Query psy6344
Match_columns 142
No_of_seqs 116 out of 701
Neff 7.0
Searched_HMMs 29240
Date Sat Aug 17 00:00:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6344.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6344hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f9m_A Glucokinase; hexokinase 100.0 8.7E-49 3E-53 332.3 14.9 140 3-142 17-161 (470)
2 3hm8_A Hexokinase-3; glucose, 100.0 5.2E-46 1.8E-50 313.4 14.5 135 4-142 3-137 (445)
3 3o8m_A Hexokinase; rnaseh-like 100.0 3E-43 1E-47 299.6 15.1 137 3-142 23-162 (485)
4 1bdg_A Hexokinase; phosphotran 100.0 2.7E-42 9.2E-47 291.7 13.4 140 3-142 8-149 (451)
5 1cza_N Hexokinase type I; stru 100.0 5.6E-40 1.9E-44 296.4 12.4 138 5-142 468-608 (917)
6 2yhx_A Hexokinase B; transfera 100.0 1.4E-37 5E-42 263.2 16.1 135 4-142 6-142 (457)
7 1cza_N Hexokinase type I; stru 100.0 2.4E-35 8.1E-40 266.3 14.4 139 4-142 19-160 (917)
8 1z6r_A MLC protein; transcript 97.8 0.00019 6.6E-09 58.5 11.4 120 9-140 35-157 (406)
9 1z05_A Transcriptional regulat 97.8 0.00025 8.4E-09 58.5 11.1 120 9-140 58-180 (429)
10 2hoe_A N-acetylglucosamine kin 97.7 0.00033 1.1E-08 56.9 10.2 119 9-139 38-157 (380)
11 2qm1_A Glucokinase; alpha-beta 97.5 0.00062 2.1E-08 53.5 9.8 71 63-139 6-76 (326)
12 1zc6_A Probable N-acetylglucos 97.4 0.0012 4E-08 51.8 10.0 72 64-139 12-84 (305)
13 1woq_A Inorganic polyphosphate 97.4 0.0018 6.1E-08 49.9 10.6 60 59-122 8-68 (267)
14 2ch5_A NAGK protein; transfera 97.3 0.00098 3.3E-08 52.9 8.1 73 64-139 7-79 (347)
15 4db3_A Glcnac kinase, N-acetyl 97.2 0.0017 5.9E-08 51.6 8.5 54 64-123 25-78 (327)
16 2ap1_A Putative regulator prot 97.0 0.0039 1.3E-07 49.1 9.3 53 64-122 25-77 (327)
17 3ifr_A Carbohydrate kinase, FG 97.0 0.0028 9.6E-08 53.5 8.8 61 63-123 7-70 (508)
18 2p3r_A Glycerol kinase; glycer 97.0 0.003 1E-07 53.4 9.0 64 61-124 1-67 (510)
19 3ll3_A Gluconate kinase; xylul 97.0 0.0036 1.2E-07 52.8 9.1 60 64-123 5-67 (504)
20 2itm_A Xylulose kinase, xylulo 96.9 0.004 1.4E-07 52.1 9.0 59 65-123 2-63 (484)
21 3g25_A Glycerol kinase; IDP007 96.9 0.0038 1.3E-07 52.5 8.7 61 64-124 7-70 (501)
22 4e1j_A Glycerol kinase; struct 96.9 0.0038 1.3E-07 52.9 8.7 61 64-124 27-90 (520)
23 3h3n_X Glycerol kinase; ATP-bi 96.9 0.0051 1.8E-07 51.8 9.3 61 64-124 6-69 (506)
24 2yhw_A Bifunctional UDP-N-acet 96.8 0.0043 1.5E-07 49.3 8.0 69 63-139 30-98 (343)
25 3vgl_A Glucokinase; ROK family 96.8 0.0032 1.1E-07 49.8 7.2 52 64-122 3-54 (321)
26 2dpn_A Glycerol kinase; thermu 96.8 0.0057 2E-07 51.3 9.0 61 64-124 3-66 (495)
27 2w40_A Glycerol kinase, putati 96.8 0.0064 2.2E-07 51.1 9.1 59 64-122 5-66 (503)
28 2e2o_A Hexokinase; acetate and 96.7 0.0037 1.3E-07 48.6 6.9 55 65-122 4-58 (299)
29 3r8e_A Hypothetical sugar kina 96.7 0.0026 9E-08 50.3 6.0 57 60-121 16-72 (321)
30 3hz6_A Xylulokinase; xylulose, 96.7 0.0064 2.2E-07 51.4 8.3 57 64-120 6-65 (511)
31 2zf5_O Glycerol kinase; hypert 96.6 0.0092 3.2E-07 50.1 9.1 61 64-124 4-67 (497)
32 3l0q_A Xylulose kinase; xlylul 96.6 0.0064 2.2E-07 51.8 8.1 61 64-124 6-69 (554)
33 2d4w_A Glycerol kinase; alpha 96.6 0.011 3.7E-07 49.7 9.1 75 64-139 3-80 (504)
34 3ezw_A Glycerol kinase; glycer 96.5 0.0098 3.3E-07 50.3 8.6 65 61-125 2-69 (526)
35 3mcp_A Glucokinase; structural 96.4 0.0062 2.1E-07 49.7 6.6 64 62-139 8-75 (366)
36 3htv_A D-allose kinase, alloki 96.4 0.0072 2.4E-07 47.8 6.5 69 61-139 5-73 (310)
37 2aa4_A Mannac kinase, putative 96.4 0.012 4.1E-07 45.4 7.6 52 65-121 3-54 (289)
38 3vov_A Glucokinase, hexokinase 96.3 0.009 3.1E-07 46.9 6.9 52 65-123 3-54 (302)
39 3jvp_A Ribulokinase; PSI-II, N 96.2 0.015 5E-07 49.8 8.1 61 64-124 6-81 (572)
40 2q2r_A Glucokinase 1, putative 96.2 0.02 7E-07 46.0 8.4 53 63-121 29-84 (373)
41 4htl_A Beta-glucoside kinase; 96.0 0.024 8.1E-07 44.3 7.7 47 64-116 5-51 (297)
42 3h6e_A Carbohydrate kinase, FG 95.9 0.024 8.1E-07 47.8 7.8 57 64-120 7-65 (482)
43 2gup_A ROK family protein; sug 95.9 0.018 6.1E-07 44.5 6.3 47 64-117 5-51 (292)
44 3epq_A Putative fructokinase; 95.8 0.028 9.7E-07 44.2 7.3 45 64-116 4-48 (302)
45 2uyt_A Rhamnulokinase; rhamnos 95.6 0.046 1.6E-06 45.5 8.3 57 64-121 5-69 (489)
46 1zbs_A Hypothetical protein PG 95.4 0.03 1E-06 43.5 6.2 52 65-120 2-53 (291)
47 1sz2_A Glucokinase, glucose ki 95.4 0.063 2.1E-06 42.4 7.9 23 62-84 13-36 (332)
48 3i8b_A Xylulose kinase; strain 95.4 0.045 1.6E-06 46.3 7.5 52 64-118 6-58 (515)
49 3lm2_A Putative kinase; struct 95.1 0.044 1.5E-06 41.8 6.2 46 62-116 5-50 (226)
50 1zxo_A Conserved hypothetical 94.7 0.012 4.2E-07 45.8 2.0 20 65-85 2-21 (291)
51 3djc_A Type III pantothenate k 93.8 0.13 4.3E-06 40.2 6.1 43 65-114 4-46 (266)
52 1saz_A Probable butyrate kinas 93.0 0.42 1.4E-05 38.7 8.2 70 64-139 3-75 (381)
53 3bex_A Type III pantothenate k 92.0 0.19 6.4E-06 38.7 4.6 47 64-116 4-50 (249)
54 2h3g_X Biosynthetic protein; p 88.5 2.1 7.1E-05 33.2 8.0 47 65-117 2-48 (268)
55 4bc3_A Xylulose kinase; transf 86.7 2.3 7.7E-05 35.9 7.8 32 64-95 11-42 (538)
56 2fsj_A Hypothetical protein TA 86.3 0.66 2.2E-05 36.9 4.0 52 61-118 188-239 (346)
57 3qfu_A 78 kDa glucose-regulate 84.8 7 0.00024 30.7 9.4 32 61-92 204-235 (394)
58 3d2f_A Heat shock protein homo 84.5 5.1 0.00018 34.9 9.1 32 63-94 197-228 (675)
59 2kho_A Heat shock protein 70; 84.4 3.4 0.00012 35.4 7.8 54 62-116 187-244 (605)
60 2ych_A Competence protein PILM 83.6 4.8 0.00016 31.6 7.9 56 64-122 14-71 (377)
61 1hux_A Activator of (R)-2-hydr 83.0 0.91 3.1E-05 34.9 3.4 19 64-82 4-22 (270)
62 1yuw_A Heat shock cognate 71 k 81.6 7.5 0.00026 32.8 8.8 30 63-92 193-222 (554)
63 2v7y_A Chaperone protein DNAK; 81.5 6.7 0.00023 32.6 8.4 29 63-91 161-189 (509)
64 3i33_A Heat shock-related 70 k 80.8 9.1 0.00031 30.3 8.7 32 62-93 213-244 (404)
65 4gni_A Putative heat shock pro 78.0 11 0.00039 29.9 8.4 34 63-96 205-238 (409)
66 4ehu_A Activator of 2-hydroxyi 77.6 1.9 6.4E-05 32.7 3.5 18 65-82 3-20 (276)
67 3h1q_A Ethanolamine utilizatio 76.9 11 0.00037 28.0 7.6 19 63-81 28-46 (272)
68 1hjr_A Holliday junction resol 76.7 12 0.0004 26.7 7.4 56 64-119 2-58 (158)
69 4b9q_A Chaperone protein DNAK; 73.4 15 0.00053 31.2 8.5 32 62-93 187-222 (605)
70 1dkg_D Molecular chaperone DNA 72.8 14 0.00048 28.9 7.6 22 62-83 187-208 (383)
71 3tai_A DNA double-strand break 72.4 4.6 0.00016 33.9 4.7 50 14-69 22-71 (471)
72 3nuw_A 2-OXO-3-deoxygalactonat 71.5 7.1 0.00024 30.9 5.5 51 64-119 7-57 (295)
73 4ep4_A Crossover junction endo 69.3 26 0.00088 25.2 7.7 56 64-119 2-62 (166)
74 3zyy_X Iron-sulfur cluster bin 68.4 5.3 0.00018 34.9 4.4 21 66-86 209-230 (631)
75 3t69_A Putative 2-dehydro-3-de 64.6 5.8 0.0002 31.9 3.7 53 64-120 8-60 (330)
76 4gni_A Putative heat shock pro 60.1 11 0.00036 30.0 4.5 18 63-80 13-30 (409)
77 3qfu_A 78 kDa glucose-regulate 57.9 5.9 0.0002 31.1 2.6 20 62-81 17-36 (394)
78 3cet_A Conserved archaeal prot 57.8 8.3 0.00028 31.1 3.5 16 65-80 2-17 (334)
79 1dkg_D Molecular chaperone DNA 55.7 6.2 0.00021 31.0 2.4 18 64-81 3-20 (383)
80 2o97_B NS1, HU-1, DNA-binding 55.0 20 0.00068 22.7 4.4 38 1-38 1-38 (90)
81 2ews_A Pantothenate kinase; PA 54.5 9.1 0.00031 29.9 3.2 18 63-80 20-37 (287)
82 3mdq_A Exopolyphosphatase; str 54.2 74 0.0025 24.7 9.1 57 64-120 5-66 (315)
83 1mul_A NS2, HU-2, DNA binding 53.8 19 0.00066 22.7 4.2 38 1-38 1-38 (90)
84 4a2a_A Cell division protein F 52.3 52 0.0018 26.7 7.5 55 63-118 8-66 (419)
85 3i33_A Heat shock-related 70 k 52.1 9.8 0.00033 30.1 3.0 19 63-81 23-41 (404)
86 3aap_A Ectonucleoside triphosp 51.3 61 0.0021 25.7 7.7 19 64-82 4-22 (353)
87 1p71_A DNA-binding protein HU; 50.9 19 0.00063 23.0 3.8 38 1-38 1-38 (94)
88 1b8z_A Protein (histonelike pr 49.6 20 0.00069 22.6 3.7 38 1-38 1-38 (90)
89 2v7y_A Chaperone protein DNAK; 49.3 13 0.00044 30.8 3.5 18 64-81 3-20 (509)
90 1jce_A ROD shape-determining p 48.9 11 0.00039 29.0 2.9 16 64-79 4-19 (344)
91 3c4i_A DNA-binding protein HU 48.4 21 0.00072 23.0 3.8 38 1-38 1-38 (99)
92 2kho_A Heat shock protein 70; 48.2 11 0.00038 32.1 2.9 18 64-81 3-20 (605)
93 4b9q_A Chaperone protein DNAK; 48.0 14 0.00047 31.6 3.5 19 63-81 2-20 (605)
94 1owf_B IHF-beta, integration H 47.4 28 0.00096 22.1 4.2 38 1-38 1-39 (94)
95 1t6c_A Exopolyphosphatase; alp 46.3 44 0.0015 26.0 6.0 25 64-88 13-37 (315)
96 3cer_A Possible exopolyphospha 44.8 43 0.0015 26.5 5.8 58 64-121 17-80 (343)
97 3rhi_A DNA-binding protein HU; 43.4 22 0.00075 22.7 3.2 38 1-38 4-41 (93)
98 1owf_A IHF-alpha, integration 41.3 28 0.00095 22.4 3.5 38 1-38 3-40 (99)
99 2zgy_A Plasmid segregation pro 40.7 60 0.002 24.8 5.9 21 62-82 163-183 (320)
100 3hi0_A Putative exopolyphospha 39.4 48 0.0016 27.7 5.5 59 62-120 14-77 (508)
101 1u6z_A Exopolyphosphatase; alp 38.7 1.5E+02 0.0051 24.6 8.4 59 64-122 12-75 (513)
102 1yuw_A Heat shock cognate 71 k 38.6 18 0.00063 30.4 2.8 18 64-81 5-22 (554)
103 2iie_A Integration HOST factor 37.9 43 0.0015 24.6 4.5 39 1-39 3-42 (204)
104 1nu0_A Hypothetical protein YQ 37.8 96 0.0033 21.3 6.1 20 63-82 3-22 (138)
105 2np2_A HBB; protein-DNA comple 36.2 46 0.0016 21.7 4.0 38 1-38 9-51 (108)
106 3d2f_A Heat shock protein homo 35.6 24 0.00083 30.6 3.1 17 65-81 4-20 (675)
107 1iv0_A Hypothetical protein; r 35.4 73 0.0025 20.5 4.9 49 64-119 2-50 (98)
108 3nuq_A Protein SSM1, putative 33.9 71 0.0024 23.1 5.2 11 64-74 58-68 (282)
109 1nvp_D Transcription initiatio 33.8 43 0.0015 22.4 3.5 38 2-39 13-50 (108)
110 4ehu_A Activator of 2-hydroxyi 33.4 71 0.0024 23.6 5.2 47 64-116 94-140 (276)
111 2f9w_A Pantothenate kinase; CO 32.2 33 0.0011 26.5 3.1 18 64-81 24-41 (271)
112 1jce_A ROD shape-determining p 30.9 41 0.0014 25.8 3.5 21 63-83 147-167 (344)
113 2zgy_A Plasmid segregation pro 30.3 34 0.0011 26.2 2.9 15 65-79 2-16 (320)
114 3k44_A Purine-rich binding pro 29.3 1.5E+02 0.0051 20.8 6.4 47 63-119 92-143 (146)
115 1use_A VAsp, vasodilator-stimu 29.1 55 0.0019 18.5 2.9 23 16-38 4-26 (45)
116 1exe_A Transcription factor 1; 29.0 24 0.00083 22.8 1.6 39 1-39 1-39 (99)
117 2a22_A Vacuolar protein sortin 28.4 1.5E+02 0.0051 21.1 6.1 34 62-95 181-214 (215)
118 1k8k_A ARP3, actin-like protei 27.6 45 0.0016 26.4 3.3 19 64-82 164-182 (418)
119 1z2w_A Vacuolar protein sortin 27.5 1.5E+02 0.0053 20.5 6.3 35 61-95 156-190 (192)
120 1bi6_H Bromelain inhibitor VI; 27.0 19 0.00065 19.5 0.6 14 60-73 23-36 (41)
121 1nh2_D Transcription initiatio 25.4 68 0.0023 22.0 3.4 38 2-39 17-54 (121)
122 1dtc_A Acetyl-delta-toxin; NMR 25.0 35 0.0012 16.9 1.3 15 106-120 10-24 (26)
123 2id1_A Hypothetical protein; a 24.5 1.7E+02 0.0059 20.0 5.4 42 16-72 43-84 (130)
124 2fxu_A Alpha-actin-1, actin, a 24.5 44 0.0015 26.2 2.6 17 64-80 6-22 (375)
125 1k8k_A ARP3, actin-like protei 24.4 44 0.0015 26.5 2.6 17 64-80 6-22 (418)
126 1kcf_A Hypothetical 30.2 KD pr 23.8 1.2E+02 0.004 23.2 4.9 19 64-82 41-59 (258)
127 2i7n_A Pantothenate kinase 1; 23.2 63 0.0022 26.0 3.4 19 64-82 4-22 (360)
128 3q1c_A LEE-encoded effector ES 22.8 95 0.0032 24.6 4.1 55 25-79 13-71 (360)
129 3ixx_D Peptide PR; WEST NIle v 21.7 36 0.0012 21.7 1.3 16 56-71 23-40 (80)
130 3sm4_A Exonuclease; homologous 21.3 33 0.0011 25.6 1.2 29 106-136 196-224 (229)
131 2ych_A Competence protein PILM 21.3 67 0.0023 24.8 3.1 19 64-82 192-210 (377)
No 1
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=100.00 E-value=8.7e-49 Score=332.26 Aligned_cols=140 Identities=44% Similarity=0.842 Sum_probs=130.8
Q ss_pred hHHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhccCCCCCcccceeccccccCCCCCccccEEEEecCCceEEEEEEEe
Q psy6344 3 VRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYL 82 (142)
Q Consensus 3 ~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~~~~~~s~~~Mlps~v~~~P~G~E~G~fLalDlGGTnlRv~~V~L 82 (142)
..+++++++++|.++.++|++|+++|.+||++||+++++.+|+++||||||+.+|+|+|+|+|||||+||||||||+|+|
T Consensus 17 ~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~~~MlPTyV~~lP~G~E~G~fLAlDlGGTNfRV~~V~L 96 (470)
T 3f9m_A 17 KKEKVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVKV 96 (470)
T ss_dssp HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSTTTTTTCSSCCEEEEEESSCCCCCCEEEEEEEESSSEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhcccCCCCCCcccccCccccCCCCCcceEEEEEEecCceEEEEEEEE
Confidence 45678999999999999999999999999999999887667999999999999999999999999999999999999999
Q ss_pred -cCc----eEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhcCCCCCccceEEEEecccCC
Q psy6344 83 -EEN----HFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFPLTQ 142 (142)
Q Consensus 83 -g~~----~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~~~~~l~lGfTFSFP~~Q 142 (142)
|++ .+++.+++|.||+++|.+++++||||||+||++|+++++..++++||||||||||+|
T Consensus 97 ~g~~~~~~~~~~~~~~~~Ip~~l~~gt~~eLFd~IA~~i~~fl~~~~~~~~~lpLGfTFSFP~~Q 161 (470)
T 3f9m_A 97 GEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFPVRH 161 (470)
T ss_dssp EC----CEEEEEEEEEEECCHHHHSSBHHHHHHHHHHHHHHHHHHTTCSSSCCEEEEEECSCEEE
T ss_pred CCCCCCcceEEEEEEeecCChHhccCCHHHHHHHHHHHHHHHHhhccccccccceEEEEeccccc
Confidence 665 688899999999999999999999999999999999987777889999999999997
No 2
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-46 Score=313.43 Aligned_cols=135 Identities=44% Similarity=0.835 Sum_probs=127.2
Q ss_pred HHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhccCCCCCcccceeccccccCCCCCccccEEEEecCCceEEEEEEEec
Q psy6344 4 RGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYLE 83 (142)
Q Consensus 4 ~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~~~~~~s~~~Mlps~v~~~P~G~E~G~fLalDlGGTnlRv~~V~Lg 83 (142)
.+++++++++|.+++++|++|+++|.+||++||++++ |+++||||||+.+|+|+|+|+|||||+|||||||++|+|+
T Consensus 3 ~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~---s~~~MlPtyv~~~P~G~E~G~~LAlDlGGTn~RV~~V~l~ 79 (445)
T 3hm8_A 3 RRLLEETLAPFRLNHDQLAAVQAQMRKAMAKGLRGEA---SSLRMLPTFVRATPDGSERGDFLALDLGGTNFRVLLVRVT 79 (445)
T ss_dssp HHHHHHHHGGGSCCHHHHHHHHHHHHHHHHHHHHTSC---CSSCCEECCCCSSCCSCCCEEEEEEEESSSSEEEEEEEES
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCC---CCCccCCCCCCCCCCCceeeEEEEEEecCCeEEEEEEEEC
Confidence 4679999999999999999999999999999999865 8999999999999999999999999999999999999993
Q ss_pred CceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhcCCCCCccceEEEEecccCC
Q psy6344 84 ENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFPLTQ 142 (142)
Q Consensus 84 ~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~~~~~l~lGfTFSFP~~Q 142 (142)
++ +++.+++|.||+++|.+++++||||||+||++|+++++..++.+|+||||||||+|
T Consensus 80 g~-~~~~~~~~~ip~~~~~g~~~~LFd~Ia~~i~~fl~~~~~~~~~lplGftFSFP~~Q 137 (445)
T 3hm8_A 80 TG-VQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLSGQSLPLGFTFSFPCRQ 137 (445)
T ss_dssp SS-EEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCTTCCCCEEEEECSCEEC
T ss_pred Cc-eEEEEEEeccCccccCCCHHHHHHHHHHHHHHHHHHhCcccccCcceEEEeeeeEe
Confidence 33 78899999999999999999999999999999999887777889999999999998
No 3
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=100.00 E-value=3e-43 Score=299.62 Aligned_cols=137 Identities=38% Similarity=0.717 Sum_probs=128.2
Q ss_pred hHHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhccCCCCCcccceeccccccCCCCCccccEEEEecCCceEEEEEEEe
Q psy6344 3 VRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYL 82 (142)
Q Consensus 3 ~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~~~~~~s~~~Mlps~v~~~P~G~E~G~fLalDlGGTnlRv~~V~L 82 (142)
....+++++++|.++.++|++|+++|.+||++||++++ ++++||||||+.+|+|+|+|.|||||+|||||||++|+|
T Consensus 23 ~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~---~~~~MlPt~V~~lP~G~E~G~~LalDlGGTn~Rv~~V~l 99 (485)
T 3o8m_A 23 LMEQIHGLETLFTVSSEKMRSIVKHFISELDKGLSKKG---GNIPMIPGWVVEYPTGKETGDFLALDLGGTNLRVVLVKL 99 (485)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHSSSC---CSSCCEECCCCSCCCSCCEEEEEEEEESSSEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhccCC---CCCcccCCCCCCCCCCCcceEEEEEEecCCeEEEEEEEE
Confidence 45688999999999999999999999999999999864 789999999999999999999999999999999999999
Q ss_pred -cCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhcCCC--CCccceEEEEecccCC
Q psy6344 83 -EENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVA--SERLPLGFTFSFPLTQ 142 (142)
Q Consensus 83 -g~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~~--~~~l~lGfTFSFP~~Q 142 (142)
|++.+++.+++|+||.+++.+++++||||||+||++|+++++.. ++.+++||||||||+|
T Consensus 100 ~g~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~l~lGftfSfP~~q 162 (485)
T 3o8m_A 100 GGNHDFDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDGVSEPLPLGFTFSYPASQ 162 (485)
T ss_dssp ESSSCEEEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHHHHCTTCCSSCEEEEEEECSCEEC
T ss_pred CCCCceEEEEEEEecCchhccCCHHHHHHHHHHHHHHHHHHhcccccccccceEEEEeeeEEE
Confidence 87789999999999999999999999999999999999987543 5679999999999987
No 4
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=100.00 E-value=2.7e-42 Score=291.69 Aligned_cols=140 Identities=44% Similarity=0.745 Sum_probs=128.3
Q ss_pred hHHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhccCCCCCcccceeccccccCCCCCccccEEEEecCCceEEEEEEEe
Q psy6344 3 VRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYL 82 (142)
Q Consensus 3 ~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~~~~~~s~~~Mlps~v~~~P~G~E~G~fLalDlGGTnlRv~~V~L 82 (142)
+.+.+++++++|.++.++|++|+++|.+||++||+++.+..|+++||||||+++|+|+|+|.|||||+|||||||++|++
T Consensus 8 ~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V~l 87 (451)
T 1bdg_A 8 LFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLSVTL 87 (451)
T ss_dssp HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSCCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcccCCCCCcccccccccCCCCCCCccceEEEEEeCCCeEEEEEEec
Confidence 45678999999999999999999999999999998422234899999999999999999999999999999999999999
Q ss_pred -c-CceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhcCCCCCccceEEEEecccCC
Q psy6344 83 -E-ENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFPLTQ 142 (142)
Q Consensus 83 -g-~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~~~~~l~lGfTFSFP~~Q 142 (142)
| ++.+++.+++|+||.+++.+++++||||||+||++|+++++...+.+++||||||||+|
T Consensus 88 ~G~~~~~~i~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~~~~lG~tfsfPv~q 149 (451)
T 1bdg_A 88 EGKGKSPRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMKDKKFDLGFTFSFPCVQ 149 (451)
T ss_dssp CC-CCCCEEEEEEECCCTTTTTSBHHHHHHHHHHHHHHHHHHTTCCSSCEEEEEEECSCEEE
T ss_pred CCCCcceEEEEEEEecCCcccCCCHHHHHHHHHHHHHHHHHhcCCCccccceEEEEeeEecc
Confidence 7 67788889999999999999999999999999999999877656679999999999987
No 5
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=5.6e-40 Score=296.45 Aligned_cols=138 Identities=45% Similarity=0.839 Sum_probs=127.8
Q ss_pred HHHHHhcccCccCHHHHHHHHHHHHHHHHHhhccCCCCCcccceeccccccCCCCCccccEEEEecCCceEEEEEEEe-c
Q psy6344 5 GKIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYL-E 83 (142)
Q Consensus 5 ~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~~~~~~s~~~Mlps~v~~~P~G~E~G~fLalDlGGTnlRv~~V~L-g 83 (142)
.++++++++|.++.++|++|+++|.+||++||+++++..|+++||||||+.+|+|+|+|.|||||+|||||||++|++ +
T Consensus 468 ~~i~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~~~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V~l~~ 547 (917)
T 1cza_N 468 RQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRS 547 (917)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSSCCEECSCCSCCCSCCCEEEEEEEESSSSEEEEEEEEEC
T ss_pred hhHHHHHhhhcCCHHHHHHHHHHHHHHHHHHhcccCCCCCCCceECCCCCCCCCCCcceEEEEEEECCCcEEEEEEEeCC
Confidence 467899999999999999999999999999998765456899999999999999999999999999999999999999 5
Q ss_pred Cc--eEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhcCCCCCccceEEEEecccCC
Q psy6344 84 EN--HFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFPLTQ 142 (142)
Q Consensus 84 ~~--~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~~~~~l~lGfTFSFP~~Q 142 (142)
+. .+++.+++|+||.+++.+++++||||||+||++|+++++..++.+++||||||||+|
T Consensus 548 g~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~~l~lG~tfsfPv~q 608 (917)
T 1cza_N 548 GKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIKGPRMPLGFTFSFPCQQ 608 (917)
T ss_dssp STTCEEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCCSSCCEEEEEECSCEEE
T ss_pred CcceeEEeeeeEEecCcccccCCHHHHHHHHHHHHHHHHHHcCCCccceeEEEEeeccccc
Confidence 54 688899999999999999999999999999999999877666789999999999987
No 6
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=100.00 E-value=1.4e-37 Score=263.20 Aligned_cols=135 Identities=22% Similarity=0.334 Sum_probs=124.0
Q ss_pred HHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhccCCCCCcccceeccccccCCCCCccccEEEEecCCceEEEEEEEe-
Q psy6344 4 RGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYL- 82 (142)
Q Consensus 4 ~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~~~~~~s~~~Mlps~v~~~P~G~E~G~fLalDlGGTnlRv~~V~L- 82 (142)
.+.+++++++|.++.++|++|+++|.+||+ ||++++ |+++||||||+.+|+|+|+|.|||||+||||+||++|++
T Consensus 6 ~~~~~~~~~~f~~~~~~L~~i~~~~~~em~-gL~~~~---~~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lV~~~ 81 (457)
T 2yhx_A 6 XSLVEVHXXVFIVPPXILQAVVSILTTRXD-DXDSSA---ASIPMVPGWVLKQVSGAQAGSFLAIVMGGGDLEVILISLA 81 (457)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-HHHSSS---CSSCCEECCCCCCCCSCCCEEEEEEEECSSEEEEEEEEEE
T ss_pred HHHHHHHHhhhcCCHHHHHHHHHHHHHHhc-CCCCCC---CCCccCccccCCCCCCCccceEEEEEeCCCeEEEEEEEeC
Confidence 567899999999999999999999999999 998754 789999999999999999999999999999999999999
Q ss_pred cCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhcCC-CCCccceEEEEecccCC
Q psy6344 83 EENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDV-ASERLPLGFTFSFPLTQ 142 (142)
Q Consensus 83 g~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~-~~~~l~lGfTFSFP~~Q 142 (142)
|+..+++.+++|++|.+++.+++++||||||+||++|+++++. .++.+++|||||||++|
T Consensus 82 G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~lGi~fs~P~~q 142 (457)
T 2yhx_A 82 GRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSSXEFSSXAGSVPLGFTFXEAGAK 142 (457)
T ss_dssp TTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHHHHTSSCSSCEEEEEECCSCCCC
T ss_pred CCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHhhcccccccccceeeEEEEEEEE
Confidence 7777888999999999989999999999999999999987542 24567999999999986
No 7
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=2.4e-35 Score=266.33 Aligned_cols=139 Identities=47% Similarity=0.873 Sum_probs=125.5
Q ss_pred HHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhccCCCCCcccceeccccccCCCCCccccEEEEecCCceEEEEEEEe-
Q psy6344 4 RGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYL- 82 (142)
Q Consensus 4 ~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~~~~~~s~~~Mlps~v~~~P~G~E~G~fLalDlGGTnlRv~~V~L- 82 (142)
..++++++++|.++.++|++|+++|.+||++||+++++..|+++||||||+++|+|+|+|.|||||+||||+||++|++
T Consensus 19 ~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lv~~~ 98 (917)
T 1cza_N 19 VKKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVN 98 (917)
T ss_dssp HHHHHHHTGGGSCCHHHHHHHHHHHHHHHHHHHCTTTGGGCSSCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCCCCCCcccccccccCCCCCCCCcceEEEEEeCCCeEEEEEEEec
Confidence 4578999999999999999999999999999999876666899999999999999999999999999999999999999
Q ss_pred cCc--eEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhcCCCCCccceEEEEecccCC
Q psy6344 83 EEN--HFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFPLTQ 142 (142)
Q Consensus 83 g~~--~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~~~~~l~lGfTFSFP~~Q 142 (142)
|++ .+++.+++|++|.+++.+++++||||||++|++|+++++...+.+++|||||||++|
T Consensus 99 G~~~~~i~~~~~~~~ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~~~~~~lGi~fs~P~~q 160 (917)
T 1cza_N 99 HEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIKDKKLPVGFTFSFPCQQ 160 (917)
T ss_dssp EETTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCTTSCCCEEEEECSCEEC
T ss_pred CCCcceEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHhcCCCCCcccEEEEEcccccc
Confidence 542 355778899999988888899999999999999998765545667999999999986
No 8
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=97.82 E-value=0.00019 Score=58.54 Aligned_cols=120 Identities=11% Similarity=0.101 Sum_probs=71.0
Q ss_pred HhcccCccCHHHHHHHHHHHHHHHHHhhccCCCC-C-cccceeccccccCCCCCccccEEEEecCCceEEEEEEEecCce
Q psy6344 9 EHCKDLVLSDEQLREVMSKLLLAINKGLDKNTNK-E-AVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYLEENH 86 (142)
Q Consensus 9 ~~~~~f~l~~~~L~~i~~~f~~em~~gL~~~~~~-~-s~~~Mlps~v~~~P~G~E~G~fLalDlGGTnlRv~~V~Lg~~~ 86 (142)
++.+.+.+|...+..+.+.+.+ +||-.+... . ++----|+.+.--| +.+.+|+||+|||++|++++++.+..
T Consensus 35 ~la~~~~ls~~tv~~~v~~L~~---~g~i~~~~~~~~~~~GR~~~~l~~~~---~~~~~lgiDiG~t~i~~~l~d~~G~i 108 (406)
T 1z6r_A 35 DLSRLAQLAPASITKIVHEMLE---AHLVQELEIKEAGNRGRPAVGLVVET---EAWHYLSLRISRGEIFLALRDLSSKL 108 (406)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH---HTSEEEC-------------CEEECC---TTCEEEEEEEETTEEEEEEEETTCCE
T ss_pred HHHHHHCCCHHHHHHHHHHHHH---CCcEEeecccCCCCCCCCCeEEEEcC---CccEEEEEEEcCCEEEEEEEcCCCCE
Confidence 5666777888888888888876 477543211 0 11111222222122 34578999999999999999993322
Q ss_pred EEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhcCCC-CCccceEEEEeccc
Q psy6344 87 FKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVA-SERLPLGFTFSFPL 140 (142)
Q Consensus 87 ~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~~-~~~l~lGfTFSFP~ 140 (142)
+.+..+..|. .+.+++++.|++.|.+++++.+.. .+..-+|+...-|+
T Consensus 109 --l~~~~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~v 157 (406)
T 1z6r_A 109 --VVEESQELAL----KDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGII 157 (406)
T ss_dssp --EEEEEEECCS----SCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEESSEE
T ss_pred --EEEEEecCCC----CCHHHHHHHHHHHHHHHHHhcCCCcCceeEEEEEeecCE
Confidence 2333444442 245789999999999998765422 22333444444333
No 9
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=97.76 E-value=0.00025 Score=58.54 Aligned_cols=120 Identities=12% Similarity=0.111 Sum_probs=71.5
Q ss_pred HhcccCccCHHHHHHHHHHHHHHHHHhhccCCC--CCcccceeccccccCCCCCccccEEEEecCCceEEEEEEEecCce
Q psy6344 9 EHCKDLVLSDEQLREVMSKLLLAINKGLDKNTN--KEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYLEENH 86 (142)
Q Consensus 9 ~~~~~f~l~~~~L~~i~~~f~~em~~gL~~~~~--~~s~~~Mlps~v~~~P~G~E~G~fLalDlGGTnlRv~~V~Lg~~~ 86 (142)
++.+.+.+|...+..+.+.+.+ +||-.+.. ..|+-=-=|..+.--| +.+.+|+||+|||++|++++++.+..
T Consensus 58 ela~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~s~~GR~~~~l~~~~---~~~~~lGIDiGgt~i~~~l~d~~G~i 131 (429)
T 1z05_A 58 DLSKESELAPASITKITRELID---AHLIHETTVQEAISRGRPAVGLQTNN---LGWQFLSMRLGRGYLTIALHELGGEV 131 (429)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH---TTSEEEECHHHHHHHTSCCEEEEECC---TTEEEEEEEEETTEEEEEEEETTSCE
T ss_pred HHHHHHCCCHHHHHHHHHHHHH---CCCEEeccccCCCCCCCCCeEEEECC---CCCEEEEEEECCCEEEEEEECCCCCE
Confidence 4556677888888888888876 47754321 0000000011111112 34578999999999999999993322
Q ss_pred EEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhcCCC-CCccceEEEEeccc
Q psy6344 87 FKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVA-SERLPLGFTFSFPL 140 (142)
Q Consensus 87 ~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~~-~~~l~lGfTFSFP~ 140 (142)
+.+..+..+. .+.+++++.|++.|.+++++.+.. .+..-+|+...-|+
T Consensus 132 --l~~~~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~v 180 (429)
T 1z05_A 132 --LIDTKIDIHE----IDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLV 180 (429)
T ss_dssp --EEEEEEECCC----CBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEESSEE
T ss_pred --EEEEEEcCCC----CCHHHHHHHHHHHHHHHHHhcCCCcCceEEEEEeccCcE
Confidence 2344455543 236899999999999998775432 22233444444333
No 10
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=97.66 E-value=0.00033 Score=56.88 Aligned_cols=119 Identities=12% Similarity=0.121 Sum_probs=70.9
Q ss_pred HhcccCccCHHHHHHHHHHHHHHHHHhhccCCC-CCcccceeccccccCCCCCccccEEEEecCCceEEEEEEEecCceE
Q psy6344 9 EHCKDLVLSDEQLREVMSKLLLAINKGLDKNTN-KEAVVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLIIYLEENHF 87 (142)
Q Consensus 9 ~~~~~f~l~~~~L~~i~~~f~~em~~gL~~~~~-~~s~~~Mlps~v~~~P~G~E~G~fLalDlGGTnlRv~~V~Lg~~~~ 87 (142)
++.+...+|...+..+.+.+.+ +||-.+.. ..+..=-=|+.+.- ..+.+.+|+||+|||++|++++++.+..
T Consensus 38 ~la~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~~~GR~~~~l~~---~~~~~~~lGIDiGgt~i~~~l~d~~G~v- 110 (380)
T 2hoe_A 38 ELAEELGLTKTTVGEIAKIFLE---KGIVVEEKDSPKGVGRPTKSLKI---SPNCAYVLGIEVTRDEIAACLIDASMNI- 110 (380)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH---HTSEEEEECCC----CCCEEEEE---CGGGCEEEEEEECSSEEEEEEEETTCCE-
T ss_pred HHHHHHCcCHHHHHHHHHHHHH---CCCEEeecCCCCCCCCCceEEEE---ccCCCeEEEEEECCCEEEEEEECCCCCE-
Confidence 5666777888888888888876 47754310 00110001111111 1234578999999999999999993322
Q ss_pred EEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhcCCCCCccceEEEEecc
Q psy6344 88 KMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFP 139 (142)
Q Consensus 88 ~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~~~~~l~lGfTFSFP 139 (142)
+.+..+..+.. .+.+++++.+++.|.+++++.+... .-.+|..++.|
T Consensus 111 -l~~~~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~~-~~i~gigi~~p 157 (380)
T 2hoe_A 111 -LAHEAHPLPSQ---SDREETLNVMYRIIDRAKDMMEKLG-SKLSALTVAAP 157 (380)
T ss_dssp -EEEEEEECCSS---CCHHHHHHHHHHHHHHHHHHHHHTT-CCCCEEEEEES
T ss_pred -EEEEEEccCCC---CCHHHHHHHHHHHHHHHHHhcCCCc-CcEEEEEEEee
Confidence 23444555432 2468999999999999987643211 12345555544
No 11
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=97.52 E-value=0.00062 Score=53.46 Aligned_cols=71 Identities=17% Similarity=0.241 Sum_probs=48.0
Q ss_pred ccEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhcCCCCCccceEEEEecc
Q psy6344 63 GKFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFP 139 (142)
Q Consensus 63 G~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~~~~~l~lGfTFSFP 139 (142)
+.+|+||+|||++|++++++.+.. +.+..+..+.. .+.+++++.|++.|.+++++.+... .-.+|..++.|
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~i--l~~~~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~~-~~i~~igi~~p 76 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGVV--QQKWSIETNIL---EDGKHIVPSIIESIRHRIDLYNMKK-EDFVGIGMGTP 76 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCE--EEEEEEECCCT---TTTTTHHHHHHHHHHHHHHHTTCCG-GGEEEEEEEES
T ss_pred cEEEEEEECCCEEEEEEECCCCCE--EEEEEEcCCCC---CCHHHHHHHHHHHHHHHHHHcCCCc-cceeEEEEecc
Confidence 468999999999999999993322 33444555432 2467899999999999987754321 22345555544
No 12
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=97.41 E-value=0.0012 Score=51.85 Aligned_cols=72 Identities=8% Similarity=0.154 Sum_probs=46.1
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhcCCCCCcc-ceEEEEecc
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERL-PLGFTFSFP 139 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~~~~~l-~lGfTFSFP 139 (142)
.+|+||+|||+.|++++++.+.. +.+.... +... ..+.+++++.+++.|.+++++.+.....+ ..|..++.|
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~i--l~~~~~~-~~~~-~~~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~~igig~p 84 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGTP--LAMAEGG-ASAL-SQGIAKSWQAVLSTLEAAFQQAGLPAAPASACAIGLGLS 84 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCCE--EEEEEES-CCCG-GGCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEEEEES
T ss_pred EEEEEEcCccceEEEEEcCCCCE--EEEEeCC-CCCc-ccCHHHHHHHHHHHHHHHHHhcCCChhhhccceEEEEec
Confidence 47999999999999999983322 1222111 2111 13468899999999999987654333334 255555554
No 13
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=97.38 E-value=0.0018 Score=49.90 Aligned_cols=60 Identities=18% Similarity=0.303 Sum_probs=40.7
Q ss_pred CCccccEEEEecCCceEEEEEEEe-cCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhh
Q psy6344 59 GKEKGKFLALDLGGTNFRVLIIYL-EENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRD 122 (142)
Q Consensus 59 G~E~G~fLalDlGGTnlRv~~V~L-g~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~ 122 (142)
..+...++++|+|||++|++++++ ++... .....+..+.. .+.+++++.|++.|.+++.+
T Consensus 8 ~~~~~~~lgidiggt~i~~~l~dl~~g~i~-~~~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~ 68 (267)
T 1woq_A 8 SHKNAPLIGIDIGGTGIKGGIVDLKKGKLL-GERFRVPTPQP---ATPESVAEAVALVVAELSAR 68 (267)
T ss_dssp ---CCCEEEEEECSSEEEEEEEETTTTEEE-EEEEEEECCSS---CCHHHHHHHHHHHHHHHHTS
T ss_pred cCCCCEEEEEEECCCEEEEEEEECCCCeEE-EEEEecCCCcc---CCHHHHHHHHHHHHHHHHHh
Confidence 344456899999999999999999 44322 12233444421 24688999999999998764
No 14
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=97.27 E-value=0.00098 Score=52.86 Aligned_cols=73 Identities=14% Similarity=0.096 Sum_probs=45.6
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhcCCCCCccceEEEEecc
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFP 139 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~~~~~l~lGfTFSFP 139 (142)
.+|+||+|||+.|++++++.+.. +.+.... +......+.+++++.|++.|.+++++.+.....-..|..++.|
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~i--~~~~~~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~~p 79 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGKI--LAEADGL-STNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLS 79 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSCE--EEEEEEC-CCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEET
T ss_pred EEEEEEcCccceEEEEEeCCCCE--EEEEeCC-CCCcccCCHHHHHHHHHHHHHHHHHhcCCCcccceeEEEEecc
Confidence 57999999999999999993322 1222221 1111112468899999999999987654322202345555554
No 15
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=97.16 E-value=0.0017 Score=51.63 Aligned_cols=54 Identities=19% Similarity=0.316 Sum_probs=40.3
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhc
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDN 123 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~ 123 (142)
-+|++|+|||++|++++++.+.. +.+..+..|.. +.+++++.|++.|.+.+...
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~i--l~~~~~~~~~~----~~~~~~~~i~~~i~~~~~~~ 78 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLER--VATERVPTPTD----DYPLLLETIAGLVAKYDQEF 78 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCCE--EEEEEEECCTT----CHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCEEEEEEEeCCCcE--EEEEEecCCCC----CHHHHHHHHHHHHHHHHHhc
Confidence 58999999999999999993322 23444555542 46889999999998877643
No 16
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=97.02 E-value=0.0039 Score=49.15 Aligned_cols=53 Identities=17% Similarity=0.272 Sum_probs=39.0
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhh
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRD 122 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~ 122 (142)
.+|++|+|||++|++++++.+.. +.+..+..+.. +.+++++.|++.|.++...
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~g~i--l~~~~~~~~~~----~~~~~~~~i~~~i~~~~~~ 77 (327)
T 2ap1_A 25 MYYGFDIGGTKIALGVFDSTRRL--QWEKRVPTPHT----SYSAFLDAVCELVEEADQR 77 (327)
T ss_dssp EEEEEEECSSEEEEEEEETTCCE--EEEEEEECCCS----CHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECCCEEEEEEEeCCCCE--EEEEEecCCCC----CHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999993322 33444555432 4678999999988887654
No 17
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=97.01 E-value=0.0028 Score=53.53 Aligned_cols=61 Identities=18% Similarity=0.343 Sum_probs=42.3
Q ss_pred ccEEEEecCCceEEEEEEEecCceEEEEEEEeec--CC-CccCCChhHHHHHHHHHHHHHhhhc
Q psy6344 63 GKFLALDLGGTNFRVLIIYLEENHFKMESKVYSI--PQ-DIMTGSGTQLFDHIAECLADFMRDN 123 (142)
Q Consensus 63 G~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~i--p~-~~~~~~~~~lFd~ia~~i~~fl~~~ 123 (142)
.-+|+||+|+|+.|++++...++.....+..+.. |+ .-...+.+++++.+.++|.+.+++.
T Consensus 7 ~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~ 70 (508)
T 3ifr_A 7 RQVIGLDIGTTSTIAILVRLPDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTA 70 (508)
T ss_dssp CEEEEEEECSSEEEEEEEETTTEEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCcceEEEEECCCCCEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhc
Confidence 4689999999999999999733333333444432 21 1123357899999999999987653
No 18
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=97.01 E-value=0.003 Score=53.39 Aligned_cols=64 Identities=19% Similarity=0.348 Sum_probs=44.0
Q ss_pred ccccEEEEecCCceEEEEEEEecCceEEEEEEEeec--CCC-ccCCChhHHHHHHHHHHHHHhhhcC
Q psy6344 61 EKGKFLALDLGGTNFRVLIIYLEENHFKMESKVYSI--PQD-IMTGSGTQLFDHIAECLADFMRDND 124 (142)
Q Consensus 61 E~G~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~i--p~~-~~~~~~~~lFd~ia~~i~~fl~~~~ 124 (142)
|...+|+||+|+|+.|+++++..++.....+..+.. |+. -...+.+++++.+.++|.+.+++.+
T Consensus 1 ~~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~ 67 (510)
T 2p3r_A 1 EKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKAD 67 (510)
T ss_dssp CCCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEEEcCCcceEEEEECCCCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 344689999999999999999833333333333332 221 1233578999999999999887643
No 19
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=96.96 E-value=0.0036 Score=52.80 Aligned_cols=60 Identities=17% Similarity=0.282 Sum_probs=42.4
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeec--CC-CccCCChhHHHHHHHHHHHHHhhhc
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSI--PQ-DIMTGSGTQLFDHIAECLADFMRDN 123 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~i--p~-~~~~~~~~~lFd~ia~~i~~fl~~~ 123 (142)
.||+||+|+|+.|+++++..++.+...+..+.. |+ .....+.+++++.+.++|.+.+++.
T Consensus 5 ~~lgIDiGtts~K~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~ 67 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKI 67 (504)
T ss_dssp EEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEecCCceEEEEEcCCCCEEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhC
Confidence 579999999999999999843344444444432 22 2223457899999999999987653
No 20
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.93 E-value=0.004 Score=52.08 Aligned_cols=59 Identities=10% Similarity=0.309 Sum_probs=40.9
Q ss_pred EEEEecCCceEEEEEEEecCceEEEEEEEeec--CCC-ccCCChhHHHHHHHHHHHHHhhhc
Q psy6344 65 FLALDLGGTNFRVLIIYLEENHFKMESKVYSI--PQD-IMTGSGTQLFDHIAECLADFMRDN 123 (142)
Q Consensus 65 fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~i--p~~-~~~~~~~~lFd~ia~~i~~fl~~~ 123 (142)
||+||+|||+.|+++++..++.....+..+.+ |+. -...+.+++++.+.++|.+.+++.
T Consensus 2 ~lgiDiGtt~~k~~l~d~~g~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~ 63 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQH 63 (484)
T ss_dssp EEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEEecCcccEEEEECCCCCEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhC
Confidence 79999999999999998733333333333332 221 122357899999999999977653
No 21
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=96.89 E-value=0.0038 Score=52.49 Aligned_cols=61 Identities=15% Similarity=0.365 Sum_probs=42.5
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeec--CCC-ccCCChhHHHHHHHHHHHHHhhhcC
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSI--PQD-IMTGSGTQLFDHIAECLADFMRDND 124 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~i--p~~-~~~~~~~~lFd~ia~~i~~fl~~~~ 124 (142)
.+|+||+|+|+.|+++++..++.....+..+.. |+. -...+.+++++.+.++|.+.+++.+
T Consensus 7 ~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~ 70 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQKGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINEND 70 (501)
T ss_dssp EEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEEEEeCccceEEEEEcCCCCEEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcC
Confidence 479999999999999999833333333333432 221 2234578999999999999887643
No 22
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=96.88 E-value=0.0038 Score=52.88 Aligned_cols=61 Identities=13% Similarity=0.292 Sum_probs=42.9
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEee--cCCC-ccCCChhHHHHHHHHHHHHHhhhcC
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYS--IPQD-IMTGSGTQLFDHIAECLADFMRDND 124 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~--ip~~-~~~~~~~~lFd~ia~~i~~fl~~~~ 124 (142)
.+|+||+|+|+.|+++++..++.....+..+. .|+. -...+.+++++.+.++|.+.+++.+
T Consensus 27 ~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~ 90 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGNQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSG 90 (520)
T ss_dssp EEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTT
T ss_pred eEEEEEeCCcceEEEEECCCCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcC
Confidence 57999999999999999983334333344443 2321 2234578999999999999887543
No 23
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=96.87 E-value=0.0051 Score=51.83 Aligned_cols=61 Identities=15% Similarity=0.311 Sum_probs=42.6
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeec--CC-CccCCChhHHHHHHHHHHHHHhhhcC
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSI--PQ-DIMTGSGTQLFDHIAECLADFMRDND 124 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~i--p~-~~~~~~~~~lFd~ia~~i~~fl~~~~ 124 (142)
.+|+||+|+|+.|+++++..++.....+..+.. |+ .-...+.+++++.+.++|.+.+++.+
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~ 69 (506)
T 3h3n_X 6 YVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESG 69 (506)
T ss_dssp EEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEcCCCceEEEEECCCCCEEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 589999999999999999833333333333332 22 12234578999999999999877643
No 24
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=96.82 E-value=0.0043 Score=49.28 Aligned_cols=69 Identities=23% Similarity=0.231 Sum_probs=44.7
Q ss_pred ccEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhcCCCCCccceEEEEecc
Q psy6344 63 GKFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFP 139 (142)
Q Consensus 63 G~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~~~~~l~lGfTFSFP 139 (142)
+.+|+||+|||++|++++++.+.. +.+..+..|. +.+++++.|.+.|.+++.+.... ..-.+|..++.|
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~~G~i--l~~~~~~~~~-----~~~~~~~~i~~~i~~~~~~~~~~-~~~i~gigi~~p 98 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSMKGEI--VKKYTQFNPK-----TYEERINLILQMCVEAAAEAVKL-NCRILGVGISTG 98 (343)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCE--EEEEEEECCS-----SHHHHHHHHHHHHHHHHHHHHHT-TEEEEEEEEEES
T ss_pred cEEEEEEECCCEEEEEEECCCCcE--EEEEEEcCCC-----CHHHHHHHHHHHHHHHHHhcccc-cCceEEEEEecc
Confidence 468999999999999999993322 2233344442 35788899999998887653211 112345555554
No 25
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.81 E-value=0.0032 Score=49.77 Aligned_cols=52 Identities=17% Similarity=0.260 Sum_probs=37.7
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhh
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRD 122 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~ 122 (142)
.+|++|+|||++|++++++.+... .+..+..| .+.+++++.|++.|.+++..
T Consensus 3 ~~lgiDiGgt~i~~~l~d~~G~i~--~~~~~~~~-----~~~~~~~~~i~~~i~~~~~~ 54 (321)
T 3vgl_A 3 LTIGVDIGGTKIAAGVVDEEGRIL--STFKVATP-----PTAEGIVDAICAAVAGASEG 54 (321)
T ss_dssp EEEEEEECSSEEEEEEECTTCCBC--CCEEEECC-----SSHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEECCCEEEEEEECCCCCEE--EEEEeeCC-----CCHHHHHHHHHHHHHHHHhh
Confidence 579999999999999999932222 22223333 24689999999999998653
No 26
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=96.80 E-value=0.0057 Score=51.30 Aligned_cols=61 Identities=18% Similarity=0.315 Sum_probs=41.1
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEee--cCCC-ccCCChhHHHHHHHHHHHHHhhhcC
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYS--IPQD-IMTGSGTQLFDHIAECLADFMRDND 124 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~--ip~~-~~~~~~~~lFd~ia~~i~~fl~~~~ 124 (142)
.||+||+|||+.|+++++..+......+..+. .|.. -...+.+++++.+.++|.+.+++.+
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~ 66 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAG 66 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEeeCCcceEEEEECCCCCEEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcC
Confidence 47999999999999999983333322333332 1221 1223578999999999999877643
No 27
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=96.77 E-value=0.0064 Score=51.12 Aligned_cols=59 Identities=8% Similarity=0.055 Sum_probs=40.1
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeec--CCC-ccCCChhHHHHHHHHHHHHHhhh
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSI--PQD-IMTGSGTQLFDHIAECLADFMRD 122 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~i--p~~-~~~~~~~~lFd~ia~~i~~fl~~ 122 (142)
.||+||+|||+.|+++++..+......+..+.. |.. -...+.+++++.+.++|.+.+++
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~ 66 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEELNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKV 66 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCcceEEEEECCCCCEEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHH
Confidence 479999999999999999833333223333321 211 11235789999999999998765
No 28
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.73 E-value=0.0037 Score=48.59 Aligned_cols=55 Identities=16% Similarity=0.153 Sum_probs=37.8
Q ss_pred EEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhh
Q psy6344 65 FLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRD 122 (142)
Q Consensus 65 fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~ 122 (142)
+|+||+|||+.|++++++.+.. +.+..+..+.. ...+.+++++.|++.|.+++..
T Consensus 4 ~lgiDiGgt~~~~~l~d~~g~i--~~~~~~~~~~~-~~~~~~~~~~~i~~~i~~~~~~ 58 (299)
T 2e2o_A 4 IVGVDAGGTKTKAVAYDCEGNF--IGEGSSGPGNY-HNVGLTRAIENIKEAVKIAAKG 58 (299)
T ss_dssp EEEEEECSSCEEEEEECTTSCE--EEEEEESCCCH-HHHCHHHHHHHHHHHHHHHHTS
T ss_pred EEEEEeCCCcEEEEEEcCCCCE--EEEEeCCCCCc-ccCCHHHHHHHHHHHHHHHHhc
Confidence 7999999999999999983322 22333433321 1124688999999999987653
No 29
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=96.71 E-value=0.0026 Score=50.29 Aligned_cols=57 Identities=16% Similarity=0.314 Sum_probs=39.3
Q ss_pred CccccEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhh
Q psy6344 60 KEKGKFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMR 121 (142)
Q Consensus 60 ~E~G~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~ 121 (142)
...+.+|++|+|||++|++++++.+.. +.+..+..+.. .+.+++++.|++.|.++++
T Consensus 16 ~~~~~~lgidiggt~i~~~l~d~~g~i--l~~~~~~~~~~---~~~~~~~~~i~~~i~~~~~ 72 (321)
T 3r8e_A 16 YFQGMILGIDVGGTSVKFGLVTPEGEI--QNATRFMTADW---VNGIGFVESMKLEIGNFLK 72 (321)
T ss_dssp ---CCEEEEECCSSEEEEEEECTTCCE--EEEEEEEHHHH---HTTTCHHHHHHHHHHHHHH
T ss_pred ccCcEEEEEEECCCEEEEEEEcCCCcE--EEEEEEeCCCC---CCHHHHHHHHHHHHHHHHh
Confidence 345678999999999999999983322 23334444421 2457899999999999875
No 30
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.66 E-value=0.0064 Score=51.37 Aligned_cols=57 Identities=9% Similarity=0.132 Sum_probs=40.9
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeec--CC-CccCCChhHHHHHHHHHHHHHh
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSI--PQ-DIMTGSGTQLFDHIAECLADFM 120 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~i--p~-~~~~~~~~~lFd~ia~~i~~fl 120 (142)
.+|+||+|+|+.|+++++..++.....+..+.+ |+ .-...+.+++++.+.++|.+.+
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~ 65 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRDGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW 65 (511)
T ss_dssp EEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCceEEEEECCCCCEEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH
Confidence 589999999999999999843344344444432 22 2223457899999999999987
No 31
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.63 E-value=0.0092 Score=50.05 Aligned_cols=61 Identities=20% Similarity=0.286 Sum_probs=41.1
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeec--CCC-ccCCChhHHHHHHHHHHHHHhhhcC
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSI--PQD-IMTGSGTQLFDHIAECLADFMRDND 124 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~i--p~~-~~~~~~~~lFd~ia~~i~~fl~~~~ 124 (142)
.||+||+|||+.|+++++..+......+..+.. |+. -...+.+++++.+.++|.+.+++.+
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~g~~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~ 67 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSAR 67 (497)
T ss_dssp EEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCchhEEEEECCCCCEEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcC
Confidence 479999999999999999733333233333321 221 1223578999999999999876643
No 32
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.61 E-value=0.0064 Score=51.79 Aligned_cols=61 Identities=18% Similarity=0.376 Sum_probs=42.7
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeec--C-CCccCCChhHHHHHHHHHHHHHhhhcC
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSI--P-QDIMTGSGTQLFDHIAECLADFMRDND 124 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~i--p-~~~~~~~~~~lFd~ia~~i~~fl~~~~ 124 (142)
-+|+||+|+|+.|++++...++.+...+..+.+ | +.....+.+++++.+.++|.+.+++.+
T Consensus 6 ~~lgIDiGtts~ka~l~d~~G~il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~ 69 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQAD 69 (554)
T ss_dssp EEEEEEECSSEEEEEEEETTSCEEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEECcccEEEEEECCCCCEEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcC
Confidence 579999999999999999833333333443332 2 122234578999999999999887643
No 33
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=96.56 E-value=0.011 Score=49.74 Aligned_cols=75 Identities=12% Similarity=0.167 Sum_probs=46.2
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeec--CCC-ccCCChhHHHHHHHHHHHHHhhhcCCCCCccceEEEEecc
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSI--PQD-IMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFP 139 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~i--p~~-~~~~~~~~lFd~ia~~i~~fl~~~~~~~~~l~lGfTFSFP 139 (142)
.+|+||+|+|+.|+++++..+......+..+.. |.. -...+.+++++.+.++|.+.+++.+... .-..|+.+|-|
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~-~~i~~Igis~~ 80 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSGEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTH-EDIAAVGITNQ 80 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCG-GGEEEEEEEEC
T ss_pred EEEEEecCCcceEEEEECCCCCEEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcCCCc-ccEEEEEEeCC
Confidence 479999999999999999833333233333321 211 1123568999999999999877643221 12345555544
No 34
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.52 E-value=0.0098 Score=50.34 Aligned_cols=65 Identities=18% Similarity=0.362 Sum_probs=45.0
Q ss_pred ccccEEEEecCCceEEEEEEEecCceEEEEEEEeec--CC-CccCCChhHHHHHHHHHHHHHhhhcCC
Q psy6344 61 EKGKFLALDLGGTNFRVLIIYLEENHFKMESKVYSI--PQ-DIMTGSGTQLFDHIAECLADFMRDNDV 125 (142)
Q Consensus 61 E~G~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~i--p~-~~~~~~~~~lFd~ia~~i~~fl~~~~~ 125 (142)
|+--||+||+|.|+.|++++...++.+...++.|.. |+ .-..-+.+++++-+.++|.+.+++.+.
T Consensus 2 ekkYvlgID~GTss~Ka~l~d~~G~~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~ 69 (526)
T 3ezw_A 2 EKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADI 69 (526)
T ss_dssp -CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTC
T ss_pred CceEEEEEEccccceeeeEEcCCCCEEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCC
Confidence 555578999999999999998733344444555543 32 122336789999999999998876543
No 35
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=96.43 E-value=0.0062 Score=49.69 Aligned_cols=64 Identities=23% Similarity=0.408 Sum_probs=42.6
Q ss_pred cccEEEEecCCceEEEEEEEecCceEEEEEE-EeecCCCccCCChhHHHHHHHH---HHHHHhhhcCCCCCccceEEEEe
Q psy6344 62 KGKFLALDLGGTNFRVLIIYLEENHFKMESK-VYSIPQDIMTGSGTQLFDHIAE---CLADFMRDNDVASERLPLGFTFS 137 (142)
Q Consensus 62 ~G~fLalDlGGTnlRv~~V~Lg~~~~~~~~~-~~~ip~~~~~~~~~~lFd~ia~---~i~~fl~~~~~~~~~l~lGfTFS 137 (142)
.+.+|++|+|||++|+++++ .+.. +.+. .++.+.. +.+++++.|++ .|.+++. . -.+|+.++
T Consensus 8 ~~~~lgiDIGgt~i~~~l~d-~G~i--l~~~~~~~~~~~----~~~~~l~~i~~~~~~i~~~~~-----~--~i~gIGIa 73 (366)
T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQ-GGKE--IADPVVLPACAD----CLDKCLGNLVEGFKAIQAGLP-----E--APVAISFA 73 (366)
T ss_dssp CCEEEEEECSSSEEEEEEEE-TTEE--CSCCEEEECCTT----CHHHHHHHHHHHHHHHHTTCS-----S--CCCEEEEE
T ss_pred CCEEEEEEECcceEEEEEEE-CCEE--EEEEEEEECCCC----CHHHHHHHHHHHHHHHHHHhh-----c--CCeEEEEE
Confidence 34789999999999999999 5532 1223 4455442 57889999988 6666543 1 23555555
Q ss_pred cc
Q psy6344 138 FP 139 (142)
Q Consensus 138 FP 139 (142)
.|
T Consensus 74 vP 75 (366)
T 3mcp_A 74 FP 75 (366)
T ss_dssp CC
T ss_pred ec
Confidence 55
No 36
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=96.38 E-value=0.0072 Score=47.75 Aligned_cols=69 Identities=17% Similarity=0.290 Sum_probs=43.4
Q ss_pred ccccEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhcCCCCCccceEEEEecc
Q psy6344 61 EKGKFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDNDVASERLPLGFTFSFP 139 (142)
Q Consensus 61 E~G~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~~~~~~~l~lGfTFSFP 139 (142)
+.+.+|++|+|||++|++++.+.+.. +.+.....|+. ..+++.+.|++.|.+++.+.+. -.+|..++.|
T Consensus 5 ~~~~~lgiDiGgt~i~~~l~d~~G~i--l~~~~~~~~~~----~~~~~~~~i~~~i~~~~~~~~~----~i~gigi~~p 73 (310)
T 3htv_A 5 QHNVVAGVDMGATHIRFCLRTAEGET--LHCEKKRTAEV----IAPGLVSGIGEMIDEQLRRFNA----RCHGLVMGFP 73 (310)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTSCE--EEEEEEEHHHH----HTTCHHHHHHHHHHHHHHHHTE----EEEEEEEEES
T ss_pred CCCEEEEEEeCCCEEEEEEECCCCCE--EEEEEecCccc----cHHHHHHHHHHHHHHHHHhcCC----CeeEEEEecc
Confidence 34578999999999999999993322 22333333322 1357888888888887654321 1345555554
No 37
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=96.36 E-value=0.012 Score=45.39 Aligned_cols=52 Identities=19% Similarity=0.328 Sum_probs=37.3
Q ss_pred EEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhh
Q psy6344 65 FLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMR 121 (142)
Q Consensus 65 fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~ 121 (142)
+|++|+|||++|++++++.+.. +.+..+..+.. .+.+++++.|++.|.+++.
T Consensus 3 ~lgidiggt~~~~~l~d~~g~i--l~~~~~~~~~~---~~~~~~~~~i~~~i~~~~~ 54 (289)
T 2aa4_A 3 TLAIDIGGTKLAAALIGADGQI--RDRRELPTPAS---QTPEALRDALSALVSPLQA 54 (289)
T ss_dssp EEEEEECSSEEEEEEECTTCCE--EEEEEEECCSS---CCHHHHHHHHHHHHTTTGG
T ss_pred EEEEEeCCCEEEEEEECCCCCE--EEEEEecCCCC---CCHHHHHHHHHHHHHHHHh
Confidence 7999999999999999983222 23444554432 2368899999888887654
No 38
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=96.34 E-value=0.009 Score=46.89 Aligned_cols=52 Identities=23% Similarity=0.380 Sum_probs=38.3
Q ss_pred EEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhhhc
Q psy6344 65 FLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMRDN 123 (142)
Q Consensus 65 fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~~~ 123 (142)
+|++|+|||++|++++++. +.. ....+..|.. ..+++++.|++.|.+++++.
T Consensus 3 ~lgiDiGgt~i~~~l~d~~-~~l--~~~~~~~~~~----~~~~~~~~i~~~i~~~~~~~ 54 (302)
T 3vov_A 3 VVGLDLGGTKIAAGVFDGK-RLL--SKVVVPTPKE----GGERVAEALAEAAERAEREA 54 (302)
T ss_dssp EEEEEECSSEEEEEEECSS-SBS--CCEEEECCSS----CHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCEEEEEEEeCC-CcE--EEEEEcCCCC----ChHHHHHHHHHHHHHHHhhc
Confidence 6899999999999999984 222 3344444432 23789999999999987653
No 39
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=96.23 E-value=0.015 Score=49.79 Aligned_cols=61 Identities=13% Similarity=0.274 Sum_probs=42.2
Q ss_pred cEEEEecCCceEEEEEEEe-cCceEEEEEEEee-------cCC-------CccCCChhHHHHHHHHHHHHHhhhcC
Q psy6344 64 KFLALDLGGTNFRVLIIYL-EENHFKMESKVYS-------IPQ-------DIMTGSGTQLFDHIAECLADFMRDND 124 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~L-g~~~~~~~~~~~~-------ip~-------~~~~~~~~~lFd~ia~~i~~fl~~~~ 124 (142)
-||+||+|+|+.|++++.. .++.....+..|. .|+ .-...+.+++++-+.++|.+.+++.+
T Consensus 6 ~~lgIDiGTts~Ka~l~d~~~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~~~ 81 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKESG 81 (572)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC--
T ss_pred EEEEEecCCcceEEEEEECCCCeEEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 5899999999999999998 6654444444443 121 11223567899999999999887643
No 40
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=96.20 E-value=0.02 Score=46.03 Aligned_cols=53 Identities=19% Similarity=0.191 Sum_probs=35.7
Q ss_pred ccEEEEecCCceEEEEEEEec---CceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHhh
Q psy6344 63 GKFLALDLGGTNFRVLIIYLE---ENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFMR 121 (142)
Q Consensus 63 G~fLalDlGGTnlRv~~V~Lg---~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl~ 121 (142)
+.+|++|+|||+.|++++++. .+. +..+....|. .+.+++.+.|++.+.+...
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~~~~~~g~--il~~~~~~~~----~~~~~~~~~i~~~i~~~~~ 84 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVREGKNDSVH--ACVTRYSMKR----KDITEIIEFFNEIIELMPA 84 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEECGGGCEE--EEEEEEECTT----CBGGGHHHHHHHHHHHSCH
T ss_pred CeEEEEEEccccEEEEEEecccCCCcc--EEEEeeecCC----CCHHHHHHHHHHHHHHHhh
Confidence 468999999999999999981 222 2222222332 2467888888888877543
No 41
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=95.99 E-value=0.024 Score=44.29 Aligned_cols=47 Identities=23% Similarity=0.410 Sum_probs=30.2
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHH
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECL 116 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i 116 (142)
.+|++|+|||++|++++.+.+.. +.+..+.++. .+.+++.+.|.+.+
T Consensus 5 ~~lgiDiGgt~i~~~l~d~~G~i--l~~~~~~~~~----~~~~~~~~~i~~~~ 51 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLPHGEI--ILTKSAEISG----SDGDQILAEMKVFL 51 (297)
T ss_dssp CEEEEEECSSEEEEEEECTTSCE--EEEEEEECST----TCHHHHHHHHHHHH
T ss_pred EEEEEEeCCCeEEEEEECCCCCE--EEEEEecCCC----CCHHHHHHHHHHHH
Confidence 58999999999999999983322 2334444443 23456666555443
No 42
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=95.92 E-value=0.024 Score=47.77 Aligned_cols=57 Identities=14% Similarity=0.122 Sum_probs=38.6
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeec-CC-CccCCChhHHHHHHHHHHHHHh
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSI-PQ-DIMTGSGTQLFDHIAECLADFM 120 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~i-p~-~~~~~~~~~lFd~ia~~i~~fl 120 (142)
.||+||+|+|+.|+++++-.++.....+..+.+ |. .-...+.+++++.+.++|.+.+
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~G~i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~ 65 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA 65 (482)
T ss_dssp -CEEEEECSSEEEEEEECTTSCEEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT
T ss_pred eEEEEEcCCCCeEEEEEECCCcEEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH
Confidence 479999999999999998633333333444432 11 1223357899999999999865
No 43
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=95.85 E-value=0.018 Score=44.51 Aligned_cols=47 Identities=17% Similarity=0.345 Sum_probs=30.8
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHH
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLA 117 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~ 117 (142)
.+|++|+|||++|++++++.+.. +.+..+..| .+.+++.+.|.+.+.
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~i--l~~~~~~~~-----~~~~~~~~~i~~~i~ 51 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGKI--LDKTSISTP-----ENLEDLLAWLDQRLS 51 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCCE--EEEEEECCC-----SSHHHHHHHHHHHHT
T ss_pred EEEEEEECCCEEEEEEECCCCCE--EEEEEEeCC-----CCHHHHHHHHHHHHH
Confidence 37999999999999999983322 233344444 235666666655543
No 44
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=95.77 E-value=0.028 Score=44.20 Aligned_cols=45 Identities=9% Similarity=0.203 Sum_probs=28.9
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHH
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECL 116 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i 116 (142)
-||++|+|||++|++++++.+.. +.+..++.+ +.+++++.|++.+
T Consensus 4 ~~lgiDiGgt~i~~~l~d~~G~i--l~~~~~~t~------~~~~~l~~i~~~~ 48 (302)
T 3epq_A 4 MLGGIEAGGTXFVCAVGREDGTI--IDRIEFPTX------MPDETIEXVIQYF 48 (302)
T ss_dssp CEEEEEECSSEEEEEEECTTSCE--EEEEEEECC------CHHHHHHHHHHHH
T ss_pred EEEEEEECcceeEEEEEECCCcE--EEEEEecCC------ChHHHHHHHHHHh
Confidence 47999999999999999983322 223334332 2456666555444
No 45
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=95.60 E-value=0.046 Score=45.52 Aligned_cols=57 Identities=21% Similarity=0.182 Sum_probs=36.7
Q ss_pred cEEEEecCCceEEEEEEEe-cCceEEEEEEEee------cCCC-ccCCChhHHHHHHHHHHHHHhh
Q psy6344 64 KFLALDLGGTNFRVLIIYL-EENHFKMESKVYS------IPQD-IMTGSGTQLFDHIAECLADFMR 121 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~L-g~~~~~~~~~~~~------ip~~-~~~~~~~~lFd~ia~~i~~fl~ 121 (142)
.||+||+|+|+.|+++++. |.. ....+..+. .|.. ....+.+++++.|.+++.+...
T Consensus 5 ~~lgiDiGtts~k~~l~d~~g~~-~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~ 69 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLARYEREC-RSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCA 69 (489)
T ss_dssp EEEEEEECSSEEEEEEEEEEGGG-TEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCCceEEEEEecCcc-ceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHh
Confidence 4899999999999999998 432 111221111 1111 1123467899999999988654
No 46
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=95.44 E-value=0.03 Score=43.49 Aligned_cols=52 Identities=13% Similarity=0.007 Sum_probs=33.3
Q ss_pred EEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHh
Q psy6344 65 FLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFM 120 (142)
Q Consensus 65 fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl 120 (142)
||+||+|||+.|+++++ .+. . +...... |.+......+++.+.|++.|.+.+
T Consensus 2 ~lgiDiGGT~~~~~l~d-~g~-i-l~~~~~~-~~~~~~~~~~~~~~~i~~~i~~~~ 53 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EGK-S-LGRFQTS-GINPFQQDRNEIDTALRSEVLPAI 53 (291)
T ss_dssp EEEEEECSSEEEEEEEE-TTE-E-EEEEEEE-CCCTTTSCHHHHHHHHTTTTHHHH
T ss_pred EEEEEeCccceEEEEEe-CCe-E-EEEEECC-CCCcccCCHHHHHHHHHHHHHHHh
Confidence 79999999999999998 543 2 1222121 212212246778888888887654
No 47
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=95.35 E-value=0.063 Score=42.43 Aligned_cols=23 Identities=30% Similarity=0.355 Sum_probs=19.5
Q ss_pred cccEEEEecCCceEEEEEEEe-cC
Q psy6344 62 KGKFLALDLGGTNFRVLIIYL-EE 84 (142)
Q Consensus 62 ~G~fLalDlGGTnlRv~~V~L-g~ 84 (142)
.+.+|++|+||||+|++++++ ++
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g 36 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASG 36 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTC
T ss_pred CCEEEEEEechhheEEEEEECCCC
Confidence 346899999999999999998 44
No 48
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.35 E-value=0.045 Score=46.27 Aligned_cols=52 Identities=8% Similarity=0.091 Sum_probs=36.6
Q ss_pred cEEEEecCCceEEEEEEEe-cCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHH
Q psy6344 64 KFLALDLGGTNFRVLIIYL-EENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLAD 118 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~L-g~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~ 118 (142)
.+|+||+|+|+.|++++.+ .++.....+ .+.|... ..+.+++++.+.+++.+
T Consensus 6 ~~lgIDiGtts~ka~l~d~~~G~i~~~~~--~~~~g~~-e~d~~~~~~~i~~~l~~ 58 (515)
T 3i8b_A 6 LVAGVDTSTQSCKVRVTDAETGELVRFGQ--AKHPNGT-SVDPSYWWSAFQEAAEQ 58 (515)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEE--EECCSSS-EECTHHHHHHHHHHHHH
T ss_pred EEEEEEeccccEEEEEEECCCCeEEEEEE--EeCCCCc-eECHHHHHHHHHHHHHh
Confidence 5799999999999999995 444332223 3345432 23568999998888876
No 49
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=95.14 E-value=0.044 Score=41.80 Aligned_cols=46 Identities=15% Similarity=0.288 Sum_probs=26.4
Q ss_pred cccEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHH
Q psy6344 62 KGKFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECL 116 (142)
Q Consensus 62 ~G~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i 116 (142)
.+.+|++|+|||++|+ +...+ .. ....+.|. ..+.+++.+.|++.+
T Consensus 5 ~~~~lgiDIGGT~i~~--~d~~g-~~---~~~~~t~~---~~~~~~~~~~i~~~i 50 (226)
T 3lm2_A 5 DQTVLAIDIGGSHVKI--GLSTD-GE---ERKVESGK---TMTGPEMVAAVTAMA 50 (226)
T ss_dssp GCCEEEEEECSSEEEE--EETTT-CC---EEEEECCT---TCCHHHHHHHHHHHT
T ss_pred CCEEEEEEECCCEEEE--EECCC-CE---EEEEECCC---CCCHHHHHHHHHHHH
Confidence 4578999999999994 45522 22 12233332 223566666655543
No 50
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=94.71 E-value=0.012 Score=45.76 Aligned_cols=20 Identities=20% Similarity=0.257 Sum_probs=16.1
Q ss_pred EEEEecCCceEEEEEEEecCc
Q psy6344 65 FLALDLGGTNFRVLIIYLEEN 85 (142)
Q Consensus 65 fLalDlGGTnlRv~~V~Lg~~ 85 (142)
||+||+|||+.|+++++ .+.
T Consensus 2 ~lgiDiGGT~i~~~l~d-~g~ 21 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL-NGA 21 (291)
T ss_dssp --CEECCTTCEEEEEEC-SSS
T ss_pred EEEEEeccccEEEEEEc-CCe
Confidence 68999999999999998 543
No 51
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=93.82 E-value=0.13 Score=40.25 Aligned_cols=43 Identities=9% Similarity=0.141 Sum_probs=29.0
Q ss_pred EEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHH
Q psy6344 65 FLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAE 114 (142)
Q Consensus 65 fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~ 114 (142)
+|+||+|+||.++++++ ++ + ....|++|-. ..+.+++..++.+
T Consensus 4 lL~IDIGNT~iK~gl~d-~~-~---l~~~~r~~T~--~~t~de~~~~l~~ 46 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFD-GD-E---IKLRFRHTSK--VSTSDELGIFLKS 46 (266)
T ss_dssp EEEEEECSSEEEEEEEE-TT-E---EEEEEEEECS--CCCHHHHHHHHHH
T ss_pred EEEEEECCCeEEEEEEE-CC-E---EEEEEEecCC--CCCHHHHHHHHHH
Confidence 79999999999999987 33 2 2455666644 3345666555444
No 52
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=92.98 E-value=0.42 Score=38.68 Aligned_cols=70 Identities=17% Similarity=0.282 Sum_probs=40.1
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHH---HHHHHHHhhhcCCCCCccceEEEEecc
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHI---AECLADFMRDNDVASERLPLGFTFSFP 139 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~i---a~~i~~fl~~~~~~~~~l~lGfTFSFP 139 (142)
.+|+||+|||++|+++++++ .. +.+.....+..-. .+.+++.+.+ ++.|.+++++.+... .-..|+ .+.|
T Consensus 3 ~vlgidiGgt~ik~al~d~~--~i-l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~~~~~-~~i~gI-i~~p 75 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE--RM-VKMQNFSHSPDEL-GRFQKILDQLEFREKIARQFVEETGYSL-SSFSAF-VSRG 75 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT--EE-EEEEEEECCHHHH-HTCSSGGGGHHHHHHHHHHHHHTTTCCG-GGCSEE-EEEC
T ss_pred eEEEEECCccceeEEEEecc--hh-eeeeecccCcccc-cchhhHHHHHHHHHHHHHHHHHHcCCCc-cCceEE-EecC
Confidence 47999999999999999973 21 2333344332100 0122344455 777888776543221 224566 6655
No 53
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=91.96 E-value=0.19 Score=38.72 Aligned_cols=47 Identities=19% Similarity=0.361 Sum_probs=29.8
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHH
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECL 116 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i 116 (142)
-+|+||+|+||+++++++ ++.- ...|+++... ..+.+++..++.+.+
T Consensus 4 M~L~IDIGNT~ik~gl~~-~~~l----~~~~r~~T~~-~~t~de~~~~l~~l~ 50 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITE-DGKT----FRRWRLSTGV-FQTEDELFSHLHPLL 50 (249)
T ss_dssp EEEEEEECSSEEEEEEES-SSSS----CEEEEEECCT-TCCHHHHHHHHHHHH
T ss_pred eEEEEEECCCeEEEEEEE-CCEE----EEEEEecCCC-CCCHHHHHHHHHHHH
Confidence 379999999999999886 3321 2234444321 234577777666544
No 54
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=88.47 E-value=2.1 Score=33.20 Aligned_cols=47 Identities=17% Similarity=0.194 Sum_probs=29.1
Q ss_pred EEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHH
Q psy6344 65 FLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLA 117 (142)
Q Consensus 65 fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~ 117 (142)
+|+||+|+||+++++.+ ++ + ....|+++... ..+.+++..++.+.+.
T Consensus 2 lL~IDIGNT~ik~gl~~-~~-~---l~~~~r~~T~~-~~t~de~~~~l~~ll~ 48 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE-EG-E---LRQHWRMETDR-HKTEDEYGMLVKQLLE 48 (268)
T ss_dssp EEEEEECSSEEEEEEEE-TT-E---EEEEEEEECCT-TCCHHHHHHHHHHHHH
T ss_pred EEEEEECcCcEEEEEEE-CC-E---EEEEEEecCCC-cCCHHHHHHHHHHHHH
Confidence 69999999999999987 33 2 12345554321 2235666666555443
No 55
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=86.73 E-value=2.3 Score=35.87 Aligned_cols=32 Identities=25% Similarity=0.277 Sum_probs=24.0
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEee
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYS 95 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ 95 (142)
-||+||+|.|+.|+++++..++.+...+..|.
T Consensus 11 ~~lgID~GTts~Ka~l~d~~G~vv~~~~~~~~ 42 (538)
T 4bc3_A 11 CCLGWDFSTQQVKVVAVDAELNVFYEESVHFD 42 (538)
T ss_dssp EEEEEEECSSEEEEEEEETTCCEEEEEEEEHH
T ss_pred EEEEEEEcCcCEEEEEECCCCCEEEEEEEecC
Confidence 58999999999999999983344444455553
No 56
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=86.33 E-value=0.66 Score=36.91 Aligned_cols=52 Identities=17% Similarity=0.259 Sum_probs=34.8
Q ss_pred ccccEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHH
Q psy6344 61 EKGKFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLAD 118 (142)
Q Consensus 61 E~G~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~ 118 (142)
+.|.++.+|+||.++=+++++++++. .+.. ....+..| ++++-++|++.|..
T Consensus 188 ~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~----~s~~~~lG-g~~i~~~I~~~i~~ 239 (346)
T 2fsj_A 188 QPGYGVVIDVGSRTTDVLTINLMDME-PVVE----LSFSLQIG-VGDAISALSRKIAK 239 (346)
T ss_dssp CSSEEEEEEECSSCEEEEEEETTTTE-ECGG----GCEEESCC-HHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCCcEEEEEEEecCCE-EEee----cCCCcchh-HHHHHHHHHHHHHH
Confidence 44778999999999999999994442 1111 11222223 67888888887754
No 57
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=84.80 E-value=7 Score=30.67 Aligned_cols=32 Identities=25% Similarity=0.603 Sum_probs=24.6
Q ss_pred ccccEEEEecCCceEEEEEEEecCceEEEEEE
Q psy6344 61 EKGKFLALDLGGTNFRVLIIYLEENHFKMESK 92 (142)
Q Consensus 61 E~G~fLalDlGGTnlRv~~V~Lg~~~~~~~~~ 92 (142)
....++.+|+||.++-+.+++.+++.+++...
T Consensus 204 ~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~ 235 (394)
T 3qfu_A 204 KEHQIIVYDLGGGTFDVSLLSIENGVFEVQAT 235 (394)
T ss_dssp SCEEEEEEEECSSCEEEEEEEEETTEEEEEEE
T ss_pred CCceEEEEEcCCCceeEEEEEEeCCEEEEEEE
Confidence 34468999999999999999995555555443
No 58
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=84.49 E-value=5.1 Score=34.88 Aligned_cols=32 Identities=13% Similarity=0.289 Sum_probs=25.1
Q ss_pred ccEEEEecCCceEEEEEEEecCceEEEEEEEe
Q psy6344 63 GKFLALDLGGTNFRVLIIYLEENHFKMESKVY 94 (142)
Q Consensus 63 G~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~ 94 (142)
..++++|+||.++-|.+++++++.+++....+
T Consensus 197 ~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~g 228 (675)
T 3d2f_A 197 RIVAFVDIGHSSYTCSIMAFKKGQLKVLGTAC 228 (675)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTEEEEEEEEE
T ss_pred cEEEEEEcCCCcEEEEEEEecCCeEEEEEEcC
Confidence 46899999999999999999555665554443
No 59
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=84.40 E-value=3.4 Score=35.36 Aligned_cols=54 Identities=20% Similarity=0.279 Sum_probs=33.7
Q ss_pred cccEEEEecCCceEEEEEEEec----CceEEEEEEEeecCCCccCCChhHHHHHHHHHH
Q psy6344 62 KGKFLALDLGGTNFRVLIIYLE----ENHFKMESKVYSIPQDIMTGSGTQLFDHIAECL 116 (142)
Q Consensus 62 ~G~fLalDlGGTnlRv~~V~Lg----~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i 116 (142)
.+.+|++|+||.++-|.+++++ ++.+++.......+---..- ...|.+|+++.+
T Consensus 187 ~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~-D~~l~~~l~~~~ 244 (605)
T 2kho_A 187 NRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDF-DSRLINYLVEEF 244 (605)
T ss_dssp EEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGT-HHHHHHHHHHHH
T ss_pred CCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHH-HHHHHHHHHHHH
Confidence 4469999999999999999995 56666554333322110000 245666665544
No 60
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=83.57 E-value=4.8 Score=31.60 Aligned_cols=56 Identities=13% Similarity=0.304 Sum_probs=31.3
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEE-EEEeecCCCcc-CCChhHHHHHHHHHHHHHhhh
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKME-SKVYSIPQDIM-TGSGTQLFDHIAECLADFMRD 122 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~-~~~~~ip~~~~-~~~~~~lFd~ia~~i~~fl~~ 122 (142)
.+++||+|.|+.|++.++ + +.+.+. .-...+|.... .|.-.+ .+-+++.|.+.+++
T Consensus 14 ~~vgiDiGt~~i~~~~~~-~-~~~~i~~~g~~~~ps~~~~~g~i~d-~~~~~~~ik~~~~~ 71 (377)
T 2ych_A 14 EALGLEIGASALKLVEVS-G-NPPALKALASRPTPPGLLMEGMVAE-PAALAQEIKELLLE 71 (377)
T ss_dssp CCEEEEECSSEEEEEEEE-T-TTTEEEEEEEEECCTTSEETTEESC-HHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCeEEEEEEe-C-CceEEEEEEeEECCCCcccCCCcCC-HHHHHHHHHHHHHH
Confidence 589999999999999876 3 334442 22345565433 332111 23344444444444
No 61
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=83.03 E-value=0.91 Score=34.90 Aligned_cols=19 Identities=26% Similarity=0.389 Sum_probs=17.3
Q ss_pred cEEEEecCCceEEEEEEEe
Q psy6344 64 KFLALDLGGTNFRVLIIYL 82 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~L 82 (142)
-||.||+|||+.++++++-
T Consensus 4 ~~lGiD~Gst~~k~~l~d~ 22 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKD 22 (270)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEEeccceEEEEEEeC
Confidence 4799999999999999985
No 62
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=81.64 E-value=7.5 Score=32.78 Aligned_cols=30 Identities=33% Similarity=0.596 Sum_probs=23.9
Q ss_pred ccEEEEecCCceEEEEEEEecCceEEEEEE
Q psy6344 63 GKFLALDLGGTNFRVLIIYLEENHFKMESK 92 (142)
Q Consensus 63 G~fLalDlGGTnlRv~~V~Lg~~~~~~~~~ 92 (142)
..++++|+||.++-|.+++++++.+++...
T Consensus 193 ~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~ 222 (554)
T 1yuw_A 193 RNVLIFDLGGGTFDVSILTIAAGIFEVKST 222 (554)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTEEEEEEE
T ss_pred cEEEEEEcCCCeEEEEEEEEcCCcEEEEEE
Confidence 469999999999999999995556655443
No 63
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=81.53 E-value=6.7 Score=32.60 Aligned_cols=29 Identities=34% Similarity=0.621 Sum_probs=23.4
Q ss_pred ccEEEEecCCceEEEEEEEecCceEEEEE
Q psy6344 63 GKFLALDLGGTNFRVLIIYLEENHFKMES 91 (142)
Q Consensus 63 G~fLalDlGGTnlRv~~V~Lg~~~~~~~~ 91 (142)
+.+|++|+||.++-+.+++++++.+++..
T Consensus 161 ~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a 189 (509)
T 2v7y_A 161 QTILVYDLGGGTFDVSILELGDGVFEVKA 189 (509)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTEEEEEE
T ss_pred CEEEEEECCCCeEEEEEEEEcCCeEEEEE
Confidence 46899999999999999999555555543
No 64
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=80.80 E-value=9.1 Score=30.26 Aligned_cols=32 Identities=34% Similarity=0.637 Sum_probs=24.3
Q ss_pred cccEEEEecCCceEEEEEEEecCceEEEEEEE
Q psy6344 62 KGKFLALDLGGTNFRVLIIYLEENHFKMESKV 93 (142)
Q Consensus 62 ~G~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~ 93 (142)
...++.+|+||.++-+.+++++++.+++....
T Consensus 213 ~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~ 244 (404)
T 3i33_A 213 EKNVLIFDLGGGTFDVSILTIEDGIFEVKSTA 244 (404)
T ss_dssp CCEEEEEEECSSCEEEEEEEEETTEEEEEEEE
T ss_pred CceEEEEECCCCcEEEEEEEEeCCeEEEEEEe
Confidence 34689999999999999999955555554433
No 65
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=78.00 E-value=11 Score=29.86 Aligned_cols=34 Identities=18% Similarity=0.292 Sum_probs=25.5
Q ss_pred ccEEEEecCCceEEEEEEEecCceEEEEEEEeec
Q psy6344 63 GKFLALDLGGTNFRVLIIYLEENHFKMESKVYSI 96 (142)
Q Consensus 63 G~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~i 96 (142)
..++.+|+||.++-+.+++++++.+++.......
T Consensus 205 ~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~ 238 (409)
T 4gni_A 205 KIIVVADLGGSRSDVTVLASRSGMYTILATVHDY 238 (409)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTEEEEEEEEEES
T ss_pred CEEEEEECCCCceEEEEEEEeCCeEEEEEecCCC
Confidence 3689999999999999999955555555444433
No 66
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=77.55 E-value=1.9 Score=32.66 Aligned_cols=18 Identities=28% Similarity=0.407 Sum_probs=15.9
Q ss_pred EEEEecCCceEEEEEEEe
Q psy6344 65 FLALDLGGTNFRVLIIYL 82 (142)
Q Consensus 65 fLalDlGGTnlRv~~V~L 82 (142)
||.||+|+||..+++++=
T Consensus 3 ~lGID~GsT~tk~av~d~ 20 (276)
T 4ehu_A 3 TMGLDIGSTASKGVILKN 20 (276)
T ss_dssp EEEEEECSSCEEEEEEET
T ss_pred EEEEEcCccEEEEEEEEC
Confidence 789999999999888764
No 67
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=76.91 E-value=11 Score=28.01 Aligned_cols=19 Identities=16% Similarity=0.289 Sum_probs=16.2
Q ss_pred ccEEEEecCCceEEEEEEE
Q psy6344 63 GKFLALDLGGTNFRVLIIY 81 (142)
Q Consensus 63 G~fLalDlGGTnlRv~~V~ 81 (142)
..|.+||+|.+++|++++.
T Consensus 28 ~~~~gIDiGS~s~k~vi~~ 46 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTD 46 (272)
T ss_dssp CCEEEEECCSSEEEEEEEC
T ss_pred CEEEEEEcccceEEEEEEC
Confidence 3589999999999998854
No 68
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=76.69 E-value=12 Score=26.71 Aligned_cols=56 Identities=14% Similarity=0.165 Sum_probs=33.4
Q ss_pred cEEEEecCCceEEEEEEEecCceEEE-EEEEeecCCCccCCChhHHHHHHHHHHHHH
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKM-ESKVYSIPQDIMTGSGTQLFDHIAECLADF 119 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~-~~~~~~ip~~~~~~~~~~lFd~ia~~i~~f 119 (142)
+.|+||-|-++.=.++|+..++..+. ..-..+.+..-....-..+++++.+.|.++
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~~~~~v~~G~i~t~~~~~~~Rl~~i~~~l~~~i~~~ 58 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQF 58 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccCCCCeeEEEEEecCCeEEEEEeeEEECCCCCHHHHHHHHHHHHHHHHHHc
Confidence 47999999999999999983334433 333344442100011246677777766664
No 69
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=73.37 E-value=15 Score=31.25 Aligned_cols=32 Identities=28% Similarity=0.510 Sum_probs=24.0
Q ss_pred cccEEEEecCCceEEEEEEEecC----ceEEEEEEE
Q psy6344 62 KGKFLALDLGGTNFRVLIIYLEE----NHFKMESKV 93 (142)
Q Consensus 62 ~G~fLalDlGGTnlRv~~V~Lg~----~~~~~~~~~ 93 (142)
.+.++.+|+||.++-|.++++++ +.+++....
T Consensus 187 ~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~ 222 (605)
T 4b9q_A 187 NRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATN 222 (605)
T ss_dssp SEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEE
T ss_pred CCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEec
Confidence 35789999999999999999943 455444433
No 70
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=72.81 E-value=14 Score=28.90 Aligned_cols=22 Identities=32% Similarity=0.600 Sum_probs=19.3
Q ss_pred cccEEEEecCCceEEEEEEEec
Q psy6344 62 KGKFLALDLGGTNFRVLIIYLE 83 (142)
Q Consensus 62 ~G~fLalDlGGTnlRv~~V~Lg 83 (142)
...++++|+||.++-+++++.+
T Consensus 187 ~~~~lVvD~Gggttdvsv~~~~ 208 (383)
T 1dkg_D 187 NRTIAVYDLGGGTFDISIIEID 208 (383)
T ss_dssp EEEEEEEEECSSCEEEEEEEEE
T ss_pred CcEEEEEEcCCCeEEEEEEEEE
Confidence 3478999999999999999984
No 71
>3tai_A DNA double-strand break repair protein NURA; recombination, hydrolase; HET: DNA; 2.82A {Pyrococcus furiosus} PDB: 3tal_A* 3taz_A*
Probab=72.43 E-value=4.6 Score=33.92 Aligned_cols=50 Identities=16% Similarity=0.270 Sum_probs=40.8
Q ss_pred CccCHHHHHHHHHHHHHHHHHhhccCCCCCcccceeccccccCCCCCccccEEEEe
Q psy6344 14 LVLSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALD 69 (142)
Q Consensus 14 f~l~~~~L~~i~~~f~~em~~gL~~~~~~~s~~~Mlps~v~~~P~G~E~G~fLalD 69 (142)
..+|++.+++|.+-+.+++++-.+. -.+.|++++...+|+..+ ..+.|+|
T Consensus 22 r~is~~~~~~I~~~L~~~l~~~~~~-----~~ie~i~~~W~elPe~~~-~~iaAVD 71 (471)
T 3tai_A 22 RLLSKQSIERITKILLDELENVREN-----EQIRNIINSWKPLPSPEK-SSIYAVD 71 (471)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHTTC-----SSHHHHHHTCBCCCCCCC-CEEEEEE
T ss_pred eeccHhHHHHHHHHHHHHHHHHHhh-----hchhhhhhhceECCCCCC-ceEEEec
Confidence 4589999999999999999988775 388899999989997744 4778887
No 72
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=71.49 E-value=7.1 Score=30.86 Aligned_cols=51 Identities=24% Similarity=0.387 Sum_probs=29.3
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHH
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADF 119 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~f 119 (142)
.++|+|-|.||||+-++. ++... .+. +-+..++.....+|=.-+.+.+.++
T Consensus 7 ~~IavDWGTs~lRa~l~~-~g~vl--~~~--~~~~Gv~~~~~~~f~~~l~~~~~~w 57 (295)
T 3nuw_A 7 RYIAIDWGSTNLRAWLYQ-GEECL--ESR--QSEAGVTRLNGRSPAAVLAEITQHW 57 (295)
T ss_dssp EEEEEEECSSCEEEEEEE-TTEEE--EEE--EESCCTTCCTTCCHHHHHHHHTTTT
T ss_pred cEEEEEecchheeeeeec-CCcee--hhh--cCCCchhhcCcccHHHHHHHHHHHh
Confidence 689999999999998887 44222 222 2222233222344444555555554
No 73
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=69.28 E-value=26 Score=25.20 Aligned_cols=56 Identities=13% Similarity=0.195 Sum_probs=34.9
Q ss_pred cEEEEecCCceEEEEEEEe-cCc--eEEE-EEEEeecCCCccC-CChhHHHHHHHHHHHHH
Q psy6344 64 KFLALDLGGTNFRVLIIYL-EEN--HFKM-ESKVYSIPQDIMT-GSGTQLFDHIAECLADF 119 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~L-g~~--~~~~-~~~~~~ip~~~~~-~~~~~lFd~ia~~i~~f 119 (142)
+.|.||-|-++.=.++|+. +++ .++. ..-..+.+..... ..-.++|+.+.+.|.++
T Consensus 2 rILGIDPGl~~tG~gvi~~~g~~~~~~~~v~~G~I~t~~~~~~~~RL~~I~~~l~~~i~~~ 62 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAVEGKGALKARLLHGEVVKTSPQEPAKERVGRIHARVLEVLHRF 62 (166)
T ss_dssp EEEEEECCSSEEEEEEEEECSSSSSCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccccCceEEEEEEecCCccceEEEEEeCeEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 4799999999999999999 542 4433 3333444432111 11256777777777665
No 74
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=68.42 E-value=5.3 Score=34.90 Aligned_cols=21 Identities=33% Similarity=0.483 Sum_probs=18.6
Q ss_pred EEEecCCceEEEEEEEe-cCce
Q psy6344 66 LALDLGGTNFRVLIIYL-EENH 86 (142)
Q Consensus 66 LalDlGGTnlRv~~V~L-g~~~ 86 (142)
+|+|+|-|++++.+|.| .+..
T Consensus 209 lAvDiGTTtv~~~LvdL~tG~~ 230 (631)
T 3zyy_X 209 LAIDIGTTTVVVQLVDLVSGKV 230 (631)
T ss_dssp EEEEECSSEEEEEEEETTTCCE
T ss_pred EEEEecccceeEEEEECCCCCE
Confidence 89999999999999999 4443
No 75
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=64.63 E-value=5.8 Score=31.89 Aligned_cols=53 Identities=21% Similarity=0.297 Sum_probs=30.3
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHHh
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADFM 120 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~fl 120 (142)
.++|+|-|.||||+-++.- ++.+ +.+ .+.+..++.....+|-..+.+.+.++.
T Consensus 8 ~~IavDWGTSnlRa~l~~~-~g~v-l~~--~~~~~Gv~~~~~~~f~~~l~~l~~~w~ 60 (330)
T 3t69_A 8 YYAAVDWGTSSFRLWIIGE-DGAV-LAE--RRSAEGMTTAAKTGFHTILDGHLAAVS 60 (330)
T ss_dssp CEEEEEECSSCEEEEEECT-TSCE-EEE--EEESCCHHHHHHHCHHHHHHHHHHHTT
T ss_pred CEEEEEecchheehheecC-CCCc-hhh--hcCCcchhhcCcccHHHHHHHHHHHhh
Confidence 6899999999999987664 2222 122 222333332223445555666666654
No 76
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=60.05 E-value=11 Score=30.03 Aligned_cols=18 Identities=11% Similarity=0.259 Sum_probs=16.2
Q ss_pred ccEEEEecCCceEEEEEE
Q psy6344 63 GKFLALDLGGTNFRVLII 80 (142)
Q Consensus 63 G~fLalDlGGTnlRv~~V 80 (142)
..+++||||.||-.|+++
T Consensus 13 ~~vvGIDlGTt~s~va~~ 30 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHT 30 (409)
T ss_dssp CCEEEEEECSSEEEEEEE
T ss_pred CcEEEEEcCCCeEEEEEE
Confidence 368999999999999987
No 77
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=57.88 E-value=5.9 Score=31.12 Aligned_cols=20 Identities=30% Similarity=0.448 Sum_probs=17.3
Q ss_pred cccEEEEecCCceEEEEEEE
Q psy6344 62 KGKFLALDLGGTNFRVLIIY 81 (142)
Q Consensus 62 ~G~fLalDlGGTnlRv~~V~ 81 (142)
.+..++||||-||.+|++.+
T Consensus 17 ~~~viGID~GTt~s~va~~~ 36 (394)
T 3qfu_A 17 YGTVIGIDLGTTYSCVAVMK 36 (394)
T ss_dssp CCSCEEEEECSSEEEEEEEC
T ss_pred CCCEEEEEeCcCcEEEEEEE
Confidence 45789999999999999874
No 78
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=57.78 E-value=8.3 Score=31.07 Aligned_cols=16 Identities=31% Similarity=0.746 Sum_probs=12.2
Q ss_pred EEEEecCCceEEEEEE
Q psy6344 65 FLALDLGGTNFRVLII 80 (142)
Q Consensus 65 fLalDlGGTnlRv~~V 80 (142)
.+.+|+||-|++++++
T Consensus 2 iiG~DIGGAn~K~a~~ 17 (334)
T 3cet_A 2 ILGIDIGGANTKITEL 17 (334)
T ss_dssp EEEEEEC--CEEEEEE
T ss_pred eeEEEecccceeeeee
Confidence 5899999999999873
No 79
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=55.72 E-value=6.2 Score=31.03 Aligned_cols=18 Identities=44% Similarity=0.588 Sum_probs=15.8
Q ss_pred cEEEEecCCceEEEEEEE
Q psy6344 64 KFLALDLGGTNFRVLIIY 81 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~ 81 (142)
.+++||||.||..|+..+
T Consensus 3 ~~vGIDlGTt~s~va~~~ 20 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMD 20 (383)
T ss_dssp CCCEEECCSSEEEEEEEE
T ss_pred cEEEEEcCCCCEEEEEEE
Confidence 468999999999999874
No 80
>2o97_B NS1, HU-1, DNA-binding protein HU-beta; heterodimer, DNA structure, DNA supercoiling, E DNA binding protein; 2.45A {Escherichia coli} SCOP: a.55.1.1
Probab=54.95 E-value=20 Score=22.67 Aligned_cols=38 Identities=11% Similarity=0.194 Sum_probs=32.9
Q ss_pred CchHHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhcc
Q psy6344 1 MSVRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDK 38 (142)
Q Consensus 1 ~~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~ 38 (142)
|+-..-++.+.+.-.++..+...+.+.|.+.|...|..
T Consensus 1 m~k~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~ 38 (90)
T 2o97_B 1 MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKE 38 (90)
T ss_dssp CBHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 66677778888888899999999999999999999975
No 81
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=54.48 E-value=9.1 Score=29.93 Aligned_cols=18 Identities=22% Similarity=0.357 Sum_probs=15.6
Q ss_pred ccEEEEecCCceEEEEEE
Q psy6344 63 GKFLALDLGGTNFRVLII 80 (142)
Q Consensus 63 G~fLalDlGGTnlRv~~V 80 (142)
+-+++||+|+|+.+++++
T Consensus 20 ~~~iGIDiGsTt~K~V~~ 37 (287)
T 2ews_A 20 HMKVGIDAGGTLIKIVQE 37 (287)
T ss_dssp -CEEEEEECSSEEEEEEE
T ss_pred CeEEEEEEChhhEEEEEE
Confidence 468999999999999886
No 82
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=54.18 E-value=74 Score=24.65 Aligned_cols=57 Identities=16% Similarity=0.280 Sum_probs=34.6
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEE-EEEe--ecCCCcc-CCC-hhHHHHHHHHHHHHHh
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKME-SKVY--SIPQDIM-TGS-GTQLFDHIAECLADFM 120 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~-~~~~--~ip~~~~-~~~-~~~lFd~ia~~i~~fl 120 (142)
+|=|||+|-.++|..++++.++.++.. ..+. ++-+.+- ++. .++=.+-..+++..|.
T Consensus 5 ~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~ 66 (315)
T 3mdq_A 5 RIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFR 66 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHH
Confidence 577999999999999999932555443 3333 3333332 222 3455566666666664
No 83
>1mul_A NS2, HU-2, DNA binding protein HU-alpha; histone-like; HET: DNA; 2.30A {Escherichia coli} SCOP: a.55.1.1 PDB: 2o97_A
Probab=53.79 E-value=19 Score=22.67 Aligned_cols=38 Identities=24% Similarity=0.253 Sum_probs=33.6
Q ss_pred CchHHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhcc
Q psy6344 1 MSVRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDK 38 (142)
Q Consensus 1 ~~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~ 38 (142)
|+-..-++.+.+.-.++..+...+.+.|.+.|...|..
T Consensus 1 m~k~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~ 38 (90)
T 1mul_A 1 MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKE 38 (90)
T ss_dssp CCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 66677777888888899999999999999999999985
No 84
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=52.29 E-value=52 Score=26.66 Aligned_cols=55 Identities=9% Similarity=0.178 Sum_probs=31.2
Q ss_pred ccEEEEecCCceEEEEEEEe-cCceEEEEEEEeecCCCccCCC---hhHHHHHHHHHHHH
Q psy6344 63 GKFLALDLGGTNFRVLIIYL-EENHFKMESKVYSIPQDIMTGS---GTQLFDHIAECLAD 118 (142)
Q Consensus 63 G~fLalDlGGTnlRv~~V~L-g~~~~~~~~~~~~ip~~~~~~~---~~~lFd~ia~~i~~ 118 (142)
..+.+||+|-|+.++...+. +++. ++......-..-++.|. -+..-+-|.+.+.+
T Consensus 8 ~~ivglDIGts~I~~vv~~~~~~~~-~i~g~~~~~s~gv~~G~I~di~~~~~~I~~av~~ 66 (419)
T 4a2a_A 8 VFYTSIDIGSRYIKGLVLGKRDQEW-EALAFSSVKSRGLDEGEIKDAIAFKESVNTLLKE 66 (419)
T ss_dssp CEEEEEEECSSEEEEEEEEC----C-EEEEEEEEECCSEETTEESBHHHHHHHHHHHHHH
T ss_pred CEEEEEEccCCEEEEEEEEEcCCCC-EEEEEEEeccCCeeCCEEEcHHHHHHHHHHHHHH
Confidence 46889999999999999888 4433 44433222234455543 24444444444443
No 85
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=52.06 E-value=9.8 Score=30.09 Aligned_cols=19 Identities=26% Similarity=0.202 Sum_probs=16.6
Q ss_pred ccEEEEecCCceEEEEEEE
Q psy6344 63 GKFLALDLGGTNFRVLIIY 81 (142)
Q Consensus 63 G~fLalDlGGTnlRv~~V~ 81 (142)
...++||||.||-.|++.+
T Consensus 23 ~~viGID~GTt~s~va~~~ 41 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVFQ 41 (404)
T ss_dssp CCCEEEEECSSEEEEEEEE
T ss_pred CCEEEEEcCCccEEEEEEE
Confidence 4589999999999999865
No 86
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=51.29 E-value=61 Score=25.74 Aligned_cols=19 Identities=26% Similarity=0.291 Sum_probs=17.6
Q ss_pred cEEEEecCCceEEEEEEEe
Q psy6344 64 KFLALDLGGTNFRVLIIYL 82 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~L 82 (142)
.+.+||+|-+..|+.+.+.
T Consensus 4 ~~avID~GSns~Rl~I~~~ 22 (353)
T 3aap_A 4 CIAVIDAGSTGSRLHIYSY 22 (353)
T ss_dssp EEEEEEECSSCEEEEEEEE
T ss_pred EEEEEEcCCCCeEEEEEEE
Confidence 5789999999999999998
No 87
>1p71_A DNA-binding protein HU; protein-DNA complex, DNA bending, DNA binding protein-DN; 1.90A {Anabaena SP} SCOP: a.55.1.1 PDB: 1p51_A 1p78_A
Probab=50.89 E-value=19 Score=23.01 Aligned_cols=38 Identities=13% Similarity=0.176 Sum_probs=33.4
Q ss_pred CchHHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhcc
Q psy6344 1 MSVRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDK 38 (142)
Q Consensus 1 ~~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~ 38 (142)
|+-..-++.+.+.-.++..+...+.+.|.+.|...|..
T Consensus 1 M~k~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~ 38 (94)
T 1p71_A 1 MNKGELVDAVAEKASVTKKQADAVLTAALETIIEAVSS 38 (94)
T ss_dssp CBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 66677777787777899999999999999999999985
No 88
>1b8z_A Protein (histonelike protein HU); thermostable DNA binding protein; 1.60A {Thermotoga maritima} SCOP: a.55.1.1 PDB: 1riy_A
Probab=49.59 E-value=20 Score=22.56 Aligned_cols=38 Identities=18% Similarity=0.287 Sum_probs=33.3
Q ss_pred CchHHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhcc
Q psy6344 1 MSVRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDK 38 (142)
Q Consensus 1 ~~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~ 38 (142)
|+-..-++.+.+.-.++..+...+.+.|.+.|...|..
T Consensus 1 mtk~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~ 38 (90)
T 1b8z_A 1 MNKKELIDRVAKKAGAKKKDVKLILDTILETITEALAK 38 (90)
T ss_dssp CCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 66677777787777899999999999999999999975
No 89
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=49.33 E-value=13 Score=30.85 Aligned_cols=18 Identities=39% Similarity=0.578 Sum_probs=16.1
Q ss_pred cEEEEecCCceEEEEEEE
Q psy6344 64 KFLALDLGGTNFRVLIIY 81 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~ 81 (142)
..++||||.||.+|+...
T Consensus 3 ~~iGIDlGTt~s~va~~~ 20 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLE 20 (509)
T ss_dssp CEEEEEECSSEEEEEEEE
T ss_pred CEEEEEcCCceEEEEEEE
Confidence 579999999999999875
No 90
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=48.86 E-value=11 Score=29.03 Aligned_cols=16 Identities=38% Similarity=0.567 Sum_probs=14.1
Q ss_pred cEEEEecCCceEEEEE
Q psy6344 64 KFLALDLGGTNFRVLI 79 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~ 79 (142)
..++||+|.||.+++.
T Consensus 4 ~~igIDlGT~~s~v~~ 19 (344)
T 1jce_A 4 KDIGIDLGTANTLVFL 19 (344)
T ss_dssp CEEEEEECSSEEEEEE
T ss_pred ceEEEEcCcCcEEEEE
Confidence 4689999999999974
No 91
>3c4i_A DNA-binding protein HU homolog; dimerization by four helix bundle interaction, DNA condensat binding; 2.04A {Mycobacterium tuberculosis}
Probab=48.37 E-value=21 Score=23.03 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=33.3
Q ss_pred CchHHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhcc
Q psy6344 1 MSVRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDK 38 (142)
Q Consensus 1 ~~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~ 38 (142)
|+-..-++.+.+...++..+...+.+.|.+.|...|..
T Consensus 1 Mtk~eLi~~ia~~~~lsk~~~~~~l~~~~~~i~~~L~~ 38 (99)
T 3c4i_A 1 MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHK 38 (99)
T ss_dssp CBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 66677777787777899999999999999999999975
No 92
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=48.17 E-value=11 Score=32.14 Aligned_cols=18 Identities=44% Similarity=0.588 Sum_probs=15.6
Q ss_pred cEEEEecCCceEEEEEEE
Q psy6344 64 KFLALDLGGTNFRVLIIY 81 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~ 81 (142)
..++||||.||-.|+.++
T Consensus 3 ~viGIDlGTt~s~va~~~ 20 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp -CEEEECCSSEEEEEEEE
T ss_pred CEEEEEcCCcCEEEEEEE
Confidence 579999999999999875
No 93
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=47.95 E-value=14 Score=31.55 Aligned_cols=19 Identities=47% Similarity=0.672 Sum_probs=16.7
Q ss_pred ccEEEEecCCceEEEEEEE
Q psy6344 63 GKFLALDLGGTNFRVLIIY 81 (142)
Q Consensus 63 G~fLalDlGGTnlRv~~V~ 81 (142)
+..++||||.||-.|++++
T Consensus 2 ~~viGIDlGTT~S~Va~~~ 20 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp CCEEEEECCSSEEEEEEEE
T ss_pred CcEEEEEcCCCcEEEEEEE
Confidence 4579999999999999874
No 94
>1owf_B IHF-beta, integration HOST factor beta-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ouz_B 2ht0_B 1ihf_B 1owg_B
Probab=47.44 E-value=28 Score=22.07 Aligned_cols=38 Identities=11% Similarity=0.207 Sum_probs=32.9
Q ss_pred CchHHHHHHhcccC-ccCHHHHHHHHHHHHHHHHHhhcc
Q psy6344 1 MSVRGKIREHCKDL-VLSDEQLREVMSKLLLAINKGLDK 38 (142)
Q Consensus 1 ~~~~~~~~~~~~~f-~l~~~~L~~i~~~f~~em~~gL~~ 38 (142)
|+-..-++.+.+.. .++..+...+.+.|.+.|...|..
T Consensus 1 Mtk~eli~~ia~~~~~ls~~~~~~~l~~~~~~i~~~L~~ 39 (94)
T 1owf_B 1 MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQ 39 (94)
T ss_dssp CBHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 66677777787774 899999999999999999999975
No 95
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=46.30 E-value=44 Score=26.04 Aligned_cols=25 Identities=16% Similarity=0.476 Sum_probs=20.4
Q ss_pred cEEEEecCCceEEEEEEEecCceEE
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFK 88 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~ 88 (142)
+|-+||+|-+++|+.+++..++.+.
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~~~~ 37 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDGKLS 37 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEE
T ss_pred EEEEEEECcCcEEEEEEEEcCCcEE
Confidence 5889999999999999999333444
No 96
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=44.83 E-value=43 Score=26.51 Aligned_cols=58 Identities=14% Similarity=0.256 Sum_probs=34.4
Q ss_pred cEEEEecCCceEEEEEEEe-cCceEEEEEE-Ee--ecCCCcc-CCC-hhHHHHHHHHHHHHHhh
Q psy6344 64 KFLALDLGGTNFRVLIIYL-EENHFKMESK-VY--SIPQDIM-TGS-GTQLFDHIAECLADFMR 121 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~L-g~~~~~~~~~-~~--~ip~~~~-~~~-~~~lFd~ia~~i~~fl~ 121 (142)
.|=|||+|-.++|..++++ +++.++...+ +. ++-+.+- ++. ..+=.+-..+++.+|..
T Consensus 17 ~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~aL~~f~~ 80 (343)
T 3cer_A 17 TVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAG 80 (343)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTTHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCCccccCCcCHHHHHHHHHHHHHHHH
Confidence 5889999999999999999 5555554322 22 2222221 121 23445555566666643
No 97
>3rhi_A DNA-binding protein HU; structural genomics, center for structural genom infectious diseases, csgid; 2.48A {Bacillus anthracis} SCOP: a.55.1.1 PDB: 1hue_A 1huu_A
Probab=43.38 E-value=22 Score=22.67 Aligned_cols=38 Identities=16% Similarity=0.241 Sum_probs=30.4
Q ss_pred CchHHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhcc
Q psy6344 1 MSVRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDK 38 (142)
Q Consensus 1 ~~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~ 38 (142)
|+-..-++.+.+...++..+...+.+.|.+.|...|..
T Consensus 4 mtk~eLi~~ia~~~~lsk~~~~~~v~~~~~~i~~~L~~ 41 (93)
T 3rhi_A 4 MNKTELIKNVAQNAEISQKEATVVVQTVVESITNTLAA 41 (93)
T ss_dssp ---CHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 45555667777777899999999999999999999985
No 98
>1owf_A IHF-alpha, integration HOST factor alpha-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ihf_A 1ouz_A 1owg_A 2ht0_A
Probab=41.35 E-value=28 Score=22.39 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=32.4
Q ss_pred CchHHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhcc
Q psy6344 1 MSVRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDK 38 (142)
Q Consensus 1 ~~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~ 38 (142)
|+-..-++.+.+.-.++..+...+.+.|.+.|...|..
T Consensus 3 m~k~eli~~ia~~~~ls~~~~~~vl~~~~~~i~~~L~~ 40 (99)
T 1owf_A 3 LTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALEN 40 (99)
T ss_dssp BCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 45566677777777899999999999999999999975
No 99
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=40.72 E-value=60 Score=24.76 Aligned_cols=21 Identities=29% Similarity=0.482 Sum_probs=17.9
Q ss_pred cccEEEEecCCceEEEEEEEe
Q psy6344 62 KGKFLALDLGGTNFRVLIIYL 82 (142)
Q Consensus 62 ~G~fLalDlGGTnlRv~~V~L 82 (142)
....+.+|+||.+.-+++++-
T Consensus 163 ~~~~~vvDiGggttd~~v~~~ 183 (320)
T 2zgy_A 163 LDSLLIIDLGGTTLDISQVMG 183 (320)
T ss_dssp TCEEEEEEECSSCEEEEEEEG
T ss_pred CCCEEEEEcCCCeEEEEEEeC
Confidence 346899999999999999884
No 100
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=39.41 E-value=48 Score=27.70 Aligned_cols=59 Identities=12% Similarity=0.162 Sum_probs=34.5
Q ss_pred cccEEEEecCCceEEEEEEEe-cCceEEEEEEE--eecCCCcc-CCC-hhHHHHHHHHHHHHHh
Q psy6344 62 KGKFLALDLGGTNFRVLIIYL-EENHFKMESKV--YSIPQDIM-TGS-GTQLFDHIAECLADFM 120 (142)
Q Consensus 62 ~G~fLalDlGGTnlRv~~V~L-g~~~~~~~~~~--~~ip~~~~-~~~-~~~lFd~ia~~i~~fl 120 (142)
.-+|=|||+|-.++|..+++. ++.-..+...+ .++-+.+- ++. .++=.+-..+++..|.
T Consensus 14 ~~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~ 77 (508)
T 3hi0_A 14 LAPVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTGRMHEEGVTRALMALRRFH 77 (508)
T ss_dssp CCCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEeecccCccccCCcCHHHHHHHHHHHHHHH
Confidence 346889999999999999999 43322233333 23333321 121 3455556666666663
No 101
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=38.74 E-value=1.5e+02 Score=24.62 Aligned_cols=59 Identities=17% Similarity=0.348 Sum_probs=36.6
Q ss_pred cEEEEecCCceEEEEEEEecCceEEE-EEEEee--cCCCcc-CCC-hhHHHHHHHHHHHHHhhh
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKM-ESKVYS--IPQDIM-TGS-GTQLFDHIAECLADFMRD 122 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~-~~~~~~--ip~~~~-~~~-~~~lFd~ia~~i~~fl~~ 122 (142)
.|=|||+|-.++|..+++..++.+.. ...+.. +-+.+- ++. .++=.+-..+++..|...
T Consensus 12 ~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~ 75 (513)
T 1u6z_A 12 EFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAER 75 (513)
T ss_dssp CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHH
Confidence 58899999999999999993344543 333332 223222 122 356666667777777543
No 102
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=38.60 E-value=18 Score=30.36 Aligned_cols=18 Identities=28% Similarity=0.259 Sum_probs=15.9
Q ss_pred cEEEEecCCceEEEEEEE
Q psy6344 64 KFLALDLGGTNFRVLIIY 81 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~ 81 (142)
..++||||.||-.|+.++
T Consensus 5 ~~iGIDlGTt~s~va~~~ 22 (554)
T 1yuw_A 5 PAVGIDLGTTYSCVGVFQ 22 (554)
T ss_dssp CCEEEEECSSEEEEEEEC
T ss_pred CEEEEEeCcccEEEEEEE
Confidence 469999999999999874
No 103
>2iie_A Integration HOST factor; DNA kinking, bending, U-turn, intercalation, divalent, metal, recombination/DNA complex; HET: DNA; 2.41A {Escherichia coli} PDB: 2iif_A*
Probab=37.92 E-value=43 Score=24.63 Aligned_cols=39 Identities=8% Similarity=0.165 Sum_probs=33.3
Q ss_pred CchHHHHHHhcccCc-cCHHHHHHHHHHHHHHHHHhhccC
Q psy6344 1 MSVRGKIREHCKDLV-LSDEQLREVMSKLLLAINKGLDKN 39 (142)
Q Consensus 1 ~~~~~~~~~~~~~f~-l~~~~L~~i~~~f~~em~~gL~~~ 39 (142)
|+-..-++++..+.. ++..++..+.+.+.++|...|...
T Consensus 3 MtK~eli~~~~~~~~~l~~~~v~~~Ve~~l~~i~~~L~~~ 42 (204)
T 2iie_A 3 STKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQG 42 (204)
T ss_dssp EEHHHHHHHHHTTCTTSCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccHHHHHHHHHHHCCCccHHHHHHHHHHHHHHHHHHHhhc
Confidence 666777778877774 999999999999999999999753
No 104
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=37.80 E-value=96 Score=21.28 Aligned_cols=20 Identities=25% Similarity=0.434 Sum_probs=16.7
Q ss_pred ccEEEEecCCceEEEEEEEe
Q psy6344 63 GKFLALDLGGTNFRVLIIYL 82 (142)
Q Consensus 63 G~fLalDlGGTnlRv~~V~L 82 (142)
|++||||+|-...=||+-.-
T Consensus 3 ~~iLglD~G~kriGvAvsd~ 22 (138)
T 1nu0_A 3 GTLMAFDFGTKSIGVAVGQR 22 (138)
T ss_dssp CEEEEEECCSSEEEEEEEET
T ss_pred CeEEEEEeCCCEEEEEEEcC
Confidence 57999999998888877665
No 105
>2np2_A HBB; protein-DNA complex, DNA-binding protein, DNA-bending protein, dnabii family, HU/IHF family, DNA binding protein/DNA complex; 3.02A {Borrelia burgdorferi}
Probab=36.22 E-value=46 Score=21.74 Aligned_cols=38 Identities=13% Similarity=0.251 Sum_probs=30.9
Q ss_pred CchHHHHHHhc-----ccCccCHHHHHHHHHHHHHHHHHhhcc
Q psy6344 1 MSVRGKIREHC-----KDLVLSDEQLREVMSKLLLAINKGLDK 38 (142)
Q Consensus 1 ~~~~~~~~~~~-----~~f~l~~~~L~~i~~~f~~em~~gL~~ 38 (142)
|+-..-++.+. +.-.++..+...+.+.|.+.|...|..
T Consensus 9 mtk~eLi~~ia~~~~~~~~~lsk~~~~~vl~~~~~~i~~~L~~ 51 (108)
T 2np2_A 9 VTKSDIVDQIALNIKNNNLKLEKKYIRLVIDAFFEELKSNLCS 51 (108)
T ss_dssp EEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHhhhhhhhcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 34445566666 667799999999999999999999975
No 106
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=35.61 E-value=24 Score=30.59 Aligned_cols=17 Identities=29% Similarity=0.374 Sum_probs=15.3
Q ss_pred EEEEecCCceEEEEEEE
Q psy6344 65 FLALDLGGTNFRVLIIY 81 (142)
Q Consensus 65 fLalDlGGTnlRv~~V~ 81 (142)
.++||||.||-.|+.++
T Consensus 4 ~iGIDlGTtns~va~~~ 20 (675)
T 3d2f_A 4 PFGLDLGNNNSVLAVAR 20 (675)
T ss_dssp CEEEECCSSEEEEEEEE
T ss_pred EEEEEcCCCcEEEEEEE
Confidence 68999999999999865
No 107
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=35.41 E-value=73 Score=20.53 Aligned_cols=49 Identities=10% Similarity=-0.011 Sum_probs=27.5
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHH
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADF 119 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~f 119 (142)
++||||+|-...=||+-.-.+.. .+-.-.|+. .+.++.++.|++.+.++
T Consensus 2 riLglD~G~kriGvAvsd~~~~~---A~pl~ti~~----~~~~~~~~~l~~li~e~ 50 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEEGVPL---ASGRGYLVR----KTLEEDVEALLDFVRRE 50 (98)
T ss_dssp CEEEEEESSSEEEEEEECSCCSS---CCCEEEEEC----CCHHHHHHHHHHHHHHH
T ss_pred cEEEEEeCCCEEEEEEEeCCCCe---eeeeEEEEc----cCcHHHHHHHHHHHHHc
Confidence 58999999887777765431110 000111111 13467777777777664
No 108
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=33.88 E-value=71 Score=23.14 Aligned_cols=11 Identities=18% Similarity=0.289 Sum_probs=9.5
Q ss_pred cEEEEecCCce
Q psy6344 64 KFLALDLGGTN 74 (142)
Q Consensus 64 ~fLalDlGGTn 74 (142)
+.+..|+.||=
T Consensus 58 k~i~FDlDGTL 68 (282)
T 3nuq_A 58 KVFFFDIDNCL 68 (282)
T ss_dssp CEEEECCTTTT
T ss_pred CEEEEecCCCc
Confidence 67999999993
No 109
>1nvp_D Transcription initiation factor IIA gamma chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: a.32.1.1 b.56.1.1
Probab=33.79 E-value=43 Score=22.45 Aligned_cols=38 Identities=18% Similarity=0.231 Sum_probs=34.2
Q ss_pred chHHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhccC
Q psy6344 2 SVRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDKN 39 (142)
Q Consensus 2 ~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~~ 39 (142)
++...++++++.=.|+++.-..|-..|-.-|.+.|+..
T Consensus 13 aL~dtLdEli~~~~Isp~la~kVL~~FDksi~~aL~~~ 50 (108)
T 1nvp_D 13 SLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQR 50 (108)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778899999999999999999999999999999864
No 110
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=33.43 E-value=71 Score=23.62 Aligned_cols=47 Identities=17% Similarity=0.342 Sum_probs=30.5
Q ss_pred cEEEEecCCceEEEEEEEecCceEEEEEEEeecCCCccCCChhHHHHHHHHHH
Q psy6344 64 KFLALDLGGTNFRVLIIYLEENHFKMESKVYSIPQDIMTGSGTQLFDHIAECL 116 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i 116 (142)
.+.++|+||....+.++.- ++.+.. +.+-.+.-.+ +.++||-+|..+
T Consensus 94 ~~~vl~lgG~~~~~~~~~~-~g~~~~----~~~~~~~~~g-~G~f~d~~a~~l 140 (276)
T 4ehu_A 94 TRTIIDIGGQDAKVLKLDN-NGRLLN----FLMNDKCAAG-TGRFLDVMAKII 140 (276)
T ss_dssp CCEEEEECSSCEEEEEECT-TSCEEE----EEEECSCSTT-SHHHHHHHHHHH
T ss_pred CCeEEEEcCCCceEEEEEe-cCceEE----EEeCCCcCcc-hhhHHHHHHHHh
Confidence 5789999999999987753 333221 1222333334 468999999877
No 111
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=32.20 E-value=33 Score=26.46 Aligned_cols=18 Identities=28% Similarity=0.364 Sum_probs=16.4
Q ss_pred cEEEEecCCceEEEEEEE
Q psy6344 64 KFLALDLGGTNFRVLIIY 81 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~ 81 (142)
-.|+||+|=||.++++.+
T Consensus 24 M~L~IDiGNT~ik~g~~~ 41 (271)
T 2f9w_A 24 MILELDCGNSLIKWRVIE 41 (271)
T ss_dssp EEEEEEECSSCEEEEEEE
T ss_pred cEEEEEeCCCeeEEEEEe
Confidence 479999999999999876
No 112
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=30.86 E-value=41 Score=25.79 Aligned_cols=21 Identities=29% Similarity=0.474 Sum_probs=18.4
Q ss_pred ccEEEEecCCceEEEEEEEec
Q psy6344 63 GKFLALDLGGTNFRVLIIYLE 83 (142)
Q Consensus 63 G~fLalDlGGTnlRv~~V~Lg 83 (142)
..++++|+||.++-++.++.+
T Consensus 147 ~~~lVvDiGggttdvsv~~~~ 167 (344)
T 1jce_A 147 SGNMVVDIGGGTTEVAVISLG 167 (344)
T ss_dssp SCEEEEEECSSCEEEEEEETT
T ss_pred ceEEEEEeCCCeEEEEEEEcC
Confidence 358999999999999999873
No 113
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=30.26 E-value=34 Score=26.23 Aligned_cols=15 Identities=27% Similarity=0.454 Sum_probs=13.6
Q ss_pred EEEEecCCceEEEEE
Q psy6344 65 FLALDLGGTNFRVLI 79 (142)
Q Consensus 65 fLalDlGGTnlRv~~ 79 (142)
.++||+|-+|.++++
T Consensus 2 ~igiD~G~sntK~~~ 16 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQW 16 (320)
T ss_dssp EEEEEECSSEEEEEE
T ss_pred eEEEecCCccceEEE
Confidence 479999999999987
No 114
>3k44_A Purine-rich binding protein-alpha, isoform B; PUR-alpha, PUR repeat, PUR domain, whirly fold, DNA binding protein, RNA binding protein; 2.10A {Drosophila melanogaster}
Probab=29.26 E-value=1.5e+02 Score=20.84 Aligned_cols=47 Identities=23% Similarity=0.388 Sum_probs=29.7
Q ss_pred ccEEEEecC----CceEEEEEEEe-cCceEEEEEEEeecCCCccCCChhHHHHHHHHHHHHH
Q psy6344 63 GKFLALDLG----GTNFRVLIIYL-EENHFKMESKVYSIPQDIMTGSGTQLFDHIAECLADF 119 (142)
Q Consensus 63 G~fLalDlG----GTnlRv~~V~L-g~~~~~~~~~~~~ip~~~~~~~~~~lFd~ia~~i~~f 119 (142)
-+|+ +|+| |.-+||.-+.. ++. .....||...+ .+|=|.+++-+.+|
T Consensus 92 k~fy-fDl~~N~RGrFLRIsE~~~~~~~-----R~~I~iP~~g~----~~Fr~~l~~~~~~~ 143 (146)
T 3k44_A 92 RRYY-LDLKENARGRFLRVSQTITRGGP-----RSQIALPAQGM----IEFRDALTDLLEEF 143 (146)
T ss_dssp EEEE-EEEEEETTEEEEEEEEEESSCCC-----CEEEEEEGGGH----HHHHHHHHHHHHHH
T ss_pred ceEE-EEecccCcceEEEEEEeeccCCC-----cceEEecHHHH----HHHHHHHHHHHHHh
Confidence 3555 8998 88888888764 331 34466777433 56666666666554
No 115
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=29.14 E-value=55 Score=18.55 Aligned_cols=23 Identities=30% Similarity=0.372 Sum_probs=15.7
Q ss_pred cCHHHHHHHHHHHHHHHHHhhcc
Q psy6344 16 LSDEQLREVMSKLLLAINKGLDK 38 (142)
Q Consensus 16 l~~~~L~~i~~~f~~em~~gL~~ 38 (142)
++..+|..+...+.+||++-|++
T Consensus 4 ~~~~dle~~KqEIL~E~RkElqK 26 (45)
T 1use_A 4 SDYSDLQRVKQELLEEVKKELQK 26 (45)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777777777777776653
No 116
>1exe_A Transcription factor 1; beta ribbon ARMS, DNA-binding, DNA-bending protein; NMR {Bacillus phage SPO1} SCOP: a.55.1.1 PDB: 1wtu_A
Probab=28.96 E-value=24 Score=22.77 Aligned_cols=39 Identities=15% Similarity=0.225 Sum_probs=32.8
Q ss_pred CchHHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhccC
Q psy6344 1 MSVRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDKN 39 (142)
Q Consensus 1 ~~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~~ 39 (142)
|+-..-++.+.+.-.++..+...+.+.|.+.|...|...
T Consensus 1 Mtk~eLi~~ia~~~~lsk~~~~~~l~~~~~~i~~~L~~G 39 (99)
T 1exe_A 1 MNKTELIKAIAQDTGLTQVSVSKMLASFEKIITETVAKG 39 (99)
T ss_dssp CCTTHHHHHHHHHHCSCCTTHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 566666777777778899999999999999999999863
No 117
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=28.36 E-value=1.5e+02 Score=21.11 Aligned_cols=34 Identities=15% Similarity=0.313 Sum_probs=25.6
Q ss_pred cccEEEEecCCceEEEEEEEecCceEEEEEEEee
Q psy6344 62 KGKFLALDLGGTNFRVLIIYLEENHFKMESKVYS 95 (142)
Q Consensus 62 ~G~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ 95 (142)
.+.|..+|+.+..+++-++.+.++.+.+....|+
T Consensus 181 ~~~y~il~i~~~~i~~~~~~~~~~~~~v~~~~~~ 214 (215)
T 2a22_A 181 PPSFMLMALQGNKVVLYVYDLRDGKTNVAMSEFS 214 (215)
T ss_dssp CCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCcEEEEEEeCCcEEEEEEEecCCeEEEEEEEee
Confidence 4679999998888999899994456666665554
No 118
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=27.61 E-value=45 Score=26.43 Aligned_cols=19 Identities=16% Similarity=0.048 Sum_probs=16.4
Q ss_pred cEEEEecCCceEEEEEEEe
Q psy6344 64 KFLALDLGGTNFRVLIIYL 82 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~L 82 (142)
..+++|+||.+..|+.|.-
T Consensus 164 ~glVvDiG~gtt~v~~v~~ 182 (418)
T 1k8k_A 164 TGTVIDSGDGVTHVIPVAE 182 (418)
T ss_dssp CEEEEEESSSCEEEEEEET
T ss_pred eEEEEEcCCCceEEEEeEC
Confidence 3499999999999998864
No 119
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=27.54 E-value=1.5e+02 Score=20.46 Aligned_cols=35 Identities=17% Similarity=0.261 Sum_probs=26.0
Q ss_pred ccccEEEEecCCceEEEEEEEecCceEEEEEEEee
Q psy6344 61 EKGKFLALDLGGTNFRVLIIYLEENHFKMESKVYS 95 (142)
Q Consensus 61 E~G~fLalDlGGTnlRv~~V~Lg~~~~~~~~~~~~ 95 (142)
..+.|..+|+.+..+++-.+.+.++...+....|+
T Consensus 156 ~~~~y~il~~~~~~~~~~~~~~~~~~~~v~~~~~~ 190 (192)
T 1z2w_A 156 IIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 190 (192)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCcEEEEEEECCEEEEEEEEccCCEEEEEEEEEc
Confidence 34679999998888999999994445656655554
No 120
>1bi6_H Bromelain inhibitor VI; cysteine protease inhibitor; NMR {Ananas comosus} SCOP: g.3.12.1 g.3.12.1 PDB: 2bi6_H
Probab=26.98 E-value=19 Score=19.45 Aligned_cols=14 Identities=43% Similarity=0.638 Sum_probs=11.0
Q ss_pred CccccEEEEecCCc
Q psy6344 60 KEKGKFLALDLGGT 73 (142)
Q Consensus 60 ~E~G~fLalDlGGT 73 (142)
.|.|+|+.+|+=.-
T Consensus 23 aefgkyicldlisp 36 (41)
T 1bi6_H 23 AEFGKYICLDLISP 36 (41)
T ss_dssp EETTEEEECEECCS
T ss_pred HHhCceEEEEecCc
Confidence 57899999998543
No 121
>1nh2_D Transcription initiation factor IIA small chain; transcription/DNA; HET: 5IU; 1.90A {Saccharomyces cerevisiae} SCOP: a.32.1.1 b.56.1.1 PDB: 1ytf_D* 1rm1_B
Probab=25.40 E-value=68 Score=21.97 Aligned_cols=38 Identities=13% Similarity=0.112 Sum_probs=34.1
Q ss_pred chHHHHHHhcccCccCHHHHHHHHHHHHHHHHHhhccC
Q psy6344 2 SVRGKIREHCKDLVLSDEQLREVMSKLLLAINKGLDKN 39 (142)
Q Consensus 2 ~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~gL~~~ 39 (142)
++...++++++.=.|+++.-..|-..|-.-|.+.|+..
T Consensus 17 aL~dtLdEli~~~~Isp~la~kVL~~FDksi~~aL~~~ 54 (121)
T 1nh2_D 17 SLVDALDTLISDGRIEASLAMRVLETFDKVVAETLKDN 54 (121)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778899999999999999999999999999999854
No 122
>1dtc_A Acetyl-delta-toxin; NMR {Staphylococcus aureus} SCOP: j.7.1.1 PDB: 2dtb_A 2kam_A*
Probab=25.01 E-value=35 Score=16.93 Aligned_cols=15 Identities=20% Similarity=0.388 Sum_probs=12.0
Q ss_pred hHHHHHHHHHHHHHh
Q psy6344 106 TQLFDHIAECLADFM 120 (142)
Q Consensus 106 ~~lFd~ia~~i~~fl 120 (142)
-+|..||++.++.|.
T Consensus 10 gdfvKlI~~TV~KFt 24 (26)
T 1dtc_A 10 GDLVKWIIDTVNKFT 24 (26)
T ss_dssp HHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHh
Confidence 578888888888875
No 123
>2id1_A Hypothetical protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.00A {Chromobacterium violaceum} SCOP: d.218.1.12
Probab=24.55 E-value=1.7e+02 Score=19.99 Aligned_cols=42 Identities=17% Similarity=0.310 Sum_probs=29.0
Q ss_pred cCHHHHHHHHHHHHHHHHHhhccCCCCCcccceeccccccCCCCCccccEEEEecCC
Q psy6344 16 LSDEQLREVMSKLLLAINKGLDKNTNKEAVVKCFPTYVQDLPNGKEKGKFLALDLGG 72 (142)
Q Consensus 16 l~~~~L~~i~~~f~~em~~gL~~~~~~~s~~~Mlps~v~~~P~G~E~G~fLalDlGG 72 (142)
-|.-+++.|++...+.+++ .+ - -|..+ .|...|+.+.||+|.
T Consensus 43 ~S~rqv~Aiad~v~~~lk~----~g---~----~~~~~----EG~~~~~WvLlD~Gd 84 (130)
T 2id1_A 43 DSNRQVKALANSVQVKLKE----AG---V----DIVGS----EGHESGEWVLVDAGD 84 (130)
T ss_dssp SSHHHHHHHHHHHHHHHHH----TT---C----CCCBC----CSTTTSSEEEEEETT
T ss_pred CCHHHHHHHHHHHHHHHHH----cC---C----cCccc----cCCCCCCEEEEecCC
Confidence 4777888888888777652 11 0 12222 477788999999995
No 124
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=24.53 E-value=44 Score=26.23 Aligned_cols=17 Identities=18% Similarity=0.075 Sum_probs=14.5
Q ss_pred cEEEEecCCceEEEEEE
Q psy6344 64 KFLALDLGGTNFRVLII 80 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V 80 (142)
.-++||+|.+|.|+++.
T Consensus 6 ~~ivID~Gs~~~k~G~~ 22 (375)
T 2fxu_A 6 TALVCDNGSGLVKAGFA 22 (375)
T ss_dssp CCEEEEECSSEEEEEET
T ss_pred ceEEEECCCCeEEEEEC
Confidence 35899999999999764
No 125
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=24.38 E-value=44 Score=26.52 Aligned_cols=17 Identities=12% Similarity=0.004 Sum_probs=14.5
Q ss_pred cEEEEecCCceEEEEEE
Q psy6344 64 KFLALDLGGTNFRVLII 80 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V 80 (142)
..++||+|.+|.|+++.
T Consensus 6 ~~ivID~Gs~~~k~G~~ 22 (418)
T 1k8k_A 6 PACVVDCGTGYTKLGYA 22 (418)
T ss_dssp CCEEEEECSSEEEEEET
T ss_pred CeEEEECCCCeEEEeeC
Confidence 35899999999999864
No 126
>1kcf_A Hypothetical 30.2 KD protein C25G10.02 in chromosome I; beta-alpha-beta motif, RUVC resolvase family, hydrolase; 2.30A {Schizosaccharomyces pombe} SCOP: a.140.2.1 c.55.3.7
Probab=23.83 E-value=1.2e+02 Score=23.25 Aligned_cols=19 Identities=32% Similarity=0.452 Sum_probs=17.7
Q ss_pred cEEEEecCCceEEEEEEEe
Q psy6344 64 KFLALDLGGTNFRVLIIYL 82 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~L 82 (142)
..|+||+|=-||=.|.++-
T Consensus 41 sIlSID~GikNlAyc~l~~ 59 (258)
T 1kcf_A 41 RVLGIDLGIKNFSYCFASQ 59 (258)
T ss_dssp SEEEEEECSTTEEEEEEEE
T ss_pred cEEEEecCCCceEEEEEcc
Confidence 8999999999999999884
No 127
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=23.20 E-value=63 Score=26.03 Aligned_cols=19 Identities=21% Similarity=0.530 Sum_probs=16.2
Q ss_pred cEEEEecCCceEEEEEEEe
Q psy6344 64 KFLALDLGGTNFRVLIIYL 82 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~L 82 (142)
..++||+|||=.+++..+-
T Consensus 4 ~~~~iDiGGtL~Klvy~~~ 22 (360)
T 2i7n_A 4 PWFGMDIGGTLVKLVYFEP 22 (360)
T ss_dssp CEEEEEECSSEEEEEEEEE
T ss_pred CEEEEEeCCceEEEEEEee
Confidence 3689999999999988665
No 128
>3q1c_A LEE-encoded effector ESPG; VIRA fold, virulence factor, PAK recruitment and activation, activated kinase, signaling protein; 1.60A {Escherichia coli O127} PDB: 4fma_A 4fmd_A* 4fme_A* 4fmc_A* 3pcr_A* 3pcs_A
Probab=22.75 E-value=95 Score=24.59 Aligned_cols=55 Identities=22% Similarity=0.236 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhhccCCCCCc----ccceeccccccCCCCCccccEEEEecCCceEEEEE
Q psy6344 25 MSKLLLAINKGLDKNTNKEA----VVKCFPTYVQDLPNGKEKGKFLALDLGGTNFRVLI 79 (142)
Q Consensus 25 ~~~f~~em~~gL~~~~~~~s----~~~Mlps~v~~~P~G~E~G~fLalDlGGTnlRv~~ 79 (142)
++++..-+.-|+.......+ -...|-.+-..+|..+|-|++.|--..|+.+|+++
T Consensus 13 aekLLkiLtlGl~~p~yt~~Er~~~~~LL~vL~PvlP~~NE~Grv~A~fsDGSsLrIsV 71 (360)
T 3q1c_A 13 AEKLLKVLSFGLWNPTYSRSERQSFQELLTVLEPVYPLPNELGRVSARFSDGSSLRISV 71 (360)
T ss_dssp HHHHHHHHHHCTTCTTCCHHHHHHHHHHHTTCEEECCCTTEEEEEEEECTTSCEEEEEE
T ss_pred HHHHHHHeeccccCcccChHHHHHHHHHHHhcCCCCCCccccchhhhhccCCceEEEEe
Confidence 34444445556654322111 12234444455899999999999999999999976
No 129
>3ixx_D Peptide PR; WEST NIle virus, WNV, immature, fusion loop, ATP- binding, envelope protein, helicase, hydrolase, membrane; 15.00A {West nile virus}
Probab=21.71 E-value=36 Score=21.69 Aligned_cols=16 Identities=38% Similarity=0.659 Sum_probs=11.9
Q ss_pred CCC--CCccccEEEEecC
Q psy6344 56 LPN--GKEKGKFLALDLG 71 (142)
Q Consensus 56 ~P~--G~E~G~fLalDlG 71 (142)
+|+ |+..-.++|+|+|
T Consensus 23 i~t~~G~n~Ctv~A~DvG 40 (80)
T 3ixx_D 23 IPTAAGKNLCIVRAMDVG 40 (80)
T ss_pred eeccCCceeEEEEEEecc
Confidence 455 5656678999999
No 130
>3sm4_A Exonuclease; homologous recombination, DNA repair, recombineering, single annealing; 1.88A {Enterobacteria phage lambda} PDB: 3slp_A 1avq_A
Probab=21.34 E-value=33 Score=25.62 Aligned_cols=29 Identities=21% Similarity=0.496 Sum_probs=17.0
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCccceEEEE
Q psy6344 106 TQLFDHIAECLADFMRDNDVASERLPLGFTF 136 (142)
Q Consensus 106 ~~lFd~ia~~i~~fl~~~~~~~~~l~lGfTF 136 (142)
+++++.|.+.+.+|.+.-. +..-.+||+|
T Consensus 196 ~~~i~~l~~~~~~Fw~~v~--~~~~~~~~~~ 224 (229)
T 3sm4_A 196 EKYMASFDEIVPEFIEKMD--EALAEIGFVF 224 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHH--HHHHHTTCCT
T ss_pred HHHHHHHHHHHHHHHHHHH--HHHHHhCccc
Confidence 5777777777777765421 1122466665
No 131
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=21.25 E-value=67 Score=24.84 Aligned_cols=19 Identities=26% Similarity=0.516 Sum_probs=16.9
Q ss_pred cEEEEecCCceEEEEEEEe
Q psy6344 64 KFLALDLGGTNFRVLIIYL 82 (142)
Q Consensus 64 ~fLalDlGGTnlRv~~V~L 82 (142)
.++.+|+||.++-+++++.
T Consensus 192 ~~~vvDiGggttdi~i~~~ 210 (377)
T 2ych_A 192 VFLVLDIGAESTSLVLLRG 210 (377)
T ss_dssp EEEEEEECSSCEEEEEEET
T ss_pred eEEEEEECCCcEEEEEEEC
Confidence 4799999999999999875
Done!