BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6340
(158 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6LMH9|SYA_THEM4 Alanine--tRNA ligase OS=Thermosipho melanesiensis (strain BI429 /
DSM 12029) GN=alaS PE=3 SV=1
Length = 859
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 54/158 (34%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 2 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 60
R R HT +HLL+AALR+VL T Q V + DF+ Y L+ + + +EK
Sbjct: 546 RKATARNHTATHLLHAALRKVLGTHVRQAGSLVAPERLRFDFTHYA-ALTKEEIEKIEKM 604
Query: 61 INDVIADQVQVDRRHMRASEI------------YPDDVILIDISDKENVISREPCCGTHV 108
+N+ I + + V+ + M E Y D V ++ I D S E C GTHV
Sbjct: 605 VNEKILEAIDVNTKVMSYDEAIKNGAMALFEEKYGDKVRVVRIRD----FSEELCGGTHV 660
Query: 109 FNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVEN 146
NTG I +I S + GVR I+ +TG +S +EN
Sbjct: 661 KNTGEIGLFKIISESSVSAGVRRIEAITGFASLTYLEN 698
>sp|A5IMH8|SYA_THEP1 Alanine--tRNA ligase OS=Thermotoga petrophila (strain RKU-1 / ATCC
BAA-488 / DSM 13995) GN=alaS PE=3 SV=1
Length = 863
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 2 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 60
R MR HT +HLL+AAL++VL Q V D DF+ + + LS+ + VE
Sbjct: 554 REATMRNHTATHLLHAALKKVLGDHVRQAGSLVAPDRLRFDFTHF-KGLSMAEIEQVENL 612
Query: 61 INDVIADQVQVDRRHMRASEIYPDDVILIDISDK---------ENVISREPCCGTHVFNT 111
+N+ I + + V+ R+ E V+ + ++K +S+E C GTHV NT
Sbjct: 613 VNEWIMEAIPVEVRYTSYEEAVKSGVVAL-FTEKYGDVVRVVEVPGVSKELCGGTHVSNT 671
Query: 112 GHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAAVKQ 156
G I +I +S + GVR I+ +TG S+ + N K+L +K+
Sbjct: 672 GQIGLFKIISEESVSSGVRRIEAVTGFSTLELLRNQKKLIDQLKE 716
>sp|A4XKP4|SYA_CALS8 Alanine--tRNA ligase OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=alaS PE=3 SV=1
Length = 881
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/150 (34%), Positives = 76/150 (50%), Gaps = 18/150 (12%)
Query: 1 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 59
+RL M+ HT +HLL+++LRR+L Q V + DF+ + E LS + + +EK
Sbjct: 556 LRLATMKNHTATHLLHSSLRRILGEHATQSGSLVEPERLRFDFAHF-EPLSEEQIVEIEK 614
Query: 60 YINDVIADQVQVDRRH--------MRAS----EIYPDDVILIDISDKENVISREPCCGTH 107
+ND+I + V++ M A+ E Y + V +I I D S E C GTH
Sbjct: 615 MVNDIIQQAIPVEKIQTDLDSAIKMGATALFDEKYSNIVRVIKIGD----FSMELCGGTH 670
Query: 108 VFNTGHIESCTVIGYKSYNHGVRSIKCLTG 137
V NTG I +I S GVR I+ +TG
Sbjct: 671 VDNTGQIGMFKIISESSVAAGVRRIEAITG 700
>sp|Q9X1B6|SYA_THEMA Alanine--tRNA ligase OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=alaS PE=3 SV=1
Length = 863
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 2 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 60
R MR HT +HLL+AAL++VL Q V D DF+ + + LS + VE
Sbjct: 554 REATMRNHTATHLLHAALKKVLGDHVRQAGSLVAPDRLRFDFTHF-KGLSSAEIEQVEDL 612
Query: 61 INDVIADQVQVDRRHMRASEIYPDDVILIDISDK---------ENVISREPCCGTHVFNT 111
+N+ I + + V+ R+ E V+ + ++K +S+E C GTHV NT
Sbjct: 613 VNEWIMEAIPVEVRYTSYEEAVKSGVVAL-FTEKYGDVVRVVEVPGVSKELCGGTHVKNT 671
Query: 112 GHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAAVKQ 156
G I +I +S + GVR I+ +TG S+ + N K+L +K+
Sbjct: 672 GQIGLFKIISEESVSSGVRRIEAVTGFSALELLRNQKKLIDQLKE 716
>sp|D3ZX08|SYAM_RAT Alanine--tRNA ligase, mitochondrial OS=Rattus norvegicus GN=Aars2
PE=2 SV=1
Length = 985
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 25/178 (14%)
Query: 2 RLGCMRAHTTSHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGET-LSVDSVAAVEKY 60
R+GCM HT +HLLN ALR+ L T ++ + E L F V +T L+ + + VE Y
Sbjct: 625 RMGCMVKHTATHLLNWALRQTLGPTTEQRGSHLNPE-RLRFDVATQTPLTTEQLRTVESY 683
Query: 61 INDVIADQV-----QVDRRH------MRA-SEIYPDDVI-----------LIDISDKENV 97
+ + + +V H +R+ E+YPD V L S
Sbjct: 684 VQEAVGQDKPVYMEEVPLAHTARIPGLRSLDEVYPDPVRVVSVGVPVAQALAPASQAALQ 743
Query: 98 ISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAAVK 155
S E CCGTH+ +TG + +IG + G+ + +TGE ++ A E G+ LS V+
Sbjct: 744 TSVELCCGTHLLSTGAVGDLVIIGDRQLVKGITRLLAITGEQAQQAREVGQSLSQEVE 801
>sp|Q0AQY6|SYA_MARMM Alanine--tRNA ligase OS=Maricaulis maris (strain MCS10) GN=alaS
PE=3 SV=1
Length = 884
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 53/158 (33%), Positives = 76/158 (48%), Gaps = 19/158 (12%)
Query: 2 RLGCMRA-HTTSHLLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 59
R +RA H+ +HL +AALR VL QK V D DFS + +++S D +AA+E
Sbjct: 557 RRAAIRANHSATHLAHAALRDVLGAHVTQKGSHVGPDRLRFDFS-HNKSVSADQIAAIEA 615
Query: 60 YINDVIADQVQVDRRHMRAS------------EIYPDDVILI----DISDKENVISREPC 103
+N VI V V R M E Y D V ++ ++D S E C
Sbjct: 616 QVNAVIRQNVPVSTREMTPDAAIEAGALALFGEKYGDTVRVLAMGQGLADHATPYSVELC 675
Query: 104 CGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSK 141
GTHV TG I +I + + G+R I+ +TGE ++
Sbjct: 676 GGTHVERTGDIALFKIIAETAVSSGIRRIEAMTGEGAR 713
>sp|B1LBS9|SYA_THESQ Alanine--tRNA ligase OS=Thermotoga sp. (strain RQ2) GN=alaS PE=3
SV=1
Length = 863
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 2 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 60
R MR HT +HLL+AAL++VL Q V D DF+ + + LS + VE
Sbjct: 554 RESTMRNHTATHLLHAALKKVLGDHVRQAGSLVAPDRLRFDFTHF-KGLSSAEIEQVEDL 612
Query: 61 INDVIADQVQVDRRHMRASEIYPDDVILIDISDK---------ENVISREPCCGTHVFNT 111
+N+ I + + V+ R+ E V+ + ++K +S+E C GTHV NT
Sbjct: 613 VNEWIMEAIPVEVRYTSYEEAVKSGVVAL-FTEKYGDVVRVVEVPGVSKELCGGTHVKNT 671
Query: 112 GHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAAVKQ 156
G I +I +S + GVR I+ +TG S+ + N K+L +K+
Sbjct: 672 GQIGLFKIISEESVSSGVRRIEAVTGFSALELLRNQKKLIDQLKE 716
>sp|Q14CH7|SYAM_MOUSE Alanine--tRNA ligase, mitochondrial OS=Mus musculus GN=Aars2 PE=2
SV=1
Length = 980
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 25/178 (14%)
Query: 2 RLGCMRAHTTSHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETL-SVDSVAAVEKY 60
R+GCM HT +HLL+ ALR+ L T ++ + E L F V +TL + + + VE Y
Sbjct: 620 RMGCMVKHTATHLLSWALRQTLGPTTEQRGSHLNPE-RLRFDVATQTLLTTEQLRTVESY 678
Query: 61 INDVIADQV-----QVDRRH------MRA-SEIYPDDV-----------ILIDISDKENV 97
+ +V+ +V H +R+ E+YPD V L S
Sbjct: 679 VQEVVGQDKPVFMEEVPLAHTARIPGLRSLDEVYPDPVRVVSVGVPVAHALGPASQAAMH 738
Query: 98 ISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAAVK 155
S E CCGTH+ +TG + +IG + G+ + +TGE ++ A E G+ LS V+
Sbjct: 739 TSVELCCGTHLLSTGAVGDLVIIGERQLVKGITRLLAITGEQAQQAREVGQSLSQEVE 796
>sp|Q4FMX6|SYA_PELUB Alanine--tRNA ligase OS=Pelagibacter ubique (strain HTCC1062)
GN=alaS PE=3 SV=1
Length = 889
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 15/141 (10%)
Query: 9 HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAD 67
H+ +HLL+ ALRRVL QK V SD DFS + + +S + + +E Y+N +I
Sbjct: 564 HSATHLLHEALRRVLGEHVTQKGSLVQSDRLRFDFS-HMKPISDEEIRKIEHYVNSIIEK 622
Query: 68 QVQVDRRHMRASEI------------YPDDVILIDISDKE-NVISREPCCGTHVFNTGHI 114
+ +V R M E Y D+V ++ + D+E S E C GTHV NT I
Sbjct: 623 KSEVKTRIMTPKEAVENGALALFGEKYGDEVRVLSMGDEEGKFFSTELCGGTHVVNTADI 682
Query: 115 ESCTVIGYKSYNHGVRSIKCL 135
+I S GVR ++ L
Sbjct: 683 GKFKIISQSSIAAGVRRVEAL 703
>sp|Q7NXM2|SYA_CHRVO Alanine--tRNA ligase OS=Chromobacterium violaceum (strain ATCC
12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 /
NCTC 9757) GN=alaS PE=3 SV=1
Length = 877
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 2 RLGCMRAHTTSHLLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 60
R R H+ +HLL+AALR VL QK V + DF+ +GE ++ +A +E+
Sbjct: 558 RQASARNHSATHLLHAALRHVLGGHVVQKGSLVNPERTRFDFA-HGEAVTAAQIAELERV 616
Query: 61 INDVIAD--QVQVDRRHMRAS----------EIYPDDVILIDISDKENVISREPCCGTHV 108
+N VIA +V+ + M A+ E Y D+V ++ + D S E C GTHV
Sbjct: 617 VNHVIAANYEVKAELMSMEAAQKSGAMMLFGEKYGDEVRVLTMGD----FSAELCGGTHV 672
Query: 109 FNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENG----KQLSAAVK 155
TG I ++ GVR I+ +TGE + A ++ K+ +AA+K
Sbjct: 673 KRTGDIGLFKIVAEGGVAAGVRRIEAVTGEGALAYIQAQDALIKEAAAALK 723
>sp|Q2ITM9|SYA_RHOP2 Alanine--tRNA ligase OS=Rhodopseudomonas palustris (strain HaA2)
GN=alaS PE=3 SV=1
Length = 891
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 2 RLGCMRA-HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 59
R +RA H+ +HLL+ ALR+VL QK V D DF V+ + ++ D + VE
Sbjct: 556 RRSSIRANHSATHLLHEALRQVLGDHIAQKGSMVAPDRLRFDF-VHQKPITPDELRRVED 614
Query: 60 YINDVIADQVQVDRRHM----------RA--SEIYPDDVILIDISDK-----ENVI--SR 100
ND++ + +V R M RA E Y D+V ++ + N + S
Sbjct: 615 IANDIVLENDEVTTRLMAVDDAREAGARALFGEKYGDEVRVVSMGKTARDSGSNALGWSV 674
Query: 101 EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG----ESSKAAVENGKQLSAAVKQ 156
E C GTHV TG I ++ G + GVR I+ LTG +S+ AA+ KQ +A ++
Sbjct: 675 ELCGGTHVKRTGDIGLVSITGESAVASGVRRIEALTGRYARQSANAAINTAKQAAAELRT 734
Query: 157 T 157
T
Sbjct: 735 T 735
>sp|A1VEQ6|SYA_DESVV Alanine--tRNA ligase OS=Desulfovibrio vulgaris subsp. vulgaris
(strain DP4) GN=alaS PE=3 SV=1
Length = 879
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 22/171 (12%)
Query: 2 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 60
R+ R HT +HLL+AALRRVL Q V D DF+ + ++ + +AAVE+
Sbjct: 563 RVASARNHTCTHLLHAALRRVLGDHVKQAGSLVAPDRLRFDFT-HIAPMTPEELAAVERE 621
Query: 61 INDVIADQVQVDRRHMRAS------------EIYPDDVILIDISDKENVISREPCCGTHV 108
+N VI + ++ HM E Y D+V ++ I+D+ S E C GTH+
Sbjct: 622 VNRVIMADIPLETDHMHYDDAVKRGAMALFGEKYGDEVRVVAIADE----SVELCGGTHL 677
Query: 109 FNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAV----ENGKQLSAAVK 155
TG ++ GVR I+ LTG ++ AV QLSA +K
Sbjct: 678 RATGQAGLFLIVSESGVAAGVRRIEALTGWNAMHAVLAQRSEQAQLSAMLK 728
>sp|P61700|SYA_DESVH Alanine--tRNA ligase OS=Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB 8303) GN=alaS PE=3
SV=1
Length = 879
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 22/171 (12%)
Query: 2 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 60
R+ R HT +HLL+AALRRVL Q V D DF+ + ++ + +AAVE+
Sbjct: 563 RVASARNHTCTHLLHAALRRVLGDHVKQAGSLVAPDRLRFDFT-HIAPMTPEELAAVERE 621
Query: 61 INDVIADQVQVDRRHMRAS------------EIYPDDVILIDISDKENVISREPCCGTHV 108
+N VI + ++ HM E Y D+V ++ I+D+ S E C GTH+
Sbjct: 622 VNRVIMADIPLETDHMHYDDAVKRGAMALFGEKYGDEVRVVAIADE----SVELCGGTHL 677
Query: 109 FNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAV----ENGKQLSAAVK 155
TG ++ GVR I+ LTG ++ AV QLSA +K
Sbjct: 678 RATGQAGLFLIVSESGVAAGVRRIEALTGWNAMHAVLAQRSEQAQLSAMLK 728
>sp|Q5JTZ9|SYAM_HUMAN Alanine--tRNA ligase, mitochondrial OS=Homo sapiens GN=AARS2 PE=1
SV=1
Length = 985
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 25/178 (14%)
Query: 2 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 60
RLGCM HT +HLLN ALR+ L T Q+ + ++ LD + L+ + + AVE
Sbjct: 625 RLGCMAKHTATHLLNWALRQTLGPGTEQQGSHLNPEQLRLDVTTQ-TPLTPEQLRAVENT 683
Query: 61 INDVIADQVQVDRRH-----------MRA-SEIYPDDV-----------ILIDISDKENV 97
+ + + V +R+ E+YPD V L S
Sbjct: 684 VQEAVGQDEAVYMEEVPLALTAQVPGLRSLDEVYPDPVRVVSVGVPVAHALDPASQAALQ 743
Query: 98 ISREPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAAVK 155
S E CCGTH+ TG + +IG + + G + +TGE ++ A E G+ L+ VK
Sbjct: 744 TSVELCCGTHLLRTGAVGDLVIIGDRQLSKGTTRLLAVTGEQAQQARELGQSLAQEVK 801
>sp|Q9RS27|SYA_DEIRA Alanine--tRNA ligase OS=Deinococcus radiodurans (strain ATCC 13939
/ DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB
9279 / R1 / VKM B-1422) GN=alaS PE=3 SV=1
Length = 890
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 21/172 (12%)
Query: 2 RLGCMRAHTTSHLLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 60
R R HT +HLL+AALR VL QK RV +D+ DFS +G +S + +A VE
Sbjct: 571 RAAIQRHHTATHLLHAALRAVLGGGVQQKGSRVAADQLRFDFS-HGAAMSAEEIAQVETL 629
Query: 61 INDVIADQVQVDRRHMRA------------SEIYPDDVILIDISDKEN-----VISREPC 103
++ ++ V R M E Y D V ++ + + V S E C
Sbjct: 630 VSRWVSANFPVSWREMPIAEAKAAGATALFGEKYGDVVRVVRVEGDVDFGGHAVSSMELC 689
Query: 104 CGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAAVK 155
G HV TG I + ++ ++ GVR I+ L GE + A + +L+A+ K
Sbjct: 690 GGAHVSRTGDIGAFVIVSDENVAAGVRRIEALAGEQATAWLRG--RLNASAK 739
>sp|A9C0B9|SYA_DELAS Alanine--tRNA ligase OS=Delftia acidovorans (strain DSM 14801 /
SPH-1) GN=alaS PE=3 SV=1
Length = 874
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 22/169 (13%)
Query: 1 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 59
+R MR H+ +H+++ ALR VL QK V ++ DF+ + + ++ + + +E+
Sbjct: 556 LRAATMRNHSVTHIMHKALREVLGDHVQQKGSLVNAERTRFDFA-HNQPVTAEEIREIER 614
Query: 60 YINDVIADQVQVDRRHM-----RAS-------EIYPDDVILIDISDKENVISREPCCGTH 107
+N I D R M +A+ E Y D V ++DI SRE C GTH
Sbjct: 615 RVNAEILANTPTDARVMDIESAKATGAMMLFGEKYGDSVRVLDIGS-----SRELCGGTH 669
Query: 108 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAAVKQ 156
V TG I V+G GVR I+ +TGE++ A +++ L + V Q
Sbjct: 670 VQRTGDIGLFKVVGEGGVAAGVRRIEAVTGENALAYLQS---LESTVDQ 715
>sp|Q47AU8|SYA_DECAR Alanine--tRNA ligase OS=Dechloromonas aromatica (strain RCB)
GN=alaS PE=3 SV=1
Length = 871
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 6 MRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDV 64
MR H+ +HLL+ ALR VL QK +V D+ DF V+ + ++ + + VE +N
Sbjct: 558 MRNHSATHLLHKALREVLGDHVQQKGSQVDPDKTRFDF-VHNQPMTDEEIRRVENIVNAE 616
Query: 65 IADQVQVDRR------------HMRASEIYPDDVILIDISDKENVISREPCCGTHVFNTG 112
I V + R M E Y DDV ++DI SRE C GTHV TG
Sbjct: 617 ILANVATETRVLPIAEAQKLGAMMLFGEKYGDDVRVLDIGS-----SRELCGGTHVSRTG 671
Query: 113 HIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAAVKQT 157
I ++ GVR ++ +TG+++ A +++ + V T
Sbjct: 672 DIGLFSITAEGGVAAGVRRVEAVTGDNALAYMQDMESALGGVAGT 716
>sp|Q0A8K7|SYA_ALHEH Alanine--tRNA ligase OS=Alkalilimnicola ehrlichei (strain MLHE-1)
GN=alaS PE=3 SV=1
Length = 869
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 53/162 (32%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 9 HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAD 67
H+ +HLL+AALR VL T QK V D DF+ Y E S + + +E+ +ND I
Sbjct: 556 HSATHLLHAALRGVLGTHVQQKGSLVAPDRLRFDFAHY-EAPSTEQLEQIERIVNDEIRA 614
Query: 68 QVQVDRRHMRAS------------EIYPDDVILIDISDKENVISREPCCGTHVFNTGHIE 115
D HM E Y D V ++ + S E C GTHV TG I
Sbjct: 615 NRAADIEHMAYDDAIETGAMALFGEKYGDQVRVLRFGE----FSIELCGGTHVERTGDIG 670
Query: 116 SCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAAVKQT 157
C +I GVR I+ +TG+ + V+ +Q V +T
Sbjct: 671 LCKLISEGGVAGGVRRIEAVTGDRAVMWVQRTEQRLVQVAET 712
>sp|Q9VRJ1|SYAM_DROME Alanine--tRNA ligase, mitochondrial OS=Drosophila melanogaster
GN=Aats-ala-m PE=2 SV=1
Length = 1012
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 9 HTTSHLLNAALRRVLT-CTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAD 67
HT +HLLNAA+R + TYQ S V SD+C L+ + G+ + V +E IN VI
Sbjct: 656 HTATHLLNAAIRSLFKKVTYQVSSSVSSDQCKLELGLLGKRIQKTDVQLIEDLINRVICS 715
Query: 68 QVQVDRRHMRAS-------------EIYPDDVI-LIDISDKE-NVISREPCCGTHVFNTG 112
V+ + + A+ E+YP+ + L+++ E + S+E CCGTH NT
Sbjct: 716 AAPVEVQLLSAAEVLEQNDITMVPGEVYPEQGLRLVNVESPELQLSSKELCCGTHATNTS 775
Query: 113 HIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQL 150
+ ++ K N + + G++++ ++ L
Sbjct: 776 ELSCFCIVNLKQTNRARFAFTAVAGQAAENVLKTAALL 813
>sp|O01541|SYAC_CAEEL Alanine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans
GN=aars-2 PE=2 SV=1
Length = 968
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 26/176 (14%)
Query: 6 MRAHTTSHLLNAALRRVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI 65
M+ HT +H+LN ALR+VL + QK V D DF+ ++V V E+Y +I
Sbjct: 603 MKNHTGTHVLNYALRKVLADSDQKGSLVAPDRMRFDFT-NKAGMTVQQVKKAEEYAQQLI 661
Query: 66 ADQVQVDRRH-----------MRA--SEIYPDDVILIDISDKENVISREP---------- 102
+ QV ++ +RA E YPD V ++ + + + P
Sbjct: 662 DTKGQVYAKNSPLGEAKKVKGLRAMFDETYPDPVRVVAVGTPVEQLLQNPDAEEGQNTTV 721
Query: 103 --CCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAAVKQ 156
C GTH+ N HI + ++ G+R I LTG ++ A+ +L+A +++
Sbjct: 722 EFCGGTHLQNVSHIGRIVIASEEAIAKGIRRIVALTGPEAERAIARADRLTARLEE 777
>sp|A7HN59|SYA_FERNB Alanine--tRNA ligase OS=Fervidobacterium nodosum (strain ATCC 35602
/ DSM 5306 / Rt17-B1) GN=alaS PE=3 SV=1
Length = 867
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 2 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 60
R MR HT +H+L++ALR+VL + Q V DF+ Y + L+ D + +E
Sbjct: 551 RKSTMRNHTATHILHSALRKVLGSHVRQAGSLVEPTRLRFDFTHY-QALTKDEITKIENI 609
Query: 61 INDVIADQVQV-------DRRHMRAS-----EIYPDDVILIDISDKENVISREPCCGTHV 108
+N+VI + V D + E Y D V ++ +SD S E C GTHV
Sbjct: 610 VNEVILKAIPVVTEIKSYDEAVKEGAMALFEEKYGDFVRVVKVSD----FSEELCGGTHV 665
Query: 109 FNTGHIESCTVIGYKSYNHGVRSIKCLTGESS 140
NTG I ++ + + GVR I+ +TG +S
Sbjct: 666 KNTGEIGLFKIVSESAVSAGVRRIEAITGLNS 697
>sp|Q218Q3|SYA_RHOPB Alanine--tRNA ligase OS=Rhodopseudomonas palustris (strain BisB18)
GN=alaS PE=3 SV=1
Length = 890
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 58/181 (32%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 2 RLGCMRA-HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 59
R +RA H+ +HLL+ ALR+VL QK V D DF V+ + +S D + VE
Sbjct: 556 RRSSIRANHSATHLLHEALRQVLGDHIAQKGSLVAEDRLRFDF-VHQKPISADELRRVED 614
Query: 60 YINDVIADQVQVDRRHM----------RA--SEIYPDDVILIDISDK-----ENVI--SR 100
N+V+ + +V R M RA E Y D+V ++ + N + S
Sbjct: 615 IANEVVLENDEVTTRLMAVDDAREAGARALFGEKYGDEVRVVTMGKSARQHGSNALGWSV 674
Query: 101 EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTG----ESSKAAVENGKQLSAAVKQ 156
E C GTHV TG I ++ G + GVR I+ LTG +S+ AA++ K +A ++
Sbjct: 675 ELCGGTHVRRTGDIGLISITGESAVASGVRRIEALTGRFARQSANAAIDTAKATAAELRT 734
Query: 157 T 157
+
Sbjct: 735 S 735
>sp|B0UGC4|SYA_METS4 Alanine--tRNA ligase OS=Methylobacterium sp. (strain 4-46) GN=alaS
PE=3 SV=1
Length = 886
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 87/172 (50%), Gaps = 22/172 (12%)
Query: 2 RLGCMRAH-TTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 59
R +RAH + +HLL+ ALR+VL QK V + DFS + + ++ D VAAVE+
Sbjct: 556 RRAAIRAHHSATHLLHEALRQVLGDHVAQKGSLVSPERLRFDFS-HPKPMNDDEVAAVEE 614
Query: 60 YINDVIADQVQVDRRHM----------RA--SEIYPDDVILIDISD------KENVISRE 101
N V+ V + M RA E Y D+V ++ + + + S E
Sbjct: 615 MANRVLLQNGPVVTKLMAVDDAIATGARALFGEKYGDEVRVVSMGEDQGGDGRRRTFSVE 674
Query: 102 PCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAV-ENGKQLSA 152
C GTHV TG I TV+G + GVR I+ +TG++++ + E ++L+A
Sbjct: 675 LCGGTHVGRTGEIGLITVVGEGAVASGVRRIEAMTGDAARRHLAEESRRLAA 726
>sp|A4WV47|SYA_RHOS5 Alanine--tRNA ligase OS=Rhodobacter sphaeroides (strain ATCC 17025
/ ATH 2.4.3) GN=alaS PE=3 SV=1
Length = 883
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 57/178 (32%), Positives = 79/178 (44%), Gaps = 23/178 (12%)
Query: 2 RLGCMRA-HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 59
R +RA H+ +HLL+ ALRR L Q+ D DFS + + LS + +A VE
Sbjct: 555 RRSAIRANHSATHLLHEALRRALGDHVAQRGSLNAPDRLRFDFS-HSKALSAEELATVEA 613
Query: 60 YINDVIADQVQVDRRHM-----RA-------SEIYPDDVILIDISD--------KENVIS 99
+N I V+ R M RA E Y D+V ++ + S
Sbjct: 614 EVNQFIRSNGMVETRIMSPDDARALGAQALFGEKYGDEVRVVSMGTLAGSGKGMDGQTYS 673
Query: 100 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAAVKQT 157
E C GTHV G I C ++G + + GVR I+ LTGE + A + Q A V T
Sbjct: 674 LELCGGTHVARLGDIGLCVILGDSASSAGVRRIEALTGEGALAHLNEQMQRLAEVAAT 731
>sp|A9IK31|SYA_BORPD Alanine--tRNA ligase OS=Bordetella petrii (strain ATCC BAA-461 /
DSM 12804 / CCUG 43448) GN=alaS PE=3 SV=1
Length = 873
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 19/162 (11%)
Query: 2 RLGCMRAHTTSHLLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 60
R +R H+ +HL++ ALR+VL Q+ V D+ DF+ + LS + +A VE
Sbjct: 555 RARTVRNHSATHLMHKALRQVLGAHVQQRGSLVDPDKTRFDFA-HDAPLSAEQIAQVEAI 613
Query: 61 IN-DVIADQVQVDR-----------RHMRASEIYPDDVILIDISDKENVISREPCCGTHV 108
+N +V+A+Q R E Y D V ++DI SRE C GTHV
Sbjct: 614 VNAEVLANQPTQARVMAYDDAVKGGAMALFGEKYGDTVRVLDIG-----FSRELCGGTHV 668
Query: 109 FNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQL 150
TG I ++ GVR ++ +TG+++ A V+N L
Sbjct: 669 SRTGDIGLFKIVAEGGVAAGVRRVEAITGDNALAWVQNQNAL 710
>sp|Q1QMV7|SYA_NITHX Alanine--tRNA ligase OS=Nitrobacter hamburgensis (strain X14 / DSM
10229) GN=alaS PE=3 SV=2
Length = 891
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 23/172 (13%)
Query: 2 RLGCMRA-HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 59
R G +RA H+ +HLL+ ALR+VL Q+ V + DF V+ + +S D + +E
Sbjct: 556 RRGAIRANHSATHLLHEALRQVLGDHIAQRGSLVAPERLRFDF-VHNKPISADELRRIED 614
Query: 60 YINDVIADQVQVDRRHM----------RA--SEIYPDDVILIDISDK------ENVI--S 99
NDV+ + +V R M RA E Y D+V ++ + N + S
Sbjct: 615 IANDVVLENGEVTTRLMAVDDAREAGARALFGEKYGDEVRVVSMGSTGRQGAASNALGWS 674
Query: 100 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLS 151
E C GTHV TG I +V G + GVR I+ LTG ++ + QL+
Sbjct: 675 VELCGGTHVKRTGDIGLISVTGESAVASGVRRIEALTGHHARHHANDAIQLA 726
>sp|Q3ST43|SYA_NITWN Alanine--tRNA ligase OS=Nitrobacter winogradskyi (strain Nb-255 /
ATCC 25391) GN=alaS PE=3 SV=1
Length = 891
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Query: 2 RLGCMRA-HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 59
R +RA H+ +HLL+ ALR+VL Q+ V + DF+ + + +S D + +E
Sbjct: 556 RRSAIRANHSATHLLHEALRQVLGDHIAQRGSLVAPERLRFDFA-HNKPISADELRCIED 614
Query: 60 YINDVIADQVQVDRRHM----------RA--SEIYPDDVILIDI--SDKENVISR----- 100
NDV+ + +V R M RA E Y D+V ++ + +D+ S
Sbjct: 615 IANDVVLENGEVTTRLMAVDDAREAGARALFGEKYGDEVRVVSMGGTDRHGAASNALGWS 674
Query: 101 -EPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLS 151
E C GTHV TG I +V+G + GVR I+ LTG ++ + QL+
Sbjct: 675 VELCGGTHVKRTGDIGLISVVGESAVASGVRRIEALTGHQARHHANHAIQLA 726
>sp|P67009|SYA_BRUSU Alanine--tRNA ligase OS=Brucella suis biovar 1 (strain 1330)
GN=alaS PE=3 SV=1
Length = 885
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 24/172 (13%)
Query: 9 HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAD 67
H+ +HLL+ ALR L T QK V D DFS + + +S + + AVE N++I
Sbjct: 564 HSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFS-HPKPISAEELEAVENLANEIILQ 622
Query: 68 QVQVDRRHMRAS------------EIYPDDVILIDI------SDKENVISREPCCGTHVF 109
V R M E Y D+V ++ + S S E C GTHV
Sbjct: 623 NAPVTTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHGSKAGKAYSVELCGGTHVR 682
Query: 110 NTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENG----KQLSAAVKQT 157
TG I +I GVR ++ LTGE+++ +E K +++A+K T
Sbjct: 683 QTGDIGLVRIISEGGVAAGVRRLEALTGEAARLYLEEQDERVKAIASALKTT 734
>sp|B0CGZ9|SYA_BRUSI Alanine--tRNA ligase OS=Brucella suis (strain ATCC 23445 / NCTC
10510) GN=alaS PE=3 SV=1
Length = 885
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 24/172 (13%)
Query: 9 HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAD 67
H+ +HLL+ ALR L T QK V D DFS + + +S + + AVE N++I
Sbjct: 564 HSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFS-HPKPISAEELEAVENLANEIILQ 622
Query: 68 QVQVDRRHMRAS------------EIYPDDVILIDI------SDKENVISREPCCGTHVF 109
V R M E Y D+V ++ + S S E C GTHV
Sbjct: 623 NAPVTTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHGSKAGKAYSVELCGGTHVR 682
Query: 110 NTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENG----KQLSAAVKQT 157
TG I +I GVR ++ LTGE+++ +E K +++A+K T
Sbjct: 683 QTGDIGLVRIISEGGVAAGVRRLEALTGEAARLYLEEQDERVKAIASALKTT 734
>sp|A5VQX4|SYA_BRUO2 Alanine--tRNA ligase OS=Brucella ovis (strain ATCC 25840 / 63/290 /
NCTC 10512) GN=alaS PE=3 SV=1
Length = 885
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 24/172 (13%)
Query: 9 HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAD 67
H+ +HLL+ ALR L T QK V D DFS + + +S + + AVE N++I
Sbjct: 564 HSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFS-HPKPISAEELEAVENLANEIILQ 622
Query: 68 QVQVDRRHMRAS------------EIYPDDVILIDI------SDKENVISREPCCGTHVF 109
V R M E Y D+V ++ + S S E C GTHV
Sbjct: 623 NAPVTTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHGSKAGKAYSVELCGGTHVR 682
Query: 110 NTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENG----KQLSAAVKQT 157
TG I +I GVR ++ LTGE+++ +E K +++A+K T
Sbjct: 683 QTGDIGLVRIISEGGVAAGVRRLEALTGEAARLYLEEQDERVKAIASALKTT 734
>sp|P67008|SYA_BRUME Alanine--tRNA ligase OS=Brucella melitensis biotype 1 (strain 16M /
ATCC 23456 / NCTC 10094) GN=alaS PE=3 SV=1
Length = 885
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 24/172 (13%)
Query: 9 HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAD 67
H+ +HLL+ ALR L T QK V D DFS + + +S + + AVE N++I
Sbjct: 564 HSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFS-HPKPISAEELEAVENLANEIILQ 622
Query: 68 QVQVDRRHMRAS------------EIYPDDVILIDI------SDKENVISREPCCGTHVF 109
V R M E Y D+V ++ + S S E C GTHV
Sbjct: 623 NAPVTTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHGSKAGKAYSVELCGGTHVR 682
Query: 110 NTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENG----KQLSAAVKQT 157
TG I +I GVR ++ LTGE+++ +E K +++A+K T
Sbjct: 683 QTGDIGLVRIISEGGVAAGVRRLEALTGEAARLYLEEQDERVKAIASALKTT 734
>sp|A9M5L7|SYA_BRUC2 Alanine--tRNA ligase OS=Brucella canis (strain ATCC 23365 / NCTC
10854) GN=alaS PE=3 SV=1
Length = 885
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 24/172 (13%)
Query: 9 HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAD 67
H+ +HLL+ ALR L T QK V D DFS + + +S + + AVE N++I
Sbjct: 564 HSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFS-HPKPISAEELEAVENLANEIILQ 622
Query: 68 QVQVDRRHMRAS------------EIYPDDVILIDI------SDKENVISREPCCGTHVF 109
V R M E Y D+V ++ + S S E C GTHV
Sbjct: 623 NAPVTTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHGSKAGKAYSVELCGGTHVR 682
Query: 110 NTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENG----KQLSAAVKQT 157
TG I +I GVR ++ LTGE+++ +E K +++A+K T
Sbjct: 683 QTGDIGLVRIISEGGVAAGVRRLEALTGEAARLYLEEQDERVKAIASALKTT 734
>sp|Q57CU0|SYA_BRUAB Alanine--tRNA ligase OS=Brucella abortus biovar 1 (strain 9-941)
GN=alaS PE=3 SV=1
Length = 885
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 24/172 (13%)
Query: 9 HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAD 67
H+ +HLL+ ALR L T QK V D DFS + + +S + + AVE N++I
Sbjct: 564 HSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFS-HPKPISAEELEAVENLANEIILQ 622
Query: 68 QVQVDRRHMRAS------------EIYPDDVILIDI------SDKENVISREPCCGTHVF 109
V R M E Y D+V ++ + S S E C GTHV
Sbjct: 623 NAPVTTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHGSKAGKAYSVELCGGTHVR 682
Query: 110 NTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENG----KQLSAAVKQT 157
TG I +I GVR ++ LTGE+++ +E K +++A+K T
Sbjct: 683 QTGDIGLVRIISEGGVAAGVRRLEALTGEAARLYLEEQDERVKAIASALKTT 734
>sp|Q2YRU8|SYA_BRUA2 Alanine--tRNA ligase OS=Brucella abortus (strain 2308) GN=alaS PE=3
SV=1
Length = 885
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 24/172 (13%)
Query: 9 HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAD 67
H+ +HLL+ ALR L T QK V D DFS + + +S + + AVE N++I
Sbjct: 564 HSATHLLHEALRETLGTHVAQKGSLVAPDRLRFDFS-HPKPISAEELEAVENLANEIILQ 622
Query: 68 QVQVDRRHMRAS------------EIYPDDVILIDI------SDKENVISREPCCGTHVF 109
V R M E Y D+V ++ + S S E C GTHV
Sbjct: 623 NAPVTTRLMAVDDAIAEGAMALFGEKYGDEVRVVSMGTAKHGSKAGKAYSVELCGGTHVR 682
Query: 110 NTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENG----KQLSAAVKQT 157
TG I +I GVR ++ LTGE+++ +E K +++A+K T
Sbjct: 683 QTGDIGLVRIISEGGVAAGVRRLEALTGEAARLYLEEQDERVKAIASALKTT 734
>sp|A9BJE0|SYA_PETMO Alanine--tRNA ligase OS=Petrotoga mobilis (strain DSM 10674 / SJ95)
GN=alaS PE=3 SV=1
Length = 876
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
Query: 2 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 60
R + HT +HLL++ALR+V+ Q V + DF+ Y E L+ D + +E
Sbjct: 559 RKATEKNHTATHLLHSALRKVIGEHIRQAGSYVAPERLRFDFTHY-EPLTQDQIKQIEYL 617
Query: 61 INDVIADQVQVDRRHMRASEIYPDDVI------------LIDISDKENVISREPCCGTHV 108
IN+ I + V+ E DVI +++I D SRE C GTHV
Sbjct: 618 INEQIQKAIPVNIYLKSLEEAKSMDVIALFEEKYGEVVRIVEIDD----FSRELCGGTHV 673
Query: 109 FNTGHIESCTVIGYKSYNHGVRSIKCLTG-ESSKAAVE 145
NTG I ++ S + GVR I+ +TG ES A E
Sbjct: 674 SNTGEIGLFKILEESSISSGVRRIEAITGFESLNYATE 711
>sp|P61702|SYA_LACJO Alanine--tRNA ligase OS=Lactobacillus johnsonii (strain CNCM
I-12250 / La1 / NCC 533) GN=alaS PE=3 SV=1
Length = 882
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 56/174 (32%), Positives = 79/174 (45%), Gaps = 22/174 (12%)
Query: 2 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 60
R G HT +HLL+AALR VL T T+Q V D DF+ E ++ +A+VEK
Sbjct: 561 RRGLKHNHTATHLLHAALREVLGTHTHQAGSLVEPDYLRFDFTSL-EPMTKKEIASVEKL 619
Query: 61 INDVIADQVQVDRR--------HMRA----SEIYPDDVILIDISDKENVISREPCCGTHV 108
+N+ I +++ V M A E Y D V ++ I D S E C GTH
Sbjct: 620 VNEKIWEEIPVKTTVTDPDTGLKMGALALFGEKYGDTVRVVQIDD----FSTEFCGGTHC 675
Query: 109 FNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENG----KQLSAAVKQTK 158
NT I ++ + G R I +TG + V + K++ VK TK
Sbjct: 676 ENTDQIGMLKIVSESAVGAGTRRIIAVTGPEAYKYVTDRDEILKEVQDEVKATK 729
>sp|B2V709|SYA_SULSY Alanine--tRNA ligase OS=Sulfurihydrogenibium sp. (strain YO3AOP1)
GN=alaS PE=3 SV=1
Length = 876
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 2 RLGCMRAHTTSHLLNAALRRVLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKY 60
R MR HT +HLL+AALR VL +++ + SDE DF+ + E+++ + + AVE+
Sbjct: 561 RENIMRHHTATHLLHAALRNVLGDHVKQAGSLVSDEYLRFDFTHF-ESMTDEELKAVEEL 619
Query: 61 INDVIADQVQVDRRHMRASEIYPDDVILIDISDKENV-------ISREPCCGTHVFNTGH 113
+N I +V + M+ E + I +V IS+E C GTHV TG
Sbjct: 620 VNREIMKNEEVVCQEMQYEEALKSGAMAIFEEKYADVVRVISAGISKELCGGTHVKRTGD 679
Query: 114 IESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAAVK 155
I ++ + + G R I+ + G AVE G Q +K
Sbjct: 680 IGYFKILSESAVSSGTRRIEAVAG---IKAVEKGLQEHYIIK 718
>sp|A4SGJ6|SYA_PROVI Alanine--tRNA ligase OS=Prosthecochloris vibrioformis (strain DSM
265) GN=alaS PE=3 SV=2
Length = 885
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 51/161 (31%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 1 MRLGCMRAHTTSHLLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 59
+R R HT +HLL+A LR L QK V + DFS + + L+ + + AVE
Sbjct: 560 LRQATERNHTATHLLHAVLRHTLGAHVQQKGSLVNPERLRFDFSHFSK-LTPEEIDAVES 618
Query: 60 YINDVIADQVQVDRRHMRA--------------SEIYPDDVILIDISDKENVISREPCCG 105
+ND I Q + +H + Y D V +++I IS E C G
Sbjct: 619 AVNDCIR-QAEATLKHADVPYDDAITKGALAFFGDKYADLVRVVEIPG----ISVELCGG 673
Query: 106 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVEN 146
THV N G I ++G S GVR I+ LTG +++ + N
Sbjct: 674 THVDNVGQIGLFKIVGESSVAAGVRRIEALTGRAAEELMWN 714
>sp|A3DKB6|SYA_CLOTH Alanine--tRNA ligase OS=Clostridium thermocellum (strain ATCC 27405
/ DSM 1237) GN=alaS PE=3 SV=1
Length = 880
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 2 RLGCMRAHTTSHLLNAALRRVLTC-TYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 60
R+ R HTT+HLL+ ALR VL Q V D DF+ + ++ + + +VE
Sbjct: 559 RMAIARNHTTTHLLHKALRNVLGSHVNQAGSLVEPDRLRFDFTHF-SAMTPEEIKSVEDQ 617
Query: 61 INDVIADQVQVDRRHMRASEI------------YPDDVILIDISDKENVISREPCCGTHV 108
+N+ I + + VD R M E Y D V ++ I D S E C GTH+
Sbjct: 618 VNEKILESIAVDIREMSIDEARKMGATALFGEKYGDVVRVVKIGD----YSIELCGGTHL 673
Query: 109 FNTGHIESCTVIGYKSYNHGVRSIKCLTGESS 140
T ++ GVR I+ LTGE++
Sbjct: 674 NVTSQAGFIKIVSESGVASGVRRIEALTGEAA 705
>sp|A1WXK5|SYA_HALHL Alanine--tRNA ligase OS=Halorhodospira halophila (strain DSM 244 /
SL1) GN=alaS PE=3 SV=1
Length = 863
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 51/160 (31%), Positives = 70/160 (43%), Gaps = 18/160 (11%)
Query: 2 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 60
R +R H+ +HLL+AALR +L QK V D DFS Y E S + + +E
Sbjct: 545 REATVRNHSATHLLHAALREILGDHVQQKGSLVAPDRLRFDFSHY-EAPSREDLERIEAR 603
Query: 61 INDVIADQVQVDRRHMRASEI------------YPDDVILIDISDKENVISREPCCGTHV 108
+N I V+ HM E Y D V +I + D S+E C GTH
Sbjct: 604 VNQEILTNHPVEAAHMAYEEAVQVGAMALFGEKYGDTVRVISLGD----YSQELCGGTHA 659
Query: 109 FNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGK 148
TG I +I GVR I+ +TGE + V+ +
Sbjct: 660 ARTGDIGLFKIIDETGVAGGVRRIEAITGERAIGWVQEAE 699
>sp|Q045P6|SYA_LACGA Alanine--tRNA ligase OS=Lactobacillus gasseri (strain ATCC 33323 /
DSM 20243) GN=alaS PE=3 SV=1
Length = 882
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 2 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 60
R G HT +HLL+AALR VL T T+Q V D DF+ E ++ +A VEK
Sbjct: 561 RRGLKHNHTATHLLHAALREVLGTHTHQAGSLVEPDYLRFDFTSL-EPMTKKEIANVEKI 619
Query: 61 INDVIADQVQVDRR--------HMRA----SEIYPDDVILIDISDKENVISREPCCGTHV 108
+N+ I +++ V M A E Y D V ++ I D S E C GTH
Sbjct: 620 VNEKIWEEIPVKTTVTDPDTGLKMGALALFGEKYGDTVRVVQIDD----FSTEFCGGTHC 675
Query: 109 FNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENG----KQLSAAVKQTK 158
NT I ++ + G R I +TG + V + K++ VK TK
Sbjct: 676 ENTDQIGMLKIVSESAVGAGTRRIIAVTGPEAYKYVTDRDEILKEVQDEVKATK 729
>sp|Q3J0R1|SYA_RHOS4 Alanine--tRNA ligase OS=Rhodobacter sphaeroides (strain ATCC 17023
/ 2.4.1 / NCIB 8253 / DSM 158) GN=alaS PE=3 SV=1
Length = 883
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 57/173 (32%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 2 RLGCMRA-HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 59
R +RA H+ +HLL+ ALRR L Q+ D DFS + LS + +AAVE
Sbjct: 555 RRSAIRANHSATHLLHEALRRALGDHVAQRGSLNAPDRLRFDFS-HSRALSPEELAAVEA 613
Query: 60 YINDVIADQVQVDRRHM-----RA-------SEIYPDDVILIDISD--------KENVIS 99
+N I V+ R M RA E Y D+V ++ + S
Sbjct: 614 EVNGFIRSNGAVETRIMSPDDARALGAQALFGEKYGDEVRVVSMGTLAGSGKGTDGQTYS 673
Query: 100 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAV-ENGKQLS 151
E C GTHV G I C ++G + + GVR I+ LTGE + A + E K+L+
Sbjct: 674 LELCGGTHVSRLGDIGLCVILGDSASSAGVRRIEALTGEGALAYLNEQMKRLT 726
>sp|A9KLZ5|SYA2_CLOPH Alanine--tRNA ligase 2 OS=Clostridium phytofermentans (strain ATCC
700394 / DSM 18823 / ISDg) GN=alaS2 PE=3 SV=1
Length = 591
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 12/143 (8%)
Query: 7 RAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVI 65
R HT +HLLN ALR VL T +Q+ + + DFS + L+ + + VE+ +N+ I
Sbjct: 451 RLHTATHLLNGALRTVLGTDVFQRGSNITEERLRFDFS-FHRKLTKEELEEVERIVNEAI 509
Query: 66 ADQVQVDRRHMRASEIYPDDVILIDISDKENVI---------SREPCCGTHVFNTGHIES 116
+Q+ V M E + I DK + S+E C G HV NT ++S
Sbjct: 510 RNQIDVLCEEMTVKEAKELGAVGI-FEDKYGEVVKVYMIPGYSKEICGGPHVKNTSELKS 568
Query: 117 CTVIGYKSYNHGVRSIKCLTGES 139
+ ++ + GVR IK + G +
Sbjct: 569 FRTVKEEASSAGVRRIKAVIGSN 591
>sp|A6H0Y3|SYA_FLAPJ Alanine--tRNA ligase OS=Flavobacterium psychrophilum (strain
JIP02/86 / ATCC 49511) GN=alaS PE=3 SV=1
Length = 887
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 1 MRLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 59
+R + H+ +HL++ ALR +L T QK V D DFS + + +S D + VE
Sbjct: 571 LRASTSKNHSATHLMHLALRSILGTHVEQKGSLVNPDYLRFDFSHFSK-VSDDQLRQVEA 629
Query: 60 YINDVIADQVQV------------DRRHMRA-SEIYPDDVILIDISDKENVISREPCCGT 106
+N I Q+Q+ D+ M E Y D+V +I+ + S+E C G
Sbjct: 630 SVNAQIEAQLQLTEHRNIPIKEALDKGAMALFGEKYGDNVRMIEFGE-----SKELCGGI 684
Query: 107 HVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAAVKQ 156
HV NT I ++ + G+R I+ +TG++ KA N + + +K+
Sbjct: 685 HVKNTAQIWHFKILSEGAVAAGIRRIEAITGDAVKAFYTNQENTLSEIKE 734
>sp|A1BD33|SYA_CHLPD Alanine--tRNA ligase OS=Chlorobium phaeobacteroides (strain DSM
266) GN=alaS PE=3 SV=1
Length = 888
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 19/154 (12%)
Query: 2 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 60
R G R HT +HLL+AALRR L QK V S+ DFS + L+ + +A VE
Sbjct: 563 RQGTERNHTATHLLHAALRRTLGQHVQQKGSFVSSERLRFDFSHFAR-LTSEELAIVESE 621
Query: 61 INDVIAD--------QVQVDRRHMRAS-----EIYPDDVILIDISDKENVISREPCCGTH 107
+N+ I + D R + + Y D V +++I+ +S E C GTH
Sbjct: 622 VNEQIRSAEPVVKHQDIPYDEAIARGALAFFGDKYADRVRVVEIAG----LSVELCGGTH 677
Query: 108 VFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSK 141
V + G I ++ S GVR I+ LTG++++
Sbjct: 678 VDSIGQIGLFKIVSESSVASGVRRIEALTGKAAE 711
>sp|Q8RAH4|SYA_THETN Alanine--tRNA ligase OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=alaS PE=3
SV=1
Length = 878
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 2 RLGCMRAHTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKY 60
R G R HT +HLL+ AL+ VL Q V D DFS Y + +S + + +E+
Sbjct: 557 RKGAARNHTATHLLHKALKEVLGDHVNQSGSLVAYDRLRFDFSHY-QAVSKEELKKIEER 615
Query: 61 INDVIADQVQV---DRRHMRA---------SEIYPDDVILIDISDKENVISREPCCGTHV 108
+N+ I +Q+ V ++ + A +E Y D V ++ I D S E C GTHV
Sbjct: 616 VNEKIYEQLPVVVEEKNYEDALKEGAVALFTEKYGDKVRVVKIDD----YSMELCGGTHV 671
Query: 109 FNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAVENGKQLSAAVKQT 157
NT I ++ + G+R I+ LTG + + K++ V +T
Sbjct: 672 KNTSEIGIFKIVSESAVGAGLRRIEALTGIEAIKYLNEQKEILDRVSET 720
>sp|A5V3L0|SYA_SPHWW Alanine--tRNA ligase OS=Sphingomonas wittichii (strain RW1 / DSM
6014 / JCM 10273) GN=alaS PE=3 SV=1
Length = 887
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 23/169 (13%)
Query: 9 HTTSHLLNAALR-RVLTCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYINDVIAD 67
H+ +HLL+AALR R+ + QK V +D DFS + + L+ + +AA+E +N I +
Sbjct: 564 HSATHLLHAALRNRLGSHVTQKGSLVAADRFRFDFS-HPKALTPEDIAAIEAEVNRHIRE 622
Query: 68 QVQVDRRHMRAS------------EIYPDDVILIDISDK-----ENVISREPCCGTHVFN 110
+V R M E Y D+V ++ + S E C GTHV
Sbjct: 623 NDEVTTRLMTPDAAIEAGAMALFGEKYGDEVRVLSMGKAGRDLGAKSYSVELCGGTHVSA 682
Query: 111 TGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAV----ENGKQLSAAVK 155
G I +I + + GVR I+ LTGE+++ + E K+ +AA+K
Sbjct: 683 LGDIALFKIISESAVSSGVRRIEALTGEAARQWLTQRDEKLKEAAAALK 731
>sp|B1KXB7|SYA_CLOBM Alanine--tRNA ligase OS=Clostridium botulinum (strain Loch Maree /
Type A3) GN=alaS PE=3 SV=1
Length = 879
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 7 RAHTTSHLLNAALRRVLTCTYQKSCRVFSDE-CALDFSVYGETLSVDSVAAVEKYINDVI 65
+ HT +H+L+AAL +V+ Q+S DE DFS + E +S D + VEK +N I
Sbjct: 564 KNHTATHILHAALIKVVGDHVQQSGSYVDDERLRFDFSHF-EAVSEDELKEVEKIVNKEI 622
Query: 66 ADQVQVDRRHMRASEI------------YPDDVILIDISDKENVISREPCCGTHVFNTGH 113
V+ + M E Y DDV ++ + D S+E C GTHV N+G
Sbjct: 623 MKANAVNTKVMNIEEAKQQGAIALFDNKYKDDVRVVSVGD----FSKELCGGTHVSNSGQ 678
Query: 114 IESCTVIGYKSYNHGVRSIKCLTG 137
I V+ G+R I+ +T
Sbjct: 679 IGMFKVVSEAGVAAGIRRIEAVTA 702
>sp|A6U9N4|SYA_SINMW Alanine--tRNA ligase OS=Sinorhizobium medicae (strain WSM419)
GN=alaS PE=3 SV=1
Length = 887
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 25/174 (14%)
Query: 6 MRA-HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEKYIND 63
+RA H+ +HLL+ ALR VL T QK V + D S + + ++ + + VE+ N+
Sbjct: 560 LRANHSATHLLHEALREVLGTHVSQKGSLVAPERLRFDVS-HPKPMTSEELKVVEEMANE 618
Query: 64 VIADQVQVDRRHMRAS------------EIYPDDVILIDI------SDKENVISREPCCG 105
+I V R M E Y D+V ++ + S S E C G
Sbjct: 619 IIVQNTPVVTRLMSVDDAIAEGAMALFGEKYGDEVRVVSMGQGLHGSKAGKAYSVELCGG 678
Query: 106 THVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESSKAAV----ENGKQLSAAVK 155
THV TG I ++ + GVR ++ LTGE+++A + E K L+AA+K
Sbjct: 679 THVSATGDIGLVRIVSESAVGSGVRRVEALTGEAARAYLGEQDERVKALAAALK 732
>sp|A3PLJ1|SYA_RHOS1 Alanine--tRNA ligase OS=Rhodobacter sphaeroides (strain ATCC 17029
/ ATH 2.4.9) GN=alaS PE=3 SV=1
Length = 883
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 73/161 (45%), Gaps = 23/161 (14%)
Query: 2 RLGCMRA-HTTSHLLNAALRRVL-TCTYQKSCRVFSDECALDFSVYGETLSVDSVAAVEK 59
R +RA H+ +HLL+ ALRR L Q+ D DFS + LS + +AAVE
Sbjct: 555 RRSAIRANHSATHLLHEALRRALGDHVAQRGSLNAPDRLRFDFS-HSRALSPEELAAVEA 613
Query: 60 YINDVIADQVQVDRRHM-----RA-------SEIYPDDVILIDISD--------KENVIS 99
+N I V+ R M RA E Y D+V ++ + S
Sbjct: 614 EVNGFIRSNGAVETRIMSPDDARALGAQALFGEKYGDEVRVVSMGTLAGSGKGTDGQTYS 673
Query: 100 REPCCGTHVFNTGHIESCTVIGYKSYNHGVRSIKCLTGESS 140
E C GTHV G I C ++G + + GVR I+ LTGE +
Sbjct: 674 LELCGGTHVSRLGDIGLCVILGDSASSAGVRRIEALTGEGA 714
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,481,098
Number of Sequences: 539616
Number of extensions: 2037698
Number of successful extensions: 6353
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 232
Number of HSP's that attempted gapping in prelim test: 5115
Number of HSP's gapped (non-prelim): 761
length of query: 158
length of database: 191,569,459
effective HSP length: 108
effective length of query: 50
effective length of database: 133,290,931
effective search space: 6664546550
effective search space used: 6664546550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)