Query psy6341
Match_columns 465
No_of_seqs 373 out of 2593
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 23:56:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6341.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6341hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qb0_A Actin-related protein 4 100.0 1.4E-32 4.9E-37 292.2 4.6 172 2-203 201-489 (498)
2 3dwl_A Actin-related protein 3 100.0 2.3E-32 7.8E-37 286.3 -0.9 185 2-203 218-414 (427)
3 1k8k_B ARP2, actin-like protei 99.9 3.1E-28 1.1E-32 252.0 9.1 186 2-203 191-383 (394)
4 2fxu_A Alpha-actin-1, actin, a 99.9 9.6E-27 3.3E-31 238.9 4.5 175 2-203 187-367 (375)
5 1k8k_A ARP3, actin-like protei 99.9 1.1E-26 3.7E-31 241.3 4.6 192 2-203 202-405 (418)
6 4fo0_A Actin-related protein 8 99.9 5E-27 1.7E-31 254.0 1.2 181 2-203 285-582 (593)
7 3dwl_A Actin-related protein 3 99.9 1.1E-22 3.8E-27 212.9 7.9 159 211-389 136-338 (427)
8 3qb0_A Actin-related protein 4 99.8 1.7E-21 5.7E-26 207.2 7.0 119 211-337 127-309 (498)
9 1k8k_B ARP2, actin-like protei 99.8 1.3E-20 4.4E-25 194.8 6.6 155 211-390 117-310 (394)
10 4fo0_A Actin-related protein 8 99.8 1E-19 3.5E-24 196.7 8.7 87 211-305 211-327 (593)
11 2fxu_A Alpha-actin-1, actin, a 99.8 2.6E-19 8.8E-24 183.6 7.8 154 212-390 114-306 (375)
12 1k8k_A ARP3, actin-like protei 99.7 4.1E-18 1.4E-22 176.7 6.8 160 212-389 121-327 (418)
13 4am6_A Actin-like protein ARP8 99.7 5.4E-18 1.8E-22 183.1 0.6 183 2-203 309-644 (655)
14 4am6_A Actin-like protein ARP8 99.6 6.4E-16 2.2E-20 167.0 6.3 120 211-338 234-394 (655)
15 1jce_A ROD shape-determining p 98.5 1.9E-08 6.4E-13 101.0 -0.4 131 21-191 200-332 (344)
16 1jce_A ROD shape-determining p 97.9 2.4E-05 8.2E-10 78.2 9.2 84 215-305 112-218 (344)
17 3h1q_A Ethanolamine utilizatio 97.8 4E-05 1.4E-09 73.9 8.9 50 214-271 107-156 (272)
18 1dkg_D Molecular chaperone DNA 96.7 0.00034 1.1E-08 70.8 1.2 84 77-184 297-380 (383)
19 3h1q_A Ethanolamine utilizatio 96.5 0.0007 2.4E-08 65.0 1.7 61 97-183 212-272 (272)
20 3qfu_A 78 kDa glucose-regulate 96.0 0.0012 4.1E-08 66.7 0.2 68 96-184 324-391 (394)
21 2ych_A Competence protein PILM 95.9 0.011 3.9E-07 59.3 7.2 76 221-302 159-253 (377)
22 1dkg_D Molecular chaperone DNA 95.6 0.028 9.7E-07 56.5 8.7 54 215-271 152-205 (383)
23 2v7y_A Chaperone protein DNAK; 95.4 0.031 1.1E-06 59.0 8.5 53 215-271 126-178 (509)
24 2v7y_A Chaperone protein DNAK; 95.3 0.0033 1.1E-07 66.6 0.3 84 77-184 266-349 (509)
25 4a2a_A Cell division protein F 95.1 0.064 2.2E-06 55.4 9.4 155 221-389 176-340 (419)
26 3qfu_A 78 kDa glucose-regulate 94.3 0.1 3.6E-06 52.3 8.5 52 218-271 172-223 (394)
27 3i33_A Heat shock-related 70 k 94.2 0.0089 3E-07 60.7 0.2 85 77-184 315-399 (404)
28 3i33_A Heat shock-related 70 k 93.5 0.12 4.2E-06 52.2 7.1 62 210-271 169-231 (404)
29 4apw_A ALP12; actin-like prote 91.5 0.073 2.5E-06 53.0 2.4 43 225-271 147-189 (329)
30 2ych_A Competence protein PILM 91.3 0.06 2.1E-06 53.9 1.5 47 97-143 286-332 (377)
31 3js6_A Uncharacterized PARM pr 90.8 0.27 9.1E-06 49.6 5.7 47 225-271 152-201 (355)
32 2fsj_A Hypothetical protein TA 90.7 0.68 2.3E-05 46.2 8.6 138 226-390 162-309 (346)
33 2kho_A Heat shock protein 70; 90.3 0.078 2.7E-06 57.3 1.3 61 78-142 298-358 (605)
34 1yuw_A Heat shock cognate 71 k 89.7 0.076 2.6E-06 56.7 0.6 85 77-184 294-378 (554)
35 1yuw_A Heat shock cognate 71 k 89.2 1.5 5.1E-05 46.6 10.3 52 219-271 159-210 (554)
36 2zgy_A Plasmid segregation pro 80.9 3.3 0.00011 40.4 7.4 46 223-271 136-181 (320)
37 4a2a_A Cell division protein F 79.0 0.8 2.7E-05 47.1 2.3 47 97-143 304-354 (419)
38 3d2f_A Heat shock protein homo 77.7 0.5 1.7E-05 51.7 0.3 63 76-142 297-359 (675)
39 4gni_A Putative heat shock pro 74.7 1.2 4.2E-05 44.9 2.3 45 97-143 326-370 (409)
40 3d2f_A Heat shock protein homo 71.8 13 0.00044 40.5 9.6 53 219-271 158-214 (675)
41 4ehu_A Activator of 2-hydroxyi 67.2 0.91 3.1E-05 43.3 -0.7 28 114-141 203-230 (276)
42 2d0o_A DIOL dehydratase-reacti 54.7 8.4 0.00029 41.2 3.9 34 234-271 390-424 (610)
43 1nbw_A Glycerol dehydratase re 52.7 7.4 0.00025 41.7 3.1 17 255-271 410-426 (607)
44 4gni_A Putative heat shock pro 47.5 14 0.00047 37.0 4.1 54 218-271 169-222 (409)
45 4b9q_A Chaperone protein DNAK; 45.2 9.2 0.00032 41.0 2.5 44 97-142 315-358 (605)
46 4apw_A ALP12; actin-like prote 35.0 12 0.00042 36.6 1.4 25 115-141 276-300 (329)
47 3cet_A Conserved archaeal prot 34.3 18 0.00061 36.1 2.4 18 254-271 127-144 (334)
48 2kho_A Heat shock protein 70; 31.5 40 0.0014 36.0 4.7 51 220-272 156-206 (605)
49 3js6_A Uncharacterized PARM pr 29.4 9.4 0.00032 38.1 -0.6 26 116-141 289-316 (355)
50 4b9q_A Chaperone protein DNAK; 26.4 46 0.0016 35.5 4.1 60 210-271 146-205 (605)
51 2fsj_A Hypothetical protein TA 25.9 15 0.0005 36.4 0.1 14 117-130 296-309 (346)
52 1nbw_A Glycerol dehydratase re 21.4 44 0.0015 35.8 2.6 25 119-143 552-576 (607)
53 2d0o_A DIOL dehydratase-reacti 20.8 44 0.0015 35.7 2.5 25 119-143 550-574 (610)
No 1
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-32 Score=292.16 Aligned_cols=172 Identities=16% Similarity=0.214 Sum_probs=143.5
Q ss_pred HHHHHHHHhC------------------CCCCCCcc-------hHHHHHHhhhhcccccCC--hHHHHhhccCCCCccee
Q psy6341 2 KWILSLLRER------------------EIGIPPEQ-------SLETAKAIKERYSYICPD--IAKEFAKYDADPGKWMR 54 (465)
Q Consensus 2 ~yL~~lL~~r------------------g~~~~~~~-------e~~iv~~IKE~~CyVs~d--~~~e~~~~~~~~~~~~~ 54 (465)
+||+++|.++ ++++.... ++++|++|||++|||+.| +.++..... +...+
T Consensus 201 ~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iKE~~c~Va~~~~~~~~~~~~~---~~~~~ 277 (498)
T 3qb0_A 201 HLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECKETLCHICPTKTLEETKTELS---STAKR 277 (498)
T ss_dssp HHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHHHHTCCCCSSCHHHHHHHHHH---TCCCE
T ss_pred HHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHHHhhEEecCCccHhHHhhhcc---CcCce
Confidence 6899999875 44543321 566999999999999998 665532221 23468
Q ss_pred eEecCCCCCCCCCCCCCCCCceEEEeccc-ccc-cc-CCCCC--------------------------------------
Q psy6341 55 NLFYSPTSWKKSPSDRPSIPFFTQNFQFK-SFL-FS-FSNPD-------------------------------------- 93 (465)
Q Consensus 55 ~y~LP~~~~~~DG~~~~~~~~~~I~l~~E-rf~-PE-l~~~~-------------------------------------- 93 (465)
.|+|| || +.|.+|+| ||+ || ||+|+
T Consensus 278 ~yeLP------DG--------~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 343 (498)
T 3qb0_A 278 SIESP------WN--------EEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVPLKRTKPSGVNKSD 343 (498)
T ss_dssp EEECS------SS--------CEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCCCCBCC--------
T ss_pred EEECC------CC--------CEEEECchHhhhCchhhCCHhHcCCcccccccccccccccccccccccccccccccccc
Confidence 99999 99 99999999 999 76 44432
Q ss_pred ----------------------------------------------CCCchhhhhhcccccCCcccccccccceEEeccc
Q psy6341 94 ----------------------------------------------FTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGS 127 (465)
Q Consensus 94 ----------------------------------------------~~~gL~elI~~sI~~c~~d~R~~L~~NIVLsGGs 127 (465)
...||+++|++||++||.|+|+.||+||||+||+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d~r~~L~~nIvLsGGs 423 (498)
T 3qb0_A 344 KKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGT 423 (498)
T ss_dssp ---------------------------------------------CCSCCHHHHHHHHHHTSCTTTHHHHHTTEEEESGG
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHhCCHHHHHHHhcCEEEeCCc
Confidence 2468999999999999999999999999999999
Q ss_pred ccccchHHHHHHhhhhhhhhhhhhhccccCccceeeeeec---ccccceeeeecccccCCcccccceEEEeeeecccCC
Q psy6341 128 TMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIKVTEVSR---KFQGRRLHWYGHVERRDESYIGKRVERMEVRGRKGR 203 (465)
Q Consensus 128 Sl~~Gf~eRL~~EL~~l~p~~~~~~~~~~~~~~~v~v~~~---~~r~~~~aWiGgSilAsl~~~~~~~vtke~y~k~g~ 203 (465)
|+||||.+||++||+.++| .++++++++ ++| ++++|+||||||+++.|+++|++|++|.+.|.
T Consensus 424 t~~pGf~~Rl~~El~~l~p------------~~~i~v~~~~~~~er-~~s~WiGgsilasl~~f~~~witk~EY~E~G~ 489 (498)
T 3qb0_A 424 SSIPGLSDRLMTELNKILP------------SLKFRILTTGHTIER-QYQSWLGGSILTSLGTFHQLWVGKKEYEEVGV 489 (498)
T ss_dssp GGSTTHHHHHHHHHHHHST------------TSCCCEECCSCTGGG-GSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCC
T ss_pred cCchhHHHHHHHHHHHhCC------------CCeeEEEcCCCCCcc-CccEEcccEEEecCcchhceEEEHHHHhhhCc
Confidence 9999999999999999866 346777876 677 99999999999999999999999999988774
No 2
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=2.3e-32 Score=286.34 Aligned_cols=185 Identities=43% Similarity=0.706 Sum_probs=139.8
Q ss_pred HHHHHHHHhCCCCCCCcchHHHHHHhhhhcccccCChHHHHhhccCCCCcceeeEec--CCCCCCCCCCCCCCCCceEEE
Q psy6341 2 KWILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFY--SPTSWKKSPSDRPSIPFFTQN 79 (465)
Q Consensus 2 ~yL~~lL~~rg~~~~~~~e~~iv~~IKE~~CyVs~d~~~e~~~~~~~~~~~~~~y~L--P~~~~~~DG~~~~~~~~~~I~ 79 (465)
+||+++|+++++. ..+.+++++|||++|||+.|+.+|++.....+. ..+.|+| | ||. + +.|+
T Consensus 218 ~~L~~lL~~~~~~---~~~~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~-~~~~~~l~~~------~g~-----~-~~i~ 281 (427)
T 3dwl_A 218 YFVQSLLRDRNEP---DSSLKTAERIKEECCYVCPDIVKEFSRFDREPD-RYLKYASESI------TGH-----S-TTID 281 (427)
T ss_dssp HHHHHTTC-----------CHHHHHHHHHHCCCCSCHHHHHHHTTC------CCBCC---------------------CB
T ss_pred HHHHHHHHHcCCC---chhHHHHHHHHHhcCcccCCHHHHHHHhhcCcc-ccceeEeeCC------CCC-----e-eEEE
Confidence 6899999999987 346689999999999999999999876543222 2567777 6 670 0 4899
Q ss_pred ecccccc-cc-CCCCC-----CCCchhhhhhcccccCCcccccccccceEEecccccccchHHHHHHhhhhhhhhhhhhh
Q psy6341 80 FQFKSFL-FS-FSNPD-----FTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLS 152 (465)
Q Consensus 80 l~~Erf~-PE-l~~~~-----~~~gL~elI~~sI~~c~~d~R~~L~~NIVLsGGsSl~~Gf~eRL~~EL~~l~p~~~~~~ 152 (465)
++.|||+ || ||+|+ ...||+++|.++|++||+|+|+.||+||||+||+|+||||.+||++||+++++.+++..
T Consensus 282 ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~ 361 (427)
T 3dwl_A 282 VGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRS 361 (427)
T ss_dssp CCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC----
T ss_pred EChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhcccc
Confidence 9999999 88 45552 13799999999999999999999999999999999999999999999999987543321
Q ss_pred ccc---cCccceeeeeecccccceeeeecccccCCcccccceEEEeeeecccCC
Q psy6341 153 ETL---SGGYIKVTEVSRKFQGRRLHWYGHVERRDESYIGKRVERMEVRGRKGR 203 (465)
Q Consensus 153 ~~~---~~~~~~v~v~~~~~r~~~~aWiGgSilAsl~~~~~~~vtke~y~k~g~ 203 (465)
... .+..++++++++++| +|++|+||||||+++.|+++|++|++|.+.|.
T Consensus 362 ~~~~~~~p~~~~vkv~~~~~r-~~s~WiGGSilasl~~f~~~witk~EYeE~G~ 414 (427)
T 3dwl_A 362 EMLSGAKSGGVDVNVISHKRQ-RNAVWFGGSLLAQTPEFGSYCHTKADYEEYGA 414 (427)
T ss_dssp ---------CCCCCEECCTTC-TTHHHHHHHHHHHSTTHHHHSEEHHHHHHSCG
T ss_pred ccccccCCCceeEEEecCCcc-ccceecCceeeccccchhheeEEHHHHhhhCh
Confidence 111 134678999999988 99999999999999999999999999998875
No 3
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.95 E-value=3.1e-28 Score=251.97 Aligned_cols=186 Identities=21% Similarity=0.239 Sum_probs=116.7
Q ss_pred HHHHHHHHhCCCCCCCcchHHHHHHhhhhcccccCChHHHHhhccCCCCcceeeEecCCCCCCCCCCCCCCCCceEEEec
Q psy6341 2 KWILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTSWKKSPSDRPSIPFFTQNFQ 81 (465)
Q Consensus 2 ~yL~~lL~~rg~~~~~~~e~~iv~~IKE~~CyVs~d~~~e~~~~~~~~~~~~~~y~LP~~~~~~DG~~~~~~~~~~I~l~ 81 (465)
+||+++|.++++++.+..+.+++++|||++|||+.|+.++++.... .+.....|+|| || +.++++
T Consensus 191 ~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~-~~~~~~~~~lp------dg--------~~i~i~ 255 (394)
T 1k8k_B 191 RYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALE-TTVLVESYTLP------DG--------RIIKVG 255 (394)
T ss_dssp HHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHH-CSTTCEEEECT------TS--------CEEEEC
T ss_pred HHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhcc-CCcCceEEECC------CC--------CEEEEC
Confidence 6899999999999987677899999999999999999888754321 12345789999 89 999999
Q ss_pred ccccc-cc-CCCCC----CCCchhhhhhcccccCCcccccccccceEEecccccccchHHHHHHhhhhhhhhhhhhhccc
Q psy6341 82 FKSFL-FS-FSNPD----FTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETL 155 (465)
Q Consensus 82 ~Erf~-PE-l~~~~----~~~gL~elI~~sI~~c~~d~R~~L~~NIVLsGGsSl~~Gf~eRL~~EL~~l~p~~~~~~~~~ 155 (465)
.|||+ || ||.|+ ...||+++|.++|.+||+|+|+.|++||||+||+|+||||.+||++||..++..+.......
T Consensus 256 ~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~~~~~~~~ 335 (394)
T 1k8k_B 256 GERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVE 335 (394)
T ss_dssp THHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHHHHHHHTCSSCCC
T ss_pred chhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHHHHhhhhcccccC
Confidence 99999 88 45552 16799999999999999999999999999999999999999999999998762110000001
Q ss_pred cCccceeeeeecccccceeeeecccccCCccccc-ceEEEeeeecccCC
Q psy6341 156 SGGYIKVTEVSRKFQGRRLHWYGHVERRDESYIG-KRVERMEVRGRKGR 203 (465)
Q Consensus 156 ~~~~~~v~v~~~~~r~~~~aWiGgSilAsl~~~~-~~~vtke~y~k~g~ 203 (465)
.+..+++++++++++ .+++|+|||++|+++.|+ +++++|++|.+.|.
T Consensus 336 ~p~~~~v~v~~~~~~-~~~~w~Ggsilasl~~f~~~~~itk~eY~e~G~ 383 (394)
T 1k8k_B 336 KLSKFKIRIEDPPRR-KHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGV 383 (394)
T ss_dssp TTCCCCC------------------------------------------
T ss_pred CCCceEEEEecCCCc-ceeEEhhhHHhhCCcCCccceeecHHHHhhhCH
Confidence 123457888888877 999999999999999999 99999999998775
No 4
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.92 E-value=9.6e-27 Score=238.91 Aligned_cols=175 Identities=21% Similarity=0.330 Sum_probs=150.0
Q ss_pred HHHHHHHHhCCCCCCCcchHHHHHHhhhhcccccCChHHHHhhccCCCCcceeeEecCCCCCCCCCCCCCCCCceEEEec
Q psy6341 2 KWILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTSWKKSPSDRPSIPFFTQNFQ 81 (465)
Q Consensus 2 ~yL~~lL~~rg~~~~~~~e~~iv~~IKE~~CyVs~d~~~e~~~~~~~~~~~~~~y~LP~~~~~~DG~~~~~~~~~~I~l~ 81 (465)
+||.++|.++++++.+..+.+++++|||++|||+.|+.+++..... .+.....|+|| || +.++++
T Consensus 187 ~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~-~~~~~~~~~lp------dg--------~~i~i~ 251 (375)
T 2fxu_A 187 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAAS-SSSLEKSYELP------DG--------QVITIG 251 (375)
T ss_dssp HHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHH-CSTTCEEEECT------TS--------CEEEES
T ss_pred HHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcc-cCccCeEEECC------CC--------CEEEEC
Confidence 5899999999999876667789999999999999999888754321 12345789999 89 999999
Q ss_pred ccccc-cc-CCCCC----CCCchhhhhhcccccCCcccccccccceEEecccccccchHHHHHHhhhhhhhhhhhhhccc
Q psy6341 82 FKSFL-FS-FSNPD----FTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETL 155 (465)
Q Consensus 82 ~Erf~-PE-l~~~~----~~~gL~elI~~sI~~c~~d~R~~L~~NIVLsGGsSl~~Gf~eRL~~EL~~l~p~~~~~~~~~ 155 (465)
.|||. || ||.|. ...||+++|.++|.+||+++|+.|++||||+||+|+||||.+||++||..+.|.
T Consensus 252 ~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~-------- 323 (375)
T 2fxu_A 252 NERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPS-------- 323 (375)
T ss_dssp THHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCT--------
T ss_pred hhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCC--------
Confidence 99998 76 34442 167999999999999999999999999999999999999999999999987663
Q ss_pred cCccceeeeeecccccceeeeecccccCCcccccceEEEeeeecccCC
Q psy6341 156 SGGYIKVTEVSRKFQGRRLHWYGHVERRDESYIGKRVERMEVRGRKGR 203 (465)
Q Consensus 156 ~~~~~~v~v~~~~~r~~~~aWiGgSilAsl~~~~~~~vtke~y~k~g~ 203 (465)
..+++++..+++ .+++|+|||++|+++.|++.+++|++|.+.|.
T Consensus 324 ---~~~v~v~~~~~p-~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~ 367 (375)
T 2fxu_A 324 ---TMKIKIIAPPER-KYSVWIGGSILASLSTFQQMWITKQEYDEAGP 367 (375)
T ss_dssp ---TCCCCEECCTTT-TSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCG
T ss_pred ---CeeEEEEcCCCC-CccEEcchHHhhCcccHhhceeeHHHHhhhCh
Confidence 345677777777 99999999999999999999999999988774
No 5
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.92 E-value=1.1e-26 Score=241.32 Aligned_cols=192 Identities=54% Similarity=0.877 Sum_probs=153.9
Q ss_pred HHHHHHHHhCCCCCCCcchHHHHHHhhhhcccccCChHHHHhhccCCCCcceeeEecCCCCCCCCCCCCCCCCceEEEec
Q psy6341 2 KWILSLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTSWKKSPSDRPSIPFFTQNFQ 81 (465)
Q Consensus 2 ~yL~~lL~~rg~~~~~~~e~~iv~~IKE~~CyVs~d~~~e~~~~~~~~~~~~~~y~LP~~~~~~DG~~~~~~~~~~I~l~ 81 (465)
+||.++|.++++++....+.+++++|||++|||+.|+.+++++.....+.....|+|| ||... ..+.+.++
T Consensus 202 ~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lp------d~~~~---~~~~i~l~ 272 (418)
T 1k8k_A 202 YFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGI------NAISK---KEFSIDVG 272 (418)
T ss_dssp HHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEE------CTTTC---CEEEEEEC
T ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccHHHHHHhhcccccccceeEECC------CCCCC---cccEEEeC
Confidence 5899999999998876677899999999999999999888754322222334689999 66100 01489999
Q ss_pred ccccc-cc-CCCCC-----CCCchhhhhhcccccCCcccccccccceEEecccccccchHHHHHHhhhhhhhhhhhhhcc
Q psy6341 82 FKSFL-FS-FSNPD-----FTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSET 154 (465)
Q Consensus 82 ~Erf~-PE-l~~~~-----~~~gL~elI~~sI~~c~~d~R~~L~~NIVLsGGsSl~~Gf~eRL~~EL~~l~p~~~~~~~~ 154 (465)
.|||+ || ||+|+ ...+|+++|.++|.+||.++|+.+++||||+||+|++|||.+||++||..+++.+.+....
T Consensus 273 ~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~ 352 (418)
T 1k8k_A 273 YERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEE 352 (418)
T ss_dssp THHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHHHHHHHHhhccccccccc
Confidence 99998 77 44442 1269999999999999999999999999999999999999999999999987654322110
Q ss_pred -----ccCccceeeeeecccccceeeeecccccCCcccccceEEEeeeecccCC
Q psy6341 155 -----LSGGYIKVTEVSRKFQGRRLHWYGHVERRDESYIGKRVERMEVRGRKGR 203 (465)
Q Consensus 155 -----~~~~~~~v~v~~~~~r~~~~aWiGgSilAsl~~~~~~~vtke~y~k~g~ 203 (465)
..+..+++++++++++ ++++|+|||++|+++.|++++++|++|.+.|.
T Consensus 353 ~~~~~~~p~~~~v~v~~~~~~-~~~~w~Ggsilasl~~f~~~~itk~ey~e~G~ 405 (418)
T 1k8k_A 353 LSGGRLKPKPIDVQVITHHMQ-RYAVWFGGSMLASTPEFYQVCHTKKDYEEIGP 405 (418)
T ss_dssp HC----CCCCCCCCEECCTTC-TTHHHHHHHHHTTSHHHHHHSEEHHHHHHHCG
T ss_pred cccccCCCCceeEEEeCCCcc-ccceeHhHHHHHcCccHhheEEEHHHHhhhCH
Confidence 1134567888888887 99999999999999999999999999988775
No 6
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.92 E-value=5e-27 Score=254.00 Aligned_cols=181 Identities=15% Similarity=0.135 Sum_probs=123.6
Q ss_pred HHHHHHHHhCCCCCCC-----cchHHHHHHhhhhcccccCChHHHHhhc--cCCC-------------------------
Q psy6341 2 KWILSLLREREIGIPP-----EQSLETAKAIKERYSYICPDIAKEFAKY--DADP------------------------- 49 (465)
Q Consensus 2 ~yL~~lL~~rg~~~~~-----~~e~~iv~~IKE~~CyVs~d~~~e~~~~--~~~~------------------------- 49 (465)
+||++||.++|+.+.. ..+.+++++|||++|||+.|+..+.... ...+
T Consensus 285 ~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p 364 (593)
T 4fo0_A 285 RCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISGLQDHEFQIRHPDSPALLYQFRLGDEKLQAPMALFYP 364 (593)
T ss_dssp HHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEEEEEEECCTTSCEEEEEEEECTHHHHHHHTTTSG
T ss_pred HHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchHHhhhhhhhcccCCCCceeeEEeccchhhcCchhhcCh
Confidence 6999999999987754 3477899999999999998865432100 0000
Q ss_pred -------------------------------------------CcceeeEecCCCCCCCCCCCCCCCCceEEEecccccc
Q psy6341 50 -------------------------------------------GKWMRNLFYSPTSWKKSPSDRPSIPFFTQNFQFKSFL 86 (465)
Q Consensus 50 -------------------------------------------~~~~~~y~LP~~~~~~DG~~~~~~~~~~I~l~~Erf~ 86 (465)
......|.+| || +.+.++.|||.
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~g--------~~~~~~~e~~~ 430 (593)
T 4fo0_A 365 ATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSAKATADRKSASKP------IG--------FEGDLRGQSSD 430 (593)
T ss_dssp GGGCCCSSCCEEECC-----------------------------------------------------------------
T ss_pred hhhcccccccchhhhhcccCcccchhhhhhhhcccchhhhhhcccccccccCC------CC--------ccccccccccc
Confidence 0012234444 45 78888999999
Q ss_pred -cc-CCCCC------------------------------------CCCchhhhhhcccccCC-cccccccccceEEeccc
Q psy6341 87 -FS-FSNPD------------------------------------FTTPISEIVDTVIQNCP-IDVRRPLYHNIVLSGGS 127 (465)
Q Consensus 87 -PE-l~~~~------------------------------------~~~gL~elI~~sI~~c~-~d~R~~L~~NIVLsGGs 127 (465)
|| +|.++ ...||+++|++||.+|+ .|+|+.||+||||+||+
T Consensus 431 ~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~~~~D~r~~L~~NIvltGG~ 510 (593)
T 4fo0_A 431 LPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSIDCCSSDDTKKKMYSSILVVGGG 510 (593)
T ss_dssp ----------------------------------------CHHHHSCCCHHHHHHHHHHTCSSHHHHHHHHHEEEEESST
T ss_pred CchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhCCcHHHHHHHhCCEEEEchh
Confidence 87 34432 03599999999999999 59999999999999999
Q ss_pred ccccchHHHHHHhhhhhhhhhhhhhccccCccceeeeeecc---cccceeeeecccccCCcccccceEEEeeeecccCC
Q psy6341 128 TMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIKVTEVSRK---FQGRRLHWYGHVERRDESYIGKRVERMEVRGRKGR 203 (465)
Q Consensus 128 Sl~~Gf~eRL~~EL~~l~p~~~~~~~~~~~~~~~v~v~~~~---~r~~~~aWiGgSilAsl~~~~~~~vtke~y~k~g~ 203 (465)
|+||||.+||++||+.++|...+.. ..++++++++ ++ ++++|+||||||+++.|+.+|++|++|.+.|.
T Consensus 511 s~~pGf~~RL~~eL~~~~p~~~~~~------~~~v~v~~~p~~~d~-~~~aW~GgSilasL~~f~~~wItk~EYeE~G~ 582 (593)
T 4fo0_A 511 LMFHKAQEFLQHRILNKMPPSFRRI------IENVDVITRPKDMDP-RLIAWKGGAVLACLDTTQELWIYQREWQRFGV 582 (593)
T ss_dssp TCCBTHHHHHHHHHHHHSCHHHHHH------SSCCEEESSGGGCCT-TTHHHHHHHHHHHCGGGGGTCEEHHHHHHHTT
T ss_pred hchhcHHHHHHHHHHHhCcchhccc------cceEEEECCCCCCCC-ceeeehhhHHHhcCccHHHeeECHHHHHhhCc
Confidence 9999999999999999988644321 2357778776 45 99999999999999999999999999988874
No 7
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.86 E-value=1.1e-22 Score=212.91 Aligned_cols=159 Identities=46% Similarity=0.666 Sum_probs=113.3
Q ss_pred ccccccchhhhhhccCcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeec-------------------
Q psy6341 211 KDCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPV------------------- 271 (465)
Q Consensus 211 ~d~ve~~~EllFE~f~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV------------------- 271 (465)
+..+++|+|+|||+||||++|++.+++||+|++....+..+++++|||||+|+++|||+||
T Consensus 136 ~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~ 215 (427)
T 3dwl_A 136 PENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRD 215 (427)
T ss_dssp HHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHH
T ss_pred HHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHH
Confidence 4567999999999999999999999999999982110011126899999999999999999
Q ss_pred ------hhhhhcCCCCCCcCcHHHHHHHHHhcccccccHHHHHHHhhc----cccccC--CCCC-----------CCCeE
Q psy6341 272 ------SLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYVR----NKVWKQ--PKLS-----------RNDTL 328 (465)
Q Consensus 272 ------~lL~~~~~~~~~~~~~~iv~~IKE~lCyVs~Dy~~el~~~~~----~~~~~l--~~l~-----------~~~ei 328 (465)
++|.++++. ..+.+++++|||++|||+.||.+|+++... .+.|.+ ++.. ..+|+
T Consensus 216 lt~~L~~lL~~~~~~---~~~~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~ 292 (427)
T 3dwl_A 216 VTYFVQSLLRDRNEP---DSSLKTAERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEI 292 (427)
T ss_dssp HHHHHHHTTC-----------CHHHHHHHHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGG
T ss_pred HHHHHHHHHHHcCCC---chhHHHHHHHHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhh
Confidence 444455554 567899999999999999999999986532 234443 2321 14899
Q ss_pred EecccccccC--CcccHHHHHHHHHHhcccChhHHHHhhhccCCccccccccceEEEeCCCCC
Q psy6341 329 IFVPILLRSL--PKQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNSYSIVLTRPSAP 389 (465)
Q Consensus 329 lF~P~~ig~~--~~~se~ia~~ike~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (465)
||+|+++|.+ .+..+.+.++|.. +-+|+++.+. ++ ||||||++-
T Consensus 293 LF~P~~~g~~~~~gI~~~i~~sI~~----c~~dlr~~L~----------~n---IvLtGG~sl 338 (427)
T 3dwl_A 293 FFNPEIASSDFLTPLPELVDNVVQS----SPIDVRKGLY----------KN---IVLSGGSTL 338 (427)
T ss_dssp GTCGGGTCSSCCSCHHHHHHHHHHT----SCHHHHHHHH----------HC---EEEESGGGC
T ss_pred ccCchhcCCccCCCccHHHHHHHHh----CCHHHHHHHh----------CC---EEEEccCcC
Confidence 9999999974 4555555555544 5667655554 67 999999984
No 8
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.7e-21 Score=207.23 Aligned_cols=119 Identities=18% Similarity=0.261 Sum_probs=93.0
Q ss_pred ccccccchhhhhhccCcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeec-------------------
Q psy6341 211 KDCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPV------------------- 271 (465)
Q Consensus 211 ~d~ve~~~EllFE~f~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV------------------- 271 (465)
+..+++|+|+|||+||||++|++.+++||+|++ |+++|||||+|+++|||+||
T Consensus 127 ~~~Re~~~eilFE~f~vpav~l~~~~vlalya~--------G~~tglVVDiG~g~T~vvPI~~G~~l~~ai~rl~vgG~~ 198 (498)
T 3qb0_A 127 TENRKKSLEVLLEGMQFEACYLAPTSTCVSFAA--------GRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKF 198 (498)
T ss_dssp HHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHH--------TCSSEEEEEECSSCEEEEEEETTEECGGGCEEESCSHHH
T ss_pred HHHHHHHHHHHHhhcCCCeEeecchHHHHHHHc--------CCCeEEEEEcCCCcEEEEEEeCCEEccccceeccccHHH
Confidence 345689999999999999999999999999999 99999999999999999999
Q ss_pred ------hhhhhc------------------CCCCCCcC-------cHHHHHHHHHhccccccc--HHHHHHHhh--cccc
Q psy6341 272 ------SLLRER------------------EIGIPPEQ-------SLETAKAIKERYSYICPD--IAKEFAKYV--RNKV 316 (465)
Q Consensus 272 ------~lL~~~------------------~~~~~~~~-------~~~iv~~IKE~lCyVs~D--y~~el~~~~--~~~~ 316 (465)
++|+++ ++.+.+.. +.+++++|||++|||+.| |.++..... ..+.
T Consensus 199 lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iKE~~c~Va~~~~~~~~~~~~~~~~~~~ 278 (498)
T 3qb0_A 199 INHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECKETLCHICPTKTLEETKTELSSTAKRS 278 (498)
T ss_dssp HHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHHHHTCCCCSSCHHHHHHHHHHTCCCEE
T ss_pred HHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHHHhhEEecCCccHhHHhhhccCcCceE
Confidence 444433 22232221 456999999999999997 666543322 2456
Q ss_pred ccCCCCC----------CCCeEEeccccccc
Q psy6341 317 WKQPKLS----------RNDTLIFVPILLRS 337 (465)
Q Consensus 317 ~~l~~l~----------~~~eilF~P~~ig~ 337 (465)
|.+||.. ..||+||+|+++|+
T Consensus 279 yeLPDG~~i~lg~E~Rf~~pE~LF~P~~~g~ 309 (498)
T 3qb0_A 279 IESPWNEEIVFDNETRYGFAEELFLPKEDDI 309 (498)
T ss_dssp EECSSSCEEEECHHHHHHHHHTTTSCCGGGS
T ss_pred EECCCCCEEEECchHhhhCchhhCCHhHcCC
Confidence 7777754 12778999999876
No 9
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.81 E-value=1.3e-20 Score=194.84 Aligned_cols=155 Identities=32% Similarity=0.453 Sum_probs=90.3
Q ss_pred ccccccchhhhhhccCcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeec-------------------
Q psy6341 211 KDCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPV------------------- 271 (465)
Q Consensus 211 ~d~ve~~~EllFE~f~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV------------------- 271 (465)
+..+++|+|++||.||+|++++..++++|+|++ |+++|+|||+|+++|+|+||
T Consensus 117 ~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~--------g~~~~lVVDiG~g~T~v~pv~~G~~~~~~~~~~~~GG~~ 188 (394)
T 1k8k_B 117 TKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQ--------GLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRD 188 (394)
T ss_dssp ---------------------------------------------CCEEEECSSCEEEECEETTEECSTTCEEESCCHHH
T ss_pred HHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhC--------CCceEEEEEcCCCceEeeeeECCEEcccceEEeeccHHH
Confidence 456789999999999999999999999999999 89999999999999999999
Q ss_pred ------hhhhhcCCCCCCcCcHHHHHHHHHhcccccccHHHHHHHhhc----cccccCCCCC---------CCCeEEecc
Q psy6341 272 ------SLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYVR----NKVWKQPKLS---------RNDTLIFVP 332 (465)
Q Consensus 272 ------~lL~~~~~~~~~~~~~~iv~~IKE~lCyVs~Dy~~el~~~~~----~~~~~l~~l~---------~~~eilF~P 332 (465)
++|.++++++....+..++++|||++|||+.|+.++++...+ ...|.+|+.. ..+|+||+|
T Consensus 189 lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~lpdg~~i~i~~erf~~~E~Lf~p 268 (394)
T 1k8k_B 189 ITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQP 268 (394)
T ss_dssp HHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECTTSCEEEECTHHHHTGGGGTCG
T ss_pred HHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhccCCcCceEEECCCCCEEEECchhhcChHhhCCc
Confidence 566667788877788999999999999999999999876532 2356566532 347899999
Q ss_pred ccccc-CCcccHHHHHHHHHHhcccChhHHHHhhhccCCccccccccceEEEeCCCCCC
Q psy6341 333 ILLRS-LPKQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNSYSIVLTRPSAPR 390 (465)
Q Consensus 333 ~~ig~-~~~~se~ia~~ike~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (465)
+++|. ..+..+.+.++|.. +-.|++++ .+.+ ||||||++--
T Consensus 269 ~~~~~~~~~i~~~i~~~i~~----~~~d~r~~----------l~~n---IvLtGG~s~~ 310 (394)
T 1k8k_B 269 HLINVEGVGVAELLFNTIQA----ADIDTRSE----------FYKH---IVLSGGSTMY 310 (394)
T ss_dssp GGGTCCSCCHHHHHHHHHHH----SCTTTHHH----------HHTT---CEEESGGGCS
T ss_pred hhccCCCCCHHHHHHHHHHh----CCHHHHHH----------HHhC---EEEeCccccc
Confidence 99987 55666666666654 34454433 4467 9999999753
No 10
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.79 E-value=1e-19 Score=196.72 Aligned_cols=87 Identities=21% Similarity=0.255 Sum_probs=77.2
Q ss_pred ccccccchhhhhhccCcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeec-------------------
Q psy6341 211 KDCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPV------------------- 271 (465)
Q Consensus 211 ~d~ve~~~EllFE~f~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV------------------- 271 (465)
+..+++|+|+|||+|+||++|++.+++||+||+ |++||||||+|++.|||+||
T Consensus 211 ~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~--------G~~tglVVDiG~~~T~v~PV~dG~~l~~~~~rl~~GG~~ 282 (593)
T 4fo0_A 211 KQHVKELVNMILMKMGFSGIVVHQESVCATYGS--------GLSSTCIVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGSD 282 (593)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHH--------TCSEEEEEEECSSCEEEEEEESSCBCGGGCEEESCCHHH
T ss_pred HHHHHHHHHHHHHhcCCCeEEeechHHHHHHHC--------CCCceEEEEeCCCceeeeeeECCEEehhheEEecccHHH
Confidence 567799999999999999999999999999999 99999999999999999999
Q ss_pred ------hhhhhcCCCCC-----CcCcHHHHHHHHHhcccccccHH
Q psy6341 272 ------SLLREREIGIP-----PEQSLETAKAIKERYSYICPDIA 305 (465)
Q Consensus 272 ------~lL~~~~~~~~-----~~~~~~iv~~IKE~lCyVs~Dy~ 305 (465)
++|..+++.+. ...+..++++|||++|||+.|+.
T Consensus 283 lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~ 327 (593)
T 4fo0_A 283 VSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDIS 327 (593)
T ss_dssp HHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCC
T ss_pred HHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchH
Confidence 56666665443 24578899999999999998864
No 11
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.77 E-value=2.6e-19 Score=183.62 Aligned_cols=154 Identities=34% Similarity=0.495 Sum_probs=120.2
Q ss_pred cccccchhhhhhccCcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeec--------------------
Q psy6341 212 DCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPV-------------------- 271 (465)
Q Consensus 212 d~ve~~~EllFE~f~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV-------------------- 271 (465)
..+++|+|++||.||+|++++.+++++|+|++ |.++|+|||+|+++|+|+||
T Consensus 114 ~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~--------g~~~~lVvDiG~gtt~v~~v~~G~~~~~~~~~~~~GG~~l 185 (375)
T 2fxu_A 114 ANREKMTQIMFETFNVPAMYVAIQAVLSLYAS--------GRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDL 185 (375)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHT--------TCSSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHH
T ss_pred HHHHHHHHHHHHhcCcceEEEccchheeeeec--------CCCeEEEEEcCCCceEEeEeECCEEeccceEEeccCHHHH
Confidence 45688999999999999999999999999999 88999999999999999999
Q ss_pred -----hhhhhcCCCCCCcCcHHHHHHHHHhcccccccHHHHHHHhhc----cccccCCCCC---------CCCeEEeccc
Q psy6341 272 -----SLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYVR----NKVWKQPKLS---------RNDTLIFVPI 333 (465)
Q Consensus 272 -----~lL~~~~~~~~~~~~~~iv~~IKE~lCyVs~Dy~~el~~~~~----~~~~~l~~l~---------~~~eilF~P~ 333 (465)
++|..+++++....+..++++|||++|||+.||.+++++... ...|.+|+.. ..+|+||+|.
T Consensus 186 t~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lpdg~~i~i~~erf~~~E~lf~p~ 265 (375)
T 2fxu_A 186 TDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPS 265 (375)
T ss_dssp HHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECTTSCEEEESTHHHHHHHTTTCGG
T ss_pred HHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECCCCCEEEEChhheechHhhCCCc
Confidence 555566777766667899999999999999999999876542 2345555422 1257899999
Q ss_pred cccc-CCcccHHHHHHHHHHhcccChhHHHHhhhccCCccccccccceEEEeCCCCCC
Q psy6341 334 LLRS-LPKQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNSYSIVLTRPSAPR 390 (465)
Q Consensus 334 ~ig~-~~~~se~ia~~ike~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (465)
++|. ..+..+.+.++|.. +-.|++++ .+.+ ||||||++--
T Consensus 266 ~~~~~~~~i~~~i~~~i~~----~~~~~~~~----------l~~~---IvLtGG~s~~ 306 (375)
T 2fxu_A 266 FIGMESAGIHETTYNSIMK----CDIDIRKD----------LYAN---NVMSGGTTMY 306 (375)
T ss_dssp GGTCCSCCHHHHHHHHHHT----SCHHHHHH----------HHTC---EEEESGGGCS
T ss_pred cCCCCCCCHHHHHHHHHHh----CCHHHHHH----------HHhC---cEeeCCCCCC
Confidence 9887 45555555555553 34455433 3466 9999998753
No 12
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.71 E-value=4.1e-18 Score=176.72 Aligned_cols=160 Identities=54% Similarity=0.781 Sum_probs=118.6
Q ss_pred cccccchhhhhhccCcceEEeechhhhhhhcccccCC-ccCCceeEEEEEcCCCeeEEeec-------------------
Q psy6341 212 DCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRP-IEERTLTGIVVDSGDGVTHVIPV------------------- 271 (465)
Q Consensus 212 d~ve~~~EllFE~f~vpsl~~~~~avLslya~~~~~~-~~~g~~tgLVVD~G~s~T~VvPV------------------- 271 (465)
..+++|.|++||.||+|++++.+++++|+|+...... ...++ +|+|||+|+++|+|+||
T Consensus 121 ~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~ 199 (418)
T 1k8k_A 121 ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 199 (418)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHH
Confidence 4568999999999999999999999999998321000 00155 89999999999999999
Q ss_pred ------hhhhhcCCCCCCcCcHHHHHHHHHhcccccccHHHHHHHhhc-----cccccCCCCCC--------------CC
Q psy6341 272 ------SLLREREIGIPPEQSLETAKAIKERYSYICPDIAKEFAKYVR-----NKVWKQPKLSR--------------ND 326 (465)
Q Consensus 272 ------~lL~~~~~~~~~~~~~~iv~~IKE~lCyVs~Dy~~el~~~~~-----~~~~~l~~l~~--------------~~ 326 (465)
++|.+++..+....+..++++|||++|||+.|+.+++++... ...|.+|+... .+
T Consensus 200 lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~ 279 (418)
T 1k8k_A 200 ITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGP 279 (418)
T ss_dssp HHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccHHHHHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCc
Confidence 556667777766678899999999999999999999876532 13466666541 15
Q ss_pred eEEecccccccC--CcccHHHHHHHHHHhcccChhHHHHhhhccCCccccccccceEEEeCCCCC
Q psy6341 327 TLIFVPILLRSL--PKQSLETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNSYSIVLTRPSAP 389 (465)
Q Consensus 327 eilF~P~~ig~~--~~~se~ia~~ike~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (465)
|+||+|.+++.+ .+..+.+.++|.. +-.|++ .+.+.+ ||||||++-
T Consensus 280 E~lF~P~~~~~~~~~~i~~~i~~si~~----~~~~~~----------~~l~~~---IvL~GG~s~ 327 (418)
T 1k8k_A 280 EIFFHPEFANPDFTQPISEVVDEVIQN----CPIDVR----------RPLYKN---IVLSGGSTM 327 (418)
T ss_dssp HTTTCGGGTCTTCCCCHHHHHHHHHHH----SCGGGT----------THHHHC---EEEESGGGC
T ss_pred HhhCCCccCCCCCCCCHHHHHHHHHHc----CCHHHH----------HHHHhc---eEEeCCccc
Confidence 889999998864 3555666666654 233322 234567 999999875
No 13
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=99.67 E-value=5.4e-18 Score=183.10 Aligned_cols=183 Identities=15% Similarity=0.153 Sum_probs=127.4
Q ss_pred HHHHHHHHhCCC-----CCCCcchHHHHHHhhhhcccc-cCChHHHHhhccCCCCcceeeEecCCCCCCCCCCCCCCCCc
Q psy6341 2 KWILSLLREREI-----GIPPEQSLETAKAIKERYSYI-CPDIAKEFAKYDADPGKWMRNLFYSPTSWKKSPSDRPSIPF 75 (465)
Q Consensus 2 ~yL~~lL~~rg~-----~~~~~~e~~iv~~IKE~~CyV-s~d~~~e~~~~~~~~~~~~~~y~LP~~~~~~DG~~~~~~~~ 75 (465)
+||+++|.++|+ ++.+..+.++|++|||++||| +.|+... ........| ++ ..+ .
T Consensus 309 ~yL~kLL~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~Di~~q---------~~~f~~r~P------~~---~~~-k 369 (655)
T 4am6_A 309 RLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVAVQ---------LYNFMNRSP------NQ---PTE-K 369 (655)
T ss_dssp HHHHHHHHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGGCCSE---------EEEEEECCS------SS---CEE-E
T ss_pred HHHHHHHHHcCCCccccCCCCcchHHHHHHHHHheEEEcccchhhh---------hhcceeccC------CC---CCc-c
Confidence 699999999997 677778899999999999999 4554210 011112234 22 000 1
Q ss_pred eEEEecccccc-cc-CCCCCC-----------------------------------------------------------
Q psy6341 76 FTQNFQFKSFL-FS-FSNPDF----------------------------------------------------------- 94 (465)
Q Consensus 76 ~~I~l~~Erf~-PE-l~~~~~----------------------------------------------------------- 94 (465)
+.+.+|.|||+ || ||.|+.
T Consensus 370 y~i~vgdErflaPe~lF~Pei~~~~~~~~~~~~~~~~~~~~s~d~y~~~~nd~~S~~q~~~~~~~~~~~~~~~~~~~~~~ 449 (655)
T 4am6_A 370 YEFKLFDEVMLAPLALFFPQIFKLIRTSSHKNSSLEFQLPESRDLFTNELNDWNSLSQFESKEGNLYCDLNDDLKILNRI 449 (655)
T ss_dssp EEEEESSHHHHHHHGGGSTHHHHHTSCCCCCCHHHHTTSCCCBCTTTCCBCSCCCHHHHHHHTTCCGGGCCSHHHHHHHH
T ss_pred eEEEECCeehhCchhcCChhhcccccccccccchhhhhcCccccccCCCCCCccchhHHhhhccccCCCCccHhhhhhhh
Confidence 67888999988 55 332210
Q ss_pred ------------------------CCchhhhhhcccc-cCC-ccccc--ccccceEEecccccccchHHHHHHhhhhhhh
Q psy6341 95 ------------------------TTPISEIVDTVIQ-NCP-IDVRR--PLYHNIVLSGGSTMFRDFGRRLQRDIKRVVD 146 (465)
Q Consensus 95 ------------------------~~gL~elI~~sI~-~c~-~d~R~--~L~~NIVLsGGsSl~~Gf~eRL~~EL~~l~p 146 (465)
..+|..+|.+||. .|. .|.++ +||+||+++||++++|||.--|...|....|
T Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri~i~rp 529 (655)
T 4am6_A 450 LDAHNIIDQLQDKPENYGNTLKENFAPLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRINIWRP 529 (655)
T ss_dssp HHHHHHHHHHHTSSCSCSCSSCCCCCCHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHHHHHSC
T ss_pred hcccccccccccCCcccccccccccccHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHHHhhCc
Confidence 1377788999997 453 47777 9999999999999999998877766655222
Q ss_pred h---------hhhh-----------------------------------------------hccccCccceeeeeecccc
Q psy6341 147 A---------RLKL-----------------------------------------------SETLSGGYIKVTEVSRKFQ 170 (465)
Q Consensus 147 ~---------~~~~-----------------------------------------------~~~~~~~~~~v~v~~~~~r 170 (465)
. -+++ ...-.+..++++|+++|.+
T Consensus 530 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~V~~~p~~ 609 (655)
T 4am6_A 530 SLLSSASFPQFYKKLTKEIKDLEGHYVNAPDKTEDENKQILQAQIKEKIVEELEEQHQNIEHQNGNEHIFPVSIIPPPRD 609 (655)
T ss_dssp STTTBTTHHHHHHHHHHHHHHHHSTTCSCCSSSCCSSTTSTTHHHHHHHHHHHHHHHHHHHHTTSCCCBCCCCEECCCTT
T ss_pred ccccccccHHHHHHHHHhhhhhhhhhccccccccccchhhhhhhhhhhhhhhhhhhhhhhhhccccCCceeeEEeCCccc
Confidence 1 0011 0001123456888888755
Q ss_pred --cceeeeecccccCCcccccceEEEeeeecccCC
Q psy6341 171 --GRRLHWYGHVERRDESYIGKRVERMEVRGRKGR 203 (465)
Q Consensus 171 --~~~~aWiGgSilAsl~~~~~~~vtke~y~k~g~ 203 (465)
+++++|+|||++|+++.|+.+|+++++|.+.|.
T Consensus 610 ~d~~~~~W~GgSvla~l~~f~e~wIt~~Eyde~G~ 644 (655)
T 4am6_A 610 MNPALIIWKGASVLAQIKLVEELFITNSDWDVHGS 644 (655)
T ss_dssp SCGGGHHHHHHHHHTTSHHHHHHCEEHHHHHHHGG
T ss_pred cCcceeEEecceeeeecccHhheeecHHHHhhhcc
Confidence 378899999999999999999999999987663
No 14
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=99.59 E-value=6.4e-16 Score=167.03 Aligned_cols=120 Identities=14% Similarity=0.268 Sum_probs=92.2
Q ss_pred ccccccchhhhhhccCcceEEeechhhhhhhcccccCCccCC-ceeEEEEEcCCCeeEEeec------------------
Q psy6341 211 KDCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEER-TLTGIVVDSGDGVTHVIPV------------------ 271 (465)
Q Consensus 211 ~d~ve~~~EllFE~f~vpsl~~~~~avLslya~~~~~~~~~g-~~tgLVVD~G~s~T~VvPV------------------ 271 (465)
+..+++|+|+|||+||||++|++.+++||+|++ | +++|+|||+|+++|||+||
T Consensus 234 ~~~REkm~EIlFE~fgvpavyl~~qavlAlyas--------Gl~ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~ 305 (655)
T 4am6_A 234 KSHVETFIRVLLTELQFQAVAIIQESLATCYGA--------GISTSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGD 305 (655)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHS--------CCSSCEEEEEECSSCEEEEEEETTEECGGGCEEESCCHH
T ss_pred HHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhC--------CCCCceEEEcCCCceEEEEEEeCCEEEhhheeeecchHH
Confidence 455699999999999999999999999999999 8 6999999999999999999
Q ss_pred -------hhhhhcCC-----CCCCcCcHHHHHHHHHhcccc-cccHHHHHHHh-hc-----cccccCCCCC---CCCeEE
Q psy6341 272 -------SLLREREI-----GIPPEQSLETAKAIKERYSYI-CPDIAKEFAKY-VR-----NKVWKQPKLS---RNDTLI 329 (465)
Q Consensus 272 -------~lL~~~~~-----~~~~~~~~~iv~~IKE~lCyV-s~Dy~~el~~~-~~-----~~~~~l~~l~---~~~eil 329 (465)
++|.++++ ++++..+.+++++|||++||| +.|+...+..+ .. ...|+.-.+. -.|++|
T Consensus 306 dLT~yL~kLL~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~Di~~q~~~f~~r~P~~~~~ky~i~vgdErflaPe~l 385 (655)
T 4am6_A 306 DITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVAVQLYNFMNRSPNQPTEKYEFKLFDEVMLAPLAL 385 (655)
T ss_dssp HHHHHHHHHHHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGGCCSEEEEEEECCSSSCEEEEEEEESSHHHHHHHGG
T ss_pred HHHHHHHHHHHHcCCCccccCCCCcchHHHHHHHHHheEEEcccchhhhhhcceeccCCCCCcceEEEECCeehhCchhc
Confidence 67777765 577788999999999999999 56652111000 00 0112111111 349999
Q ss_pred ecccccccC
Q psy6341 330 FVPILLRSL 338 (465)
Q Consensus 330 F~P~~ig~~ 338 (465)
|+|.++++.
T Consensus 386 F~Pei~~~~ 394 (655)
T 4am6_A 386 FFPQIFKLI 394 (655)
T ss_dssp GSTHHHHHT
T ss_pred CChhhcccc
Confidence 999998873
No 15
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=98.45 E-value=1.9e-08 Score=100.99 Aligned_cols=131 Identities=16% Similarity=0.109 Sum_probs=89.3
Q ss_pred HHHHHHhhhhcccccCChHHHHhhccCCCCcceeeEecCCCCCCCCCCCCCCCCceEEEeccccccccCCCCCCCCchhh
Q psy6341 21 LETAKAIKERYSYICPDIAKEFAKYDADPGKWMRNLFYSPTSWKKSPSDRPSIPFFTQNFQFKSFLFSFSNPDFTTPISE 100 (465)
Q Consensus 21 ~~iv~~IKE~~CyVs~d~~~e~~~~~~~~~~~~~~y~LP~~~~~~DG~~~~~~~~~~I~l~~Erf~PEl~~~~~~~gL~e 100 (465)
.+.++++|+++|++..+...+- ..+.++.. ...+| . ...+.++.++|. +++.+. ..++.+
T Consensus 200 ~~~ae~~K~~l~~~~~~~~~~~-----------~~~~~~~~-~~~~g-----~-~~~~~i~~~~~~-~~~~~~-~~~i~~ 259 (344)
T 1jce_A 200 ERTAERVKIEIGNVFPSKENDE-----------LETTVSGI-DLSTG-----L-PRKLTLKGGEVR-EALRSV-VVAIVE 259 (344)
T ss_dssp HHHHHHHHHHHCBCSCCHHHHH-----------CEEEEEEE-ETTTT-----E-EEEEEEEHHHHH-HHTHHH-HHHHHH
T ss_pred HHHHHHHHHHHhccCccccCCc-----------ceEEEecc-ccCCC-----C-ceeEEEeHHHHH-HHHHHH-HHHHHH
Confidence 5789999999999876543220 11222200 00034 0 036777877776 222222 347899
Q ss_pred hhhcccccCCcccccccc-cceEEecccccccchHHHHHHhhhhhhhhhhhhhccccCccceeeeeecccccceeeeecc
Q psy6341 101 IVDTVIQNCPIDVRRPLY-HNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIKVTEVSRKFQGRRLHWYGH 179 (465)
Q Consensus 101 lI~~sI~~c~~d~R~~L~-~NIVLsGGsSl~~Gf~eRL~~EL~~l~p~~~~~~~~~~~~~~~v~v~~~~~r~~~~aWiGg 179 (465)
+|.++|.+++.+++.+++ ++|+|+||+|.+|||.++|++++.. ++.+ ..++ .+++|+|+
T Consensus 260 ~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~-----------------~v~~--~~~p-~~ava~Ga 319 (344)
T 1jce_A 260 SVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGI-----------------SVIR--SEEP-LTAVAKGA 319 (344)
T ss_dssp HHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSS-----------------CEEE--CSST-TTHHHHHH
T ss_pred HHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCC-----------------Cccc--cCCh-HHHHHHHH
Confidence 999999999988888888 7999999999999999999988842 1222 2233 78999999
Q ss_pred cccCC-cccccce
Q psy6341 180 VERRD-ESYIGKR 191 (465)
Q Consensus 180 SilAs-l~~~~~~ 191 (465)
++++. ++.++++
T Consensus 320 a~~a~~~~~~~~~ 332 (344)
T 1jce_A 320 GMVLDKVNILKKL 332 (344)
T ss_dssp HHGGGCHHHHTTS
T ss_pred HHHHhChHHHHHh
Confidence 99997 4666554
No 16
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=97.92 E-value=2.4e-05 Score=78.23 Aligned_cols=84 Identities=20% Similarity=0.193 Sum_probs=61.4
Q ss_pred ccchhhhhhccCcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeec-----------------------
Q psy6341 215 NQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPV----------------------- 271 (465)
Q Consensus 215 e~~~EllFE~f~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV----------------------- 271 (465)
+.+.+ +||.+|++.+.+...++.++++..... ....+.+|||+|+++|+++++
T Consensus 112 ~~~~~-a~~~aG~~~~~li~ep~Aaa~~~~~~~---~~~~~~lVvDiGggttdvsv~~~~~~~~~~~~~lGG~~id~~l~ 187 (344)
T 1jce_A 112 RAILD-AGLEAGASKVFLIEEPMAAAIGSNLNV---EEPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEAIV 187 (344)
T ss_dssp HHHHH-HHHHTTCSEEEEEEHHHHHHHHTTCCT---TSSSCEEEEEECSSCEEEEEEETTEEEEEEEESCSHHHHHHHHH
T ss_pred HHHHH-HHHHcCCCeEeccCCHHHHHHhcCCCC---CCCceEEEEEeCCCeEEEEEEEcCCEEeeCCCCccChhHHHHHH
Confidence 45555 689999999999999999998872211 123689999999999999998
Q ss_pred hhhhhcCCCCCCcCcHHHHHHHHHhcccccccHH
Q psy6341 272 SLLREREIGIPPEQSLETAKAIKERYSYICPDIA 305 (465)
Q Consensus 272 ~lL~~~~~~~~~~~~~~iv~~IKE~lCyVs~Dy~ 305 (465)
++|.+++ ........++++|+++|++..++.
T Consensus 188 ~~l~~~~---~~~~~~~~ae~~K~~l~~~~~~~~ 218 (344)
T 1jce_A 188 QYVRETY---RVAIGERTAERVKIEIGNVFPSKE 218 (344)
T ss_dssp HHHHHHH---CEECCHHHHHHHHHHHCBCSCCHH
T ss_pred HHHHHHh---CcccCHHHHHHHHHHHhccCcccc
Confidence 2222221 112356789999999999876653
No 17
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=97.84 E-value=4e-05 Score=73.85 Aligned_cols=50 Identities=22% Similarity=0.203 Sum_probs=45.0
Q ss_pred cccchhhhhhccCcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeec
Q psy6341 214 VNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPV 271 (465)
Q Consensus 214 ve~~~EllFE~f~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV 271 (465)
.++..+.+||.+|++...+...+..++++. +...++|||+|+++|.++++
T Consensus 107 ~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~--------~~~~~~viDiGggst~~~~~ 156 (272)
T 3h1q_A 107 NAEACGHVVAGAGLELVTLVDEPVAAARAL--------GINDGIVVDIGGGTTGIAVI 156 (272)
T ss_dssp CTTHHHHHHHHTTCEEEEEECHHHHHHHHH--------TCSSEEEEEECSSCEEEEEE
T ss_pred HHHHHHHHHHHcCCeeeecccHHHHHHHHH--------cCCCEEEEEECCCcEEEEEE
Confidence 345677799999999999999999999988 77789999999999999988
No 18
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=96.74 E-value=0.00034 Score=70.78 Aligned_cols=84 Identities=10% Similarity=0.069 Sum_probs=60.1
Q ss_pred EEEeccccccccCCCCCCCCchhhhhhcccccCCcccccccccceEEecccccccchHHHHHHhhhhhhhhhhhhhcccc
Q psy6341 77 TQNFQFKSFLFSFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLS 156 (465)
Q Consensus 77 ~I~l~~Erf~PEl~~~~~~~gL~elI~~sI~~c~~d~R~~L~~NIVLsGGsSl~~Gf~eRL~~EL~~l~p~~~~~~~~~~ 156 (465)
.+.++.+.|. +++.+. ...+.++|.++|.++.. .....++|+|+||+|.+||+.++|++++...
T Consensus 297 ~~~it~~~~~-~~~~~~-~~~i~~~i~~~l~~~~~--~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~------------ 360 (383)
T 1dkg_D 297 NIKVTRAKLE-SLVEDL-VNRSIELLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGKE------------ 360 (383)
T ss_dssp EEEEEHHHHH-HHSHHH-HHHHHHHHHHHHHTTTC--CTTTCCEEEEESGGGGSHHHHHHHHHHHSSC------------
T ss_pred EEEEeHHHHH-HHHHHH-HHHHHHHHHHHHHHcCC--CHhhCCEEEEecCccccHHHHHHHHHHhCCC------------
Confidence 4567777665 222222 24688888898988863 4566799999999999999999999887421
Q ss_pred CccceeeeeecccccceeeeecccccCC
Q psy6341 157 GGYIKVTEVSRKFQGRRLHWYGHVERRD 184 (465)
Q Consensus 157 ~~~~~v~v~~~~~r~~~~aWiGgSilAs 184 (465)
+ ....++ ..++|+|++++|.
T Consensus 361 -----v--~~~~~p-~~ava~Gaa~~a~ 380 (383)
T 1dkg_D 361 -----P--RKDVNP-DEAVAIGAAVQGG 380 (383)
T ss_dssp -----C--BCSSCT-TTHHHHHHHHHTT
T ss_pred -----C--CCCcCh-HHHHHHHHHHHHH
Confidence 1 122233 7899999999886
No 19
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=96.51 E-value=0.0007 Score=65.00 Aligned_cols=61 Identities=18% Similarity=0.204 Sum_probs=43.3
Q ss_pred chhhhhhcccccCCcccccccccceEEecccccccchHHHHHHhhhhhhhhhhhhhccccCccceeeeeecccccceeee
Q psy6341 97 PISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIKVTEVSRKFQGRRLHW 176 (465)
Q Consensus 97 gL~elI~~sI~~c~~d~R~~L~~NIVLsGGsSl~~Gf~eRL~~EL~~l~p~~~~~~~~~~~~~~~v~v~~~~~r~~~~aW 176 (465)
++.+.+.++|.+++ ...+|+|+||++.+|||.++|++++.. ++.. +.+. .++.|
T Consensus 212 ~i~~~i~~~l~~~~------~~~~ivL~GG~a~~~~l~~~l~~~l~~-----------------~v~~--~~~p-~~a~a 265 (272)
T 3h1q_A 212 KMALIVKEVIKNYD------QTLPVYVVGGTAYLTGFSEEFSRFLGK-----------------EVQV--PIHP-LLVTP 265 (272)
T ss_dssp HHHHHHHHHTTTSC------SSCCEEEESGGGGSTTHHHHHHHHHSS-----------------CCBC--CSSG-GGHHH
T ss_pred HHHHHHHHHHHhcC------CCCEEEEECCccchhhHHHHHHHHhCC-----------------Cccc--cCCh-HHHHH
Confidence 45555566666654 245999999999999999999988843 1111 2222 78999
Q ss_pred ecccccC
Q psy6341 177 YGHVERR 183 (465)
Q Consensus 177 iGgSilA 183 (465)
+|++++|
T Consensus 266 ~Gaal~a 272 (272)
T 3h1q_A 266 LGIALFG 272 (272)
T ss_dssp HHHHTTC
T ss_pred HHHHhcC
Confidence 9999865
No 20
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=96.00 E-value=0.0012 Score=66.71 Aligned_cols=68 Identities=21% Similarity=0.225 Sum_probs=50.5
Q ss_pred CchhhhhhcccccCCcccccccccceEEecccccccchHHHHHHhhhhhhhhhhhhhccccCccceeeeeecccccceee
Q psy6341 96 TPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLSGGYIKVTEVSRKFQGRRLH 175 (465)
Q Consensus 96 ~gL~elI~~sI~~c~~d~R~~L~~NIVLsGGsSl~~Gf~eRL~~EL~~l~p~~~~~~~~~~~~~~~v~v~~~~~r~~~~a 175 (465)
..+.++|.++|.++..+ ....++|+|+||+|.+|++.++|++++... ++ ....+. ..++
T Consensus 324 ~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~----------------~v--~~~~~p-~~av 382 (394)
T 3qfu_A 324 KKTLKPVEKVLQDSGLE--KKDVDDIVLVGGSTRIPKVQQLLESYFDGK----------------KA--SKGINP-DEAV 382 (394)
T ss_dssp HHTHHHHHHHHHHHTCC--GGGCCEEEEESGGGGSHHHHHHHHHHTTTC----------------CC--BCCSCT-TTHH
T ss_pred HHHHHHHHHHHHHcCCC--HHHCCEEEEECCccccHHHHHHHHHHcCCC----------------CC--CCCcCH-HHHH
Confidence 35777888888877655 556699999999999999999999877321 11 222223 7889
Q ss_pred eecccccCC
Q psy6341 176 WYGHVERRD 184 (465)
Q Consensus 176 WiGgSilAs 184 (465)
|+|++++|.
T Consensus 383 a~Gaa~~a~ 391 (394)
T 3qfu_A 383 AYGAAVQAG 391 (394)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998874
No 21
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=95.94 E-value=0.011 Score=59.27 Aligned_cols=76 Identities=16% Similarity=0.171 Sum_probs=47.7
Q ss_pred hhhccCcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeec-------------------hhhhhcCCCC
Q psy6341 221 MFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPV-------------------SLLREREIGI 281 (465)
Q Consensus 221 lFE~f~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV-------------------~lL~~~~~~~ 281 (465)
++|..|+.-..+...++.++++...... .......+|||+|+++|+++.+ +.+.+. ..
T Consensus 159 ~~~~aGl~~~~i~~ep~Aaa~~~~~~~~-~~~~~~~~vvDiGggttdi~i~~~g~~~~~~~~~~GG~~i~~~i~~~-~~- 235 (377)
T 2ych_A 159 ALRGAGLVPVVLDVKPFAGLYPLEARLA-EEPDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIARS-FN- 235 (377)
T ss_dssp HHHHTTCEEEEEEEHHHHTTGGGHHHHH-TSTTCEEEEEEECSSCEEEEEEETTEEEEEEEESCSHHHHHHHHHHH-TT-
T ss_pred HHHHCCCceEEEecchHHHHHHHHhhcc-cccCCeEEEEEECCCcEEEEEEECCEEEEEEeeechHHHHHHHHHHH-hC-
Confidence 5688899999999999888776410000 0012346999999999999988 111111 11
Q ss_pred CCcCcHHHHHHHHHhcccccc
Q psy6341 282 PPEQSLETAKAIKERYSYICP 302 (465)
Q Consensus 282 ~~~~~~~iv~~IKE~lCyVs~ 302 (465)
.....++++|++++++..
T Consensus 236 ---~~~~~aE~~K~~~~~~~~ 253 (377)
T 2ych_A 236 ---LDLLAAEEVKRTYGMATL 253 (377)
T ss_dssp ---CCHHHHHHHHHHTC----
T ss_pred ---CCHHHHHHHHhhcccccc
Confidence 235678889988887654
No 22
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=95.65 E-value=0.028 Score=56.48 Aligned_cols=54 Identities=15% Similarity=-0.020 Sum_probs=40.6
Q ss_pred ccchhhhhhccCcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeec
Q psy6341 215 NQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPV 271 (465)
Q Consensus 215 e~~~EllFE~f~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV 271 (465)
+.+.+ .+|..|++.+.+...++.++++...... ....+.+|||+|+++|+++.+
T Consensus 152 ~~~~~-a~~~aGl~~~~li~Ep~Aaa~~~~~~~~--~~~~~~lVvD~Gggttdvsv~ 205 (383)
T 1dkg_D 152 QATKD-AGRIAGLEVKRIINEPTAAALAYGLDKG--TGNRTIAVYDLGGGTFDISII 205 (383)
T ss_dssp HHHHH-HHHHTTCEESCCCBHHHHHHHHHTCCC---CCEEEEEEEEECSSCEEEEEE
T ss_pred HHHHH-HHHHcCCceEEEeccHHHHHHHHHhccC--CCCcEEEEEEcCCCeEEEEEE
Confidence 45555 4688999999999999999886622111 123589999999999999866
No 23
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=95.44 E-value=0.031 Score=58.99 Aligned_cols=53 Identities=19% Similarity=0.034 Sum_probs=41.0
Q ss_pred ccchhhhhhccCcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeec
Q psy6341 215 NQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPV 271 (465)
Q Consensus 215 e~~~EllFE~f~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV 271 (465)
+.|.+ .++..|++.+.+.+.++.|++++.... ....+.+|+|+|+++|+++.+
T Consensus 126 ~a~~~-a~~~AGl~~~~li~Ep~AAAlay~~~~---~~~~~vlV~D~GgGT~Dvsv~ 178 (509)
T 2v7y_A 126 QATKD-AGRIAGLEVERIINEPTAAALAYGLDK---EEDQTILVYDLGGGTFDVSIL 178 (509)
T ss_dssp HHHHH-HHHHTTCEEEEEEEHHHHHHHHTTGGG---SCSEEEEEEEECSSCEEEEEE
T ss_pred HHHHH-HHHHcCCCeEEEecCHHHHHHHHhhcc---CCCCEEEEEECCCCeEEEEEE
Confidence 44555 468899999999999999988762211 123689999999999999876
No 24
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=95.28 E-value=0.0033 Score=66.58 Aligned_cols=84 Identities=13% Similarity=0.121 Sum_probs=57.7
Q ss_pred EEEeccccccccCCCCCCCCchhhhhhcccccCCcccccccccceEEecccccccchHHHHHHhhhhhhhhhhhhhcccc
Q psy6341 77 TQNFQFKSFLFSFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLS 156 (465)
Q Consensus 77 ~I~l~~Erf~PEl~~~~~~~gL~elI~~sI~~c~~d~R~~L~~NIVLsGGsSl~~Gf~eRL~~EL~~l~p~~~~~~~~~~ 156 (465)
.+.|+.+.|. +++.+- ...+.+.|.++|..+. +.....++|+|+||+|.+|++.++|++++...
T Consensus 266 ~~~itr~~fe-~l~~~~-~~~i~~~i~~~L~~a~--~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~------------ 329 (509)
T 2v7y_A 266 EMTLTRAKFE-ELSAHL-VERTMGPVRQALQDAG--LTPADIDKVILVGGSTRIPAVQEAIKRELGKE------------ 329 (509)
T ss_dssp EEEEEHHHHH-HHTHHH-HHTTHHHHHHHHHHHT--CCGGGCSEEEEESGGGGCHHHHHHHHHHHSSC------------
T ss_pred EEEEEHHHHH-HHHHHH-HHHHHHHHHHHHHHcC--CChhHCcEEEEECCcccChHHHHHHHHHhCCC------------
Confidence 4566666665 222221 2357778888888775 34566799999999999999999999887421
Q ss_pred CccceeeeeecccccceeeeecccccCC
Q psy6341 157 GGYIKVTEVSRKFQGRRLHWYGHVERRD 184 (465)
Q Consensus 157 ~~~~~v~v~~~~~r~~~~aWiGgSilAs 184 (465)
+ ....++ ..++|+|++++|.
T Consensus 330 -----~--~~~~~p-~~aVa~Gaa~~a~ 349 (509)
T 2v7y_A 330 -----P--HKGVNP-DEVVAIGAAIQGG 349 (509)
T ss_dssp -----C--BCCSCT-TTHHHHHHHHHHH
T ss_pred -----c--CcCCCc-hhhhHhhHHHHHH
Confidence 1 112222 6789999998874
No 25
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=95.12 E-value=0.064 Score=55.44 Aligned_cols=155 Identities=14% Similarity=0.042 Sum_probs=76.0
Q ss_pred hhhccCcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeec---hhhhhcCCCCCCcCcHHHHHHHHHhc
Q psy6341 221 MFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPV---SLLREREIGIPPEQSLETAKAIKERY 297 (465)
Q Consensus 221 lFE~f~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV---~lL~~~~~~~~~~~~~~iv~~IKE~l 297 (465)
++|.-|+.-..+...++.+.++..... ......+|||+|+++|.+.-+ .+...+.. ......+.++|-+.+
T Consensus 176 ~~~~AGL~v~~lv~ep~Aaa~a~l~~~---~~~~gv~vvDiGggttdisi~~~g~~~~~~~i---~~GG~~it~dIa~~l 249 (419)
T 4a2a_A 176 FLQDTVKSPFQLKSSLVSTAEGVLTTP---EKDRGVVVVNLGYNFTGLIAYKNGVPIKISYV---PVGMKHVIKDVSAVL 249 (419)
T ss_dssp HHHTTSCSCEEEEEHHHHHHHHHCCHH---HHHHCEEEEEECSSSEEEEEEETTEEEEEEEE---SCCHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEEEEHHHHHHHHhhccc---cccCCEEEEEECCCcEEEEEEECCEEEEEEec---ccHHHHHHHHHHHHH
Confidence 466778877788888888777652110 012468999999999999866 11100000 011223333333221
Q ss_pred ccccccHHHHHHHhhccccccCCCCCCCCeEEeccccccc--CCcccHHHHHHHHHHhcccChhHHHHhhhccCC-c---
Q psy6341 298 SYICPDIAKEFAKYVRNKVWKQPKLSRNDTLIFVPILLRS--LPKQSLETAKAIKERYSYICPDIAKEFAKYDAD-P--- 371 (465)
Q Consensus 298 CyVs~Dy~~el~~~~~~~~~~l~~l~~~~eilF~P~~ig~--~~~~se~ia~~ike~~~~~~~D~~~~~~~~~~~-~--- 371 (465)
-++.+-.+.++..-.. ..+.. +..+.+..|...|. ..-..+++.+.+......+..-+.+.+..+.-. |
T Consensus 250 -~~~~~~AE~iK~~~g~---a~~~~-~~~~~i~v~~~~~~~~~~is~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~ 324 (419)
T 4a2a_A 250 -DTSFEESERLIITHGN---AVYND-LKEEEIQYRGLDGNTIKTTTAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEG 324 (419)
T ss_dssp -TCCHHHHHHHHHHHCC---SCCTT-CCCCEEEEECTTSCSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC----
T ss_pred -CCCHHHHHHHHHHhcc---CcccC-CCCceEEEeecCCccceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccc
Confidence 1111111112211100 01111 22333444444332 112334666666666666776677777665432 1
Q ss_pred -cccccccceEEEeCCCCC
Q psy6341 372 -GKWMRNSYSIVLTRPSAP 389 (465)
Q Consensus 372 -~~~~~~~~~~~~~~~~~~ 389 (465)
..-... ||||||+|-
T Consensus 325 ~~~~~~~---IvLtGG~s~ 340 (419)
T 4a2a_A 325 EIGIPGG---VVLTGGGAK 340 (419)
T ss_dssp ----TTC---EEEESGGGG
T ss_pred ccccCCE---EEEECchhc
Confidence 223455 999999984
No 26
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=94.31 E-value=0.1 Score=52.27 Aligned_cols=52 Identities=19% Similarity=0.052 Sum_probs=38.7
Q ss_pred hhhhhhccCcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeec
Q psy6341 218 LEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPV 271 (465)
Q Consensus 218 ~EllFE~f~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV 271 (465)
..-.++..|++.+.+...++.++++...... ......+|||+|.++|.+.-+
T Consensus 172 ~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~--~~~~~vlV~D~Gggt~dvsv~ 223 (394)
T 3qfu_A 172 TKDAGTIAGLNVLRIVNEPTAAAIAYGLDKS--DKEHQIIVYDLGGGTFDVSLL 223 (394)
T ss_dssp HHHHHHHTTCEEEEEEEHHHHHHHHTTTTSC--SSCEEEEEEEECSSCEEEEEE
T ss_pred HHHHHHHcCCceEEEecCHHHHHHHHhhccC--CCCceEEEEEcCCCceeEEEE
Confidence 3344588999999999999999887622111 123567999999999988765
No 27
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=94.17 E-value=0.0089 Score=60.66 Aligned_cols=85 Identities=18% Similarity=0.173 Sum_probs=54.7
Q ss_pred EEEeccccccccCCCCCCCCchhhhhhcccccCCcccccccccceEEecccccccchHHHHHHhhhhhhhhhhhhhcccc
Q psy6341 77 TQNFQFKSFLFSFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLS 156 (465)
Q Consensus 77 ~I~l~~Erf~PEl~~~~~~~gL~elI~~sI~~c~~d~R~~L~~NIVLsGGsSl~~Gf~eRL~~EL~~l~p~~~~~~~~~~ 156 (465)
.+.++.+.|. +++.+. ...+.++|.++|..+..+ ....+.|+|+||+|.+|++.++|++.+...
T Consensus 315 ~~~i~r~~~~-~~~~~~-~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~------------ 378 (404)
T 3i33_A 315 YTSITRARFE-ELNADL-FRGTLEPVEKALRDAKLD--KGQIQEIVLVGGSTRIPKIQKLLQDFFNGK------------ 378 (404)
T ss_dssp EEEEEHHHHH-HHTHHH-HHHTHHHHHHHHHHHTCC--GGGCCEEEEESGGGGCHHHHHHHHHHTTTC------------
T ss_pred EEEEcHHHHH-HHHHHH-HHHHHHHHHHHHHHcCCC--HhhCCEEEEECCccccHHHHHHHHHHcCCC------------
Confidence 3444555444 122222 235667777777765433 455689999999999999999999877321
Q ss_pred CccceeeeeecccccceeeeecccccCC
Q psy6341 157 GGYIKVTEVSRKFQGRRLHWYGHVERRD 184 (465)
Q Consensus 157 ~~~~~v~v~~~~~r~~~~aWiGgSilAs 184 (465)
++ ....+. ..++++|++++|.
T Consensus 379 ----~v--~~~~~p-~~ava~Gaa~~a~ 399 (404)
T 3i33_A 379 ----EL--NKSINP-DEAVAYGAAVQAA 399 (404)
T ss_dssp ----CC--BCSSCT-TTHHHHHHHHHHH
T ss_pred ----CC--CCCcCH-HHHHHHHHHHHHH
Confidence 11 122223 6789999998874
No 28
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=93.45 E-value=0.12 Score=52.18 Aligned_cols=62 Identities=16% Similarity=0.016 Sum_probs=43.2
Q ss_pred cccccccchhhhhhccCcceEEeechhhhhhhcccccCCcc-CCceeEEEEEcCCCeeEEeec
Q psy6341 210 WKDCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIE-ERTLTGIVVDSGDGVTHVIPV 271 (465)
Q Consensus 210 W~d~ve~~~EllFE~f~vpsl~~~~~avLslya~~~~~~~~-~g~~tgLVVD~G~s~T~VvPV 271 (465)
|.+..++...-.++..|++.+.+...+..|+++........ ......+|||+|.++|.+.-+
T Consensus 169 ~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~ 231 (404)
T 3i33_A 169 FNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSIL 231 (404)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEE
Confidence 43333334444588899999999999999988763222110 023567999999999999866
No 29
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=91.54 E-value=0.073 Score=53.00 Aligned_cols=43 Identities=14% Similarity=0.063 Sum_probs=32.1
Q ss_pred cCcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeec
Q psy6341 225 FNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPV 271 (465)
Q Consensus 225 f~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV 271 (465)
+++..+.+.++++-++|..... ......+|||+|+++|.+.-+
T Consensus 147 i~I~~v~v~pe~~ga~~~~~~~----~~~~~v~vvDiGggTtd~~v~ 189 (329)
T 4apw_A 147 FEITDITIKAEGSGVLFLEQEN----FKNKNVAVIDFGGLNMGFSLY 189 (329)
T ss_dssp EEEEEEEEEEHHHHHHHHSCCC----CTTCEEEEEEECSSCEEEEEE
T ss_pred EEEeEEEEEeccHHHHhhcchh----hccCCEEEEEeCCCcEEEEEE
Confidence 3456788899988888765211 123577999999999999877
No 30
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=91.26 E-value=0.06 Score=53.92 Aligned_cols=47 Identities=13% Similarity=0.171 Sum_probs=36.8
Q ss_pred chhhhhhcccccCCcccccccccceEEecccccccchHHHHHHhhhh
Q psy6341 97 PISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKR 143 (465)
Q Consensus 97 gL~elI~~sI~~c~~d~R~~L~~NIVLsGGsSl~~Gf~eRL~~EL~~ 143 (465)
.+.+.|.++|..++...+....++|+|+||+|.+||+.++|.+++..
T Consensus 286 ~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~ 332 (377)
T 2ych_A 286 ELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGV 332 (377)
T ss_dssp HHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCC
Confidence 46667777777666666777899999999999999999999988853
No 31
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=90.79 E-value=0.27 Score=49.58 Aligned_cols=47 Identities=23% Similarity=0.104 Sum_probs=32.4
Q ss_pred cCcceEEeechhhhhhhcccccCCccC---CceeEEEEEcCCCeeEEeec
Q psy6341 225 FNVPGLYIAVQAVLALAASWKSRPIEE---RTLTGIVVDSGDGVTHVIPV 271 (465)
Q Consensus 225 f~vpsl~~~~~avLslya~~~~~~~~~---g~~tgLVVD~G~s~T~VvPV 271 (465)
+.|..+.+.++++-|+++......... ....-+|||+|+++|.+.-+
T Consensus 152 i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~ 201 (355)
T 3js6_A 152 INVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTY 201 (355)
T ss_dssp EEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEE
T ss_pred EEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEE
Confidence 445789999999999887521110000 13567999999999998765
No 32
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=90.66 E-value=0.68 Score=46.16 Aligned_cols=138 Identities=15% Similarity=0.178 Sum_probs=69.7
Q ss_pred CcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeechh-----hhhcCCCCCC---cCcHHHHHHHHHhc
Q psy6341 226 NVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPVSL-----LREREIGIPP---EQSLETAKAIKERY 297 (465)
Q Consensus 226 ~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV~l-----L~~~~~~~~~---~~~~~iv~~IKE~l 297 (465)
++..+.+.+++..|+++........+...+.+|||+|+++|.+.-+.+ .......... .....+++.+|+++
T Consensus 162 ~v~~v~li~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~~~ 241 (346)
T 2fsj_A 162 NITRLIMRPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKET 241 (346)
T ss_dssp EEEEEEEEETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHHHh
Confidence 456788889988887763100001011245699999999999987632 1111111111 12346777787776
Q ss_pred ccccccHHHH-HHHhhccccccCCCCCCCCeEEecccccccCCcccHHH-HHHHHHHhcccChhHHHHhhhccCCccccc
Q psy6341 298 SYICPDIAKE-FAKYVRNKVWKQPKLSRNDTLIFVPILLRSLPKQSLET-AKAIKERYSYICPDIAKEFAKYDADPGKWM 375 (465)
Q Consensus 298 CyVs~Dy~~e-l~~~~~~~~~~l~~l~~~~eilF~P~~ig~~~~~se~i-a~~ike~~~~~~~D~~~~~~~~~~~~~~~~ 375 (465)
.... +...+ ++ . +. .+.+. |.. -.++++ .+.+.+....+...+.+.+... .+-+
T Consensus 242 g~~~-~i~~~~~e---~----------~~-~~~~~----g~~-~~~~~i~~~~i~~~~~~i~~~i~~~l~~~----~~~i 297 (346)
T 2fsj_A 242 GFVV-PFDLAQEA---L----------SH-PVMFR----QKQ-VGGPEVSGPILEDLANRIIENIRLNLRGE----VDRV 297 (346)
T ss_dssp CCCC-CHHHHHHH---T----------TS-CEEET----TEE-ECSHHHHHHHHHHHHHHHHHHHHHHHGGG----GGGE
T ss_pred CCCc-CCCHHHHh---c----------CC-eEeEC----Ccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHhh----hhcc
Confidence 4321 22211 11 0 00 11111 111 114556 5556555444544444445432 1234
Q ss_pred cccceEEEeCCCCCC
Q psy6341 376 RNSYSIVLTRPSAPR 390 (465)
Q Consensus 376 ~~~~~~~~~~~~~~~ 390 (465)
.. ||||||+|.-
T Consensus 298 ~~---IvL~GGga~l 309 (346)
T 2fsj_A 298 TS---LIPVGGGSNL 309 (346)
T ss_dssp EE---EEEESTTHHH
T ss_pred cE---EEEECCcHHH
Confidence 66 9999999864
No 33
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=90.25 E-value=0.078 Score=57.29 Aligned_cols=61 Identities=11% Similarity=0.117 Sum_probs=41.8
Q ss_pred EEeccccccccCCCCCCCCchhhhhhcccccCCcccccccccceEEecccccccchHHHHHHhhh
Q psy6341 78 QNFQFKSFLFSFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIK 142 (465)
Q Consensus 78 I~l~~Erf~PEl~~~~~~~gL~elI~~sI~~c~~d~R~~L~~NIVLsGGsSl~~Gf~eRL~~EL~ 142 (465)
+.|+.+.|. +++.+- ...+.+.|.++|..+. +...-...|+|+||+|.+|++.++|.+.+.
T Consensus 298 ~~itr~~fe-~l~~~~-~~~i~~~i~~~L~~a~--~~~~~i~~VvLvGG~srip~v~~~l~~~fg 358 (605)
T 2kho_A 298 IKVTRAKLE-SLVEDL-VNRSIEPLKVALQDAG--LSVSDIDDVILVGGQTRMPMVQKKVAEFFG 358 (605)
T ss_dssp EEEEHHHHH-TTCCST-TGGGTSHHHHHHHTTT--CCTTTCSEEEEESGGGGSHHHHHHHHHHHS
T ss_pred EEEeHHHHH-HHHHHH-HHHHHHHHHHHHHHcC--CChhhCceEEEECCcccChHHHHHHHHhcC
Confidence 345555444 334443 3456677777777664 333455899999999999999999997773
No 34
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=89.70 E-value=0.076 Score=56.75 Aligned_cols=85 Identities=16% Similarity=0.178 Sum_probs=50.7
Q ss_pred EEEeccccccccCCCCCCCCchhhhhhcccccCCcccccccccceEEecccccccchHHHHHHhhhhhhhhhhhhhcccc
Q psy6341 77 TQNFQFKSFLFSFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKRVVDARLKLSETLS 156 (465)
Q Consensus 77 ~I~l~~Erf~PEl~~~~~~~gL~elI~~sI~~c~~d~R~~L~~NIVLsGGsSl~~Gf~eRL~~EL~~l~p~~~~~~~~~~ 156 (465)
.+.|..+.|. +++.+- ...+.+.|.++|..+. +...-.+.|+|+||+|.+|++.++|.+.+...
T Consensus 294 ~~~ltr~~~e-~l~~~~-~~~i~~~i~~~L~~a~--~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~------------ 357 (554)
T 1yuw_A 294 YTSITRARFE-ELNADL-FRGTLDPVEKALRDAK--LDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK------------ 357 (554)
T ss_dssp EEEEEHHHHH-HHTHHH-HHHTTHHHHHHHHHTT--CCGGGCCEEEEESGGGGCHHHHHHHHHHTTTC------------
T ss_pred EEEEEHHHHH-HHHHHH-HHHHHHHHHHHHHHcC--CChhhCcEEEEECCcccChHHHHHHHHHcCCC------------
Confidence 4556655554 111111 1234455566665542 33445689999999999999999999777421
Q ss_pred CccceeeeeecccccceeeeecccccCC
Q psy6341 157 GGYIKVTEVSRKFQGRRLHWYGHVERRD 184 (465)
Q Consensus 157 ~~~~~v~v~~~~~r~~~~aWiGgSilAs 184 (465)
++ ....+. ..+++.|+++.|.
T Consensus 358 ----~v--~~~~np-~~aVA~Gaa~~a~ 378 (554)
T 1yuw_A 358 ----EL--NKSINP-DEAVAYGAAVQAA 378 (554)
T ss_dssp ----CC--BCCSCT-TTHHHHHHHHHHH
T ss_pred ----cc--ccCCCc-hhHHHHHHHHHHH
Confidence 11 111122 5678888888763
No 35
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=89.22 E-value=1.5 Score=46.64 Aligned_cols=52 Identities=15% Similarity=0.029 Sum_probs=38.8
Q ss_pred hhhhhccCcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeec
Q psy6341 219 EIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPV 271 (465)
Q Consensus 219 EllFE~f~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV 271 (465)
.-.++..|+..+.+.+.+..|++++...... ......+|+|+|+++|.+.-+
T Consensus 159 ~~A~~~AGl~~~~li~EP~AAAlay~~~~~~-~~~~~vlV~D~GgGT~Dvsv~ 210 (554)
T 1yuw_A 159 KDAGTIAGLNVLRIINEPTAAAIAYGLDKKV-GAERNVLIFDLGGGTFDVSIL 210 (554)
T ss_dssp HHHHHTTTCEEEEEEEHHHHHHHHTTCSTTC-SSCEEEEEEEECSSCEEEEEE
T ss_pred HHHHHHcCCCeEEEeCcHHHHHHHHHhhccC-CCCcEEEEEEcCCCeEEEEEE
Confidence 3467888999999999998887765222110 124689999999999999866
No 36
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=80.93 E-value=3.3 Score=40.36 Aligned_cols=46 Identities=11% Similarity=0.197 Sum_probs=33.5
Q ss_pred hccCcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeec
Q psy6341 223 ESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPV 271 (465)
Q Consensus 223 E~f~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV 271 (465)
+.++|..+.+..+++.++++.... .......+|||+|+++|.+.-+
T Consensus 136 ~~~~i~~v~~~~e~~aa~~~~~~~---~~~~~~~~vvDiGggttd~~v~ 181 (320)
T 2zgy_A 136 DTFTIKDVKVMPESIPAGYEVLQE---LDELDSLLIIDLGGTTLDISQV 181 (320)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHH---SCTTCEEEEEEECSSCEEEEEE
T ss_pred cEEEEEEEEEecCcHHHHHhhhcc---ccCCCCEEEEEcCCCeEEEEEE
Confidence 467778888888888777764210 0123578999999999999876
No 37
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=79.04 E-value=0.8 Score=47.14 Aligned_cols=47 Identities=13% Similarity=0.151 Sum_probs=32.4
Q ss_pred chhhhhhcccccCCc---c-cccccccceEEecccccccchHHHHHHhhhh
Q psy6341 97 PISEIVDTVIQNCPI---D-VRRPLYHNIVLSGGSTMFRDFGRRLQRDIKR 143 (465)
Q Consensus 97 gL~elI~~sI~~c~~---d-~R~~L~~NIVLsGGsSl~~Gf~eRL~~EL~~ 143 (465)
-+.+.|.++|..... + ....+.+.|||+||+|++||+.+.+.+.+..
T Consensus 304 ei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~ 354 (419)
T 4a2a_A 304 EIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKS 354 (419)
T ss_dssp HHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCC
Confidence 455666666665543 1 1456778999999999999999999988754
No 38
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=77.68 E-value=0.5 Score=51.72 Aligned_cols=63 Identities=10% Similarity=0.191 Sum_probs=39.1
Q ss_pred eEEEeccccccccCCCCCCCCchhhhhhcccccCCcccccccccceEEecccccccchHHHHHHhhh
Q psy6341 76 FTQNFQFKSFLFSFSNPDFTTPISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIK 142 (465)
Q Consensus 76 ~~I~l~~Erf~PEl~~~~~~~gL~elI~~sI~~c~~d~R~~L~~NIVLsGGsSl~~Gf~eRL~~EL~ 142 (465)
..+.|+.+.|. +++.+- ...+.+.|.++|..+.. ...-...|+|+||+|.+|++.++|.+.+.
T Consensus 297 ~~~~itr~~fe-~l~~~l-~~~i~~~i~~~L~~a~l--~~~~I~~VvLvGGssriP~v~~~l~~~fg 359 (675)
T 3d2f_A 297 VSSQLSREELE-ELVKPL-LERVTEPVTKALAQAKL--SAEEVDFVEIIGGTTRIPTLKQSISEAFG 359 (675)
T ss_dssp EEEEEEHHHHH-HHTHHH-HTTTTHHHHHHHHHHTC--CGGGCCEEEEESGGGGSHHHHHHHHHHHT
T ss_pred EEEEEeHHHHH-HHHHHH-HHHHHHHHHHHHHHhCC--ChhhCcEEEEECCCccChHHHHHHHHhcC
Confidence 35666666665 111111 12345555555554432 22234799999999999999999997774
No 39
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=74.70 E-value=1.2 Score=44.86 Aligned_cols=45 Identities=9% Similarity=0.237 Sum_probs=33.9
Q ss_pred chhhhhhcccccCCcccccccccceEEecccccccchHHHHHHhhhh
Q psy6341 97 PISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIKR 143 (465)
Q Consensus 97 gL~elI~~sI~~c~~d~R~~L~~NIVLsGGsSl~~Gf~eRL~~EL~~ 143 (465)
.+.++|.++|.+.. ......+.|+|+||+|.+|++.++|++.+..
T Consensus 326 ~i~~~i~~~l~~~~--~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~ 370 (409)
T 4gni_A 326 GFNRLVESAVKKAG--LDPLDVDEVIMSGGTSNTPRIAANFRYIFPE 370 (409)
T ss_dssp HHHHHHHHHHHHTT--CCGGGCCEEEEESGGGGCHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHcC--CCHHHCCEEEEECCccccHHHHHHHHHHcCC
Confidence 56666777776553 2344558999999999999999999977743
No 40
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=71.79 E-value=13 Score=40.50 Aligned_cols=53 Identities=11% Similarity=-0.105 Sum_probs=37.7
Q ss_pred hhhhhccCcceEEeechhhhhhhcccccCCcc----CCceeEEEEEcCCCeeEEeec
Q psy6341 219 EIMFESFNVPGLYIAVQAVLALAASWKSRPIE----ERTLTGIVVDSGDGVTHVIPV 271 (465)
Q Consensus 219 EllFE~f~vpsl~~~~~avLslya~~~~~~~~----~g~~tgLVVD~G~s~T~VvPV 271 (465)
.-..+..|+..+.+.+.++.+++++....... ......+|+|+|+++|.|.-+
T Consensus 158 ~~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~ 214 (675)
T 3d2f_A 158 ADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIM 214 (675)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEE
T ss_pred HHHHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEE
Confidence 34567789999999999988877652111000 134679999999999999866
No 41
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=67.24 E-value=0.91 Score=43.26 Aligned_cols=28 Identities=29% Similarity=0.444 Sum_probs=23.8
Q ss_pred ccccccceEEecccccccchHHHHHHhh
Q psy6341 114 RRPLYHNIVLSGGSTMFRDFGRRLQRDI 141 (465)
Q Consensus 114 R~~L~~NIVLsGGsSl~~Gf~eRL~~EL 141 (465)
+....+.|+|+||.+..+++.++|++++
T Consensus 203 ~~~~~~~vvl~GGva~n~~lr~~l~~~~ 230 (276)
T 4ehu_A 203 RIGVQRNVVMVGGVARNSGIVRAMAREI 230 (276)
T ss_dssp HHCCCSSEEEESGGGGCHHHHHHHHHHH
T ss_pred hcccCCeEEEecCccchHHHHHHHHHHH
Confidence 4455689999999999999999998665
No 42
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=54.69 E-value=8.4 Score=41.20 Aligned_cols=34 Identities=21% Similarity=0.221 Sum_probs=21.2
Q ss_pred chhhhhhhcccccCCccCCc-eeEEEEEcCCCeeEEeec
Q psy6341 234 VQAVLALAASWKSRPIEERT-LTGIVVDSGDGVTHVIPV 271 (465)
Q Consensus 234 ~~avLslya~~~~~~~~~g~-~tgLVVD~G~s~T~VvPV 271 (465)
..+..|.++.... +++ .-..+||+|.++|.+.=+
T Consensus 390 ~ep~AAglaaLTe----DE~eLGvaiIDmGGGTTd~sVf 424 (610)
T 2d0o_A 390 AEAEAAILGALTT----PGTTRPLAILDLGAGSTDASII 424 (610)
T ss_dssp EHHHHHHHHHTTS----TTCCSSEEEEEECSSEEEEEEE
T ss_pred ccHHHhhhhhcCC----CCCcCCeEEEEeCCCcceEEEE
Confidence 4455555554221 132 346789999999998755
No 43
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=52.68 E-value=7.4 Score=41.67 Aligned_cols=17 Identities=29% Similarity=0.341 Sum_probs=14.3
Q ss_pred eEEEEEcCCCeeEEeec
Q psy6341 255 TGIVVDSGDGVTHVIPV 271 (465)
Q Consensus 255 tgLVVD~G~s~T~VvPV 271 (465)
-..+||+|.++|++.=+
T Consensus 410 GvaiIDmGgGTTd~sVf 426 (607)
T 1nbw_A 410 PLAILDLGAGSTDAAIV 426 (607)
T ss_dssp SEEEEEECSSEEEEEEE
T ss_pred CeEEEEeCCCcceEEEE
Confidence 46789999999998755
No 44
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=47.50 E-value=14 Score=36.97 Aligned_cols=54 Identities=15% Similarity=0.033 Sum_probs=36.7
Q ss_pred hhhhhhccCcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeec
Q psy6341 218 LEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPV 271 (465)
Q Consensus 218 ~EllFE~f~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV 271 (465)
..-..+.-|+.-+.+...+..++++..............+|+|+|.++|.+.=+
T Consensus 169 ~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~ 222 (409)
T 4gni_A 169 LIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVL 222 (409)
T ss_dssp HHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEE
T ss_pred HHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEE
Confidence 344556678888888888888877763221111234679999999999998754
No 45
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=45.19 E-value=9.2 Score=40.98 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=31.0
Q ss_pred chhhhhhcccccCCcccccccccceEEecccccccchHHHHHHhhh
Q psy6341 97 PISEIVDTVIQNCPIDVRRPLYHNIVLSGGSTMFRDFGRRLQRDIK 142 (465)
Q Consensus 97 gL~elI~~sI~~c~~d~R~~L~~NIVLsGGsSl~~Gf~eRL~~EL~ 142 (465)
.+.+.|.++|..... ...-...|+|+||+|.+|++.++|.+.+.
T Consensus 315 ~i~~~v~~~L~~a~~--~~~~i~~VvLvGG~sriP~v~~~l~~~fg 358 (605)
T 4b9q_A 315 RSIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFG 358 (605)
T ss_dssp HTTHHHHHHHHHTTC--CGGGCSEEEEESGGGGSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCC--CHHHCcEEEEeCCccCchHHHHHHHHHhc
Confidence 344555555554332 23345889999999999999999997773
No 46
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=35.00 E-value=12 Score=36.64 Aligned_cols=25 Identities=12% Similarity=0.316 Sum_probs=18.3
Q ss_pred cccccceEEecccccccchHHHHHHhh
Q psy6341 115 RPLYHNIVLSGGSTMFRDFGRRLQRDI 141 (465)
Q Consensus 115 ~~L~~NIVLsGGsSl~~Gf~eRL~~EL 141 (465)
.+++..|+|+||++++ +.+.|++++
T Consensus 276 ~~~~~~IvltGGGA~l--~~~~l~~~~ 300 (329)
T 4apw_A 276 LDQLDSLIFIGGTTQK--LKEQISKTY 300 (329)
T ss_dssp TTSCSEEEEESTTHHH--HHHHHHHHS
T ss_pred HHHccEEEEECChHHH--HHHHHHHHc
Confidence 4557999999999998 345555444
No 47
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=34.30 E-value=18 Score=36.14 Aligned_cols=18 Identities=39% Similarity=0.647 Sum_probs=17.0
Q ss_pred eeEEEEEcCCCeeEEeec
Q psy6341 254 LTGIVVDSGDGVTHVIPV 271 (465)
Q Consensus 254 ~tgLVVD~G~s~T~VvPV 271 (465)
.++|+||+|..+|.++||
T Consensus 127 ~~~llvDIGsTTTDIipi 144 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPI 144 (334)
T ss_dssp SSEEEEEECSSCEEEEEE
T ss_pred CCEEEEEcCcchhhhhhh
Confidence 479999999999999999
No 48
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=31.46 E-value=40 Score=35.99 Aligned_cols=51 Identities=16% Similarity=-0.052 Sum_probs=37.4
Q ss_pred hhhhccCcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeech
Q psy6341 220 IMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPVS 272 (465)
Q Consensus 220 llFE~f~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV~ 272 (465)
-..+..|+.-+.+.+.++.|++++..... ......+|+|+|+++|.|.-++
T Consensus 156 ~A~~~AGl~v~~li~EP~AAAlay~l~~~--~~~~~vlV~DlGGGT~Dvsi~~ 206 (605)
T 2kho_A 156 DAGRIAGLEVKRIINEPTAAALAYGLDKG--TGNRTIAVYDLGGGTFDISIIE 206 (605)
T ss_dssp HHHHTTTCEEEEEEEHHHHHHHHTTTTSS--SSEEEEEEEEECSSCEEEEEEE
T ss_pred HHHHHcCCceEEEecCHHHHHHHhhhccc--CCCCEEEEEECCCCeEEEEEEE
Confidence 34566789999999999888776522211 1246789999999999998663
No 49
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=29.35 E-value=9.4 Score=38.10 Aligned_cols=26 Identities=12% Similarity=0.203 Sum_probs=20.1
Q ss_pred ccccceEEecccccccc--hHHHHHHhh
Q psy6341 116 PLYHNIVLSGGSTMFRD--FGRRLQRDI 141 (465)
Q Consensus 116 ~L~~NIVLsGGsSl~~G--f~eRL~~EL 141 (465)
..+..|+|+||++.+.+ +.+.|++++
T Consensus 289 ~~~~~Ivl~GGGa~l~~~~l~~~i~~~~ 316 (355)
T 3js6_A 289 NSIDRIIVTGGGANIHFDSLSHYYSDVF 316 (355)
T ss_dssp TSCSEEEEESTTHHHHHHHHHHHSSSCE
T ss_pred hhccEEEEECcchhcchhhHHHHHHHHC
Confidence 45689999999999888 666666443
No 50
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=26.43 E-value=46 Score=35.49 Aligned_cols=60 Identities=17% Similarity=0.015 Sum_probs=41.3
Q ss_pred cccccccchhhhhhccCcceEEeechhhhhhhcccccCCccCCceeEEEEEcCCCeeEEeec
Q psy6341 210 WKDCVNQDLEIMFESFNVPGLYIAVQAVLALAASWKSRPIEERTLTGIVVDSGDGVTHVIPV 271 (465)
Q Consensus 210 W~d~ve~~~EllFE~f~vpsl~~~~~avLslya~~~~~~~~~g~~tgLVVD~G~s~T~VvPV 271 (465)
|.+.-++...-..+.-|+.-+.+.+.+..|+++...... .....-+|+|+|.+++.+.-+
T Consensus 146 f~~~qr~a~~~Aa~~AGl~v~~li~EP~AAAlaygl~~~--~~~~~vlV~DlGGGT~Dvsi~ 205 (605)
T 4b9q_A 146 FNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKG--TGNRTIAVYDLGGGAFDISII 205 (605)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHTTSC--CSSEEEEEEEECSSCEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCceEEEeCcHHHHHHHhhhhcc--CCCCEEEEEECCCCeEEEEEE
Confidence 443334444555677788888899988888776622211 134678999999999999855
No 51
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=25.94 E-value=15 Score=36.36 Aligned_cols=14 Identities=14% Similarity=0.354 Sum_probs=12.3
Q ss_pred cccceEEecccccc
Q psy6341 117 LYHNIVLSGGSTMF 130 (465)
Q Consensus 117 L~~NIVLsGGsSl~ 130 (465)
....|||+||++.+
T Consensus 296 ~i~~IvL~GGga~l 309 (346)
T 2fsj_A 296 RVTSLIPVGGGSNL 309 (346)
T ss_dssp GEEEEEEESTTHHH
T ss_pred cccEEEEECCcHHH
Confidence 44899999999988
No 52
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=21.36 E-value=44 Score=35.81 Aligned_cols=25 Identities=20% Similarity=0.340 Sum_probs=22.1
Q ss_pred cceEEecccccccchHHHHHHhhhh
Q psy6341 119 HNIVLSGGSTMFRDFGRRLQRDIKR 143 (465)
Q Consensus 119 ~NIVLsGGsSl~~Gf~eRL~~EL~~ 143 (465)
..|||+||+|+++|+.+=..+.|..
T Consensus 552 ~~VVLTGGsSql~gI~elA~~iL~~ 576 (607)
T 1nbw_A 552 AFVVLVGGSSLDFEIPQLITEALSH 576 (607)
T ss_dssp CEEEEESGGGGSSSHHHHHHHHHHT
T ss_pred CCEEEeCchhhcccHHHHHHHHhCc
Confidence 6799999999999999988877765
No 53
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=20.80 E-value=44 Score=35.75 Aligned_cols=25 Identities=20% Similarity=0.295 Sum_probs=22.0
Q ss_pred cceEEecccccccchHHHHHHhhhh
Q psy6341 119 HNIVLSGGSTMFRDFGRRLQRDIKR 143 (465)
Q Consensus 119 ~NIVLsGGsSl~~Gf~eRL~~EL~~ 143 (465)
..|||+||+|+++|+.+=..+.|..
T Consensus 550 ~~VVLTGGsSql~GI~ElA~~iL~~ 574 (610)
T 2d0o_A 550 PFVVLVGGSSLDFEVPQLVTDALAH 574 (610)
T ss_dssp CEEEEESGGGGCSSHHHHHHHHTTT
T ss_pred CCEEEeCchhhcccHHHHHHHHhCc
Confidence 6799999999999999988877765
Done!