjct: 677 RFDFSHF-DAVDEDTLRHIERRVNTAIQQNIP----KQEARDVPIDEALDRGATALFDEQ 731
Query: 735 YPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSK 794
Y D V +I S E C GTHV TG I + S GVR ++ + G K
Sbjct: 732 YGDRVRVITFDPD---FSMELCGGTHVDATGEIGLFRFLSEGSVASGVRRVEAVAG---K 785
Query: 795 AAVEN 799
AA+E+
Sbjct: 786 AALEH 790
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P GD ++ F N+GM QFK+VFLG PY R ++QKC+RV GKHNDL G D+YHHT
Sbjct: 45 VPDGDGTLLFTNAGMNQFKDVFLGTGQRPYSRAVDTQKCLRVSGKHNDLEEVGHDTYHHT 104
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGNWSF DY+K +A R A E L + L DRLY T
Sbjct: 105 FFEMLGNWSFGDYFKAEAIRWAWELLVE-RWGLAPDRLYAT 144
>gi|339055871|ref|ZP_08648479.1| Alanyl-tRNA synthetase [gamma proteobacterium IMCC2047]
gi|330720929|gb|EGG99105.1| Alanyl-tRNA synthetase [gamma proteobacterium IMCC2047]
Length = 865
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 258/798 (32%), Positives = 384/798 (48%), Gaps = 121/798 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR++FLD+ QGH + SS +VP D ++ F N+GM QFK +FLG Y R
Sbjct: 1 MKSSDIRNAFLDFLVQ-QGHERLASSSLVPGNDPTLLFTNAGMVQFKELFLGNETRSYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K +A + A FLT+ +
Sbjct: 60 ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKVEAIKFAWTFLTE-VMG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L+ T + D+E DIWL ++GV + + G K NFW MG TGPCG
Sbjct: 119 LPEEKLWVTVY--------EEDDEAADIWLKDMGVSAERFSRLGKKDNFWSMGDTGPCGP 170
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
+EI YD G P S + D + IEIWN+VF+ +R + T+ PL K +DT
Sbjct: 171 CTEIFYDHGEEVAGGPPGSP----DEDGDRYIEIWNLVFMQFERAADGTMTPLPKPSVDT 226
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ++Q + Y+ DLF LL+ +V G TSN TS R+++D
Sbjct: 227 GMGLERIAAVMQGVHNNYEIDLFQTLLKRAAEVVGVSD------TSN-----TSLRVIAD 275
Query: 306 YSRMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+ R + ++D + P D + + + +K K +S + E +G+
Sbjct: 276 HIRSCSFLVSDGVIPSNDGRGYVLRRIIRRAIRHGHKLGMKDAFFHKIVSALVDE-MGEA 334
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
YPE+ +I+ +L +E EQF + G+ + +
Sbjct: 335 YPELVTRQAQIEQVLAKEE------------------------EQFAKTLDQGMQIFERD 370
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L++ EI G+ F LYDTYG ++ ++A + L + FEQ + E +ER
Sbjct: 371 LSELKG-----NEIPGETIFRLYDTYGFPVDLTADIARERNLIMDIAGFEQAMQEQRER- 424
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
A+AAS+ D+D+ F D YD T C + LV
Sbjct: 425 -ARAASSF-DVDMRADVVFEGETDFCGYDL--------LTEQCQISALV----------- 463
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-------VAYLTNT 596
+ G + +S+ +E + V ++ D T YA +GGQ+ D+G V +TNT
Sbjct: 464 --------KEGDTAESL-IEGDTGV-VVLDHTPFYAESGGQVGDVGTLQTDEAVFRVTNT 513
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
++ G L +V G SF V L + EVD R R H+ SHLL+
Sbjct: 514 VKQAG-------THLHQGVVERG----SFTVGTKLVA--EVDTRKRQATALNHSASHLLH 560
Query: 657 AALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
AALR VL QK V + DFS + E ++ ++A+E +ND I +V
Sbjct: 561 AALRDVLGEHVAQKGSLVSPERLRFDFSHF-EAVTAQQLSAIEAMVNDKIQANSEVGTEL 619
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGY 775
M A E + +T + GE Y D+V ++ ++D S E C GTHV TG I +I
Sbjct: 620 M-ALEDAMNSGVTALFGEKYSDEVRVLSMADG---FSVELCGGTHVNRTGDIAVFKIISE 675
Query: 776 KSYNHGVRSIKCLTGDSS 793
GVR I+ +TG+++
Sbjct: 676 SGVAAGVRRIEAVTGNAA 693
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK +FLG Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLLFTNAGMVQFKELFLGNETRSYTRATTSQRCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K +A + A FLT+ + LP ++L+ T
Sbjct: 88 FFEMLGNFSFGDYFKVEAIKFAWTFLTE-VMGLPEEKLWVT 127
>gi|225849840|ref|YP_002730074.1| alanyl-tRNA synthetase [Persephonella marina EX-H1]
gi|225645058|gb|ACO03244.1| alanyl-tRNA synthetase [Persephonella marina EX-H1]
Length = 878
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 261/801 (32%), Positives = 384/801 (47%), Gaps = 103/801 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR SFL YF +GHT VKS+ I+P D ++ FVN+GM FKNVFLGL PY R
Sbjct: 4 LTANQIRESFLRYF-EERGHTRVKSASIIPETDPTLLFVNAGMVPFKNVFLGLEEKPYKR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ QK RV GKHNDL G HHTFFEMLGN+SF DY+KR+A + A E+LT+ +
Sbjct: 63 AVSCQKVFRVSGKHNDLDNVGYTPRHHTFFEMLGNFSFGDYFKREAIQFAWEYLTE-VLE 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLE-LGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+P ++L + F D+E +IW + +G+P + I + G++ NFW MG TGPCG
Sbjct: 122 IPEEKLLVSVF--------EEDDEAFEIWNKVIGLPEEKIHRLGVEDNFWSMGETGPCGP 173
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SEI+YD +GE + + +E+WN+VF+ + R + PL K IDTG+G E
Sbjct: 174 CSEIYYD-RGEAFGNPELGSPEDIRYLEVWNLVFMQYNRDKDGRLTPLPKPNIDTGMGLE 232
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ ++LQ S Y+TDLF+PL+E + VSG K Y S T + R+++D+ R I
Sbjct: 233 RIASVLQGVNSNYETDLFMPLIEFAQSVSG-KSYDPEDPGSENT---VAMRVIADHLRAI 288
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVKQG---KLVKELSYNIAEILGDVYPEI 367
T ++D +FP R V +L + ++ G + E + +I+ + YPE+
Sbjct: 289 TFLISDGVFPSNEG--RGYVLRRILRRALRYGMELGIERPFLFEGVDVVVDIMKEPYPEL 346
Query: 368 QDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ + I+ L+ EE + LRK L + Y
Sbjct: 347 IGNRSFIKNLVKSEEEKFIKTLRKG---------------------------LEILYDII 379
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
Q A+ I+G AF LYDTYG ++++++A + + + L E KER++A
Sbjct: 380 QKAKKEGRNHITGKEAFLLYDTYGFPVDLLEDIARDNGFGVDIAEYYKLLEEQKERARAS 439
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
S +I PV + + +K L N + +G + +D
Sbjct: 440 WKSQAKEIK-------PV---------YLELKNK------LPEN---VFVGYERLEVDDA 474
Query: 547 AIRHA-RSGASIDSIQLEHNAWVG-LIFDKTNLYATAGGQIDDIGV----AYLTNTTQEN 600
I + +D++ H G ++ D T Y GGQ+ D G+ +L +
Sbjct: 475 QILSVLKEDREVDTL---HEGETGEIVLDVTPFYPEKGGQVGDRGIIEGDGFLFDVVDTQ 531
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
V EG IVH G V+ V G T +VD RL MR HT +HLL+AALR
Sbjct: 532 TPV--------EGIIVHRGKVIHG-TVKKGETVSAKVDKDTRLDIMRHHTATHLLHAALR 582
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
+L Q V D DF+ + E+L+ + + VE+ +N+ I V + M
Sbjct: 583 NLLGDHVKQAGSLVHPDYLRFDFTHF-ESLTDEDIKRVEELVNEEIMKNEPVICKEMPYD 641
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
E + I E Y D V +I IS E C GTHV TG I +I +
Sbjct: 642 E-AIKSGAIAIFDEKYGDTVRVISAG-----ISTELCGGTHVSRTGDIGYFKIISETAVA 695
Query: 780 HGVRSIKCLTGDSSKAAVENG 800
G R I+ + G + AVE G
Sbjct: 696 SGTRRIEAVAG---RKAVERG 713
Score = 113 bits (283), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ FVN+GM FKNVFLGL PY R + QK RV GKHNDL G HHT
Sbjct: 31 IPETDPTLLFVNAGMVPFKNVFLGLEEKPYKRAVSCQKVFRVSGKHNDLDNVGYTPRHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRL 915
FFEMLGN+SF DY+KR+A + A E+LT+ + +P ++L
Sbjct: 91 FFEMLGNFSFGDYFKREAIQFAWEYLTE-VLEIPEEKL 127
>gi|189501991|ref|YP_001957708.1| alanyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
gi|189497432|gb|ACE05979.1| hypothetical protein Aasi_0578 [Candidatus Amoebophilus asiaticus
5a2]
Length = 879
Score = 339 bits (869), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 250/794 (31%), Positives = 381/794 (47%), Gaps = 100/794 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
LCS +IR F+D+F + H VK++PIV D ++ F N+GM QFK+ FL APY R
Sbjct: 2 LCSSNIRQKFVDFF-KQKDHHHVKAAPIVNKEDPTLLFTNAGMNQFKDFFLNQQEAPYQR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
++Q C+RV GKHNDL G D+YHHT FEMLGNWSF +Y+K +A A E LT+
Sbjct: 61 AISTQPCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGEYFKEEAIACAWELLTE-VYK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP +RLY T F G ++ L D+E+ + W E + RD I K NFWEMG TGPCG
Sbjct: 120 LPQERLYVTVFQGDEEESLELDQESLNTW-EKYISRDRILYGNKKDNFWEMGDTGPCGPC 178
Query: 192 SEIHYDMKGEP----SSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ E + VN +IEIWN+VFI + R+++ ++ L ++DTG+
Sbjct: 179 SEIHVDIRTEEEIQQQAGKELVNTGHPQVIEIWNLVFIQYNRLASGQLMELPAKHVDTGM 238
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL +LQ K+STYDTD+F+PL+ I ++S K YG+ N+ D+ + R+++D+
Sbjct: 239 GFERLTMVLQGKSSTYDTDIFVPLIHNIMRLS-HKTYGK----DNKVDI--AMRVVADHI 291
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R IT A+AD P T +R ++R A+ + + +L +A+ +VY
Sbjct: 292 RAITFAIADGQLPSNTQAGYVVRRILRRAVRYGYTNLGF-ETPFMYQLVSILAQQFKNVY 350
Query: 365 PEIQDSINKI-QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
P+I+ + I Q+I EE F L L + + E NI +
Sbjct: 351 PQIKQQQSYIEQVIKSEEESFFKTLAVG-------LHRLEHISETLNINGQ--------- 394
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
I G AF LYDTYG ++ + +A K L + E F++ L + RS
Sbjct: 395 -----------QVIDGPTAFELYDTYGFPPDLTRLIAQEKGLEVDEEGFQKALQNQRIRS 443
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+ A D H V D +D+ +G DQ+ I
Sbjct: 444 QQAAVLEQGDW------HIVVKD--------------------VDSVFIGY---DQLELI 474
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
K I++ SI + ++ D+T Y GGQ+ D G + +
Sbjct: 475 AK-VIQYR-------SIYQKGEEIYQIVLDQTPFYPEGGGQVGDTGTLIVGEQI-----I 521
Query: 604 EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVE--VDARMRLGCMRAHTTSHLLNAALRR 661
+ + +I+H+ + ++ L + V+ VD + R H+ +HLL+AALR+
Sbjct: 522 AVFDTKKEYERIIHY-----THELPHDLHATVQAVVDVKKRNLIASNHSATHLLHAALRQ 576
Query: 662 VL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL + QK V DF Y + +S + + +E +N I + + E
Sbjct: 577 VLGSHIEQKGSLVNEKLLRFDFPHYTK-VSPEQIREIEHIVNQKIRANINLHEVRSMLLE 635
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+T + GE Y + V +I + S+E C GTH TG + +
Sbjct: 636 DAKSMGVTALFGEKYGEYVRVITF---DPYFSKELCGGTHASATGKLGFFKITAETGIAA 692
Query: 781 GVRSIKCLTGDSSK 794
G R I+ +T D+++
Sbjct: 693 GTRRIEAITADAAE 706
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ FL APY R ++Q C+RV GKHNDL G D+YHHT FEM
Sbjct: 33 DPTLLFTNAGMNQFKDFFLNQQEAPYQRAISTQPCLRVSGKHNDLEEVGVDTYHHTMFEM 92
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF +Y+K +A A E LT+ LP +RLY T
Sbjct: 93 LGNWSFGEYFKEEAIACAWELLTE-VYKLPQERLYVT 128
>gi|399912473|ref|ZP_10780787.1| alanyl-tRNA synthetase [Halomonas sp. KM-1]
Length = 870
Score = 339 bits (869), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 259/813 (31%), Positives = 386/813 (47%), Gaps = 145/813 (17%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR +FL+YF GHT+V SS +VP D ++ F N+GM FK+VFLG P PY R
Sbjct: 1 MKSADIRQAFLNYF-EEHGHTVVPSSSLVPGNDPTLLFTNAGMVPFKDVFLGRDPRPYVR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+KRDA R+A FLT+ +
Sbjct: 60 AASSQRCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDAIRLAWTFLTER-MG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L+ T F D+E IW E+GVP + I + G K NFW+MG TGPCG
Sbjct: 119 LPAEKLWVTVF--------TEDDEAYGIWADEIGVPHERIARIGAKDNFWQMGDTGPCGP 170
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI YD G P + D + IEIWN+VF+ R +A + PL K IDT
Sbjct: 171 CSEIFYDHGPEVWGGPPGTP----EEDGDRYIEIWNLVFMQFDRDAAGNLNPLPKPSIDT 226
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT-SYRMLS 304
G+G ER+ +LQ S Y+ DLF LL+ +G D DT S R+++
Sbjct: 227 GMGLERVAAVLQGVHSNYEIDLFQNLLKAAADATG------------HADTDTPSLRVIA 274
Query: 305 DYSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQG-----------KLVKELS 353
D+ R + D + P N R +L ++ G KLV L
Sbjct: 275 DHIRSCAFLITDGVLPS------NEGRGYVLRRIIRRAIRHGHKLGAKEPFFHKLVAALD 328
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
+GD YPE++++ ++++ IL +E EQF
Sbjct: 329 AE----MGDAYPELREASSQVERILLKEE------------------------EQFARTL 360
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
E G+ L L + LA + G+ F LYDTYG ++ ++ + ++L FE
Sbjct: 361 EHGMSL----LEEALAGLQGDV-LPGETVFKLYDTYGFPYDLTADVCRERGVSLDEAGFE 415
Query: 474 QKLNELKERSKAKA---ASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
++L +ER++A + AS ++L F Y+ R T
Sbjct: 416 RELEAQRERARAASQFGASQGVALELEGETAFT----------GYERLEDRAT------- 458
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
V I H G ++ +++ E V + D+T Y +GGQ+ D G
Sbjct: 459 ---------VTAIADH------EGNALVALEAEQRGIV--VLDRTPFYGESGGQVGDTG- 500
Query: 591 AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHT 650
YL T + G+ + + G +H G V+ +++ G +VDA++R +R H+
Sbjct: 501 -YL---TLDGGRFLVTDTQKQGGHHLHHG-VLLEGRLSVGAEVSPQVDAKLRGATIRNHS 555
Query: 651 TSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIND-VIAN- 707
+HL++ ALR VL QK V + DFS + E ++ +A VE+ +N+ V+AN
Sbjct: 556 ATHLMHKALRLVLGDHVQQKGSLVTPERLRFDFSHF-EAMTPAQLAEVERLVNEQVLANA 614
Query: 708 -----QVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVF 762
Q+ +D+ + + F Y D V ++ I + S E C GTHV
Sbjct: 615 PTRIEQMTLDQAKAKGAAALFEAK--------YADSVRVLTIGADD--FSIELCGGTHVA 664
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKA 795
+G I ++ + GVR I+ +TG+ + A
Sbjct: 665 RSGDIGCFHIVSEQGIASGVRRIEAITGEGALA 697
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM FK+VFLG P PY R A+SQ+C+R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLLFTNAGMVPFKDVFLGRDPRPYVRAASSQRCVRAGGKHNDLDNVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA R+A FLT+ + LP ++L+ T
Sbjct: 88 FFEMLGNFSFGDYFKRDAIRLAWTFLTE-RMGLPAEKLWVT 127
>gi|448236180|ref|YP_001569241.2| alanyl-tRNA ligase [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|205830248|sp|A9MFZ1.2|SYA_SALAR RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 876
Score = 339 bits (869), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 257/819 (31%), Positives = 388/819 (47%), Gaps = 149/819 (18%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYGIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S Y+ DLF L+E + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYEIDLFRTLIEAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLV 349
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 279 KSLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK----- 333
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
L + E++G E++ +++ +L + E EQF
Sbjct: 334 --LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQF 367
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 368 ARTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERDIKVDE 422
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFP 525
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 423 AGFETAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYD 462
Query: 526 CLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQI 585
L+ N G V +F +G ++++I A V + D+T YA +GGQ+
Sbjct: 463 HLELN--GKVTA--LFV----------NGKAVEAINAGQEAVV--VLDQTPFYAESGGQV 506
Query: 586 DD------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDA 639
D +G + N TQ+ G+ IG L L + G+VV + +VD
Sbjct: 507 GDKGELKGVGFTFAVNDTQKYGQA-IGHLGKLSAGALKVGDVVQA-----------DVDE 554
Query: 640 RMRLGCMRAHTTSHLLNAALRRVLTCTYQKSCRVFSDEC-ALDFSVYGETLSVDSVAAVE 698
R H+ +HL++AALR+VL + + SD+ DFS + E + + VE
Sbjct: 555 ARRARIRLNHSATHLMHAALRQVLGAHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIREVE 613
Query: 699 KYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCG 758
+N I + ++ H+ E + GE Y + V ++ + D S E C G
Sbjct: 614 DLVNAQIRRNLPIE-THIMELEAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGG 668
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TH TG I +I GVR I+ +TG+ + A V
Sbjct: 669 THARRTGDIGLFRIISESGTAAGVRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|163849369|ref|YP_001637413.1| alanyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
gi|205830020|sp|A9WCR2.1|SYA_CHLAA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|163670658|gb|ABY37024.1| alanyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
Length = 894
Score = 338 bits (868), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 254/810 (31%), Positives = 386/810 (47%), Gaps = 107/810 (13%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP 70
+L + IR +FL +F GHT V SS +V D ++ F NSGM QFK+VFLG PY
Sbjct: 3 KLTAAQIRETFLSFFIR-HGHTHVPSSSLVVADDPTLLFANSGMVQFKDVFLGREQRPYS 61
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R +QKC+RV GKHNDL G HHTFFEMLGN+SF DY+K +A +A + LT+
Sbjct: 62 RAVTAQKCLRVSGKHNDLEEVGPSPRHHTFFEMLGNFSFGDYFKAEAIALAWKLLTEE-F 120
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP++RL+FT F G D+ +P D+E +W+ G + + G K NFW MG TGPCG
Sbjct: 121 KLPVERLWFTVFAGDDE--VPPDDEAAALWIAQGADPSRVLRFGRKDNFWVMGDTGPCGP 178
Query: 191 SSEIHYDMKGEPSSALAR-VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
SEI + + S A VN+D + +EIWN VF+ + R T+ PL + +DTG+G
Sbjct: 179 CSEITMYIGDDLSQMRAEGVNSDDPNYVEIWNNVFMQYDRA---TMQPLPRPSVDTGMGL 235
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ER+ ++Q STY+TDLF+ ++ I K G+ ++R+ +YR ++D++R
Sbjct: 236 ERMAMVMQGVHSTYETDLFVAIINQIIKTRGSD---EEHYHAHRS----AYRAIADHARA 288
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
I +AD + P + LR ++R A + + + ++ ++ E +G+ YPE
Sbjct: 289 IAFLIADGVLPGNLGRSYVLRRILRRAAYQGRTIGFER--PFLADVITSVIEQMGEAYPE 346
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ + + +LIL AA +E + ++T + G++ V+ +
Sbjct: 347 L---VKRRELIL-----------SAADQEERQFLRTL----SGGLTRLQGVIEQVRARGE 388
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE-------L 479
Q+ I G+ AF L DTYG ++ Q++AA + LT+ +E + E
Sbjct: 389 QV--------IPGNDAFVLKDTYGFPLDLTQKIAAEQGLTVDEAGYEAAMAEQRARSRAA 440
Query: 480 KERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+ A D+DL HF Y+ S R T VIG
Sbjct: 441 AASKRGGEADLWADLDL-PASHFT----------GYERLSDRAT-----------VIG-- 476
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
D A+ A +G S+ ++ D T YA +GGQI D G+
Sbjct: 477 -MLGDGDALTSADTGRSVQ-----------IVLDTTPFYAESGGQIGDTGL-----LVGP 519
Query: 600 NGKVEIGELAS-LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
G V+I + L G IVH+G VV+ +++ G + VD R R HT +H+L A
Sbjct: 520 EGSVQIEDTRRPLPGLIVHYGRVVNG-RISVGDQVQATVDVVRRADIQRNHTATHMLQRA 578
Query: 659 LRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
LR VL Q V D DF+ + + + + + VE+ +N + V R +
Sbjct: 579 LRDVLGEHAAQAGSLVAPDRLRFDFT-HTKAVDPEELREVEQRLNKWVRADTTV-RWEIT 636
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVI--------SREPCCGTHVFNTGHIES 769
+ + GE Y D V L+ I + + S E C GTHV +TG I
Sbjct: 637 GYQDAMARGAIALFGEKYGDTVRLVTIERGQTLAEGEFASRDSLELCGGTHVNHTGEIGF 696
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSSKAAVEN 799
++ S G+R I+ LTG ++ VE
Sbjct: 697 VRIVSEGSIGSGIRRIEALTGRGAEGWVEQ 726
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK+VFLG PY R +QKC+RV GKHNDL G HHTFFEM
Sbjct: 35 DPTLLFANSGMVQFKDVFLGREQRPYSRAVTAQKCLRVSGKHNDLEEVGPSPRHHTFFEM 94
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGN+SF DY+K +A +A + LT+ LP++RL+FT
Sbjct: 95 LGNFSFGDYFKAEAIALAWKLLTE-EFKLPVERLWFT 130
>gi|190149963|ref|YP_001968488.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|307263291|ref|ZP_07544909.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
str. N273]
gi|205829969|sp|B3H177.1|SYA_ACTP7 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|189915094|gb|ACE61346.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|306871353|gb|EFN03079.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
str. N273]
Length = 874
Score = 338 bits (868), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 264/830 (31%), Positives = 396/830 (47%), Gaps = 146/830 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR SFLD+F +++GHT+V SS +VP D ++ F N+GM QFK+VFLGL PY R
Sbjct: 3 TTSEIRQSFLDFF-HSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEM+GN+SF DY+K DA + E+LT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEG-------MKCNFWEMG 183
LP ++LY T + D+E DIW ++ GVP DHI + G NFW MG
Sbjct: 122 LPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMG 173
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IE+WNIVF+ R++ T+ L
Sbjct: 174 DTGPCGPCTEIFYDHGETFWGGLPGSP----EEDGDRYIEVWNIVFMQFNRLADGTMEKL 229
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ ++Q+ S Y+TD+F L I++V+G N TDLD
Sbjct: 230 PKPSVDTGMGLERMTAVMQHVNSNYETDIFQTL---IKEVAG---------LLNVTDLDN 277
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLV 349
S R+++D+ R + +AD + P + LR ++R A LL +++ F K +
Sbjct: 278 KSLRVVADHIRACSYLIADGVVPSNEGRGYVLRRIIRRAVRHGNLLGAKEAFFYKLVPTL 337
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
+ + E+L IQ ++ + E EQF
Sbjct: 338 ATVMGHAGEVLTQKQAHIQKTL-------------------------------KAEEEQF 366
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L LTK +SG++AF LYDTYG ++ ++ +++T+
Sbjct: 367 ARTLERGLALLEDALTK-----VENNTLSGEVAFKLYDTYGFPLDLTADVCREREITIDE 421
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
FE ++ +ER AKA+SN D + + + + YD + + T L +
Sbjct: 422 AGFEAEMTAQRER--AKASSNFG----ADYNNVIKVEGQTDF-IGYDNLAAQATIVGLFS 474
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
N G ++D+IQ +A + I D+T YA GGQ+ D G
Sbjct: 475 N-----------------------GKAVDTIQSGESAVI--ILDQTPFYAEMGGQVGDSG 509
Query: 590 VA------YLTNTTQENGKV--EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
+ + N TQ+ G+V IG+L S G++ KVT VDA
Sbjct: 510 LISTEICNFAVNDTQKYGQVFGHIGQLTS--------GSLSIGDKVTA------TVDATR 555
Query: 642 RLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R+ H+ +HLL++ALR VL QK V + DFS E +S + +E+
Sbjct: 556 RVAITANHSATHLLHSALREVLGDHVAQKGSLVSENILRFDFS-QPEAISKSQLEEIERI 614
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I +QV M + + GE Y D V ++ +++ S E C GTH
Sbjct: 615 VNRKIRENIQVTIETMDIESAKKKGAMALF-GEKYGDVVRVVGMTE----FSIELCGGTH 669
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN-GKHLSTAASF 809
V TG I ++ + G+R ++ +T +++ + N K L +A F
Sbjct: 670 VQRTGDIGLFKLVSEGAVAAGIRRVEAVTAETAIEWLHNQQKVLQQSAEF 719
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL PY R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+K DA + E+LT P + LP ++LY T
Sbjct: 89 FFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEKLYVT 130
>gi|222527366|ref|YP_002571837.1| alanyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
gi|222451245|gb|ACM55511.1| alanyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
Length = 894
Score = 338 bits (868), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 254/810 (31%), Positives = 386/810 (47%), Gaps = 107/810 (13%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP 70
+L + IR +FL +F GHT V SS +V D ++ F NSGM QFK+VFLG PY
Sbjct: 3 KLTAAQIRETFLSFFIR-HGHTHVPSSSLVVADDPTLLFANSGMVQFKDVFLGREQRPYS 61
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R +QKC+RV GKHNDL G HHTFFEMLGN+SF DY+K +A +A + LT+
Sbjct: 62 RAVTAQKCLRVSGKHNDLEEVGPSPRHHTFFEMLGNFSFGDYFKAEAIALAWKLLTEE-F 120
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP++RL+FT F G D+ +P D+E +W+ G + + G K NFW MG TGPCG
Sbjct: 121 KLPVERLWFTVFAGDDE--VPPDDEAAALWIAQGADPSRVLRFGRKDNFWVMGDTGPCGP 178
Query: 191 SSEIHYDMKGEPSSALAR-VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
SEI + + S A VN+D + +EIWN VF+ + R T+ PL + +DTG+G
Sbjct: 179 CSEITMYIGDDLSQMRAEGVNSDDPNYVEIWNNVFMQYDRA---TMQPLPRPSVDTGMGL 235
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ER+ ++Q STY+TDLF+ ++ I K G+ ++R+ +YR ++D++R
Sbjct: 236 ERMAMVMQGVHSTYETDLFVAIINQIIKTRGSD---EEHYHAHRS----AYRAIADHARA 288
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
I +AD + P + LR ++R A + + + ++ ++ E +G+ YPE
Sbjct: 289 IAFLIADGVLPGNLGRSYVLRRILRRAAYQGRTIGFER--PFLADVITSVIEQMGEAYPE 346
Query: 367 IQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ + + +LIL AA +E + ++T + G++ V+ +
Sbjct: 347 L---VKRRELIL-----------SAADQEERQFLRTL----SGGLTRLQGVIEQVRARGE 388
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE-------L 479
Q+ I G+ AF L DTYG ++ Q++AA + LT+ +E + E
Sbjct: 389 QV--------IPGNDAFVLKDTYGFPLDLTQKIAAEQGLTVDEAGYEAAMAEQRARSRAA 440
Query: 480 KERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+ A D+DL HF Y+ S R T VIG
Sbjct: 441 AASKRGGEADLWADLDL-PASHFT----------GYERLSDRAT-----------VIG-- 476
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
D A+ A +G S+ ++ D T YA +GGQI D G+
Sbjct: 477 -MLGDGDALTSADTGRSVQ-----------IVLDTTPFYAESGGQIGDTGL-----LVGP 519
Query: 600 NGKVEIGELAS-LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
G V+I + L G IVH+G VV+ +++ G + VD R R HT +H+L A
Sbjct: 520 EGSVQIEDTRRPLPGLIVHYGRVVNG-RISVGDQVQATVDVVRRADIQRNHTATHMLQRA 578
Query: 659 LRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
LR VL Q V D DF+ + + + + + VE+ +N + V R +
Sbjct: 579 LRDVLGEHAAQAGSLVAPDRLRFDFT-HTKAVDPEELREVEQRLNKWVRADTTV-RWEIT 636
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVI--------SREPCCGTHVFNTGHIES 769
+ + GE Y D V L+ I + + S E C GTHV +TG I
Sbjct: 637 GYQDAMARGAIALFGEKYGDTVRLVTIERGQTLAEGEFASRDSLELCGGTHVNHTGEIGF 696
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSSKAAVEN 799
++ S G+R I+ LTG ++ VE
Sbjct: 697 VRIVSEGSIGSGIRRIEALTGRGAEGWVEQ 726
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK+VFLG PY R +QKC+RV GKHNDL G HHTFFEM
Sbjct: 35 DPTLLFANSGMVQFKDVFLGREQRPYSRAVTAQKCLRVSGKHNDLEEVGPSPRHHTFFEM 94
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGN+SF DY+K +A +A + LT+ LP++RL+FT
Sbjct: 95 LGNFSFGDYFKAEAIALAWKLLTE-EFKLPVERLWFT 130
>gi|51893138|ref|YP_075829.1| alanyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
gi|59798515|sp|Q67MV8.1|SYA_SYMTH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|51856827|dbj|BAD40985.1| alanyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
Length = 872
Score = 338 bits (868), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 254/794 (31%), Positives = 385/794 (48%), Gaps = 101/794 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR F+D+F ++GH V SS +VP+ D ++ F N+GM QFK+ FLGL Y R
Sbjct: 1 MTSAEIRQKFIDFF-KSKGHVHVPSSSLVPHNDPTLLFTNAGMNQFKDTFLGLEKREYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
+QKCVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA A EF+T P +
Sbjct: 60 AVTAQKCVRAGGKHNDLDEVGFTARHHTFFEMLGNFSFGDYFKEDALAYAWEFITSPEWL 119
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
LP DRL+ + + DE+ D+W ++GVP D I + G K NFW MG TGPCG
Sbjct: 120 GLPKDRLWVSIY--------KDDEQAFDVWHNKVGVPADRIVRLGEKDNFWRMGDTGPCG 171
Query: 190 YSSEIHYDMKGEPSSALARVNADRNDLI------EIWNIVFISHKRVSADTIVPLSKNYI 243
SEI +DM P A + R D E WN VF+ + + + + +VPL + +
Sbjct: 172 PCSEIFWDMG--PEYACDHPDGCRIDTCGCDRWREFWNNVFMQYNQ-TPEGLVPLERTGV 228
Query: 244 DTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRML 303
DTGLG ER+ TI+Q S +D DL+ P+ I ++SG K G ++R++
Sbjct: 229 DTGLGLERMATIMQGVWSNWDIDLWQPIFARIHELSGKKYEGEGPEA-------VAFRVI 281
Query: 304 SDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL 360
+D++R T +AD + + +R ++R A+ V + + +++ +A+++
Sbjct: 282 ADHARCCTFLIADGVRFSNEGRGYVMRRILRRAVRFGR-VLGFAE-PFIWKVAGAVADVM 339
Query: 361 GDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
GD YPE+++ + IQ D LR +E + ++T LEQ G
Sbjct: 340 GDAYPEVRERLPVIQ----------DELR----REEERFLRT---LEQ-----------G 371
Query: 421 VKYLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
+ L + LA R T ISG AF LYDTYG +I++++A + T+ + ++ +
Sbjct: 372 MNRLEEILARMRQKGETVISGQDAFVLYDTYGFPLDIVRDVAREQGFTVDEQGYQAAMA- 430
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
+ A D+ +T+ + + H + + + G V+
Sbjct: 431 ----EQRARARAARDVSY-------ITEVQSRIAGHLEGVAPTRFVGYTELAGEGRVLA- 478
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
VF + +A A G+S+ ++ D+T YA GGQ+ D G
Sbjct: 479 -VFDQEGNAT-GAGEGSSVI-----------IVLDRTPFYAEGGGQVGDTG-----QIVA 520
Query: 599 ENGKVEIGELASL-EGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
+VE+ + L G +H+G V F + G VDAR R + HT +HLL+
Sbjct: 521 PGLRVEVEDCRKLPSGHHLHYGTVQEGF-LEVGQQVEARVDARKRKDTQKNHTATHLLHK 579
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
ALR VL T Q V D DF+ G ++ + +AAVE+ IN I V M
Sbjct: 580 ALREVLGTHVQQAGSLVAPDRLRFDFTHTG-PMTPEQIAAVEEMINAEIEAAEPVTWTEM 638
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
E L + + GE Y + V ++ + D SRE C G HV NT ++ ++
Sbjct: 639 PLDEARALGAMALF-GEKYGEIVRVVSVGDG---WSRELCGGCHVSNTSEVQYFKILSES 694
Query: 777 SYNHGVRSIKCLTG 790
GVR I+ +TG
Sbjct: 695 GIGGGVRRIEAVTG 708
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 69/103 (66%), Gaps = 1/103 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+ FLGL Y R +QKC+R GGKHNDL G + HHT
Sbjct: 28 VPHNDPTLLFTNAGMNQFKDTFLGLEKREYTRAVTAQKCVRAGGKHNDLDEVGFTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFTF 919
FFEMLGN+SF DY+K DA A EF+T P + LP DRL+ +
Sbjct: 88 FFEMLGNFSFGDYFKEDALAYAWEFITSPEWLGLPKDRLWVSI 130
>gi|409124113|ref|ZP_11223508.1| alanyl-tRNA ligase [Gillisia sp. CBA3202]
Length = 871
Score = 338 bits (868), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 243/792 (30%), Positives = 384/792 (48%), Gaps = 96/792 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IRS +L++F ++ H +V S+P+V D ++ F N+GM QFK FLG T + R
Sbjct: 1 MNSQEIRSKYLEFF-KSKSHEIVASAPMVIKDDPTLMFTNAGMNQFKEYFLGNTVPKHNR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
V ++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K +A A E LT+
Sbjct: 60 VTDTQKCLRVSGKHNDLEEVGMDTYHHTMFEMLGNWSFGDYFKSEAIHWAWELLTEV-FK 118
Query: 132 LPLDRLYFTYFGGS-DQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+ D LY + F GS D L D+E D+W E+ VP + I K NFWEMG GPCG
Sbjct: 119 VNKDILYVSVFEGSTDGDNLGLDQEALDLWKEI-VPEERIIYGNKKDNFWEMGDQGPCGP 177
Query: 191 SSEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SE+H D++ E A VNAD ++EIWN+VF+ R + ++ L ++DTG
Sbjct: 178 CSEMHVDLRSEEEKAAVPGRDLVNADHPLVVEIWNLVFMEFNRKADGSLEKLPAQHVDTG 237
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERL +LQ+K S YDTD+F PL+E IEKV+ K YG S +TD+ + R+++D+
Sbjct: 238 MGFERLCMVLQDKKSNYDTDVFTPLIERIEKVTTCK-YG----NSEKTDI--AIRVIADH 290
Query: 307 SRMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R ++ ++AD P T + + + F + + +L +++ +G+ +
Sbjct: 291 IRAVSFSIADGQLPSNTGAGYVIRRILRRAIRYGFTFLNTKEPFIHKLVATLSDQMGEAF 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE++ + I+ ++ EE + F LR L+Q GL+L
Sbjct: 351 PELKSQKSLIENVIREEEQSF--LRT---------------LDQ-------GLIL----- 381
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+++ + +SG AF L+DT+G ++ + + L F +L + K+RS+
Sbjct: 382 LEKIIEETDGKMVSGKKAFELFDTFGFPIDLTALILRERGYNLDENEFNAELKQQKDRSR 441
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
A + D + K P VG + + I
Sbjct: 442 AASVVTAGD---------------------WIVRGKEDANP-----FVGYDVIESPVEIT 475
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
++ ++ + I + +KT Y GGQ+ D GV + K+E
Sbjct: 476 RYRKVESKKDGQLFQI----------VLNKTPFYPEGGGQVGDKGVLLSLDAE----KIE 521
Query: 605 IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL- 663
+ + I+HF + ++ L ++V+V R R H+ +HLL+ ALR VL
Sbjct: 522 VVDTKKENNLIIHFTKTLPK-DLSGLLMAKVDVTKRRRTEA--NHSATHLLHQALRHVLG 578
Query: 664 TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPF 723
T QK V + DFS + + L+ + + VE ++N I Q+ ++ + +
Sbjct: 579 THVAQKGSMVNHEYLRFDFSHFSK-LTSEELMKVEHFVNARIQEQIILNEQRNLTYDEAI 637
Query: 724 LTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVR 783
+ GE Y D V + S E C GTHV NTG I ++ + G+R
Sbjct: 638 DQGAIALFGEKYGDSVRAVKFGS-----SMELCGGTHVKNTGEIWYFKIVSEGAVAAGIR 692
Query: 784 SIKCLTGDSSKA 795
I+ +TGD+ K+
Sbjct: 693 RIEAITGDAVKS 704
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 59/84 (70%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK FLG T + RV ++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKEYFLGNTVPKHNRVTDTQKCLRVSGKHNDLEEVGMDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTK 905
LGNWSF DY+K +A A E LT+
Sbjct: 92 LGNWSFGDYFKSEAIHWAWELLTE 115
>gi|359404959|ref|ZP_09197761.1| alanine--tRNA ligase [Prevotella stercorea DSM 18206]
gi|357559824|gb|EHJ41256.1| alanine--tRNA ligase [Prevotella stercorea DSM 18206]
Length = 873
Score = 338 bits (868), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 254/790 (32%), Positives = 379/790 (47%), Gaps = 103/790 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR SF +F +GHT+V S+P+V D ++ F N+GM Q+K++ LG T P PR
Sbjct: 2 MTANEIRDSFKKFF-ELKGHTIVPSAPMVIKDDPTLMFTNAGMNQWKDIILG-TREPEPR 59
Query: 72 V-ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K A A E+L
Sbjct: 60 RRADTQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEGAIDYAWEYLVDVLK 119
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
P D LY T F GS++ GL D+E W + VP DHI NFWEMG TGPCG
Sbjct: 120 LNPAD-LYVTVFEGSEEEGLTRDDEAASYWAK-HVPADHIINGNKHDNFWEMGDTGPCGP 177
Query: 191 SSEIHYDMKG--EPSSALAR--VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH D + E + R VN D +IEIWNIVF+ ++R + ++VPL + IDTG
Sbjct: 178 CSEIHLDSRTPEEKAKVPGRELVNKDDPQVIEIWNIVFMQYERKANGSLVPLPMHVIDTG 237
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV +Q K S YDTD+F P+++ E ++G K YG + + D + R+ +D+
Sbjct: 238 MGFERLVRAMQGKHSNYDTDIFQPIIKEEEAITGMK-YG------EKEETDVAMRVCADH 290
Query: 307 SRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R + ++AD P A +R ++R A+ + K+G L K + E +G+
Sbjct: 291 LRAVAFSIADGQLPSNAKAGYVIRRILRRAVRYAYTFLGQKEGFLYKLIPVLTRE-MGEA 349
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN-IMEEPGLVLGVK 422
+PE++ + I ++ EE F L + + N M+E
Sbjct: 350 FPELKAQHDLILHVIKEEEDSF-------------LRTLEKGINMLNSAMDE-------- 388
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L KQ TE+ G AF L+DTYG ++ + + T+ + F+ ++ + KER
Sbjct: 389 -LKKQ-----GKTELDGVQAFRLFDTYGFPLDLTELICRENGFTVAADEFDAEMQKQKER 442
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKY-KYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVF 541
++ AA V + D + L+ + ++ YD+ + C
Sbjct: 443 ARNAAA--VENSDWVILRE---GEQQFVGYDF--------TEYEC--------------- 474
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
H +R+ + + + N + L+ D T Y GGQ+ D GV E+
Sbjct: 475 ----HILRYRK-------VTQKKNTYFELVLDNTPFYGEMGGQVGDTGV-----LVSEDE 518
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
V I + G+ VH +V + P VD R G HT +HLL+ AL++
Sbjct: 519 TVTITDTKRENGQSVH---IVKALPKNPEADFMACVDVDAREGSAANHTATHLLDYALKQ 575
Query: 662 VL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL QK V DFS + + ++ + + VE+ +ND+I + +D E
Sbjct: 576 VLGDHVEQKGSFVSPTTLRFDFSHFTK-VTDEELRKVERLVNDLIRQDLPLDEHRDTPFE 634
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+ GE Y D V ++ S E C G H +TG I +I S
Sbjct: 635 EAKKLGAIALFGEKYGDKVRVVRFGP-----SCEFCGGIHAQSTGRIGMFKIISESSVAA 689
Query: 781 GVRSIKCLTG 790
G+R I+ TG
Sbjct: 690 GIRRIEAKTG 699
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRV-ANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
D ++ F N+GM Q+K++ LG T P PR A++QKC+RV GKHNDL G D+YHHT FE
Sbjct: 33 DPTLMFTNAGMNQWKDIILG-TREPEPRRRADTQKCLRVSGKHNDLEEVGHDTYHHTMFE 91
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K A A E+L P D LY T
Sbjct: 92 MLGNWSFGDYFKEGAIDYAWEYLVDVLKLNPAD-LYVT 128
>gi|91784488|ref|YP_559694.1| alanyl-tRNA synthetase [Burkholderia xenovorans LB400]
gi|122970272|sp|Q13W97.1|SYA_BURXL RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|91688442|gb|ABE31642.1| alanyl-tRNA synthetase [Burkholderia xenovorans LB400]
Length = 874
Score = 338 bits (868), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 253/809 (31%), Positives = 389/809 (48%), Gaps = 134/809 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG PY R
Sbjct: 1 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAESRPYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HHTFFEMLGN+SF DY+KRDA A E LT
Sbjct: 60 ATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLT-GVYQ 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP D+L+ T + D+E DIW E+GVP + I + G NFW+M
Sbjct: 119 LPKDKLWVTVY--------HEDDEAHDIWAKEVGVPVERIIRIGDNKGARYASDNFWQMA 170
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG SEI YD G P S D + IEIWN+VF+ R + + PL
Sbjct: 171 DTGPCGPCSEIFYDHGPDVWGGPPGSP----EEDGDRYIEIWNLVFMQFNRDAQGNMTPL 226
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S Y+ DLF L++ + A+ G + T+N
Sbjct: 227 PKQCVDTGMGLERIAAVLQHVHSNYEIDLFQALIK-----AAARETGVSDLTNN------ 275
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELSY 354
S ++++D+ R + + D + P + LR +VR A+ +K+ K+G +
Sbjct: 276 SLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAI---RHGYKLGKKGSFFHRMVA 332
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
++ +G YPE++++ E R+ D LR Q E F +E
Sbjct: 333 DLVAQMGAAYPELKEA----------EQRVTDVLR-------------QEEERFFETIEH 369
Query: 415 PGLVLGVKYLTKQLAR--DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF 472
G+ L LA S + G++AF L+DTYG ++ ++ +++T+ AF
Sbjct: 370 -----GMSILEGALAELEAGSSKTLDGELAFKLHDTYGFPLDLTADVCREREVTVDEAAF 424
Query: 473 EQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
++ + ++R +A+AA K+K + + ++ TF
Sbjct: 425 DEAMT--RQREQARAAG------------------KFKMAQGLEYSGEKTTFHGY----- 459
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV-- 590
D+V D I GAS+ A V + D T YA +GGQ+ D GV
Sbjct: 460 -----DEVVFDDAKVIALYVEGASVQQASQGQQAVV--VLDHTPFYAESGGQVGDQGVLA 512
Query: 591 -AYLTNTTQENGKVE---IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCM 646
A + + KV+ +G +LE + G+VV + E+DA R
Sbjct: 513 NASVRFAVSDTLKVQADVVGHHGTLEQGTLKVGDVV-----------KAEIDAVRRARTA 561
Query: 647 RAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DV 704
R H+ +HL++ ALR VL T QK V +D+ DF+ + L+ + + VE+ +N +V
Sbjct: 562 RNHSATHLMHKALREVLGTHVQQKGSLVDADKTRFDFA-HNAPLTDEQIRRVEEIVNAEV 620
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNT 764
+AN + R + + + + GE Y D+V ++D+ SRE C GTHV T
Sbjct: 621 LANAPGIVR--VMSFDEAVKGGAMALFGEKYGDEVRVLDLG-----FSRELCGGTHVHRT 673
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
G I ++ G+R ++ +TGD++
Sbjct: 674 GDIGLFKIVMEGGVAAGIRRVEAITGDNA 702
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG PY R +Q+ +R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLLFTNSGMVQFKDVFLGAESRPYSRATTAQRSVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA A E LT LP D+L+ T
Sbjct: 88 FFEMLGNFSFGDYFKRDAIHYAWELLT-GVYQLPKDKLWVT 127
>gi|259418847|ref|ZP_05742764.1| alanyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
gi|259345069|gb|EEW56923.1| alanyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
Length = 903
Score = 338 bits (868), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 242/796 (30%), Positives = 377/796 (47%), Gaps = 109/796 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FL+YF QGH +V SSP+VP D ++ F NSGM QFKN F G+ Y R ++Q
Sbjct: 26 IRSTFLNYFAK-QGHEVVDSSPLVPRNDPTLMFTNSGMVQFKNCFTGVDRRDYVRATSAQ 84
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K +A A E +T +P D+
Sbjct: 85 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKNEAIPFAWELITG-EFDIPKDK 143
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHY 196
LY T + D+E +IW ++GVP D I + NFW+MG TGPCG +EI Y
Sbjct: 144 LYTTVY--------HTDDEAFEIWKKVGVPEDRIIRIATSDNFWQMGDTGPCGPCTEIFY 195
Query: 197 D-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
D G P S D + IEIWN+VF+ ++R + ++V L IDTG+G ER
Sbjct: 196 DHGDHIWGGPPGSP----EEDGDRFIEIWNLVFMQNERFADGSMVDLDMQSIDTGMGLER 251
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
+ +LQ Y+TDLF L+E V+ + P+G D + +R+++D+ R +
Sbjct: 252 IAALLQGTHDNYETDLFKYLIEASATVTNSDPFG---------DQNVHHRVIADHLRSCS 302
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
+A+ + P + LR ++R A+ + + ++ +L + +G YPE+
Sbjct: 303 FLIAEGVLPSNEGRGYVLRRIMRRAMRHASLLGATD--PVMHKLVPALVSQMGAAYPELG 360
Query: 369 DSINKIQLIL-GEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
I+ EE+R L + K L + +L Q +++
Sbjct: 361 QGQALIEETFEQEETRFLKTLDRG----LKLLDEASVDLNQGDVL--------------- 401
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
G+ AF LYDT+G ++ Q+ AK + + + F+ + KE+S+
Sbjct: 402 ----------PGETAFKLYDTFGFPLDLTQDALRAKGVEVDTDGFDAAMKAQKEQSR--- 448
Query: 488 ASNVPDIDLMDLK-HFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A + D D+K +F + D + ++ Y+T L D
Sbjct: 449 AGGIGLGDAADVKVYFDIVDAEGTTEFLGYETEKAEGQIVAL--------------VKDG 494
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
+ A+ G DS+Q +I ++T Y +GGQ+ D GV T E G I
Sbjct: 495 AKVETAKKG---DSVQ--------IILNQTPFYGESGGQVGDTGV-----LTVEGGAARI 538
Query: 606 GELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-T 664
+ +EG +H V +++ G + +EVD R H+ +HLL+ ALR L
Sbjct: 539 SDTKKVEGLFLHIAEVTEG-EISVGSGAAMEVDHTRRSQIRANHSATHLLHEALRNALGE 597
Query: 665 CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFL 724
QK ++ DFS + + +S + + + +ND I V R M + L
Sbjct: 598 HVAQKGSLNAAERLRFDFS-HNKAVSQEDLTKIASEVNDFIRQNSPVSTRIMTPDDARAL 656
Query: 725 THLTVIPGEIYPDDVILIDISDKE-------NVISREPCCGTHVFNTGHIESCTVIGYKS 777
+ GE Y ++V ++ + + + S E C GTHV TG I + ++G +
Sbjct: 657 GAQALF-GEKYGEEVRVVSMGRADTGKGADGDTYSIELCGGTHVKQTGDIGTFVILGDSA 715
Query: 778 YNHGVRSIKCLTGDSS 793
+ GVR I+ LTG ++
Sbjct: 716 SSAGVRRIEALTGAAA 731
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFKN F G+ Y R ++QKC+R GGKHNDL G + HHT
Sbjct: 48 VPRNDPTLMFTNSGMVQFKNCFTGVDRRDYVRATSAQKCVRAGGKHNDLDNVGYTARHHT 107
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K +A A E +T +P D+LY T
Sbjct: 108 FFEMLGNFSFGDYFKNEAIPFAWELITG-EFDIPKDKLYTT 147
>gi|445114490|ref|ZP_21377952.1| alanine-tRNA ligase [Prevotella nigrescens F0103]
gi|444840719|gb|ELX67745.1| alanine-tRNA ligase [Prevotella nigrescens F0103]
Length = 887
Score = 338 bits (868), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 262/808 (32%), Positives = 381/808 (47%), Gaps = 126/808 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR SF +F ++GH +V S+P+V D ++ F N+GM Q+K++ LG T P PR
Sbjct: 2 MTANEIRDSFKKFF-ESKGHVIVPSAPMVIKDDPTLMFTNAGMNQWKDIILG-TKDPEPR 59
Query: 72 V-ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K A A E+L
Sbjct: 60 RRTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEGAIDYAWEYLVDVLK 119
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
P D LY T F GS + G+P D+E W + +P DHI NFWEMG TGPCG
Sbjct: 120 LNPAD-LYVTVFEGSPEDGIPRDDEAAKYWAK-HLPADHIIDGNKHDNFWEMGETGPCGP 177
Query: 191 SSEIHYDMKGEPSSAL----ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH D + A VN D +IEIWNIVF+ +R S ++ PLS + IDTG
Sbjct: 178 CSEIHVDSRSNEEKAQIPGRELVNKDNPQVIEIWNIVFMQFQRKSDGSLSPLSMHVIDTG 237
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTT---------SNRTDLD 297
+GFERLV +LQ K S YDTD+F P ++ IE++SG K YG FTT + + +D
Sbjct: 238 MGFERLVRMLQGKNSNYDTDIFQPTIKEIERLSGKK-YG--FTTPSGKNGEAKTEQEKID 294
Query: 298 TSYRMLSDYSRMITVALADNMFP---DATAKLRNVVRDALLISEDVFKVKQGKLVKELSY 354
+ R+++D+ R + ++AD+ P A +R ++R A+ + K+ + K L+
Sbjct: 295 IAMRVIADHMRAVAFSIADSQLPGNAKAGYVIRRILRRAVRYAYTFLNQKEAFIYKLLNT 354
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
I E +G YPE+ I ++ EE F LR
Sbjct: 355 FIHE-MGGAYPELTAQRELIVRVIKEEEDSF--LRT------------------------ 387
Query: 415 PGLVLGVKYLTKQL--ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF 472
L G+ LT + + TE+SG AF L+DTYG ++ + + + F
Sbjct: 388 --LEKGINLLTNTMDEMKAQGKTELSGKEAFRLFDTYGFPLDLTELICREHGFGVDERQF 445
Query: 473 EQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKY-KYDYHYDTNSKRYTFPCLDTNL 531
E+++ + K R++ AA V + D + L+ + K+ YDY + C
Sbjct: 446 EEEMAQQKARARNAAA--VENSDWVVLRE---GEQKFVGYDY--------TEYEC----- 487
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
H +R+ + + + N + L+ D T Y GGQ+ D GV
Sbjct: 488 --------------HILRYRK-------VTQKKNTFYELVLDHTPFYGEMGGQVGDQGV- 525
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHF-----GNVVSSFKVTPGLTSRVEVDARMRLGCM 646
E+ ++I + + +H NV + F VD R
Sbjct: 526 ----LVSEDETIDIVDTKRENNQSIHIVKQLPKNVEADFMAC--------VDTDKRDASA 573
Query: 647 RAHTTSHLLNAALRRVLT--CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
HT +HLL+ AL++VL C QK V D DFS + + ++ + + VE+ +ND+
Sbjct: 574 ANHTATHLLDYALKQVLGEHCE-QKGSYVSPDTLRFDFSHF-QKVTDEELRQVERLVNDM 631
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIP--GEIYPDDVILIDISDKENVISREPCCGTHVF 762
I R + L + + GE Y D V +I S E C G H
Sbjct: 632 IRQDFPCG--EYRDTPLAEAKEMGAVALFGEKYGDKVRVIKFGP-----SCEFCGGIHAT 684
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTG 790
+TG I +I S GVR I+ LTG
Sbjct: 685 STGRIGFFKIISESSVAAGVRRIEALTG 712
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 63/98 (64%), Gaps = 3/98 (3%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRV-ANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
D ++ F N+GM Q+K++ LG T P PR +SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 33 DPTLMFTNAGMNQWKDIILG-TKDPEPRRRTDSQKCLRVSGKHNDLEEVGHDTYHHTMFE 91
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K A A E+L P D LY T
Sbjct: 92 MLGNWSFGDYFKEGAIDYAWEYLVDVLKLNPAD-LYVT 128
>gi|373501244|ref|ZP_09591608.1| alanyl-tRNA synthetase [Prevotella micans F0438]
gi|371950008|gb|EHO67869.1| alanyl-tRNA synthetase [Prevotella micans F0438]
Length = 881
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 248/801 (30%), Positives = 369/801 (46%), Gaps = 101/801 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR SF +F ++GH +V S+P+V D ++ F N+GM Q+K+V LG+ R
Sbjct: 1 MTANEIRESFKKFF-ESKGHVIVPSAPMVIKDDPTLMFTNAGMNQWKDVILGIKDPEPRR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K A A E+L
Sbjct: 60 RTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEGAIDYAWEYLVDVLQL 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D LY T F GS G+ DEE W + +P DHI NFWEMG TGPCG
Sbjct: 120 NPED-LYVTVFEGSPAEGIDRDEEAVRCWAK-HLPADHILDGNRHDNFWEMGDTGPCGPC 177
Query: 192 SEIHYDMK-------GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
SEIH D + G P L VN D +IEIWNIVF+ R + ++ PL+ N ID
Sbjct: 178 SEIHIDSRPPEEKNGGIPGREL--VNKDNPQVIEIWNIVFMQFNRKADGSLTPLAMNVID 235
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTD---LDTSYR 301
TG+GFERLV +LQ K S YDTD+F P++ IE++SG + YG T T RT+ +D + R
Sbjct: 236 TGMGFERLVRMLQGKHSNYDTDIFQPIIREIEQLSGMR-YGFTTPTDARTEQEKIDIAMR 294
Query: 302 MLSDYSRMITVALADNMFP---DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAE 358
+++D+ R + ++AD P A +R ++R A+ + K+ + K L+ I E
Sbjct: 295 VVADHLRAVAFSIADGQLPGNAKAGYVIRRILRRAVRYAYTFLGQKEAFIYKLLNVLIHE 354
Query: 359 ILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
+G YPE+ I ++ EE D+ + K L + +LE+
Sbjct: 355 -MGQAYPELTAQRELIGRVIKEEE---DSFLRTLDKGITLLNEAMHQLEE---------- 400
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
T++ G AF L+DTYG ++ + + T+ EAF +++ +
Sbjct: 401 -------------KHETQLDGQEAFRLFDTYGFPLDLTELICRENGYTVDIEAFNREMQQ 447
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIG 537
K+R++ A D ++ F YDY Y+ RY
Sbjct: 448 QKQRARNAAVVENEDWTIL----FEGEQQFVGYDYSEYECKIMRYR-------------- 489
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
+ + ++ L+ D T Y GGQ+ D GV
Sbjct: 490 ---------------------KVNQKKRSFYELVLDYTPFYGEMGGQVGDQGV-----LV 523
Query: 598 QENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
E+ +E+ + + +H +V P VD R HT +HLL+
Sbjct: 524 SEDETIEVIDTKRENNQSIH---IVKELPKNPTAHFMACVDTDKREASAANHTATHLLDY 580
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
AL++VL QK V D D + + + ++ D + VE+ +N +I + +D
Sbjct: 581 ALKQVLGEHAEQKGSYVSPDTLRFDVAHF-QKITDDELRQVERIVNRMIRQDIPLDEHRD 639
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ + GE Y D V ++ S E C G H +TG I +I
Sbjct: 640 TPIDEARKMGAIALFGEKYGDTVRVVRFGP-----SCEFCGGIHATSTGRIGFFKIISES 694
Query: 777 SYNHGVRSIKCLTGDSSKAAV 797
S G+R I+ +TG + A+
Sbjct: 695 SVAAGIRRIEAMTGQVCEDAI 715
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM Q+K+V LG+ R +SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQWKDVILGIKDPEPRRRTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K A A E+L P D LY T
Sbjct: 92 LGNWSFGDYFKEGAIDYAWEYLVDVLQLNPED-LYVT 127
>gi|387771345|ref|ZP_10127511.1| alanine--tRNA ligase [Pasteurella bettyae CCUG 2042]
gi|386902550|gb|EIJ67390.1| alanine--tRNA ligase [Pasteurella bettyae CCUG 2042]
Length = 875
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 252/813 (30%), Positives = 389/813 (47%), Gaps = 144/813 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR SFLD+F +++GH +V+SS +VP+ D ++ F N+GM QFK+VFLG+ Y R
Sbjct: 3 TTAQIRQSFLDFF-HSKGHQVVESSSLVPHNDPTLLFTNAGMNQFKDVFLGMDKRSYSRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEM+GN+SF DY+K DA A E+LT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIHFAWEYLTGPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP ++LY T + D+E +IW ++GVP +HI + G NFW MG
Sbjct: 122 LPKEKLYVTVY--------ETDDEAYNIWNQQVGVPAEHIIRIGDNKGAPYASDNFWAMG 173
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IE+WNIVF+ R+ T+ PL
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGLPGSP----EEDGDRYIEVWNIVFMQFNRLVDGTMEPL 229
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S Y+ D+F L++ ++ G K DLD
Sbjct: 230 PKPSVDTGMGLERMTAVLQHVNSNYEIDIFQTLIKKTAEIIGTK------------DLDN 277
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSY 354
S R+++D+ R +AD + P + LR ++R A V+ G L+ +
Sbjct: 278 KSLRVIADHIRSCAYLIADGVIPSNEGRGYVLRRIIRRA---------VRHGHLLGAQNS 328
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
+++ P + + I+ E+ + + KA E EQF E
Sbjct: 329 FFYKLV----PTLAQVMGHAGEIITEKQALIEKTLKA-------------EEEQFARTLE 371
Query: 415 PGLVLGVKYLTKQLARDPSITEI-----SGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
GL L D ++T++ SGD+AF LYDTYG ++ ++ + + +
Sbjct: 372 RGLSL----------LDDALTQVKNNMLSGDVAFKLYDTYGFPLDLTADVCRERNIAIDE 421
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
E F++++ + R++A + NV D + D K ++ K Y L
Sbjct: 422 EGFDREMQAQRARAQANSNFNV------DYNNLIKVDGKTEF--------KGYETTSLSE 467
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
V + D G S+DSIQ NA + I D+T Y +GGQI D G
Sbjct: 468 AKVVALFAD---------------GKSVDSIQSGENAVI--ILDRTPFYGESGGQIGDTG 510
Query: 590 ------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRL 643
++ N TQ+ G+V G + L+ + G +VS+ +VD R
Sbjct: 511 YISTDLASFRINDTQKYGQV-FGHIGQLQSGELSVGEIVSA-----------QVDTERRK 558
Query: 644 GCMRAHTTSHLLNAALRRVLTCTYQKSCRVFSDECALDFS-VYGETLSVDSVAAVEKYIN 702
H+ +HLL+AALR+VL + + SD AL F + E +S + +E+ +N
Sbjct: 559 AITANHSATHLLHAALRKVLGDHVAQKGSLVSD-SALRFDFIQPEPISKTQLTEIERLVN 617
Query: 703 DVIANQ--VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
I + V D + +++ L GE Y D V ++ ++D S E C GTH
Sbjct: 618 RQIRDNDLVTTDIMDIESAKQKGAMALF---GEKYGDIVRVVGMTD----FSIELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
V TG I ++ + G+R I+ +T +++
Sbjct: 671 VQRTGDIGLFKIVSEGAVAAGIRRIEAVTAENA 703
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLG+ Y R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPHNDPTLLFTNAGMNQFKDVFLGMDKRSYSRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+K DA A E+LT P + LP ++LY T
Sbjct: 89 FFEMMGNFSFGDYFKHDAIHFAWEYLTGPQWLGLPKEKLYVT 130
>gi|19074068|ref|NP_584674.1| ALANYL tRNA SYNTHETHASE [Encephalitozoon cuniculi GB-M1]
gi|19068710|emb|CAD25178.1| ALANYL tRNA SYNTHETHASE [Encephalitozoon cuniculi GB-M1]
Length = 864
Score = 338 bits (867), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 253/810 (31%), Positives = 392/810 (48%), Gaps = 107/810 (13%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
++ +R SFL+YF ++ H +V SS +VPY DD++ F NSGM QFK LG R
Sbjct: 5 TEKLRQSFLNYFA-SKSHKIVNSSSVVPYEDDTLLFTNSGMVQFKKNLLG-EKKDLRRAC 62
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
+ Q+C+R GGKHNDL G+D+YHHT+FEM+GNWSF DY+K + A EFL + + L
Sbjct: 63 SVQRCIRAGGKHNDLDDVGKDTYHHTYFEMMGNWSFGDYFKEEGIGFAWEFLVEV-LKLD 121
Query: 134 LDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSE 193
DRLY TY+ D+E+ IW + +P I K NFWEMG TGPCG +E
Sbjct: 122 TDRLYVTYYD-------ELDKESGRIWRKY-LPPSRIIAASYKDNFWEMGDTGPCGPCTE 173
Query: 194 IHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLV 253
IHYD G A VN D ++IEIWNIVFI + R ++ + PL + IDTG+G ERL+
Sbjct: 174 IHYDRIG-SRDASRLVNKDDPNVIEIWNIVFIEYNRTTS-GLAPLERKCIDTGIGLERLL 231
Query: 254 TILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVA 313
+IL + S Y D F +++ +E K + +T D ++R+++D+ R I V
Sbjct: 232 SILMDVKSNYLIDSFSTIIKAMESHCSFKYNDKAEST------DVAFRVVADHCRTIAVC 285
Query: 314 LADNM-FPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDS 370
+ D + F + LR ++R A+ + +V +K+G ++ EL A +G + E +
Sbjct: 286 VYDKVDFSNDGVGYVLRRILRRAVRYAHEVLGLKEG-VLGELVVVAAHAIG-IELESVEC 343
Query: 371 INKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLAR 430
+NK +L+ L+K +E+FN + E
Sbjct: 344 VNKEELLF------MRTLKKG--------------IERFNRLAE---------------- 367
Query: 431 DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASN 490
S +ISG+ F LYDTYG ++ + +A + + + + FE E SK +
Sbjct: 368 --SSNKISGEDLFLLYDTYGFPVDLTELMAVERNIEIDYTNFESCRQRAIEASKKSKGTK 425
Query: 491 VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRH 550
+ +ID+ FP TDD +KY+ + S + F V G+ V
Sbjct: 426 L-NIDIGMCSKFPPTDDSFKYER--NGVSAMFLFA---------VAGEDVIT-------- 465
Query: 551 ARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELAS 610
+ ++ +G++FDKT YA GGQ+ D G + + + G + + +
Sbjct: 466 -------EPCKIPKGIELGIVFDKTCFYAECGGQVGDTGKIIFRDDSGDTGVFNVTDTQA 518
Query: 611 LEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLTCTYQKS 670
+ G +VH G + S + D +R MR HT +HLLN LR V+ T Q+
Sbjct: 519 ILGFVVHKGALDGS----ASHQALQMYDYELRRRIMRNHTGTHLLNFFLRTVIK-TQQRG 573
Query: 671 CRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-----DRRHMRASELPFLT 725
V D+ DF G L+ + + VE+ IND I +V DRR +A + P
Sbjct: 574 SLVDPDKLRFDFE--GRKLTNEELEDVERKINDFIKKGAEVKAVILDRR--QAMDNP--- 626
Query: 726 HLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSI 785
++ + E YP++V +I + + +I +E C GTHV N I ++ + R I
Sbjct: 627 NIVRMQNEEYPENVRIITMQ-SDGLIIQEMCGGTHVTNVSDIGKFRIVSETGVSANTRRI 685
Query: 786 KCLTGDSSKAAVENGKHLSTAASFSQILNV 815
+TG + + + S ++NV
Sbjct: 686 VGVTGKKAHELDAEAELCLSKLSMGNVVNV 715
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 74/115 (64%), Gaps = 3/115 (2%)
Query: 806 AASFSQILNVGNI-PYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHN 864
A+ +I+N ++ PY DD++ F NSGM QFK LG R + Q+CIR GGKHN
Sbjct: 17 ASKSHKIVNSSSVVPYEDDTLLFTNSGMVQFKKNLLG-EKKDLRRACSVQRCIRAGGKHN 75
Query: 865 DLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
DL G+D+YHHT+FEM+GNWSF DY+K + A EFL + + L DRLY T+
Sbjct: 76 DLDDVGKDTYHHTYFEMMGNWSFGDYFKEEGIGFAWEFLVE-VLKLDTDRLYVTY 129
>gi|409437564|ref|ZP_11264673.1| alanyl-tRNA synthetase [Rhizobium mesoamericanum STM3625]
gi|408750600|emb|CCM75831.1| alanyl-tRNA synthetase [Rhizobium mesoamericanum STM3625]
Length = 886
Score = 338 bits (867), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 250/798 (31%), Positives = 379/798 (47%), Gaps = 110/798 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FLDYF GH +V SSP+VP D ++ F N+GM QFKNVF GL PY + +Q
Sbjct: 7 IRSTFLDYF-KKNGHEIVSSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEQRPYKTASTAQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K A +A +TK ++ R
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKERAIELAWNLITK-EFAIDAKR 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
L T + D+E ++W ++ G+P + I + NFW MG TGPCG SEI
Sbjct: 125 LLVTVY--------HTDDEAFNLWKKIAGLPDEKIIRIPTSDNFWAMGDTGPCGPCSEIF 176
Query: 196 YD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
YD G P S D + IEIWN+VF+ +++++ + + L + IDTG+G E
Sbjct: 177 YDHGDHIWGGPPGSP----EEDGDRFIEIWNLVFMQYEQITKEERIDLPRPSIDTGMGLE 232
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +LQ K YD DLF L+E E+V+G K G + S+R+++D+ R
Sbjct: 233 RVAAVLQGKHDNYDIDLFRALIEASEEVTGVKAEG---------ERRASHRVIADHLRSS 283
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+AD + P + LR ++R A+ +E + K+ L+ +L + + +G YPE+
Sbjct: 284 AFLIADGVLPSNEGRGYVLRRIMRRAMRHAE-LLGAKE-PLIWKLLPTLVQEMGRAYPEL 341
Query: 368 QDSINKIQLILG-EESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ + I L EE+R L + +++ + LG +
Sbjct: 342 VRAESLISETLKLEETRFRKTLERG-----------------LSLLSDATTTLGKGDM-- 382
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
+ G+ AF LYDTYG ++ Q+ A+++ + F + ER KA+
Sbjct: 383 ----------LDGETAFKLYDTYGFPLDLTQDALRAREIGVDISGFTDAM----ERQKAE 428
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT--FPCLDTNLVGIVIGDQVFCID 544
A S H+ + D+ ++ K F DT VI Q D
Sbjct: 429 ARS-----------HWAGSGDRATETIWFELREKHGATEFLGYDTESAEGVI--QAIVKD 475
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
++ A SG D +Q ++ ++T Y +GGQ+ D GV + + K+E
Sbjct: 476 GRSVDSAASG---DKVQ--------IVVNQTPFYGESGGQMGDTGV-----ISSDTAKIE 519
Query: 605 IGELASL-EGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
I + EG VH G VV KV G + VD R H+ +HLL+ ALR VL
Sbjct: 520 ITDTQKKGEGLFVHIGTVVEG-KVNAGDPVALTVDHARRSRLRANHSATHLLHEALREVL 578
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
T QK V + D S + + ++ D + VE+ N+++ V R M +
Sbjct: 579 GTHVAQKGSLVAPERLRFDVS-HPKPMTADELKVVEEMANEIVLQNSPVTTRLMSVDD-A 636
Query: 723 FLTHLTVIPGEIYPDDVILIDISD------KENVISREPCCGTHVFNTGHIESCTVIGYK 776
+ GE Y D+V ++ + + S E C GTHV TG I ++G
Sbjct: 637 IAEGAMALFGEKYGDEVRVVAMGEGVRGAKAGKPYSIELCGGTHVGATGQIGLIRILGES 696
Query: 777 SYNHGVRSIKCLTGDSSK 794
+ GVR I+ +TG+S++
Sbjct: 697 AVGAGVRRIEAVTGESAR 714
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 59/88 (67%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFKNVF GL PY + +QKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFTNAGMVQFKNVFTGLEQRPYKTASTAQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTK 905
FFEMLGN+SF DY+K A +A +TK
Sbjct: 89 FFEMLGNFSFGDYFKERAIELAWNLITK 116
>gi|261880084|ref|ZP_06006511.1| alanine-tRNA ligase [Prevotella bergensis DSM 17361]
gi|270333239|gb|EFA44025.1| alanine-tRNA ligase [Prevotella bergensis DSM 17361]
Length = 886
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 254/809 (31%), Positives = 378/809 (46%), Gaps = 114/809 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR S+ +F ++GH +V S+P+V D ++ F N+GM Q+K++ LG T P PR
Sbjct: 2 MTANEIRDSYKKFF-ESKGHVIVPSAPMVIKDDPTLMFTNAGMNQWKDIILG-TKEPEPR 59
Query: 72 V-ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
NSQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K A A EFL
Sbjct: 60 RRTNSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEGAIDYAWEFLVDVLH 119
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
P D LY T F GS + +P D+E W + +P DHI NFWEMG TGPCG
Sbjct: 120 LDPAD-LYVTVFEGSPEENIPRDDEAAKYWSK-HLPEDHIINGNKHDNFWEMGDTGPCGP 177
Query: 191 SSEIHYDMKGEPSSALAR------VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
SEIH D + P+ A+ VN D +IEIWNIVF+ R S ++ PL+ N ID
Sbjct: 178 CSEIHIDSR--PAEEKAKKPGRELVNMDDPQVIEIWNIVFMQFNRKSDGSLEPLAMNVID 235
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTT---------SNRTD 295
TG+GFERLV +LQ K S YDTD+F P+++ IE SG K YG FTT N+
Sbjct: 236 TGMGFERLVRMLQGKNSNYDTDIFQPIIKEIEIHSGKK-YG--FTTPSGKDGKAADNQEK 292
Query: 296 LDTSYRMLSDYSRMITVALADNMFP---DATAKLRNVVRDALLISEDVFKVKQGKLVKEL 352
+D + R+++D+ R + ++AD P A +R ++R A+ + + + K L
Sbjct: 293 IDIAMRVIADHLRTVAFSIADGQLPGNAKAGYVIRRILRRAVRYAYTFLDQRHAFMFKLL 352
Query: 353 SYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIM 412
I E +G YPE+ I ++ EE F LR
Sbjct: 353 PVLIQE-MGGTYPELPAQQELISRVMKEEEDSF--LRT---------------------- 387
Query: 413 EEPGLVLGVKYLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
L G++ L + R+ T++ G AF L+DTYG ++ + + L++ +
Sbjct: 388 ----LEKGIQLLNGDMEELREQGKTQLDGTKAFRLFDTYGFPLDLTELICRENGLSVDEQ 443
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDT 529
F ++ + KER++ AA V + D + LK + YDY Y+ N RY
Sbjct: 444 GFNAQMTKQKERARNAAA--VENSDWVVLKEG--EQEFVGYDYTEYECNITRYR------ 493
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
+ + ++ ++ D T Y GGQ+ D G
Sbjct: 494 -----------------------------KVTQKKKSFYEVMLDHTPFYGEMGGQVGDQG 524
Query: 590 VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
V L N + +++ + + VH ++ + P VD R H
Sbjct: 525 V--LVNEAE---TIDVIDTKRENNQSVH---IIRTLPKDPNAGFMACVDTDKRTASAANH 576
Query: 650 TTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +HLL+ AL++VL QK V +D DF+ + + ++ + + VE+ +N ++
Sbjct: 577 TATHLLDYALKKVLGDHVEQKGSYVSADTLRFDFAHF-QKVTDEELREVERLVNRLVRED 635
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIE 768
+D E + GE Y D V ++ S E C G H +TG I
Sbjct: 636 HPMDEHRDTPVEEAKKMGAVALFGEKYGDKVRVVRFGP-----SCEFCGGIHAKSTGCIG 690
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
++ S GVR I+ +TG + A+
Sbjct: 691 MFKILSESSVAAGVRRIEAMTGQKCEEAM 719
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRV-ANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
D ++ F N+GM Q+K++ LG T P PR NSQKC+RV GKHNDL G D+YHHT FE
Sbjct: 33 DPTLMFTNAGMNQWKDIILG-TKEPEPRRRTNSQKCLRVSGKHNDLEEVGHDTYHHTMFE 91
Query: 881 MLGNWSFNDYYKRDACRMALEFL 903
MLGNWSF DY+K A A EFL
Sbjct: 92 MLGNWSFGDYFKEGAIDYAWEFL 114
>gi|88802166|ref|ZP_01117694.1| alanyl-tRNA synthetase [Polaribacter irgensii 23-P]
gi|88782824|gb|EAR14001.1| alanyl-tRNA synthetase [Polaribacter irgensii 23-P]
Length = 872
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 253/802 (31%), Positives = 381/802 (47%), Gaps = 118/802 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR++FL++F + H +V S+P+V D ++ F+NSGM FK FLG R
Sbjct: 1 MKSQDIRATFLNFF-KEKSHLIVPSAPMVTKDDPTLMFINSGMAPFKEYFLGNAIPKNNR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+++SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 ISDSQKCLRVSGKHNDLEEVGYDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLTEV-YK 118
Query: 132 LPLDRLYFTYFGGS-DQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+ D LY T F G+ D L D E D+W + +P D I K K NFWEMG+ GPCG
Sbjct: 119 IDKDILYVTVFEGTEDADALEMDTEAYDLWKK-HIPEDRILKGNKKDNFWEMGAQGPCGP 177
Query: 191 SSEIHYDMKG----EPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH D++ E A +N D ++EIWN+VF+ R + ++ L +IDTG
Sbjct: 178 CSEIHVDIRSAEEKEKVDAKTLINGDHPHVVEIWNLVFMQFNRKADGSLEDLPNKHIDTG 237
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERL +LQN S YDTD+F P++ I ++ K YG SN+ D + R++SD+
Sbjct: 238 MGFERLCMVLQNVQSNYDTDIFKPIISEIGTITNTK-YG-----SNQQQ-DIATRVISDH 290
Query: 307 SRMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R + ++AD P T + + + F K+ + +L +++ +G +
Sbjct: 291 LRAVAFSIADGQLPSNTGAGYVIRRILRRAIRYGFTFLDKKEPFIYKLVDVLSKKMGTAF 350
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ D I+ ++ EE F +++ L+L V
Sbjct: 351 PELIDQKQLIENVIREEEASF-----------------------LKTLDKGLLLLDV--- 384
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
L EISG+ F LYDT+G ++ + A K TL + F+++L + K+RS+
Sbjct: 385 ---LISSTDSKEISGEKVFELYDTFGFPVDLTALILAEKGYTLDEKGFQEELQKQKKRSR 441
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
A + S D ++ +D YDT L T++
Sbjct: 442 AASESATEDWTVL-------VEDAVAEFVGYDT---------LKTSV------------- 472
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTNT 596
I R S+ ++ L+F+ T Y GGQ+ D G V Y+ +T
Sbjct: 473 --KITRYRKVTSVKDGEMYQ-----LVFNLTPFYPEGGGQVGDKGSLEDIHGNVVYILDT 525
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLN 656
+EN I+HF + + G + VE R R C HT +HLL+
Sbjct: 526 KKEN------------NVIIHFTKNLPK-HILEGFIAVVEEKQRYRTAC--NHTATHLLH 570
Query: 657 AALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRH 715
ALR+VL T QK V S DFS + + L+ D + VE ++N I+ ++ ++ +
Sbjct: 571 QALRKVLGTHVTQKGSAVHSKYLRFDFSHFSK-LTTDELFEVENFVNARISGKLPLEEQR 629
Query: 716 MRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTG---HIESCTV 772
+ + GE Y D V I S E C GTHV NT H + +
Sbjct: 630 NVPMQDAIDQGAMALFGEKYGDTVRAIKFG-----ASVELCGGTHVKNTSDLWHFKIKSE 684
Query: 773 IGYKSYNHGVRSIKCLTGDSSK 794
+G S G+R I+ +T D+ K
Sbjct: 685 VGVAS---GIRRIEAITNDAVK 703
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F+NSGM FK FLG R+++SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFINSGMAPFKEYFLGNAIPKNNRISDSQKCLRVSGKHNDLEEVGYDTYHHTLFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ + D LY T
Sbjct: 92 LGNWSFGDYFKKEAIAWAWELLTE-VYKIDKDILYVT 127
>gi|414161985|ref|ZP_11418232.1| alanyl-tRNA synthetase [Afipia felis ATCC 53690]
gi|410879765|gb|EKS27605.1| alanyl-tRNA synthetase [Afipia felis ATCC 53690]
Length = 886
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 246/800 (30%), Positives = 382/800 (47%), Gaps = 110/800 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS FL++F GH +V SSP+VP D ++ F N+GM QFKNVF GL PY R SQ
Sbjct: 7 IRSGFLNFFAK-NGHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEKRPYQRATTSQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF +Y+K A +A +TK +LP DR
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGNYFKDRAIELAWTLITKD-FALPKDR 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
L T + D+E D+W ++ G+P I + G NFW+MG TGPCG SEI
Sbjct: 125 LLVTVYA--------EDDEAFDLWKKIAGLPESKIIRIGTSDNFWQMGDTGPCGPCSEIF 176
Query: 196 YDMKGE-PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVT 254
+D + P + D + IEIWN+VF+ +++ PL IDTG+G ER+
Sbjct: 177 FDHGDKVPGGPPGSPDEDGDRFIEIWNLVFMQFDQIAPGNRNPLPHPSIDTGMGLERVAA 236
Query: 255 ILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVAL 314
+LQ K Y+ DLF+ L+ I +++GA P+G + S R+++D+ R + +
Sbjct: 237 VLQGKHDNYEIDLFVALIRAISELTGADPHG---------PMAPSLRVIADHLRASSFLI 287
Query: 315 ADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSI 371
AD + P + LR ++R A+ ++ + K L+ L + + +G YPE+ +
Sbjct: 288 ADGVLPSNEGRGYVLRRIMRRAMRHAQ-LLGAKD-PLMHRLVWALVREMGQAYPELVRAE 345
Query: 372 NKIQLILG-EESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLAR 430
I+ L EE+R L + G+ L ++ A
Sbjct: 346 ALIEETLKLEETRFRKTLDR-----------------------------GLAILDEKSAS 376
Query: 431 DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASN 490
G+ AFTLYDTYG ++ Q+ + + + +F + ER KAKA
Sbjct: 377 LHKGDMFDGETAFTLYDTYGFPLDLTQDALRNRGIGVDLASFTDAM----ERQKAKA--- 429
Query: 491 VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRH 550
+ + DT +++ FP + +G +
Sbjct: 430 -----------------RASWAGSGDTAAEKIWFPLREELGATEFLGYDTEIAEGVVTAL 472
Query: 551 ARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA--------YLTNTTQENGK 602
+ GAS+DS++ +A V + ++T Y +GGQ+ DIG+ +T+T ++ G
Sbjct: 473 VKDGASVDSLKAGDSASV--VLNQTPFYGESGGQVGDIGLLTGDGGVRFRVTDTQKKAGD 530
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA-HTTSHLLNAALRR 661
+ VH G + + G ++EVD R G +RA H+ +HLL+ ALR+
Sbjct: 531 L-----------FVHVGQLEQG-TLKKGAALQLEVD-HARRGAIRANHSATHLLHEALRQ 577
Query: 662 VLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL Q+ V + DF+ + + ++ D + +E ND++ +V R M E
Sbjct: 578 VLGDHIAQRGSLVSPERLRFDFA-HTKPITADELRRIEDIANDIVLENGEVATRLM-GIE 635
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKE-NVI--SREPCCGTHVFNTGHIESCTVIGYKS 777
+ + GE Y D+V ++ + N + S E C GTHV TG I ++ G +
Sbjct: 636 DARSSGARALFGEKYGDEVRVVSMGHGSGNTLGWSVELCGGTHVKRTGDIGLVSITGESA 695
Query: 778 YNHGVRSIKCLTGDSSKAAV 797
GVR I+ LTG +++ A
Sbjct: 696 VASGVRRIEALTGRAARNAA 715
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFKNVF GL PY R SQKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFTNAGMVQFKNVFTGLEKRPYQRATTSQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF +Y+K A +A +TK +LP DRL T
Sbjct: 89 FFEMLGNFSFGNYFKDRAIELAWTLITK-DFALPKDRLLVT 128
>gi|420374716|ref|ZP_14874664.1| alanyl-tRNA synthetase [Shigella flexneri 1235-66]
gi|391315937|gb|EIQ73437.1| alanyl-tRNA synthetase [Shigella flexneri 1235-66]
Length = 875
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 256/811 (31%), Positives = 380/811 (46%), Gaps = 141/811 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAAYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P SA D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSA----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S Y+ DLF L+E++ KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYEIDLFRSLIESVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLV 349
S R+++D+ R +AD + P + LR ++R A +L ++D F K
Sbjct: 279 KSLRVIADHIRSCAFLIADGVVPSNENRGYVLRRIIRRAVRHGNMLGAKDTFFYK----- 333
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
L + +++G E++ ++ +L + E EQF
Sbjct: 334 --LVGPLVDVMGSAGEELKRQQAMVEQVL------------------------KTEEEQF 367
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 368 ARTLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDE 422
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
FE + E +R +A+ AS D D ++ K Y + L+
Sbjct: 423 AGFEAAMEE--QRRRAREASGFG----ADYNAMIRVDGASEF--------KGYEYLELNG 468
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD-- 587
+ + + G ++D I +A V + D+T YA +GGQ+ D
Sbjct: 469 KVTALFV----------------DGKAVDVINAGQDAVV--VLDQTPFYAESGGQVGDKG 510
Query: 588 ----IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRL 643
G A+ N TQ+ G+ IG + L + G+ V + +VD R
Sbjct: 511 ELKGAGFAFAVNDTQKYGQA-IGHIGKLSAGSLKVGDAVQA-----------DVDEARRA 558
Query: 644 GCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN 702
H+ +HL++AALR VL T QK V DFS + E + + AVE +N
Sbjct: 559 RIRLNHSATHLMHAALREVLGTHVAQKGSLVNDKVLRFDFS-HTEAMKPAEIRAVEDLVN 617
Query: 703 DVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVF 762
I + ++ M E + GE Y D V ++ + D S E C GTH
Sbjct: 618 AQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDDHVRVLSMGD----FSTELCGGTHAS 672
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I +I GVR I+ +TG+ +
Sbjct: 673 RTGDIGLFRIISESGTAAGVRRIEAVTGEGA 703
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQYAWELLTGENWFALPKERLWVT 131
>gi|309243075|ref|NP_001035124.2| alanyl-tRNA synthetase, cytoplasmic isoform 2 [Danio rerio]
Length = 433
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/382 (45%), Positives = 235/382 (61%), Gaps = 12/382 (3%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP- 70
L + IR F+D+F + H V SS +P D ++ F N+GM QFK +FL +P
Sbjct: 5 LTAAQIREKFIDFFRRHE-HQYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPM 63
Query: 71 ----RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT 126
R AN+QKC+R GGKHNDL G+D YHHTFFEMLG+WSF DY+K AC+MALE LT
Sbjct: 64 ARLRRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKHLACKMALELLT 123
Query: 127 KPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTG 186
+ +P++RLY TYFGG GL D E + IWL+LG+ I MK NFWEMG TG
Sbjct: 124 QE-FGIPIERLYVTYFGGHADAGLEPDLECKQIWLDLGMEESRILPGSMKDNFWEMGDTG 182
Query: 187 PCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
PCG SEIHYD G +A VN D +++EIWN+VFI R S + PL K IDTG
Sbjct: 183 PCGPCSEIHYDRIGGRDAA-HLVNMDDPNVLEIWNLVFIQFNRESETVLKPLPKKSIDTG 241
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ERLV++LQNK S YDTDLF+P E I+K +GA+ Y + +D +YR+L+D+
Sbjct: 242 MGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARAYTGKVGAEDTDGIDMAYRVLADH 301
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+R IT+AL+D PD T + LR ++R A+ S + ++G L + + LGD
Sbjct: 302 ARTITIALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQRG-FFASLVDVVVKSLGDA 360
Query: 364 YPEIQDSINKIQLILGEESRIF 385
+PE++ + ++ I+ EE F
Sbjct: 361 FPELRKDPDMVKDIINEEEAQF 382
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP-----RVANSQKCIRVGGKHNDLSFAGRD 872
IP D ++ F N+GM QFK +FL +P R AN+QKCIR GGKHNDL G+D
Sbjct: 32 IPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMARLRRAANTQKCIRAGGKHNDLDDVGKD 91
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLG+WSF DY+K AC+MALE LT+ +P++RLY T+
Sbjct: 92 VYHHTFFEMLGSWSFGDYFKHLACKMALELLTQ-EFGIPIERLYVTY 137
>gi|332535100|ref|ZP_08410911.1| alanyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
gi|332035475|gb|EGI71972.1| alanyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
Length = 866
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 252/811 (31%), Positives = 377/811 (46%), Gaps = 116/811 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FLD+F + Q H +V SS ++P D ++ F N+GM QFK+VFLG PY R
Sbjct: 4 MTTAQIRQQFLDFFASKQ-HQIVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA + A EFLT+ V
Sbjct: 63 ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVK 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L T + DEE + W ++G+ D I + NFW MG TGPCG
Sbjct: 122 LPQEKLLVTIY--------HDDEEAFEYWSKDIGLSEDRIIRIATSDNFWSMGDTGPCGP 173
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI YD G P + D + IEIWN+VF+ + R S T++PL K +DT
Sbjct: 174 CSEIFYDHGEHIWGGPPGTP----EEDGDRFIEIWNLVFMQYNRQSDGTMLPLPKQSVDT 229
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ILQ S Y+ DLF L+ V+ A+ D S R+++D
Sbjct: 230 GMGLERISAILQGVHSNYEIDLFQGLIAAAASVTNAQDMD-----------DKSLRVVAD 278
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R ++D + P + LR ++R A+ + QG +L + E +G
Sbjct: 279 HIRSCAFLISDGVMPSNEGRGYVLRRIIRRAVRHGNKLG--AQGSFFYKLVAALIEQMGQ 336
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ +L RI E EQF E GL + +
Sbjct: 337 AYPELAKQQEIIEKVL----RI--------------------EEEQFGKTLERGLAILEE 372
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L+ D I GD+ F LYDTYG ++ ++A +++T+ H+ FE+ + +R
Sbjct: 373 SLS-----DLKGDIIPGDLVFKLYDTYGFPADLTADVARERQMTIDHQGFEECM--AVQR 425
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT-FPCLDTNLVGIVIGDQVF 541
A+ A K+ DY+ S++ T F D+
Sbjct: 426 KTAQQAG------------------KFGADYNEQLKSEKLTEFKGYDST----------- 456
Query: 542 CIDKHAIRHARSGASIDSIQLEHNAWVGL-IFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
H+ A +++QL + G+ + D+T YA +GGQ D G T
Sbjct: 457 ---HHSATVVEIFAGGEAVQLLEDGQQGIVVLDRTPFYAESGGQTGDTG-----TITVAG 508
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
G+ + L H G V V + + ++ +AR R + HT +H+L+ ALR
Sbjct: 509 GEFNVTNTTKLGNAFAHHGIVQGRIGVNDKVDATID-NAR-RDSIKKNHTATHILHEALR 566
Query: 661 RVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
++L QK V D DFS + E ++ D + +E+ +ND I ++ M
Sbjct: 567 QLLGDHVGQKGSLVQPDRLRFDFSHF-EAVTKDELREIERVVNDEIRRNFALNTELMAID 625
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
+ + + GE Y D+V ++ I D S E C GTHV G I ++
Sbjct: 626 DAKAKGAMALF-GEKYDDEVRVVTIGD----YSIELCGGTHVERAGDIGLFKIVSESGIA 680
Query: 780 HGVRSIKCLTGDSSKAAV-ENGKHLSTAASF 809
GVR I+ +TG + A V E + L A+
Sbjct: 681 AGVRRIEAVTGADAVAYVSEQEQQLHDVAAL 711
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 31 IPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQRCVRAGGKHNDLENVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K+DA + A EFLT+ V LP ++L T
Sbjct: 91 FFEMLGNFSFGDYFKQDAIKFAWEFLTE-VVKLPQEKLLVTI 131
>gi|282878226|ref|ZP_06287022.1| alanine--tRNA ligase [Prevotella buccalis ATCC 35310]
gi|281299644|gb|EFA92017.1| alanine--tRNA ligase [Prevotella buccalis ATCC 35310]
Length = 872
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 246/803 (30%), Positives = 376/803 (46%), Gaps = 115/803 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR SF +F ++GHT+V S+P+V D ++ F N+GM Q+K++ LG P PR
Sbjct: 1 MTANEIRESFKKFF-ESKGHTIVASAPMVIKDDPTLMFTNAGMNQWKDIILG-NKQPEPR 58
Query: 72 V-ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
A+SQKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+K A A E+L
Sbjct: 59 RRADSQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKEGAIDYAWEYLVDVLH 118
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
P D LY T F GS + +P D E W + +P DHI NFWEMG TGPCG
Sbjct: 119 LDPKD-LYVTVFEGSPEENIPHDSEAEKYWRK-HLPADHIINGNKHDNFWEMGDTGPCGP 176
Query: 191 SSEIHYDMKGEPSSAL----ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH D + + A VN D +IEIWNIVF+ R + ++ PLS N IDTG
Sbjct: 177 CSEIHVDSRSDEEKAQLPGRELVNKDHPQVIEIWNIVFMQFNRKADGSLEPLSMNVIDTG 236
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERLV +LQ K S YDT +F P + +E++SG K YG + D+D + R+++D+
Sbjct: 237 MGFERLVRMLQGKNSNYDTGIFQPFIHEMERLSGKK-YG------EQEDVDVAMRVVADH 289
Query: 307 SRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
R + ++AD P A +R ++R A+ + ++ + K L + E +G
Sbjct: 290 LRAVAFSIADGQLPSNAKAGYVIRRILRRAVRYAYTFLGQREAFVYKLLPVLVDE-MGGA 348
Query: 364 YPEIQDSINKIQLILGEESRIF-------DNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
YPE+ I ++ EE F NL A+ E K KTQ
Sbjct: 349 YPELVAQRELIGKVMKEEEDSFLRTLEKGINLLNNAMDELKKAGKTQ------------- 395
Query: 417 LVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKL 476
I G+ AF L+DTYG ++ + + ++ + F ++
Sbjct: 396 --------------------IDGEQAFRLFDTYGFPLDLTELICREHGFSVDEQQFNAEM 435
Query: 477 NELKERSKAKAASNVPDIDLMDLKHFPVTDDKY-KYDYHYDTNSKRYTFPCLDTNLVGIV 535
K++ +A+ A+ V + D ++++ + ++ YDY + C
Sbjct: 436 Q--KQKDRARNAAQVENSDWVEIRQ---GEQQFVGYDY--------TEYEC--------- 473
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
H +++ + + + N++ +I D T Y GGQ+ D GV
Sbjct: 474 ----------HILKYRK-------VTQKKNSFYEVILDFTPFYGEMGGQVGDQGV----- 511
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
E+ V++ + + +H ++ P VD R C HT +HLL
Sbjct: 512 LVSEHETVDVIDTKRENNQSIH---IIKQLPQHPEADFMACVDTDKRDACAANHTATHLL 568
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
+ AL++VL QK V D DFS + + ++ + + VE+ +N++I + +D
Sbjct: 569 DYALKQVLGDHVEQKGSYVSPDTLRFDFSHF-QKVTDEEIRQVERLVNNLIRQDIPLDEH 627
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
E + GE Y D V ++ S E C G H +TG I ++
Sbjct: 628 RDTPIEEAKEMGAIALFGEKYGDKVRVVRFGP-----SCEFCGGIHAKSTGRIGLFKILS 682
Query: 775 YKSYNHGVRSIKCLTGDSSKAAV 797
S GVR + +TG + A+
Sbjct: 683 ESSVAAGVRRFEAITGRKCEEAM 705
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRV-ANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
D ++ F N+GM Q+K++ LG P PR A+SQKC+RV GKHNDL GRD+YHHT FE
Sbjct: 32 DPTLMFTNAGMNQWKDIILG-NKQPEPRRRADSQKCLRVSGKHNDLEEVGRDTYHHTMFE 90
Query: 881 MLGNWSFNDYYKRDACRMALEFLT 904
MLGNWSF DY+K A A E+L
Sbjct: 91 MLGNWSFGDYFKEGAIDYAWEYLV 114
>gi|303249632|ref|ZP_07335837.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307252204|ref|ZP_07534102.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|302651444|gb|EFL81595.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306860348|gb|EFM92363.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
Length = 874
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 263/830 (31%), Positives = 396/830 (47%), Gaps = 146/830 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR SFLD+F +++GHT+V SS +VP D ++ F N+GM QFK+VFLGL PY R
Sbjct: 3 TTSEIRQSFLDFF-HSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEM+GN+SF DY+K DA + E+LT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEG-------MKCNFWEMG 183
LP ++LY T + D+E DIW ++ GVP DHI + G NFW MG
Sbjct: 122 LPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMG 173
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IE+WNIVF+ R++ T+ L
Sbjct: 174 DTGPCGPCTEIFYDHGETFWGGLPGSP----EEDGDRYIEVWNIVFMQFNRLADGTMEKL 229
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ ++Q+ S Y+TD+F L I++V+G N +DLD
Sbjct: 230 PKPSVDTGMGLERMTAVMQHVNSNYETDIFQTL---IKEVAG---------LLNVSDLDN 277
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLV 349
S R+++D+ R + +AD + P + LR ++R A LL +++ F K +
Sbjct: 278 KSLRVVADHIRACSYLIADGVVPSNEGRGYVLRRIIRRAVRHGNLLGAKEAFFYKLVPTL 337
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
+ + E+L IQ ++ + E EQF
Sbjct: 338 ATVMGHAGEVLTQKQAHIQKTL-------------------------------KAEEEQF 366
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L LTK +SG++AF LYDTYG ++ ++ +++T+
Sbjct: 367 ARTLERGLALLEDALTK-----VENNTLSGEVAFKLYDTYGFPLDLTADVCREREITIDE 421
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
FE ++ +ER AKA+SN D + + + + YD + + T L +
Sbjct: 422 AGFEAEMTAQRER--AKASSNFG----ADYNNVIKVEGQTDF-IGYDNLAAQATIVGLFS 474
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
N G ++D+IQ +A + I D+T YA GGQ+ D G
Sbjct: 475 N-----------------------GKAVDTIQSGESAVI--ILDQTPFYAEMGGQVGDSG 509
Query: 590 VA------YLTNTTQENGKV--EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
+ + N TQ+ G+V IG+L S G++ KVT VDA
Sbjct: 510 LISTEICNFAVNDTQKYGQVFGHIGQLTS--------GSLSIGDKVTA------TVDATR 555
Query: 642 RLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R+ H+ +HLL++ALR VL QK V + DFS E +S + +E+
Sbjct: 556 RVAITANHSATHLLHSALREVLGDHVAQKGSLVSENILRFDFS-QPEAISKSQLEEIERI 614
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I +QV M + + GE Y D V ++ +++ S E C GTH
Sbjct: 615 VNRKIRENIQVTIETMDIESAKKKGAMALF-GEKYGDVVRVVGMTE----FSIELCGGTH 669
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN-GKHLSTAASF 809
V TG I ++ + G+R ++ +T +++ + N K L +A F
Sbjct: 670 VQRTGDIGLFKLVSEGAVAAGIRRVEAVTAETAIEWLHNQQKVLQQSAEF 719
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL PY R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+K DA + E+LT P + LP ++LY T
Sbjct: 89 FFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEKLYVT 130
>gi|255534656|ref|YP_003095027.1| alanyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
gi|255340852|gb|ACU06965.1| Alanyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
Length = 893
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 249/817 (30%), Positives = 382/817 (46%), Gaps = 111/817 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FLDYF ++GH +V S+PIV D ++ F NSGM QFK+ FLG PR
Sbjct: 1 MTSQQIRQQFLDYF-QSKGHLIVPSAPIVLKDDPTLMFSNSGMTQFKDYFLGYKDPKAPR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL GRD+YHHT FEMLGNWSF DY+K +A A E LT+
Sbjct: 60 IADTQKCLRVSGKHNDLDDVGRDTYHHTMFEMLGNWSFGDYFKEEAIGFAWELLTE-VYK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+P + LY T F G L D++ + W + + I K NFWEMG +GPCG
Sbjct: 119 IPKEDLYVTVFEGDSVEDLARDQDAYNFW-KKHIDEGRIINGNKKDNFWEMGESGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ SAL VN D ++EIWN+VF+ R + ++ L ++DTG+
Sbjct: 178 SEIHVDLRTAEEKGMVSALDLVNNDHPQVVEIWNLVFMEFNRKADGSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
GFERL LQ KTS YDTD+F PL++ +E++SG + +T + D + R++ D+
Sbjct: 238 GFERLCMALQGKTSNYDTDVFTPLIQKVEEISGLR-----YTGILTDEKDIAIRVVVDHI 292
Query: 308 RMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R + A+AD P A +R ++R A+ + +K+ L EL + +G +
Sbjct: 293 RAVAFAIADGQLPSNGGAGYVIRRILRRAISYAYRFLGMKEAFLF-ELVGVLQTEMGSYF 351
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
E+ + ++ EE F +KT + LG+K +
Sbjct: 352 AELSRQQKLVTEVIKEEEISF--------------LKT--------------IELGLKRI 383
Query: 425 TKQLARDPSITE--ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
+ S E + G F LYDTYG ++ + +A ++LT+ F +++ + K+R
Sbjct: 384 DLVINDTISKNEKTLPGAAVFELYDTYGFPADLSRIIAEEQQLTIDEAGFNEEMAKQKQR 443
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
SK +A V D +++ K YD DT ++ Y
Sbjct: 444 SKKSSAQKVYDWVILEEKEQQFVG----YD---DTETETYI------------------- 477
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV------------ 590
R+ + ++ + + ++ K+ Y GGQ+ D G+
Sbjct: 478 -----TRYRK-------VENKDGEYYQIVLSKSPFYPEGGGQVGDHGILVPSYAKNFNIV 525
Query: 591 ---AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTP---GLTSRVEVDARMRLG 644
+L EN E+ + ++S K P G +V+ R
Sbjct: 526 SPQKFLDQLASENNSDRPSEVIEVLDTRKENNLIISLIKEMPKDAGAVFYAKVNRDERRN 585
Query: 645 CMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIND 703
H+ +HLL+ ALR VL T QK V + DFS + + L+ + + VE+ +N
Sbjct: 586 TQANHSVTHLLHEALREVLGTHVEQKGSFVGPEYLRFDFSHFAK-LTDEELKLVEEKVNT 644
Query: 704 VIANQVQVDR-RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVF 762
I + ++ R++ SE + + GE Y D+V +I SRE C GTHV
Sbjct: 645 KIKENISLEEFRNIPISEAMEKGAMALF-GEKYGDNVRMIQFG-----TSRELCGGTHVR 698
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN 799
NT I + S G+R I+ + GD + A N
Sbjct: 699 NTAEIGFFKIQSESSTAAGIRRIEAIAGDQATAYFNN 735
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK+ FLG PR+A++QKC+RV GKHNDL GRD+YHHT FEM
Sbjct: 32 DPTLMFSNSGMTQFKDYFLGYKDPKAPRIADTQKCLRVSGKHNDLDDVGRDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K +A A E LT+ +P + LY T
Sbjct: 92 LGNWSFGDYFKEEAIGFAWELLTE-VYKIPKEDLYVT 127
>gi|288819149|ref|YP_003433497.1| alanyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|384129896|ref|YP_005512509.1| alanyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|288788549|dbj|BAI70296.1| alanyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|308752733|gb|ADO46216.1| alanyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
Length = 871
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 257/810 (31%), Positives = 389/810 (48%), Gaps = 132/810 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ IR FL +F +GH V+S+P+VP D ++ FVN+GM FKNVFLG+ PY R
Sbjct: 2 FSTDEIRELFLSFF-EKKGHVRVRSAPLVPESDPTLLFVNAGMVPFKNVFLGIEKRPYTR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ QKC+RV GKHNDL G S HHTFFEMLGN+SF DY+K+ A A EF+T+ +
Sbjct: 61 AVSCQKCLRVSGKHNDLESVGYTSRHHTFFEMLGNFSFGDYFKKQAIEYAWEFITQ-YLK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP D+LY T F DEET IW ++G+ I K G + NFW+MG TGPCG
Sbjct: 120 LPEDKLYITVF--------EEDEETYRIWRDDIGLEEGRIWKRGEEDNFWQMGDTGPCGP 171
Query: 191 SSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
SSEIH+D KGE +E+WN+VF+ + R + PL K IDTG+G E
Sbjct: 172 SSEIHFD-KGEGEEG--------ERYLEVWNLVFMQYNRDEKGNLTPLPKPNIDTGMGLE 222
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ ++LQ + Y+ D+ PL+ E++S K YG +F ++D + R+++D+ R I
Sbjct: 223 RIASVLQKTKTNYEIDIIRPLVAFGEELS-QKRYGESF------EVDVALRVIADHLRAI 275
Query: 311 TVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKE-LSYN----IAEILGDVYP 365
T A++D + P R V +L + K G V+E Y + +I+ YP
Sbjct: 276 TFAISDGVLPSNVG--RGYVIRRILRRALRYAYKLG--VQEPFLYRGIDLVVDIMKRAYP 331
Query: 366 EIQDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
E++ SI ++ ++ GEE + + L+ A P+V+ + +
Sbjct: 332 ELETSIGFVKSVVKGEEEKFINTLKNAM-----PVVE--------------------EII 366
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
K L S ISG FTLYDTYG ++++++A K L + + FE+++ +E+++
Sbjct: 367 HKTLEEGRS--SISGAQVFTLYDTYGFPLDMLEDIAREKGLYVDMKGFEEQMELQREKAR 424
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLD-----TNLVGIVIGD 538
KHF +T + K Y H K F D T ++ I+
Sbjct: 425 ---------------KHFKITSKEVKPIYAHLKELGKTSQFVGYDQYQAETKVIAIIKDG 469
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI------GVAY 592
Q+ K KT YA GGQ+ D G +
Sbjct: 470 QMVSELKEGEEGELVLE------------------KTPFYAERGGQVGDKGFIRGEGAYF 511
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHTT 651
+ TQ + +EG I H G ++ S KV + + ++ + R R HT
Sbjct: 512 MVEDTQ----------SPVEGVITHIGKLIKGSLKVMDQVHAIIDRERRED--IRRNHTA 559
Query: 652 SHLLNAALRRVLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVIANQVQ 710
+HLL+A LR VL +++ + SD+ DF+ Y E L D ++ +E+ +N+ I +
Sbjct: 560 THLLHAVLRHVLGDHVRQAGSLVSDQYLRFDFTHY-EALDWDRLSRIEELVNEHIRQNYE 618
Query: 711 VDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESC 770
V ++ + + E Y D V +I + + +S+E C GTHV TG I
Sbjct: 619 VSVEETDYTKAIKEGAIAIFE-EKYSDRVRVITVGE----VSKELCGGTHVRRTGDIGYF 673
Query: 771 TVIGYKSYNHGVRSIKCLTGDSSKAAVENG 800
++ S GVR I TG + AVE+
Sbjct: 674 KIVSESSVGAGVRRIVAKTG---RWAVEDA 700
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ FVN+GM FKNVFLG+ PY R + QKC+RV GKHNDL G S HHT
Sbjct: 29 VPESDPTLLFVNAGMVPFKNVFLGIEKRPYTRAVSCQKCLRVSGKHNDLESVGYTSRHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K+ A A EF+T+ + LP D+LY T
Sbjct: 89 FFEMLGNFSFGDYFKKQAIEYAWEFITQ-YLKLPEDKLYIT 128
>gi|84500806|ref|ZP_00999041.1| alanyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
gi|84390873|gb|EAQ03291.1| alanyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
Length = 892
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 244/801 (30%), Positives = 371/801 (46%), Gaps = 109/801 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FL+YF QGH +V SSP+VP D ++ F NSGM QFKN+F G+ Y R +Q
Sbjct: 7 IRSTFLNYF-KRQGHEIVPSSPLVPRNDPTLMFANSGMVQFKNLFTGVETRDYSRATTAQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K +A A E +TK + +P DR
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKSEAIPFAWELVTK-ELGIPKDR 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
L T + D+E DIW ++ G+P D I + NFW+MG TGPCG +EI
Sbjct: 125 LLVTVY--------HTDDEAADIWKKVAGLPDDRIIRIPTADNFWQMGPTGPCGPCTEIF 176
Query: 196 YD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
+D G P S D + IEIWN+VF+ +++ T L IDTG+G E
Sbjct: 177 FDHGDKFWGGPPGSP----EEDGDRFIEIWNLVFMQYEQFEDGTRRELDAQSIDTGMGIE 232
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +LQ Y TDL L+E + ++P G T +R+++D+ R
Sbjct: 233 RVAALLQGTNDNYATDLMRALIEASAHQTSSEPDGPG---------KTHHRVIADHLRST 283
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+ +AD + P + LR ++R A+ + Q L+ L + +G+ YPE+
Sbjct: 284 SFLIADGVMPSNDGRGYVLRRIMRRAMRHAH--LLGAQDPLMHRLVPELVRQMGEAYPEL 341
Query: 368 QDSINKIQLILG-EESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ + I+ L EE+R L + G+K L
Sbjct: 342 RQAQALIEETLKLEETRFRQTLDR-----------------------------GLKLLDD 372
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
+L+ P + G+ AF LYDTYG ++ Q+ K T+ E F+ + E K +++A
Sbjct: 373 ELSGLPEDAALPGEAAFKLYDTYGFPLDLTQDALREKGRTVDTEGFDSAMAEQKAKARAA 432
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A + DL F + D D+ YDT + Q+ +
Sbjct: 433 WAGSGESADLS--VWFDLADQHGATDFLGYDTETAE----------------GQILAL-- 472
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
R G ++ ++ W+ + ++T Y AGGQ+ D G ++ E+ +
Sbjct: 473 -----IRDGEQVEELKSGEQGWI--VTNQTPFYGEAGGQVGDTG--WIRRLENEDEIATV 523
Query: 606 GELASLEGKIVHFGNVV---SSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
+ + ++ NV SF+ + + +EVD R H+ +HLL+ ALR
Sbjct: 524 TDTQKMGAGRIYAHNVTIDQGSFRASDAVA--LEVDHGRRATIRANHSATHLLHEALREA 581
Query: 663 LT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L Q+ D DFS + LS + +A +E+ +N I V+ R M +
Sbjct: 582 LGDHVAQRGSLNAPDRLRFDFS-HSAALSPEELARIERDVNAFIRQNTPVETRIMTPDDA 640
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKE-------NVISREPCCGTHVFNTGHIESCTVIG 774
L + GE Y D+V ++ + K N S E C GTHV TG I + +
Sbjct: 641 RGLGAQALF-GEKYGDEVRVVSMGQKATGKGAGGNTYSIELCGGTHVARTGDIGAFALTS 699
Query: 775 YKSYNHGVRSIKCLTGDSSKA 795
+ + GVR I+ LTG+++ A
Sbjct: 700 ETASSAGVRRIEALTGEAALA 720
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFKN+F G+ Y R +QKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFANSGMVQFKNLFTGVETRDYSRATTAQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K +A A E +TK + +P DRL T
Sbjct: 89 FFEMLGNFSFGDYFKSEAIPFAWELVTK-ELGIPKDRLLVT 128
>gi|254360816|ref|ZP_04976963.1| alanine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|261495705|ref|ZP_05992149.1| alanine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|452745287|ref|ZP_21945123.1| alanyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
gi|153092290|gb|EDN73359.1| alanine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|261308617|gb|EEY09876.1| alanine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|452086680|gb|EME03067.1| alanyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
Length = 875
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 264/829 (31%), Positives = 393/829 (47%), Gaps = 135/829 (16%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR SFL++F T+GHT+V SS +VP D ++ F N+GM QFK+VFLGL PY R
Sbjct: 3 TTSDIRQSFLEFF-QTKGHTIVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYSRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEM+GN+SF DY+K+DA + EFLT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKQDAIKFGWEFLTSPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP ++LY T + D+E DIW E+GVP +HI + G NFW MG
Sbjct: 122 LPKEKLYVTVY--------ETDDEAYDIWHKEVGVPSEHIIRIGDNKGAPYASDNFWAMG 173
Query: 184 STGPCGYSSEIHYDMKGEPSSAL-ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
TGPCG +EI YD E L D + IE+WNIVF+ R++ T+ L K
Sbjct: 174 DTGPCGPCTEIFYDHGPEHWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLPKPS 233
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT-SYR 301
+DTG+G ER+ ++Q+ S Y+TD+F L++ + T N DLD S R
Sbjct: 234 VDTGMGLERMTAVMQHVNSNYETDIFQTLIKEVA------------TLLNVKDLDNKSLR 281
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQG---KLVKELSYN 355
+++D+ R + +AD + P + LR ++R A+ ++ K+ KLV L+
Sbjct: 282 VVADHIRACSYLIADGVLPSNEGRGYVLRRIIRRAVRHG-NILGAKEAFFYKLVPTLATV 340
Query: 356 IAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
+ + G+V + Q I K + E EQF E
Sbjct: 341 MGQA-GEVLTQKQAHIQKT---------------------------LKAEEEQFARTLER 372
Query: 416 GLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQK 475
GL L L + LA+ + T +SG++AF LYDTYG ++ ++ + + + + F +
Sbjct: 373 GLNL----LEEALAKVENNT-LSGEVAFKLYDTYGFPLDLTADVCRERDIKIDEDGFNAE 427
Query: 476 LNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ +ER+KA ++ D + D K + + +T+ T L +N
Sbjct: 428 MTAQRERAKASSSFGT------DYNNVIKVDSKTCFSGYTETSLNDATVIGLFSN----- 476
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--VAYL 593
G S++SIQ NA V I DKT YA GGQ+ D G A +
Sbjct: 477 ------------------GKSVESIQSGENAVV--ILDKTPFYAEMGGQVGDSGQISAEI 516
Query: 594 TN----TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
N TQ+ G+V G + L + G+ V++ VD R H
Sbjct: 517 CNFEVVDTQKYGQV-FGHIGQLTSGSLSVGDKVNTI-----------VDRERRHAITLNH 564
Query: 650 TTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
+ +HLL++ALR+VL QK V + D S E ++ + VE+ +N +
Sbjct: 565 SATHLLHSALRQVLGDHVAQKGSLVSENILRFDIS-QPEAITKSQLEEVERIVNAKVREN 623
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIE 768
+QV M + + GE Y + V ++++SD S E C GTHV TG I
Sbjct: 624 IQVIIEEMDIESAKAKGAMALF-GEKYGEVVRVVEMSD----FSIELCGGTHVKQTGDIG 678
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSKA-------AVENGKHLSTAASFS 810
+ + GVR I+ +TG+++ A AV+ L A S S
Sbjct: 679 LFKITSEGAVAAGVRRIEAVTGENAIAWLHTLQQAVQQSAELLKADSHS 727
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL PY R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPENDPTLLFTNAGMNQFKDVFLGLEKRPYSRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+K+DA + EFLT P + LP ++LY T
Sbjct: 89 FFEMMGNFSFGDYFKQDAIKFGWEFLTSPQWLGLPKEKLYVT 130
>gi|304383973|ref|ZP_07366429.1| alanine--tRNA ligase [Prevotella marshii DSM 16973]
gi|304334865|gb|EFM01139.1| alanine--tRNA ligase [Prevotella marshii DSM 16973]
Length = 875
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 254/791 (32%), Positives = 369/791 (46%), Gaps = 105/791 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR S+ +F +GHT+V S+P+V D ++ F N+GM Q+K++ LG T P PR
Sbjct: 4 MTANEIRDSYKKFF-EEKGHTIVPSAPMVIKDDPTLMFTNAGMNQWKDIILG-TGNPEPR 61
Query: 72 V-ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
A+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L
Sbjct: 62 RRADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIDYAWEYLVDVLQ 121
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
P D LY T F GS + L D E W E +P DHI K NFWEMG TGPCG
Sbjct: 122 LDPKD-LYVTVFEGSPEEQLEYDSEAASYW-EKHLPADHIIKGNKHDNFWEMGDTGPCGP 179
Query: 191 SSEIHYDM-----KGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D K E S A A VN D +IEIWNIVF+ + R + + PLS IDT
Sbjct: 180 CSEIHLDSRTPQEKAEISGA-ALVNKDNPQVIEIWNIVFMQYVRKANGALEPLSMKVIDT 238
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERLV LQ K S YDTD+F P++ I K+SG T+ +TD+ + R+++D
Sbjct: 239 GMGFERLVRALQGKNSNYDTDIFQPIIREITKLSGI-----TYGAEEQTDV--AMRVVAD 291
Query: 306 YSRMITVALADNMFP---DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R + ++AD P A +R ++R A+ + K+ L + L I E +GD
Sbjct: 292 HLRAVAFSIADGQLPGNAKAGYVIRRILRRAVRYAYTFLGQKEAFLHRLLPVLIKE-MGD 350
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I ++ EE F LR L G+
Sbjct: 351 AYPELPAQRELIGRVMKEEEDSF--LRT--------------------------LEKGIN 382
Query: 423 YLTKQLARDPSITE--ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
LT ++ R + + G AF L+DTYG ++ + + ++ F ++ K
Sbjct: 383 LLTAEIERMQTEGRKVLDGVQAFRLFDTYGFPLDLTELICREHGYSVDEAQFNAEMQ--K 440
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
++ +A+ A+ V + D + L+ Y Y H C
Sbjct: 441 QKDRARNAAQVENSDWVALRQGEQQFVGYDYTEH----------EC-------------- 476
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
H +R+ + + + N + L+ D T Y GGQ+ D GV E+
Sbjct: 477 -----HILRYRK-------VTQKKNTYFELVLDYTPFYGEMGGQVGDTGV-----LVSED 519
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
VE+ + + +H +VS+ VD R HT +HLL+ L+
Sbjct: 520 ETVEVIDTKRENNQSIH---IVSALPKNLEANFMACVDTEKRAASAANHTATHLLDYVLK 576
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
+VL QK V +D DFS + + ++ D + VE+ +N +I + +D
Sbjct: 577 QVLGEHVEQKGSYVSADTLRFDFSHF-QKVTDDELRQVERMVNAMIRQDIPLDEHRDTPI 635
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
E + GE Y D V ++ S E C G H +TG I ++ S
Sbjct: 636 EEAKQMGAISLFGEKYGDKVRVVRFGP-----SCEFCGGIHAASTGRIGMFKIVSESSVA 690
Query: 780 HGVRSIKCLTG 790
G+R I+ LTG
Sbjct: 691 AGIRRIEALTG 701
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRV-ANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
D ++ F N+GM Q+K++ LG T P PR A+SQKC+RV GKHNDL G D+YHHT FE
Sbjct: 35 DPTLMFTNAGMNQWKDIILG-TGNPEPRRRADSQKCLRVSGKHNDLEEVGHDTYHHTMFE 93
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K++A A E+L P D LY T
Sbjct: 94 MLGNWSFGDYFKKEAIDYAWEYLVDVLQLDPKD-LYVT 130
>gi|345871858|ref|ZP_08823800.1| alanyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
gi|343919914|gb|EGV30655.1| alanyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
Length = 867
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 262/807 (32%), Positives = 376/807 (46%), Gaps = 129/807 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S +R+SFLDYF Q H V SSP+VP D ++ F N+GM QFK +FLG Y R
Sbjct: 2 ITSAELRASFLDYFAQRQ-HAEVASSPLVPANDPTLLFTNAGMVQFKELFLGRERRAYNR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+KR+A A E+LT+ +S
Sbjct: 61 AVSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIGFAWEYLTQV-LS 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RL+ T F D+E DIWL E+GV + G K NFW MG TGPCG
Sbjct: 120 LPPERLWVTVF--------EDDDEAADIWLKEIGVDAKRFSRCGAKDNFWSMGDTGPCGP 171
Query: 191 SSEIHYD-MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
SEI YD P + D + +EIWN+VF+ R + + PL + +DTG+G
Sbjct: 172 CSEIFYDHGPEIPGGPPGSPDEDGDRYVEIWNLVFMQFNRDAEGKMTPLPRPSVDTGMGL 231
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERL + Q S YD DLF L+E +V+G ++R D S R+++D+ R
Sbjct: 232 ERLAAVKQGVHSNYDIDLFRHLIEAAAEVTGC---------ADRAD--KSLRVIADHIRS 280
Query: 310 ITVALADNMFPDATAK---LRNVVRDA------LLISEDVFKVKQGKLVKELSYNIAEIL 360
+ D + P + LR ++R A L S+ F LV E+
Sbjct: 281 TAFLIIDGVTPSNEGRGYVLRRIMRRAIRHGYRLGCSDPFFHRLVAPLVVEM-------- 332
Query: 361 GDVYPEIQDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
GD YPE++ + ++ LI EE R + L
Sbjct: 333 GDAYPELKSAQAHVERLIKLEEERFAETLDH----------------------------- 363
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
G++ L + +A S I G+ F LYDTYG ++ ++A + LTL E FE +
Sbjct: 364 GMRILDEAIA-GLSGDRIPGETVFKLYDTYGFPTDLTADIARERGLTLDMEGFESAMGAQ 422
Query: 480 KERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
KER A+AAS ++++ V G+
Sbjct: 423 KER--ARAASQFGATQTLEIQ----------------------------------VQGET 446
Query: 540 VFCIDKHAIRHA------RSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
FC + A R G S D+++ V + D T Y +GGQ+ D G +L
Sbjct: 447 DFCGYERLREEATVVALYRDGVSCDALESGEEGLV--VLDITPFYGESGGQVGDHG--WL 502
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
+ T V+ + G ++H G V+ +T G VDA RL H+ +H
Sbjct: 503 STETARFEVVDTQKKGG--GVMIHVGRVLEG-SLTVGDRVDARVDAERRLETALNHSATH 559
Query: 654 LLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIANQVQV 711
LL+AALR+VL QK V + DFS + E +S + + +E+ +N +V AN + V
Sbjct: 560 LLHAALRQVLGDHVQQKGSLVGPERLRFDFSHF-EPVSREQLLEIERLVNREVRANHL-V 617
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
+ R M + + + GE Y D V ++ + D S E C GTHV G I
Sbjct: 618 ETRIMSLDDAKASGAMALF-GEKYADQVRVLRMGD----FSTELCGGTHVKAVGDIGLVK 672
Query: 772 VIGYKSYNHGVRSIKCLTGDSSKAAVE 798
++ GVR I+ +TG ++ VE
Sbjct: 673 IVNETGIAAGVRRIEAITGAAALDWVE 699
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK +FLG Y R +SQ+C+R GGKHNDL G + HHT
Sbjct: 29 VPANDPTLLFTNAGMVQFKELFLGRERRAYNRAVSSQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KR+A A E+LT+ +SLP +RL+ T
Sbjct: 89 FFEMLGNFSFGDYFKREAIGFAWEYLTQ-VLSLPPERLWVT 128
>gi|307261112|ref|ZP_07542790.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
str. 1096]
gi|306869194|gb|EFN00993.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
str. 1096]
Length = 874
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 264/830 (31%), Positives = 396/830 (47%), Gaps = 146/830 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR SFLD+F +++GHT+V SS +VP D ++ F N+GM QFK+VFLGL PY R
Sbjct: 3 TTSEIRQSFLDFF-HSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEM+GN+SF DY+K DA + E+LT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEG-------MKCNFWEMG 183
LP ++LY T + D+E DIW ++ GVP DHI + G NFW MG
Sbjct: 122 LPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMG 173
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IE+WNIVF+ R++ T+ L
Sbjct: 174 DTGPCGPCTEIFYDHGETFWGGLPGSP----EEDGDRYIEVWNIVFMQFNRLADGTMEKL 229
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ ++Q+ S Y+TD+F L I++V+G N +DLD
Sbjct: 230 PKPSVDTGMGLERMTAVMQHVNSNYETDIFQTL---IKEVAG---------LLNVSDLDN 277
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLV 349
S R+++D+ R + +AD + P ++ LR ++R A LL +++ F K +
Sbjct: 278 KSLRVVADHIRACSYLIADGVVPSNESRGYVLRRIIRRAVRHGNLLGAKEAFFYKLVPTL 337
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
+ + E+L IQ ++ + E EQF
Sbjct: 338 ATVMGHAGEVLTQKQAHIQKTL-------------------------------KAEEEQF 366
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L LTK +SG++AF LYDTYG ++ ++ ++LT+
Sbjct: 367 ARTLERGLALLEDALTK-----VENNTLSGEVAFKLYDTYGFPLDLTADVCRERELTIDE 421
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
FE ++ +ER AKA+SN D + + + + YD + T L +
Sbjct: 422 AGFEAEMTAQRER--AKASSNFG----TDYNNVIKVEGQTDF-IGYDNLEAQATIVGLFS 474
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
N G ++D+IQ +A + I D+T YA GGQ+ D G
Sbjct: 475 N-----------------------GKAVDTIQSGESAVI--ILDQTPFYAEMGGQVGDSG 509
Query: 590 VA------YLTNTTQENGKV--EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
+ + N TQ+ G+V IG+L S G++ KVT VDA
Sbjct: 510 LISTEICNFAVNDTQKYGQVFGHIGQLTS--------GSLSIGDKVTA------TVDATR 555
Query: 642 RLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R+ H+ +HLL++ALR VL QK V + DFS E +S + +E+
Sbjct: 556 RVAITANHSATHLLHSALREVLGDHVAQKGSLVSENILRFDFS-QPEAISKSQLEEIERI 614
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I +QV M + + GE Y D V ++ +++ S E C GTH
Sbjct: 615 VNRKIRENIQVTIETMDIESAKKKGAMALF-GEKYGDVVRVVGMTE----FSIELCGGTH 669
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN-GKHLSTAASF 809
V TG I ++ + G+R ++ +T +++ + N K L +A F
Sbjct: 670 VQRTGDIGLFKLVSEGAVAAGIRRVEAVTAETAIEWLHNQQKVLQQSAEF 719
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL PY R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+K DA + E+LT P + LP ++LY T
Sbjct: 89 FFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEKLYVT 130
>gi|261492574|ref|ZP_05989127.1| alanine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261311733|gb|EEY12883.1| alanine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 875
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 262/826 (31%), Positives = 389/826 (47%), Gaps = 129/826 (15%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR SFL++F T+GHT+V SS +VP D ++ F N+GM QFK+VFLGL PY R
Sbjct: 3 TTSDIRQSFLEFF-QTKGHTIVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYSRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEM+GN+SF DY+K+DA + EFLT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKQDAIKFGWEFLTSPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP ++LY T + D+E DIW E+GVP +HI + G NFW MG
Sbjct: 122 LPKEKLYVTVY--------ETDDEAYDIWHKEVGVPSEHIIRIGDNKGAPYASDNFWAMG 173
Query: 184 STGPCGYSSEIHYDMKGEPSSAL-ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
TGPCG +EI YD E L D + IE+WNIVF+ R++ T+ L K
Sbjct: 174 DTGPCGPCTEIFYDHGPEHWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLPKPS 233
Query: 243 IDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT-SYR 301
+DTG+G ER+ ++Q+ S Y+TD+F L++ + T N DLD S R
Sbjct: 234 VDTGMGLERMTAVMQHVNSNYETDIFQTLIKEVA------------TLLNVKDLDNKSLR 281
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAE 358
+++D+ R + +AD + P + LR ++R A V+ G
Sbjct: 282 VVADHIRACSYLIADGVLPSNEGRGYVLRRIIRRA---------VRHGN----------- 321
Query: 359 ILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
ILG + + ++G+ + + K K E EQF E GL
Sbjct: 322 ILGTKEAFFYKLVPTLATVMGQAGEVLTQKQAHIQKTLK------AEEEQFARTLERGLN 375
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
L L + LA+ + T +SG++AF LYDTYG ++ ++ + + + + F ++
Sbjct: 376 L----LEEALAKVENNT-LSGEVAFKLYDTYGFPLDLTADVCRERDIKIDEDGFNAEMTA 430
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
+ER+KA ++ D + D K + + +T+ T L +N
Sbjct: 431 QRERAKASSSFGT------DYNNVIKVDSKTCFSGYTETSLNDATVIGLFSN-------- 476
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--VAYLTN- 595
G S++SIQ NA V I DKT YA GGQ+ D G A + N
Sbjct: 477 ---------------GKSVESIQSGENAVV--ILDKTPFYAEMGGQVGDSGQISAEICNF 519
Query: 596 ---TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
TQ+ G+V G + L + G+ V++ VD R H+ +
Sbjct: 520 EVVDTQKYGQV-FGHIGQLTSGSLSVGDKVNTI-----------VDRERRHAITLNHSAT 567
Query: 653 HLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL++ALR+VL QK V + D S E ++ + VE+ +N + +QV
Sbjct: 568 HLLHSALRQVLGDHVAQKGSLVSENILRFDIS-QPEAITKSQLEEVERIVNAKVRENIQV 626
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
M + + GE Y + V ++++SD S E C GTHV TG I
Sbjct: 627 IIEEMDIESAKAKGAMALF-GEKYGEVVRVVEMSD----FSIELCGGTHVKQTGDIGLFK 681
Query: 772 VIGYKSYNHGVRSIKCLTGDSSKA-------AVENGKHLSTAASFS 810
+ + GVR I+ +TG+++ A AV+ L A S S
Sbjct: 682 ITSEGAVAAGVRRIEAVTGENAIAWLHTLQQAVQQSAELLKADSHS 727
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL PY R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPENDPTLLFTNAGMNQFKDVFLGLEKRPYSRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+K+DA + EFLT P + LP ++LY T
Sbjct: 89 FFEMMGNFSFGDYFKQDAIKFGWEFLTSPQWLGLPKEKLYVT 130
>gi|303253696|ref|ZP_07339833.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307247624|ref|ZP_07529667.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|302647421|gb|EFL77640.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|306855894|gb|EFM88054.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
Length = 874
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 264/830 (31%), Positives = 395/830 (47%), Gaps = 146/830 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR SFLD+F +++GHT+V SS +VP D ++ F N+GM QFK+VFLGL PY R
Sbjct: 3 TTSEIRQSFLDFF-HSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEM+GN+SF DY+K DA + E+LT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEG-------MKCNFWEMG 183
LP ++LY T + D+E DIW ++ GVP DHI + G NFW MG
Sbjct: 122 LPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMG 173
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IE+WNIVF+ R++ T+ L
Sbjct: 174 DTGPCGPCTEIFYDHGETFWGGLPGSP----EEDGDRYIEVWNIVFMQFNRLADGTMEKL 229
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ ++Q+ S Y+TD+F L I++V+G N +DLD
Sbjct: 230 PKPSVDTGMGLERMTAVMQHVNSNYETDIFQTL---IKEVAG---------LLNVSDLDN 277
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLV 349
S R+++D+ R + +AD + P + LR ++R A LL +++ F K +
Sbjct: 278 KSLRVVADHIRACSYLIADGVVPSNEGRGYVLRRIIRRAVRHGNLLGAKEAFFYKLVPTL 337
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
+ + E+L IQ ++ + E EQF
Sbjct: 338 ATVMGHAGEVLTQKQAHIQKTL-------------------------------KAEEEQF 366
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L LTK +SG++AF LYDTYG ++ ++ ++LT+
Sbjct: 367 ARTLERGLALLEDALTK-----VENNTLSGEVAFKLYDTYGFPLDLTADVCRERELTIDE 421
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
FE ++ +ER AKA+SN D + + + + YD + T L +
Sbjct: 422 AGFEAEMTAQRER--AKASSNFG----TDYNNVIKVEGQTDF-IGYDNLEAQATIVGLFS 474
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
N G ++D+IQ +A + I D+T YA GGQ+ D G
Sbjct: 475 N-----------------------GKAVDTIQSGESAVI--ILDQTPFYAEMGGQVGDSG 509
Query: 590 VA------YLTNTTQENGKV--EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
+ + N TQ+ G+V IG+L S G++ KVT VDA
Sbjct: 510 LISTEICNFAVNDTQKYGQVFGHIGQLTS--------GSLSIGDKVTA------TVDATR 555
Query: 642 RLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R+ H+ +HLL++ALR VL QK V + DFS E +S + +E+
Sbjct: 556 RVAITANHSATHLLHSALREVLGDHVAQKGSLVSENILRFDFS-QPEAISKSQLEEIERI 614
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I +QV M + + GE Y D V ++ +++ S E C GTH
Sbjct: 615 VNRKIRENIQVTIETMDIESAKKKGAMALF-GEKYGDVVRVVGMTE----FSIELCGGTH 669
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN-GKHLSTAASF 809
V TG I ++ + G+R ++ +T +++ + N K L +A F
Sbjct: 670 VQRTGDIGLFKLVSEGAVAAGIRRVEAVTAETAIEWLHNQQKVLQQSAEF 719
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL PY R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+K DA + E+LT P + LP ++LY T
Sbjct: 89 FFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEKLYVT 130
>gi|39995259|ref|NP_951210.1| alanyl-tRNA ligase [Geobacter sulfurreducens PCA]
gi|409910706|ref|YP_006889171.1| alanyl-tRNA synthetase [Geobacter sulfurreducens KN400]
gi|48428506|sp|P61701.1|SYA_GEOSL RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|39982021|gb|AAR33483.1| alanyl-tRNA synthetase [Geobacter sulfurreducens PCA]
gi|298504264|gb|ADI82987.1| alanyl-tRNA synthetase [Geobacter sulfurreducens KN400]
Length = 875
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 250/804 (31%), Positives = 380/804 (47%), Gaps = 126/804 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ K IR+ FL +F + +GH +V SSP++P+ D ++ F N+GM QFK+ FLGL Y R
Sbjct: 1 MTGKEIRARFLKFFAD-RGHAVVPSSPLIPHNDPTLLFANAGMNQFKDCFLGLEKRDYVR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQKCVR GGKHNDL GR + HHTFFEMLGN+SF DY+K++A A EFLTK +
Sbjct: 60 ACSSQKCVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIAFAWEFLTKD-LG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
L DRLY T + +D D+E DIW L+ GVPR+ I + G K NFW MG TGPCG
Sbjct: 119 LDKDRLYVTVY--TD------DDEAADIWHLQEGVPRERIYRFGEKDNFWAMGDTGPCGP 170
Query: 191 SSEIHYDMK-----GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI +D G P A V D + +EIWN VF+ R + + PL K +DT
Sbjct: 171 CSEIFWDNGPEVGCGSPDCA---VGCDCDRYMEIWNNVFMQFNRSADGVLTPLPKPSVDT 227
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ T++Q S YDTDLF ++ +EK+SG + + S + D+ S R+++D
Sbjct: 228 GMGLERISTVMQGVKSNYDTDLFQGIIGHVEKLSGKR-----YRHSEKDDV--SMRVMAD 280
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R T + D + P + LR ++R A ++ + + ++ + + ++GD
Sbjct: 281 HVRATTFLICDGVLPSNEGRGYVLRRIMRRAARHAKMLGFAE--PVICRMVEAVNAMMGD 338
Query: 363 VYPEIQDSINKI-QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
YPE+ + I ++I EE R + L + G+
Sbjct: 339 AYPELLEREEYIRKVIRAEEERFAETLDR-----------------------------GL 369
Query: 422 KYLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
L + +A ++ T I G+ F LYDT+G ++ ++ ++ T+ + FE +
Sbjct: 370 AILNEAVADLKNEGRTVIPGETLFRLYDTFGFPTDLTADIVRSEGFTIDEDGFEACMERQ 429
Query: 480 KERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSK--RYTFPCLDTNLVGIVIG 537
+E+++ +H+ + ++ + H +S+ R F + +
Sbjct: 430 REQAR---------------EHWKGSGEEGIAEVHKTLHSRGVRSRFTGYEARTAYSPV- 473
Query: 538 DQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTT 597
V + A +G ++ +I D T Y +GGQ+ D G +
Sbjct: 474 -TVLLKGGAEVAEATAGDRVE-----------IITDATPFYGESGGQVGDTG-----TIS 516
Query: 598 QENGKVEIGE-LASLEGKIVHFGNVVSS---------FKVTPGLTSRVEVDARMRLGCMR 647
+ VE+ E L IVH G VV KV PG R R
Sbjct: 517 TGSAHVEVTETLRPFPDLIVHRGTVVEGTIRQGDACDLKVAPG-----------RDATAR 565
Query: 648 AHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIA 706
HT +HLL +ALR+VL Q V D DF+ + ++ + + VE+ +N I
Sbjct: 566 NHTATHLLQSALRQVLGDHVKQSGSLVGPDRLRFDFTHFA-AMTPEEIRRVEEIVNSCIM 624
Query: 707 NQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGH 766
V R M E T + GE Y D V ++ + + +S E C GTHV G
Sbjct: 625 ANDDVHAREMALDE-AMEIGATALFGEKYGDTVRVVRVGE----VSMELCGGTHVHAAGD 679
Query: 767 IESCTVIGYKSYNHGVRSIKCLTG 790
I ++ GVR I+ LTG
Sbjct: 680 IGFFKILSEAGIAAGVRRIEALTG 703
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP+ D ++ F N+GM QFK+ FLGL Y R +SQKC+R GGKHNDL GR + HHT
Sbjct: 28 IPHNDPTLLFANAGMNQFKDCFLGLEKRDYVRACSSQKCVRAGGKHNDLENVGRTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K++A A EFLTK + L DRLY T
Sbjct: 88 FFEMLGNFSFGDYFKKEAIAFAWEFLTK-DLGLDKDRLYVT 127
>gi|120602949|ref|YP_967349.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
gi|205830078|sp|A1VEQ6.1|SYA_DESVV RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|120563178|gb|ABM28922.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
Length = 879
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 252/822 (30%), Positives = 397/822 (48%), Gaps = 146/822 (17%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL+++ GH V+SS +VP D S+ F N+GM QFK +FLG Y R
Sbjct: 2 ITANEIRRRFLEFY-KAHGHEAVRSSSLVPKDDPSLLFTNAGMVQFKKIFLGQEKRAYSR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
SQKC+RVGGKHNDL GR + HHTFFEMLGN+SF DY+K DA + A +FLT+ +
Sbjct: 61 ATTSQKCLRVGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKEDAIKFAWKFLTEE-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELG-VPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RLY T F D+E +WL+ +P + I + G K NFW MG TGPCG
Sbjct: 120 LPKERLYATVF--------RDDDEAEQLWLKHSDIPAERIYRMGEKDNFWSMGDTGPCGP 171
Query: 191 SSEIHYDMKGE-----PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI D +GE P + + + DR +EIWN+VF+ + + + PL K IDT
Sbjct: 172 CSEILID-QGEHMTCGPDCGIGKCDCDR--FLEIWNLVFMQYDQDATGKREPLPKPSIDT 228
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTD--LDTSYRML 303
G+G ER+ + Q S +DTD+F +++ ++ S R+D DT+ R++
Sbjct: 229 GMGLERITAVCQGVFSNFDTDIFQAIIQYTCGLA---------NVSYRSDDETDTALRVI 279
Query: 304 SDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVKELSYN 355
+D+SR I + D + P + LR ++R A L+ D F + + +
Sbjct: 280 ADHSRAIAFMITDGILPSNEGRGYVLRRLIRRAYRFGRLIGLTDTF-------LHKTALK 332
Query: 356 IAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
+ +I+GD YPE++++ + + ++ EE ++FN +
Sbjct: 333 VVDIMGDDYPELRENSDFMARVVREEE------------------------DRFNRTLDK 368
Query: 416 GLVLGVKYLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
GL + L +LA + GD+AF LYDT+G +I+ ++A + ++ + F+
Sbjct: 369 GLSM----LEDELATLSASGAARVPGDIAFRLYDTFGFPLDIVNDIAEKRGFSVDEDGFK 424
Query: 474 QKLNELKERSKAK-AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
+ E KER+KA S DI + P+ ++ + ++ Y C + +V
Sbjct: 425 ALMKEQKERAKAAWKGSGEKDI---ASRFQPLLEEGMRSEF------IGYDHLCGEGRIV 475
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
+ +D+HA+ +++ + + L+ ++T Y +GGQ DIG
Sbjct: 476 AL--------MDEHAL-------AVERLAAGQKGY--LVTNRTPFYGASGGQSGDIGT-- 516
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGL----TSRVEVDARM------- 641
+AS GK+ VV + K +P L VE D +
Sbjct: 517 ---------------IASPSGKV----RVVDTIKPSPELVVHHVEAVEGDILLDQEVDLT 557
Query: 642 -----RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVA 695
R+ R HT +HLL+AALRRVL Q V D DF+ + ++ + +A
Sbjct: 558 VTEDDRVASARNHTCTHLLHAALRRVLGDHVKQAGSLVAPDRLRFDFT-HIAPMTPEELA 616
Query: 696 AVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP 755
AVE+ +N VI + ++ HM + + + GE Y D+V ++ I+D+ S E
Sbjct: 617 AVEREVNRVIMADIPLETDHMHYDDAVKRGAMALF-GEKYGDEVRVVAIADE----SVEL 671
Query: 756 CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
C GTH+ TG ++ GVR I+ LTG ++ AV
Sbjct: 672 CGGTHLRATGQAGLFLIVSESGVAAGVRRIEALTGWNAMHAV 713
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D S+ F N+GM QFK +FLG Y R SQKC+RVGGKHNDL GR + HHT
Sbjct: 29 VPKDDPSLLFTNAGMVQFKKIFLGQEKRAYSRATTSQKCLRVGGKHNDLENVGRTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A +FLT+ + LP +RLY T
Sbjct: 89 FFEMLGNFSFGDYFKEDAIKFAWKFLTE-ELKLPKERLYAT 128
>gi|46579502|ref|YP_010310.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
gi|387152872|ref|YP_005701808.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
gi|48428505|sp|P61700.1|SYA_DESVH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|46448916|gb|AAS95569.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
gi|311233316|gb|ADP86170.1| alanyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
Length = 879
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 252/822 (30%), Positives = 397/822 (48%), Gaps = 146/822 (17%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL+++ GH V+SS +VP D S+ F N+GM QFK +FLG Y R
Sbjct: 2 ITANEIRRRFLEFY-KAHGHEAVRSSSLVPKDDPSLLFTNAGMVQFKKIFLGQEKRAYSR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
SQKC+RVGGKHNDL GR + HHTFFEMLGN+SF DY+K DA + A +FLT+ +
Sbjct: 61 ATTSQKCLRVGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKEDAIKFAWKFLTEE-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELG-VPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP +RLY T F D+E +WL+ +P + I + G K NFW MG TGPCG
Sbjct: 120 LPKERLYATVF--------RDDDEAEQLWLKHSDIPAERIYRMGEKDNFWSMGDTGPCGP 171
Query: 191 SSEIHYDMKGE-----PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI D +GE P + + + DR +EIWN+VF+ + + + PL K IDT
Sbjct: 172 CSEILID-QGEHMTCGPDCGIGKCDCDR--FLEIWNLVFMQYDQDATGKREPLPKPSIDT 228
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTD--LDTSYRML 303
G+G ER+ + Q S +DTD+F +++ ++ S R+D DT+ R++
Sbjct: 229 GMGLERITAVCQGVFSNFDTDIFQAIIQYTCGLA---------NVSYRSDDETDTALRVI 279
Query: 304 SDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVKELSYN 355
+D+SR I + D + P + LR ++R A L+ D F + + +
Sbjct: 280 ADHSRAIAFMITDGILPSNEGRGYVLRRLIRRAYRFGRLIGLTDTF-------LHKTALK 332
Query: 356 IAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
+ +I+GD YPE++++ + + ++ EE ++FN +
Sbjct: 333 VVDIMGDDYPELRENSDFMARVVREEE------------------------DRFNRTLDK 368
Query: 416 GLVLGVKYLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
GL + L +LA + GD+AF LYDT+G +I+ ++A + ++ + F+
Sbjct: 369 GLSM----LEDELATLSASGAAHVPGDIAFRLYDTFGFPLDIVNDIAEKRGFSVDEDGFK 424
Query: 474 QKLNELKERSKAK-AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
+ E KER+KA S DI + P+ ++ + ++ Y C + +V
Sbjct: 425 ALMKEQKERAKAAWKGSGEKDI---ASRFQPLLEEGMRSEF------IGYDHLCGEGRIV 475
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
+ +D+HA+ +++ + + L+ ++T Y +GGQ DIG
Sbjct: 476 AL--------MDEHAL-------AVERLAAGQKGY--LVTNRTPFYGASGGQSGDIGT-- 516
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGL----TSRVEVDARM------- 641
+AS GK+ VV + K +P L VE D +
Sbjct: 517 ---------------IASPSGKV----RVVDTIKPSPELVVHHVEAVEGDILLDQEVDLT 557
Query: 642 -----RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVA 695
R+ R HT +HLL+AALRRVL Q V D DF+ + ++ + +A
Sbjct: 558 VTEDDRVASARNHTCTHLLHAALRRVLGDHVKQAGSLVAPDRLRFDFT-HIAPMTPEELA 616
Query: 696 AVEKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREP 755
AVE+ +N VI + ++ HM + + + GE Y D+V ++ I+D+ S E
Sbjct: 617 AVEREVNRVIMADIPLETDHMHYDDAVKRGAMALF-GEKYGDEVRVVAIADE----SVEL 671
Query: 756 CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
C GTH+ TG ++ GVR I+ LTG ++ AV
Sbjct: 672 CGGTHLRATGQAGLFLIVSESGVAAGVRRIEALTGWNAMHAV 713
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D S+ F N+GM QFK +FLG Y R SQKC+RVGGKHNDL GR + HHT
Sbjct: 29 VPKDDPSLLFTNAGMVQFKKIFLGQEKRAYSRATTSQKCLRVGGKHNDLENVGRTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A +FLT+ + LP +RLY T
Sbjct: 89 FFEMLGNFSFGDYFKEDAIKFAWKFLTE-ELKLPKERLYAT 128
>gi|332882439|ref|ZP_08450064.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|357046933|ref|ZP_09108548.1| alanine--tRNA ligase [Paraprevotella clara YIT 11840]
gi|332679609|gb|EGJ52581.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|355530135|gb|EHG99552.1| alanine--tRNA ligase [Paraprevotella clara YIT 11840]
Length = 871
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 250/793 (31%), Positives = 372/793 (46%), Gaps = 107/793 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR SF+ +F ++GH +V S+P+V D ++ F N+GM QFK++ LG PA R
Sbjct: 1 MTANEIRDSFVKFF-ESKGHLIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNRPATSKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E+L
Sbjct: 60 CTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIEWAWEYLVD---V 116
Query: 132 LPLDR--LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
L +D+ LY T F GS + GL D E W E +P DHI NFWEMG+TGPCG
Sbjct: 117 LKIDKSNLYATVFEGSPEEGLERDNEAASYW-EKFLPADHIINGNKHDNFWEMGATGPCG 175
Query: 190 YSSEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ E A VN D +IEIWN+VF+ + R + T+ PL IDT
Sbjct: 176 PCSEIHIDLRPEEEKAKVPGRELVNKDNPLVIEIWNLVFMQYNRKADQTLEPLPAKVIDT 235
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL ++Q K S YDTD+F P+++ I +S + YG D + R+++D
Sbjct: 236 GMGFERLCAVMQGKRSNYDTDVFQPIIKVIGDLSDCR-YGEDAKK------DVAMRVVAD 288
Query: 306 YSRMITVALADNMFP---DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I ++AD P A +R ++R A+ + K+ + K L + E +G
Sbjct: 289 HLRTIAFSIADGQLPGNAKAGYVIRRILRRAVRYAYTFLGQKEAFMYKLLPVLVQE-MGK 347
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE++ I ++ EE F LR L G++
Sbjct: 348 SYPELEAQKVLISKVMKEEEDSF--LRT--------------------------LETGIR 379
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L + +A R T I G AFTL+DTYG ++ + + + + E F ++ + K
Sbjct: 380 LLDRVMAETRAAGKTVIDGVEAFTLFDTYGFPLDLTELICRENGMAVDEETFHTEMQKQK 439
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
ER++ AA V D + +K + Y H C
Sbjct: 440 ERARNAAA--VETGDWVVVKEGETEFKGWDYTEH----------EC-------------- 473
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQEN 600
H +R+ + + + + ++ D T YA GGQ+ D GV E+
Sbjct: 474 -----HILRYRK-------VTQKKQTFYQIVLDYTPFYAEMGGQVGDRGV-----LCSEH 516
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
+EI + VH + + P VD +R HT +HLL+ ALR
Sbjct: 517 ETIEIVDTKRENNLPVH---IAKTLPEHPEADFMACVDTDLRAASEANHTCTHLLDQALR 573
Query: 661 RVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV-DRRHMRA 718
VL QK V + DFS + + ++ + + VE+ +N I + + D R M
Sbjct: 574 TVLGEHVEQKGSLVTPEYLRFDFSHF-QKVTDEQLREVERIVNAKIREDLPLQDHRDMPI 632
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ L + + GE Y D V ++ D S E C G H +TG I ++ S
Sbjct: 633 EKAKELGAIALF-GEKYGDRVRVVQFGD-----SVEFCGGCHAKSTGRIGMMKILSESSV 686
Query: 779 NHGVRSIKCLTGD 791
G+R I+ +TG+
Sbjct: 687 AAGIRRIEAITGE 699
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 59/82 (71%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK++ LG PA R +SQKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDIILGNRPATSKRCTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFL 903
LGNWSF DY+K++A A E+L
Sbjct: 92 LGNWSFGDYFKKEAIEWAWEYL 113
>gi|307254463|ref|ZP_07536300.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|307258922|ref|ZP_07540653.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
str. 56153]
gi|306862604|gb|EFM94561.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|306866946|gb|EFM98803.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
str. 56153]
Length = 874
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 264/830 (31%), Positives = 395/830 (47%), Gaps = 146/830 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR SFLD+F +++GHT+V SS +VP D ++ F N+GM QFK+VFLGL PY R
Sbjct: 3 TTSEIRQSFLDFF-HSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEM+GN+SF DY+K DA + E+LT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEG-------MKCNFWEMG 183
LP ++LY T + D+E DIW ++ GVP DHI + G NFW MG
Sbjct: 122 LPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMG 173
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IE+WNIVF+ R++ T+ L
Sbjct: 174 DTGPCGPCTEIFYDHGETFWGGLPGSP----EEDGDRYIEVWNIVFMQFNRLADGTMEKL 229
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ ++Q+ S Y+TD+F L I++V+G N +DLD
Sbjct: 230 PKPSVDTGMGLERMTAVMQHVNSNYETDIFQTL---IKEVAG---------LLNVSDLDN 277
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLV 349
S R+++D+ R + +AD + P + LR ++R A LL +++ F K +
Sbjct: 278 KSLRVVADHIRACSYLIADGVVPSNEGRGYVLRRIIRRAVRHGNLLGAKEAFFYKLVPTL 337
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
+ + E+L IQ ++ + E EQF
Sbjct: 338 ATVMGHAGEVLTQKQAHIQKTL-------------------------------KAEEEQF 366
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L LTK +SG++AF LYDTYG ++ ++ ++LT+
Sbjct: 367 ARTLERGLALLEDALTK-----VENNTLSGEVAFKLYDTYGFPLDLTADVCRERELTIDE 421
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
FE ++ +ER AKA+SN D + + + + YD + T L +
Sbjct: 422 AGFEAEMTAQRER--AKASSNFG----TDYNNVIKVEGQTDF-IGYDNLEAQATIVGLFS 474
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
N G ++D+IQ +A + I D+T YA GGQ+ D G
Sbjct: 475 N-----------------------GKAVDTIQSGESAVI--ILDQTPFYAEMGGQVGDSG 509
Query: 590 VA------YLTNTTQENGKV--EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
+ + N TQ+ G+V IG+L S G++ KVT VDA
Sbjct: 510 LISTGICNFAVNDTQKYGQVFGHIGQLTS--------GSLSIGDKVTA------TVDATR 555
Query: 642 RLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R+ H+ +HLL++ALR VL QK V + DFS E +S + +E+
Sbjct: 556 RVAITANHSATHLLHSALREVLGDHVAQKGSLVSENILRFDFS-QPEAISKSQLEEIERI 614
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I +QV M + + GE Y D V ++ +++ S E C GTH
Sbjct: 615 VNRKIRENIQVTIETMDIESAKKKGAMALF-GEKYGDVVRVVGMTE----FSIELCGGTH 669
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN-GKHLSTAASF 809
V TG I ++ + G+R ++ +T +++ + N K L +A F
Sbjct: 670 VQRTGDIGLFKLVSEGAVAAGIRRVEAVTAETAIEWLHNQQKVLQQSAEF 719
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL PY R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+K DA + E+LT P + LP ++LY T
Sbjct: 89 FFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEKLYVT 130
>gi|384097880|ref|ZP_09999000.1| alanyl-tRNA synthetase [Imtechella halotolerans K1]
gi|383836762|gb|EID76169.1| alanyl-tRNA synthetase [Imtechella halotolerans K1]
Length = 870
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 256/805 (31%), Positives = 379/805 (47%), Gaps = 125/805 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR++FL +F + Q H +V S+PIV D ++ F NSGM QFK FLG R
Sbjct: 1 MNSQEIRTAFLRFFESKQ-HIIVPSAPIVLKDDPTLMFNNSGMAQFKEYFLGNATPKSNR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A EFLT +
Sbjct: 60 IADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEAIAWAWEFLTD-VLK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY + F GS + + D+E D+W + V D I K K NFWEMG GPCG
Sbjct: 119 LDKDRLYVSVFEGSPEENVSFDQEAWDLWKQF-VSEDRIIKGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ E P L VNAD ++EIWN+VF+ R + ++ L ++DT
Sbjct: 178 SEIHIDLRSEVDREKVPGYGL--VNADHPQVVEIWNLVFMEFNRKADGSLEKLPAQHVDT 235
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL +Q K S YDTD+F PL+ +E ++ K YG + ++D+ + R++ D
Sbjct: 236 GMGFERLCMAMQGKVSNYDTDVFTPLIREVETITNVK-YG----ANEKSDI--AIRVIVD 288
Query: 306 YSRMITVALADNMFPDATAK--LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+ R + A+AD P T + + + F ++ + +L ++ +GD
Sbjct: 289 HVRAVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLDRKEPFIYKLVEVLSGQMGDF 348
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PEI+ N + ++ EE F LR L+Q GLV
Sbjct: 349 FPEIKTQQNLVTQVIREEEASF--LRT---------------LDQ-------GLV----- 379
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + S E+SG AF LYDT+G ++ + K +L FE++L + K+RS
Sbjct: 380 LLDSVIASTSGKEVSGKRAFELYDTFGFPIDLTALILREKGYSLNESEFEEELQKQKDRS 439
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+A + D +++ YD + + + + T V I
Sbjct: 440 RAASKVTTGDWEIL-----------------YDDDVEEFVGYDMTTTKVKIT-------- 474
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--------VAYLTN 595
+ + + G L+F+ T Y GGQI D G V Y+ +
Sbjct: 475 RYRKVENKKFGEMYQ-----------LVFNITPFYPEGGGQIGDRGFIEASNGEVVYIED 523
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T +EN I+HF + + GL + V V + R H+ +HLL
Sbjct: 524 TKKEN------------NVIIHFTKTLP--RNLDGLFTAV-VSSEFRKNVSSNHSATHLL 568
Query: 656 NAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ-VDR 713
+ ALR VL T QK V + DFS + + + + VE ++N I + V+R
Sbjct: 569 HQALRAVLGTHVEQKGSLVSNSYLRFDFSHFAKVTETE-LKQVEDFVNARIQEALPLVER 627
Query: 714 RHMRASELPFLTHL----TVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIES 769
R+ +PF L + GE Y D V I S E C G HV NT I
Sbjct: 628 RN-----IPFQQALDEGAMALFGEKYGDTVRAIKFGK-----SMELCGGIHVENTKDIWH 677
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSSK 794
+ + GVR I+ +T + +K
Sbjct: 678 FMITSESAVAAGVRRIEAITNEFAK 702
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK FLG R+A++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFNNSGMAQFKEYFLGNATPKSNRIADTQKCLRVSGKHNDLEDVGFDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A EFLT + L DRLY +
Sbjct: 92 LGNWSFGDYFKKEAIAWAWEFLTD-VLKLDKDRLYVS 127
>gi|227822193|ref|YP_002826164.1| alanyl-tRNA synthetase [Sinorhizobium fredii NGR234]
gi|227341193|gb|ACP25411.1| alanyl-tRNA synthetase [Sinorhizobium fredii NGR234]
Length = 887
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 253/797 (31%), Positives = 367/797 (46%), Gaps = 106/797 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS FLDYF GH +V SSP+VP D ++ F N+GM QFKNVF GL PY A +Q
Sbjct: 7 IRSMFLDYF-RKNGHDIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEQRPYSTAATAQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K A +A +TK L R
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKERAIELAWNLITKE-YGLDAKR 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
L T + D+E +W ++ G D I + NFW MG TGPCG SEI
Sbjct: 125 LLVTVY--------HTDDEAFGLWKKIAGFSDDRIIRIPTSDNFWAMGDTGPCGPCSEIF 176
Query: 196 YD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
YD G P SA + D + IEIWN+VF+ +++++ + V L + IDTG+G E
Sbjct: 177 YDHGEQIWGGPPGSA----DEDGDRFIEIWNLVFMQYEQITKEERVNLPRPSIDTGMGLE 232
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RL +LQ + YD DLF L+ E+ +G K G D S+R+++D+ R
Sbjct: 233 RLAAVLQGQHDNYDIDLFRALIAASEEATGVKAEG---------DRRASHRVIADHLRSS 283
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+AD + P + LR ++R A+ A++LG P +
Sbjct: 284 AFLIADGVLPSNEGRGYVLRRIMRRAM--------------------RHAQLLGAQEPLM 323
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ ++G+ R + L +A + L+ +LE+ + L G+ L
Sbjct: 324 W---KLLPALVGQMGRAYPELVRA-----EALISETLKLEETRFRKT--LERGLSLLADA 373
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
A + G+ AF LYDTYG ++ Q+ K +T+ +AF + K ++A
Sbjct: 374 SAGLSEGDQFDGETAFKLYDTYGFPLDLTQDALRTKGITVDTDAFSTAMQRQKAEARANW 433
Query: 488 ASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
A + + F + + D+ YDT S G++ Q D
Sbjct: 434 AGSGEAA--TETIWFELKEKHGATDFLGYDTESAE-----------GVI---QAIVRDGA 477
Query: 547 AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIG 606
+ A G S+ LI ++T Y +GGQ+ D GV E GKV +
Sbjct: 478 VVESASKGESVQ-----------LILNQTPFYGESGGQMGDTGV-----IATETGKVAVT 521
Query: 607 ELASL-EGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-T 664
+ EG VH+G V V G + + VD RL H+ +HLL+ ALR VL T
Sbjct: 522 DTQKRGEGLFVHYGTVTEGI-VKTGEAAALTVDHARRLRLRANHSATHLLHEALREVLGT 580
Query: 665 CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFL 724
QK V + D S + + +S + + VE+ N+VI V R M +
Sbjct: 581 HVAQKGSLVAPERLRFDVS-HPKPMSAEELRIVEEMANEVIVQNTPVTTRLMSVDD-AIA 638
Query: 725 THLTVIPGEIYPDDVILIDI------SDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ GE Y D+V ++ + S S E C GTHV TG I V+ +
Sbjct: 639 EGAMALFGEKYGDEVRVVSMGQGIRGSKAGRPYSVELCGGTHVSATGDIGLVRVVSESAV 698
Query: 779 NHGVRSIKCLTGDSSKA 795
GVR ++ LTG++++A
Sbjct: 699 GAGVRRLEALTGEAARA 715
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFKNVF GL PY A +QKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFTNAGMVQFKNVFTGLEQRPYSTAATAQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K A +A +TK L RL T
Sbjct: 89 FFEMLGNFSFGDYFKERAIELAWNLITK-EYGLDAKRLLVT 128
>gi|307245509|ref|ZP_07527596.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|306853568|gb|EFM85786.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
Length = 874
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 264/830 (31%), Positives = 395/830 (47%), Gaps = 146/830 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR SFLD+F +++GHT+V SS +VP D ++ F N+GM QFK+VFLGL PY R
Sbjct: 3 TTSEIRQSFLDFF-HSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEM+GN+SF DY+K DA + E+LT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEG-------MKCNFWEMG 183
LP ++LY T + D+E DIW ++ GVP DHI + G NFW MG
Sbjct: 122 LPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMG 173
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IE+WNIVF+ R++ T+ L
Sbjct: 174 DTGPCGPCTEIFYDHGETFWGGLPGSP----EEDGDRYIEVWNIVFMQFNRLADGTMEKL 229
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ ++Q+ S Y+TD+F L I++V+G N +DLD
Sbjct: 230 PKPSVDTGMGLERMTAVMQHVNSNYETDIFQTL---IKEVAG---------LLNVSDLDN 277
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLV 349
S R+++D+ R + +AD + P + LR ++R A LL +++ F K +
Sbjct: 278 KSLRVVADHIRACSYLIADGVVPSNEGRGYVLRRIIRRAVRHGNLLGAKEAFFYKLVPTL 337
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
+ + E+L IQ ++ + E EQF
Sbjct: 338 ATVMGHAGEVLTQKQAHIQKTL-------------------------------KAEEEQF 366
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L LTK +SG++AF LYDTYG ++ ++ ++LT+
Sbjct: 367 ARTLERGLALLEDALTK-----VENNTLSGEVAFKLYDTYGFPLDLTADVCRERELTIDK 421
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
FE ++ +ER AKA+SN D + + + + YD + T L +
Sbjct: 422 AGFEAEMTAQRER--AKASSNFG----TDYNNVIKVEGQTDF-IGYDNLEAQATIVGLFS 474
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
N G ++D+IQ +A + I D+T YA GGQ+ D G
Sbjct: 475 N-----------------------GKAVDTIQSGESAVI--ILDQTPFYAEMGGQVGDSG 509
Query: 590 VA------YLTNTTQENGKV--EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
+ + N TQ+ G+V IG+L S G++ KVT VDA
Sbjct: 510 LISTGICNFAVNDTQKYGQVFGHIGQLTS--------GSLSIGDKVTA------TVDATR 555
Query: 642 RLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R+ H+ +HLL++ALR VL QK V + DFS E +S + +E+
Sbjct: 556 RVAITANHSATHLLHSALREVLGDHVAQKGSLVSENILRFDFS-QPEAISKSQLEEIERI 614
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I +QV M + + GE Y D V ++ +++ S E C GTH
Sbjct: 615 VNRKIRENIQVTIETMDIESAKKKGAMALF-GEKYGDVVRVVGMTE----FSIELCGGTH 669
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN-GKHLSTAASF 809
V TG I ++ + G+R ++ +T +++ + N K L +A F
Sbjct: 670 VQRTGDIGLFKLVSEGAVAAGIRRVEAVTAETAIEWLHNQQKVLQQSAEF 719
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL PY R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+K DA + E+LT P + LP ++LY T
Sbjct: 89 FFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEKLYVT 130
>gi|345888349|ref|ZP_08839443.1| alanyl-tRNA synthetase [Bilophila sp. 4_1_30]
gi|345040801|gb|EGW45026.1| alanyl-tRNA synthetase [Bilophila sp. 4_1_30]
Length = 884
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 242/796 (30%), Positives = 385/796 (48%), Gaps = 104/796 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR FL+YF GHT V SS ++P D S+ F N+GM QFK +F G Y R
Sbjct: 2 LTANEIRHRFLEYF-KKHGHTEVASSSLIPRDDPSLLFTNAGMVQFKKIFCGQEKRDYVR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
SQKC+RVGGKHNDL GR + HHTFFEMLGN+SF DY+K DA R A F+T+ +
Sbjct: 61 ATTSQKCLRVGGKHNDLDNVGRTARHHTFFEMLGNFSFGDYFKEDAIRFAWTFITED-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP DRLY T + D+E ++W ++ GV + I + G K NFW MG TGPCG
Sbjct: 120 LPKDRLYITVY--------KDDDEAFELWQKVAGVAPERIFRLGEKDNFWSMGDTGPCGP 171
Query: 191 SSEIHYD----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH+D M P + + + DR +EIWN+VF+ ++++ + VPL + IDTG
Sbjct: 172 CSEIHFDQGADMACGPDCGIGKCDCDR--FLEIWNLVFMQFEQLADGSRVPLPRPSIDTG 229
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ER+ + Q S YDTDLF + + +++G + + D DT+ R+++D+
Sbjct: 230 MGLERIAGVCQGVRSNYDTDLFQIFINYMAELAGVR-------YRDNADNDTALRVIADH 282
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
SR I +AD + P + LR ++R A Q + + + + E++G+
Sbjct: 283 SRAIAFMIADGILPSNEGRGYVLRRLIRRAFRFGR--LMGMQEPFLYKTTLKVVEVMGED 340
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
YPE++ + + + T+ E E+F+ + GL + +
Sbjct: 341 YPELRARADFMARV------------------------TREEEERFSSTLDKGLAMLEEE 376
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
+ + I I G+ AF LYDTYG +I+ ++A + F + +++ K+R+
Sbjct: 377 MNALADKGEKI--IPGETAFKLYDTYGFPLDIVNDVAEKRGFKADEAGFNEYMHQQKQRA 434
Query: 484 KAK-AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
+A S DI + + +D K ++ + + T L G +G V
Sbjct: 435 RAAWKGSGEKDI---ASRFQSLLEDGLKSEF--------FGY----TALTG--VGRVVAL 477
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV-------AYLTN 595
+D G ++++ +V + D+T Y +GGQ D G+ A + +
Sbjct: 478 LDD-------DGLPVEALPSGSLGYV--VTDQTPFYGASGGQCGDTGLLTAPAGSAKVLD 528
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T + + + + + V G ++S +V +T + +DA R HT +HLL
Sbjct: 529 TLKPSADLTVHHIE------VDGGTLLSDQEVVLTVTESIRLDA------ARNHTCTHLL 576
Query: 656 NAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
+AALRRVL Q V D DFS + ++ + +AAVE+ +N I + +
Sbjct: 577 HAALRRVLGDHVRQAGSLVTPDRLRFDFS-HIAPMTPEELAAVERDVNAAIMADYPLTAK 635
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
M + + + GE Y D V ++ I + ++ S E C GTH+ +TG S ++
Sbjct: 636 LMGQQAAIDMGAMALF-GEKYGDTVRVVTIGNPDHTESVELCGGTHLHSTGQAGSFVILS 694
Query: 775 YKSYNHGVRSIKCLTG 790
G R I+ TG
Sbjct: 695 ESGIAAGTRRIEAATG 710
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 74/118 (62%), Gaps = 6/118 (5%)
Query: 801 KHLSTAASFSQILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVG 860
KH T + S + IP D S+ F N+GM QFK +F G Y R SQKC+RVG
Sbjct: 17 KHGHTEVASSSL-----IPRDDPSLLFTNAGMVQFKKIFCGQEKRDYVRATTSQKCLRVG 71
Query: 861 GKHNDLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
GKHNDL GR + HHTFFEMLGN+SF DY+K DA R A F+T+ + LP DRLY T
Sbjct: 72 GKHNDLDNVGRTARHHTFFEMLGNFSFGDYFKEDAIRFAWTFITE-DLKLPKDRLYIT 128
>gi|78357417|ref|YP_388866.1| alanyl-tRNA synthetase [Desulfovibrio alaskensis G20]
gi|123552081|sp|Q30YS5.1|SYA_DESDG RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|78219822|gb|ABB39171.1| alanyl-tRNA synthetase [Desulfovibrio alaskensis G20]
Length = 880
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 237/789 (30%), Positives = 373/789 (47%), Gaps = 93/789 (11%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL++F GH +V SS +VP D ++ F N+GM QFK +FLG Y R
Sbjct: 2 ITANEIRHRFLEFF-RKNGHEVVDSSSLVPNDDPTLLFTNAGMVQFKKIFLGQEKRAYSR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
SQKC+RVGGKHNDL GR + HHTFFEMLGN+SF DY+K DA R A F+T+ +
Sbjct: 61 ATTSQKCLRVGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKEDAIRFAWSFITE-ELK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++LY T + D+E +W + GVP + I + G K NFW MG TGPCG
Sbjct: 120 LPKEKLYITIY--------RDDDEAEKLWQSVAGVPSERIYRLGEKDNFWSMGDTGPCGP 171
Query: 191 SSEIHY----DMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH DM P + + + DR +EIWN+VF+ + + T PL IDTG
Sbjct: 172 CSEIHIDQGADMACGPDCGIGKCDCDR--FLEIWNLVFMQYDQAPDGTRTPLPNPCIDTG 229
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ER+ + QN S +D DLF + +++G + D DT+ R+++D+
Sbjct: 230 MGLERIAAVCQNVRSNFDCDLFQAFINYTAELAGVS------YRKDSEDTDTALRVIADH 283
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
SR I +AD + P + LR ++R A + +G + + + + E +G
Sbjct: 284 SRAIAFMIADGILPSNEGRGYVLRRLIRRAYRFGRLIG--LEGSYLYKTALKVVEEMGGA 341
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PE+ ++ + + ++ EE E+FN + GL+L
Sbjct: 342 FPELLENKDFMARVVREEE------------------------ERFNKTLDKGLLLLEDE 377
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L+ AR+ T ++GD+AF LYDT+G +I+ ++A + ++ + F++ + E K R+
Sbjct: 378 LSALTARNS--TCVAGDVAFKLYDTFGFPLDIVNDIAEKRGFSVDEDGFKKLMQEQKSRA 435
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
KA T + R+ L+ + +G
Sbjct: 436 KAAWKGG-----------------------GEQTLAARFQ-ALLEEGIASEFVGYDHLSA 471
Query: 544 DKHAIRHARSGASIDSIQ-LEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
+ I A G ++S++ L A L+ +T Y +GGQ+ D G + E G
Sbjct: 472 ESRII--ALLGEDMESVEALPAGAAGYLVSTRTPFYGESGGQLGDTG-----DAVSETGS 524
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
E+ + K++ VS ++ + V R R HT +H+L+AALR+V
Sbjct: 525 AEVTDTLKPSAKLLVHVVKVSQGELLRDQAVTLTVREGQRFASARNHTCTHILHAALRKV 584
Query: 663 LT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L Q V + DF+ + ++ + + AVE +N VI + + ++ HM A +
Sbjct: 585 LGDHVKQAGSLVGPERLRFDFT-HISAMTPEEILAVENEVNRVILSDIALNSEHM-AYDD 642
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
+ GE Y +V ++ I + S E C GTH+ TG S + G
Sbjct: 643 AVQKGAMALFGEKYESEVRVVSIPGE----SVELCGGTHLRATGQAGSFYITSESGVAAG 698
Query: 782 VRSIKCLTG 790
VR I+ +TG
Sbjct: 699 VRRIEAVTG 707
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK +FLG Y R SQKC+RVGGKHNDL GR + HHT
Sbjct: 29 VPNDDPTLLFTNAGMVQFKKIFLGQEKRAYSRATTSQKCLRVGGKHNDLENVGRTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K DA R A F+T+ + LP ++LY T
Sbjct: 89 FFEMLGNFSFGDYFKEDAIRFAWSFITE-ELKLPKEKLYITI 129
>gi|317484483|ref|ZP_07943393.1| tRNA synthetase class II [Bilophila wadsworthia 3_1_6]
gi|316924259|gb|EFV45435.1| tRNA synthetase class II [Bilophila wadsworthia 3_1_6]
Length = 884
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 241/796 (30%), Positives = 383/796 (48%), Gaps = 104/796 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
L + IR FL+YF GHT V SS ++P D S+ F N+GM QFK +F G Y R
Sbjct: 2 LTANEIRHRFLEYF-KKHGHTEVASSSLIPRDDPSLLFTNAGMVQFKKIFCGQEKRDYVR 60
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
SQKC+RVGGKHNDL GR + HHTFFEMLGN+SF DY+K DA R A F+T+ +
Sbjct: 61 ATTSQKCLRVGGKHNDLDNVGRTARHHTFFEMLGNFSFGDYFKEDAIRFAWTFITED-LK 119
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP DRLY T + D+E ++W ++ GV + I + G K NFW MG TGPCG
Sbjct: 120 LPKDRLYITVY--------KDDDEAFELWQKVAGVAPERIFRLGEKDNFWSMGDTGPCGP 171
Query: 191 SSEIHYD----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH+D M P + + + DR +EIWN+VF+ ++++ + VPL + IDTG
Sbjct: 172 CSEIHFDQGADMACGPDCGIGKCDCDR--FLEIWNLVFMQFEQLADGSRVPLPRPSIDTG 229
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ER+ + Q S YDTDLF + + +++G + + D DT+ R+++D+
Sbjct: 230 MGLERIAGVCQGVRSNYDTDLFQVFINYMAELAGVR-------YRDNADNDTALRVIADH 282
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
SR I +AD + P + LR ++R A Q + + + + E++G+
Sbjct: 283 SRAIAFMIADGILPSNEGRGYVLRRLIRRAFRFGR--LMGMQEPFLYKTALKVVEVMGED 340
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
YPE++ + + + T+ E E+F+ + GL + +
Sbjct: 341 YPELRARADFMARV------------------------TREEEERFSSTLDKGLSMLEEE 376
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
+ + I I G+ AF LYDTYG +I+ ++A + F + +++ K+R+
Sbjct: 377 MDALADKGEKI--IPGETAFKLYDTYGFPLDIVNDVAEKRGFKADEAGFNEYMHQQKQRA 434
Query: 484 KAK-AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
+A S DI + + +D K ++ YT +V ++ GD
Sbjct: 435 RAAWKGSGEKDI---ASRFQGLLEDGLKSEFF------GYTALTGVGRVVALLDGD---- 481
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV-------AYLTN 595
G ++++ +V + D+T Y +GGQ D G+ A + +
Sbjct: 482 -----------GLPVEALPSGSLGYV--VTDQTPFYGASGGQCGDTGLLTAPAGSAKVLD 528
Query: 596 TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLL 655
T + + + + + V G ++S +V +T + +DA R HT +HLL
Sbjct: 529 TLKPSADLTVHHIE------VDGGTLLSDQEVVLTVTESIRLDA------ARNHTCTHLL 576
Query: 656 NAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRR 714
+AALRRVL Q V D DFS + ++ + +AAVE+ +N I + +
Sbjct: 577 HAALRRVLGDHVRQAGSLVTPDRLRFDFS-HIAPMTPEELAAVERDVNAAIMADYPLTAK 635
Query: 715 HMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIG 774
M + + + GE Y D V ++ I + ++ S E C GTH+ +TG S ++
Sbjct: 636 LMGQQAAIDMGAMALF-GEKYGDTVRVVTIGNPDHTESVELCGGTHLHSTGQAGSFVILS 694
Query: 775 YKSYNHGVRSIKCLTG 790
G R I+ TG
Sbjct: 695 ESGIAAGTRRIEAATG 710
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 74/118 (62%), Gaps = 6/118 (5%)
Query: 801 KHLSTAASFSQILNVGNIPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVG 860
KH T + S + IP D S+ F N+GM QFK +F G Y R SQKC+RVG
Sbjct: 17 KHGHTEVASSSL-----IPRDDPSLLFTNAGMVQFKKIFCGQEKRDYVRATTSQKCLRVG 71
Query: 861 GKHNDLSFAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
GKHNDL GR + HHTFFEMLGN+SF DY+K DA R A F+T+ + LP DRLY T
Sbjct: 72 GKHNDLDNVGRTARHHTFFEMLGNFSFGDYFKEDAIRFAWTFITE-DLKLPKDRLYIT 128
>gi|392374391|ref|YP_003206224.1| alanyl-tRNA synthetase [Candidatus Methylomirabilis oxyfera]
gi|258592084|emb|CBE68389.1| alanyl-tRNA synthetase [Candidatus Methylomirabilis oxyfera]
Length = 886
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 261/807 (32%), Positives = 382/807 (47%), Gaps = 127/807 (15%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP 70
RL IR FL +F GHT+V SS +VP GD ++ F N+GM FK VFLG P PY
Sbjct: 4 RLTGGEIRERFLRFF-ERNGHTVVASSSLVPAGDPTLLFTNAGMVPFKGVFLGTDPRPYR 62
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R + QKC+RV GKHNDL GR + HHTFFEMLGN+SF DY+K A FLT +
Sbjct: 63 RAVSIQKCLRVSGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKEGAIEYGWAFLT-CEL 121
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCG 189
LP DRL+ T + D G ++W L G+P D I + G K NFW MG TGPCG
Sbjct: 122 ELPADRLWATIYKDDDAAG--------ELWQRLTGLPSDRIVRLGEKDNFWSMGETGPCG 173
Query: 190 YSSEIHYDMK-----GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
SE+ +D G P+ + DR +E+WN+VF+ R ++ T+ PL K ID
Sbjct: 174 PCSELIFDQGPTIGCGRPTCTI-ECGCDR--YLELWNLVFMQFNRDASGTLTPLPKPSID 230
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
TG G ER+ + Q TS +++DL PL+ T+E++S K YG ++ D D S R+++
Sbjct: 231 TGAGLERMAAVCQGVTSNFESDLIRPLIATVEELS-QKRYG-----ADEKD-DISMRVIA 283
Query: 305 DYSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKL-------VKELSYNIA 357
D++R +T ALAD + P N R +L ++ G+L + ++ +
Sbjct: 284 DHARAVTFALADGVLPS------NEGRGYVLRRILRRALRHGRLLGLDEPFLASTTHRVI 337
Query: 358 EILGDVYPEIQDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
+++ D YPE+ S ++ L EE R LR+A P L
Sbjct: 338 DLMTDAYPELPASRAHVERLAWIEEDRFGIVLREAL-----------PRLHD-------- 378
Query: 417 LVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKL 476
L+ +K T + A P G F LYDTYG+ +++I E+A + + FE +L
Sbjct: 379 LIEKIKSQTAEQAILP------GSKLFELYDTYGVPRDLIDEIAVEQSVGCDWNGFEIEL 432
Query: 477 NELKERSKA--KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPC-----LDT 529
+E S+A KA +V + +H ++R F L+
Sbjct: 433 RHQRETSRAHLKAFGDVQGV---------------AEAFHDLVKTRRTVFLGYERLDLEA 477
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
++V +++G G +D + + V + D+T YA +GGQ+ D G
Sbjct: 478 SVVAVIVG----------------GTQVDRMGVGQEGEV--VLDQTPFYAESGGQVGDAG 519
Query: 590 VAYLTNTTQENGKVEIGELAS----LEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLG 644
YL G + E+ L G IVH V F+ L + VE D R
Sbjct: 520 --YL------RGDGVLAEVLDTKRPLAGLIVHRVRVKRGEFRSGQRLLASVEADRRST-- 569
Query: 645 CMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIND 703
++ HT +HL++AALR++L Q+ V D DF YG +S + +E+ +N
Sbjct: 570 TVKNHTATHLVHAALRQILGDHVRQEGSLVAPDRLRFDFRHYG-PVSPAEITQIEEMVNA 628
Query: 704 VIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFN 763
+ V V MR E L G+ Y D+V ++ ++D S E C GTH +
Sbjct: 629 KLWANVPVVVEEMRLDEALAKGALAFF-GDKYGDEVRVVGVAD----FSIELCGGTHTKS 683
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTG 790
TG I + G+R I+ LTG
Sbjct: 684 TGEIGLLKIAHETGVAAGIRRIEALTG 710
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P GD ++ F N+GM FK VFLG P PY R + QKC+RV GKHNDL GR + HHT
Sbjct: 32 VPAGDPTLLFTNAGMVPFKGVFLGTDPRPYRRAVSIQKCLRVSGKHNDLENVGRTARHHT 91
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K A FLT + LP DRL+ T
Sbjct: 92 FFEMLGNFSFGDYFKEGAIEYGWAFLT-CELELPADRLWATI 132
>gi|424869558|ref|ZP_18293255.1| Alanyl-tRNA synthetase [Leptospirillum sp. Group II 'C75']
gi|124514184|gb|EAY55699.1| Alanyl-tRNA synthetase [Leptospirillum rubarum]
gi|387220609|gb|EIJ75268.1| Alanyl-tRNA synthetase [Leptospirillum sp. Group II 'C75']
Length = 891
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 257/790 (32%), Positives = 380/790 (48%), Gaps = 104/790 (13%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
S +R FL YF N GH +V S+ ++P GD ++ F N+GM FK++FLG R
Sbjct: 3 SWELRQKFLLYF-NGSGHDVVPSASLIPAGDPTLLFTNAGMVPFKDIFLGAEKTTRKRAV 61
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
+ QKCVR GGKHNDL G HHTFFEM+GN+SF DY+K++A A FLTK L
Sbjct: 62 SIQKCVRAGGKHNDLDRVGFTRRHHTFFEMMGNFSFGDYFKKEAISFAWTFLTK---ELG 118
Query: 134 LDR--LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+DR L+ T + D+E +W E+ V D I + G K NFW+MG TGPCG
Sbjct: 119 MDRRLLWVTVY--------REDDEAERLWREVTDVLPDRIVRLGEKDNFWQMGDTGPCGP 170
Query: 191 SSEIHYDMKGEP---SSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEI D +GE S +V D + +EIWN+VF+ + R + + PL + IDTG+
Sbjct: 171 CSEILVD-QGERFSCGSPDCKVGCDCDRFLEIWNLVFMQYDRNAEGVLSPLPRPSIDTGM 229
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ERL ++Q K S Y+TDLF+PL+ TIE Y R + LD +YR+++D+
Sbjct: 230 GLERLSAVVQKKDSNYETDLFMPLIRTIET------YSRVHYGAGEGSLDHAYRVIADHL 283
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R L + + P + LR ++R ALL ++ ++ L+ ++AE++ Y
Sbjct: 284 RSSVFLLHEGIAPSNEGRGHVLRRIIRRALLFGRELGLPH--PILPSLAESVAEMMAKPY 341
Query: 365 PEIQDSINKIQLILG-EESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
PE++ S+++IQ +L EE R L PLV+ E +E+
Sbjct: 342 PELRTSLSRIQDVLRLEEGRFHQTLESGL-----PLVQ-----EMLRTLEK--------- 382
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
KQ P G+M F L+DT+G +I+++ A + + L ++ FE+K+ E +ER
Sbjct: 383 --KQEKVFP------GEMLFLLHDTHGFPLDIVEDAAKMQGILLDYKGFEEKMEEQRERG 434
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
++ D FP+ DK K + K T++ G V+ F +
Sbjct: 435 RSSWTGKKED--------FPLPSDKLKKSVEFQGYEK--------TSMQGTVL----FLL 474
Query: 544 D-KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
+ K ++ +G S V ++ DKT Y V + + G
Sbjct: 475 NGKEEVKEVHAGES-----------VLVVLDKTVFYPEG-----GGQVGDVGDLIGPFGY 518
Query: 603 VEI-GELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+ + G G IV G VVS KV+ G T VD R G R HT +HLL+AALR
Sbjct: 519 IRVRGAKKPYPGWIVLSGEVVSG-KVSVGETIDQHVDEEARQGSERHHTATHLLHAALRT 577
Query: 662 VL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL Q V + DF+ + +S +++ AVE +N I VD M S+
Sbjct: 578 VLGEQVRQAGSLVAPERLRFDFTCP-QPVSPENLLAVEALVNGWIFRNSPVDASEMEKSK 636
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+ L E Y D V ++ + S E C GTHV +TG I S ++
Sbjct: 637 ALDMGALAFFD-EKYGDRVRVVQVPG----TSVELCGGTHVRSTGQIGSLLILQETGVAA 691
Query: 781 GVRSIKCLTG 790
G+R I+ + G
Sbjct: 692 GIRRIEAVAG 701
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP GD ++ F N+GM FK++FLG R + QKC+R GGKHNDL G HHT
Sbjct: 28 IPAGDPTLLFTNAGMVPFKDIFLGAEKTTRKRAVSIQKCVRAGGKHNDLDRVGFTRRHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 914
FFEM+GN+SF DY+K++A A FLTK L +DR
Sbjct: 88 FFEMMGNFSFGDYFKKEAISFAWTFLTK---ELGMDR 121
>gi|187924800|ref|YP_001896442.1| alanyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
gi|205830007|sp|B2SZN0.1|SYA_BURPP RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|187715994|gb|ACD17218.1| alanyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
Length = 874
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 250/811 (30%), Positives = 390/811 (48%), Gaps = 138/811 (17%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG PY R
Sbjct: 1 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAESRPYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HHTFFEMLGN+SF DY+KRDA A E LT
Sbjct: 60 ATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLT-GVYQ 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP D+L+ T + D+E DIW E+GVP + I + G NFW+M
Sbjct: 119 LPKDKLWVTVY--------HEDDEAHDIWAKEVGVPVERIIRIGDNKGARYASDNFWQMA 170
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
GPCG SEI YD G P S D + IEIWN+VF+ R + + PL
Sbjct: 171 DVGPCGPCSEIFYDHGPDVWGGPPGSP----EEDGDRYIEIWNLVFMQFSRDAQGNMTPL 226
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S Y+ DLF L+ K GR S+ T+
Sbjct: 227 PKQCVDTGMGLERIAAVLQHVHSNYEIDLFQALI---------KAAGRETGVSDLTN--N 275
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELSY 354
S ++++D+ R + + D + P + LR +VR A+ +K+ K+G +
Sbjct: 276 SLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAI---RHGYKLGKKGSFFHRMVA 332
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
++ +GD YPE++++ E R+ D LR+ E E+F E
Sbjct: 333 DLVAQMGDAYPELKEA----------EQRVTDVLRQ--------------EEERFFETIE 368
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
G+ + L A+ + G++AF L+DTYG ++ ++ +++T+ AF++
Sbjct: 369 HGMSILESALADLEAKGGKT--LDGELAFKLHDTYGFPLDLTADVCREREVTVDEAAFDE 426
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ ++R +A+AA K+K + + + TF
Sbjct: 427 AM--ARQREQARAAG------------------KFKMAQGLEYSGAKTTFHGY------- 459
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV---A 591
+++ D I GAS+ ++ A V + D T YA +GGQ+ D GV A
Sbjct: 460 ---EEIVFDDAKVIALYVDGASVKEVRDGRQAVV--VLDHTPFYAESGGQVGDQGVLANA 514
Query: 592 YLTNTTQENGKVE---IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA 648
+ + KV+ +G +LE + G+VV + E+DA R R
Sbjct: 515 SVRFAVSDTLKVQADVVGHHGTLEQGTLKVGDVV-----------KAEIDAVRRARTARN 563
Query: 649 HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIA 706
H+ +HL++ ALR VL + QK V +D+ DF+ + ++ + + VE+ +N +V+A
Sbjct: 564 HSATHLMHKALREVLGSHVQQKGSLVDADKTRFDFA-HNAPMTDEQIRRVEEIVNAEVLA 622
Query: 707 NQVQVDRRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVF 762
N + R +PF + + GE Y D+V ++D+ SRE C GTHV
Sbjct: 623 NAPGIVRV------MPFDEAVKGGAMALFGEKYGDEVRVLDLG-----FSRELCGGTHVH 671
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I ++ G+R ++ +TGD++
Sbjct: 672 RTGDIGLFKIVMEGGVAAGIRRVEAITGDNA 702
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG PY R +Q+ +R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLLFTNSGMVQFKDVFLGAESRPYSRATTAQRSVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA A E LT LP D+L+ T
Sbjct: 88 FFEMLGNFSFGDYFKRDAIHYAWELLT-GVYQLPKDKLWVT 127
>gi|307730458|ref|YP_003907682.1| alanyl-tRNA synthetase [Burkholderia sp. CCGE1003]
gi|307584993|gb|ADN58391.1| alanyl-tRNA synthetase [Burkholderia sp. CCGE1003]
Length = 890
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 245/814 (30%), Positives = 392/814 (48%), Gaps = 144/814 (17%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG PY R
Sbjct: 17 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAESRPYSR 75
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HHTFFEMLGN+SF DY+KRDA A E LT
Sbjct: 76 ATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTG-VYQ 134
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP ++L+ T + D+E DIW E+GVP + I + G NFW+M
Sbjct: 135 LPKEKLWVTVY--------HEDDEAHDIWAKEVGVPVERIIRIGDNKGARYASDNFWQMA 186
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG SEI YD G P S D + IEIWN+VF+ R + + PL
Sbjct: 187 DTGPCGPCSEIFYDHGPDVWGGPPGSP----EEDGDRYIEIWNLVFMQFNRDAQGNMTPL 242
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S Y+ DLF L++ + +G +DL +
Sbjct: 243 PKQCVDTGMGLERIAAVLQHVHSNYEIDLFQALIKAAARETGV------------SDLAN 290
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELS 353
S ++++D+ R + + D + P + LR +VR A+ +K+ K+G +
Sbjct: 291 NSLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAI---RHGYKLGKKGSFFHRMV 347
Query: 354 YNIAEILGDVYPEIQDSINKIQLIL-GEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIM 412
++ E +G YPE++D+ ++ +L EE R F+ + +I+
Sbjct: 348 ADLVEQMGSAYPELKDAQARVTDVLRQEEERFFETIEHG-----------------MSIL 390
Query: 413 EEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF 472
E + L K+ AR + G++AF L+DTYG ++ ++ +++T+ AF
Sbjct: 391 EN-----ALAELEKKGAR-----TLDGELAFKLHDTYGFPLDLTADVCREREVTVDEAAF 440
Query: 473 EQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
++ + ++R +A+AA K+K + + + TF
Sbjct: 441 DEAM--ARQREQARAAG------------------KFKMSQGLEYSGAKTTFHGY----- 475
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA- 591
+++ D + GAS+ + H ++ D T YA +GGQ+ D G+
Sbjct: 476 -----EEIVFDDAKVVALYVDGASVQEVA--HGQQTVVVLDHTPFYAESGGQVGDQGLLA 528
Query: 592 ------YLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
+T+T + V +G +LE + G+VV + E+DA R
Sbjct: 529 NASVRFAVTDTLKVQADV-VGHHGTLEQGTLKVGDVV-----------KAEIDAVRRART 576
Query: 646 MRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-D 703
R H+ +HL++ ALR VL + QK V D+ DF+ + ++ + + VE+ +N +
Sbjct: 577 ARNHSATHLMHKALREVLGSHVQQKGSLVDPDKTRFDFA-HNAPMTDEQIRRVEEIVNAE 635
Query: 704 VIANQVQVDRRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGT 759
V+AN + R +PF + + GE Y D+V ++D+ SRE C GT
Sbjct: 636 VLANAPGIVRV------MPFDEAVKGGAMALFGEKYGDEVRVLDLG-----FSRELCGGT 684
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
HV TG I ++ G+R ++ +TGD++
Sbjct: 685 HVHRTGDIGLFKIVMEGGVAAGIRRVEAITGDNA 718
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG PY R +Q+ +R GGKHNDL G + HHT
Sbjct: 44 VPGNDPTLLFTNSGMVQFKDVFLGAESRPYSRATTAQRSVRAGGKHNDLENVGYTARHHT 103
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA A E LT LP ++L+ T
Sbjct: 104 FFEMLGNFSFGDYFKRDAIHYAWELLTG-VYQLPKEKLWVT 143
>gi|251773418|gb|EES53967.1| alanyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
Length = 884
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 248/784 (31%), Positives = 372/784 (47%), Gaps = 100/784 (12%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
S IR+SF +F GH V SS ++P GD ++ F N+GM FK+ FLG P P PR
Sbjct: 3 SLRIRNSFHGFFEGV-GHRRVPSSSLIPPGDPTLLFTNAGMVPFKDAFLGTEPPPAPRCV 61
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
+ Q+CVR GGKHNDL G HHTFFEM+GN+SF DY+K++A A E+LTK + L
Sbjct: 62 SIQRCVRAGGKHNDLDRVGFTRRHHTFFEMMGNFSFGDYFKKEAIAFAWEYLTK-TLGLS 120
Query: 134 LDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSS 192
L+ T F +D D+E +W + GV I + G K NFW+MG+TGPCG S
Sbjct: 121 PSVLWVTVF--TD------DDEAASLWQSVAGVDPSRIVRLGEKDNFWQMGNTGPCGPCS 172
Query: 193 EIHYDMK-----GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
EI D G P+ A V D + +EIWN+VF+ + R A + PL + IDTG+
Sbjct: 173 EILVDQGSAFSCGRPTCA---VGCDCDRYLEIWNLVFMQYDRNDAGILTPLPRPSIDTGM 229
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ERL ++LQ S ++TDLFLPL+E I K + PYGR + + D +YR+++D+
Sbjct: 230 GLERLASVLQGSQSNFETDLFLPLMEAIGKKT-RIPYGR-----GQGEKDFAYRVIADHV 283
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R T + + + P + LR +R A+ S D+ + +LS AE++ Y
Sbjct: 284 RASTFLVWEGLVPSNEGRGYVLRRFIRRAMQFSLDL--ALPTPFLPDLSRRFAELMAAPY 341
Query: 365 PEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL 424
PE+ ++++ +L E E+F E GL L V+ L
Sbjct: 342 PELAAGMDRVVTVLASEE------------------------ERFMKTLETGLPL-VQEL 376
Query: 425 TKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSK 484
+ AR+ T ++G+ F LYDT+GL +++ + AA +TL E F ++ E KE+ +
Sbjct: 377 ARS-ARERGETVLTGEELFWLYDTHGLPVDVVGDWAAPLGVTLDTEGFAVRMGEQKEQGR 435
Query: 485 AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCID 544
+ FP+ + ++ +R P L+ + G+
Sbjct: 436 RSWTGS--------RASFPLPASRLSSPVRFE-GYERLESPA---RLLLLASGE------ 477
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
+ + S++ W + D + Y GGQ+ D G G V
Sbjct: 478 ----------SEVQSVREGEEIWA--VTDVSPFYPEGGGQVGDQG-----RLVAPGGIVS 520
Query: 605 I-GELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL 663
I G G I G V+S VT G T +++VD +RLG HT +HLL+AALR+VL
Sbjct: 521 ISGAYRPYPGWIALRGKVLSGV-VTQGETVQLQVDRSLRLGARVHHTATHLLHAALRKVL 579
Query: 664 -TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELP 722
+ Q V D DFS +G ++ + +E +N I V+ ++
Sbjct: 580 GSHVRQAGSLVLPDRLRFDFS-HGAPITDGQIEEIEGMVNRWIGEGAPVEISEKNKADA- 637
Query: 723 FLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGV 782
+ E Y D V +++I +S E C GTH +T I S ++ G
Sbjct: 638 LASGAMAFFDEKYGDRVRVVEIPG----MSVELCGGTHALSTSEIGSFFILSESGVAAGT 693
Query: 783 RSIK 786
R I+
Sbjct: 694 RRIE 697
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 61/88 (69%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP GD ++ F N+GM FK+ FLG P P PR + Q+C+R GGKHNDL G HHT
Sbjct: 28 IPPGDPTLLFTNAGMVPFKDAFLGTEPPPAPRCVSIQRCVRAGGKHNDLDRVGFTRRHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTK 905
FFEM+GN+SF DY+K++A A E+LTK
Sbjct: 88 FFEMMGNFSFGDYFKKEAIAFAWEYLTK 115
>gi|407692346|ref|YP_006817135.1| alanyl-tRNA ligase [Actinobacillus suis H91-0380]
gi|407388403|gb|AFU18896.1| alanyl-tRNA ligase [Actinobacillus suis H91-0380]
Length = 874
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 257/816 (31%), Positives = 388/816 (47%), Gaps = 151/816 (18%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR SFLD+F +++GHT+V SS +VP D ++ F N+GM QFK+VFLGL PY R
Sbjct: 3 TTSEIRQSFLDFF-HSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEM+GN+SF DY+K+DA + E+LT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKQDAIQFGWEYLTSPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEG-------MKCNFWEMG 183
LP ++LY T + D+E DIW ++ GVP DHI + G NFW MG
Sbjct: 122 LPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMG 173
Query: 184 STGPCGYSSEIHYD--------MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTI 235
TGPCG +EI YD + G P D + IE+WNIVF+ R + T+
Sbjct: 174 DTGPCGPCTEIFYDHGDTFWGGLPGTPEE-------DGDRYIEVWNIVFMQFNRQADGTM 226
Query: 236 VPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTD 295
L K +DTG+G ER+ ++Q+ S Y+TD+F L I++V+G N TD
Sbjct: 227 EKLPKPSVDTGMGLERMTAVMQHVNSNYETDIFQTL---IKEVAG---------LLNVTD 274
Query: 296 LDT-SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQG 346
LD S R+++D+ R + +AD + P + LR ++R A LL +++ F K
Sbjct: 275 LDNKSLRVVADHIRACSYLIADGVIPSNEGRGYVLRRIIRRAVRHGNLLGAKEAFFYKLV 334
Query: 347 KLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPEL 406
+ + + EIL IQ ++ + E
Sbjct: 335 PTLATVMGHAGEILTQKQAHIQKTL-------------------------------KAEE 363
Query: 407 EQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLT 466
EQF E GL L LTK +SG++AF LYDTYG ++ ++ + +T
Sbjct: 364 EQFARTLERGLALLEDALTK-----VENNTLSGEVAFKLYDTYGFPLDLTADVCRERNIT 418
Query: 467 LCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPC 526
+ FE +++ +ER AKA+SN D + D + + YD + T
Sbjct: 419 IDEAGFEAEMSAQRER--AKASSNFG----TDYNNVIKVDGQTDF-IGYDNLEAQATVVG 471
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L +N G ++D+I +A + I D+T YA GGQ+
Sbjct: 472 LFSN-----------------------GKAVDTIHSGESAVI--ILDQTPFYAEMGGQVG 506
Query: 587 DIGV------AYLTNTTQENGKV--EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVD 638
D G+ + + TQ+ G+V IG+L S S + +T+ VE++
Sbjct: 507 DSGLISTEICEFTVSDTQKYGQVFGHIGQLTS------------GSLAIGDKVTAHVEIN 554
Query: 639 ARMRLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAV 697
R + H+ +HLL++ALR VL QK V D DFS E ++ + +
Sbjct: 555 RRQAITA--NHSATHLLHSALREVLGDHVAQKGSLVSEDALRFDFS-QPEAITKAQLEEI 611
Query: 698 EKYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCC 757
E+ +N I +QV M + + GE Y D V ++ +++ S E C
Sbjct: 612 ERIVNRKIRENIQVVIETMDIESAKQKGAMALF-GEKYGDVVRVVGMTE----FSIELCG 666
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
GTHV +TG I ++ + GVR ++ +TG+ +
Sbjct: 667 GTHVQHTGEIGLFKLVSEGAVAAGVRRVEAVTGEKA 702
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL PY R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+K+DA + E+LT P + LP ++LY T
Sbjct: 89 FFEMMGNFSFGDYFKQDAIQFGWEYLTSPQWLGLPKEKLYVT 130
>gi|322434171|ref|YP_004216383.1| alanyl-tRNA synthetase [Granulicella tundricola MP5ACTX9]
gi|321161898|gb|ADW67603.1| alanyl-tRNA synthetase [Granulicella tundricola MP5ACTX9]
Length = 941
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 256/825 (31%), Positives = 388/825 (47%), Gaps = 102/825 (12%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
IR FL +F + H V SS +VP D ++ F N+GM QFK+VFLG Y R
Sbjct: 5 SGSQIREDFLRFF-EGKAHRRVHSSSLVPANDPTLLFTNAGMNQFKDVFLGAEKRDYSRA 63
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
A+SQKCVR GGKHNDL G HHTFFEMLGN+SF DY+K+DA A E LT +
Sbjct: 64 ASSQKCVRAGGKHNDLENVGFTRRHHTFFEMLGNFSFGDYFKKDAIAYAWELLTSAAWFA 123
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
+ ++LY T F G ++ +P DEE WLE+GVP + I + G K NFW MG TGPCG
Sbjct: 124 IDKEKLYVTIFEGDEK--VPRDEEAYQFWLEVGVPAERIFELGAKDNFWAMGDTGPCGPC 181
Query: 192 SEIHYDMKGEPSSALARV--NADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
SEI+YD+ S + A V D +EIWN+VF+ +R S T+ PL K IDTG+G
Sbjct: 182 SEIYYDLGLAASESGADVPFGEDDQRYMEIWNLVFMQFERASDGTLTPLPKPSIDTGMGL 241
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLD---------TSY 300
ER+ +LQ S YDTDLF+PL++ +++ KP TS D+ S
Sbjct: 242 ERVSCVLQGVMSNYDTDLFIPLIKRAAELT-LKP------TSENPDMGHPVGDEKGAASL 294
Query: 301 RMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVKEL 352
R+++D++R T +AD + P + LR ++R LL E F + K V++
Sbjct: 295 RIIADHARAATFLIADGVQPANEGRGYVLRKILRRGIRHGRLLGQEQPFMFEMVKAVRD- 353
Query: 353 SYNIAEILGDVYPEIQDSINKI-QLILGEESRIFDNLRKA---------AVKE------- 395
+A YPE+ + ++ +++L EE + + KA A+K+
Sbjct: 354 EMKVA------YPELVEHAERVSKVVLAEEEQFARVIEKAMNELDRTLDAIKQLPSVLDR 407
Query: 396 WKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEI-SGDMAFTLYDTYGLSKN 454
W ++ P+ ++ L + + K AR S + G AF ++TYGL +
Sbjct: 408 WNKTPESAPDYKEAEAAFWVTFELVHRTVNKNEARPKSRHGMFPGRTAFFFFETYGLPID 467
Query: 455 IIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH 514
+++ A + L FE+ E +ER++A PV + K ++
Sbjct: 468 FMEDAARDAGIELDRAEFEKAKIEEQERARASWKGGSQKT------ASPVYRELAKTEF- 520
Query: 515 YDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDK 574
+ Y+ +D V ++ D V H + G ++ D
Sbjct: 521 -----EGYSALRVDGARVIALVKDGVGV---HVLSPGEEGE--------------VVLDA 558
Query: 575 TNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSR 634
T+ YA +GGQ+ D+G Y + T +V G ++G H V++ + G
Sbjct: 559 TSFYADSGGQVGDVGWLYAADHTTVLAEVR-GANKPVQGVFAH--KVIAKVAIAVGDEVD 615
Query: 635 VEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDS 693
V+ +R MR HT +HLL+AALR VL Q V D DFS + ++ +
Sbjct: 616 TVVNGEVRAATMRNHTGTHLLHAALREVLGKHVKQAGSLVNRDRLRFDFSHF-TGVAEEE 674
Query: 694 VAAVEKYINDVIANQVQVDRRHMRASELPFLTHLT-----VIPGEIYPDDVILIDISDKE 748
+ +E +N + V+ ++P + + GE Y D V ++ I +
Sbjct: 675 LREIETIVNAQVLKNTPVE----TLVDVPIDVAVNDYGAMALFGEKYGDKVRVVRIGE-- 728
Query: 749 NVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
S E C GTH TG I ++G S GVR ++ ++G +
Sbjct: 729 --FSTELCGGTHTLATGEIGVIKLVGESSVASGVRRLEAISGTGA 771
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLG Y R A+SQKC+R GGKHNDL G HHT
Sbjct: 31 VPANDPTLLFTNAGMNQFKDVFLGAEKRDYSRAASSQKCVRAGGKHNDLENVGFTRRHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFTF 919
FFEMLGN+SF DY+K+DA A E LT ++ ++LY T
Sbjct: 91 FFEMLGNFSFGDYFKKDAIAYAWELLTSAAWFAIDKEKLYVTI 133
>gi|323526792|ref|YP_004228945.1| alanyl-tRNA synthetase [Burkholderia sp. CCGE1001]
gi|323383794|gb|ADX55885.1| alanyl-tRNA synthetase [Burkholderia sp. CCGE1001]
Length = 890
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 249/812 (30%), Positives = 391/812 (48%), Gaps = 140/812 (17%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG PY R
Sbjct: 17 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAESRPYSR 75
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HHTFFEMLGN+SF DY+KRDA A E LT
Sbjct: 76 ATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTG-VYQ 134
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP ++L+ T + D+E DIW E+GVP + I + G NFW+M
Sbjct: 135 LPKEKLWVTVY--------QEDDEAHDIWAKEVGVPVERIIRIGDNKGARYASDNFWQMA 186
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG SEI YD G P S D + IEIWN+VF+ R + + PL
Sbjct: 187 DTGPCGPCSEIFYDHGPEVWGGPPGSP----EEDGDRYIEIWNLVFMQFNRDAQGNMTPL 242
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S Y+ DLF L++ + A+ G + T+N
Sbjct: 243 PKQCVDTGMGLERIAAVLQHVHSNYEIDLFQALIK-----AAARETGVSDLTNN------ 291
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELSY 354
S ++++D+ R + + D + P + LR +VR A+ +K+ K+G +
Sbjct: 292 SLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAI---RHGYKLGKKGSFFHRMVA 348
Query: 355 NIAEILGDVYPEIQDSINKIQLIL-GEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
++ E +G YPE++D+ ++ +L EE R F+ + L ELE+
Sbjct: 349 DLVEQMGSAYPELKDAQQRVTDVLRQEEERFFETIEHG----MSILENALAELEK----- 399
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
G K L G++AF L+DTYG ++ ++ +++T+ AF+
Sbjct: 400 -----KGRKTL-------------DGELAFKLHDTYGFPLDLTADVCREREVTVDEAAFD 441
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
+ + ++R +A+AA K+K + + + TF
Sbjct: 442 EAM--ARQREQARAAG------------------KFKMAQGLEYSGAKTTFHGY------ 475
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV--- 590
+++ D + GAS+ + A V + D T YA +GGQ+ D G+
Sbjct: 476 ----EEIVFDDAKVVALYVDGASVQEVAQGQQAVV--VLDHTPFYAESGGQVGDQGLLAN 529
Query: 591 AYLTNTTQENGKVE---IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMR 647
A + + KV+ +G +LE I+ G+VV + E+DA R R
Sbjct: 530 ASVRFAVADTLKVQADVVGHHGTLEQGILKVGDVV-----------KAEIDAVRRARTAR 578
Query: 648 AHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVI 705
H+ +HL++ ALR VL + QK V D+ DF+ + ++ + + VE+ +N +V+
Sbjct: 579 NHSATHLMHKALREVLGSHVQQKGSLVDPDKTRFDFA-HNAPMTDEQIRRVEEIVNAEVL 637
Query: 706 ANQVQVDRRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHV 761
AN + R +PF + + GE Y D+V ++D+ SRE C GTHV
Sbjct: 638 ANAPGIVRV------MPFDEAVKGGAMALFGEKYGDEVRVLDLG-----FSRELCGGTHV 686
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I ++ G+R ++ +TGD++
Sbjct: 687 HRTGDIGLFKIVMEGGVAAGIRRVEAITGDNA 718
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG PY R +Q+ +R GGKHNDL G + HHT
Sbjct: 44 VPGNDPTLLFTNSGMVQFKDVFLGAESRPYSRATTAQRSVRAGGKHNDLENVGYTARHHT 103
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA A E LT LP ++L+ T
Sbjct: 104 FFEMLGNFSFGDYFKRDAIHYAWELLTG-VYQLPKEKLWVT 143
>gi|295688603|ref|YP_003592296.1| alanyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
gi|295430506|gb|ADG09678.1| alanyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
Length = 880
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 248/797 (31%), Positives = 375/797 (47%), Gaps = 111/797 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FLDYF H +V S+P+VP D ++ FVN+GM FKNVF G +PR A+SQ
Sbjct: 7 IRSTFLDYFGKAD-HAVVPSAPLVPQNDPTLLFVNAGMVPFKNVFTGAETPAHPRAASSQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K A A LT LP ++
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQAIHHAWTLLTGE-FKLPKEK 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
L T + D+E D+W ++ G+ D I + NFW MG TGPCG SEI
Sbjct: 125 LLVTVY--------HTDDEAADLWKKIAGLSDDRIIRIPTSDNFWSMGDTGPCGPCSEIF 176
Query: 196 YD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
YD G P S + D + IEIWN+VF+ ++++ V L K IDTG+G E
Sbjct: 177 YDHGPSIAGGPPGSP----DEDGDRFIEIWNLVFMQFEQLAGGDRVSLPKPSIDTGMGLE 232
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +LQ + YD DLF L+ +++G K G D S+R+++D+ R
Sbjct: 233 RVAAVLQGVHNNYDVDLFKALIAASVELTGVKAEG---------DQAPSHRVIADHLRSS 283
Query: 311 TVALADNMFPDATAK-------LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+ LAD + P + +R +R A L+ Q L+ L+ + +G
Sbjct: 284 SFLLADGVSPSNEGRGYVLRRIMRRAMRHAYLLG------AQEPLMHRLAPTLVAEMGQA 337
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
YPE++ + E+ I + LR+ E E+F L G+
Sbjct: 338 YPELRRA----------EASIVETLRQ--------------EEERFRTT----LGRGMGL 369
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + A + + G+ AF LYDTYG ++ Q+ AK LT+ + F+ + + +E +
Sbjct: 370 LDEATANLSAGGVLDGETAFKLYDTYGFPLDLTQDAVRAKGLTVDTDGFDAAMQKQREMA 429
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
+A A + F + + D+ Y+T T G+V Q
Sbjct: 430 RANWAGS--GQQGAAAAWFAIKEKNGATDFVGYET-----------TETTGVV---QAIV 473
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
+D ++ A G +++ ++ D+T+ YA +GGQ D G L +EN
Sbjct: 474 VDGAEVQSATGGTTVE-----------VLLDRTSFYAESGGQAGDQGA--LEANGRENRV 520
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
++ + A +H V S ++ G V VDA R H+ +HL++AAL V
Sbjct: 521 IDTQKQAGE----LHVHRVELSGELKVGDKVVVSVDADRRQTTRSNHSAAHLVHAALHHV 576
Query: 663 LTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L QK V + DFS +G L+ + + +E +N VI V + + M A +
Sbjct: 577 LGPHVAQKGQMVDGERMRFDFS-HGGPLTPEELDKIEAEVNAVIRQNVPAETKEM-APQE 634
Query: 722 PFLTHLTVIPGEIYPDDVILI----DISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
+ GE Y D V ++ ++D+ S E C GTHV TG I ++ +
Sbjct: 635 AIEAGAVALFGEKYGDSVRVLTLGKSLTDESKAYSVELCGGTHVSRTGDIALFKIVSEQG 694
Query: 778 YNHGVRSIKCLTGDSSK 794
GVR I+ LTG++++
Sbjct: 695 VAAGVRRIEALTGEAAR 711
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ FVN+GM FKNVF G +PR A+SQKC+R GGKHNDL G + HHT
Sbjct: 29 VPQNDPTLLFVNAGMVPFKNVFTGAETPAHPRAASSQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K A A LT LP ++L T
Sbjct: 89 FFEMLGNFSFGDYFKEQAIHHAWTLLTG-EFKLPKEKLLVT 128
>gi|336323805|ref|YP_004603772.1| alanyl-tRNA synthetase [Flexistipes sinusarabici DSM 4947]
gi|336107386|gb|AEI15204.1| alanyl-tRNA synthetase [Flexistipes sinusarabici DSM 4947]
Length = 872
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 247/798 (30%), Positives = 385/798 (48%), Gaps = 116/798 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ K IR FLD+F + HT+VKSS +VP D ++ F N+GM QFK+ FLG+ Y R
Sbjct: 1 MTGKEIRQKFLDFF-EQKDHTIVKSSSLVPENDPTLLFTNAGMNQFKDTFLGVEKRNYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A QK VR GGKHNDL GR + HHTFFEMLGN+SF DY+KR A EFLT+ +
Sbjct: 60 AATCQKVVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKRGVINYAWEFLTEV-LG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
L ++LY + F D+E +IW E+G+P + I K G K NFW MG TGPCG
Sbjct: 119 LDKEKLYISVF--------HKDDEAFNIWKNEIGIPEERISKLGEKENFWSMGDTGPCGP 170
Query: 191 SSEIHYDMKGEPSSALARVNADR----NDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEIH D P R + D + +E+WN+VF+ + R + T+ PL K IDTG
Sbjct: 171 CSEIHIDQG--PKIGCGRSDCDPECDCDRFLELWNLVFMQYDRDAEGTLHPLPKPSIDTG 228
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+G ER+ ++QN TS +DTDL P++E ++G + + D S R+++D+
Sbjct: 229 MGLERIAAVVQNVTSNFDTDLIRPIIEETSSIAGIR-------YKDNEKFDISLRVIADH 281
Query: 307 SRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KELSYNIAEI- 359
+R T ++D + P + L+ ++R A+ + G+L+ + Y I E
Sbjct: 282 ARATTFLISDGVIPANEGRGYVLKRIMRRAM---------RHGRLIGIKENFFYKICEFV 332
Query: 360 ---LGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
+ D Y E+ D N I I+ +E F N +K + L++
Sbjct: 333 VDFMSDHYLELVDKKNYISKIVKQEESRFKNTLTTGLKITESLIE--------------- 377
Query: 417 LVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKL 476
KY + I G FTLYDTYG ++++++A +L E F++++
Sbjct: 378 -----KYKYDKY--------IPGKEIFTLYDTYGFPVDLLEDIAEENGFSLDMEGFKKEM 424
Query: 477 NELKERSKAKAASNVPDIDLMDLKHFPVTDDKY-KYDYHYDTNSKRYTFPCLDTNLVGIV 535
+ +E++K +A S D D+++ K + T Y L++ ++GI+
Sbjct: 425 SAQQEKAK-RAWSGSGD---------TAVDERFKKLASKFRTEFDGYDKLSLESEILGII 474
Query: 536 IGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTN 595
+ A+ G I+ +I KT Y GG+ D G Y+ +
Sbjct: 475 -------SKGNNTEEAKQGDKIE-----------IILSKTPFYPEGGGETGDKG--YIKS 514
Query: 596 TTQENGKVEIGELAS-LEGKIVHFGNVVS-SFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
+N E+ + E IVH +++ + KV +T+ EV++ R + HT++H
Sbjct: 515 ---DNAVAEVKDTKKYAESLIVHEAEILNGTLKVGEIITA--EVNSEFRKAVEKNHTSTH 569
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
L++ ALR VL Q V S++ DF+ + LS + + +E +N I + V
Sbjct: 570 LIHKALREVLGDHVRQSGSLVDSEKLRFDFTHFS-PLSREEIVEIENIVNKKIQENLPV- 627
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
++ + + I GE Y D V ++ ++D S+E C G HV TG I +
Sbjct: 628 KKEITDIDSAIQKGAMAIFGEKYGDTVRVVSVND----FSKELCGGCHVNYTGEIGLFKI 683
Query: 773 IGYKSYNHGVRSIKCLTG 790
S G+R I+ LTG
Sbjct: 684 TTETSVASGIRRIEALTG 701
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+ FLG+ Y R A QK +R GGKHNDL GR + HHT
Sbjct: 28 VPENDPTLLFTNAGMNQFKDTFLGVEKRNYSRAATCQKVVRAGGKHNDLENVGRTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KR A EFLT+ + L ++LY +
Sbjct: 88 FFEMLGNFSFGDYFKRGVINYAWEFLTE-VLGLDKEKLYIS 127
>gi|319790646|ref|YP_004152279.1| alanyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
gi|317115148|gb|ADU97638.1| alanyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
Length = 878
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 245/789 (31%), Positives = 381/789 (48%), Gaps = 106/789 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IR +FL +F +GH VKSSP+VP D ++ F N+GM QFK+ FLG P+ R + Q
Sbjct: 8 IRETFLKFF-EEKGHARVKSSPLVPKNDPTLLFTNAGMVQFKDYFLGKEEPPFKRATSCQ 66
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KC+R GGKHNDL GR HHTFFEMLGN+SF DY+K +A + A E +T+ LP +R
Sbjct: 67 KCMRAGGKHNDLENVGRTGRHHTFFEMLGNFSFGDYFKEEAIKFAWELVTEV-FKLPKER 125
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
LY + + DEE IW ++ GVP++ I + G K NFW MG TGPCG SEI+
Sbjct: 126 LYVSVY--------KEDEEAFRIWRDVVGVPQERIYRLGEKDNFWAMGDTGPCGPCSEIY 177
Query: 196 YDMKGE-----PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
YD +GE P+ + + DR +EIWN+VF+ +R + + PL K IDTG+G E
Sbjct: 178 YD-RGEEFACGPNCGIGSCDCDR--YLEIWNLVFMQFERDESGKLRPLEKPSIDTGMGLE 234
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ ++LQ S Y+TDL PL++ K+SG PYGR+ + DTS R+++D+ R +
Sbjct: 235 RIASVLQGVPSNYETDLLFPLVKWASKLSGV-PYGRSEKS------DTSMRVIADHLRAM 287
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
T ++D + P + LR ++R A + +K G + + +I+G YPE+
Sbjct: 288 TFLISDGVLPANEGRGYVLRRIIRRASRHGR-LLGIK-GPFLYSGVKEVVKIMGKAYPEL 345
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ S ++ ++ E F E GL + + + +
Sbjct: 346 ELSRELVERVVRREEERFSRTL------------------------ERGLQIFQEIIDEL 381
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK- 486
+R + I G F LYDT+G +++ E+A + L + E FE+ L E +ER++
Sbjct: 382 KSRSEKV--IPGSEVFKLYDTFGFPIDLVLEVANDEGLRVDLEGFEKLLKEQRERARKAW 439
Query: 487 --AASNV--PDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
A V P++ + L+H P Y++ Y +VGI+ G+++
Sbjct: 440 KGGAQKVVSPELQRLSLEH-PTLFTGYEHLEEY-------------AKVVGILKGEEL-- 483
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
++SI A V I D+T Y GGQ+ D G T++
Sbjct: 484 --------------VESISEGEEATV--ILDRTPFYPEKGGQVGDTGTLEGTDSL----- 522
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
++ + ++ K++ V K++ G VD R RAHT +HLL+ AL+ V
Sbjct: 523 CKVTDTQNITEKLIGHKVKVLRGKLSVGDYVEARVDEERRRAITRAHTATHLLHKALKEV 582
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L Q V D DF+ + E + + + AVE+ +N I V + E+
Sbjct: 583 LGNHVKQAGSLVLPDRLRFDFTHF-EAPTKEELRAVEELVNRWITENYPV-----KIEEM 636
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
P+ L ++ + + +S E C GTHV +G I + S + G
Sbjct: 637 PYDEALERGAIALFGEKYGSVVRVVDVGGVSVELCGGTHVKRSGDIGFFKLTSESSISSG 696
Query: 782 VRSIKCLTG 790
R ++ + G
Sbjct: 697 TRRVEAVVG 705
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+ FLG P+ R + QKC+R GGKHNDL GR HHT
Sbjct: 30 VPKNDPTLLFTNAGMVQFKDYFLGKEEPPFKRATSCQKCMRAGGKHNDLENVGRTGRHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K +A + A E +T+ LP +RLY +
Sbjct: 90 FFEMLGNFSFGDYFKEEAIKFAWELVTE-VFKLPKERLYVS 129
>gi|332289629|ref|YP_004420481.1| alanyl-tRNA synthetase [Gallibacterium anatis UMN179]
gi|330432525|gb|AEC17584.1| alanyl-tRNA synthetase [Gallibacterium anatis UMN179]
Length = 874
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 262/815 (32%), Positives = 386/815 (47%), Gaps = 149/815 (18%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR S+LD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLG+ Y R
Sbjct: 3 TTAEIRQSYLDFF-HSKGHQIVASSSLVPENDPTLLFTNAGMNQFKDVFLGIDKRSYHRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA A EFLT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIHFAWEFLTSPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP ++L+ T + DEE +IW ++GVP D I + G NFW+MG
Sbjct: 122 LPKEKLWVTVY--------ETDEEAYNIWHQQIGVPADRIVRIGDNKGAPYASDNFWQMG 173
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P SA D + IEIWNIVF+ + R++ T+ L
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSA----EEDGDRYIEIWNIVFMQYNRLADGTMEKL 229
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD D+F L+ + +++G K +
Sbjct: 230 PKPSVDTGMGLERISAVLQHVNSNYDIDIFKVLIAKVAEITGEKDLA-----------NK 278
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD ++P + LR ++R A LL ++D F K LV
Sbjct: 279 SLRVIADHIRSCAYLIADGVYPSNEGRGYVLRRIIRRAVRHGHLLGAKDTFFYK---LVP 335
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L +A+ G++ E Q I K+ + E EQF
Sbjct: 336 TLIEVMAQA-GEILKEKQVHIEKL---------------------------LRLEEEQFA 367
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L +LA +SG++AF LYDTYG ++ ++ + + + +
Sbjct: 368 RTLERGLAL----LDAELASLKG-NVLSGEVAFKLYDTYGFPLDLTADVCRERDIAIDED 422
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYD-YHYDTNSKRYTFPCLDT 529
F +++ +ER A+AAS MD + D ++ YH + + + +D
Sbjct: 423 GFNREMEAQRER--AQAASQFG----MDYNNLIRVDGTTAFEGYHAAESLAKVSAIFVD- 475
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
G ++ +Q +A + I + T YA +GGQ+ D G
Sbjct: 476 ------------------------GKEVNQVQAGQSAVI--ILENTPFYAESGGQVGDSG 509
Query: 590 V------AYLTNTTQENGKV--EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
+ + N TQ+ G+V IGEL E K+ G T VDA
Sbjct: 510 ILESADALFTVNDTQKYGQVFGHIGELKKGEIKV--------------GQTLHAVVDAER 555
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HLL+AALR+VL T QK V DFS E +S +A +E+
Sbjct: 556 RQATSLNHSATHLLHAALRQVLGTHVAQKGSLVSDKLLRFDFS-QPEAISKAQIAEIERI 614
Query: 701 INDVI-ANQ-VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCG 758
+N I AN V V+ + A++ L GE Y D V +I + D S E C G
Sbjct: 615 VNSQIRANHVVSVEEMDIEAAKAKGAMALF---GEKYGDRVRVITMGD----FSIELCGG 667
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
HV TG I ++ + G R I+ +TG+ +
Sbjct: 668 IHVKRTGDIGLFKIVSESAIAAGTRRIEAVTGEEA 702
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLG+ Y R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPENDPTLLFTNAGMNQFKDVFLGIDKRSYHRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA A EFLT P + LP ++L+ T
Sbjct: 89 FFEMLGNFSFGDYFKHDAIHFAWEFLTSPQWLGLPKEKLWVT 130
>gi|307249853|ref|ZP_07531828.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|306858107|gb|EFM90188.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
str. M62]
Length = 874
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 264/830 (31%), Positives = 394/830 (47%), Gaps = 146/830 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR SFLD+F +++GHT+V SS +VP D ++ F N+GM QFK+VFLGL PY R
Sbjct: 3 TTSEIRQSFLDFF-HSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEM+GN+SF DY+K DA + E+LT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEG-------MKCNFWEMG 183
LP ++LY T + D+E DIW ++ GVP DHI + G NFW MG
Sbjct: 122 LPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMG 173
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IE+WNIVF+ R++ T+ L
Sbjct: 174 DTGPCGPCTEIFYDHGETFWGGLPGSP----EEDGDRYIEVWNIVFMQFNRLADGTMEKL 229
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ ++Q+ S Y+TD+F L I++V+G N TDLD
Sbjct: 230 PKPSVDTGMGLERMTAVMQHVNSNYETDIFQTL---IKEVAG---------LLNVTDLDN 277
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLV 349
S R+++D+ R + +AD + P + LR ++R A LL +++ F K +
Sbjct: 278 KSLRVVADHIRACSYLIADGVVPSNEGRGYVLRRIIRRAVRHGNLLGAKEAFFYKLVPTL 337
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
+ + E+L IQ ++ + E EQF
Sbjct: 338 ATVMGHAGEVLTQKQAHIQKTL-------------------------------KAEEEQF 366
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L LTK +SG++AF LYDTYG ++ ++ ++LT+
Sbjct: 367 ARTLERGLALLEDALTK-----VENNTLSGEVAFKLYDTYGFPLDLTADVCRERELTIDE 421
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
FE ++ +ER AKA+SN D + + + + YD + T L +
Sbjct: 422 AGFEAEMTAQRER--AKASSNFG----TDYNNVIKVEGQTDF-IGYDNLEAQATIVGLFS 474
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
N G ++D+IQ +A + I D+T YA GGQ+ D G
Sbjct: 475 N-----------------------GKAVDTIQSGESAVI--ILDQTPFYAEMGGQVGDSG 509
Query: 590 VA------YLTNTTQENGKV--EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
+ + N TQ+ G+V IG+L S G++ KVT V A
Sbjct: 510 LISTEICNFTVNDTQKYGQVFGHIGQLTS--------GSLSIGDKVTA------TVHATR 555
Query: 642 RLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R+ H+ +HLL++ALR VL QK V + DFS E +S + +E+
Sbjct: 556 RIAITANHSATHLLHSALREVLGDHVAQKGSLVSENILRFDFS-QPEAISKSQLEEIERI 614
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I +QV M + + GE Y D V ++ +++ S E C GTH
Sbjct: 615 VNRKIRENIQVTIETMDIESAKKKGAMALF-GEKYGDVVRVVGMTE----FSIELCGGTH 669
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN-GKHLSTAASF 809
V TG I ++ + G+R ++ +T +++ + N K L +A F
Sbjct: 670 VQRTGDIGLFKLVSEGAVAAGIRRVEAVTAETAIEWLHNQQKVLQQSAEF 719
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL PY R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+K DA + E+LT P + LP ++LY T
Sbjct: 89 FFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEKLYVT 130
>gi|53729167|ref|ZP_00134001.2| COG0013: Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208134|ref|YP_001053359.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
gi|205829968|sp|A3N018.1|SYA_ACTP2 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|126096926|gb|ABN73754.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
Length = 874
Score = 336 bits (861), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 263/830 (31%), Positives = 395/830 (47%), Gaps = 146/830 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR SFLD+F +++GHT+V SS +VP D ++ F N+GM QFK+VFLGL PY R
Sbjct: 3 TTSEIRQSFLDFF-HSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEM+GN+SF DY+K DA + E+LT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEG-------MKCNFWEMG 183
LP ++LY T + D+E DIW ++ GVP DHI + G NFW MG
Sbjct: 122 LPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMG 173
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IE+WNIVF+ R++ T+ L
Sbjct: 174 DTGPCGPCTEIFYDHGETFWGGLPGSP----EEDGDRYIEVWNIVFMQFNRLADGTMEKL 229
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ ++Q+ S Y+TD+F L I++V+G N +DLD
Sbjct: 230 PKPSVDTGMGLERMTAVMQHVNSNYETDIFQTL---IKEVAG---------LLNVSDLDN 277
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLV 349
S R+++D+ R + +AD + P + LR ++R A LL +++ F K +
Sbjct: 278 KSLRVVADHIRACSYLIADGVVPSNEGRGYVLRRIIRRAVRHGNLLGAKEAFFYKLVPTL 337
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
+ + E+L IQ ++ + E EQF
Sbjct: 338 ATVMGHAGEVLTQKQAHIQKTL-------------------------------KAEEEQF 366
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L LTK +SG++AF LYDTYG ++ ++ ++LT+
Sbjct: 367 ARTLERGLALLEDALTK-----VENNTLSGEVAFKLYDTYGFPLDLTADVCRERELTIDE 421
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
FE ++ +ER AKA+SN D + + + + YD + T L +
Sbjct: 422 AGFEAEMTAQRER--AKASSNFG----TDYNNVIKVEGQTDF-IGYDNLEAQATIVGLFS 474
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
N G ++D+IQ +A + I D+T+ YA GGQ+ D G
Sbjct: 475 N-----------------------GKAVDTIQSGESAVI--ILDQTSFYAEMGGQVGDSG 509
Query: 590 VA------YLTNTTQENGKV--EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
+ + N TQ+ G+V IG+L S G++ KVT V A
Sbjct: 510 LISTEICNFAVNDTQKYGQVFGHIGQLTS--------GSLSIGDKVTA------TVHATR 555
Query: 642 RLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R+ H+ +HLL++ALR VL QK V + DFS E +S + +E+
Sbjct: 556 RIAITANHSATHLLHSALREVLGDHVAQKGSLVSENILRFDFS-QPEAISKSQLEEIERI 614
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I +QV M + + GE Y D V ++ +++ S E C GTH
Sbjct: 615 VNRKIRENIQVTIETMDIESAKKKGAMALF-GEKYGDVVRVVGMTE----FSIELCGGTH 669
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN-GKHLSTAASF 809
V TG I ++ + G+R ++ +T +++ + N K L +A F
Sbjct: 670 VQRTGDIGLFKLVSEGAVAAGIRRVEAVTAETAIEWLHNQQKVLQQSAEF 719
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL PY R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+K DA + E+LT P + LP ++LY T
Sbjct: 89 FFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEKLYVT 130
>gi|299131739|ref|ZP_07024934.1| alanyl-tRNA synthetase [Afipia sp. 1NLS2]
gi|298591876|gb|EFI52076.1| alanyl-tRNA synthetase [Afipia sp. 1NLS2]
Length = 888
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 247/822 (30%), Positives = 386/822 (46%), Gaps = 110/822 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS FL++F GH +V SSP+VP D ++ F N+GM QFKNVF GL PY R SQ
Sbjct: 7 IRSGFLNFFAKN-GHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEKRPYQRATTSQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF +Y+K A +A +TK +LP DR
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGNYFKDRAIELAWTLITKD-FALPKDR 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
L T + D+E +W ++ G+P I + G NFW+MG TGPCG SEI
Sbjct: 125 LLVTVYA--------EDDEAFGLWKKIAGLPESRIVRIGTSDNFWQMGDTGPCGPCSEIF 176
Query: 196 YDMKGE-PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVT 254
+D + P + D + IEIWN+VF+ +++ PL IDTG+G ER+
Sbjct: 177 FDHGDKVPGGPPGSPDEDGDRFIEIWNLVFMQFDQIAPGNRNPLPHPSIDTGMGLERIAA 236
Query: 255 ILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVAL 314
+LQ K YD DLF+ L+ I ++GA P+G S R+++D+ R + +
Sbjct: 237 VLQGKHDNYDIDLFVALIRAISDLTGADPHGAQ---------KASLRVIADHLRASSFLI 287
Query: 315 ADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSI 371
AD + P + LR ++R A+ ++ + K L+ L + + +G YPE+ +
Sbjct: 288 ADGVLPSNEGRGYVLRRIMRRAMRHAQ-LLGAKD-PLMHRLVWALVREMGQAYPELVRAE 345
Query: 372 NKIQLILG-EESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLAR 430
I+ L EE+R L + I++E L +
Sbjct: 346 ALIEETLKLEETRFRKTLDRG-----------------LAILDEKSAALHKGDM------ 382
Query: 431 DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASN 490
G+ AFTLYDTYG ++ Q+ + + + +F + ER KAKA
Sbjct: 383 ------FDGETAFTLYDTYGFPLDLTQDALRNRGIGVDLASFTDAM----ERQKAKA--- 429
Query: 491 VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRH 550
+ + DT +++ FP + +G +
Sbjct: 430 -----------------RASWAGSGDTAAEKIWFPLREELGATEFLGYDTEIAEGVVTAL 472
Query: 551 ARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA--------YLTNTTQENGK 602
+ GAS++S++ A V + ++T Y +GGQ+ D GV +T+T ++ G
Sbjct: 473 VKDGASVESLKAGDAASV--VLNQTPFYGESGGQVGDTGVLTGDGGVRFRVTDTQKKAGD 530
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA-HTTSHLLNAALRR 661
+ VH G + + G ++EVD R G +RA H+ +HLL+ ALR+
Sbjct: 531 L-----------FVHIGQLEQG-TLKKGAPLQLEVD-HARRGAIRANHSATHLLHEALRQ 577
Query: 662 VLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL Q+ V + DF+ + + ++ D ++ +E ND++ +V R M E
Sbjct: 578 VLGDHIAQRGSLVSPERLRFDFA-HTKPITPDELSRIEDIANDIVLENGEVTTRLM-GIE 635
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKE-NVI--SREPCCGTHVFNTGHIESCTVIGYKS 777
+ + GE Y D+V ++ + N + S E C GTHV TG I ++ G +
Sbjct: 636 DARSSGARALFGEKYGDEVRVVSMGQGSGNALGWSVELCGGTHVRRTGDIGLVSITGESA 695
Query: 778 YNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIP 819
GVR I+ LTG +++ A + + A+ + ++P
Sbjct: 696 VASGVRRIEALTGRAARQAANHSIQTAKTAAAELKTTLEDMP 737
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFKNVF GL PY R SQKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFTNAGMVQFKNVFTGLEKRPYQRATTSQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF +Y+K A +A +TK +LP DRL T
Sbjct: 89 FFEMLGNFSFGNYFKDRAIELAWTLITK-DFALPKDRLLVT 128
>gi|300725879|ref|ZP_07059342.1| alanine--tRNA ligase [Prevotella bryantii B14]
gi|299776816|gb|EFI73363.1| alanine--tRNA ligase [Prevotella bryantii B14]
Length = 888
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 253/803 (31%), Positives = 373/803 (46%), Gaps = 110/803 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR S+L YF ++GH +V S+PIV D ++ F N+GM Q+K++ LG T P PR
Sbjct: 2 MTANEIRDSYLKYF-ESKGHVIVPSAPIVVKDDPTLMFTNAGMNQWKDIILG-TKEPEPR 59
Query: 72 V-ANSQKCVRVGGKHNDLSCAGRDSY--HHTFFEMLGNWSFNDYYKRDACRMALEFLTKP 128
A++QKC+RV GKHNDL GRDS HHT FEMLGNWSF DY+K A MA E+L
Sbjct: 60 RRADTQKCLRVSGKHNDLEEVGRDSALSHHTMFEMLGNWSFGDYFKEGAIDMAYEYLVDV 119
Query: 129 PVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPC 188
P D LY T F G + L D+E W E P++HI NFWEMG GPC
Sbjct: 120 LKLDPKD-LYVTVFEGDEAENLERDDEAAKFW-EKHFPKNHIVNGNKHDNFWEMGDQGPC 177
Query: 189 GYSSEIHYDMKGEPSSALA----RVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
G +EIH D + E A VN D +IEIWN VF+ + R + T+ PL ID
Sbjct: 178 GPCTEIHIDFRSEEEKAKVPGEELVNKDHPKVIEIWNNVFMQYNRKADGTLEPLKMQVID 237
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTD-------LD 297
TG+GFERLV ++Q K S YDTD+F P+++ IE++SG K Y TF + + +D
Sbjct: 238 TGMGFERLVRLMQGKNSNYDTDIFTPIIDEIERISG-KKYNHTFPEGDNGEGINEEQKVD 296
Query: 298 TSYRMLSDYSRMITVALADNMFPD---ATAKLRNVVRDALLISEDVFKVKQGKLVKELSY 354
+ R+++D+ R + A+AD P A +R ++R A+ K+ + K L
Sbjct: 297 IAIRVVADHLRAVAFAIADGQLPSNAKAGYVIRRILRRAVRYYYTFLDQKEAFMFKLLPT 356
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
+AE +G YPE++ I ++ EE F LR
Sbjct: 357 LVAE-MGGAYPELKAQQELIGRVMKEEEDSF--LRT------------------------ 389
Query: 415 PGLVLGVKYLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF 472
L G+ L + + TE+ G AF L+DTYG ++ + + T+ + F
Sbjct: 390 --LEKGINLLNGDMETLKANGKTELDGASAFRLFDTYGFPLDLTELICTENGYTVDEKGF 447
Query: 473 EQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
+++ K++++A+ A+ V + D +K + YDY +PC
Sbjct: 448 NEEM--AKQKARARNAAAVENGDWQVIKEG--EQEFVGYDYS--------EYPC------ 489
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAY 592
H +R+ + + + N + L+ D T Y GGQ+ D G
Sbjct: 490 -------------HILRYRQ-------VTQKKNTFYELVLDHTPFYGEMGGQVGDCGT-- 527
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
EN V + + + +H +V VD R G HT +
Sbjct: 528 ---LVSENETVTVTDTKRENNQSIH---IVKKLPEDLNAEFMACVDLDKRNGSAANHTAT 581
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL+ AL++VL QK V DFS + + ++ + + VE+ +N +I + +
Sbjct: 582 HLLDYALKQVLGDHVEQKGSYVDDKVLRFDFSHF-QKVTDEEIRQVERIVNAMIRQDLPL 640
Query: 712 DRRHMRASELPFLTHLTVIP--GEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIES 769
D R + + L I GE Y D V ++ S E C G H +TG I
Sbjct: 641 DEH--RDTPIEEAKELGAIALFGEKYGDKVRVVRFGP-----SAEFCGGIHAQSTGRIGF 693
Query: 770 CTVIGYKSYNHGVRSIKCLTGDS 792
+I S GVR I+ LTG +
Sbjct: 694 FKIISESSVAAGVRRIEALTGKA 716
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 65/100 (65%), Gaps = 5/100 (5%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRV-ANSQKCIRVGGKHNDLSFAGRDSY--HHTF 878
D ++ F N+GM Q+K++ LG T P PR A++QKC+RV GKHNDL GRDS HHT
Sbjct: 33 DPTLMFTNAGMNQWKDIILG-TKEPEPRRRADTQKCLRVSGKHNDLEEVGRDSALSHHTM 91
Query: 879 FEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FEMLGNWSF DY+K A MA E+L P D LY T
Sbjct: 92 FEMLGNWSFGDYFKEGAIDMAYEYLVDVLKLDPKD-LYVT 130
>gi|432863774|ref|ZP_20087615.1| alanyl-tRNA synthetase [Escherichia coli KTE146]
gi|431403639|gb|ELG86910.1| alanyl-tRNA synthetase [Escherichia coli KTE146]
Length = 876
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 389/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMEL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A+V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIASV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|82778066|ref|YP_404415.1| alanyl-tRNA synthetase [Shigella dysenteriae Sd197]
gi|123561812|sp|Q32CN1.1|SYA_SHIDS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|81242214|gb|ABB62924.1| alanyl-tRNA synthetase [Shigella dysenteriae Sd197]
Length = 876
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 390/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I +A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQDAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G +++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFVVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|197249925|ref|YP_002147723.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|440764321|ref|ZP_20943350.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440770300|ref|ZP_20949252.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|440773002|ref|ZP_20951903.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|197213628|gb|ACH51025.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|436412130|gb|ELP10074.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|436416901|gb|ELP14802.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|436417367|gb|ELP15262.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
Length = 876
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 255/818 (31%), Positives = 383/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ +K+ +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERKIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G +++ I E A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEVINAEQEAVV--VLDQTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG + L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHIGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V DFS + E + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIRQVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M + + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDLDAARAKGAMALF-GEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|432407726|ref|ZP_19650432.1| alanyl-tRNA synthetase [Escherichia coli KTE28]
gi|430928657|gb|ELC49203.1| alanyl-tRNA synthetase [Escherichia coli KTE28]
Length = 876
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 265/817 (32%), Positives = 389/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G S+D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKSVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L V S KV G + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKL---------AVGSLKV--GDAVQADVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|167550339|ref|ZP_02344096.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205324713|gb|EDZ12552.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
Length = 876
Score = 335 bits (860), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 254/818 (31%), Positives = 383/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G ++++I A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDQTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG L L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHLGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V DFS + E + + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKLSEIREVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M + + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDLDAAKAKGAMALF-GEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|124009945|ref|ZP_01694610.1| alanyl-tRNA synthetase [Microscilla marina ATCC 23134]
gi|123984029|gb|EAY24407.1| alanyl-tRNA synthetase [Microscilla marina ATCC 23134]
Length = 883
Score = 335 bits (860), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 251/808 (31%), Positives = 393/808 (48%), Gaps = 109/808 (13%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ SK+IR FLD+F Q H +V S+P+V D ++ F N+GM QFK+ FLG A R
Sbjct: 1 MDSKTIRQKFLDFFREKQ-HQIVDSAPLVVKNDPTLMFTNAGMNQFKDFFLGTKTAENRR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
VA++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A E LT+
Sbjct: 60 VADTQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIAWAWELLTE-VFE 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
LP DRLY T F G L D+E DIW + + D I + NFWEMG TGPCG
Sbjct: 119 LPKDRLYVTVFEGDKGDSLEPDQEAFDIWKKY-INEDRIIYASKEDNFWEMGETGPCGPC 177
Query: 192 SEIHYDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEIH D++ P L VN D ++EIWN+VFI R++ ++ L ++DT
Sbjct: 178 SEIHIDLRDANEIAKTPGKGL--VNQDDPQVVEIWNLVFIQFNRMANKSLQNLPDKHVDT 235
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+GFERL +Q K S YDTD+F P+++ + KV+G + YG+ +D + R+++D
Sbjct: 236 GMGFERLAMAIQGKKSNYDTDVFQPMIQYLAKVAGTQ-YGK------EEKIDIALRVIAD 288
Query: 306 YSRMITVALADNMFP---DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R I+ A+ D P A +R ++R A+ + + L ++E +
Sbjct: 289 HIRAISFAITDGQLPGNNGAGYVIRRILRRAVRYGYSYLGFNE-PFLHTLVPMLSEQFAE 347
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
V+PE++ + I+ ++E K ++T L G+K
Sbjct: 348 VFPELKQQQAHVSNII--------------IQEEKSFLRT--------------LANGLK 379
Query: 423 YLTKQLA--RDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
L + +A ++ EI+G FTL D YG ++ +A+ L + F+++L + K
Sbjct: 380 LLDEVVAKTKEKQQKEIAGIDVFTLSDRYGFPSDLTNLVASENGLGIDEAGFKEELKKQK 439
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIG-DQ 539
RS+ A + D ++ NS F IG D+
Sbjct: 440 LRSQQDAQKSTGDWIVL--------------------NSGESEF-----------IGYDE 468
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
K +R+ I+++ ++ + T YA +GGQ+ D G E
Sbjct: 469 TSSFTK-VLRYR-------EIEVKKKKQYEIVLETTPFYAESGGQVGDTGSLEF---RAE 517
Query: 600 NGKVEIGELASLEGK--IVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA----HTTSH 653
G V + + + + I+H+ K+ ++VEV A+++ R H+ +H
Sbjct: 518 AGTVTVPVIDTKKENDLIIHYSPKNDFTKIAD--LAQVEVFAQVKEQRRRLTENNHSATH 575
Query: 654 LLNAALRRVLTCTYQKSCRVFSDEC-ALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
L+++ALR+VL ++ + +D DFS + ++ + +A VE+ +N+ I + +D
Sbjct: 576 LVHSALRQVLGQHVEQRGSLVNDVILRFDFS-HNAKMTDEEIAEVERIVNEKIRENIALD 634
Query: 713 -RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
RR + E T + GE Y D V +I + SRE C G HV +TG I
Sbjct: 635 ERRAVPYKEAIESLGATGLFGEKYGDTVRVITFDEN---YSRELCGGCHVPSTGVIGFFK 691
Query: 772 VIGYKSYNHGVRSIKCLTGDSSKAAVEN 799
+I S GVR I+ +T ++ V+N
Sbjct: 692 IITEASVASGVRRIEAVTATKAEEYVQN 719
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ FLG A RVA++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFTNAGMNQFKDFFLGTKTAENRRVADTQKCLRVSGKHNDLEEVGHDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ LP DRLY T
Sbjct: 92 LGNWSFGDYFKKEAIAWAWELLTE-VFELPKDRLYVT 127
>gi|432802880|ref|ZP_20036836.1| alanyl-tRNA synthetase [Escherichia coli KTE84]
gi|431347409|gb|ELG34297.1| alanyl-tRNA synthetase [Escherichia coli KTE84]
Length = 876
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 262/817 (32%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G S+D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKSVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEDIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|170695494|ref|ZP_02886639.1| alanyl-tRNA synthetase [Burkholderia graminis C4D1M]
gi|170139685|gb|EDT07868.1| alanyl-tRNA synthetase [Burkholderia graminis C4D1M]
Length = 890
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 249/813 (30%), Positives = 389/813 (47%), Gaps = 142/813 (17%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG PY R
Sbjct: 17 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAESRPYSR 75
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HHTFFEMLGN+SF DY+KRDA A E LT
Sbjct: 76 ATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTGV-YQ 134
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP D+L+ T + D+E DIW E+GVP + I + G NFW+M
Sbjct: 135 LPKDKLWVTVY--------HEDDEAHDIWAKEVGVPVERIIRIGDNKGARYASDNFWQMA 186
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG SEI YD G P S + D + IEIWN+VF+ R + + PL
Sbjct: 187 DTGPCGPCSEIFYDHGPDVWGGPPGSP----DEDGDRYIEIWNLVFMQFNRDAQGNMTPL 242
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S Y+ DLF L+ + A+ G + T+N
Sbjct: 243 PKQCVDTGMGLERIAAVLQHVHSNYEIDLFQALIN-----AAARETGVSDLTNN------ 291
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELSY 354
S ++++D+ R + + D + P + LR +VR A+ +K+ K+G +
Sbjct: 292 SLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAI---RHGYKLGKKGSFFHRMVA 348
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
++ +G YPE++D+ E R+ D LR Q E F +E
Sbjct: 349 DLVAQMGGAYPELKDA----------EQRVTDVLR-------------QEEERFFETIEH 385
Query: 415 PGLVLGVKYLTKQLAR--DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF 472
G+ L LA + G++AF L+DTYG ++ ++ +++T+ AF
Sbjct: 386 -----GMSILDNALAELDKKGGKTLDGELAFKLHDTYGFPLDLTADVCREREVTVDEAAF 440
Query: 473 EQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
++ + ++R +A+AA K+K + + + TF
Sbjct: 441 DEAM--ARQREQARAAG------------------KFKMAQGLEYSGAKTTFHGY----- 475
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV-- 590
+++ D + GAS+ Q+ H ++ D T YA +GGQ+ D G+
Sbjct: 476 -----EEIVFDDAKVVALYVDGASVQ--QVTHGQQAVVVLDHTPFYAESGGQVGDQGLLA 528
Query: 591 -AYLTNTTQENGKVE---IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCM 646
A + + KV+ +G +LE + G+VV + E+DA R
Sbjct: 529 NASVRFAVADTLKVQADVVGHHGTLEQGTLKVGDVV-----------KAEIDAVRRARTA 577
Query: 647 RAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DV 704
R H+ +HL++ ALR VL + QK V D+ DF+ + ++ + + VE+ +N +V
Sbjct: 578 RNHSATHLMHKALREVLGSHVQQKGSLVDPDKTRFDFA-HNAPMTDEQIRRVEQIVNAEV 636
Query: 705 IANQVQVDRRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+AN + R +PF + + GE Y D+V ++D+ SRE C GTH
Sbjct: 637 LANAPGIVRV------MPFDEAVKGGAMALFGEKYGDEVRVLDLG-----FSRELCGGTH 685
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
V TG I ++ G+R ++ +TGD++
Sbjct: 686 VHRTGDIGLFKIVMEGGVAAGIRRVEAITGDNA 718
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG PY R +Q+ +R GGKHNDL G + HHT
Sbjct: 44 VPGNDPTLLFTNSGMVQFKDVFLGAESRPYSRATTAQRSVRAGGKHNDLENVGYTARHHT 103
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA A E LT LP D+L+ T
Sbjct: 104 FFEMLGNFSFGDYFKRDAIHYAWELLTG-VYQLPKDKLWVT 143
>gi|306812426|ref|ZP_07446624.1| alanyl-tRNA synthetase [Escherichia coli NC101]
gi|416336702|ref|ZP_11673172.1| Alanyl-tRNA synthetase [Escherichia coli WV_060327]
gi|432382394|ref|ZP_19625334.1| alanyl-tRNA synthetase [Escherichia coli KTE15]
gi|432388326|ref|ZP_19631208.1| alanyl-tRNA synthetase [Escherichia coli KTE16]
gi|432514957|ref|ZP_19752178.1| alanyl-tRNA synthetase [Escherichia coli KTE224]
gi|432612675|ref|ZP_19848833.1| alanyl-tRNA synthetase [Escherichia coli KTE72]
gi|432647227|ref|ZP_19883013.1| alanyl-tRNA synthetase [Escherichia coli KTE86]
gi|432656818|ref|ZP_19892519.1| alanyl-tRNA synthetase [Escherichia coli KTE93]
gi|432700086|ref|ZP_19935237.1| alanyl-tRNA synthetase [Escherichia coli KTE169]
gi|432746651|ref|ZP_19981314.1| alanyl-tRNA synthetase [Escherichia coli KTE43]
gi|432906051|ref|ZP_20114779.1| alanyl-tRNA synthetase [Escherichia coli KTE194]
gi|432939131|ref|ZP_20137281.1| alanyl-tRNA synthetase [Escherichia coli KTE183]
gi|432972811|ref|ZP_20161675.1| alanyl-tRNA synthetase [Escherichia coli KTE207]
gi|432986413|ref|ZP_20175131.1| alanyl-tRNA synthetase [Escherichia coli KTE215]
gi|433039657|ref|ZP_20227253.1| alanyl-tRNA synthetase [Escherichia coli KTE113]
gi|433083566|ref|ZP_20270020.1| alanyl-tRNA synthetase [Escherichia coli KTE133]
gi|433102238|ref|ZP_20288315.1| alanyl-tRNA synthetase [Escherichia coli KTE145]
gi|433145255|ref|ZP_20330394.1| alanyl-tRNA synthetase [Escherichia coli KTE168]
gi|433189439|ref|ZP_20373532.1| alanyl-tRNA synthetase [Escherichia coli KTE88]
gi|433199388|ref|ZP_20383281.1| alanyl-tRNA synthetase [Escherichia coli KTE94]
gi|305854464|gb|EFM54902.1| alanyl-tRNA synthetase [Escherichia coli NC101]
gi|320194836|gb|EFW69465.1| Alanyl-tRNA synthetase [Escherichia coli WV_060327]
gi|430904908|gb|ELC26589.1| alanyl-tRNA synthetase [Escherichia coli KTE16]
gi|430906135|gb|ELC27736.1| alanyl-tRNA synthetase [Escherichia coli KTE15]
gi|431040332|gb|ELD50867.1| alanyl-tRNA synthetase [Escherichia coli KTE224]
gi|431146858|gb|ELE48281.1| alanyl-tRNA synthetase [Escherichia coli KTE72]
gi|431178574|gb|ELE78481.1| alanyl-tRNA synthetase [Escherichia coli KTE86]
gi|431189621|gb|ELE89040.1| alanyl-tRNA synthetase [Escherichia coli KTE93]
gi|431242331|gb|ELF36751.1| alanyl-tRNA synthetase [Escherichia coli KTE169]
gi|431290591|gb|ELF81126.1| alanyl-tRNA synthetase [Escherichia coli KTE43]
gi|431430442|gb|ELH12273.1| alanyl-tRNA synthetase [Escherichia coli KTE194]
gi|431462126|gb|ELH42343.1| alanyl-tRNA synthetase [Escherichia coli KTE183]
gi|431480288|gb|ELH60008.1| alanyl-tRNA synthetase [Escherichia coli KTE207]
gi|431498189|gb|ELH77402.1| alanyl-tRNA synthetase [Escherichia coli KTE215]
gi|431550055|gb|ELI24052.1| alanyl-tRNA synthetase [Escherichia coli KTE113]
gi|431600322|gb|ELI69993.1| alanyl-tRNA synthetase [Escherichia coli KTE133]
gi|431617817|gb|ELI86806.1| alanyl-tRNA synthetase [Escherichia coli KTE145]
gi|431660413|gb|ELJ27285.1| alanyl-tRNA synthetase [Escherichia coli KTE168]
gi|431704266|gb|ELJ68894.1| alanyl-tRNA synthetase [Escherichia coli KTE88]
gi|431719689|gb|ELJ83741.1| alanyl-tRNA synthetase [Escherichia coli KTE94]
Length = 876
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 262/817 (32%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G S+D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKSVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|432393137|ref|ZP_19635966.1| alanyl-tRNA synthetase [Escherichia coli KTE21]
gi|430917400|gb|ELC38447.1| alanyl-tRNA synthetase [Escherichia coli KTE21]
Length = 876
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 256/814 (31%), Positives = 387/814 (47%), Gaps = 139/814 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSY 354
S R+++D+ R +AD + P + LR ++R A+ ++F K+ K L
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHG-NMFGAKETFFYK-LVG 336
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
+ +++G +++ +++ +L + E EQF E
Sbjct: 337 PLIDVMGSAGEDLKRQQAQVEQVL------------------------KTEEEQFARTLE 372
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + + FE
Sbjct: 373 RGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEA 427
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCLDTN 530
+ E +R +A+ AS + DY+ D+ S+ + L+ N
Sbjct: 428 AMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHLELN 467
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG- 589
G V +D G ++D+I A V + D+T YA +GGQ+ D G
Sbjct: 468 --GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGDKGE 511
Query: 590 -----VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLG 644
++ TQ+ G+ IG + L + G+ V + +VD R
Sbjct: 512 LKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEARRAR 559
Query: 645 CMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIND 703
H+ +HL++AALR+VL T QK V DFS + E + + + AVE +N
Sbjct: 560 IRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDLVNA 618
Query: 704 VIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFN 763
I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 619 QIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTHASR 673
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 674 TGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|432398599|ref|ZP_19641377.1| alanyl-tRNA synthetase [Escherichia coli KTE25]
gi|432724119|ref|ZP_19959035.1| alanyl-tRNA synthetase [Escherichia coli KTE17]
gi|432728701|ref|ZP_19963577.1| alanyl-tRNA synthetase [Escherichia coli KTE18]
gi|432742385|ref|ZP_19977102.1| alanyl-tRNA synthetase [Escherichia coli KTE23]
gi|432991750|ref|ZP_20180413.1| alanyl-tRNA synthetase [Escherichia coli KTE217]
gi|433111885|ref|ZP_20297744.1| alanyl-tRNA synthetase [Escherichia coli KTE150]
gi|430914177|gb|ELC35280.1| alanyl-tRNA synthetase [Escherichia coli KTE25]
gi|431264373|gb|ELF56087.1| alanyl-tRNA synthetase [Escherichia coli KTE17]
gi|431272266|gb|ELF63373.1| alanyl-tRNA synthetase [Escherichia coli KTE18]
gi|431282618|gb|ELF73497.1| alanyl-tRNA synthetase [Escherichia coli KTE23]
gi|431493892|gb|ELH73483.1| alanyl-tRNA synthetase [Escherichia coli KTE217]
gi|431626921|gb|ELI95333.1| alanyl-tRNA synthetase [Escherichia coli KTE150]
Length = 876
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 260/819 (31%), Positives = 388/819 (47%), Gaps = 149/819 (18%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLV 349
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFCK----- 333
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
L + +++G +++ +++ +L + E EQF
Sbjct: 334 --LVGPLIDVMGSAGEDLKRQQAQVEQVL------------------------KTEEEQF 367
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 368 ARTLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDE 422
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFP 525
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 423 AGFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYD 462
Query: 526 CLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQI 585
L+ N G V +D G S+D+I A V + D+T YA +GGQ+
Sbjct: 463 HLELN--GKVT---ALFVD---------GKSVDAINAGQEAVV--VLDQTPFYAESGGQV 506
Query: 586 DDIG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDA 639
D G ++ TQ+ G+ IG + L V S KV G + +VD
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQA-IGHIGKL---------AVGSLKV--GDAVQADVDE 554
Query: 640 RMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVE 698
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 555 ARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVE 613
Query: 699 KYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCG 758
+N I + ++ M E + GE Y + V ++ + D S E C G
Sbjct: 614 DLVNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGG 668
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TH TG I +I GVR I+ +TG+ + A V
Sbjct: 669 THASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|410478672|ref|YP_006766309.1| alanyl-tRNA synthetase [Leptospirillum ferriphilum ML-04]
gi|406773924|gb|AFS53349.1| alanyl-tRNA synthetase [Leptospirillum ferriphilum ML-04]
Length = 891
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 257/790 (32%), Positives = 379/790 (47%), Gaps = 104/790 (13%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
S +R FL YF N GH +V S+ ++P GD ++ F N+GM FK++FLG R
Sbjct: 3 SWELRQKFLLYF-NGSGHDVVPSASLIPAGDPTLLFTNAGMVPFKDIFLGAEKTTRKRAV 61
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLP 133
+ QKCVR GGKHNDL G HHTFFEM+GN+SF DY+K++A A FLTK L
Sbjct: 62 SIQKCVRAGGKHNDLDRVGFTRRHHTFFEMMGNFSFGDYFKKEAISFAWTFLTK---ELG 118
Query: 134 LDR--LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+DR L+ T + D+E +W E+ V D I + G K NFW+MG TGPCG
Sbjct: 119 MDRRLLWVTVY--------REDDEAERLWREVTDVLPDRIVRLGEKDNFWQMGDTGPCGP 170
Query: 191 SSEIHYDMKGEP---SSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEI D +GE S +V D + +EIWN+VF+ + R + + PL + IDTG+
Sbjct: 171 CSEILVD-QGERFSCGSPDCKVGCDCDRFLEIWNLVFMQYDRNAEGVLSPLPRPSIDTGM 229
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYS 307
G ERL ++Q K S Y+TDLF+PL+ TIE Y R + LD +YR+++D+
Sbjct: 230 GLERLSAVVQKKDSNYETDLFMPLIRTIET------YSRVHYGAGEGSLDHAYRVIADHL 283
Query: 308 RMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVY 364
R L + + P + LR ++R ALL ++ ++ L+ ++AE++ Y
Sbjct: 284 RSSVFLLHEGIAPSNEGRGHVLRRIIRRALLFGRELGLPH--PILPSLAESVAEMMAKPY 341
Query: 365 PEIQDSINKIQLILG-EESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
PE++ S+++IQ +L EE R L PLV+ E +E+
Sbjct: 342 PELRTSLSRIQDVLRLEEGRFHQTLESGL-----PLVQ-----EMLRTLEK--------- 382
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
KQ P G+M F L+DT+G +I+++ A + + L ++ FE+K+ E +ER
Sbjct: 383 --KQEKVFP------GEMLFLLHDTHGFPLDIVEDAAKMQGILLDYKGFEEKMEEQRERG 434
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
++ D FP+ DK K + K T++ G V+ F +
Sbjct: 435 RSSWTGKKED--------FPLPSDKLKKSVEFQGYEK--------TSMQGTVL----FLL 474
Query: 544 D-KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
+ K ++ +G S V ++ DKT Y V + + G
Sbjct: 475 NGKEEVKEVHAGES-----------VLVVLDKTVFYPEG-----GGQVGDVGDLIGPFGY 518
Query: 603 VEI-GELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRR 661
+ + G G IV G VVS KV+ G T VD R G R HT +HLL+AALR
Sbjct: 519 IRVRGAKKPYPGWIVLSGEVVSG-KVSVGETIDQHVDEEARQGSERHHTATHLLHAALRT 577
Query: 662 VL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASE 720
VL Q V + DF+ +S +++ AVE +N I VD M S+
Sbjct: 578 VLGEQVRQAGSLVAPERLRFDFTCP-HPVSPENLLAVEALVNGWIFRNSPVDASEMEKSK 636
Query: 721 LPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNH 780
+ L E Y D V ++ + S E C GTHV +TG I S ++
Sbjct: 637 ALDMGALAFFD-EKYGDRVRVVQVPG----TSVELCGGTHVRSTGQIGSLLILQETGVAA 691
Query: 781 GVRSIKCLTG 790
G+R I+ + G
Sbjct: 692 GIRRIEAVAG 701
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP GD ++ F N+GM FK++FLG R + QKC+R GGKHNDL G HHT
Sbjct: 28 IPAGDPTLLFTNAGMVPFKDIFLGAEKTTRKRAVSIQKCVRAGGKHNDLDRVGFTRRHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 914
FFEM+GN+SF DY+K++A A FLTK L +DR
Sbjct: 88 FFEMMGNFSFGDYFKKEAISFAWTFLTK---ELGMDR 121
>gi|344199958|ref|YP_004784284.1| alanyl-tRNA synthetase [Acidithiobacillus ferrivorans SS3]
gi|343775402|gb|AEM47958.1| alanyl-tRNA synthetase [Acidithiobacillus ferrivorans SS3]
Length = 878
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 250/817 (30%), Positives = 382/817 (46%), Gaps = 118/817 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ +++IR +FL+YF QGH +V SSP++P D ++ F N+GM FK+VFLGL PY R
Sbjct: 1 MHAQAIRQAFLEYFVE-QGHQIVPSSPLIPRNDPTLLFTNAGMVPFKDVFLGLETRPYRR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+C+R GGKHNDL G + HHTFFEMLGN+SF DY+KR+ A FLT+ +
Sbjct: 60 AVSSQRCMRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREVIGFAWRFLTE-RLD 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L+ T + D+E DIW+ E+G+ + + G K NFW MG TGPCG
Sbjct: 119 LPPEKLWITVY--------EEDDEAADIWINEIGIDPARLSRCGEKDNFWSMGDTGPCGP 170
Query: 191 SSEIHYDMKGEPSSALARV-NADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
SEI YD AD + IEIWN+VF+ R S+ T+ L K +DTG+G
Sbjct: 171 CSEIFYDHGPHIPGGPPGSPEADGDRYIEIWNLVFMQFDRDSSGTLTHLPKPSVDTGMGL 230
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ERL +LQ + YDTDLF PL+ +SG K YG T DTS R+L+D+ R
Sbjct: 231 ERLAAVLQGVHNNYDTDLFKPLIAAAASISG-KTYGSDTAT------DTSLRVLADHIRA 283
Query: 310 ITVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLVKELSYNIAEILG 361
+ + D + P + LR ++R A+ L E+VF +L + +G
Sbjct: 284 CSFLITDGVLPANEGRGYVLRRIIRRAVRHGRKLGMENVF-------FHQLVAPLVAEMG 336
Query: 362 DVYPEIQDSINKIQLILG-EESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
+PE+ + +++ L EE+R + L + G
Sbjct: 337 SAFPELTRAQREVERALEREETRFRETLER-----------------------------G 367
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
+ L + +A + I G++ F L DT+G ++ ++A + L + E +E + E +
Sbjct: 368 LSLLEEAIAGLAAGAAIPGEIIFRLADTFGFPVDLTADIARERDLVMDMEGYEAAMAEQR 427
Query: 481 ERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYT--FPCLDTNLVGIVIGD 538
RS+A A + V ++ +D + +T C D V +I
Sbjct: 428 SRSRAAWAGS-----------GEVKTERVYHDLAMRLPTTVFTGYTACADEGKVLALI-- 474
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG------VAY 592
R G + LE +I D+T Y +GGQ D G +
Sbjct: 475 -------------RDGEEVAF--LEAGDAGAVILDRTPFYGESGGQAGDRGELQSDSALF 519
Query: 593 LTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
TQ+ +G L VH G++ SS ++ G VD R H+ +
Sbjct: 520 AVRDTQK----PLGHLH------VHLGHLTSS-RLQVGDVVLASVDEVGRRATAAHHSAT 568
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL+AALR VL + QK V + DFS E ++ + +E+ +N I N V
Sbjct: 569 HLLHAALRNVLGSHVQQKGSLVNPERLRFDFS-QPEPVTAAQLREIERVVNAAIRNNVGA 627
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
+ R + +E L + + GE Y D+V ++ + D S E C GTHV G +
Sbjct: 628 ETRVLPVAEAQALGAMALF-GEKYGDEVRVVRMGD----FSMELCGGTHVEALGDMGVFK 682
Query: 772 VIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAAS 808
++ G+R I+ + G + A++ + AA+
Sbjct: 683 ILSESGVAAGIRRIEAVAGAVALEAIQRDEERLQAAA 719
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM FK+VFLGL PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 28 IPRNDPTLLFTNAGMVPFKDVFLGLETRPYRRAVSSQRCMRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KR+ A FLT+ + LP ++L+ T
Sbjct: 88 FFEMLGNFSFGDYFKREVIGFAWRFLTE-RLDLPPEKLWIT 127
>gi|295677107|ref|YP_003605631.1| alanyl-tRNA synthetase [Burkholderia sp. CCGE1002]
gi|295436950|gb|ADG16120.1| alanyl-tRNA synthetase [Burkholderia sp. CCGE1002]
Length = 874
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 243/802 (30%), Positives = 386/802 (48%), Gaps = 120/802 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG PY R
Sbjct: 1 MKAADIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAESRPYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HHTFFEMLGN+SF DY+KRDA A E LT+
Sbjct: 60 ATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTEV-YK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP D+L+ T + D+E DIW E+GVP + I + G NFW+M
Sbjct: 119 LPKDKLWVTVY--------QEDDEAHDIWAKEVGVPVERIIRIGDNKGARYASDNFWQMA 170
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG SEI YD G P S D + IEIWN+VF+ R + + PL
Sbjct: 171 DTGPCGPCSEIFYDHGPDVWGGPPGSP----EEDGDRYIEIWNLVFMQFNRDAQGNMTPL 226
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S Y+ DLF L++ + +G TDL +
Sbjct: 227 PKQCVDTGMGLERIAAVLQHVHSNYEIDLFQALIQAAGRETGV------------TDLTN 274
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELS 353
S ++++D+ R + + D + P + LR +VR A+ +K+ K+G L
Sbjct: 275 NSLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAI---RHGYKLGKKGSFFHRLV 331
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
++ +GD YPE+ + E R+ D LR+ E E+F
Sbjct: 332 ADLVAQMGDAYPELAQA----------EKRVTDVLRQ--------------EEERFFETI 367
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
E G+ + L A+ + G++AF L+DTYG ++ ++ +++T+ AF+
Sbjct: 368 EHGMSILEAALADLDAKGGKT--LDGELAFKLHDTYGFPLDLTADVCREREVTVDEPAFD 425
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
+ ++R +A+AA K+K + + + TF
Sbjct: 426 DAM--ARQREQARAAG------------------KFKMAQGLEYSGAKTTFHGY------ 459
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
+++ D + GAS+ +Q A V + D T YA +GGQ+ D GV L
Sbjct: 460 ----EEIVFDDAKVVALYVDGASVQQVQAGQPAVV--VLDHTPFYAESGGQVGDQGV--L 511
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
N + + + + ++ +V + + G + E+DA R R H+ +H
Sbjct: 512 ANAST---RFAVADTLKVQADVVGHHGTLEQGTLKVGDVVKAEIDAVRRARTARNHSATH 568
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIANQVQV 711
L++ ALR VL + QK V +D+ DF+ + ++ + + VE+ +N +V+AN +
Sbjct: 569 LMHKALREVLGSHVQQKGSLVDADKTRFDFA-HNAPMTDEQIRRVEEIVNAEVLANAPGI 627
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
R + + + + GE Y D+V ++D+ SRE C GTHV +G I
Sbjct: 628 VR--LMSYDDAVKGGAMALFGEKYGDEVRVLDLG-----FSRELCGGTHVNRSGDIGFFK 680
Query: 772 VIGYKSYNHGVRSIKCLTGDSS 793
++ G+R ++ +TGD++
Sbjct: 681 IVMEGGVAAGIRRVEAITGDNA 702
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG PY R +Q+ +R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLLFTNSGMVQFKDVFLGAESRPYSRATTAQRSVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA A E LT+ LP D+L+ T
Sbjct: 88 FFEMLGNFSFGDYFKRDAIHYAWELLTE-VYKLPKDKLWVT 127
>gi|254245667|ref|ZP_04938988.1| Alanyl-tRNA synthetase, class IIc [Burkholderia cenocepacia PC184]
gi|124870443|gb|EAY62159.1| Alanyl-tRNA synthetase, class IIc [Burkholderia cenocepacia PC184]
Length = 897
Score = 335 bits (858), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 241/805 (29%), Positives = 387/805 (48%), Gaps = 126/805 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG P PY R
Sbjct: 24 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSR 82
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT
Sbjct: 83 ATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLT-TVYQ 141
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP D+L+ T + D+E DIW E+GVP + I + G NFW MG
Sbjct: 142 LPKDKLWVTVY--------QEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMG 193
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWN+VF+ R + + L
Sbjct: 194 DTGPCGPCTEIFYDHGPDVWGGPPGSP----EEDGDRYIEIWNLVFMQFNRDAQGNMTRL 249
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ERL +LQ+ S Y+ DLF L+ K R S+ T+
Sbjct: 250 PKQSVDTGMGLERLAAVLQHVHSNYEIDLFQNLI---------KAAARVTEISDLTN--N 298
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELSY 354
S ++++D+ R + + D + P + LR +VR A+ +K+ ++G +L
Sbjct: 299 SLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHG---YKLGRKGAFFHKLVA 355
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
++ +G YPE++++ E R+ D LR+ E E+F E
Sbjct: 356 DLVAEMGTAYPELKEA----------EQRVTDVLRQ--------------EEERFFETIE 391
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
G+ + L A+ + + G++AF L+DTYG ++ ++ + +T+ AF+
Sbjct: 392 HGMSILEAALADVEAKGGKV--LDGELAFKLHDTYGFPLDLTADVCRERGMTVDEPAFDD 449
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ ++R +A+AA K+K + + + TF
Sbjct: 450 AM--ARQREQARAAG------------------KFKATQGLEYSGAKTTFHGY------- 482
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+++ D + G++++ ++ +A V + D T YA +GGQ+ D GV L
Sbjct: 483 ---EEIAFDDAKVVALYVDGSAVNEVKAGQDAVV--VLDHTPFYAESGGQVGDQGV--LA 535
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
N + + + ++ ++ + + G R E+DA+ R R H+ +HL
Sbjct: 536 NAAT---RFAVADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHL 592
Query: 655 LNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIND-VIANQVQVD 712
++ ALR VL QK V +D+ DF+ + ++ D + VE+ +ND ++AN +
Sbjct: 593 MHKALREVLGAHVQQKGSLVDADKTRFDFA-HNAPMTDDEIRRVEQIVNDEILANAPGIV 651
Query: 713 RRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIE 768
R +P+ + + GE Y D+V ++D+ SRE C GTHV TG I
Sbjct: 652 RV------MPYDEAVKGGAMALFGEKYGDEVRVLDLG-----FSRELCGGTHVHRTGDIG 700
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSS 793
++ G+R ++ +TGD++
Sbjct: 701 LFKIVVEGGVAAGIRRVEAITGDNA 725
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG P PY R +Q+ +R GGKHNDL G + HHT
Sbjct: 51 VPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQRSVRAGGKHNDLENVGYTARHHT 110
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT LP D+L+ T
Sbjct: 111 FFEMLGNFSFGDYFKHDAIKFAWELLT-TVYQLPKDKLWVT 150
>gi|150396732|ref|YP_001327199.1| alanyl-tRNA synthetase [Sinorhizobium medicae WSM419]
gi|205830211|sp|A6U9N4.1|SYA_SINMW RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|150028247|gb|ABR60364.1| alanyl-tRNA synthetase [Sinorhizobium medicae WSM419]
Length = 887
Score = 335 bits (858), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 249/798 (31%), Positives = 371/798 (46%), Gaps = 108/798 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS FLDYF GH +V SSP+VP D ++ F N+GM QFKNVF GL PY A +Q
Sbjct: 7 IRSMFLDYF-RKNGHEVVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEQRPYSTAATAQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K A +A +TK L R
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKERAIELAWNLITK-EYGLDAKR 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
L T + D+E +W ++ G+ D I + NFW MG TGPCG SEI
Sbjct: 125 LLVTVY--------HTDDEAFGLWKKIAGLSDDRIIRIATSDNFWAMGDTGPCGPCSEIF 176
Query: 196 YD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
YD G P SA + D + IEIWN+VF+ +++++ + V L + IDTG+G E
Sbjct: 177 YDHGDHIWGGPPGSA----DEDGDRFIEIWNLVFMQYEQITKEERVDLPRPSIDTGMGLE 232
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RL +LQ + YD DLF L+ E+ +G K G D S+R+++D+ R
Sbjct: 233 RLAAVLQGQHDNYDIDLFRALIAASEEATGVKAEG---------DRRASHRVIADHLRSS 283
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+AD + P + LR ++R A+ ++ Q L+ +L + +G YPE+
Sbjct: 284 AFLIADGVLPSNEGRGYVLRRIMRRAMRHAQ--LLGAQDPLMWKLLPALVGQMGRAYPEL 341
Query: 368 QDSINKIQLILG-EESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ I L EE+R L + N++EE L
Sbjct: 342 VRAEALISETLKLEETRFRKTLERG-----------------LNLLEEASADL------- 377
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
+ +G+ AF LYDTYG ++ Q+ AK + + +AF + +++++A+
Sbjct: 378 -----SEGDQFNGETAFKLYDTYGFPLDLTQDALRAKGIGVDTDAFTAAMQ--RQKAEAR 430
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A + F + D D+ YDT S G++ Q D
Sbjct: 431 ANWTGSGDAATETIWFELRDKHGATDFLGYDTESAE-----------GVI---QAIVRDG 476
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
+ A G ++ L+ ++T Y +GGQ+ D GV T E+GK+ +
Sbjct: 477 TVVESASKGETVQ-----------LVLNQTPFYGESGGQVGDTGV-----VTTESGKLTV 520
Query: 606 GELASL-EGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL- 663
+ EG VH+ VV V G + + VD R H+ +HLL+ ALR VL
Sbjct: 521 TDTQKRGEGLFVHY-CVVEEGSVKTGEAAALAVDHARRTRLRANHSATHLLHEALREVLG 579
Query: 664 TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPF 723
T QK V + D S + + ++ + + VE+ N++I V R M +
Sbjct: 580 THVSQKGSLVAPERLRFDVS-HPKPMTSEELKVVEEMANEIIVQNTPVVTRLMSVDD-AI 637
Query: 724 LTHLTVIPGEIYPDDVILIDI------SDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
+ GE Y D+V ++ + S S E C GTHV TG I ++ +
Sbjct: 638 AEGAMALFGEKYGDEVRVVSMGQGLHGSKAGKAYSVELCGGTHVSATGDIGLVRIVSESA 697
Query: 778 YNHGVRSIKCLTGDSSKA 795
GVR ++ LTG++++A
Sbjct: 698 VGSGVRRVEALTGEAARA 715
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFKNVF GL PY A +QKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFTNAGMVQFKNVFTGLEQRPYSTAATAQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K A +A +TK L RL T
Sbjct: 89 FFEMLGNFSFGDYFKERAIELAWNLITK-EYGLDAKRLLVT 128
>gi|357473871|ref|XP_003607220.1| Alanyl-tRNA synthetase [Medicago truncatula]
gi|355508275|gb|AES89417.1| Alanyl-tRNA synthetase [Medicago truncatula]
Length = 635
Score = 335 bits (858), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 188/491 (38%), Positives = 276/491 (56%), Gaps = 44/491 (8%)
Query: 10 VRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP--- 66
+ +K +R +F +F + H KSS +VP D ++ F N+GM QFK +FLG
Sbjct: 9 IEWPAKRVRDTFAKFF-EEKNHVHWKSSAVVPLNDPTLLFANAGMNQFKPIFLGTVDPNT 67
Query: 67 --APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEF 124
+ R N QKC+R GGKHNDL G+D+YHHTFFEMLGNWSF DY+K +A A E
Sbjct: 68 ALSKLTRACNIQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEAISWAWEL 127
Query: 125 LTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGS 184
LT+ +LP DR+Y TYFGG ++ GL D E RDIWL+ +P + G K NFWEMG
Sbjct: 128 LTEV-YNLPSDRIYVTYFGGDEKTGLGPDNEARDIWLKF-LPPGRVLPFGSKDNFWEMGD 185
Query: 185 TGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
TGPCG SEIH+D G +A + VN + + IE+WN+VFI R + ++ L ++D
Sbjct: 186 TGPCGPCSEIHFDRIGN-RNASSFVNDEDPNCIELWNLVFIQFNREADGSLKSLPAKHVD 244
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLS 304
TG+GFERL +ILQ+K S YDTD+F+P+ + I++ +GA+PY + +D +YR+++
Sbjct: 245 TGMGFERLTSILQHKNSNYDTDVFVPIFDAIQQATGARPYSGKVGPHDADKVDMAYRVVA 304
Query: 305 DYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILG 361
D+ R +++A+AD P + LR ++R A+ +V K ++G L +A +LG
Sbjct: 305 DHIRTLSIAIADGSQPGNVGREYVLRRILRRAVRYGREVLKAEEG-FFNGLVNVVANVLG 363
Query: 362 DVYPEIQDSINKI-QLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLG 420
DV+PE++ + +I ++I EE NL K K K + E Q NI+
Sbjct: 364 DVFPELKQNEERIRKMIQVEEESFSRNLFKGIRKFNKAV-----EHVQGNIL-------- 410
Query: 421 VKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELK 480
SG++AF L T+G ++ Q +A KK ++ E F + + +
Sbjct: 411 -----------------SGEVAFELSHTFGFPLDLTQLMAEEKKFSVDIEGFHRAMKAAR 453
Query: 481 ERSKAKAASNV 491
ERSK V
Sbjct: 454 ERSKTAPKKKV 464
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
+P D ++ F N+GM QFK +FLG + R N QKCIR GGKHNDL G+D
Sbjct: 38 VPLNDPTLLFANAGMNQFKPIFLGTVDPNTALSKLTRACNIQKCIRAGGKHNDLDDVGKD 97
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
+YHHTFFEMLGNWSF DY+K +A A E LT+ +LP DR+Y T+
Sbjct: 98 TYHHTFFEMLGNWSFGDYFKEEAISWAWELLTE-VYNLPSDRIYVTY 143
>gi|307256675|ref|ZP_07538454.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
str. D13039]
gi|306864723|gb|EFM96627.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
str. D13039]
Length = 874
Score = 335 bits (858), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 263/830 (31%), Positives = 394/830 (47%), Gaps = 146/830 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR SFLD+F +++GHT+V SS +VP D ++ F N+GM QFK+VFLGL PY R
Sbjct: 3 TTSEIRQSFLDFF-HSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEM+GN+SF DY+K DA + E+LT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEG-------MKCNFWEMG 183
LP ++LY T + D+E DIW ++ GVP DHI + G NFW MG
Sbjct: 122 LPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMG 173
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IE+WNIVF+ R++ T+ L
Sbjct: 174 DTGPCGPCTEIFYDHGETFWGGLPGSP----EEDGDRYIEVWNIVFMQFNRLADGTMEKL 229
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ ++Q+ S Y+TD+F L I++V+G N +DLD
Sbjct: 230 PKPSVDTGMGLERMTAVMQHVNSNYETDIFQTL---IKEVAG---------LLNVSDLDN 277
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLV 349
S R+++D+ R + +AD + P + LR ++R A LL +++ F K +
Sbjct: 278 KSLRVVADHIRACSYLIADGVVPSNEGRGYVLRRIIRRAVRHGNLLGAKEAFFYKLVPTL 337
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
+ + E+L IQ ++ + E EQF
Sbjct: 338 ATVMGHAGEVLTQKQAHIQKTL-------------------------------KAEEEQF 366
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L LTK +SG++AF LYDTYG ++ ++ ++LT+
Sbjct: 367 ARTLERGLALLEDALTK-----VENNTLSGEVAFKLYDTYGFPLDLTADVCRERELTIDE 421
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
FE ++ +ER AKA+SN D + + + + YD + T L +
Sbjct: 422 AGFEAEMTAQRER--AKASSNFG----TDYNNVIKVEGQTDF-IGYDNLEAQATIVGLFS 474
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
N G ++D+IQ +A + I D+T YA GGQ+ D G
Sbjct: 475 N-----------------------GKAVDTIQSGESAVI--ILDQTPFYAEMGGQVGDSG 509
Query: 590 VA------YLTNTTQENGKV--EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
+ + N TQ+ G+V IG+L S G++ KVT V A
Sbjct: 510 LISTEICNFAVNDTQKYGQVFGHIGQLTS--------GSLSIGDKVTA------TVHATR 555
Query: 642 RLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R+ H+ +HLL++ALR VL QK V + DFS E +S + +E+
Sbjct: 556 RIAITANHSATHLLHSALREVLGDHVAQKGSLVSENILRFDFS-QPEAISKSQLEEIERI 614
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I +QV M + + GE Y D V ++ +++ S E C GTH
Sbjct: 615 VNRKIRKNIQVTIETMDIESAKKKGAMALF-GEKYGDVVRVVGMTE----FSIELCGGTH 669
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN-GKHLSTAASF 809
V TG I ++ + G+R ++ +T +++ + N K L +A F
Sbjct: 670 VQRTGDIGLFKLVSEGAVAAGIRRVEAVTAETAIEWLHNQQKVLQQSAEF 719
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL PY R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+K DA + E+LT P + LP ++LY T
Sbjct: 89 FFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEKLYVT 130
>gi|291279844|ref|YP_003496679.1| alanyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
gi|290754546|dbj|BAI80923.1| alanyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
Length = 871
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 252/829 (30%), Positives = 399/829 (48%), Gaps = 121/829 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ K IR FL YF ++GHT V SS +VP+ D ++ F N+GM QFK+VFLG Y R
Sbjct: 1 MTGKEIREKFLKYF-ESKGHTRVPSSSLVPHNDPTLLFTNAGMNQFKDVFLGREKRDYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+ QK VR GGKHNDL GR + HHTFFEMLGN+SF DY+K++A A EFLTK ++
Sbjct: 60 ACSCQKVVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIEYAWEFLTK-EIN 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLE-LGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP D+LY T + D+E +IW + +GVP D I + K NFW MG TGPCG
Sbjct: 119 LPADKLYITVYKD--------DDEAFEIWNKHIGVPADRIYRMDEKDNFWAMGDTGPCGP 170
Query: 191 SSEIHYDMKGEPSSALARVN--ADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
SEI D E A + D + +E+WN+VF+ + R + + PL K IDTG+G
Sbjct: 171 CSEILIDQGPEIGCGRADCDPYCDCDRHLELWNLVFMQYNRDESGKLNPLPKPSIDTGMG 230
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
ER+ ++Q S +DTDL P++E K+S K YG N D DTS R+++D++R
Sbjct: 231 LERVTAVVQKVPSNFDTDLIKPIIEYAAKLSN-KNYG-----DNEKD-DTSLRVIADHAR 283
Query: 309 MITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KELSYNIAE---- 358
T ++D + P + LR ++R A+ + GK++ + Y + E
Sbjct: 284 ATTFLISDGVLPSNEGRGYVLRRIMRRAM---------RHGKMLGFKESFFYQVCEFVCD 334
Query: 359 ILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
+ D Y E+ D + + ++ + E E+FN E GL
Sbjct: 335 FMNDPYIELMDKKSYVSKVV------------------------KFEEERFNKTLETGLK 370
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
+ + L K EI G F LYDTYG +++Q++ L F++++ +
Sbjct: 371 IAEELLEKYKEN----KEIPGFEIFRLYDTYGFPVDLLQDIMEDNGYKLDLVGFDEEMKK 426
Query: 479 LKERSK----AKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ER+K S + DI + ++++K ++ N+K +++++ I
Sbjct: 427 QQERAKNAWAGSGESFIADI-------YKKLENQFKTEFIGYENTKS------ESSVLAI 473
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
V D ++ ++ ++ LI DKT Y +GGQ+ D G Y
Sbjct: 474 VKDDN------------------ETQEISESSEFELILDKTPFYPESGGQVGDTGKIY-- 513
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
EN +E+ + + IVH ++S K+ G +D R R HT +HL
Sbjct: 514 ---NENCNIEVLDCKKVGNLIVHKSKLLSG-KIKKGDKVTAVIDVEKRKNTERNHTATHL 569
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
L+ AL+ VL Q V D DF+ + + + + +E +N+ I ++V
Sbjct: 570 LHKALQMVLGDHVRQAGSLVAPDRLRFDFTHFA-PVDDEEIKKIELLVNENIIKNIEV-T 627
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
+ ++ E + GE Y +V ++++ S+E C G HV TG I ++
Sbjct: 628 KTIKPIEEAIKEGAMALFGEKYDKEVRVVEVPG----FSKELCGGCHVGRTGDIGIFKIV 683
Query: 774 GYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQIL---NVGNIP 819
S G+R I+ +TG AV+ + +++ A S +L N+ ++P
Sbjct: 684 SEASVAAGIRRIEAVTG---LEAVKFTQEINSIAKKSALLLKSNINDVP 729
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLG Y R + QK +R GGKHNDL GR + HHT
Sbjct: 28 VPHNDPTLLFTNAGMNQFKDVFLGREKRDYTRACSCQKVVRAGGKHNDLENVGRTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K++A A EFLTK ++LP D+LY T
Sbjct: 88 FFEMLGNFSFGDYFKKEAIEYAWEFLTK-EINLPADKLYIT 127
>gi|253702326|ref|YP_003023515.1| alanyl-tRNA synthetase [Geobacter sp. M21]
gi|251777176|gb|ACT19757.1| alanyl-tRNA synthetase [Geobacter sp. M21]
Length = 875
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 260/809 (32%), Positives = 374/809 (46%), Gaps = 121/809 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ K IR+ F ++F +GH LV+SS ++P D ++ F N+GM QFK+VFLG+ Y R
Sbjct: 1 MTGKEIRAQFFNFF-QKKGHALVESSNLIPRNDPTLLFTNAGMNQFKDVFLGMEKREYLR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQKCVR GGKHNDL GR + HHTFFEMLGN+SF DY+K++A A EFLTK +
Sbjct: 60 AVSSQKCVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIGFAWEFLTKE-LG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
L DRLY T + D+E DIW + GVPR+ I + G K NFW MG TGPCG
Sbjct: 119 LSKDRLYVTVY--------TDDDEAADIWHNQEGVPRERIYRFGEKDNFWSMGDTGPCGP 170
Query: 191 SSEIHYDMK-----GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
+EI +D G P A V D + +EIWN VF+ R + PL K +DT
Sbjct: 171 CTEIFWDNGPGTGCGSPDCA---VGCDCDRYMEIWNNVFMQFNRGKDGVLAPLPKPSVDT 227
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ++Q TS YDTDL ++ IEKVSG K + R D+ S R+++D
Sbjct: 228 GMGLERISAVMQGVTSNYDTDLLQGIIRHIEKVSGKK-----YRDDERDDV--SMRVIAD 280
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDA------LLISEDV-FKVKQGKLVKELSYN 355
++R +T + D + P + LR ++R A L I+E V F+V
Sbjct: 281 HARAVTFLICDGVLPSNEGRGYVLRRIMRRAARHAKMLGIAEPVLFRVVDA--------- 331
Query: 356 IAEILGDVYPEIQDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
+ ++ D YPE+ + ++ +IL EE R + L + I+ E
Sbjct: 332 VNMMMSDAYPELLEREQYVKKVILAEEERFIETLDRG-----------------LAILNE 374
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF-- 472
L R ISG++ F LYDT+G ++ ++ ++ TL + F
Sbjct: 375 ETAAL----------RAKGEKVISGEIIFKLYDTFGFPVDLTADIVESEGFTLDEDGFAL 424
Query: 473 --EQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
E++ + +E K + DI +L +T D Y S++ F +
Sbjct: 425 CMEKQRVKARENWKGSGEQGLADI-YKELHGTGITTDFLGY-------SEQTAFSTISAI 476
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV 590
+ G + ++ ++ I A T Y +GGQ D G
Sbjct: 477 VKGGTLVEEAGAGEEVEIVTA----------------------ATPFYGESGGQAGDTG- 513
Query: 591 AYLTNTTQENGKVEI-GELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAH 649
+ +G VE+ G IVH G VVS V G + +++ R R H
Sbjct: 514 ----TISTGSGHVEVTGSTRPFTDLIVHRGRVVSG-AVRTGEAADLKITVAHRAATARNH 568
Query: 650 TTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQ 708
T +HLL AALR VL Q V D DF+ + ++ + + VE +N I
Sbjct: 569 TATHLLQAALREVLGEHVKQAGSLVTPDRLRFDFTHF-TPMTQEEIRRVEILVNGHIMGN 627
Query: 709 VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIE 768
V+ R M A++ T + GE Y D V K +S E C GTHV G I
Sbjct: 628 SPVEAREMPATD-ALAAGATALFGEKYGDVV----RVVKVGEVSSELCGGTHVHGAGEIG 682
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
+I GVR I+ TG + A V
Sbjct: 683 FFKIISEAGIAAGVRRIEAQTGSGALAVV 711
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG+ Y R +SQKC+R GGKHNDL GR + HHT
Sbjct: 28 IPRNDPTLLFTNAGMNQFKDVFLGMEKREYLRAVSSQKCVRAGGKHNDLENVGRTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K++A A EFLTK + L DRLY T
Sbjct: 88 FFEMLGNFSFGDYFKKEAIGFAWEFLTK-ELGLSKDRLYVT 127
>gi|293415946|ref|ZP_06658586.1| alanyl-tRNA synthetase [Escherichia coli B185]
gi|331684309|ref|ZP_08384901.1| alanine--tRNA ligase [Escherichia coli H299]
gi|422817812|ref|ZP_16866025.1| alanyl-tRNA synthetase [Escherichia coli M919]
gi|432450826|ref|ZP_19693086.1| alanyl-tRNA synthetase [Escherichia coli KTE193]
gi|432948665|ref|ZP_20143670.1| alanyl-tRNA synthetase [Escherichia coli KTE196]
gi|433034510|ref|ZP_20222215.1| alanyl-tRNA synthetase [Escherichia coli KTE112]
gi|433044222|ref|ZP_20231712.1| alanyl-tRNA synthetase [Escherichia coli KTE117]
gi|450191795|ref|ZP_21891343.1| alanyl-tRNA ligase [Escherichia coli SEPT362]
gi|291432135|gb|EFF05117.1| alanyl-tRNA synthetase [Escherichia coli B185]
gi|331077924|gb|EGI49130.1| alanine--tRNA ligase [Escherichia coli H299]
gi|385538325|gb|EIF85187.1| alanyl-tRNA synthetase [Escherichia coli M919]
gi|430978760|gb|ELC95561.1| alanyl-tRNA synthetase [Escherichia coli KTE193]
gi|431455944|gb|ELH36295.1| alanyl-tRNA synthetase [Escherichia coli KTE196]
gi|431549148|gb|ELI23236.1| alanyl-tRNA synthetase [Escherichia coli KTE112]
gi|431554917|gb|ELI28782.1| alanyl-tRNA synthetase [Escherichia coli KTE117]
gi|449319042|gb|EMD09098.1| alanyl-tRNA ligase [Escherichia coli SEPT362]
Length = 876
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 389/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G +++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFVVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|423141317|ref|ZP_17128955.1| alanyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379050489|gb|EHY68381.1| alanyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
Length = 876
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 253/815 (31%), Positives = 382/815 (46%), Gaps = 141/815 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S Y+ DLF L+E + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYEIDLFRTLIEAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLV 349
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 279 KSLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK----- 333
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
L + E++G E++ +++ +L + E EQF
Sbjct: 334 --LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQF 367
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 368 ARTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDE 422
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
FE + E + R++ D F Y D+ S+ + L+
Sbjct: 423 AGFEAAMEEQRRRAR-------------DASGFGA---DYNAMIRVDSASEFKGYDHLEL 466
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD-- 587
N G V +D G ++++I A V + D+T YA +GGQ+ D
Sbjct: 467 N--GKVT---ALFVD---------GKAVEAIDAGQEAVV--VLDQTPFYAESGGQVGDKG 510
Query: 588 ----IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRL 643
G + + TQ+ G+ IG L L + G+ V + +VD R
Sbjct: 511 ELKGAGFTFAVDDTQKYGQA-IGHLGKLSAGALQVGDAVQA-----------DVDEARRA 558
Query: 644 GCMRAHTTSHLLNAALRRVLTCTYQKSCRVFSDEC-ALDFSVYGETLSVDSVAAVEKYIN 702
H+ +HL++AALR+VL + + SD+ DFS + E + + VE +N
Sbjct: 559 RIRLNHSATHLMHAALRQVLGAHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIREVEDLVN 617
Query: 703 DVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVF 762
I + ++ H+ E + GE Y + V ++ + D S E C GTH
Sbjct: 618 AQIRRNLPIE-THIMDLEAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTHAT 672
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 673 RTGDIGLFRIISESGTAAGVRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|170732737|ref|YP_001764684.1| alanyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
gi|205830047|sp|B1K026.1|SYA_BURCC RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|169815979|gb|ACA90562.1| alanyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
Length = 874
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 241/800 (30%), Positives = 382/800 (47%), Gaps = 116/800 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG P PY R
Sbjct: 1 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT
Sbjct: 60 ATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLT-TVYQ 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP D+L+ T + D+E DIW E+GVP + I + G NFW MG
Sbjct: 119 LPKDKLWVTVY--------QEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMG 170
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWN+VF+ R + + L
Sbjct: 171 DTGPCGPCTEIFYDHGPDVWGGPPGSP----EEDGDRYIEIWNLVFMQFNRDAQGNMTRL 226
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ERL +LQ+ S Y+ DLF L+ K R S+ T+
Sbjct: 227 PKQSVDTGMGLERLAAVLQHVHSNYEIDLFQNLI---------KAAARVTEISDLTN--N 275
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELSY 354
S ++++D+ R + + D + P + LR +VR A+ +K+ ++G +L
Sbjct: 276 SLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHG---YKLGRKGAFFHKLVA 332
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
++ +G YPE++++ E R+ D LR+ E E+F E
Sbjct: 333 DLVAEMGTAYPELKEA----------EQRVTDVLRQ--------------EEERFFETIE 368
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
G+ + L A+ + + G++AF L+DTYG ++ ++ + +T+ AF+
Sbjct: 369 HGMSILEAALADVEAKGGKV--LDGELAFKLHDTYGFPLDLTADVCRERGMTVDEPAFDD 426
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ ++R +A+AA K+K + + + TF
Sbjct: 427 AM--ARQREQARAAG------------------KFKATQGLEYSGAKTTFHGY------- 459
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+++ D + G++++ ++ +A V + D T YA +GGQ+ D GV L
Sbjct: 460 ---EEIAFDDAKVVALYVDGSAVNEVKAGQDAVV--VLDHTPFYAESGGQVGDQGV--LA 512
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
N + + + ++ ++ + + G R E+DA+ R R H+ +HL
Sbjct: 513 NAAT---RFAVADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHL 569
Query: 655 LNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
++ ALR VL QK V +D+ DF+ + ++ D + VE+ +ND I
Sbjct: 570 MHKALREVLGAHVQQKGSLVDADKTRFDFA-HNAPMTDDEIRRVEQIVNDEILANAPGIV 628
Query: 714 RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVI 773
R M E + + GE Y D+V ++D+ SRE C GTHV TG I ++
Sbjct: 629 RVMPYDEAVKGGAMALF-GEKYGDEVRVLDLG-----FSRELCGGTHVHRTGDIGLFKIV 682
Query: 774 GYKSYNHGVRSIKCLTGDSS 793
G+R ++ +TGD++
Sbjct: 683 VEGGVAAGIRRVEAITGDNA 702
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG P PY R +Q+ +R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQRSVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT LP D+L+ T
Sbjct: 88 FFEMLGNFSFGDYFKHDAIKFAWELLT-TVYQLPKDKLWVT 127
>gi|422835922|ref|ZP_16883973.1| alanyl-tRNA synthetase [Escherichia coli E101]
gi|371611289|gb|EHN99813.1| alanyl-tRNA synthetase [Escherichia coli E101]
Length = 876
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 389/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G +++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFVVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|198245112|ref|YP_002216798.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|205353771|ref|YP_002227572.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207858091|ref|YP_002244742.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|375120290|ref|ZP_09765457.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|375124629|ref|ZP_09769793.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|378956447|ref|YP_005213934.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|421360409|ref|ZP_15810685.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421363183|ref|ZP_15813425.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421369506|ref|ZP_15819681.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421370147|ref|ZP_15820314.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421379112|ref|ZP_15829191.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421383217|ref|ZP_15833255.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421385134|ref|ZP_15835157.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421390081|ref|ZP_15840057.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421396507|ref|ZP_15846432.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421399286|ref|ZP_15849181.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421405491|ref|ZP_15855321.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421409812|ref|ZP_15859601.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421415119|ref|ZP_15864855.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421417276|ref|ZP_15866986.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421420614|ref|ZP_15870290.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421428260|ref|ZP_15877871.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421430702|ref|ZP_15880288.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421435870|ref|ZP_15885406.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421440288|ref|ZP_15889768.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421443654|ref|ZP_15893093.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421449125|ref|ZP_15898509.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|436799480|ref|ZP_20523766.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436807665|ref|ZP_20527708.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436818557|ref|ZP_20535190.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436832779|ref|ZP_20537069.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436852873|ref|ZP_20542898.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436861337|ref|ZP_20548521.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436867432|ref|ZP_20552586.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436872778|ref|ZP_20555660.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436880552|ref|ZP_20560311.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436891401|ref|ZP_20566101.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436899691|ref|ZP_20571102.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436903199|ref|ZP_20573663.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436914712|ref|ZP_20579559.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436919414|ref|ZP_20582195.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436928705|ref|ZP_20587911.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436938682|ref|ZP_20593469.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436945756|ref|ZP_20597584.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436955220|ref|ZP_20602095.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436965954|ref|ZP_20606623.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436969653|ref|ZP_20608650.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436985155|ref|ZP_20614740.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436994083|ref|ZP_20618652.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437004736|ref|ZP_20621966.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437022014|ref|ZP_20628142.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437027288|ref|ZP_20630177.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437043200|ref|ZP_20636713.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437050877|ref|ZP_20641022.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437062107|ref|ZP_20647473.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437067023|ref|ZP_20650085.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437073750|ref|ZP_20653192.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437082834|ref|ZP_20658577.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437096509|ref|ZP_20664874.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437110360|ref|ZP_20667706.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437118777|ref|ZP_20670512.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437129319|ref|ZP_20675795.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437135915|ref|ZP_20679553.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437145946|ref|ZP_20685735.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437153132|ref|ZP_20690238.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437158939|ref|ZP_20693527.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437168819|ref|ZP_20699257.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437176049|ref|ZP_20703225.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437184277|ref|ZP_20708142.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437264525|ref|ZP_20719801.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437269615|ref|ZP_20722858.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437277827|ref|ZP_20727186.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437302048|ref|ZP_20733382.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437315655|ref|ZP_20737343.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437327486|ref|ZP_20740428.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437341555|ref|ZP_20744678.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437369099|ref|ZP_20749104.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437408213|ref|ZP_20752369.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437445557|ref|ZP_20758279.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437463160|ref|ZP_20762842.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437483922|ref|ZP_20769006.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437495676|ref|ZP_20772820.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437519258|ref|ZP_20778628.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437526980|ref|ZP_20779988.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437555801|ref|ZP_20784768.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437574001|ref|ZP_20789663.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437594209|ref|ZP_20795756.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437605294|ref|ZP_20799473.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437620337|ref|ZP_20804057.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437644635|ref|ZP_20808720.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437664752|ref|ZP_20814366.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437675421|ref|ZP_20816756.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437710952|ref|ZP_20826630.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437721551|ref|ZP_20829075.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437796058|ref|ZP_20837573.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437808258|ref|ZP_20839963.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437864249|ref|ZP_20848039.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438094874|ref|ZP_20861829.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438101497|ref|ZP_20864324.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438116097|ref|ZP_20870616.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438121009|ref|ZP_20872117.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|445130018|ref|ZP_21381065.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445145594|ref|ZP_21387556.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|445159875|ref|ZP_21393363.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|445185522|ref|ZP_21398975.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445220785|ref|ZP_21403039.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445244885|ref|ZP_21408136.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445336182|ref|ZP_21415624.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445351793|ref|ZP_21420526.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445364902|ref|ZP_21425059.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|197939628|gb|ACH76961.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|205273552|emb|CAR38539.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|206709894|emb|CAR34247.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|326624557|gb|EGE30902.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|326628879|gb|EGE35222.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|357207058|gb|AET55104.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|395980976|gb|EJH90198.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395981629|gb|EJH90850.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395987644|gb|EJH96806.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395995447|gb|EJI04512.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|395995451|gb|EJI04515.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396007317|gb|EJI16273.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|396008961|gb|EJI17894.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396015140|gb|EJI24023.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396018766|gb|EJI27628.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396023565|gb|EJI32363.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396023745|gb|EJI32537.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396027380|gb|EJI36143.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396035154|gb|EJI43835.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396042111|gb|EJI50733.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396043659|gb|EJI52257.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396048295|gb|EJI56844.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396054528|gb|EJI63020.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396056282|gb|EJI64758.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396068423|gb|EJI76771.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|396069285|gb|EJI77623.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396070422|gb|EJI78750.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|434943349|gb|ELL49487.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434959510|gb|ELL52956.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434968621|gb|ELL61373.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434971101|gb|ELL63662.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434981378|gb|ELL73265.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434984218|gb|ELL75958.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434985781|gb|ELL77468.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434992584|gb|ELL84023.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|434999635|gb|ELL90809.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435005396|gb|ELL96318.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435005530|gb|ELL96450.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435012826|gb|ELM03501.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435019629|gb|ELM10073.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435022794|gb|ELM13090.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435029249|gb|ELM19307.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435033395|gb|ELM23287.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435034206|gb|ELM24096.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435035328|gb|ELM25173.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435045596|gb|ELM35222.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435046364|gb|ELM35979.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435058971|gb|ELM48278.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435062785|gb|ELM51959.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435064708|gb|ELM53828.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435072027|gb|ELM60956.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435077248|gb|ELM66004.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435083850|gb|ELM72451.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435085347|gb|ELM73900.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435088591|gb|ELM77048.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435093581|gb|ELM81921.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435097829|gb|ELM86088.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435107551|gb|ELM95534.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435108010|gb|ELM95988.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435108407|gb|ELM96372.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435118610|gb|ELN06261.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435126539|gb|ELN13933.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435131499|gb|ELN18710.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435136191|gb|ELN23281.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435137461|gb|ELN24512.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435140883|gb|ELN27825.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435149296|gb|ELN35992.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435150414|gb|ELN37086.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435156720|gb|ELN43210.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435159532|gb|ELN45850.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435160888|gb|ELN47130.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435172562|gb|ELN58105.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435173223|gb|ELN58748.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435178128|gb|ELN63364.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435180131|gb|ELN65239.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435191667|gb|ELN76223.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435193221|gb|ELN77700.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435204948|gb|ELN88597.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435207345|gb|ELN90818.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435209946|gb|ELN93217.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435217353|gb|ELN99787.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435218437|gb|ELO00838.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435226466|gb|ELO08031.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435227563|gb|ELO09054.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435242251|gb|ELO22562.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435246055|gb|ELO26076.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435247414|gb|ELO27365.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435251534|gb|ELO31145.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435257237|gb|ELO36531.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435257566|gb|ELO36848.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435265555|gb|ELO44383.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435273632|gb|ELO51897.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435277509|gb|ELO55450.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435288441|gb|ELO65460.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435290855|gb|ELO67748.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435294363|gb|ELO70999.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435299926|gb|ELO76021.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435314441|gb|ELO87866.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435324180|gb|ELO96113.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435327612|gb|ELO99263.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|435335949|gb|ELP06015.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|444844416|gb|ELX69656.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|444846367|gb|ELX71548.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|444852409|gb|ELX77488.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444870040|gb|ELX94584.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444870488|gb|ELX94990.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444874138|gb|ELX98404.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444874270|gb|ELX98535.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444883112|gb|ELY07020.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444890489|gb|ELY13818.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
Length = 876
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 254/818 (31%), Positives = 382/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQAEGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G ++++I A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDQTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG L L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHLGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V DFS + E + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIREVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M + + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDLDAAKAKGAMALF-GEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|432466839|ref|ZP_19708925.1| alanyl-tRNA synthetase [Escherichia coli KTE205]
gi|433073883|ref|ZP_20260531.1| alanyl-tRNA synthetase [Escherichia coli KTE129]
gi|433184358|ref|ZP_20368600.1| alanyl-tRNA synthetase [Escherichia coli KTE85]
gi|430992636|gb|ELD09005.1| alanyl-tRNA synthetase [Escherichia coli KTE205]
gi|431586494|gb|ELI57886.1| alanyl-tRNA synthetase [Escherichia coli KTE129]
gi|431704459|gb|ELJ69085.1| alanyl-tRNA synthetase [Escherichia coli KTE85]
Length = 876
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGSCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|165976064|ref|YP_001651657.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|205829970|sp|B0BNS8.1|SYA_ACTPJ RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|165876165|gb|ABY69213.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
Length = 874
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 267/830 (32%), Positives = 396/830 (47%), Gaps = 146/830 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR SFLD+F +++GHT+V SS +VP D ++ F N+GM QFK+VFLGL PY R
Sbjct: 3 TTSEIRQSFLDFF-HSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
+Q+CVR GGKHNDL G + HHTFFEM+GN+SF DY+K DA + E+LT P +
Sbjct: 62 TTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEG-------MKCNFWEMG 183
LP ++LY T + D+E DIW ++ GVP DHI + G NFW MG
Sbjct: 122 LPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWAMG 173
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IE+WNIVF+ R++ T+ L
Sbjct: 174 DTGPCGPCTEIFYDHGETFWGGLPGSP----EEDGDRYIEVWNIVFMQFNRLADGTMEKL 229
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ ++Q+ S Y+TD+F L I++V+G N +DLD
Sbjct: 230 PKPSVDTGMGLERMTAVMQHVNSNYETDIFQTL---IKEVAG---------LLNVSDLDN 277
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLV 349
S R+++D+ R + +AD + P + LR ++R A LL +++ F K LV
Sbjct: 278 KSLRVVADHIRACSYLIADGVVPSNEGRGYVLRRIIRRAVRHGNLLGAKEAFFYK---LV 334
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
L+ + G+V + Q I K + E EQF
Sbjct: 335 PTLATVMGHA-GEVLTQKQAHIQKT---------------------------LKAEEEQF 366
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L LTK +SG++AF LYDTYG ++ ++ ++LT+
Sbjct: 367 ARTLERGLALLEDALTK-----VENNTLSGEVAFKLYDTYGFPLDLTADVCRERELTIDE 421
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
FE ++ +ER AKA+SN D + + + + YD + T L +
Sbjct: 422 AGFEAEMTAQRER--AKASSNFG----TDYNNVIKVEGQTDF-IGYDNLEAQATIVGLFS 474
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
N G ++D+IQ +A + I D+T YA GGQ+ D G
Sbjct: 475 N-----------------------GKAVDTIQSGESAVI--ILDQTPFYAEMGGQVGDSG 509
Query: 590 VA------YLTNTTQENGKV--EIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
+ + N TQ+ G+V IG+L S G++ KVT V A
Sbjct: 510 LISTEICNFTVNDTQKYGQVFGHIGQLTS--------GSLSIGDKVTA------TVHATR 555
Query: 642 RLGCMRAHTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R+ H+ +HLL++ALR VL QK V + DFS E +S + +E+
Sbjct: 556 RIAITANHSATHLLHSALREVLGDHVAQKGSLVSENILRFDFS-QPEAISKSQLEEIERI 614
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I +QV M + + GE Y D V ++ +++ S E C GTH
Sbjct: 615 VNRKIRENIQVTIETMDIESAKKKGAMALF-GEKYGDVVRVVGMTE----FSIELCGGTH 669
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN-GKHLSTAASF 809
V TG I ++ + G+R ++ +T +++ + N K L +A F
Sbjct: 670 VQRTGDIGLFKLVSEGAVAAGIRRVEAVTAETAIEWLHNQQKVLQQSAEF 719
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL PY R +Q+C+R GGKHNDL G + HHT
Sbjct: 29 VPENDPTLLFTNAGMNQFKDVFLGLEKRPYTRATTAQRCVRAGGKHNDLENVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+K DA + E+LT P + LP ++LY T
Sbjct: 89 FFEMMGNFSFGDYFKHDAIQFGWEYLTSPQWLGLPKEKLYVT 130
>gi|218547790|ref|YP_002381581.1| alanyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
gi|218355331|emb|CAQ87938.1| alanyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
Length = 876
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRKVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|374598807|ref|ZP_09671809.1| alanyl-tRNA synthetase [Myroides odoratus DSM 2801]
gi|423323001|ref|ZP_17300843.1| alanyl-tRNA synthetase [Myroides odoratimimus CIP 103059]
gi|373910277|gb|EHQ42126.1| alanyl-tRNA synthetase [Myroides odoratus DSM 2801]
gi|404610022|gb|EKB09380.1| alanyl-tRNA synthetase [Myroides odoratimimus CIP 103059]
Length = 878
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 249/798 (31%), Positives = 377/798 (47%), Gaps = 101/798 (12%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S+ IR FL++F +GH +V S+PIV D ++ F NSGM QFK FLG R
Sbjct: 1 MKSQEIRQKFLNFF-EEKGHLIVPSAPIVLKDDPTLMFNNSGMAQFKEYFLGNATPKSKR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+A++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K++A A EFLT+ +
Sbjct: 60 IADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEAIAWAWEFLTE-VLK 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
L DRLY + F G+ +P D+E D+W + V D I K NFWEMG GPCG
Sbjct: 119 LEKDRLYVSVFEGNPAENVPFDQEAFDLWKQY-VAEDRIILGNKKDNFWEMGDQGPCGPC 177
Query: 192 SEIHYDMKGEPS----SALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGL 247
SEIH D++ + S + VNAD ++EIWN VF+ R + ++ L ++DTG+
Sbjct: 178 SEIHIDLRTDAERAAVSGFSLVNADHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237
Query: 248 GFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFT--TSNRTDLDTSYRMLSD 305
GFERL +Q TS YDTD+F PL+ +E+++G K T T + + + R++ D
Sbjct: 238 GFERLCMAMQGVTSNYDTDVFTPLIRKVEEITGLKYTDNTVKDITEQQNKTNIAIRVIVD 297
Query: 306 YSRMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+ R + A+AD P + + + + F + + +L +A +G
Sbjct: 298 HVRAVAFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLGTKEPFIYQLVEVLAVQMGAF 357
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
+PEI ++ ++ EE F LR LEQ GL +
Sbjct: 358 FPEIVAQKTLVENVIKEEEASF--LRT---------------LEQ-------GL-----H 388
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L Q+ + + G AF LYDT+G ++ + K L + FE +NE K RS
Sbjct: 389 LLDQVIEKTNGKVVDGAKAFELYDTFGFPIDLTALILREKGFELDEKGFEVAMNEQKTRS 448
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCI 543
+AAS V TDD +T + N+ V DQ+
Sbjct: 449 --RAASEVS------------TDD--------------WTI-LIGGNVEQFVGYDQL--- 476
Query: 544 DKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKV 603
++ ++ R +DS + L+ D T Y GGQ+ D G+ N +
Sbjct: 477 -ENQVKITRY-RKVDSKK--DGKLFQLVLDATPFYPEGGGQVGDCGLIVSANEA-----I 527
Query: 604 EIGELASLEGKIVHF-----GNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
++ + I+H NV +F ++V+V+AR + M H+ +HLL+ A
Sbjct: 528 QVIDTKKENNLILHIVRELPANVEGTF------AAKVDVEARQQ--SMANHSATHLLHQA 579
Query: 659 LRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
LR +L T QK V DFS + + ++ + + VE ++N I Q+ + R
Sbjct: 580 LRTILGTHVEQKGSLVSPTHLRFDFSHFAK-VTEEELQQVEDFVNSRIHEQLPLIERRSI 638
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
+ GE Y D+V I + S E C GTHV NT I ++ +
Sbjct: 639 PFNQAVAEGAMALFGEKYGDEVRAIRFGE-----SMELCGGTHVQNTADIWQFKIVSEGA 693
Query: 778 YNHGVRSIKCLTGDSSKA 795
G+R I+ +T +++A
Sbjct: 694 VAAGIRRIEAITNKAARA 711
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F NSGM QFK FLG R+A++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 32 DPTLMFNNSGMAQFKEYFLGNATPKSKRIADTQKCLRVSGKHNDLEDVGFDTYHHTMFEM 91
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A EFLT+ + L DRLY +
Sbjct: 92 LGNWSFGDYFKKEAIAWAWEFLTE-VLKLEKDRLYVS 127
>gi|251785981|ref|YP_003000285.1| alanyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|253772448|ref|YP_003035279.1| alanyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254162628|ref|YP_003045736.1| alanyl-tRNA synthetase [Escherichia coli B str. REL606]
gi|254289389|ref|YP_003055137.1| alanyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|242378254|emb|CAQ33029.1| alanyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|253323492|gb|ACT28094.1| alanyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253974529|gb|ACT40200.1| alanyl-tRNA synthetase [Escherichia coli B str. REL606]
gi|253978696|gb|ACT44366.1| alanyl-tRNA synthetase [Escherichia coli BL21(DE3)]
Length = 876
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNTQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|168230882|ref|ZP_02655940.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|194471872|ref|ZP_03077856.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194458236|gb|EDX47075.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|205334599|gb|EDZ21363.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
Length = 876
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 255/818 (31%), Positives = 382/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G ++++I A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDQTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG L L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHLGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V DFS + E + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIRQVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M E + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|445162149|ref|ZP_21393713.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444868889|gb|ELX93500.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
Length = 876
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 254/818 (31%), Positives = 382/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQAEGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G ++++I A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDQTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG L L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHLGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V DFS + E + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIREVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M + + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDLDAAKAKGAMALF-GEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|157148231|ref|YP_001455550.1| alanyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
gi|205830024|sp|A8ANQ1.1|SYA_CITK8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|157085436|gb|ABV15114.1| hypothetical protein CKO_04048 [Citrobacter koseri ATCC BAA-895]
Length = 875
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 254/815 (31%), Positives = 382/815 (46%), Gaps = 141/815 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP DRL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKDRLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAAYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S Y+ DLF L+E + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYEIDLFRTLIEAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLV 349
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 279 KSLRVIADHIRSCAFLIADGVVPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK----- 333
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
L + +++G E++ +++ +L + E EQF
Sbjct: 334 --LVGPLIDVMGSAGEELKRQQAQVEQVL------------------------KTEEEQF 367
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 368 ARTLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDE 422
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
FE + E +R +A+ AS D D ++ K Y L+
Sbjct: 423 AGFEAAMEE--QRRRAREASGFG----ADYNAMIRVDGASEF--------KGYDHLELNG 468
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD-- 587
+ + + G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 469 KVTALFV----------------DGKAVDAISAGQEAVV--VLDQTPFYAESGGQVGDKG 510
Query: 588 ----IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRL 643
G A+ + TQ+ G+ IG + +L + G+ V + +VD R
Sbjct: 511 ELKGAGFAFAVSDTQKYGQA-IGHIGTLSTGSLKVGDAVQA-----------DVDDARRA 558
Query: 644 GCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN 702
H+ +HL++AALR++L T QK V DFS + E + + AVE +N
Sbjct: 559 RIRLNHSATHLMHAALRQILGTHVAQKGSLVNDKVLRFDFS-HNEAMKPSEIRAVEDLVN 617
Query: 703 DVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVF 762
I + V+ M E + GE Y D V ++ + D S E C GTH
Sbjct: 618 AQIRRNLPVETNIMDL-EAAKAKGAMALFGEKYDDRVRVLSMGD----FSTELCGGTHAS 672
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I ++ GVR I+ +TG+ + A +
Sbjct: 673 RTGDIGLFRIVSESGTAAGVRRIEAVTGEGAIATL 707
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP DRL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKDRLWVT 131
>gi|432793848|ref|ZP_20027930.1| alanyl-tRNA synthetase [Escherichia coli KTE78]
gi|432795347|ref|ZP_20029408.1| alanyl-tRNA synthetase [Escherichia coli KTE79]
gi|431337918|gb|ELG25005.1| alanyl-tRNA synthetase [Escherichia coli KTE78]
gi|431350828|gb|ELG37633.1| alanyl-tRNA synthetase [Escherichia coli KTE79]
Length = 876
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|16130604|ref|NP_417177.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
gi|170082274|ref|YP_001731594.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
gi|188492036|ref|ZP_02999306.1| alanyl-tRNA synthetase [Escherichia coli 53638]
gi|194439000|ref|ZP_03071084.1| alanyl-tRNA synthetase [Escherichia coli 101-1]
gi|238901834|ref|YP_002927630.1| alanyl-tRNA synthetase [Escherichia coli BW2952]
gi|331643380|ref|ZP_08344511.1| alanine--tRNA ligase [Escherichia coli H736]
gi|386281742|ref|ZP_10059401.1| alanyl-tRNA synthetase [Escherichia sp. 4_1_40B]
gi|386594564|ref|YP_006090964.1| alanyl-tRNA synthetase [Escherichia coli DH1]
gi|387613320|ref|YP_006116436.1| alanyl-tRNA synthetase [Escherichia coli ETEC H10407]
gi|387622380|ref|YP_006130008.1| alanyl-tRNA synthetase [Escherichia coli DH1]
gi|388478714|ref|YP_490906.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
gi|404376001|ref|ZP_10981177.1| alanyl-tRNA synthetase [Escherichia sp. 1_1_43]
gi|417262406|ref|ZP_12049880.1| alanine--tRNA ligase [Escherichia coli 2.3916]
gi|417291559|ref|ZP_12078840.1| alanine--tRNA ligase [Escherichia coli B41]
gi|417614142|ref|ZP_12264599.1| alanyl-tRNA synthetase [Escherichia coli STEC_EH250]
gi|417944071|ref|ZP_12587316.1| alanyl-tRNA synthetase [Escherichia coli XH140A]
gi|417975531|ref|ZP_12616329.1| alanyl-tRNA synthetase [Escherichia coli XH001]
gi|419165463|ref|ZP_13709917.1| alanyl-tRNA synthetase [Escherichia coli DEC6E]
gi|419812892|ref|ZP_14337753.1| alanyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
gi|422771440|ref|ZP_16825130.1| alanyl-tRNA synthetase [Escherichia coli E482]
gi|422787779|ref|ZP_16840517.1| alanyl-tRNA synthetase [Escherichia coli H489]
gi|422791999|ref|ZP_16844701.1| alanyl-tRNA synthetase [Escherichia coli TA007]
gi|423703968|ref|ZP_17678393.1| alanyl-tRNA synthetase [Escherichia coli H730]
gi|432418138|ref|ZP_19660735.1| alanyl-tRNA synthetase [Escherichia coli KTE44]
gi|432564951|ref|ZP_19801527.1| alanyl-tRNA synthetase [Escherichia coli KTE51]
gi|432576923|ref|ZP_19813378.1| alanyl-tRNA synthetase [Escherichia coli KTE56]
gi|432628326|ref|ZP_19864299.1| alanyl-tRNA synthetase [Escherichia coli KTE77]
gi|432637908|ref|ZP_19873775.1| alanyl-tRNA synthetase [Escherichia coli KTE81]
gi|432661893|ref|ZP_19897532.1| alanyl-tRNA synthetase [Escherichia coli KTE111]
gi|432686503|ref|ZP_19921796.1| alanyl-tRNA synthetase [Escherichia coli KTE156]
gi|432687895|ref|ZP_19923175.1| alanyl-tRNA synthetase [Escherichia coli KTE161]
gi|432705449|ref|ZP_19940547.1| alanyl-tRNA synthetase [Escherichia coli KTE171]
gi|432738147|ref|ZP_19972902.1| alanyl-tRNA synthetase [Escherichia coli KTE42]
gi|432876549|ref|ZP_20094467.1| alanyl-tRNA synthetase [Escherichia coli KTE154]
gi|432956322|ref|ZP_20148049.1| alanyl-tRNA synthetase [Escherichia coli KTE197]
gi|433049076|ref|ZP_20236419.1| alanyl-tRNA synthetase [Escherichia coli KTE120]
gi|442595090|ref|ZP_21012954.1| Alanyl-tRNA synthetase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|442598432|ref|ZP_21016200.1| Alanyl-tRNA synthetase [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|450247469|ref|ZP_21901170.1| alanyl-tRNA ligase [Escherichia coli S17]
gi|2507425|sp|P00957.2|SYA_ECOLI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830082|sp|B1XCM5.1|SYA_ECODH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|1789048|gb|AAC75739.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
gi|1800083|dbj|BAA16559.1| alanyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
gi|169890109|gb|ACB03816.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
gi|188487235|gb|EDU62338.1| alanyl-tRNA synthetase [Escherichia coli 53638]
gi|194422121|gb|EDX38124.1| alanyl-tRNA synthetase [Escherichia coli 101-1]
gi|226839360|gb|EEH71381.1| alanyl-tRNA synthetase [Escherichia sp. 1_1_43]
gi|238859951|gb|ACR61949.1| alanyl-tRNA synthetase [Escherichia coli BW2952]
gi|260448253|gb|ACX38675.1| alanyl-tRNA synthetase [Escherichia coli DH1]
gi|309703056|emb|CBJ02388.1| alanyl-tRNA synthetase [Escherichia coli ETEC H10407]
gi|315137304|dbj|BAJ44463.1| alanyl-tRNA synthetase [Escherichia coli DH1]
gi|323941473|gb|EGB37656.1| alanyl-tRNA synthetase [Escherichia coli E482]
gi|323960644|gb|EGB56270.1| alanyl-tRNA synthetase [Escherichia coli H489]
gi|323971514|gb|EGB66748.1| alanyl-tRNA synthetase [Escherichia coli TA007]
gi|331036851|gb|EGI09075.1| alanine--tRNA ligase [Escherichia coli H736]
gi|342364205|gb|EGU28307.1| alanyl-tRNA synthetase [Escherichia coli XH140A]
gi|344194692|gb|EGV48764.1| alanyl-tRNA synthetase [Escherichia coli XH001]
gi|345361176|gb|EGW93337.1| alanyl-tRNA synthetase [Escherichia coli STEC_EH250]
gi|359332954|dbj|BAL39401.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. MDS42]
gi|378008392|gb|EHV71351.1| alanyl-tRNA synthetase [Escherichia coli DEC6E]
gi|385154307|gb|EIF16322.1| alanyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
gi|385707084|gb|EIG44116.1| alanyl-tRNA synthetase [Escherichia coli H730]
gi|386120933|gb|EIG69551.1| alanyl-tRNA synthetase [Escherichia sp. 4_1_40B]
gi|386223852|gb|EII46201.1| alanine--tRNA ligase [Escherichia coli 2.3916]
gi|386253881|gb|EIJ03571.1| alanine--tRNA ligase [Escherichia coli B41]
gi|430937979|gb|ELC58228.1| alanyl-tRNA synthetase [Escherichia coli KTE44]
gi|431092199|gb|ELD97903.1| alanyl-tRNA synthetase [Escherichia coli KTE51]
gi|431114159|gb|ELE17711.1| alanyl-tRNA synthetase [Escherichia coli KTE56]
gi|431162103|gb|ELE62561.1| alanyl-tRNA synthetase [Escherichia coli KTE77]
gi|431169323|gb|ELE69542.1| alanyl-tRNA synthetase [Escherichia coli KTE81]
gi|431198516|gb|ELE97338.1| alanyl-tRNA synthetase [Escherichia coli KTE111]
gi|431220477|gb|ELF17810.1| alanyl-tRNA synthetase [Escherichia coli KTE156]
gi|431237947|gb|ELF32893.1| alanyl-tRNA synthetase [Escherichia coli KTE161]
gi|431241987|gb|ELF36414.1| alanyl-tRNA synthetase [Escherichia coli KTE171]
gi|431280991|gb|ELF71899.1| alanyl-tRNA synthetase [Escherichia coli KTE42]
gi|431419590|gb|ELH01939.1| alanyl-tRNA synthetase [Escherichia coli KTE154]
gi|431466495|gb|ELH46515.1| alanyl-tRNA synthetase [Escherichia coli KTE197]
gi|431563388|gb|ELI36600.1| alanyl-tRNA synthetase [Escherichia coli KTE120]
gi|441604875|emb|CCP98104.1| Alanyl-tRNA synthetase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|441652942|emb|CCQ01799.1| Alanyl-tRNA synthetase [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|449318268|gb|EMD08342.1| alanyl-tRNA ligase [Escherichia coli S17]
Length = 876
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNTQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|331648414|ref|ZP_08349502.1| alanine--tRNA ligase [Escherichia coli M605]
gi|386620257|ref|YP_006139837.1| alanyl-tRNA synthetase [Escherichia coli NA114]
gi|387830543|ref|YP_003350480.1| alanyl-tRNA synthetase [Escherichia coli SE15]
gi|432422997|ref|ZP_19665539.1| alanyl-tRNA synthetase [Escherichia coli KTE178]
gi|432501136|ref|ZP_19742891.1| alanyl-tRNA synthetase [Escherichia coli KTE216]
gi|432559859|ref|ZP_19796526.1| alanyl-tRNA synthetase [Escherichia coli KTE49]
gi|432695463|ref|ZP_19930659.1| alanyl-tRNA synthetase [Escherichia coli KTE162]
gi|432706925|ref|ZP_19942005.1| alanyl-tRNA synthetase [Escherichia coli KTE6]
gi|432920690|ref|ZP_20124279.1| alanyl-tRNA synthetase [Escherichia coli KTE173]
gi|432928374|ref|ZP_20129494.1| alanyl-tRNA synthetase [Escherichia coli KTE175]
gi|432982023|ref|ZP_20170796.1| alanyl-tRNA synthetase [Escherichia coli KTE211]
gi|433097465|ref|ZP_20283646.1| alanyl-tRNA synthetase [Escherichia coli KTE139]
gi|433106909|ref|ZP_20292879.1| alanyl-tRNA synthetase [Escherichia coli KTE148]
gi|281179700|dbj|BAI56030.1| alanyl-tRNA synthetase [Escherichia coli SE15]
gi|331042161|gb|EGI14303.1| alanine--tRNA ligase [Escherichia coli M605]
gi|333970758|gb|AEG37563.1| Alanyl-tRNA synthetase [Escherichia coli NA114]
gi|430943270|gb|ELC63388.1| alanyl-tRNA synthetase [Escherichia coli KTE178]
gi|431027521|gb|ELD40583.1| alanyl-tRNA synthetase [Escherichia coli KTE216]
gi|431090060|gb|ELD95833.1| alanyl-tRNA synthetase [Escherichia coli KTE49]
gi|431232892|gb|ELF28494.1| alanyl-tRNA synthetase [Escherichia coli KTE162]
gi|431256870|gb|ELF49804.1| alanyl-tRNA synthetase [Escherichia coli KTE6]
gi|431439978|gb|ELH21308.1| alanyl-tRNA synthetase [Escherichia coli KTE173]
gi|431442361|gb|ELH23450.1| alanyl-tRNA synthetase [Escherichia coli KTE175]
gi|431490147|gb|ELH69764.1| alanyl-tRNA synthetase [Escherichia coli KTE211]
gi|431614442|gb|ELI83595.1| alanyl-tRNA synthetase [Escherichia coli KTE139]
gi|431625822|gb|ELI94379.1| alanyl-tRNA synthetase [Escherichia coli KTE148]
Length = 876
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 264/817 (32%), Positives = 389/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
F+ + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FDAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G S+D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKSVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L V S KV G + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKL---------AVGSLKV--GDAVQADVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|110642817|ref|YP_670547.1| alanyl-tRNA synthetase [Escherichia coli 536]
gi|432471983|ref|ZP_19714024.1| alanyl-tRNA synthetase [Escherichia coli KTE206]
gi|432714389|ref|ZP_19949423.1| alanyl-tRNA synthetase [Escherichia coli KTE8]
gi|433078829|ref|ZP_20265354.1| alanyl-tRNA synthetase [Escherichia coli KTE131]
gi|123147797|sp|Q0TEI3.1|SYA_ECOL5 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|110344409|gb|ABG70646.1| alanyl-tRNA synthetase [Escherichia coli 536]
gi|430996930|gb|ELD13200.1| alanyl-tRNA synthetase [Escherichia coli KTE206]
gi|431255106|gb|ELF48362.1| alanyl-tRNA synthetase [Escherichia coli KTE8]
gi|431595464|gb|ELI65461.1| alanyl-tRNA synthetase [Escherichia coli KTE131]
Length = 876
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|116689431|ref|YP_835054.1| alanyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
gi|116647520|gb|ABK08161.1| alanyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
Length = 897
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 240/805 (29%), Positives = 388/805 (48%), Gaps = 126/805 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG P PY R
Sbjct: 24 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSR 82
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT
Sbjct: 83 ATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLT-TVYQ 141
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP D+L+ T + D+E DIW E+GVP + I + G NFW MG
Sbjct: 142 LPKDKLWVTVY--------QEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMG 193
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWN+VF+ R + + L
Sbjct: 194 DTGPCGPCTEIFYDHGPDVWGGPPGSP----EEDGDRYIEIWNLVFMQFNRDAQGNMTRL 249
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ERL +LQ+ S Y+ DLF L+ K R S+ T +
Sbjct: 250 PKQSVDTGMGLERLAAVLQHVHSNYEIDLFQNLI---------KAAARVTEISDLT--NN 298
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELSY 354
S ++++D+ R + + D + P + LR +VR A+ +K+ ++G +L
Sbjct: 299 SLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAI---RHGYKLGRKGAFFHKLVA 355
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
++ +G YPE++++ E R+ D LR+ E E+F E
Sbjct: 356 DLVAEMGTAYPELKEA----------EQRVTDVLRQ--------------EEERFFETIE 391
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
G+ + L + A+ + + G++AF L+DTYG ++ ++ + +T+ AF+
Sbjct: 392 HGMSILEAALAEVEAKGGKV--LDGELAFKLHDTYGFPLDLTADVCRERGMTVDEPAFDD 449
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ ++R +A+AA K+K + + + TF
Sbjct: 450 AM--ARQREQARAAG------------------KFKATQGLEYSGAKTTFHGY------- 482
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+++ D + G++++ ++ +A V + D T YA +GGQ+ D GV L
Sbjct: 483 ---EEIAFDDAKVVALYVDGSAVNEVKAGQDAVV--VLDHTPFYAESGGQVGDQGV--LA 535
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
N + + + ++ ++ + + G R E+DA+ R R H+ +HL
Sbjct: 536 NAAT---RFAVADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHL 592
Query: 655 LNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYI-NDVIANQVQVD 712
++ ALR VL QK V +D+ DF+ + ++ D + VE+ + N+++AN +
Sbjct: 593 MHKALREVLGAHVQQKGSLVDADKTRFDFA-HNAPMTDDEIRRVEQIVNNEILANAPGIV 651
Query: 713 RRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIE 768
R +P+ + + GE Y D+V ++D+ SRE C GTHV TG I
Sbjct: 652 RV------MPYDEAVKGGAMALFGEKYGDEVRVLDLG-----FSRELCGGTHVHRTGDIG 700
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSS 793
++ G+R ++ +TGD++
Sbjct: 701 LFKIVVEGGVAAGIRRVEAITGDNA 725
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG P PY R +Q+ +R GGKHNDL G + HHT
Sbjct: 51 VPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQRSVRAGGKHNDLENVGYTARHHT 110
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT LP D+L+ T
Sbjct: 111 FFEMLGNFSFGDYFKHDAIKFAWELLT-TVYQLPKDKLWVT 150
>gi|218706191|ref|YP_002413710.1| alanyl-tRNA synthetase [Escherichia coli UMN026]
gi|293406188|ref|ZP_06650114.1| alaS [Escherichia coli FVEC1412]
gi|298381926|ref|ZP_06991523.1| alanyl-tRNA synthetase [Escherichia coli FVEC1302]
gi|331664248|ref|ZP_08365154.1| alanine--tRNA ligase [Escherichia coli TA143]
gi|387608333|ref|YP_006097189.1| alanyl-tRNA synthetase [Escherichia coli 042]
gi|417587703|ref|ZP_12238469.1| alanyl-tRNA synthetase [Escherichia coli STEC_C165-02]
gi|419934472|ref|ZP_14451580.1| alanyl-tRNA synthetase [Escherichia coli 576-1]
gi|432354602|ref|ZP_19597871.1| alanyl-tRNA synthetase [Escherichia coli KTE2]
gi|432402951|ref|ZP_19645701.1| alanyl-tRNA synthetase [Escherichia coli KTE26]
gi|432427221|ref|ZP_19669714.1| alanyl-tRNA synthetase [Escherichia coli KTE181]
gi|432461682|ref|ZP_19703826.1| alanyl-tRNA synthetase [Escherichia coli KTE204]
gi|432476910|ref|ZP_19718904.1| alanyl-tRNA synthetase [Escherichia coli KTE208]
gi|432490498|ref|ZP_19732365.1| alanyl-tRNA synthetase [Escherichia coli KTE213]
gi|432518779|ref|ZP_19755963.1| alanyl-tRNA synthetase [Escherichia coli KTE228]
gi|432538949|ref|ZP_19775848.1| alanyl-tRNA synthetase [Escherichia coli KTE235]
gi|432632447|ref|ZP_19868370.1| alanyl-tRNA synthetase [Escherichia coli KTE80]
gi|432642159|ref|ZP_19877989.1| alanyl-tRNA synthetase [Escherichia coli KTE83]
gi|432667153|ref|ZP_19902731.1| alanyl-tRNA synthetase [Escherichia coli KTE116]
gi|432771610|ref|ZP_20005932.1| alanyl-tRNA synthetase [Escherichia coli KTE50]
gi|432775737|ref|ZP_20010004.1| alanyl-tRNA synthetase [Escherichia coli KTE54]
gi|432840522|ref|ZP_20073985.1| alanyl-tRNA synthetase [Escherichia coli KTE140]
gi|432887785|ref|ZP_20101713.1| alanyl-tRNA synthetase [Escherichia coli KTE158]
gi|432913949|ref|ZP_20119534.1| alanyl-tRNA synthetase [Escherichia coli KTE190]
gi|432963033|ref|ZP_20152452.1| alanyl-tRNA synthetase [Escherichia coli KTE202]
gi|433019766|ref|ZP_20207946.1| alanyl-tRNA synthetase [Escherichia coli KTE105]
gi|433054329|ref|ZP_20241499.1| alanyl-tRNA synthetase [Escherichia coli KTE122]
gi|433064100|ref|ZP_20251014.1| alanyl-tRNA synthetase [Escherichia coli KTE125]
gi|433068976|ref|ZP_20255757.1| alanyl-tRNA synthetase [Escherichia coli KTE128]
gi|433159714|ref|ZP_20344545.1| alanyl-tRNA synthetase [Escherichia coli KTE177]
gi|433179518|ref|ZP_20363909.1| alanyl-tRNA synthetase [Escherichia coli KTE82]
gi|433204404|ref|ZP_20388165.1| alanyl-tRNA synthetase [Escherichia coli KTE95]
gi|218433288|emb|CAR14188.1| alanyl-tRNA synthetase [Escherichia coli UMN026]
gi|284922633|emb|CBG35721.1| alanyl-tRNA synthetase [Escherichia coli 042]
gi|291426194|gb|EFE99226.1| alaS [Escherichia coli FVEC1412]
gi|298277066|gb|EFI18582.1| alanyl-tRNA synthetase [Escherichia coli FVEC1302]
gi|331058179|gb|EGI30160.1| alanine--tRNA ligase [Escherichia coli TA143]
gi|345334038|gb|EGW66483.1| alanyl-tRNA synthetase [Escherichia coli STEC_C165-02]
gi|388407875|gb|EIL68236.1| alanyl-tRNA synthetase [Escherichia coli 576-1]
gi|430873510|gb|ELB97076.1| alanyl-tRNA synthetase [Escherichia coli KTE2]
gi|430924542|gb|ELC45254.1| alanyl-tRNA synthetase [Escherichia coli KTE26]
gi|430954257|gb|ELC73136.1| alanyl-tRNA synthetase [Escherichia coli KTE181]
gi|430987956|gb|ELD04469.1| alanyl-tRNA synthetase [Escherichia coli KTE204]
gi|431004060|gb|ELD19292.1| alanyl-tRNA synthetase [Escherichia coli KTE208]
gi|431019199|gb|ELD32606.1| alanyl-tRNA synthetase [Escherichia coli KTE213]
gi|431049812|gb|ELD59690.1| alanyl-tRNA synthetase [Escherichia coli KTE228]
gi|431068327|gb|ELD76808.1| alanyl-tRNA synthetase [Escherichia coli KTE235]
gi|431169012|gb|ELE69243.1| alanyl-tRNA synthetase [Escherichia coli KTE80]
gi|431180114|gb|ELE80002.1| alanyl-tRNA synthetase [Escherichia coli KTE83]
gi|431199565|gb|ELE98313.1| alanyl-tRNA synthetase [Escherichia coli KTE116]
gi|431313615|gb|ELG01585.1| alanyl-tRNA synthetase [Escherichia coli KTE50]
gi|431316994|gb|ELG04780.1| alanyl-tRNA synthetase [Escherichia coli KTE54]
gi|431387825|gb|ELG71637.1| alanyl-tRNA synthetase [Escherichia coli KTE140]
gi|431415263|gb|ELG97808.1| alanyl-tRNA synthetase [Escherichia coli KTE158]
gi|431437896|gb|ELH19402.1| alanyl-tRNA synthetase [Escherichia coli KTE190]
gi|431471608|gb|ELH51500.1| alanyl-tRNA synthetase [Escherichia coli KTE202]
gi|431529378|gb|ELI06079.1| alanyl-tRNA synthetase [Escherichia coli KTE105]
gi|431569127|gb|ELI42088.1| alanyl-tRNA synthetase [Escherichia coli KTE122]
gi|431579987|gb|ELI52557.1| alanyl-tRNA synthetase [Escherichia coli KTE125]
gi|431581869|gb|ELI54310.1| alanyl-tRNA synthetase [Escherichia coli KTE128]
gi|431676099|gb|ELJ42222.1| alanyl-tRNA synthetase [Escherichia coli KTE177]
gi|431699632|gb|ELJ64630.1| alanyl-tRNA synthetase [Escherichia coli KTE82]
gi|431719100|gb|ELJ83161.1| alanyl-tRNA synthetase [Escherichia coli KTE95]
Length = 876
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 263/817 (32%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IGVAYLTN------TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G TN TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGTNFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|422780386|ref|ZP_16833171.1| alanyl-tRNA synthetase [Escherichia coli TW10509]
gi|323978695|gb|EGB73777.1| alanyl-tRNA synthetase [Escherichia coli TW10509]
Length = 876
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGVNFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|197119994|ref|YP_002140421.1| alanyl-tRNA synthetase [Geobacter bemidjiensis Bem]
gi|197089354|gb|ACH40625.1| alanyl-tRNA synthetase [Geobacter bemidjiensis Bem]
Length = 875
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 256/810 (31%), Positives = 379/810 (46%), Gaps = 123/810 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ K IR+ F ++F +GH LV+SS ++P D ++ F N+GM QFK+VFLG+ Y R
Sbjct: 1 MTGKEIRAQFFNFF-QKKGHALVESSNLIPRNDPTLLFTNAGMNQFKDVFLGMEKRDYLR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQKCVR GGKHNDL GR + HHTFFEMLGN+SF DY+K++A A EFLTK +
Sbjct: 60 AVSSQKCVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIGFAWEFLTKE-LG 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
L DRLY T + D+E DIW + GVPR+ I + G K NFW MG TGPCG
Sbjct: 119 LSKDRLYVTVY--------TDDDEAADIWHNQEGVPRERIYRFGEKDNFWSMGDTGPCGP 170
Query: 191 SSEIHYDMK-----GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
+EI +D G P A V D + +EIWN VF+ R + PL K +DT
Sbjct: 171 CTEIFWDNGPGTGCGSPDCA---VGCDCDRYMEIWNNVFMQFNRGKDGVLTPLPKPSVDT 227
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ++Q TS YDTDL ++ IE+VSG K + D D S R+++D
Sbjct: 228 GMGLERISAVMQGVTSNYDTDLLQGIIRHIEQVSGKK------YRDDEKD-DVSMRVIAD 280
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDA------LLISEDVFKVKQGKLVKELSYNI 356
++R +T + D + P + LR ++R A L I+E V ++V ++
Sbjct: 281 HARAVTFLICDGVLPSNEGRGYVLRRIMRRAARHAKMLGIAEPVLF----RIVDAVNM-- 334
Query: 357 AEILGDVYPEIQDSINKIQ-LILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEP 415
++GD YPE+ + + ++ +IL EE R + L +
Sbjct: 335 --MMGDAYPELLEREHYVKKVILAEEERFIETLDR------------------------- 367
Query: 416 GLVLGVKYLTKQLARDPSITE--ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF- 472
G+ L ++ A + E ISG++ F LYDT+G ++ ++ ++ TL + F
Sbjct: 368 ----GLAILNEETAALKAKGEKVISGEVIFKLYDTFGFPVDLTADIVESEGFTLDEDGFA 423
Query: 473 ---EQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
E++ + +E K + DI +L +T D Y S++ F +
Sbjct: 424 LCMEKQRVKARENWKGSGEQGLADI-YKELHGTGITTDFLGY-------SEQTAFSTISA 475
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG 589
IV G + + A +G I+ ++ T Y +GGQ D G
Sbjct: 476 ----IVKGGTL-------VEEASAGDEIE-----------IVTAATPFYGESGGQAGDTG 513
Query: 590 VAYLTNTTQENGKVEI-GELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA 648
+ +G +E+ G IVH G VVS V G + +++ R R
Sbjct: 514 -----TISTGSGHIEVTGSTRPFTDLIVHRGRVVSG-AVRTGEAADLKITVANRAATARN 567
Query: 649 HTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
HT +HLL AALR VL Q V D DF+ + ++ + + VE +N I
Sbjct: 568 HTATHLLQAALREVLGDHVKQAGSLVTPDRLRFDFTHF-TPMTQEEIRRVEILVNGHIMG 626
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHI 767
V+ R E+P L ++ + + K +S E C GTHV G I
Sbjct: 627 NSTVESR-----EMPAADALAAGATALFGEKYGDVVRVVKVGDVSSELCGGTHVHGAGEI 681
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
+I GVR I+ TG + A V
Sbjct: 682 GFFKIISEAGIAAGVRRIEAQTGSGALAVV 711
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG+ Y R +SQKC+R GGKHNDL GR + HHT
Sbjct: 28 IPRNDPTLLFTNAGMNQFKDVFLGMEKRDYLRAVSSQKCVRAGGKHNDLENVGRTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K++A A EFLTK + L DRLY T
Sbjct: 88 FFEMLGNFSFGDYFKKEAIGFAWEFLTK-ELGLSKDRLYVT 127
>gi|204928130|ref|ZP_03219330.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|204322452|gb|EDZ07649.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
Length = 876
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 254/818 (31%), Positives = 382/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGEHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G ++++I A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDRTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG L L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHLGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V DFS + E + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIRQVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M + + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDLDAARAKGAMALF-GEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|334703005|ref|ZP_08518871.1| alanyl-tRNA synthetase [Aeromonas caviae Ae398]
Length = 874
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 262/848 (30%), Positives = 392/848 (46%), Gaps = 159/848 (18%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR++FL+YF TQGH +V SS +VP+ D ++ F N+GM QFK+VFLG Y R
Sbjct: 3 MSTSEIRAAFLEYF-RTQGHQVVSSSSLVPHNDPTLLFTNAGMNQFKDVFLGADKRAYHR 61
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA R A EFLT +
Sbjct: 62 ATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIRFAWEFLTGT-LK 120
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL T + D+E DIW E+GVP D I + G NFW MG
Sbjct: 121 LPKERLLVTVY--------ATDDEAFDIWEKEVGVPADRIVRIGDNKGAPYASDNFWAMG 172
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWN+VF+ R + T+ PL
Sbjct: 173 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRFIEIWNVVFMQFNRQADGTMEPL 228
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
+ +DTG+G ER+ I+Q S Y+ D+F L++ ++ G TDL +
Sbjct: 229 PRPSVDTGMGLERISAIMQGVHSNYEIDIFQALIKKAAEIVGT------------TDLSN 276
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLV 349
S R+++D+ R +AD + P + LR ++R A+ L + DVF K L
Sbjct: 277 QSLRVIADHIRSCAFLVADGVMPSNEGRGYVLRRIIRRAVRHGRKLGATDVFFYK---LA 333
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKT--QPELE 407
EL+ + ++ ++ ++ PLV+ + E E
Sbjct: 334 AELAVQMKDVAAELIAQL------------------------------PLVERVLRIEEE 363
Query: 408 QFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTL 467
QF + GL+L L LA I G++ F LYDTYG ++ ++ +++ +
Sbjct: 364 QFVRTLDRGLLL----LEDVLANLGDAKVIPGEVVFKLYDTYGFPADLTADVVREREIGI 419
Query: 468 CHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVT-DDKYKYDYHYDTNSKRYTFPC 526
E F+ ++ K+R++AK AS+ F V +D K D ++T Y
Sbjct: 420 DEEGFKAEME--KQRARAKEASS-----------FGVNYNDVLKLD--FETPFTGYKQLS 464
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
+T +VGI + G ++ + A + + +T YA +GGQ+
Sbjct: 465 QNTQVVGIY----------------KDGVEVNGLIAGEEAVI--VLAETPFYAESGGQVG 506
Query: 587 DIGV------AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G+ + TQ+ GK I+H G + + G VD
Sbjct: 507 DSGILKVDDGIFAVTDTQKAGKA-----------IIHKG-YLELGTLEKGAEVEAVVDGD 554
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HLL+AALR+ L QK V ++ DFS + E L++ ++ +E+
Sbjct: 555 RRQAIALNHSVTHLLHAALRQALGEHVTQKGSLVGAERMRFDFSHF-EGLTMATIRRIEE 613
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I +V + M E + + GE Y DDV ++ + D S E C GT
Sbjct: 614 LVNAQIRANHEVATQLMGLEEAKSAGAMALF-GEKYEDDVRVVRMGD----YSTELCGGT 668
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS-------------KAAVENGKHLSTA 806
H TG I +I GVR I+ +TG S+ AA+ G S A
Sbjct: 669 HAKRTGDIGFFKIIAESGIAAGVRRIEAVTGKSAIDLMHQLGEQIEEAAALVKGDQFSIA 728
Query: 807 ASFSQILN 814
Q+L+
Sbjct: 729 DKVRQVLD 736
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLG Y R +Q+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGADKRAYHRATTAQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K+DA R A EFLT + LP +RL T
Sbjct: 90 FFEMLGNFSFGDYFKQDAIRFAWEFLT-GTLKLPKERLLVT 129
>gi|331654174|ref|ZP_08355174.1| alanine--tRNA ligase [Escherichia coli M718]
gi|331047556|gb|EGI19633.1| alanine--tRNA ligase [Escherichia coli M718]
Length = 876
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVTQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|27262306|gb|AAN87434.1| Alanyl-tRNA synthetase [Heliobacillus mobilis]
Length = 883
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 260/809 (32%), Positives = 383/809 (47%), Gaps = 125/809 (15%)
Query: 10 VRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPY 69
++ +R FL+YF +GHT+V SS +VP+ D ++ F N+GM QFK++FLG PY
Sbjct: 1 MQFTGNRVRQLFLEYF-EQKGHTVVASSSLVPHNDPTLLFTNAGMNQFKDLFLGYEKRPY 59
Query: 70 PRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP 129
R SQKCVR GGKHNDL GR + HHTFFEMLGN+SF DY+K+DA R A EFLT
Sbjct: 60 VRATTSQKCVRAGGKHNDLDTVGRTARHHTFFEMLGNFSFGDYFKKDAIRFAWEFLTDV- 118
Query: 130 VSLPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPC 188
V LP D+LY T + DEE ++W E+GVP + I + G K NFW MG TGPC
Sbjct: 119 VKLPKDKLYATIY--------LDDEEAHELWKKEIGVPEERIIRLGEKDNFWSMGDTGPC 170
Query: 189 GYSSEIHYDMK-----GEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYI 243
G SEI D G A+ + + DR +EIWN+VF+ R + PL K I
Sbjct: 171 GPCSEILIDRGEHLRCGAEECAIGKCDCDR--WLEIWNLVFMQFNRDEQGVMTPLPKPSI 228
Query: 244 DTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRML 303
DTG+G ER+ ++LQ+ S YDTDL PL+ +E++SG K Y +R D +R++
Sbjct: 229 DTGMGLERITSVLQDVPSNYDTDLLRPLITYVEQLSG-KEY-------HRDDRGFPFRVI 280
Query: 304 SDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KELSYNIA 357
+D+ R T + D + P + LR ++R A V+ GK++ K Y I
Sbjct: 281 ADHIRSCTFLITDGVLPGNEGRGYVLRRILRRA---------VRFGKVIGIEKPFMYQIV 331
Query: 358 ----EILGDVYPEIQDSINKIQLILG-EESRIFDNLRKAAVKEWKPLVKTQPELEQFNIM 412
E++G+ YPEI++ + +Q ++ EE R + L + + K +
Sbjct: 332 PVVVELMGEAYPEIKEKQDFVQKVIKIEEERFHETLHEGMRIAADIVAK---------VK 382
Query: 413 EEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF 472
E+ G VL G AFTLYDTYG ++ +++A LT+ + F
Sbjct: 383 EDGGGVL------------------PGRQAFTLYDTYGFPLDLAEDIAEENGLTVDKDGF 424
Query: 473 EQKLNELKERSKAK------AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPC 526
+ +ER++A A DL++ K P T Y
Sbjct: 425 AAAMEAQRERARAARQDTSYGAGMEIWADLLN-KLGP-------------TAFTGYGQLS 470
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
+ L+ IV G + + A G ++ + E T YA +GGQI
Sbjct: 471 GQSQLLAIVSGPE-------QVAEASVGTAVQVVLAE-----------TPFYAESGGQIG 512
Query: 587 DIGVAYLTNTTQENGKVEIGELASLEGKI-VHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
D G Y+ + + I + + G + VH G VV G T EV R
Sbjct: 513 DTG--YIRT---DKAIIRIDDTKKMAGGLFVHVG-VVEEGTFQAGETVTAEVTGLRRQAI 566
Query: 646 MRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
R H+ +HLL+ AL+ VL Q V D DFS + L+ + +E+ +N
Sbjct: 567 ARHHSATHLLHRALKDVLGEHVNQAGSLVTGDRLRFDFSHF-TPLTREEWKQIEESVNRQ 625
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNT 764
+ + V+ E + T + GE Y D V ++ + D S E C GTH+ NT
Sbjct: 626 VFRSLPVEVFEATLDEAKAMG-ATALFGEKYGDHVRVVRMGD----YSMELCGGTHLQNT 680
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
I ++ G+R ++ +TG+++
Sbjct: 681 AQIGLFKLVSEGGIGAGLRRLEAVTGEAA 709
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK++FLG PY R SQKC+R GGKHNDL GR + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDLFLGYEKRPYVRATTSQKCVRAGGKHNDLDTVGRTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K+DA R A EFLT V LP D+LY T
Sbjct: 90 FFEMLGNFSFGDYFKKDAIRFAWEFLTD-VVKLPKDKLYATI 130
>gi|168262064|ref|ZP_02684037.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|200387922|ref|ZP_03214534.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|416425094|ref|ZP_11692129.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416428272|ref|ZP_11693772.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416438728|ref|ZP_11699707.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416444997|ref|ZP_11704041.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416451728|ref|ZP_11708478.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416459694|ref|ZP_11714139.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416471519|ref|ZP_11719239.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416475510|ref|ZP_11720657.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416488620|ref|ZP_11725833.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416499449|ref|ZP_11730816.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416544803|ref|ZP_11753059.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416576943|ref|ZP_11769469.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416584965|ref|ZP_11774569.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416590574|ref|ZP_11777828.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416606621|ref|ZP_11787889.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416616498|ref|ZP_11794122.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416621840|ref|ZP_11796603.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416627129|ref|ZP_11799000.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416640360|ref|ZP_11804978.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416647453|ref|ZP_11808392.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416656581|ref|ZP_11813267.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416667825|ref|ZP_11818505.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416679149|ref|ZP_11822873.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416691442|ref|ZP_11826221.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416706281|ref|ZP_11831540.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416712040|ref|ZP_11835751.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416718236|ref|ZP_11840344.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416726820|ref|ZP_11846865.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416731056|ref|ZP_11848991.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416741150|ref|ZP_11854901.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416749479|ref|ZP_11859268.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416753629|ref|ZP_11860933.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416765270|ref|ZP_11868651.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416768830|ref|ZP_11870828.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|418482086|ref|ZP_13051109.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418493530|ref|ZP_13059996.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418501079|ref|ZP_13067469.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418505327|ref|ZP_13071673.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418510560|ref|ZP_13076839.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418512177|ref|ZP_13078420.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|418524861|ref|ZP_13090846.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|199605020|gb|EDZ03565.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205349249|gb|EDZ35880.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|322614354|gb|EFY11285.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322621581|gb|EFY18434.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322624442|gb|EFY21275.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322628773|gb|EFY25556.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322633500|gb|EFY30242.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322635924|gb|EFY32632.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322639632|gb|EFY36317.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322646815|gb|EFY43318.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322650583|gb|EFY46988.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322654805|gb|EFY51124.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322659025|gb|EFY55278.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322664408|gb|EFY60602.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322668343|gb|EFY64500.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322673677|gb|EFY69778.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322681432|gb|EFY77464.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322683834|gb|EFY79844.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323193777|gb|EFZ78980.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323200247|gb|EFZ85329.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323203250|gb|EFZ88279.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323212791|gb|EFZ97602.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323216317|gb|EGA01044.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323221065|gb|EGA05496.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323226886|gb|EGA11068.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323230830|gb|EGA14948.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323234819|gb|EGA18905.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323238858|gb|EGA22908.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323241558|gb|EGA25589.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323248295|gb|EGA32231.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323251121|gb|EGA34994.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323255840|gb|EGA39588.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323263139|gb|EGA46677.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323264356|gb|EGA47862.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323271183|gb|EGA54611.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|366064383|gb|EHN28582.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366064819|gb|EHN29016.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366067051|gb|EHN31205.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366067634|gb|EHN31782.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366076151|gb|EHN40190.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366083684|gb|EHN47600.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|366830430|gb|EHN57301.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372207720|gb|EHP21219.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
Length = 876
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 254/818 (31%), Positives = 382/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G ++++I A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDQTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG L L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHLGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V DFS + E + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIRQVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M + + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDLDAAKAKGAMALF-GEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|429143630|gb|AFZ77083.1| alanyl-tRNA synthetase [Gilliamella apicola]
Length = 877
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 253/804 (31%), Positives = 389/804 (48%), Gaps = 127/804 (15%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F ++GH +V SS +VP+ D ++ F N+GM QFK++FLG+ Y R
Sbjct: 3 STAEIRQNFLDFF-QSKGHEVVASSSLVPHNDPTLLFTNAGMNQFKDIFLGIDKRSYTRA 61
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+KRDA A E LT +
Sbjct: 62 TTSQRCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDAIYFAWELLTSEKWFN 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
+P ++L T + D+E IW E+G+P++ I + G NFW+MG
Sbjct: 122 IPKEKLTVTVY--------ETDDEAFSIWENEIGIPKERIIRIGDNKGAPYASDNFWQMG 173
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P SA D + IEIWNIVF+ R S + PL
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSA----EEDGDRFIEIWNIVFMQFNRNSNGIMEPL 229
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S Y+ DLF L++ K+ TS DL++
Sbjct: 230 PKPSVDTGMGLERIAAVLQHVNSNYEIDLFKKLIQEAAKI---------IETS---DLES 277
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKE--- 351
S R+++D+ R ++D + P + LR ++R A V+ G ++
Sbjct: 278 KSLRVIADHIRSCAFLISDGVLPSNEGRGYVLRRIIRRA---------VRHGHMLGAKGI 328
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + + L DV +N+ + I+ + +I E EQF
Sbjct: 329 FFYKLVKPLIDVMDIAATELNQNRKIVEDTLKI--------------------EEEQFLK 368
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++L + T + GD+AF LYDTYG ++ ++ K +T+
Sbjct: 369 TLERGLFL----LDQELVKITG-TILPGDVAFKLYDTYGFPLDLTADVCREKNITIDESG 423
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNL 531
F Q + E ++R++ ++ +V +++ L DDK ++ + DT S
Sbjct: 424 FNQCMEEQRKRARESSSFSVDYSNVIKL------DDKTEFLGYQDTESLGKVIAIFKN-- 475
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
G +V CI+ A D+I +I DKT Y +GGQI D G+
Sbjct: 476 -----GQKVECIN----------AGDDAI---------VILDKTPFYGESGGQIGDKGL- 510
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHFGNVV-SSFKVTPGLTSRVEVDARMRLGCMRAHT 650
T N + + + I H G+V+ S KV +T+ ++++ R R+ R H+
Sbjct: 511 ----LTSANLEFSVLDSQKYGKSIGHLGHVIKGSLKVGDNVTAAIDIELRERI--RRNHS 564
Query: 651 TSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQV 709
+HLL AAL+R+L +QK V + DFS + + ++ + + +E +N I + +
Sbjct: 565 ATHLLQAALQRILGNHVHQKGSLVNENYLRFDFS-HNQAITPEQINEIENLVNQQIRHNL 623
Query: 710 QVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIES 769
QVD M + + + GE Y + V ++ + D S E C GTHV TG I
Sbjct: 624 QVDIEFMPIDDAKNKGAMALF-GEKYENIVRVLTMGD----FSIELCGGTHVNRTGDIGL 678
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSS 793
+ S GVR I+ TG ++
Sbjct: 679 FKITSESSIASGVRRIEATTGQNA 702
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK++FLG+ Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 29 VPHNDPTLLFTNAGMNQFKDIFLGIDKRSYTRATTSQRCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA A E LT ++P ++L T
Sbjct: 89 FFEMLGNFSFGDYFKRDAIYFAWELLTSEKWFNIPKEKLTVT 130
>gi|365898632|ref|ZP_09436577.1| alanyl-tRNA synthetase [Bradyrhizobium sp. STM 3843]
gi|365420543|emb|CCE09119.1| alanyl-tRNA synthetase [Bradyrhizobium sp. STM 3843]
Length = 889
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 251/827 (30%), Positives = 392/827 (47%), Gaps = 117/827 (14%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FL++F GH +V SSP+VP D ++ F N+GM QFKNVF G+ PY R SQ
Sbjct: 7 IRSTFLNFFAE-NGHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGVEKRPYSRATTSQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K +A +A + +T+ LP ++
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKDNAIELAWKLVTR-EFGLPKEK 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
L+ T + D+E D+W ++ G+P I + NFW+MG TGPCG SEI
Sbjct: 125 LWATVY--------IDDDEAFDLWRKISGLPESRIIRIAGSDNFWQMGDTGPCGPCSEIF 176
Query: 196 YD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
YD G P S AD + IEIWN+VF+ +++ V L K IDTG G E
Sbjct: 177 YDHGDKVWGGPPGSP----EADGDRYIEIWNLVFMQYEQFEGGERVRLPKPSIDTGAGLE 232
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +LQ K YD DLF+ L+ I ++ A P G S R+++D+ R
Sbjct: 233 RVAAVLQGKHDNYDIDLFVALIRAIADLTNADPQGPQ---------KASLRVIADHLRAS 283
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+ ++D + P + LR ++R A+ ++ + ++ L+ L + +G YPE
Sbjct: 284 SFLISDGVLPSNEGRGYVLRRIMRRAMRHAQ-LLGARE-PLMHRLVGTLTREMGQAYPE- 340
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
LI E A +KE L +T +F E GL + L ++
Sbjct: 341 --------LIRAE----------ALIKETLRLEET-----RFRKTLERGLAI----LDEK 373
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
A GD AFTLYDTYG ++ Q+ ++ +++ +F ++ ++R+KA+A
Sbjct: 374 AAGLKQGDMFDGDTAFTLYDTYGFPLDLTQDALKSRGISVDQASFTDAMD--RQRAKARA 431
Query: 488 ASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHA 547
A + + ++ FP + +G ++ +
Sbjct: 432 A----------------------WAGSGEAATETVWFPLREKLGATEFLGYEIETAEGAV 469
Query: 548 IRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA-------YLTNTTQEN 600
+ GA +DS L ++ ++T YA +GGQ+ DIGV +T+T ++
Sbjct: 470 TALVKDGAEVDS--LSKGDAGAIVLNQTPFYAESGGQVGDIGVMRGDGVTFRVTDTQKKA 527
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALR 660
G + VH G V + G +++VD R H+ +H+L+ ALR
Sbjct: 528 GDL-----------FVHLGTVEEG-TLKLGTALQLDVDHGRRSAIRANHSATHILHEALR 575
Query: 661 RVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRAS 719
+VL Q+ V D DF+ + + +S D +A VE NDV+ +V R M A
Sbjct: 576 QVLGDHIAQRGSLVSPDRLRFDFA-HPKPISPDELARVEDIANDVVLENSEVTTRLM-AL 633
Query: 720 ELPFLTHLTVIPGEIYPDDVILIDISDKE-----NVI--SREPCCGTHVFNTGHIESCTV 772
+ + GE Y D+V ++ + + N + S E C GTHV TG I +V
Sbjct: 634 DDAREAGARALFGEKYGDEVRVVAMGNAARDHGTNAMGWSVELCGGTHVKRTGDIGLISV 693
Query: 773 IGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQILNVGNIP 819
+ + GVR I+ LTG ++ + L+ +A+ + ++P
Sbjct: 694 TSESAVSSGVRRIEALTGRRARKHANDTIALAKSAAAELRTTIDDVP 740
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFKNVF G+ PY R SQKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFTNAGMVQFKNVFTGVEKRPYSRATTSQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K +A +A + +T+ LP ++L+ T
Sbjct: 89 FFEMLGNFSFGDYFKDNAIELAWKLVTR-EFGLPKEKLWAT 128
>gi|157162143|ref|YP_001459461.1| alanyl-tRNA synthetase [Escherichia coli HS]
gi|218690819|ref|YP_002399031.1| alanyl-tRNA synthetase [Escherichia coli ED1a]
gi|227888232|ref|ZP_04006037.1| alanyl-tRNA synthetase [Escherichia coli 83972]
gi|331658802|ref|ZP_08359744.1| alanine--tRNA ligase [Escherichia coli TA206]
gi|386630430|ref|YP_006150150.1| alanyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
gi|386635350|ref|YP_006155069.1| alanyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
gi|386640179|ref|YP_006106977.1| alanyl-tRNA synthetase [Escherichia coli ABU 83972]
gi|419920193|ref|ZP_14438319.1| alanyl-tRNA synthetase [Escherichia coli KD2]
gi|432366153|ref|ZP_19609272.1| alanyl-tRNA synthetase [Escherichia coli KTE10]
gi|432412821|ref|ZP_19655481.1| alanyl-tRNA synthetase [Escherichia coli KTE39]
gi|432432896|ref|ZP_19675321.1| alanyl-tRNA synthetase [Escherichia coli KTE187]
gi|432437378|ref|ZP_19679765.1| alanyl-tRNA synthetase [Escherichia coli KTE188]
gi|432457719|ref|ZP_19699899.1| alanyl-tRNA synthetase [Escherichia coli KTE201]
gi|432486447|ref|ZP_19728360.1| alanyl-tRNA synthetase [Escherichia coli KTE212]
gi|432496714|ref|ZP_19738509.1| alanyl-tRNA synthetase [Escherichia coli KTE214]
gi|432505458|ref|ZP_19747179.1| alanyl-tRNA synthetase [Escherichia coli KTE220]
gi|432524852|ref|ZP_19761977.1| alanyl-tRNA synthetase [Escherichia coli KTE230]
gi|432527460|ref|ZP_19764548.1| alanyl-tRNA synthetase [Escherichia coli KTE233]
gi|432554714|ref|ZP_19791433.1| alanyl-tRNA synthetase [Escherichia coli KTE47]
gi|432569740|ref|ZP_19806249.1| alanyl-tRNA synthetase [Escherichia coli KTE53]
gi|432582227|ref|ZP_19818641.1| alanyl-tRNA synthetase [Escherichia coli KTE57]
gi|432593873|ref|ZP_19830186.1| alanyl-tRNA synthetase [Escherichia coli KTE60]
gi|432608540|ref|ZP_19844723.1| alanyl-tRNA synthetase [Escherichia coli KTE67]
gi|432652181|ref|ZP_19887932.1| alanyl-tRNA synthetase [Escherichia coli KTE87]
gi|432671768|ref|ZP_19907295.1| alanyl-tRNA synthetase [Escherichia coli KTE119]
gi|432733438|ref|ZP_19968264.1| alanyl-tRNA synthetase [Escherichia coli KTE45]
gi|432751108|ref|ZP_19985708.1| alanyl-tRNA synthetase [Escherichia coli KTE29]
gi|432760524|ref|ZP_19995015.1| alanyl-tRNA synthetase [Escherichia coli KTE46]
gi|432784571|ref|ZP_20018749.1| alanyl-tRNA synthetase [Escherichia coli KTE63]
gi|432845673|ref|ZP_20078407.1| alanyl-tRNA synthetase [Escherichia coli KTE141]
gi|432853822|ref|ZP_20082367.1| alanyl-tRNA synthetase [Escherichia coli KTE144]
gi|432899801|ref|ZP_20110311.1| alanyl-tRNA synthetase [Escherichia coli KTE192]
gi|432974808|ref|ZP_20163643.1| alanyl-tRNA synthetase [Escherichia coli KTE209]
gi|432996363|ref|ZP_20184947.1| alanyl-tRNA synthetase [Escherichia coli KTE218]
gi|433000934|ref|ZP_20189456.1| alanyl-tRNA synthetase [Escherichia coli KTE223]
gi|433029584|ref|ZP_20217438.1| alanyl-tRNA synthetase [Escherichia coli KTE109]
gi|433059142|ref|ZP_20246182.1| alanyl-tRNA synthetase [Escherichia coli KTE124]
gi|433088341|ref|ZP_20274708.1| alanyl-tRNA synthetase [Escherichia coli KTE137]
gi|433116546|ref|ZP_20302333.1| alanyl-tRNA synthetase [Escherichia coli KTE153]
gi|433121223|ref|ZP_20306889.1| alanyl-tRNA synthetase [Escherichia coli KTE157]
gi|433126216|ref|ZP_20311769.1| alanyl-tRNA synthetase [Escherichia coli KTE160]
gi|433140284|ref|ZP_20325535.1| alanyl-tRNA synthetase [Escherichia coli KTE167]
gi|433150203|ref|ZP_20335218.1| alanyl-tRNA synthetase [Escherichia coli KTE174]
gi|433174570|ref|ZP_20359087.1| alanyl-tRNA synthetase [Escherichia coli KTE232]
gi|433208780|ref|ZP_20392452.1| alanyl-tRNA synthetase [Escherichia coli KTE97]
gi|433213564|ref|ZP_20397152.1| alanyl-tRNA synthetase [Escherichia coli KTE99]
gi|442603568|ref|ZP_21018439.1| Alanyl-tRNA synthetase [Escherichia coli Nissle 1917]
gi|205830083|sp|A8A3H4.1|SYA_ECOHS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|157067823|gb|ABV07078.1| alanyl-tRNA synthetase [Escherichia coli HS]
gi|218428383|emb|CAR09311.2| alanyl-tRNA synthetase [Escherichia coli ED1a]
gi|227834501|gb|EEJ44967.1| alanyl-tRNA synthetase [Escherichia coli 83972]
gi|307554671|gb|ADN47446.1| alanyl-tRNA synthetase [Escherichia coli ABU 83972]
gi|331053384|gb|EGI25413.1| alanine--tRNA ligase [Escherichia coli TA206]
gi|355421329|gb|AER85526.1| alanyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
gi|355426249|gb|AER90445.1| alanyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
gi|388385430|gb|EIL47113.1| alanyl-tRNA synthetase [Escherichia coli KD2]
gi|430892424|gb|ELC14915.1| alanyl-tRNA synthetase [Escherichia coli KTE10]
gi|430934281|gb|ELC54648.1| alanyl-tRNA synthetase [Escherichia coli KTE39]
gi|430951078|gb|ELC70298.1| alanyl-tRNA synthetase [Escherichia coli KTE187]
gi|430961551|gb|ELC79558.1| alanyl-tRNA synthetase [Escherichia coli KTE188]
gi|430981004|gb|ELC97744.1| alanyl-tRNA synthetase [Escherichia coli KTE201]
gi|431014970|gb|ELD28534.1| alanyl-tRNA synthetase [Escherichia coli KTE212]
gi|431022407|gb|ELD35668.1| alanyl-tRNA synthetase [Escherichia coli KTE214]
gi|431036974|gb|ELD47962.1| alanyl-tRNA synthetase [Escherichia coli KTE220]
gi|431050526|gb|ELD60271.1| alanyl-tRNA synthetase [Escherichia coli KTE230]
gi|431062276|gb|ELD71549.1| alanyl-tRNA synthetase [Escherichia coli KTE233]
gi|431082065|gb|ELD88379.1| alanyl-tRNA synthetase [Escherichia coli KTE47]
gi|431098832|gb|ELE04138.1| alanyl-tRNA synthetase [Escherichia coli KTE53]
gi|431122509|gb|ELE25378.1| alanyl-tRNA synthetase [Escherichia coli KTE57]
gi|431126275|gb|ELE28622.1| alanyl-tRNA synthetase [Escherichia coli KTE60]
gi|431136619|gb|ELE38475.1| alanyl-tRNA synthetase [Escherichia coli KTE67]
gi|431189281|gb|ELE88704.1| alanyl-tRNA synthetase [Escherichia coli KTE87]
gi|431209447|gb|ELF07554.1| alanyl-tRNA synthetase [Escherichia coli KTE119]
gi|431273204|gb|ELF64290.1| alanyl-tRNA synthetase [Escherichia coli KTE45]
gi|431295602|gb|ELF85339.1| alanyl-tRNA synthetase [Escherichia coli KTE29]
gi|431306764|gb|ELF95069.1| alanyl-tRNA synthetase [Escherichia coli KTE46]
gi|431327728|gb|ELG15048.1| alanyl-tRNA synthetase [Escherichia coli KTE63]
gi|431393849|gb|ELG77395.1| alanyl-tRNA synthetase [Escherichia coli KTE141]
gi|431398237|gb|ELG81657.1| alanyl-tRNA synthetase [Escherichia coli KTE144]
gi|431424941|gb|ELH07016.1| alanyl-tRNA synthetase [Escherichia coli KTE192]
gi|431486874|gb|ELH66519.1| alanyl-tRNA synthetase [Escherichia coli KTE209]
gi|431503907|gb|ELH82639.1| alanyl-tRNA synthetase [Escherichia coli KTE218]
gi|431507444|gb|ELH85729.1| alanyl-tRNA synthetase [Escherichia coli KTE223]
gi|431542133|gb|ELI17372.1| alanyl-tRNA synthetase [Escherichia coli KTE109]
gi|431567784|gb|ELI40776.1| alanyl-tRNA synthetase [Escherichia coli KTE124]
gi|431603357|gb|ELI72782.1| alanyl-tRNA synthetase [Escherichia coli KTE137]
gi|431632562|gb|ELJ00849.1| alanyl-tRNA synthetase [Escherichia coli KTE153]
gi|431641056|gb|ELJ08800.1| alanyl-tRNA synthetase [Escherichia coli KTE157]
gi|431642967|gb|ELJ10671.1| alanyl-tRNA synthetase [Escherichia coli KTE160]
gi|431658631|gb|ELJ25542.1| alanyl-tRNA synthetase [Escherichia coli KTE167]
gi|431669435|gb|ELJ35858.1| alanyl-tRNA synthetase [Escherichia coli KTE174]
gi|431690632|gb|ELJ56108.1| alanyl-tRNA synthetase [Escherichia coli KTE232]
gi|431729228|gb|ELJ92863.1| alanyl-tRNA synthetase [Escherichia coli KTE97]
gi|431733477|gb|ELJ96912.1| alanyl-tRNA synthetase [Escherichia coli KTE99]
gi|441715613|emb|CCQ04416.1| Alanyl-tRNA synthetase [Escherichia coli Nissle 1917]
Length = 876
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|432373270|ref|ZP_19616308.1| alanyl-tRNA synthetase [Escherichia coli KTE11]
gi|430895276|gb|ELC17547.1| alanyl-tRNA synthetase [Escherichia coli KTE11]
Length = 876
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 257/813 (31%), Positives = 385/813 (47%), Gaps = 145/813 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P SA D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSA----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q ++ + ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQALV------------------EQVLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGASFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I + GVR I+ +TG+ +
Sbjct: 671 ASRTGDIGLFRITSESGTAAGVRRIEAVTGEGA 703
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|417282120|ref|ZP_12069420.1| alanine--tRNA ligase [Escherichia coli 3003]
gi|417284969|ref|ZP_12072260.1| alanine--tRNA ligase [Escherichia coli TW07793]
gi|419701495|ref|ZP_14229094.1| alanyl-tRNA synthetase [Escherichia coli SCI-07]
gi|419915901|ref|ZP_14434233.1| alanyl-tRNA synthetase [Escherichia coli KD1]
gi|422970163|ref|ZP_16973956.1| alanyl-tRNA synthetase [Escherichia coli TA124]
gi|371600541|gb|EHN89313.1| alanyl-tRNA synthetase [Escherichia coli TA124]
gi|380346957|gb|EIA35246.1| alanyl-tRNA synthetase [Escherichia coli SCI-07]
gi|386246449|gb|EII88179.1| alanine--tRNA ligase [Escherichia coli 3003]
gi|386250210|gb|EII96377.1| alanine--tRNA ligase [Escherichia coli TW07793]
gi|388382634|gb|EIL44484.1| alanyl-tRNA synthetase [Escherichia coli KD1]
Length = 876
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
F+ + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FDAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G S+D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKSVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|91212055|ref|YP_542041.1| alanyl-tRNA synthetase [Escherichia coli UTI89]
gi|117624928|ref|YP_853916.1| alanyl-tRNA synthetase [Escherichia coli APEC O1]
gi|218559685|ref|YP_002392598.1| alanyl-tRNA synthetase [Escherichia coli S88]
gi|237706683|ref|ZP_04537164.1| alanyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
gi|386600686|ref|YP_006102192.1| penicillin-binding protein 7 [Escherichia coli IHE3034]
gi|386603251|ref|YP_006109551.1| alanyl-tRNA synthetase [Escherichia coli UM146]
gi|417086132|ref|ZP_11953368.1| alanyl-tRNA synthetase [Escherichia coli cloneA_i1]
gi|419944729|ref|ZP_14461203.1| alanyl-tRNA synthetase [Escherichia coli HM605]
gi|422750285|ref|ZP_16804196.1| alanyl-tRNA synthetase [Escherichia coli H252]
gi|422754539|ref|ZP_16808365.1| alanyl-tRNA synthetase [Escherichia coli H263]
gi|422840683|ref|ZP_16888653.1| alanyl-tRNA synthetase [Escherichia coli H397]
gi|432358997|ref|ZP_19602215.1| alanyl-tRNA synthetase [Escherichia coli KTE4]
gi|432363861|ref|ZP_19607019.1| alanyl-tRNA synthetase [Escherichia coli KTE5]
gi|432574812|ref|ZP_19811289.1| alanyl-tRNA synthetase [Escherichia coli KTE55]
gi|432588996|ref|ZP_19825350.1| alanyl-tRNA synthetase [Escherichia coli KTE58]
gi|432755548|ref|ZP_19990094.1| alanyl-tRNA synthetase [Escherichia coli KTE22]
gi|432779628|ref|ZP_20013850.1| alanyl-tRNA synthetase [Escherichia coli KTE59]
gi|432788620|ref|ZP_20022748.1| alanyl-tRNA synthetase [Escherichia coli KTE65]
gi|432822056|ref|ZP_20055746.1| alanyl-tRNA synthetase [Escherichia coli KTE118]
gi|432823566|ref|ZP_20057236.1| alanyl-tRNA synthetase [Escherichia coli KTE123]
gi|433006148|ref|ZP_20194574.1| alanyl-tRNA synthetase [Escherichia coli KTE227]
gi|433008816|ref|ZP_20197230.1| alanyl-tRNA synthetase [Escherichia coli KTE229]
gi|433154766|ref|ZP_20339702.1| alanyl-tRNA synthetase [Escherichia coli KTE176]
gi|433164651|ref|ZP_20349384.1| alanyl-tRNA synthetase [Escherichia coli KTE179]
gi|122422735|sp|Q1R804.1|SYA_ECOUT RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830084|sp|A1AEN7.1|SYA_ECOK1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|91073629|gb|ABE08510.1| alanyl-tRNA synthetase [Escherichia coli UTI89]
gi|115514052|gb|ABJ02127.1| alanyl-tRNA synthetase [Escherichia coli APEC O1]
gi|218366454|emb|CAR04206.1| alanyl-tRNA synthetase [Escherichia coli S88]
gi|226899723|gb|EEH85982.1| alanyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
gi|294489971|gb|ADE88727.1| penicillin-binding protein 7 [Escherichia coli IHE3034]
gi|307625735|gb|ADN70039.1| alanyl-tRNA synthetase [Escherichia coli UM146]
gi|323951085|gb|EGB46961.1| alanyl-tRNA synthetase [Escherichia coli H252]
gi|323957093|gb|EGB52818.1| alanyl-tRNA synthetase [Escherichia coli H263]
gi|355350657|gb|EHF99853.1| alanyl-tRNA synthetase [Escherichia coli cloneA_i1]
gi|371605694|gb|EHN94302.1| alanyl-tRNA synthetase [Escherichia coli H397]
gi|388417871|gb|EIL77698.1| alanyl-tRNA synthetase [Escherichia coli HM605]
gi|430875518|gb|ELB99053.1| alanyl-tRNA synthetase [Escherichia coli KTE4]
gi|430884317|gb|ELC07257.1| alanyl-tRNA synthetase [Escherichia coli KTE5]
gi|431106648|gb|ELE10847.1| alanyl-tRNA synthetase [Escherichia coli KTE55]
gi|431119019|gb|ELE22034.1| alanyl-tRNA synthetase [Escherichia coli KTE58]
gi|431300852|gb|ELF90399.1| alanyl-tRNA synthetase [Escherichia coli KTE22]
gi|431325543|gb|ELG12926.1| alanyl-tRNA synthetase [Escherichia coli KTE59]
gi|431335620|gb|ELG22749.1| alanyl-tRNA synthetase [Escherichia coli KTE65]
gi|431367125|gb|ELG53611.1| alanyl-tRNA synthetase [Escherichia coli KTE118]
gi|431378091|gb|ELG63082.1| alanyl-tRNA synthetase [Escherichia coli KTE123]
gi|431512516|gb|ELH90607.1| alanyl-tRNA synthetase [Escherichia coli KTE227]
gi|431522555|gb|ELH99787.1| alanyl-tRNA synthetase [Escherichia coli KTE229]
gi|431672792|gb|ELJ39026.1| alanyl-tRNA synthetase [Escherichia coli KTE176]
gi|431685482|gb|ELJ51052.1| alanyl-tRNA synthetase [Escherichia coli KTE179]
Length = 876
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 260/817 (31%), Positives = 389/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P ++ LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNESRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
F+ + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FDAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|83316024|ref|XP_731046.1| alanyl-tRNA synthetase [Plasmodium yoelii yoelii 17XNL]
gi|23490961|gb|EAA22611.1| alanyl-tRNA synthetase, putative [Plasmodium yoelii yoelii]
Length = 1218
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 269/901 (29%), Positives = 431/901 (47%), Gaps = 138/901 (15%)
Query: 7 SSYVRLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTP 66
+ Y + S+ +R++F++YF N + HT+V S+ ++PY D+++ F N+GM QFK +FLG
Sbjct: 185 NEYKYMTSEQVRNNFINYFKN-KNHTVVDSASVIPYNDNTLLFTNAGMNQFKKIFLGNVD 243
Query: 67 -----APYPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMA 121
R ++QKC+R GGKHNDL G+D YHHTFFEMLGNWSF DY+K ++ A
Sbjct: 244 KNSDLGKLKRCVDTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKEESIEYA 303
Query: 122 LEFLTKPPVSLPLDRLYFTYFGGSDQY-GLPCDEETRDIWLELGVPRDHIKKEGMKCNFW 180
+ LT P DRLY TYFGG P D E + IW + + I GMK NFW
Sbjct: 304 WDLLTNVYKINP-DRLYVTYFGGDKNLPSCPPDLEAKKIWSKY-LDEKRILPFGMKDNFW 361
Query: 181 EMGSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSK 240
EM TGPCG SEIHYD G A VN D ++EIWNIVF+ + + + L
Sbjct: 362 EMAETGPCGPCSEIHYDRIGN-RDASDLVNKDDPSVLEIWNIVFMQYNKDENKNMNKLPS 420
Query: 241 NYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKV--SGAKPYGRTFTTSNRTDLDT 298
IDTG+G ER+ +ILQN S YDTDLF P+ + I+++ + Y + +D
Sbjct: 421 PCIDTGMGLERITSILQNVQSNYDTDLFTPIFKQIKEIFNNSIPSYQGKINEEDPDKIDY 480
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKL-VKELSY 354
+YR++SD+ R T+A++D P + +R ++R A+ + + VF +K L +L
Sbjct: 481 AYRVISDHIRCATIAISDGCIPSNEGRNYVIRRIIRRAVRVGKQVFNIKSNVLWFYKLVD 540
Query: 355 NIAEILGDVYPEIQ--DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIM 412
++ +ILG+ + ++Q + +N I+ ++ +E IF+ + V +QFN
Sbjct: 541 SVCKILGNCFKDLQNEEKVNYIKNVIMQEELIFNKTLEKGV-------------DQFN-- 585
Query: 413 EEPGLVLGVKYLTKQLARDPSITE--ISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
+ K+ ++PS + SG AF LY +YG ++I+ + K + L E
Sbjct: 586 ----------KIIKKCHQNPSNSNNLFSGKDAFDLYTSYGFPIDLIEIMCEEKNVKLNME 635
Query: 471 AFEQKLNELKERSKAKAASNVPDID-LMDLKHFPVTDDKYKY------DYH-YDTNSKRY 522
F N L ++ + + +N I+ ++DL + K KY DYH Y+ N+
Sbjct: 636 EF----NTLFKKHQLISDTNNFKINKVIDLPVEKAHEIKCKYNVLPTIDYHKYNWNNTFE 691
Query: 523 TFPCLDTNLVGIVIGDQVFCI------DK--HAIRHARSGASIDSIQLEHNAWVGLIFDK 574
+ N + + V I D+ + + +S + + E + LI +
Sbjct: 692 DIKSKEENKNNLRLKSSVQIIYDGNFLDELVYTDNETKEPSSCEKTENEQKKY-ALILKE 750
Query: 575 TNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVS-SFKVTPGLTS 633
TN Y GGQI D G ++ N E+ K ++ + + I+H G ++S S K + +
Sbjct: 751 TNFYYENGGQIYDTG--FIQN---ESMKFQVLNVQKMNDYILHIGVLLSGSIKKNDVIET 805
Query: 634 RVEVDARMRLGCMRAHTTSHLLNAALRRVL------------------------------ 663
V+ + R + C HT +HLLN ALR+VL
Sbjct: 806 VVDFERRKLIAC--NHTATHLLNFALRKVLEDQMNQTKNKCDNKDENKKGSLEDSSAIKN 863
Query: 664 ------------------TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI 705
C QK V ++ DFS + + +++D + +E IN+++
Sbjct: 864 KLEGNSSCNNNSNGSSIFNCE-QKGSLVDDEKLRFDFS-FIQNINMDVLNKIETEINNIV 921
Query: 706 ANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS-DKENVI-----------SR 753
++ V + M +E + + I E Y D V ++ IS + +NV+ S
Sbjct: 922 KEELDVSIKTMDLTESKKIKGIRAIFEEDYSDKVNVVFISKNADNVLNNLDINYTYLCSI 981
Query: 754 EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQIL 813
E C GTH+ NT +I+ + +S G+ I +T + KA N K A + +
Sbjct: 982 ELCGGTHIGNTKYIKEFIITSEESIGKGIHRINAVT--NKKAEEINKKFDDLVAKYKHVF 1039
Query: 814 N 814
+
Sbjct: 1040 D 1040
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 68/107 (63%), Gaps = 6/107 (5%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTP-----APYPRVANSQKCIRVGGKHNDLSFAGRD 872
IPY D+++ F N+GM QFK +FLG R ++QKCIR GGKHNDL G+D
Sbjct: 217 IPYNDNTLLFTNAGMNQFKKIFLGNVDKNSDLGKLKRCVDTQKCIRAGGKHNDLDDVGKD 276
Query: 873 SYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
YHHTFFEMLGNWSF DY+K ++ A + LT P DRLY T+
Sbjct: 277 VYHHTFFEMLGNWSFGDYFKEESIEYAWDLLTNVYKINP-DRLYVTY 322
>gi|215488016|ref|YP_002330447.1| alanyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
gi|417756934|ref|ZP_12405006.1| alanyl-tRNA synthetase [Escherichia coli DEC2B]
gi|418997993|ref|ZP_13545584.1| alanyl-tRNA synthetase [Escherichia coli DEC1A]
gi|419003253|ref|ZP_13550773.1| alanyl-tRNA synthetase [Escherichia coli DEC1B]
gi|419009121|ref|ZP_13556545.1| alanyl-tRNA synthetase [Escherichia coli DEC1C]
gi|419014603|ref|ZP_13561949.1| alanyl-tRNA synthetase [Escherichia coli DEC1D]
gi|419025475|ref|ZP_13572695.1| alanyl-tRNA synthetase [Escherichia coli DEC2A]
gi|419030173|ref|ZP_13577330.1| alanyl-tRNA synthetase [Escherichia coli DEC2C]
gi|419035787|ref|ZP_13582871.1| alanyl-tRNA synthetase [Escherichia coli DEC2D]
gi|419040862|ref|ZP_13587886.1| alanyl-tRNA synthetase [Escherichia coli DEC2E]
gi|432544295|ref|ZP_19781135.1| alanyl-tRNA synthetase [Escherichia coli KTE236]
gi|432549785|ref|ZP_19786550.1| alanyl-tRNA synthetase [Escherichia coli KTE237]
gi|432622887|ref|ZP_19858913.1| alanyl-tRNA synthetase [Escherichia coli KTE76]
gi|432719802|ref|ZP_19954768.1| alanyl-tRNA synthetase [Escherichia coli KTE9]
gi|432816382|ref|ZP_20050163.1| alanyl-tRNA synthetase [Escherichia coli KTE115]
gi|215266088|emb|CAS10508.1| alanyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
gi|377842476|gb|EHU07530.1| alanyl-tRNA synthetase [Escherichia coli DEC1C]
gi|377842678|gb|EHU07728.1| alanyl-tRNA synthetase [Escherichia coli DEC1A]
gi|377846017|gb|EHU11033.1| alanyl-tRNA synthetase [Escherichia coli DEC1B]
gi|377855848|gb|EHU20712.1| alanyl-tRNA synthetase [Escherichia coli DEC1D]
gi|377861163|gb|EHU25983.1| alanyl-tRNA synthetase [Escherichia coli DEC2A]
gi|377872649|gb|EHU37292.1| alanyl-tRNA synthetase [Escherichia coli DEC2B]
gi|377876425|gb|EHU41030.1| alanyl-tRNA synthetase [Escherichia coli DEC2C]
gi|377878789|gb|EHU43372.1| alanyl-tRNA synthetase [Escherichia coli DEC2D]
gi|377889174|gb|EHU53641.1| alanyl-tRNA synthetase [Escherichia coli DEC2E]
gi|431073230|gb|ELD80881.1| alanyl-tRNA synthetase [Escherichia coli KTE236]
gi|431078953|gb|ELD85932.1| alanyl-tRNA synthetase [Escherichia coli KTE237]
gi|431157915|gb|ELE58537.1| alanyl-tRNA synthetase [Escherichia coli KTE76]
gi|431261305|gb|ELF53344.1| alanyl-tRNA synthetase [Escherichia coli KTE9]
gi|431363262|gb|ELG49831.1| alanyl-tRNA synthetase [Escherichia coli KTE115]
Length = 876
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|397667526|ref|YP_006509063.1| alanyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila]
gi|395130937|emb|CCD09186.1| alanyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila]
Length = 860
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 252/816 (30%), Positives = 389/816 (47%), Gaps = 150/816 (18%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR +FL+YF +GH +V SS +VP D ++ F N+GM QFK++FLGL Y R
Sbjct: 1 MKSSEIRQAFLNYFVQ-RGHQIVASSSLVPSNDPTLLFTNAGMVQFKDLFLGLETRSYQR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A +Q+CVR GGKHNDL G + HHTFFEMLGN+SF DY+KR+A + A EFLT+ +
Sbjct: 60 AATAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWEFLTE-VLH 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+P +RL+ T + D E DIWL E+ V + + G K NFW MG TGPCG
Sbjct: 119 IPAERLWVTVY--------KEDLEAEDIWLREMKVSPERFSRCGEKDNFWSMGDTGPCGP 170
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
+EI YD G P S + D + IEIWN+VF+ R + PL K +DT
Sbjct: 171 CTEIFYDHGPEVAGGPPGSP----DEDGDRYIEIWNLVFMQFNRDREGHLHPLPKPSVDT 226
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLD---TSYRM 302
G+G ERL ++Q S Y+ D F L++ I ++ D+D TS ++
Sbjct: 227 GMGLERLAAVIQGVHSNYEIDSFQYLIKAIAQLG--------------QDIDLNHTSLKV 272
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGK-------LVKEL 352
++D+ R + + D + P + LR ++R A V+ G +L
Sbjct: 273 IADHIRSCSFLIVDGVLPSNEGRGYVLRRIIRRA---------VRHGNKLGLPSPFFSKL 323
Query: 353 SYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIM 412
+ +++GD YPE+ +S I+ IL Q E QF
Sbjct: 324 VQPLIDVMGDAYPELINSKAHIERIL------------------------QQEENQFTRT 359
Query: 413 EEPGLVL---GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L +K L Q E+SG++AF LYDTYG ++ ++ + L +
Sbjct: 360 LEQGLRLLQDHIKNLQGQ--------ELSGEVAFKLYDTYGFPIDLTADIIREQGLHIDM 411
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
EAF Q + + +E+S+A A+ D + V+ ++ ++H Y ++
Sbjct: 412 EAFNQLMQQQREQSQA-ASQFTTD-------YHAVSQLDHQSEFH------GYEKESMEA 457
Query: 530 NLVGIVI-GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI 588
++G++ G++V I+K A GA +I D T YA +GGQ+ D
Sbjct: 458 KIIGLLQEGNEVKSINKGA-----KGA--------------VILDHTPFYAESGGQVGDK 498
Query: 589 GV------AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMR 642
G+ + + TQ+ G+ +VH+G V+ ++T L +VD R
Sbjct: 499 GLLIGKEFTFQVDDTQKVGQA-----------VVHYGKVIKG-ELTLDLLIHAQVDNIRR 546
Query: 643 LGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYI 701
HT +HLL+AAL++++ Q+ V ++ DFS + E L+ + +E+ +
Sbjct: 547 DAIRLNHTATHLLHAALKKIVGQHVQQRGSLVDAERARFDFSHF-EALTPQQIQQIEEVV 605
Query: 702 NDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHV 761
N I +V + M E + + GE Y D V ++ + D S+E C GTH
Sbjct: 606 NAQIRANNEVITQVMDI-ESAKQSGAVALFGEKYSDAVRVLSMGD----FSKELCGGTHA 660
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I ++ G+R I+ +TG + A V
Sbjct: 661 RRTGDIGLFKIVAEYGIASGIRRIEMVTGRYALAWV 696
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK++FLGL Y R A +Q+C+R GGKHNDL G + HHT
Sbjct: 28 VPSNDPTLLFTNAGMVQFKDLFLGLETRSYQRAATAQRCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KR+A + A EFLT+ + +P +RL+ T
Sbjct: 88 FFEMLGNFSFGDYFKREAIQYAWEFLTE-VLHIPAERLWVT 127
>gi|418774442|ref|ZP_13330411.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|392751254|gb|EJA08209.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
Length = 876
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 254/818 (31%), Positives = 382/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G ++++I A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDQTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG L L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHLGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V DFS + E + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIREVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M + + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDLDAAKAKGAMALF-GEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|417309142|ref|ZP_12095981.1| Alanyl-tRNA synthetase [Escherichia coli PCN033]
gi|338769122|gb|EGP23903.1| Alanyl-tRNA synthetase [Escherichia coli PCN033]
Length = 876
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 260/813 (31%), Positives = 385/813 (47%), Gaps = 137/813 (16%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G + NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYVSDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNL 531
FE + E +R +A+ AS D + + YD H + N K T +D
Sbjct: 425 FEAAMEE--QRRRAREASGFG-ADYNAMIRVNSASEFKGYD-HLELNGK-VTALFVD--- 476
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-- 589
G ++D+I A V + D+T YA +GGQ+ D G
Sbjct: 477 ----------------------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGDKGEL 512
Query: 590 ----VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
++ TQ+ G+ IG + L + G+ V + +VD R
Sbjct: 513 KGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEARRARI 560
Query: 646 MRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
H+ +HL++AALR+VL T QK V DFS + E + + + AVE +N
Sbjct: 561 RLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDLVNAQ 619
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNT 764
I + ++ M E + GE Y + V ++ + D S E C GTH T
Sbjct: 620 IRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTHASRT 674
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
G I +I GVR I+ +TG+ + A V
Sbjct: 675 GDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|441495801|ref|ZP_20978040.1| Alanyl-tRNA synthetase [Fulvivirga imtechensis AK7]
gi|441440550|gb|ELR73808.1| Alanyl-tRNA synthetase [Fulvivirga imtechensis AK7]
Length = 847
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 270/874 (30%), Positives = 408/874 (46%), Gaps = 131/874 (14%)
Query: 39 IVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCVRVGGKHNDLSCAGRDSYHH 98
+V D ++ F N+GM QFK+ FLG + RVA++QKC+RV GKHNDL G D+YHH
Sbjct: 1 MVNKDDPTLMFTNAGMNQFKDYFLGNKKPVHNRVADTQKCLRVSGKHNDLEEVGLDTYHH 60
Query: 99 TFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTYFGGSDQYGLPCDEETRD 158
T FEMLGNWSF DY+K++A A E LT+ +LP DRLY T FGG L D+E D
Sbjct: 61 TMFEMLGNWSFGDYFKKEAIAWAWELLTE-VYALPKDRLYVTVFGGDKGDNLDVDQEAYD 119
Query: 159 IWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHYDMKGEPS----SALARVNADRN 214
W ++ V D I K NFWEMG TGPCG SEIH D++ E VN D
Sbjct: 120 FW-KVIVDEDRILYGSKKDNFWEMGDTGPCGPCSEIHIDLRPEEEVKKIQGKELVNNDHP 178
Query: 215 DLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLET 274
++EIWN+VF+ R ++ + L ++DTG+GFERL +Q K+S YDTD+F PL+E
Sbjct: 179 QVVEIWNLVFMEFNRQASGELKYLPAKHVDTGMGFERLCMAIQKKSSNYDTDVFTPLIEH 238
Query: 275 IEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVR 331
+ A T+ + +TD+ + R++SD+ R I A+AD P T +R ++R
Sbjct: 239 V-----ADKAKVTYGQNEQTDI--AIRVISDHVRAIAFAVADGQLPSNTGAGYVIRRILR 291
Query: 332 DALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKA 391
A+ K + EL ++ G+V+PE++ + I ++ +E F LR
Sbjct: 292 RAVRYGFTFLDFK-SPFIYELVPILSSQFGEVFPELKSQQDFIAKVIEQEEASF--LRT- 347
Query: 392 AVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYL--TKQLARDPSITEISGDMAFTLYDTY 449
L G+K L K+ + I G +AF LYDTY
Sbjct: 348 -------------------------LENGLKKLDGVKEQMKGSGEKVIEGKLAFDLYDTY 382
Query: 450 GLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKY 509
G ++ +A T+ E+F ++ + K RSKA AA K
Sbjct: 383 GFPLDLTSLIARENGFTVDVESFNTEMQKQKSRSKADAA-------------------KE 423
Query: 510 KYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVG 569
D+H + F +G + + +++ +I+ +
Sbjct: 424 TGDWHVVGDQDNIEF-----------VGYEKLISEAQVVKYR-------TIKQKGKEVYQ 465
Query: 570 LIFDKTNLYATAGGQIDDIGVAYLTNTTQENG-KVEIGELASLEGKIVHF-----GNVVS 623
++ +KT YA +GGQ+ D G YL + NG KV + + IVHF N+ +
Sbjct: 466 VVLNKTPFYAESGGQVGDQG--YL----EANGEKVTVLDTKKENDLIVHFIDKLPANLEA 519
Query: 624 SFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDF 682
FK V+ + R M H+ +HLL+AALR+VL QK V DF
Sbjct: 520 PFKAV--------VNEKKRKQTMNNHSATHLLHAALRKVLGEHVEQKGSLVNEKVLRFDF 571
Query: 683 SVYGETLSVDSVAAVEKYINDVIANQVQVD-RRHMRASELPFLTHLTVIPGEIYPDDVIL 741
S + + +S + +A V + +N+ I + +D +R++ E + + + GE Y D V +
Sbjct: 572 SHF-QKMSEEEIARVGQIVNEKIRENITLDEKRNIPIEEAKKMGAMALF-GEKYGDFVRV 629
Query: 742 IDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS-------- 793
I +V E C GTHV TG I ++ S GVR I+ +TG+++
Sbjct: 630 ITFDPGYSV---ELCGGTHVSATGAIGFFKIVSESSIAAGVRRIEAITGEAAENFINSQL 686
Query: 794 ------KAAVENGKHLSTAASFSQILNVGNIPYGDDSIAFVNSGMCQ-FKNVFLG-LTPA 845
+ ++N K L TA + +L+ N + I +++G Q K LG + A
Sbjct: 687 QLIDEVREMLKNPKDLKTAV--ASLLDQKNKL--EKEIEGIHAGQAQNLKKELLGKVKEA 742
Query: 846 PYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFF 879
RV + + G LSF R+ + F
Sbjct: 743 NGARVIIEKIKLPAGDALKTLSFELRNEVENLFL 776
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 822 DDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
D ++ F N+GM QFK+ FLG + RVA++QKC+RV GKHNDL G D+YHHT FEM
Sbjct: 6 DPTLMFTNAGMNQFKDYFLGNKKPVHNRVADTQKCLRVSGKHNDLEEVGLDTYHHTMFEM 65
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+K++A A E LT+ +LP DRLY T
Sbjct: 66 LGNWSFGDYFKKEAIAWAWELLTE-VYALPKDRLYVT 101
>gi|422800604|ref|ZP_16849101.1| alanyl-tRNA synthetase [Escherichia coli M863]
gi|323966841|gb|EGB62270.1| alanyl-tRNA synthetase [Escherichia coli M863]
Length = 876
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGVNFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|222157385|ref|YP_002557524.1| alanyl-tRNA synthetase [Escherichia coli LF82]
gi|331674208|ref|ZP_08374968.1| alanine--tRNA ligase [Escherichia coli TA280]
gi|387617964|ref|YP_006120986.1| alanyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
gi|422828071|ref|ZP_16876243.1| alanyl-tRNA synthetase [Escherichia coli B093]
gi|432603350|ref|ZP_19839592.1| alanyl-tRNA synthetase [Escherichia coli KTE66]
gi|432681300|ref|ZP_19916670.1| alanyl-tRNA synthetase [Escherichia coli KTE143]
gi|222034390|emb|CAP77132.1| alanyl-tRNA synthetase [Escherichia coli LF82]
gi|312947225|gb|ADR28052.1| alanyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
gi|331068302|gb|EGI39697.1| alanine--tRNA ligase [Escherichia coli TA280]
gi|371615511|gb|EHO03910.1| alanyl-tRNA synthetase [Escherichia coli B093]
gi|431139709|gb|ELE41487.1| alanyl-tRNA synthetase [Escherichia coli KTE66]
gi|431219499|gb|ELF16910.1| alanyl-tRNA synthetase [Escherichia coli KTE143]
Length = 876
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|452123349|ref|YP_007473597.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|451912353|gb|AGF84159.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 876
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 254/818 (31%), Positives = 382/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGEHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G ++++I A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDRTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG L L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHLGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V DFS + E + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIRQVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M + + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDLDAARAKGAMALF-GEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|293412052|ref|ZP_06654775.1| alanyl-tRNA synthetase [Escherichia coli B354]
gi|432870126|ref|ZP_20090583.1| alanyl-tRNA synthetase [Escherichia coli KTE147]
gi|291468823|gb|EFF11314.1| alanyl-tRNA synthetase [Escherichia coli B354]
gi|431409096|gb|ELG92271.1| alanyl-tRNA synthetase [Escherichia coli KTE147]
Length = 876
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|114707288|ref|ZP_01440185.1| alanyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
gi|114537169|gb|EAU40296.1| alanyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
Length = 912
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 248/792 (31%), Positives = 369/792 (46%), Gaps = 98/792 (12%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FLDYF GH V SSP+VP D ++ FVN+GM QFKNVF G Y R SQ
Sbjct: 28 IRSAFLDYFAKN-GHEKVSSSPLVPRNDPTLMFVNAGMVQFKNVFTGEEKRSYSRAVTSQ 86
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K A +A +TK LP D+
Sbjct: 87 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKDHAIELAWSLITKD-FGLPRDK 145
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
L T + D+E +W ++ G+ D I + G NFW MG TGPCG SEI
Sbjct: 146 LLVTVY--------SEDDEAAGLWKKIAGLSDDRIIRIGTSDNFWTMGETGPCGPCSEIF 197
Query: 196 YDMKGE--PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFERLV 253
+D GE P N D + IEIWN+VF+ +++++ D + L + IDTG+G ER+
Sbjct: 198 FD-HGEDIPGGPPGSPNEDGDRFIEIWNLVFMQYEQLAGDERLDLPRPSIDTGMGLERIA 256
Query: 254 TILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMITVA 313
+LQ YD DLF L+ +E G++ G S+R+++D+ R
Sbjct: 257 AVLQGVHDNYDIDLFRTLIAAVENAIGSRAEGAAVA---------SHRVIADHLRSTAFL 307
Query: 314 LADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQDS 370
+AD + P + LR ++R A+ + + + L K L IAE +G YPE
Sbjct: 308 IADGVLPSNEGRGYVLRRIMRRAMRHAR-LLGAGEPVLYKLLPTLIAE-MGRAYPE---- 361
Query: 371 INKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQLAR 430
L+ GE L+ +LE+ ++ L G+ L
Sbjct: 362 -----LVRGE-----------------ALIAETLKLEEKRFLQT--LDRGLSLLADATEG 397
Query: 431 DPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAASN 490
+ ++SG+ AF LYDTYG ++ Q+ + + + +AF N ER KA+A
Sbjct: 398 MGAGQKLSGETAFKLYDTYGFPLDLTQDALRQRGIAVDLDAF----NTAMERQKAEA--- 450
Query: 491 VPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHAIRH 550
+ + + +++ FP D +G +
Sbjct: 451 -----------------RKSWAGSGEAATEKVWFPIRDRVGATEFLGYDTEEASGSVVAL 493
Query: 551 ARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGELAS 610
+ GA + S +V + ++T Y +GGQ+ D GV T +EI +
Sbjct: 494 VQDGAEVKSATAGEKVFV--VVNQTPFYGESGGQLGDAGVMTDGETV-----IEIEDTQK 546
Query: 611 L-EGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-TCTYQ 668
L +G VH G +V S +V+ ++V+ R R H+ +HLL+ LR VL T Q
Sbjct: 547 LADGLFVHRG-IVKSGEVSVDDALDLKVEHRRRSKIRSNHSATHLLHEGLREVLGTHVAQ 605
Query: 669 KSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTHLT 728
K V + DFS + + + + AVE+ N ++ V+ R M E +
Sbjct: 606 KGSLVAPERLRFDFS-HPKPMDRAEIEAVERLANGIVRQNAPVETRLMAVDE-AIESGAM 663
Query: 729 VIPGEIYPDDVILIDISDKENV------ISREPCCGTHVFNTGHIESCTVIGYKSYNHGV 782
+ GE Y D+V ++ + + S E C GTHV TG I V+G + GV
Sbjct: 664 ALFGEKYGDEVRVVSMGTAQEGKKAGKPYSTELCGGTHVSATGEIGVVHVVGESAVGAGV 723
Query: 783 RSIKCLTGDSSK 794
R I+ LTG++++
Sbjct: 724 RRIEALTGEAAR 735
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ FVN+GM QFKNVF G Y R SQKC+R GGKHNDL G + HHT
Sbjct: 50 VPRNDPTLMFVNAGMVQFKNVFTGEEKRSYSRAVTSQKCVRAGGKHNDLDNVGYTARHHT 109
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K A +A +TK LP D+L T
Sbjct: 110 FFEMLGNFSFGDYFKDHAIELAWSLITK-DFGLPRDKLLVT 149
>gi|205830048|sp|A0K6N4.2|SYA_BURCH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 874
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 240/805 (29%), Positives = 388/805 (48%), Gaps = 126/805 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG P PY R
Sbjct: 1 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT
Sbjct: 60 ATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLT-TVYQ 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP D+L+ T + D+E DIW E+GVP + I + G NFW MG
Sbjct: 119 LPKDKLWVTVY--------QEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMG 170
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWN+VF+ R + + L
Sbjct: 171 DTGPCGPCTEIFYDHGPDVWGGPPGSP----EEDGDRYIEIWNLVFMQFNRDAQGNMTRL 226
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ERL +LQ+ S Y+ DLF L+ K R S+ T +
Sbjct: 227 PKQSVDTGMGLERLAAVLQHVHSNYEIDLFQNLI---------KAAARVTEISDLT--NN 275
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELSY 354
S ++++D+ R + + D + P + LR +VR A+ +K+ ++G +L
Sbjct: 276 SLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHG---YKLGRKGAFFHKLVA 332
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
++ +G YPE++++ E R+ D LR+ E E+F E
Sbjct: 333 DLVAEMGTAYPELKEA----------EQRVTDVLRQ--------------EEERFFETIE 368
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
G+ + L + A+ + + G++AF L+DTYG ++ ++ + +T+ AF+
Sbjct: 369 HGMSILEAALAEVEAKGGKV--LDGELAFKLHDTYGFPLDLTADVCRERGMTVDEPAFDD 426
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ ++R +A+AA K+K + + + TF
Sbjct: 427 AM--ARQREQARAAG------------------KFKATQGLEYSGAKTTFHGY------- 459
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+++ D + G++++ ++ +A V + D T YA +GGQ+ D GV L
Sbjct: 460 ---EEIAFDDAKVVALYVDGSAVNEVKAGQDAVV--VLDHTPFYAESGGQVGDQGV--LA 512
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
N + + + ++ ++ + + G R E+DA+ R R H+ +HL
Sbjct: 513 NAAT---RFAVADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHL 569
Query: 655 LNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYI-NDVIANQVQVD 712
++ ALR VL QK V +D+ DF+ + ++ D + VE+ + N+++AN +
Sbjct: 570 MHKALREVLGAHVQQKGSLVDADKTRFDFA-HNAPMTDDEIRRVEQIVNNEILANAPGIV 628
Query: 713 RRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIE 768
R +P+ + + GE Y D+V ++D+ SRE C GTHV TG I
Sbjct: 629 RV------MPYDEAVKGGAMALFGEKYGDEVRVLDLG-----FSRELCGGTHVHRTGDIG 677
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSS 793
++ G+R ++ +TGD++
Sbjct: 678 LFKIVVEGGVAAGIRRVEAITGDNA 702
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG P PY R +Q+ +R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQRSVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT LP D+L+ T
Sbjct: 88 FFEMLGNFSFGDYFKHDAIKFAWELLT-TVYQLPKDKLWVT 127
>gi|218701187|ref|YP_002408816.1| alanyl-tRNA synthetase [Escherichia coli IAI39]
gi|386625414|ref|YP_006145142.1| alanyl-tRNA synthetase [Escherichia coli O7:K1 str. CE10]
gi|218371173|emb|CAR19004.1| alanyl-tRNA synthetase [Escherichia coli IAI39]
gi|349739151|gb|AEQ13857.1| alanyl-tRNA synthetase [Escherichia coli O7:K1 str. CE10]
Length = 876
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLATGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKSEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|422767798|ref|ZP_16821524.1| alanyl-tRNA synthetase [Escherichia coli E1520]
gi|323935749|gb|EGB32063.1| alanyl-tRNA synthetase [Escherichia coli E1520]
Length = 876
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYSSDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNTQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|398353908|ref|YP_006399372.1| alanine--tRNA ligase AlaS [Sinorhizobium fredii USDA 257]
gi|390129234|gb|AFL52615.1| alanine--tRNA ligase AlaS [Sinorhizobium fredii USDA 257]
Length = 917
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 252/798 (31%), Positives = 363/798 (45%), Gaps = 108/798 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS FLDYF GH +V SSP+VP D ++ F N+GM QFKNVF GL PY A SQ
Sbjct: 37 IRSMFLDYF-RKNGHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEQRPYTTAATSQ 95
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K A +A +TK L R
Sbjct: 96 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKERAIELAWNLITKE-YGLDAKR 154
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
L T + D+E +W ++ G D I + NFW MG TGPCG SEI
Sbjct: 155 LLVTVY--------HTDDEAFGLWKKIAGFGDDRIIRIPTSDNFWAMGDTGPCGPCSEIF 206
Query: 196 YD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
YD G P SA D + IEIWN+VF+ +++++ + V L + IDTG+G E
Sbjct: 207 YDHGQQIWGGPPGSA----EEDGDRFIEIWNLVFMQYEQITKEERVDLPRPSIDTGMGLE 262
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RL +LQ + YD DLF L+ E+ +G K G D S+R+++D+ R
Sbjct: 263 RLAAVLQGQHDNYDIDLFRALIAASEEATGVKAEG---------DRRASHRVIADHLRSS 313
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+AD + P + LR ++R A+ ++ Q L+ +L + +G YPE+
Sbjct: 314 AFLIADGVLPSNEGRGYVLRRIMRRAMRHAQ--LLGAQDPLMWKLLPALVGQMGRAYPEL 371
Query: 368 QDSINKIQLILG-EESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ I L EE+R L + G+ L
Sbjct: 372 VRAEALISETLKLEETRFRKTLER-----------------------------GLNLLAD 402
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
A + G+ AF LYDTYG ++ Q+ AK +T+ +AF ++ K ++A
Sbjct: 403 ASAGLSEGDQFDGETAFKLYDTYGFPLDLTQDALRAKGITVDTDAFSVAMDRQKAEARAN 462
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDK 545
A + + F + + D+ YDT S Q D
Sbjct: 463 WAGSGEAA--TETIWFELKEKHGATDFLGYDTESAEAVI--------------QAIVRDG 506
Query: 546 HAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEI 605
+ A G S+ LI ++T Y +GGQ+ D GV E GK+ +
Sbjct: 507 AVVESATKGESVQ-----------LILNQTPFYGESGGQVGDTGV-----IATETGKLTV 550
Query: 606 GELASL-EGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL- 663
+ EG VH+G VV+ + G + + VD R H+ +HLL+ ALR VL
Sbjct: 551 NDTQKRGEGLFVHYG-VVAEGILKTGEAAALTVDHARRARLRANHSATHLLHEALREVLG 609
Query: 664 TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPF 723
T QK V + D S + + +S + + VE+ N++I V R M +
Sbjct: 610 THVAQKGSLVAPERLRFDVS-HPKPMSAEELKEVEEMANEIIVQNTPVTTRLMSVDD-AI 667
Query: 724 LTHLTVIPGEIYPDDVILIDI------SDKENVISREPCCGTHVFNTGHIESCTVIGYKS 777
+ GE Y D+V ++ + S S E C GTHV TG I V+ +
Sbjct: 668 AEGAMALFGEKYGDEVRVVAMGQGIRGSKAGKPYSVELCGGTHVSATGDIGLVRVVSESA 727
Query: 778 YNHGVRSIKCLTGDSSKA 795
GVR ++ LTG++++A
Sbjct: 728 VGAGVRRVEALTGEAARA 745
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFKNVF GL PY A SQKC+R GGKHNDL G + HHT
Sbjct: 59 VPRNDPTLMFTNAGMVQFKNVFTGLEQRPYTTAATSQKCVRAGGKHNDLDNVGYTARHHT 118
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K A +A +TK L RL T
Sbjct: 119 FFEMLGNFSFGDYFKERAIELAWNLITK-EYGLDAKRLLVT 158
>gi|225075679|ref|ZP_03718878.1| hypothetical protein NEIFLAOT_00695 [Neisseria flavescens
NRL30031/H210]
gi|224952950|gb|EEG34159.1| hypothetical protein NEIFLAOT_00695 [Neisseria flavescens
NRL30031/H210]
Length = 874
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 246/800 (30%), Positives = 391/800 (48%), Gaps = 123/800 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + +R FL +F T+GHT+V+SS +VP+ D ++ F N+GM QFK+VFLG PY R
Sbjct: 1 MKTTELRQKFLKFF-ETKGHTVVRSSSLVPHDDPTLLFTNAGMNQFKDVFLGFDKRPYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
+QKCVR GGKHNDL G + HHTFFEM+GN+SF DY+KRDA A EFLT P +
Sbjct: 60 ATTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKRDAIHFAWEFLTSPEWL 119
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEM 182
++P D+L T + D+E +IWL E+G+P + I + G NFW+M
Sbjct: 120 NIPKDKLLATVY--------AEDDEAYNIWLNEIGMPSERIVRIGDNKGAKYASDNFWQM 171
Query: 183 GSTGPCGYSSEIHYDMKGEPSSAL-ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
G TGPCG SEI YD E + D + IEIWN VF+ R + PL K
Sbjct: 172 GDTGPCGPCSEIFYDHGEEIWGGIPGSPEEDGDRWIEIWNCVFMQFNRDEQGNMNPLPKP 231
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
+DTG+G ER+ ++Q+ S Y+ DLF LL+ + + +GA P+ + S +
Sbjct: 232 SVDTGMGLERMAAVMQHVHSNYEIDLFQDLLKAVARETGA-PFSME---------EPSLK 281
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGK-LVKELSYNIA 357
+++D+ R + +AD + P + LR ++R A+ +K+ Q K +L ++
Sbjct: 282 VIADHIRSCSFLIADGVLPANEGRGYVLRRIIRRAV---RHGYKLGQSKPFFHKLVADLV 338
Query: 358 EILGDVYPEIQDSINKIQLIL-GEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
+ +GD YPE+++ +I+ L EESR L E G
Sbjct: 339 KEMGDAYPELKEKQAQIEEALKNEESRFAQTL-------------------------ETG 373
Query: 417 LVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKL 476
+ L L LA+ + G++ F LYDTYG ++ ++ + + L E F +++
Sbjct: 374 MAL----LENALAKGGKT--LGGEIIFKLYDTYGFPYDLTADICRERNIDLDEEGFNREM 427
Query: 477 NELKERSKA----KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
+ R++A KA + +P YD DT K Y+ ++ ++
Sbjct: 428 EAQRARARAAQSFKANAQLP------------------YDGQ-DTEFKGYSERQTESKVL 468
Query: 533 GIVI-GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
+ G+QV + + SGA ++ D T YA +GGQ+ D+G
Sbjct: 469 ALYKDGEQV-----NELNEGDSGA--------------VVIDFTPFYAESGGQVGDVGYI 509
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTT 651
+ + EN + E+ + ++ + V +S ++ G + +VD +R MR H+
Sbjct: 510 F----SGEN-RFEVRDTQKIKAAVFGQFGVQTSGRLKVGDSVTAKVDDEIRNANMRNHSA 564
Query: 652 SHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ 710
+HL++ ALR VL QK V ++ D S + + ++ + + VE+ +N+ + V
Sbjct: 565 THLMHKALRDVLGEHVEQKGSLVTAESTRFDIS-HPQAVTAEEITEVERRVNEAVLANVA 623
Query: 711 VDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESC 770
V+ M + E T ++ GE Y D+V ++ + S E C GTHV TG I
Sbjct: 624 VNAAIM-SMEDAQKTGAMMLFGEKYGDEVRVLQMGG----FSTELCGGTHVSRTGDIGLF 678
Query: 771 TVIGYKSYNHGVRSIKCLTG 790
+I GVR I+ +TG
Sbjct: 679 KIISEGGIAAGVRRIEAITG 698
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLG PY R +QKC+R GGKHNDL G + HHT
Sbjct: 28 VPHDDPTLLFTNAGMNQFKDVFLGFDKRPYSRATTAQKCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+KRDA A EFLT P +++P D+L T
Sbjct: 88 FFEMMGNFSFGDYFKRDAIHFAWEFLTSPEWLNIPKDKLLAT 129
>gi|432535030|ref|ZP_19772000.1| alanyl-tRNA synthetase [Escherichia coli KTE234]
gi|431059238|gb|ELD68599.1| alanyl-tRNA synthetase [Escherichia coli KTE234]
Length = 876
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 260/813 (31%), Positives = 387/813 (47%), Gaps = 145/813 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I +I GVR I+ +TG+S+
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGESA 703
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|52842026|ref|YP_095825.1| alanyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|148359345|ref|YP_001250552.1| alanyl tRNA synthetase [Legionella pneumophila str. Corby]
gi|296107392|ref|YP_003619092.1| alanyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
gi|378777661|ref|YP_005186099.1| alanyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
ATCC 43290]
gi|59798497|sp|Q5ZUJ9.1|SYA_LEGPH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830130|sp|A5ICV6.1|SYA_LEGPC RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|52629137|gb|AAU27878.1| alanyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|148281118|gb|ABQ55206.1| alanyl tRNA synthetase [Legionella pneumophila str. Corby]
gi|295649293|gb|ADG25140.1| alanyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
gi|307610501|emb|CBX00082.1| alanyl-tRNA synthetase [Legionella pneumophila 130b]
gi|364508476|gb|AEW52000.1| alanyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
ATCC 43290]
Length = 860
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 252/816 (30%), Positives = 389/816 (47%), Gaps = 150/816 (18%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR +FL+YF +GH +V SS +VP D ++ F N+GM QFK++FLGL Y R
Sbjct: 1 MKSSEIRQAFLNYFVQ-RGHQIVASSSLVPSNDPTLLFTNAGMVQFKDLFLGLETRSYQR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A +Q+CVR GGKHNDL G + HHTFFEMLGN+SF DY+KR+A + A EFLT+ +
Sbjct: 60 AATAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWEFLTE-VLH 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+P +RL+ T + D E DIWL E+ V + + G K NFW MG TGPCG
Sbjct: 119 IPAERLWVTVY--------KEDLEAEDIWLKEMKVSPERFSRCGEKDNFWSMGDTGPCGP 170
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
+EI YD G P S + D + IEIWN+VF+ R + PL K +DT
Sbjct: 171 CTEIFYDHGPEVAGGPPGSP----DEDGDRYIEIWNLVFMQFNRDREGHLHPLPKPSVDT 226
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLD---TSYRM 302
G+G ERL ++Q S Y+ D F L++ I ++ D+D TS ++
Sbjct: 227 GMGLERLAAVIQGVHSNYEIDSFQYLIKAIAQLG--------------QDIDLNHTSLKV 272
Query: 303 LSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGK-------LVKEL 352
++D+ R + + D + P + LR ++R A V+ G +L
Sbjct: 273 IADHIRSCSFLIVDGVLPSNEGRGYVLRRIIRRA---------VRHGNKLGLPSPFFSKL 323
Query: 353 SYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIM 412
+ +++GD YPE+ +S I+ IL Q E QF
Sbjct: 324 VQPLIDVMGDAYPELINSKAHIERIL------------------------QQEENQFTRT 359
Query: 413 EEPGLVL---GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L +K L Q E+SG++AF LYDTYG ++ ++ + L +
Sbjct: 360 LEQGLRLLQDHIKNLQGQ--------ELSGEVAFKLYDTYGFPIDLTADIIREQGLHIDM 411
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
EAF Q + + +E+S+A A+ D + V+ ++ ++H Y ++
Sbjct: 412 EAFNQLMQQQREQSQA-ASQFTTD-------YHAVSQLDHQSEFH------GYEKESMEA 457
Query: 530 NLVGIVI-GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI 588
++G++ G++V I+K A GA +I D T YA +GGQ+ D
Sbjct: 458 KIIGLLQEGNEVKSINKGA-----KGA--------------VILDHTPFYAESGGQVGDK 498
Query: 589 GV------AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMR 642
G+ + + TQ+ G+ +VH+G V+ ++T L +VD R
Sbjct: 499 GLLIGKEFTFQVDDTQKVGQA-----------VVHYGKVIKG-ELTLDLLIHAQVDNIRR 546
Query: 643 LGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYI 701
HT +HLL+AAL++++ Q+ V ++ DFS + E L+ + +E+ +
Sbjct: 547 DAIRLNHTATHLLHAALKKIVGQHVQQRGSLVDAERARFDFSHF-EALTPQQIQQIEEVV 605
Query: 702 NDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHV 761
N I +V + M E + + GE Y D V ++ + D S+E C GTH
Sbjct: 606 NAQIRANNEVITQVMDI-ESAKQSGAVALFGEKYSDAVRVLSMGD----FSKELCGGTHA 660
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I ++ G+R I+ +TG + A V
Sbjct: 661 RRTGDIGLFKIVAEYGIASGIRRIEMVTGRYALAWV 696
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK++FLGL Y R A +Q+C+R GGKHNDL G + HHT
Sbjct: 28 VPSNDPTLLFTNAGMVQFKDLFLGLETRSYQRAATAQRCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KR+A + A EFLT+ + +P +RL+ T
Sbjct: 88 FFEMLGNFSFGDYFKREAIQYAWEFLTE-VLHIPAERLWVT 127
>gi|418843370|ref|ZP_13398167.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|418856881|ref|ZP_13411517.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|418862499|ref|ZP_13417039.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|392816706|gb|EJA72628.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|392835766|gb|EJA91357.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|392835901|gb|EJA91490.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
Length = 876
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 254/818 (31%), Positives = 382/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G ++++I A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDQTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG L L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHLGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V DFS + E + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIRQVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M + + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDLDAARAKGAMALF-GEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|170019057|ref|YP_001724011.1| alanyl-tRNA synthetase [Escherichia coli ATCC 8739]
gi|205830085|sp|B1IUY2.1|SYA_ECOLC RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|169753985|gb|ACA76684.1| alanyl-tRNA synthetase [Escherichia coli ATCC 8739]
Length = 876
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPANENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNTQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|126726568|ref|ZP_01742409.1| alanyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
gi|126704431|gb|EBA03523.1| alanyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2150]
Length = 886
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 254/801 (31%), Positives = 375/801 (46%), Gaps = 123/801 (15%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRSSFL YF + QGH +V SSP+VP D ++ FVNSGM QFKN+F G Y R ++Q
Sbjct: 7 IRSSFLSYF-DKQGHQVVDSSPLVPRNDPTLMFVNSGMVQFKNMFTGAETRDYVRAVSAQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEM+GN+SF DY+K DA A E +TK + + +R
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMMGNFSFGDYFKEDAILFAWEMVTKV-LGIDKNR 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
LY T + D+E +IW ++ G+ D I + NFW MG TGPCG +EI
Sbjct: 125 LYVTVY--------HTDDEAANIWKKVAGLSDDRIIRIATDDNFWRMGPTGPCGPCTEIF 176
Query: 196 YD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
YD G P S D + +EIWN+VF+ + + ++ L K IDTG+G E
Sbjct: 177 YDHGEHIWGGPPGSP----EEDGDRFVEIWNLVFMQNVQHEDGSMTLLPKQSIDTGMGIE 232
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +LQ Y TDL L+E + + P G T +R+++D+ R
Sbjct: 233 RVAALLQGTNDNYSTDLMRSLIEASANETSSDPDGAG---------KTHHRVIADHLRST 283
Query: 311 TVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ LAD + P + LR ++R A LL ++D L+ L + +G
Sbjct: 284 SFLLADGVMPSNDGRGYVLRRIMRRAMRHAHLLGAKD-------PLMHRLVPALVSQMGA 336
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+Q + + I L +E F + LE+ G++
Sbjct: 337 AYPELQQAQSLITETLKQEETRF-----------------KQTLER-----------GLR 368
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L ++A ++SG AF LYDT+G ++ Q+ K L + + F+ + E K +
Sbjct: 369 LLDDEVAGLGEGADLSGSAAFKLYDTFGFPLDLTQDALREKGLGVDKDGFDAAMAEQKAK 428
Query: 483 SKAK--AASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQ 539
++A D L F + D+ D+ YDT V Q
Sbjct: 429 ARAAWVGTGETADASLW----FDIADEHGVTDFLGYDTE----------------VAEGQ 468
Query: 540 VFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQE 599
V + K G S+D+ + + V ++ ++T YA +GGQI D G
Sbjct: 469 VLALIK-------DGVSVDATIVGDS--VQIVMNQTPFYAESGGQIGDAGT-----LKTA 514
Query: 600 NGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA-HTTSHLLNAA 658
NG VE+ + G +H G VVS V+ + + VD R G +RA H+ +HLL+ A
Sbjct: 515 NGLVEVTDTRKNAGLFIHHGKVVSG-TVSKDEAAELVVD-HARRGAIRANHSATHLLHEA 572
Query: 659 LRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMR 717
LR L Q+ +D DFS + +S D + VE+ +N I +V+ R M
Sbjct: 573 LRGALGDHVSQRGSLNAADRLRFDFS-HNAAISQDDLRKVEEEVNAYIRQNTEVETRIMT 631
Query: 718 ASELPFLTHLTVIPGEIYPDDVILIDISDKEN--------VISREPCCGTHVFNTGHIES 769
+ L + GE Y D+V ++ + + S E C GTHV TG I +
Sbjct: 632 PDDARALGAQALF-GEKYGDEVRVVSMGQQSGSGKGANGETYSLELCGGTHVGQTGDIGT 690
Query: 770 CTVIGYKSYNHGVRSIKCLTG 790
++G + + GVR I+ LTG
Sbjct: 691 FVILGDSASSAGVRRIEALTG 711
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ FVNSGM QFKN+F G Y R ++QKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFVNSGMVQFKNMFTGAETRDYVRAVSAQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEM+GN+SF DY+K DA A E +TK + + +RLY T
Sbjct: 89 FFEMMGNFSFGDYFKEDAILFAWEMVTK-VLGIDKNRLYVT 128
>gi|56414779|ref|YP_151854.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197363707|ref|YP_002143344.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|59798481|sp|Q5PF17.1|SYA_SALPA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|56129036|gb|AAV78542.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197095184|emb|CAR60735.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
Length = 876
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 254/818 (31%), Positives = 383/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+ET +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDETYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEV 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G ++++I A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDQTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG + L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHIGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V DFS + E + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIRQVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M + + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDLDAAKAKGAMALF-GEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|16766133|ref|NP_461748.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|168245264|ref|ZP_02670196.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168464053|ref|ZP_02697970.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194443356|ref|YP_002042068.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194450006|ref|YP_002046787.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197264802|ref|ZP_03164876.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|374981458|ref|ZP_09722785.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|378446184|ref|YP_005233816.1| AlaRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|378451563|ref|YP_005238923.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378700739|ref|YP_005182696.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378985416|ref|YP_005248572.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|378990152|ref|YP_005253316.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|379702079|ref|YP_005243807.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|383497502|ref|YP_005398191.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|386592516|ref|YP_006088916.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|418760331|ref|ZP_13316488.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|418764694|ref|ZP_13320789.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|418773020|ref|ZP_13329012.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|418779570|ref|ZP_13335469.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|418783881|ref|ZP_13339725.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|418787833|ref|ZP_13343632.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|418793504|ref|ZP_13349233.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|418799220|ref|ZP_13354887.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|418800549|ref|ZP_13356200.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|418806019|ref|ZP_13361593.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|418809924|ref|ZP_13365467.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|418816042|ref|ZP_13371536.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|418823625|ref|ZP_13379032.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|418829909|ref|ZP_13384873.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|418836846|ref|ZP_13391728.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|418841833|ref|ZP_13396648.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|418847802|ref|ZP_13402543.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|418852649|ref|ZP_13407348.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|418867304|ref|ZP_13421763.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|419731890|ref|ZP_14258798.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419735512|ref|ZP_14262385.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419737099|ref|ZP_14263923.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419741681|ref|ZP_14268359.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419748188|ref|ZP_14274687.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|419787855|ref|ZP_14313557.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|419793529|ref|ZP_14319150.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|421569892|ref|ZP_16015588.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421575116|ref|ZP_16020730.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421580457|ref|ZP_16026015.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421584143|ref|ZP_16029653.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|422027037|ref|ZP_16373383.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422032071|ref|ZP_16378188.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427553706|ref|ZP_18928682.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427571262|ref|ZP_18933399.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427591970|ref|ZP_18938198.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427615169|ref|ZP_18943082.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427639399|ref|ZP_18947964.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427657058|ref|ZP_18952713.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427662369|ref|ZP_18957674.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427675894|ref|ZP_18962491.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|20532254|sp|Q8ZMK6.1|SYA_SALTY RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|16421372|gb|AAL21707.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|194402019|gb|ACF62241.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194408310|gb|ACF68529.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|195633250|gb|EDX51664.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197243057|gb|EDY25677.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|205335995|gb|EDZ22759.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|261247963|emb|CBG25796.1| AlaRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267994942|gb|ACY89827.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301159387|emb|CBW18905.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312913845|dbj|BAJ37819.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321223380|gb|EFX48446.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323131178|gb|ADX18608.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|332989699|gb|AEF08682.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|380464323|gb|AFD59726.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|381290521|gb|EIC31785.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381293836|gb|EIC34976.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381307138|gb|EIC48004.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381314942|gb|EIC55707.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|381315048|gb|EIC55811.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|383799557|gb|AFH46639.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|392616888|gb|EIW99316.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|392618791|gb|EIX01183.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|392730277|gb|EIZ87522.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|392742439|gb|EIZ99527.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|392742959|gb|EJA00037.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|392751983|gb|EJA08926.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|392756165|gb|EJA13063.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|392764194|gb|EJA20996.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392764627|gb|EJA21425.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|392764742|gb|EJA21536.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|392782652|gb|EJA39283.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|392783423|gb|EJA40044.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|392783688|gb|EJA40303.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|392785616|gb|EJA42187.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|392790645|gb|EJA47139.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|392799968|gb|EJA56207.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|392802703|gb|EJA58912.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|392807903|gb|EJA63966.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|392824309|gb|EJA80096.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|392829053|gb|EJA84737.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|392839437|gb|EJA94977.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|402520213|gb|EJW27567.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402522768|gb|EJW30088.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402525928|gb|EJW33210.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402531483|gb|EJW38694.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|414015292|gb|EKS99108.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414016286|gb|EKT00059.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414016974|gb|EKT00724.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414029536|gb|EKT12693.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414031083|gb|EKT14158.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414034613|gb|EKT17538.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414044461|gb|EKT26903.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414044990|gb|EKT27417.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414050199|gb|EKT32380.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414057442|gb|EKT39196.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
Length = 876
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 254/818 (31%), Positives = 382/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G ++++I A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDQTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG L L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHLGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V DFS + E + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIREVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M + + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDLDAAKAKGAMALF-GEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|437696160|ref|ZP_20822377.1| alanyl-tRNA ligase, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435277086|gb|ELO55044.1| alanyl-tRNA ligase, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
Length = 751
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 252/814 (30%), Positives = 381/814 (46%), Gaps = 139/814 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQAEGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
FE + E + R++ +A+ D + M D+ S+ + L+ N
Sbjct: 424 GFEAAMEEQRRRAR-EASGFGADYNAM---------------IRVDSASEFKGYDHLELN 467
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD--- 587
G V +D G ++++I A V + D+T YA +GGQ+ D
Sbjct: 468 --GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDQTPFYAESGGQVGDKGE 511
Query: 588 ---IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLG 644
G + + TQ+ G+ IG L L + G+ V + +VD R
Sbjct: 512 LKGAGFTFAVDDTQKYGQA-IGHLGKLSAGALKVGDAVQA-----------DVDEARRAR 559
Query: 645 CMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIND 703
H+ +HL++AALR+VL T QK V DFS + E + + VE +N
Sbjct: 560 IRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIREVEDLVNA 618
Query: 704 VIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFN 763
I + ++ M + + GE Y + V ++ + D S E C GTH
Sbjct: 619 QIRRNLPIETNIMDLDAAKAKGAMALF-GEKYDERVRVLSMGD----FSTELCGGTHASR 673
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I G+R I+ +TG+ + A V
Sbjct: 674 TGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|149378261|ref|ZP_01895973.1| alanyl-tRNA synthetase [Marinobacter algicola DG893]
gi|149357458|gb|EDM45968.1| alanyl-tRNA synthetase [Marinobacter algicola DG893]
Length = 876
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 253/803 (31%), Positives = 378/803 (47%), Gaps = 127/803 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + +R +FLDYF QGHT+V SS +VP D ++ F N+GM QFK+VFLG Y R
Sbjct: 1 MKTAELRQAFLDYF-KQQGHTIVPSSSLVPADDPTLLFTNAGMNQFKDVFLGREKRDYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
+QKCVR GGKHNDL G + HHTFFEMLGN+SF DY+KR+A A FLT +
Sbjct: 60 ATTTQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAINFAWTFLTGDDWL 119
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEM 182
LP ++L+ T + D+E DIW E+GVP D I + G NFW+M
Sbjct: 120 KLPKEKLWVTVY--------ASDDEAFDIWNQEVGVPADRIVRIGDNKGAPYASDNFWQM 171
Query: 183 GSTGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVP 237
G TGPCG +EI YD G P S D + IEIWN+VF+ + R + ++P
Sbjct: 172 GDTGPCGPCTEIFYDHGPDVAGGPPGSP----EEDGDRYIEIWNVVFMQYNRQADGEMLP 227
Query: 238 LSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLD 297
L K +DTG+G ER+ +LQ S Y+ DL LL + G TT +
Sbjct: 228 LPKPSVDTGMGLERITAVLQGVHSNYEIDLMQDLLNAASDILGG-----VETT------E 276
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGK---LVKELSY 354
S R+++D+ R ++D + P + + R V ++ K G +L+
Sbjct: 277 ASLRVVADHIRSCAFLISDGVMP--SNEGRGFVLRRIIRRAARHGNKLGATQPFFHKLTG 334
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
+ E++GD +P++ S +I+ +L +E EQF +
Sbjct: 335 ALVELMGDAFPQLVSSRKQIEKVLLQEE------------------------EQFAKTLD 370
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
GL L L + +A S +EI GD FTLYDTYG ++ ++A + LTL ++ +E+
Sbjct: 371 KGLRL----LEQDIAALES-SEIPGDTIFTLYDTYGFPVDLTNDIARERGLTLDYDGYEK 425
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ ++R +A+AAS K+ DY N G+
Sbjct: 426 AME--RQRERARAAS------------------KFGMDY----------------NAAGL 449
Query: 535 VI-GDQVFC----IDKH-AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI 588
I G F ID H IR G + Q A L+ ++T YA +GGQ+ D
Sbjct: 450 NIEGSTEFTGYEHIDGHETIRTVIVGGEEKAAQAGDEAI--LVLERTPFYAESGGQVGDT 507
Query: 589 GVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA 648
G+ T G+ ++ + +H G V+ ++ PGL +D R +
Sbjct: 508 GL-----LTWSGGRFKVTDTQKEGSNHLHIGTVIEG-ELFPGLEVDARIDHARRERTKKN 561
Query: 649 HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAN 707
H+ +HL++AALR VL QK V D+ DFS + E ++ + + +E+ +N+ I +
Sbjct: 562 HSATHLMHAALRNVLGEHVTQKGSLVDPDKLRFDFSHF-EAVTPEQLREIERQVNEQILD 620
Query: 708 QVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHI 767
V+ + E + GE Y D V ++ + + S E C GTHV TG I
Sbjct: 621 NTPVE-TEITDMEQAQAKGAMALFGEKYGDTVRVLSMG--SDAYSVELCGGTHVARTGDI 677
Query: 768 ESCTVIGYKSYNHGVRSIKCLTG 790
+ + GVR I+ +TG
Sbjct: 678 GLFRITSESGISSGVRRIEAVTG 700
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLG Y R +QKC+R GGKHNDL G + HHT
Sbjct: 28 VPADDPTLLFTNAGMNQFKDVFLGREKRDYSRATTTQKCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+KR+A A FLT + LP ++L+ T
Sbjct: 88 FFEMLGNFSFGDYFKREAINFAWTFLTGDDWLKLPKEKLWVT 129
>gi|191171366|ref|ZP_03032915.1| alanyl-tRNA synthetase [Escherichia coli F11]
gi|190908300|gb|EDV67890.1| alanyl-tRNA synthetase [Escherichia coli F11]
Length = 876
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|238909593|ref|ZP_04653430.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
Length = 876
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 254/818 (31%), Positives = 382/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G ++++I A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDQTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG L L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHLGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V DFS + E + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIREVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M + + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDLDAARAKGAMALF-GEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|387902001|ref|YP_006332340.1| alanyl-tRNA synthetase [Burkholderia sp. KJ006]
gi|387576893|gb|AFJ85609.1| Alanyl-tRNA synthetase [Burkholderia sp. KJ006]
Length = 874
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 242/806 (30%), Positives = 385/806 (47%), Gaps = 128/806 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG PY R
Sbjct: 1 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDQRPYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HHTFFEMLGN+SF DY+K DA R A E LT
Sbjct: 60 ATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLT-TVYQ 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP D+L+ T + D+E DIW E+GVP + I + G NFW MG
Sbjct: 119 LPKDKLWVTVY--------QEDDEAYDIWAKEVGVPAERIIRIGDNKGARYASDNFWTMG 170
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWN+VF+ R + + L
Sbjct: 171 DTGPCGPCTEIFYDHGPDVWGGPPGSP----EEDGDRYIEIWNLVFMQFNRDAQGNMTRL 226
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ERL +LQ+ S Y+ DLF L++ +V+ DL+
Sbjct: 227 PKQSVDTGMGLERLAAVLQHVHSNYEIDLFQNLIKAAARVT------------ETADLNN 274
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELS 353
S ++++D+ R + + D + P + LR +VR A+ +K+ ++G +L
Sbjct: 275 NSLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHG---YKLGRKGAFFHKLV 331
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
++ +G YPE++++ E R+ D LR+ E E+F
Sbjct: 332 ADLVAEMGAAYPELKEA----------EQRVTDVLRQ--------------EEERFFETI 367
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
E G+ + L A+ + + G++AF L+DTYG ++ ++ + +T+ AF+
Sbjct: 368 EHGMSILEAALADVEAKGGKV--LDGELAFKLHDTYGFPLDLTADVCRERGMTVDEPAFD 425
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
+ ++R +A+AA K+K + + TF
Sbjct: 426 DAM--ARQREQARAAG------------------KFKATQGLEYTGAKTTFHGY------ 459
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
+++ D + G+S+ ++ +A V + D T YA +GGQ+ D GV L
Sbjct: 460 ----EEIAFDDAKVVALYVEGSSVGEVKAGQDAVV--VLDHTPFYAESGGQVGDQGV--L 511
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
N + + + ++ ++ + + G R E+DA+ R R H+ +H
Sbjct: 512 ANAAT---RFAVADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATH 568
Query: 654 LLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIND-VIANQVQV 711
L++ ALR VL QK V +D+ DF+ + L+ D + VE+ +ND ++AN +
Sbjct: 569 LMHKALREVLGAHVQQKGSLVDADKTRFDFA-HNAPLTDDEIRRVEQIVNDEILANAPGI 627
Query: 712 DRRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHI 767
R +P+ + + GE Y D+V ++D+ SRE C GTHV TG I
Sbjct: 628 VRV------MPYDEAVKGGAMALFGEKYGDEVRVLDLG-----FSRELCGGTHVQRTGDI 676
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSS 793
++ G+R ++ +TGD++
Sbjct: 677 GLFKIVVEGGVAAGIRRVEAITGDNA 702
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG PY R +Q+ +R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLMFTNSGMVQFKDVFLGTDQRPYTRATTAQRSVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA R A E LT LP D+L+ T
Sbjct: 88 FFEMLGNFSFGDYFKHDAIRFAWELLT-TVYQLPKDKLWVT 127
>gi|432617857|ref|ZP_19853967.1| alanyl-tRNA synthetase [Escherichia coli KTE75]
gi|431152749|gb|ELE53675.1| alanyl-tRNA synthetase [Escherichia coli KTE75]
Length = 876
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 260/813 (31%), Positives = 384/813 (47%), Gaps = 137/813 (16%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNL 531
FE + E +R +A+ AS D + + YD H + N K T +D
Sbjct: 425 FEAAMEE--QRRRAREASGFG-ADYNAMIRVNSASEFKGYD-HLELNGK-VTALFVD--- 476
Query: 532 VGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-- 589
G ++D+I A V + D+T YA +GGQ+ D G
Sbjct: 477 ----------------------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGDKGEL 512
Query: 590 ----VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGC 645
++ TQ+ G+ IG + L + G+ V + +VD R
Sbjct: 513 KGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEARRARI 560
Query: 646 MRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 704
H+ +HL++AALR+VL T QK V DFS + E + + + AVE +N
Sbjct: 561 RLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDLVNAQ 619
Query: 705 IANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNT 764
I + ++ M E + GE Y + V ++ + D S E C GTH T
Sbjct: 620 IRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTHASRT 674
Query: 765 GHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
G I +I GVR I+ +TG+ + A V
Sbjct: 675 GDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|170765841|ref|ZP_02900652.1| alanyl-tRNA synthetase [Escherichia albertii TW07627]
gi|170124987|gb|EDS93918.1| alanyl-tRNA synthetase [Escherichia albertii TW07627]
Length = 876
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 259/817 (31%), Positives = 386/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFG 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q ++ + ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQALV------------------EQVLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ L G V +D G ++D I A V + D+T YA +GGQ+ D
Sbjct: 465 E--LSGKVT---ALFVD---------GKAVDVINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L ++ G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLNVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFGLPKERLWVT 131
>gi|170682603|ref|YP_001744844.1| alanyl-tRNA synthetase [Escherichia coli SMS-3-5]
gi|432442120|ref|ZP_19684458.1| alanyl-tRNA synthetase [Escherichia coli KTE189]
gi|432447225|ref|ZP_19689523.1| alanyl-tRNA synthetase [Escherichia coli KTE191]
gi|433014935|ref|ZP_20203274.1| alanyl-tRNA synthetase [Escherichia coli KTE104]
gi|433024508|ref|ZP_20212487.1| alanyl-tRNA synthetase [Escherichia coli KTE106]
gi|433322487|ref|ZP_20399930.1| alanyl-tRNA ligase [Escherichia coli J96]
gi|205830086|sp|B1LQ15.1|SYA_ECOSM RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|170520321|gb|ACB18499.1| alanyl-tRNA synthetase [Escherichia coli SMS-3-5]
gi|430965368|gb|ELC82789.1| alanyl-tRNA synthetase [Escherichia coli KTE189]
gi|430972071|gb|ELC89069.1| alanyl-tRNA synthetase [Escherichia coli KTE191]
gi|431529252|gb|ELI05954.1| alanyl-tRNA synthetase [Escherichia coli KTE104]
gi|431533732|gb|ELI10225.1| alanyl-tRNA synthetase [Escherichia coli KTE106]
gi|432348993|gb|ELL43435.1| alanyl-tRNA ligase [Escherichia coli J96]
Length = 876
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLATGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|421886006|ref|ZP_16317187.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|379984321|emb|CCF89460.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
Length = 876
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 254/818 (31%), Positives = 382/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G ++++I A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDQTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG + L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHIGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V DFS + E + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIRQVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M E + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|407714237|ref|YP_006834802.1| alanyl-tRNA synthetase [Burkholderia phenoliruptrix BR3459a]
gi|407236421|gb|AFT86620.1| alanyl-tRNA synthetase [Burkholderia phenoliruptrix BR3459a]
Length = 874
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 247/813 (30%), Positives = 393/813 (48%), Gaps = 142/813 (17%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG PY R
Sbjct: 1 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAESRPYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HHTFFEMLGN+SF DY+KRDA A E LT
Sbjct: 60 ATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTGV-YQ 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP ++L+ T + D+E DIW E+GVP + I + G NFW+M
Sbjct: 119 LPKEKLWVTVY--------QEDDEAHDIWAKEVGVPVERIIRIGDNKGARYASDNFWQMA 170
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG SEI YD G P S D + IEIWN+VF+ R + + PL
Sbjct: 171 DTGPCGPCSEIFYDHGPEVWGGPPGSP----EEDGDRYIEIWNLVFMQFNRDAQGNMTPL 226
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S Y+ DLF L++ + A+ G + T+N
Sbjct: 227 PKQCVDTGMGLERIAAVLQHVHSNYEIDLFQALIK-----AAARETGVSDLTNN------ 275
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELSY 354
S ++++D+ R + + D + P + LR +VR A+ +K+ K+G +
Sbjct: 276 SLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAI---RHGYKLGKKGSFFHRMVA 332
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
++ E +G YPE++D+ + R+ D LR+ E E+F E
Sbjct: 333 DLVEQMGSAYPELKDA----------QQRVTDVLRQ--------------EEERFLETIE 368
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
G+ + ++ +L + T + G++AF L+DTYG ++ ++ +++T+ AF++
Sbjct: 369 HGMSI-LENALAELEKKGGKT-LDGELAFKLHDTYGFPLDLTADVCREREVTVDEAAFDE 426
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ ++R +A+AA K+K + + + TF
Sbjct: 427 AM--ARQREQARAAG------------------KFKMAQGLEYSGAKTTFHGY------- 459
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+++ D + GAS+ + A V + D T YA +GGQ+ D G+ L
Sbjct: 460 ---EEIVFDDAKVVALYVDGASVQEVAQGQQAVV--VLDHTPFYAESGGQVGDQGL--LA 512
Query: 595 NTTQENGKVE--------IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCM 646
N + V+ +G +LE + G+VV + E+DA R
Sbjct: 513 NASVRFAVVDTLKVQADVVGHHGTLEQGTLKVGDVV-----------KAEIDAVRRARTA 561
Query: 647 RAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DV 704
R H+ +HL++ ALR VL + QK V D+ DF+ + ++ + + VE+ +N +V
Sbjct: 562 RNHSATHLMHKALREVLGSHVQQKGSLVDPDKTRFDFA-HNAPMTDEQIRRVEEIVNAEV 620
Query: 705 IANQVQVDRRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+AN + R +PF + + GE Y D+V ++D+ SRE C GTH
Sbjct: 621 LANAPGIVRV------MPFDEAVKGGAMALFGEKYGDEVRVLDLG-----FSRELCGGTH 669
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
V TG I ++ G+R ++ +TGD++
Sbjct: 670 VHRTGDIGLFKIVMEGGVAAGIRRVEAITGDNA 702
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG PY R +Q+ +R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLLFTNSGMVQFKDVFLGAESRPYSRATTAQRSVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA A E LT LP ++L+ T
Sbjct: 88 FFEMLGNFSFGDYFKRDAIHYAWELLTG-VYQLPKEKLWVT 127
>gi|406916500|gb|EKD55512.1| hypothetical protein ACD_60C00004G0022 [uncultured bacterium]
Length = 863
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 255/818 (31%), Positives = 389/818 (47%), Gaps = 144/818 (17%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP 70
+L + IR FL+YF Q H +VKSS +VP D ++ F N+GM QFK+VFLG PY
Sbjct: 5 KLSANQIRHLFLEYF-REQHHEIVKSSSLVPSNDPTLLFTNAGMVQFKDVFLGNEKRPYQ 63
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R A+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA R A EFLT+ +
Sbjct: 64 RAASSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIRFAWEFLTRV-L 122
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
L +L+ T + D+E DIWL E+ + + G NFW MG TGPCG
Sbjct: 123 KLSPKKLWVTVY--------EEDDEAADIWLNEIKIDPARFTRCGEHSNFWSMGPTGPCG 174
Query: 190 YSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
+EI YD + G P S + D + +EIWN+VF+ + R S ++ L K +D
Sbjct: 175 SCTEIFYDHGPDIVGGPPGSH----DEDGDRYVEIWNLVFMQYDRTSDGSLTKLPKPSVD 230
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-DTSYRML 303
TG+G ER+ ++Q + YDTDLF L++ I K++ K DL TS R++
Sbjct: 231 TGMGLERITAVMQGVHNNYDTDLFQGLIKCIAKLTHTK------------DLTHTSLRVI 278
Query: 304 SDYSRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQG-------KLVKELSYNI 356
+D+ R + D + P R V ++ K G KLVK L +
Sbjct: 279 ADHIRSCAFLMTDGVAPSNEG--RGYVLRRIIRRALRHGHKLGLSKPFFFKLVKPL---V 333
Query: 357 AEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
AE +GD YPE+Q + ++ IL +E EQF++ G
Sbjct: 334 AE-MGDAYPELQKAQLHVEKILKQEE------------------------EQFSVTLSQG 368
Query: 417 LVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKL 476
L L +++ + + T I G F LYDTYG ++ +++A + L + E FE ++
Sbjct: 369 L-----KLFEEVVSELAGTLIPGSTVFKLYDTYGFPLDLTRDMARERNLHIDLEGFETEM 423
Query: 477 NELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI-- 534
+ +ERS+ D K+D Y T S + P T +G
Sbjct: 424 TKQRERSR----------------------DASKFDADYQTVSADH--PA--TEFIGYKN 457
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV---- 590
++ +++ I R G +++ ++ V I D+T+ YA +GGQ+ D G+
Sbjct: 458 LLAEKILE-KSQVIALYRDGKTVEILKAGEKGSV--ILDQTSFYAESGGQVGDQGLLQTS 514
Query: 591 --AYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA 648
+ N TQ+ G+ L I+ G + ++ P VDA+ R +
Sbjct: 515 DSVFEVNDTQKQGQT------YLHLGILKKGELAIGDQILP------IVDAKRRAATVLN 562
Query: 649 HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIA 706
HT +HLL+ LR++L T QK V + DFS + L+ D + +EK +N ++ A
Sbjct: 563 HTATHLLHMVLRKILGTHVIQKGSLVEPERLRFDFS-HSSPLTSDEIKKIEKEVNAEIRA 621
Query: 707 NQVQVDR-----RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHV 761
+ V R +++ L E Y D V ++ + S E C GTH
Sbjct: 622 DHASVVRITNPKEAIQSGALGLFE-------EKYGDKVRVVKFGE-----SVELCGGTHA 669
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN 799
+TG I ++ + G+R I+ +TG+ + +EN
Sbjct: 670 HHTGEIGIFKIVSESGVSAGIRRIEAVTGEGALEWLEN 707
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLG PY R A+SQ+C+R GGKHNDL G + HHT
Sbjct: 33 VPSNDPTLLFTNAGMVQFKDVFLGNEKRPYQRAASSQRCVRAGGKHNDLENVGYTARHHT 92
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K+DA R A EFLT+ + L +L+ T
Sbjct: 93 FFEMLGNFSFGDYFKQDAIRFAWEFLTR-VLKLSPKKLWVT 132
>gi|15832808|ref|NP_311581.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|168749982|ref|ZP_02775004.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
gi|168755438|ref|ZP_02780445.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
gi|168762908|ref|ZP_02787915.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
gi|168768784|ref|ZP_02793791.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
gi|168774775|ref|ZP_02799782.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
gi|168778675|ref|ZP_02803682.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
gi|168800226|ref|ZP_02825233.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
gi|194433071|ref|ZP_03065354.1| alanyl-tRNA synthetase [Shigella dysenteriae 1012]
gi|195938445|ref|ZP_03083827.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
gi|208805868|ref|ZP_03248205.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
gi|208813761|ref|ZP_03255090.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
gi|208818286|ref|ZP_03258606.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
gi|209398791|ref|YP_002272160.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
gi|217327497|ref|ZP_03443580.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
gi|254794638|ref|YP_003079475.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
gi|291284024|ref|YP_003500842.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
gi|387508049|ref|YP_006160305.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
gi|387883880|ref|YP_006314182.1| alanyl-tRNA synthetase [Escherichia coli Xuzhou21]
gi|416776800|ref|ZP_11874834.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
gi|416788228|ref|ZP_11879760.1| alanyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
gi|416800193|ref|ZP_11884672.1| alanyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
gi|416810758|ref|ZP_11889436.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97]
gi|416821473|ref|ZP_11894087.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
gi|416831835|ref|ZP_11899182.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
gi|419087709|ref|ZP_13633062.1| alanyl-tRNA synthetase [Escherichia coli DEC4B]
gi|419105221|ref|ZP_13650348.1| alanyl-tRNA synthetase [Escherichia coli DEC4E]
gi|419127318|ref|ZP_13672196.1| alanyl-tRNA synthetase [Escherichia coli DEC5C]
gi|425139672|ref|ZP_18540054.1| alanine--tRNA ligase [Escherichia coli 10.0833]
gi|425238064|ref|ZP_18631784.1| alanine--tRNA ligase [Escherichia coli TT12B]
gi|425295965|ref|ZP_18686161.1| alanine--tRNA ligase [Escherichia coli PA38]
gi|425361679|ref|ZP_18747327.1| alanine--tRNA ligase [Escherichia coli EC1856]
gi|428985045|ref|ZP_19054441.1| alanine--tRNA ligase [Escherichia coli 93.0055]
gi|429074485|ref|ZP_19137738.1| alanine--tRNA ligase [Escherichia coli 99.0678]
gi|445008407|ref|ZP_21324646.1| alanine--tRNA ligase [Escherichia coli PA47]
gi|445013510|ref|ZP_21329617.1| alanine--tRNA ligase [Escherichia coli PA48]
gi|445046493|ref|ZP_21361743.1| alanine--tRNA ligase [Escherichia coli 3.4880]
gi|445057768|ref|ZP_21372626.1| alanine--tRNA ligase [Escherichia coli 99.0670]
gi|452969481|ref|ZP_21967708.1| alanyl-tRNA ligase [Escherichia coli O157:H7 str. EC4009]
gi|20532246|sp|Q8X3W8.2|SYA_ECO57 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|13363025|dbj|BAB36977.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|187769613|gb|EDU33457.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
gi|188015823|gb|EDU53945.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
gi|189003197|gb|EDU72183.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
gi|189357241|gb|EDU75660.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
gi|189362083|gb|EDU80502.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
gi|189366853|gb|EDU85269.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
gi|189377449|gb|EDU95865.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
gi|194418798|gb|EDX34884.1| alanyl-tRNA synthetase [Shigella dysenteriae 1012]
gi|208725669|gb|EDZ75270.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
gi|208735038|gb|EDZ83725.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
gi|208738409|gb|EDZ86091.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
gi|209160191|gb|ACI37624.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
gi|217319864|gb|EEC28289.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
gi|254594038|gb|ACT73399.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
gi|290763897|gb|ADD57858.1| Alanyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
gi|320640339|gb|EFX09878.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
gi|320645886|gb|EFX14867.1| alanyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
gi|320651186|gb|EFX19621.1| alanyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
gi|320656736|gb|EFX24624.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320662279|gb|EFX29676.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
gi|320667330|gb|EFX34288.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
gi|374360043|gb|AEZ41750.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
gi|377928983|gb|EHU92883.1| alanyl-tRNA synthetase [Escherichia coli DEC4B]
gi|377946401|gb|EHV10081.1| alanyl-tRNA synthetase [Escherichia coli DEC4E]
gi|377973037|gb|EHV36381.1| alanyl-tRNA synthetase [Escherichia coli DEC5C]
gi|386797338|gb|AFJ30372.1| alanyl-tRNA synthetase [Escherichia coli Xuzhou21]
gi|408153813|gb|EKH82183.1| alanine--tRNA ligase [Escherichia coli TT12B]
gi|408216375|gb|EKI40703.1| alanine--tRNA ligase [Escherichia coli PA38]
gi|408276030|gb|EKI95963.1| alanine--tRNA ligase [Escherichia coli EC1856]
gi|408577740|gb|EKK53290.1| alanine--tRNA ligase [Escherichia coli 10.0833]
gi|427240883|gb|EKW08329.1| alanine--tRNA ligase [Escherichia coli 93.0055]
gi|427326959|gb|EKW88360.1| alanine--tRNA ligase [Escherichia coli 99.0678]
gi|444622150|gb|ELV96114.1| alanine--tRNA ligase [Escherichia coli PA47]
gi|444623119|gb|ELV97054.1| alanine--tRNA ligase [Escherichia coli PA48]
gi|444658799|gb|ELW31236.1| alanine--tRNA ligase [Escherichia coli 3.4880]
gi|444668923|gb|ELW40921.1| alanine--tRNA ligase [Escherichia coli 99.0670]
Length = 876
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 259/813 (31%), Positives = 387/813 (47%), Gaps = 145/813 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G +++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFVVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I +I GVR I+ +TG+ +
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGA 703
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|422331684|ref|ZP_16412699.1| alanyl-tRNA synthetase [Escherichia coli 4_1_47FAA]
gi|373247277|gb|EHP66723.1| alanyl-tRNA synthetase [Escherichia coli 4_1_47FAA]
Length = 876
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 263/817 (32%), Positives = 387/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKGRLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IGVAYLTN------TTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G TN TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGTNFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKGRLWVT 131
>gi|416220129|ref|ZP_11625221.1| alanyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
gi|326566717|gb|EGE16856.1| alanyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
Length = 887
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 253/822 (30%), Positives = 394/822 (47%), Gaps = 136/822 (16%)
Query: 21 FLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCVR 80
L +F + Q HT V SS ++P+ D ++ F N+GM QFK+ FLGL Y R +SQKCVR
Sbjct: 7 LLTFFVSKQ-HTHVPSSSLIPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVRAVSSQKCVR 65
Query: 81 VGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYF 139
GGKHNDL G + HHTFFEMLGN+SF DY+K+DA A EFLT ++LP DRLY
Sbjct: 66 AGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWLALPKDRLYV 125
Query: 140 TYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMGSTGPCGYS 191
T + D+E DIW ++G+P++ I G NFW MG TGPCG
Sbjct: 126 TVY--------HTDDEAFDIWHKDIGLPQERIIAIGDNKGGAYQSDNFWMMGDTGPCGPC 177
Query: 192 SEIHYDMKGEPSSALARV-NADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
+EI YD L + D + IEIWN VF+ R T+ PL K +DTG+G E
Sbjct: 178 TEIFYDHGEHIWGGLPGTPDEDGDRYIEIWNCVFMQFNRQKDGTMQPLPKPSVDTGMGLE 237
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ I+Q Y+TD+F L+ + G T + S ++L+D+ R +
Sbjct: 238 RISAIMQGVHGNYETDIFTKLMTKAVNIIG-------LPTDTDIQNEPSLKVLADHIRSV 290
Query: 311 TVALADNMFPDATAK---LRNVVRDAL-----LISEDVFKVKQGKLVKELSYNIAEILGD 362
+AD + P + LR ++R A+ L + D F +L + +A+I+GD
Sbjct: 291 AFLIADGVIPSNEGRGYVLRRIIRRAVRHGNKLGATDAF-------FYQLVHPLADIMGD 343
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YP+++ +KI+ +A +KE + KT L G+K
Sbjct: 344 AYPQLRHEQHKIE--------------QAILKEEEQFAKT--------------LSQGLK 375
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L+++L ++G+ F LYDTYG ++ ++ K +T+ FE + E +R
Sbjct: 376 LLSQELDSLQQGDALAGETVFKLYDTYGFPADLTADIVREKGITIDEAGFELSMAE--QR 433
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCLDTNLVGIVIGD 538
++A+ A K+ DYH D+ ++ + LD
Sbjct: 434 TRAREAG------------------KFAMDYHALIQVDSATEFLGYERLDN--------- 466
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
D I + G ++D++ E + V LI DKT YA +GGQ+ ++G +
Sbjct: 467 -----DSTVIHLYQDGKAVDTLA-EGDEGV-LILDKTPFYAESGGQVGELG-----EIST 514
Query: 599 ENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAA 658
E+G ++ + I+H G VV + ++ +V +++R + H+ +HLL+AA
Sbjct: 515 ESGVFDVLDTQKSGQAIIHHG-VVKMGHINNNQSATAQVASQVRASSAKNHSATHLLHAA 573
Query: 659 LRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIANQ------VQ 710
LR +L QK V SD DFS Y + L+ +++ +E +N ++AN +
Sbjct: 574 LRTILGDGVSQKGSMVSSDLLRFDFS-YDKPLTEQNISQIEIMVNQQILANTPAHVEILD 632
Query: 711 VDRRHMRASELPFLTHLTVIPGEIYPDDVILIDI--SDKENV-ISREPCCGTHVFNTGHI 767
+D + + + F GE Y D V ++ + +DK+ S E C G HV TG I
Sbjct: 633 IDSAKNKGAMMLF--------GEKYGDTVRVLSMGTTDKDGKPFSIELCGGLHVTRTGDI 684
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENG-KHLSTAAS 808
+I + + GVR I+ +TG + V+ G K L+ A+
Sbjct: 685 GLFKIISEQGISAGVRRIEAVTGMGAVNYVQQGDKQLNQLAN 726
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP+ D ++ F N+GM QFK+ FLGL Y R +SQKC+R GGKHNDL G + HHT
Sbjct: 25 IPHNDPTLLFTNAGMNQFKDTFLGLEKRDYVRAVSSQKCVRAGGKHNDLDNVGYTARHHT 84
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K+DA A EFLT ++LP DRLY T
Sbjct: 85 FFEMLGNFSFGDYFKKDAIAFAWEFLTDEKWLALPKDRLYVT 126
>gi|419939838|ref|ZP_14456622.1| alanyl-tRNA synthetase [Escherichia coli 75]
gi|388406212|gb|EIL66619.1| alanyl-tRNA synthetase [Escherichia coli 75]
Length = 876
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 256/814 (31%), Positives = 386/814 (47%), Gaps = 139/814 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSY 354
S R+++D+ R +AD + P + LR ++R A V+ G ++
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
+++G ++G ++L++ + + L + E EQF E
Sbjct: 330 FFYKLVGP--------------LIGVMGSAGEDLKRQQAQVEQVL---KTEEEQFARTLE 372
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + + FE
Sbjct: 373 RGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEA 427
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCLDTN 530
+ E +R +A+ AS + DY+ D+ S+ + L+ N
Sbjct: 428 AMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHLELN 467
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG- 589
G V +D G ++D+I A V + D+T YA +GGQ+ D G
Sbjct: 468 --GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGDKGE 511
Query: 590 -----VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLG 644
++ TQ+ G+ IG + L + G+ V + +VD R
Sbjct: 512 LKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEARRAR 559
Query: 645 CMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIND 703
H+ +HL++AALR+VL T QK V DFS + E + + + AVE +N
Sbjct: 560 IRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDLVNT 618
Query: 704 VIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFN 763
I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 619 QIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTHASR 673
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 674 TGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|134295482|ref|YP_001119217.1| alanyl-tRNA synthetase [Burkholderia vietnamiensis G4]
gi|205830008|sp|A4JDM9.1|SYA_BURVG RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|134138639|gb|ABO54382.1| alanyl-tRNA synthetase [Burkholderia vietnamiensis G4]
Length = 874
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 242/806 (30%), Positives = 385/806 (47%), Gaps = 128/806 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG PY R
Sbjct: 1 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDQRPYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HHTFFEMLGN+SF DY+K DA R A E LT
Sbjct: 60 ATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLT-TVYQ 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP D+L+ T + D+E DIW E+GVP + I + G NFW MG
Sbjct: 119 LPKDKLWVTVY--------QEDDEAYDIWAKEVGVPAERIIRIGDNKGARYASDNFWTMG 170
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWN+VF+ R + + L
Sbjct: 171 DTGPCGPCTEIFYDHGPDVWGGPPGSP----EEDGDRYIEIWNLVFMQFNRDAQGNMTRL 226
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ERL +LQ+ S Y+ DLF L++ +V+ DL+
Sbjct: 227 PKQSVDTGMGLERLAAVLQHVHSNYEIDLFQNLIKAAARVT------------ETADLNN 274
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELS 353
S ++++D+ R + + D + P + LR +VR A+ +K+ ++G +L
Sbjct: 275 NSLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHG---YKLGRKGAFFHKLV 331
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
++ +G YPE++++ E R+ D LR+ E E+F
Sbjct: 332 ADLVAEMGAAYPELKEA----------EQRVTDVLRQ--------------EEERFFETI 367
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
E G+ + L A+ + + G++AF L+DTYG ++ ++ + +T+ AF+
Sbjct: 368 EHGMSILEAALADVEAKGGKV--LDGELAFKLHDTYGFPLDLTADVCRERGMTVDEPAFD 425
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
+ ++R +A+AA K+K + + TF
Sbjct: 426 DAM--ARQREQARAAG------------------KFKATQGLEYTGAKTTFHGY------ 459
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
+++ D + G+S+ ++ +A V + D T YA +GGQ+ D GV L
Sbjct: 460 ----EEIAFDDAKVVALYVEGSSVGEVKAGQDAVV--VLDHTPFYAESGGQVGDQGV--L 511
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
N + + + ++ ++ + + G R E+DA+ R R H+ +H
Sbjct: 512 ANAAT---RFAVADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATH 568
Query: 654 LLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIND-VIANQVQV 711
L++ ALR VL QK V +D+ DF+ + L+ D + VE+ +ND ++AN +
Sbjct: 569 LMHKALREVLGAHVQQKGSLVDADKTRFDFA-HNAPLTDDEIRRVEQIVNDEILANAPGI 627
Query: 712 DRRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHI 767
R +P+ + + GE Y D+V ++D+ SRE C GTHV TG I
Sbjct: 628 VRV------MPYDEAVKGGAMALFGEKYGDEVRVLDLG-----FSRELCGGTHVQRTGDI 676
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSS 793
++ G+R ++ +TGD++
Sbjct: 677 GLFKIVVEGGVAAGIRRVEAITGDNA 702
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG PY R +Q+ +R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLMFTNSGMVQFKDVFLGTDQRPYTRATTAQRSVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA R A E LT LP D+L+ T
Sbjct: 88 FFEMLGNFSFGDYFKHDAIRFAWELLT-TVYQLPKDKLWVT 127
>gi|418488215|ref|ZP_13056079.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366069940|gb|EHN34058.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
Length = 748
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 252/814 (30%), Positives = 381/814 (46%), Gaps = 139/814 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTN 530
FE + E + R++ +A+ D + M D+ S+ + L+ N
Sbjct: 424 GFEAAMEEQRRRAR-EASGFGADYNAM---------------IRVDSASEFKGYDHLELN 467
Query: 531 LVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD--- 587
G V +D G ++++I A V + D+T YA +GGQ+ D
Sbjct: 468 --GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDQTPFYAESGGQVGDKGE 511
Query: 588 ---IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLG 644
G + + TQ+ G+ IG L L + G+ V + +VD R
Sbjct: 512 LKGAGFTFAVDDTQKYGQA-IGHLGKLSAGALKVGDAVQA-----------DVDEARRAR 559
Query: 645 CMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIND 703
H+ +HL++AALR+VL T QK V DFS + E + + VE +N
Sbjct: 560 IRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIRQVEDLVNA 618
Query: 704 VIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFN 763
I + ++ M + + GE Y + V ++ + D S E C GTH
Sbjct: 619 QIRRNLPIETNIMDLDAAKAKGAMALF-GEKYDERVRVLSMGD----FSTELCGGTHASR 673
Query: 764 TGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I G+R I+ +TG+ + A V
Sbjct: 674 TGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|167628656|ref|YP_001679155.1| alanyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
gi|205830065|sp|B0TFY7.1|SYA_HELMI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|167591396|gb|ABZ83144.1| alanyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
Length = 883
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 257/799 (32%), Positives = 382/799 (47%), Gaps = 115/799 (14%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
+R FL+YF +GHT+V SS +VP+ D ++ F N+GM QFK+VFLG PY R SQ
Sbjct: 8 VRQLFLEYF-EQKGHTIVASSSLVPHNDPTLLFSNAGMNQFKDVFLGFEKRPYLRATTSQ 66
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL GR + HHTFFEMLGN+SF DY+K+DA R A EFLT LP D+
Sbjct: 67 KCVRAGGKHNDLDTVGRTARHHTFFEMLGNFSFGDYFKKDAIRYAWEFLTDV-CGLPKDK 125
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
LY T + D+E +W ++ G+P I + G K NFW MG TGPCG SEI
Sbjct: 126 LYATVY--------LDDDEAFALWRDMIGLPEARILRLGEKDNFWAMGDTGPCGPCSEIL 177
Query: 196 YDMKGE------PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGF 249
D +GE A+ + + DR +EIWN+VF+ + R T+ PL + IDTG+G
Sbjct: 178 ID-RGEHLRCKAEECAIGKCDCDR--WLEIWNLVFMQYNRDENGTMTPLPRPSIDTGMGL 234
Query: 250 ERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRM 309
ER+ ++LQ S YDTDL PL+ +E++ G +R D +R+++D+ R
Sbjct: 235 ERVTSVLQKVGSNYDTDLLRPLIAFVEQLCG--------QVYHRDDRGFPFRVIADHIRS 286
Query: 310 ITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPE 366
T + D + P + LR ++R A+ + V + + + E+ + E++G+ YP+
Sbjct: 287 CTFLITDGVLPSNEGRGYVLRRILRRAVRFGK-VLGIDK-PFMYEIVPVVVELMGEAYPD 344
Query: 367 I---QDSINKIQLILGEESR----IFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVL 419
I QD + K+ I EE R + D +R AA K + +E G VL
Sbjct: 345 IREKQDFVCKVIKI--EEERFHETLHDGMRIAADMVAK-------------VKQEGGNVL 389
Query: 420 GVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNEL 479
G AFTLYDTYG ++ +++A LT+ + F+Q +
Sbjct: 390 ------------------PGKQAFTLYDTYGFPLDLAEDIAEENGLTVDKDGFQQAMEAQ 431
Query: 480 KERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQ 539
+ER++A D Y + P + T G G+
Sbjct: 432 RERARAAR-----------------QDTAYGAGMELWAELLQQLGPTVFTGY-GRTSGES 473
Query: 540 VF-CIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQ 598
V I A R +GA V ++ +T YA +GGQI D G+ +
Sbjct: 474 VVKAIVAGATRVTEAGA---------GTAVQVVLAETPFYAESGGQIGDSGLLRAGDAV- 523
Query: 599 ENGKVEIGELASLEGKI-VHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNA 657
V + + + G + VHFG VV+ G EV++ RL R H+ +HL++
Sbjct: 524 ----VRVEDTKKMAGGLHVHFG-VVAEGVFKEGDQVVAEVESARRLAIARHHSATHLMHK 578
Query: 658 ALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHM 716
AL+ VL Q V D DFS + L+ D +E +N + + V+
Sbjct: 579 ALKEVLGEHVNQAGSLVTPDRLRFDFSHF-SPLTRDEWNRIEAAVNRAVFQALPVEVFET 637
Query: 717 RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYK 776
E + T + GE Y D V ++ + + S E C GTH+ NT + C ++
Sbjct: 638 SIDEAKAMG-ATALFGEKYGDRVRVVRMGN----YSMELCGGTHLDNTSQVGLCKLLSES 692
Query: 777 SYNHGVRSIKCLTGDSSKA 795
G+R I+ +TG+++ A
Sbjct: 693 GIGAGLRRIEAVTGEAALA 711
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLG PY R SQKC+R GGKHNDL GR + HHT
Sbjct: 30 VPHNDPTLLFSNAGMNQFKDVFLGFEKRPYLRATTSQKCVRAGGKHNDLDTVGRTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K+DA R A EFLT LP D+LY T
Sbjct: 90 FFEMLGNFSFGDYFKKDAIRYAWEFLTD-VCGLPKDKLYAT 129
>gi|340000386|ref|YP_004731270.1| alanyl-tRNA synthetase [Salmonella bongori NCTC 12419]
gi|339513748|emb|CCC31505.1| alanyl-tRNA synthetase [Salmonella bongori NCTC 12419]
Length = 876
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 254/819 (31%), Positives = 385/819 (47%), Gaps = 149/819 (18%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S Y+ DLF L+E + KV+GA +DL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYEIDLFRTLIEAVAKVTGA------------SDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLV 349
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 279 KSLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK----- 333
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
L + E++G E++ +++ +L + E EQF
Sbjct: 334 --LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQF 367
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 368 ARTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDE 422
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFP 525
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 423 AGFEAAMEE--QRCRAREASG------------------FGADYNAMIRVDSASEFKGYD 462
Query: 526 CLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQI 585
L+ N G V +D G +++ I A V + D+T YA +GGQ+
Sbjct: 463 HLELN--GKVT---ALFVD---------GKAVEEISAGQEAVV--VLDQTPFYAESGGQV 506
Query: 586 DD------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDA 639
D G + N TQ+ G+ IG L L + G+ V + +VD
Sbjct: 507 GDKGELKGTGFTFAVNDTQKYGQA-IGHLGKLAAGALKVGDAVQA-----------DVDE 554
Query: 640 RMRLGCMRAHTTSHLLNAALRRVLTCTYQKSCRVFSDEC-ALDFSVYGETLSVDSVAAVE 698
R H+ +HL++AALR+VL + + SD+ DFS + E + + VE
Sbjct: 555 ARRARIRLNHSATHLMHAALRQVLGAHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIREVE 613
Query: 699 KYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCG 758
+N I + ++ H+ E + GE Y + V ++ + D S E C G
Sbjct: 614 DLVNAQIRRNLPIE-THIMDLEAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGG 668
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TH TG I ++ GVR I+ +TG+ + A V
Sbjct: 669 THATRTGDIGLFRILSESGTAAGVRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|420326967|ref|ZP_14828714.1| alanyl-tRNA synthetase [Shigella flexneri CCH060]
gi|391249145|gb|EIQ08382.1| alanyl-tRNA synthetase [Shigella flexneri CCH060]
Length = 876
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 259/813 (31%), Positives = 387/813 (47%), Gaps = 145/813 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKDANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E+ + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EVAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I +I GVR I+ +TG+ +
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGA 703
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|421696585|ref|ZP_16136167.1| alanine--tRNA ligase [Acinetobacter baumannii WC-692]
gi|404561346|gb|EKA66581.1| alanine--tRNA ligase [Acinetobacter baumannii WC-692]
Length = 883
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 255/820 (31%), Positives = 385/820 (46%), Gaps = 133/820 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR +FL YF TQGHT V SS +VP D ++ F N+GM QFK+ FLGL Y R
Sbjct: 6 MTSAEIREAFLRYF-ETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVR 64
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
SQKCVR GGKHNDL G + HHTFFEMLGN+SF DY+KRDA + A EFLT +
Sbjct: 65 ATTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWL 124
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEM 182
+LP D+LY T + D+E DIW E+G+ + I + G NFW M
Sbjct: 125 ALPKDKLYVTVY--------HTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAM 176
Query: 183 GSTGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVP 237
G TGPCG SEI +D G P S D + IEIWN VF+ R + + P
Sbjct: 177 GDTGPCGPCSEIFFDHGEHIWGGLPGSP----EEDGDRFIEIWNNVFMQFNRTADGVLHP 232
Query: 238 LSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLD 297
L +DTG+G ER+ +LQ+ S YD DLF LL+ + G + G+
Sbjct: 233 LPAPSVDTGMGLERISAVLQHVNSNYDIDLFQHLLKAAANIIGIEDEGQ----------- 281
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSY 354
S R+++D++R +AD + P + LR ++R A+ + G ++
Sbjct: 282 PSLRVVADHARSCCFLIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGAT--GTFFYKMLQ 339
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
+ E++G YPE++ I+ L ++E + KT LEQ
Sbjct: 340 PLIEVMGQAYPELEARREVIEATL--------------IREEEQFAKT---LEQ------ 376
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
G+K L +LA+ T I G F LYDTYG ++ ++A + + FE
Sbjct: 377 -----GLKLLEGELAQLKDKT-IPGATVFKLYDTYGFPTDLTADIARERGFIIDEAGFEV 430
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
++ +R +A+ A +D + + + ++D + +T +
Sbjct: 431 EM--AAQRQRARDAGKFA----VDYNNIVKVEGETQFDGYTNTTGQ-------------- 470
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
Q+ I K G +D + A + + ++T YA +GGQI D G+
Sbjct: 471 ---GQIVAIYK-------DGVQVDEVSEGDEALI--VLNQTPFYAESGGQIGDTGI---- 514
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
E G E+ + G VH G V V + K++ + + V+ D +R R H+ +H
Sbjct: 515 -FKNETGIFEVQDTKKSGGAFVHQGIVTVGNLKISQNVEAIVKAD--IREATARNHSATH 571
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIANQ--- 708
LL+AALR++L + QK V SD DF+ + +S + + VE+ +N ++IAN
Sbjct: 572 LLHAALRQILGSHVQQKGSLVASDILRFDFA-NDQPVSFEQLQQVERLVNAEIIANTAVT 630
Query: 709 ---VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS---DKENVISREPCCGTHVF 762
+ ++ + + + F GE Y D+V ++ + D++N S E C G HV
Sbjct: 631 TELLDIETAKAKGAMMLF--------GEKYGDEVRVLSMGSVIDEKN-FSIELCGGIHVK 681
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKH 802
TG I + GVR I+ +TG + V+ H
Sbjct: 682 RTGDIGLFKITSEGGVAAGVRRIEAVTGTKALEVVQKADH 721
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+ FLGL Y R SQKC+R GGKHNDL G + HHT
Sbjct: 33 VPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQKCVRAGGKHNDLDNVGYTARHHT 92
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA + A EFLT ++LP D+LY T
Sbjct: 93 FFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDKLYVT 134
>gi|437840981|ref|ZP_20846494.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435296799|gb|ELO73150.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
Length = 876
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 255/818 (31%), Positives = 381/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G +++ I A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEVINAGQEAVV--VLDQTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG L L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHLGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V DFS + E + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIREVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M E + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|416509053|ref|ZP_11736370.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416515259|ref|ZP_11738523.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416530102|ref|ZP_11744718.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416537195|ref|ZP_11748811.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416562796|ref|ZP_11762432.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416572900|ref|ZP_11767484.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|363551522|gb|EHL35839.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363551876|gb|EHL36188.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363563887|gb|EHL47953.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363564239|gb|EHL48296.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363572267|gb|EHL56159.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|363572574|gb|EHL56465.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
Length = 876
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 253/818 (30%), Positives = 382/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G ++++I A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDQTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG + L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHIGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V DFS + E + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIRQVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M + + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDLDAAKAKGAMALF-GEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|421661641|ref|ZP_16101814.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC110]
gi|408715647|gb|EKL60772.1| alanine--tRNA ligase [Acinetobacter baumannii OIFC110]
Length = 885
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 255/820 (31%), Positives = 385/820 (46%), Gaps = 133/820 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR +FL YF TQGHT V SS +VP D ++ F N+GM QFK+ FLGL Y R
Sbjct: 8 MTSAEIREAFLRYF-ETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVR 66
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
SQKCVR GGKHNDL G + HHTFFEMLGN+SF DY+KRDA + A EFLT +
Sbjct: 67 ATTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWL 126
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEM 182
+LP D+LY T + D+E DIW E+G+ + I + G NFW M
Sbjct: 127 ALPKDKLYVTVY--------HTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAM 178
Query: 183 GSTGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVP 237
G TGPCG SEI +D G P S D + IEIWN VF+ R + + P
Sbjct: 179 GDTGPCGPCSEIFFDHGEHIWGGLPGSP----EEDGDRFIEIWNNVFMQFNRTADGVLHP 234
Query: 238 LSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLD 297
L +DTG+G ER+ +LQ+ S YD DLF LL+ + G + G+
Sbjct: 235 LPAPSVDTGMGLERISAVLQHVNSNYDIDLFQHLLKAAANIIGIEDEGQ----------- 283
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSY 354
S R+++D++R +AD + P + LR ++R A+ + G ++
Sbjct: 284 PSLRVVADHARSCCFLIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGAT--GTFFYKMLQ 341
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
+ E++G YPE++ I+ L ++E + KT LEQ
Sbjct: 342 PLIEVMGQAYPELEARREVIEATL--------------IREEEQFAKT---LEQ------ 378
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
G+K L +LA+ T I G F LYDTYG ++ ++A + + FE
Sbjct: 379 -----GLKLLEGELAQLKDKT-IPGATVFKLYDTYGFPTDLTADIARERGFIIDEAGFEV 432
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
++ +R +A+ A +D + + + ++D + +T +
Sbjct: 433 EM--AAQRQRARDAGKFA----VDYNNIVKVEGETQFDGYTNTTGQ-------------- 472
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
Q+ I K G +D + A + + ++T YA +GGQI D G+
Sbjct: 473 ---GQIVAIYK-------DGVQVDEVSEGDEALI--VLNQTPFYAESGGQIGDTGI---- 516
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
E G E+ + G VH G V V + K++ + + V+ D +R R H+ +H
Sbjct: 517 -FKNETGIFEVQDTKKSGGAFVHQGIVTVGNLKISQNVEAIVKAD--IREATARNHSATH 573
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIANQ--- 708
LL+AALR++L + QK V SD DF+ + +S + + VE+ +N ++IAN
Sbjct: 574 LLHAALRQILGSHVQQKGSLVASDILRFDFA-NDQPVSFEQLQQVERLVNAEIIANTAVT 632
Query: 709 ---VQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS---DKENVISREPCCGTHVF 762
+ ++ + + + F GE Y D+V ++ + D++N S E C G HV
Sbjct: 633 TELLDIETAKAKGAMMLF--------GEKYGDEVRVLSMGSVIDEKN-FSIELCGGIHVK 683
Query: 763 NTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKH 802
TG I + GVR I+ +TG + V+ H
Sbjct: 684 RTGDIGLFKITSEGGVAAGVRRIEAVTGTKALEVVQKADH 723
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+ FLGL Y R SQKC+R GGKHNDL G + HHT
Sbjct: 35 VPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQKCVRAGGKHNDLDNVGYTARHHT 94
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA + A EFLT ++LP D+LY T
Sbjct: 95 FFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDKLYVT 136
>gi|168787948|ref|ZP_02812955.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
gi|261225988|ref|ZP_05940269.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
gi|261256754|ref|ZP_05949287.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
gi|189372228|gb|EDU90644.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
Length = 876
Score = 333 bits (853), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 259/813 (31%), Positives = 387/813 (47%), Gaps = 145/813 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G +++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFVVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 MNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I +I GVR I+ +TG+ +
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGA 703
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|167587422|ref|ZP_02379810.1| alanyl-tRNA synthetase [Burkholderia ubonensis Bu]
Length = 874
Score = 333 bits (853), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 242/801 (30%), Positives = 386/801 (48%), Gaps = 118/801 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG PY R
Sbjct: 1 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTESRPYTR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
SQ+ VR GGKHNDL G + HHTFFEMLGN+SF DY+K DA R A E LT
Sbjct: 60 ATTSQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLT-TVYQ 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP ++L+ T + D+E DIW E+GVP + I + G NFW MG
Sbjct: 119 LPKEKLWVTVY--------QEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMG 170
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWN+VF+ R + + L
Sbjct: 171 DTGPCGPCTEIFYDHGPDVWGGPPGSP----EEDGDRYIEIWNLVFMQFNRDAQGNMTRL 226
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ERL +LQ+ S Y+ DLF L++ +V + +DL +
Sbjct: 227 PKPCVDTGMGLERLAAVLQHVHSNYEIDLFQNLIKAAARV------------TEISDLNN 274
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELS 353
S ++++D+ R + + D + P + LR +VR A+ +K+ ++G +L
Sbjct: 275 NSLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAI---RHGYKLGRKGSFFHKLV 331
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
++ +G YPE++++ E R+ D LR+ E E+F
Sbjct: 332 ADLVAEMGVAYPELKEA----------EQRVTDVLRQ--------------EEERFFETI 367
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
E G+ + L + A+ + + G++AF L+DTYG ++ ++ + +T+ AF+
Sbjct: 368 EHGMSILEAALAEVEAKGGKV--LDGELAFKLHDTYGFPLDLTADVCRERGMTVDEPAFD 425
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
+ ++R +A+AA K+K + + + TF
Sbjct: 426 DAM--ARQREQARAAG------------------KFKAAQGLEYSGAKTTFHGY------ 459
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
+++ D + G+S++ ++ +A V + D T YA +GGQ+ D GV L
Sbjct: 460 ----EEIAFDDAKVVALYVDGSSVNEVKTGQDAVV--VLDHTPFYAESGGQVGDQGV--L 511
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
N + + +G+ ++ ++ + + G R E+DA R R H+ +H
Sbjct: 512 ANAST---RFAVGDTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAHRRARTQRNHSATH 568
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVD 712
L++ ALR VL + QK V +D+ DF+ + ++ D + VE+ +ND I
Sbjct: 569 LMHKALREVLGSHVQQKGSLVDADKTRFDFA-HNAPMTDDEIRRVEQIVNDEILANAPGI 627
Query: 713 RRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTV 772
R M E + + GE Y D+V ++D+ SRE C GTHV TG I +
Sbjct: 628 VRVMPYDEAVKGGAMALF-GEKYGDEVRVLDLG-----FSRELCGGTHVSRTGDIGFFKI 681
Query: 773 IGYKSYNHGVRSIKCLTGDSS 793
+ G+R ++ +TGD++
Sbjct: 682 VVEGGVAAGIRRVEAITGDNA 702
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG PY R SQ+ +R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLMFTNSGMVQFKDVFLGTESRPYTRATTSQRSVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA R A E LT LP ++L+ T
Sbjct: 88 FFEMLGNFSFGDYFKHDAIRFAWELLT-TVYQLPKEKLWVT 127
>gi|433169638|ref|ZP_20354261.1| alanyl-tRNA synthetase [Escherichia coli KTE180]
gi|431685914|gb|ELJ51480.1| alanyl-tRNA synthetase [Escherichia coli KTE180]
Length = 876
Score = 333 bits (853), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 260/817 (31%), Positives = 389/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P ++ LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNESRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAC 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
F+ + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FDAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|109899322|ref|YP_662577.1| alanyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
gi|123360521|sp|Q15RG5.1|SYA_PSEA6 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|109701603|gb|ABG41523.1| alanyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
Length = 865
Score = 333 bits (853), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 249/789 (31%), Positives = 373/789 (47%), Gaps = 113/789 (14%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FL++F + +GH V SS +VP D ++ F N+GM QFK+VFLG Y R
Sbjct: 4 STAQIRQAFLNFFAD-KGHQKVSSSSLVPSDDPTLLFTNAGMNQFKDVFLGTEQRKYTRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSL 132
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K A A FLT+ + L
Sbjct: 63 TSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHQAIGYAWSFLTEV-LKL 121
Query: 133 PLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGYS 191
P D+L T + D+E DIW ++G+P++ I + NFW MG TGPCG
Sbjct: 122 PKDKLLVTVY--------SEDDEAFDIWHNDIGIPKEKIIRIATSDNFWSMGDTGPCGPC 173
Query: 192 SEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SEI YD G P S D + IEIWN+VF+ R + ++PL K IDTG
Sbjct: 174 SEIFYDHGEHIWGGPPGSP----EEDGDRFIEIWNLVFMQFNRQANGDMLPLPKPSIDTG 229
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-DTSYRMLSD 305
+G ER+ I+QN S Y+ D+F L++ K+ G T L D S R+++D
Sbjct: 230 MGLERISAIIQNVHSNYEIDIFQNLIKATAKIVGV------------TSLEDKSLRVVAD 277
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R + ++D + P + LR ++R A+ + G +L +A +GD
Sbjct: 278 HIRSCSFLISDGVMPSNEGRGYVLRRIIRRAVRHGNKLGA--NGVFFYKLVAALATEMGD 335
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ + I+ +L + E EQF+ E G+++
Sbjct: 336 AYPELNEQRAVIEKVL------------------------RVEEEQFSRTLERGMLILND 371
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L + + + GD+ F LYDTYG ++ ++A K L++ E FEQ + E +R
Sbjct: 372 ALNELEGK-----VVPGDVVFKLYDTYGFPADLTNDVAREKGLSIDEEGFEQAMAE--QR 424
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
+A+ ASN + DY+ S L++ VG D
Sbjct: 425 KRAQKASN------------------FDVDYNEQLRSD------LESIFVGYEHEDNTAT 460
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGK 602
I + + G S++ +L A +I D++ YA AGGQ D G + G
Sbjct: 461 ITELFFK----GQSVN--ELAAGAEGTVILDESPFYAEAGGQAGDTGT-----LVTDAGG 509
Query: 603 VEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRV 662
+ + L I H G +S K++ G + +V+ R H+ +HL++AAL+ +
Sbjct: 510 FSVKDTVKLGKAIAHKGAALS--KLSVGDSVLAKVNGVRRHAIKLNHSATHLMHAALKSI 567
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L QK V +D DFS + E +S + V AVE +N+ I + + M +
Sbjct: 568 LGEHVNQKGSLVQADRLRFDFSHF-EAMSKEQVLAVETMVNEQILANHPLQTQLMGLEQA 626
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSYNHG 781
+ + GE Y DDV ++ + S E C GTHV TG I +I G
Sbjct: 627 KEAGAMALF-GEKYDDDVRVVSMGS----FSMELCGGTHVERTGDIGLFKIISESGIASG 681
Query: 782 VRSIKCLTG 790
VR I+ +TG
Sbjct: 682 VRRIEAVTG 690
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLG Y R +SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPSDDPTLLFTNAGMNQFKDVFLGTEQRKYTRATSSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K A A FLT+ + LP D+L T
Sbjct: 90 FFEMLGNFSFGDYFKHQAIGYAWSFLTE-VLKLPKDKLLVT 129
>gi|168235854|ref|ZP_02660912.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194737652|ref|YP_002115779.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194713154|gb|ACF92375.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197290777|gb|EDY30131.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 876
Score = 333 bits (853), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 253/818 (30%), Positives = 382/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G ++++I A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDQTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG + L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHIGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V DFS + E + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIRQVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M + + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDLDAAKAKGAMALF-GEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|30064057|ref|NP_838228.1| alanyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|56480163|ref|NP_708505.2| alanyl-tRNA synthetase [Shigella flexneri 2a str. 301]
gi|110806677|ref|YP_690197.1| alanyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
gi|384544280|ref|YP_005728343.1| alanyl-tRNA synthetase [Shigella flexneri 2002017]
gi|417703420|ref|ZP_12352526.1| alanyl-tRNA synthetase [Shigella flexneri K-218]
gi|417724324|ref|ZP_12373126.1| alanyl-tRNA synthetase [Shigella flexneri K-304]
gi|417734721|ref|ZP_12383369.1| alanyl-tRNA synthetase [Shigella flexneri 2747-71]
gi|420332576|ref|ZP_14834226.1| alanyl-tRNA synthetase [Shigella flexneri K-1770]
gi|424839065|ref|ZP_18263702.1| alanyl-tRNA synthetase [Shigella flexneri 5a str. M90T]
gi|44888327|sp|Q7UBU3.1|SYA_SHIFL RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|123146773|sp|Q0T1C3.1|SYA_SHIF8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|30042313|gb|AAP18038.1| alanyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|56383714|gb|AAN44212.2| alanyl-tRNA synthetase [Shigella flexneri 2a str. 301]
gi|110616225|gb|ABF04892.1| alanyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
gi|281602067|gb|ADA75051.1| Alanyl-tRNA synthetase [Shigella flexneri 2002017]
gi|332755665|gb|EGJ86028.1| alanyl-tRNA synthetase [Shigella flexneri 2747-71]
gi|333000647|gb|EGK20224.1| alanyl-tRNA synthetase [Shigella flexneri K-218]
gi|333015876|gb|EGK35212.1| alanyl-tRNA synthetase [Shigella flexneri K-304]
gi|383468117|gb|EID63138.1| alanyl-tRNA synthetase [Shigella flexneri 5a str. M90T]
gi|391249407|gb|EIQ08642.1| alanyl-tRNA synthetase [Shigella flexneri K-1770]
Length = 876
Score = 333 bits (853), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 258/813 (31%), Positives = 386/813 (47%), Gaps = 145/813 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + ++D
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DIDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMNL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I +I GVR I+ +TG+ +
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGA 703
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|417663255|ref|ZP_12312835.1| alanyl-tRNA synthetase [Escherichia coli AA86]
gi|432889934|ref|ZP_20102980.1| alanyl-tRNA synthetase [Escherichia coli KTE165]
gi|330908728|gb|EGH37242.1| alanyl-tRNA synthetase [Escherichia coli AA86]
gi|431432808|gb|ELH14484.1| alanyl-tRNA synthetase [Escherichia coli KTE165]
Length = 876
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 263/817 (32%), Positives = 388/817 (47%), Gaps = 145/817 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
F+ + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FDAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G S+D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKSVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L V S KV G + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKL---------AVGSLKV--GDAVQADVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + VE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRVVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I +I GVR I+ +TG+ + A V
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATV 707
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|424056260|ref|ZP_17793781.1| alanyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
gi|407441300|gb|EKF47806.1| alanyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
Length = 878
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 258/815 (31%), Positives = 383/815 (46%), Gaps = 123/815 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR +FL YF TQGHT V SS +VP D ++ F N+GM QFK+ FLGL Y R
Sbjct: 1 MTSAEIREAFLRYF-ETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
SQKCVR GGKHNDL G + HHTFFEMLGN+SF DY+KRDA + A EFLT +
Sbjct: 60 ATTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWL 119
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEM 182
+LP DRLY T + D+E DIW E+G+ + I + G NFW M
Sbjct: 120 ALPKDRLYVTVY--------HTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAM 171
Query: 183 GSTGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVP 237
G TGPCG SEI +D G P S D + IEIWN VF+ R + + P
Sbjct: 172 GDTGPCGPCSEIFFDHGDHIWGGLPGSP----EEDGDRFIEIWNNVFMQFNRTADGVLHP 227
Query: 238 LSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLD 297
L +DTG+G ER+ +LQ+ S YD DLF LL+ + G + G+
Sbjct: 228 LPAPSVDTGMGLERISAVLQHVNSNYDIDLFQHLLKAAANIIGIEDEGQ----------- 276
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSY 354
S R+++D++R +AD + P + LR ++R A+ + G ++
Sbjct: 277 PSLRVVADHARSCCFLIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGAT--GTFFYKMLQ 334
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
+ E++G YPE++ + I+ L ++E + KT LEQ
Sbjct: 335 PLIEVMGQAYPELEARRDVIEATL--------------IREEEQFAKT---LEQ------ 371
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
G+K L +LA+ T I G F LYDTYG ++ ++A + + FE
Sbjct: 372 -----GLKLLEGELAQLKDKT-IPGATVFKLYDTYGFPTDLTADIARERGFIIDEAGFEV 425
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
++ +R +A+ A +D + + ++D + +T +
Sbjct: 426 EM--AAQRQRARDAGKFA----VDYNSIVKVEGETQFDGYINTTGQ-------------- 465
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
Q+ I K G +D + A + + ++T YA +GGQI D G+
Sbjct: 466 ---GQIVAIYK-------DGVQVDEVSEGDEALI--VLNQTPFYAESGGQIGDTGI---- 509
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
E G E+ + G VH G V V + K + + V+ D +R R H+ +H
Sbjct: 510 -FKNETGIFEVQDTKKSGGAFVHQGIVTVGNLKANQNVEAIVKAD--IREATARNHSATH 566
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIANQ-VQ 710
LL+AALR++L + QK V SD DF+ + +S + + VE+ +N ++IAN V
Sbjct: 567 LLHAALRQILGSHVQQKGSLVASDILRFDFA-NDQPVSFEQLQQVERLVNAEIIANTPVT 625
Query: 711 VDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS---DKENVISREPCCGTHVFNTGHI 767
+ + A++ L GE Y D+V ++ + D++N S E C G HV TG I
Sbjct: 626 TELLDIEAAKAKGAMMLF---GEKYGDEVRVLSMGSVIDEKN-FSIELCGGIHVKRTGDI 681
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKH 802
+ GVR I+ +TG + V+ H
Sbjct: 682 GLFKITSEGGVAAGVRRIEAVTGTKALEVVQKADH 716
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+ FLGL Y R SQKC+R GGKHNDL G + HHT
Sbjct: 28 VPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQKCVRAGGKHNDLDNVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA + A EFLT ++LP DRLY T
Sbjct: 88 FFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDRLYVT 129
>gi|331678669|ref|ZP_08379343.1| alanine--tRNA ligase [Escherichia coli H591]
gi|331073499|gb|EGI44820.1| alanine--tRNA ligase [Escherichia coli H591]
Length = 876
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 259/813 (31%), Positives = 386/813 (47%), Gaps = 145/813 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I +I GVR I+ +TG+ +
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGA 703
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|260549963|ref|ZP_05824178.1| alanyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|425741331|ref|ZP_18859481.1| alanine--tRNA ligase [Acinetobacter baumannii WC-487]
gi|260406955|gb|EEX00433.1| alanyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|425492637|gb|EKU58891.1| alanine--tRNA ligase [Acinetobacter baumannii WC-487]
Length = 883
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 257/815 (31%), Positives = 382/815 (46%), Gaps = 123/815 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S IR +FL YF TQGHT V SS +VP D ++ F N+GM QFK+ FLGL Y R
Sbjct: 6 MTSAEIREAFLRYF-ETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRDYVR 64
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
SQKCVR GGKHNDL G + HHTFFEMLGN+SF DY+KRDA + A EFLT +
Sbjct: 65 ATTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTSEQWL 124
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEM 182
+LP DRLY T + D+E DIW E+G+ + I + G NFW M
Sbjct: 125 ALPKDRLYVTVY--------HTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAM 176
Query: 183 GSTGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVP 237
G TGPCG SEI +D G P S D + IEIWN VF+ R + + P
Sbjct: 177 GDTGPCGPCSEIFFDHGDHIWGGLPGSP----EEDGDRFIEIWNNVFMQFNRTADGVLHP 232
Query: 238 LSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLD 297
L +DTG+G ER+ +LQ+ S YD DLF LL+ + G + G+
Sbjct: 233 LPAPSVDTGMGLERISAVLQHVNSNYDIDLFQHLLKAAANIIGIEDEGQ----------- 281
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSY 354
S R+++D++R +AD + P + LR ++R A+ + G ++
Sbjct: 282 PSLRVVADHARSCCFLIADGVNPSNEGRGYVLRRIIRRAVRHGNKLGAT--GTFFYKMLQ 339
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
+ E++G YPE++ + I+ L ++E + KT LEQ
Sbjct: 340 PLIEVMGQAYPELEARRDVIEATL--------------IREEEQFAKT---LEQ------ 376
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
G+K L +LA+ T I G F LYDTYG ++ ++A + + FE
Sbjct: 377 -----GLKLLEGELAQLKDKT-IPGATVFKLYDTYGFPTDLTADIARERGFIIDEAGFEV 430
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
++ ++R++ V D + + ++D + +T +
Sbjct: 431 EMAAQRQRARDAGKFAV------DYNSIVKVEGETQFDGYINTTGQ-------------- 470
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
Q+ I K G +D + A + + ++T YA +GGQI D G+
Sbjct: 471 ---GQIVAIYK-------DGVQVDEVSEGDEALI--VLNQTPFYAESGGQIGDTGI---- 514
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNV-VSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
E G E+ + G VH G V V + K + + V+ D +R R H+ +H
Sbjct: 515 -FKNETGIFEVQDTKKSGGAFVHQGIVTVGNLKANQNVEAIVKAD--IREATARNHSATH 571
Query: 654 LLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIN-DVIANQ-VQ 710
LL+AALR++L + QK V SD DF+ + +S + + VE+ +N ++IAN V
Sbjct: 572 LLHAALRQILGSHVQQKGSLVASDILRFDFA-NDQPVSFEQLQQVERLVNAEIIANTPVT 630
Query: 711 VDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS---DKENVISREPCCGTHVFNTGHI 767
+ + A++ L GE Y D+V ++ + D++N S E C G HV TG I
Sbjct: 631 TELLDIEAAKAKGAMMLF---GEKYGDEVRVLSMGSVIDEKN-FSIELCGGIHVKRTGDI 686
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKH 802
+ GVR I+ +TG + V+ H
Sbjct: 687 GLFKITSEGGVAAGVRRIEAVTGTKALEVVQKADH 721
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+ FLGL Y R SQKC+R GGKHNDL G + HHT
Sbjct: 33 VPANDPTLLFTNAGMNQFKDCFLGLEKRDYVRATTSQKCVRAGGKHNDLDNVGYTARHHT 92
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA + A EFLT ++LP DRLY T
Sbjct: 93 FFEMLGNFSFGDYFKRDALKFAWEFLTSEQWLALPKDRLYVT 134
>gi|163759600|ref|ZP_02166685.1| alanyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
gi|162283197|gb|EDQ33483.1| alanyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
Length = 884
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 254/818 (31%), Positives = 393/818 (48%), Gaps = 113/818 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FLDYF + H +V SSP+VP D ++ F N+GM QFKNVF GL PY A SQ
Sbjct: 7 IRSAFLDYFKKNE-HEVVASSPLVPRNDPTLMFTNAGMVQFKNVFTGLEHRPYTTAATSQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K A +A LT+ + +R
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQAIELAWNLLTRE-FGINKER 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
L T + D++ D+W ++ GVP I + NFW MG TGPCG SEI
Sbjct: 125 LLVTVY--------HTDDDAFDLWRKIAGVPESRIIRIPTSDNFWAMGDTGPCGPCSEIF 176
Query: 196 YD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
YD G P SA + D + IEIWN+VF+ ++++ D V L + IDTG+G E
Sbjct: 177 YDHGDHIWGGPPGSA----DEDGDRFIEIWNLVFMQFEQLTVDERVDLPRPSIDTGMGLE 232
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +LQ + YD DLF L+ E+++G G D S+R+++D+ R
Sbjct: 233 RIAALLQGQHDNYDIDLFRRLIMASEELTGVSAEG---------DRRASHRVIADHLRSS 283
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+AD + P + LR ++R A+ ++ + ++ + K L +AE +G YPE+
Sbjct: 284 AFLIADGVLPSNEGRGYVLRRIMRRAMRHAQ-LLGAQEPLMYKLLPTLVAE-MGRAYPEL 341
Query: 368 QDSINKIQLILG-EESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTK 426
+ I L EE+R L + ++++E LG
Sbjct: 342 TRAEALISETLKLEETRFSKTLERG-----------------LSLLDEASADLG------ 378
Query: 427 QLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAK 486
+ G+ AF LYDTYG ++ Q+ + + + + F+ + ER KA+
Sbjct: 379 ------EGDRLGGETAFKLYDTYGFPLDLTQDALRQRGIEVDTDGFKAAM----ERQKAE 428
Query: 487 AASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSK--RYTFPCLDTNLVGIVIGDQVFCID 544
A + H+ + DK Y+ + F DT + VI Q D
Sbjct: 429 ARA-----------HWSGSGDKATETVWYEIKDRVGATDFLGYDTEIAEGVI--QAMVRD 475
Query: 545 KHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVE 604
+ A++G S+D ++ ++T Y +GGQ+ D G+ + E ++E
Sbjct: 476 GAEVAAAKAGESVD-----------VVVNQTPFYGESGGQMGDQGI-----ISGEGYRLE 519
Query: 605 IGELASL-EGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA-HTTSHLLNAALRRV 662
+ + EG VH VV+ +V G ++++V A R +RA H+ +HLL+ ALR V
Sbjct: 520 VSDTQKRGEGLFVHRA-VVAEGEVKAGAVAQLDV-AHSRRAKIRANHSATHLLHEALREV 577
Query: 663 L-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASEL 721
L T QK V + D S + + ++ + ++ VE N++I V R M A +
Sbjct: 578 LGTHVAQKGSLVAPERLRFDVS-HPKPMTAEELSEVETMANEIILQNSPVTTRLM-AVDD 635
Query: 722 PFLTHLTVIPGEIYPDDVILIDISDKENVI------SREPCCGTHVFNTGHIESCTVIGY 775
+ GE Y D+V ++ + + S E C GTHV TG I V+
Sbjct: 636 AIAEGAMALFGEKYGDEVRVVSMGTGVRGVKANRPYSVELCGGTHVAATGEIGLVRVLSD 695
Query: 776 KSYNHGVRSIKCLTGDSSKAAV-ENGKHLSTAASFSQI 812
+ + GVR I+ +TG++++ + E + L AAS ++
Sbjct: 696 SAVSAGVRRIEAVTGEAARQHLSEQDEKLRQAASLLKV 733
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 59/88 (67%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFKNVF GL PY A SQKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFTNAGMVQFKNVFTGLEHRPYTTAATSQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTK 905
FFEMLGN+SF DY+K A +A LT+
Sbjct: 89 FFEMLGNFSFGDYFKEQAIELAWNLLTR 116
>gi|357406172|ref|YP_004918096.1| alanyl-tRNA synthetase [Methylomicrobium alcaliphilum 20Z]
gi|351718837|emb|CCE24511.1| alanyl-tRNA synthetase [Methylomicrobium alcaliphilum 20Z]
Length = 875
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 251/802 (31%), Positives = 382/802 (47%), Gaps = 129/802 (16%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ S +RS+FLD+F +GH++ SS +VP D ++ F N+GM QFK+VFLG Y R
Sbjct: 4 MSSSELRSAFLDFF-RQRGHSIQPSSSLVPGNDPTLLFTNAGMVQFKDVFLGREHRDYTR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
A SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA +A +FLTK +
Sbjct: 63 AATSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIHLAWDFLTKE-LG 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWLE-LGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
+P ++L+ T F D+ D E IWLE +G + G K NFW MG GPCG
Sbjct: 122 IPAEKLWVTVF---DE-----DSEAEKIWLEDVGADPKRFSRIGSKDNFWAMGDIGPCGP 173
Query: 191 SSEIHYDMKGE--PSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLG 248
SEI YD GE P + D + IEIWN+VF+ + R S + L K +DTG+G
Sbjct: 174 CSEIFYD-HGESIPGGPPGSPDEDGDRFIEIWNLVFMQYDRDSEGNLHALPKPSVDTGMG 232
Query: 249 FERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSR 308
ER+ ++Q S Y+ DLF LL+ K++G K ++ S R+++D+ R
Sbjct: 233 LERIAAVMQGVHSNYEIDLFQGLLKAAAKLAGIKDLNKS-----------SLRVIADHIR 281
Query: 309 MITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVK-------ELSYNIAEILG 361
+ D + P N R +L ++ G + +L + E +G
Sbjct: 282 SCAFLIVDGVLPS------NEGRGYVLRRIIRRAIRHGYRLGIREVFFYQLVAPLVEQMG 335
Query: 362 DVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGV 421
+ YPE++++ +++ +L +E F LEQ G+
Sbjct: 336 EAYPELKNAQEQVERVLKKEEERFAET-----------------LEQ-----------GM 367
Query: 422 KYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKE 481
K L +A+ T I G++ F LYDTYG ++ + A +LT+ H FE ++ E +
Sbjct: 368 KILEACVAKLEGST-IPGNIVFQLYDTYGFPVDLTADFAREHQLTIDHAGFETEMAE--Q 424
Query: 482 RSKAKAASNVPDIDLMDLKHFPVTDDKYKY-DYHYDTNSKRYTFPCLDTNLVGIVIGDQV 540
R++A+AAS+ D D + ++ Y Y +S T ++G+ +
Sbjct: 425 RNRARAASSFG----ADYNQTLKLDGQTEFTGYQYLEDS---------TKIIGLFM---- 467
Query: 541 FCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG-------VAYL 593
G +++S+ V + +KT Y +GGQ+ D G V +
Sbjct: 468 ------------EGEAVESLNEGDEGIV--VLEKTPFYGESGGQVGDCGRISTDQGVFEV 513
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVS-SFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
NT ++ G + +H G ++S S V T+RV D R H+ +
Sbjct: 514 VNTQKQGGDL-----------FLHRGKLLSGSLSVGESCTARV--DKIKRKATELNHSAT 560
Query: 653 HLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQV 711
HLL+AALR VL QK V ++ DFS + E ++ + +A +E+ +N+ I V
Sbjct: 561 HLLHAALREVLGDHVTQKGSLVNAERLRFDFSHF-EPVTPEQIAVIERLVNEQIRLNEPV 619
Query: 712 DRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCT 771
M A E + GE Y D+V ++ I S E C GTHV G I
Sbjct: 620 LAEVM-AKEEAMQAGAMALFGEKYGDEVRVLRIGG----FSTELCGGTHVDRAGDIGLFK 674
Query: 772 VIGYKSYNHGVRSIKCLTGDSS 793
+IG GVR I+ +TG ++
Sbjct: 675 IIGETGVAAGVRRIEAVTGSAA 696
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLG Y R A SQ+C+R GGKHNDL G + HHT
Sbjct: 31 VPGNDPTLLFTNAGMVQFKDVFLGREHRDYTRAATSQRCVRAGGKHNDLENVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K+DA +A +FLTK + +P ++L+ T
Sbjct: 91 FFEMLGNFSFGDYFKQDAIHLAWDFLTK-ELGIPAEKLWVT 130
>gi|146312813|ref|YP_001177887.1| alanyl-tRNA synthetase [Enterobacter sp. 638]
gi|205830088|sp|A4WDQ6.1|SYA_ENT38 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|145319689|gb|ABP61836.1| alanyl-tRNA synthetase [Enterobacter sp. 638]
Length = 875
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 256/816 (31%), Positives = 384/816 (47%), Gaps = 143/816 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWFN 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P +A D + IEIWNIVF+ R T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGTA----EEDGDRYIEIWNIVFMQFNRQIDGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++++ +V+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFSTLIKSVAEVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLV 349
S R+++D+ R +AD + P + LR ++R A +L ++D F K
Sbjct: 279 KSLRVIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGNMLGAKDTFFYK----- 333
Query: 350 KELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQF 409
L + ++GD E++ ++++ +L + E EQF
Sbjct: 334 --LVGPLVGVMGDAGEELKRQQSQVEQVL------------------------KTEEEQF 367
Query: 410 NIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCH 469
E GL L + L+ QL D + G+ AF LYDTYG ++ ++ + + +
Sbjct: 368 ARTLERGLALLDEELS-QLTGDT----LDGETAFRLYDTYGFPVDLTADVCRERNIKVDE 422
Query: 470 EAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDT 529
FE + E + R++ + Y D+ S+ + L+
Sbjct: 423 AGFEAAMEEQRRRARESSGFGA----------------DYNAMIRVDSASEFQGYDRLEL 466
Query: 530 NLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDI- 588
N + +D G ++DSI +A V + DKT YA +GGQ+ D
Sbjct: 467 NAKVTAL-----FVD---------GKAVDSISAGQDAVV--VLDKTPFYAESGGQVGDKG 510
Query: 589 -----GVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVS-SFKVTPGLTSRVEVDARMR 642
G ++ + TQ+ G+ I H G + S S KV G+ + EVD R
Sbjct: 511 ELKGNGFSFAVSDTQKYGQA-----------IGHIGKLASGSLKVGEGV--QAEVDEARR 557
Query: 643 LGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYI 701
H+ +HL++AALR VL T QK V DFS + E + + AVE +
Sbjct: 558 ERIRLNHSATHLMHAALRDVLGTHVAQKGSLVNDKILRFDFSHF-EAMKPSEIRAVEDMV 616
Query: 702 NDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHV 761
N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 617 NAQIRRNLPIETNIMDL-EAARAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTHA 671
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
TG I ++ GVR I+ +TG+ + A++
Sbjct: 672 SRTGDIGLFRILSESGTAAGVRRIEAVTGEGAIASL 707
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQYAWELLTGENWFNLPKERLWVT 131
>gi|402566787|ref|YP_006616132.1| alanyl-tRNA synthetase [Burkholderia cepacia GG4]
gi|402247984|gb|AFQ48438.1| alanyl-tRNA synthetase [Burkholderia cepacia GG4]
Length = 874
Score = 332 bits (852), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 248/812 (30%), Positives = 391/812 (48%), Gaps = 140/812 (17%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG P PY R
Sbjct: 1 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT
Sbjct: 60 ATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLT-TVYQ 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP D+L+ T + D+E DIW E+GVP + I + G NFW MG
Sbjct: 119 LPKDKLWVTVY--------QEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMG 170
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWN+VF+ R + + L
Sbjct: 171 DTGPCGPCTEIFYDHGPDVWGGPPGSP----EEDGDRYIEIWNLVFMQFNRDAQGNMTRL 226
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ERL +LQ+ S Y+ DLF L++ +V+ +DL+
Sbjct: 227 PKQSVDTGMGLERLAAVLQHVHSNYEIDLFQNLIKAAARVT------------EISDLNN 274
Query: 299 -SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELS 353
S ++++D+ R + + D + P + LR +VR A+ +K+ ++G +L
Sbjct: 275 NSLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAI---RHGYKLGRKGSFFHKLV 331
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
++ +G YPE++++ E R+ D LR+ E E+F
Sbjct: 332 ADLVAEMGAAYPELKEA----------EQRVTDVLRQ--------------EEERFFETI 367
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
E G+ + L A+ + + G++AF L+DTYG ++ ++ + +T+ AF+
Sbjct: 368 EHGMSILEAALADVEAKGGKV--LDGELAFKLHDTYGFPLDLTADVCRERGMTVDEPAFD 425
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
+ ++R +A+AA K+K + + + TF
Sbjct: 426 DAM--ARQREQARAAG------------------KFKAAQGLEYSGAKTTFHGY------ 459
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV--- 590
+++ D + GAS++ ++ +A V + D T YA +GGQ+ D GV
Sbjct: 460 ----EEIAFDDAKIVALYVDGASVNEVKHGQDAVV--VLDHTPFYAESGGQVGDQGVLAN 513
Query: 591 AYLTNTTQENGKVE---IGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMR 647
A + KV+ IG +LE + G+V+ R E+DA R R
Sbjct: 514 AATRFAVADTLKVQADVIGHHGTLEQGTLKIGDVL-----------RAEIDAHRRARTQR 562
Query: 648 AHTTSHLLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYI-NDVI 705
H+ +HL++ ALR VL QK V +++ DF+ + +S D + VE+ + N+++
Sbjct: 563 NHSATHLMHKALRDVLGAHVQQKGSLVDAEKTRFDFA-HNAPMSDDEIRRVEQIVNNEIL 621
Query: 706 ANQVQVDRRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHV 761
AN + R LP+ + + GE Y D+V ++D+ SRE C GTHV
Sbjct: 622 ANAPGIVRV------LPYDEAVKGGAMALFGEKYGDEVRVLDLG-----FSRELCGGTHV 670
Query: 762 FNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I ++ G+R ++ +TGD++
Sbjct: 671 HRTGDIGFFKIVVEGGVAAGIRRVEAITGDNA 702
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG P PY R +Q+ +R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQRSVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT LP D+L+ T
Sbjct: 88 FFEMLGNFSFGDYFKHDAIKFAWELLT-TVYQLPKDKLWVT 127
>gi|432482004|ref|ZP_19723958.1| alanyl-tRNA synthetase [Escherichia coli KTE210]
gi|431005675|gb|ELD20689.1| alanyl-tRNA synthetase [Escherichia coli KTE210]
Length = 876
Score = 332 bits (852), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 259/813 (31%), Positives = 386/813 (47%), Gaps = 145/813 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I +I GVR I+ +TG+ +
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGA 703
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|16761603|ref|NP_457220.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|29143087|ref|NP_806429.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|213052376|ref|ZP_03345254.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
gi|213426121|ref|ZP_03358871.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213579902|ref|ZP_03361728.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
gi|213622611|ref|ZP_03375394.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
gi|213852307|ref|ZP_03381839.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
gi|289824467|ref|ZP_06544043.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|378960884|ref|YP_005218370.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|20532252|sp|Q8Z4D5.1|SYA_SALTI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|25293091|pir||AF0843 alanine-tRNA ligase (EC 6.1.1.7) - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16503904|emb|CAD05933.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29138720|gb|AAO70289.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|374354756|gb|AEZ46517.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
Length = 876
Score = 332 bits (852), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 253/818 (30%), Positives = 382/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+G+ G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGSTDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G ++++I A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDQTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG L L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHLGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V DFS + E + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFS-HNEAMKPSEIREVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M + + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDLDAAKAKGAMALF-GEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|74313262|ref|YP_311681.1| alanyl-tRNA synthetase [Shigella sonnei Ss046]
gi|157158305|ref|YP_001464004.1| alanyl-tRNA synthetase [Escherichia coli E24377A]
gi|191167095|ref|ZP_03028916.1| alanyl-tRNA synthetase [Escherichia coli B7A]
gi|193065058|ref|ZP_03046133.1| alanyl-tRNA synthetase [Escherichia coli E22]
gi|193069650|ref|ZP_03050602.1| alanyl-tRNA synthetase [Escherichia coli E110019]
gi|194427866|ref|ZP_03060412.1| alanyl-tRNA synthetase [Escherichia coli B171]
gi|209920136|ref|YP_002294220.1| alanyl-tRNA synthetase [Escherichia coli SE11]
gi|218555239|ref|YP_002388152.1| alanyl-tRNA synthetase [Escherichia coli IAI1]
gi|218696288|ref|YP_002403955.1| alanyl-tRNA synthetase [Escherichia coli 55989]
gi|260845339|ref|YP_003223117.1| alanyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
gi|260856802|ref|YP_003230693.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
gi|260869370|ref|YP_003235772.1| alanyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
gi|293449010|ref|ZP_06663431.1| alanyl-tRNA synthetase [Escherichia coli B088]
gi|307314418|ref|ZP_07594023.1| alanyl-tRNA synthetase [Escherichia coli W]
gi|331669429|ref|ZP_08370275.1| alanine--tRNA ligase [Escherichia coli TA271]
gi|332280649|ref|ZP_08393062.1| alanyl-tRNA synthetase [Shigella sp. D9]
gi|378711884|ref|YP_005276777.1| alanyl-tRNA synthetase [Escherichia coli KO11FL]
gi|383179835|ref|YP_005457840.1| alanyl-tRNA synthetase [Shigella sonnei 53G]
gi|386610056|ref|YP_006125542.1| alanyl-tRNA synthetase [Escherichia coli W]
gi|386700397|ref|YP_006164234.1| alanyl-tRNA synthetase [Escherichia coli KO11FL]
gi|386710547|ref|YP_006174268.1| alanyl-tRNA synthetase [Escherichia coli W]
gi|415818369|ref|ZP_11508091.1| alanyl-tRNA synthetase [Escherichia coli OK1180]
gi|418942124|ref|ZP_13495419.1| alanyl-tRNA synthetase [Escherichia coli O157:H43 str. T22]
gi|419387306|ref|ZP_13928180.1| alanyl-tRNA synthetase [Escherichia coli DEC14D]
gi|419862166|ref|ZP_14384783.1| alanyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
gi|419867527|ref|ZP_14389842.1| alanyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
gi|419875139|ref|ZP_14397020.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
gi|419886128|ref|ZP_14406779.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
gi|419887653|ref|ZP_14408222.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9570]
gi|419893005|ref|ZP_14413012.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9574]
gi|419904743|ref|ZP_14423730.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
gi|419907500|ref|ZP_14426323.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
gi|419922450|ref|ZP_14440463.1| alanyl-tRNA synthetase [Escherichia coli 541-15]
gi|419927078|ref|ZP_14444818.1| alanyl-tRNA synthetase [Escherichia coli 541-1]
gi|419948490|ref|ZP_14464786.1| alanyl-tRNA synthetase [Escherichia coli CUMT8]
gi|420090831|ref|ZP_14602593.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9602]
gi|420097685|ref|ZP_14608977.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9634]
gi|420109762|ref|ZP_14619861.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
gi|420115104|ref|ZP_14624681.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
gi|420123401|ref|ZP_14632293.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
gi|420128890|ref|ZP_14637438.1| alanyl-tRNA ligase [Escherichia coli O26:H11 str. CVM10224]
gi|420133449|ref|ZP_14641685.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
gi|422010635|ref|ZP_16357589.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
gi|422760145|ref|ZP_16813905.1| alanyl-tRNA synthetase [Escherichia coli E1167]
gi|422776092|ref|ZP_16829747.1| alanyl-tRNA synthetase [Escherichia coli H120]
gi|422962690|ref|ZP_16972963.1| alanyl-tRNA synthetase [Escherichia coli H494]
gi|423706850|ref|ZP_17681233.1| alanyl-tRNA synthetase [Escherichia coli B799]
gi|424754171|ref|ZP_18182091.1| alanyl-tRNA ligase [Escherichia coli O26:H11 str. CFSAN001629]
gi|424763353|ref|ZP_18190831.1| alanyl-tRNA ligase [Escherichia coli O111:H11 str. CFSAN001630]
gi|424772984|ref|ZP_18200065.1| alanyl-tRNA ligase [Escherichia coli O111:H8 str. CFSAN001632]
gi|427805849|ref|ZP_18972916.1| alanyl-tRNA synthetase [Escherichia coli chi7122]
gi|427810440|ref|ZP_18977505.1| alanyl-tRNA synthetase [Escherichia coli]
gi|432377868|ref|ZP_19620856.1| alanyl-tRNA synthetase [Escherichia coli KTE12]
gi|432766034|ref|ZP_20000456.1| alanyl-tRNA synthetase [Escherichia coli KTE48]
gi|432806846|ref|ZP_20040763.1| alanyl-tRNA synthetase [Escherichia coli KTE91]
gi|432810378|ref|ZP_20044256.1| alanyl-tRNA synthetase [Escherichia coli KTE101]
gi|432828304|ref|ZP_20061925.1| alanyl-tRNA synthetase [Escherichia coli KTE135]
gi|432835624|ref|ZP_20069160.1| alanyl-tRNA synthetase [Escherichia coli KTE136]
gi|432935592|ref|ZP_20134906.1| alanyl-tRNA synthetase [Escherichia coli KTE184]
gi|432968740|ref|ZP_20157653.1| alanyl-tRNA synthetase [Escherichia coli KTE203]
gi|433093037|ref|ZP_20279298.1| alanyl-tRNA synthetase [Escherichia coli KTE138]
gi|433131209|ref|ZP_20316641.1| alanyl-tRNA synthetase [Escherichia coli KTE163]
gi|433135870|ref|ZP_20321208.1| alanyl-tRNA synthetase [Escherichia coli KTE166]
gi|433194715|ref|ZP_20378698.1| alanyl-tRNA synthetase [Escherichia coli KTE90]
gi|443618718|ref|YP_007382574.1| alanyl-tRNA ligase [Escherichia coli APEC O78]
gi|450220620|ref|ZP_21896389.1| alanyl-tRNA ligase [Escherichia coli O08]
gi|123616373|sp|Q3YYG6.1|SYA_SHISS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830081|sp|A7ZQC5.1|SYA_ECO24 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|73856739|gb|AAZ89446.1| alanyl-tRNA synthetase [Shigella sonnei Ss046]
gi|157080335|gb|ABV20043.1| alanyl-tRNA synthetase [Escherichia coli E24377A]
gi|190902877|gb|EDV62605.1| alanyl-tRNA synthetase [Escherichia coli B7A]
gi|192927355|gb|EDV81974.1| alanyl-tRNA synthetase [Escherichia coli E22]
gi|192957013|gb|EDV87464.1| alanyl-tRNA synthetase [Escherichia coli E110019]
gi|194414099|gb|EDX30375.1| alanyl-tRNA synthetase [Escherichia coli B171]
gi|209913395|dbj|BAG78469.1| alanyl-tRNA synthase [Escherichia coli SE11]
gi|218353020|emb|CAU98845.1| alanyl-tRNA synthetase [Escherichia coli 55989]
gi|218362007|emb|CAQ99613.1| alanyl-tRNA synthetase [Escherichia coli IAI1]
gi|257755451|dbj|BAI26953.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
gi|257760486|dbj|BAI31983.1| alanyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
gi|257765726|dbj|BAI37221.1| alanyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
gi|291322100|gb|EFE61529.1| alanyl-tRNA synthetase [Escherichia coli B088]
gi|306905986|gb|EFN36507.1| alanyl-tRNA synthetase [Escherichia coli W]
gi|315061973|gb|ADT76300.1| alanyl-tRNA synthetase [Escherichia coli W]
gi|323180115|gb|EFZ65667.1| alanyl-tRNA synthetase [Escherichia coli OK1180]
gi|323377445|gb|ADX49713.1| alanyl-tRNA synthetase [Escherichia coli KO11FL]
gi|323946425|gb|EGB42453.1| alanyl-tRNA synthetase [Escherichia coli H120]
gi|324119946|gb|EGC13824.1| alanyl-tRNA synthetase [Escherichia coli E1167]
gi|331063097|gb|EGI35010.1| alanine--tRNA ligase [Escherichia coli TA271]
gi|332103001|gb|EGJ06347.1| alanyl-tRNA synthetase [Shigella sp. D9]
gi|371591982|gb|EHN80910.1| alanyl-tRNA synthetase [Escherichia coli H494]
gi|375322569|gb|EHS68319.1| alanyl-tRNA synthetase [Escherichia coli O157:H43 str. T22]
gi|378230302|gb|EHX90424.1| alanyl-tRNA synthetase [Escherichia coli DEC14D]
gi|383391924|gb|AFH16882.1| alanyl-tRNA synthetase [Escherichia coli KO11FL]
gi|383406239|gb|AFH12482.1| alanyl-tRNA synthetase [Escherichia coli W]
gi|385710983|gb|EIG47951.1| alanyl-tRNA synthetase [Escherichia coli B799]
gi|388346107|gb|EIL11850.1| alanyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
gi|388346600|gb|EIL12310.1| alanyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
gi|388347066|gb|EIL12763.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
gi|388349717|gb|EIL15185.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
gi|388362338|gb|EIL26361.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9570]
gi|388366862|gb|EIL30573.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
gi|388369166|gb|EIL32786.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9574]
gi|388377045|gb|EIL39893.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
gi|388396139|gb|EIL57267.1| alanyl-tRNA synthetase [Escherichia coli 541-15]
gi|388408278|gb|EIL68631.1| alanyl-tRNA synthetase [Escherichia coli 541-1]
gi|388421264|gb|EIL80882.1| alanyl-tRNA synthetase [Escherichia coli CUMT8]
gi|394383380|gb|EJE60980.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9634]
gi|394384619|gb|EJE62178.1| alanyl-tRNA ligase [Escherichia coli O26:H11 str. CVM10224]
gi|394385059|gb|EJE62604.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9602]
gi|394393913|gb|EJE70558.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
gi|394405776|gb|EJE80878.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
gi|394407236|gb|EJE82098.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
gi|394417237|gb|EJE90987.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
gi|394425709|gb|EJE98645.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
gi|412964031|emb|CCK47957.1| alanyl-tRNA synthetase [Escherichia coli chi7122]
gi|412970619|emb|CCJ45269.1| alanyl-tRNA synthetase [Escherichia coli]
gi|421934086|gb|EKT91864.1| alanyl-tRNA ligase [Escherichia coli O26:H11 str. CFSAN001629]
gi|421937233|gb|EKT94850.1| alanyl-tRNA ligase [Escherichia coli O111:H8 str. CFSAN001632]
gi|421940082|gb|EKT97562.1| alanyl-tRNA ligase [Escherichia coli O111:H11 str. CFSAN001630]
gi|430897453|gb|ELC19655.1| alanyl-tRNA synthetase [Escherichia coli KTE12]
gi|431309044|gb|ELF97321.1| alanyl-tRNA synthetase [Escherichia coli KTE48]
gi|431354098|gb|ELG40841.1| alanyl-tRNA synthetase [Escherichia coli KTE91]
gi|431360729|gb|ELG47328.1| alanyl-tRNA synthetase [Escherichia coli KTE101]
gi|431384238|gb|ELG68299.1| alanyl-tRNA synthetase [Escherichia coli KTE136]
gi|431384303|gb|ELG68363.1| alanyl-tRNA synthetase [Escherichia coli KTE135]
gi|431451941|gb|ELH32395.1| alanyl-tRNA synthetase [Escherichia coli KTE184]
gi|431469227|gb|ELH49157.1| alanyl-tRNA synthetase [Escherichia coli KTE203]
gi|431609160|gb|ELI78489.1| alanyl-tRNA synthetase [Escherichia coli KTE138]
gi|431645156|gb|ELJ12806.1| alanyl-tRNA synthetase [Escherichia coli KTE163]
gi|431655112|gb|ELJ22152.1| alanyl-tRNA synthetase [Escherichia coli KTE166]
gi|431714685|gb|ELJ78866.1| alanyl-tRNA synthetase [Escherichia coli KTE90]
gi|443423226|gb|AGC88130.1| alanyl-tRNA ligase [Escherichia coli APEC O78]
gi|449316507|gb|EMD06621.1| alanyl-tRNA ligase [Escherichia coli O08]
Length = 876
Score = 332 bits (852), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 259/813 (31%), Positives = 386/813 (47%), Gaps = 145/813 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I +I GVR I+ +TG+ +
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGA 703
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|416598023|ref|ZP_11782410.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322677738|gb|EFY73801.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
Length = 876
Score = 332 bits (852), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 253/818 (30%), Positives = 382/818 (46%), Gaps = 147/818 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ER+ +LQ+ S YD DLF L+E + KV+GA G +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLG-----------NK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA-----LLISEDVFKVKQGKLVK 350
S R+++D+ R +AD + P + LR ++R A +L +++ F K
Sbjct: 280 SLRVIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYK------ 333
Query: 351 ELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFN 410
L + E++G E++ +++ +L + E EQF
Sbjct: 334 -LVGPLIEVMGSAGEELKRQQAQVEQVL------------------------KTEEEQFA 368
Query: 411 IMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHE 470
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 369 RTLERGLAL----LDEELAKLQGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEA 423
Query: 471 AFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPC 526
FE + E +R +A+ AS + DY+ D+ S+ +
Sbjct: 424 GFEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDH 463
Query: 527 LDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQID 586
L+ N G V +D G ++++I A V + D+T YA +GGQ+
Sbjct: 464 LELN--GKVT---ALFVD---------GKAVEAINAGQEAVV--VLDQTPFYAESGGQVG 507
Query: 587 D------IGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDAR 640
D G + + TQ+ G+ IG L L + G+ V + +VD
Sbjct: 508 DKGELKGAGFTFAVDDTQKYGQA-IGHLGKLSAGALKVGDAVQA-----------DVDEA 555
Query: 641 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 699
R H+ +HL++AALR+VL T QK V +FS + E + + VE
Sbjct: 556 RRARIRLNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFNFS-HNEAMKPSEIRQVED 614
Query: 700 YINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGT 759
+N I + ++ M + + GE Y + V ++ + D S E C GT
Sbjct: 615 LVNAQIRRNLPIETNIMDLDAAKAKGAMALF-GEKYDERVRVLSMGD----FSTELCGGT 669
Query: 760 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
H TG I +I G+R I+ +TG+ + A V
Sbjct: 670 HASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATV 707
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLWVT 131
>gi|432675782|ref|ZP_19911237.1| alanyl-tRNA synthetase [Escherichia coli KTE142]
gi|431212957|gb|ELF10876.1| alanyl-tRNA synthetase [Escherichia coli KTE142]
Length = 876
Score = 332 bits (852), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 259/813 (31%), Positives = 386/813 (47%), Gaps = 145/813 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I +I GVR I+ +TG+ +
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGA 703
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|82545227|ref|YP_409174.1| alanyl-tRNA synthetase [Shigella boydii Sb227]
gi|416294458|ref|ZP_11650882.1| Alanyl-tRNA synthetase [Shigella flexneri CDC 796-83]
gi|417683289|ref|ZP_12332636.1| alanyl-tRNA synthetase [Shigella boydii 3594-74]
gi|420354261|ref|ZP_14855349.1| alanyl-tRNA synthetase [Shigella boydii 4444-74]
gi|421683857|ref|ZP_16123647.1| alanyl-tRNA synthetase [Shigella flexneri 1485-80]
gi|123558824|sp|Q31X62.1|SYA_SHIBS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|81246638|gb|ABB67346.1| alanyl-tRNA synthetase [Shigella boydii Sb227]
gi|320186483|gb|EFW61211.1| Alanyl-tRNA synthetase [Shigella flexneri CDC 796-83]
gi|332091817|gb|EGI96895.1| alanyl-tRNA synthetase [Shigella boydii 3594-74]
gi|391276188|gb|EIQ34964.1| alanyl-tRNA synthetase [Shigella boydii 4444-74]
gi|404337502|gb|EJZ63955.1| alanyl-tRNA synthetase [Shigella flexneri 1485-80]
Length = 876
Score = 332 bits (852), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 259/813 (31%), Positives = 386/813 (47%), Gaps = 145/813 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKDANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I +I GVR I+ +TG+ +
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGA 703
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|170701933|ref|ZP_02892858.1| alanyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
gi|170133166|gb|EDT01569.1| alanyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
Length = 874
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 239/806 (29%), Positives = 388/806 (48%), Gaps = 128/806 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG P PY R
Sbjct: 1 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HHTFFEMLGN+SF DY+K DA R A E LT
Sbjct: 60 ATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLT-TVYQ 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP D+L+ T + D+E DIW E+GVP + I + G NFW MG
Sbjct: 119 LPKDKLWVTVY--------QEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMG 170
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWN+VF+ R + + L
Sbjct: 171 DTGPCGPCTEIFYDHGPDVWGGPPGSP----EEDGDRYIEIWNLVFMQFNRDAQGNMTRL 226
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ERL +LQ+ S Y+ DLF L++ +V+ +DL +
Sbjct: 227 PKQSVDTGMGLERLAAVLQHVHSNYEIDLFQNLIKAAARVT------------EISDLTN 274
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELS 353
S ++++D+ R + + D + P + LR +VR A+ +K+ ++G +L
Sbjct: 275 NSLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHG---YKLGRKGSFFHKLV 331
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
++ +G YPE++++ E R+ D LR+ E E+F
Sbjct: 332 ADLVAEMGGAYPELKEA----------EQRVTDVLRQ--------------EEERFFETI 367
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
E G+ + L A+ + + G++AF L+DTYG ++ ++ + +T+ AF+
Sbjct: 368 EHGMSILEAALADVEAKGGKV--LDGELAFKLHDTYGFPLDLTADVCRERGMTVDEPAFD 425
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
+ ++R +A+AA K+K + + TF
Sbjct: 426 DAM--ARQREQARAAG------------------KFKATQGLEYTGAKTTFHGY------ 459
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
+++ D + G++++ ++ +A V + D T YA +GGQ+ D G+ L
Sbjct: 460 ----EEIAFDDAKVVALYVDGSAVNEVKAGQDAVV--VLDHTPFYAESGGQVGDQGL--L 511
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
N + + + + ++ +V + + G R E+DA R R H+ +H
Sbjct: 512 ANAST---RFAVADTLKVQADVVGHHGTLEQGTLKIGDVMRAEIDAHRRARTQRNHSATH 568
Query: 654 LLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYI-NDVIANQVQV 711
L++ ALR VL QK V +++ DF+ + ++ D + VE+ + N+++AN +
Sbjct: 569 LMHKALREVLGAHVQQKGSLVDAEKTRFDFA-HNAPMTDDEIRRVEQIVNNEILANAPGI 627
Query: 712 DRRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHI 767
R +P+ + + GE Y D+V ++D+ SRE C GTHV TG I
Sbjct: 628 VRV------MPYDEAVKGGAMALFGEKYGDEVRVLDLG-----FSRELCGGTHVHRTGDI 676
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSS 793
++ G+R ++ +TGD++
Sbjct: 677 GFFKIVVEGGVAAGIRRVEAITGDNA 702
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG P PY R +Q+ +R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQRSVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA R A E LT LP D+L+ T
Sbjct: 88 FFEMLGNFSFGDYFKHDAIRFAWELLT-TVYQLPKDKLWVT 127
>gi|107022482|ref|YP_620809.1| alanyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
gi|105892671|gb|ABF75836.1| alanyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
Length = 897
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 239/805 (29%), Positives = 387/805 (48%), Gaps = 126/805 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG P PY R
Sbjct: 24 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSR 82
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HH FFEMLGN+SF DY+K DA + A E LT
Sbjct: 83 ATTAQRSVRAGGKHNDLENVGYTARHHAFFEMLGNFSFGDYFKHDAIKFAWELLT-TVYQ 141
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP D+L+ T + D+E DIW E+GVP + I + G NFW MG
Sbjct: 142 LPKDKLWVTVY--------QEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMG 193
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWN+VF+ R + + L
Sbjct: 194 DTGPCGPCTEIFYDHGPDVWGGPPGSP----EEDGDRYIEIWNLVFMQFNRDAQGNMTRL 249
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ERL +LQ+ S Y+ DLF L+ K R S+ T +
Sbjct: 250 PKQSVDTGMGLERLAAVLQHVHSNYEIDLFQNLI---------KAAARVTEISDLT--NN 298
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELSY 354
S ++++D+ R + + D + P + LR +VR A+ +K+ ++G +L
Sbjct: 299 SLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAI---RHGYKLGRKGAFFHKLVA 355
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
++ +G YPE++++ E R+ D LR+ E E+F E
Sbjct: 356 DLVAEMGTAYPELKEA----------EQRVTDVLRQ--------------EEERFFETIE 391
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
G+ + L + A+ + + G++AF L+DTYG ++ ++ + +T+ AF+
Sbjct: 392 HGMSILEAALAEVEAKGGKV--LDGELAFKLHDTYGFPLDLTADVCRERGMTVDEPAFDD 449
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ ++R +A+AA K+K + + + TF
Sbjct: 450 AM--ARQREQARAAG------------------KFKATQGLEYSGAKTTFHGY------- 482
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+++ D + G++++ ++ +A V + D T YA +GGQ+ D GV L
Sbjct: 483 ---EEIAFDDAKVVALYVDGSAVNEVKAGQDAVV--VLDHTPFYAESGGQVGDQGV--LA 535
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
N + + + ++ ++ + + G R E+DA+ R R H+ +HL
Sbjct: 536 NAAT---RFAVADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHL 592
Query: 655 LNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYI-NDVIANQVQVD 712
++ ALR VL QK V +D+ DF+ + ++ D + VE+ + N+++AN +
Sbjct: 593 MHKALREVLGAHVQQKGSLVDADKTRFDFA-HNAPMTDDEIRRVEQIVNNEILANAPGIV 651
Query: 713 RRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIE 768
R +P+ + + GE Y D+V ++D+ SRE C GTHV TG I
Sbjct: 652 RV------MPYDEAVKGGAMALFGEKYGDEVRVLDLG-----FSRELCGGTHVHRTGDIG 700
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSS 793
++ G+R ++ +TGD++
Sbjct: 701 LFKIVVEGGVAAGIRRVEAITGDNA 725
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG P PY R +Q+ +R GGKHNDL G + HH
Sbjct: 51 VPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQRSVRAGGKHNDLENVGYTARHHA 110
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT LP D+L+ T
Sbjct: 111 FFEMLGNFSFGDYFKHDAIKFAWELLT-TVYQLPKDKLWVT 150
>gi|407470556|ref|YP_006783001.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407480782|ref|YP_006777931.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410481348|ref|YP_006768894.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|417806210|ref|ZP_12453156.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
gi|417833962|ref|ZP_12480409.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 01-09591]
gi|417866755|ref|ZP_12511795.1| alaS [Escherichia coli O104:H4 str. C227-11]
gi|422988787|ref|ZP_16979560.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. C227-11]
gi|422995679|ref|ZP_16986443.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. C236-11]
gi|423000827|ref|ZP_16991581.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 09-7901]
gi|423004496|ref|ZP_16995242.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 04-8351]
gi|423010996|ref|ZP_17001730.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-3677]
gi|423020224|ref|ZP_17010933.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4404]
gi|423025390|ref|ZP_17016087.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4522]
gi|423031211|ref|ZP_17021898.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4623]
gi|423039036|ref|ZP_17029710.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423044156|ref|ZP_17034823.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423045884|ref|ZP_17036544.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423054423|ref|ZP_17043230.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423061398|ref|ZP_17050194.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C5]
gi|429720253|ref|ZP_19255180.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429772153|ref|ZP_19304173.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02030]
gi|429777098|ref|ZP_19309073.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429785825|ref|ZP_19317720.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02092]
gi|429791715|ref|ZP_19323569.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02093]
gi|429792563|ref|ZP_19324412.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02281]
gi|429799139|ref|ZP_19330937.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02318]
gi|429802756|ref|ZP_19334516.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02913]
gi|429812552|ref|ZP_19344235.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03439]
gi|429813100|ref|ZP_19344779.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-04080]
gi|429818307|ref|ZP_19349942.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03943]
gi|429904659|ref|ZP_19370638.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429908797|ref|ZP_19374761.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429914669|ref|ZP_19380616.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429919699|ref|ZP_19385630.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429925519|ref|ZP_19391432.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429929455|ref|ZP_19395357.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429935994|ref|ZP_19401880.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429941674|ref|ZP_19407548.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429944355|ref|ZP_19410217.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429951913|ref|ZP_19417759.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429955262|ref|ZP_19421094.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0466]
gi|340733606|gb|EGR62737.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 01-09591]
gi|340739505|gb|EGR73740.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
gi|341920044|gb|EGT69653.1| alaS [Escherichia coli O104:H4 str. C227-11]
gi|354862514|gb|EHF22952.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. C236-11]
gi|354867798|gb|EHF28220.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. C227-11]
gi|354868196|gb|EHF28614.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 04-8351]
gi|354873798|gb|EHF34175.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 09-7901]
gi|354880479|gb|EHF40815.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-3677]
gi|354888313|gb|EHF48572.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4404]
gi|354892221|gb|EHF52430.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4522]
gi|354893427|gb|EHF53630.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354896230|gb|EHF56401.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4623]
gi|354897607|gb|EHF57764.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354911459|gb|EHF71463.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354914583|gb|EHF74566.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354916365|gb|EHF76337.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C4]
gi|406776510|gb|AFS55934.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407053079|gb|AFS73130.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2011C-3493]
gi|407066591|gb|AFS87638.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|429347355|gb|EKY84128.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02092]
gi|429358391|gb|EKY95060.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02030]
gi|429360447|gb|EKY97105.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02093]
gi|429361204|gb|EKY97860.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429363815|gb|EKZ00440.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02318]
gi|429375860|gb|EKZ12392.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02281]
gi|429377778|gb|EKZ14293.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03439]
gi|429389423|gb|EKZ25843.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02913]
gi|429393592|gb|EKZ29983.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03943]
gi|429403261|gb|EKZ39545.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-04080]
gi|429405748|gb|EKZ42012.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429408629|gb|EKZ44864.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429413065|gb|EKZ49254.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429415794|gb|EKZ51952.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429419475|gb|EKZ55610.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429430954|gb|EKZ67004.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429434990|gb|EKZ71010.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429437216|gb|EKZ73223.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429442333|gb|EKZ78290.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429446483|gb|EKZ82411.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429450688|gb|EKZ86581.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429456161|gb|EKZ92007.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0466]
Length = 876
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 259/813 (31%), Positives = 386/813 (47%), Gaps = 145/813 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G ++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFAVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I +I GVR I+ +TG+ +
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGA 703
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|171321470|ref|ZP_02910415.1| alanyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
gi|171093253|gb|EDT38456.1| alanyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
Length = 874
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 240/806 (29%), Positives = 387/806 (48%), Gaps = 128/806 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG P PY R
Sbjct: 1 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HHTFFEMLGN+SF DY+K DA R A E LT
Sbjct: 60 ATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLT-TVYQ 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP D+L+ T + D+E DIW E+GVP + I + G NFW MG
Sbjct: 119 LPKDKLWVTVY--------QEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMG 170
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWN+VF+ R + + L
Sbjct: 171 DTGPCGPCTEIFYDHGPDVWGGPPGSP----EEDGDRYIEIWNLVFMQFNRDAQGNMTRL 226
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ERL +LQ+ S Y+ DLF L++ +V+ +DL +
Sbjct: 227 PKQSVDTGMGLERLAAVLQHVHSNYEIDLFQNLIKAAARVT------------EISDLTN 274
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELS 353
S ++++D+ R + + D + P + LR +VR A+ +K+ ++G +L
Sbjct: 275 NSLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHG---YKLGRKGSFFHKLV 331
Query: 354 YNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIME 413
++ +G YPE++++ E R+ D LR+ E E+F
Sbjct: 332 ADLVAEMGAAYPELKEA----------EQRVTDVLRQ--------------EEERFFETI 367
Query: 414 EPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFE 473
E G+ + L A+ + + G++AF L+DTYG ++ ++ + +T+ AF+
Sbjct: 368 EHGMSILEAALADVEAKGGKV--LDGELAFKLHDTYGFPLDLTADVCRERGMTVDEPAFD 425
Query: 474 QKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVG 533
+ ++R +A+AA K+K + + TF
Sbjct: 426 DAM--ARQREQARAAG------------------KFKATQGLEYTGAKTTFHGY------ 459
Query: 534 IVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYL 593
+++ D + G++++ ++ +A V + D T YA +GGQ+ D GV L
Sbjct: 460 ----EEIAFDDAKVVALYVDGSAVNEVKAGQDAVV--VLDHTPFYAESGGQVGDQGV--L 511
Query: 594 TNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSH 653
N + + + ++ +V + + G R E+DA R R H+ +H
Sbjct: 512 ANAAT---RFAVADTLKVQADVVGHHGTLEQGTLKIGDVLRAEIDAHRRARTQRNHSATH 568
Query: 654 LLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYI-NDVIANQVQV 711
L++ ALR VL QK V +++ DF+ + ++ D + VE+ + N+++AN +
Sbjct: 569 LMHKALREVLGAHVQQKGSLVDAEKTRFDFA-HNAPMTDDEIRRVEQIVNNEILANAPGI 627
Query: 712 DRRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHI 767
R +P+ + + GE Y D+V ++D+ SRE C GTHV TG I
Sbjct: 628 VRV------MPYDEAVKGGAMALFGEKYGDEVRVLDLG-----FSRELCGGTHVHRTGDI 676
Query: 768 ESCTVIGYKSYNHGVRSIKCLTGDSS 793
++ G+R ++ +TGD++
Sbjct: 677 GFFKIVVEGGVAAGIRRVEAITGDNA 702
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG P PY R +Q+ +R GGKHNDL G + HHT
Sbjct: 28 VPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQRSVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA R A E LT LP D+L+ T
Sbjct: 88 FFEMLGNFSFGDYFKHDAIRFAWELLT-TVYQLPKDKLWVT 127
>gi|406941160|gb|EKD73722.1| hypothetical protein ACD_45C00211G0001 [uncultured bacterium]
Length = 859
Score = 332 bits (851), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 255/808 (31%), Positives = 386/808 (47%), Gaps = 140/808 (17%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP 70
+L + IRS FL+YF + QGH +V SS +VP D ++ F N+GM QFK+VFLG PY
Sbjct: 5 KLSANQIRSLFLNYFHD-QGHEIVASSSLVPGNDPTLLFTNAGMVQFKDVFLGKEERPYK 63
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
R +SQ CVR GGKHNDL G + HHTFFEMLGN+SF DY+KRDA R+A EFLT+ +
Sbjct: 64 RAVSSQCCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIRLAWEFLTR-IL 122
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCG 189
+LP ++L+ T + D+E +IWL E+ + + G NFW MG TGPCG
Sbjct: 123 NLPPEKLWITVY--------QDDDEAANIWLNEIKIDPARFTRCGESSNFWSMGPTGPCG 174
Query: 190 YSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYID 244
+EI YD M G P + + + + +EIWN+VF+ + R + + PL K +D
Sbjct: 175 PCAEIFYDHGAGIMGGPPGTP----DEEGDRYVEIWNLVFMQYDRAADGSRTPLPKPSVD 230
Query: 245 TGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-DTSYRML 303
TG+G ER+ ++Q + YDTDLF L++ I K+ ++ TDL +TS R++
Sbjct: 231 TGMGLERIAAVVQGVHNNYDTDLFRGLIKLIAKL------------AHMTDLSNTSLRVI 278
Query: 304 SDYSRMITVALADNMFP--DATAKLRNVVRDALLISEDVFKVKQG---KLVKELSYNIAE 358
+D+ R + D + P + + + L + V Q KLVK L + E
Sbjct: 279 ADHIRSCAFLITDGVVPANEGRGYVLRRIIRRALRHGNKLSVDQPFFYKLVKPL---VTE 335
Query: 359 ILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLV 418
+G+ YPE++ + I+ IL +E EQF++ GL
Sbjct: 336 -MGEAYPELRKAQIHIETILKQEE------------------------EQFSLTLAQGL- 369
Query: 419 LGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNE 478
L +Q+ + + T I G F LYDTYG ++ ++A + L + + FE ++
Sbjct: 370 ----KLFEQVTNELTGTLIPGSTVFKLYDTYGFPVDLTADMARERHLQIDLDGFETEMT- 424
Query: 479 LKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGD 538
K+R +++ AS K+ DY T S P T VG
Sbjct: 425 -KQRDRSRQAS------------------KFATDYTIATGS----HPA--TKFVGY---K 456
Query: 539 QVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT-- 596
+ + R G +D++Q V I D+T YA +GGQI D G + N
Sbjct: 457 NLLTEKSKIVALYRDGKKVDALQTAEQGVV--ILDRTPFYAESGGQIGDQGTLRIHNNLF 514
Query: 597 ----TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTS 652
TQ+ G+ + L IV G+ + +TP EVDA R + HT +
Sbjct: 515 RVQDTQKQGQ------SYLHVGIVEKGHFATGDDLTP------EVDANRRAATVLNHTAT 562
Query: 653 HLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI-ANQVQ 710
HLL+ LR +L T QK V + DF+ + L+ D + +E+ +N+ I AN
Sbjct: 563 HLLHRVLRSLLGTHVMQKGSLVEPERLRFDFT-HSTPLNTDELKQIEQRVNEEIRANHAA 621
Query: 711 VDR-----RHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTG 765
+ R +++ L + Y D+V ++ + S E C GTH +TG
Sbjct: 622 IVRVTNPTEAIQSGALGLFE-------DKYGDEVRVVQFGE-----SMELCGGTHADHTG 669
Query: 766 HIESCTVIGYKSYNHGVRSIKCLTGDSS 793
+I + GVR I+ +TG+ +
Sbjct: 670 NIGIFKITSESGVAAGVRRIEAVTGEGA 697
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VFLG PY R +SQ C+R GGKHNDL G + HHT
Sbjct: 33 VPGNDPTLLFTNAGMVQFKDVFLGKEERPYKRAVSSQCCVRAGGKHNDLENVGYTARHHT 92
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+KRDA R+A EFLT+ ++LP ++L+ T
Sbjct: 93 FFEMLGNFSFGDYFKRDAIRLAWEFLTR-ILNLPPEKLWIT 132
>gi|392951173|ref|ZP_10316728.1| alanyl-tRNA synthetase [Hydrocarboniphaga effusa AP103]
gi|391860135|gb|EIT70663.1| alanyl-tRNA synthetase [Hydrocarboniphaga effusa AP103]
Length = 895
Score = 332 bits (851), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 253/821 (30%), Positives = 375/821 (45%), Gaps = 136/821 (16%)
Query: 10 VRLC-SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAP 68
VR+ S +R+ +L +F HT+V SSP+VP D ++ F N+GM QFK+VF G P
Sbjct: 12 VRIVNSNELRAKYLAFFAQKD-HTVVPSSPLVPGNDPTLLFTNAGMVQFKDVFTGREKRP 70
Query: 69 YPRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLT-K 127
Y R +SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA A EF+T K
Sbjct: 71 YTRATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKDAIHYAWEFITGK 130
Query: 128 PPVSLPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNF 179
+ L RL T + D+E IW E+GVP + I + G NF
Sbjct: 131 DWLGLDPQRLCVTVY--------QEDDEAYAIWRDEIGVPVERIIRIGDNKGARYASDNF 182
Query: 180 WEMGSTGPCGYSSEIHYDMKGEPSSAL-----ARVNADRNDLIEIWNIVFISHKRVSADT 234
W MG TGPCG +EI YD + S + D + IEIWN+VF+ ++R T
Sbjct: 183 WSMGDTGPCGPCTEIFYDHDPDGSKGIWGGMPGSPEEDGDRWIEIWNVVFMQYERSKDGT 242
Query: 235 IVPLSKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRT 294
+ PL K +DTG+G ER+ +LQ + YD D+F+ L+ + K++ P
Sbjct: 243 MTPLPKPSVDTGMGLERISAVLQGVHNNYDIDIFVALIAAVAKLANVDPKS--------- 293
Query: 295 DLDTSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDA------LLISEDVFKVKQ 345
S ++++D+ R + + D + P + LR ++R A L + E F
Sbjct: 294 --SASLKVIADHIRATSFLICDGVMPSNEGRGYVLRRIMRRAIRHGYKLGLDEAFFY--- 348
Query: 346 GKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPE 405
KLV L AE++G+ YPE++ E+ + + KA E
Sbjct: 349 -KLVAPL----AEVMGEAYPELR-----------EKQALLEKTIKA-------------E 379
Query: 406 LEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKL 465
+ F I + G+ K L + +A+ S I GD+ F LYDTYG ++ ++A ++L
Sbjct: 380 EDSFAITLDKGM----KLLDEAIAKLGSEKTIPGDVVFKLYDTYGFPLDLTADIAREREL 435
Query: 466 TLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFP 525
+ +E+++ +ER A+AAS + +LKH + YD
Sbjct: 436 AIDEAGYEREMQAQRER--ARAASKFGGAE--ELKHTGEASSFHGYD----------ALT 481
Query: 526 CLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQI 585
N+ I R G + S+ A + + D T YA GGQ+
Sbjct: 482 HEAANISAIY----------------RDGKPVASLDAGDEAVI--VLDHTPFYAEGGGQV 523
Query: 586 DDIG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDA 639
D G ++ T + G G LE + G VS+ VD
Sbjct: 524 GDRGTLTAGDAKFVVTDTIKVGNGGFGHRGKLESGSLKIGARVSA-----------AVDE 572
Query: 640 RMRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVE 698
+R R H+ +HLL+ ALR VL T QK V DFS +G L+ D + +E
Sbjct: 573 ALRAATQRNHSATHLLHRALREVLGTHVAQKGSLVDEQRTRFDFS-HGAALTADEIKQIE 631
Query: 699 KYINDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCG 758
+N + V V M + + + GE Y D+V ++ + D S E C G
Sbjct: 632 HRVNKAVLANVPVAATLM-GYDAAIESGAMALFGEKYGDEVRVLAMGD----FSTELCGG 686
Query: 759 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN 799
THV TG I ++ GVR I+ +TG+++ A V N
Sbjct: 687 THVTRTGDIGLFKIVSEGGVAAGVRRIEAITGENALAYVGN 727
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFK+VF G PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 42 VPGNDPTLLFTNAGMVQFKDVFTGREKRPYTRATSSQRCVRAGGKHNDLENVGYTARHHT 101
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLT-KPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K+DA A EF+T K + L RL T
Sbjct: 102 FFEMLGNFSFGDYFKKDAIHYAWEFITGKDWLGLDPQRLCVT 143
>gi|77359489|ref|YP_339064.1| alanyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
gi|123589570|sp|Q3ILF3.1|SYA_PSEHT RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|76874400|emb|CAI85621.1| alanyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
Length = 868
Score = 332 bits (851), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 252/799 (31%), Positives = 374/799 (46%), Gaps = 117/799 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FLD+F + Q H +V SS ++P D ++ F N+GM QFK+VFLG PY R
Sbjct: 4 MTTAQIRQQFLDFFASKQ-HQVVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYTR 62
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K+DA + A +FLT+ V
Sbjct: 63 ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWQFLTE-EVK 121
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
LP ++L T + DEE + W ++G+P D I + NFW MG TGPCG
Sbjct: 122 LPKEKLLVTIY--------HDDEEAFNYWSNDIGLPADRIIRIATADNFWSMGDTGPCGP 173
Query: 191 SSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDT 245
SEI YD G P S D + IEIWN+VF+ + R + T++PL K +DT
Sbjct: 174 CSEIFYDHGEHIWGGPPGSP----EEDGDRFIEIWNLVFMQYNRQNDGTMLPLPKQSVDT 229
Query: 246 GLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSD 305
G+G ER+ ILQ S Y+ DLF L+ V+ A+ D S R+++D
Sbjct: 230 GMGLERIAAILQGVHSNYEIDLFKGLIAAAASVTNAQDMD-----------DKSLRVVAD 278
Query: 306 YSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGD 362
+ R ++D + P + LR ++R A+ + QG +L + E +G
Sbjct: 279 HIRSCAFLISDGVMPSNEGRGYVLRRIIRRAVRHGNKLG--AQGAFFYKLVAALIEQMGQ 336
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
YPE+ I+ +L RI E EQF E GL +
Sbjct: 337 AYPELAKQQEIIEKVL----RI--------------------EEEQFGKTLERGLAI--- 369
Query: 423 YLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKER 482
L + L+ D I GD+ F LYDTYG ++ ++A +++T+ ++ FE+ + +R
Sbjct: 370 -LEESLS-DLKGDVIPGDLVFKLYDTYGFPADLTADVARERQMTIDNKGFEECM--AVQR 425
Query: 483 SKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
A+ A K +D+ K D T K YT +V +VF
Sbjct: 426 KTAQQAG----------KFGADYNDQLKSDKQ--TTYKGYTTTSHSATVV------EVF- 466
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGL-IFDKTNLYATAGGQIDDIGVAYLTNTTQENG 601
A +S+ L + G+ I D+T YA +GGQ+ D GV + G
Sbjct: 467 ------------AGSESVSLLEDGQKGIVILDRTPFYAESGGQVGDTGVISVA-----GG 509
Query: 602 KVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVE--VDARMRLGCMRAHTTSHLLNAAL 659
+ + L H G V GL +VE +D R + HT +H+L+ L
Sbjct: 510 EFTVTNTTKLGNAFAHHGIVQGRI----GLNDKVEATIDDARRERIKKNHTATHILHETL 565
Query: 660 RRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
R++L QK V ++ DFS + E ++ + + +E+ +ND I + M
Sbjct: 566 RQLLGEHVGQKGSLVQAERLRFDFSHF-EAVTKEELREIERVVNDEIRCNFALSTELMAI 624
Query: 719 SELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ + + GE Y D+V ++ I D S E C GTHV G I ++
Sbjct: 625 DDAKAKGAMALF-GEKYDDEVRVVTIGD----YSIELCGGTHVERAGDIGLFKIVSESGI 679
Query: 779 NHGVRSIKCLTGDSSKAAV 797
GVR I+ +TG + A V
Sbjct: 680 AAGVRRIEAVTGADAIAYV 698
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
IP D ++ F N+GM QFK+VFLG PY R +SQ+C+R GGKHNDL G + HHT
Sbjct: 31 IPGNDATLLFNNAGMVQFKDVFLGAESRPYTRATSSQRCVRAGGKHNDLENVGYTARHHT 90
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFTF 919
FFEMLGN+SF DY+K+DA + A +FLT+ V LP ++L T
Sbjct: 91 FFEMLGNFSFGDYFKQDAIKFAWQFLTE-EVKLPKEKLLVTI 131
>gi|417123258|ref|ZP_11972168.1| alanine--tRNA ligase [Escherichia coli 97.0246]
gi|386146649|gb|EIG93094.1| alanine--tRNA ligase [Escherichia coli 97.0246]
Length = 876
Score = 332 bits (851), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 259/813 (31%), Positives = 387/813 (47%), Gaps = 145/813 (17%)
Query: 13 CSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRV 72
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 4 STAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRA 62
Query: 73 ANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VS 131
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +
Sbjct: 63 TTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFA 122
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMG 183
LP +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 123 LPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMG 174
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 175 DTGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPL 230
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-D 297
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 231 PKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSN 278
Query: 298 TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KE 351
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 279 KSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKET 329
Query: 352 LSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNI 411
Y + L DV + + + Q A V++ ++KT E EQF
Sbjct: 330 FFYKLVGPLIDVMGSAGEDLKRQQ---------------AQVEQ---VLKT--EEEQFAR 369
Query: 412 MEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEA 471
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + +
Sbjct: 370 TLERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAG 424
Query: 472 FEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYH----YDTNSKRYTFPCL 527
FE + E +R +A+ AS + DY+ D+ S+ + L
Sbjct: 425 FEAAMEE--QRRRAREASG------------------FGADYNAMIRVDSASEFKGYDHL 464
Query: 528 DTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDD 587
+ N G V +D G ++D+I A V + D+T YA +GGQ+ D
Sbjct: 465 ELN--GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPYYAESGGQVGD 508
Query: 588 IG------VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
G +++ TQ+ G+ IG + L + G+ V + +VD
Sbjct: 509 KGELKGANFSFVVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEAR 556
Query: 642 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R H+ +HL++AALR+VL T QK V DFS + E + + + AVE
Sbjct: 557 RARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDL 615
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTH 760
+N I + ++ M E + GE Y + V ++ + D S E C GTH
Sbjct: 616 VNAQIRRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTH 670
Query: 761 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSS 793
TG I +I GVR I+ +TG+ +
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGA 703
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|187735876|ref|YP_001877988.1| alanyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
gi|205829974|sp|B2UKT4.1|SYA_AKKM8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|187425928|gb|ACD05207.1| alanyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
Length = 942
Score = 332 bits (851), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 253/841 (30%), Positives = 384/841 (45%), Gaps = 122/841 (14%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPY-- 69
+ + IR SFLD+F Q HT+V S+ ++P + F N+GM QF FLG+ P+
Sbjct: 2 MTATEIRQSFLDFFREKQ-HTVVPSASLMPQ-SPGLLFTNAGMNQFVPYFLGVWTPPWTP 59
Query: 70 PRVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP 129
R ++QKC+R GGKHNDL G DSYHHTFFEMLGNWSF DY+KR+A R A E + +
Sbjct: 60 ARATDTQKCIRAGGKHNDLEDVGYDSYHHTFFEMLGNWSFGDYFKREAIRWAWELVVER- 118
Query: 130 VSLPLDRLYFTYFGGSDQYGLPC--DEETRDIWLEL----GV-PRDHIKKEGMKCNFWEM 182
P +RLY T + G P D E D W EL G+ P HI +K NFW M
Sbjct: 119 WGFPAERLYATVYAPDKSKGDPGEFDREAWDFWAELFRSRGLDPDVHIVHGNVKDNFWMM 178
Query: 183 GSTGPCGYSSEIHYDMKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNY 242
G TGPCG SE+H D+ E ++ + VN D + IEIWN+VFI + S ++ L +
Sbjct: 179 GETGPCGPCSELHVDLTPEGNTKGSLVNKDSDQCIEIWNLVFIQYNAESDGSMRNLPACH 238
Query: 243 IDTGLGFERLVTILQ---------NKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTT--S 291
+DTG+GFER +I+Q K S Y TD+F PL + +E +SG K Y + S
Sbjct: 239 VDTGMGFERACSIMQCTNGFKDFSRKPSNYATDVFRPLFDRLEVLSGRK-YADVYPAPGS 297
Query: 292 NRTDLD-------TSYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVF 341
R D + ++R+++D+ R ++ ++AD + P + LR ++R A+ +
Sbjct: 298 KRVDAEDGTLQEAIAFRVIADHLRTLSFSIADGILPGNNGRNYVLRRILRRAVRYGRRLG 357
Query: 342 KVKQGKLVKELSYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVK 401
+ + EL + E G V+PE+ ++ +L E F+
Sbjct: 358 FTQ--PFLAELVDTLVESFGQVFPELAARATTVKEVLNREEASFNETLDRG--------- 406
Query: 402 TQPELEQFNIMEEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAA 461
LE F+ A S ++SG+ AF LYDTYG ++ LA
Sbjct: 407 ----LELFD------------------AETASAGKVSGEFAFKLYDTYGFPIDLTALLAE 444
Query: 462 AKKLTLCHEAFEQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKR 521
+ L + E F + + E +ER++A S V + +DLK VT+ YD +
Sbjct: 445 ERGLDIDMERFNRLMEEQRERARAARKSEV--VRALDLKTDAVTEFT-----GYDVDE-- 495
Query: 522 YTFPCLDTNLVGIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATA 581
C T L GD +F +I DKT YA
Sbjct: 496 ----CAATVLEVSRQGDSLF----------------------------IITDKTPFYAEM 523
Query: 582 GGQIDDIGVAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARM 641
GGQ+ D G+ + + + + + H +V PG + +DA
Sbjct: 524 GGQVSDAGLIEIGGES-----YHVMAVQQIGNARAHVVEARPGLEVKPGDRVHLSIDAER 578
Query: 642 RLGCMRAHTTSHLLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 700
R HT +HLL+ AL +V++ Q+ V D DF+ +S D + +E+
Sbjct: 579 RRRIEAHHTATHLLHCALHQVVSPDAAQQGSFVSEDRLRFDFN--SSAVSPDQLRLIEEK 636
Query: 701 INDVIANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDIS---DKENVISREPCC 757
+N I + V +++ + G+ Y D V ++ + D + +S E C
Sbjct: 637 VNGWIEESLPVHCTERAYADVKGNAAIAQFFGDKYGDVVRVVQVGGCRDGLDGVSMEFCG 696
Query: 758 GTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGDSSKAAVEN---GKHLSTAASFSQILN 814
GTH+ NT +I + + GVR I+ +TGD++ + K L A + +I
Sbjct: 697 GTHIANTKNIGLFKIKSEGAIASGVRRIEAMTGDAALEMIRQHVVAKSLEIAKAVEKIKE 756
Query: 815 V 815
V
Sbjct: 757 V 757
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 64/97 (65%), Gaps = 3/97 (3%)
Query: 824 SIAFVNSGMCQFKNVFLGLTPAPY--PRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFEM 881
+ F N+GM QF FLG+ P+ R ++QKCIR GGKHNDL G DSYHHTFFEM
Sbjct: 34 GLLFTNAGMNQFVPYFLGVWTPPWTPARATDTQKCIRAGGKHNDLEDVGYDSYHHTFFEM 93
Query: 882 LGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
LGNWSF DY+KR+A R A E + + P +RLY T
Sbjct: 94 LGNWSFGDYFKREAIRWAWELVVE-RWGFPAERLYAT 129
>gi|205830050|sp|Q1BX19.2|SYA_BURCA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 874
Score = 332 bits (851), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 239/805 (29%), Positives = 387/805 (48%), Gaps = 126/805 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + IR FL +F ++GHT+V+SS +VP D ++ F NSGM QFK+VFLG P PY R
Sbjct: 1 MKAAEIREKFLKFF-ESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVS 131
+Q+ VR GGKHNDL G + HH FFEMLGN+SF DY+K DA + A E LT
Sbjct: 60 ATTAQRSVRAGGKHNDLENVGYTARHHAFFEMLGNFSFGDYFKHDAIKFAWELLT-TVYQ 118
Query: 132 LPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEMG 183
LP D+L+ T + D+E DIW E+GVP + I + G NFW MG
Sbjct: 119 LPKDKLWVTVY--------QEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTMG 170
Query: 184 STGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPL 238
TGPCG +EI YD G P S D + IEIWN+VF+ R + + L
Sbjct: 171 DTGPCGPCTEIFYDHGPDVWGGPPGSP----EEDGDRYIEIWNLVFMQFNRDAQGNMTRL 226
Query: 239 SKNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDT 298
K +DTG+G ERL +LQ+ S Y+ DLF L+ K R S+ T +
Sbjct: 227 PKQSVDTGMGLERLAAVLQHVHSNYEIDLFQNLI---------KAAARVTEISDLT--NN 275
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKV-KQGKLVKELSY 354
S ++++D+ R + + D + P + LR +VR A+ +K+ ++G +L
Sbjct: 276 SLKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHG---YKLGRKGAFFHKLVA 332
Query: 355 NIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEE 414
++ +G YPE++++ E R+ D LR+ E E+F E
Sbjct: 333 DLVAEMGTAYPELKEA----------EQRVTDVLRQ--------------EEERFFETIE 368
Query: 415 PGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQ 474
G+ + L + A+ + + G++AF L+DTYG ++ ++ + +T+ AF+
Sbjct: 369 HGMSILEAALAEVEAKGGKV--LDGELAFKLHDTYGFPLDLTADVCRERGMTVDEPAFDD 426
Query: 475 KLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGI 534
+ ++R +A+AA K+K + + + TF
Sbjct: 427 AM--ARQREQARAAG------------------KFKATQGLEYSGAKTTFHGY------- 459
Query: 535 VIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLT 594
+++ D + G++++ ++ +A V + D T YA +GGQ+ D GV L
Sbjct: 460 ---EEIAFDDAKVVALYVDGSAVNEVKAGQDAVV--VLDHTPFYAESGGQVGDQGV--LA 512
Query: 595 NTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHL 654
N + + + ++ ++ + + G R E+DA+ R R H+ +HL
Sbjct: 513 NAAT---RFAVADTLKVQADVIGHHGTLEQGTLKVGDVLRAEIDAQRRARTQRNHSATHL 569
Query: 655 LNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYI-NDVIANQVQVD 712
++ ALR VL QK V +D+ DF+ + ++ D + VE+ + N+++AN +
Sbjct: 570 MHKALREVLGAHVQQKGSLVDADKTRFDFA-HNAPMTDDEIRRVEQIVNNEILANAPGIV 628
Query: 713 RRHMRASELPFLTHLT----VIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIE 768
R +P+ + + GE Y D+V ++D+ SRE C GTHV TG I
Sbjct: 629 RV------MPYDEAVKGGAMALFGEKYGDEVRVLDLG-----FSRELCGGTHVHRTGDIG 677
Query: 769 SCTVIGYKSYNHGVRSIKCLTGDSS 793
++ G+R ++ +TGD++
Sbjct: 678 LFKIVVEGGVAAGIRRVEAITGDNA 702
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFK+VFLG P PY R +Q+ +R GGKHNDL G + HH
Sbjct: 28 VPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRATTAQRSVRAGGKHNDLENVGYTARHHA 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT LP D+L+ T
Sbjct: 88 FFEMLGNFSFGDYFKHDAIKFAWELLT-TVYQLPKDKLWVT 127
>gi|56696902|ref|YP_167264.1| alanyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
gi|81558517|sp|Q5LRU1.1|SYA_SILPO RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|56678639|gb|AAV95305.1| alanyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
Length = 890
Score = 332 bits (851), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 252/814 (30%), Positives = 373/814 (45%), Gaps = 107/814 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FL+YF QGHT+V SSP+VP D ++ F NSGM QFKN F G+ Y R +Q
Sbjct: 7 IRSTFLNYFAK-QGHTIVPSSPLVPRNDPTLMFTNSGMVQFKNCFTGVDKRDYVRATTAQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K +A A E +T+ +P DR
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKSEAIPFAWELITR-DFDIPKDR 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIHY 196
LY T + D+E +IW ++GVP I + NFW+MG TGPCG +EI Y
Sbjct: 125 LYTTVY--------HTDDEAFEIWKKVGVPESRIIRIATSDNFWQMGPTGPCGPCTEIFY 176
Query: 197 D-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFER 251
D G P S D + IEIWNIVF+ +++ ++V L IDTG+G ER
Sbjct: 177 DHGDHIWGGPPGSP----EEDGDRFIEIWNIVFMQNEKFEDGSMVDLDMQSIDTGMGLER 232
Query: 252 LVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMIT 311
+ +LQ YDTDLF L+E + PYG D + +R+++D+ R +
Sbjct: 233 IGALLQGSHDNYDTDLFKALIEASADATSVDPYG---------DQNVHHRVIADHLRSTS 283
Query: 312 VALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEIQ 368
+AD + P + LR ++R A+ A +LG P +
Sbjct: 284 FLIADGVMPSNDGRGYVLRRIMRRAM--------------------RHAHLLGAKDPVMH 323
Query: 369 DSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQL 428
++ ++G+ + L +A + L+ + +Q L G+K L +L
Sbjct: 324 ---RLVRTLVGQMGAAYPELGRAQALIEETLLLEETRFKQT-------LDRGLKLLDDEL 373
Query: 429 ARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKAA 488
P + G+ AF LYDTYG ++ Q+ K + + F+ + E K +++A A
Sbjct: 374 TALPEEAPLPGEAAFKLYDTYGFPLDLTQDALREKGRKVDTDGFDAAMAEQKAKARAAWA 433
Query: 489 SNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKHA 547
+ D + F V D D+ YDT + + +V+
Sbjct: 434 GSGESTD--NAIWFDVLDVAGATDFLGYDTEKA-------EGQALALVV----------- 473
Query: 548 IRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIGE 607
GA D I + WV + ++T Y +GGQ+ D GV VE
Sbjct: 474 -----DGALSDRIAEGGSGWV--VTNQTPFYGESGGQVGDTGVIRRLENRDHVALVEDSR 526
Query: 608 LASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVLT-CT 666
+ +GK+ + + G +EVD R H+ +HLL+ ALR L
Sbjct: 527 KFA-DGKVYAHKVTMERGALAKGDAVELEVDHARRSAIRANHSATHLLHEALREALGDHV 585
Query: 667 YQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFLTH 726
Q+ +D DFS + + L+ +A V +N I +V+ R M + +
Sbjct: 586 AQRGSLNAADRLRFDFS-HAKALTEAELAQVGAEVNRFIRQNSRVETRIMTPDDARAIGA 644
Query: 727 LTVIPGEIYPDDVILIDISDKE-------NVISREPCCGTHVFNTGHIESCTVIGYKSYN 779
+ GE Y D+V ++ + E S E C GTHV TG I ++G + +
Sbjct: 645 QALF-GEKYGDEVRVVSMGRAETGKGADGKTWSIELCGGTHVAQTGDIGMFVLLGDSASS 703
Query: 780 HGVRSIKCLTGDSSKAAVENGKHLST-AASFSQI 812
GVR I+ LTG +AA + HLS A SQ+
Sbjct: 704 AGVRRIEALTG---QAAFD---HLSQEGARLSQV 731
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F NSGM QFKN F G+ Y R +QKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFTNSGMVQFKNCFTGVDKRDYVRATTAQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K +A A E +T+ +P DRLY T
Sbjct: 89 FFEMLGNFSFGDYFKSEAIPFAWELITR-DFDIPKDRLYTT 128
>gi|16126768|ref|NP_421332.1| alanyl-tRNA synthetase [Caulobacter crescentus CB15]
gi|221235548|ref|YP_002517985.1| alanyl-tRNA synthetase [Caulobacter crescentus NA1000]
gi|20532261|sp|Q9A5C1.1|SYA_CAUCR RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|13424088|gb|AAK24500.1| alanyl-tRNA synthetase [Caulobacter crescentus CB15]
gi|220964721|gb|ACL96077.1| alanyl-tRNA synthetase [Caulobacter crescentus NA1000]
Length = 880
Score = 332 bits (851), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 245/800 (30%), Positives = 378/800 (47%), Gaps = 117/800 (14%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS+FLDYF H + S+P+VP D ++ FVN+GM FKNVF G +PR A+SQ
Sbjct: 7 IRSTFLDYFGKAD-HAVTPSAPLVPQNDPTLLFVNAGMVPFKNVFTGAETPAHPRAASSQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K A A LT LP D+
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQAILHAWTLLT-AEFKLPKDK 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
L T + D+E D+W ++ G+ D I + NFW MG TGPCG SEI
Sbjct: 125 LLVTVY--------HTDDEAADLWKKIAGLGDDRIIRIPTSDNFWSMGDTGPCGPCSEIF 176
Query: 196 YD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
+D G P S + D + IEIWN+VF+ ++++ + L K IDTG+G E
Sbjct: 177 FDHGPHIAGGPPGSP----DEDGDRFIEIWNLVFMQFEQLAGGERISLPKPSIDTGMGLE 232
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
R+ +LQ + YD DLF L+ +++G K G S+R+++D+ R
Sbjct: 233 RIAAVLQGQHDNYDIDLFKALIAASVELTGVKAEGAQAP---------SHRVIADHLRSS 283
Query: 311 TVALADNMFPDATAK-------LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDV 363
+ LAD + P + +R +R A L+ L+ L+ + +G
Sbjct: 284 SFLLADGVSPSNEGRGYVLRRIMRRAMRHAYLLGASE------PLMHRLAPTLVREMGQA 337
Query: 364 YPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKY 423
YPE++ + E+ I + LR+ E E+F L G+
Sbjct: 338 YPELRRA----------EALIVETLRQ--------------EEERFRTT----LGRGMGL 369
Query: 424 LTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERS 483
L + A + + G+ AF LYDTYG ++ Q+ AK LT+ +AF+ + + +E +
Sbjct: 370 LDEATANLAAGGVLDGETAFKLYDTYGFPLDLTQDAVRAKGLTVDTDAFDAAMQKQREMA 429
Query: 484 KAKAASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVFC 542
+A A + F + + D+ Y+T T G+V +
Sbjct: 430 RANWAGS--GQQGAAAAWFSIKEKAGATDFVGYET-----------TETTGVV---KAIV 473
Query: 543 IDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGV--AYLTNTTQEN 600
+D + A +G +++ ++ D+T+ YA +GGQ D GV A+ + +
Sbjct: 474 VDGAEVESASAGQTVE-----------VLLDRTSFYAESGGQAGDTGVIEAHGRESRVLD 522
Query: 601 GKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRA-HTTSHLLNAAL 659
+ + GEL VH + S KV + + V+ D R R+ H+ +HL++AAL
Sbjct: 523 TQKQAGELH------VHRVELASDLKVGDQVVASVDAD---RRNTTRSNHSAAHLVHAAL 573
Query: 660 RRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRA 718
VL QK V + DFS +G L+ + + +E +N+VI V + + M A
Sbjct: 574 HHVLGPHVAQKGQMVDGERMRFDFS-HGGPLTAEELDRIEAEVNEVIRQNVPAETKEM-A 631
Query: 719 SELPFLTHLTVIPGEIYPDDVILI----DISDKENVISREPCCGTHVFNTGHIESCTVIG 774
+ + GE Y D V ++ ++D+ S E C GTHV TG I ++
Sbjct: 632 PQEAIEAGAVALFGEKYGDSVRVLTLGKSLADEAKAYSVELCGGTHVARTGDIALFKIVS 691
Query: 775 YKSYNHGVRSIKCLTGDSSK 794
+ GVR I+ LTG++++
Sbjct: 692 EQGVAAGVRRIEALTGEAAR 711
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ FVN+GM FKNVF G +PR A+SQKC+R GGKHNDL G + HHT
Sbjct: 29 VPQNDPTLLFVNAGMVPFKNVFTGAETPAHPRAASSQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K A A LT LP D+L T
Sbjct: 89 FFEMLGNFSFGDYFKEQAILHAWTLLT-AEFKLPKDKLLVT 128
>gi|375012511|ref|YP_004989499.1| alanine--tRNA ligase [Owenweeksia hongkongensis DSM 17368]
gi|359348435|gb|AEV32854.1| alanine--tRNA ligase [Owenweeksia hongkongensis DSM 17368]
Length = 873
Score = 332 bits (851), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 257/844 (30%), Positives = 395/844 (46%), Gaps = 128/844 (15%)
Query: 11 RLCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYP 70
+ ++ IR SFLD+F + H +V S+PIV GD ++ F N+GM QFK+ FLG
Sbjct: 6 KWTARKIRQSFLDFF-EARKHDIVPSAPIVLKGDPTLMFTNAGMNQFKDYFLGNDTPKNT 64
Query: 71 RVANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPV 130
RV ++QKC+RV GKHNDL G D+YHHT FEMLGNWSF DY+K +A A LT+
Sbjct: 65 RVTDTQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKTEAIEWAWTLLTE-VY 123
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWLELGVPRDHIKKEGMKCNFWEMGSTGPCGY 190
L DRLY T F G + L D+++ + W + D I K NFWEMG++GPCG
Sbjct: 124 GLDKDRLYVTVFEGDKEDELEKDQDSFNNWKKF-TAEDRILNGNKKDNFWEMGASGPCGP 182
Query: 191 SSEIHYDMKGEPSSAL--AR--VNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTG 246
SSEIH D++ + A AR VN D ++EIWN+VFI R + ++ L ++DTG
Sbjct: 183 SSEIHIDLRNDDERAKVDARTLVNMDHPQVVEIWNLVFIEFNRKADGSLEKLPAKHVDTG 242
Query: 247 LGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDY 306
+GFERL LQ K S YDTD+F PL+ IE +SG YG+ + + R+++D+
Sbjct: 243 MGFERLCMALQGKQSNYDTDVFTPLIAKIENLSGI-AYGKDEQQT------IAIRVIADH 295
Query: 307 SRMITVALADNMFPDATAKLRNVVRDALLISEDVFKVKQGKLVKELSYNIAEIL----GD 362
R + A+AD P T V +L + + + Y + EIL G+
Sbjct: 296 VRAVAFAIADGQLPSNTGA--GYVIRRILRRAIRYGFSYLNMKEAFIYQLVEILAEQMGE 353
Query: 363 VYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVK 422
+PEIQ ++ ++ EE F ++
Sbjct: 354 FFPEIQSQKQLVEKVIHEEENSF-----------------------------------LR 378
Query: 423 YLTKQLAR-DPSITEISGDM-----AFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKL 476
L + L+R D I E G M F LYDT+G ++ + + + + + ++ ++
Sbjct: 379 TLEQGLSRLDQIIAETDGKMVEGAKVFELYDTFGFPPDLTGLILSEQGYSYNQKGYDTEM 438
Query: 477 NELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLVGIVI 536
KER A++A + D + LK DD+ + YD S + V I
Sbjct: 439 TSQKER--ARSAGKLDTGDWVTLK-----DDEKEEFIGYDYTSAQ----------VSITR 481
Query: 537 GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNT 596
+V K + L+F T Y GGQ+ D G+ +
Sbjct: 482 YRKVVAKKKELYQ--------------------LVFSLTPFYPEGGGQVGDKGLLH---- 517
Query: 597 TQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSR--VEVDARMRLGCMRAHTTSHL 654
+N K+EI + G I+H K+ L ++ EV+ +R H+ +HL
Sbjct: 518 -NDNEKIEIIDTKKEHGVIIHIAE-----KLPENLDAKFQAEVNTELRTDASYNHSATHL 571
Query: 655 LNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDR 713
L+ ALR VL T QK V + DFS + + ++ + + +E +N+ + ++
Sbjct: 572 LHQALREVLGTHVEQKGSLVAPNHLRFDFSHFSK-VTDEEIQQIEDLVNNRVQKNFSLEE 630
Query: 714 -RHM---RASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIES 769
R++ +A E+ + ++ GE Y D V I + S E C G HV TG I
Sbjct: 631 FRNIPINKAQEMGAM----MLFGEKYGDTVRAIKFGE-----SIELCGGIHVGATGEIGL 681
Query: 770 CTVIGYKSYNHGVRSIKCLTGDSSKAAVENGKHLSTAASFSQIL-NVGNIPYGDDSIAFV 828
+ + G+R I+ LTG +++ V +H+ T + Q L NV ++ G +S+
Sbjct: 682 FKITHEGAVAAGIRRIEALTGATARKYV--NEHIETLNTIKQELKNVKDLIAGINSLKDE 739
Query: 829 NSGM 832
NS +
Sbjct: 740 NSKL 743
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 821 GDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHTFFE 880
GD ++ F N+GM QFK+ FLG RV ++QKC+RV GKHNDL G D+YHHT FE
Sbjct: 37 GDPTLMFTNAGMNQFKDYFLGNDTPKNTRVTDTQKCLRVSGKHNDLEEVGHDTYHHTMFE 96
Query: 881 MLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
MLGNWSF DY+K +A A LT+ L DRLY T
Sbjct: 97 MLGNWSFGDYFKTEAIEWAWTLLTE-VYGLDKDRLYVT 133
>gi|15803211|ref|NP_289243.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
gi|12517136|gb|AAG57801.1|AE005498_2 alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
Length = 878
Score = 332 bits (851), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 257/812 (31%), Positives = 383/812 (47%), Gaps = 137/812 (16%)
Query: 14 SKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVA 73
+ IR +FLD+F +++GH +V SS +VP+ D ++ F N+GM QFK+VFLGL Y R
Sbjct: 5 TAEIRQAFLDFF-HSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRAT 63
Query: 74 NSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSL 132
SQ+CVR GGKHNDL G + HHTFFEMLGN+SF DY+K DA + A E LT +L
Sbjct: 64 TSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFAL 123
Query: 133 PLDRLYFTYFGGSDQYGLPCDEETRDIW-LELGVPRDHIKKEG-------MKCNFWEMGS 184
P +RL+ T + D+E +IW E+G+PR+ I + G NFW+MG
Sbjct: 124 PKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGD 175
Query: 185 TGPCGYSSEIHYD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLS 239
TGPCG +EI YD G P S D + IEIWNIVF+ R + T+ PL
Sbjct: 176 TGPCGPCTEIFYDHGDHIWGGPPGSP----EEDGDRYIEIWNIVFMQFNRQADGTMEPLP 231
Query: 240 KNYIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDL-DT 298
K +DTG+G ER+ +LQ+ S YD DLF L++ + KV+GA TDL +
Sbjct: 232 KPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGA------------TDLSNK 279
Query: 299 SYRMLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLV---KEL 352
S R+++D+ R +AD + P + LR ++R A V+ G ++ +
Sbjct: 280 SLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRA---------VRHGNMLGAKETF 330
Query: 353 SYNIAEILGDVYPEIQDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIM 412
Y + L DV + + + Q + + ++KT E EQF
Sbjct: 331 FYKLVGPLIDVMGSAGEDLKRQQ------------------AQVEQVLKT--EEEQFART 370
Query: 413 EEPGLVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAF 472
E GL L L ++LA+ T + G+ AF LYDTYG ++ ++ + + + F
Sbjct: 371 LERGLAL----LDEELAKLSGDT-LDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGF 425
Query: 473 EQKLNELKERSKAKAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
E + E +R +A+ AS Y D+ S+ + L+ N
Sbjct: 426 EAAMEE--QRRRAREASGFG--------------ADYNAMIRVDSASEFKGYDHLELN-- 467
Query: 533 GIVIGDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIG--- 589
G V +D G ++D+I A V + D+T YA +GGQ+ D G
Sbjct: 468 GKVT---ALFVD---------GKAVDAINAGQEAVV--VLDQTPFYAESGGQVGDKGELK 513
Query: 590 ---VAYLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCM 646
+++ TQ+ G+ IG + L + G+ V + +VD R
Sbjct: 514 GANFSFVVEDTQKYGQA-IGHIGKLAAGSLKVGDAVQA-----------DVDEARRARIR 561
Query: 647 RAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI 705
H+ +HL++AALR+VL T QK V DFS + E + + + AVE +N I
Sbjct: 562 LNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS-HNEAMKPEEIRAVEDLVNAQI 620
Query: 706 ANQVQVDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTG 765
+ ++ M E + GE Y + V ++ + D S E C GTH TG
Sbjct: 621 RRNLPIETNIMDL-EAAKAKGAMALFGEKYDERVRVLSMGD----FSTELCGGTHASRTG 675
Query: 766 HIESCTVIGYKSYNHGVRSIKCLTGDSSKAAV 797
I +I GVR I+ +TG+ + V
Sbjct: 676 DIGLFRIISESGTAAGVRRIEAVTGEGAITTV 707
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLGL Y R SQ+C+R GGKHNDL G + HHT
Sbjct: 30 VPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHT 89
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEMLGN+SF DY+K DA + A E LT +LP +RL+ T
Sbjct: 90 FFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVT 131
>gi|59801613|ref|YP_208325.1| alanyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
gi|75432448|sp|Q5F7C4.1|SYA_NEIG1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|59718508|gb|AAW89913.1| putative alanyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
Length = 874
Score = 332 bits (851), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 246/800 (30%), Positives = 390/800 (48%), Gaps = 123/800 (15%)
Query: 12 LCSKSIRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPR 71
+ + +R FL +F T+GHT+V+SS +VP+ D ++ F N+GM QFK+VFLG PY R
Sbjct: 1 MKTSELRQKFLKFF-ETKGHTVVRSSSLVPHDDPTLLFTNAGMNQFKDVFLGFDKRPYSR 59
Query: 72 VANSQKCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPP-V 130
+QKCVR GGKHNDL G + HHTFFEM+GN+SF DY+KRDA A EFLT P +
Sbjct: 60 ATTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKRDAIHFAWEFLTSPEWL 119
Query: 131 SLPLDRLYFTYFGGSDQYGLPCDEETRDIWL-ELGVPRDHIKKEG-------MKCNFWEM 182
++P D+L T + D+E +IWL E+G+P + I + G NFW+M
Sbjct: 120 NIPKDKLLATVY--------AEDDEAYNIWLNEIGMPSERIVRIGDNKGAKYASDNFWQM 171
Query: 183 GSTGPCGYSSEIHYDMKGEPSSAL-ARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKN 241
G TGPCG SEI YD E + D + IEIWN VF+ R + PL K
Sbjct: 172 GDTGPCGPCSEIFYDHGKEIWGGIPGSPEEDGDRWIEIWNCVFMQFNRDEQGNMNPLPKP 231
Query: 242 YIDTGLGFERLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYR 301
+DTG+G ER+ ++Q+ S Y+ DLF LL+ + + +GA P+ + S +
Sbjct: 232 SVDTGMGLERMAAVMQHVHSNYEIDLFQDLLKAVARETGA-PFSME---------EPSLK 281
Query: 302 MLSDYSRMITVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGK-LVKELSYNIA 357
+++D+ R + +AD + P + LR ++R A+ +K+ Q K +L ++
Sbjct: 282 VIADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRAV---RHGYKLGQSKPFFHKLVADLV 338
Query: 358 EILGDVYPEIQDSINKIQLIL-GEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPG 416
+ +G YPE+++ +I+ L EESR L E G
Sbjct: 339 QEMGGAYPELKEKQAQIEEALKNEESRFAQTL-------------------------ETG 373
Query: 417 LVLGVKYLTKQLARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKL 476
+ L L LA+ + G++ F LYDTYG ++ ++ + + FE+++
Sbjct: 374 MAL----LENALAKGGKT--LGGEIIFKLYDTYGFPYDLTADICRERNIEPDEAGFEREM 427
Query: 477 NELKERSKA----KAASNVPDIDLMDLKHFPVTDDKYKYDYHYDTNSKRYTFPCLDTNLV 532
+ R++A KA + +P YD DT K Y+ ++ ++
Sbjct: 428 EAQRARARAAQSFKANAQLP------------------YDGQ-DTEFKGYSERQTESKVL 468
Query: 533 GIVI-GDQVFCIDKHAIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVA 591
+ G+QV +++ SGA ++ D T YA +GGQ+ D+G
Sbjct: 469 ALYKDGEQVVELNE-----GDSGA--------------VVIDFTPFYAESGGQVGDVGYI 509
Query: 592 YLTNTTQENGKVEIGELASLEGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTT 651
+ EN + E+ + ++ + V +S ++ G + +VD +R MR H+
Sbjct: 510 F----AGEN-RFEVRDTQKIKAAVFGQFGVQTSGRLKVGDSITAKVDDEIRNANMRNHSA 564
Query: 652 SHLLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQ 710
+HL++ ALR VL QK V ++ D S + + ++ + +A VE+ +N+ I V
Sbjct: 565 THLMHKALRDVLGGHVEQKGSLVTAESTRFDIS-HPQAVTAEEIAEVERRVNEAILANVA 623
Query: 711 VDRRHMRASELPFLTHLTVIPGEIYPDDVILIDISDKENVISREPCCGTHVFNTGHIESC 770
V+ M + E T ++ GE Y D+V ++ + S E C GTHV TG I
Sbjct: 624 VNAAIM-SMEDAQKTDAMMLFGEKYGDEVRVLQMGG----FSTELCGGTHVSRTGDIGLF 678
Query: 771 TVIGYKSYNHGVRSIKCLTG 790
+I GVR I+ +TG
Sbjct: 679 KIISEGGIAAGVRRIEAITG 698
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P+ D ++ F N+GM QFK+VFLG PY R +QKC+R GGKHNDL G + HHT
Sbjct: 28 VPHDDPTLLFTNAGMNQFKDVFLGFDKRPYSRATTAQKCVRAGGKHNDLENVGYTARHHT 87
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPP-VSLPLDRLYFT 918
FFEM+GN+SF DY+KRDA A EFLT P +++P D+L T
Sbjct: 88 FFEMMGNFSFGDYFKRDAIHFAWEFLTSPEWLNIPKDKLLAT 129
>gi|378826123|ref|YP_005188855.1| hypothetical protein SFHH103_01533 [Sinorhizobium fredii HH103]
gi|365179175|emb|CCE96030.1| alas3 [Sinorhizobium fredii HH103]
Length = 887
Score = 332 bits (851), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 252/797 (31%), Positives = 365/797 (45%), Gaps = 106/797 (13%)
Query: 17 IRSSFLDYFCNTQGHTLVKSSPIVPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQ 76
IRS FLDYF GH +V SSP+VP D ++ F N+GM QFKNVF GL PY A +Q
Sbjct: 7 IRSMFLDYF-RKNGHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEQRPYSTAATAQ 65
Query: 77 KCVRVGGKHNDLSCAGRDSYHHTFFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDR 136
KCVR GGKHNDL G + HHTFFEMLGN+SF DY+K A +A +TK L R
Sbjct: 66 KCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKERAIELAWNLITKE-YGLDAKR 124
Query: 137 LYFTYFGGSDQYGLPCDEETRDIWLEL-GVPRDHIKKEGMKCNFWEMGSTGPCGYSSEIH 195
L T + D+E +W ++ G D I + NFW MG TGPCG SEI
Sbjct: 125 LLVTVY--------HTDDEAFGLWKKIAGFSDDRIIRIPTSDNFWAMGDTGPCGPCSEIF 176
Query: 196 YD-----MKGEPSSALARVNADRNDLIEIWNIVFISHKRVSADTIVPLSKNYIDTGLGFE 250
YD G P SA D + IEIWN+VF+ +++++ + V L + IDTG+G E
Sbjct: 177 YDHGEQIWGGPPGSA----EEDGDRFIEIWNLVFMQYEQITKEERVNLPRPSIDTGMGLE 232
Query: 251 RLVTILQNKTSTYDTDLFLPLLETIEKVSGAKPYGRTFTTSNRTDLDTSYRMLSDYSRMI 310
RL +LQ + YD DLF L+ E+ +G K G D S+R+++D+ R
Sbjct: 233 RLAAVLQGQHDNYDIDLFRALIAASEEATGVKAEG---------DRRASHRVIADHLRSS 283
Query: 311 TVALADNMFPDATAK---LRNVVRDALLISEDVFKVKQGKLVKELSYNIAEILGDVYPEI 367
+AD + P + LR ++R A+ A++LG P +
Sbjct: 284 AFLIADGVLPSNEGRGYVLRRIMRRAM--------------------RHAQLLGAQEPLM 323
Query: 368 QDSINKIQLILGEESRIFDNLRKAAVKEWKPLVKTQPELEQFNIMEEPGLVLGVKYLTKQ 427
+ ++G+ R + L +A + L+ +LE+ + L G+ L
Sbjct: 324 W---KLLPALVGQMGRAYPELVRA-----EALISETLKLEETRFRKT--LERGLSLLGDA 373
Query: 428 LARDPSITEISGDMAFTLYDTYGLSKNIIQELAAAKKLTLCHEAFEQKLNELKERSKAKA 487
A + G+ AF LYDTYG ++ Q+ AK +T+ +AF + K ++A
Sbjct: 374 SAGLSEGDQFDGETAFKLYDTYGFPLDLTQDALRAKGITVDTDAFSVAMQRQKAEARANW 433
Query: 488 ASNVPDIDLMDLKHFPVTDDKYKYDY-HYDTNSKRYTFPCLDTNLVGIVIGDQVFCIDKH 546
A + + F + + D+ YDT S G+V Q D
Sbjct: 434 AGSGEAA--TETIWFELKEKHGATDFLGYDTESAE-----------GVV---QAIVRDGT 477
Query: 547 AIRHARSGASIDSIQLEHNAWVGLIFDKTNLYATAGGQIDDIGVAYLTNTTQENGKVEIG 606
+ A G + LI ++T Y +GGQI D GV E GK+ +
Sbjct: 478 VVESASKGEGVQ-----------LILNQTPFYGESGGQIGDTGV-----IATETGKLAVT 521
Query: 607 ELASL-EGKIVHFGNVVSSFKVTPGLTSRVEVDARMRLGCMRAHTTSHLLNAALRRVL-T 664
+ EG VH+G V V G + + VD R H+ +HLL+ ALR VL T
Sbjct: 522 DTQKRGEGLFVHYGTVTEGI-VKTGEAAALTVDHARRSRLRANHSATHLLHEALREVLGT 580
Query: 665 CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIANQVQVDRRHMRASELPFL 724
QK V + D S + + ++ + + VE+ N+VI V R M +
Sbjct: 581 HVAQKGSLVAPERLRFDVS-HPKPMTAEELREVEEMANEVIVQNTPVTTRLMSVDD-AIA 638
Query: 725 THLTVIPGEIYPDDVILIDI------SDKENVISREPCCGTHVFNTGHIESCTVIGYKSY 778
+ GE Y D+V ++ + S S E C GTHV TG I V+ +
Sbjct: 639 EGAMALFGEKYGDEVRVVAMGQGVRGSKAGRPYSVELCGGTHVSATGDIGLVRVVSESAV 698
Query: 779 NHGVRSIKCLTGDSSKA 795
GVR ++ LTG++++A
Sbjct: 699 GAGVRRLEALTGEAARA 715
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 818 IPYGDDSIAFVNSGMCQFKNVFLGLTPAPYPRVANSQKCIRVGGKHNDLSFAGRDSYHHT 877
+P D ++ F N+GM QFKNVF GL PY A +QKC+R GGKHNDL G + HHT
Sbjct: 29 VPRNDPTLMFTNAGMVQFKNVFTGLEQRPYSTAATAQKCVRAGGKHNDLDNVGYTARHHT 88
Query: 878 FFEMLGNWSFNDYYKRDACRMALEFLTKPPVSLPLDRLYFT 918
FFEMLGN+SF DY+K A +A +TK L RL T
Sbjct: 89 FFEMLGNFSFGDYFKERAIELAWNLITK-EYGLDAKRLLVT 128
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,763,680,255
Number of Sequences: 23463169
Number of extensions: 639917936
Number of successful extensions: 1427875
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6129
Number of HSP's successfully gapped in prelim test: 1335
Number of HSP's that attempted gapping in prelim test: 1370345
Number of HSP's gapped (non-prelim): 20017
length of query: 925
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 773
effective length of database: 8,792,793,679
effective search space: 6796829513867
effective search space used: 6796829513867
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)