Query psy6348
Match_columns 333
No_of_seqs 331 out of 2563
Neff 6.9
Searched_HMMs 29240
Date Sat Aug 17 00:07:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6348.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6348hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k5p_A D-3-phosphoglycerate de 100.0 4.1E-70 1.4E-74 537.6 26.7 316 1-328 58-393 (416)
2 3kb6_A D-lactate dehydrogenase 100.0 3.6E-70 1.2E-74 526.1 22.0 265 1-266 42-321 (334)
3 1sc6_A PGDH, D-3-phosphoglycer 100.0 4E-69 1.4E-73 530.6 26.1 286 1-293 47-344 (404)
4 4g2n_A D-isomer specific 2-hyd 100.0 1.8E-68 6.1E-73 515.9 29.1 269 1-277 71-345 (345)
5 4e5n_A Thermostable phosphite 100.0 7.3E-68 2.5E-72 509.4 27.0 273 1-279 45-328 (330)
6 2pi1_A D-lactate dehydrogenase 100.0 2.5E-68 8.4E-73 513.4 22.3 274 1-279 42-330 (334)
7 4dgs_A Dehydrogenase; structur 100.0 1.5E-67 5.2E-72 508.5 25.5 266 1-277 71-340 (340)
8 3gg9_A D-3-phosphoglycerate de 100.0 9E-67 3.1E-71 505.5 27.2 278 1-286 48-342 (352)
9 2yq5_A D-isomer specific 2-hyd 100.0 5.4E-67 1.9E-71 505.2 22.8 273 1-279 45-334 (343)
10 3jtm_A Formate dehydrogenase, 100.0 3.6E-66 1.2E-70 501.1 25.3 274 1-278 62-342 (351)
11 4hy3_A Phosphoglycerate oxidor 100.0 9.9E-66 3.4E-70 499.8 28.2 269 2-279 77-350 (365)
12 1ygy_A PGDH, D-3-phosphoglycer 100.0 3.5E-65 1.2E-69 518.5 32.1 301 1-310 44-345 (529)
13 3evt_A Phosphoglycerate dehydr 100.0 5.4E-66 1.8E-70 495.0 20.2 273 1-282 40-316 (324)
14 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 3.8E-65 1.3E-69 491.2 25.8 263 1-266 67-330 (335)
15 1dxy_A D-2-hydroxyisocaproate 100.0 9.3E-66 3.2E-70 495.3 21.1 274 1-280 44-332 (333)
16 1j4a_A D-LDH, D-lactate dehydr 100.0 1.9E-64 6.4E-69 486.3 26.9 272 1-278 46-332 (333)
17 3hg7_A D-isomer specific 2-hyd 100.0 2.7E-65 9.4E-70 489.9 19.4 269 1-282 47-316 (324)
18 1xdw_A NAD+-dependent (R)-2-hy 100.0 2.1E-64 7.1E-69 485.6 22.1 271 1-277 45-331 (331)
19 1wwk_A Phosphoglycerate dehydr 100.0 1.2E-63 4.1E-68 475.7 26.6 263 1-265 44-307 (307)
20 2nac_A NAD-dependent formate d 100.0 2.7E-63 9.2E-68 486.9 27.2 272 1-278 89-367 (393)
21 2j6i_A Formate dehydrogenase; 100.0 2.4E-63 8.2E-68 483.8 24.2 275 1-278 60-349 (364)
22 2ekl_A D-3-phosphoglycerate de 100.0 9.2E-63 3.2E-67 470.7 25.7 264 1-266 46-310 (313)
23 3pp8_A Glyoxylate/hydroxypyruv 100.0 4E-63 1.4E-67 473.5 20.4 261 1-279 41-312 (315)
24 1gdh_A D-glycerate dehydrogena 100.0 1.5E-61 5.1E-66 463.7 28.3 262 1-266 44-312 (320)
25 1mx3_A CTBP1, C-terminal bindi 100.0 1.1E-61 3.6E-66 469.3 26.5 275 2-278 64-347 (347)
26 3ba1_A HPPR, hydroxyphenylpyru 100.0 1.1E-61 3.8E-66 466.9 26.2 266 1-277 65-333 (333)
27 2cuk_A Glycerate dehydrogenase 100.0 1.3E-61 4.5E-66 462.4 26.3 264 1-276 43-310 (311)
28 2w2k_A D-mandelate dehydrogena 100.0 6.8E-61 2.3E-65 464.0 27.5 276 1-283 51-344 (348)
29 2d0i_A Dehydrogenase; structur 100.0 3E-61 1E-65 463.9 23.9 274 1-282 42-323 (333)
30 1qp8_A Formate dehydrogenase; 100.0 5.5E-61 1.9E-65 456.6 23.7 265 1-281 31-300 (303)
31 2dbq_A Glyoxylate reductase; D 100.0 1.7E-60 5.7E-65 458.8 26.7 273 1-280 45-325 (334)
32 2gcg_A Glyoxylate reductase/hy 100.0 2.9E-59 9.8E-64 449.4 26.9 272 1-278 53-330 (330)
33 3oet_A Erythronate-4-phosphate 100.0 5.6E-59 1.9E-63 453.7 24.1 241 1-266 40-284 (381)
34 3gvx_A Glycerate dehydrogenase 100.0 2.9E-59 9.8E-64 442.0 17.0 247 1-266 34-283 (290)
35 2o4c_A Erythronate-4-phosphate 100.0 1.4E-56 4.7E-61 437.4 22.8 240 1-266 37-281 (380)
36 3d64_A Adenosylhomocysteinase; 100.0 5.8E-40 2E-44 329.0 -2.6 234 13-277 206-446 (494)
37 1v8b_A Adenosylhomocysteinase; 100.0 1.6E-37 5.4E-42 310.4 3.0 220 23-266 194-422 (479)
38 3d4o_A Dipicolinate synthase s 100.0 1.3E-28 4.6E-33 232.0 13.7 163 1-192 58-248 (293)
39 3ce6_A Adenosylhomocysteinase; 99.9 7.1E-29 2.4E-33 249.2 -3.6 225 25-276 214-445 (494)
40 2rir_A Dipicolinate synthase, 99.9 3.1E-26 1.1E-30 216.3 9.1 168 1-192 60-250 (300)
41 2vhw_A Alanine dehydrogenase; 99.9 7.5E-24 2.6E-28 206.5 15.4 214 2-246 68-307 (377)
42 1gtm_A Glutamate dehydrogenase 99.8 1.8E-21 6.2E-26 192.0 5.6 155 93-263 206-385 (419)
43 2eez_A Alanine dehydrogenase; 99.8 1.9E-19 6.5E-24 174.7 10.3 245 1-278 65-342 (369)
44 3h9u_A Adenosylhomocysteinase; 99.8 5.7E-19 1.9E-23 174.0 11.2 155 29-201 155-312 (436)
45 1x13_A NAD(P) transhydrogenase 99.7 1E-18 3.5E-23 171.6 7.5 185 2-195 73-301 (401)
46 3n58_A Adenosylhomocysteinase; 99.7 6.3E-18 2.2E-22 166.6 11.4 154 29-200 191-347 (464)
47 1l7d_A Nicotinamide nucleotide 99.7 9.2E-18 3.1E-22 163.8 10.0 188 1-193 67-301 (384)
48 1gpj_A Glutamyl-tRNA reductase 99.7 1.2E-18 4.1E-23 171.1 0.1 208 23-266 82-325 (404)
49 3gvp_A Adenosylhomocysteinase 99.7 1E-16 3.4E-21 157.7 9.7 153 29-199 164-319 (435)
50 3obb_A Probable 3-hydroxyisobu 99.5 7E-14 2.4E-18 132.1 9.7 114 99-214 4-121 (300)
51 4gbj_A 6-phosphogluconate dehy 99.5 1.2E-13 4.1E-18 130.2 10.1 114 99-214 6-121 (297)
52 3ggo_A Prephenate dehydrogenas 99.5 1.3E-12 4.4E-17 124.1 16.9 148 95-248 30-186 (314)
53 4dll_A 2-hydroxy-3-oxopropiona 99.4 1.4E-13 4.7E-18 130.7 8.9 113 96-208 29-144 (320)
54 2g5c_A Prephenate dehydrogenas 99.4 2.8E-12 9.5E-17 118.8 16.1 141 99-243 2-150 (281)
55 3l6d_A Putative oxidoreductase 99.4 2E-13 6.9E-18 128.8 8.3 115 94-208 5-121 (306)
56 4ezb_A Uncharacterized conserv 99.4 6.4E-13 2.2E-17 126.2 11.7 138 77-219 5-152 (317)
57 3doj_A AT3G25530, dehydrogenas 99.4 3.4E-13 1.2E-17 127.4 9.8 116 93-208 16-135 (310)
58 3qha_A Putative oxidoreductase 99.4 6.7E-13 2.3E-17 124.5 10.4 109 98-208 15-125 (296)
59 3qsg_A NAD-binding phosphogluc 99.4 9.5E-13 3.3E-17 124.6 10.6 126 78-205 2-134 (312)
60 3pef_A 6-phosphogluconate dehy 99.4 9.6E-13 3.3E-17 122.6 9.4 110 99-208 2-115 (287)
61 1c1d_A L-phenylalanine dehydro 99.4 1.2E-12 4.1E-17 126.3 10.3 114 93-214 169-285 (355)
62 4e21_A 6-phosphogluconate dehy 99.4 1.7E-12 5.8E-17 125.6 10.6 119 96-216 20-143 (358)
63 3g0o_A 3-hydroxyisobutyrate de 99.4 1.3E-12 4.3E-17 122.9 9.5 111 98-208 7-122 (303)
64 3pdu_A 3-hydroxyisobutyrate de 99.3 9.4E-13 3.2E-17 122.6 6.9 110 99-208 2-115 (287)
65 2h78_A Hibadh, 3-hydroxyisobut 99.3 3.2E-12 1.1E-16 119.7 9.3 109 99-207 4-116 (302)
66 1np3_A Ketol-acid reductoisome 99.3 7E-13 2.4E-17 127.0 4.7 139 94-242 12-156 (338)
67 4e12_A Diketoreductase; oxidor 99.3 2.4E-11 8.1E-16 113.3 14.2 130 99-241 5-161 (283)
68 3b1f_A Putative prephenate deh 99.3 2.5E-11 8.6E-16 112.8 13.1 143 98-244 6-159 (290)
69 2d5c_A AROE, shikimate 5-dehyd 99.3 7.1E-12 2.4E-16 115.5 8.7 157 11-206 61-222 (263)
70 3ond_A Adenosylhomocysteinase; 99.3 1.8E-11 6.3E-16 122.2 11.3 145 29-191 209-355 (488)
71 3dtt_A NADP oxidoreductase; st 99.2 9.2E-12 3.2E-16 113.7 7.0 102 85-189 6-125 (245)
72 2pv7_A T-protein [includes: ch 99.2 4.2E-11 1.4E-15 112.5 11.7 138 76-240 4-142 (298)
73 3p2y_A Alanine dehydrogenase/p 99.2 3.1E-11 1E-15 117.4 9.7 98 95-193 181-309 (381)
74 3ktd_A Prephenate dehydrogenas 99.2 1.7E-11 5.8E-16 117.8 7.9 138 99-241 9-154 (341)
75 1vpd_A Tartronate semialdehyde 99.2 3.8E-11 1.3E-15 111.8 9.0 109 99-207 6-118 (299)
76 4gwg_A 6-phosphogluconate dehy 99.2 4.1E-11 1.4E-15 120.1 9.5 118 98-216 4-131 (484)
77 3cky_A 2-hydroxymethyl glutara 99.2 3.8E-11 1.3E-15 111.9 8.6 109 99-207 5-117 (301)
78 2cvz_A Dehydrogenase, 3-hydrox 99.2 4.9E-11 1.7E-15 110.3 9.2 106 99-206 2-108 (289)
79 1yb4_A Tartronic semialdehyde 99.2 3.8E-11 1.3E-15 111.4 8.3 107 99-206 4-114 (295)
80 2f1k_A Prephenate dehydrogenas 99.2 6.2E-10 2.1E-14 102.6 15.8 136 99-242 1-143 (279)
81 4dio_A NAD(P) transhydrogenase 99.2 6.2E-11 2.1E-15 116.1 9.3 100 95-195 187-321 (405)
82 2gf2_A Hibadh, 3-hydroxyisobut 99.2 4E-11 1.4E-15 111.4 7.7 106 99-204 1-110 (296)
83 3fr7_A Putative ketol-acid red 99.2 3.4E-11 1.2E-15 119.9 7.4 105 82-190 38-156 (525)
84 2hk9_A Shikimate dehydrogenase 99.2 4.2E-11 1.4E-15 111.3 7.5 151 2-189 66-222 (275)
85 3k6j_A Protein F01G10.3, confi 99.1 7.8E-10 2.7E-14 110.1 16.7 152 52-216 12-191 (460)
86 2zyd_A 6-phosphogluconate dehy 99.1 1E-10 3.5E-15 117.1 10.5 112 96-208 13-133 (480)
87 1zej_A HBD-9, 3-hydroxyacyl-CO 99.1 3.4E-10 1.2E-14 106.5 12.6 113 96-216 10-132 (293)
88 2p4q_A 6-phosphogluconate dehy 99.1 2.1E-10 7E-15 115.5 11.2 109 98-207 10-128 (497)
89 2uyy_A N-PAC protein; long-cha 99.1 1.4E-10 4.6E-15 109.2 9.1 109 99-207 31-143 (316)
90 1i36_A Conserved hypothetical 99.1 1.5E-10 5.1E-15 106.0 9.1 102 99-205 1-105 (264)
91 2yjz_A Metalloreductase steap4 98.7 9.3E-12 3.2E-16 110.9 0.0 94 96-193 17-110 (201)
92 2dpo_A L-gulonate 3-dehydrogen 99.1 7.8E-10 2.7E-14 105.3 13.1 116 98-216 6-148 (319)
93 3d1l_A Putative NADP oxidoredu 99.1 2.4E-10 8.2E-15 104.8 8.1 108 93-204 5-116 (266)
94 2iz1_A 6-phosphogluconate dehy 99.1 4.3E-10 1.5E-14 112.4 10.5 109 99-208 6-123 (474)
95 2pgd_A 6-phosphogluconate dehy 99.0 4.2E-10 1.4E-14 112.7 9.9 109 99-208 3-121 (482)
96 2q3e_A UDP-glucose 6-dehydroge 99.0 6E-10 2E-14 111.1 8.9 136 99-236 6-181 (467)
97 1leh_A Leucine dehydrogenase; 99.0 6.3E-10 2.2E-14 107.7 8.7 107 95-208 170-279 (364)
98 3c24_A Putative oxidoreductase 99.0 8E-10 2.7E-14 102.6 8.7 92 99-192 12-105 (286)
99 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.0 6.5E-10 2.2E-14 111.2 8.5 109 99-208 2-123 (478)
100 2raf_A Putative dinucleotide-b 98.9 2.8E-09 9.5E-14 95.0 10.1 80 94-192 15-94 (209)
101 2vns_A Metalloreductase steap3 98.9 1.1E-09 3.8E-14 98.0 6.5 94 97-194 27-121 (215)
102 1f0y_A HCDH, L-3-hydroxyacyl-C 98.9 2.3E-08 7.8E-13 93.6 15.4 115 99-216 16-161 (302)
103 3pid_A UDP-glucose 6-dehydroge 98.9 9.9E-09 3.4E-13 101.4 13.1 114 92-207 30-172 (432)
104 1pjc_A Protein (L-alanine dehy 98.8 2.8E-08 9.4E-13 95.8 13.8 181 2-189 67-268 (361)
105 3tri_A Pyrroline-5-carboxylate 98.8 1.3E-08 4.6E-13 94.6 11.2 103 98-204 3-112 (280)
106 2izz_A Pyrroline-5-carboxylate 98.8 5.6E-09 1.9E-13 98.9 7.9 104 97-204 21-132 (322)
107 3oj0_A Glutr, glutamyl-tRNA re 98.8 4.5E-09 1.5E-13 87.7 6.4 88 98-191 21-113 (144)
108 3gt0_A Pyrroline-5-carboxylate 98.8 4.2E-09 1.4E-13 95.8 6.4 102 99-204 3-111 (247)
109 1yqg_A Pyrroline-5-carboxylate 98.8 1.2E-08 4.2E-13 92.9 9.0 99 99-205 1-103 (263)
110 4a7p_A UDP-glucose dehydrogena 98.8 3.2E-08 1.1E-12 98.2 12.1 105 99-204 9-145 (446)
111 2ahr_A Putative pyrroline carb 98.8 1.5E-08 5.2E-13 92.3 9.0 99 99-205 4-105 (259)
112 3mog_A Probable 3-hydroxybutyr 98.8 4.1E-08 1.4E-12 98.3 12.3 117 98-219 5-148 (483)
113 1mv8_A GMD, GDP-mannose 6-dehy 98.8 2E-08 6.8E-13 99.1 9.6 105 99-204 1-140 (436)
114 3gg2_A Sugar dehydrogenase, UD 98.7 3.5E-08 1.2E-12 98.0 10.6 105 99-204 3-138 (450)
115 2ew2_A 2-dehydropantoate 2-red 98.7 5.5E-08 1.9E-12 90.2 10.7 107 99-208 4-127 (316)
116 2i99_A MU-crystallin homolog; 98.7 2.6E-08 9E-13 94.1 8.2 109 97-214 134-249 (312)
117 1jay_A Coenzyme F420H2:NADP+ o 98.7 3.6E-08 1.2E-12 86.9 7.5 114 99-219 1-136 (212)
118 1bg6_A N-(1-D-carboxylethyl)-L 98.7 9.8E-08 3.3E-12 90.5 10.9 103 99-204 5-124 (359)
119 1zcj_A Peroxisomal bifunctiona 98.7 3.2E-07 1.1E-11 91.3 14.9 115 98-216 37-175 (463)
120 3dfu_A Uncharacterized protein 98.6 1.1E-07 3.7E-12 86.5 9.9 70 98-188 6-75 (232)
121 3k96_A Glycerol-3-phosphate de 98.6 6.4E-08 2.2E-12 93.3 8.6 96 97-194 28-139 (356)
122 1wdk_A Fatty oxidation complex 98.6 1.7E-07 5.8E-12 98.1 12.1 115 98-216 314-454 (715)
123 1txg_A Glycerol-3-phosphate de 98.6 8.5E-08 2.9E-12 90.2 8.8 103 99-204 1-124 (335)
124 1dlj_A UDP-glucose dehydrogena 98.6 1.3E-07 4.4E-12 92.5 10.1 106 99-207 1-136 (402)
125 3ulk_A Ketol-acid reductoisome 98.6 1.1E-07 3.8E-12 93.4 9.4 95 94-191 33-134 (491)
126 2y0c_A BCEC, UDP-glucose dehyd 98.6 1.3E-07 4.3E-12 94.7 10.0 106 98-204 8-144 (478)
127 2rcy_A Pyrroline carboxylate r 98.6 5.6E-08 1.9E-12 88.5 6.7 98 98-205 4-106 (262)
128 3ojo_A CAP5O; rossmann fold, c 98.6 1.4E-07 4.7E-12 93.2 9.9 107 96-202 9-143 (431)
129 3g79_A NDP-N-acetyl-D-galactos 98.6 2.1E-07 7.2E-12 93.1 11.3 103 99-201 19-160 (478)
130 4huj_A Uncharacterized protein 98.6 1.1E-07 3.9E-12 85.0 7.8 90 98-191 23-116 (220)
131 1z82_A Glycerol-3-phosphate de 98.6 1.5E-07 5.1E-12 89.3 8.8 86 98-190 14-113 (335)
132 1y81_A Conserved hypothetical 98.5 2.4E-07 8.2E-12 77.5 8.9 102 96-208 12-118 (138)
133 2wtb_A MFP2, fatty acid multif 98.5 4.5E-07 1.6E-11 95.0 13.0 114 99-216 313-452 (725)
134 1x0v_A GPD-C, GPDH-C, glycerol 98.5 1.5E-07 5.2E-12 89.4 8.6 92 99-192 9-128 (354)
135 2o3j_A UDP-glucose 6-dehydroge 98.5 1.4E-07 4.7E-12 94.4 8.4 105 99-204 10-151 (481)
136 1evy_A Glycerol-3-phosphate de 98.5 5.9E-08 2E-12 93.0 5.0 92 100-192 17-128 (366)
137 1yj8_A Glycerol-3-phosphate de 98.5 1.7E-07 5.9E-12 90.3 7.9 91 99-191 22-144 (375)
138 1ks9_A KPA reductase;, 2-dehyd 98.5 2.1E-07 7.3E-12 85.3 7.1 103 99-204 1-112 (291)
139 2qyt_A 2-dehydropantoate 2-red 98.5 1.3E-07 4.4E-12 88.1 5.6 105 99-206 9-134 (317)
140 2dc1_A L-aspartate dehydrogena 98.5 4.6E-07 1.6E-11 81.8 9.0 98 99-207 1-103 (236)
141 3c85_A Putative glutathione-re 98.4 3.5E-07 1.2E-11 78.9 7.7 93 94-188 35-139 (183)
142 3ghy_A Ketopantoate reductase 98.4 4.2E-07 1.4E-11 86.3 8.5 108 98-208 3-142 (335)
143 2duw_A Putative COA-binding pr 98.4 4.2E-07 1.4E-11 76.6 6.9 102 98-208 13-119 (145)
144 3i83_A 2-dehydropantoate 2-red 98.4 2E-06 6.8E-11 81.1 12.1 106 99-208 3-124 (320)
145 3phh_A Shikimate dehydrogenase 98.4 1E-06 3.5E-11 81.8 9.5 93 98-191 118-212 (269)
146 3ado_A Lambda-crystallin; L-gu 98.3 2.8E-06 9.5E-11 80.7 10.9 132 98-240 6-164 (319)
147 2g1u_A Hypothetical protein TM 98.3 2.2E-06 7.5E-11 72.1 9.0 98 92-191 13-121 (155)
148 3hn2_A 2-dehydropantoate 2-red 98.3 3.7E-06 1.3E-10 78.9 11.3 107 99-210 3-124 (312)
149 2egg_A AROE, shikimate 5-dehyd 98.3 2.1E-06 7.3E-11 80.5 9.2 94 94-190 137-242 (297)
150 2i76_A Hypothetical protein; N 98.3 2.7E-07 9.2E-12 85.3 2.9 86 99-191 3-92 (276)
151 3don_A Shikimate dehydrogenase 98.3 8E-07 2.7E-11 82.8 6.1 95 93-190 112-212 (277)
152 3hwr_A 2-dehydropantoate 2-red 98.3 3.2E-06 1.1E-10 79.7 10.0 103 96-203 17-134 (318)
153 4a26_A Putative C-1-tetrahydro 98.3 1.8E-06 6.1E-11 81.1 8.1 81 93-192 160-243 (300)
154 3l07_A Bifunctional protein fo 98.2 2.8E-06 9.5E-11 79.3 8.6 80 93-191 156-236 (285)
155 1lss_A TRK system potassium up 98.2 7.4E-06 2.5E-10 66.4 10.0 88 98-187 4-102 (140)
156 1a4i_A Methylenetetrahydrofola 98.2 4.4E-06 1.5E-10 78.5 9.7 82 93-193 160-242 (301)
157 3p2o_A Bifunctional protein fo 98.2 3.2E-06 1.1E-10 78.9 8.7 81 93-192 155-236 (285)
158 3fwz_A Inner membrane protein 98.2 2.3E-06 8E-11 70.8 7.0 89 98-188 7-105 (140)
159 1b0a_A Protein (fold bifunctio 98.2 2.2E-06 7.6E-11 80.0 7.4 81 93-192 154-235 (288)
160 4a5o_A Bifunctional protein fo 98.2 3.7E-06 1.3E-10 78.5 8.8 81 93-192 156-237 (286)
161 2c2x_A Methylenetetrahydrofola 98.2 3.7E-06 1.3E-10 78.3 8.7 81 93-192 153-236 (281)
162 3ngx_A Bifunctional protein fo 98.2 2.9E-06 9.9E-11 78.8 7.6 77 96-191 148-225 (276)
163 3u62_A Shikimate dehydrogenase 98.2 3.8E-06 1.3E-10 77.1 7.9 102 95-205 106-214 (253)
164 3ic5_A Putative saccharopine d 98.1 6.2E-06 2.1E-10 64.9 8.0 87 97-188 4-100 (118)
165 3vtf_A UDP-glucose 6-dehydroge 98.1 5.1E-06 1.7E-10 82.3 9.0 139 97-236 20-194 (444)
166 1edz_A 5,10-methylenetetrahydr 98.1 1.6E-06 5.3E-11 82.4 4.8 92 92-190 171-277 (320)
167 3hdj_A Probable ornithine cycl 98.1 7.6E-06 2.6E-10 77.4 9.3 90 97-192 120-217 (313)
168 3llv_A Exopolyphosphatase-rela 98.1 8.8E-06 3E-10 66.9 8.4 87 97-185 5-101 (141)
169 3ego_A Probable 2-dehydropanto 98.1 1.3E-05 4.3E-10 75.3 9.5 104 99-208 3-118 (307)
170 3o8q_A Shikimate 5-dehydrogena 98.1 5.8E-06 2E-10 77.1 7.1 71 93-163 121-198 (281)
171 1p77_A Shikimate 5-dehydrogena 98.0 1.3E-05 4.5E-10 74.0 9.2 71 93-163 114-191 (272)
172 2z2v_A Hypothetical protein PH 98.0 9.1E-06 3.1E-10 78.4 8.1 108 94-208 12-127 (365)
173 3pwz_A Shikimate dehydrogenase 98.0 1.9E-05 6.3E-10 73.3 9.9 70 93-162 115-191 (272)
174 1x7d_A Ornithine cyclodeaminas 98.0 1E-05 3.5E-10 77.7 8.3 90 97-190 128-228 (350)
175 2hmt_A YUAA protein; RCK, KTN, 98.0 7E-06 2.4E-10 66.8 6.2 93 96-190 4-106 (144)
176 2ewd_A Lactate dehydrogenase,; 98.0 2E-05 6.9E-10 74.2 9.9 111 98-210 4-145 (317)
177 3c7a_A Octopine dehydrogenase; 98.0 1.2E-05 4E-10 78.0 8.3 87 99-187 3-115 (404)
178 1nyt_A Shikimate 5-dehydrogena 98.0 3E-05 1E-09 71.5 10.1 71 94-164 115-192 (271)
179 1hyh_A L-hicdh, L-2-hydroxyiso 97.9 3.2E-05 1.1E-09 72.5 8.9 65 99-164 2-81 (309)
180 2d59_A Hypothetical protein PH 97.9 9.4E-05 3.2E-09 61.9 10.6 100 98-208 22-126 (144)
181 1iuk_A Hypothetical protein TT 97.9 4.7E-05 1.6E-09 63.6 8.3 103 97-208 12-119 (140)
182 4hkt_A Inositol 2-dehydrogenas 97.9 4.8E-05 1.7E-09 71.6 9.5 67 99-165 4-76 (331)
183 1omo_A Alanine dehydrogenase; 97.9 3.2E-05 1.1E-09 73.3 8.2 87 97-190 124-219 (322)
184 1id1_A Putative potassium chan 97.8 4.6E-05 1.6E-09 63.6 8.2 88 98-187 3-104 (153)
185 3zwc_A Peroxisomal bifunctiona 97.8 0.00011 3.7E-09 77.2 12.2 132 99-241 317-471 (742)
186 3uuw_A Putative oxidoreductase 97.8 4E-05 1.4E-09 71.4 8.2 105 98-207 6-118 (308)
187 1xea_A Oxidoreductase, GFO/IDH 97.8 7.1E-05 2.4E-09 70.2 9.5 105 99-208 3-116 (323)
188 3g17_A Similar to 2-dehydropan 97.8 5.8E-06 2E-10 76.9 1.8 91 99-191 3-99 (294)
189 3euw_A MYO-inositol dehydrogen 97.8 6.4E-05 2.2E-09 71.1 8.7 67 99-165 5-78 (344)
190 1tlt_A Putative oxidoreductase 97.7 8.9E-05 3E-09 69.4 9.3 105 99-208 6-118 (319)
191 1a5z_A L-lactate dehydrogenase 97.7 9.9E-05 3.4E-09 69.6 9.7 110 99-210 1-140 (319)
192 1guz_A Malate dehydrogenase; o 97.7 0.00014 4.7E-09 68.4 10.4 110 99-212 1-144 (310)
193 1nvt_A Shikimate 5'-dehydrogen 97.7 6.2E-05 2.1E-09 69.9 7.9 93 94-189 124-231 (287)
194 4fgw_A Glycerol-3-phosphate de 97.7 7.5E-05 2.6E-09 72.7 8.6 90 100-191 36-154 (391)
195 2v6b_A L-LDH, L-lactate dehydr 97.7 6.8E-05 2.3E-09 70.4 8.0 112 99-210 1-138 (304)
196 2glx_A 1,5-anhydro-D-fructose 97.7 7.4E-05 2.5E-09 70.1 8.2 103 100-207 2-114 (332)
197 2ho3_A Oxidoreductase, GFO/IDH 97.7 8.3E-05 2.8E-09 69.8 8.4 64 100-163 3-73 (325)
198 3fbt_A Chorismate mutase and s 97.7 5.8E-05 2E-09 70.4 7.0 66 93-162 117-188 (282)
199 3q2i_A Dehydrogenase; rossmann 97.7 5.2E-05 1.8E-09 72.1 6.6 66 99-164 14-87 (354)
200 2hjr_A Malate dehydrogenase; m 97.7 0.00023 7.7E-09 67.6 10.7 111 99-211 15-156 (328)
201 1vl6_A Malate oxidoreductase; 97.7 0.00033 1.1E-08 68.0 11.9 123 44-192 159-298 (388)
202 3db2_A Putative NADPH-dependen 97.6 6.5E-05 2.2E-09 71.4 6.8 67 99-165 6-79 (354)
203 3rc1_A Sugar 3-ketoreductase; 97.6 0.00011 3.6E-09 70.1 8.2 68 97-164 26-101 (350)
204 3bio_A Oxidoreductase, GFO/IDH 97.6 0.0001 3.5E-09 69.1 7.9 101 99-207 10-118 (304)
205 1ldn_A L-lactate dehydrogenase 97.6 8.3E-05 2.8E-09 70.2 7.0 92 98-189 6-124 (316)
206 3l4b_C TRKA K+ channel protien 97.6 0.00013 4.3E-09 64.6 7.8 87 99-187 1-98 (218)
207 3cea_A MYO-inositol 2-dehydrog 97.6 0.00016 5.4E-09 68.2 8.9 105 99-208 9-125 (346)
208 1pzg_A LDH, lactate dehydrogen 97.6 0.00018 6E-09 68.4 9.2 114 98-211 9-157 (331)
209 3e18_A Oxidoreductase; dehydro 97.6 8.4E-05 2.9E-09 71.0 7.0 66 99-164 6-77 (359)
210 3e9m_A Oxidoreductase, GFO/IDH 97.6 0.00012 4.1E-09 69.0 8.0 67 99-165 6-80 (330)
211 2qrj_A Saccharopine dehydrogen 97.6 6.7E-05 2.3E-09 73.0 6.2 83 97-188 213-300 (394)
212 1t2d_A LDH-P, L-lactate dehydr 97.6 0.0003 1E-08 66.6 10.4 61 99-160 5-80 (322)
213 3l9w_A Glutathione-regulated p 97.6 0.00013 4.5E-09 71.5 8.1 91 98-190 4-104 (413)
214 3jyo_A Quinate/shikimate dehyd 97.6 0.00012 4.1E-09 68.2 7.4 69 94-162 123-204 (283)
215 3ezy_A Dehydrogenase; structur 97.5 0.0001 3.6E-09 69.7 6.6 66 99-164 3-76 (344)
216 3dfz_A SIRC, precorrin-2 dehyd 97.5 0.00034 1.2E-08 63.0 9.4 90 93-188 26-121 (223)
217 1f06_A MESO-diaminopimelate D- 97.5 0.00018 6.1E-09 67.9 7.9 101 99-206 4-110 (320)
218 3tnl_A Shikimate dehydrogenase 97.5 0.00028 9.6E-09 66.8 9.2 70 93-162 149-236 (315)
219 3evn_A Oxidoreductase, GFO/IDH 97.5 0.0002 7E-09 67.3 7.9 66 99-164 6-79 (329)
220 3e82_A Putative oxidoreductase 97.5 0.00028 9.7E-09 67.5 8.7 103 99-207 8-119 (364)
221 3c1a_A Putative oxidoreductase 97.5 9.3E-05 3.2E-09 69.2 5.0 102 99-207 11-121 (315)
222 2a9f_A Putative malic enzyme ( 97.4 0.0003 1E-08 68.3 8.5 123 44-192 155-293 (398)
223 1j5p_A Aspartate dehydrogenase 97.4 0.00027 9.1E-09 64.9 7.7 98 97-207 11-113 (253)
224 3qy9_A DHPR, dihydrodipicolina 97.4 0.00054 1.8E-08 62.4 9.6 80 99-190 4-85 (243)
225 1lld_A L-lactate dehydrogenase 97.4 0.00082 2.8E-08 62.6 11.0 93 98-191 7-127 (319)
226 2aef_A Calcium-gated potassium 97.4 0.00031 1.1E-08 62.6 7.7 86 98-187 9-104 (234)
227 3mz0_A Inositol 2-dehydrogenas 97.4 0.00021 7.3E-09 67.5 7.0 67 99-165 3-79 (344)
228 2dvm_A Malic enzyme, 439AA lon 97.4 0.00041 1.4E-08 68.4 8.7 109 93-206 181-312 (439)
229 3t4e_A Quinate/shikimate dehyd 97.4 0.00023 8E-09 67.2 6.6 70 93-162 143-230 (312)
230 1ur5_A Malate dehydrogenase; o 97.4 0.0004 1.4E-08 65.2 8.2 89 99-189 3-120 (309)
231 1ydw_A AX110P-like protein; st 97.4 0.00054 1.9E-08 65.2 9.3 105 99-208 7-124 (362)
232 1pg5_A Aspartate carbamoyltran 97.4 0.0016 5.5E-08 61.1 12.2 129 39-188 110-260 (299)
233 2p2s_A Putative oxidoreductase 97.4 0.00066 2.3E-08 63.8 9.7 104 99-207 5-118 (336)
234 3ec7_A Putative dehydrogenase; 97.4 0.00033 1.1E-08 66.8 7.6 67 98-164 23-99 (357)
235 4a7p_A UDP-glucose dehydrogena 97.3 0.00043 1.5E-08 68.5 8.5 102 93-198 317-430 (446)
236 1h6d_A Precursor form of gluco 97.3 0.00033 1.1E-08 68.7 7.4 103 99-206 84-201 (433)
237 2i6u_A Otcase, ornithine carba 97.3 0.0034 1.2E-07 59.1 13.9 128 40-188 111-265 (307)
238 2ef0_A Ornithine carbamoyltran 97.3 0.0028 9.7E-08 59.5 12.9 128 40-188 117-261 (301)
239 4fcc_A Glutamate dehydrogenase 97.3 0.0016 5.4E-08 64.4 11.6 114 93-214 230-373 (450)
240 1dxh_A Ornithine carbamoyltran 97.3 0.0024 8.2E-08 60.8 12.5 129 40-188 117-274 (335)
241 1y6j_A L-lactate dehydrogenase 97.3 0.00059 2E-08 64.4 8.2 115 98-213 7-152 (318)
242 3q2o_A Phosphoribosylaminoimid 97.3 0.00029 1E-08 67.7 6.2 66 94-159 10-82 (389)
243 3gg2_A Sugar dehydrogenase, UD 97.3 0.00081 2.8E-08 66.5 9.3 95 93-190 313-420 (450)
244 4b4u_A Bifunctional protein fo 97.2 0.00079 2.7E-08 63.1 8.4 80 92-190 173-253 (303)
245 3nep_X Malate dehydrogenase; h 97.2 0.0012 4.1E-08 62.3 9.6 113 99-211 1-143 (314)
246 2i6t_A Ubiquitin-conjugating e 97.2 0.0012 4.2E-08 61.9 9.6 111 98-210 14-149 (303)
247 1jw9_B Molybdopterin biosynthe 97.2 0.00031 1.1E-08 64.0 5.3 90 94-187 27-152 (249)
248 3ohs_X Trans-1,2-dihydrobenzen 97.2 0.00046 1.6E-08 65.0 6.3 66 99-164 3-78 (334)
249 3pqe_A L-LDH, L-lactate dehydr 97.2 0.0025 8.7E-08 60.4 11.4 114 97-210 4-146 (326)
250 2nu8_A Succinyl-COA ligase [AD 97.2 0.00063 2.2E-08 63.4 7.0 104 98-208 7-117 (288)
251 3lk7_A UDP-N-acetylmuramoylala 97.2 0.00044 1.5E-08 68.1 6.3 112 94-205 5-137 (451)
252 3p7m_A Malate dehydrogenase; p 97.2 0.0028 9.7E-08 59.9 11.6 115 97-211 4-147 (321)
253 1ez4_A Lactate dehydrogenase; 97.1 0.00084 2.9E-08 63.4 7.8 111 99-210 6-145 (318)
254 2axq_A Saccharopine dehydrogen 97.1 0.00049 1.7E-08 68.5 6.4 93 91-188 16-119 (467)
255 3r7f_A Aspartate carbamoyltran 97.1 0.0022 7.6E-08 60.3 10.5 126 40-188 109-250 (304)
256 1duv_G Octase-1, ornithine tra 97.1 0.0024 8.3E-08 60.7 10.8 130 40-188 116-274 (333)
257 3d0o_A L-LDH 1, L-lactate dehy 97.1 0.0013 4.5E-08 61.9 8.9 113 98-210 6-147 (317)
258 1yqd_A Sinapyl alcohol dehydro 97.1 0.00075 2.6E-08 64.4 7.3 88 97-189 187-283 (366)
259 1npy_A Hypothetical shikimate 97.1 0.0014 4.8E-08 60.5 8.8 65 97-163 118-186 (271)
260 3abi_A Putative uncharacterize 97.1 0.0014 4.7E-08 62.7 9.0 87 96-188 14-108 (365)
261 1pvv_A Otcase, ornithine carba 97.1 0.0056 1.9E-07 57.8 12.9 128 40-188 118-271 (315)
262 3e8x_A Putative NAD-dependent 97.1 0.0022 7.5E-08 56.6 9.7 70 94-163 17-95 (236)
263 3i23_A Oxidoreductase, GFO/IDH 97.1 0.00098 3.3E-08 63.2 7.8 66 99-164 3-77 (349)
264 2q3e_A UDP-glucose 6-dehydroge 97.1 0.0021 7.2E-08 63.6 10.3 94 95-190 326-444 (467)
265 1vlv_A Otcase, ornithine carba 97.1 0.0052 1.8E-07 58.3 12.3 128 40-188 130-285 (325)
266 4had_A Probable oxidoreductase 97.1 0.0008 2.7E-08 63.5 6.7 66 99-164 24-98 (350)
267 3fef_A Putative glucosidase LP 97.0 0.00089 3.1E-08 66.3 7.2 112 97-209 4-167 (450)
268 3ldh_A Lactate dehydrogenase; 97.0 0.00068 2.3E-08 64.5 6.1 93 97-190 20-140 (330)
269 2zqz_A L-LDH, L-lactate dehydr 97.0 0.0011 3.7E-08 62.9 7.4 112 98-210 9-149 (326)
270 3f4l_A Putative oxidoreductase 97.0 0.00073 2.5E-08 63.9 6.1 67 99-165 3-78 (345)
271 3m2t_A Probable dehydrogenase; 97.0 0.00055 1.9E-08 65.3 5.2 64 99-162 6-78 (359)
272 3vku_A L-LDH, L-lactate dehydr 97.0 0.0013 4.6E-08 62.3 7.9 94 97-190 8-127 (326)
273 3two_A Mannitol dehydrogenase; 97.0 0.002 6.7E-08 60.9 9.0 88 97-189 176-266 (348)
274 3kux_A Putative oxidoreductase 97.0 0.00068 2.3E-08 64.3 5.6 66 99-165 8-80 (352)
275 4amu_A Ornithine carbamoyltran 97.0 0.0042 1.4E-07 59.8 11.0 128 40-188 143-300 (365)
276 4f2g_A Otcase 1, ornithine car 97.0 0.006 2E-07 57.5 11.7 128 40-188 117-264 (309)
277 3gvi_A Malate dehydrogenase; N 97.0 0.0052 1.8E-07 58.2 11.2 116 96-211 5-149 (324)
278 1ff9_A Saccharopine reductase; 96.9 0.0026 8.9E-08 62.8 9.4 67 97-163 2-79 (450)
279 3tl2_A Malate dehydrogenase; c 96.9 0.0037 1.2E-07 59.0 10.0 115 97-211 7-152 (315)
280 3eag_A UDP-N-acetylmuramate:L- 96.9 0.0023 7.9E-08 60.3 8.6 108 98-205 4-133 (326)
281 1oju_A MDH, malate dehydrogena 96.9 0.0027 9.3E-08 59.3 8.9 113 99-213 1-147 (294)
282 3g79_A NDP-N-acetyl-D-galactos 96.9 0.0021 7.1E-08 64.2 8.5 98 94-198 349-458 (478)
283 2nvw_A Galactose/lactose metab 96.9 0.0021 7.1E-08 64.0 8.4 66 98-163 39-119 (479)
284 2vt3_A REX, redox-sensing tran 96.9 0.00054 1.8E-08 61.3 3.7 64 99-162 86-155 (215)
285 3aog_A Glutamate dehydrogenase 96.9 0.0053 1.8E-07 60.5 10.9 113 93-214 230-363 (440)
286 3gdo_A Uncharacterized oxidore 96.9 0.0016 5.5E-08 61.9 7.0 66 99-165 6-78 (358)
287 4fb5_A Probable oxidoreductase 96.9 0.0016 5.4E-08 61.8 6.9 67 98-164 25-106 (393)
288 2cdc_A Glucose dehydrogenase g 96.9 0.0014 4.7E-08 62.5 6.4 91 95-189 178-279 (366)
289 1ml4_A Aspartate transcarbamoy 96.8 0.0038 1.3E-07 58.8 9.3 129 39-188 116-268 (308)
290 4ep1_A Otcase, ornithine carba 96.8 0.012 4.1E-07 56.1 12.7 129 39-188 141-294 (340)
291 1oth_A Protein (ornithine tran 96.8 0.0076 2.6E-07 57.0 11.3 128 40-188 118-271 (321)
292 2y0c_A BCEC, UDP-glucose dehyd 96.8 0.0038 1.3E-07 62.1 9.7 99 94-196 324-445 (478)
293 3tum_A Shikimate dehydrogenase 96.8 0.0062 2.1E-07 56.2 10.5 70 93-162 120-197 (269)
294 3tpf_A Otcase, ornithine carba 96.8 0.024 8.1E-07 53.3 14.6 129 39-188 107-262 (307)
295 1lc0_A Biliverdin reductase A; 96.8 0.0015 5.2E-08 60.6 6.4 101 99-207 8-117 (294)
296 1oi7_A Succinyl-COA synthetase 96.8 0.0012 4E-08 61.6 5.6 104 98-208 7-117 (288)
297 3moi_A Probable dehydrogenase; 96.8 0.00084 2.9E-08 64.6 4.6 66 99-164 3-76 (387)
298 4a8t_A Putrescine carbamoyltra 96.8 0.02 6.7E-07 54.6 14.0 131 39-188 134-292 (339)
299 3d6n_B Aspartate carbamoyltran 96.8 0.0088 3E-07 55.8 11.3 101 40-162 108-214 (291)
300 2w37_A Ornithine carbamoyltran 96.8 0.0051 1.8E-07 59.0 9.7 129 40-189 139-296 (359)
301 1b7g_O Protein (glyceraldehyde 96.7 0.0022 7.6E-08 61.1 6.9 64 100-163 3-88 (340)
302 2fp4_A Succinyl-COA ligase [GD 96.7 0.0024 8.1E-08 60.0 7.0 107 95-208 10-125 (305)
303 1pjq_A CYSG, siroheme synthase 96.7 0.0032 1.1E-07 62.2 8.3 71 93-164 7-83 (457)
304 3btv_A Galactose/lactose metab 96.7 0.002 6.8E-08 63.2 6.6 65 99-163 21-100 (438)
305 4a8p_A Putrescine carbamoyltra 96.7 0.022 7.5E-07 54.5 13.6 131 39-188 112-270 (355)
306 2bma_A Glutamate dehydrogenase 96.7 0.0042 1.4E-07 61.6 8.8 114 93-214 247-391 (470)
307 2tmg_A Protein (glutamate dehy 96.7 0.014 4.7E-07 57.1 12.4 115 92-215 203-339 (415)
308 3ew7_A LMO0794 protein; Q8Y8U8 96.7 0.0074 2.5E-07 52.0 9.4 93 99-191 1-105 (221)
309 3orq_A N5-carboxyaminoimidazol 96.7 0.0018 6.2E-08 62.1 5.9 65 94-158 8-79 (377)
310 4gqa_A NAD binding oxidoreduct 96.7 0.0014 4.7E-08 63.5 5.1 66 99-164 27-108 (412)
311 1zh8_A Oxidoreductase; TM0312, 96.7 0.0021 7.3E-08 60.7 6.3 66 99-164 19-94 (340)
312 3dty_A Oxidoreductase, GFO/IDH 96.7 0.0013 4.5E-08 63.5 4.9 67 98-164 12-97 (398)
313 1ys4_A Aspartate-semialdehyde 96.7 0.0032 1.1E-07 60.2 7.5 86 99-189 9-115 (354)
314 3grf_A Ornithine carbamoyltran 96.7 0.012 4.1E-07 55.8 11.4 136 39-188 116-283 (328)
315 1piw_A Hypothetical zinc-type 96.7 0.0033 1.1E-07 59.7 7.5 90 97-189 179-277 (360)
316 3ojo_A CAP5O; rossmann fold, c 96.6 0.0051 1.7E-07 60.5 8.9 86 96-191 313-409 (431)
317 3fhl_A Putative oxidoreductase 96.6 0.0016 5.3E-08 62.1 5.0 65 99-164 6-77 (362)
318 2czc_A Glyceraldehyde-3-phosph 96.6 0.0028 9.7E-08 60.1 6.8 65 100-164 4-91 (334)
319 2o3j_A UDP-glucose 6-dehydroge 96.6 0.0071 2.4E-07 60.2 10.0 101 95-198 332-455 (481)
320 4gmf_A Yersiniabactin biosynth 96.6 0.0018 6.1E-08 62.5 5.4 65 98-163 7-77 (372)
321 3v5n_A Oxidoreductase; structu 96.6 0.0023 7.8E-08 62.3 6.3 66 99-164 38-122 (417)
322 2xxj_A L-LDH, L-lactate dehydr 96.6 0.0027 9.4E-08 59.6 6.6 112 99-210 1-140 (310)
323 3o9z_A Lipopolysaccaride biosy 96.6 0.0036 1.2E-07 58.5 7.1 65 99-163 4-83 (312)
324 1mld_A Malate dehydrogenase; o 96.6 0.0082 2.8E-07 56.4 9.5 96 99-196 1-123 (314)
325 3oa2_A WBPB; oxidoreductase, s 96.6 0.0036 1.2E-07 58.7 6.9 66 99-164 4-85 (318)
326 1hdo_A Biliverdin IX beta redu 96.6 0.0057 2E-07 52.0 7.6 65 98-162 3-77 (206)
327 3gd5_A Otcase, ornithine carba 96.6 0.017 5.7E-07 54.7 11.4 128 40-188 120-273 (323)
328 1rjw_A ADH-HT, alcohol dehydro 96.6 0.0033 1.1E-07 59.1 6.6 88 97-189 164-262 (339)
329 1uuf_A YAHK, zinc-type alcohol 96.5 0.0038 1.3E-07 59.7 7.0 88 97-189 194-289 (369)
330 4h31_A Otcase, ornithine carba 96.5 0.029 9.8E-07 53.9 13.1 131 39-188 141-300 (358)
331 1xyg_A Putative N-acetyl-gamma 96.5 0.0059 2E-07 58.6 8.4 86 97-189 15-113 (359)
332 1v9l_A Glutamate dehydrogenase 96.5 0.007 2.4E-07 59.3 9.0 112 93-213 205-343 (421)
333 3h2s_A Putative NADH-flavin re 96.5 0.011 3.9E-07 51.1 9.5 92 99-190 1-106 (224)
334 2d8a_A PH0655, probable L-thre 96.5 0.0025 8.6E-08 60.1 5.7 87 97-188 167-267 (348)
335 3ip1_A Alcohol dehydrogenase, 96.5 0.007 2.4E-07 58.4 8.9 89 97-189 213-319 (404)
336 2ozp_A N-acetyl-gamma-glutamyl 96.5 0.0062 2.1E-07 58.1 8.4 85 99-189 5-100 (345)
337 2d4a_B Malate dehydrogenase; a 96.5 0.0034 1.2E-07 58.9 6.5 89 100-189 1-117 (308)
338 2ixa_A Alpha-N-acetylgalactosa 96.5 0.0043 1.5E-07 60.8 7.4 66 99-164 21-103 (444)
339 3csu_A Protein (aspartate carb 96.5 0.0084 2.9E-07 56.5 8.9 127 41-188 116-267 (310)
340 3ff4_A Uncharacterized protein 96.5 0.0069 2.4E-07 49.2 7.3 98 99-208 5-107 (122)
341 2we8_A Xanthine dehydrogenase; 96.5 0.011 3.6E-07 57.4 9.8 92 98-207 204-298 (386)
342 1cdo_A Alcohol dehydrogenase; 96.5 0.012 4.2E-07 55.9 10.2 88 97-189 192-295 (374)
343 1o6z_A MDH, malate dehydrogena 96.5 0.0068 2.3E-07 56.6 8.2 113 99-211 1-144 (303)
344 1kyq_A Met8P, siroheme biosynt 96.5 0.0014 4.8E-08 60.8 3.4 40 93-132 8-47 (274)
345 4h3v_A Oxidoreductase domain p 96.5 0.0019 6.5E-08 61.2 4.4 66 99-164 7-87 (390)
346 4ekn_B Aspartate carbamoyltran 96.5 0.034 1.2E-06 52.2 12.9 126 40-188 113-263 (306)
347 3ius_A Uncharacterized conserv 96.5 0.0054 1.8E-07 55.4 7.3 93 98-192 5-106 (286)
348 3fi9_A Malate dehydrogenase; s 96.5 0.0027 9.1E-08 60.7 5.4 66 96-161 6-85 (343)
349 1lnq_A MTHK channels, potassiu 96.5 0.0036 1.2E-07 58.8 6.2 87 98-187 115-210 (336)
350 3u3x_A Oxidoreductase; structu 96.5 0.0047 1.6E-07 58.9 7.0 66 98-163 26-99 (361)
351 2yfq_A Padgh, NAD-GDH, NAD-spe 96.4 0.0028 9.7E-08 62.2 5.5 108 93-208 207-340 (421)
352 1zud_1 Adenylyltransferase THI 96.4 0.0041 1.4E-07 56.5 6.3 91 94-188 24-150 (251)
353 1cf2_P Protein (glyceraldehyde 96.4 0.0027 9.2E-08 60.4 5.3 65 99-163 2-89 (337)
354 3aoe_E Glutamate dehydrogenase 96.4 0.016 5.6E-07 56.7 10.8 113 93-214 213-342 (419)
355 3k92_A NAD-GDH, NAD-specific g 96.4 0.01 3.4E-07 58.2 9.3 113 93-214 216-348 (424)
356 1p0f_A NADP-dependent alcohol 96.4 0.011 3.8E-07 56.1 9.5 87 97-188 191-293 (373)
357 2dt5_A AT-rich DNA-binding pro 96.4 0.0014 4.7E-08 58.5 2.8 63 99-162 81-150 (211)
358 3qvo_A NMRA family protein; st 96.4 0.0043 1.5E-07 54.9 6.1 94 96-191 21-127 (236)
359 1pl8_A Human sorbitol dehydrog 96.4 0.012 4.3E-07 55.5 9.7 88 97-189 171-274 (356)
360 3keo_A Redox-sensing transcrip 96.4 0.0033 1.1E-07 56.1 5.2 66 98-163 84-159 (212)
361 2jhf_A Alcohol dehydrogenase E 96.4 0.015 5.3E-07 55.2 10.3 87 97-188 191-293 (374)
362 3s2e_A Zinc-containing alcohol 96.4 0.0035 1.2E-07 58.8 5.6 87 97-188 166-263 (340)
363 1bgv_A Glutamate dehydrogenase 96.4 0.0093 3.2E-07 58.9 8.6 115 93-214 225-370 (449)
364 3dhn_A NAD-dependent epimerase 96.3 0.0061 2.1E-07 53.1 6.6 64 99-162 5-77 (227)
365 3tqh_A Quinone oxidoreductase; 96.3 0.0036 1.2E-07 58.4 5.3 87 97-189 152-246 (321)
366 1obb_A Maltase, alpha-glucosid 96.3 0.0089 3E-07 59.6 8.3 113 98-211 3-174 (480)
367 3sds_A Ornithine carbamoyltran 96.3 0.039 1.3E-06 52.8 12.4 139 39-188 137-308 (353)
368 2fzw_A Alcohol dehydrogenase c 96.3 0.014 4.8E-07 55.4 9.4 87 97-188 190-292 (373)
369 4aj2_A L-lactate dehydrogenase 96.3 0.011 3.7E-07 56.2 8.5 95 95-190 16-138 (331)
370 1e3j_A NADP(H)-dependent ketos 96.3 0.018 6.1E-07 54.2 10.0 88 97-189 168-272 (352)
371 1e3i_A Alcohol dehydrogenase, 96.3 0.017 5.7E-07 55.0 9.9 87 97-188 195-297 (376)
372 3r6d_A NAD-dependent epimerase 96.3 0.0066 2.3E-07 52.9 6.5 64 99-162 6-83 (221)
373 3do5_A HOM, homoserine dehydro 96.3 0.016 5.4E-07 54.9 9.5 109 99-208 3-136 (327)
374 4ej6_A Putative zinc-binding d 96.3 0.0049 1.7E-07 58.8 6.0 87 97-188 182-284 (370)
375 1u8x_X Maltose-6'-phosphate gl 96.3 0.01 3.5E-07 59.0 8.4 113 98-210 28-193 (472)
376 4e4t_A Phosphoribosylaminoimid 96.3 0.0055 1.9E-07 59.8 6.4 64 95-158 32-102 (419)
377 2cf5_A Atccad5, CAD, cinnamyl 96.2 0.0051 1.7E-07 58.3 5.8 87 97-188 180-275 (357)
378 1pqw_A Polyketide synthase; ro 96.2 0.0029 1E-07 54.4 3.8 35 97-131 38-73 (198)
379 1nvm_B Acetaldehyde dehydrogen 96.2 0.0068 2.3E-07 57.0 6.6 85 99-186 5-102 (312)
380 1iz0_A Quinone oxidoreductase; 96.2 0.0055 1.9E-07 56.5 5.8 85 97-188 125-218 (302)
381 2nqt_A N-acetyl-gamma-glutamyl 96.2 0.0088 3E-07 57.3 7.4 93 99-197 10-119 (352)
382 4hv4_A UDP-N-acetylmuramate--L 96.2 0.009 3.1E-07 59.5 7.8 109 98-206 22-148 (494)
383 1smk_A Malate dehydrogenase, g 96.2 0.0091 3.1E-07 56.3 7.4 64 99-162 9-86 (326)
384 1zq6_A Otcase, ornithine carba 96.2 0.076 2.6E-06 50.9 13.8 128 39-188 151-315 (359)
385 3cps_A Glyceraldehyde 3-phosph 96.2 0.013 4.5E-07 56.1 8.5 86 99-189 18-139 (354)
386 2yfk_A Aspartate/ornithine car 96.2 0.016 5.5E-07 56.7 9.2 98 45-160 153-271 (418)
387 2yv1_A Succinyl-COA ligase [AD 96.1 0.004 1.4E-07 58.1 4.6 103 99-208 14-123 (294)
388 4eye_A Probable oxidoreductase 96.1 0.0063 2.2E-07 57.3 5.8 86 97-188 159-257 (342)
389 3nv9_A Malic enzyme; rossmann 96.1 0.037 1.3E-06 54.6 11.3 181 44-261 186-396 (487)
390 1u8f_O GAPDH, glyceraldehyde-3 96.1 0.013 4.3E-07 55.8 7.8 87 99-190 4-124 (335)
391 3uog_A Alcohol dehydrogenase; 96.1 0.0063 2.1E-07 57.8 5.6 86 97-188 189-287 (363)
392 3e5r_O PP38, glyceraldehyde-3- 96.1 0.011 3.7E-07 56.4 7.1 29 100-128 5-34 (337)
393 2hcy_A Alcohol dehydrogenase 1 96.0 0.012 4E-07 55.4 7.3 88 97-189 169-270 (347)
394 4ew6_A D-galactose-1-dehydroge 96.0 0.0059 2E-07 57.5 5.1 60 98-162 25-91 (330)
395 3rui_A Ubiquitin-like modifier 96.0 0.022 7.7E-07 54.2 9.1 91 94-188 30-171 (340)
396 3goh_A Alcohol dehydrogenase, 96.0 0.0087 3E-07 55.5 6.2 85 97-187 142-228 (315)
397 3q98_A Transcarbamylase; rossm 96.0 0.074 2.5E-06 51.7 12.9 97 46-160 157-274 (399)
398 3kzn_A Aotcase, N-acetylornith 96.0 0.093 3.2E-06 50.2 13.5 102 39-160 151-273 (359)
399 4ina_A Saccharopine dehydrogen 96.0 0.0046 1.6E-07 60.1 4.4 86 99-189 2-108 (405)
400 3r3j_A Glutamate dehydrogenase 96.0 0.014 4.8E-07 57.6 7.8 114 93-214 234-378 (456)
401 2bka_A CC3, TAT-interacting pr 96.0 0.024 8.2E-07 49.7 8.7 68 96-163 16-95 (242)
402 3i6i_A Putative leucoanthocyan 96.0 0.026 9E-07 52.6 9.3 65 97-161 9-92 (346)
403 2h6e_A ADH-4, D-arabinose 1-de 96.0 0.0081 2.8E-07 56.5 5.8 87 97-188 170-269 (344)
404 3uko_A Alcohol dehydrogenase c 96.0 0.013 4.3E-07 56.0 7.1 87 97-188 193-295 (378)
405 3on5_A BH1974 protein; structu 95.9 0.018 6.2E-07 55.3 8.2 138 98-266 199-344 (362)
406 1js1_X Transcarbamylase; alpha 95.9 0.038 1.3E-06 52.3 10.2 125 40-187 130-274 (324)
407 3h9e_O Glyceraldehyde-3-phosph 95.9 0.0099 3.4E-07 56.7 6.2 37 99-135 8-45 (346)
408 1qyc_A Phenylcoumaran benzylic 95.9 0.019 6.3E-07 52.3 8.0 65 98-162 4-87 (308)
409 1lu9_A Methylene tetrahydromet 95.9 0.0079 2.7E-07 55.3 5.4 39 93-131 114-153 (287)
410 4f3y_A DHPR, dihydrodipicolina 95.9 0.008 2.7E-07 55.5 5.4 87 99-190 8-106 (272)
411 3hn7_A UDP-N-acetylmuramate-L- 95.9 0.017 6E-07 57.9 8.3 110 96-205 17-147 (524)
412 3mw9_A GDH 1, glutamate dehydr 95.9 0.036 1.2E-06 55.3 10.3 109 95-213 241-370 (501)
413 3oqb_A Oxidoreductase; structu 95.9 0.0096 3.3E-07 56.8 6.0 66 99-164 7-95 (383)
414 3gms_A Putative NADPH:quinone 95.9 0.0082 2.8E-07 56.3 5.3 86 97-188 144-243 (340)
415 2gas_A Isoflavone reductase; N 95.9 0.019 6.6E-07 52.1 7.7 65 98-162 2-86 (307)
416 1f8f_A Benzyl alcohol dehydrog 95.8 0.0065 2.2E-07 57.7 4.5 87 97-188 190-289 (371)
417 1xgk_A Nitrogen metabolite rep 95.8 0.014 4.8E-07 55.2 6.7 95 97-191 4-115 (352)
418 2ejw_A HDH, homoserine dehydro 95.8 0.0071 2.4E-07 57.5 4.6 99 100-205 5-116 (332)
419 2dph_A Formaldehyde dismutase; 95.8 0.0096 3.3E-07 57.2 5.6 92 97-189 185-300 (398)
420 3fbg_A Putative arginate lyase 95.8 0.0099 3.4E-07 56.0 5.5 46 97-142 150-197 (346)
421 2yyy_A Glyceraldehyde-3-phosph 95.8 0.032 1.1E-06 53.2 9.1 85 99-187 3-112 (343)
422 2r6j_A Eugenol synthase 1; phe 95.8 0.028 9.7E-07 51.5 8.5 64 99-162 12-89 (318)
423 4g65_A TRK system potassium up 95.7 0.011 3.6E-07 58.6 5.8 65 98-162 3-78 (461)
424 3fpc_A NADP-dependent alcohol 95.7 0.0089 3.1E-07 56.4 5.0 87 97-188 166-266 (352)
425 2vn8_A Reticulon-4-interacting 95.7 0.029 9.8E-07 53.4 8.5 90 97-190 183-282 (375)
426 1b8p_A Protein (malate dehydro 95.7 0.023 7.8E-07 53.5 7.7 91 99-189 6-134 (329)
427 4dup_A Quinone oxidoreductase; 95.7 0.0074 2.5E-07 57.1 4.3 86 97-188 167-265 (353)
428 1s6y_A 6-phospho-beta-glucosid 95.7 0.03 1E-06 55.3 8.8 112 99-210 8-174 (450)
429 2yv2_A Succinyl-COA synthetase 95.7 0.0098 3.3E-07 55.5 4.9 103 99-208 14-124 (297)
430 3ijp_A DHPR, dihydrodipicolina 95.6 0.023 7.9E-07 52.9 7.3 87 99-190 22-121 (288)
431 3gpi_A NAD-dependent epimerase 95.6 0.012 4E-07 53.3 5.3 62 97-161 2-72 (286)
432 4b7c_A Probable oxidoreductase 95.6 0.0062 2.1E-07 56.9 3.5 87 97-189 149-249 (336)
433 2c0c_A Zinc binding alcohol de 95.6 0.0095 3.3E-07 56.6 4.6 87 97-189 163-262 (362)
434 3dr3_A N-acetyl-gamma-glutamyl 95.6 0.018 6E-07 54.9 6.4 87 99-190 5-108 (337)
435 1v3u_A Leukotriene B4 12- hydr 95.6 0.016 5.5E-07 54.0 6.0 45 97-141 145-191 (333)
436 3ruf_A WBGU; rossmann fold, UD 95.5 0.063 2.2E-06 49.7 10.1 68 95-162 22-110 (351)
437 2b5w_A Glucose dehydrogenase; 95.5 0.021 7.3E-07 53.9 6.9 86 97-187 172-272 (357)
438 3vtf_A UDP-glucose 6-dehydroge 95.5 0.018 6.2E-07 56.8 6.5 84 95-187 330-426 (444)
439 2x5o_A UDP-N-acetylmuramoylala 95.5 0.0079 2.7E-07 58.9 3.9 109 95-204 2-128 (439)
440 3ip3_A Oxidoreductase, putativ 95.5 0.0089 3E-07 56.1 4.1 63 99-162 3-77 (337)
441 2dq4_A L-threonine 3-dehydroge 95.5 0.009 3.1E-07 56.1 4.1 35 97-131 164-199 (343)
442 1hdg_O Holo-D-glyceraldehyde-3 95.5 0.019 6.5E-07 54.5 6.3 31 99-129 1-34 (332)
443 1vj0_A Alcohol dehydrogenase, 95.5 0.019 6.6E-07 54.8 6.3 46 97-142 195-242 (380)
444 1p3d_A UDP-N-acetylmuramate--a 95.4 0.027 9.2E-07 55.6 7.5 108 98-205 18-143 (475)
445 3jyn_A Quinone oxidoreductase; 95.4 0.014 4.8E-07 54.4 5.1 86 97-188 140-239 (325)
446 1mv8_A GMD, GDP-mannose 6-dehy 95.4 0.019 6.5E-07 56.1 6.3 85 97-187 312-419 (436)
447 2rir_A Dipicolinate synthase, 95.4 0.026 8.9E-07 52.2 6.9 106 96-208 5-121 (300)
448 4gsl_A Ubiquitin-like modifier 95.4 0.038 1.3E-06 56.5 8.6 129 43-188 282-463 (615)
449 4dvj_A Putative zinc-dependent 95.4 0.04 1.4E-06 52.3 8.4 86 97-187 171-269 (363)
450 3oig_A Enoyl-[acyl-carrier-pro 95.4 0.073 2.5E-06 47.6 9.7 38 94-131 3-43 (266)
451 1kol_A Formaldehyde dehydrogen 95.4 0.017 5.8E-07 55.4 5.8 92 97-188 185-300 (398)
452 2ep5_A 350AA long hypothetical 95.4 0.042 1.4E-06 52.3 8.5 85 99-189 5-109 (350)
453 3qwb_A Probable quinone oxidor 95.4 0.013 4.3E-07 54.8 4.7 86 97-188 148-247 (334)
454 3c1o_A Eugenol synthase; pheny 95.4 0.037 1.3E-06 50.7 7.7 65 98-162 4-87 (321)
455 3upl_A Oxidoreductase; rossman 95.4 0.023 7.8E-07 56.1 6.6 106 99-208 24-160 (446)
456 3dqp_A Oxidoreductase YLBE; al 95.4 0.033 1.1E-06 48.3 7.0 64 99-163 1-74 (219)
457 2wm3_A NMRA-like family domain 95.3 0.028 9.7E-07 51.1 6.7 64 98-161 5-81 (299)
458 2jl1_A Triphenylmethane reduct 95.3 0.021 7.1E-07 51.4 5.7 94 99-192 1-110 (287)
459 2j3h_A NADP-dependent oxidored 95.3 0.013 4.3E-07 55.0 4.4 45 97-141 155-202 (345)
460 4a0s_A Octenoyl-COA reductase/ 95.3 0.041 1.4E-06 53.6 8.2 87 97-189 220-337 (447)
461 2f00_A UDP-N-acetylmuramate--L 95.3 0.033 1.1E-06 55.3 7.6 107 98-205 19-144 (491)
462 3e48_A Putative nucleoside-dip 95.3 0.025 8.6E-07 51.0 6.3 64 99-162 1-75 (289)
463 2z1m_A GDP-D-mannose dehydrata 95.3 0.038 1.3E-06 50.7 7.6 66 97-162 2-85 (345)
464 1y1p_A ARII, aldehyde reductas 95.3 0.087 3E-06 48.2 10.1 67 95-161 8-92 (342)
465 4id9_A Short-chain dehydrogena 95.3 0.02 6.9E-07 53.1 5.7 65 93-162 14-87 (347)
466 1xq6_A Unknown protein; struct 95.3 0.027 9.3E-07 49.2 6.3 64 96-161 2-78 (253)
467 3h8v_A Ubiquitin-like modifier 95.3 0.032 1.1E-06 52.0 6.9 38 94-131 32-70 (292)
468 3hhp_A Malate dehydrogenase; M 95.2 0.06 2.1E-06 50.5 8.8 99 99-199 1-127 (312)
469 3mtj_A Homoserine dehydrogenas 95.2 0.028 9.6E-07 55.4 6.7 106 99-208 11-131 (444)
470 3ing_A Homoserine dehydrogenas 95.2 0.04 1.4E-06 52.1 7.5 108 99-207 5-137 (325)
471 3oh8_A Nucleoside-diphosphate 95.2 0.037 1.3E-06 55.0 7.6 64 98-162 147-211 (516)
472 3nrc_A Enoyl-[acyl-carrier-pro 95.2 0.14 4.8E-06 46.3 11.0 38 94-131 22-62 (280)
473 1qor_A Quinone oxidoreductase; 95.2 0.017 5.7E-07 53.8 4.7 45 97-141 140-186 (327)
474 3vh1_A Ubiquitin-like modifier 95.2 0.023 7.8E-07 58.0 6.0 91 94-188 323-464 (598)
475 3h5n_A MCCB protein; ubiquitin 95.2 0.036 1.2E-06 52.9 7.2 89 94-187 114-240 (353)
476 3pi7_A NADH oxidoreductase; gr 95.2 0.05 1.7E-06 51.1 8.0 84 99-188 166-263 (349)
477 2eih_A Alcohol dehydrogenase; 95.1 0.022 7.4E-07 53.5 5.4 35 97-131 166-201 (343)
478 2x0j_A Malate dehydrogenase; o 95.1 0.022 7.4E-07 53.2 5.2 91 99-189 1-119 (294)
479 2zcu_A Uncharacterized oxidore 95.1 0.016 5.5E-07 52.0 4.3 62 100-161 1-74 (286)
480 1ebf_A Homoserine dehydrogenas 95.1 0.016 5.5E-07 55.5 4.4 85 100-190 6-117 (358)
481 3k5i_A Phosphoribosyl-aminoimi 95.1 0.024 8.1E-07 54.8 5.7 67 91-158 17-92 (403)
482 3gqv_A Enoyl reductase; medium 95.1 0.057 1.9E-06 51.3 8.3 88 96-188 163-263 (371)
483 3nkl_A UDP-D-quinovosamine 4-d 95.1 0.022 7.4E-07 46.2 4.6 66 98-163 4-76 (141)
484 1vkn_A N-acetyl-gamma-glutamyl 95.0 0.044 1.5E-06 52.4 7.3 86 98-190 13-109 (351)
485 3jv7_A ADH-A; dehydrogenase, n 95.0 0.023 7.9E-07 53.3 5.2 87 97-188 171-270 (345)
486 1dih_A Dihydrodipicolinate red 95.0 0.028 9.6E-07 51.8 5.6 63 99-161 6-81 (273)
487 2pzm_A Putative nucleotide sug 94.9 0.022 7.4E-07 52.8 4.7 71 92-162 14-98 (330)
488 3b1j_A Glyceraldehyde 3-phosph 94.9 0.038 1.3E-06 52.6 6.4 29 100-128 4-35 (339)
489 2r00_A Aspartate-semialdehyde 94.8 0.024 8.1E-07 53.8 4.8 86 99-189 4-97 (336)
490 1yb5_A Quinone oxidoreductase; 94.8 0.036 1.2E-06 52.3 6.0 45 97-141 170-216 (351)
491 3m6i_A L-arabinitol 4-dehydrog 94.8 0.059 2E-06 50.8 7.5 88 97-189 179-284 (363)
492 2zb4_A Prostaglandin reductase 94.8 0.029 9.9E-07 52.9 5.3 35 97-131 158-196 (357)
493 2j8z_A Quinone oxidoreductase; 94.8 0.031 1.1E-06 52.7 5.5 35 97-131 162-197 (354)
494 1jvb_A NAD(H)-dependent alcoho 94.8 0.031 1.1E-06 52.4 5.5 35 97-131 170-206 (347)
495 3cmc_O GAPDH, glyceraldehyde-3 94.8 0.048 1.6E-06 51.8 6.7 30 100-129 3-33 (334)
496 1qyd_A Pinoresinol-lariciresin 94.7 0.052 1.8E-06 49.3 6.8 66 98-163 4-87 (313)
497 1wly_A CAAR, 2-haloacrylate re 94.7 0.028 9.4E-07 52.5 4.9 35 97-131 145-180 (333)
498 1p9l_A Dihydrodipicolinate red 94.7 0.11 3.9E-06 47.0 8.8 73 100-190 2-78 (245)
499 1zsy_A Mitochondrial 2-enoyl t 94.6 0.14 4.9E-06 48.1 9.7 86 97-188 167-270 (357)
500 1gad_O D-glyceraldehyde-3-phos 94.6 0.05 1.7E-06 51.5 6.4 34 100-133 3-37 (330)
No 1
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=4.1e-70 Score=537.56 Aligned_cols=316 Identities=31% Similarity=0.451 Sum_probs=276.0
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
++|++++++.+++++++|+++| ||+|+++|+|+||||+++|+++||.|+|+|++|+.+||||+++++|+++|+++++++
T Consensus 58 ~~d~l~v~~~~~i~~~~l~~~p~Lk~I~~~~~G~d~IDl~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~ 137 (416)
T 3k5p_A 58 SAHIIGIRSRTQLTEEIFAAANRLIAVGCFSVGTNQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSV 137 (416)
T ss_dssp TCSEEEECSSCCBCHHHHHHCTTCCEEEECSSCCTTBCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred CCEEEEEcCCCCCCHHHHHhCCCcEEEEECccccCccCHHHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHH
Confidence 5899999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcc-ccChhhhccCCCEEEE
Q psy6348 80 SLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIA-SLGLEDIWPLADYITV 158 (333)
Q Consensus 80 ~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~-~~~l~ell~~aDvV~l 158 (333)
.+++|.|.+..+.+.+++|||+||||+|+||+.+|+++++|||+|++||++.... ..+.. ..++++++++||+|++
T Consensus 138 ~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~---~~~~~~~~sl~ell~~aDvV~l 214 (416)
T 3k5p_A 138 SAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQ---YGNVKPAASLDELLKTSDVVSL 214 (416)
T ss_dssp HHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCC---BTTBEECSSHHHHHHHCSEEEE
T ss_pred hhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhc---ccCcEecCCHHHHHhhCCEEEE
Confidence 9999999987777899999999999999999999999999999999999875321 11233 3489999999999999
Q ss_pred ecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCC--ccchhhcCCCcEEE
Q psy6348 159 HTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKS--EQTFELIKHPKVIV 236 (333)
Q Consensus 159 ~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~--~~~~~L~~~pnvi~ 236 (333)
|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|++||++|+++||+||||++||++. ++.+||+++|||++
T Consensus 215 hvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvil 294 (416)
T 3k5p_A 215 HVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVIL 294 (416)
T ss_dssp CCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEE
T ss_pred eCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999653 23479999999999
Q ss_pred ccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCcccccccCcc---------cCCCCCchHHHHHHHhHHHHHHh
Q psy6348 237 TPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNAPALAAS---------RNPENTSWISLARSLGKISSQLL 307 (333)
Q Consensus 237 TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~~~~~~~---------~~~~~~~~~~l~~~~g~~~~~~~ 307 (333)
|||+|++|.|++.+++..+++|+.+|..++ .+.+.||.|.++.. ..+++.|. .++++-.-+.
T Consensus 295 TPHig~~T~ea~~~~~~~~~~nl~~~l~~g----~~~~~Vn~p~~~~~~~~~~~r~~~~h~n~p~-----~~~~i~~~~~ 365 (416)
T 3k5p_A 295 TPHIGGSTEEAQERIGTEVTRKLVEYSDVG----STVGAVNFPQVQLPPRPTGTRFMHVHENRPG-----ILNSLMNVFS 365 (416)
T ss_dssp CCSCTTCCHHHHHHHHHHHHHHHHHHHHHC----CCTTBSSSCCCCCCCCSSSEEEEEEECCCTT-----HHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhC----CCCceeeCCCcCCCCCCCceEEEEEecCCcc-----HHHHHHHHHH
Confidence 999999999999999999999999977555 68999999987643 24578898 4555555443
Q ss_pred cCC-------CcCCcceeEeeeccCCcc
Q psy6348 308 QTS-------TFSSTAFSLVTQDITNVT 328 (333)
Q Consensus 308 ~~~-------~~~~~~~~~~~~~~~~~~ 328 (333)
+.. ..+.+.+.|+.-|+.+|+
T Consensus 366 ~~~~ni~~~~~~~~~~~~y~~~d~~~~~ 393 (416)
T 3k5p_A 366 HHHINIASQFLQTDGEVGYLVMEADGVG 393 (416)
T ss_dssp HTTCCEEEEEEEECSSCEEEEEEECCCH
T ss_pred HcCCCHHHHhccCCCceEEEEEEecCCC
Confidence 332 224578899999998553
No 2
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=3.6e-70 Score=526.14 Aligned_cols=265 Identities=31% Similarity=0.425 Sum_probs=248.0
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
++|++++++.+++++++|+++| ||+|++.|+|+||||+++|+++||.|+|+||+|+.+||||+++++|++.|+++.+++
T Consensus 42 ~ad~i~v~~~~~i~~~~l~~~p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~ 121 (334)
T 3kb6_A 42 KAELISVFVYDKLTEELLSKMPRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIED 121 (334)
T ss_dssp HCSEEEECTTSCBCHHHHHTCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred CCCEEEEeCCCCCCHHHHhcCCCCcEEEECCcccchhcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhccccccc
Confidence 4799999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCcccc-cCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEE
Q psy6348 80 SLKEGKWDR-KLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITV 158 (333)
Q Consensus 80 ~~~~g~w~~-~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l 158 (333)
.+++|.|.+ ..+.+.+++|||+||||+|+||+.+|+++++|||+|++|||+... ...+.++.+.+++|++++||+|++
T Consensus 122 ~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~-~~~~~~~~~~~l~ell~~sDivsl 200 (334)
T 3kb6_A 122 RVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRE-DLKEKGCVYTSLDELLKESDVISL 200 (334)
T ss_dssp HHHTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHTTCEECCHHHHHHHCSEEEE
T ss_pred cccccccccccccccceecCcEEEEECcchHHHHHHHhhcccCceeeecCCccch-hhhhcCceecCHHHHHhhCCEEEE
Confidence 999999864 345689999999999999999999999999999999999998654 345667888899999999999999
Q ss_pred ecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCC--cc-----------c
Q psy6348 159 HTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKS--EQ-----------T 225 (333)
Q Consensus 159 ~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~--~~-----------~ 225 (333)
|+|+|++|+++|+++.|++||+|++|||+|||++||++||++||++|+|+||+||||++||.+. +. .
T Consensus 201 h~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~~ 280 (334)
T 3kb6_A 201 HVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKI 280 (334)
T ss_dssp CCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHH
T ss_pred cCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999531 11 1
Q ss_pred hhhcCCCcEEEccCCCCCcHHHHHHHHHHHHHHHHHhHcCC
Q psy6348 226 FELIKHPKVIVTPHLGASTKEAQIRVAVEIAEQFIALANTN 266 (333)
Q Consensus 226 ~~L~~~pnvi~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~ 266 (333)
.||+.+|||++|||+|++|.|++.++++.+++||.+|..|+
T Consensus 281 ~~L~~~~nvilTPHia~~T~ea~~~~~~~~~~ni~~~l~Ge 321 (334)
T 3kb6_A 281 LELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVKGD 321 (334)
T ss_dssp HHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hhhccCCCEEECCchhhChHHHHHHHHHHHHHHHHHHHcCC
Confidence 27999999999999999999999999999999999999997
No 3
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=4e-69 Score=530.65 Aligned_cols=286 Identities=31% Similarity=0.474 Sum_probs=252.8
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
++|++++|+.+++++++|+++| ||+|+++|+|+||||+++|+++||.|+|+|++|+.+||||++++||+++|+++++++
T Consensus 47 ~~d~l~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~iD~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~ 126 (404)
T 1sc6_A 47 DAHFIGLRSRTHLTEDVINAAEKLVAIGAFAIGTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANA 126 (404)
T ss_dssp SCSEEEECSSCCBCHHHHHHCSSCCEEEECSSCCTTBCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred CCeEEEEcCCCCCCHHHHhhCCCCcEEEECCcccCccCHHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHH
Confidence 5899999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcccc-ChhhhccCCCEEEE
Q psy6348 80 SLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASL-GLEDIWPLADYITV 158 (333)
Q Consensus 80 ~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~-~l~ell~~aDvV~l 158 (333)
.+++|.|.+..+.+.+++|||+||||+|+||+.+|+++++|||+|++|||+.... ..++... ++++++++||+|++
T Consensus 127 ~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---~~~~~~~~~l~ell~~aDvV~l 203 (404)
T 1sc6_A 127 KAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP---LGNATQVQHLSDLLNMSDVVSL 203 (404)
T ss_dssp HHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC---CTTCEECSCHHHHHHHCSEEEE
T ss_pred HHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc---cCCceecCCHHHHHhcCCEEEE
Confidence 9999999877777899999999999999999999999999999999999976322 1134444 89999999999999
Q ss_pred ecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCC--ccchhhcCCCcEEE
Q psy6348 159 HTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKS--EQTFELIKHPKVIV 236 (333)
Q Consensus 159 ~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~--~~~~~L~~~pnvi~ 236 (333)
|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+++||+||||++||++. +..+|||++|||++
T Consensus 204 ~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvil 283 (404)
T 1sc6_A 204 HVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLL 283 (404)
T ss_dssp CCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEE
T ss_pred ccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999652 23479999999999
Q ss_pred ccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCcccccccCcc--------cCCCCCchH
Q psy6348 237 TPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNAPALAAS--------RNPENTSWI 293 (333)
Q Consensus 237 TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~~~~~~~--------~~~~~~~~~ 293 (333)
|||+|++|.|++.+++..+++|+.+|..|+ .+.|+||.|.++.. ..++++|.+
T Consensus 284 TPHi~~~T~ea~~~~~~~~~~nl~~~l~g~----~~~~~vn~p~~~~~~~~~~rl~~~h~d~PGv 344 (404)
T 1sc6_A 284 TPHIGGSTQEAQENIGLEVAGKLIKYSDNG----STLSAVNFPEVSLPLHGGRRLMHIHENRPGV 344 (404)
T ss_dssp ECCCSCCSHHHHHHHHHHHHHHHHHHHHHC----CCTTBSSSCCCCCCCCSSEEEEEEEESCTTH
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHHcCC----CCcceecccccccCcCCcceEEEEeCCCCCH
Confidence 999999999999999999999999987766 78999999877643 234678883
No 4
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=1.8e-68 Score=515.91 Aligned_cols=269 Identities=25% Similarity=0.423 Sum_probs=251.2
Q ss_pred CceEEEEeCCCCCCHHHhccc-C-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccc
Q psy6348 1 KYDGLVVRSDTKVTAEVLQAS-N-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGC 78 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~-~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~ 78 (333)
++|++++++.+++++++|+++ | ||+|++.|+|+||||+++|+++||.|+|+||+|+.+||||++++||+++|++++++
T Consensus 71 ~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~~~G~D~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~ 150 (345)
T 4g2n_A 71 GAEVLFVTATEAITAEVIRKLQPGLKTIATLSVGYDHIDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEAD 150 (345)
T ss_dssp TCSEEEECTTSCBCHHHHHHTTTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CCeEEEEeCCCCCCHHHHHhhcCCceEEEEcCCcccccCHHHHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHH
Confidence 589999998889999999986 6 99999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCccccc---CCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcccc-ChhhhccCCC
Q psy6348 79 QSLKEGKWDRK---LYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASL-GLEDIWPLAD 154 (333)
Q Consensus 79 ~~~~~g~w~~~---~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~-~l~ell~~aD 154 (333)
+.+|+|+|.+. .+.|.+|+|||+||||+|+||+.+|+++++|||+|++|||+........ |++++ ++++++++||
T Consensus 151 ~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-g~~~~~~l~ell~~sD 229 (345)
T 4g2n_A 151 RMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEE-GAIYHDTLDSLLGASD 229 (345)
T ss_dssp HHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT-TCEECSSHHHHHHTCS
T ss_pred HHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhc-CCeEeCCHHHHHhhCC
Confidence 99999999753 3468999999999999999999999999999999999999863322222 77776 8999999999
Q ss_pred EEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcE
Q psy6348 155 YITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKV 234 (333)
Q Consensus 155 vV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnv 234 (333)
+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||++||+.+ +|||++|||
T Consensus 230 vV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP~~~---~pL~~~~nv 306 (345)
T 4g2n_A 230 IFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEPAID---PRYRSLDNI 306 (345)
T ss_dssp EEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCC---TTGGGCTTE
T ss_pred EEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCCCCC---chHHhCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999443 799999999
Q ss_pred EEccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCccc
Q psy6348 235 IVTPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLN 277 (333)
Q Consensus 235 i~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn 277 (333)
++|||+|++|.|++.+++..+++|+.+|..|+ ++.|.|+
T Consensus 307 ilTPHia~~t~e~~~~~~~~~~~ni~~~l~g~----~~~~~V~ 345 (345)
T 4g2n_A 307 FLTPHIGSATHETRDAMGWLLIQGIEALNQSD----VPDNLIS 345 (345)
T ss_dssp EECCSCTTCBHHHHHHHHHHHHHHHHHHHTTC----CCTTBCC
T ss_pred EEcCccCcCCHHHHHHHHHHHHHHHHHHHcCC----CCCCCcC
Confidence 99999999999999999999999999998887 7777764
No 5
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=7.3e-68 Score=509.36 Aligned_cols=273 Identities=29% Similarity=0.460 Sum_probs=258.7
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
++|++++++.+++++++|+++| ||+|++.|+|+||||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++
T Consensus 45 ~~d~~i~~~~~~i~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~ 124 (330)
T 4e5n_A 45 DAQAMMAFMPDRVDADFLQACPELRVIGCALKGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADA 124 (330)
T ss_dssp TCSEEEECTTCCBCHHHHHHCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred CCeEEEEeCCCCCCHHHHhhCCCCcEEEECCCcccccCHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHH
Confidence 5899999888999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCccccc--CCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCccccChhhhccCCCEE
Q psy6348 80 SLKEGKWDRK--LYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASLGLEDIWPLADYI 156 (333)
Q Consensus 80 ~~~~g~w~~~--~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~~l~ell~~aDvV 156 (333)
.+|+|+|... .+.|.+|+|||+||||+|+||+.+|+++++|||+|++|||+. ..+.+...|+...++++++++||+|
T Consensus 125 ~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV 204 (330)
T 4e5n_A 125 FVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFI 204 (330)
T ss_dssp HHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEE
T ss_pred HHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEE
Confidence 9999999732 346889999999999999999999999999999999999987 6666677788888999999999999
Q ss_pred EEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCC-------CCCCccchhhc
Q psy6348 157 TVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEE-------PPKSEQTFELI 229 (333)
Q Consensus 157 ~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~E-------P~~~~~~~~L~ 229 (333)
++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+++||+||||++| |++. .+|||
T Consensus 205 ~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~--~~~L~ 282 (330)
T 4e5n_A 205 LLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQI--DPALL 282 (330)
T ss_dssp EECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSC--CHHHH
T ss_pred EEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEecccccccccccCCCCCC--CchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 8543 37999
Q ss_pred CCCcEEEccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCccccc
Q psy6348 230 KHPKVIVTPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNAP 279 (333)
Q Consensus 230 ~~pnvi~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~~ 279 (333)
++|||++|||+|++|.|++.+++..+++|+.+|..|+ ++.|.||.|
T Consensus 283 ~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~g~----~~~~~vn~~ 328 (330)
T 4e5n_A 283 AHPNTLFTPHIGSAVRAVRLEIERCAAQNILQALAGE----RPINAVNRL 328 (330)
T ss_dssp TCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHTTS----CCTTBSSCC
T ss_pred cCCCEEECCcCCCChHHHHHHHHHHHHHHHHHHHcCC----CCCCccCCC
Confidence 9999999999999999999999999999999998888 799999976
No 6
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=2.5e-68 Score=513.37 Aligned_cols=274 Identities=30% Similarity=0.392 Sum_probs=257.8
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
++|++++++.+++++++|+++| ||+|++.|+|+||||+++|+++||.|+|+|++|+.+||||++++||+++|+++.+++
T Consensus 42 ~~d~li~~~~~~i~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~ 121 (334)
T 2pi1_A 42 KAELISVFVYDKLTEELLSKMPRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIED 121 (334)
T ss_dssp HCSEEEECTTSCBCHHHHTTCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred CCeEEEEcCCCCCCHHHHhhCCCCeEEEECCccccccCHHHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHH
Confidence 4899999988999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCccccc-CCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEE
Q psy6348 80 SLKEGKWDRK-LYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITV 158 (333)
Q Consensus 80 ~~~~g~w~~~-~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l 158 (333)
.+++|.|.+. ...+.+|+|||+||||+|+||+++|+++++|||+|++||++...... +.|++++++++++++||+|++
T Consensus 122 ~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-~~g~~~~~l~ell~~aDvV~l 200 (334)
T 2pi1_A 122 RVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK-EKGCVYTSLDELLKESDVISL 200 (334)
T ss_dssp HHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-HTTCEECCHHHHHHHCSEEEE
T ss_pred HHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhH-hcCceecCHHHHHhhCCEEEE
Confidence 9999999876 55789999999999999999999999999999999999998765532 568888899999999999999
Q ss_pred ecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCC-----------C--ccc
Q psy6348 159 HTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPK-----------S--EQT 225 (333)
Q Consensus 159 ~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~-----------~--~~~ 225 (333)
|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+++||+||||++||+. + +..
T Consensus 201 ~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~ 280 (334)
T 2pi1_A 201 HVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKI 280 (334)
T ss_dssp CCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHH
T ss_pred eCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCCCCCCccccccccccccccCccC
Confidence 999999999999999999999999999999999999999999999999999999999999961 0 124
Q ss_pred hhhcCCCcEEEccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCccccc
Q psy6348 226 FELIKHPKVIVTPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNAP 279 (333)
Q Consensus 226 ~~L~~~pnvi~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~~ 279 (333)
+|||++|||++|||+|++|.|++.++.+.+++||.+|..|+ ++.|.||..
T Consensus 281 ~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~g~----~~~~~Vn~~ 330 (334)
T 2pi1_A 281 LELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVKGD----LEQIKGNFV 330 (334)
T ss_dssp HHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTC----GGGGGGGEE
T ss_pred ChhhcCCCEEECCccccChHHHHHHHHHHHHHHHHHHHcCC----CCCceECcc
Confidence 78999999999999999999999999999999999988888 889999975
No 7
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.5e-67 Score=508.52 Aligned_cols=266 Identities=29% Similarity=0.454 Sum_probs=223.6
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
++|++++++.+++++++|+++| ||+|++.|+|+||||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++
T Consensus 71 ~~d~li~~~~~~i~~~~l~~~p~Lk~I~~~g~G~d~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~ 150 (340)
T 4dgs_A 71 SIRAVATGGGAGLSNEWMEKLPSLGIIAINGVGTDKVDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDR 150 (340)
T ss_dssp GCCEEEEETTTCBCHHHHHHCSSCCEEEEESSCCTTBCHHHHHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred CcEEEEEcCCCCCCHHHHhhCCCCEEEEECCCCccccCHHHHHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHH
Confidence 5899999998999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCccccc-C-CCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccc-cChhhhccCCCEE
Q psy6348 80 SLKEGKWDRK-L-YTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIAS-LGLEDIWPLADYI 156 (333)
Q Consensus 80 ~~~~g~w~~~-~-~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~-~~l~ell~~aDvV 156 (333)
.+|+|.|.+. . ..|.+|+|||+||||+|+||+.+|+++++|||+|++||++... ..+... .++++++++||+|
T Consensus 151 ~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~----~~~~~~~~sl~ell~~aDvV 226 (340)
T 4dgs_A 151 LVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS----GVDWIAHQSPVDLARDSDVL 226 (340)
T ss_dssp HHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT----TSCCEECSSHHHHHHTCSEE
T ss_pred HHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc----ccCceecCCHHHHHhcCCEE
Confidence 9999999874 2 3578999999999999999999999999999999999997643 223433 4899999999999
Q ss_pred EEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcEEE
Q psy6348 157 TVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIV 236 (333)
Q Consensus 157 ~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnvi~ 236 (333)
++|+|++++|+++++++.|+.||+|++|||++||+++|+++|+++|++|+++||+||||++||++. +|||++|||++
T Consensus 227 il~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~---~~L~~~~nvil 303 (340)
T 4dgs_A 227 AVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIR---SEFHTTPNTVL 303 (340)
T ss_dssp EECC----------CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCSSSSSCC---SHHHHSSSEEE
T ss_pred EEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCCc---cchhhCCCEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999764 49999999999
Q ss_pred ccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCccc
Q psy6348 237 TPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLN 277 (333)
Q Consensus 237 TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn 277 (333)
|||+|++|.|++.+++..+++|+.++..|+ ++.|.||
T Consensus 304 TPHia~~t~e~~~~~~~~~~~nl~~~~~g~----~~~~~Vn 340 (340)
T 4dgs_A 304 MPHQGSATVETRMAMGKLVLANLAAHFAGE----KAPNTVN 340 (340)
T ss_dssp CSSCSSCCHHHHHHHHHHHHHHHHHHHTTS----CCTTBC-
T ss_pred cCcCCcCCHHHHHHHHHHHHHHHHHHHcCC----CCCCCcC
Confidence 999999999999999999999999998888 7888887
No 8
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=9e-67 Score=505.55 Aligned_cols=278 Identities=32% Similarity=0.466 Sum_probs=260.1
Q ss_pred CceEEEE-eCCCCCCHHHhcccC-cceEEEcccCc----CccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCC
Q psy6348 1 KYDGLVV-RSDTKVTAEVLQASN-LQVVGRAGTGV----DNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNV 74 (333)
Q Consensus 1 ~~daliv-~s~~~v~~~~l~~~~-Lk~I~~~g~G~----d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i 74 (333)
++|++++ ++.+++++++|+++| ||+|++.|+|+ ||||+++|+++||.|+|+||+ +.+||||++++||+++|++
T Consensus 48 ~ad~li~~~~~~~~~~~~l~~~~~Lk~I~~~g~G~~~~~d~id~~~a~~~gI~V~n~pg~-~~~vAE~al~l~L~~~R~~ 126 (352)
T 3gg9_A 48 DVEALVLIRERTRVTRQLLDRLPKLKIISQTGRVSRDAGGHIDLEACTDKGVVVLEGKGS-PVAPAELTWALVMAAQRRI 126 (352)
T ss_dssp TCSEEEECTTSSCBCHHHHTTCTTCCEEEESSCCCCSSSCSBCHHHHHHHTCEEECCCCC-SHHHHHHHHHHHHHHHTTH
T ss_pred CCeEEEEeCCCCCCCHHHHhhCCCCeEEEEeCcccCCccCcccHHHHHhCCeEEEECCCC-cHHHHHHHHHHHHHHHhhH
Confidence 5899998 788899999999999 99999999999 999999999999999999999 9999999999999999999
Q ss_pred CccchhhhcCcccccC----------CCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcccc
Q psy6348 75 PQGCQSLKEGKWDRKL----------YTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASL 144 (333)
Q Consensus 75 ~~~~~~~~~g~w~~~~----------~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~ 144 (333)
+.+++.+++|.|.+.. ..|.+|.|||+||||+|+||+.+|+++++|||+|++||++...+.+.+.|++.+
T Consensus 127 ~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~ 206 (352)
T 3gg9_A 127 PQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSKERARADGFAVA 206 (352)
T ss_dssp HHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEe
Confidence 9999999999998642 357899999999999999999999999999999999999865555667888877
Q ss_pred -ChhhhccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCc
Q psy6348 145 -GLEDIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSE 223 (333)
Q Consensus 145 -~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~ 223 (333)
++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+++||+||||++||++.
T Consensus 207 ~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~- 285 (352)
T 3gg9_A 207 ESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQ- 285 (352)
T ss_dssp SSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCS-
T ss_pred CCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCC-
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999999653
Q ss_pred cchhhcCCCcEEEccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCcccccccCcccC
Q psy6348 224 QTFELIKHPKVIVTPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNAPALAASRN 286 (333)
Q Consensus 224 ~~~~L~~~pnvi~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~~~~~~~~~ 286 (333)
.+|||++|||++|||+|++|.|++.++...+++||.+|..|+ +.|.||++.+.....
T Consensus 286 -~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~G~-----p~~~Vn~~~~~~~~~ 342 (352)
T 3gg9_A 286 -GHTLLRMENCICTPHIGYVERESYEMYFGIAFQNILDILQGN-----VDSVANPTALAPALI 342 (352)
T ss_dssp -CCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTC-----CTTBSCGGGSSCTTT
T ss_pred -CChhhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-----CCcccCHHHHHHHHH
Confidence 379999999999999999999999999999999999999886 569999988776543
No 9
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=5.4e-67 Score=505.22 Aligned_cols=273 Identities=26% Similarity=0.375 Sum_probs=248.4
Q ss_pred CceEEEEeCCCCCCHH-HhcccC---cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCc
Q psy6348 1 KYDGLVVRSDTKVTAE-VLQASN---LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQ 76 (333)
Q Consensus 1 ~~daliv~s~~~v~~~-~l~~~~---Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~ 76 (333)
++|++++++.++++++ +|+++| ||+|++.|+|+||||+++|+++||.|+|+|++|+.+||||+++++|+++|+++.
T Consensus 45 ~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~ 124 (343)
T 2yq5_A 45 GCSSVSLKPLGPVDEEVVYQKLSEYGVKCIGLRIVGFNTINFDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGE 124 (343)
T ss_dssp TCSEEEECCSSCBCCHHHHHHHHHTTCCEEEESSSCCTTBCSSTTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCcEEEEcCCCCcCHHHHHHhccccCceEEEECceeecccchhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHH
Confidence 6899999988999999 999874 999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhh-cCcccc-cCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCC
Q psy6348 77 GCQSLK-EGKWDR-KLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLAD 154 (333)
Q Consensus 77 ~~~~~~-~g~w~~-~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aD 154 (333)
+++.+| +|.|.. ..+.+.+|+||||||||+|+||+.+|+++++|||+|++|||+.... .+.++.+.++++++++||
T Consensus 125 ~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~~~~~l~ell~~aD 202 (343)
T 2yq5_A 125 FRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE--FEPFLTYTDFDTVLKEAD 202 (343)
T ss_dssp HHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG--GTTTCEECCHHHHHHHCS
T ss_pred HHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh--hhccccccCHHHHHhcCC
Confidence 999999 898754 3467899999999999999999999999999999999999987542 233466679999999999
Q ss_pred EEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCcc----------
Q psy6348 155 YITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQ---------- 224 (333)
Q Consensus 155 vV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~---------- 224 (333)
+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+++||+||||++||+..+.
T Consensus 203 vV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~ 282 (343)
T 2yq5_A 203 IVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPE 282 (343)
T ss_dssp EEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCH
T ss_pred EEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccccCCCcccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999942111
Q ss_pred -chhhcCCCcEEEccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCccccc
Q psy6348 225 -TFELIKHPKVIVTPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNAP 279 (333)
Q Consensus 225 -~~~L~~~pnvi~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~~ 279 (333)
.+|||++|||++|||+|++|.|++.++++.+++|+.+|..|+ ++.|.||..
T Consensus 283 ~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~ni~~~l~g~----~~~~~v~~~ 334 (343)
T 2yq5_A 283 DYKTLAKMPNVVITPHSAFYTETSIRNMVQICLTDQLTIAKGG----RPRSIVNLT 334 (343)
T ss_dssp HHHHHTTCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTTC----CCTTBC---
T ss_pred chhHHhcCCCEEECCccccchHHHHHHHHHHHHHHHHHHHcCC----CCCceECCc
Confidence 158999999999999999999999999999999999998888 789999964
No 10
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=3.6e-66 Score=501.06 Aligned_cols=274 Identities=30% Similarity=0.465 Sum_probs=253.8
Q ss_pred CceEEEEeCC--CCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCcc
Q psy6348 1 KYDGLVVRSD--TKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQG 77 (333)
Q Consensus 1 ~~daliv~s~--~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~ 77 (333)
++|++|+++. +++++++|+++| ||+|+++|+|+||||+++|+++||.|+|+||+|+.+||||++++||+++|+++++
T Consensus 62 ~ad~li~~~~~~~~~~~~~l~~~p~Lk~i~~~g~G~d~id~~~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~ 141 (351)
T 3jtm_A 62 DLHVLISTPFHPAYVTAERIKKAKNLKLLLTAGIGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPG 141 (351)
T ss_dssp TCSEEEECTTSCCCBCHHHHHHCSSCCEEEESSSCCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCEEEEEccCCCCCCCHHHHhhCCCCeEEEEeCeeecccCHHHHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHH
Confidence 6899998763 579999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcCcccccC--CCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc-ChhhhccCC
Q psy6348 78 CQSLKEGKWDRKL--YTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL-GLEDIWPLA 153 (333)
Q Consensus 78 ~~~~~~g~w~~~~--~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~-~l~ell~~a 153 (333)
++.+++|.|.+.. ..+.+|+||||||||+|+||+.+|+++++|||+|++||++. +.+.+.+.|+..+ ++++++++|
T Consensus 142 ~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~a 221 (351)
T 3jtm_A 142 YNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKC 221 (351)
T ss_dssp HHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGC
T ss_pred HHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcC
Confidence 9999999998542 34789999999999999999999999999999999999986 5666777888776 899999999
Q ss_pred CEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCc
Q psy6348 154 DYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPK 233 (333)
Q Consensus 154 DvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pn 233 (333)
|+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|++||++|+++||+||||++||++.+ +|||++||
T Consensus 222 DvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~--~pL~~~~n 299 (351)
T 3jtm_A 222 DVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKD--HPWRYMPN 299 (351)
T ss_dssp SEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTT--CGGGTSTT
T ss_pred CEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCCCCCCCCCCC--ChhhcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999996643 79999999
Q ss_pred EEEccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCcccc
Q psy6348 234 VIVTPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNA 278 (333)
Q Consensus 234 vi~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~ 278 (333)
|++|||+|++|.|++.+++..+++|+.+|..|++. .+.|.|+.
T Consensus 300 vilTPHia~~t~ea~~~~~~~~~~nl~~~~~g~~~--~~~~~i~~ 342 (351)
T 3jtm_A 300 QAMTPHTSGTTIDAQLRYAAGTKDMLERYFKGEDF--PTENYIVK 342 (351)
T ss_dssp BCCCCSCGGGSHHHHHHHHHHHHHHHHHHHHTCCC--CGGGEEEE
T ss_pred EEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCC--CCceEEec
Confidence 99999999999999999999999999999888732 35666654
No 11
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=9.9e-66 Score=499.77 Aligned_cols=269 Identities=19% Similarity=0.305 Sum_probs=247.5
Q ss_pred ceEEEEeCCCCCCHHHhcccC-cceEEE-cccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 2 YDGLVVRSDTKVTAEVLQASN-LQVVGR-AGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 2 ~daliv~s~~~v~~~~l~~~~-Lk~I~~-~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
+|+++ +.+++++++|+++| ||+|++ .|+|+||||+++|+++||.|+|+|++|+.+||||++++||+++|+++++++
T Consensus 77 ~~~i~--~~~~i~~~~l~~~p~Lk~I~~~~~~G~d~iD~~~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~ 154 (365)
T 4hy3_A 77 ARYII--GQPPLSAETLARMPALRSILNVESNLLNNMPYEVLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADI 154 (365)
T ss_dssp EEEEE--ECCCCCHHHHTTCTTCCEEECCSSSCCSCSCTTHHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHH
T ss_pred eEEEE--eCCCCCHHHHhhCCCCeEEEEecccccCcccHHHHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHH
Confidence 45554 34799999999999 999997 489999999999999999999999999999999999999999999999999
Q ss_pred hhhcCc--cccc-CCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEE
Q psy6348 80 SLKEGK--WDRK-LYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYI 156 (333)
Q Consensus 80 ~~~~g~--w~~~-~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV 156 (333)
.+|+|+ |.+. .+.+.+++|||+||||+|+||+.+|+++++|||+|++|||+.+.+.+.+.|+...++++++++||+|
T Consensus 155 ~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV 234 (365)
T 4hy3_A 155 AFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFI 234 (365)
T ss_dssp HHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEE
T ss_pred HHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEE
Confidence 999998 5432 3468999999999999999999999999999999999999887776777888888999999999999
Q ss_pred EEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcEEE
Q psy6348 157 TVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIV 236 (333)
Q Consensus 157 ~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnvi~ 236 (333)
++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|++||++|+|+ |+||||++||++.+ +|||++|||++
T Consensus 235 ~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~--~pL~~~~nvil 311 (365)
T 4hy3_A 235 FVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLD--HPVRSLKGFIR 311 (365)
T ss_dssp EECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTT--CGGGTCTTEEE
T ss_pred EEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCC--ChhhcCCCEEE
Confidence 9999999999999999999999999999999999999999999999999998 99999999996543 69999999999
Q ss_pred ccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCccccc
Q psy6348 237 TPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNAP 279 (333)
Q Consensus 237 TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~~ 279 (333)
|||+|++|.|++.+++..+++||.++..|+ ++.++||.+
T Consensus 312 TPHia~~t~e~~~~~~~~~~~ni~~~~~G~----~~~~~vn~~ 350 (365)
T 4hy3_A 312 SAHRAGALDSAFKKMGDMVLEDMDLMDRGL----PPMRCKRAE 350 (365)
T ss_dssp CCSCSSCCHHHHHHHHHHHHHHHHHHHTTC----CCCSSEECC
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHcCC----Ccccccccc
Confidence 999999999999999999999999999998 788999963
No 12
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=3.5e-65 Score=518.54 Aligned_cols=301 Identities=46% Similarity=0.704 Sum_probs=285.3
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
++|++++++.+++++++|+++| ||+|+++|+|+||||+++|+++||.|+|+|++|+.+||||++++||+++|+++++++
T Consensus 44 ~~d~li~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~ 123 (529)
T 1ygy_A 44 EADALLVRSATTVDAEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADA 123 (529)
T ss_dssp GCSEEEECSSSCBCHHHHHTCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred CCEEEEEcCCCCCCHHHHhhCCCCcEEEECCcCcCccCHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHH
Confidence 5899999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEe
Q psy6348 80 SLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVH 159 (333)
Q Consensus 80 ~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~ 159 (333)
.+|+|+|.+..+.|.+++|+|+||||+|+||+++|++|+++||+|++|||+.+.+.+.+.|+...++++++++||+|++|
T Consensus 124 ~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~e~~~~aDvV~l~ 203 (529)
T 1ygy_A 124 SLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVH 203 (529)
T ss_dssp HHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEEC
T ss_pred HHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCcEEcCHHHHHhcCCEEEEC
Confidence 99999998877789999999999999999999999999999999999999887766777888877999999999999999
Q ss_pred cCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcEEEccC
Q psy6348 160 TPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPH 239 (333)
Q Consensus 160 ~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnvi~TPH 239 (333)
+|.+++|+++++++.++.||+|+++||++||+++|+++|+++|++|+++||++|||+.||..+ +|||++||+++|||
T Consensus 204 ~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~---~~L~~~~~vilTPh 280 (529)
T 1ygy_A 204 LPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTD---SPLFELAQVVVTPH 280 (529)
T ss_dssp CCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSC---CGGGGCTTEEECSS
T ss_pred CCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCC---chHHhCCCEEEccc
Confidence 999999999999999999999999999999999999999999999999999999999999753 69999999999999
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCcccccccCcccCCCCCchHHHHHHHhHHHHHHhcCC
Q psy6348 240 LGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNAPALAASRNPENTSWISLARSLGKISSQLLQTS 310 (333)
Q Consensus 240 i~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 310 (333)
++++|.|++.+++..+++|+.++.+|+ .+.|+||.+. ++..+++.||+.|++++|+++.|++.++
T Consensus 281 ~~~~t~ea~~~~~~~~~~~l~~~l~~~----~~~~~v~~~~--~~~hd~i~P~l~La~~lg~~~~qla~g~ 345 (529)
T 1ygy_A 281 LGASTAEAQDRAGTDVAESVRLALAGE----FVPDAVNVGG--GVVNEEVAPWLDLVRKLGVLAGVLSDEL 345 (529)
T ss_dssp CSSCBHHHHHHHHHHHHHHHHHHHTTC----CCTTBCSCCS--TTSCTTTTTHHHHHHHHHHHHHHTSSSC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHcCC----CCCcccCCcc--cccchhhhhHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999998887 7889999864 5677889999999999999999997654
No 13
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=5.4e-66 Score=495.01 Aligned_cols=273 Identities=25% Similarity=0.364 Sum_probs=244.1
Q ss_pred CceEEEEeCCCCCCHHHh-cccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCcc-
Q psy6348 1 KYDGLVVRSDTKVTAEVL-QASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQG- 77 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l-~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~- 77 (333)
++|++++++ .++ +++| +++| ||+|++.|+|+||||+++|+++||.|+|+||+|+.+||||++++||+++|+++++
T Consensus 40 ~ad~l~~~~-~~~-~~~l~~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~ 117 (324)
T 3evt_A 40 QIEVMYGNH-PLL-KTILARPTNQLKFVQVISAGVDYLPLKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAW 117 (324)
T ss_dssp GEEEEESCC-THH-HHHHHSTTCCCCEEECSSSCCTTSCHHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred CcEEEEECC-cCh-HHHHHhhCCCceEEEECCccccccCHHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHH
Confidence 468877665 467 9999 7888 9999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEE
Q psy6348 78 CQSLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYIT 157 (333)
Q Consensus 78 ~~~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~ 157 (333)
++.+++|.|.+.. .+.+++|||+||||+|+||+.+|+++++|||+|++||++..............++++++++||+|+
T Consensus 118 ~~~~~~~~W~~~~-~~~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~ 196 (324)
T 3evt_A 118 LNQRGARQWALPM-TTSTLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIV 196 (324)
T ss_dssp HHHTTTCCSSCSS-CCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEE
T ss_pred HHHHhcCCcccCC-CCccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEE
Confidence 9999999998654 689999999999999999999999999999999999997643211111233458999999999999
Q ss_pred EecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcEEEc
Q psy6348 158 VHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVT 237 (333)
Q Consensus 158 l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnvi~T 237 (333)
+|+|+|++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+++||+||||++||++.. +|||++|||++|
T Consensus 197 l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~--~pL~~~~nvilT 274 (324)
T 3evt_A 197 NALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTD--HPLWQRDDVLIT 274 (324)
T ss_dssp ECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTT--CGGGGCSSEEEC
T ss_pred EcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCC--ChhhcCCCEEEc
Confidence 999999999999999999999999999999999999999999999999999999999999996543 799999999999
Q ss_pred cCCCCCcHHHHHHHHHHHHHHHHHhH-cCCCCCCCCCCcccccccC
Q psy6348 238 PHLGASTKEAQIRVAVEIAEQFIALA-NTNPQYTSIQGVLNAPALA 282 (333)
Q Consensus 238 PHi~~~t~ea~~~~~~~~~~~i~~~~-~~~~~~~~~~~~vn~~~~~ 282 (333)
||+|++|.|++.+++..+++|+.+|. +|. ++.|.||++...
T Consensus 275 PHia~~t~~~~~~~~~~~~~nl~~~l~~~~----~~~n~V~~~~~~ 316 (324)
T 3evt_A 275 PHISGQIAHFRATVFPIFAANFAQFVKDGT----LVRNQVDLNRGY 316 (324)
T ss_dssp CSCTTCCCCHHHHHHHHHHHHHHHHHHHSC----CCSCBCC-----
T ss_pred CccccChHHHHHHHHHHHHHHHHHHHhCCC----CCCceECccccc
Confidence 99999999999999999999999975 555 578999987543
No 14
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-65 Score=491.25 Aligned_cols=263 Identities=62% Similarity=1.030 Sum_probs=248.7
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
++|++++++.+++++++|+++| ||+|++.|+|+||||+++|+++||.|+|+|++|+.+||||++++||++.|+++.+++
T Consensus 67 ~~d~li~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~ 146 (335)
T 2g76_A 67 DCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATA 146 (335)
T ss_dssp GCSEEEECSSSCBCHHHHHHCSSCCEEEESSSSCTTBCHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred CceEEEEcCCCCCCHHHHhhCCCCcEEEECCCCcchhChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHH
Confidence 5799999988899999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEe
Q psy6348 80 SLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVH 159 (333)
Q Consensus 80 ~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~ 159 (333)
.+|+|.|.+..+.+.++.|+||||||+|+||+.+|+++++|||+|++|||+.+.+.+.+.|++..++++++++||+|++|
T Consensus 147 ~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~ 226 (335)
T 2g76_A 147 SMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVH 226 (335)
T ss_dssp HHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHHHHHHTTCEECCHHHHGGGCSEEEEC
T ss_pred HHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCceeCCHHHHHhcCCEEEEe
Confidence 99999998765678999999999999999999999999999999999999887666677788777999999999999999
Q ss_pred cCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcEEEccC
Q psy6348 160 TPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPH 239 (333)
Q Consensus 160 ~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnvi~TPH 239 (333)
+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+++||+||||++||+.+ +|||++||+++|||
T Consensus 227 ~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP~~~---~~L~~~~nvilTPH 303 (335)
T 2g76_A 227 TPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRD---RALVDHENVISCPH 303 (335)
T ss_dssp CCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCSC---CHHHHSTTEEECSS
T ss_pred cCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEeecCCCCCCC---chHHhCCCEEECCc
Confidence 999999999999999999999999999999999999999999999999999999999999543 69999999999999
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHhHcCC
Q psy6348 240 LGASTKEAQIRVAVEIAEQFIALANTN 266 (333)
Q Consensus 240 i~~~t~ea~~~~~~~~~~~i~~~~~~~ 266 (333)
++++|.|++.++++.+++|+.+|..|+
T Consensus 304 ~~~~t~e~~~~~~~~~~~nl~~~~~g~ 330 (335)
T 2g76_A 304 LGASTKEAQSRCGEEIAVQFVDMVKGK 330 (335)
T ss_dssp CTTCBHHHHHHHHHHHHHHHHHHC---
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999988886
No 15
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=9.3e-66 Score=495.32 Aligned_cols=274 Identities=27% Similarity=0.431 Sum_probs=250.3
Q ss_pred CceEEEEeCCCCCCHHHhcccC---cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCcc
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN---LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQG 77 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~---Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~ 77 (333)
++|++++++.+++++++|+++| ||+|++.|+|+||||+++|+++||.|+|+||+|+.+||||++++||++.|+++.+
T Consensus 44 ~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~ 123 (333)
T 1dxy_A 44 GFDGINSLQTTPYAAGVFEKMHAYGIKFLTIRNVGTDNIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKV 123 (333)
T ss_dssp TCSEEEECCSSCBCHHHHHHHHHTTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred CCeEEEEcCCCCCCHHHHHhCcccCceEEEEcCcccCccCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHH
Confidence 5899999988899999999875 9999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcCcccc-cCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEE
Q psy6348 78 CQSLKEGKWDR-KLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYI 156 (333)
Q Consensus 78 ~~~~~~g~w~~-~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV 156 (333)
++.+|+|.|.+ ....+.++.|+|+||||+|+||+.+|+++++|||+|++||++.... +.+ .+.+.++++++++||+|
T Consensus 124 ~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~~l~ell~~aDvV 201 (333)
T 1dxy_A 124 QAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG-DHP-DFDYVSLEDLFKQSDVI 201 (333)
T ss_dssp HHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS-CCT-TCEECCHHHHHHHCSEE
T ss_pred HHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh-hHh-ccccCCHHHHHhcCCEE
Confidence 99999999964 4456889999999999999999999999999999999999987433 222 24556899999999999
Q ss_pred EEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCC-----------CCccc
Q psy6348 157 TVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPP-----------KSEQT 225 (333)
Q Consensus 157 ~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~-----------~~~~~ 225 (333)
++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+++||+||||++||+ +++..
T Consensus 202 ~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~ 281 (333)
T 1dxy_A 202 DLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLW 281 (333)
T ss_dssp EECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHH
T ss_pred EEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccch
Confidence 9999999999999999999999999999999999999999999999999999999999999983 11112
Q ss_pred hhhcCCCcEEEccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCcccccc
Q psy6348 226 FELIKHPKVIVTPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNAPA 280 (333)
Q Consensus 226 ~~L~~~pnvi~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~~~ 280 (333)
+|||++|||++|||+|++|.|++.+++..+++|+.+|..|+ ++.|.||.|.
T Consensus 282 ~pL~~~~nvi~TPHia~~t~e~~~~~~~~~~~nl~~~~~g~----~~~~~v~~~~ 332 (333)
T 1dxy_A 282 DELLGMPNVVLSPHIAYYTETAVHNMVYFSLQHLVDFLTKG----ETSTEVTGPA 332 (333)
T ss_dssp HHHHTCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHHHS----CCTTEECC--
T ss_pred hHHhcCCCEEECCccccChHHHHHHHHHHHHHHHHHHHcCC----CCCceeCCCC
Confidence 58999999999999999999999999999999999988887 7889999873
No 16
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=1.9e-64 Score=486.25 Aligned_cols=272 Identities=28% Similarity=0.385 Sum_probs=250.7
Q ss_pred CceEEEEeCCCCCCHHHhcccC---cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCcc
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN---LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQG 77 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~---Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~ 77 (333)
++|++++++.+++++++|+++| ||+|++.|+|+||||+++|+++||.|+|+||+|+.+||||++++||+++|+++++
T Consensus 46 ~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~ 125 (333)
T 1j4a_A 46 GADGVVVYQQLDYIAETLQALADNGITKMSLRNVGVDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAM 125 (333)
T ss_dssp TCSEEEECCSSCBCHHHHHHHHHTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCcEEEEcCCCCCCHHHHHhccccCCeEEEECCcccccccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHH
Confidence 5799999887899999999874 9999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcccc-ChhhhccCCCEE
Q psy6348 78 CQSLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASL-GLEDIWPLADYI 156 (333)
Q Consensus 78 ~~~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~-~l~ell~~aDvV 156 (333)
++.+|+|.|.+....+.++.|+|+||||+|+||+.+|+++++|||+|++||++.... +.+ .+.+. ++++++++||+|
T Consensus 126 ~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~~~l~ell~~aDvV 203 (333)
T 1j4a_A 126 DEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE-LEK-KGYYVDSLDDLYKQADVI 203 (333)
T ss_dssp HHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHH-TTCBCSCHHHHHHHCSEE
T ss_pred HHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh-HHh-hCeecCCHHHHHhhCCEE
Confidence 999999999765567899999999999999999999999999999999999987654 333 35566 899999999999
Q ss_pred EEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCC--CCc-----cch---
Q psy6348 157 TVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPP--KSE-----QTF--- 226 (333)
Q Consensus 157 ~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~--~~~-----~~~--- 226 (333)
++|+|++++|+++++++.|+.||+|++|||++||+++|+++|+++|++|+++||+||||++||+ +.+ ..+
T Consensus 204 ~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~ 283 (333)
T 1j4a_A 204 SLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARL 283 (333)
T ss_dssp EECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHH
T ss_pred EEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccch
Confidence 9999999999999999999999999999999999999999999999999999999999999994 111 112
Q ss_pred -hhcCCCcEEEccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCcccc
Q psy6348 227 -ELIKHPKVIVTPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNA 278 (333)
Q Consensus 227 -~L~~~pnvi~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~ 278 (333)
|||++|||++|||+|++|.|++.++++.+++|+.+|..|+ ++.|.||.
T Consensus 284 ~~L~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~~~g~----~~~~~v~~ 332 (333)
T 1j4a_A 284 ADLIARPNVLVTPKTAFYTTHAVRNMVVKAFDNNLELVEGK----EAETPVKV 332 (333)
T ss_dssp HHHHHCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTTC----CCSSBCCC
T ss_pred hhHHhCCCEEECCccccCHHHHHHHHHHHHHHHHHHHHcCC----CCCccccC
Confidence 6999999999999999999999999999999999998887 78888884
No 17
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=2.7e-65 Score=489.86 Aligned_cols=269 Identities=26% Similarity=0.345 Sum_probs=242.0
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
++|+++++. ++++++|+++| ||+|++.|+|+||||++++. +||.|+|+||+|+.+||||++++||+++|+++.+++
T Consensus 47 ~ad~li~~~--~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~-~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~ 123 (324)
T 3hg7_A 47 EAHILMAEP--ARAKPLLAKANKLSWFQSTYAGVDVLLDARCR-RDYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYRE 123 (324)
T ss_dssp GCSEEEECH--HHHGGGGGGCTTCCEEEESSSCCGGGSCTTSC-CSSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred CCEEEEECC--CCCHHHHhhCCCceEEEECCCCCCccChHHHh-CCEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHH
Confidence 478988854 56789999999 99999999999999998875 599999999999999999999999999999999999
Q ss_pred hhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEe
Q psy6348 80 SLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVH 159 (333)
Q Consensus 80 ~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~ 159 (333)
.+++|.|.+. .+.+++|||+||||+|+||+.+|+++++|||+|++||++.........+....++++++++||+|++|
T Consensus 124 ~~~~g~W~~~--~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~ 201 (324)
T 3hg7_A 124 QQKQRLWQSH--PYQGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSV 201 (324)
T ss_dssp HHHTTCCCCC--CCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEEC
T ss_pred HHhhCCCcCC--CCcccccceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEe
Confidence 9999999863 57899999999999999999999999999999999999763221111223345899999999999999
Q ss_pred cCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcEEEccC
Q psy6348 160 TPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPH 239 (333)
Q Consensus 160 ~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnvi~TPH 239 (333)
+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+++||+||||++||++.+ +|||++|||++|||
T Consensus 202 lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~--~pL~~~~nvilTPH 279 (324)
T 3hg7_A 202 LPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPAD--SPLWGQPNLIITPH 279 (324)
T ss_dssp CCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTT--CTTTTCTTEEECCS
T ss_pred CCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCC--ChhhcCCCEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999996543 79999999999999
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCcccccccC
Q psy6348 240 LGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNAPALA 282 (333)
Q Consensus 240 i~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~~~~~ 282 (333)
+|++|.+ .++++.+++|+.+|..|+ ++.|.||++...
T Consensus 280 ia~~t~~--~~~~~~~~~nl~~~~~G~----~~~~~V~~~~~~ 316 (324)
T 3hg7_A 280 NSAYSFP--DDVAQIFVRNYIRFIDGQ----PLDGKIDFDKGY 316 (324)
T ss_dssp CSSCCCH--HHHHHHHHHHHHHHHTTC----CCTTBCCCC---
T ss_pred CccccHH--HHHHHHHHHHHHHHHcCC----CCcceEChhhhc
Confidence 9999976 479999999999999998 899999987654
No 18
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=2.1e-64 Score=485.55 Aligned_cols=271 Identities=26% Similarity=0.381 Sum_probs=248.4
Q ss_pred CceEEEEeCCCCCCHHHhcccC---cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCcc
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN---LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQG 77 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~---Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~ 77 (333)
++|++++++.+++++++|+++| ||+|++.|+|+||||+++|+++||.|+|+||+|+.+||||++++||+++|+++.+
T Consensus 45 ~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~ 124 (331)
T 1xdw_A 45 GFDAVILRGNCFANKQNLDIYKKLGVKYILTRTAGTDHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYT 124 (331)
T ss_dssp TCSEEEECTTCCBCHHHHHHHHHHTCCEEEESSSCCTTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred CCeEEEEeCCCCCCHHHHhhCcccCceEEEEccccccccCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHH
Confidence 5899999988899999999875 9999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcCcccc-cCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEE
Q psy6348 78 CQSLKEGKWDR-KLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYI 156 (333)
Q Consensus 78 ~~~~~~g~w~~-~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV 156 (333)
++.+++|.|.. ....+.++.|+|+||||+|+||+.+|+++++|||+|++||++.... +. ..+.+.++++++++||+|
T Consensus 125 ~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~-~~~~~~~l~ell~~aDvV 202 (331)
T 1xdw_A 125 TSRTAKKNFKVDAFMFSKEVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG-IE-DYCTQVSLDEVLEKSDII 202 (331)
T ss_dssp HHHHTTTCCCCCSTTCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS-CT-TTCEECCHHHHHHHCSEE
T ss_pred HHHHHcCCCccccCcCccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH-HH-hccccCCHHHHHhhCCEE
Confidence 99999999964 4456889999999999999999999999999999999999987433 22 234556899999999999
Q ss_pred EEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCC---C----cc----c
Q psy6348 157 TVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPK---S----EQ----T 225 (333)
Q Consensus 157 ~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~---~----~~----~ 225 (333)
++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+++||+||||++||+. + +. .
T Consensus 203 ~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~ 282 (331)
T 1xdw_A 203 TIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLF 282 (331)
T ss_dssp EECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHH
T ss_pred EEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccch
Confidence 99999999999999999999999999999999999999999999999999999999999999942 1 01 1
Q ss_pred hhhcCC-CcEEEccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCccc
Q psy6348 226 FELIKH-PKVIVTPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLN 277 (333)
Q Consensus 226 ~~L~~~-pnvi~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn 277 (333)
+|||++ |||++|||+|++|.|++.+++..+++|+.+|..|+ ++.|.||
T Consensus 283 ~~L~~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~~~g~----~~~~~v~ 331 (331)
T 1xdw_A 283 EKLVDLYPRVLITPHLGSYTDEAVKNMVEVSYQNLKDLAETG----DCPNKIK 331 (331)
T ss_dssp HHHHHTTTTEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHHS----CCTTBCC
T ss_pred HHHHhCCCCEEEcCccccChHHHHHHHHHHHHHHHHHHHcCC----CCCCCCC
Confidence 379999 99999999999999999999999999999988877 6788876
No 19
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.2e-63 Score=475.69 Aligned_cols=263 Identities=41% Similarity=0.648 Sum_probs=249.3
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
++|++++++.+++++++|+++| ||+|++.|+|+||||+++|+++||.|+|+||+|+.+||||++++||+++|+++.+++
T Consensus 44 ~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~ 123 (307)
T 1wwk_A 44 DVEAIIVRSKPKVTRRVIESAPKLKVIARAGVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADR 123 (307)
T ss_dssp TCSEEEESSCSCBCHHHHTTCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred CCEEEEEcCCCCCCHHHHhhCCCCeEEEECCccccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHH
Confidence 5899999887789999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEe
Q psy6348 80 SLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVH 159 (333)
Q Consensus 80 ~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~ 159 (333)
.+|+|.|.+..+.+.++.|+|+||||+|+||+.+|+++++|||+|++||++...+.+.+.|+...++++++++||+|++|
T Consensus 124 ~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~ 203 (307)
T 1wwk_A 124 KMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIH 203 (307)
T ss_dssp HHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEEC
T ss_pred HHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCChhhHhhcCccccCHHHHHhhCCEEEEe
Confidence 99999998655678999999999999999999999999999999999999887666677788777999999999999999
Q ss_pred cCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcEEEccC
Q psy6348 160 TPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPH 239 (333)
Q Consensus 160 ~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnvi~TPH 239 (333)
+|++++|+++++++.|+.||+|++|||++||+++|+++|.++|++|+++||++|||++||.+.+ +|||++||+++|||
T Consensus 204 ~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~--~~L~~~~nviltPh 281 (307)
T 1wwk_A 204 VPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKD--HPLTKFDNVVLTPH 281 (307)
T ss_dssp CCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTT--CGGGGCTTEEECSS
T ss_pred cCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCC--ChHHhCCCEEECCc
Confidence 9999999999999999999999999999999999999999999999999999999999996432 69999999999999
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHhHcC
Q psy6348 240 LGASTKEAQIRVAVEIAEQFIALANT 265 (333)
Q Consensus 240 i~~~t~ea~~~~~~~~~~~i~~~~~~ 265 (333)
++++|.|++.++.+.+++|+.+|..|
T Consensus 282 ~~~~t~~~~~~~~~~~~~nl~~~~~g 307 (307)
T 1wwk_A 282 IGASTVEAQERAGVEVAEKVVKILKG 307 (307)
T ss_dssp CTTCBHHHHHHHHHHHHHHHHHHHTC
T ss_pred cccCcHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999998765
No 20
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=2.7e-63 Score=486.91 Aligned_cols=272 Identities=28% Similarity=0.384 Sum_probs=251.7
Q ss_pred CceEEEEeC--CCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCcc
Q psy6348 1 KYDGLVVRS--DTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQG 77 (333)
Q Consensus 1 ~~daliv~s--~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~ 77 (333)
++|++|+++ .+++++++|+++| ||+|++.|+|+||||+++|+++||.|+|+|++|+.+||||++++||++.|+++++
T Consensus 89 ~ad~li~~~~~~~~i~~~~l~~~p~Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~ 168 (393)
T 2nac_A 89 DADVVISQPFWPAYLTPERIAKAKNLKLALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPS 168 (393)
T ss_dssp TCSEEEEBTTBCCCBCHHHHHHCTTCCEEEESSSCCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHH
T ss_pred CCCEEEEcCccCCCCCHHHHhhCCCCcEEEEcCccccccCHHHHhcCCEEEEeCCCcccHHHHHHHHHHHHHHHhccHHH
Confidence 579998875 4589999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcCcccccC--CCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCccc-cChhhhccCC
Q psy6348 78 CQSLKEGKWDRKL--YTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIAS-LGLEDIWPLA 153 (333)
Q Consensus 78 ~~~~~~g~w~~~~--~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~-~~l~ell~~a 153 (333)
++.+|+|.|.... ..+.+|+|||+||||+|+||+.+|+++++|||+|++||++. ..+.+.+.|+.. .++++++++|
T Consensus 169 ~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~a 248 (393)
T 2nac_A 169 HEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVC 248 (393)
T ss_dssp HHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGC
T ss_pred HHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcC
Confidence 9999999997421 34689999999999999999999999999999999999986 445566678876 4899999999
Q ss_pred CEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCc
Q psy6348 154 DYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPK 233 (333)
Q Consensus 154 DvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pn 233 (333)
|+|++|+|++++|+++|+++.|+.||+|++|||++||+++|+++|+++|++|+|+||+||||++||.+.. +|||++||
T Consensus 249 DvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~--~pL~~~~n 326 (393)
T 2nac_A 249 DVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKD--HPWRTMPY 326 (393)
T ss_dssp SEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCCTT--CGGGTSTT
T ss_pred CEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCCCCC--ChhHcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999996532 79999999
Q ss_pred EEEccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCcccc
Q psy6348 234 VIVTPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNA 278 (333)
Q Consensus 234 vi~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~ 278 (333)
|++|||+|++|.|++.+++..+++|+.+|..|+ ++.|.++.
T Consensus 327 vilTPHia~~T~e~~~~~~~~~~~nl~~~~~G~----~~~~~~~~ 367 (393)
T 2nac_A 327 NGMTPHISGTTLTAQARYAAGTREILECFFEGR----PIRDEYLI 367 (393)
T ss_dssp BCCCCSCTTCSHHHHHHHHHHHHHHHHHHHHTC----CCCGGGEE
T ss_pred EEECCCCCcCcHHHHHHHHHHHHHHHHHHHcCC----CCcceeEe
Confidence 999999999999999999999999999988887 67777664
No 21
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=2.4e-63 Score=483.76 Aligned_cols=275 Identities=28% Similarity=0.404 Sum_probs=250.9
Q ss_pred CceEEEEeCC--CCCCHHHhcccC-cceEEEcccCcCccChhhHhhC--CcEEEECCCCCchHHHHHHHHHHHHHhcCCC
Q psy6348 1 KYDGLVVRSD--TKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRK--GVLVLNAPGGNFISACELTCSLISALSRNVP 75 (333)
Q Consensus 1 ~~daliv~s~--~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~--gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~ 75 (333)
++|+++++.. +++++++|+++| ||+|++.|+|+||||+++|+++ ||.|+|+||+|+.+||||++++||+++|+++
T Consensus 60 ~~d~~i~~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~ 139 (364)
T 2j6i_A 60 DADIIITTPFHPAYITKERIDKAKKLKLVVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFV 139 (364)
T ss_dssp GCSEEEECTTSCCCBCHHHHHHCTTCCEEEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHH
T ss_pred CCeEEEecCcCCCCCCHHHHhhCCCCeEEEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChH
Confidence 5789988653 469999999999 9999999999999999999999 9999999999999999999999999999999
Q ss_pred ccchhhhcCcccccC--CCccccCCCEEEEEecChHHHHHHHHHhhCCCE-EEEEcCCC-CHHHHHhcCcccc-Chhhhc
Q psy6348 76 QGCQSLKEGKWDRKL--YTGTELYGKTLAVLGLGRIGREVALRMQAFGMK-VIGFDPMV-SVEDAAKLNIASL-GLEDIW 150 (333)
Q Consensus 76 ~~~~~~~~g~w~~~~--~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~-V~~~d~~~-~~~~a~~~gv~~~-~l~ell 150 (333)
.+++.+++|.|.+.. ..+.+|+|+||||||+|+||+.+|+++++|||+ |++||++. ..+.+.+.|+... ++++++
T Consensus 140 ~~~~~~~~g~W~~~~~~~~~~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell 219 (364)
T 2j6i_A 140 PAHEQIINHDWEVAAIAKDAYDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELV 219 (364)
T ss_dssp HHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHH
T ss_pred HHHHHHHhCCCCcCcccCCcccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHH
Confidence 999999999997432 357899999999999999999999999999997 99999876 4555667787765 899999
Q ss_pred cCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcC
Q psy6348 151 PLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIK 230 (333)
Q Consensus 151 ~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~ 230 (333)
++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||++||++.+ +|||.
T Consensus 220 ~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~--~pL~~ 297 (364)
T 2j6i_A 220 AQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKD--HPWRD 297 (364)
T ss_dssp HTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTT--CHHHH
T ss_pred hcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCC--ChHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999996543 69999
Q ss_pred C--C---cEEEccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCcccc
Q psy6348 231 H--P---KVIVTPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNA 278 (333)
Q Consensus 231 ~--p---nvi~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~ 278 (333)
+ | ||++|||+|++|.|++.+++..+++|+.+|..|++.. .+.|+||.
T Consensus 298 ~~~~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~~-~~~n~v~~ 349 (364)
T 2j6i_A 298 MRNKYGAGNAMTPHYSGTTLDAQTRYAQGTVNILESFFTGKFDY-RPQDIILL 349 (364)
T ss_dssp CCCTTSCCEEECCSCGGGSHHHHHHHHHHHHHHHHHHHTTCCCC-CGGGEEEB
T ss_pred ccCCccCcEEECCccCcCCHHHHHHHHHHHHHHHHHHHcCCCCC-CCCceecC
Confidence 9 9 9999999999999999999999999999988886222 35666664
No 22
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=9.2e-63 Score=470.73 Aligned_cols=264 Identities=39% Similarity=0.578 Sum_probs=248.9
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
++|++++++.+++++++|+++| ||+|++.|+|+||||+++|+++||.|+|+||+|+.+||||++++||++.|+++.+++
T Consensus 46 ~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~ 125 (313)
T 2ekl_A 46 NYDIIVVRSRTKVTKDVIEKGKKLKIIARAGIGLDNIDTEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMA 125 (313)
T ss_dssp GCSEEEECSSSCBCHHHHHHCTTCCEEEECSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred CCeEEEEcCCCCCCHHHHhhCCCCeEEEEcCCCCCccCHHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHH
Confidence 5799999888899999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEe
Q psy6348 80 SLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVH 159 (333)
Q Consensus 80 ~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~ 159 (333)
.+|+|.|. .+.+.++.|+|+||||+|+||+.+|++++++||+|++||++.....+.+.|+...++++++++||+|++|
T Consensus 126 ~~~~g~w~--~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvVvl~ 203 (313)
T 2ekl_A 126 LAKSGIFK--KIEGLELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIREKAEKINAKAVSLEELLKNSDVISLH 203 (313)
T ss_dssp HHHTTCCC--CCCCCCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEEC
T ss_pred HHHcCCCC--CCCCCCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchhHHHhcCceecCHHHHHhhCCEEEEe
Confidence 99999996 3568899999999999999999999999999999999999887665667788777999999999999999
Q ss_pred cCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcEEEccC
Q psy6348 160 TPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPH 239 (333)
Q Consensus 160 ~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnvi~TPH 239 (333)
+|++++|+++++++.++.||+|++|||++||+++|+++|.++|++|+++||++|||++||.+++...|||++|||++|||
T Consensus 204 ~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~~~L~~~~nviltPH 283 (313)
T 2ekl_A 204 VTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPPKEEWELELLKHERVIVTTH 283 (313)
T ss_dssp CCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSCCSHHHHHHHHSTTEEECCS
T ss_pred ccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCCCCcccchHhhCCCEEECCc
Confidence 99999999999999999999999999999999999999999999999999999999999976421129999999999999
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHhHcCC
Q psy6348 240 LGASTKEAQIRVAVEIAEQFIALANTN 266 (333)
Q Consensus 240 i~~~t~ea~~~~~~~~~~~i~~~~~~~ 266 (333)
++++|.|++.+++..+++|+.+|..|+
T Consensus 284 ~~~~t~~~~~~~~~~~~~n~~~~~~g~ 310 (313)
T 2ekl_A 284 IGAQTKEAQKRVAEMTTQNLLNAMKEL 310 (313)
T ss_dssp CTTCSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCcCcHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999988886
No 23
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=4e-63 Score=473.52 Aligned_cols=261 Identities=25% Similarity=0.326 Sum_probs=236.9
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCcc-C-hhh---HhhCCcEEEECCCC-CchHHHHHHHHHHHHHhcC
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNI-D-LTA---ATRKGVLVLNAPGG-NFISACELTCSLISALSRN 73 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~i-D-~~a---a~~~gI~V~n~p~~-n~~avAE~~l~l~l~~~R~ 73 (333)
++|++++++ +++++|++ | ||+|++.|+|+||| | +++ +.++||.|+|+|++ ++.+||||+++++|+++|+
T Consensus 41 ~ad~~i~~~---~~~~~l~~-~~Lk~I~~~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~ 116 (315)
T 3pp8_A 41 PADYALVWQ---PPVEMLAG-RRLKAVFVLGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRR 116 (315)
T ss_dssp CCSEEEESS---CCHHHHTT-CCCSEEEESSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTT
T ss_pred CcEEEEECC---CCHHHhCC-CCceEEEECCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhC
Confidence 589999975 47999999 9 99999999999999 7 886 78899999999986 4799999999999999999
Q ss_pred CCccchhhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcc----ccChhhh
Q psy6348 74 VPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIA----SLGLEDI 149 (333)
Q Consensus 74 i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~----~~~l~el 149 (333)
++.+++.+++|.|.+. .+.+++|||+||||+|+||+.+|+++++|||+|++||++.... .++. ..+++++
T Consensus 117 ~~~~~~~~~~g~W~~~--~~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~----~~~~~~~~~~~l~el 190 (315)
T 3pp8_A 117 FDDYQALKNQALWKPL--PEYTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSW----PGVESYVGREELRAF 190 (315)
T ss_dssp HHHHHHHHHTTCCCCC--CCCCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCC----TTCEEEESHHHHHHH
T ss_pred ChHHHHHHHhcccCCC--CCCCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhh----hhhhhhcccCCHHHH
Confidence 9999999999999764 5789999999999999999999999999999999999876421 1221 2479999
Q ss_pred ccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhc
Q psy6348 150 WPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELI 229 (333)
Q Consensus 150 l~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~ 229 (333)
+++||+|++|+|+|++|+++|+++.|+.||+|++|||+|||+++|+++|++||++|+++||+||||++||++.. +|||
T Consensus 191 l~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~--~pL~ 268 (315)
T 3pp8_A 191 LNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQE--SPLW 268 (315)
T ss_dssp HHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTT--CGGG
T ss_pred HhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCC--Chhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999996543 7999
Q ss_pred CCCcEEEccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCccccc
Q psy6348 230 KHPKVIVTPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNAP 279 (333)
Q Consensus 230 ~~pnvi~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~~ 279 (333)
++|||++|||+|++|.+ .++...+++|+.+|..|+ ++.|.||+.
T Consensus 269 ~~~nvilTPHia~~t~~--~~~~~~~~~ni~~~~~G~----~~~~~V~~~ 312 (315)
T 3pp8_A 269 RHPRVAMTPHIAAVTRP--AEAIDYISRTITQLEKGE----PVTGQVDRA 312 (315)
T ss_dssp GCTTEEECSSCSSCCCH--HHHHHHHHHHHHHHHHTC----CCCCBCCCC
T ss_pred cCCCEEECCCCCcccHH--HHHHHHHHHHHHHHHcCC----CCCceECcc
Confidence 99999999999999986 579999999999998888 788999964
No 24
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.5e-61 Score=463.67 Aligned_cols=262 Identities=27% Similarity=0.466 Sum_probs=246.5
Q ss_pred CceEEEEeCCCCCCHHHhcccC--cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccc
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN--LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGC 78 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~--Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~ 78 (333)
++|++++++.+++++++|+++| ||+|++.|+|+||||+++|+++||.|+|+||+|+.+||||++++||++.|+++.++
T Consensus 44 ~~d~~i~~~~~~~~~~~l~~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~ 123 (320)
T 1gdh_A 44 SVDALLITLNEKCRKEVIDRIPENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGE 123 (320)
T ss_dssp TCSEEEEETTSCBCHHHHHHSCTTCCEEEEESSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHhCCccceEEEECCcccccccHHHHHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHH
Confidence 5799999987899999999886 99999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCcccc---cCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcC-CCCHHHHHhcCcccc-ChhhhccCC
Q psy6348 79 QSLKEGKWDR---KLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDP-MVSVEDAAKLNIASL-GLEDIWPLA 153 (333)
Q Consensus 79 ~~~~~g~w~~---~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~-~~~~~~a~~~gv~~~-~l~ell~~a 153 (333)
+.+++|.|.. ..+.+.++.|+||||||+|+||+.+|+++++|||+|++||+ +.....+.+.|+... ++++++++|
T Consensus 124 ~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~a 203 (320)
T 1gdh_A 124 KMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVS 203 (320)
T ss_dssp HHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHC
T ss_pred HHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhC
Confidence 9999999963 23467899999999999999999999999999999999999 876665666788777 899999999
Q ss_pred CEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCc
Q psy6348 154 DYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPK 233 (333)
Q Consensus 154 DvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pn 233 (333)
|+|++|+|++++|+++++++.++.||+|++|||++||+++|+++|.++|++|+++||++|||++||+. .+|||++||
T Consensus 204 DvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP~~---~~~L~~~~n 280 (320)
T 1gdh_A 204 QFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNI---NEGYYDLPN 280 (320)
T ss_dssp SEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSC---CTTGGGCTT
T ss_pred CEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCCCC---CChhhhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999933 369999999
Q ss_pred EEEccCCCCCcHHHHHHHHHHHHHHHHHhHcCC
Q psy6348 234 VIVTPHLGASTKEAQIRVAVEIAEQFIALANTN 266 (333)
Q Consensus 234 vi~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~ 266 (333)
+++|||++++|.|++.+++..+ +|+.+|..|+
T Consensus 281 viltPH~~~~t~~~~~~~~~~~-~nl~~~~~g~ 312 (320)
T 1gdh_A 281 TFLFPHIGSAATQAREDMAHQA-NDLIDALFGG 312 (320)
T ss_dssp EEECSSCTTCBHHHHHHHHHHH-HHHHHHHHTT
T ss_pred EEECCcCCcCcHHHHHHHHHHH-HHHHHHHcCC
Confidence 9999999999999999999999 9999988886
No 25
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=1.1e-61 Score=469.31 Aligned_cols=275 Identities=33% Similarity=0.468 Sum_probs=249.0
Q ss_pred ceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchh
Q psy6348 2 YDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQS 80 (333)
Q Consensus 2 ~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~ 80 (333)
+|++++...+++++++|+++| ||+|++.|+|+||||+++|+++||.|+|+||+|+.+||||++++||++.|+++.+++.
T Consensus 64 ~~~~~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~ 143 (347)
T 1mx3_A 64 AVGALMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQA 143 (347)
T ss_dssp EEEEEECSSSCBCHHHHTTCSSCCEEEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred CeEEEEeCCCCCCHHHHhhCCCCCEEEEcccccCcccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 577888877899999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCcccccC------CC-ccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcccc-ChhhhccC
Q psy6348 81 LKEGKWDRKL------YT-GTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASL-GLEDIWPL 152 (333)
Q Consensus 81 ~~~g~w~~~~------~~-g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~-~l~ell~~ 152 (333)
+++|.|.... .. +.++.|+|+||||+|+||+.+|+++++|||+|++||++.....+...|+..+ ++++++++
T Consensus 144 ~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~ 223 (347)
T 1mx3_A 144 LREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFH 223 (347)
T ss_dssp HHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHH
T ss_pred HHcCCcccccccccccccCccCCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhc
Confidence 9999995321 12 3689999999999999999999999999999999999875545566787665 89999999
Q ss_pred CCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCC
Q psy6348 153 ADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHP 232 (333)
Q Consensus 153 aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~p 232 (333)
||+|++|+|++++|+++++++.|+.||+|++|||++||+++|+++|+++|++|+++||++|||+.||.... .+||+.+|
T Consensus 224 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~-~~~L~~~~ 302 (347)
T 1mx3_A 224 SDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFS-QGPLKDAP 302 (347)
T ss_dssp CSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTT-SSTTTTCS
T ss_pred CCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCC-CchHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999996421 26899999
Q ss_pred cEEEccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCcccc
Q psy6348 233 KVIVTPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNA 278 (333)
Q Consensus 233 nvi~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~ 278 (333)
|+++|||++++|.+++.++.+.+++|+.++..|++.. .+.|+||+
T Consensus 303 nvi~tPHia~~t~~~~~~~~~~~~~ni~~~~~g~~~~-~l~~~v~~ 347 (347)
T 1mx3_A 303 NLICTPHAAWYSEQASIEMREEAAREIRRAITGRIPD-SLKNCVNK 347 (347)
T ss_dssp SEEECSSCTTCCHHHHHHHHHHHHHHHHHHHHSCTTT-TCSSBCC-
T ss_pred CEEEEchHHHHHHHHHHHHHHHHHHHHHHHHcCCCCc-ccCCCCCC
Confidence 9999999999999999999999999999988886221 24577764
No 26
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=1.1e-61 Score=466.86 Aligned_cols=266 Identities=29% Similarity=0.401 Sum_probs=248.4
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
++|++++++.+++++++|+++| ||+|++.|+|+||||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++
T Consensus 65 ~~d~~i~~~~~~~~~~~l~~~p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~ 144 (333)
T 3ba1_A 65 SIRAVVGNSNAGADAELIDALPKLEIVSSFSVGLDKVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDK 144 (333)
T ss_dssp TEEEEEECSSSCBCHHHHHHCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred CCEEEEEcCCCCCCHHHHhhCCCCcEEEEcCccccccCHHHHHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHH
Confidence 5799999988899999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCcccccC-CCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccc-cChhhhccCCCEEE
Q psy6348 80 SLKEGKWDRKL-YTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIAS-LGLEDIWPLADYIT 157 (333)
Q Consensus 80 ~~~~g~w~~~~-~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~-~~l~ell~~aDvV~ 157 (333)
.+|+|.|.+.. ..+.+++|+++||||+|+||+.+|++++++||+|++||++.... .|+.. .++++++++||+|+
T Consensus 145 ~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~----~g~~~~~~l~ell~~aDvVi 220 (333)
T 3ba1_A 145 YVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPN----TNYTYYGSVVELASNSDILV 220 (333)
T ss_dssp HHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTT----CCSEEESCHHHHHHTCSEEE
T ss_pred HHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhc----cCceecCCHHHHHhcCCEEE
Confidence 99999997533 35789999999999999999999999999999999999976432 25543 48999999999999
Q ss_pred EecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcEEEc
Q psy6348 158 VHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVT 237 (333)
Q Consensus 158 l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnvi~T 237 (333)
+|+|.+++|+++++++.++.||+|++|||++||.++|+++|.++|++|+++||++|||++||.+. +||+++|||++|
T Consensus 221 l~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~---~~L~~~~nvilt 297 (333)
T 3ba1_A 221 VACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVP---EKLFGLENVVLL 297 (333)
T ss_dssp ECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTTCCC---GGGGGCTTEEEC
T ss_pred EecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCCCCc---chhhcCCCEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999654 689999999999
Q ss_pred cCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCccc
Q psy6348 238 PHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLN 277 (333)
Q Consensus 238 PHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn 277 (333)
||+|++|.|++.++++.+++|+.+|..|+ ++.|.||
T Consensus 298 PH~~~~t~e~~~~~~~~~~~nl~~~~~g~----~~~~~Vn 333 (333)
T 3ba1_A 298 PHVGSGTVETRKVMADLVVGNLEAHFSGK----PLLTPVV 333 (333)
T ss_dssp SSCTTCSHHHHHHHHHHHHHHHHHHHHTC----CCSSBCC
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHHHHcCC----CCCCCCC
Confidence 99999999999999999999999988887 7788876
No 27
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=1.3e-61 Score=462.37 Aligned_cols=264 Identities=34% Similarity=0.554 Sum_probs=244.8
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
++|++++++.+++++++|+++| ||+|++.|+|+||||+++|+++||.|+|+||+|+.+||||++++||+++|+++.+++
T Consensus 43 ~~d~~i~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~ 122 (311)
T 2cuk_A 43 GAVGLIPTVEDRIDAEVMDRAKGLKVIACYSVGVDHVDLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAA 122 (311)
T ss_dssp TCSEEECCTTSCBCHHHHHHSTTCCEEECSSSCCTTBCHHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred CCeEEEEcCCCCCCHHHHhhCCCCeEEEECCcCccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHH
Confidence 5799999887899999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCccccc---CCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEE
Q psy6348 80 SLKEGKWDRK---LYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYI 156 (333)
Q Consensus 80 ~~~~g~w~~~---~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV 156 (333)
.+|+|.|.+. .+.+.++.|+|+||||+|+||+.+|++++++||+|++||++..... +...++++++++||+|
T Consensus 123 ~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-----~~~~~l~ell~~aDvV 197 (311)
T 2cuk_A 123 YARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP-----YPFLSLEELLKEADVV 197 (311)
T ss_dssp HHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS-----SCBCCHHHHHHHCSEE
T ss_pred HHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc-----cccCCHHHHHhhCCEE
Confidence 9999999632 2357899999999999999999999999999999999999874332 3455899999999999
Q ss_pred EEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcEEE
Q psy6348 157 TVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIV 236 (333)
Q Consensus 157 ~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnvi~ 236 (333)
++|+|++++|+++++++.++.||+|+++||++||+++|+++|.++|+ |+++||++|||++||.+.. +|||++||+++
T Consensus 198 ~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i~ga~lDv~~~eP~~~~--~~L~~~~nvil 274 (311)
T 2cuk_A 198 SLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTDPEPLPPG--HPLYALPNAVI 274 (311)
T ss_dssp EECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTSSEEEESSCSSSSCCTT--SGGGGCTTEEE
T ss_pred EEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcCCEEEEeeCCCCCCCCC--ChhhhCCCEEE
Confidence 99999999999999999999999999999999999999999999999 9999999999999995432 69999999999
Q ss_pred ccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCcc
Q psy6348 237 TPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVL 276 (333)
Q Consensus 237 TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~v 276 (333)
|||++++|.|++.+++..+++|+.+|..|+ ++.|.|
T Consensus 275 tPh~~~~t~~~~~~~~~~~~~nl~~~~~g~----~~~~~v 310 (311)
T 2cuk_A 275 TPHIGSAGRTTRERMAEVAVENLLAVLEGR----EPPNPV 310 (311)
T ss_dssp CCSCTTCBHHHHHHHHHHHHHHHHHHHTTC----CCSSBC
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHHHHcCC----CCCCcc
Confidence 999999999999999999999999988887 566654
No 28
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=6.8e-61 Score=464.00 Aligned_cols=276 Identities=26% Similarity=0.372 Sum_probs=253.0
Q ss_pred CceEEEEe------CCCCCCHHHhcccC--cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhc
Q psy6348 1 KYDGLVVR------SDTKVTAEVLQASN--LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSR 72 (333)
Q Consensus 1 ~~daliv~------s~~~v~~~~l~~~~--Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R 72 (333)
++|+++++ ..+++++++|+++| ||+|++.|+|+||||+++|+++||.|+|+||+|+.+||||++++||+++|
T Consensus 51 ~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R 130 (348)
T 2w2k_A 51 DFEAIIKLAVENGTESYPWNADLISHLPSSLKVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFR 130 (348)
T ss_dssp CCSEEEECSTTTTGGGCCBCHHHHTTSCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcccccccccCCCCHHHHHhcccCceEEEECCccccccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHh
Confidence 46787764 24689999999985 99999999999999999999999999999999999999999999999999
Q ss_pred CCCccchhhhcCc---ccccC----CCccccCCCEEEEEecChHHHHHHHHHh-hCCCEEEEEcCCC-CHHHHHhcCccc
Q psy6348 73 NVPQGCQSLKEGK---WDRKL----YTGTELYGKTLAVLGLGRIGREVALRMQ-AFGMKVIGFDPMV-SVEDAAKLNIAS 143 (333)
Q Consensus 73 ~i~~~~~~~~~g~---w~~~~----~~g~~l~gktvGIIGlG~IG~~vA~~l~-~~G~~V~~~d~~~-~~~~a~~~gv~~ 143 (333)
+++++++.+|+|. |.+.. ..+.++.|+|+||||+|+||+.+|++++ ++||+|++||++. ..+.+.+.|+..
T Consensus 131 ~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~ 210 (348)
T 2w2k_A 131 LASYSERAARTGDPETFNRVHLEIGKSAHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAER 210 (348)
T ss_dssp THHHHHHHHTTCCHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEE
T ss_pred ChHHHHHHHHcCCCcccccccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEE
Confidence 9999999999999 94321 3578999999999999999999999999 9999999999987 445555668777
Q ss_pred c-ChhhhccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCC
Q psy6348 144 L-GLEDIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKS 222 (333)
Q Consensus 144 ~-~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~ 222 (333)
. ++++++++||+|++|+|.+++|+++++++.++.||+|++|||++||+++|+++|.++|++|++.||++|||++||..+
T Consensus 211 ~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~ 290 (348)
T 2w2k_A 211 VDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEPQVS 290 (348)
T ss_dssp CSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTTSCC
T ss_pred eCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCCCCC
Confidence 6 899999999999999999999999999999999999999999999999999999999999999999999999998433
Q ss_pred ccchhhcCCCcEEEccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCcccccccCc
Q psy6348 223 EQTFELIKHPKVIVTPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNAPALAA 283 (333)
Q Consensus 223 ~~~~~L~~~pnvi~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~~~~~~ 283 (333)
+||+++|||++|||+|++|.|++.+++..+++|+.+|..|+ ++.|.||.+.+++
T Consensus 291 ---~~L~~~~nviltPH~~~~t~e~~~~~~~~~~~ni~~~~~g~----~~~~~v~~~~~~~ 344 (348)
T 2w2k_A 291 ---KELIEMKHVTLTTHIGGVAIETFHEFERLTMTNIDRFLLQG----KPLLTPAGKVFAP 344 (348)
T ss_dssp ---HHHHTSSSEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHTC----CCCSSBCSCCCCC
T ss_pred ---chhhcCCCEEEcCcCCCCCHHHHHHHHHHHHHHHHHHHcCC----CCcceecccccCc
Confidence 68999999999999999999999999999999999987776 7889999987654
No 29
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=3e-61 Score=463.88 Aligned_cols=274 Identities=32% Similarity=0.551 Sum_probs=255.6
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
++|++++++.+++++++|+++| ||+|++.|+|+||||+++|+++||.|+|+||+|+.+||||++++||+++|+++.+++
T Consensus 42 ~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~ 121 (333)
T 2d0i_A 42 RFDGIIVSPTTKITREVLENAERLKVISCHSAGYDNIDLEEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADK 121 (333)
T ss_dssp GCSEEEECTTSCBCHHHHTTCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHhhCCCceEEEECCcccccccHHHHHhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHH
Confidence 5799999988899999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCccccc--CCCc----cccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCC
Q psy6348 80 SLKEGKWDRK--LYTG----TELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLA 153 (333)
Q Consensus 80 ~~~~g~w~~~--~~~g----~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~a 153 (333)
.+|+|.|.+. .+.| .++.|++|||||+|.||+.+|++++++||+|++||++...+.+.+.|+...++++++++|
T Consensus 122 ~~~~g~w~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~e~l~~a 201 (333)
T 2d0i_A 122 FIRRGEWESHAKIWTGFKRIESLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKVNVEKELKARYMDIDELLEKS 201 (333)
T ss_dssp HHHTTCCCCHHHHHTTSCCCCCSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCHHHHHHHTEEECCHHHHHHHC
T ss_pred HHHcCCCCcCcccccCCcccCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCceecCHHHHHhhC
Confidence 9999999641 2346 799999999999999999999999999999999999887655566777767899999999
Q ss_pred CEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCC-
Q psy6348 154 DYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHP- 232 (333)
Q Consensus 154 DvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~p- 232 (333)
|+|++|+|.+++|+++++++.++.||+| +|||++||.++|+++|.++|++|+++||++|||++||+++ +||+++|
T Consensus 202 DiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~---~~L~~~~~ 277 (333)
T 2d0i_A 202 DIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFEKEPVRE---HELFKYEW 277 (333)
T ss_dssp SEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCSSSSCSC---CGGGGCTT
T ss_pred CEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCCCCCCCC---chHHcCCC
Confidence 9999999999999999999999999999 9999999999999999999999999999999999999653 6899999
Q ss_pred cEEEccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCcccccccC
Q psy6348 233 KVIVTPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNAPALA 282 (333)
Q Consensus 233 nvi~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~~~~~ 282 (333)
||++|||+++.|.|+..++++.+++|+.+|..|+ ++.|.||++.+.
T Consensus 278 nviltPh~~~~t~~~~~~~~~~~~~n~~~~~~g~----~~~~~v~~~~~~ 323 (333)
T 2d0i_A 278 ETVLTPHYAGLALEAQEDVGFRAVENLLKVLRGE----VPEDLVNKEVLE 323 (333)
T ss_dssp TEEECCSCTTCCHHHHHHHHHHHHHHHHHHHTTC----CCTTBSCTTHHH
T ss_pred CEEEcCccCCCcHHHHHHHHHHHHHHHHHHHcCC----CCcCccCHHHhh
Confidence 9999999999999999999999999999998887 788999976544
No 30
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=5.5e-61 Score=456.58 Aligned_cols=265 Identities=23% Similarity=0.300 Sum_probs=242.6
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
++|++++++ .+.++|+++| ||+|++.|+|+||||++++ ++||.|+|+||+|+.+||||++++||+++|+++.+++
T Consensus 31 ~~d~~i~~~---~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~ 106 (303)
T 1qp8_A 31 NVEAALVSR---ITAEELAKMPRLKFIQVVTAGLDHLPWESI-PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGE 106 (303)
T ss_dssp TBCCCCBSC---CCHHHHHHCTTCCCEEBSSSCCTTSCCTTS-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred CCEEEEECC---CCHHHHhhCCCCcEEEECCcCcccccHHHH-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHH
Confidence 578888765 4579999999 9999999999999999884 8999999999999999999999999999999999999
Q ss_pred hhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCc-cccChhhhccCCCEEEE
Q psy6348 80 SLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNI-ASLGLEDIWPLADYITV 158 (333)
Q Consensus 80 ~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv-~~~~l~ell~~aDvV~l 158 (333)
.+++|.|.+. ..+.++.|+|+||||+|+||+.+|+++++|||+|++|||+.. +. +. ...++++++++||+|++
T Consensus 107 ~~~~g~w~~~-~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~-~~----~~~~~~~l~ell~~aDvV~l 180 (303)
T 1qp8_A 107 KMKRGDYGRD-VEIPLIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK-EG----PWRFTNSLEEALREARAAVC 180 (303)
T ss_dssp HHHTTCCCCC-SCCCCCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC-CS----SSCCBSCSHHHHTTCSEEEE
T ss_pred HHHcCCCCCC-CCCCCCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc-cc----CcccCCCHHHHHhhCCEEEE
Confidence 9999999753 234589999999999999999999999999999999999775 21 33 33589999999999999
Q ss_pred ecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccC-CCCCCCCccchhhcCCCcEEEc
Q psy6348 159 HTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVF-CEEPPKSEQTFELIKHPKVIVT 237 (333)
Q Consensus 159 ~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~-~~EP~~~~~~~~L~~~pnvi~T 237 (333)
|+|++++|+++++++.|+.||+|++|||+|||+++|+++|.++|++|+++||++||| ++||.+. .+|||++||+++|
T Consensus 181 ~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~--~~~L~~~~nvilt 258 (303)
T 1qp8_A 181 ALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAK--DAEFFSLPNVVAT 258 (303)
T ss_dssp CCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGG--GHHHHTSTTEEEC
T ss_pred eCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCC--CChhhcCCCEEEC
Confidence 999999999999999999999999999999999999999999999999999999999 8899653 3799999999999
Q ss_pred cCCCCC--cHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCccccccc
Q psy6348 238 PHLGAS--TKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNAPAL 281 (333)
Q Consensus 238 PHi~~~--t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~~~~ 281 (333)
||++++ |.|++.++++.+++|+.+|..|+ ++.|.||++.+
T Consensus 259 PH~~~~~~t~e~~~~~~~~~~~nl~~~~~g~----~~~~~v~~~~y 300 (303)
T 1qp8_A 259 PWVAGGYGNERVWRQMVMEAVRNLITYATGG----RPRNIAKREDY 300 (303)
T ss_dssp CSCSSSSSCHHHHHHHHHHHHHHHHHHHTTS----CCSCBCCGGGT
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHHHcCC----CCCceeCHHHc
Confidence 999998 99999999999999999988887 78999998754
No 31
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=1.7e-60 Score=458.82 Aligned_cols=273 Identities=35% Similarity=0.557 Sum_probs=254.5
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
++|++++++.+++++++|+++| ||+|++.|+|+||||+++|+++||.|+|+||+|+.+||||++++||++.|+++.+++
T Consensus 45 ~~d~~~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~ 124 (334)
T 2dbq_A 45 EVDALVTMLSERIDKEVFENAPKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDR 124 (334)
T ss_dssp SCSEEEECTTSCBCHHHHHTCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred CcEEEEEcCCCCCCHHHHhhCCCceEEEECCcccccccHHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 5799999988899999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCccc----c---cCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccC
Q psy6348 80 SLKEGKWD----R---KLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPL 152 (333)
Q Consensus 80 ~~~~g~w~----~---~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~ 152 (333)
.+++|.|. . ..+.+.++.|++|||||+|.||+.+|++++++|++|++||++...+.+.+.|+...++++++++
T Consensus 125 ~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~~~l~~ 204 (334)
T 2dbq_A 125 FVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRE 204 (334)
T ss_dssp HHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCEECCHHHHHHH
T ss_pred HHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcchhhHhhcCcccCCHHHHHhh
Confidence 99999996 2 1234789999999999999999999999999999999999988665555667776789999999
Q ss_pred CCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCC
Q psy6348 153 ADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHP 232 (333)
Q Consensus 153 aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~p 232 (333)
||+|++|+|.+++|+++++++.++.||+|++|||++||.++++++|.++|++|+++||++|||++||+. .+||+.+|
T Consensus 205 aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP~~---~~~L~~~~ 281 (334)
T 2dbq_A 205 SDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYY---NEELFKLD 281 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCC---CHHHHHCT
T ss_pred CCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCCCCCC---CchhhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999933 37999999
Q ss_pred cEEEccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCcccccc
Q psy6348 233 KVIVTPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNAPA 280 (333)
Q Consensus 233 nvi~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~~~ 280 (333)
||++|||+|+.|.++..+++..+++|+.+|..|+ ++.|.||+..
T Consensus 282 ~vi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~----~~~~~v~~~~ 325 (334)
T 2dbq_A 282 NVVLTPHIGSASFGAREGMAELVAKNLIAFKRGE----IPPTLVNREV 325 (334)
T ss_dssp TEEECSSCTTCSHHHHHHHHHHHHHHHHHHHTTC----CCTTBSCTTH
T ss_pred CEEECCccCCCcHHHHHHHHHHHHHHHHHHHcCC----CCccccCHHH
Confidence 9999999999999999999999999999998887 7889999653
No 32
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=2.9e-59 Score=449.43 Aligned_cols=272 Identities=25% Similarity=0.457 Sum_probs=252.7
Q ss_pred CceEEEEeCCCCCCHHHhccc-C-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccc
Q psy6348 1 KYDGLVVRSDTKVTAEVLQAS-N-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGC 78 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~-~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~ 78 (333)
++|++++++.+++++++|+++ | ||+|++.|+|+||||+++|+++||.|+|+||+|+.+||||++++||++.|+++.++
T Consensus 53 ~~d~~~~~~~~~~~~~~l~~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~ 132 (330)
T 2gcg_A 53 GAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAI 132 (330)
T ss_dssp TCSEEEECTTSCBCHHHHHHHCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred CCeEEEECCCCCCCHHHHHhcCCCceEEEECCcccccccHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHH
Confidence 579999988889999999998 8 99999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCccccc---CCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCccccChhhhccCCC
Q psy6348 79 QSLKEGKWDRK---LYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASLGLEDIWPLAD 154 (333)
Q Consensus 79 ~~~~~g~w~~~---~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~~l~ell~~aD 154 (333)
+.+++|.|.+. .+.|.++.|+||||||+|.||+.+|++++++|++|++||++. ..+...+.|+...++++++++||
T Consensus 133 ~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aD 212 (330)
T 2gcg_A 133 EEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSD 212 (330)
T ss_dssp HHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEECCHHHHHHHCS
T ss_pred HHHHcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeCCHHHHHhhCC
Confidence 99999999642 245789999999999999999999999999999999999876 34555666776668999999999
Q ss_pred EEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcE
Q psy6348 155 YITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKV 234 (333)
Q Consensus 155 vV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnv 234 (333)
+|++|+|.+++|+++++++.++.||+|++|||++||+++|+++|.++|++|++.||++|||++||.+. .+||+++|||
T Consensus 213 vVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~--~~~l~~~~nv 290 (330)
T 2gcg_A 213 FIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPT--NHPLLTLKNC 290 (330)
T ss_dssp EEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCT--TCGGGGCTTE
T ss_pred EEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCC--CChhhcCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999543 2699999999
Q ss_pred EEccCCCCCcHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCcccc
Q psy6348 235 IVTPHLGASTKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNA 278 (333)
Q Consensus 235 i~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~ 278 (333)
++|||+|+.|.++..+++..+++|+.++..|+ ++.|.||.
T Consensus 291 i~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~----~~~~~v~~ 330 (330)
T 2gcg_A 291 VILPHIGSATHRTRNTMSLLAANNLLAGLRGE----PMPSELKL 330 (330)
T ss_dssp EECCSCTTCBHHHHHHHHHHHHHHHHHHHHTC----CCTTEECC
T ss_pred EECCCCCCCcHHHHHHHHHHHHHHHHHHHcCC----CCCCCCCC
Confidence 99999999999999999999999999988887 77888873
No 33
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=5.6e-59 Score=453.72 Aligned_cols=241 Identities=30% Similarity=0.447 Sum_probs=223.0
Q ss_pred CceEEEEeCCCCCCHHHhcccCcceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchh
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASNLQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQS 80 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~ 80 (333)
++|++++++.+++++++|+..+||+|+++|+|+||||+++|+++||.|+|+||+|+.+||||+++++|+++|+.
T Consensus 40 ~ad~li~~~~~~v~~~ll~~~~Lk~I~~~~~G~D~iD~~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~------ 113 (381)
T 3oet_A 40 HADALMVRSVTKVNESLLSGTPINFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERD------ 113 (381)
T ss_dssp TCSEEEECTTSCBSHHHHTTSCCCEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHT------
T ss_pred CCEEEEECCCCCCCHHHHcCCCCEEEEEccccccccCHHHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHhc------
Confidence 58999999999999999994449999999999999999999999999999999999999999999999999852
Q ss_pred hhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEec
Q psy6348 81 LKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVHT 160 (333)
Q Consensus 81 ~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~~ 160 (333)
|.+++|||+||||+|+||+.+|+++++|||+|++|||+.. ....+....++++++++||+|++|+
T Consensus 114 ------------g~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~---~~~~~~~~~sl~ell~~aDiV~l~~ 178 (381)
T 3oet_A 114 ------------GFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRA---ARGDEGDFRTLDELVQEADVLTFHT 178 (381)
T ss_dssp ------------TCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHH---HTTCCSCBCCHHHHHHHCSEEEECC
T ss_pred ------------CCccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCChH---HhccCcccCCHHHHHhhCCEEEEcC
Confidence 4689999999999999999999999999999999998431 1123455679999999999999999
Q ss_pred CCchh----hHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcEEE
Q psy6348 161 PLIPQ----TKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIV 236 (333)
Q Consensus 161 P~t~~----t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnvi~ 236 (333)
|++++ |+++++++.|+.||+|++|||+|||+++|+++|+++|++|+++||+||||++||+++ ++|+.++ +++
T Consensus 179 Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP~~~---~~L~~~~-~i~ 254 (381)
T 3oet_A 179 PLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPDLN---VALLEAV-DIG 254 (381)
T ss_dssp CCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCC---HHHHHHS-SEE
T ss_pred cCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCCCCc---chhhhCC-EEE
Confidence 99999 999999999999999999999999999999999999999999999999999999764 4688765 899
Q ss_pred ccCCCCCcHHHHHHHHHHHHHHHHHhHcCC
Q psy6348 237 TPHLGASTKEAQIRVAVEIAEQFIALANTN 266 (333)
Q Consensus 237 TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~ 266 (333)
|||+||+|.|++.++..++++|+.+|.++.
T Consensus 255 TPHiag~t~e~~~~~~~~~~~~l~~~l~~~ 284 (381)
T 3oet_A 255 TSHIAGYTLEGKARGTTQVFEAYSAFIGRE 284 (381)
T ss_dssp CSSCTTCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCccCcCcHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999998885
No 34
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=2.9e-59 Score=441.97 Aligned_cols=247 Identities=26% Similarity=0.390 Sum_probs=224.1
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
++|++|+ +.+++ ++| ||+|++.|+|+||||+++|+++||.+.| ++.|+.+||||++++||++.|+++.+++
T Consensus 34 ~ad~li~-~~~~~------~~~~Lk~I~~~~~G~d~id~~~~~~~~~~~~~-~~~~~~~vAE~~~~~~L~~~R~~~~~~~ 105 (290)
T 3gvx_A 34 DAEAQVI-KDRYV------LGKRTKMIQAISAGVDHIDVNGIPENVVLCSN-AGAYSISVAEHAFALLLAHAKNILENNE 105 (290)
T ss_dssp CCSEEEE-SSCCC------CCSSCCEEEECSSCCTTSCGGGSCTTSEEECC-HHHHHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred hhhhhhh-hhhhh------hhhhhHHHHHHhcCCceeecCCCccceEEeec-CCcceeeHHHHHHHHHHHHHHhhhhhhh
Confidence 5899998 34443 678 9999999999999999999887665555 5889999999999999999999999999
Q ss_pred hhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcccc-ChhhhccCCCEEEE
Q psy6348 80 SLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASL-GLEDIWPLADYITV 158 (333)
Q Consensus 80 ~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~-~l~ell~~aDvV~l 158 (333)
.+++|+|.+.. ..++.|||+||||+|+||+++|+++++|||+|++|||+..... .+... ++++++++||+|++
T Consensus 106 ~~~~g~w~~~~--~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~----~~~~~~~l~ell~~aDiV~l 179 (290)
T 3gvx_A 106 LMKAGIFRQSP--TTLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQN----VDVISESPADLFRQSDFVLI 179 (290)
T ss_dssp HHHTTCCCCCC--CCCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTT----CSEECSSHHHHHHHCSEEEE
T ss_pred HhhhcccccCC--ceeeecchheeeccCchhHHHHHHHHhhCcEEEEEeccccccc----cccccCChHHHhhccCeEEE
Confidence 99999998653 3789999999999999999999999999999999999764321 13344 89999999999999
Q ss_pred ecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcEEEcc
Q psy6348 159 HTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTP 238 (333)
Q Consensus 159 ~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnvi~TP 238 (333)
|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|++.||++|||++||. +|||++|||++||
T Consensus 180 ~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~-----~pL~~~~nvilTP 254 (290)
T 3gvx_A 180 AIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPE-----ITETNLRNAILSP 254 (290)
T ss_dssp CCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTS-----CCSCCCSSEEECC
T ss_pred EeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcc-----cchhhhhhhhcCc
Confidence 99999999999999999999999999999999999999999999999999999999999996 4899999999999
Q ss_pred CCC-CCcHHHHHHHHHHHHHHHHHhHcCC
Q psy6348 239 HLG-ASTKEAQIRVAVEIAEQFIALANTN 266 (333)
Q Consensus 239 Hi~-~~t~ea~~~~~~~~~~~i~~~~~~~ 266 (333)
|+| ++|.|+..++.+.+++|+.+|..|+
T Consensus 255 Hiag~~t~e~~~~~~~~~~~ni~~~~~~~ 283 (290)
T 3gvx_A 255 HVAGGMSGEIMDIAIQLAFENVRNFFEGE 283 (290)
T ss_dssp SCSSCBTTBCCHHHHHHHHHHHHHHTC--
T ss_pred cccCCccchHHHHHHHHHHHHHHhhhcCC
Confidence 999 9999999999999999999988875
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.4e-56 Score=437.42 Aligned_cols=240 Identities=30% Similarity=0.431 Sum_probs=223.5
Q ss_pred CceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccch
Q psy6348 1 KYDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQ 79 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~ 79 (333)
++|++++++.+++++++|+ +| ||+|+++|+|+||||+++|+++||.|+|+||+|+.+||||++++||++.|+
T Consensus 37 ~ad~li~~~~~~~~~~~l~-~~~Lk~I~~~~~G~D~iD~~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~------ 109 (380)
T 2o4c_A 37 EVDVLLVRSVTEVSRAALA-GSPVRFVGTCTIGTDHLDLDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEV------ 109 (380)
T ss_dssp TCSEEEECTTSCBCHHHHT-TSCCCEEEECSSCSTTBCHHHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHH------
T ss_pred CcEEEEEcCCCCCCHHHhc-CCCceEEEEcCcccchhhHHHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhh------
Confidence 5899999998999999999 78 999999999999999999999999999999999999999999999999986
Q ss_pred hhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEe
Q psy6348 80 SLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVH 159 (333)
Q Consensus 80 ~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~ 159 (333)
| +.++.|+||||||+|+||+.+|++|++|||+|++|||+... ...+....++++++++||+|++|
T Consensus 110 ------~------~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~---~~~g~~~~~l~ell~~aDvV~l~ 174 (380)
T 2o4c_A 110 ------R------GADLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQA---REPDGEFVSLERLLAEADVISLH 174 (380)
T ss_dssp ------H------TCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHH---HSTTSCCCCHHHHHHHCSEEEEC
T ss_pred ------h------hcccCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhh---hccCcccCCHHHHHHhCCEEEEe
Confidence 2 35899999999999999999999999999999999985421 13455567899999999999999
Q ss_pred cCCchh----hHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcEE
Q psy6348 160 TPLIPQ----TKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKVI 235 (333)
Q Consensus 160 ~P~t~~----t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnvi 235 (333)
+|++++ |+++++++.|+.||+|++|||+|||+++|+++|+++|++|++.||+||||++||+++ ++|+. +||+
T Consensus 175 ~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~~---~~l~~-~nvi 250 (380)
T 2o4c_A 175 TPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQAD---PELAA-RCLI 250 (380)
T ss_dssp CCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCC---HHHHT-TCSE
T ss_pred ccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCCCc---hhhcc-CCEE
Confidence 999999 999999999999999999999999999999999999999999999999999999654 57777 5999
Q ss_pred EccCCCCCcHHHHHHHHHHHHHHHHHhHcCC
Q psy6348 236 VTPHLGASTKEAQIRVAVEIAEQFIALANTN 266 (333)
Q Consensus 236 ~TPHi~~~t~ea~~~~~~~~~~~i~~~~~~~ 266 (333)
+|||+|++|.|+..++...+++|+.++.+|+
T Consensus 251 ~TPHiag~t~e~~~~~~~~~~~nl~~~l~g~ 281 (380)
T 2o4c_A 251 ATPHIAGYSLEGKLRGTAQIYQAYCAWRGIA 281 (380)
T ss_dssp ECSSCTTCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred EccccCcCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999998886
No 36
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=100.00 E-value=5.8e-40 Score=329.01 Aligned_cols=234 Identities=17% Similarity=0.134 Sum_probs=198.2
Q ss_pred CCHHHhcccCcceEE-EcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCC
Q psy6348 13 VTAEVLQASNLQVVG-RAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLY 91 (333)
Q Consensus 13 v~~~~l~~~~Lk~I~-~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~ 91 (333)
+..+++ .++|.|+ .+++|+|++ ++|+++||.|+|+|++|. +|||+. +|++....+.++.| |.+ +
T Consensus 206 ~~~~l~--~~l~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~vn~-sVae~l-------~r~~~~~~~~l~~g-w~~--~ 270 (494)
T 3d64_A 206 WYSKRL--AHIKGVTEETTTGVHRL--YQMEKDGRLPFPAFNVND-SVTKSK-------FDNLYGCRESLVDG-IKR--A 270 (494)
T ss_dssp TTHHHH--TTCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHHH-------HHHHHHHHTTHHHH-HHH--H
T ss_pred hHHHHh--hCcEEEEEEcccCHhhH--HHHHHCCCEEEECCCccH-HHHHHH-------HhhhHhhhhhhhhh-hhh--c
Confidence 344554 2388888 789999998 789999999999999999 999953 46666666677777 864 4
Q ss_pred CccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHH-HHHhcCccccChhhhccCCCEEEEecCCchhhHhhc
Q psy6348 92 TGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVE-DAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLI 170 (333)
Q Consensus 92 ~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li 170 (333)
.+.++.|||+||||+|.||+.+|+++++|||+|++||++.... .+...|++..++++++++||+|++|+ .|+++|
T Consensus 271 ~g~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~----~t~~lI 346 (494)
T 3d64_A 271 TDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTAT----GNYHVI 346 (494)
T ss_dssp HCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECS----SSSCSB
T ss_pred cccccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECC----Cccccc
Confidence 5789999999999999999999999999999999999976432 34556887789999999999999997 688999
Q ss_pred cHHHHhccCCCcEEEEccCCcc-cchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCC--CcEEEccCCC-CCcHH
Q psy6348 171 NAEVLKKCKKGVRVVNVARGGI-VDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKH--PKVIVTPHLG-ASTKE 246 (333)
Q Consensus 171 ~~~~~~~mk~gailIN~aRg~~-vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~--pnvi~TPHi~-~~t~e 246 (333)
+++.|+.||+|++|||++||++ ||+++| +||++|+|+ +++|+| |.++ .+||+.+ |||++| |+| +++.+
T Consensus 347 ~~~~l~~MK~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv~---plp~--~~pL~~l~~~nvv~t-H~atg~~~~ 418 (494)
T 3d64_A 347 NHDHMKAMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDHI---IFPD--GKRVILLAEGRLVNL-GCATGHPSF 418 (494)
T ss_dssp CHHHHHHCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEEE---ECTT--SCEEEEEGGGSBHHH-HTSCCSCHH
T ss_pred CHHHHhhCCCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEEE---ECCC--CCchhhcCCCCEEEE-eCcCCCCHH
Confidence 9999999999999999999999 699999 999999997 555554 5432 2588888 999999 999 66744
Q ss_pred -HHHHHHHHHHHHHHHhHcCCCCCCCCCCccc
Q psy6348 247 -AQIRVAVEIAEQFIALANTNPQYTSIQGVLN 277 (333)
Q Consensus 247 -a~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn 277 (333)
.+.+++..+++|+..|..|+ +++|.|+
T Consensus 419 ~~~~~~a~~~~~ni~~~~~g~----~~~n~V~ 446 (494)
T 3d64_A 419 VMSNSFTNQTLAQIELFTRGG----EYANKVY 446 (494)
T ss_dssp HHHHHHHHHHHHHHHHHHHGG----GSCSSEE
T ss_pred HHHHHHHHHHHHHHHHHHcCC----CCCCcee
Confidence 78899999999999988877 7888886
No 37
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=100.00 E-value=1.6e-37 Score=310.35 Aligned_cols=220 Identities=19% Similarity=0.187 Sum_probs=195.1
Q ss_pred cceEE-EcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEE
Q psy6348 23 LQVVG-RAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTL 101 (333)
Q Consensus 23 Lk~I~-~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktv 101 (333)
++.|. .+++|+|++ ++|+++||.|+|+|++|. +++| +++|++....+.+++| |.+ +.+.++.||++
T Consensus 194 l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~l~~g-w~r--~~~~~l~GktV 260 (479)
T 1v8b_A 194 IIGVSEETTTGVLRL--KKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHSLPDG-LMR--ATDFLISGKIV 260 (479)
T ss_dssp CCEEEECSHHHHHHH--HHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHHHHHH-HHH--HHCCCCTTSEE
T ss_pred eEEEEEeeCccHhHH--HHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHHHhhh-hhh--ccccccCCCEE
Confidence 88888 789999998 789999999999999999 9999 4568888888888888 965 45779999999
Q ss_pred EEEecChHHHHHHHHHhhCCCEEEEEcCCCCHH-HHHhcCccccChhhhccCCCEEEEecCCchhhHhhccHHHHhccCC
Q psy6348 102 AVLGLGRIGREVALRMQAFGMKVIGFDPMVSVE-DAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINAEVLKKCKK 180 (333)
Q Consensus 102 GIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~ 180 (333)
||||+|.||+.+|+++++|||+|++||++.... .+...|++..++++++++||+|++|+ .|+++|+++.|+.||+
T Consensus 261 gIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~----~t~~lI~~~~l~~MK~ 336 (479)
T 1v8b_A 261 VICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCT----GNVDVIKLEHLLKMKN 336 (479)
T ss_dssp EEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECC----SSSSSBCHHHHTTCCT
T ss_pred EEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECC----ChhhhcCHHHHhhcCC
Confidence 999999999999999999999999999987442 45567887789999999999999995 7899999999999999
Q ss_pred CcEEEEccCCcc-cchHhHHh--hhhcCCceEEEeccCCCCCCCCccchhhcCC--CcEEEccCCC-CCcHH-HHHHHHH
Q psy6348 181 GVRVVNVARGGI-VDENALLD--SLKCGHCGGAALDVFCEEPPKSEQTFELIKH--PKVIVTPHLG-ASTKE-AQIRVAV 253 (333)
Q Consensus 181 gailIN~aRg~~-vd~~aL~~--aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~--pnvi~TPHi~-~~t~e-a~~~~~~ 253 (333)
|++|||++||++ ||+++|.+ +|++|+|+ +++|||+.++ . +||+.+ ||+++| |+| +++.+ .+.+++.
T Consensus 337 gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~plp~--~---~~l~~l~~~nvv~t-H~atghp~e~~~~s~a~ 409 (479)
T 1v8b_A 337 NAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRITLPN--G---NKIIVLARGRLLNL-GCATGHPAFVMSFSFCN 409 (479)
T ss_dssp TCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEEECTT--S---CEEEEEGGGSBHHH-HSSCCSCHHHHHHHHHH
T ss_pred CcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEEECCC--C---CeeeEecCCCEEEE-eccCCCCchhHHHHHHH
Confidence 999999999999 99999999 99999998 9999984422 2 578777 999999 999 67766 7889999
Q ss_pred HHHHHHHHhHcCC
Q psy6348 254 EIAEQFIALANTN 266 (333)
Q Consensus 254 ~~~~~i~~~~~~~ 266 (333)
.+++|+..|.+|+
T Consensus 410 ~~~~ni~~~~~g~ 422 (479)
T 1v8b_A 410 QTFAQLDLWQNKD 422 (479)
T ss_dssp HHHHHHHHHHTTT
T ss_pred HHHHHHHHHHcCC
Confidence 9999999988774
No 38
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.96 E-value=1.3e-28 Score=231.98 Aligned_cols=163 Identities=22% Similarity=0.226 Sum_probs=142.5
Q ss_pred CceEEEEe----------------CCCCCCHHHhcccC-cceEEEcccCcCccCh-hhHhhCCcEEEECC------CCCc
Q psy6348 1 KYDGLVVR----------------SDTKVTAEVLQASN-LQVVGRAGTGVDNIDL-TAATRKGVLVLNAP------GGNF 56 (333)
Q Consensus 1 ~~daliv~----------------s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~-~aa~~~gI~V~n~p------~~n~ 56 (333)
++|+++++ +.+++++++|+.+| ||+|+ +|+||+|+ ++|+++||.|+|+| ++|+
T Consensus 58 ~~d~ii~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~l~~i~---~G~d~id~~~~~~~~gi~v~~~~~~~~~~~~~~ 134 (293)
T 3d4o_A 58 TVDAILLPISGTNEAGKVDTIFSNESIVLTEEMIEKTPNHCVVY---SGISNTYLNQCMKKTNRTLVKLMERDDIAIYNS 134 (293)
T ss_dssp GCSEEECCTTCCCTTCBCCBSSCSCCCBCCHHHHHTSCTTCEEE---ESSCCHHHHHHHHHHTCEEEEGGGCHHHHHHHH
T ss_pred cCCEEEeccccccCCceeecccccCCccchHHHHHhCCCCCEEE---ecCCCHHHHHHHHHcCCeEEEecCCceeeeecc
Confidence 47888875 45678999999999 99997 89999998 89999999999998 8899
Q ss_pred hHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HH
Q psy6348 57 ISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-ED 135 (333)
Q Consensus 57 ~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~ 135 (333)
.++||++++++|.. .+.++.|+++||||+|.||+.+|++++++|++|++|||+... +.
T Consensus 135 ~svae~a~~~~l~~---------------------~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~ 193 (293)
T 3d4o_A 135 IPTAEGTIMMAIQH---------------------TDFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLAR 193 (293)
T ss_dssp HHHHHHHHHHHHHH---------------------CSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred HhHHHHHHHHHHHh---------------------cCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 99999999999863 246799999999999999999999999999999999997633 33
Q ss_pred HHhcCccc---cChhhhccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcc
Q psy6348 136 AAKLNIAS---LGLEDIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGI 192 (333)
Q Consensus 136 a~~~gv~~---~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~ 192 (333)
+.+.|+.. .++++++++||+|++|+|. ++++++.++.||+|+++||++||..
T Consensus 194 ~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-----~~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 194 IAEMGMEPFHISKAAQELRDVDVCINTIPA-----LVVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp HHHTTSEEEEGGGHHHHTTTCSEEEECCSS-----CCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred HHHCCCeecChhhHHHHhcCCCEEEECCCh-----HHhCHHHHHhcCCCCEEEEecCCCC
Confidence 45567654 3688999999999999995 7889999999999999999999754
No 39
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.94 E-value=7.1e-29 Score=249.21 Aligned_cols=225 Identities=19% Similarity=0.146 Sum_probs=181.6
Q ss_pred eEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEE
Q psy6348 25 VVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVL 104 (333)
Q Consensus 25 ~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGII 104 (333)
++-.+|+|+|++ .++.++||.++|+++.|. ++||+. +|++......+..+ |.+ ..+..+.|++|+|+
T Consensus 214 vveetgtGVd~l--~a~~~~Gilv~~~~~vn~-sVae~~-------~r~l~~~~~s~~~g-~~r--~~~~~l~GktV~Ii 280 (494)
T 3ce6_A 214 VTEETTTGVLRL--YQFAAAGDLAFPAINVND-SVTKSK-------FDNKYGTRHSLIDG-INR--GTDALIGGKKVLIC 280 (494)
T ss_dssp EEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHHT-------THHHHHHHHHHHHH-HHH--HHCCCCTTCEEEEE
T ss_pred EEEEeCCChhHH--HHHHHcCCEEEecCCccH-HHHHHH-------HhhhhhhhhhhhHH-HHh--ccCCCCCcCEEEEE
Confidence 445789999998 778999999999999999 999953 34444444444433 543 23457899999999
Q ss_pred ecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhcCccccChhhhccCCCEEEEecCCchhhHhhccHHHHhccCCCcE
Q psy6348 105 GLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVR 183 (333)
Q Consensus 105 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gai 183 (333)
|+|.||+.+|++++++|++|++||++... +.+.+.|+...+++++++++|+|+.|++ +.++++.+.++.||+|++
T Consensus 281 G~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~atg----t~~~i~~~~l~~mk~ggi 356 (494)
T 3ce6_A 281 GYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATG----NKDIIMLEHIKAMKDHAI 356 (494)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECSS----SSCSBCHHHHHHSCTTCE
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECCC----CHHHHHHHHHHhcCCCcE
Confidence 99999999999999999999999997633 5567788877789999999999999975 456888899999999999
Q ss_pred EEEccCCcc-cchHhHHh-hhhcCCceEEEeccCCCCCCCCccchhhcCCCcEE----EccCCCCCcHHHHHHHHHHHHH
Q psy6348 184 VVNVARGGI-VDENALLD-SLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKVI----VTPHLGASTKEAQIRVAVEIAE 257 (333)
Q Consensus 184 lIN~aRg~~-vd~~aL~~-aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnvi----~TPHi~~~t~ea~~~~~~~~~~ 257 (333)
++|++|++. +|.++|.+ +|+++++. +++|+|+.+|...+ ..|+..+|++ +|||+++.+.++. ..++.+
T Consensus 357 lvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~~~~--l~LL~~grlvnL~~~TPH~a~~~~~s~---~~qa~~ 430 (494)
T 3ce6_A 357 LGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDTGRS--IIVLSEGRLLNLGNATGHPSFVMSNSF---ANQTIA 430 (494)
T ss_dssp EEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTTCCE--EEEEGGGSCHHHHHSCCSCHHHHHHHH---HHHHHH
T ss_pred EEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCcchH--HHHHhCCCEEeccCCCCCccccchHHH---HHHHHH
Confidence 999999999 99999998 89889987 67899876331222 2477788998 9999998887763 778899
Q ss_pred HHHHhHcCCCCCCCCCCcc
Q psy6348 258 QFIALANTNPQYTSIQGVL 276 (333)
Q Consensus 258 ~i~~~~~~~~~~~~~~~~v 276 (333)
++..+..|+ .+.+.|
T Consensus 431 ai~~~~~g~----~~~~~V 445 (494)
T 3ce6_A 431 QIELWTKND----EYDNEV 445 (494)
T ss_dssp HHHHHHTGG----GCCSSE
T ss_pred HHHHHHcCC----CCCCEE
Confidence 999988876 555555
No 40
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.93 E-value=3.1e-26 Score=216.33 Aligned_cols=168 Identities=18% Similarity=0.218 Sum_probs=136.7
Q ss_pred CceEEEE----eC----------CCC--CCHHHhcccC-cceEEEcccCcCccC-hhhHhhCCcEEEECCCCCchHHHHH
Q psy6348 1 KYDGLVV----RS----------DTK--VTAEVLQASN-LQVVGRAGTGVDNID-LTAATRKGVLVLNAPGGNFISACEL 62 (333)
Q Consensus 1 ~~daliv----~s----------~~~--v~~~~l~~~~-Lk~I~~~g~G~d~iD-~~aa~~~gI~V~n~p~~n~~avAE~ 62 (333)
++|++++ .. .++ +++++++.+| +|+|+ +|+||+| +++|+++||.|+|+|+.+ ++
T Consensus 60 ~~d~ii~~~~~~~~~~~i~s~~a~~~~~~~~~~l~~~~~l~~i~---~g~~~~d~~~~~~~~gi~v~~~~~~~--~v--- 131 (300)
T 2rir_A 60 QIDSIILPVSATTGEGVVSTVFSNEEVVLKQDHLDRTPAHCVIF---SGISNAYLENIAAQAKRKLVKLFERD--DI--- 131 (300)
T ss_dssp GCSEEECCSSCEETTTEECBSSCSSCEECCHHHHHTSCTTCEEE---ESSCCHHHHHHHHHTTCCEEEGGGSH--HH---
T ss_pred cCCEEEeccccccCCcccccccccCCccchHHHHhhcCCCCEEE---EecCCHHHHHHHHHCCCEEEeecCCC--ce---
Confidence 4788887 21 456 8999999999 99998 8999999 999999999999999975 22
Q ss_pred HHHHHHHHhcCCCccchhhhcCccccc-CCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhcC
Q psy6348 63 TCSLISALSRNVPQGCQSLKEGKWDRK-LYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKLN 140 (333)
Q Consensus 63 ~l~l~l~~~R~i~~~~~~~~~g~w~~~-~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g 140 (333)
++.|+++.+ +|.|... .+.+.++.|+|+||||+|.||+.+|++++++|++|++|||+... +...+.|
T Consensus 132 ------~~~r~~~~~-----~g~~~~~~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g 200 (300)
T 2rir_A 132 ------AIYNSIPTV-----EGTIMLAIQHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMG 200 (300)
T ss_dssp ------HHHHHHHHH-----HHHHHHHHHTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT
T ss_pred ------EEEcCccHH-----HHHHHHHHHhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCC
Confidence 234544333 4667532 23578999999999999999999999999999999999997632 2234456
Q ss_pred ccc---cChhhhccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcc
Q psy6348 141 IAS---LGLEDIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGI 192 (333)
Q Consensus 141 v~~---~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~ 192 (333)
++. .++++++++||+|++|+|. ++++++.++.||+|+++||++||..
T Consensus 201 ~~~~~~~~l~~~l~~aDvVi~~~p~-----~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 201 LVPFHTDELKEHVKDIDICINTIPS-----MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp CEEEEGGGHHHHSTTCSEEEECCSS-----CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred CeEEchhhHHHHhhCCCEEEECCCh-----hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 643 4789999999999999996 6889999999999999999999854
No 41
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.91 E-value=7.5e-24 Score=206.52 Aligned_cols=214 Identities=15% Similarity=0.139 Sum_probs=163.4
Q ss_pred ceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEE----------ECCCCCchHHHHHHHHHHHHH
Q psy6348 2 YDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVL----------NAPGGNFISACELTCSLISAL 70 (333)
Q Consensus 2 ~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~----------n~p~~n~~avAE~~l~l~l~~ 70 (333)
+|.| +....++++|+....+ ..++.....++|...++++.++||.++ |.|..+ +.||++..+.+.+
T Consensus 68 adii-~~vk~p~~~e~~~l~~~~~l~~~~~~~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~s--~~ae~ag~~a~~~ 144 (377)
T 2vhw_A 68 ADLL-LKVKEPIAAEYGRLRHGQILFTFLHLAASRACTDALLDSGTTSIAYETVQTADGALPLLA--PMSEVAGRLAAQV 144 (377)
T ss_dssp CSEE-ECSSCCCGGGGGGCCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTH--HHHHHHHHHHHHH
T ss_pred CCEE-EEeCCCChHHHhhcCCCCEEEEEecccCCHHHHHHHHHcCCeEEEeeeccccCCCccccC--chHHHHHHHHHHH
Confidence 6754 6667788888887777 999999889999999999999999998 566654 5569998554444
Q ss_pred h-cCCCccchhhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHh-cCcc-----
Q psy6348 71 S-RNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAK-LNIA----- 142 (333)
Q Consensus 71 ~-R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-~gv~----- 142 (333)
. |++.. .+.|+|.... ...++.|++++|+|+|.||+.+|+.++++|++|++||++... +.+++ .|..
T Consensus 145 a~r~l~~----~~~g~~~~~~-~~~~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~ 219 (377)
T 2vhw_A 145 GAYHLMR----TQGGRGVLMG-GVPGVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRY 219 (377)
T ss_dssp HHHHTSG----GGTSCCCCTT-CBTTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEE
T ss_pred HHHHHHH----hcCCCccccc-CCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEecc
Confidence 3 77743 3334432111 124789999999999999999999999999999999997633 33333 4543
Q ss_pred --ccChhhhccCCCEEEEec--CCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCC-
Q psy6348 143 --SLGLEDIWPLADYITVHT--PLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCE- 217 (333)
Q Consensus 143 --~~~l~ell~~aDvV~l~~--P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~- 217 (333)
..+++++++++|+|+.++ |.+ ++.+++.++.++.||+|++|||++.. .|. ||+.
T Consensus 220 ~~~~~l~~~l~~aDvVi~~~~~p~~-~t~~li~~~~l~~mk~g~~iV~va~~-------------~Gg-------v~e~~ 278 (377)
T 2vhw_A 220 SSAYELEGAVKRADLVIGAVLVPGA-KAPKLVSNSLVAHMKPGAVLVDIAID-------------QGG-------CFEGS 278 (377)
T ss_dssp CCHHHHHHHHHHCSEEEECCCCTTS-CCCCCBCHHHHTTSCTTCEEEEGGGG-------------TTC-------SBTTC
T ss_pred CCHHHHHHHHcCCCEEEECCCcCCC-CCcceecHHHHhcCCCCcEEEEEecC-------------CCC-------ccccc
Confidence 235778889999999976 554 68899999999999999999999821 121 6877
Q ss_pred CCCCCccchhhcCCCcEE--EccCCCCCcHH
Q psy6348 218 EPPKSEQTFELIKHPKVI--VTPHLGASTKE 246 (333)
Q Consensus 218 EP~~~~~~~~L~~~pnvi--~TPHi~~~t~e 246 (333)
||.+.+ +|++..+||+ +|||+++.+..
T Consensus 279 ep~~~~--~~~~~~~~v~i~~~phl~~~~~~ 307 (377)
T 2vhw_A 279 RPTTYD--HPTFAVHDTLFYCVANMPASVPK 307 (377)
T ss_dssp CCBCSS--SCEEEETTEEEECBTTGGGGSHH
T ss_pred cCCCCC--CCEEEECCEEEEecCCcchhhHH
Confidence 875432 5889999998 99999998876
No 42
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.83 E-value=1.8e-21 Score=192.00 Aligned_cols=155 Identities=23% Similarity=0.347 Sum_probs=123.0
Q ss_pred ccc-cCCCEEEEEecChHHHHHHHHHhh-CCCEEEEE-cCCCCHHHHHhcCccccChhhhccCCCE-EEEecCCchhhHh
Q psy6348 93 GTE-LYGKTLAVLGLGRIGREVALRMQA-FGMKVIGF-DPMVSVEDAAKLNIASLGLEDIWPLADY-ITVHTPLIPQTKN 168 (333)
Q Consensus 93 g~~-l~gktvGIIGlG~IG~~vA~~l~~-~G~~V~~~-d~~~~~~~a~~~gv~~~~l~ell~~aDv-V~l~~P~t~~t~~ 168 (333)
|.+ |+|||+||+|+|+||+.+|+++++ |||+|++| |++.. ..+...++++++++.+|. .++ +|+ ++|++
T Consensus 206 G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~-----~~~~~gvdl~~L~~~~d~~~~l-~~l-~~t~~ 278 (419)
T 1gtm_A 206 GWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGG-----IYNPDGLNADEVLKWKNEHGSV-KDF-PGATN 278 (419)
T ss_dssp TCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCE-----EEEEEEECHHHHHHHHHHHSSS-TTC-TTSEE
T ss_pred CCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCcc-----ccCccCCCHHHHHHHHHhcCEe-ecC-ccCee
Confidence 567 999999999999999999999999 99999999 55421 111122356666664443 222 566 57888
Q ss_pred hccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcEEEccCC----C---
Q psy6348 169 LINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHL----G--- 241 (333)
Q Consensus 169 li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnvi~TPHi----~--- 241 (333)
++.+.|..||+ .+|||++||.+||+++ +++|+++.|.+++ +||.+. ..++|+.++||++|||+ |
T Consensus 279 -i~~~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~-~a~~ll~~~~V~itPhiaaNaGGvt 349 (419)
T 1gtm_A 279 -ITNEELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTP-EADEILFEKGILQIPDFLCNAGGVT 349 (419)
T ss_dssp -ECHHHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCH-HHHHHHHHTTCEEECHHHHTTHHHH
T ss_pred -eCHHHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCc-chHHHHhcCCEEEECchhhhCCcce
Confidence 88889999998 5999999999999999 6999999999887 888652 23689999999999999 6
Q ss_pred --------------CCcHHHHHHHHHHHHHHHHHhH
Q psy6348 242 --------------ASTKEAQIRVAVEIAEQFIALA 263 (333)
Q Consensus 242 --------------~~t~ea~~~~~~~~~~~i~~~~ 263 (333)
+++.|...++...+.+++.++.
T Consensus 350 ~s~~E~~qn~~~~~w~~~ev~~~l~~~m~~~~~~~~ 385 (419)
T 1gtm_A 350 VSYFEWVQNITGYYWTIEEVRERLDKKMTKAFYDVY 385 (419)
T ss_dssp HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeehhhhcccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 6678888888887777777743
No 43
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.79 E-value=1.9e-19 Score=174.75 Aligned_cols=245 Identities=16% Similarity=0.115 Sum_probs=159.5
Q ss_pred CceEEEEeCCCCCCHHHhccc-C-cceEEEcccCcCccChhhHhhCCcEEE---ECCCC-Cc----hHHHHHHH--HHHH
Q psy6348 1 KYDGLVVRSDTKVTAEVLQAS-N-LQVVGRAGTGVDNIDLTAATRKGVLVL---NAPGG-NF----ISACELTC--SLIS 68 (333)
Q Consensus 1 ~~daliv~s~~~v~~~~l~~~-~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~---n~p~~-n~----~avAE~~l--~l~l 68 (333)
++|.|+ ....++.++ ++.. + +++++....+.|..+++++.++||.++ +.+.. .. .+++|.+- +.++
T Consensus 65 ~ad~il-~vk~p~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~av~~ 142 (369)
T 2eez_A 65 GAEMVV-KVKEPLPEE-YGFLREGLILFTYLHLAADRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMAPQV 142 (369)
T ss_dssp TSSEEE-CSSCCCGGG-GGGCCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHHHHH
T ss_pred cCCEEE-EECCCCHHH-HhhcCCCcEEEEEecccCCHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHHHHH
Confidence 467654 656666555 5664 5 999999999999999999999999998 44432 12 34454443 4444
Q ss_pred HHhcCCCccchhhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHh-cCcc----
Q psy6348 69 ALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAK-LNIA---- 142 (333)
Q Consensus 69 ~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-~gv~---- 142 (333)
++. .+..... ..+.|.. ...++.+++++|+|.|.||+.+|+.++++|++|+++|++... +.+.+ .|..
T Consensus 143 a~~-~l~~~~~--g~~~~~~---~~~~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~ 216 (369)
T 2eez_A 143 GAQ-FLEKPKG--GRGVLLG---GVPGVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITL 216 (369)
T ss_dssp HHH-HTSGGGT--SCCCCTT---CBTBBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEE
T ss_pred HHH-HHHHhcC--CCceecC---CCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEe
Confidence 433 3433321 1122321 124789999999999999999999999999999999997532 23333 4442
Q ss_pred ---ccChhhhccCCCEEEEecCCch-hhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCC
Q psy6348 143 ---SLGLEDIWPLADYITVHTPLIP-QTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEE 218 (333)
Q Consensus 143 ---~~~l~ell~~aDvV~l~~P~t~-~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~E 218 (333)
..+++++++++|+|+.|++... .+..++.++.++.||+|.++||++-. .| |+ +|++ |
T Consensus 217 ~~~~~~l~~~~~~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~-------------~g---g~-~d~~--e 277 (369)
T 2eez_A 217 TATEANIKKSVQHADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVD-------------QG---GC-VETI--R 277 (369)
T ss_dssp ECCHHHHHHHHHHCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC------------------------------
T ss_pred cCCHHHHHHHHhCCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEecC-------------CC---CC-CCcc--c
Confidence 2257788899999999998765 57788899999999999999999721 12 44 9998 5
Q ss_pred CCCCccchhhcCCCcEE---------EccCCCCC--cHHHHHHHHHHHHHHHHHhHcCCCCCCCCCCcccc
Q psy6348 219 PPKSEQTFELIKHPKVI---------VTPHLGAS--TKEAQIRVAVEIAEQFIALANTNPQYTSIQGVLNA 278 (333)
Q Consensus 219 P~~~~~~~~L~~~pnvi---------~TPHi~~~--t~ea~~~~~~~~~~~i~~~~~~~~~~~~~~~~vn~ 278 (333)
|.+.+ .|++..+|+. .|||.++. +.+....+...+.+++..+..+. .+++.+|.
T Consensus 278 p~~~~--~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~l~~l~~~g~~~~~~~~----~l~~~~~~ 342 (369)
T 2eez_A 278 PTTHA--EPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPYVLKLAEKGLDALLEDA----ALLKGLNT 342 (369)
T ss_dssp ----------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHHHHHHHHHTTHHHHSCH----HHHTTEEE
T ss_pred CCCCC--CCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHHHHHHHhcChhhhhcCh----HHhcCEEe
Confidence 64322 4788889999 78998874 56667778888888874466664 56666664
No 44
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.78 E-value=5.7e-19 Score=174.00 Aligned_cols=155 Identities=20% Similarity=0.213 Sum_probs=121.9
Q ss_pred cccCcCccC-hhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEecC
Q psy6348 29 AGTGVDNID-LTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLG 107 (333)
Q Consensus 29 ~g~G~d~iD-~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG 107 (333)
+++|+.... +.++.+.+|+|+|.+.+.+.+..+...+.--++.+.+ + ...+.++.||++||+|+|
T Consensus 155 TttGv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi-------~-------ratg~~L~GktVgIiG~G 220 (436)
T 3h9u_A 155 TTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGI-------K-------RATDVMIAGKTACVCGYG 220 (436)
T ss_dssp SHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHH-------H-------HHHCCCCTTCEEEEECCS
T ss_pred cCcChHHHHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHHH-------H-------HhcCCcccCCEEEEEeeC
Confidence 577776653 3456789999999987666664443333222221111 0 013578999999999999
Q ss_pred hHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEE
Q psy6348 108 RIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVN 186 (333)
Q Consensus 108 ~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN 186 (333)
.||+.+|++|+++|++|++||+++. ...+...|++..++++++++||+|+++ +.|+++|+++.|+.||+|++|||
T Consensus 221 ~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~ADVVilt----~gt~~iI~~e~l~~MK~gAIVIN 296 (436)
T 3h9u_A 221 DVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIFVTT----TGNDDIITSEHFPRMRDDAIVCN 296 (436)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEEC----SSCSCSBCTTTGGGCCTTEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCCEEEEC----CCCcCccCHHHHhhcCCCcEEEE
Confidence 9999999999999999999999763 234566788888999999999999973 46889999999999999999999
Q ss_pred ccCCcc-cchHhHHhh
Q psy6348 187 VARGGI-VDENALLDS 201 (333)
Q Consensus 187 ~aRg~~-vd~~aL~~a 201 (333)
+|||.+ ||.++|.+.
T Consensus 297 vgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 297 IGHFDTEIQVAWLKAN 312 (436)
T ss_dssp CSSSGGGBCHHHHHHH
T ss_pred eCCCCCccCHHHHHhh
Confidence 999997 999999864
No 45
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.75 E-value=1e-18 Score=171.63 Aligned_cols=185 Identities=16% Similarity=0.180 Sum_probs=131.3
Q ss_pred ceEEEEeCCCCCCHHHhccc-C-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHH---HHHhcCCCc
Q psy6348 2 YDGLVVRSDTKVTAEVLQAS-N-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLI---SALSRNVPQ 76 (333)
Q Consensus 2 ~daliv~s~~~v~~~~l~~~-~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~---l~~~R~i~~ 76 (333)
+|+++ ....+ +++.++.. + +++|+..+.|+|++|++++.++||.|++.. +++|++.++. ++..+.+..
T Consensus 73 adiil-~vk~p-~~~~i~~l~~~~~li~~~~~~~d~~~~~al~~~gI~v~~~e-----~v~~~~~a~~l~~l~~~a~~ag 145 (401)
T 1x13_A 73 SEIIL-KVNAP-LDDEIALLNPGTTLVSFIWPAQNPELMQKLAERNVTVMAMD-----SVPRISRAQSLDALSSMANIAG 145 (401)
T ss_dssp SSEEE-CSSCC-CHHHHTTCCTTCEEEECCCGGGCHHHHHHHHHTTCEEEEGG-----GCCCSGGGGGGCHHHHHHHHHH
T ss_pred CCeEE-EeCCC-CHHHHHHhcCCCcEEEEecCCCCHHHHHHHHHCCCEEEEee-----hhhhhhhhcccchHHHHHHHHH
Confidence 57755 33444 56777876 5 999999999999999999999999998653 3333333321 111111111
Q ss_pred cchhhhcCcccccC-CCc-----cccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCcccc-----
Q psy6348 77 GCQSLKEGKWDRKL-YTG-----TELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASL----- 144 (333)
Q Consensus 77 ~~~~~~~g~w~~~~-~~g-----~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~----- 144 (333)
+..++.+.|.... +.+ .++.|++|+|+|+|.||..+++.++++|++|+++|++.. .+.++++|..++
T Consensus 146 -~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~ 224 (401)
T 1x13_A 146 -YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFK 224 (401)
T ss_dssp -HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC---
T ss_pred -HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEeccc
Confidence 2222222221111 111 158899999999999999999999999999999999863 345566776543
Q ss_pred -----------------------ChhhhccCCCEEEEe--cCCchhhHhhccHHHHhccCCCcEEEEcc--CCcccch
Q psy6348 145 -----------------------GLEDIWPLADYITVH--TPLIPQTKNLINAEVLKKCKKGVRVVNVA--RGGIVDE 195 (333)
Q Consensus 145 -----------------------~l~ell~~aDvV~l~--~P~t~~t~~li~~~~~~~mk~gailIN~a--Rg~~vd~ 195 (333)
+++++++++|+|+.| +|.. .+..+++++.++.||+|++|||++ ||+.+++
T Consensus 225 ~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~aDvVI~~~~~pg~-~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 225 EEAGSGDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGK-PAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp -----CCHHHHHHSHHHHHHHHHHHHHHHHHCSEEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred ccccccccchhhccHHHHHHHHHHHHHHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 267888899999999 5532 356888999999999999999999 8887665
No 46
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.74 E-value=6.3e-18 Score=166.63 Aligned_cols=154 Identities=20% Similarity=0.187 Sum_probs=116.7
Q ss_pred cccCcCccC-hhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEecC
Q psy6348 29 AGTGVDNID-LTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLG 107 (333)
Q Consensus 29 ~g~G~d~iD-~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG 107 (333)
+++|+-..- +.......++++|...+ +..+-+-....+.+.+..+.. ...+.++.|||+||+|+|
T Consensus 191 TtTGv~rL~~m~~~g~L~~PvinVnds----~tK~~fDn~yG~~eslvdgI~----------Ratg~~L~GKTVgVIG~G 256 (464)
T 3n58_A 191 TTTGVNRLYQLQKKGLLPFPAINVNDS----VTKSKFDNKYGCKESLVDGIR----------RGTDVMMAGKVAVVCGYG 256 (464)
T ss_dssp SHHHHHHHHHHHHHTCCCSCEEECTTS----HHHHTTHHHHHHHHHHHHHHH----------HHHCCCCTTCEEEEECCS
T ss_pred cccchHHHHHHHHcCCCCCCEEeeccH----hhhhhhhhhhcchHHHHHHHH----------HhcCCcccCCEEEEECcC
Confidence 577776652 33445678899998653 334433333332222111110 123678999999999999
Q ss_pred hHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEE
Q psy6348 108 RIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVN 186 (333)
Q Consensus 108 ~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN 186 (333)
.||+.+|+++++|||+|+++|+.+. ...+...|++..++++++++||+|+++. .|+++|+++.|+.||+|++|||
T Consensus 257 ~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv~at----gt~~lI~~e~l~~MK~GAILIN 332 (464)
T 3n58_A 257 DVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTT----GNKDVITIDHMRKMKDMCIVGN 332 (464)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEEECC----SSSSSBCHHHHHHSCTTEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEEECC----CCccccCHHHHhcCCCCeEEEE
Confidence 9999999999999999999988652 2344567888889999999999999864 4689999999999999999999
Q ss_pred ccCCcc-cchHhHHh
Q psy6348 187 VARGGI-VDENALLD 200 (333)
Q Consensus 187 ~aRg~~-vd~~aL~~ 200 (333)
++||.+ +|.++|.+
T Consensus 333 vGRgdvEID~~aL~~ 347 (464)
T 3n58_A 333 IGHFDNEIQVAALRN 347 (464)
T ss_dssp CSSSTTTBTCGGGTT
T ss_pred cCCCCcccCHHHHHh
Confidence 999998 99999974
No 47
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.72 E-value=9.2e-18 Score=163.75 Aligned_cols=188 Identities=15% Similarity=0.175 Sum_probs=130.3
Q ss_pred CceEEEEeCCCCC----CHHHhcccC--cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCC
Q psy6348 1 KYDGLVVRSDTKV----TAEVLQASN--LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNV 74 (333)
Q Consensus 1 ~~daliv~s~~~v----~~~~l~~~~--Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i 74 (333)
++|+++.. ..++ +++.++.++ +++++..+.+.|+.|++++.++||.+++... ....+++..+.+ |+..+.+
T Consensus 67 ~adiil~v-~~p~~~~~~~~~i~~l~~~~~~i~~~~~~~~~~~~~~~~~~gi~~~~~e~-~~~~~~~~~l~~-l~~~a~~ 143 (384)
T 1l7d_A 67 QADVVWKV-QRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMEL-MPRISRAQSMDI-LSSQSNL 143 (384)
T ss_dssp SCSEEEEE-ECCCCGGGSCCGGGGSCTTCEEEEECCGGGCHHHHHHHHHTTCEEEEGGG-CCCSGGGGGGCH-HHHHHHH
T ss_pred CCCEEEEe-cCcccccCCHHHHHhhccCCEEEEEecccCCHHHHHHHHHCCCEEEEecc-ccccccccccch-hhHHHHH
Confidence 47887755 3466 788888885 8899999999999999999999999998421 111111112211 1111111
Q ss_pred CccchhhhcCcccccC-----CCc-cccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc---
Q psy6348 75 PQGCQSLKEGKWDRKL-----YTG-TELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL--- 144 (333)
Q Consensus 75 ~~~~~~~~~g~w~~~~-----~~g-~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~--- 144 (333)
..+..+..+.|.... ..+ .++.|++++|+|+|.||+.+++.++++|++|+++|++. ..+.++++|...+
T Consensus 144 -ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~ 222 (384)
T 1l7d_A 144 -AGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVD 222 (384)
T ss_dssp -HHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-
T ss_pred -HHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeec
Confidence 111222222221100 111 37899999999999999999999999999999999987 4455666775433
Q ss_pred C---------------------------hhhhccCCCEEEEec--CCchhhHhhccHHHHhccCCCcEEEEcc--CCccc
Q psy6348 145 G---------------------------LEDIWPLADYITVHT--PLIPQTKNLINAEVLKKCKKGVRVVNVA--RGGIV 193 (333)
Q Consensus 145 ~---------------------------l~ell~~aDvV~l~~--P~t~~t~~li~~~~~~~mk~gailIN~a--Rg~~v 193 (333)
. ++++++++|+|+.++ |..+ +.++++++.++.||+|+++||++ ||+.+
T Consensus 223 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~-~~~li~~~~l~~mk~g~vivdva~~~gg~~ 301 (384)
T 1l7d_A 223 DEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKP-APVLITEEMVTKMKPGSVIIDLAVEAGGNC 301 (384)
T ss_dssp ----------------------CCHHHHHHHHHTTCSEEEECCCCTTSC-CCCCSCHHHHTTSCTTCEEEETTGGGTCSS
T ss_pred ccccccccccccchhhcCHHHHhhhHHHHHHHhCCCCEEEECCccCCCC-CCeeeCHHHHhcCCCCCEEEEEecCCCCCe
Confidence 1 678889999999887 4332 45688899999999999999998 76543
No 48
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.70 E-value=1.2e-18 Score=171.13 Aligned_cols=208 Identities=17% Similarity=0.160 Sum_probs=157.1
Q ss_pred cceEEEcccCcCccChhhHh-----hCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCccccc----CCCc
Q psy6348 23 LQVVGRAGTGVDNIDLTAAT-----RKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRK----LYTG 93 (333)
Q Consensus 23 Lk~I~~~g~G~d~iD~~aa~-----~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~----~~~g 93 (333)
++.|.+.|+|+|++++.++. ++++.++|.+|+ ..+++++.+..++.+.|++....... .+.|... ....
T Consensus 82 ~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~-~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~av~~a~ 159 (404)
T 1gpj_A 82 VRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGT-LDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSAAVELAE 159 (404)
T ss_dssp HHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHHHHHHHH
T ss_pred hhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCC-chHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHHHHHHHH
Confidence 88999999999999998887 889999999887 67899999999999999987665443 3445311 0001
Q ss_pred ---cccCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCCH--HHHHhcCccc---cChhhhccCCCEEEEecCCch
Q psy6348 94 ---TELYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVSV--EDAAKLNIAS---LGLEDIWPLADYITVHTPLIP 164 (333)
Q Consensus 94 ---~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~--~~a~~~gv~~---~~l~ell~~aDvV~l~~P~t~ 164 (333)
.++.|++++|||+|.||+.+++.++++|+ +|+++|++... +.++++|... .++++++.++|+|+.|+|.
T Consensus 160 ~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~-- 237 (404)
T 1gpj_A 160 RELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAA-- 237 (404)
T ss_dssp HHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSS--
T ss_pred HHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCC--
Confidence 14789999999999999999999999999 99999997633 3455667643 3577888999999999874
Q ss_pred hhHhhccHHHHhc--cC----CCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcEEE--
Q psy6348 165 QTKNLINAEVLKK--CK----KGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIV-- 236 (333)
Q Consensus 165 ~t~~li~~~~~~~--mk----~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnvi~-- 236 (333)
+..+++.+.++. || ++.++||++ +|... ..+++++|||++
T Consensus 238 -~~~~~~~~~l~~~~lk~r~~~~~v~vdia-----------------------------~P~~i--~~~l~~l~~v~l~d 285 (404)
T 1gpj_A 238 -PHPVIHVDDVREALRKRDRRSPILIIDIA-----------------------------NPRDV--EEGVENIEDVEVRT 285 (404)
T ss_dssp -SSCCBCHHHHHHHHHHCSSCCCEEEEECC-----------------------------SSCSB--CTTGGGSTTEEEEE
T ss_pred -CCceecHHHHHHHHHhccCCCCEEEEEcc-----------------------------CCCCC--CccccccCCeEEEe
Confidence 345677777776 42 455666654 34321 147889999999
Q ss_pred ccCCCCCcHHHHH----------HHHHHHHHHHHHhHcCC
Q psy6348 237 TPHLGASTKEAQI----------RVAVEIAEQFIALANTN 266 (333)
Q Consensus 237 TPHi~~~t~ea~~----------~~~~~~~~~i~~~~~~~ 266 (333)
+||+++.+.+++. .+..+.++++..|.++.
T Consensus 286 ~d~l~~~~~~~~~~r~~~~~~~~~li~q~~~~f~~w~~~~ 325 (404)
T 1gpj_A 286 IDDLRVIARENLERRRKEIPKVEKLIEEELSTVEEELEKL 325 (404)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999998888765 45556666777766653
No 49
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.67 E-value=1e-16 Score=157.74 Aligned_cols=153 Identities=20% Similarity=0.219 Sum_probs=114.8
Q ss_pred cccCcCccC-hhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEecC
Q psy6348 29 AGTGVDNID-LTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLG 107 (333)
Q Consensus 29 ~g~G~d~iD-~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG 107 (333)
+.+|+-..- +....+..++|+|...+-+.+--+-..+.-.++.. .++ ...+.++.||+++|+|+|
T Consensus 164 TttGv~rl~~~~~~g~L~~Pvi~vnds~tK~~fDn~yGt~~s~~~-------gi~-------rat~~~L~GktV~ViG~G 229 (435)
T 3gvp_A 164 SVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESILD-------GLK-------RTTDMMFGGKQVVVCGYG 229 (435)
T ss_dssp CHHHHHHHTCC--CCCCCSCEEECTTCHHHHHHHTHHHHHHHHHH-------HHH-------HHHCCCCTTCEEEEECCS
T ss_pred cchhHHHHHHHHHcCCCCCCEEEecchhhhhhhhhhhhhHHHHHH-------HHH-------HhhCceecCCEEEEEeeC
Confidence 577776653 33445688999999875555443322211111110 000 013568999999999999
Q ss_pred hHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEE
Q psy6348 108 RIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVN 186 (333)
Q Consensus 108 ~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN 186 (333)
.||+.+|++|++||++|++||+.+. ...+...|++..++++++++||+|++| +.|+++|+++.|+.||+|+++||
T Consensus 230 ~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi~a----tgt~~lI~~e~l~~MK~gailIN 305 (435)
T 3gvp_A 230 EVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVITC----TGNKNVVTREHLDRMKNSCIVCN 305 (435)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEEC----SSCSCSBCHHHHHHSCTTEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEEEC----CCCcccCCHHHHHhcCCCcEEEE
Confidence 9999999999999999999998652 334566788778999999999999995 46789999999999999999999
Q ss_pred ccCCcc-cchHhHH
Q psy6348 187 VARGGI-VDENALL 199 (333)
Q Consensus 187 ~aRg~~-vd~~aL~ 199 (333)
++||.+ +|.++|.
T Consensus 306 vgrg~~EId~~~L~ 319 (435)
T 3gvp_A 306 MGHSNTEIDVASLR 319 (435)
T ss_dssp CSSTTTTBTGGGGC
T ss_pred ecCCCccCCHHHHH
Confidence 999998 7877774
No 50
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.48 E-value=7e-14 Score=132.13 Aligned_cols=114 Identities=19% Similarity=0.224 Sum_probs=98.9
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhccH--HH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLINA--EV 174 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~--~~ 174 (333)
|+||+||+|.||..||++|...|++|++||++.+ .+...+.|...+ ++.|+++.||+|++|+|..+..+.++.. ..
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 6899999999999999999999999999999763 345566787765 8999999999999999999988888743 37
Q ss_pred HhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEecc
Q psy6348 175 LKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDV 214 (333)
Q Consensus 175 ~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV 214 (333)
++.+++|.++||++...+-+...+.+.+++..+. .+|.
T Consensus 84 ~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~--~lDa 121 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLA--MLDA 121 (300)
T ss_dssp TTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCE--EEEC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEec
Confidence 7889999999999999999999999999988774 5664
No 51
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.47 E-value=1.2e-13 Score=130.24 Aligned_cols=114 Identities=17% Similarity=0.152 Sum_probs=96.4
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhccHHHHh
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLINAEVLK 176 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~ 176 (333)
+||||||+|.||..+|++|...|++|++||++... +...+.|...+ ++.|++++||+|++|+|..+..+.++..+.+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 58999999999999999999999999999997633 44456677665 89999999999999999888888888888999
Q ss_pred ccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEecc
Q psy6348 177 KCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDV 214 (333)
Q Consensus 177 ~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV 214 (333)
.+++|.++|+++...+-..+.+.+.+++..+. .+|.
T Consensus 86 ~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~--~lda 121 (297)
T 4gbj_A 86 KLGKDGVHVSMSTISPETSRQLAQVHEWYGAH--YVGA 121 (297)
T ss_dssp HHCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEEC
T ss_pred hcCCCeEEEECCCCChHHHHHHHHHHHhcCCc--eecC
Confidence 99999999999999999999999999988775 4553
No 52
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.46 E-value=1.3e-12 Score=124.08 Aligned_cols=148 Identities=19% Similarity=0.221 Sum_probs=105.2
Q ss_pred ccCCCEEEEEecChHHHHHHHHHhhCCC--EEEEEcCCC-CHHHHHhcCcc--c-cChhh-hccCCCEEEEecCCchhhH
Q psy6348 95 ELYGKTLAVLGLGRIGREVALRMQAFGM--KVIGFDPMV-SVEDAAKLNIA--S-LGLED-IWPLADYITVHTPLIPQTK 167 (333)
Q Consensus 95 ~l~gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~-~~~~a~~~gv~--~-~~l~e-ll~~aDvV~l~~P~t~~t~ 167 (333)
++..++|||||+|.||+.+|+.|+..|+ +|++||+.. ..+.+.+.|+. . .++++ ++++||+|++|+|.. .+.
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~-~~~ 108 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFR 108 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGG-GHH
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHH-HHH
Confidence 4456899999999999999999999999 999999976 34556667762 2 37888 899999999999954 345
Q ss_pred hhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCC--CCCccchhhcCCCcEEEccCCCCCcH
Q psy6348 168 NLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEP--PKSEQTFELIKHPKVIVTPHLGASTK 245 (333)
Q Consensus 168 ~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP--~~~~~~~~L~~~pnvi~TPHi~~~t~ 245 (333)
.++ ++....+++++++++++.......+++.+.+...-+.+.- ++..|- +.. ....|+....+++||+-+. +.
T Consensus 109 ~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~~~v~~hP--m~G~e~sG~~~-A~~~Lf~g~~~il~~~~~~-~~ 183 (314)
T 3ggo_A 109 EIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGGHP--IAGTEKSGVEY-SLDNLYEGKKVILTPTKKT-DK 183 (314)
T ss_dssp HHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECEEE--CCCCCCCSGGG-CCTTTTTTCEEEECCCTTS-CH
T ss_pred HHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCCCEEecCc--ccCCcccchhh-hhhhhhcCCEEEEEeCCCC-CH
Confidence 555 5667789999999999887765566777766542222222 233321 111 1135778889999998543 44
Q ss_pred HHH
Q psy6348 246 EAQ 248 (333)
Q Consensus 246 ea~ 248 (333)
++.
T Consensus 184 ~~~ 186 (314)
T 3ggo_A 184 KRL 186 (314)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 53
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.45 E-value=1.4e-13 Score=130.72 Aligned_cols=113 Identities=16% Similarity=0.119 Sum_probs=95.9
Q ss_pred cCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhccH-
Q psy6348 96 LYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLINA- 172 (333)
Q Consensus 96 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~- 172 (333)
...++|||||+|.||+.+|+.|...|++|++||+... .+...+.|+... ++++++++||+|++|+|....++.++..
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~ 108 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQ 108 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTT
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcch
Confidence 4567999999999999999999999999999999763 244455577654 8999999999999999977777777643
Q ss_pred HHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 173 EVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 173 ~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
+.++.+++|.++||++++.+.+.+.+.+.+++..+.
T Consensus 109 ~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~ 144 (320)
T 4dll_A 109 GVAAAMKPGSLFLDMASITPREARDHAARLGALGIA 144 (320)
T ss_dssp CHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCE
Confidence 567789999999999999999999999999887664
No 54
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.43 E-value=2.8e-12 Score=118.75 Aligned_cols=141 Identities=18% Similarity=0.248 Sum_probs=102.5
Q ss_pred CEEEEEecChHHHHHHHHHhhCCC--EEEEEcCCCC-HHHHHhcCcc---ccChhhhcc-CCCEEEEecCCchhhHhhcc
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGM--KVIGFDPMVS-VEDAAKLNIA---SLGLEDIWP-LADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~-~~~a~~~gv~---~~~l~ell~-~aDvV~l~~P~t~~t~~li~ 171 (333)
++|||||+|.||+.+|+.|+..|+ +|++||+... .+.+.+.|+. ..+++++++ +||+|++|+|.. .+..++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~~ 80 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIAK 80 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHHH
Confidence 589999999999999999999998 9999999752 3445566764 236888999 999999999953 5566653
Q ss_pred HHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCC-CccchhhcCCCcEEEccCCCCC
Q psy6348 172 AEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPK-SEQTFELIKHPKVIVTPHLGAS 243 (333)
Q Consensus 172 ~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~-~~~~~~L~~~pnvi~TPHi~~~ 243 (333)
+..+.++++.++++++++.....+.+.+.+..+.+.+ .-++..|... .....+++..++++++||.++.
T Consensus 81 -~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~v~~--~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~ 150 (281)
T 2g5c_A 81 -KLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGG--HPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTD 150 (281)
T ss_dssp -HHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECE--EEECCCSCCSGGGCCSSTTTTCEEEECCCSSSC
T ss_pred -HHHhhCCCCcEEEECCCCcHHHHHHHHHhccccceee--ccccCCccCChhhhhhHHhCCCCEEEecCCCCC
Confidence 4667799999999999988777778888887642211 1233333211 0011356777889999997764
No 55
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.42 E-value=2e-13 Score=128.80 Aligned_cols=115 Identities=11% Similarity=0.067 Sum_probs=96.5
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhcc
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~ 171 (333)
.++..++|||||+|.||+.+|++|...|++|++||++.. .+...+.|+... ++++++++||+|++++|....++.++.
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~ 84 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLG 84 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHT
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhc
Confidence 355678999999999999999999999999999999763 344455577654 899999999999999998777888875
Q ss_pred HHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 172 AEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 172 ~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
.+.+..+++|.++||+++..+...+.+.+.+++..+.
T Consensus 85 ~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~ 121 (306)
T 3l6d_A 85 MPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGH 121 (306)
T ss_dssp STTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCE
T ss_pred ccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 3345668899999999999999999999999876554
No 56
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.42 E-value=6.4e-13 Score=126.18 Aligned_cols=138 Identities=14% Similarity=0.087 Sum_probs=98.4
Q ss_pred cchhhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCC-CEEEEEcCCCC--------HHHHHhcCcccc-Ch
Q psy6348 77 GCQSLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFG-MKVIGFDPMVS--------VEDAAKLNIASL-GL 146 (333)
Q Consensus 77 ~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G-~~V~~~d~~~~--------~~~a~~~gv~~~-~l 146 (333)
++.+.+.+.|.+..+... -.++|||||+|.||..+|+.|...| ++|++||+... .+...+.|+ .. ++
T Consensus 5 ~~~~~~~~~~~~~~~~~~--M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~~~s~ 81 (317)
T 4ezb_A 5 HHHSSGVDLGTENLYFQS--MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-EPLDD 81 (317)
T ss_dssp ----------CCCHHHHT--SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-EEESS
T ss_pred cccccccccCcccCcccc--cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-CCCCH
Confidence 344445566776544221 1378999999999999999999999 99999998751 122344576 56 88
Q ss_pred hhhccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCC
Q psy6348 147 EDIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEP 219 (333)
Q Consensus 147 ~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP 219 (333)
++++++||+|++|+|.......+ .+..+.++++.++||+++..+...+.+.+.+++..+....--|+.++|
T Consensus 82 ~e~~~~aDvVi~avp~~~~~~~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~ 152 (317)
T 4ezb_A 82 VAGIACADVVLSLVVGAATKAVA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARVP 152 (317)
T ss_dssp GGGGGGCSEEEECCCGGGHHHHH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCST
T ss_pred HHHHhcCCEEEEecCCHHHHHHH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCch
Confidence 99999999999999976665544 677788999999999999999999999999987655422222455443
No 57
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.42 E-value=3.4e-13 Score=127.40 Aligned_cols=116 Identities=11% Similarity=0.155 Sum_probs=96.8
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhc
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLI 170 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li 170 (333)
......++|||||+|.||+.+|+.|...|++|++||++.. .+...+.|+... ++++++++||+|++|+|....++.++
T Consensus 16 ~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~ 95 (310)
T 3doj_A 16 PRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVV 95 (310)
T ss_dssp --CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred cccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHH
Confidence 4455668999999999999999999999999999999873 355566787664 79999999999999999777777766
Q ss_pred --cHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 171 --NAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 171 --~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
.++.++.+++|.++||+++..+...+.+.+.+++..+.
T Consensus 96 ~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~ 135 (310)
T 3doj_A 96 FDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGR 135 (310)
T ss_dssp HSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred hCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 24566789999999999999999999999998876554
No 58
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.40 E-value=6.7e-13 Score=124.55 Aligned_cols=109 Identities=20% Similarity=0.232 Sum_probs=95.0
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhccHHHH
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLINAEVL 175 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~~~~ 175 (333)
.++|||||+|.||+.+|+.|...|++|++||+... .+...+.|+... +++++++ ||+|++|+|....++.++ ++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHH
Confidence 36899999999999999999999999999999873 455666787765 7999999 999999999777777777 6777
Q ss_pred hccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 176 KKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 176 ~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
+.+++|.++||+++..+...+.+.+.+.+..+.
T Consensus 93 ~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~ 125 (296)
T 3qha_A 93 GHAKPGTVIAIHSTISDTTAVELARDLKARDIH 125 (296)
T ss_dssp TTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCE
T ss_pred HhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCE
Confidence 889999999999999999999999999876554
No 59
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.39 E-value=9.5e-13 Score=124.58 Aligned_cols=126 Identities=10% Similarity=0.048 Sum_probs=89.5
Q ss_pred chhhhcCcccccC-CC-ccccCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC---CHHHHHhcCcccc-Chhhhc
Q psy6348 78 CQSLKEGKWDRKL-YT-GTELYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV---SVEDAAKLNIASL-GLEDIW 150 (333)
Q Consensus 78 ~~~~~~g~w~~~~-~~-g~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~---~~~~a~~~gv~~~-~l~ell 150 (333)
++++|++.|.+.. +. ......++|||||+|.||+.+|+.|...|+ +|++||++. ..+...+.|+... ++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~ 81 (312)
T 3qsg_A 2 HHHHHHSSGVDLGTENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVA 81 (312)
T ss_dssp -----------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHH
T ss_pred CcccccccccccCcccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHH
Confidence 4556777775432 11 223446799999999999999999999999 999999963 2344556687665 789999
Q ss_pred cCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcC
Q psy6348 151 PLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCG 205 (333)
Q Consensus 151 ~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g 205 (333)
++||+|++|+|....... + .+..+.++++.++||+++.......++.+.+.+.
T Consensus 82 ~~aDvVi~~vp~~~~~~~-~-~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~ 134 (312)
T 3qsg_A 82 GECDVIFSLVTAQAALEV-A-QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRH 134 (312)
T ss_dssp HHCSEEEECSCTTTHHHH-H-HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHH
T ss_pred hcCCEEEEecCchhHHHH-H-HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhh
Confidence 999999999997665543 3 6677889999999999999999999999998775
No 60
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.38 E-value=9.6e-13 Score=122.57 Aligned_cols=110 Identities=13% Similarity=0.094 Sum_probs=94.4
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhcc--HHH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLIN--AEV 174 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~--~~~ 174 (333)
++|||||+|.||+.+|+.|...|++|++||++. ..+...+.|+... ++++++++||+|++|+|....++.++. ++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 689999999999999999999999999999986 3355566677665 899999999999999997777777762 556
Q ss_pred HhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 175 LKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 175 ~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
.+.+++|.++||+++..+.+.+.+.+.+++..+.
T Consensus 82 ~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~ 115 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGR 115 (287)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred hhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCE
Confidence 6789999999999999999999999999876554
No 61
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.37 E-value=1.2e-12 Score=126.32 Aligned_cols=114 Identities=28% Similarity=0.297 Sum_probs=96.4
Q ss_pred cc-ccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCccccChhhhcc-CCCEEEEecCCchhhHhh
Q psy6348 93 GT-ELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASLGLEDIWP-LADYITVHTPLIPQTKNL 169 (333)
Q Consensus 93 g~-~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~~l~ell~-~aDvV~l~~P~t~~t~~l 169 (333)
|. ++.|||++|+|+|+||+.+|++++++|++|+++|++.. .+.+++.+.+.++.++++. +||+++.| .+.++
T Consensus 169 G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~-----A~~~~ 243 (355)
T 1c1d_A 169 GLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPC-----AMGGV 243 (355)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEEC-----SCSCC
T ss_pred CCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHh-----HHHhh
Confidence 55 79999999999999999999999999999999998753 2334557877788899988 89999853 67899
Q ss_pred ccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEecc
Q psy6348 170 INAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDV 214 (333)
Q Consensus 170 i~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV 214 (333)
|+.+.++.|| ..+++|.+++.+.++++ .++|+++.+. ++=|.
T Consensus 244 I~~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIl-v~Pd~ 285 (355)
T 1c1d_A 244 ITTEVARTLD-CSVVAGAANNVIADEAA-SDILHARGIL-YAPDF 285 (355)
T ss_dssp BCHHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCE-ECCHH
T ss_pred cCHHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEE-EECCe
Confidence 9999999998 68999999999999777 5899998886 44443
No 62
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.36 E-value=1.7e-12 Score=125.57 Aligned_cols=119 Identities=14% Similarity=0.221 Sum_probs=98.4
Q ss_pred cCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCcccc-ChhhhccCC---CEEEEecCCchhhHhhc
Q psy6348 96 LYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASL-GLEDIWPLA---DYITVHTPLIPQTKNLI 170 (333)
Q Consensus 96 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~-~l~ell~~a---DvV~l~~P~t~~t~~li 170 (333)
+.+++|||||+|.||+.+|+.|...|++|.+||+... .+...+.|+... +++++++.+ |+|++++|.. .++.++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML 98 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH
Confidence 5678999999999999999999999999999999763 344455677654 799999888 9999999976 777777
Q ss_pred cHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCC
Q psy6348 171 NAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFC 216 (333)
Q Consensus 171 ~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~ 216 (333)
.+.+..+++|.++|+++++...+...+.+.+++..+......|+.
T Consensus 99 -~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsG 143 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSG 143 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEEC
T ss_pred -HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCC
Confidence 567788999999999999999999999999988877644444543
No 63
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.36 E-value=1.3e-12 Score=122.90 Aligned_cols=111 Identities=14% Similarity=0.148 Sum_probs=93.3
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCccc--cChhhhccCCCEEEEecCCchhhHhhcc--H
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIAS--LGLEDIWPLADYITVHTPLIPQTKNLIN--A 172 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~--~~l~ell~~aDvV~l~~P~t~~t~~li~--~ 172 (333)
.++|||||+|.||+.+|+.|...|++|++||++.. .+...+.|... .++++++++||+|++++|.....+.++. +
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 46899999999999999999999999999999763 34455567655 4899999999999999997667777763 4
Q ss_pred HHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 173 EVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 173 ~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
+..+.+++|.++||+++..+...+.+.+.+.+..+.
T Consensus 87 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~ 122 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLN 122 (303)
T ss_dssp CCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCE
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCe
Confidence 566789999999999999999999999998876553
No 64
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.34 E-value=9.4e-13 Score=122.63 Aligned_cols=110 Identities=14% Similarity=0.133 Sum_probs=93.3
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhcc--HHH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLIN--AEV 174 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~--~~~ 174 (333)
++|||||+|.||+.+|+.|...|++|++||++.. .+...+.|+... ++++++++||+|++|+|....++.++. ++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 5899999999999999999999999999999873 355556677665 899999999999999997767777662 456
Q ss_pred HhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 175 LKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 175 ~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
++.+++|.++||++++.+...+.+.+.+++..+.
T Consensus 82 ~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~ 115 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGR 115 (287)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 6789999999999999999999999988876554
No 65
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.32 E-value=3.2e-12 Score=119.67 Aligned_cols=109 Identities=18% Similarity=0.208 Sum_probs=92.5
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhccH--HH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLINA--EV 174 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~--~~ 174 (333)
++|||||+|.||+.+|+.|...|++|++||++.. .+...+.|+... ++++++++||+|++|+|....++.++.. +.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~ 83 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhH
Confidence 6899999999999999999999999999999752 344555677654 7899999999999999977777777642 56
Q ss_pred HhccCCCcEEEEccCCcccchHhHHhhhhcCCc
Q psy6348 175 LKKCKKGVRVVNVARGGIVDENALLDSLKCGHC 207 (333)
Q Consensus 175 ~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i 207 (333)
++.++++.++|+++++.....+.+.+.+.+..+
T Consensus 84 ~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~ 116 (302)
T 2h78_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGL 116 (302)
T ss_dssp GGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 778999999999999999998999999887544
No 66
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.32 E-value=7e-13 Score=127.04 Aligned_cols=139 Identities=20% Similarity=0.176 Sum_probs=99.0
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC--HHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhcc
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS--VEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~--~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 171 (333)
.++.+++|||||+|.||+.+|+.|+..|++|++||+... .+.+.+.|+...++++++++||+|++++|.. ....++.
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~~~~e~~~~aDvVilavp~~-~~~~v~~ 90 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDE-FQGRLYK 90 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHH-HHHHHHH
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEccHHHHHhcCCEEEEeCCcH-HHHHHHH
Confidence 468899999999999999999999999999999999764 3556667876668889999999999999954 3466665
Q ss_pred HHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCc-cchhhcC---CCcEEEccCCCC
Q psy6348 172 AEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSE-QTFELIK---HPKVIVTPHLGA 242 (333)
Q Consensus 172 ~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~-~~~~L~~---~pnvi~TPHi~~ 242 (333)
++..+.|++|+++++++ | ++. ..+.+.. ...+||+...|.... ....++. ..++++|||-..
T Consensus 91 ~~i~~~l~~~~ivi~~~-g--v~~--~~~~~~~----~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~~ 156 (338)
T 1np3_A 91 EEIEPNLKKGATLAFAH-G--FSI--HYNQVVP----RADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQDA 156 (338)
T ss_dssp HHTGGGCCTTCEEEESC-C--HHH--HTTSSCC----CTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEECS
T ss_pred HHHHhhCCCCCEEEEcC-C--chh--HHHhhcC----CCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCCC
Confidence 46667899999999874 2 332 2222221 123455554552211 1124555 677899999653
No 67
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.30 E-value=2.4e-11 Score=113.27 Aligned_cols=130 Identities=18% Similarity=0.112 Sum_probs=96.6
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhc-----------C--------------ccc-cChhhhcc
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKL-----------N--------------IAS-LGLEDIWP 151 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~-----------g--------------v~~-~~l~ell~ 151 (333)
++|+|||+|.||+.+|..+...|++|++||+.... +.+.+. | +.. .+++++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 69999999999999999999999999999997522 222221 1 122 36788899
Q ss_pred CCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCC
Q psy6348 152 LADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKH 231 (333)
Q Consensus 152 ~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~ 231 (333)
+||+|+.++|.+.+.+..+-++..+.+++++++++.+.+ +...++.+++... -+..++..|. | .+..
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~--~~~~~la~~~~~~-~~~ig~h~~~--p--------~~~~ 151 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST--LLPSDLVGYTGRG-DKFLALHFAN--H--------VWVN 151 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHHHHSCG-GGEEEEEECS--S--------TTTS
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC--CCHHHHHhhcCCC-cceEEEccCC--C--------cccC
Confidence 999999999988777777777888889999999966555 3456777777543 2345666653 2 2356
Q ss_pred CcEEEccCCC
Q psy6348 232 PKVIVTPHLG 241 (333)
Q Consensus 232 pnvi~TPHi~ 241 (333)
+.+.++||-.
T Consensus 152 ~lvevv~~~~ 161 (283)
T 4e12_A 152 NTAEVMGTTK 161 (283)
T ss_dssp CEEEEEECTT
T ss_pred ceEEEEeCCC
Confidence 7788999843
No 68
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.28 E-value=2.5e-11 Score=112.78 Aligned_cols=143 Identities=20% Similarity=0.190 Sum_probs=99.5
Q ss_pred CCEEEEEecChHHHHHHHHHhhC--CCEEEEEcCCCC-HHHHHhcCcc--c-cChhhhccCCCEEEEecCCchhhHhhcc
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAF--GMKVIGFDPMVS-VEDAAKLNIA--S-LGLEDIWPLADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~-~~~a~~~gv~--~-~~l~ell~~aDvV~l~~P~t~~t~~li~ 171 (333)
-++|||||+|.||+.+|+.|... |++|++||+... .+.+.+.|+. . .+++++++++|+|++++|.. ....++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~- 83 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIK-KTIDFI- 83 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHH-HHHHHH-
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHH-HHHHHH-
Confidence 36899999999999999999866 789999999752 2344456652 2 37888899999999999943 345555
Q ss_pred HHHHhc-cCCCcEEEEccCCcccchHhHHhhhhcCCceEEEec-cCCC---CCCCCccchhhcCCCcEEEccCCCCCc
Q psy6348 172 AEVLKK-CKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALD-VFCE---EPPKSEQTFELIKHPKVIVTPHLGAST 244 (333)
Q Consensus 172 ~~~~~~-mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalD-V~~~---EP~~~~~~~~L~~~pnvi~TPHi~~~t 244 (333)
.+..+. ++++.+++++++......+.+.+.+.+..++....- ++.. .|... ..+++..++++++||.++..
T Consensus 84 ~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a--~~~l~~g~~~~~~~~~~~~~ 159 (290)
T 3b1f_A 84 KILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAA--NVNLFENAYYIFSPSCLTKP 159 (290)
T ss_dssp HHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSC--CTTTTTTSEEEEEECTTCCT
T ss_pred HHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHh--hHHHhCCCeEEEecCCCCCH
Confidence 345667 899999999998877667888888775222211111 2221 22111 13577778899999987643
No 69
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.27 E-value=7.1e-12 Score=115.52 Aligned_cols=157 Identities=18% Similarity=0.167 Sum_probs=114.0
Q ss_pred CCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCccccc
Q psy6348 11 TKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRK 89 (333)
Q Consensus 11 ~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~ 89 (333)
.++.+++++.++ |+-+++...|+|.++. +.| +..|.|+.. .+++.++.|.
T Consensus 61 ~P~k~~i~~~~~~l~~~a~~~gavn~i~~----~~g----~~~g~ntd~-----~g~~~~l~~~---------------- 111 (263)
T 2d5c_A 61 LPLKEAALAHLDWVSPEAQRIGAVNTVLQ----VEG----RLFGFNTDA-----PGFLEALKAG---------------- 111 (263)
T ss_dssp TTCTTGGGGGCSEECHHHHHHTCCCEEEE----ETT----EEEEECCHH-----HHHHHHHHHT----------------
T ss_pred ccCHHHHHHHHHHHhHHHHHhCCCCcEEc----cCC----eEEEeCCCH-----HHHHHHHHHh----------------
Confidence 477888888888 9999999999999975 344 334566654 3555555431
Q ss_pred CCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH--HHHHhcCccccChhhhccCCCEEEEecCCch--h
Q psy6348 90 LYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV--EDAAKLNIASLGLEDIWPLADYITVHTPLIP--Q 165 (333)
Q Consensus 90 ~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~--~ 165 (333)
+.++.| +++|||+|.||+.+|+.|...|++|.+||++... +.+++.+....+++++ +++|+|++++|... .
T Consensus 112 ---~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~~~~~~~~-~~~Divi~~tp~~~~~~ 186 (263)
T 2d5c_A 112 ---GIPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLRAVPLEKA-REARLLVNATRVGLEDP 186 (263)
T ss_dssp ---TCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCEECCGGGG-GGCSEEEECSSTTTTCT
T ss_pred ---CCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccchhhHhhc-cCCCEEEEccCCCCCCC
Confidence 346889 9999999999999999999999999999997522 2233445554578888 99999999999763 2
Q ss_pred hHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCC
Q psy6348 166 TKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGH 206 (333)
Q Consensus 166 t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~ 206 (333)
+...+. .+.+++|.++++++.+. .+. .|.+++++..
T Consensus 187 ~~~~l~---~~~l~~g~~viD~~~~p-~~t-~l~~~a~~~g 222 (263)
T 2d5c_A 187 SASPLP---AELFPEEGAAVDLVYRP-LWT-RFLREAKAKG 222 (263)
T ss_dssp TCCSSC---GGGSCSSSEEEESCCSS-SSC-HHHHHHHHTT
T ss_pred CCCCCC---HHHcCCCCEEEEeecCC-ccc-HHHHHHHHCc
Confidence 223443 46689999999999873 333 4666666533
No 70
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.26 E-value=1.8e-11 Score=122.20 Aligned_cols=145 Identities=24% Similarity=0.238 Sum_probs=105.9
Q ss_pred cccCcCccC-hhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEecC
Q psy6348 29 AGTGVDNID-LTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLG 107 (333)
Q Consensus 29 ~g~G~d~iD-~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG 107 (333)
+.+|+.... +.+..+..|+|+|..++.+.+-.+...+.-- .+..+-|+ ..+.++.||+++|+|+|
T Consensus 209 TttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn~yGt~~-----------sl~dgi~r---~tg~~L~GKtVvVtGaG 274 (488)
T 3ond_A 209 TTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRH-----------SLPDGLMR---ATDVMIAGKVAVVAGYG 274 (488)
T ss_dssp SHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHHHHH-----------HHHHHHHH---HHCCCCTTCEEEEECCS
T ss_pred ccccHHHHHHHHHcCCCCCceecccchhhhhHhhhhccccH-----------HHHHHHHH---HcCCcccCCEEEEECCC
Confidence 577887753 2334467899999977555442222111111 11111111 23457999999999999
Q ss_pred hHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEE
Q psy6348 108 RIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVN 186 (333)
Q Consensus 108 ~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN 186 (333)
.||+.+|++|+++|++|+++|+... ...+...|+...+++++++.+|+++.+. .+.+++..+.++.||++++++|
T Consensus 275 gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~at----G~~~vl~~e~l~~mk~gaiVvN 350 (488)
T 3ond_A 275 DVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTT----GNKDIIMLDHMKKMKNNAIVCN 350 (488)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECS----SCSCSBCHHHHTTSCTTEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCC----CChhhhhHHHHHhcCCCeEEEE
Confidence 9999999999999999999998752 2445566777778999999999999764 4567899999999999999999
Q ss_pred ccCCc
Q psy6348 187 VARGG 191 (333)
Q Consensus 187 ~aRg~ 191 (333)
++++.
T Consensus 351 aG~~~ 355 (488)
T 3ond_A 351 IGHFD 355 (488)
T ss_dssp SSSTT
T ss_pred cCCCC
Confidence 99983
No 71
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.23 E-value=9.2e-12 Score=113.68 Aligned_cols=102 Identities=17% Similarity=0.144 Sum_probs=67.2
Q ss_pred cccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH---------------HHH-HhcCc-cccChh
Q psy6348 85 KWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV---------------EDA-AKLNI-ASLGLE 147 (333)
Q Consensus 85 ~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~---------------~~a-~~~gv-~~~~l~ 147 (333)
.|....+...++.+++|||||+|.||+.+|+.|...|++|++||+.... +.. ...+. ...+++
T Consensus 6 ~~~~~~~~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (245)
T 3dtt_A 6 IHHHHHHENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFA 85 (245)
T ss_dssp -------------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHH
T ss_pred ccccccccccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHH
Confidence 3434445678899999999999999999999999999999999996532 111 12232 334788
Q ss_pred hhccCCCEEEEecCCchhhHhhccHHH-HhccCCCcEEEEccC
Q psy6348 148 DIWPLADYITVHTPLIPQTKNLINAEV-LKKCKKGVRVVNVAR 189 (333)
Q Consensus 148 ell~~aDvV~l~~P~t~~t~~li~~~~-~~~mk~gailIN~aR 189 (333)
+++++||+|++++|..... ..+. +. ...+ +|.++|+++-
T Consensus 86 e~~~~aDvVilavp~~~~~-~~~~-~i~~~~l-~g~ivi~~s~ 125 (245)
T 3dtt_A 86 DVAAGAELVVNATEGASSI-AALT-AAGAENL-AGKILVDIAN 125 (245)
T ss_dssp HHHHHCSEEEECSCGGGHH-HHHH-HHCHHHH-TTSEEEECCC
T ss_pred HHHhcCCEEEEccCcHHHH-HHHH-Hhhhhhc-CCCEEEECCC
Confidence 9999999999999965443 3332 22 3334 8999999993
No 72
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.23 E-value=4.2e-11 Score=112.46 Aligned_cols=138 Identities=14% Similarity=0.094 Sum_probs=90.8
Q ss_pred ccchhhhcCcccccCCCccccCCCEEEEEe-cChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCC
Q psy6348 76 QGCQSLKEGKWDRKLYTGTELYGKTLAVLG-LGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLAD 154 (333)
Q Consensus 76 ~~~~~~~~g~w~~~~~~g~~l~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aD 154 (333)
++....++..|..... ..++||||| +|.||+.+|+.|+..|++|++||+... .+.++++++||
T Consensus 4 ~~~~~~~~~~~~~~~~-----~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~-----------~~~~~~~~~aD 67 (298)
T 2pv7_A 4 ESYANENQFGFKTINS-----DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW-----------AVAESILANAD 67 (298)
T ss_dssp ---------CCCCSCT-----TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG-----------GGHHHHHTTCS
T ss_pred hHHhhhhccCccccCC-----CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc-----------cCHHHHhcCCC
Confidence 3444556667854221 357899999 999999999999999999999998642 14677889999
Q ss_pred EEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcE
Q psy6348 155 YITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKV 234 (333)
Q Consensus 155 vV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnv 234 (333)
+|++|+|.. .+..++ ++....++++++++++++......+++.+.+. .. +....|...+. .+++....+
T Consensus 68 vVilavp~~-~~~~vl-~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~~---~~-----~v~~hP~~g~~-~~~~~g~~~ 136 (298)
T 2pv7_A 68 VVIVSVPIN-LTLETI-ERLKPYLTENMLLADLTSVKREPLAKMLEVHT---GA-----VLGLHPMFGAD-IASMAKQVV 136 (298)
T ss_dssp EEEECSCGG-GHHHHH-HHHGGGCCTTSEEEECCSCCHHHHHHHHHHCS---SE-----EEEEEECSCTT-CSCCTTCEE
T ss_pred EEEEeCCHH-HHHHHH-HHHHhhcCCCcEEEECCCCCcHHHHHHHHhcC---CC-----EEeeCCCCCCC-chhhcCCeE
Confidence 999999954 467766 44566799999999998876655555555432 11 11122211110 135556689
Q ss_pred EEccCC
Q psy6348 235 IVTPHL 240 (333)
Q Consensus 235 i~TPHi 240 (333)
++|||-
T Consensus 137 ~l~~~~ 142 (298)
T 2pv7_A 137 VRCDGR 142 (298)
T ss_dssp EEEEEE
T ss_pred EEecCC
Confidence 999974
No 73
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.21 E-value=3.1e-11 Score=117.37 Aligned_cols=98 Identities=24% Similarity=0.335 Sum_probs=80.7
Q ss_pred ccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCcccc--------------------------Chh
Q psy6348 95 ELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASL--------------------------GLE 147 (333)
Q Consensus 95 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~--------------------------~l~ 147 (333)
.+.+++++|||+|.||..+|+.++++|++|++||++.. .+.++++|.++. +++
T Consensus 181 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 181 TVKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp EECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 57899999999999999999999999999999999873 355666665432 467
Q ss_pred hhccCCCEEEEec--CCchhhHhhccHHHHhccCCCcEEEEcc--CCccc
Q psy6348 148 DIWPLADYITVHT--PLIPQTKNLINAEVLKKCKKGVRVVNVA--RGGIV 193 (333)
Q Consensus 148 ell~~aDvV~l~~--P~t~~t~~li~~~~~~~mk~gailIN~a--Rg~~v 193 (333)
+++++||+|+.++ |. ..+..+++++.++.||+|++|||+| +|+.+
T Consensus 261 e~l~~aDIVI~tv~iPg-~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~ 309 (381)
T 3p2y_A 261 DAITKFDIVITTALVPG-RPAPRLVTAAAATGMQPGSVVVDLAGETGGNC 309 (381)
T ss_dssp HHHTTCSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSB
T ss_pred HHHhcCCEEEECCCCCC-cccceeecHHHHhcCCCCcEEEEEeCCCCCcc
Confidence 8999999999875 53 2356789999999999999999996 45443
No 74
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.21 E-value=1.7e-11 Score=117.80 Aligned_cols=138 Identities=17% Similarity=0.158 Sum_probs=94.0
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc-Chhhhcc----CCCEEEEecCCchhhHhhccH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL-GLEDIWP----LADYITVHTPLIPQTKNLINA 172 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~-~l~ell~----~aDvV~l~~P~t~~t~~li~~ 172 (333)
++|||||+|.||+++|+.|+..|++|++||++. ..+.+.+.|+... +++++++ +||+|++|+|. ..+..++ +
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl-~ 86 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLL-D 86 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHH-H
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHH-H
Confidence 579999999999999999999999999999976 3455667787543 6777776 47999999994 5666666 3
Q ss_pred HHHhccCCCcEEEEccCCcccchHhHHhhhhcCCc-eEEEeccCCCCC-CCCccchhhcCCCcEEEccCCC
Q psy6348 173 EVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHC-GGAALDVFCEEP-PKSEQTFELIKHPKVIVTPHLG 241 (333)
Q Consensus 173 ~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i-~gaalDV~~~EP-~~~~~~~~L~~~pnvi~TPHi~ 241 (333)
+ +..++++++++|++..+....+++.+.+...++ .+.- ++..|- -.......|+...++++||+-+
T Consensus 87 ~-l~~~~~~~iv~Dv~Svk~~i~~~~~~~~~~~~~v~~HP--maG~e~sG~~aa~~~Lf~g~~~iltp~~~ 154 (341)
T 3ktd_A 87 A-VHTHAPNNGFTDVVSVKTAVYDAVKARNMQHRYVGSHP--MAGTANSGWSASMDGLFKRAVWVVTFDQL 154 (341)
T ss_dssp H-HHHHCTTCCEEECCSCSHHHHHHHHHTTCGGGEECEEE--CCSCC-CCGGGCCSSTTTTCEEEECCGGG
T ss_pred H-HHccCCCCEEEEcCCCChHHHHHHHHhCCCCcEecCCc--cccccccchhhhhhHHhcCCeEEEEeCCC
Confidence 3 344599999999987665444455544431111 1111 222221 0000113578888899999754
No 75
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.19 E-value=3.8e-11 Score=111.78 Aligned_cols=109 Identities=17% Similarity=0.261 Sum_probs=89.4
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhcc--HHH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLIN--AEV 174 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~--~~~ 174 (333)
++|+|||+|.||+.+|..|...|++|.+||+... .+...+.|+... +++++++++|+|++++|....++.++. ++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 4899999999999999999999999999999753 234445576654 788999999999999997777777763 345
Q ss_pred HhccCCCcEEEEccCCcccchHhHHhhhhcCCc
Q psy6348 175 LKKCKKGVRVVNVARGGIVDENALLDSLKCGHC 207 (333)
Q Consensus 175 ~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i 207 (333)
.+.+++|.++|+++.|...+.+.|.+.+.+..+
T Consensus 86 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~ 118 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIAPLASREISDALKAKGV 118 (299)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 677899999999999988888889998876433
No 76
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.18 E-value=4.1e-11 Score=120.10 Aligned_cols=118 Identities=17% Similarity=0.192 Sum_probs=94.6
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhc---Ccc---ccChhhhcc---CCCEEEEecCCchhhH
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKL---NIA---SLGLEDIWP---LADYITVHTPLIPQTK 167 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~---gv~---~~~l~ell~---~aDvV~l~~P~t~~t~ 167 (333)
.++|||||+|.||+.+|++|...|++|.+||++... +...+. +.. ..+++|+++ ++|+|++++|..+.++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 358999999999999999999999999999998733 333333 222 247888876 5999999999877888
Q ss_pred hhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCC
Q psy6348 168 NLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFC 216 (333)
Q Consensus 168 ~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~ 216 (333)
.++ .+..+.|++|.++||++++...+...+.+.+++..+.....-|+.
T Consensus 84 ~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsG 131 (484)
T 4gwg_A 84 DFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSG 131 (484)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred HHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccC
Confidence 877 677788999999999999999999999999988766544434443
No 77
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.18 E-value=3.8e-11 Score=111.90 Aligned_cols=109 Identities=19% Similarity=0.291 Sum_probs=89.3
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhcc--HHH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLIN--AEV 174 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~--~~~ 174 (333)
++|||||+|.||+.+|+.|...|++|++||+... .+...+.|+... +++++++++|+|++++|....++.++. ++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 5899999999999999999999999999999652 233344466554 788999999999999997777777774 356
Q ss_pred HhccCCCcEEEEccCCcccchHhHHhhhhcCCc
Q psy6348 175 LKKCKKGVRVVNVARGGIVDENALLDSLKCGHC 207 (333)
Q Consensus 175 ~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i 207 (333)
.+.+++|.++|++++|...+.+.|.+.+.+..+
T Consensus 85 ~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~ 117 (301)
T 3cky_A 85 LSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGI 117 (301)
T ss_dssp HHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 677899999999999987788889888876433
No 78
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.18 E-value=4.9e-11 Score=110.26 Aligned_cols=106 Identities=13% Similarity=0.108 Sum_probs=86.3
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhcCccccChhhhccCCCEEEEecCCchhhHhhccHHHHhc
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINAEVLKK 177 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~ 177 (333)
++|+|||+|.||+.+|+.|.. |++|.+||+.... +...+.|+...+++++++++|+|++++|....++.++ ++..+.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~-~~l~~~ 79 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVA-EALYPY 79 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHH-HHHTTT
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHH-HHHHhh
Confidence 479999999999999999999 9999999997632 3334445544447788899999999999766677766 555677
Q ss_pred cCCCcEEEEccCCcccchHhHHhhhhcCC
Q psy6348 178 CKKGVRVVNVARGGIVDENALLDSLKCGH 206 (333)
Q Consensus 178 mk~gailIN~aRg~~vd~~aL~~aL~~g~ 206 (333)
+++|.++|+++.+...+.+.+.+.+.+..
T Consensus 80 l~~~~~vv~~s~~~~~~~~~l~~~~~~~g 108 (289)
T 2cvz_A 80 LREGTYWVDATSGEPEASRRLAERLREKG 108 (289)
T ss_dssp CCTTEEEEECSCCCHHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHcC
Confidence 89999999999998888889999888643
No 79
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.17 E-value=3.8e-11 Score=111.42 Aligned_cols=107 Identities=16% Similarity=0.269 Sum_probs=88.3
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhccH--HH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLINA--EV 174 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~--~~ 174 (333)
++|||||+|.||+.+|+.|...|++|++|| +. ..+...+.|+... +++++++++|+|++++|....++.++.. +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 589999999999999999999999999999 65 3344555576544 7889999999999999977667777642 45
Q ss_pred HhccCCCcEEEEccCCcccchHhHHhhhhcCC
Q psy6348 175 LKKCKKGVRVVNVARGGIVDENALLDSLKCGH 206 (333)
Q Consensus 175 ~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~ 206 (333)
.+.+++|.++|+++++...+.+.+.+.+.+..
T Consensus 83 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g 114 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSISPIETKRFAQRVNEMG 114 (295)
T ss_dssp TTSCCTTEEEEECSCCCHHHHHHHHHHHHTTT
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC
Confidence 56789999999999998888889999888643
No 80
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.16 E-value=6.2e-10 Score=102.61 Aligned_cols=136 Identities=18% Similarity=0.173 Sum_probs=95.0
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCcc---ccChhhhccCCCEEEEecCCchhhHhhccHHH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIA---SLGLEDIWPLADYITVHTPLIPQTKNLINAEV 174 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~---~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~ 174 (333)
++|+|||+|.||+.+|+.|...|++|++||+... .+...+.|+. ..+++++ +++|+|++++|. ..+..++ .+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~-~~~~~~~-~~l 77 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPI-QLILPTL-EKL 77 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCH-HHHHHHH-HHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCH-HHHHHHH-HHH
Confidence 4799999999999999999999999999998752 2344555653 2378888 999999999993 4556665 455
Q ss_pred HhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCC---CCCCccchhhcCCCcEEEccCCCC
Q psy6348 175 LKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEE---PPKSEQTFELIKHPKVIVTPHLGA 242 (333)
Q Consensus 175 ~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~E---P~~~~~~~~L~~~pnvi~TPHi~~ 242 (333)
...+++++++++++.......+.+.+.+. ++.+. .-++..+ |... .+.++..+.++++|+-+.
T Consensus 78 ~~~~~~~~~vv~~~~~~~~~~~~~~~~~~--~~~~~-~p~~g~~~~gp~~a--~~~~~~g~~~~~~~~~~~ 143 (279)
T 2f1k_A 78 IPHLSPTAIVTDVASVKTAIAEPASQLWS--GFIGG-HPMAGTAAQGIDGA--EENLFVNAPYVLTPTEYT 143 (279)
T ss_dssp GGGSCTTCEEEECCSCCHHHHHHHHHHST--TCEEE-EECCCCSCSSGGGC--CTTTTTTCEEEEEECTTC
T ss_pred HhhCCCCCEEEECCCCcHHHHHHHHHHhC--CEeec-CcccCCccCCHHHH--hHHHhCCCcEEEecCCCC
Confidence 67789999999998877666666666554 33222 1233212 2111 124566668899997554
No 81
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.16 E-value=6.2e-11 Score=116.09 Aligned_cols=100 Identities=23% Similarity=0.312 Sum_probs=82.0
Q ss_pred ccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhcCcccc-----------------------------
Q psy6348 95 ELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKLNIASL----------------------------- 144 (333)
Q Consensus 95 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~gv~~~----------------------------- 144 (333)
.+.+.||+|+|+|.||..+|+.++++|++|++||++... +.++++|..++
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHH
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence 478999999999999999999999999999999998744 55566665321
Q ss_pred -ChhhhccCCCEEEEec--CCchhhHhhccHHHHhccCCCcEEEEcc--CCcccch
Q psy6348 145 -GLEDIWPLADYITVHT--PLIPQTKNLINAEVLKKCKKGVRVVNVA--RGGIVDE 195 (333)
Q Consensus 145 -~l~ell~~aDvV~l~~--P~t~~t~~li~~~~~~~mk~gailIN~a--Rg~~vd~ 195 (333)
++++++++||+|+.++ |.. .+..+++++.++.||+|++|||+| +|+.+..
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~ 321 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPGR-PAPRLVTREMLDSMKPGSVVVDLAVERGGNIEG 321 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTT
T ss_pred hHHHHHhcCCCEEEECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEeCCCCCCccc
Confidence 4678899999999875 532 456789999999999999999997 6665443
No 82
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.16 E-value=4e-11 Score=111.44 Aligned_cols=106 Identities=19% Similarity=0.253 Sum_probs=85.9
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhccH--HH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLINA--EV 174 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~--~~ 174 (333)
++|||||+|.||+.+|+.|...|++|++||++.. .+...+.|+... +++++++++|+|++++|....++.++.. ..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 3799999999999999999999999999999763 344455577654 7889999999999999977777777643 24
Q ss_pred HhccCCCcEEEEccCCcccchHhHHhhhhc
Q psy6348 175 LKKCKKGVRVVNVARGGIVDENALLDSLKC 204 (333)
Q Consensus 175 ~~~mk~gailIN~aRg~~vd~~aL~~aL~~ 204 (333)
++.+++|.++|+++...+-+.+.+.+.+.+
T Consensus 81 ~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~ 110 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTIDPAVSKELAKEVEK 110 (296)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 567899999999888887777777777654
No 83
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.16 E-value=3.4e-11 Score=119.87 Aligned_cols=105 Identities=14% Similarity=0.126 Sum_probs=82.0
Q ss_pred hcCcccccCCCccccCC-CEEEEEecChHHHHHHHHHhhC------CCEEEEEcCCC--CHHHHHhcCccc-----cChh
Q psy6348 82 KEGKWDRKLYTGTELYG-KTLAVLGLGRIGREVALRMQAF------GMKVIGFDPMV--SVEDAAKLNIAS-----LGLE 147 (333)
Q Consensus 82 ~~g~w~~~~~~g~~l~g-ktvGIIGlG~IG~~vA~~l~~~------G~~V~~~d~~~--~~~~a~~~gv~~-----~~l~ 147 (333)
+.++|.+. .....|+| |||||||+|.||.++|+.|+.. |++|++.++.. +.+.+.+.|+.. .+++
T Consensus 38 ~~~~w~~~-~~~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~a 116 (525)
T 3fr7_A 38 RGGRNLFP-LLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIW 116 (525)
T ss_dssp ECCGGGGG-GHHHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHH
T ss_pred eccccccc-cChHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHH
Confidence 34556532 12367899 9999999999999999999988 99988655432 556777888875 5899
Q ss_pred hhccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCC
Q psy6348 148 DIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 148 ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg 190 (333)
|++++||+|++++|..... .++. +.++.||+|++ |-.+.|
T Consensus 117 EAa~~ADVVILaVP~~~~~-eVl~-eI~p~LK~GaI-Ls~AaG 156 (525)
T 3fr7_A 117 ETVSGSDLVLLLISDAAQA-DNYE-KIFSHMKPNSI-LGLSHG 156 (525)
T ss_dssp HHHHHCSEEEECSCHHHHH-HHHH-HHHHHSCTTCE-EEESSS
T ss_pred HHHhcCCEEEECCChHHHH-HHHH-HHHHhcCCCCe-EEEeCC
Confidence 9999999999999976553 4664 78899999998 466666
No 84
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.15 E-value=4.2e-11 Score=111.32 Aligned_cols=151 Identities=20% Similarity=0.230 Sum_probs=107.0
Q ss_pred ceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchh
Q psy6348 2 YDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQS 80 (333)
Q Consensus 2 ~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~ 80 (333)
++++.|. .+..+++++.++ +.-.++...++|.++. +.|- ..|.|+... +++.++.|
T Consensus 66 ~~G~nvt--iP~k~~i~~~ld~l~~~A~~~gavnti~~----~~g~----~~g~nTd~~-----G~~~~l~~-------- 122 (275)
T 2hk9_A 66 VKGINVT--VPFKEEIIPLLDYVEDTAKEIGAVNTVKF----ENGK----AYGYNTDWI-----GFLKSLKS-------- 122 (275)
T ss_dssp CCEEEEC--TTSTTTTGGGCSEECHHHHHHTCCCEEEE----ETTE----EEEECCHHH-----HHHHHHHH--------
T ss_pred CCEEEEC--ccCHHHHHHHHHHhhHHHHHhCCcceEEe----eCCE----EEeecCCHH-----HHHHHHHH--------
Confidence 4566664 466777888777 8878787888888764 3442 235566433 45555433
Q ss_pred hhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH--HHHHhcCcccc-ChhhhccCCCEEE
Q psy6348 81 LKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV--EDAAKLNIASL-GLEDIWPLADYIT 157 (333)
Q Consensus 81 ~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~gv~~~-~l~ell~~aDvV~ 157 (333)
.+.++.|++++|||+|.+|+.+|..|...|++|++||++... +.+++.|+... +++++++++|+|+
T Consensus 123 -----------~~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi 191 (275)
T 2hk9_A 123 -----------LIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIV 191 (275)
T ss_dssp -----------HCTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEE
T ss_pred -----------hCCCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEE
Confidence 134578899999999999999999999999999999996522 12223455544 7888999999999
Q ss_pred EecCCchh--hHhhccHHHHhccCCCcEEEEccC
Q psy6348 158 VHTPLIPQ--TKNLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 158 l~~P~t~~--t~~li~~~~~~~mk~gailIN~aR 189 (333)
+++|.... +...+. ++.+++|.++++++.
T Consensus 192 ~atp~~~~~~~~~~i~---~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 192 NTTSVGLKDEDPEIFN---YDLIKKDHVVVDIIY 222 (275)
T ss_dssp ECSSTTSSTTCCCSSC---GGGCCTTSEEEESSS
T ss_pred EeCCCCCCCCCCCCCC---HHHcCCCCEEEEcCC
Confidence 99996542 222343 456899999999987
No 85
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.15 E-value=7.8e-10 Score=110.11 Aligned_cols=152 Identities=14% Similarity=0.118 Sum_probs=102.9
Q ss_pred CCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCC----Cc-cccCCCEEEEEecChHHHHHHHHHhhCCCEEEE
Q psy6348 52 PGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLY----TG-TELYGKTLAVLGLGRIGREVALRMQAFGMKVIG 126 (333)
Q Consensus 52 p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~----~g-~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~ 126 (333)
.|-|-..+.|.+.+.+|...|. .++|..... .. ....=++|||||+|.||..+|..+...|++|++
T Consensus 12 ~~~~~~~~~~~~~~~~~~a~~~---------~~~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l 82 (460)
T 3k6j_A 12 TGENLYFQGSEVRSYLMEAHSL---------AGQWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETFL 82 (460)
T ss_dssp TSGGGGGCBCHHHHHHHHTTCC---------TTSCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred cccchhhhhHHHHHHHHhHHHh---------hccccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 4556667788888888873332 234543211 11 112237999999999999999999999999999
Q ss_pred EcCCCCHH---------HHHhcCc-------------cc-cChhhhccCCCEEEEecCCchhhHhhccHHHHhccCCCcE
Q psy6348 127 FDPMVSVE---------DAAKLNI-------------AS-LGLEDIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVR 183 (333)
Q Consensus 127 ~d~~~~~~---------~a~~~gv-------------~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gai 183 (333)
||+..... ...+.|. .. .+++ .+++||+|+.++|...+.+..+-++..+.++++++
T Consensus 83 ~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aI 161 (460)
T 3k6j_A 83 VVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENICKSTCI 161 (460)
T ss_dssp ECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCE
T ss_pred EECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCE
Confidence 99965311 1122232 12 2564 68999999999998777766665777788999999
Q ss_pred EEEccCCcccchHhHHhhhhcCCceEEEeccCC
Q psy6348 184 VVNVARGGIVDENALLDSLKCGHCGGAALDVFC 216 (333)
Q Consensus 184 lIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~ 216 (333)
|++.+.+ +....+.+.+.. .-+..++..|.
T Consensus 162 lasnTSs--l~i~~ia~~~~~-p~r~iG~Hffn 191 (460)
T 3k6j_A 162 FGTNTSS--LDLNEISSVLRD-PSNLVGIHFFN 191 (460)
T ss_dssp EEECCSS--SCHHHHHTTSSS-GGGEEEEECCS
T ss_pred EEecCCC--hhHHHHHHhccC-CcceEEEEecc
Confidence 9755444 344667777654 23457787777
No 86
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.15 E-value=1e-10 Score=117.14 Aligned_cols=112 Identities=15% Similarity=0.163 Sum_probs=90.8
Q ss_pred cCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhc----Ccccc-ChhhhccC---CCEEEEecCCchhh
Q psy6348 96 LYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKL----NIASL-GLEDIWPL---ADYITVHTPLIPQT 166 (333)
Q Consensus 96 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~----gv~~~-~l~ell~~---aDvV~l~~P~t~~t 166 (333)
+..++|||||+|.||+.+|.+|...|++|.+||++... +...+. |+... +++++++. +|+|++++|....+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 92 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGT 92 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHH
Confidence 45678999999999999999999999999999997532 223322 66544 78888876 99999999987788
Q ss_pred HhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 167 KNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 167 ~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
+.++ ++..+.+++|.++||++.|...+...+.+.+.+..+.
T Consensus 93 ~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~ 133 (480)
T 2zyd_A 93 DAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFN 133 (480)
T ss_dssp HHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Confidence 8888 4667889999999999999988888898888775443
No 87
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.13 E-value=3.4e-10 Score=106.55 Aligned_cols=113 Identities=17% Similarity=0.120 Sum_probs=81.5
Q ss_pred cCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhc-------Ccccc-ChhhhccCCCEEEEecCCchhh
Q psy6348 96 LYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKL-------NIASL-GLEDIWPLADYITVHTPLIPQT 166 (333)
Q Consensus 96 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~-------gv~~~-~l~ell~~aDvV~l~~P~t~~t 166 (333)
-+-|+|||||+|.||..+|..+. .|++|++||++.. .+.+.+. +++.. ++++ +++||+|+.++|...+.
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~v 87 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNT 87 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHH
Confidence 35689999999999999999999 9999999999762 2333333 44443 6766 89999999999998887
Q ss_pred HhhccHHHHhccCCCcEEE-EccCCcccchHhHHhhhhcCCceEEEeccCC
Q psy6348 167 KNLINAEVLKKCKKGVRVV-NVARGGIVDENALLDSLKCGHCGGAALDVFC 216 (333)
Q Consensus 167 ~~li~~~~~~~mk~gailI-N~aRg~~vd~~aL~~aL~~g~i~gaalDV~~ 216 (333)
+..+-.+ ++.+ ++++++ |+|.-.+ ..+.++++ ...+..++..|.
T Consensus 88 k~~l~~~-l~~~-~~~IlasntSti~~---~~~a~~~~-~~~r~~G~Hf~~ 132 (293)
T 1zej_A 88 KVEVLRE-VERL-TNAPLCSNTSVISV---DDIAERLD-SPSRFLGVHWMN 132 (293)
T ss_dssp HHHHHHH-HHTT-CCSCEEECCSSSCH---HHHHTTSS-CGGGEEEEEECS
T ss_pred HHHHHHH-HhcC-CCCEEEEECCCcCH---HHHHHHhh-cccceEeEEecC
Confidence 7766554 5666 998885 7777544 45555443 223345666666
No 88
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.12 E-value=2.1e-10 Score=115.46 Aligned_cols=109 Identities=17% Similarity=0.249 Sum_probs=90.4
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHh-----cCcccc-ChhhhccC---CCEEEEecCCchhhH
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAK-----LNIASL-GLEDIWPL---ADYITVHTPLIPQTK 167 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-----~gv~~~-~l~ell~~---aDvV~l~~P~t~~t~ 167 (333)
.++|||||+|.||+.+|..|...|++|.+||++... +...+ .|+... +++++++. +|+|++++|....++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 358999999999999999999999999999998733 33333 466544 78888876 999999999777888
Q ss_pred hhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCc
Q psy6348 168 NLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHC 207 (333)
Q Consensus 168 ~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i 207 (333)
.++ ++..+.+++|.++|+++.+...+...+.+.+.+..+
T Consensus 90 ~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~ 128 (497)
T 2p4q_A 90 ALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGI 128 (497)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred HHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCC
Confidence 888 567788999999999999998888889888876544
No 89
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.11 E-value=1.4e-10 Score=109.21 Aligned_cols=109 Identities=15% Similarity=0.142 Sum_probs=88.5
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhccH--HH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLINA--EV 174 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~--~~ 174 (333)
++|||||+|.||+.+|+.|...|++|++||+... .+...+.|+... +++++++++|+|++++|....++.++.. ..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~ 110 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGV 110 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhH
Confidence 6899999999999999999999999999999763 344455676554 7888899999999999976777776643 24
Q ss_pred HhccCCCcEEEEccCCcccchHhHHhhhhcCCc
Q psy6348 175 LKKCKKGVRVVNVARGGIVDENALLDSLKCGHC 207 (333)
Q Consensus 175 ~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i 207 (333)
++.++++.++|+++++.....+.+.+.+....+
T Consensus 111 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~ 143 (316)
T 2uyy_A 111 LQGIRPGKCYVDMSTVDADTVTELAQVIVSRGG 143 (316)
T ss_dssp GGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 567899999999999888788888888865433
No 90
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.11 E-value=1.5e-10 Score=105.97 Aligned_cols=102 Identities=12% Similarity=0.065 Sum_probs=81.9
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH---HHHHhcCccccChhhhccCCCEEEEecCCchhhHhhccHHHH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV---EDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINAEVL 175 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~---~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~ 175 (333)
++|||||+|.||+.+|+.|...|++|++||+.... +...+.|+. .+++++++++|+|++++|.....+.+ .+..
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~aDvvi~~v~~~~~~~~~--~~~~ 77 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT-ETSEEDVYSCPVVISAVTPGVALGAA--RRAG 77 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE-ECCHHHHHTSSEEEECSCGGGHHHHH--HHHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc-CCHHHHHhcCCEEEEECCCHHHHHHH--HHHH
Confidence 37999999999999999999999999999884322 233445776 67888999999999999976555554 4566
Q ss_pred hccCCCcEEEEccCCcccchHhHHhhhhcC
Q psy6348 176 KKCKKGVRVVNVARGGIVDENALLDSLKCG 205 (333)
Q Consensus 176 ~~mk~gailIN~aRg~~vd~~aL~~aL~~g 205 (333)
+.+++ ++|+++.+...+.+.+.+.+...
T Consensus 78 ~~~~~--~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 78 RHVRG--IYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp TTCCS--EEEECSCCCHHHHHHHHHHCSSS
T ss_pred HhcCc--EEEEccCCCHHHHHHHHHHHhhC
Confidence 67776 99999988888888888888653
No 91
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.68 E-value=9.3e-12 Score=110.87 Aligned_cols=94 Identities=18% Similarity=0.192 Sum_probs=76.1
Q ss_pred cCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhccHHHH
Q psy6348 96 LYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINAEVL 175 (333)
Q Consensus 96 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~ 175 (333)
+.+++|||||+|+||+.+|+.|...|++|++|||....+.....|+...+++++++++|+|++++|.. .++.++ + +
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~aDvVilav~~~-~~~~v~--~-l 92 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVLCYSEAASRSDVIVLAVHRE-HYDFLA--E-L 92 (201)
Confidence 67789999999999999999999999999999987643333334665557889999999999999964 567666 2 4
Q ss_pred hccCCCcEEEEccCCccc
Q psy6348 176 KKCKKGVRVVNVARGGIV 193 (333)
Q Consensus 176 ~~mk~gailIN~aRg~~v 193 (333)
..+++++++||+++|-..
T Consensus 93 ~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 93 ADSLKGRVLIDVSNNQKM 110 (201)
Confidence 557789999999999753
No 92
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.09 E-value=7.8e-10 Score=105.25 Aligned_cols=116 Identities=17% Similarity=0.098 Sum_probs=85.3
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHH-----------hcC--------------ccc-cChhhhc
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAA-----------KLN--------------IAS-LGLEDIW 150 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~-----------~~g--------------v~~-~~l~ell 150 (333)
-++|||||+|.||.++|..+...|++|++||+.... +.+. +.| +.. .++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 468999999999999999999999999999997532 2221 123 222 3788999
Q ss_pred cCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCC
Q psy6348 151 PLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFC 216 (333)
Q Consensus 151 ~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~ 216 (333)
++||+|+.++|...+.+.-+-++..+.++++++|++.+.+ +....+.+.+.. .-+..+...|.
T Consensus 86 ~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~--i~~~~la~~~~~-~~r~ig~Hp~~ 148 (319)
T 2dpo_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVN 148 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECS
T ss_pred hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC--hHHHHHHHhcCC-CCCeEEeecCC
Confidence 9999999999987766665556777889999999877665 445677777753 22335555554
No 93
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.06 E-value=2.4e-10 Score=104.81 Aligned_cols=108 Identities=12% Similarity=0.166 Sum_probs=80.6
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCCE-EEEEcCCCCH-HHH-HhcCcccc-ChhhhccCCCEEEEecCCchhhHh
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGMK-VIGFDPMVSV-EDA-AKLNIASL-GLEDIWPLADYITVHTPLIPQTKN 168 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~-V~~~d~~~~~-~~a-~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~ 168 (333)
..++.+++|||||+|.||+.+|+.+...|++ |.+||+.... +.. +..|+... +++++++++|+|++++|.. ....
T Consensus 5 ~~~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~-~~~~ 83 (266)
T 3d1l_A 5 KRSIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS-AFAE 83 (266)
T ss_dssp --CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHH-HHHH
T ss_pred hcCCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHH-HHHH
Confidence 3456678999999999999999999988998 8999986522 222 33476544 7889999999999999954 4455
Q ss_pred hccHHHHhccCCCcEEEEccCCcccchHhHHhhhhc
Q psy6348 169 LINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKC 204 (333)
Q Consensus 169 li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~ 204 (333)
++ ++..+.+++++++|+++.|-..+. +.+.+..
T Consensus 84 v~-~~l~~~~~~~~ivv~~s~~~~~~~--l~~~~~~ 116 (266)
T 3d1l_A 84 LL-QGIVEGKREEALMVHTAGSIPMNV--WEGHVPH 116 (266)
T ss_dssp HH-HHHHTTCCTTCEEEECCTTSCGGG--STTTCSS
T ss_pred HH-HHHHhhcCCCcEEEECCCCCchHH--HHHHHHh
Confidence 55 455567889999999999876543 5555543
No 94
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.06 E-value=4.3e-10 Score=112.40 Aligned_cols=109 Identities=18% Similarity=0.183 Sum_probs=88.4
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhc----Ccccc-ChhhhccC---CCEEEEecCCchhhHhh
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKL----NIASL-GLEDIWPL---ADYITVHTPLIPQTKNL 169 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~----gv~~~-~l~ell~~---aDvV~l~~P~t~~t~~l 169 (333)
++|||||+|.||+.+|..|...|++|.+||+.... +...+. |+... +++++++. +|+|++++|....++.+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 57999999999999999999999999999997532 223222 55543 78888776 99999999977777877
Q ss_pred ccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 170 INAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 170 i~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
+ ++..+.+++|.++|+++.|...+...+.+.+.+..+.
T Consensus 86 l-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~ 123 (474)
T 2iz1_A 86 I-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGIN 123 (474)
T ss_dssp H-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCE
T ss_pred H-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCe
Confidence 7 4566789999999999999888888898888765444
No 95
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.05 E-value=4.2e-10 Score=112.71 Aligned_cols=109 Identities=19% Similarity=0.232 Sum_probs=88.3
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHh-----cCcccc-Chhhhc---cCCCEEEEecCCchhhHh
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAK-----LNIASL-GLEDIW---PLADYITVHTPLIPQTKN 168 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-----~gv~~~-~l~ell---~~aDvV~l~~P~t~~t~~ 168 (333)
++|||||+|.||+.+|..|...|++|.+||+.... +...+ .|+... ++++++ +++|+|++++|....++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 47999999999999999999999999999997633 33333 455443 788886 489999999997767888
Q ss_pred hccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 169 LINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 169 li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
++ .+..+.+++|.+||+++.|...+...+.+.+.+..+.
T Consensus 83 vl-~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~ 121 (482)
T 2pgd_A 83 FI-EKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGIL 121 (482)
T ss_dssp HH-HHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 77 4566789999999999999888888888888765443
No 96
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.00 E-value=6e-10 Score=111.08 Aligned_cols=136 Identities=13% Similarity=0.118 Sum_probs=94.2
Q ss_pred CEEEEEecChHHHHHHHHHhhC--CCEEEEEcCCCCH-HHHH---------------h----cCccc-cChhhhccCCCE
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF--GMKVIGFDPMVSV-EDAA---------------K----LNIAS-LGLEDIWPLADY 155 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~-~~a~---------------~----~gv~~-~~l~ell~~aDv 155 (333)
++|+|||+|.||..+|..|... |++|++||+.... +... . .++.. .++++.+++||+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 5899999999999999999887 8999999986522 1111 0 13333 267788899999
Q ss_pred EEEecCCchhhHh-----------hc--cHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEec---cCCCCC
Q psy6348 156 ITVHTPLIPQTKN-----------LI--NAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALD---VFCEEP 219 (333)
Q Consensus 156 V~l~~P~t~~t~~-----------li--~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalD---V~~~EP 219 (333)
|++|+|......+ +. .++..+.|++|+++|++++..+-..+.+.+.+++.... .+| ++.+|+
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~--~~d~~V~~~Pe~ 163 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKP--NLNLQVLSNPEF 163 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCT--TCEEEEEECCCC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCC--CCCeEEEeCHHH
Confidence 9999985443322 11 23455678999999999998888888898888775421 233 355665
Q ss_pred CCCc-cchhhcCCCcEEE
Q psy6348 220 PKSE-QTFELIKHPKVIV 236 (333)
Q Consensus 220 ~~~~-~~~~L~~~pnvi~ 236 (333)
.... ..+.+...+++++
T Consensus 164 ~~~G~~~~d~~~~~rivv 181 (467)
T 2q3e_A 164 LAEGTAIKDLKNPDRVLI 181 (467)
T ss_dssp CCTTSHHHHHHSCSCEEE
T ss_pred hhcccchhhccCCCEEEE
Confidence 4321 1234667777764
No 97
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=99.00 E-value=6.3e-10 Score=107.73 Aligned_cols=107 Identities=16% Similarity=0.171 Sum_probs=85.9
Q ss_pred ccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH--HHHHhcCccccChhhhcc-CCCEEEEecCCchhhHhhcc
Q psy6348 95 ELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV--EDAAKLNIASLGLEDIWP-LADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 95 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~gv~~~~l~ell~-~aDvV~l~~P~t~~t~~li~ 171 (333)
+|.|||++|+|+|+||+.+|++|.++|++|+++|+.... +.+++.|.+.++.++++. +||+++.|. +.++|+
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~ll~~~~DIvip~a-----~~~~I~ 244 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCA-----LGAVLN 244 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECS-----CSCCBS
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHHhccCCcEeeccc-----hHHHhC
Confidence 799999999999999999999999999999999986532 233445777778888876 899999874 567888
Q ss_pred HHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 172 AEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 172 ~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
.+.++.|+ ..++++.+++...+++ ..+.|+++.+.
T Consensus 245 ~~~~~~lg-~~iV~e~An~p~t~~e-a~~~L~~~Gi~ 279 (364)
T 1leh_A 245 DFTIPQLK-AKVIAGSADNQLKDPR-HGKYLHELGIV 279 (364)
T ss_dssp TTHHHHCC-CSEECCSCSCCBSSHH-HHHHHHHHTCE
T ss_pred HHHHHhCC-CcEEEeCCCCCcccHH-HHHHHHhCCCE
Confidence 88888884 5788999999887755 55677776663
No 98
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.99 E-value=8e-10 Score=102.65 Aligned_cols=92 Identities=14% Similarity=0.243 Sum_probs=74.6
Q ss_pred CEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhccHHHHh
Q psy6348 99 KTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINAEVLK 176 (333)
Q Consensus 99 ktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~ 176 (333)
++|+|||+ |.||+.+|+.|...|++|++||+... .+...+.|+...++.+++++||+|++++|.. .+..++ ++..+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~-~~~~v~-~~l~~ 89 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDN-IIEKVA-EDIVP 89 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHH-HHHHHH-HHHGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCch-HHHHHH-HHHHH
Confidence 58999999 99999999999999999999999652 2334446765567888999999999999954 355555 45566
Q ss_pred ccCCCcEEEEccCCcc
Q psy6348 177 KCKKGVRVVNVARGGI 192 (333)
Q Consensus 177 ~mk~gailIN~aRg~~ 192 (333)
.+++++++|+++.|..
T Consensus 90 ~l~~~~ivv~~s~~~~ 105 (286)
T 3c24_A 90 RVRPGTIVLILDAAAP 105 (286)
T ss_dssp GSCTTCEEEESCSHHH
T ss_pred hCCCCCEEEECCCCch
Confidence 7899999999888863
No 99
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=98.99 E-value=6.5e-10 Score=111.23 Aligned_cols=109 Identities=20% Similarity=0.232 Sum_probs=87.2
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHH-hcC-------ccc-cChhhhcc---CCCEEEEecCCchh
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAA-KLN-------IAS-LGLEDIWP---LADYITVHTPLIPQ 165 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~-~~g-------v~~-~~l~ell~---~aDvV~l~~P~t~~ 165 (333)
++|||||+|.||+.+|..|...|++|.+||+.... +... +.| +.. .+++++++ ++|+|++++|....
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 37999999999999999999999999999996532 2222 235 433 37888876 59999999997777
Q ss_pred hHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 166 TKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 166 t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
++.++ ++..+.+++|.++|+++.|...+.+.+.+.+.+..+.
T Consensus 82 v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~ 123 (478)
T 1pgj_A 82 TDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLR 123 (478)
T ss_dssp HHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCE
T ss_pred HHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCe
Confidence 78777 4666789999999999999888888888888875544
No 100
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.95 E-value=2.8e-09 Score=95.01 Aligned_cols=80 Identities=18% Similarity=0.302 Sum_probs=64.1
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhccHH
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINAE 173 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~ 173 (333)
.++.+++|+|||+|.||+.+|..|...|++|++||+... .+++||+|++++| ...++.++. +
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~----------------~~~~aD~vi~av~-~~~~~~v~~-~ 76 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ----------------ATTLGEIVIMAVP-YPALAALAK-Q 76 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC----------------CSSCCSEEEECSC-HHHHHHHHH-H
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH----------------HhccCCEEEEcCC-cHHHHHHHH-H
Confidence 468899999999999999999999999999999998643 5678999999999 667777664 4
Q ss_pred HHhccCCCcEEEEccCCcc
Q psy6348 174 VLKKCKKGVRVVNVARGGI 192 (333)
Q Consensus 174 ~~~~mk~gailIN~aRg~~ 192 (333)
..+.++ ++++|++++|--
T Consensus 77 l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 77 YATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp THHHHT-TSEEEECCCCBC
T ss_pred HHHhcC-CCEEEEECCCCC
Confidence 445677 999999999754
No 101
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.92 E-value=1.1e-09 Score=97.95 Aligned_cols=94 Identities=18% Similarity=0.116 Sum_probs=72.0
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhcCccccChhhhccCCCEEEEecCCchhhHhhccHHHH
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINAEVL 175 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~ 175 (333)
.+++|+|||+|.||+.+|+.|...|++|++||++... +...+.|+...+++++++++|+|++++|. .....++. +
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~DvVi~av~~-~~~~~v~~---l 102 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFR-EHYSSLCS---L 102 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEEEHHHHTTSCSEEEECSCG-GGSGGGGG---G
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCceecHHHHHhCCCEEEECCCh-HHHHHHHH---H
Confidence 4578999999999999999999999999999986422 22333366555788999999999999994 45556653 3
Q ss_pred hccCCCcEEEEccCCcccc
Q psy6348 176 KKCKKGVRVVNVARGGIVD 194 (333)
Q Consensus 176 ~~mk~gailIN~aRg~~vd 194 (333)
+.+.+++++|++++|...+
T Consensus 103 ~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 103 SDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp HHHHTTCEEEECCCCCHHH
T ss_pred HHhcCCCEEEEeCCCcccc
Confidence 3333899999999997654
No 102
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.91 E-value=2.3e-08 Score=93.57 Aligned_cols=115 Identities=17% Similarity=0.133 Sum_probs=79.1
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHH-----------hcC------------------ccc-cChh
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAA-----------KLN------------------IAS-LGLE 147 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~-----------~~g------------------v~~-~~l~ 147 (333)
++|+|||+|.||..+|..+...|++|++||+.... +.+. +.| +.. .+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 68999999999999999999999999999996522 2110 122 222 2677
Q ss_pred hhccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCC
Q psy6348 148 DIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFC 216 (333)
Q Consensus 148 ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~ 216 (333)
+.+++||+|++++|...+.+.-+-++..+.++++++++..+.+- ....+.+.+.... +-.+.+.+.
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i--~~~~l~~~~~~~~-~~~g~h~~~ 161 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSL--QITSIANATTRQD-RFAGLHFFN 161 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSS--CHHHHHTTSSCGG-GEEEEEECS
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCC--CHHHHHHhcCCcc-cEEEEecCC
Confidence 78999999999999766554444455666788999998655553 3346666664321 224555554
No 103
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.90 E-value=9.9e-09 Score=101.42 Aligned_cols=114 Identities=15% Similarity=0.173 Sum_probs=82.9
Q ss_pred CccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHh------------------cCcccc-Chhhhcc
Q psy6348 92 TGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAK------------------LNIASL-GLEDIWP 151 (333)
Q Consensus 92 ~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~------------------~gv~~~-~l~ell~ 151 (333)
.+++..-++|+|||+|.||..+|..|.. |++|++||+.... +...+ .++... ++++.++
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~ 108 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYR 108 (432)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHT
T ss_pred cccccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHh
Confidence 4567777899999999999999999988 9999999986532 22211 123333 6788999
Q ss_pred CCCEEEEecCCchh-------hHhhc--cHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCc
Q psy6348 152 LADYITVHTPLIPQ-------TKNLI--NAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHC 207 (333)
Q Consensus 152 ~aDvV~l~~P~t~~-------t~~li--~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i 207 (333)
+||+|++++|.... +..+. -+...+ +++|+++|+.|+-.+-..+.+.+.+.+..+
T Consensus 109 ~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v 172 (432)
T 3pid_A 109 NADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV 172 (432)
T ss_dssp TCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE
T ss_pred CCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE
Confidence 99999999996521 11222 245566 999999999999999889999998877544
No 104
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.85 E-value=2.8e-08 Score=95.84 Aligned_cols=181 Identities=16% Similarity=0.087 Sum_probs=112.1
Q ss_pred ceEEEEeCCCCCCHHHhcccC-cceEEEcccCcCccChhhHhhCCcEEEEC---CCCC-----chHHHHHH--HHHHHHH
Q psy6348 2 YDGLVVRSDTKVTAEVLQASN-LQVVGRAGTGVDNIDLTAATRKGVLVLNA---PGGN-----FISACELT--CSLISAL 70 (333)
Q Consensus 2 ~daliv~s~~~v~~~~l~~~~-Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~---p~~n-----~~avAE~~--l~l~l~~ 70 (333)
+|.| +....+...+.....+ +..+......++.-.++++.++||..+|. |.-. -.+++|.+ ++.++++
T Consensus 67 ad~i-~~vksP~~~~~~~~~~g~~~~~y~~~~~~~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~gA 145 (361)
T 1pjc_A 67 REMV-VKVKEPLPAEYDLMQKDQLLFTYLHLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGA 145 (361)
T ss_dssp SSEE-ECSSCCCGGGGGGCCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHHH
T ss_pred CCeE-EEECCCCHHHHHhhcCCCEEEEEeccccCHHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHHHH
Confidence 5664 4444455444332223 55555555555554567788899998875 4311 12333333 3555554
Q ss_pred hcCCCccchhhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhcCccc------
Q psy6348 71 SRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKLNIAS------ 143 (333)
Q Consensus 71 ~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~gv~~------ 143 (333)
.. +...... .|-+-. .. ..+.++++.|+|.|.+|+.+++.++.+|++|+++|++... +.+++.+...
T Consensus 146 ~n-t~~~~~g--~G~~l~-~l--~~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~ 219 (361)
T 1pjc_A 146 RF-LERQQGG--RGVLLG-GV--PGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYS 219 (361)
T ss_dssp HH-TSGGGTS--CCCCTT-CB--TTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEEC
T ss_pred HH-HhhccCC--Cceecc-CC--CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeC
Confidence 33 2221110 011101 00 2477899999999999999999999999999999997532 3333333221
Q ss_pred --cChhhhccCCCEEEEecCCch-hhHhhccHHHHhccCCCcEEEEccC
Q psy6348 144 --LGLEDIWPLADYITVHTPLIP-QTKNLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 144 --~~l~ell~~aDvV~l~~P~t~-~t~~li~~~~~~~mk~gailIN~aR 189 (333)
.++.+.++++|+|+.+++... .+..++.++.++.|++|.+++|++-
T Consensus 220 ~~~~~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 220 NSAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CHHHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CHHHHHHHHcCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 145567789999999987532 2334567888899999999999974
No 105
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.84 E-value=1.3e-08 Score=94.63 Aligned_cols=103 Identities=14% Similarity=0.124 Sum_probs=79.5
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCC---EEEEEcCCCCH-HHHHh-cCcccc-ChhhhccCCCEEEEecCCchhhHhhcc
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGM---KVIGFDPMVSV-EDAAK-LNIASL-GLEDIWPLADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~---~V~~~d~~~~~-~~a~~-~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~ 171 (333)
.++|||||+|+||+.+|+.+...|+ +|++||++... +...+ +|+... +..+++++||+|++++|. .....++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl- 80 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVC- 80 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHH-
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHH-
Confidence 4689999999999999999999998 89999997732 33333 487665 788999999999999983 4445554
Q ss_pred HHHHhc-cCCCcEEEEccCCcccchHhHHhhhhc
Q psy6348 172 AEVLKK-CKKGVRVVNVARGGIVDENALLDSLKC 204 (333)
Q Consensus 172 ~~~~~~-mk~gailIN~aRg~~vd~~aL~~aL~~ 204 (333)
++.... ++++.++|+++-|- ..+.|.+.+..
T Consensus 81 ~~l~~~~l~~~~iiiS~~agi--~~~~l~~~l~~ 112 (280)
T 3tri_A 81 EELKDILSETKILVISLAVGV--TTPLIEKWLGK 112 (280)
T ss_dssp HHHHHHHHTTTCEEEECCTTC--CHHHHHHHHTC
T ss_pred HHHHhhccCCCeEEEEecCCC--CHHHHHHHcCC
Confidence 344455 78888999887664 45677777765
No 106
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.82 E-value=5.6e-09 Score=98.93 Aligned_cols=104 Identities=15% Similarity=0.182 Sum_probs=80.4
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCC----CEEEEEcCCCC---HHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHh
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFG----MKVIGFDPMVS---VEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKN 168 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G----~~V~~~d~~~~---~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~ 168 (333)
..++|||||+|.||..+|..|...| .+|++||+... .+...+.|+... +..+++++||+|++++| ......
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~~ 99 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIPF 99 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHHH
Confidence 3468999999999999999999989 79999999764 334456687665 68888999999999999 456666
Q ss_pred hccHHHHhccCCCcEEEEccCCcccchHhHHhhhhc
Q psy6348 169 LINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKC 204 (333)
Q Consensus 169 li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~ 204 (333)
++ .+....++++.++|+++.|-- .+.+.+.+.+
T Consensus 100 vl-~~l~~~l~~~~ivvs~s~gi~--~~~l~~~l~~ 132 (322)
T 2izz_A 100 IL-DEIGADIEDRHIVVSCAAGVT--ISSIEKKLSA 132 (322)
T ss_dssp HH-HHHGGGCCTTCEEEECCTTCC--HHHHHHHHHT
T ss_pred HH-HHHHhhcCCCCEEEEeCCCCC--HHHHHHHHhh
Confidence 65 345567889999999977643 3456666654
No 107
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.82 E-value=4.5e-09 Score=87.73 Aligned_cols=88 Identities=15% Similarity=0.154 Sum_probs=69.2
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH--HHHHhcCccc---cChhhhccCCCEEEEecCCchhhHhhccH
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV--EDAAKLNIAS---LGLEDIWPLADYITVHTPLIPQTKNLINA 172 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~gv~~---~~l~ell~~aDvV~l~~P~t~~t~~li~~ 172 (333)
|++++|||.|.||+.+++.|+..|++|.+||+.... +.+++++... .+++++++++|+|+.++|.. ..++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~---~~~~~~ 97 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSK---TPIVEE 97 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCS---SCSBCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCC---CcEeeH
Confidence 899999999999999999999999999999997532 2344556542 36888999999999999965 234443
Q ss_pred HHHhccCCCcEEEEccCCc
Q psy6348 173 EVLKKCKKGVRVVNVARGG 191 (333)
Q Consensus 173 ~~~~~mk~gailIN~aRg~ 191 (333)
+.+++|.++++++...
T Consensus 98 ---~~l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 98 ---RSLMPGKLFIDLGNPP 113 (144)
T ss_dssp ---GGCCTTCEEEECCSSC
T ss_pred ---HHcCCCCEEEEccCCc
Confidence 4578899999987653
No 108
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.81 E-value=4.2e-09 Score=95.83 Aligned_cols=102 Identities=17% Similarity=0.226 Sum_probs=76.3
Q ss_pred CEEEEEecChHHHHHHHHHhhCCC----EEEEEcCCCCH-HHH-HhcCcccc-ChhhhccCCCEEEEecCCchhhHhhcc
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGM----KVIGFDPMVSV-EDA-AKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~----~V~~~d~~~~~-~~a-~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~ 171 (333)
++|||||+|+||+.+|+.|...|+ +|++||++... +.. ++.|+... +.+++++++|+|++++|. .....++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~-~~~~~v~- 80 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKP-DLYASII- 80 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCT-TTHHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCH-HHHHHHH-
Confidence 589999999999999999999998 99999997532 233 34577654 788999999999999973 4445555
Q ss_pred HHHHhccCCCcEEEEccCCcccchHhHHhhhhc
Q psy6348 172 AEVLKKCKKGVRVVNVARGGIVDENALLDSLKC 204 (333)
Q Consensus 172 ~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~ 204 (333)
++....++++.++|++..|- ..+.+.+.+..
T Consensus 81 ~~l~~~l~~~~~vvs~~~gi--~~~~l~~~~~~ 111 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTIAAGK--SIESTENAFNK 111 (247)
T ss_dssp ---CCSSCTTCEEEECSCCS--CHHHHHHHHCS
T ss_pred HHHHhhcCCCCEEEEecCCC--CHHHHHHHhCC
Confidence 45556788999999776653 34566666654
No 109
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.79 E-value=1.2e-08 Score=92.94 Aligned_cols=99 Identities=18% Similarity=0.192 Sum_probs=73.2
Q ss_pred CEEEEEecChHHHHHHHHHhhCC-CEEEEEcCCCCH-HHHH-hcCcccc-ChhhhccCCCEEEEecCCchhhHhhccHHH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFG-MKVIGFDPMVSV-EDAA-KLNIASL-GLEDIWPLADYITVHTPLIPQTKNLINAEV 174 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G-~~V~~~d~~~~~-~~a~-~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~~~ 174 (333)
++|||||+|.||+.+|..|...| ++|.+||++... +... ..|+... ++++++ ++|+|++++| ......++. .
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~~--~ 76 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAACK--N 76 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHHT--T
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHHH--H
Confidence 47999999999999999999889 999999997522 2233 3477654 677888 9999999999 555555543 1
Q ss_pred HhccCCCcEEEEccCCcccchHhHHhhhhcC
Q psy6348 175 LKKCKKGVRVVNVARGGIVDENALLDSLKCG 205 (333)
Q Consensus 175 ~~~mk~gailIN~aRg~~vd~~aL~~aL~~g 205 (333)
+.. + +.++|+++.|--. +.+.+.+..+
T Consensus 77 l~~-~-~~ivv~~~~g~~~--~~l~~~~~~~ 103 (263)
T 1yqg_A 77 IRT-N-GALVLSVAAGLSV--GTLSRYLGGT 103 (263)
T ss_dssp CCC-T-TCEEEECCTTCCH--HHHHHHTTSC
T ss_pred hcc-C-CCEEEEecCCCCH--HHHHHHcCCC
Confidence 122 4 8999999655433 6777777664
No 110
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.78 E-value=3.2e-08 Score=98.23 Aligned_cols=105 Identities=14% Similarity=0.092 Sum_probs=80.7
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhc-------------------C-ccc-cChhhhccCCCEE
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKL-------------------N-IAS-LGLEDIWPLADYI 156 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~-------------------g-v~~-~~l~ell~~aDvV 156 (333)
-+++|||+|.||..+|..|...|++|++||+.... +...+. | +.. .++.+.+++||+|
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDvv 88 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADAV 88 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSEE
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCEE
Confidence 48999999999999999999999999999997743 222221 1 233 2678899999999
Q ss_pred EEecCCch----------hhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhc
Q psy6348 157 TVHTPLIP----------QTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKC 204 (333)
Q Consensus 157 ~l~~P~t~----------~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~ 204 (333)
++|+|... ..+..+ +...+.+++|.++|+.|.-.+-..+.+.+.+.+
T Consensus 89 ii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e 145 (446)
T 4a7p_A 89 FIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAE 145 (446)
T ss_dssp EECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 99988443 133333 566788999999999998777777777777765
No 111
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.78 E-value=1.5e-08 Score=92.34 Aligned_cols=99 Identities=12% Similarity=0.163 Sum_probs=74.8
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHH-HhcCcccc-ChhhhccCCCEEEEecCCchhhHhhccHHHH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDA-AKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLINAEVL 175 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a-~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~~~~ 175 (333)
++|||||+|.||+.+++.|...|.+|.+||++... +.. ++.|+... +++++++++|+|++++| ...... .+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~~~-----v~ 77 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFET-----VL 77 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHHH-----HH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhHHH-----HH
Confidence 58999999999999999999999999999997532 222 23476654 78899999999999999 444433 34
Q ss_pred hccCCCcEEEEccCCcccchHhHHhhhhcC
Q psy6348 176 KKCKKGVRVVNVARGGIVDENALLDSLKCG 205 (333)
Q Consensus 176 ~~mk~gailIN~aRg~~vd~~aL~~aL~~g 205 (333)
..+++|.++|++..|-- .+.+.+.+..+
T Consensus 78 ~~l~~~~~vv~~~~~~~--~~~l~~~~~~~ 105 (259)
T 2ahr_A 78 KPLHFKQPIISMAAGIS--LQRLATFVGQD 105 (259)
T ss_dssp TTSCCCSCEEECCTTCC--HHHHHHHHCTT
T ss_pred HHhccCCEEEEeCCCCC--HHHHHHhcCCC
Confidence 45678999999976643 34566666654
No 112
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.76 E-value=4.1e-08 Score=98.34 Aligned_cols=117 Identities=21% Similarity=0.251 Sum_probs=83.0
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHh-----------cCc-------------ccc-Chhhhcc
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAK-----------LNI-------------ASL-GLEDIWP 151 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-----------~gv-------------~~~-~l~ell~ 151 (333)
-++|||||+|.||..+|..+...|++|++||+.... +.+.+ .|. ... +++ .++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-Hhc
Confidence 368999999999999999999999999999997522 22211 221 122 454 688
Q ss_pred CCCEEEEecCCchhhHhhccHHHHhccCCCcEEE-EccCCcccchHhHHhhhhcCCceEEEeccCCCCC
Q psy6348 152 LADYITVHTPLIPQTKNLINAEVLKKCKKGVRVV-NVARGGIVDENALLDSLKCGHCGGAALDVFCEEP 219 (333)
Q Consensus 152 ~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailI-N~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP 219 (333)
+||+|+.++|...+.+.-+-++..+.++++++|+ |+|.-.+ ..+.+.+.. .-+..++..|.+-|
T Consensus 84 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i---~~ia~~~~~-p~~~ig~hf~~Pa~ 148 (483)
T 3mog_A 84 AADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISI---TAIAAEIKN-PERVAGLHFFNPAP 148 (483)
T ss_dssp GCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCH---HHHTTTSSS-GGGEEEEEECSSTT
T ss_pred CCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCH---HHHHHHccC-ccceEEeeecChhh
Confidence 9999999999877766555566777899999995 6665433 466666643 23446777776443
No 113
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.75 E-value=2e-08 Score=99.08 Aligned_cols=105 Identities=15% Similarity=0.128 Sum_probs=79.0
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHh-------------------cC-cccc-ChhhhccCCCEE
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAK-------------------LN-IASL-GLEDIWPLADYI 156 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-------------------~g-v~~~-~l~ell~~aDvV 156 (333)
++|+|||+|.||..+|..|...|++|++||+.... +...+ .| +... ++++.+++||+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 37999999999999999999999999999986522 22222 22 3222 677888999999
Q ss_pred EEecCCchh---------hHhhccHHHHhccCC---CcEEEEccCCcccc-hHhHHhhhhc
Q psy6348 157 TVHTPLIPQ---------TKNLINAEVLKKCKK---GVRVVNVARGGIVD-ENALLDSLKC 204 (333)
Q Consensus 157 ~l~~P~t~~---------t~~li~~~~~~~mk~---gailIN~aRg~~vd-~~aL~~aL~~ 204 (333)
++|+|.... .+..+ ++..+.+++ +.++|+.+...+-. .+.+.+.+++
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVC-REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred EEEcCCCcccCCCcchHHHHHHH-HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 999995443 44443 455567888 99999998877766 6777777765
No 114
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.73 E-value=3.5e-08 Score=97.99 Aligned_cols=105 Identities=15% Similarity=0.148 Sum_probs=79.5
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHh-------------------cC-ccc-cChhhhccCCCEE
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAK-------------------LN-IAS-LGLEDIWPLADYI 156 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-------------------~g-v~~-~~l~ell~~aDvV 156 (333)
++|+|||+|.||..+|..|...|++|++||+.... +...+ .+ +.. .++++++++||+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 58999999999999999999999999999996532 22222 11 222 2678889999999
Q ss_pred EEecCCch---------hhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhc
Q psy6348 157 TVHTPLIP---------QTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKC 204 (333)
Q Consensus 157 ~l~~P~t~---------~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~ 204 (333)
++|+|... ..+..+ +...+.+++|.++|+.+.-.+-..+.+.+.+++
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 99999543 344443 556677999999999998666666777777655
No 115
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.71 E-value=5.5e-08 Score=90.24 Aligned_cols=107 Identities=18% Similarity=0.205 Sum_probs=76.6
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCccc-------------cChhhhcc---CCCEEEEecC
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIAS-------------LGLEDIWP---LADYITVHTP 161 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~-------------~~l~ell~---~aDvV~l~~P 161 (333)
++|+|||+|.||+.+|..|...|++|++||+... .+...+.|... .+.+++.+ ++|+|++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 5899999999999999999999999999998652 23333445322 13345544 8999999999
Q ss_pred CchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 162 LIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 162 ~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
. ..+..++ ++..+.+++++++|+++.| +-..+.+.+.+...++.
T Consensus 84 ~-~~~~~v~-~~l~~~l~~~~~iv~~~~g-~~~~~~l~~~~~~~~vi 127 (316)
T 2ew2_A 84 A-QQLDAMF-KAIQPMITEKTYVLCLLNG-LGHEDVLEKYVPKENIL 127 (316)
T ss_dssp H-HHHHHHH-HHHGGGCCTTCEEEECCSS-SCTHHHHTTTSCGGGEE
T ss_pred c-ccHHHHH-HHHHHhcCCCCEEEEecCC-CCcHHHHHHHcCCccEE
Confidence 4 4555555 4455678899999999765 33346677777655444
No 116
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.70 E-value=2.6e-08 Score=94.12 Aligned_cols=109 Identities=17% Similarity=0.116 Sum_probs=78.4
Q ss_pred CCCEEEEEecChHHHHHHHHHhh-CCC-EEEEEcCCCCH--HHHHhcC--cccc-ChhhhccCCCEEEEecCCchhhHhh
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQA-FGM-KVIGFDPMVSV--EDAAKLN--IASL-GLEDIWPLADYITVHTPLIPQTKNL 169 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~-~G~-~V~~~d~~~~~--~~a~~~g--v~~~-~l~ell~~aDvV~l~~P~t~~t~~l 169 (333)
.++++||||+|.||+.+++.+.. +|+ +|.+||++... +.+++.+ +... +++++++++|+|++++|. ...+
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~---~~~v 210 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLA---TEPI 210 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCC---SSCC
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCC---CCcc
Confidence 46799999999999999998875 487 99999997532 2233345 5443 789999999999999994 3455
Q ss_pred ccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEecc
Q psy6348 170 INAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDV 214 (333)
Q Consensus 170 i~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV 214 (333)
+.. +.+++|.++++++....- ...+.+.+..... ..+|-
T Consensus 211 ~~~---~~l~~g~~vi~~g~~~p~-~~el~~~~~~~g~--~~vD~ 249 (312)
T 2i99_A 211 LFG---EWVKPGAHINAVGASRPD-WRELDDELMKEAV--LYVDS 249 (312)
T ss_dssp BCG---GGSCTTCEEEECCCCSTT-CCSBCHHHHHHSE--EEESC
T ss_pred cCH---HHcCCCcEEEeCCCCCCC-ceeccHHHHhcCE--EEECC
Confidence 544 568999999999877663 3555544443322 45663
No 117
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.66 E-value=3.6e-08 Score=86.94 Aligned_cols=114 Identities=18% Similarity=0.228 Sum_probs=80.6
Q ss_pred CEEEEEe-cChHHHHHHHHHhhCCCEEEEEcCCCCH-HHH-HhcC-------ccccChhhhccCCCEEEEecCCchhhHh
Q psy6348 99 KTLAVLG-LGRIGREVALRMQAFGMKVIGFDPMVSV-EDA-AKLN-------IASLGLEDIWPLADYITVHTPLIPQTKN 168 (333)
Q Consensus 99 ktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a-~~~g-------v~~~~l~ell~~aDvV~l~~P~t~~t~~ 168 (333)
++++|+| .|.||+.+++.|...|++|.+||+.... +.. +..+ +...+++++++++|+|++++| ...++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~-~~~~~~ 79 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIP-WEHAID 79 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSC-HHHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCC-hhhHHH
Confidence 3799999 9999999999999999999999986522 222 1122 333467788899999999999 344555
Q ss_pred hccHHHHhccCCCcEEEEccCCcccc------------hHhHHhhhhcCCceEEEeccCCCCC
Q psy6348 169 LINAEVLKKCKKGVRVVNVARGGIVD------------ENALLDSLKCGHCGGAALDVFCEEP 219 (333)
Q Consensus 169 li~~~~~~~mk~gailIN~aRg~~vd------------~~aL~~aL~~g~i~gaalDV~~~EP 219 (333)
++. +..+.++ +.++|+++.|--.+ .+.+.+.+.. ...++.+.+.|
T Consensus 80 ~~~-~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~----~~~v~~~~~~~ 136 (212)
T 1jay_A 80 TAR-DLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES----EKVVSALHTIP 136 (212)
T ss_dssp HHH-HTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC----SCEEECCTTCC
T ss_pred HHH-HHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC----CeEEEEccchH
Confidence 543 3334464 89999999865432 4667766653 23567777766
No 118
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.66 E-value=9.8e-08 Score=90.52 Aligned_cols=103 Identities=22% Similarity=0.233 Sum_probs=73.8
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhc-Cc--------------cc-cChhhhccCCCEEEEecC
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKL-NI--------------AS-LGLEDIWPLADYITVHTP 161 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~-gv--------------~~-~~l~ell~~aDvV~l~~P 161 (333)
++|+|||+|.||+.+|..|...|++|.+||+... .+...+. ++ .. .+++++++++|+|++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 6899999999999999999999999999998652 2333332 22 12 267788899999999999
Q ss_pred CchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhc
Q psy6348 162 LIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKC 204 (333)
Q Consensus 162 ~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~ 204 (333)
... +..++ ++..+.+++++++|++ .|.......+.+.+..
T Consensus 85 ~~~-~~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~ 124 (359)
T 1bg6_A 85 AIH-HASIA-ANIASYISEGQLIILN-PGATGGALEFRKILRE 124 (359)
T ss_dssp GGG-HHHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHH
T ss_pred chH-HHHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHh
Confidence 544 45554 5566778999999999 4412233334555543
No 119
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.65 E-value=3.2e-07 Score=91.32 Aligned_cols=115 Identities=18% Similarity=0.216 Sum_probs=78.9
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHh-----------cC-----------ccc-cChhhhccCC
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAK-----------LN-----------IAS-LGLEDIWPLA 153 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-----------~g-----------v~~-~~l~ell~~a 153 (333)
-++|+|||+|.||..+|..+...|++|++||+.... +.+.+ .| ... .++ +.+++|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 468999999999999999999999999999986521 22111 11 011 245 568899
Q ss_pred CEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCC
Q psy6348 154 DYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFC 216 (333)
Q Consensus 154 DvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~ 216 (333)
|+|+.++|...+.+.-+-++..+.++++++|++.+. ++ ....|.+.+... -.-.+++.|.
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs-~~-~~~~la~~~~~~-~~~ig~hf~~ 175 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS-AL-NVDDIASSTDRP-QLVIGTHFFS 175 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCS-SS-CHHHHHTTSSCG-GGEEEEEECS
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCC-Cc-CHHHHHHHhcCC-cceEEeecCC
Confidence 999999997655555444566677899999997433 33 334777776532 2235666673
No 120
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.63 E-value=1.1e-07 Score=86.55 Aligned_cols=70 Identities=11% Similarity=0.127 Sum_probs=58.2
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhccHHHHhc
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINAEVLKK 177 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~ 177 (333)
.++|||||+|+||.++|+.|+..|++|.+||+. ++ +++|| ++++|.. ....++ .+....
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~----------------~~-~~~aD--ilavP~~-ai~~vl-~~l~~~ 64 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP----------------ED-IRDFE--LVVIDAH-GVEGYV-EKLSAF 64 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG----------------GG-GGGCS--EEEECSS-CHHHHH-HHHHTT
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH----------------HH-hccCC--EEEEcHH-HHHHHH-HHHHHh
Confidence 468999999999999999999999999999982 22 56799 9999965 556665 556667
Q ss_pred cCCCcEEEEcc
Q psy6348 178 CKKGVRVVNVA 188 (333)
Q Consensus 178 mk~gailIN~a 188 (333)
+++|+++++++
T Consensus 65 l~~g~ivvd~s 75 (232)
T 3dfu_A 65 ARRGQMFLHTS 75 (232)
T ss_dssp CCTTCEEEECC
T ss_pred cCCCCEEEEEC
Confidence 89999999985
No 121
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.63 E-value=6.4e-08 Score=93.30 Aligned_cols=96 Identities=18% Similarity=0.191 Sum_probs=73.2
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcC--------------ccc-cChhhhccCCCEEEEec
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLN--------------IAS-LGLEDIWPLADYITVHT 160 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g--------------v~~-~~l~ell~~aDvV~l~~ 160 (333)
..++|+|||.|.||..+|..|...|++|.+||+... .+...+.+ +.. .++++.+++||+|++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaV 107 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVV 107 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECC
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECC
Confidence 346899999999999999999999999999999642 22333322 122 26788899999999999
Q ss_pred CCchhhHhhccHHHHhccCCCcEEEEccCCcccc
Q psy6348 161 PLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVD 194 (333)
Q Consensus 161 P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd 194 (333)
|. ...+.++ ++....+++++++|+++.|=..+
T Consensus 108 p~-~~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~ 139 (356)
T 3k96_A 108 PS-FAFHEVI-TRMKPLIDAKTRIAWGTKGLAKG 139 (356)
T ss_dssp CH-HHHHHHH-HHHGGGCCTTCEEEECCCSCBTT
T ss_pred CH-HHHHHHH-HHHHHhcCCCCEEEEEeCCCCcC
Confidence 94 4555555 55667789999999998875544
No 122
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.62 E-value=1.7e-07 Score=98.12 Aligned_cols=115 Identities=19% Similarity=0.150 Sum_probs=80.9
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHH-----------HhcC-------------cccc-Chhhhcc
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDA-----------AKLN-------------IASL-GLEDIWP 151 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a-----------~~~g-------------v~~~-~l~ell~ 151 (333)
=++|||||+|.||..+|..+...|++|++||+.... +.+ .+.| ++.. ++ +.++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~ 392 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFG 392 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGG
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHC
Confidence 368999999999999999999999999999996522 211 1123 1122 45 6789
Q ss_pred CCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCC
Q psy6348 152 LADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFC 216 (333)
Q Consensus 152 ~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~ 216 (333)
+||+|+.++|...+.+.-+-.+..+.++++++|+..+.+- ....+.+.+... -...+++.|.
T Consensus 393 ~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl--~i~~la~~~~~~-~~~ig~hf~~ 454 (715)
T 1wdk_A 393 NVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTI--SISLLAKALKRP-ENFVGMHFFN 454 (715)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSS--CHHHHGGGCSCG-GGEEEEECCS
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCC--CHHHHHHHhcCc-cceEEEEccC
Confidence 9999999999877766655566777899999998554442 334566666432 2235677666
No 123
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.61 E-value=8.5e-08 Score=90.18 Aligned_cols=103 Identities=13% Similarity=0.118 Sum_probs=74.1
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcC--CCC-HHHHHhcCc-----------ccc---ChhhhccCCCEEEEecC
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDP--MVS-VEDAAKLNI-----------ASL---GLEDIWPLADYITVHTP 161 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~--~~~-~~~a~~~gv-----------~~~---~l~ell~~aDvV~l~~P 161 (333)
++|+|||+|.||+.+|..|...|++|++||+ ... .+...+.|. ... ++.+.++++|+|++++|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 3799999999999999999999999999998 542 233334342 222 56677899999999999
Q ss_pred CchhhHhhccHHHHhccCCCcEEEEccCCc---c-cchHhHHhhhhc
Q psy6348 162 LIPQTKNLINAEVLKKCKKGVRVVNVARGG---I-VDENALLDSLKC 204 (333)
Q Consensus 162 ~t~~t~~li~~~~~~~mk~gailIN~aRg~---~-vd~~aL~~aL~~ 204 (333)
.. .+..++ .+... ++++.++|+++.|- - -..+.+.+.+.+
T Consensus 81 ~~-~~~~v~-~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 81 TD-GVLPVM-SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp GG-GHHHHH-HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred hH-HHHHHH-HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 54 555555 34556 88999999998774 1 133455565554
No 124
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.60 E-value=1.3e-07 Score=92.46 Aligned_cols=106 Identities=15% Similarity=0.139 Sum_probs=79.0
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhcCc------------------ccc-ChhhhccCCCEEEE
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKLNI------------------ASL-GLEDIWPLADYITV 158 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~gv------------------~~~-~l~ell~~aDvV~l 158 (333)
++|+|||+|.||..+|..|.. |++|++||+.... +...+.+. ... ++.+.+++||+|++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 479999999999999999999 9999999986522 22222232 122 45677889999999
Q ss_pred ecCCch----------hhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCc
Q psy6348 159 HTPLIP----------QTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHC 207 (333)
Q Consensus 159 ~~P~t~----------~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i 207 (333)
++|... .....+ +...+ ++++.++|+.+.-++-..+.+.+.+....+
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~~v 136 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTDRI 136 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCSCE
T ss_pred ecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCCeE
Confidence 999653 244444 44556 899999999888888778888888766533
No 125
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.60 E-value=1.1e-07 Score=93.42 Aligned_cols=95 Identities=22% Similarity=0.253 Sum_probs=78.3
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcC-------CCCHHHHHhcCccccChhhhccCCCEEEEecCCchhh
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDP-------MVSVEDAAKLNIASLGLEDIWPLADYITVHTPLIPQT 166 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~-------~~~~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t 166 (333)
.-|+||||+|||||.-|.+-|..|+..|.+|++--+ +.+.+.+.+.|++..+..|+.++||+|++.+|+..+
T Consensus 33 ~~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~~~~eA~~~ADvV~~L~PD~~q- 111 (491)
T 3ulk_A 33 SYLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQH- 111 (491)
T ss_dssp GGGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEEEHHHHGGGCSEEEECSCGGGH-
T ss_pred HHHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEecCHHHHHHhCCEEEEeCChhhH-
Confidence 348999999999999999999999999999987533 124467788899988999999999999999996433
Q ss_pred HhhccHHHHhccCCCcEEEEccCCc
Q psy6348 167 KNLINAEVLKKCKKGVRVVNVARGG 191 (333)
Q Consensus 167 ~~li~~~~~~~mk~gailIN~aRg~ 191 (333)
..+. ++..+.||+|+.|. .|.|=
T Consensus 112 ~~vy-~~I~p~lk~G~~L~-faHGF 134 (491)
T 3ulk_A 112 SDVV-RTVQPLMKDGAALG-YSHGF 134 (491)
T ss_dssp HHHH-HHHGGGSCTTCEEE-ESSCH
T ss_pred HHHH-HHHHhhCCCCCEEE-ecCcc
Confidence 3344 56999999999887 56664
No 126
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.59 E-value=1.3e-07 Score=94.68 Aligned_cols=106 Identities=9% Similarity=0.030 Sum_probs=75.7
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhc-------C-------------cccc-ChhhhccCCCE
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKL-------N-------------IASL-GLEDIWPLADY 155 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~-------g-------------v~~~-~l~ell~~aDv 155 (333)
..+|+|||+|.||..+|..|...|++|++||+.... +...+. | +... ++++.+++||+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 369999999999999999999999999999986422 222221 1 1121 56678889999
Q ss_pred EEEecCCc---------hhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhc
Q psy6348 156 ITVHTPLI---------PQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKC 204 (333)
Q Consensus 156 V~l~~P~t---------~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~ 204 (333)
|++|+|.. ...+..+ +...+.+++++++|+.+.-.+-..+.+.+.+.+
T Consensus 88 viiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~ 144 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAE 144 (478)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHH
Confidence 99999952 3444444 456677999999999985445445555555543
No 127
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.59 E-value=5.6e-08 Score=88.49 Aligned_cols=98 Identities=13% Similarity=0.228 Sum_probs=71.3
Q ss_pred CCEEEEEecChHHHHHHHHHhhCC----CEEEEEcCCCCHHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhccH
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFG----MKVIGFDPMVSVEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLINA 172 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G----~~V~~~d~~~~~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~ 172 (333)
.++|||||+|.||+.+|..|...| .+|.+||+.... .|+... +.+++++++|+|++++| ....+.++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-----~g~~~~~~~~~~~~~~D~vi~~v~-~~~~~~v~~- 76 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-----TTLNYMSSNEELARHCDIIVCAVK-PDIAGSVLN- 76 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-----SSSEECSCHHHHHHHCSEEEECSC-TTTHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-----CceEEeCCHHHHHhcCCEEEEEeC-HHHHHHHHH-
Confidence 358999999999999999999888 689999997643 566654 68888999999999999 455555553
Q ss_pred HHHhccCCCcEEEEccCCcccchHhHHhhhhcC
Q psy6348 173 EVLKKCKKGVRVVNVARGGIVDENALLDSLKCG 205 (333)
Q Consensus 173 ~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g 205 (333)
+..+.++ +..+|....| ++.+.+.+.+..+
T Consensus 77 ~l~~~l~-~~~vv~~~~g--i~~~~l~~~~~~~ 106 (262)
T 2rcy_A 77 NIKPYLS-SKLLISICGG--LNIGKLEEMVGSE 106 (262)
T ss_dssp HSGGGCT-TCEEEECCSS--CCHHHHHHHHCTT
T ss_pred HHHHhcC-CCEEEEECCC--CCHHHHHHHhCCC
Confidence 4445564 5555555444 2334666666554
No 128
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.59 E-value=1.4e-07 Score=93.23 Aligned_cols=107 Identities=21% Similarity=0.279 Sum_probs=75.7
Q ss_pred cCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccc---cChhhh---------------ccCCCEEE
Q psy6348 96 LYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIAS---LGLEDI---------------WPLADYIT 157 (333)
Q Consensus 96 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~---~~l~el---------------l~~aDvV~ 157 (333)
-+|.++.|||+|.||..+|..|...|++|++||+....-.....|... ..++|+ +++||+|+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvi 88 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI 88 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEE
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEE
Confidence 468999999999999999999999999999999965332222222111 012221 46899999
Q ss_pred EecCCchh--------hHhhc--cHHHHhccCCCcEEEEccCCcccchHhHHhhh
Q psy6348 158 VHTPLIPQ--------TKNLI--NAEVLKKCKKGVRVVNVARGGIVDENALLDSL 202 (333)
Q Consensus 158 l~~P~t~~--------t~~li--~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL 202 (333)
+|+|.... ...+. .+...+.|++|.++|+.|.-.+-..+.+.+.+
T Consensus 89 i~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i 143 (431)
T 3ojo_A 89 IAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPV 143 (431)
T ss_dssp ECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHH
T ss_pred EEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHH
Confidence 99995432 11233 25567789999999999998888888887764
No 129
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.58 E-value=2.1e-07 Score=93.08 Aligned_cols=103 Identities=20% Similarity=0.133 Sum_probs=77.7
Q ss_pred CEEEEEecChHHHHHHHHHhhC-CC-EEEEEcCCCC----HHHHHhc----------------------C-ccccChhhh
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF-GM-KVIGFDPMVS----VEDAAKL----------------------N-IASLGLEDI 149 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~-G~-~V~~~d~~~~----~~~a~~~----------------------g-v~~~~l~el 149 (333)
++|+|||+|.||..+|..|... |+ +|++||+... .-..... | +...+-.+.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd~ea 98 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDFSR 98 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCcHHH
Confidence 6899999999999999999999 99 9999998766 3221111 1 222233678
Q ss_pred ccCCCEEEEecCCch--------hhHhhc--cHHHHhccCCCcEEEEccCCcccchHhHHhh
Q psy6348 150 WPLADYITVHTPLIP--------QTKNLI--NAEVLKKCKKGVRVVNVARGGIVDENALLDS 201 (333)
Q Consensus 150 l~~aDvV~l~~P~t~--------~t~~li--~~~~~~~mk~gailIN~aRg~~vd~~aL~~a 201 (333)
+++||+|++|+|... +...+. .+...+.+++|.++|+.|.-.+-..+.+.+.
T Consensus 99 ~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ 160 (478)
T 3g79_A 99 ISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQ 160 (478)
T ss_dssp GGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHH
T ss_pred HhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHH
Confidence 899999999999542 233333 2556788999999999999888888888763
No 130
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.56 E-value=1.1e-07 Score=84.98 Aligned_cols=90 Identities=18% Similarity=0.150 Sum_probs=65.4
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEE-EcCCCCH-H-HHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhccHH
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIG-FDPMVSV-E-DAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLINAE 173 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~-~d~~~~~-~-~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~~ 173 (333)
-++|+|||+|.||+.+|+.|...|++|.+ ||+.... + ..++.|+... +..+.++++|+|++++|. .....++..
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~-~~~~~v~~~- 100 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPY-DSIADIVTQ- 100 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCG-GGHHHHHTT-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCCh-HHHHHHHHH-
Confidence 46899999999999999999999999999 9987632 2 2344565443 556678999999999993 333433321
Q ss_pred HHhccCCCcEEEEccCCc
Q psy6348 174 VLKKCKKGVRVVNVARGG 191 (333)
Q Consensus 174 ~~~~mk~gailIN~aRg~ 191 (333)
+.. .++.++|+++-|-
T Consensus 101 -l~~-~~~~ivi~~~~g~ 116 (220)
T 4huj_A 101 -VSD-WGGQIVVDASNAI 116 (220)
T ss_dssp -CSC-CTTCEEEECCCCB
T ss_pred -hhc-cCCCEEEEcCCCC
Confidence 222 3588999998653
No 131
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=98.55 E-value=1.5e-07 Score=89.28 Aligned_cols=86 Identities=21% Similarity=0.284 Sum_probs=65.6
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcC-----------cccc-ChhhhccCCCEEEEecCCch
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLN-----------IASL-GLEDIWPLADYITVHTPLIP 164 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g-----------v~~~-~l~ell~~aDvV~l~~P~t~ 164 (333)
..+|+|||+|.||..+|.+|...|++|.+||+... .+...+.| +... ++++ ++.+|+|++++| +.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk-~~ 91 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIP-VQ 91 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSC-GG
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECC-HH
Confidence 45899999999999999999999999999999642 23333334 2332 6777 889999999999 45
Q ss_pred hhHhhccHHHHhccC-CCcEEEEccCC
Q psy6348 165 QTKNLINAEVLKKCK-KGVRVVNVARG 190 (333)
Q Consensus 165 ~t~~li~~~~~~~mk-~gailIN~aRg 190 (333)
.++.++. .++ ++.++|+++.|
T Consensus 92 ~~~~v~~-----~l~~~~~~vv~~~nG 113 (335)
T 1z82_A 92 YIREHLL-----RLPVKPSMVLNLSKG 113 (335)
T ss_dssp GHHHHHT-----TCSSCCSEEEECCCC
T ss_pred HHHHHHH-----HhCcCCCEEEEEeCC
Confidence 5555542 233 78999999876
No 132
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.55 E-value=2.4e-07 Score=77.53 Aligned_cols=102 Identities=11% Similarity=0.107 Sum_probs=78.2
Q ss_pred cCCCEEEEEec----ChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhc
Q psy6348 96 LYGKTLAVLGL----GRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLI 170 (333)
Q Consensus 96 l~gktvGIIGl----G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li 170 (333)
+.-++|+|||+ |++|..+++.|...|++|+.+||.... -.|+... +++|+....|++++++| .+....++
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~----i~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v~ 86 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE----IEGLKCYRSVRELPKDVDVIVFVVP-PKVGLQVA 86 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE----ETTEECBSSGGGSCTTCCEEEECSC-HHHHHHHH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCe----ECCeeecCCHHHhCCCCCEEEEEeC-HHHHHHHH
Confidence 45679999999 999999999999999999999986421 1477655 79999999999999999 56667776
Q ss_pred cHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 171 NAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 171 ~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
. +..+ ...++++++.+. ..+++.++.++..+.
T Consensus 87 ~-~~~~-~g~~~i~~~~~~----~~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 87 K-EAVE-AGFKKLWFQPGA----ESEEIRRFLEKAGVE 118 (138)
T ss_dssp H-HHHH-TTCCEEEECTTS----CCHHHHHHHHHHTCE
T ss_pred H-HHHH-cCCCEEEEcCcc----HHHHHHHHHHHCCCE
Confidence 3 3444 566777777643 267788888876665
No 133
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.54 E-value=4.5e-07 Score=95.01 Aligned_cols=114 Identities=17% Similarity=0.107 Sum_probs=78.8
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHh-----------cC-------------cccc-ChhhhccC
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAK-----------LN-------------IASL-GLEDIWPL 152 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-----------~g-------------v~~~-~l~ell~~ 152 (333)
++|||||+|.||..+|..+...|++|++||+.... +.+.. .| ++.. ++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 68999999999999999999999999999996522 11111 12 1122 45 57899
Q ss_pred CCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCC
Q psy6348 153 ADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFC 216 (333)
Q Consensus 153 aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~ 216 (333)
||+|+.++|...+.+.-+-.+..+.++++++|+..+.+- ....+.+.++.. -.-.+++.|.
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl--~i~~la~~~~~p-~~~iG~hf~~ 452 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTI--DLNKIGERTKSQ-DRIVGAHFFS 452 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHTTTCSCT-TTEEEEEECS
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCC--CHHHHHHHhcCC-CCEEEecCCC
Confidence 999999999877666555566777899999996554433 334566665432 1235666666
No 134
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.54 E-value=1.5e-07 Score=89.42 Aligned_cols=92 Identities=14% Similarity=0.120 Sum_probs=69.6
Q ss_pred CEEEEEecChHHHHHHHHHhhCC-------CEEEEEcCCCC-----H-HHHHhc--------------Cccc-cChhhhc
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFG-------MKVIGFDPMVS-----V-EDAAKL--------------NIAS-LGLEDIW 150 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G-------~~V~~~d~~~~-----~-~~a~~~--------------gv~~-~~l~ell 150 (333)
++|+|||+|.||..+|..|...| .+|.+||+... . +...+. ++.. .++++++
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQAA 88 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHHH
Confidence 58999999999999999998888 89999998764 3 222221 1222 2577888
Q ss_pred cCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcc
Q psy6348 151 PLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGI 192 (333)
Q Consensus 151 ~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~ 192 (333)
++||+|++++|. .....++ ++....+++++++|+++.|-.
T Consensus 89 ~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 89 EDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp TTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBC
T ss_pred cCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccC
Confidence 999999999994 4555555 445567889999999988754
No 135
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.53 E-value=1.4e-07 Score=94.43 Aligned_cols=105 Identities=11% Similarity=0.046 Sum_probs=76.8
Q ss_pred CEEEEEecChHHHHHHHHHhhC--CCEEEEEcCCCCHHHHHhc--------------------Ccccc-ChhhhccCCCE
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF--GMKVIGFDPMVSVEDAAKL--------------------NIASL-GLEDIWPLADY 155 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~~a~~~--------------------gv~~~-~l~ell~~aDv 155 (333)
++|+|||+|.||..+|..|... |++|++||+.......... ++... ++.+.+++||+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 5899999999999999999876 7999999986422111111 12222 45677889999
Q ss_pred EEEecCCchh--------------hHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhc
Q psy6348 156 ITVHTPLIPQ--------------TKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKC 204 (333)
Q Consensus 156 V~l~~P~t~~--------------t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~ 204 (333)
|++|+|.... ....+ +...+.+++|.++|+.|.-.+-..+.+.+.+++
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~~-~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESVS-RTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEecCCccccccccccCCCcHHHHHHHH-HHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 9999985331 22222 456678999999999988777677778888876
No 136
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.52 E-value=5.9e-08 Score=92.98 Aligned_cols=92 Identities=17% Similarity=0.188 Sum_probs=69.1
Q ss_pred EEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcC--------------ccc-cChhhhccCCCEEEEecCCc
Q psy6348 100 TLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLN--------------IAS-LGLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 100 tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g--------------v~~-~~l~ell~~aDvV~l~~P~t 163 (333)
+|+|||+|.||..+|..|...|++|.+||+... .+...+.+ +.. .+++++++++|+|++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~- 95 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT- 95 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh-
Confidence 899999999999999999999999999998652 22233322 222 2577888999999999994
Q ss_pred hhhHhhccHH---HHhccCC-CcEEEEccCCcc
Q psy6348 164 PQTKNLINAE---VLKKCKK-GVRVVNVARGGI 192 (333)
Q Consensus 164 ~~t~~li~~~---~~~~mk~-gailIN~aRg~~ 192 (333)
.....++... ....+++ ++++|+++.|-.
T Consensus 96 ~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~ 128 (366)
T 1evy_A 96 QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIE 128 (366)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCC
T ss_pred HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCC
Confidence 5556665331 4556778 999999987643
No 137
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=98.50 E-value=1.7e-07 Score=90.27 Aligned_cols=91 Identities=14% Similarity=0.175 Sum_probs=68.4
Q ss_pred CEEEEEecChHHHHHHHHHhhCC-------CEEEEEcCCCC-----H-HHHHhc--------------Ccccc-Chhhhc
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFG-------MKVIGFDPMVS-----V-EDAAKL--------------NIASL-GLEDIW 150 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G-------~~V~~~d~~~~-----~-~~a~~~--------------gv~~~-~l~ell 150 (333)
++|+|||+|.||..+|..|...| .+|.+||+... . +...+. ++... ++++++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 47999999999999999998878 99999998765 3 222221 12222 577888
Q ss_pred cCCCEEEEecCCchhhHhhccHHHHh----ccCCCcEEEEccCCc
Q psy6348 151 PLADYITVHTPLIPQTKNLINAEVLK----KCKKGVRVVNVARGG 191 (333)
Q Consensus 151 ~~aDvV~l~~P~t~~t~~li~~~~~~----~mk~gailIN~aRg~ 191 (333)
+++|+|++++| +...+.++ .+... .+++++++|+++.|-
T Consensus 102 ~~aDvVilav~-~~~~~~vl-~~i~~~~~~~l~~~~ivvs~~~Gi 144 (375)
T 1yj8_A 102 NDADLLIFIVP-CQYLESVL-ASIKESESIKIASHAKAISLTKGF 144 (375)
T ss_dssp TTCSEEEECCC-HHHHHHHH-HHHTC---CCCCTTCEEEECCCSC
T ss_pred cCCCEEEEcCC-HHHHHHHH-HHHhhhhhccCCCCCEEEEeCCcc
Confidence 99999999999 45555555 33445 688899999998773
No 138
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=98.46 E-value=2.1e-07 Score=85.33 Aligned_cols=103 Identities=14% Similarity=0.145 Sum_probs=71.9
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhc---Cc----c-ccChhhhccCCCEEEEecCCchhhHhh
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKL---NI----A-SLGLEDIWPLADYITVHTPLIPQTKNL 169 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~---gv----~-~~~l~ell~~aDvV~l~~P~t~~t~~l 169 (333)
++|+|||+|.||+.+|..|...|++|.+||+.... +..... |. . ..+..+.++++|+|++++|.. .+..+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~-~~~~v 79 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW-QVSDA 79 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG-GHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHH-hHHHH
Confidence 47999999999999999999999999999987632 111111 11 0 123346778999999999954 45555
Q ss_pred ccHHHHhccCCCcEEEEccCCcccchHhHHhhhhc
Q psy6348 170 INAEVLKKCKKGVRVVNVARGGIVDENALLDSLKC 204 (333)
Q Consensus 170 i~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~ 204 (333)
+ ++..+.+++++++|++..| +-..+.+.+.+..
T Consensus 80 ~-~~l~~~l~~~~~vv~~~~g-~~~~~~l~~~~~~ 112 (291)
T 1ks9_A 80 V-KSLASTLPVTTPILLIHNG-MGTIEELQNIQQP 112 (291)
T ss_dssp H-HHHHTTSCTTSCEEEECSS-SCTTGGGTTCCSC
T ss_pred H-HHHHhhCCCCCEEEEecCC-CCcHHHHHHhcCC
Confidence 5 4556778899999998654 3333455555543
No 139
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=98.46 E-value=1.3e-07 Score=88.12 Aligned_cols=105 Identities=16% Similarity=0.122 Sum_probs=74.6
Q ss_pred CEEEEEecChHHHHHHHHHhhC-----C-CEEEEEcCCCCHHHHHh-cCcccc--------------ChhhhccCCCEEE
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF-----G-MKVIGFDPMVSVEDAAK-LNIASL--------------GLEDIWPLADYIT 157 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~-----G-~~V~~~d~~~~~~~a~~-~gv~~~--------------~l~ell~~aDvV~ 157 (333)
++|+|||+|.||..+|..|... | .+|++||+....+...+ .|+... +..+.+..+|+|+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi 88 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIARGAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYIL 88 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECCHHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEcHHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEEE
Confidence 4899999999999999999988 9 99999998212334444 565432 2335578999999
Q ss_pred EecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCC
Q psy6348 158 VHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGH 206 (333)
Q Consensus 158 l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~ 206 (333)
+++|... +..++ ++....++++.++|.+.-| +-..+.+.+.+...+
T Consensus 89 l~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG-~~~~~~l~~~l~~~~ 134 (317)
T 2qyt_A 89 FCTKDYD-MERGV-AEIRPMIGQNTKILPLLNG-ADIAERMRTYLPDTV 134 (317)
T ss_dssp ECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCS-SSHHHHHTTTSCTTT
T ss_pred EecCccc-HHHHH-HHHHhhcCCCCEEEEccCC-CCcHHHHHHHCCCCc
Confidence 9999644 45554 3455667888999998766 333466777665433
No 140
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.46 E-value=4.6e-07 Score=81.79 Aligned_cols=98 Identities=17% Similarity=0.224 Sum_probs=72.7
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEE-EEEcCCCCHHHHHhcCccccChhhhc-cCCCEEEEecCCchhhHhhccHHHHh
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKV-IGFDPMVSVEDAAKLNIASLGLEDIW-PLADYITVHTPLIPQTKNLINAEVLK 176 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V-~~~d~~~~~~~a~~~gv~~~~l~ell-~~aDvV~l~~P~t~~t~~li~~~~~~ 176 (333)
.+|||||+|.||+.+++.+...|+++ .+||+....+ + .+.++++++ .++|+|++++|.... . +....
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~~~---~---~~~~~~~l~~~~~DvVv~~~~~~~~-~----~~~~~ 69 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGEHE---K---MVRGIDEFLQREMDVAVEAASQQAV-K----DYAEK 69 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCCCT---T---EESSHHHHTTSCCSEEEECSCHHHH-H----HHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcchh---h---hcCCHHHHhcCCCCEEEECCCHHHH-H----HHHHH
Confidence 37999999999999999998889997 6899864221 1 334789998 799999999994322 2 22235
Q ss_pred ccCCCcEEEEccCCcccch---HhHHhhhhcCCc
Q psy6348 177 KCKKGVRVVNVARGGIVDE---NALLDSLKCGHC 207 (333)
Q Consensus 177 ~mk~gailIN~aRg~~vd~---~aL~~aL~~g~i 207 (333)
.++.|..+|..+.+..-+. +.|.++.++...
T Consensus 70 ~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~ 103 (236)
T 2dc1_A 70 ILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGR 103 (236)
T ss_dssp HHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCC
T ss_pred HHHCCCcEEEECcccCChHHHHHHHHHHHHhcCC
Confidence 5788999999988776655 567777665433
No 141
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.45 E-value=3.5e-07 Score=78.90 Aligned_cols=93 Identities=16% Similarity=0.204 Sum_probs=66.9
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhC-CCEEEEEcCCCCH-HHHHhcCcccc-----C---hhhh--ccCCCEEEEecC
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAF-GMKVIGFDPMVSV-EDAAKLNIASL-----G---LEDI--WPLADYITVHTP 161 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~-G~~V~~~d~~~~~-~~a~~~gv~~~-----~---l~el--l~~aDvV~l~~P 161 (333)
.++.+++++|+|+|.+|+.+|+.|+.. |++|+++|+.... +.+.+.|+... + +.++ +.++|+|++++|
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 457788999999999999999999999 9999999986532 33455565432 1 3454 778999999999
Q ss_pred CchhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 162 LIPQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 162 ~t~~t~~li~~~~~~~mk~gailIN~a 188 (333)
..+.+..++ ..+..+.++..+|..+
T Consensus 115 ~~~~~~~~~--~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 115 HHQGNQTAL--EQLQRRNYKGQIAAIA 139 (183)
T ss_dssp SHHHHHHHH--HHHHHTTCCSEEEEEE
T ss_pred ChHHHHHHH--HHHHHHCCCCEEEEEE
Confidence 655444433 3455566666666543
No 142
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.43 E-value=4.2e-07 Score=86.31 Aligned_cols=108 Identities=13% Similarity=0.158 Sum_probs=77.8
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccc--------------cChhhhccCCCEEEEecCCc
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIAS--------------LGLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~--------------~~l~ell~~aDvV~l~~P~t 163 (333)
.++|+|||+|.||..+|..|...|.+|.+|++....+...+.|... .++++ +..+|+|++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~- 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA- 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc-
Confidence 3689999999999999999999999999999853334444555432 14555 5889999999994
Q ss_pred hhhHhhccHHHHhccCCCcEEEEccCCc------------------ccchHhHHhhhhcCCce
Q psy6348 164 PQTKNLINAEVLKKCKKGVRVVNVARGG------------------IVDENALLDSLKCGHCG 208 (333)
Q Consensus 164 ~~t~~li~~~~~~~mk~gailIN~aRg~------------------~vd~~aL~~aL~~g~i~ 208 (333)
..+..++ ++....+++++++|.+..|= +-.++.+.+.+...++.
T Consensus 81 ~~~~~~~-~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~v~ 142 (335)
T 3ghy_A 81 PALESVA-AGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVL 142 (335)
T ss_dssp HHHHHHH-GGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGGGEE
T ss_pred hhHHHHH-HHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcccEE
Confidence 4555554 33445678899999998882 23345677777555554
No 143
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.41 E-value=4.2e-07 Score=76.59 Aligned_cols=102 Identities=17% Similarity=0.144 Sum_probs=78.0
Q ss_pred CCEEEEEec----ChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhccH
Q psy6348 98 GKTLAVLGL----GRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLINA 172 (333)
Q Consensus 98 gktvGIIGl----G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~ 172 (333)
-++|+|||+ |++|..+++.|...|++|+.+||....+ +-.|+... +++|+....|++++++| .+....++.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~--~i~G~~~~~sl~el~~~~Dlvii~vp-~~~v~~v~~- 88 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGK--TLLGQQGYATLADVPEKVDMVDVFRN-SEAAWGVAQ- 88 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTS--EETTEECCSSTTTCSSCCSEEECCSC-STHHHHHHH-
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccc--ccCCeeccCCHHHcCCCCCEEEEEeC-HHHHHHHHH-
Confidence 578999999 8999999999999999999999865101 12476655 79999999999999999 466677763
Q ss_pred HHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 173 EVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 173 ~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
+..+ ...+.++++.+ .. ++++.+++++..++
T Consensus 89 ~~~~-~g~~~i~i~~~--~~--~~~l~~~a~~~Gi~ 119 (145)
T 2duw_A 89 EAIA-IGAKTLWLQLG--VI--NEQAAVLAREAGLS 119 (145)
T ss_dssp HHHH-HTCCEEECCTT--CC--CHHHHHHHHTTTCE
T ss_pred HHHH-cCCCEEEEcCC--hH--HHHHHHHHHHcCCE
Confidence 3333 56677777753 22 78888888887776
No 144
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.39 E-value=2e-06 Score=81.06 Aligned_cols=106 Identities=13% Similarity=0.093 Sum_probs=77.5
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcc---------------c-cChhhhccCCCEEEEecCC
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIA---------------S-LGLEDIWPLADYITVHTPL 162 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~---------------~-~~l~ell~~aDvV~l~~P~ 162 (333)
++|+|||.|.||..+|..|...|.+|.+|++.. .+..++.|+. . .+++++.+.+|+|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~-~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~ 81 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD-YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKV 81 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT-HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh-HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCC
Confidence 589999999999999999999999999999975 3444444431 1 2456666689999999995
Q ss_pred chhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 163 IPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 163 t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
.. +..++ +.....+++++++|.+.-| +-.++.+.+.+...++.
T Consensus 82 ~~-~~~~l-~~l~~~l~~~t~Iv~~~nG-i~~~~~l~~~~~~~~vl 124 (320)
T 3i83_A 82 VE-GADRV-GLLRDAVAPDTGIVLISNG-IDIEPEVAAAFPDNEVI 124 (320)
T ss_dssp CT-TCCHH-HHHTTSCCTTCEEEEECSS-SSCSHHHHHHSTTSCEE
T ss_pred CC-hHHHH-HHHHhhcCCCCEEEEeCCC-CChHHHHHHHCCCCcEE
Confidence 43 44443 4455668889999988765 33457777777655544
No 145
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.38 E-value=1e-06 Score=81.78 Aligned_cols=93 Identities=19% Similarity=0.141 Sum_probs=66.9
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhcCccccChhhhccCCCEEEEecCCchhhHhhccHHHH-
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINAEVL- 175 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~- 175 (333)
||++.|+|.|.+|++++..|...|.+|.+++|+... +...+.++...+++++- ++|+|+.++|........+..+.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~~~~~l~-~~DiVInaTp~Gm~~~~~l~~~~l~ 196 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCFMEPPKS-AFDLIINATSASLHNELPLNKEVLK 196 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEESSCCSS-CCSEEEECCTTCCCCSCSSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEecHHHhc-cCCEEEEcccCCCCCCCCCChHHHH
Confidence 899999999999999999999999999999998743 22225666655666654 899999999964322122444322
Q ss_pred hccCCCcEEEEccCCc
Q psy6348 176 KKCKKGVRVVNVARGG 191 (333)
Q Consensus 176 ~~mk~gailIN~aRg~ 191 (333)
+.++++.+++|+....
T Consensus 197 ~~l~~~~~v~D~vY~P 212 (269)
T 3phh_A 197 GYFKEGKLAYDLAYGF 212 (269)
T ss_dssp HHHHHCSEEEESCCSS
T ss_pred hhCCCCCEEEEeCCCC
Confidence 2456666777766654
No 146
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.31 E-value=2.8e-06 Score=80.72 Aligned_cols=132 Identities=16% Similarity=0.102 Sum_probs=93.3
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHH-----------HhcCc--------------cc-cChhhhc
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDA-----------AKLNI--------------AS-LGLEDIW 150 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a-----------~~~gv--------------~~-~~l~ell 150 (333)
-++|+|||.|.||+.+|..+...|++|+.||+.... +.+ .+.|. .. .++++.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~ 85 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHh
Confidence 468999999999999999999999999999986521 111 01111 11 2577889
Q ss_pred cCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcC
Q psy6348 151 PLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIK 230 (333)
Q Consensus 151 ~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~ 230 (333)
++||+|+=++|-+-+.+.-+-++.=+.++++++|-..+++ +...+|.++++. .=+-.++..|.+-|. -||.+
T Consensus 86 ~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs--l~is~ia~~~~~-p~r~ig~HffNP~~~-----m~LVE 157 (319)
T 3ado_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVNPPYY-----IPLVE 157 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECSSTTT-----CCEEE
T ss_pred ccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh--ccchhhhhhccC-CCcEEEecCCCCccc-----cchHH
Confidence 9999999999998888887777777889999998766555 455677777653 333456666654332 24443
Q ss_pred CCcEEEccCC
Q psy6348 231 HPKVIVTPHL 240 (333)
Q Consensus 231 ~pnvi~TPHi 240 (333)
|+-+|+.
T Consensus 158 ---iv~g~~T 164 (319)
T 3ado_A 158 ---LVPHPET 164 (319)
T ss_dssp ---EEECTTC
T ss_pred ---hcCCCCC
Confidence 5666653
No 147
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.30 E-value=2.2e-06 Score=72.07 Aligned_cols=98 Identities=14% Similarity=0.088 Sum_probs=63.8
Q ss_pred CccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHH-hcCcccc--C------hhhh-ccCCCEEEEec
Q psy6348 92 TGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAA-KLNIASL--G------LEDI-WPLADYITVHT 160 (333)
Q Consensus 92 ~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~-~~gv~~~--~------l~el-l~~aDvV~l~~ 160 (333)
+.....++++.|+|+|.+|+.+|+.|+..|.+|+++|+.... +.+. ..|.... + +.+. +.++|+|++++
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~ 92 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFT 92 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECS
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEe
Confidence 345677899999999999999999999999999999986532 2233 3454322 1 2333 67899999999
Q ss_pred CCchhhHhhccHHHHhccCCCcEEEEccCCc
Q psy6348 161 PLIPQTKNLINAEVLKKCKKGVRVVNVARGG 191 (333)
Q Consensus 161 P~t~~t~~li~~~~~~~mk~gailIN~aRg~ 191 (333)
|.......+ ......+.+...+|-..++.
T Consensus 93 ~~~~~~~~~--~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 93 NDDSTNFFI--SMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp SCHHHHHHH--HHHHHHTSCCSEEEEECSSG
T ss_pred CCcHHHHHH--HHHHHHHCCCCeEEEEECCH
Confidence 854332222 33444445556666655554
No 148
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=98.30 E-value=3.7e-06 Score=78.94 Aligned_cols=107 Identities=17% Similarity=0.138 Sum_probs=77.0
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccc---------------cChhhhccCCCEEEEecCCc
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIAS---------------LGLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~---------------~~l~ell~~aDvV~l~~P~t 163 (333)
++|+|||.|.||..+|..|...|.+|..|++.. .+..++.|+.. .+.+ .+..+|+|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~-~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~-~~~~~D~vilavk~~ 80 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD-YEAIAGNGLKVFSINGDFTLPHVKGYRAPE-EIGPMDLVLVGLKTF 80 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT-HHHHHHTCEEEEETTCCEEESCCCEESCHH-HHCCCSEEEECCCGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc-HHHHHhCCCEEEcCCCeEEEeeceeecCHH-HcCCCCEEEEecCCC
Confidence 579999999999999999999999999999875 44455555421 1233 367899999999943
Q ss_pred hhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEE
Q psy6348 164 PQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGA 210 (333)
Q Consensus 164 ~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ga 210 (333)
.++.++ ++....+++++++|.+.-| +-.++.+.+.+...++.++
T Consensus 81 -~~~~~l-~~l~~~l~~~~~iv~l~nG-i~~~~~l~~~~~~~~v~~~ 124 (312)
T 3hn2_A 81 -ANSRYE-ELIRPLVEEGTQILTLQNG-LGNEEALATLFGAERIIGG 124 (312)
T ss_dssp -GGGGHH-HHHGGGCCTTCEEEECCSS-SSHHHHHHHHTCGGGEEEE
T ss_pred -CcHHHH-HHHHhhcCCCCEEEEecCC-CCcHHHHHHHCCCCcEEEE
Confidence 444443 4455668899999998766 3345677777765555443
No 149
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.28 E-value=2.1e-06 Score=80.51 Aligned_cols=94 Identities=18% Similarity=0.166 Sum_probs=66.6
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCCH--HHHHhcCc---ccc---ChhhhccCCCEEEEecCCch
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVSV--EDAAKLNI---ASL---GLEDIWPLADYITVHTPLIP 164 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~--~~a~~~gv---~~~---~l~ell~~aDvV~l~~P~t~ 164 (333)
.++.|++++|+|.|.+|+.++..|...|. +|++++|+... +.+++.+. ... ++.+.+.++|+|+.++|...
T Consensus 137 ~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~ 216 (297)
T 2egg_A 137 ITLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGM 216 (297)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTC
T ss_pred CCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCC
Confidence 45789999999999999999999999998 99999997532 22333333 222 45677889999999999643
Q ss_pred hhH--h-hccHHHHhccCCCcEEEEccCC
Q psy6348 165 QTK--N-LINAEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 165 ~t~--~-li~~~~~~~mk~gailIN~aRg 190 (333)
... . .+. .+.++++.+++|+.-.
T Consensus 217 ~~~~~~~~i~---~~~l~~~~~v~D~~y~ 242 (297)
T 2egg_A 217 HPRVEVQPLS---LERLRPGVIVSDIIYN 242 (297)
T ss_dssp SSCCSCCSSC---CTTCCTTCEEEECCCS
T ss_pred CCCCCCCCCC---HHHcCCCCEEEEcCCC
Confidence 210 0 122 2346677777777663
No 150
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=98.28 E-value=2.7e-07 Score=85.30 Aligned_cols=86 Identities=13% Similarity=0.025 Sum_probs=56.1
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEE-EEEcCCCCH-HHH-HhcCccccChhhhccCCCEEEEecCCchhhHhhccHHHH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKV-IGFDPMVSV-EDA-AKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINAEVL 175 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V-~~~d~~~~~-~~a-~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~ 175 (333)
.+|||||+|+||+.+|+.|... ++| .+||+.... +.. +..|....+++++++++|+|++++|... ...+ +
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~DvVilav~~~~-~~~v-----~ 75 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDRY-IKTV-----A 75 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCTTT-HHHH-----H
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCCccCCHHHHHhcCCEEEEeCChHH-HHHH-----H
Confidence 4799999999999999999877 888 489986522 222 3446522368888999999999999543 2333 3
Q ss_pred hcc-CCCcEEEEccCCc
Q psy6348 176 KKC-KKGVRVVNVARGG 191 (333)
Q Consensus 176 ~~m-k~gailIN~aRg~ 191 (333)
..+ +++.++||++-+-
T Consensus 76 ~~l~~~~~ivi~~s~~~ 92 (276)
T 2i76_A 76 NHLNLGDAVLVHCSGFL 92 (276)
T ss_dssp TTTCCSSCCEEECCSSS
T ss_pred HHhccCCCEEEECCCCC
Confidence 333 6889999998553
No 151
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.27 E-value=8e-07 Score=82.84 Aligned_cols=95 Identities=18% Similarity=0.127 Sum_probs=63.5
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCCHHHHHhcCccc---cChhhhccCCCEEEEecCCch--hh
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVSVEDAAKLNIAS---LGLEDIWPLADYITVHTPLIP--QT 166 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a~~~gv~~---~~l~ell~~aDvV~l~~P~t~--~t 166 (333)
+.++.||++.|+|.|.+|+.++..|...|. +|++++|+..........+.. .++.++++++|+|+.++|..- ..
T Consensus 112 ~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~ 191 (277)
T 3don_A 112 YEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNT 191 (277)
T ss_dssp STTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCC
Confidence 346789999999999999999999999999 899999975332111112222 246677889999999999531 11
Q ss_pred HhhccHHHHhccCCCcEEEEccCC
Q psy6348 167 KNLINAEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 167 ~~li~~~~~~~mk~gailIN~aRg 190 (333)
...+. .+.++++.+++++.-.
T Consensus 192 ~~~l~---~~~l~~~~~V~D~vY~ 212 (277)
T 3don_A 192 DSVIS---LNRLASHTLVSDIVYN 212 (277)
T ss_dssp CCSSC---CTTCCSSCEEEESCCS
T ss_pred cCCCC---HHHcCCCCEEEEecCC
Confidence 11121 2445666666666554
No 152
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=98.26 E-value=3.2e-06 Score=79.74 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=72.0
Q ss_pred cCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCccc-------------c-ChhhhccCCCEEEEec
Q psy6348 96 LYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIAS-------------L-GLEDIWPLADYITVHT 160 (333)
Q Consensus 96 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~-------------~-~l~ell~~aDvV~l~~ 160 (333)
...++|+|||.|.||..+|..|...|.+|..| ++. ..+...+.|... . ++++ +..+|+|++++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vilav 94 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFCV 94 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEECC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEEc
Confidence 34679999999999999999999999999999 654 223334444321 1 3443 58999999999
Q ss_pred CCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhh
Q psy6348 161 PLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLK 203 (333)
Q Consensus 161 P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~ 203 (333)
|.. .++.++ ++....+++++++|.+.-| +-.++.+.+.+.
T Consensus 95 k~~-~~~~~l-~~l~~~l~~~~~iv~~~nG-i~~~~~l~~~~~ 134 (318)
T 3hwr_A 95 KST-DTQSAA-LAMKPALAKSALVLSLQNG-VENADTLRSLLE 134 (318)
T ss_dssp CGG-GHHHHH-HHHTTTSCTTCEEEEECSS-SSHHHHHHHHCC
T ss_pred ccc-cHHHHH-HHHHHhcCCCCEEEEeCCC-CCcHHHHHHHcC
Confidence 954 555554 4455678899999998666 333356666664
No 153
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.26 E-value=1.8e-06 Score=81.14 Aligned_cols=81 Identities=26% Similarity=0.287 Sum_probs=67.4
Q ss_pred ccccCCCEEEEEecCh-HHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChh--hhccCCCEEEEecCCchhhHhh
Q psy6348 93 GTELYGKTLAVLGLGR-IGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLE--DIWPLADYITVHTPLIPQTKNL 169 (333)
Q Consensus 93 g~~l~gktvGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~--ell~~aDvV~l~~P~t~~t~~l 169 (333)
+.++.||++.|||.|. +|+.+|..|...|++|+.++++.. +++ +.+++||+|+.++|. .++
T Consensus 160 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~------------~l~l~~~~~~ADIVI~Avg~----p~~ 223 (300)
T 4a26_A 160 GIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS------------TEDMIDYLRTADIVIAAMGQ----PGY 223 (300)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC------------HHHHHHHHHTCSEEEECSCC----TTC
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC------------CchhhhhhccCCEEEECCCC----CCC
Confidence 4679999999999988 799999999999999999987432 344 889999999999984 345
Q ss_pred ccHHHHhccCCCcEEEEccCCcc
Q psy6348 170 INAEVLKKCKKGVRVVNVARGGI 192 (333)
Q Consensus 170 i~~~~~~~mk~gailIN~aRg~~ 192 (333)
+..+. +|+|+++||++.-.+
T Consensus 224 I~~~~---vk~GavVIDvgi~~~ 243 (300)
T 4a26_A 224 VKGEW---IKEGAAVVDVGTTPV 243 (300)
T ss_dssp BCGGG---SCTTCEEEECCCEEE
T ss_pred CcHHh---cCCCcEEEEEeccCC
Confidence 66544 699999999987654
No 154
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.23 E-value=2.8e-06 Score=79.32 Aligned_cols=80 Identities=23% Similarity=0.286 Sum_probs=67.5
Q ss_pred ccccCCCEEEEEecCh-HHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhcc
Q psy6348 93 GTELYGKTLAVLGLGR-IGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 93 g~~l~gktvGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 171 (333)
+.++.||++.|||.|. +|+.+|..|...|++|+.++++. .++++.+++||+|+.+++. .+++.
T Consensus 156 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~----p~~I~ 219 (285)
T 3l07_A 156 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT------------TDLKSHTTKADILIVAVGK----PNFIT 219 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHTTCSEEEECCCC----TTCBC
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc------------hhHHHhcccCCEEEECCCC----CCCCC
Confidence 4679999999999988 69999999999999999998642 2688899999999999983 34566
Q ss_pred HHHHhccCCCcEEEEccCCc
Q psy6348 172 AEVLKKCKKGVRVVNVARGG 191 (333)
Q Consensus 172 ~~~~~~mk~gailIN~aRg~ 191 (333)
.+. +|+|+++||++.-.
T Consensus 220 ~~~---vk~GavVIDvgi~~ 236 (285)
T 3l07_A 220 ADM---VKEGAVVIDVGINH 236 (285)
T ss_dssp GGG---SCTTCEEEECCCEE
T ss_pred HHH---cCCCcEEEEecccC
Confidence 544 59999999998665
No 155
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.21 E-value=7.4e-06 Score=66.41 Aligned_cols=88 Identities=17% Similarity=0.235 Sum_probs=58.9
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHH-hcCcccc-----Ch---h-hhccCCCEEEEecCCchhh
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAA-KLNIASL-----GL---E-DIWPLADYITVHTPLIPQT 166 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~-~~gv~~~-----~l---~-ell~~aDvV~l~~P~t~~t 166 (333)
+++++|+|+|.+|+.+|+.|...|++|+++|+.... +... ..++... +. . ..+.++|+|++++|.....
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 578999999999999999999999999999986522 2222 2354321 22 2 2267899999999864332
Q ss_pred HhhccHHHHhccCCCcEEEEc
Q psy6348 167 KNLINAEVLKKCKKGVRVVNV 187 (333)
Q Consensus 167 ~~li~~~~~~~mk~gailIN~ 187 (333)
..-......++++.+++-+
T Consensus 84 --~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 84 --LMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp --HHHHHHHHHTTCCCEEEEC
T ss_pred --HHHHHHHHHcCCCEEEEEe
Confidence 2223344557777666543
No 156
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.21 E-value=4.4e-06 Score=78.51 Aligned_cols=82 Identities=17% Similarity=0.212 Sum_probs=68.4
Q ss_pred ccccCCCEEEEEecCh-HHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhcc
Q psy6348 93 GTELYGKTLAVLGLGR-IGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 93 g~~l~gktvGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 171 (333)
+.++.|+++.|||.|+ +|+.+|+.|...|.+|+.++++. .++.+.+++||+|+.+++. .+++.
T Consensus 160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~----p~~I~ 223 (301)
T 1a4i_A 160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT------------AHLDEEVNKGDILVVATGQ----PEMVK 223 (301)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHTTCSEEEECCCC----TTCBC
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc------------ccHHHHhccCCEEEECCCC----cccCC
Confidence 5689999999999996 79999999999999999998542 3688899999999999985 33576
Q ss_pred HHHHhccCCCcEEEEccCCccc
Q psy6348 172 AEVLKKCKKGVRVVNVARGGIV 193 (333)
Q Consensus 172 ~~~~~~mk~gailIN~aRg~~v 193 (333)
.+. +|+|+++||++...+-
T Consensus 224 ~~~---vk~GavVIDVgi~~~~ 242 (301)
T 1a4i_A 224 GEW---IKPGAIVIDCGINYVP 242 (301)
T ss_dssp GGG---SCTTCEEEECCCBC--
T ss_pred HHH---cCCCcEEEEccCCCcc
Confidence 655 5899999999987644
No 157
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.21 E-value=3.2e-06 Score=78.93 Aligned_cols=81 Identities=27% Similarity=0.323 Sum_probs=68.3
Q ss_pred ccccCCCEEEEEecCh-HHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhcc
Q psy6348 93 GTELYGKTLAVLGLGR-IGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 93 g~~l~gktvGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 171 (333)
+.++.||++.|||.|. +|+.+|..|...|++|+.++++. .++++.+++||+|+.+++. .+++.
T Consensus 155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t------------~~L~~~~~~ADIVI~Avg~----p~~I~ 218 (285)
T 3p2o_A 155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT------------KDLSLYTRQADLIIVAAGC----VNLLR 218 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHTTCSEEEECSSC----TTCBC
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc------------hhHHHHhhcCCEEEECCCC----CCcCC
Confidence 5679999999999988 69999999999999999998642 3678899999999999983 34566
Q ss_pred HHHHhccCCCcEEEEccCCcc
Q psy6348 172 AEVLKKCKKGVRVVNVARGGI 192 (333)
Q Consensus 172 ~~~~~~mk~gailIN~aRg~~ 192 (333)
.+. +|+|+++||++.-.+
T Consensus 219 ~~~---vk~GavVIDVgi~~~ 236 (285)
T 3p2o_A 219 SDM---VKEGVIVVDVGINRL 236 (285)
T ss_dssp GGG---SCTTEEEEECCCEEC
T ss_pred HHH---cCCCeEEEEeccCcc
Confidence 544 599999999987653
No 158
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.21 E-value=2.3e-06 Score=70.82 Aligned_cols=89 Identities=10% Similarity=0.243 Sum_probs=62.5
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCcccc--C------hhhh-ccCCCEEEEecCCchhhH
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASL--G------LEDI-WPLADYITVHTPLIPQTK 167 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~--~------l~el-l~~aDvV~l~~P~t~~t~ 167 (333)
.+++.|+|+|++|+.+|+.|+..|++|+++|+... .+.+++.|+..+ + ++++ +.++|+|++++|....+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~ 86 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAG 86 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHH
Confidence 35799999999999999999999999999999763 234455676432 1 2222 568999999999665544
Q ss_pred hhccHHHHhccCCCcEEEEcc
Q psy6348 168 NLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 168 ~li~~~~~~~mk~gailIN~a 188 (333)
.++ .....+.++..+|-.+
T Consensus 87 ~~~--~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 87 EIV--ASARAKNPDIEIIARA 105 (140)
T ss_dssp HHH--HHHHHHCSSSEEEEEE
T ss_pred HHH--HHHHHHCCCCeEEEEE
Confidence 332 2445556666666543
No 159
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.20 E-value=2.2e-06 Score=80.03 Aligned_cols=81 Identities=19% Similarity=0.287 Sum_probs=68.5
Q ss_pred ccccCCCEEEEEecCh-HHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhcc
Q psy6348 93 GTELYGKTLAVLGLGR-IGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 93 g~~l~gktvGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 171 (333)
+.++.||++.|||.|. +|+.+|+.|...|.+|+.++++. .++.+.+++||+|+.+++. .+++.
T Consensus 154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~----p~lI~ 217 (288)
T 1b0a_A 154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT------------KNLRHHVENADLLIVAVGK----PGFIP 217 (288)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC------------SCHHHHHHHCSEEEECSCC----TTCBC
T ss_pred CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc------------hhHHHHhccCCEEEECCCC----cCcCC
Confidence 5689999999999997 69999999999999999998643 3678889999999999983 23566
Q ss_pred HHHHhccCCCcEEEEccCCcc
Q psy6348 172 AEVLKKCKKGVRVVNVARGGI 192 (333)
Q Consensus 172 ~~~~~~mk~gailIN~aRg~~ 192 (333)
.+. +|+|+++||++...+
T Consensus 218 ~~~---vk~GavVIDVgi~r~ 235 (288)
T 1b0a_A 218 GDW---IKEGAIVIDVGINRL 235 (288)
T ss_dssp TTT---SCTTCEEEECCCEEC
T ss_pred HHH---cCCCcEEEEccCCcc
Confidence 655 599999999997664
No 160
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.20 E-value=3.7e-06 Score=78.47 Aligned_cols=81 Identities=28% Similarity=0.382 Sum_probs=68.1
Q ss_pred ccccCCCEEEEEecCh-HHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhcc
Q psy6348 93 GTELYGKTLAVLGLGR-IGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 93 g~~l~gktvGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 171 (333)
+.++.||++.|||.|. +|+.+|..|...|++|+.++++. .++++.+++||+|+.++|. .+++.
T Consensus 156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T------------~~L~~~~~~ADIVI~Avg~----p~~I~ 219 (286)
T 4a5o_A 156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT------------RDLADHVSRADLVVVAAGK----PGLVK 219 (286)
T ss_dssp TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHHTCSEEEECCCC----TTCBC
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC------------cCHHHHhccCCEEEECCCC----CCCCC
Confidence 5689999999999987 79999999999999999997642 2578889999999999984 34566
Q ss_pred HHHHhccCCCcEEEEccCCcc
Q psy6348 172 AEVLKKCKKGVRVVNVARGGI 192 (333)
Q Consensus 172 ~~~~~~mk~gailIN~aRg~~ 192 (333)
.+. +|+|+++||++.-.+
T Consensus 220 ~~~---vk~GavVIDvgi~~~ 237 (286)
T 4a5o_A 220 GEW---IKEGAIVIDVGINRQ 237 (286)
T ss_dssp GGG---SCTTCEEEECCSCSS
T ss_pred HHH---cCCCeEEEEeccccc
Confidence 554 599999999987653
No 161
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.20 E-value=3.7e-06 Score=78.31 Aligned_cols=81 Identities=20% Similarity=0.291 Sum_probs=68.2
Q ss_pred ccccCCCEEEEEecChH-HHHHHHHHhhC--CCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEecCCchhhHhh
Q psy6348 93 GTELYGKTLAVLGLGRI-GREVALRMQAF--GMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNL 169 (333)
Q Consensus 93 g~~l~gktvGIIGlG~I-G~~vA~~l~~~--G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~l 169 (333)
+.++.||++.|||.|.| |+.+|+.|... |.+|+.++++. .++.+.+++||+|+.+++. .++
T Consensus 153 ~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t------------~~L~~~~~~ADIVI~Avg~----p~~ 216 (281)
T 2c2x_A 153 DISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT------------RDLPALTRQADIVVAAVGV----AHL 216 (281)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC------------SCHHHHHTTCSEEEECSCC----TTC
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch------------hHHHHHHhhCCEEEECCCC----Ccc
Confidence 56899999999999985 99999999999 89999997643 3688899999999999983 235
Q ss_pred ccHHHHhccCCCcEEEEccCCcc
Q psy6348 170 INAEVLKKCKKGVRVVNVARGGI 192 (333)
Q Consensus 170 i~~~~~~~mk~gailIN~aRg~~ 192 (333)
+..+. +|+|+++||++...+
T Consensus 217 I~~~~---vk~GavVIDVgi~r~ 236 (281)
T 2c2x_A 217 LTADM---VRPGAAVIDVGVSRT 236 (281)
T ss_dssp BCGGG---SCTTCEEEECCEEEE
T ss_pred cCHHH---cCCCcEEEEccCCCC
Confidence 76655 589999999987654
No 162
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.18 E-value=2.9e-06 Score=78.81 Aligned_cols=77 Identities=13% Similarity=0.176 Sum_probs=65.8
Q ss_pred cCCCEEEEEecCh-HHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhccHHH
Q psy6348 96 LYGKTLAVLGLGR-IGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINAEV 174 (333)
Q Consensus 96 l~gktvGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~ 174 (333)
+.||++.|||.|. +|+.+|..|.+.|++|+.++++. .++++.+++||+|+.++|. .+++..+.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 211 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT------------KDIGSMTRSSKIVVVAVGR----PGFLNREM 211 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHHHSSEEEECSSC----TTCBCGGG
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc------------ccHHHhhccCCEEEECCCC----CccccHhh
Confidence 8999999999986 89999999999999999998642 3678899999999999984 33566654
Q ss_pred HhccCCCcEEEEccCCc
Q psy6348 175 LKKCKKGVRVVNVARGG 191 (333)
Q Consensus 175 ~~~mk~gailIN~aRg~ 191 (333)
+|+|+++||++.-.
T Consensus 212 ---vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 212 ---VTPGSVVIDVGINY 225 (276)
T ss_dssp ---CCTTCEEEECCCEE
T ss_pred ---ccCCcEEEEeccCc
Confidence 59999999998765
No 163
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.16 E-value=3.8e-06 Score=77.15 Aligned_cols=102 Identities=20% Similarity=0.210 Sum_probs=73.7
Q ss_pred ccCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCCHHHHHhc----Cc-cccChhhhccCCCEEEEecCCchhh-H
Q psy6348 95 ELYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVSVEDAAKL----NI-ASLGLEDIWPLADYITVHTPLIPQT-K 167 (333)
Q Consensus 95 ~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a~~~----gv-~~~~l~ell~~aDvV~l~~P~t~~t-~ 167 (333)
.+.| +++|||.|.+|++++..|...|. +|++++|+. +.++++ +. ...++.+.++++|+|+.++|..-.. .
T Consensus 106 ~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~--~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~ 182 (253)
T 3u62_A 106 EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI--ERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEE 182 (253)
T ss_dssp CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH--HHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCC
T ss_pred CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH--HHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCC
Confidence 3578 99999999999999999999999 899999954 444433 21 2235678889999999999853211 1
Q ss_pred hhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcC
Q psy6348 168 NLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCG 205 (333)
Q Consensus 168 ~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g 205 (333)
..+..+ .++++.+++++.-+ .+.-|.++.+.|
T Consensus 183 ~~i~~~---~l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 183 LPVSDD---SLKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp CSCCHH---HHTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred CCCCHH---HhCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 233333 35789999999888 555555666655
No 164
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.15 E-value=6.2e-06 Score=64.85 Aligned_cols=87 Identities=17% Similarity=0.242 Sum_probs=60.3
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCC-CEEEEEcCCCCH-HHHHhcCcccc--------ChhhhccCCCEEEEecCCchhh
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFG-MKVIGFDPMVSV-EDAAKLNIASL--------GLEDIWPLADYITVHTPLIPQT 166 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G-~~V~~~d~~~~~-~~a~~~gv~~~--------~l~ell~~aDvV~l~~P~t~~t 166 (333)
.+++++|+|.|.||+.+++.|...| ++|+++|+.... +.....++... ++.++++++|+|+.++|... +
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~-~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL-T 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG-H
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh-h
Confidence 3579999999999999999999999 899999996532 22333444321 35567889999999998432 2
Q ss_pred HhhccHHHHhccCCCcEEEEcc
Q psy6348 167 KNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 167 ~~li~~~~~~~mk~gailIN~a 188 (333)
..++. ...+.|...++.+
T Consensus 83 ~~~~~----~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 83 PIIAK----AAKAAGAHYFDLT 100 (118)
T ss_dssp HHHHH----HHHHTTCEEECCC
T ss_pred HHHHH----HHHHhCCCEEEec
Confidence 22221 2235677777764
No 165
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=98.14 E-value=5.1e-06 Score=82.25 Aligned_cols=139 Identities=18% Similarity=0.215 Sum_probs=84.5
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHh--------------------cC-cccc-ChhhhccCCC
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAK--------------------LN-IASL-GLEDIWPLAD 154 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~--------------------~g-v~~~-~l~ell~~aD 154 (333)
+-++|+|||+|.+|..+|..+...|++|++||.....-.... .| ..+. +.++.++.||
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad 99 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATD 99 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSS
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCC
Confidence 446999999999999999999999999999997542211111 11 2222 5778899999
Q ss_pred EEEEecCCchh------hHhhcc--HHHHhccC---CCcEEEEccCCcccchHhHHh-hhhcCCceEEEecc-CCCCCCC
Q psy6348 155 YITVHTPLIPQ------TKNLIN--AEVLKKCK---KGVRVVNVARGGIVDENALLD-SLKCGHCGGAALDV-FCEEPPK 221 (333)
Q Consensus 155 vV~l~~P~t~~------t~~li~--~~~~~~mk---~gailIN~aRg~~vd~~aL~~-aL~~g~i~gaalDV-~~~EP~~ 221 (333)
++++|+|.... ...+.. +..-+.|+ +|.++|.-|+-.+=..+.+.. .|++.. .+.-++| |.+|-..
T Consensus 100 ~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~-~~~~f~v~~~PErl~ 178 (444)
T 3vtf_A 100 ATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEA-GGVKFSVASNPEFLR 178 (444)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTT-TTCCCEEEECCCCCC
T ss_pred ceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhC-CCCCceeecCccccc
Confidence 99999983211 111211 22334454 688999999977766666543 333322 1111221 4455422
Q ss_pred C-ccchhhcCCCcEEE
Q psy6348 222 S-EQTFELIKHPKVIV 236 (333)
Q Consensus 222 ~-~~~~~L~~~pnvi~ 236 (333)
+ ...+.+...|+|++
T Consensus 179 eG~a~~d~~~~~riVi 194 (444)
T 3vtf_A 179 EGSALEDFFKPDRIVI 194 (444)
T ss_dssp TTSHHHHHHSCSCEEE
T ss_pred CCccccccccCCcEEE
Confidence 1 11245667777763
No 166
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.13 E-value=1.6e-06 Score=82.42 Aligned_cols=92 Identities=25% Similarity=0.283 Sum_probs=68.9
Q ss_pred CccccCCCEEEEEecChH-HHHHHHHHhhCCCEEEEEcCCCC--HHHHHhcCc---cc--------cChhhhccCCCEEE
Q psy6348 92 TGTELYGKTLAVLGLGRI-GREVALRMQAFGMKVIGFDPMVS--VEDAAKLNI---AS--------LGLEDIWPLADYIT 157 (333)
Q Consensus 92 ~g~~l~gktvGIIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~--~~~a~~~gv---~~--------~~l~ell~~aDvV~ 157 (333)
.|.++.|+++.|||.|.| |+.+|+.|.+.|.+|+.+|++.. .+.+..++. .. .++++.+++||+|+
T Consensus 171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVI 250 (320)
T 1edz_A 171 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVI 250 (320)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred cCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEE
Confidence 466899999999999975 99999999999999999988521 011111111 11 35788999999999
Q ss_pred EecCCchhhHhh-ccHHHHhccCCCcEEEEccCC
Q psy6348 158 VHTPLIPQTKNL-INAEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 158 l~~P~t~~t~~l-i~~~~~~~mk~gailIN~aRg 190 (333)
.+++. .++ |..+. +|+|+++||+|..
T Consensus 251 sAtg~----p~~vI~~e~---vk~GavVIDVgi~ 277 (320)
T 1edz_A 251 TGVPS----ENYKFPTEY---IKEGAVCINFACT 277 (320)
T ss_dssp ECCCC----TTCCBCTTT---SCTTEEEEECSSS
T ss_pred ECCCC----CcceeCHHH---cCCCeEEEEcCCC
Confidence 99974 233 65555 5899999999764
No 167
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.12 E-value=7.6e-06 Score=77.44 Aligned_cols=90 Identities=22% Similarity=0.260 Sum_probs=67.8
Q ss_pred CCCEEEEEecChHHHHHHHHHhh-CC-CEEEEEcCCCCHHHHHh----cCcc--ccChhhhccCCCEEEEecCCchhhHh
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQA-FG-MKVIGFDPMVSVEDAAK----LNIA--SLGLEDIWPLADYITVHTPLIPQTKN 168 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~-~G-~~V~~~d~~~~~~~a~~----~gv~--~~~l~ell~~aDvV~l~~P~t~~t~~ 168 (333)
..++++|||.|.+|+.+++.+.. ++ -+|.+||++...+.+++ .|+. .+++++++++||+|++|+|.. ..
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~a~~la~~l~~~~g~~~~~~~~~eav~~aDIVi~aT~s~---~p 196 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPYASPEILERIGRRCGVPARMAAPADIAAQADIVVTATRST---TP 196 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTTCCHHHHHHHHHHHTSCEEECCHHHHHHHCSEEEECCCCS---SC
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCcHHHHHHHHHHHhcCCeEEEeCHHHHHhhCCEEEEccCCC---Cc
Confidence 35799999999999999998875 34 58999999832333332 3553 348999999999999999854 34
Q ss_pred hccHHHHhccCCCcEEEEccCCcc
Q psy6348 169 LINAEVLKKCKKGVRVVNVARGGI 192 (333)
Q Consensus 169 li~~~~~~~mk~gailIN~aRg~~ 192 (333)
++.. +.+++|+.+++++....
T Consensus 197 vl~~---~~l~~G~~V~~vGs~~p 217 (313)
T 3hdj_A 197 LFAG---QALRAGAFVGAIGSSLP 217 (313)
T ss_dssp SSCG---GGCCTTCEEEECCCSST
T ss_pred ccCH---HHcCCCcEEEECCCCCC
Confidence 5543 45899999999987543
No 168
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.11 E-value=8.8e-06 Score=66.85 Aligned_cols=87 Identities=15% Similarity=0.108 Sum_probs=57.8
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCcccc-----C---hhhh-ccCCCEEEEecCCchhh
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASL-----G---LEDI-WPLADYITVHTPLIPQT 166 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~-----~---l~el-l~~aDvV~l~~P~t~~t 166 (333)
.++++.|+|+|.+|+.+|+.|...|++|+++|+... .+...+.++... + ++++ +.++|+|++++|..+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~-- 82 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDE-- 82 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHH--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHH--
Confidence 457899999999999999999999999999998652 233444565422 1 2222 468999999999432
Q ss_pred HhhccHHHHhccCCCcEEE
Q psy6348 167 KNLINAEVLKKCKKGVRVV 185 (333)
Q Consensus 167 ~~li~~~~~~~mk~gailI 185 (333)
.++.-......+....+++
T Consensus 83 ~n~~~~~~a~~~~~~~iia 101 (141)
T 3llv_A 83 FNLKILKALRSVSDVYAIV 101 (141)
T ss_dssp HHHHHHHHHHHHCCCCEEE
T ss_pred HHHHHHHHHHHhCCceEEE
Confidence 3333334444455333444
No 169
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=98.06 E-value=1.3e-05 Score=75.28 Aligned_cols=104 Identities=14% Similarity=0.083 Sum_probs=70.0
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCccccC----------h-hhhccCCCEEEEecCCchhh
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASLG----------L-EDIWPLADYITVHTPLIPQT 166 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~~----------l-~ell~~aDvV~l~~P~t~~t 166 (333)
++|+|||.|.||..+|..|. .|.+|.+|++... .+..++.|+...+ . ++....+|+|++++|. ..+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~-~~~ 80 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQ-HQL 80 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCG-GGH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCH-HHH
Confidence 58999999999999999999 8999999999652 3444555654321 1 3567889999999984 344
Q ss_pred HhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 167 KNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 167 ~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
..++ +.++.+.++. +|.+.-| +-.++.+.+.+...++.
T Consensus 81 ~~~l--~~l~~~~~~~-ivs~~nG-i~~~e~l~~~~~~~~vl 118 (307)
T 3ego_A 81 QSVF--SSLERIGKTN-ILFLQNG-MGHIHDLKDWHVGHSIY 118 (307)
T ss_dssp HHHH--HHTTSSCCCE-EEECCSS-SHHHHHHHTCCCSCEEE
T ss_pred HHHH--HHhhcCCCCe-EEEecCC-ccHHHHHHHhCCCCcEE
Confidence 4444 2334445666 7777655 33344555555544443
No 170
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=98.06 E-value=5.8e-06 Score=77.09 Aligned_cols=71 Identities=17% Similarity=0.129 Sum_probs=55.8
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCCH--HHHHhcC----ccccChhhhccCCCEEEEecCCc
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVSV--EDAAKLN----IASLGLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~--~~a~~~g----v~~~~l~ell~~aDvV~l~~P~t 163 (333)
+.++.||++.|+|.|.+|+.++..|...|. +|.+++|.... +.+++.+ +...+++++..++|+|+.++|..
T Consensus 121 ~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~g 198 (281)
T 3o8q_A 121 QVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSAS 198 (281)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCC
T ss_pred CCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCC
Confidence 456899999999999999999999999997 99999997532 2222222 33446777778999999999954
No 171
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=98.04 E-value=1.3e-05 Score=73.96 Aligned_cols=71 Identities=17% Similarity=0.133 Sum_probs=52.8
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH--HHHHhcC----ccccChhhhcc-CCCEEEEecCCc
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV--EDAAKLN----IASLGLEDIWP-LADYITVHTPLI 163 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~g----v~~~~l~ell~-~aDvV~l~~P~t 163 (333)
+.++.||++.|+|.|.+|++++..|...|.+|++++|+... +.+++.+ +...+++++.+ ++|+|+.++|..
T Consensus 114 ~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~ 191 (272)
T 1p77_A 114 NWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAG 191 (272)
T ss_dssp TCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC-
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCC
Confidence 34678999999999999999999999999999999997532 2222222 22235555544 899999999954
No 172
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.03 E-value=9.1e-06 Score=78.43 Aligned_cols=108 Identities=17% Similarity=0.085 Sum_probs=72.4
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHH-HHh-cC-cc-----ccChhhhccCCCEEEEecCCchh
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVED-AAK-LN-IA-----SLGLEDIWPLADYITVHTPLIPQ 165 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~-a~~-~g-v~-----~~~l~ell~~aDvV~l~~P~t~~ 165 (333)
.|-++++++|+|+|.||+.+|+.|... .+|.++|++..... ..+ .+ +. ..+++++++++|+|+.++|....
T Consensus 12 ~~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~ 90 (365)
T 2z2v_A 12 IEGRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLG 90 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHH
T ss_pred ccCCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhh
Confidence 455689999999999999999999887 89999999653221 111 11 11 12577889999999999984322
Q ss_pred hHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 166 TKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 166 t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
. .+ ..+.++.|..+++++-. .-+..+|.+..++..+.
T Consensus 91 ~-~v----~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~~ 127 (365)
T 2z2v_A 91 F-KS----IKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQVT 127 (365)
T ss_dssp H-HH----HHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTCE
T ss_pred H-HH----HHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCCE
Confidence 1 12 23456789999998753 33445677766666553
No 173
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=98.03 E-value=1.9e-05 Score=73.34 Aligned_cols=70 Identities=17% Similarity=0.161 Sum_probs=53.8
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCCH--HHHHhcC---ccccChhhhc-cCCCEEEEecCC
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVSV--EDAAKLN---IASLGLEDIW-PLADYITVHTPL 162 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~--~~a~~~g---v~~~~l~ell-~~aDvV~l~~P~ 162 (333)
+.++.||++.|+|.|.+|+.++..|...|. +|++++|+... +.+++.+ +...+++++- .++|+|+.++|.
T Consensus 115 ~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~ 191 (272)
T 3pwz_A 115 GEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSA 191 (272)
T ss_dssp CCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSG
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCC
Confidence 456889999999999999999999999996 99999997532 2223333 3334556554 789999999984
No 174
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.03 E-value=1e-05 Score=77.75 Aligned_cols=90 Identities=18% Similarity=0.224 Sum_probs=65.6
Q ss_pred CCCEEEEEecChHHHHHHHHHh-hCC-CEEEEEcCCCCH-H-HHHhc----Cc--cc-cChhhhccCCCEEEEecCCchh
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQ-AFG-MKVIGFDPMVSV-E-DAAKL----NI--AS-LGLEDIWPLADYITVHTPLIPQ 165 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~-~~G-~~V~~~d~~~~~-~-~a~~~----gv--~~-~~l~ell~~aDvV~l~~P~t~~ 165 (333)
..++++|||.|.+|+.+++.+. ..+ .+|.+||+.... + .++++ |+ .. .++++++++||+|++|+|...
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~- 206 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA- 206 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS-
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCC-
Confidence 4679999999999999998764 344 589999997522 2 22232 53 22 378899999999999999652
Q ss_pred hHhhccHHHHhccCCCcEEEEccCC
Q psy6348 166 TKNLINAEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 166 t~~li~~~~~~~mk~gailIN~aRg 190 (333)
...++.. +.+++|..+++++..
T Consensus 207 ~~pvl~~---~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 207 YATIITP---DMLEPGMHLNAVGGD 228 (350)
T ss_dssp EEEEECG---GGCCTTCEEEECSCC
T ss_pred CCceecH---HHcCCCCEEEECCCC
Confidence 2344443 457999999999864
No 175
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.02 E-value=7e-06 Score=66.76 Aligned_cols=93 Identities=20% Similarity=0.271 Sum_probs=58.6
Q ss_pred cCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhcCcccc-----C---hhhh-ccCCCEEEEecCCchh
Q psy6348 96 LYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKLNIASL-----G---LEDI-WPLADYITVHTPLIPQ 165 (333)
Q Consensus 96 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~gv~~~-----~---l~el-l~~aDvV~l~~P~t~~ 165 (333)
+.++++.|+|+|.+|+.+++.|...|++|+++|+.... +...+.+.... + ++++ +.++|+|+.++|...+
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 56789999999999999999999999999999985422 22222343221 1 2333 6789999999986422
Q ss_pred hHhhccHHHHhccCCCcEEEEccCC
Q psy6348 166 TKNLINAEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 166 t~~li~~~~~~~mk~gailIN~aRg 190 (333)
+ +..-......+.+. .+|-.+.+
T Consensus 84 ~-~~~~~~~~~~~~~~-~ii~~~~~ 106 (144)
T 2hmt_A 84 A-STLTTLLLKELDIP-NIWVKAQN 106 (144)
T ss_dssp H-HHHHHHHHHHTTCS-EEEEECCS
T ss_pred H-HHHHHHHHHHcCCC-eEEEEeCC
Confidence 2 22223334445565 55544444
No 176
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.01 E-value=2e-05 Score=74.22 Aligned_cols=111 Identities=14% Similarity=0.157 Sum_probs=71.6
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCCHHHHH--h-------c----Cccc-cChhhhccCCCEEEEecCC
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVSVEDAA--K-------L----NIAS-LGLEDIWPLADYITVHTPL 162 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a~--~-------~----gv~~-~~l~ell~~aDvV~l~~P~ 162 (333)
.++|+|||.|.||..+|..+...|+ +|+.||+........ + . .+.. .++ +.+++||+|+++++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 4689999999999999999998898 999999876432111 0 0 1222 245 678999999999932
Q ss_pred --------------chhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhh--cCCceEE
Q psy6348 163 --------------IPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLK--CGHCGGA 210 (333)
Q Consensus 163 --------------t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~--~g~i~ga 210 (333)
+.....-+-++.-+ ..+++++|+++...-+....+.+... ..++.|.
T Consensus 83 p~~~g~~r~d~~~~~~~i~~~i~~~i~~-~~~~~iii~~sNp~~~~~~~~~~~~~~~~~rviG~ 145 (317)
T 2ewd_A 83 PGRPKDDRSELLFGNARILDSVAEGVKK-YCPNAFVICITNPLDVMVSHFQKVSGLPHNKVCGM 145 (317)
T ss_dssp SSCCSSCGGGGHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSHHHHHHHHHHHHCCCGGGEEES
T ss_pred CCCCCCcHHHHHHhhHHHHHHHHHHHHH-HCCCcEEEEeCChHHHHHHHHHHhhCCCHHHEEec
Confidence 11111111122223 35699999998876565666666542 2345444
No 177
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.00 E-value=1.2e-05 Score=77.99 Aligned_cols=87 Identities=13% Similarity=0.084 Sum_probs=61.8
Q ss_pred CEEEEEecChHHHHHHHHHhh-CCCEEEEEcCCC-CHH---H-HHhcC------------cc-------c-cChhhhccC
Q psy6348 99 KTLAVLGLGRIGREVALRMQA-FGMKVIGFDPMV-SVE---D-AAKLN------------IA-------S-LGLEDIWPL 152 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~-~G~~V~~~d~~~-~~~---~-a~~~g------------v~-------~-~~l~ell~~ 152 (333)
++|+|||.|.||..+|..|.. .|++|.+||++. +.+ . .++.| .. . .+++++++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 489999999999999999977 599999999322 122 2 12222 11 1 156788899
Q ss_pred CCEEEEecCCchhhHhhccHHHHhccCCCcEEEEc
Q psy6348 153 ADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNV 187 (333)
Q Consensus 153 aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~ 187 (333)
+|+|++++|.. ..+.++ ++....+++++++++.
T Consensus 83 aD~Vilav~~~-~~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 83 ADVVILTVPAF-AHEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp CSEEEECSCGG-GHHHHH-HHHTTTCCTTCEEEET
T ss_pred CCEEEEeCchH-HHHHHH-HHHHhhCCCCcEEEEc
Confidence 99999999953 344444 4455667889999985
No 178
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.97 E-value=3e-05 Score=71.46 Aligned_cols=71 Identities=23% Similarity=0.159 Sum_probs=52.9
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH--HHHHhcC----ccccChhhhc-cCCCEEEEecCCch
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV--EDAAKLN----IASLGLEDIW-PLADYITVHTPLIP 164 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~g----v~~~~l~ell-~~aDvV~l~~P~t~ 164 (333)
.++.||++.|+|.|.+|+.++..|...|.+|+++++.... +.+++.+ +...+++++. .++|+|+.++|...
T Consensus 115 ~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~ 192 (271)
T 1nyt_A 115 FIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGI 192 (271)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGG
T ss_pred cCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCC
Confidence 4678999999999999999999999999999999986532 2223322 2223444444 58999999998643
No 179
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.89 E-value=3.2e-05 Score=72.50 Aligned_cols=65 Identities=20% Similarity=0.215 Sum_probs=48.0
Q ss_pred CEEEEEecChHHHHHHHHHhhCC--CEEEEEcCCCCH-H-HHHhcC---------ccc--cChhhhccCCCEEEEecCCc
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFG--MKVIGFDPMVSV-E-DAAKLN---------IAS--LGLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G--~~V~~~d~~~~~-~-~a~~~g---------v~~--~~l~ell~~aDvV~l~~P~t 163 (333)
++|+|||.|.||..+|..|...| .+|..||+.... + .+.+.+ +.. .++ +.+++||+|++++|..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 58999999999999999998878 699999996522 1 111111 222 255 6789999999999953
Q ss_pred h
Q psy6348 164 P 164 (333)
Q Consensus 164 ~ 164 (333)
.
T Consensus 81 ~ 81 (309)
T 1hyh_A 81 K 81 (309)
T ss_dssp G
T ss_pred c
Confidence 3
No 180
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.88 E-value=9.4e-05 Score=61.91 Aligned_cols=100 Identities=14% Similarity=0.067 Sum_probs=73.2
Q ss_pred CCEEEEEec----ChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhccH
Q psy6348 98 GKTLAVLGL----GRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLINA 172 (333)
Q Consensus 98 gktvGIIGl----G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~ 172 (333)
-++|+|||. |++|..+++.|+..|++|+..+|... .-.|+... +++|+....|++++++|. +....++.
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~----~i~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv~- 95 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYE----EVLGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYVE- 95 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS----EETTEECBSSGGGCSSCCSEEEECSCH-HHHHHHHH-
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCC----eECCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHHH-
Confidence 579999999 79999999999999999888877531 12466654 799999899999999995 55566653
Q ss_pred HHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 173 EVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 173 ~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
+..+ ...+.+++.. |. .++++.++.++..+.
T Consensus 96 ~~~~-~gi~~i~~~~--g~--~~~~l~~~a~~~Gi~ 126 (144)
T 2d59_A 96 QAIK-KGAKVVWFQY--NT--YNREASKKADEAGLI 126 (144)
T ss_dssp HHHH-HTCSEEEECT--TC--CCHHHHHHHHHTTCE
T ss_pred HHHH-cCCCEEEECC--Cc--hHHHHHHHHHHcCCE
Confidence 3333 3334565543 32 377888888877665
No 181
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.85 E-value=4.7e-05 Score=63.57 Aligned_cols=103 Identities=22% Similarity=0.261 Sum_probs=73.8
Q ss_pred CCCEEEEEec----ChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhcc
Q psy6348 97 YGKTLAVLGL----GRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 97 ~gktvGIIGl----G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~ 171 (333)
.-++++|||. |++|..+++.++..|++|+..+|....+ +-.|+... +++|+-...|++++++|. +....++.
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~--~i~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~~ 88 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGE--ELFGEEAVASLLDLKEPVDILDVFRPP-SALMDHLP 88 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTS--EETTEECBSSGGGCCSCCSEEEECSCH-HHHTTTHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccC--cCCCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHHH
Confidence 3579999999 8999999999999999988887752111 11466654 799998899999999995 56666663
Q ss_pred HHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 172 AEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 172 ~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
+..+ ...+.++++.+.. ++++.+..++..++
T Consensus 89 -~~~~-~gi~~i~~~~g~~----~~~~~~~a~~~Gir 119 (140)
T 1iuk_A 89 -EVLA-LRPGLVWLQSGIR----HPEFEKALKEAGIP 119 (140)
T ss_dssp -HHHH-HCCSCEEECTTCC----CHHHHHHHHHTTCC
T ss_pred -HHHH-cCCCEEEEcCCcC----HHHHHHHHHHcCCE
Confidence 3333 3334566654332 57788888876665
No 182
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.85 E-value=4.8e-05 Score=71.55 Aligned_cols=67 Identities=19% Similarity=0.234 Sum_probs=53.0
Q ss_pred CEEEEEecChHHHHHHHHHhhC-CCEEE-EEcCCCCH--HHHHhcCccccChhhhcc--CCCEEEEecCCchh
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF-GMKVI-GFDPMVSV--EDAAKLNIASLGLEDIWP--LADYITVHTPLIPQ 165 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~gv~~~~l~ell~--~aDvV~l~~P~t~~ 165 (333)
.++||||+|.||+.+++.+... +++++ ++|+.... +.+++.|+.+.+++++++ +.|+|++++|....
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~h 76 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCEVRTIDAIEAAADIDAVVICTPTDTH 76 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCEECCHHHHHHCTTCCEEEECSCGGGH
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCCcCCHHHHhcCCCCCEEEEeCCchhH
Confidence 4899999999999999999875 78877 58886532 334556777558999998 89999999995443
No 183
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.85 E-value=3.2e-05 Score=73.29 Aligned_cols=87 Identities=14% Similarity=0.143 Sum_probs=63.1
Q ss_pred CCCEEEEEecChHHHHHHHHHhh-C-CCEEEEEcCCCCH--HHHHhc-----CccccChhhhccCCCEEEEecCCchhhH
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQA-F-GMKVIGFDPMVSV--EDAAKL-----NIASLGLEDIWPLADYITVHTPLIPQTK 167 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~-~-G~~V~~~d~~~~~--~~a~~~-----gv~~~~l~ell~~aDvV~l~~P~t~~t~ 167 (333)
..++++|||.|.+|+.+++.+.. . .-+|.+||++... +.++++ .+...++++++ ++|+|++++|.. .
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~~~~~~e~v-~aDvVi~aTp~~---~ 199 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEAS-RCDVLVTTTPSR---K 199 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHT-SSSEEEECCCCS---S
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEEECCHHHHh-CCCEEEEeeCCC---C
Confidence 46799999999999999998876 3 3589999997632 122222 23334788999 999999999953 2
Q ss_pred hhccHHHHhccCCCcEEEEccCC
Q psy6348 168 NLINAEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 168 ~li~~~~~~~mk~gailIN~aRg 190 (333)
.++.. +.+++|..+++++..
T Consensus 200 pv~~~---~~l~~G~~V~~ig~~ 219 (322)
T 1omo_A 200 PVVKA---EWVEEGTHINAIGAD 219 (322)
T ss_dssp CCBCG---GGCCTTCEEEECSCC
T ss_pred ceecH---HHcCCCeEEEECCCC
Confidence 44432 457899999988544
No 184
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.84 E-value=4.6e-05 Score=63.59 Aligned_cols=88 Identities=14% Similarity=0.053 Sum_probs=58.8
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH--HHHH---hcCcccc--------Chhhh-ccCCCEEEEecCCc
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV--EDAA---KLNIASL--------GLEDI-WPLADYITVHTPLI 163 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~---~~gv~~~--------~l~el-l~~aDvV~l~~P~t 163 (333)
.+++.|+|+|.+|+.+++.|...|++|++.|+.... +... ..|+... .++++ +.++|+|+++++..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 568999999999999999999999999999986421 1111 2244322 24444 78999999999854
Q ss_pred hhhHhhccHHHHhccCCCcEEEEc
Q psy6348 164 PQTKNLINAEVLKKCKKGVRVVNV 187 (333)
Q Consensus 164 ~~t~~li~~~~~~~mk~gailIN~ 187 (333)
+ .++.-......+.+...+|..
T Consensus 83 ~--~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 83 A--DNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp H--HHHHHHHHHHHHTSSSCEEEE
T ss_pred H--HHHHHHHHHHHHCCCCEEEEE
Confidence 3 333334445555444445543
No 185
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=97.82 E-value=0.00011 Score=77.16 Aligned_cols=132 Identities=18% Similarity=0.221 Sum_probs=93.4
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHh-----------c----C-------ccccChhhhccCCCE
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAK-----------L----N-------IASLGLEDIWPLADY 155 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-----------~----g-------v~~~~l~ell~~aDv 155 (333)
++|||||.|.||+.+|..+...|++|+.+|+.... +.+.+ . . +...+-.+.+++||+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aDl 396 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELSTVDL 396 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGGGSCSE
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHHhhCCE
Confidence 69999999999999999999999999999986521 11110 0 0 011222345789999
Q ss_pred EEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcEE
Q psy6348 156 ITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKVI 235 (333)
Q Consensus 156 V~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnvi 235 (333)
|+=++|.+.+.+.-+-++.-+.++++++|-..+.+ +....|.++++ ..=+-.++..|.+-|. -||.+ ||
T Consensus 397 VIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs--l~i~~ia~~~~-~p~r~ig~HFfnP~~~-----m~LVE---vi 465 (742)
T 3zwc_A 397 VVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTD-RPQLVIGTHFFSPAHV-----MRLLE---VI 465 (742)
T ss_dssp EEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSS-CGGGEEEEECCSSTTT-----CCEEE---EE
T ss_pred EEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc--CChHHHHhhcC-CccccccccccCCCCC-----CceEE---Ee
Confidence 99999999888887777777889999998876555 45566777764 3344578887764331 24554 67
Q ss_pred EccCCC
Q psy6348 236 VTPHLG 241 (333)
Q Consensus 236 ~TPHi~ 241 (333)
-+|+.+
T Consensus 466 ~g~~Ts 471 (742)
T 3zwc_A 466 PSRYSS 471 (742)
T ss_dssp ECSSCC
T ss_pred cCCCCC
Confidence 666643
No 186
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.82 E-value=4e-05 Score=71.37 Aligned_cols=105 Identities=14% Similarity=0.181 Sum_probs=69.7
Q ss_pred CCEEEEEecChHHHH-HHHHHhh-CCCEEE-EEcCCCCH--HHHHhcCccc-cChhhhccCCCEEEEecCCchhhHhhcc
Q psy6348 98 GKTLAVLGLGRIGRE-VALRMQA-FGMKVI-GFDPMVSV--EDAAKLNIAS-LGLEDIWPLADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 98 gktvGIIGlG~IG~~-vA~~l~~-~G~~V~-~~d~~~~~--~~a~~~gv~~-~~l~ell~~aDvV~l~~P~t~~t~~li~ 171 (333)
-.++||||+|.||+. +++.++. -+.++. ++|+.... +.+++.|+.. .++++++.+.|+|++++|........
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~~-- 83 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHYEII-- 83 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHHHHH--
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHHHHH--
Confidence 368999999999997 8888876 478887 68886532 2344567653 48999999999999999954332222
Q ss_pred HHHHhccCCCc-EEEE-ccCCcccchHhHHhhhhcCCc
Q psy6348 172 AEVLKKCKKGV-RVVN-VARGGIVDENALLDSLKCGHC 207 (333)
Q Consensus 172 ~~~~~~mk~ga-ilIN-~aRg~~vd~~aL~~aL~~g~i 207 (333)
. ..++.|. +++. -..-.+-+.++|.++.++..+
T Consensus 84 ~---~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~ 118 (308)
T 3uuw_A 84 K---ILLNLGVHVYVDKPLASTVSQGEELIELSTKKNL 118 (308)
T ss_dssp H---HHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTC
T ss_pred H---HHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCC
Confidence 2 2344454 3433 233445556667777766544
No 187
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.79 E-value=7.1e-05 Score=70.22 Aligned_cols=105 Identities=14% Similarity=0.178 Sum_probs=67.4
Q ss_pred CEEEEEecChHHHH-HHHHHhhC-CCEEEEEcCCCCH--HHHHhcCcc--ccChhhhc-cCCCEEEEecCCchhhHhhcc
Q psy6348 99 KTLAVLGLGRIGRE-VALRMQAF-GMKVIGFDPMVSV--EDAAKLNIA--SLGLEDIW-PLADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 99 ktvGIIGlG~IG~~-vA~~l~~~-G~~V~~~d~~~~~--~~a~~~gv~--~~~l~ell-~~aDvV~l~~P~t~~t~~li~ 171 (333)
.++||||+|.||+. +++.++.. +.+++++|+.... +.+++.|+. +.+..+++ .++|+|++++|...... +
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~-~-- 79 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHST-L-- 79 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHHH-H--
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhHHH-H--
Confidence 37999999999994 88888765 7788899986532 234556765 34555666 78999999999433221 1
Q ss_pred HHHHhccCCCc-EEEEc-cCCcccchHhHHhhhhcCCce
Q psy6348 172 AEVLKKCKKGV-RVVNV-ARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 172 ~~~~~~mk~ga-ilIN~-aRg~~vd~~aL~~aL~~g~i~ 208 (333)
..+.++.|. +++.- .--.+-+.++|.++.++..+.
T Consensus 80 --~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (323)
T 1xea_A 80 --AAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP 116 (323)
T ss_dssp --HHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred --HHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCe
Confidence 122344554 55542 223344556677777766554
No 188
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=97.78 E-value=5.8e-06 Score=76.93 Aligned_cols=91 Identities=12% Similarity=0.065 Sum_probs=63.9
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhcCcc---c-cChhhhc-cCCCEEEEecCCchhhHhhccH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKLNIA---S-LGLEDIW-PLADYITVHTPLIPQTKNLINA 172 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~gv~---~-~~l~ell-~~aDvV~l~~P~t~~t~~li~~ 172 (333)
++|+|||.|.||..+|..|...|.+|.+|++.... +.....|.. . .+..+.+ ..+|+|++++|.. .+..++ +
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~-~~~~~l-~ 80 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTH-QLDAVI-P 80 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGG-GHHHHG-G
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCcc-CHHHHH-H
Confidence 58999999999999999999889999999987421 111122321 1 1334444 8899999999943 455554 3
Q ss_pred HHHhccCCCcEEEEccCCc
Q psy6348 173 EVLKKCKKGVRVVNVARGG 191 (333)
Q Consensus 173 ~~~~~mk~gailIN~aRg~ 191 (333)
+....+++++++|.+.-|=
T Consensus 81 ~l~~~l~~~~~iv~~~nGi 99 (294)
T 3g17_A 81 HLTYLAHEDTLIILAQNGY 99 (294)
T ss_dssp GHHHHEEEEEEEEECCSSC
T ss_pred HHHHhhCCCCEEEEeccCc
Confidence 3445577888999987774
No 189
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.76 E-value=6.4e-05 Score=71.11 Aligned_cols=67 Identities=21% Similarity=0.321 Sum_probs=52.0
Q ss_pred CEEEEEecChHHHHHHHHHhhC-CCEEE-EEcCCCCH--HHHHhcCccc-cChhhhcc--CCCEEEEecCCchh
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF-GMKVI-GFDPMVSV--EDAAKLNIAS-LGLEDIWP--LADYITVHTPLIPQ 165 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~gv~~-~~l~ell~--~aDvV~l~~P~t~~ 165 (333)
.++||||+|.||+.+++.++.. +++++ ++|+.... +.+++.|+.. .++++++. +.|+|++++|....
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h 78 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTH 78 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGH
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhh
Confidence 4899999999999999998876 77877 58886532 2344557654 48999998 89999999995443
No 190
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.75 E-value=8.9e-05 Score=69.38 Aligned_cols=105 Identities=17% Similarity=0.178 Sum_probs=69.8
Q ss_pred CEEEEEecChHHHH-HHHHHhh-CCCEEE-EEcCCCCH--HHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhccH
Q psy6348 99 KTLAVLGLGRIGRE-VALRMQA-FGMKVI-GFDPMVSV--EDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLINA 172 (333)
Q Consensus 99 ktvGIIGlG~IG~~-vA~~l~~-~G~~V~-~~d~~~~~--~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~ 172 (333)
.++||||+|.||+. +++.+.. -++++. ++|+.... +.+++.|+... +++++..++|+|++++|.......
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~~~---- 81 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHFDV---- 81 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHHHH----
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHHHH----
Confidence 48999999999997 8888765 477876 78987643 23455576543 677776789999999995433222
Q ss_pred HHHhccCCCc-EEEEc-cCCcccchHhHHhhhhcCCce
Q psy6348 173 EVLKKCKKGV-RVVNV-ARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 173 ~~~~~mk~ga-ilIN~-aRg~~vd~~aL~~aL~~g~i~ 208 (333)
....++.|. +++.- .-..+-+.++|.++.++..+.
T Consensus 82 -~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 118 (319)
T 1tlt_A 82 -VSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLT 118 (319)
T ss_dssp -HHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 223355665 55542 233455666788887766554
No 191
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.75 E-value=9.9e-05 Score=69.65 Aligned_cols=110 Identities=20% Similarity=0.207 Sum_probs=66.9
Q ss_pred CEEEEEecChHHHHHHHHHhhCCC--EEEEEcCCCCH-HH-HHhc--------C--ccccChhhhccCCCEEEEecCCch
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGM--KVIGFDPMVSV-ED-AAKL--------N--IASLGLEDIWPLADYITVHTPLIP 164 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~-~~-a~~~--------g--v~~~~l~ell~~aDvV~l~~P~t~ 164 (333)
++|+|||.|.||..+|..|...|+ +|..||+.... +. .... . +...+ .+.+++||+|++++|...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 489999999999999999988888 99999986421 11 1111 1 11123 356789999999999533
Q ss_pred h---hH--------hhccHHH---HhccCCCcEEEEccCCcccchHhHHhhh--hcCCceEE
Q psy6348 165 Q---TK--------NLINAEV---LKKCKKGVRVVNVARGGIVDENALLDSL--KCGHCGGA 210 (333)
Q Consensus 165 ~---t~--------~li~~~~---~~~mk~gailIN~aRg~~vd~~aL~~aL--~~g~i~ga 210 (333)
. ++ .++ ++. +....+++++|+++-+.-+....+.+.. ...++.|.
T Consensus 80 ~~g~~r~dl~~~n~~i~-~~i~~~i~~~~~~~~ii~~tNp~~~~~~~~~~~~~~~~~rviG~ 140 (319)
T 1a5z_A 80 KPGETRLQLLGRNARVM-KEIARNVSKYAPDSIVIVVTNPVDVLTYFFLKESGMDPRKVFGS 140 (319)
T ss_dssp CSSCCHHHHHHHHHHHH-HHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred CCCCCHHHHHHHHHHHH-HHHHHHHHhhCCCeEEEEeCCcHHHHHHHHHHHhCCChhhEEee
Confidence 1 01 111 222 2222578899888654433333333322 34466554
No 192
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.73 E-value=0.00014 Score=68.38 Aligned_cols=110 Identities=17% Similarity=0.248 Sum_probs=67.5
Q ss_pred CEEEEEecChHHHHHHHHHhh--CCCEEEEEcCCCCHHHHHh----cC---------ccc-cChhhhccCCCEEEEecCC
Q psy6348 99 KTLAVLGLGRIGREVALRMQA--FGMKVIGFDPMVSVEDAAK----LN---------IAS-LGLEDIWPLADYITVHTPL 162 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~--~G~~V~~~d~~~~~~~a~~----~g---------v~~-~~l~ell~~aDvV~l~~P~ 162 (333)
++|+|||.|.||..+|..|.. +|.+|..||+......... .. +.. .++++ +++||+|++++|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 479999999999999999876 5899999999764322211 11 122 25666 8999999999974
Q ss_pred chhhHhh-----c--c----HH---HHhccCCCcEEEEccCCcccch--HhHHhh--hhcCCceEEEe
Q psy6348 163 IPQTKNL-----I--N----AE---VLKKCKKGVRVVNVARGGIVDE--NALLDS--LKCGHCGGAAL 212 (333)
Q Consensus 163 t~~t~~l-----i--~----~~---~~~~mk~gailIN~aRg~~vd~--~aL~~a--L~~g~i~gaal 212 (333)
. ...+. + + ++ .+....+++.+|+++- .++. ..+.+. +...++.|.+.
T Consensus 80 p-~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tN--P~~~~~~~~~~~~~~~~~rviG~gt 144 (310)
T 1guz_A 80 P-RKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSN--PLDIMTHVAWVRSGLPKERVIGMAG 144 (310)
T ss_dssp C-CCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCS--SHHHHHHHHHHHHCSCGGGEEEECH
T ss_pred C-CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcC--chHHHHHHHHHhcCCChHHEEECCC
Confidence 2 11111 0 0 11 2222357888888844 3333 223222 44556766643
No 193
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.73 E-value=6.2e-05 Score=69.85 Aligned_cols=93 Identities=19% Similarity=0.186 Sum_probs=61.5
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH--HHHHhcC----------ccccChhhhccCCCEEEEecC
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV--EDAAKLN----------IASLGLEDIWPLADYITVHTP 161 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~a~~~g----------v~~~~l~ell~~aDvV~l~~P 161 (333)
.++.||++.|+|.|.||+++|..|...| +|+++++.... +.+++.+ +...++.+.+.++|+|+.++|
T Consensus 124 ~~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag 202 (287)
T 1nvt_A 124 GRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATP 202 (287)
T ss_dssp CCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSC
T ss_pred CCcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCC
Confidence 4578999999999999999999999999 99999986422 1112211 111234667788999999998
Q ss_pred CchhhH--h-hccHHHHhccCCCcEEEEccC
Q psy6348 162 LIPQTK--N-LINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 162 ~t~~t~--~-li~~~~~~~mk~gailIN~aR 189 (333)
...... . .+. ..+.++++.+++|+.-
T Consensus 203 ~~~~~~~~~~~~~--~~~~l~~~~~v~Dv~y 231 (287)
T 1nvt_A 203 IGMYPNIDVEPIV--KAEKLREDMVVMDLIY 231 (287)
T ss_dssp TTCTTCCSSCCSS--CSTTCCSSSEEEECCC
T ss_pred CCCCCCCCCCCCC--CHHHcCCCCEEEEeee
Confidence 543210 0 010 1234566667777654
No 194
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=97.72 E-value=7.5e-05 Score=72.72 Aligned_cols=90 Identities=18% Similarity=0.122 Sum_probs=64.8
Q ss_pred EEEEEecChHHHHHHHHHhhCC--------CEEEEEcCCCC---H---HHHHhc--------Ccc------c-cChhhhc
Q psy6348 100 TLAVLGLGRIGREVALRMQAFG--------MKVIGFDPMVS---V---EDAAKL--------NIA------S-LGLEDIW 150 (333)
Q Consensus 100 tvGIIGlG~IG~~vA~~l~~~G--------~~V~~~d~~~~---~---~~a~~~--------gv~------~-~~l~ell 150 (333)
||+|||.|.+|.++|..|...| .+|..|.+... . +..... |+. . .++++.+
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al 115 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSV 115 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHH
Confidence 8999999999999999987654 35888876532 1 111111 221 1 2688999
Q ss_pred cCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCc
Q psy6348 151 PLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGG 191 (333)
Q Consensus 151 ~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~ 191 (333)
++||+|++++| +...+.++ ++....++++..+|+++.|=
T Consensus 116 ~~ad~ii~avP-s~~~r~~l-~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 116 KDVDIIVFNIP-HQFLPRIC-SQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp TTCSEEEECSC-GGGHHHHH-HHHTTTSCTTCEEEECCCSC
T ss_pred hcCCEEEEECC-hhhhHHHH-HHhccccCCCceeEEecccc
Confidence 99999999999 45555554 44556788999999999884
No 195
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.72 E-value=6.8e-05 Score=70.36 Aligned_cols=112 Identities=10% Similarity=0.079 Sum_probs=69.9
Q ss_pred CEEEEEecChHHHHHHHHHhhCCC--EEEEEcCCCCHHH--HHhc--C------cccc-ChhhhccCCCEEEEecCCchh
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGM--KVIGFDPMVSVED--AAKL--N------IASL-GLEDIWPLADYITVHTPLIPQ 165 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a~~~--g------v~~~-~l~ell~~aDvV~l~~P~t~~ 165 (333)
++|+|||.|.||..+|..+...|+ +|..||....... +.++ . .... +-.+.+++||+|+++++....
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi~~~~~~~ 80 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVILTAGANQK 80 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEECC-----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEEcCCCCCC
Confidence 489999999999999999999898 9999998642111 1211 1 1111 224678999999999953221
Q ss_pred -----------hHhhcc--HHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEE
Q psy6348 166 -----------TKNLIN--AEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGA 210 (333)
Q Consensus 166 -----------t~~li~--~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ga 210 (333)
+..++. .+.+....+++++|+++-+.-+....+.+.....++.|.
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 81 PGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred CCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHHHHhCChhcEEeC
Confidence 111111 122233368999999866554555556666566677665
No 196
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.71 E-value=7.4e-05 Score=70.07 Aligned_cols=103 Identities=16% Similarity=0.137 Sum_probs=64.4
Q ss_pred EEEEEecChHHHHH-HHHHhhCCCEEE-EEcCCCCH--HHHHhcCcc--ccChhhhcc--CCCEEEEecCCchhhHhhcc
Q psy6348 100 TLAVLGLGRIGREV-ALRMQAFGMKVI-GFDPMVSV--EDAAKLNIA--SLGLEDIWP--LADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 100 tvGIIGlG~IG~~v-A~~l~~~G~~V~-~~d~~~~~--~~a~~~gv~--~~~l~ell~--~aDvV~l~~P~t~~t~~li~ 171 (333)
++||||+|.||+.+ ++.+...|++++ ++|+.... +.+++.|+. +.+++++++ ++|+|++++|.......
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~--- 78 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHREQ--- 78 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHHH---
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHHH---
Confidence 79999999999998 777766788876 67886522 234456764 347899987 59999999994332221
Q ss_pred HHHHhccCCCc-EEEEc-cCCcccchHhHHhhhhcCCc
Q psy6348 172 AEVLKKCKKGV-RVVNV-ARGGIVDENALLDSLKCGHC 207 (333)
Q Consensus 172 ~~~~~~mk~ga-ilIN~-aRg~~vd~~aL~~aL~~g~i 207 (333)
..+.++.|. +++.- .....-+.++|.++.++..+
T Consensus 79 --~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~ 114 (332)
T 2glx_A 79 --TLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGV 114 (332)
T ss_dssp --HHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTC
T ss_pred --HHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCC
Confidence 223345565 44432 12233444556665554433
No 197
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.70 E-value=8.3e-05 Score=69.76 Aligned_cols=64 Identities=16% Similarity=0.196 Sum_probs=48.3
Q ss_pred EEEEEecChHHHHHHHHHhhC-CCEEE-EEcCCCCH--HHHHhcCc-c-ccChhhhc-cCCCEEEEecCCc
Q psy6348 100 TLAVLGLGRIGREVALRMQAF-GMKVI-GFDPMVSV--EDAAKLNI-A-SLGLEDIW-PLADYITVHTPLI 163 (333)
Q Consensus 100 tvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~gv-~-~~~l~ell-~~aDvV~l~~P~t 163 (333)
++||||+|.||+.+++.+... +.++. ++|+.... +.+++.|. . +.++++++ .++|+|++++|..
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~ 73 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNS 73 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGG
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChH
Confidence 799999999999999998876 57765 67886522 22334454 3 34789999 7899999999943
No 198
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.69 E-value=5.8e-05 Score=70.40 Aligned_cols=66 Identities=20% Similarity=0.208 Sum_probs=50.4
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCCHHHHHhc--Ccccc---ChhhhccCCCEEEEecCC
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVSVEDAAKL--NIASL---GLEDIWPLADYITVHTPL 162 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a~~~--gv~~~---~l~ell~~aDvV~l~~P~ 162 (333)
+.++.|+++.|+|.|.+|+.++..|...|. +|.+++|+. +.++++ .+... ++++ + ++|+|+.++|.
T Consensus 117 ~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~--~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~ 188 (282)
T 3fbt_A 117 RVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP--EKTSEIYGEFKVISYDELSN-L-KGDVIINCTPK 188 (282)
T ss_dssp TCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH--HHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSST
T ss_pred CCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH--HHHHHHHHhcCcccHHHHHh-c-cCCEEEECCcc
Confidence 456789999999999999999999999999 999999865 333332 22222 3444 4 89999999985
No 199
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.67 E-value=5.2e-05 Score=72.07 Aligned_cols=66 Identities=20% Similarity=0.202 Sum_probs=51.9
Q ss_pred CEEEEEecChHHHHHHHHHhhC--CCEEE-EEcCCCCH--HHHHhcCcccc-Chhhhcc--CCCEEEEecCCch
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF--GMKVI-GFDPMVSV--EDAAKLNIASL-GLEDIWP--LADYITVHTPLIP 164 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~--G~~V~-~~d~~~~~--~~a~~~gv~~~-~l~ell~--~aDvV~l~~P~t~ 164 (333)
.++||||+|.||+..++.++.. +++++ ++|+.... +.+++.|+... +++++++ +.|+|++++|...
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 87 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGL 87 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGGG
T ss_pred ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcHH
Confidence 5899999999999999999876 78866 67886532 23455677543 8999987 8999999999543
No 200
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.65 E-value=0.00023 Score=67.57 Aligned_cols=111 Identities=17% Similarity=0.261 Sum_probs=67.7
Q ss_pred CEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCCHHHH-----Hh----c----Cccc-cChhhhccCCCEEEEec--C
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVSVEDA-----AK----L----NIAS-LGLEDIWPLADYITVHT--P 161 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a-----~~----~----gv~~-~~l~ell~~aDvV~l~~--P 161 (333)
++|+|||.|.||..+|..+...|+ +|..||........ .+ . .+.. .++ +.+++||+|++++ |
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg~p 93 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAGVP 93 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 699999999999999999998898 99999987633211 01 0 1222 256 7789999999998 4
Q ss_pred Cchh---------hHhhc---cHHHHhccCCCcEEEEccCCcccchHhHHhhh--hcCCceEEE
Q psy6348 162 LIPQ---------TKNLI---NAEVLKKCKKGVRVVNVARGGIVDENALLDSL--KCGHCGGAA 211 (333)
Q Consensus 162 ~t~~---------t~~li---~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL--~~g~i~gaa 211 (333)
..+. +..++ .++. ....|++++|+++-..-+....+.+.- ...++.|.+
T Consensus 94 ~k~g~tr~dl~~~n~~i~~~i~~~i-~~~~p~a~viv~tNP~~~~t~~~~~~~~~~~~rviG~~ 156 (328)
T 2hjr_A 94 RKPNMTRSDLLTVNAKIVGSVAENV-GKYCPNAFVICITNPLDAMVYYFKEKSGIPANKVCGMS 156 (328)
T ss_dssp CCTTCCSGGGHHHHHHHHHHHHHHH-HHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEESC
T ss_pred CCCCCchhhHHhhhHHHHHHHHHHH-HHHCCCeEEEEecCchHHHHHHHHHhcCCChhhEEEeC
Confidence 3221 11111 1222 223488999887553222222222221 355666663
No 201
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.65 E-value=0.00033 Score=67.96 Aligned_cols=123 Identities=18% Similarity=0.166 Sum_probs=90.2
Q ss_pred CCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCC-
Q psy6348 44 KGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGM- 122 (333)
Q Consensus 44 ~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~- 122 (333)
..|+|+|+. -..+|=.+++-+++..| ..|..+...++.|+|.|.+|..+|+.+.+.|.
T Consensus 159 ~~Ipvf~DD---iqGTasV~lAal~~A~~------------------i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~ 217 (388)
T 1vl6_A 159 MNIPVFHDD---QQGTAVVVSAAFLNALK------------------LTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVK 217 (388)
T ss_dssp CSSCEEEHH---HHHHHHHHHHHHHHHHH------------------HHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCC
T ss_pred cCcceeccc---cccHHHHHHHHHHHHHH------------------HhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCC
Confidence 468999952 22334445555554444 13457889999999999999999999999999
Q ss_pred EEEEEcCC----CCH----------HHHHhcCc--cccChhhhccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEE
Q psy6348 123 KVIGFDPM----VSV----------EDAAKLNI--ASLGLEDIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVN 186 (333)
Q Consensus 123 ~V~~~d~~----~~~----------~~a~~~gv--~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN 186 (333)
+|+.+|+. ... ..+.+... ...+|.|.++++|+++-+.- -+++.++.++.|+++++++.
T Consensus 218 ~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADVlIG~Sa-----p~l~t~emVk~Ma~~pIIfa 292 (388)
T 1vl6_A 218 NVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADFFIGVSR-----GNILKPEWIKKMSRKPVIFA 292 (388)
T ss_dssp EEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSEEEECSC-----SSCSCHHHHTTSCSSCEEEE
T ss_pred eEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCEEEEeCC-----CCccCHHHHHhcCCCCEEEE
Confidence 89999987 311 12222221 12379999999999887731 38999999999999999999
Q ss_pred ccCCcc
Q psy6348 187 VARGGI 192 (333)
Q Consensus 187 ~aRg~~ 192 (333)
+|+...
T Consensus 293 lSNPt~ 298 (388)
T 1vl6_A 293 LANPVP 298 (388)
T ss_dssp CCSSSC
T ss_pred cCCCCC
Confidence 998653
No 202
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.65 E-value=6.5e-05 Score=71.41 Aligned_cols=67 Identities=16% Similarity=0.209 Sum_probs=52.4
Q ss_pred CEEEEEecChHHHHHHHHHhhC-CCEEE-EEcCCCCH--HHHHhcCccc-cChhhhc--cCCCEEEEecCCchh
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF-GMKVI-GFDPMVSV--EDAAKLNIAS-LGLEDIW--PLADYITVHTPLIPQ 165 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~gv~~-~~l~ell--~~aDvV~l~~P~t~~ 165 (333)
.++||||+|.||+.+++.++.. +++++ ++|+.... +.+++.|+.. .++++++ .+.|+|++++|....
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h 79 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKH 79 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSH
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHH
Confidence 4899999999999999999887 88866 67886532 2334567754 4899999 679999999996544
No 203
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.64 E-value=0.00011 Score=70.10 Aligned_cols=68 Identities=13% Similarity=0.059 Sum_probs=51.7
Q ss_pred CCCEEEEEecChHHH-HHHHHHhhC-CCEEE-EEcCCCCH--HHHHhcCcccc-Chhhhcc--CCCEEEEecCCch
Q psy6348 97 YGKTLAVLGLGRIGR-EVALRMQAF-GMKVI-GFDPMVSV--EDAAKLNIASL-GLEDIWP--LADYITVHTPLIP 164 (333)
Q Consensus 97 ~gktvGIIGlG~IG~-~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~gv~~~-~l~ell~--~aDvV~l~~P~t~ 164 (333)
.-.++||||+|.||+ .++..++.. +++|. ++|+.... +.+++.|+... +++++++ +.|+|++++|...
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~ 101 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVL 101 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGG
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHH
Confidence 346899999999999 788888876 78876 57886522 23455677554 8999986 5899999999544
No 204
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.64 E-value=0.0001 Score=69.08 Aligned_cols=101 Identities=16% Similarity=0.102 Sum_probs=62.7
Q ss_pred CEEEEEecChHHHHHHHHHhh-CCCEEE-EEcCCCCHHHHHhcCcccc---ChhhhccCCCEEEEecCCchhhHhhccHH
Q psy6348 99 KTLAVLGLGRIGREVALRMQA-FGMKVI-GFDPMVSVEDAAKLNIASL---GLEDIWPLADYITVHTPLIPQTKNLINAE 173 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~-~G~~V~-~~d~~~~~~~a~~~gv~~~---~l~ell~~aDvV~l~~P~t~~t~~li~~~ 173 (333)
.++||||+|+||+.+++.++. -++++. ++|+.... ++..|+.+. ++.+. .++|+|++|+|..... +.
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~--~~~~g~~~~~~~~l~~~-~~~DvViiatp~~~h~-----~~ 81 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAE--VPFELQPFRVVSDIEQL-ESVDVALVCSPSREVE-----RT 81 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC---------CCTTSCEESSGGGS-SSCCEEEECSCHHHHH-----HH
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHH--HHHcCCCcCCHHHHHhC-CCCCEEEECCCchhhH-----HH
Confidence 489999999999999999886 478887 58886532 233665432 44444 6899999999843222 22
Q ss_pred HHhccCCCcEEEEccC--C-cccchHhHHhhhhcCCc
Q psy6348 174 VLKKCKKGVRVVNVAR--G-GIVDENALLDSLKCGHC 207 (333)
Q Consensus 174 ~~~~mk~gailIN~aR--g-~~vd~~aL~~aL~~g~i 207 (333)
..+.++.|.-++...- + ...+.+.|.++.++..+
T Consensus 82 ~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~ 118 (304)
T 3bio_A 82 ALEILKKGICTADSFDIHDGILALRRSLGDAAGKSGA 118 (304)
T ss_dssp HHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCC
Confidence 3344667777776432 1 23334566776666443
No 205
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.62 E-value=8.3e-05 Score=70.17 Aligned_cols=92 Identities=14% Similarity=0.156 Sum_probs=58.3
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCC--EEEEEcCCCCHHHHHhcCc----c-------c-cChhhhccCCCEEEEecCCc
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGM--KVIGFDPMVSVEDAAKLNI----A-------S-LGLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~a~~~gv----~-------~-~~l~ell~~aDvV~l~~P~t 163 (333)
.+||+|||.|.||.++|..++..|. +|..||...........++ . . .+..+.+++||+|+++.|..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~ 85 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGAN 85 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCC
Confidence 3699999999999999998877665 8999998642222211111 0 0 13457799999999997743
Q ss_pred hh-----------hHhhcc--HHHHhccCCCcEEEEccC
Q psy6348 164 PQ-----------TKNLIN--AEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 164 ~~-----------t~~li~--~~~~~~mk~gailIN~aR 189 (333)
.. +..++. .+.+....|++++++++-
T Consensus 86 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN 124 (316)
T 1ldn_A 86 QKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN 124 (316)
T ss_dssp CCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred CCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 21 111110 112233358889999854
No 206
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.61 E-value=0.00013 Score=64.55 Aligned_cols=87 Identities=23% Similarity=0.183 Sum_probs=58.0
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HH-HHhcCcccc--------Chhhh-ccCCCEEEEecCCchhhH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-ED-AAKLNIASL--------GLEDI-WPLADYITVHTPLIPQTK 167 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~-a~~~gv~~~--------~l~el-l~~aDvV~l~~P~t~~t~ 167 (333)
+++.|+|+|.+|+.+|+.|...|++|+++|+.... +. ....|+... .++++ +.++|+|++++|....
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~-- 78 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEV-- 78 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHH--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHH--
Confidence 36899999999999999999999999999986532 22 233454321 23443 7899999999986433
Q ss_pred hhccHHHHhccCCCcEEEEc
Q psy6348 168 NLINAEVLKKCKKGVRVVNV 187 (333)
Q Consensus 168 ~li~~~~~~~mk~gailIN~ 187 (333)
+++-......+.+...+|-.
T Consensus 79 n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 79 NLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp HHHHHHHHHHTSCCCEEEEC
T ss_pred HHHHHHHHHHHcCCCeEEEE
Confidence 33323333444444555543
No 207
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.61 E-value=0.00016 Score=68.22 Aligned_cols=105 Identities=16% Similarity=0.189 Sum_probs=66.8
Q ss_pred CEEEEEecChHHHHHHHHHh-h-CCCEEE-EEcCCCCH--HHHHhcCc-c-ccChhhhcc--CCCEEEEecCCchhhHhh
Q psy6348 99 KTLAVLGLGRIGREVALRMQ-A-FGMKVI-GFDPMVSV--EDAAKLNI-A-SLGLEDIWP--LADYITVHTPLIPQTKNL 169 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~-~-~G~~V~-~~d~~~~~--~~a~~~gv-~-~~~l~ell~--~aDvV~l~~P~t~~t~~l 169 (333)
.+|||||+|.||+.+++.++ . -|++++ ++|+.... ..+++.|+ . +.+++++++ ++|+|++++|......
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~-- 86 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHPE-- 86 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHHH--
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHHH--
Confidence 48999999999999999887 5 478854 67886532 22345576 3 347899986 6999999999433222
Q ss_pred ccHHHHhccCCCcEE-EEc-cCCcccchHhHHhhhhcC-Cce
Q psy6348 170 INAEVLKKCKKGVRV-VNV-ARGGIVDENALLDSLKCG-HCG 208 (333)
Q Consensus 170 i~~~~~~~mk~gail-IN~-aRg~~vd~~aL~~aL~~g-~i~ 208 (333)
...+.++.|..+ +.- .....-+.++|.++.++. .+.
T Consensus 87 ---~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~ 125 (346)
T 3cea_A 87 ---MTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQI 125 (346)
T ss_dssp ---HHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSC
T ss_pred ---HHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCe
Confidence 222335566533 321 112333445577777665 543
No 208
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.61 E-value=0.00018 Score=68.43 Aligned_cols=114 Identities=18% Similarity=0.216 Sum_probs=70.0
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCCHHHH--H---h----cC----ccc-cChhhhccCCCEEEEec--
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVSVEDA--A---K----LN----IAS-LGLEDIWPLADYITVHT-- 160 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a--~---~----~g----v~~-~~l~ell~~aDvV~l~~-- 160 (333)
.++|+|||.|.+|..+|..|...|+ +|..||........ . + .+ +.. .++++.+++||+|++++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~ 88 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGL 88 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCC
Confidence 3689999999999999999998888 99999987632111 1 1 11 122 36777899999999998
Q ss_pred CCchhh------Hhh-------ccHH---HHhccCCCcEEEEccCCcccchHhHHhhh--hcCCceEEE
Q psy6348 161 PLIPQT------KNL-------INAE---VLKKCKKGVRVVNVARGGIVDENALLDSL--KCGHCGGAA 211 (333)
Q Consensus 161 P~t~~t------~~l-------i~~~---~~~~mk~gailIN~aRg~~vd~~aL~~aL--~~g~i~gaa 211 (333)
|..+.. +-- +-++ .+....|++++|+.+-..=+....+.+.- ...++.|.+
T Consensus 89 p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~~t~~~~~~~~~~~~rviG~g 157 (331)
T 1pzg_A 89 TKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMVKVMCEASGVPTNMICGMA 157 (331)
T ss_dssp SSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEECC
T ss_pred CCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHHHHHHHHHhcCCChhcEEecc
Confidence 654321 111 0111 22333588999988554333333322221 333565553
No 209
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.61 E-value=8.4e-05 Score=71.02 Aligned_cols=66 Identities=23% Similarity=0.282 Sum_probs=51.7
Q ss_pred CEEEEEecChHHHHHHHHHhhC-CCEEE-EEcCCCCH-HHHHhcCcccc-Chhhhcc--CCCEEEEecCCch
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF-GMKVI-GFDPMVSV-EDAAKLNIASL-GLEDIWP--LADYITVHTPLIP 164 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~-~~a~~~gv~~~-~l~ell~--~aDvV~l~~P~t~ 164 (333)
.++||||+|.||+..++.++.. ++++. ++|+.... +.+++.|+... ++++++. +.|+|++++|...
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~ 77 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDS 77 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGG
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHH
Confidence 4899999999999999998876 78876 46886532 33455677544 8999987 7999999999544
No 210
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.60 E-value=0.00012 Score=68.97 Aligned_cols=67 Identities=13% Similarity=0.039 Sum_probs=52.0
Q ss_pred CEEEEEecChHHHHHHHHHhhC-CCEEE-EEcCCCCH--HHHHhcCcc--ccChhhhcc--CCCEEEEecCCchh
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF-GMKVI-GFDPMVSV--EDAAKLNIA--SLGLEDIWP--LADYITVHTPLIPQ 165 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~gv~--~~~l~ell~--~aDvV~l~~P~t~~ 165 (333)
.++||||+|.||+.+++.++.. +++|+ ++|+.... +.+++.|+. +.++++++. +.|+|++++|....
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 80 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGH 80 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGH
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHH
Confidence 5899999999999999999874 67877 57887632 334556763 348999997 79999999995443
No 211
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=97.60 E-value=6.7e-05 Score=73.05 Aligned_cols=83 Identities=22% Similarity=0.258 Sum_probs=68.3
Q ss_pred CCCEEEEEec-ChHHHHHHHHHhhCCC---EEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhccH
Q psy6348 97 YGKTLAVLGL-GRIGREVALRMQAFGM---KVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINA 172 (333)
Q Consensus 97 ~gktvGIIGl-G~IG~~vA~~l~~~G~---~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~ 172 (333)
...++.|||. |++|+.-++.++++|. .|.++|... ...|-. + +.++++|+|+.++......-.++.+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~-----~~~g~~---~-~~i~~aDivIn~vlig~~aP~Lvt~ 283 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKE-----TSRGGP---F-DEIPQADIFINCIYLSKPIAPFTNM 283 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHH-----HTTCSC---C-THHHHSSEEEECCCCCSSCCCSCCH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccc-----cccCCc---h-hhHhhCCEEEECcCcCCCCCcccCH
Confidence 4568999999 9999999999999998 899999743 111322 2 3456999999999986666678999
Q ss_pred HHHhcc-CCCcEEEEcc
Q psy6348 173 EVLKKC-KKGVRVVNVA 188 (333)
Q Consensus 173 ~~~~~m-k~gailIN~a 188 (333)
+.++.| |+|++|||+|
T Consensus 284 e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 284 EKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp HHHCCTTCCCCEEEETT
T ss_pred HHHhcCcCCCeEEEEEe
Confidence 999999 9999999995
No 212
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.58 E-value=0.0003 Score=66.61 Aligned_cols=61 Identities=21% Similarity=0.286 Sum_probs=46.5
Q ss_pred CEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCCHHHH-----Hh----c--C--ccc-cChhhhccCCCEEEEec
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVSVEDA-----AK----L--N--IAS-LGLEDIWPLADYITVHT 160 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a-----~~----~--g--v~~-~~l~ell~~aDvV~l~~ 160 (333)
++|+|||.|.||..+|..+...|+ +|..||........ .+ . . +.. .++ +.+++||+|++++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence 589999999999999999998888 99999987642111 11 1 1 122 256 7789999999998
No 213
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.58 E-value=0.00013 Score=71.46 Aligned_cols=91 Identities=20% Similarity=0.269 Sum_probs=65.1
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCcccc-----C---hhhh-ccCCCEEEEecCCchhhH
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNIASL-----G---LEDI-WPLADYITVHTPLIPQTK 167 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv~~~-----~---l~el-l~~aDvV~l~~P~t~~t~ 167 (333)
+.+|.|+|+|++|+.+|+.|+..|++|++.|.... .+.+++.|+..+ + |+++ +.+||+|++++|....+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n- 82 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTN- 82 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHH-
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHH-
Confidence 45799999999999999999999999999998763 244556676432 1 3344 68899999999864433
Q ss_pred hhccHHHHhccCCCcEEEEccCC
Q psy6348 168 NLINAEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 168 ~li~~~~~~~mk~gailIN~aRg 190 (333)
+.--.....+.+...+|--++.
T Consensus 83 -~~i~~~ar~~~p~~~Iiara~~ 104 (413)
T 3l9w_A 83 -LQLTEMVKEHFPHLQIIARARD 104 (413)
T ss_dssp -HHHHHHHHHHCTTCEEEEEESS
T ss_pred -HHHHHHHHHhCCCCeEEEEECC
Confidence 3334455667777666655443
No 214
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.58 E-value=0.00012 Score=68.22 Aligned_cols=69 Identities=26% Similarity=0.356 Sum_probs=52.4
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCCHH--HHHhcC-------cccc---ChhhhccCCCEEEEec
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVSVE--DAAKLN-------IASL---GLEDIWPLADYITVHT 160 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~--~a~~~g-------v~~~---~l~ell~~aDvV~l~~ 160 (333)
.++.||++.|+|.|.+|+.++..|...|. +|++++|..... .+++.+ +... ++++.++++|+|+.++
T Consensus 123 ~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaT 202 (283)
T 3jyo_A 123 PNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT 202 (283)
T ss_dssp TTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECS
T ss_pred cCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECC
Confidence 46789999999999999999999999999 799999975321 222221 1111 5667788899999999
Q ss_pred CC
Q psy6348 161 PL 162 (333)
Q Consensus 161 P~ 162 (333)
|.
T Consensus 203 p~ 204 (283)
T 3jyo_A 203 PM 204 (283)
T ss_dssp ST
T ss_pred CC
Confidence 84
No 215
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.54 E-value=0.0001 Score=69.70 Aligned_cols=66 Identities=21% Similarity=0.193 Sum_probs=51.0
Q ss_pred CEEEEEecChHHHHHHHHHhhC-CCEEE-EEcCCCCH--HHHHhcCcc--ccChhhhcc--CCCEEEEecCCch
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF-GMKVI-GFDPMVSV--EDAAKLNIA--SLGLEDIWP--LADYITVHTPLIP 164 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~gv~--~~~l~ell~--~aDvV~l~~P~t~ 164 (333)
.++||||+|.||+.+++.+... +++++ ++|+.... +.++..|+. +.+++++++ ++|+|++++|...
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 76 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNT 76 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcc
Confidence 3899999999999999998775 67876 57886532 234556763 348999998 8999999999543
No 216
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.53 E-value=0.00034 Score=62.99 Aligned_cols=90 Identities=26% Similarity=0.188 Sum_probs=63.6
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHH---HHhcCcccc--C-hhhhccCCCEEEEecCCchhh
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVED---AAKLNIASL--G-LEDIWPLADYITVHTPLIPQT 166 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~---a~~~gv~~~--~-l~ell~~aDvV~l~~P~t~~t 166 (333)
..++.|+++.|||.|.+|..-++.|...|.+|++++|....+. +.+.++++. + .++.+..+|+|+.++.. ++.
T Consensus 26 fl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d-~~~ 104 (223)
T 3dfz_A 26 MLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATND-QAV 104 (223)
T ss_dssp EECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCC-THH
T ss_pred EEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCC-HHH
Confidence 3579999999999999999999999999999999999876532 222234432 2 24567889999987653 332
Q ss_pred HhhccHHHHhccCCCcEEEEcc
Q psy6348 167 KNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 167 ~~li~~~~~~~mk~gailIN~a 188 (333)
+.......+ -.++||++
T Consensus 105 ----N~~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 105 ----NKFVKQHIK-NDQLVNMA 121 (223)
T ss_dssp ----HHHHHHHSC-TTCEEEC-
T ss_pred ----HHHHHHHHh-CCCEEEEe
Confidence 333333345 45778873
No 217
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.52 E-value=0.00018 Score=67.91 Aligned_cols=101 Identities=12% Similarity=0.133 Sum_probs=67.0
Q ss_pred CEEEEEecChHHHHHHHHHhhC-CCEEE-EEcCCCCHHHHHhcCccc-cChhhhccCCCEEEEecCCchhhHhhccHHHH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF-GMKVI-GFDPMVSVEDAAKLNIAS-LGLEDIWPLADYITVHTPLIPQTKNLINAEVL 175 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~~~a~~~gv~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~ 175 (333)
.+|||||+|+||+.+++.+... +++++ ++|+..... .. .|+.. .++++++.++|+|++++|..... +...
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~~-~~-~gv~~~~d~~~ll~~~DvViiatp~~~h~-----~~~~ 76 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD-TK-TPVFDVADVDKHADDVDVLFLCMGSATDI-----PEQA 76 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS-SS-SCEEEGGGGGGTTTTCSEEEECSCTTTHH-----HHHH
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHHh-hc-CCCceeCCHHHHhcCCCEEEEcCCcHHHH-----HHHH
Confidence 3799999999999999998876 67754 678764331 11 45543 37888888899999999854322 2233
Q ss_pred hccCCCcEEEEccCCcc--cch-HhHHhhhhcCC
Q psy6348 176 KKCKKGVRVVNVARGGI--VDE-NALLDSLKCGH 206 (333)
Q Consensus 176 ~~mk~gailIN~aRg~~--vd~-~aL~~aL~~g~ 206 (333)
..++.|.-+|...-..+ -+. +.|.++.+++.
T Consensus 77 ~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~ 110 (320)
T 1f06_A 77 PKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAG 110 (320)
T ss_dssp HHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence 45677877776544432 222 45666666554
No 218
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.52 E-value=0.00028 Score=66.75 Aligned_cols=70 Identities=17% Similarity=0.257 Sum_probs=51.9
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCC-HHHHHhc--------C--ccccC------hhhhccCCC
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVS-VEDAAKL--------N--IASLG------LEDIWPLAD 154 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~-~~~a~~~--------g--v~~~~------l~ell~~aD 154 (333)
+.++.||++.|+|.|.+|+.++..|...|. +|++++|..+ .+.++++ + +...+ +.+.+.++|
T Consensus 149 ~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aD 228 (315)
T 3tnl_A 149 GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESV 228 (315)
T ss_dssp TCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred CCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCC
Confidence 457899999999999999999999999999 8999999732 3333221 2 11222 345567899
Q ss_pred EEEEecCC
Q psy6348 155 YITVHTPL 162 (333)
Q Consensus 155 vV~l~~P~ 162 (333)
+|+.++|.
T Consensus 229 iIINaTp~ 236 (315)
T 3tnl_A 229 IFTNATGV 236 (315)
T ss_dssp EEEECSST
T ss_pred EEEECccC
Confidence 99998884
No 219
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.50 E-value=0.0002 Score=67.32 Aligned_cols=66 Identities=17% Similarity=0.078 Sum_probs=49.0
Q ss_pred CEEEEEecChHHHHHHHHHhhC-CCEEE-EEcCCCCH--HHHHhcCcc--ccChhhhcc--CCCEEEEecCCch
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF-GMKVI-GFDPMVSV--EDAAKLNIA--SLGLEDIWP--LADYITVHTPLIP 164 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~gv~--~~~l~ell~--~aDvV~l~~P~t~ 164 (333)
.++||||+|.||+.+++.++.. +.++. ++|+.... +.+++.|+. +.++++++. +.|+|++++|...
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 79 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQD 79 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGG
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHH
Confidence 5899999999999999888765 56665 56886632 344556764 348999998 7999999999543
No 220
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.48 E-value=0.00028 Score=67.46 Aligned_cols=103 Identities=14% Similarity=0.141 Sum_probs=62.7
Q ss_pred CEEEEEecChHHHH-HHHHHhhC-CCEEE-EEcCCCCHHHHHhc-Cccc-cChhhhcc--CCCEEEEecCCchhhHhhcc
Q psy6348 99 KTLAVLGLGRIGRE-VALRMQAF-GMKVI-GFDPMVSVEDAAKL-NIAS-LGLEDIWP--LADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 99 ktvGIIGlG~IG~~-vA~~l~~~-G~~V~-~~d~~~~~~~a~~~-gv~~-~~l~ell~--~aDvV~l~~P~t~~t~~li~ 171 (333)
.++||||+|.||+. .+..++.. +++|. ++|+...... +.. ++.. .++++++. +.|+|++++|........
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~-~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~~-- 84 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVK-RDLPDVTVIASPEAAVQHPDVDLVVIASPNATHAPLA-- 84 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH-HHCTTSEEESCHHHHHTCTTCSEEEECSCGGGHHHHH--
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH-hhCCCCcEECCHHHHhcCCCCCEEEEeCChHHHHHHH--
Confidence 48999999999997 67777765 78876 5687543222 233 4443 48999998 799999999954432222
Q ss_pred HHHHhccCCCcEEEEcc--CCcccchHhHHhhhhcCCc
Q psy6348 172 AEVLKKCKKGVRVVNVA--RGGIVDENALLDSLKCGHC 207 (333)
Q Consensus 172 ~~~~~~mk~gailIN~a--Rg~~vd~~aL~~aL~~g~i 207 (333)
.+.++.|.-++.-- --.+-+.++|.++.++..+
T Consensus 85 ---~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~ 119 (364)
T 3e82_A 85 ---RLALNAGKHVVVDKPFTLDMQEARELIALAEEKQR 119 (364)
T ss_dssp ---HHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTC
T ss_pred ---HHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCC
Confidence 22334444343321 2233444556665555443
No 221
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.46 E-value=9.3e-05 Score=69.17 Aligned_cols=102 Identities=15% Similarity=0.205 Sum_probs=64.9
Q ss_pred CEEEEEecChHHHHHHHHHhhC-CCEEE-EEcCCCCHHHHHhcC--cc-ccChhhhcc--CCCEEEEecCCchhhHhhcc
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF-GMKVI-GFDPMVSVEDAAKLN--IA-SLGLEDIWP--LADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~~~a~~~g--v~-~~~l~ell~--~aDvV~l~~P~t~~t~~li~ 171 (333)
.++||||+|.||+.+++.+... +.+++ ++|+.. +.+++.. +. +.+++++++ ++|+|++++|.......
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~--~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~--- 85 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNP--DNLALVPPGCVIESDWRSVVSAPEVEAVIIATPPATHAEI--- 85 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCH--HHHTTCCTTCEEESSTHHHHTCTTCCEEEEESCGGGHHHH---
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCH--HHHHHHHhhCcccCCHHHHhhCCCCCEEEEeCChHHHHHH---
Confidence 4899999999999999999875 67754 788853 3332221 32 237899985 79999999994332221
Q ss_pred HHHHhccCCCc-EEEEc-cCCcccchHhHHhhhhcCCc
Q psy6348 172 AEVLKKCKKGV-RVVNV-ARGGIVDENALLDSLKCGHC 207 (333)
Q Consensus 172 ~~~~~~mk~ga-ilIN~-aRg~~vd~~aL~~aL~~g~i 207 (333)
..+.++.|. +++.- .--.+-+.++|.++.++..+
T Consensus 86 --~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~ 121 (315)
T 3c1a_A 86 --TLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGV 121 (315)
T ss_dssp --HHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCC
T ss_pred --HHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCC
Confidence 223355664 45542 22344455667777665444
No 222
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.44 E-value=0.0003 Score=68.32 Aligned_cols=123 Identities=20% Similarity=0.102 Sum_probs=93.0
Q ss_pred CCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCC-
Q psy6348 44 KGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGM- 122 (333)
Q Consensus 44 ~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~- 122 (333)
..|+|+|+. -.-+|=-+++-+++..| ..|..+...+|.|+|.|..|..+|+.+.++|.
T Consensus 155 ~~ipvf~DD---iqGTa~V~lAall~al~------------------l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~ 213 (398)
T 2a9f_A 155 CHIPVFHDD---QHGTAIVVLAAIFNSLK------------------LLKKSLDEVSIVVNGGGSAGLSITRKLLAAGAT 213 (398)
T ss_dssp CSSCEEEHH---HHHHHHHHHHHHHHHHH------------------TTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCC
T ss_pred CCcceecch---hhhHHHHHHHHHHHHHH------------------HhCCCCCccEEEEECCCHHHHHHHHHHHHcCCC
Confidence 369999952 34556667777776666 24567888999999999999999999999999
Q ss_pred EEEEEcCCC--CH-----------HHHHhcCc--cccChhhhccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEc
Q psy6348 123 KVIGFDPMV--SV-----------EDAAKLNI--ASLGLEDIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNV 187 (333)
Q Consensus 123 ~V~~~d~~~--~~-----------~~a~~~gv--~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~ 187 (333)
+|+.+|+.- .. ..+..... ...+|+|+++.+|+++=.- +-+++.++.++.|+++++++.+
T Consensus 214 ~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG~S-----apgl~T~EmVk~Ma~~pIIfal 288 (398)
T 2a9f_A 214 KVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFIGVS-----APGVLKAEWISKMAARPVIFAM 288 (398)
T ss_dssp EEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEEECC-----STTCCCHHHHHTSCSSCEEEEC
T ss_pred eEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEEecC-----CCCCCCHHHHHhhCCCCEEEEC
Confidence 999999762 00 11111111 1236999999999887652 3689999999999999999999
Q ss_pred cCCcc
Q psy6348 188 ARGGI 192 (333)
Q Consensus 188 aRg~~ 192 (333)
|+...
T Consensus 289 sNPt~ 293 (398)
T 2a9f_A 289 ANPIP 293 (398)
T ss_dssp CSSSC
T ss_pred CCCCc
Confidence 98653
No 223
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.44 E-value=0.00027 Score=64.87 Aligned_cols=98 Identities=13% Similarity=0.199 Sum_probs=70.1
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCCEE-EEEcCCCCHHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhccHHH
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGMKV-IGFDPMVSVEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLINAEV 174 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~~V-~~~d~~~~~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~~~ 174 (333)
+-.+|+++|+|.||+.+++. . ++++ .+|+ .. ..++|+... ++++++.++|+|+-|.+. .-+.+..
T Consensus 11 ~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~-~k----~gelgv~a~~d~d~lla~pD~VVe~A~~-----~av~e~~ 77 (253)
T 1j5p_A 11 HHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD-RI----SKDIPGVVRLDEFQVPSDVSTVVECASP-----EAVKEYS 77 (253)
T ss_dssp CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC-SS----CCCCSSSEECSSCCCCTTCCEEEECSCH-----HHHHHHH
T ss_pred ccceEEEECcCHHHHHHHhc--C-CcEEEEEEe-cc----ccccCceeeCCHHHHhhCCCEEEECCCH-----HHHHHHH
Confidence 45799999999999999988 4 7876 4566 22 112366543 799999999999988741 1233345
Q ss_pred HhccCCCcEEEEccCCcccch---HhHHhhhhcCCc
Q psy6348 175 LKKCKKGVRVVNVARGGIVDE---NALLDSLKCGHC 207 (333)
Q Consensus 175 ~~~mk~gailIN~aRg~~vd~---~aL~~aL~~g~i 207 (333)
...++.|.-+|-+|-|.+.|. +.|.++.++|.-
T Consensus 78 ~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~ 113 (253)
T 1j5p_A 78 LQILKNPVNYIIISTSAFADEVFRERFFSELKNSPA 113 (253)
T ss_dssp HHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSC
T ss_pred HHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCC
Confidence 566899999999998888876 445555555543
No 224
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.43 E-value=0.00054 Score=62.45 Aligned_cols=80 Identities=15% Similarity=0.175 Sum_probs=56.2
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEE-EcCCCCHHHHHhcCcccc-ChhhhccCCCEEEEecCCchhhHhhccHHHHh
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIG-FDPMVSVEDAAKLNIASL-GLEDIWPLADYITVHTPLIPQTKNLINAEVLK 176 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~-~d~~~~~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~ 176 (333)
.+|+|+|+|+||+.+++.+...+.++.+ +|+.... ..|+... ++++++ ++|+++-.++ .+.+.. .+.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~----~~gv~v~~dl~~l~-~~DVvIDft~-p~a~~~-----~~~ 72 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA----TTPYQQYQHIADVK-GADVAIDFSN-PNLLFP-----LLD 72 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC------CCSCBCSCTTTCT-TCSEEEECSC-HHHHHH-----HHT
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc----cCCCceeCCHHHHh-CCCEEEEeCC-hHHHHH-----HHH
Confidence 5899999999999999999877667665 7886542 3566554 788888 9999884443 122222 223
Q ss_pred ccCCCcEEEEccCC
Q psy6348 177 KCKKGVRVVNVARG 190 (333)
Q Consensus 177 ~mk~gailIN~aRg 190 (333)
++.|.-+|....|
T Consensus 73 -l~~g~~vVigTTG 85 (243)
T 3qy9_A 73 -EDFHLPLVVATTG 85 (243)
T ss_dssp -SCCCCCEEECCCS
T ss_pred -HhcCCceEeCCCC
Confidence 7788777766666
No 225
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.42 E-value=0.00082 Score=62.64 Aligned_cols=93 Identities=17% Similarity=0.189 Sum_probs=59.7
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCC--EEEEEcCCCCHHH--HH--hcCc------cc--cChhhhccCCCEEEEecCCc
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGM--KVIGFDPMVSVED--AA--KLNI------AS--LGLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a~--~~gv------~~--~~l~ell~~aDvV~l~~P~t 163 (333)
.++|+|||.|.||..+|..|...|+ +|..+|+...... +. ..+. .. .+-.+.++.||+|+++++..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v~~~ 86 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPR 86 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECCCCC
Confidence 4699999999999999999998898 9999998642211 11 1222 11 11235678999999999532
Q ss_pred hh---hH--------hh---ccHHHHhccCCCcEEEEccCCc
Q psy6348 164 PQ---TK--------NL---INAEVLKKCKKGVRVVNVARGG 191 (333)
Q Consensus 164 ~~---t~--------~l---i~~~~~~~mk~gailIN~aRg~ 191 (333)
.. ++ .+ +-+. +....+++++|+++-|-
T Consensus 87 ~~~g~~r~~~~~~n~~~~~~~~~~-i~~~~~~~~vi~~~Np~ 127 (319)
T 1lld_A 87 QKPGQSRLELVGATVNILKAIMPN-LVKVAPNAIYMLITNPV 127 (319)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHH-HHHHCTTSEEEECCSSH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH-HHHhCCCceEEEecCch
Confidence 11 10 11 1112 22236888999886653
No 226
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.42 E-value=0.00031 Score=62.60 Aligned_cols=86 Identities=10% Similarity=0.038 Sum_probs=59.6
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhcCcccc--------Chhhh-ccCCCEEEEecCCchhhH
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKLNIASL--------GLEDI-WPLADYITVHTPLIPQTK 167 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~gv~~~--------~l~el-l~~aDvV~l~~P~t~~t~ 167 (333)
.+++.|+|+|.+|+.+|+.|...|+ |+++|+.... +... .|+... .++++ +.++|.|++++|... .
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~--~ 84 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDS--E 84 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHH--H
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcH--H
Confidence 4689999999999999999999999 9999987533 2233 554432 23334 789999999998543 3
Q ss_pred hhccHHHHhccCCCcEEEEc
Q psy6348 168 NLINAEVLKKCKKGVRVVNV 187 (333)
Q Consensus 168 ~li~~~~~~~mk~gailIN~ 187 (333)
++.-......+.++..+|--
T Consensus 85 n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 85 TIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp HHHHHHHHHHHCSSSEEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEE
Confidence 34434555667777455443
No 227
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.42 E-value=0.00021 Score=67.51 Aligned_cols=67 Identities=16% Similarity=0.174 Sum_probs=50.5
Q ss_pred CEEEEEecChHHHHHHHHHh-h-CCCEEE-EEcCCCCH--HHHHhcC--ccc-cChhhhccC--CCEEEEecCCchh
Q psy6348 99 KTLAVLGLGRIGREVALRMQ-A-FGMKVI-GFDPMVSV--EDAAKLN--IAS-LGLEDIWPL--ADYITVHTPLIPQ 165 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~-~-~G~~V~-~~d~~~~~--~~a~~~g--v~~-~~l~ell~~--aDvV~l~~P~t~~ 165 (333)
.++||||+|.||+..++.++ . -++++. ++|+.... +.+++.| ... .++++++++ .|+|++++|....
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 79 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAH 79 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhH
Confidence 38999999999999999988 5 477876 57886532 2345567 333 489999876 9999999995443
No 228
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=97.38 E-value=0.00041 Score=68.44 Aligned_cols=109 Identities=22% Similarity=0.219 Sum_probs=79.9
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCC---EEEEEc----CC--CCHH-H---HHh--------cCc--cccChhhh
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGM---KVIGFD----PM--VSVE-D---AAK--------LNI--ASLGLEDI 149 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~---~V~~~d----~~--~~~~-~---a~~--------~gv--~~~~l~el 149 (333)
|..+.++++.|+|.|..|+.++..|...|. +|+.+| +. .... . ... .+. ...++.+.
T Consensus 181 g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~ 260 (439)
T 2dvm_A 181 GKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEA 260 (439)
T ss_dssp TCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHH
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHH
Confidence 456889999999999999999999999998 799999 76 2111 1 111 111 12368888
Q ss_pred ccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCC
Q psy6348 150 WPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGH 206 (333)
Q Consensus 150 l~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~ 206 (333)
++++|+|+.++|..+ +++.++.++.|+++.++++++.. ..+.-+.+|.+.|.
T Consensus 261 l~~aDVlInaT~~~~---G~~~~e~v~~m~~~~iVfDLynP--~~t~~~~~A~~~G~ 312 (439)
T 2dvm_A 261 LKDADVLISFTRPGP---GVIKPQWIEKMNEDAIVFPLANP--VPEILPEEAKKAGA 312 (439)
T ss_dssp HTTCSEEEECSCCCS---SSSCHHHHTTSCTTCEEEECCSS--SCSSCHHHHHHHTC
T ss_pred hccCCEEEEcCCCcc---CCCChHHHHhcCCCCEEEECCCC--CCcchHHHHHHcCC
Confidence 999999999988522 55666677889999999999544 35666666666664
No 229
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.38 E-value=0.00023 Score=67.22 Aligned_cols=70 Identities=23% Similarity=0.344 Sum_probs=51.2
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCC-HHHHHh----c----Cc--cccCh------hhhccCCC
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVS-VEDAAK----L----NI--ASLGL------EDIWPLAD 154 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~-~~~a~~----~----gv--~~~~l------~ell~~aD 154 (333)
+.++.||++.|+|.|.+|+.++..|...|. +|++++|..+ .+.+++ . +. ...++ .+.+.++|
T Consensus 143 ~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~D 222 (312)
T 3t4e_A 143 GFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASAD 222 (312)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCS
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCce
Confidence 457899999999999999999999999998 8999999732 222221 1 21 12222 34567888
Q ss_pred EEEEecCC
Q psy6348 155 YITVHTPL 162 (333)
Q Consensus 155 vV~l~~P~ 162 (333)
+|+.++|.
T Consensus 223 iIINaTp~ 230 (312)
T 3t4e_A 223 ILTNGTKV 230 (312)
T ss_dssp EEEECSST
T ss_pred EEEECCcC
Confidence 88888884
No 230
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.37 E-value=0.0004 Score=65.24 Aligned_cols=89 Identities=16% Similarity=0.218 Sum_probs=57.4
Q ss_pred CEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCCHHHH--Hhc---------C--ccc-cChhhhccCCCEEEEecCCc
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVSVEDA--AKL---------N--IAS-LGLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a--~~~---------g--v~~-~~l~ell~~aDvV~l~~P~t 163 (333)
++|+|||.|.||..+|..+...|+ +|..+|........ .++ . +.. .+. +.+++||+|+++++..
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~p 81 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGAP 81 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 589999999999999999998887 99999986532211 110 1 112 245 6789999999998532
Q ss_pred hhhHhh-----------ccHH---HHhccCCCcEEEEccC
Q psy6348 164 PQTKNL-----------INAE---VLKKCKKGVRVVNVAR 189 (333)
Q Consensus 164 ~~t~~l-----------i~~~---~~~~mk~gailIN~aR 189 (333)
...++ +-++ .+....|++++++++-
T Consensus 82 -~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN 120 (309)
T 1ur5_A 82 -RKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNN 120 (309)
T ss_dssp --------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCS
T ss_pred -CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCC
Confidence 11111 1112 2233358899999754
No 231
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.37 E-value=0.00054 Score=65.17 Aligned_cols=105 Identities=14% Similarity=0.151 Sum_probs=67.3
Q ss_pred CEEEEEecChHHHHHHHHHhhC-CCEEE-EEcCCCCH--HHHHhcCc----c-ccChhhhcc--CCCEEEEecCCchhhH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF-GMKVI-GFDPMVSV--EDAAKLNI----A-SLGLEDIWP--LADYITVHTPLIPQTK 167 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~gv----~-~~~l~ell~--~aDvV~l~~P~t~~t~ 167 (333)
.++||||+|.||+.+++.+... +++++ ++|+.... +.+++.|+ . +.+++++++ +.|+|++++|.....
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~- 85 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHV- 85 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGHH-
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHHHH-
Confidence 4899999999999999988875 66764 67876522 23445563 2 247899986 599999999943322
Q ss_pred hhccHHHHhccCCCcEEE-Ec-cCCcccchHhHHhhhhcCCce
Q psy6348 168 NLINAEVLKKCKKGVRVV-NV-ARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 168 ~li~~~~~~~mk~gailI-N~-aRg~~vd~~aL~~aL~~g~i~ 208 (333)
+-..+.++.|.-++ .- -.-.+-+.++|.++.++..+.
T Consensus 86 ----~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~ 124 (362)
T 1ydw_A 86 ----EWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQ 124 (362)
T ss_dssp ----HHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCC
T ss_pred ----HHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCE
Confidence 22223456665444 32 122334456677777766554
No 232
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=97.37 E-value=0.0016 Score=61.08 Aligned_cols=129 Identities=17% Similarity=0.143 Sum_probs=91.6
Q ss_pred hhHhhCCcEEEEC-CCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEec---ChHHHHHH
Q psy6348 39 TAATRKGVLVLNA-PGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGL---GRIGREVA 114 (333)
Q Consensus 39 ~aa~~~gI~V~n~-p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGl---G~IG~~vA 114 (333)
+.|...+|+|+|. -|....++- +++=++.+.++ .| .+.|+||++||= +++..+++
T Consensus 110 ~la~~~~vPVINaG~g~~~HPtQ--~LaDl~Ti~e~------------------~g-~l~gl~va~vGD~~~~rva~Sl~ 168 (299)
T 1pg5_A 110 FASEISDIPVINAGDGKHEHPTQ--AVIDIYTINKH------------------FN-TIDGLVFALLGDLKYARTVNSLL 168 (299)
T ss_dssp HHHHHCSSCEEEEEETTTBCHHH--HHHHHHHHHHH------------------HS-CSTTCEEEEEECCSSCHHHHHHH
T ss_pred HHHHhCCCCEEeCCCCCCcCcHH--HHHHHHHHHHH------------------hC-CcCCcEEEEECCCCCCchHHHHH
Confidence 3455678999998 666666654 33334433331 11 378999999998 59999999
Q ss_pred HHHhhC-CCEEEEEcCCC---CHHHHHhcCccc---cChhhhccCCCEEEEecCCch------hh-----HhhccHHHHh
Q psy6348 115 LRMQAF-GMKVIGFDPMV---SVEDAAKLNIAS---LGLEDIWPLADYITVHTPLIP------QT-----KNLINAEVLK 176 (333)
Q Consensus 115 ~~l~~~-G~~V~~~d~~~---~~~~a~~~gv~~---~~l~ell~~aDvV~l~~P~t~------~t-----~~li~~~~~~ 176 (333)
..+..+ |++|....|.. .....++.|..+ .+++|+++++|+|..-.=-.+ +. .-.++.+.++
T Consensus 169 ~~~~~~~g~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~ 248 (299)
T 1pg5_A 169 RILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLAN 248 (299)
T ss_dssp HHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHHH
T ss_pred HHHHhCCCCEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCcccccccCHHHHHHhhcCcccCHHHHH
Confidence 999999 99999998853 223234556543 379999999999988654321 11 1345788889
Q ss_pred ccCCCcEEEEcc
Q psy6348 177 KCKKGVRVVNVA 188 (333)
Q Consensus 177 ~mk~gailIN~a 188 (333)
.+|++++|..|.
T Consensus 249 ~a~~~ai~mH~l 260 (299)
T 1pg5_A 249 KMKKDSIILHPL 260 (299)
T ss_dssp TSCTTCEEECCS
T ss_pred hcCCCCEEECCC
Confidence 999999999984
No 233
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.37 E-value=0.00066 Score=63.82 Aligned_cols=104 Identities=11% Similarity=0.072 Sum_probs=65.6
Q ss_pred CEEEEEecChHHH-HHHHHHhhCCCEE-EEEcCCCC--HHHHHhc-Cccc-cChhhhcc--CCCEEEEecCCchhhHhhc
Q psy6348 99 KTLAVLGLGRIGR-EVALRMQAFGMKV-IGFDPMVS--VEDAAKL-NIAS-LGLEDIWP--LADYITVHTPLIPQTKNLI 170 (333)
Q Consensus 99 ktvGIIGlG~IG~-~vA~~l~~~G~~V-~~~d~~~~--~~~a~~~-gv~~-~~l~ell~--~aDvV~l~~P~t~~t~~li 170 (333)
.++||||+|.+|. .++..++..|+++ .++|+... .+.++++ +... .+++++++ +.|+|++++|.......
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~-- 82 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDRAEL-- 82 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGHHHH--
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhHHHH--
Confidence 4899999999996 6777777778996 46788763 3344555 4443 48999987 69999999995433222
Q ss_pred cHHHHhccCCCc-EEEEc-cCCcccchHhHHhhhhcCCc
Q psy6348 171 NAEVLKKCKKGV-RVVNV-ARGGIVDENALLDSLKCGHC 207 (333)
Q Consensus 171 ~~~~~~~mk~ga-ilIN~-aRg~~vd~~aL~~aL~~g~i 207 (333)
..+.++.|. +++.- ..-.+-+.++|.++.++..+
T Consensus 83 ---~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~ 118 (336)
T 2p2s_A 83 ---ALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGR 118 (336)
T ss_dssp ---HHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCC
T ss_pred ---HHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCC
Confidence 223344554 44442 22233444556666655443
No 234
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.36 E-value=0.00033 Score=66.78 Aligned_cols=67 Identities=15% Similarity=0.218 Sum_probs=51.5
Q ss_pred CCEEEEEecChHHHHHHHHHh-h-CCCEEE-EEcCCCCH--HHHHhcC--ccc-cChhhhcc--CCCEEEEecCCch
Q psy6348 98 GKTLAVLGLGRIGREVALRMQ-A-FGMKVI-GFDPMVSV--EDAAKLN--IAS-LGLEDIWP--LADYITVHTPLIP 164 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~-~-~G~~V~-~~d~~~~~--~~a~~~g--v~~-~~l~ell~--~aDvV~l~~P~t~ 164 (333)
-.++||||+|.||+..++.+. . -+++++ ++|+.... +.+++.| ... .++++++. +.|+|++++|...
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 99 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEA 99 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHH
Confidence 458999999999999999887 4 478876 58987744 3345567 333 48999987 5899999999544
No 235
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=97.34 E-value=0.00043 Score=68.46 Aligned_cols=102 Identities=22% Similarity=0.253 Sum_probs=71.5
Q ss_pred ccccCCCEEEEEecC----------hHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhc-Ccccc-ChhhhccCCCEEEEec
Q psy6348 93 GTELYGKTLAVLGLG----------RIGREVALRMQAFGMKVIGFDPMVSVEDAAKL-NIASL-GLEDIWPLADYITVHT 160 (333)
Q Consensus 93 g~~l~gktvGIIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~-gv~~~-~l~ell~~aDvV~l~~ 160 (333)
+..+.|++|+|+|+- .-...+++.|...|.+|.+|||....+..+.+ ++.++ ++++.++++|.|++++
T Consensus 317 ~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t 396 (446)
T 4a7p_A 317 GGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVEQASKMLTDVEFVENPYAAADGADALVIVT 396 (446)
T ss_dssp TSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHHHHGGGCSSCCBCSCHHHHHTTBSEEEECS
T ss_pred cccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCHhHHHhcCCceEecChhHHhcCCCEEEEee
Confidence 446889999999997 56788999999999999999998743322333 56555 6789999999999998
Q ss_pred CCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhH
Q psy6348 161 PLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENAL 198 (333)
Q Consensus 161 P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL 198 (333)
+- ++-+.+=-....+.|+. .+++|. |+ +.+.+.+
T Consensus 397 ~~-~~f~~~d~~~~~~~~~~-~~i~D~-r~-~~~~~~~ 430 (446)
T 4a7p_A 397 EW-DAFRALDLTRIKNSLKS-PVLVDL-RN-IYPPAEL 430 (446)
T ss_dssp CC-TTTTSCCHHHHHTTBSS-CBEECS-SC-CSCHHHH
T ss_pred CC-HHhhcCCHHHHHHhcCC-CEEEEC-CC-CCCHHHH
Confidence 73 33333322334455654 678885 54 3444443
No 236
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.33 E-value=0.00033 Score=68.71 Aligned_cols=103 Identities=14% Similarity=0.165 Sum_probs=64.2
Q ss_pred CEEEEEecChHHH-HHHHHHhhC-CCEE-EEEcCCCCH--HHHHhcCcc------ccChhhhcc--CCCEEEEecCCchh
Q psy6348 99 KTLAVLGLGRIGR-EVALRMQAF-GMKV-IGFDPMVSV--EDAAKLNIA------SLGLEDIWP--LADYITVHTPLIPQ 165 (333)
Q Consensus 99 ktvGIIGlG~IG~-~vA~~l~~~-G~~V-~~~d~~~~~--~~a~~~gv~------~~~l~ell~--~aDvV~l~~P~t~~ 165 (333)
.+|||||+|.||+ .+++.+... ++++ .++|+.... +.+++.|+. +.++++++. +.|+|++++|....
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~~h 163 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLH 163 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGGH
T ss_pred eEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCchhH
Confidence 4899999999997 899888765 5776 467886522 234455664 348999987 79999999995433
Q ss_pred hHhhccHHHHhccCCCc-EEEEc-cCCcccchHhHHhhhhcCC
Q psy6348 166 TKNLINAEVLKKCKKGV-RVVNV-ARGGIVDENALLDSLKCGH 206 (333)
Q Consensus 166 t~~li~~~~~~~mk~ga-ilIN~-aRg~~vd~~aL~~aL~~g~ 206 (333)
... ....++.|. +++.- .--.+-+.++|.++.++..
T Consensus 164 ~~~-----~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g 201 (433)
T 1h6d_A 164 AEF-----AIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAAN 201 (433)
T ss_dssp HHH-----HHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHT
T ss_pred HHH-----HHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhC
Confidence 222 223345554 44432 1223334445666555433
No 237
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=97.32 E-value=0.0034 Score=59.10 Aligned_cols=128 Identities=18% Similarity=0.140 Sum_probs=89.2
Q ss_pred hHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEecC--hHHHHHHHHH
Q psy6348 40 AATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLG--RIGREVALRM 117 (333)
Q Consensus 40 aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~l 117 (333)
.|.-.+|+|+|.-+....++- +++=++.+.++ .| .+.|+||++||=| ++..+++..+
T Consensus 111 lA~~~~vPVINa~~~~~HPtQ--aLaDl~Ti~e~------------------~g-~l~gl~va~vGD~~~rva~Sl~~~~ 169 (307)
T 2i6u_A 111 MASVATVPVINALSDEFHPCQ--VLADLQTIAER------------------KG-ALRGLRLSYFGDGANNMAHSLLLGG 169 (307)
T ss_dssp HHHHCSSCEEESCCSSCCHHH--HHHHHHHHHHH------------------HS-CCTTCEEEEESCTTSHHHHHHHHHH
T ss_pred HHhhCCCCEEcCCCCCcCccH--HHHHHHHHHHH------------------hC-CcCCeEEEEECCCCcCcHHHHHHHH
Confidence 445568999998765555654 34444443331 11 4789999999986 9999999999
Q ss_pred hhCCCEEEEEcCCC---CHHH---H----HhcCc--cc-cChhhhccCCCEEEEecCC-------chh-----hHhhccH
Q psy6348 118 QAFGMKVIGFDPMV---SVED---A----AKLNI--AS-LGLEDIWPLADYITVHTPL-------IPQ-----TKNLINA 172 (333)
Q Consensus 118 ~~~G~~V~~~d~~~---~~~~---a----~~~gv--~~-~~l~ell~~aDvV~l~~P~-------t~~-----t~~li~~ 172 (333)
..+|++|....|.. ..+. + ++.|. +. .+++|.++++|+|..-+=. .++ ..-.++.
T Consensus 170 ~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~ 249 (307)
T 2i6u_A 170 VTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQENDGLDRVKPFRPFQLNS 249 (307)
T ss_dssp HHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCTTSCCCSSGGGGGGCBCH
T ss_pred HHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEecceecCCcccchHHHHHHHhhcCCCH
Confidence 99999999998854 2211 1 24563 33 3799999999999984320 011 1234588
Q ss_pred HHHhccCCCcEEEEcc
Q psy6348 173 EVLKKCKKGVRVVNVA 188 (333)
Q Consensus 173 ~~~~~mk~gailIN~a 188 (333)
+.++.+|++++|..|.
T Consensus 250 ~~l~~a~~~ai~mH~l 265 (307)
T 2i6u_A 250 RLLALADSDAIVLHCL 265 (307)
T ss_dssp HHHHHSCTTCEEEECS
T ss_pred HHHhhcCCCcEEECCC
Confidence 8889999999999984
No 238
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=97.29 E-value=0.0028 Score=59.46 Aligned_cols=128 Identities=16% Similarity=0.015 Sum_probs=89.1
Q ss_pred hHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEec-ChHHHHHHHHHh
Q psy6348 40 AATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGL-GRIGREVALRMQ 118 (333)
Q Consensus 40 aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGl-G~IG~~vA~~l~ 118 (333)
.|...+|+|+|.-+....++- +++=++.+.++ .| .+.|+||++||= +++..+++..+.
T Consensus 117 la~~~~vPVINa~~~~~HPtQ--aLaDl~Ti~e~------------------~g-~l~gl~ia~vGD~~rva~Sl~~~~~ 175 (301)
T 2ef0_A 117 LARHAKVPVVNALSDRAHPLQ--ALADLLTLKEV------------------FG-GLAGLEVAWVGDGNNVLNSLLEVAP 175 (301)
T ss_dssp HHHHCSSCEEEEECSSCCHHH--HHHHHHHHHHH------------------HS-CCTTCEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHCCCCEEeCCCCccCchH--HHHHHHHHHHH------------------hC-CcCCcEEEEECCCchhHHHHHHHHH
Confidence 445568999998765555654 34444443331 11 378999999997 899999999999
Q ss_pred hCCCEEEEEcCCC---CHHHHHhcCccc-cChhhhccCCCEEEEecCCc------hhh------HhhccHHHHhccCCCc
Q psy6348 119 AFGMKVIGFDPMV---SVEDAAKLNIAS-LGLEDIWPLADYITVHTPLI------PQT------KNLINAEVLKKCKKGV 182 (333)
Q Consensus 119 ~~G~~V~~~d~~~---~~~~a~~~gv~~-~~l~ell~~aDvV~l~~P~t------~~t------~~li~~~~~~~mk~ga 182 (333)
.+|++|....|.. ..+......++. .+++|.++++|+|..-.=.. ... .-.++.+.++.+|+++
T Consensus 176 ~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~~~~~~~~~~~y~v~~e~l~~a~~~a 255 (301)
T 2ef0_A 176 LAGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAEREKRLRDFQGFQVNGELLKLLRPEG 255 (301)
T ss_dssp HHTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC--------CHHHHHTTTCCBCHHHHTTSCTTC
T ss_pred HcCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccchhHHHHHhhccccCHHHHHhcCCCc
Confidence 9999999998854 222222223443 48999999999998843200 011 1345788899999999
Q ss_pred EEEEcc
Q psy6348 183 RVVNVA 188 (333)
Q Consensus 183 ilIN~a 188 (333)
++..|.
T Consensus 256 i~mHpl 261 (301)
T 2ef0_A 256 VFLHCL 261 (301)
T ss_dssp EEEECS
T ss_pred EEECCC
Confidence 999996
No 239
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=97.29 E-value=0.0016 Score=64.35 Aligned_cols=114 Identities=19% Similarity=0.185 Sum_probs=77.7
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEE--------cCCC-CHHH------------------HHhcCccccC
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGF--------DPMV-SVED------------------AAKLNIASLG 145 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~--------d~~~-~~~~------------------a~~~gv~~~~ 145 (333)
+.++.|||+.|=|+|++|+..|+.|...|.+|++. |+.- +.+. +.+.|.++++
T Consensus 230 ~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~ 309 (450)
T 4fcc_A 230 GMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLE 309 (450)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEE
T ss_pred CCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEec
Confidence 45789999999999999999999999999999874 4432 2221 1223444444
Q ss_pred hhhhc-cCCCEEEEecCCchhhHhhccHHHHhccCCC--cEEEEccCCcccchHhHHhhhhcCCceEEEecc
Q psy6348 146 LEDIW-PLADYITVHTPLIPQTKNLINAEVLKKCKKG--VRVVNVARGGIVDENALLDSLKCGHCGGAALDV 214 (333)
Q Consensus 146 l~ell-~~aDvV~l~~P~t~~t~~li~~~~~~~mk~g--ailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV 214 (333)
-++++ .+||+.+-|. +.+.|+.+....++.+ .++++.+-+..-.+ + .+.|.+..|. ++=|.
T Consensus 310 ~~~i~~~~~DI~iPcA-----l~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~e-A-~~iL~~rGIl-~~PD~ 373 (450)
T 4fcc_A 310 GQQPWSVPVDIALPCA-----TQNELDVDAAHQLIANGVKAVAEGANMPTTIE-A-TELFQQAGVL-FAPGK 373 (450)
T ss_dssp TCCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHTTCCEEECCSSSCBCHH-H-HHHHHHTTCE-EECHH
T ss_pred CcccccCCccEEeecc-----ccccccHHHHHHHHhcCceEEecCCCCCCCHH-H-HHHHHHCCCE-EEChH
Confidence 44544 4699988773 5678988888888753 46777776665433 3 3566666664 45454
No 240
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=97.28 E-value=0.0024 Score=60.83 Aligned_cols=129 Identities=16% Similarity=0.149 Sum_probs=90.4
Q ss_pred hHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEecC--hHHHHHHHHH
Q psy6348 40 AATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLG--RIGREVALRM 117 (333)
Q Consensus 40 aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~l 117 (333)
.|.-.+|+|.|.-+....++- +++=++.+.++ .|..+.|++|++||=| ++..+++..+
T Consensus 117 lA~~s~vPVINa~~~~~HPtQ--~LaDl~Ti~e~------------------~g~~l~gl~va~vGD~~~~va~Sl~~~~ 176 (335)
T 1dxh_A 117 LAKFAGVPVFNGLTDEYHPTQ--MLADVLTMREH------------------SDKPLHDISYAYLGDARNNMGNSLLLIG 176 (335)
T ss_dssp HHHHSSSCEEEEECSSCCHHH--HHHHHHHHHHT------------------CSSCGGGCEEEEESCCSSHHHHHHHHHH
T ss_pred HHHhCCCCEEcCCCCCCCcHH--HHHHHHHHHHH------------------cCCCcCCeEEEEecCCccchHHHHHHHH
Confidence 445678999998765555654 44444444332 1225789999999996 9999999999
Q ss_pred hhCCCEEEEEcCCC---CHHH---H----HhcCc--cc-cChhhhccCCCEEEEecCC--------chh-----hHhhcc
Q psy6348 118 QAFGMKVIGFDPMV---SVED---A----AKLNI--AS-LGLEDIWPLADYITVHTPL--------IPQ-----TKNLIN 171 (333)
Q Consensus 118 ~~~G~~V~~~d~~~---~~~~---a----~~~gv--~~-~~l~ell~~aDvV~l~~P~--------t~~-----t~~li~ 171 (333)
..+|++|....|.. ..+. + ++.|. +. .+++|.++++|+|..-+=. ..+ ..-.++
T Consensus 177 ~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~e~~~er~~~~~~y~v~ 256 (335)
T 1dxh_A 177 AKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVN 256 (335)
T ss_dssp HHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCSCSSSCGGGCHHHHHHHGGGCBC
T ss_pred HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeCCccccCccchhhHHHHHHhhcceeC
Confidence 99999999998753 2211 1 24563 33 3799999999999884320 011 113468
Q ss_pred HHHHhcc-CCCcEEEEcc
Q psy6348 172 AEVLKKC-KKGVRVVNVA 188 (333)
Q Consensus 172 ~~~~~~m-k~gailIN~a 188 (333)
.+.++.+ |++++|..|.
T Consensus 257 ~~ll~~a~~~~ai~mHcL 274 (335)
T 1dxh_A 257 MEIMKATGNPRAKFMHCL 274 (335)
T ss_dssp HHHHHTTCCSSCEEEECS
T ss_pred HHHHHhccCCCeEEECCC
Confidence 8899999 9999999994
No 241
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.28 E-value=0.00059 Score=64.41 Aligned_cols=115 Identities=17% Similarity=0.137 Sum_probs=68.2
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCC--EEEEEcCCCCH--HHHHhc--C------ccc-cChhhhccCCCEEEEecCCch
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGM--KVIGFDPMVSV--EDAAKL--N------IAS-LGLEDIWPLADYITVHTPLIP 164 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~--~~a~~~--g------v~~-~~l~ell~~aDvV~l~~P~t~ 164 (333)
..||+|||.|.+|..+|..+...|. +|..||..... ..+.++ + +.. .+-.+.+++||+|+++.+...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p~ 86 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANR 86 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 3689999999999999999988887 99999986422 112221 1 111 133567999999999987432
Q ss_pred hhHhh------------cc--HHHHhccCCCcEEEEccCCcccchHhHHhh--hhcCCceEEE--ec
Q psy6348 165 QTKNL------------IN--AEVLKKCKKGVRVVNVARGGIVDENALLDS--LKCGHCGGAA--LD 213 (333)
Q Consensus 165 ~t~~l------------i~--~~~~~~mk~gailIN~aRg~~vd~~aL~~a--L~~g~i~gaa--lD 213 (333)
..++ +. .+.+....|++++|+++-.-=+....+.+. +...++.|.+ ||
T Consensus 87 -k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~k~s~~p~~rviG~gt~Ld 152 (318)
T 1y6j_A 87 -KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMIQKWSGLPVGKVIGSGTVLD 152 (318)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHHHHHHHHTCCTTTEEECTTHHH
T ss_pred -CCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHcCCCHHHEeccCCchH
Confidence 1121 10 112233368999999744332333334333 3445777763 46
No 242
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=97.28 E-value=0.00029 Score=67.72 Aligned_cols=66 Identities=27% Similarity=0.432 Sum_probs=48.5
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCc----ccc---ChhhhccCCCEEEEe
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNI----ASL---GLEDIWPLADYITVH 159 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv----~~~---~l~ell~~aDvV~l~ 159 (333)
.-+.||||+|+|.|.+|+.+++.++.+|++|+++|++........... .+. .+.++++++|+|+..
T Consensus 10 ~~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~~ 82 (389)
T 3q2o_A 10 IILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTYE 82 (389)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeeec
Confidence 457899999999999999999999999999999998652211110110 111 256788899998764
No 243
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=97.26 E-value=0.00081 Score=66.49 Aligned_cols=95 Identities=16% Similarity=0.155 Sum_probs=67.7
Q ss_pred ccccCCCEEEEEecCh----------HHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcC--cccc-ChhhhccCCCEEEEe
Q psy6348 93 GTELYGKTLAVLGLGR----------IGREVALRMQAFGMKVIGFDPMVSVEDAAKLN--IASL-GLEDIWPLADYITVH 159 (333)
Q Consensus 93 g~~l~gktvGIIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g--v~~~-~l~ell~~aDvV~l~ 159 (333)
+..+.|++|+|+|+-- =...+++.|...|.+|.+|||....+....++ ++++ ++++.++.+|.|+++
T Consensus 313 ~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~ 392 (450)
T 3gg2_A 313 KGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHV 392 (450)
T ss_dssp TTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGSEECSSHHHHTTTCSCEEEC
T ss_pred cccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCcHHHHHhcCccceecCCHHHHhcCCCEEEEc
Confidence 3457899999999842 45789999999999999999987543333344 4554 678999999999999
Q ss_pred cCCchhhHhhccHHHHhccCCCcEEEEccCC
Q psy6348 160 TPLIPQTKNLINAEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 160 ~P~t~~t~~li~~~~~~~mk~gailIN~aRg 190 (333)
++ .++-+.+=-....+.|+ +.+++|. |+
T Consensus 393 t~-~~~f~~~~~~~~~~~~~-~~~i~D~-r~ 420 (450)
T 3gg2_A 393 TE-WKEFRMPDWSALSQAMA-ASLVIDG-RN 420 (450)
T ss_dssp SC-CGGGSSCCHHHHHHHSS-SCEEEES-SC
T ss_pred cC-CHHHhhcCHHHHHHhcC-CCEEEEC-CC
Confidence 87 34433332233445565 5688885 54
No 244
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.24 E-value=0.00079 Score=63.14 Aligned_cols=80 Identities=23% Similarity=0.260 Sum_probs=65.9
Q ss_pred CccccCCCEEEEEecCh-HHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhc
Q psy6348 92 TGTELYGKTLAVLGLGR-IGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLI 170 (333)
Q Consensus 92 ~g~~l~gktvGIIGlG~-IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li 170 (333)
.+.++.||++.|||-++ +|+.+|..|...+..|..+..+. .++.+.+++||+|+.++.. .+++
T Consensus 173 ~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T------------~dl~~~~~~ADIvV~A~G~----p~~i 236 (303)
T 4b4u_A 173 NNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRT------------QNLPELVKQADIIVGAVGK----AELI 236 (303)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHHTCSEEEECSCS----TTCB
T ss_pred HCCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCC------------CCHHHHhhcCCeEEeccCC----CCcc
Confidence 35689999999999865 69999999999999999887642 2578889999999999853 4567
Q ss_pred cHHHHhccCCCcEEEEccCC
Q psy6348 171 NAEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 171 ~~~~~~~mk~gailIN~aRg 190 (333)
..+. .|+|+++||++--
T Consensus 237 ~~d~---vk~GavVIDVGin 253 (303)
T 4b4u_A 237 QKDW---IKQGAVVVDAGFH 253 (303)
T ss_dssp CGGG---SCTTCEEEECCCB
T ss_pred cccc---ccCCCEEEEecee
Confidence 6654 6999999999753
No 245
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.21 E-value=0.0012 Score=62.33 Aligned_cols=113 Identities=14% Similarity=0.125 Sum_probs=69.4
Q ss_pred CEEEEEecChHHHHHHHHHhhCCC--EEEEEcCCCCHHHHH--hc---------Cccc--cChhhhccCCCEEEEecCCc
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGM--KVIGFDPMVSVEDAA--KL---------NIAS--LGLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~a~--~~---------gv~~--~~l~ell~~aDvV~l~~P~t 163 (333)
++|+|||.|.||..+|..+...|+ +|..||......... ++ .... .+..+.+++||+|+++.+..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 489999999999999999887777 999999876432211 11 1222 24678899999999997643
Q ss_pred hh-----------hHhhcc--HHHHhccCCCcEEEEccCCcccchHhHHhh--hhcCCceEEE
Q psy6348 164 PQ-----------TKNLIN--AEVLKKCKKGVRVVNVARGGIVDENALLDS--LKCGHCGGAA 211 (333)
Q Consensus 164 ~~-----------t~~li~--~~~~~~mk~gailIN~aRg~~vd~~aL~~a--L~~g~i~gaa 211 (333)
.. +..++. .+.+....|++++++++-.-=+....+.+. +...++.|.+
T Consensus 81 ~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd~~t~~~~k~~g~p~~rviG~~ 143 (314)
T 3nep_X 81 RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPLDVMTYVAYEASGFPTNRVMGMA 143 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSHHHHHHHHHHHHTCCGGGEEECC
T ss_pred CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCchhHHHHHHHHhcCCChHHEEeec
Confidence 11 111111 123344568899999985433333333332 2234566654
No 246
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=97.21 E-value=0.0012 Score=61.91 Aligned_cols=111 Identities=10% Similarity=0.113 Sum_probs=66.2
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCC--EEEEEcCCCC-HHHHH---hc---Cccc-cChhhhccCCCEEEEecCCc----
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGM--KVIGFDPMVS-VEDAA---KL---NIAS-LGLEDIWPLADYITVHTPLI---- 163 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~-~~~a~---~~---gv~~-~~l~ell~~aDvV~l~~P~t---- 163 (333)
.+||+|||.|.||..+|..+...|+ +|..||.... ...+. +. .+.. .++ +.+++||+|+++....
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~ 92 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGSSQ 92 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC----C
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCCCC
Confidence 3799999999999999998887788 9999998652 11111 11 1222 256 6789999999997321
Q ss_pred ------hhhHhhc---cHHHHhccCCCcEEEEccCCcccchHhHHhh--hhcCCceEE
Q psy6348 164 ------PQTKNLI---NAEVLKKCKKGVRVVNVARGGIVDENALLDS--LKCGHCGGA 210 (333)
Q Consensus 164 ------~~t~~li---~~~~~~~mk~gailIN~aRg~~vd~~aL~~a--L~~g~i~ga 210 (333)
..+..++ -++.-+ ..|++++++++-.--+-...+.+. +...++.|.
T Consensus 93 tR~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~sNP~~~~t~~~~~~~~~p~~rviG~ 149 (303)
T 2i6t_A 93 SYLDVVQSNVDMFRALVPALGH-YSQHSVLLVASQPVEIMTYVTWKLSTFPANRVIGI 149 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HTTTCEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEcCChHHHHHHHHHHhcCCCHHHeeCC
Confidence 1111111 122223 348999999876433333333332 223466666
No 247
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.21 E-value=0.00031 Score=63.96 Aligned_cols=90 Identities=21% Similarity=0.276 Sum_probs=64.5
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC-------------------CHHH-H----Hhc--Ccc--c-
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV-------------------SVED-A----AKL--NIA--S- 143 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-------------------~~~~-a----~~~--gv~--~- 143 (333)
..|.+++|.|||+|.+|+.+|+.|...|. ++..+|+.. .+.. + .+. +++ .
T Consensus 27 ~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 106 (249)
T 1jw9_B 27 EALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 106 (249)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence 35889999999999999999999999998 899999865 2211 1 111 121 1
Q ss_pred ---c---ChhhhccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEc
Q psy6348 144 ---L---GLEDIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNV 187 (333)
Q Consensus 144 ---~---~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~ 187 (333)
. +++++++++|+|+.+++ +.+++.++++...+. +..+|+.
T Consensus 107 ~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~~---~~p~i~~ 152 (249)
T 1jw9_B 107 NALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFAA---KVPLVSG 152 (249)
T ss_dssp CSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHHH---TCCEEEE
T ss_pred eccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHHc---CCCEEEe
Confidence 1 24567889999999997 577888887766543 3446665
No 248
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.18 E-value=0.00046 Score=64.96 Aligned_cols=66 Identities=18% Similarity=0.116 Sum_probs=49.6
Q ss_pred CEEEEEecChHHHHHHHHHhhCC---CEEE-EEcCCCCH--HHHHhcCcc--ccChhhhcc--CCCEEEEecCCch
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFG---MKVI-GFDPMVSV--EDAAKLNIA--SLGLEDIWP--LADYITVHTPLIP 164 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G---~~V~-~~d~~~~~--~~a~~~gv~--~~~l~ell~--~aDvV~l~~P~t~ 164 (333)
.++||||+|.||+..++.++..+ ++++ ++|+.... +.+++.|+. +.++++++. +.|+|++++|...
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 78 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQ 78 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGG
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHH
Confidence 48999999999999999998764 4555 47876522 334556763 348999997 6999999999543
No 249
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=97.17 E-value=0.0025 Score=60.39 Aligned_cols=114 Identities=15% Similarity=0.122 Sum_probs=68.4
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC--EEEEEcCCCCHHHH----HhcC-------ccc-cChhhhccCCCEEEEecCC
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM--KVIGFDPMVSVEDA----AKLN-------IAS-LGLEDIWPLADYITVHTPL 162 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~a----~~~g-------v~~-~~l~ell~~aDvV~l~~P~ 162 (333)
..++|+|||.|.||..+|..+...|+ +|..||........ ...+ +.. .+..+.+++||+|+++.+.
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~ 83 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGA 83 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEeccc
Confidence 35799999999999999999988787 99999985422111 1111 111 1335688999999999753
Q ss_pred c--h-hhH-hhc--c----H---HHHhccCCCcEEEEccCCcccchHhHHhh--hhcCCceEE
Q psy6348 163 I--P-QTK-NLI--N----A---EVLKKCKKGVRVVNVARGGIVDENALLDS--LKCGHCGGA 210 (333)
Q Consensus 163 t--~-~t~-~li--~----~---~~~~~mk~gailIN~aRg~~vd~~aL~~a--L~~g~i~ga 210 (333)
. + .++ .++ + + +.+....|++++++++-.-=+....+.+. +...++.|.
T Consensus 84 p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPvd~~t~~~~k~~g~p~~rviG~ 146 (326)
T 3pqe_A 84 NQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPVDILTYATWKFSGLPKERVIGS 146 (326)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChHHHHHHHHHHhcCCCHHHEEee
Confidence 2 1 111 111 1 1 22334568899999975433333333333 223355553
No 250
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.16 E-value=0.00063 Score=63.38 Aligned_cols=104 Identities=18% Similarity=0.276 Sum_probs=69.1
Q ss_pred CCEEEEEec-ChHHHHHHHHHhhCCCEEE-EEcCCCCHHHHHhcCcccc-Chhhhcc--CCCEEEEecCCchhhHhhccH
Q psy6348 98 GKTLAVLGL-GRIGREVALRMQAFGMKVI-GFDPMVSVEDAAKLNIASL-GLEDIWP--LADYITVHTPLIPQTKNLINA 172 (333)
Q Consensus 98 gktvGIIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~a~~~gv~~~-~l~ell~--~aDvV~l~~P~t~~t~~li~~ 172 (333)
..+|+|+|+ |++|+.+++.++..|++++ .+||....+ +..|+... +++++.. ..|++++++|. +.....+ .
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~--~~~G~~vy~sl~el~~~~~~D~viI~tP~-~~~~~~~-~ 82 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGT--THLGLPVFNTVREAVAATGATASVIYVPA-PFCKDSI-L 82 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHHCCCEEEECCCG-GGHHHHH-H
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccc--eeCCeeccCCHHHHhhcCCCCEEEEecCH-HHHHHHH-H
Confidence 468999999 9999999999998899854 567753211 13566544 7999988 89999999994 3333333 2
Q ss_pred HHHhccCCCc-EEEEccCCc-ccchHhHHhhhhcCCce
Q psy6348 173 EVLKKCKKGV-RVVNVARGG-IVDENALLDSLKCGHCG 208 (333)
Q Consensus 173 ~~~~~mk~ga-ilIN~aRg~-~vd~~aL~~aL~~g~i~ 208 (333)
+..+ .|. .+|..+.|- .-+.+.|.++.++..+.
T Consensus 83 ea~~---~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~ 117 (288)
T 2nu8_A 83 EAID---AGIKLIITITEGIPTLDMLTVKVKLDEAGVR 117 (288)
T ss_dssp HHHH---TTCSEEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 3322 332 344455543 33455788888776654
No 251
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=97.16 E-value=0.00044 Score=68.14 Aligned_cols=112 Identities=19% Similarity=0.209 Sum_probs=72.3
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC---H--HHHHhcCcccc---ChhhhccC-CCEEEEe--cCC
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS---V--EDAAKLNIASL---GLEDIWPL-ADYITVH--TPL 162 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~---~--~~a~~~gv~~~---~l~ell~~-aDvV~l~--~P~ 162 (333)
.++.||++.|||+|..|.++|+.|+..|++|.++|.... . +..++.|++.. ..++++.+ +|+|++. +|.
T Consensus 5 ~~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~ 84 (451)
T 3lk7_A 5 TTFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPY 84 (451)
T ss_dssp CTTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCT
T ss_pred hhcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCC
Confidence 357899999999999999999999999999999998542 1 34456687653 34456676 9999886 332
Q ss_pred -chhhH-----h--hccH-HHHhccCCCcE-EEEccCCcccchHhHHhhhhcC
Q psy6348 163 -IPQTK-----N--LINA-EVLKKCKKGVR-VVNVARGGIVDENALLDSLKCG 205 (333)
Q Consensus 163 -t~~t~-----~--li~~-~~~~~mk~gai-lIN~aRg~~vd~~aL~~aL~~g 205 (333)
++... + ++++ +.+..+.+..+ -|--+.|+--...-+...|+..
T Consensus 85 ~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~ 137 (451)
T 3lk7_A 85 NNPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAG 137 (451)
T ss_dssp TSHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHT
T ss_pred CChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhc
Confidence 22211 1 3333 33333333333 3333457666666666667653
No 252
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=97.16 E-value=0.0028 Score=59.90 Aligned_cols=115 Identities=18% Similarity=0.170 Sum_probs=69.2
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCCHHH--HHhc---------Cccc--cChhhhccCCCEEEEecCC
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVSVED--AAKL---------NIAS--LGLEDIWPLADYITVHTPL 162 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~--a~~~---------gv~~--~~l~ell~~aDvV~l~~P~ 162 (333)
..++|+|||.|.||..+|..+...|+ +|..||....... +.++ .... .+-.+.+++||+|+++.+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag~ 83 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAGV 83 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCCc
Confidence 35799999999999999999987777 9999998764321 1111 1111 2335789999999999653
Q ss_pred c--h-hhH--------hhcc--HHHHhccCCCcEEEEccCCcccchHhHHhh--hhcCCceEEE
Q psy6348 163 I--P-QTK--------NLIN--AEVLKKCKKGVRVVNVARGGIVDENALLDS--LKCGHCGGAA 211 (333)
Q Consensus 163 t--~-~t~--------~li~--~~~~~~mk~gailIN~aRg~~vd~~aL~~a--L~~g~i~gaa 211 (333)
. + .++ .++. .+.+....|++++++++-.-=+....+.+. +...++.|.+
T Consensus 84 p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd~~t~~~~k~sg~p~~rviG~~ 147 (321)
T 3p7m_A 84 PRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPLDIMVNMLQKFSGVPDNKIVGMA 147 (321)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEEEC
T ss_pred CCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCchHHHHHHHHHhcCCCHHHEEeec
Confidence 2 1 111 1111 112233458899999954322223333333 2234566655
No 253
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=97.15 E-value=0.00084 Score=63.41 Aligned_cols=111 Identities=14% Similarity=0.084 Sum_probs=67.5
Q ss_pred CEEEEEecChHHHHHHHHHhhCCC--EEEEEcCCCCHHH--HHhc--C------ccc-cChhhhccCCCEEEEecCCchh
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGM--KVIGFDPMVSVED--AAKL--N------IAS-LGLEDIWPLADYITVHTPLIPQ 165 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a~~~--g------v~~-~~l~ell~~aDvV~l~~P~t~~ 165 (333)
.||+|||.|.+|..++..+...+. ++..||....... +.++ . +.. .+..+.+++||+|+++.+...
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~- 84 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQ- 84 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC---
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCC-
Confidence 699999999999999998887666 8999998542111 1111 1 111 145677999999999986432
Q ss_pred hHh------------hcc--HHHHhccCCCcEEEEccCCcccchHhHHhh--hhcCCceEE
Q psy6348 166 TKN------------LIN--AEVLKKCKKGVRVVNVARGGIVDENALLDS--LKCGHCGGA 210 (333)
Q Consensus 166 t~~------------li~--~~~~~~mk~gailIN~aRg~~vd~~aL~~a--L~~g~i~ga 210 (333)
..+ ++. .+.+....|++++++++-.--+....+.+. +...++.|.
T Consensus 85 ~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~ 145 (318)
T 1ez4_A 85 KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFPKERVIGS 145 (318)
T ss_dssp --------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEec
Confidence 121 111 122333478999999844333333344443 444466666
No 254
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.15 E-value=0.00049 Score=68.48 Aligned_cols=93 Identities=17% Similarity=0.176 Sum_probs=58.2
Q ss_pred CCccccCCCEEEEEecChHHHHHHHHHhhC-CCEEEEEcCCCCH-HH-HHhcCccc--c------ChhhhccCCCEEEEe
Q psy6348 91 YTGTELYGKTLAVLGLGRIGREVALRMQAF-GMKVIGFDPMVSV-ED-AAKLNIAS--L------GLEDIWPLADYITVH 159 (333)
Q Consensus 91 ~~g~~l~gktvGIIGlG~IG~~vA~~l~~~-G~~V~~~d~~~~~-~~-a~~~gv~~--~------~l~ell~~aDvV~l~ 159 (333)
..+..+.++++.|+|.|.+|+.++..|... |.+|.+++|..+. +. +...++.. . ++.++++++|+|+.+
T Consensus 16 ~~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~ 95 (467)
T 2axq_A 16 HIEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISL 95 (467)
T ss_dssp -------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEEC
T ss_pred ccccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEEC
Confidence 445678899999999999999999999887 7899999996532 11 12223321 1 355678899999999
Q ss_pred cCCchhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 160 TPLIPQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 160 ~P~t~~t~~li~~~~~~~mk~gailIN~a 188 (333)
+|..... . +.. +.++.|..+++++
T Consensus 96 tp~~~~~-~-v~~---a~l~~g~~vvd~~ 119 (467)
T 2axq_A 96 IPYTFHP-N-VVK---SAIRTKTDVVTSS 119 (467)
T ss_dssp SCGGGHH-H-HHH---HHHHHTCEEEECS
T ss_pred CchhhhH-H-HHH---HHHhcCCEEEEee
Confidence 9954221 1 111 2234566666654
No 255
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=97.14 E-value=0.0022 Score=60.25 Aligned_cols=126 Identities=15% Similarity=0.159 Sum_probs=86.2
Q ss_pred hHhhCCcEEEECC-CCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEecC---hHHHHHHH
Q psy6348 40 AATRKGVLVLNAP-GGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLG---RIGREVAL 115 (333)
Q Consensus 40 aa~~~gI~V~n~p-~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG---~IG~~vA~ 115 (333)
.|...+|+|+|.- |....++- +++=++.+.++ .| .+.|+||++||=| ++..+++.
T Consensus 109 la~~~~vPVINagdg~~~HPtQ--aLaDl~Ti~e~------------------~g-~l~glkva~vGD~~~~rva~Sl~~ 167 (304)
T 3r7f_A 109 LVSQVNIPILNAGDGCGQHPTQ--SLLDLMTIYEE------------------FN-TFKGLTVSIHGDIKHSRVARSNAE 167 (304)
T ss_dssp HHHHCSSCEEESCCTTSCCHHH--HHHHHHHHHHH------------------HS-CCTTCEEEEESCCTTCHHHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCcCcHH--HHHHHHHHHHH------------------hC-CCCCCEEEEEcCCCCcchHHHHHH
Confidence 3455789999995 45555553 33333333221 12 3789999999975 79999999
Q ss_pred HHhhCCCEEEEEcCCC-CHHHHHhcCccccChhhhccCCCEEEEecCCch---------h--hHhhccHHHHhccCCCcE
Q psy6348 116 RMQAFGMKVIGFDPMV-SVEDAAKLNIASLGLEDIWPLADYITVHTPLIP---------Q--TKNLINAEVLKKCKKGVR 183 (333)
Q Consensus 116 ~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~---------~--t~~li~~~~~~~mk~gai 183 (333)
.+..+|++|....|.. .++ ....| ...+++|+++++|+|..-.--.+ + ..-.++.+.++.+|++++
T Consensus 168 ~~~~~G~~v~~~~P~~~~~~-~~~~g-~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai 245 (304)
T 3r7f_A 168 VLTRLGARVLFSGPSEWQDE-ENTFG-TYVSMDEAVESSDVVMLLRIQNERHQSAVSQEGYLNKYGLTVERAERMKRHAI 245 (304)
T ss_dssp HHHHTTCEEEEESCGGGSCT-TCSSC-EECCHHHHHHHCSEEEECCCCTTTCCSSCCSTTHHHHHSBCHHHHTTSCTTCE
T ss_pred HHHHcCCEEEEECCCccCcc-hhhcC-ccCCHHHHhCCCCEEEeccchhhccccchhHHHHhCCCccCHHHHhhcCCCCE
Confidence 9999999999988743 221 12233 23589999999999988532111 1 123468888999999999
Q ss_pred EEEcc
Q psy6348 184 VVNVA 188 (333)
Q Consensus 184 lIN~a 188 (333)
|..|.
T Consensus 246 ~mHcl 250 (304)
T 3r7f_A 246 IMHPA 250 (304)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 99984
No 256
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=97.14 E-value=0.0024 Score=60.74 Aligned_cols=130 Identities=14% Similarity=0.118 Sum_probs=89.8
Q ss_pred hHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEecC--hHHHHHHHHH
Q psy6348 40 AATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLG--RIGREVALRM 117 (333)
Q Consensus 40 aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~l 117 (333)
.|.-.+|+|.|.-+....++- +++=++.+.+++ .|..+.|.+|++||=| ++..+++..+
T Consensus 116 lA~~~~vPVINa~~~~~HPtQ--~LaDl~Ti~e~~-----------------~g~~l~gl~ia~vGD~~~~va~Sl~~~~ 176 (333)
T 1duv_G 116 LAEYASVPVWNGLTNEFHPTQ--LLADLLTMQEHL-----------------PGKAFNEMTLVYAGDARNNMGNSMLEAA 176 (333)
T ss_dssp HHHHHSSCEEESCCSSCCHHH--HHHHHHHHHHHS-----------------TTCCGGGCEEEEESCTTSHHHHHHHHHH
T ss_pred HHHhCCCCeEcCCCCCCCchH--HHHHHHHHHHHh-----------------cCCCCCCcEEEEECCCccchHHHHHHHH
Confidence 344568999998765555654 344444443321 1325789999999986 9999999999
Q ss_pred hhCCCEEEEEcCCC---CHHH-------HHhcCcc--c-cChhhhccCCCEEEEecCCc--------hh-----hHhhcc
Q psy6348 118 QAFGMKVIGFDPMV---SVED-------AAKLNIA--S-LGLEDIWPLADYITVHTPLI--------PQ-----TKNLIN 171 (333)
Q Consensus 118 ~~~G~~V~~~d~~~---~~~~-------a~~~gv~--~-~~l~ell~~aDvV~l~~P~t--------~~-----t~~li~ 171 (333)
..+|++|....|.. ..+. +++.|.. . .++++.++++|+|..-+=.. .+ ..-.++
T Consensus 177 ~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~~~~~er~~~~~~y~v~ 256 (333)
T 1duv_G 177 ALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQVN 256 (333)
T ss_dssp HHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBC
T ss_pred HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeCCccccCccccchHHHHHHhhccccC
Confidence 99999999998753 2211 1255633 2 37999999999999843200 11 113468
Q ss_pred HHHHhcc-CCCcEEEEcc
Q psy6348 172 AEVLKKC-KKGVRVVNVA 188 (333)
Q Consensus 172 ~~~~~~m-k~gailIN~a 188 (333)
.+.++.+ |++++|..|.
T Consensus 257 ~~ll~~a~~~~ai~mHcL 274 (333)
T 1duv_G 257 SKMMQLTGNPEVKFLHCL 274 (333)
T ss_dssp HHHHHTTCCTTCEEEECS
T ss_pred HHHHHhccCCCcEEECCC
Confidence 8899999 9999999994
No 257
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=97.13 E-value=0.0013 Score=61.93 Aligned_cols=113 Identities=13% Similarity=0.110 Sum_probs=68.6
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCC--EEEEEcCCCCHHH--HHhc---------Cccc-cChhhhccCCCEEEEecCCc
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGM--KVIGFDPMVSVED--AAKL---------NIAS-LGLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a~~~---------gv~~-~~l~ell~~aDvV~l~~P~t 163 (333)
..+|+|||.|.+|..+|..+...|. +|..||....... +..+ .+.. .+..+.+++||+|+++.+..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~~ 85 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGAA 85 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCCC
Confidence 4699999999999999998887674 8999997542111 1110 1111 14567799999999998643
Q ss_pred hh---hH--------hhcc--HHHHhccCCCcEEEEccCCcccchHhHHhh--hhcCCceEE
Q psy6348 164 PQ---TK--------NLIN--AEVLKKCKKGVRVVNVARGGIVDENALLDS--LKCGHCGGA 210 (333)
Q Consensus 164 ~~---t~--------~li~--~~~~~~mk~gailIN~aRg~~vd~~aL~~a--L~~g~i~ga 210 (333)
.. ++ .++. .+.+....|++++|+++-.--+....+.+. +...++.|.
T Consensus 86 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~k~~~~p~~rviG~ 147 (317)
T 3d0o_A 86 QKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPVDILAYATWKFSGLPKERVIGS 147 (317)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHhCCCHHHEEec
Confidence 21 11 1111 122333478999999864333333344443 344467666
No 258
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=97.13 E-value=0.00075 Score=64.42 Aligned_cols=88 Identities=22% Similarity=0.241 Sum_probs=63.5
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHH-hcCcccc----C---hhhhccCCCEEEEecCCchhhH
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VEDAA-KLNIASL----G---LEDIWPLADYITVHTPLIPQTK 167 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~-~~gv~~~----~---l~ell~~aDvV~l~~P~t~~t~ 167 (333)
.|++|.|+|.|.||...++.++.+|++|++.++... .+.+. ++|...+ + +.++....|+|+-++.....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~-- 264 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHP-- 264 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHH--
Confidence 689999999999999999999999999999998653 34444 6675421 1 23344567888888764321
Q ss_pred hhccHHHHhccCCCcEEEEccC
Q psy6348 168 NLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 168 ~li~~~~~~~mk~gailIN~aR 189 (333)
-...++.|+++..+|+++.
T Consensus 265 ---~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 265 ---LLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp ---SHHHHHHEEEEEEEEECCC
T ss_pred ---HHHHHHHHhcCCEEEEEcc
Confidence 1455677788888888764
No 259
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.12 E-value=0.0014 Score=60.51 Aligned_cols=65 Identities=23% Similarity=0.195 Sum_probs=48.9
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCCH--HHHHhcCcccc-ChhhhccCCCEEEEecCCc
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVSV--EDAAKLNIASL-GLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~--~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t 163 (333)
.++++.|+|.|.+|+.++..|...|. +|++++|+... +.+++.+..+. ++. +.++|+|+.++|..
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~g 186 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIG 186 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCC
Confidence 46899999999999999999999998 79999997532 23333444322 222 46899999999954
No 260
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.11 E-value=0.0014 Score=62.68 Aligned_cols=87 Identities=18% Similarity=0.174 Sum_probs=56.3
Q ss_pred cCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhcC----ccc---cChhhhccCCCEEEEecCCchhhH
Q psy6348 96 LYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKLN----IAS---LGLEDIWPLADYITVHTPLIPQTK 167 (333)
Q Consensus 96 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g----v~~---~~l~ell~~aDvV~l~~P~t~~t~ 167 (333)
-+.+||+|+|.|.+|+.+|+.|+. ..+|.+.|+.... +.+.+.. +.. .++.++++++|+|+.++|..-. .
T Consensus 14 g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~-~ 91 (365)
T 3abi_A 14 GRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLG-F 91 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGH-H
T ss_pred CCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCccc-c
Confidence 344589999999999999999976 5789999986422 2222211 111 1467889999999999984321 1
Q ss_pred hhccHHHHhccCCCcEEEEcc
Q psy6348 168 NLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 168 ~li~~~~~~~mk~gailIN~a 188 (333)
. + .-+.++.|.-+++++
T Consensus 92 ~-v---~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 92 K-S---IKAAIKSKVDMVDVS 108 (365)
T ss_dssp H-H---HHHHHHHTCEEEECC
T ss_pred h-H---HHHHHhcCcceEeee
Confidence 1 1 122345667777765
No 261
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=97.11 E-value=0.0056 Score=57.83 Aligned_cols=128 Identities=14% Similarity=0.065 Sum_probs=89.5
Q ss_pred hHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEec-ChHHHHHHHHHh
Q psy6348 40 AATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGL-GRIGREVALRMQ 118 (333)
Q Consensus 40 aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGl-G~IG~~vA~~l~ 118 (333)
.|...+|+|+|.-+....++- +++=++.+.++ .| .+.|+||++||= +++..+++..+.
T Consensus 118 lA~~~~vPVINa~~~~~HPtQ--aLaDl~Ti~e~------------------~g-~l~gl~va~vGD~~rva~Sl~~~~~ 176 (315)
T 1pvv_A 118 LAKYATVPVINGLSDFSHPCQ--ALADYMTIWEK------------------KG-TIKGVKVVYVGDGNNVAHSLMIAGT 176 (315)
T ss_dssp HHHHCSSCEEEEECSSCCHHH--HHHHHHHHHHH------------------HS-CCTTCEEEEESCCCHHHHHHHHHHH
T ss_pred HHHhCCCCEEcCCCCCCCcHH--HHHHHHHHHHH------------------hC-CcCCcEEEEECCCcchHHHHHHHHH
Confidence 445568999998766666654 34444443331 11 478999999997 899999999999
Q ss_pred hCCCEEEEEcCCC---CHHH---H----HhcCc--cc-cChhhhccCCCEEEEecCC-------chhh-----HhhccHH
Q psy6348 119 AFGMKVIGFDPMV---SVED---A----AKLNI--AS-LGLEDIWPLADYITVHTPL-------IPQT-----KNLINAE 173 (333)
Q Consensus 119 ~~G~~V~~~d~~~---~~~~---a----~~~gv--~~-~~l~ell~~aDvV~l~~P~-------t~~t-----~~li~~~ 173 (333)
.+|++|....|.. ..+. + ++.|. +. .+++|.++++|+|..-+=. .++- .-.++.+
T Consensus 177 ~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~e 256 (315)
T 1pvv_A 177 KLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAEERRKIFRPFQVNKD 256 (315)
T ss_dssp HTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCCCSSTTSSSSHHHHHHGGGCBCHH
T ss_pred HCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcceeccCcccchHHHHHHHHhcCCCHH
Confidence 9999999998854 2211 1 24563 32 3799999999999984321 1111 2345888
Q ss_pred HHhccCCCcEEEEcc
Q psy6348 174 VLKKCKKGVRVVNVA 188 (333)
Q Consensus 174 ~~~~mk~gailIN~a 188 (333)
.++.+|++++|..|.
T Consensus 257 ll~~a~~~ai~mH~l 271 (315)
T 1pvv_A 257 LVKHAKPDYMFMHCL 271 (315)
T ss_dssp HHHTSCTTCEEEECS
T ss_pred HHhhcCCCcEEECCC
Confidence 899999999999984
No 262
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.11 E-value=0.0022 Score=56.57 Aligned_cols=70 Identities=10% Similarity=0.129 Sum_probs=51.6
Q ss_pred cccCCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhcCc-ccc------ChhhhccCCCEEEEecCCc
Q psy6348 94 TELYGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKLNI-ASL------GLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 94 ~~l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~gv-~~~------~l~ell~~aDvV~l~~P~t 163 (333)
..+.||++.|.|. |.||+.+++.|.+.|++|++.++.... +.....++ +.+ ++.+.+.++|+|+.+....
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCC
Confidence 5689999999998 999999999999999999999987633 23333355 332 3567788999999887643
No 263
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.10 E-value=0.00098 Score=63.18 Aligned_cols=66 Identities=20% Similarity=0.221 Sum_probs=48.5
Q ss_pred CEEEEEecChHHH-HHHHHHhhC-CCEEE-EEcCCCCHHHHHh---cCccc-cChhhhccC--CCEEEEecCCch
Q psy6348 99 KTLAVLGLGRIGR-EVALRMQAF-GMKVI-GFDPMVSVEDAAK---LNIAS-LGLEDIWPL--ADYITVHTPLIP 164 (333)
Q Consensus 99 ktvGIIGlG~IG~-~vA~~l~~~-G~~V~-~~d~~~~~~~a~~---~gv~~-~~l~ell~~--aDvV~l~~P~t~ 164 (333)
.++||||+|.||+ ..+..++.. +++|. ++|+....+.+++ .++.. .++++++.+ .|+|++++|...
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 77 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHT 77 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGG
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCCHHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHH
Confidence 3899999999999 567767665 77876 5787744444444 35544 489999986 899999999543
No 264
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=97.09 E-value=0.0021 Score=63.63 Aligned_cols=94 Identities=19% Similarity=0.148 Sum_probs=68.0
Q ss_pred ccCCCEEEEEecCh----------HHHHHHHHHhhCCCEEEEEcCCCCHHHHHh-c-------------Ccccc-Chhhh
Q psy6348 95 ELYGKTLAVLGLGR----------IGREVALRMQAFGMKVIGFDPMVSVEDAAK-L-------------NIASL-GLEDI 149 (333)
Q Consensus 95 ~l~gktvGIIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~-~-------------gv~~~-~l~el 149 (333)
.+.|++|+|+|+-- -...+++.|...|.+|.+|||....+.... . ++.+. +..+.
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEA 405 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSHHHH
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccCceeecCCHHHH
Confidence 47899999999864 677899999999999999999875543311 1 23443 67888
Q ss_pred ccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCC
Q psy6348 150 WPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 150 l~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg 190 (333)
++++|.|++++.- ++-+.+=-......|+...+++|. |+
T Consensus 406 ~~~ad~~vi~t~~-~~f~~~~~~~~~~~~~~~~~i~D~-r~ 444 (467)
T 2q3e_A 406 CDGAHAVVICTEW-DMFKELDYERIHKKMLKPAFIFDG-RR 444 (467)
T ss_dssp HTTCSEEEECSCC-GGGGGSCHHHHHHHSCSSCEEEES-SC
T ss_pred HhCCcEEEEecCC-hhhhcCCHHHHHHhcCCCCEEEeC-CC
Confidence 9999999999873 444443223444667776668876 54
No 265
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=97.07 E-value=0.0052 Score=58.29 Aligned_cols=128 Identities=16% Similarity=0.193 Sum_probs=88.2
Q ss_pred hHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEecC--hHHHHHHHHH
Q psy6348 40 AATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLG--RIGREVALRM 117 (333)
Q Consensus 40 aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~l 117 (333)
.|.-.+|+|+|.-+....++- +++=++.+.++ .| .+.|+||++||=| ++..+++..+
T Consensus 130 lA~~~~vPVINa~~~~~HPtQ--aLaDl~Ti~e~------------------~g-~l~gl~va~vGD~~~rva~Sl~~~~ 188 (325)
T 1vlv_A 130 LAEYSGVPVYNGLTDEFHPTQ--ALADLMTIEEN------------------FG-RLKGVKVVFMGDTRNNVATSLMIAC 188 (325)
T ss_dssp HHHHHCSCEEESCCSSCCHHH--HHHHHHHHHHH------------------HS-CSTTCEEEEESCTTSHHHHHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCCcHH--HHHHHHHHHHH------------------hC-CcCCcEEEEECCCCcCcHHHHHHHH
Confidence 344567999998766555654 33334433331 12 4789999999986 9999999999
Q ss_pred hhCCCEEEEEcCCC---CHHH---H----HhcCcc--c-cChhhhccCCCEEEEecCC-------chh-----hHhhccH
Q psy6348 118 QAFGMKVIGFDPMV---SVED---A----AKLNIA--S-LGLEDIWPLADYITVHTPL-------IPQ-----TKNLINA 172 (333)
Q Consensus 118 ~~~G~~V~~~d~~~---~~~~---a----~~~gv~--~-~~l~ell~~aDvV~l~~P~-------t~~-----t~~li~~ 172 (333)
..+|++|....|.. ..+. + ++.|.. . .+++|+++++|+|..-+=. .++ ..-.++.
T Consensus 189 ~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~~w~smg~~~~~~~~~~~~~~y~v~~ 268 (325)
T 1vlv_A 189 AKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWASMGEEDKEKERMALLKPYQVNE 268 (325)
T ss_dssp HHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECCCC----------CHHHHGGGCBCH
T ss_pred HHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEeccccccccccchHhHHHHHhhcCCCH
Confidence 99999999998753 2211 2 255633 3 3799999999999884321 011 1234578
Q ss_pred HHHhcc-CCCcEEEEcc
Q psy6348 173 EVLKKC-KKGVRVVNVA 188 (333)
Q Consensus 173 ~~~~~m-k~gailIN~a 188 (333)
+.++.+ |++++|..|.
T Consensus 269 ell~~a~k~dai~mH~L 285 (325)
T 1vlv_A 269 RVMEMTGKSETIFMHCL 285 (325)
T ss_dssp HHHHTTCCTTCEEEECS
T ss_pred HHHHhccCCCeEEECCC
Confidence 888989 9999999984
No 266
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.06 E-value=0.0008 Score=63.49 Aligned_cols=66 Identities=17% Similarity=0.251 Sum_probs=48.6
Q ss_pred CEEEEEecChHHHH-HHHHHhhC-CCEEEE-EcCCCC--HHHHHhcCcc--ccChhhhcc--CCCEEEEecCCch
Q psy6348 99 KTLAVLGLGRIGRE-VALRMQAF-GMKVIG-FDPMVS--VEDAAKLNIA--SLGLEDIWP--LADYITVHTPLIP 164 (333)
Q Consensus 99 ktvGIIGlG~IG~~-vA~~l~~~-G~~V~~-~d~~~~--~~~a~~~gv~--~~~l~ell~--~aDvV~l~~P~t~ 164 (333)
.++||||+|.||+. ++..++.. +.+|.+ +|+... .+.++++|+. +.+++++++ +.|+|++++|...
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~ 98 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQ 98 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGG
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCch
Confidence 38999999999986 46666654 678774 688652 2345667874 348999985 5899999999543
No 267
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=97.05 E-value=0.00089 Score=66.29 Aligned_cols=112 Identities=15% Similarity=0.139 Sum_probs=70.8
Q ss_pred CCCEEEEEecChH--HHHHHHHHhh----CCCEEEEEcCCCCH-HHHHhc---------Cccc-cChhhhccCCCEEEEe
Q psy6348 97 YGKTLAVLGLGRI--GREVALRMQA----FGMKVIGFDPMVSV-EDAAKL---------NIAS-LGLEDIWPLADYITVH 159 (333)
Q Consensus 97 ~gktvGIIGlG~I--G~~vA~~l~~----~G~~V~~~d~~~~~-~~a~~~---------gv~~-~~l~ell~~aDvV~l~ 159 (333)
..+||+|||.|.+ |..++..+.. .| +|..||..... +..... .+.. .++++++++||+|+++
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~a 82 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIIS 82 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEec
Confidence 4569999999996 6788877654 47 99999986421 111111 1222 2788999999999999
Q ss_pred cCCc-----------hhhHhhcc---------------------H---HHHhccCCCcEEEEccCCcccchHhHHhhhhc
Q psy6348 160 TPLI-----------PQTKNLIN---------------------A---EVLKKCKKGVRVVNVARGGIVDENALLDSLKC 204 (333)
Q Consensus 160 ~P~t-----------~~t~~li~---------------------~---~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~ 204 (333)
++.- +.-.|+.. . +.+....|++++||++..--+-..++.+.+..
T Consensus 83 irvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~~k~~p~ 162 (450)
T 3fef_A 83 ILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKVFPG 162 (450)
T ss_dssp CCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHCTT
T ss_pred cccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHHCCC
Confidence 9632 22222211 1 23334468999999988765555555554433
Q ss_pred CCceE
Q psy6348 205 GHCGG 209 (333)
Q Consensus 205 g~i~g 209 (333)
.++.|
T Consensus 163 ~rviG 167 (450)
T 3fef_A 163 IKAIG 167 (450)
T ss_dssp CEEEE
T ss_pred CCEEE
Confidence 44443
No 268
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.04 E-value=0.00068 Score=64.51 Aligned_cols=93 Identities=13% Similarity=0.053 Sum_probs=60.5
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC--EEEEEcCCCCHHHHH--hc--C--------ccc-cChhhhccCCCEEEEecC
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM--KVIGFDPMVSVEDAA--KL--N--------IAS-LGLEDIWPLADYITVHTP 161 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~a~--~~--g--------v~~-~~l~ell~~aDvV~l~~P 161 (333)
..++|+|||.|.||..+|..+...|+ +|..||......... ++ + +.. .+.++ +++||+|+++..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 56899999999999999999988787 999999854221111 00 1 111 15555 899999999864
Q ss_pred Cch-----------hhHhhcc--HHHHhccCCCcEEEEccCC
Q psy6348 162 LIP-----------QTKNLIN--AEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 162 ~t~-----------~t~~li~--~~~~~~mk~gailIN~aRg 190 (333)
... .+..++. .+.+....|++++++++-.
T Consensus 99 ~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNP 140 (330)
T 3ldh_A 99 ARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPEL 140 (330)
T ss_dssp CCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCc
Confidence 321 1112221 1233345789999999753
No 269
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=97.04 E-value=0.0011 Score=62.93 Aligned_cols=112 Identities=13% Similarity=0.024 Sum_probs=67.3
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCC--EEEEEcCCCCHHH--HHhc--C------ccc-cChhhhccCCCEEEEecCCch
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGM--KVIGFDPMVSVED--AAKL--N------IAS-LGLEDIWPLADYITVHTPLIP 164 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a~~~--g------v~~-~~l~ell~~aDvV~l~~P~t~ 164 (333)
..||+|||.|.+|..++..+...++ ++..||....... +.++ . +.. .+..+.+++||+|+++.+...
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~~ 88 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAPQ 88 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 3699999999999999998877665 8999998542111 1111 1 111 145677999999999986432
Q ss_pred hhHhh------------cc--HHHHhccCCCcEEEEccCCcccchHhHHhh--hhcCCceEE
Q psy6348 165 QTKNL------------IN--AEVLKKCKKGVRVVNVARGGIVDENALLDS--LKCGHCGGA 210 (333)
Q Consensus 165 ~t~~l------------i~--~~~~~~mk~gailIN~aRg~~vd~~aL~~a--L~~g~i~ga 210 (333)
..++ +. .+.+....|++++|+++-.--+....+.+. +...++.|.
T Consensus 89 -k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~ 149 (326)
T 2zqz_A 89 -KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLSGFPKNRVVGS 149 (326)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEEc
Confidence 1211 10 112233368999999844333333334343 344466666
No 270
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.02 E-value=0.00073 Score=63.91 Aligned_cols=67 Identities=16% Similarity=0.130 Sum_probs=46.6
Q ss_pred CEEEEEecChHHHHH-HH-HHh-hCCCEEE-EEcCCCCHH-HHHhc-Cccc-cChhhhccC--CCEEEEecCCchh
Q psy6348 99 KTLAVLGLGRIGREV-AL-RMQ-AFGMKVI-GFDPMVSVE-DAAKL-NIAS-LGLEDIWPL--ADYITVHTPLIPQ 165 (333)
Q Consensus 99 ktvGIIGlG~IG~~v-A~-~l~-~~G~~V~-~~d~~~~~~-~a~~~-gv~~-~~l~ell~~--aDvV~l~~P~t~~ 165 (333)
.++||||+|.||+.+ +. .+. .-++++. ++|+..... ...+. ++.. .++++++.+ .|+|++++|....
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 78 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSH 78 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGGH
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHHH
Confidence 379999999999974 44 323 3478877 678876432 22222 4543 489999986 8999999995443
No 271
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.02 E-value=0.00055 Score=65.30 Aligned_cols=64 Identities=11% Similarity=0.199 Sum_probs=46.6
Q ss_pred CEEEEEecChHHHH-HHHHHhhC-CCEEE-EEcCCCCH--HHHHhcC-cc-ccChhhhccC--CCEEEEecCC
Q psy6348 99 KTLAVLGLGRIGRE-VALRMQAF-GMKVI-GFDPMVSV--EDAAKLN-IA-SLGLEDIWPL--ADYITVHTPL 162 (333)
Q Consensus 99 ktvGIIGlG~IG~~-vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~g-v~-~~~l~ell~~--aDvV~l~~P~ 162 (333)
.++||||+|.||+. +++.++.. +.++. ++|+.... +.+++.+ .. +.++++++++ .|+|++++|.
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 78 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPP 78 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCH
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCc
Confidence 58999999999996 88888776 77876 67886522 1222332 33 3489999974 5999999994
No 272
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=97.02 E-value=0.0013 Score=62.33 Aligned_cols=94 Identities=16% Similarity=0.129 Sum_probs=59.8
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC--EEEEEcCCCCHHHHH--hc--------Cccc-cChhhhccCCCEEEEecCCc
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM--KVIGFDPMVSVEDAA--KL--------NIAS-LGLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~a~--~~--------gv~~-~~l~ell~~aDvV~l~~P~t 163 (333)
.+++|+|||.|.||+.+|..+...|+ ++..||......... ++ .+.. .+..+.+++||+|+++....
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~~ 87 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGAP 87 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCCC
Confidence 56799999999999999999987777 999999854221111 11 1111 13467899999999987532
Q ss_pred --h-hhH-hhc--c----H---HHHhccCCCcEEEEccCC
Q psy6348 164 --P-QTK-NLI--N----A---EVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 164 --~-~t~-~li--~----~---~~~~~mk~gailIN~aRg 190 (333)
+ .++ .++ + + +.+....|++++++++-.
T Consensus 88 ~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNP 127 (326)
T 3vku_A 88 QKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 127 (326)
T ss_dssp ----------------CHHHHHHHHHTTTCCSEEEECSSS
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCc
Confidence 1 111 112 1 1 233445689999999743
No 273
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=97.02 E-value=0.002 Score=60.86 Aligned_cols=88 Identities=19% Similarity=0.177 Sum_probs=67.6
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc--ChhhhccCCCEEEEecCCchhhHhhccHH
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL--GLEDIWPLADYITVHTPLIPQTKNLINAE 173 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~--~l~ell~~aDvV~l~~P~t~~t~~li~~~ 173 (333)
.|++|.|+|.|.+|...++.++.+|.+|++.++.. ..+.++++|...+ +.+++.+..|+|+-++.... .-..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~-----~~~~ 250 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHY-----DLKD 250 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCC-----CHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHH-----HHHH
Confidence 58899999999999999999999999999999776 5567788886532 33444447899998876432 1245
Q ss_pred HHhccCCCcEEEEccC
Q psy6348 174 VLKKCKKGVRVVNVAR 189 (333)
Q Consensus 174 ~~~~mk~gailIN~aR 189 (333)
.+..++++..++.++.
T Consensus 251 ~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 251 YLKLLTYNGDLALVGL 266 (348)
T ss_dssp HHTTEEEEEEEEECCC
T ss_pred HHHHHhcCCEEEEECC
Confidence 6677888888888854
No 274
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=96.99 E-value=0.00068 Score=64.29 Aligned_cols=66 Identities=18% Similarity=0.171 Sum_probs=47.6
Q ss_pred CEEEEEecChHHHH-HHHHHhhC-CCEEE-EEcCCCCHHHHHhc-Cccc-cChhhhccC--CCEEEEecCCchh
Q psy6348 99 KTLAVLGLGRIGRE-VALRMQAF-GMKVI-GFDPMVSVEDAAKL-NIAS-LGLEDIWPL--ADYITVHTPLIPQ 165 (333)
Q Consensus 99 ktvGIIGlG~IG~~-vA~~l~~~-G~~V~-~~d~~~~~~~a~~~-gv~~-~~l~ell~~--aDvV~l~~P~t~~ 165 (333)
.++||||+|.||+. .+..++.. +++|. ++|+...... +.. ++.. .++++++.. .|+|++++|....
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~-~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 80 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH-ADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTH 80 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH-TTCSSCCEESCHHHHHHCSSCCEEEECSCTTTH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH-hhCCCCceECCHHHHhcCCCCCEEEEeCChHHH
Confidence 48999999999997 77777765 77876 5787542222 222 3433 489999975 9999999996543
No 275
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=96.99 E-value=0.0042 Score=59.76 Aligned_cols=128 Identities=16% Similarity=0.089 Sum_probs=86.1
Q ss_pred hHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEecC--hHHHHHHHHH
Q psy6348 40 AATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLG--RIGREVALRM 117 (333)
Q Consensus 40 aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~l 117 (333)
.|.-.+|+|.|.-+...-++- +++=++.+.++ .| .+.|+||++||=| ++..+++..+
T Consensus 143 lA~~s~vPVINa~~~~~HPtQ--aLaDl~Ti~E~------------------~G-~l~glkva~vGD~~nnva~Sl~~~~ 201 (365)
T 4amu_A 143 LVKYSGVPVWNGLTDDEHPTQ--IIADFMTMKEK------------------FG-NLKNKKIVFIGDYKNNVGVSTMIGA 201 (365)
T ss_dssp HHHHHCSCEEEEECSSCCHHH--HHHHHHHHHHH------------------HS-SCTTCEEEEESSTTSHHHHHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCCcHH--HHHHHHHHHHH------------------hC-CCCCCEEEEECCCCcchHHHHHHHH
Confidence 345568999998665555543 33333333221 12 2789999999988 7889999999
Q ss_pred hhCCCEEEEEcCCC--C---HHH-------HHhcCcc--c-cChhhhccCCCEEEEec--CCch--h---h------Hhh
Q psy6348 118 QAFGMKVIGFDPMV--S---VED-------AAKLNIA--S-LGLEDIWPLADYITVHT--PLIP--Q---T------KNL 169 (333)
Q Consensus 118 ~~~G~~V~~~d~~~--~---~~~-------a~~~gv~--~-~~l~ell~~aDvV~l~~--P~t~--~---t------~~l 169 (333)
..+|++|....|.. . .+. +++.|.. . .+++|++++||+|..-+ ...+ + . .-.
T Consensus 202 ~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVytd~W~smg~~~~~~~er~~~~~~y~ 281 (365)
T 4amu_A 202 AFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIYTDVWVSLGEPFELFDKRIGELKNFQ 281 (365)
T ss_dssp HHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEEECCSCCTTCCHHHHHHHHHHHTTCC
T ss_pred HHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEEecccccCCchhhhHHHHHHHhcccc
Confidence 99999999998743 1 111 2344533 3 38999999999998732 1111 1 0 123
Q ss_pred ccHHHHhccCCCcEEEEcc
Q psy6348 170 INAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 170 i~~~~~~~mk~gailIN~a 188 (333)
++.+.++.+|++++|..|.
T Consensus 282 vt~ell~~a~~dai~MHcL 300 (365)
T 4amu_A 282 VDMNMIKAAKNDVIFLHCL 300 (365)
T ss_dssp BCHHHHHHSCTTCEEEECS
T ss_pred cCHHHHHhcCCCcEEECCC
Confidence 6888888899999999984
No 276
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.97 E-value=0.006 Score=57.46 Aligned_cols=128 Identities=14% Similarity=0.079 Sum_probs=85.5
Q ss_pred hHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEec-ChHHHHHHHHHh
Q psy6348 40 AATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGL-GRIGREVALRMQ 118 (333)
Q Consensus 40 aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGl-G~IG~~vA~~l~ 118 (333)
.|...+|+|+|.-+....++- +++=++.+.++ .| .+.|+||++||= +++..+++..+.
T Consensus 117 lA~~~~vPVINag~~~~HPtQ--aLaDl~Ti~e~------------------~g-~l~glkva~vGD~~~va~Sl~~~~~ 175 (309)
T 4f2g_A 117 FAENSRVPVINGLTNEYHPCQ--VLADIFTYYEH------------------RG-PIRGKTVAWVGDANNMLYTWIQAAR 175 (309)
T ss_dssp HHHTCSSCEEEEECSSCCHHH--HHHHHHHHHHH------------------HS-CCTTCEEEEESCCCHHHHHHHHHHH
T ss_pred HHHhCCCCEEECCCCccCcHH--HHHHHHHHHHH------------------hC-CCCCCEEEEECCCcchHHHHHHHHH
Confidence 455678999999765555553 33333333221 12 378999999996 678888899999
Q ss_pred hCCCEEEEEcCCC---CHHH-HHhcCc--cc-cChhhhccCCCEEEEec----CC---ch-----hhHhhccHHHHhccC
Q psy6348 119 AFGMKVIGFDPMV---SVED-AAKLNI--AS-LGLEDIWPLADYITVHT----PL---IP-----QTKNLINAEVLKKCK 179 (333)
Q Consensus 119 ~~G~~V~~~d~~~---~~~~-a~~~gv--~~-~~l~ell~~aDvV~l~~----P~---t~-----~t~~li~~~~~~~mk 179 (333)
.+|++|....|.. +.+. +++.|. +. .+++|.++++|+|..-+ .. .+ -..-.++.+.++.+|
T Consensus 176 ~~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~a~ 255 (309)
T 4f2g_A 176 ILDFKLQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGFEAENEARKRAFADWCVDEEMMSHAN 255 (309)
T ss_dssp HHTCEEEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC------------CCSGGGGCBCHHHHTTSC
T ss_pred HcCCEEEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcchhhHHHHHHHhcCceeCHHHHHhcC
Confidence 9999999988743 2221 123333 22 38999999999998754 10 00 012346888889899
Q ss_pred CCcEEEEcc
Q psy6348 180 KGVRVVNVA 188 (333)
Q Consensus 180 ~gailIN~a 188 (333)
++++|..|.
T Consensus 256 ~~ai~mH~l 264 (309)
T 4f2g_A 256 SDALFMHCL 264 (309)
T ss_dssp TTCEEEECS
T ss_pred CCeEEECCC
Confidence 999999984
No 277
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.95 E-value=0.0052 Score=58.21 Aligned_cols=116 Identities=19% Similarity=0.153 Sum_probs=69.3
Q ss_pred cCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCCHHH--H---Hh------cCccc--cChhhhccCCCEEEEecC
Q psy6348 96 LYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVSVED--A---AK------LNIAS--LGLEDIWPLADYITVHTP 161 (333)
Q Consensus 96 l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~--a---~~------~gv~~--~~l~ell~~aDvV~l~~P 161 (333)
+..++|+|||.|.||..+|..+...|+ +|..||....... + .+ ..... .+-.+.+++||+|+++.+
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~~a~~~aDiVIiaag 84 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDYAAIEGADVVIVTAG 84 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSGGGGTTCSEEEECCS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCHHHHCCCCEEEEccC
Confidence 356799999999999999999988888 9999998764321 1 11 11221 122378999999999975
Q ss_pred Cc--h-hhH--------hhcc--HHHHhccCCCcEEEEccCCcccchHhHHhh--hhcCCceEEE
Q psy6348 162 LI--P-QTK--------NLIN--AEVLKKCKKGVRVVNVARGGIVDENALLDS--LKCGHCGGAA 211 (333)
Q Consensus 162 ~t--~-~t~--------~li~--~~~~~~mk~gailIN~aRg~~vd~~aL~~a--L~~g~i~gaa 211 (333)
.. + .++ .++. .+.+....|++++++++-.--+....+.+. +...++.|.+
T Consensus 85 ~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPvd~~t~~~~k~sg~p~~rviG~~ 149 (324)
T 3gvi_A 85 VPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPLDAMVWALQKFSGLPAHKVVGMA 149 (324)
T ss_dssp CCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEECC
T ss_pred cCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCcHHHHHHHHHhcCCCHHHEEeec
Confidence 22 1 111 1111 012233458999999985433333333332 2223555555
No 278
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.94 E-value=0.0026 Score=62.81 Aligned_cols=67 Identities=18% Similarity=0.143 Sum_probs=49.0
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHH--HhcC-cc-----cc---ChhhhccCCCEEEEecCCc
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDA--AKLN-IA-----SL---GLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a--~~~g-v~-----~~---~l~ell~~aDvV~l~~P~t 163 (333)
.+++++|+|.|.||+.+++.|...|.+|.++|+....... ...+ +. .. +++++++++|+|+.++|..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 4789999999999999999999999999999986422111 1111 21 11 3457788999999999854
No 279
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.93 E-value=0.0037 Score=59.00 Aligned_cols=115 Identities=15% Similarity=0.152 Sum_probs=69.3
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC--CHHHHHhc-----------C--ccccChhhhccCCCEEEEec
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV--SVEDAAKL-----------N--IASLGLEDIWPLADYITVHT 160 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~--~~~~a~~~-----------g--v~~~~l~ell~~aDvV~l~~ 160 (333)
..++|+|||.|.||..+|..+...|+ +|..||... ........ . +...+-.+.+++||+|+++.
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVITA 86 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEeC
Confidence 46799999999999999999998899 999999973 11111110 1 11122357789999999997
Q ss_pred CC--ch-hhH-hhc--c----H---HHHhccCCCcEEEEccCCcccchHhHHhh--hhcCCceEEE
Q psy6348 161 PL--IP-QTK-NLI--N----A---EVLKKCKKGVRVVNVARGGIVDENALLDS--LKCGHCGGAA 211 (333)
Q Consensus 161 P~--t~-~t~-~li--~----~---~~~~~mk~gailIN~aRg~~vd~~aL~~a--L~~g~i~gaa 211 (333)
.. .+ .++ .++ + + +.+....|++++++++-.-=+....+.+. +...++.|.+
T Consensus 87 g~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPvd~~t~~~~k~sg~p~~rviG~g 152 (315)
T 3tl2_A 87 GIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPVDAMTYSVFKEAGFPKERVIGQS 152 (315)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEECC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChHHHHHHHHHHhcCCChHHEEeec
Confidence 42 21 111 111 1 1 12333468899999985433333333332 2234566653
No 280
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.93 E-value=0.0023 Score=60.27 Aligned_cols=108 Identities=18% Similarity=0.140 Sum_probs=70.4
Q ss_pred CCEEEEEecChHHHH-HHHHHhhCCCEEEEEcCCCCH---HHHHhcCcccc---Chhhhc-cCCCEEEEe--cC-Cchhh
Q psy6348 98 GKTLAVLGLGRIGRE-VALRMQAFGMKVIGFDPMVSV---EDAAKLNIASL---GLEDIW-PLADYITVH--TP-LIPQT 166 (333)
Q Consensus 98 gktvGIIGlG~IG~~-vA~~l~~~G~~V~~~d~~~~~---~~a~~~gv~~~---~l~ell-~~aDvV~l~--~P-~t~~t 166 (333)
.|++.|||.|.+|.+ +|+.|+..|++|.++|..... +..++.|+... +.+++. .++|+|+.. +| .+|..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHHH
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHHH
Confidence 579999999999996 999999999999999986532 34556687653 445555 579999986 33 33332
Q ss_pred Hh-------hccHH-HHhc--cCCC-cEEEEccCCcccchHhHHhhhhcC
Q psy6348 167 KN-------LINAE-VLKK--CKKG-VRVVNVARGGIVDENALLDSLKCG 205 (333)
Q Consensus 167 ~~-------li~~~-~~~~--mk~g-ailIN~aRg~~vd~~aL~~aL~~g 205 (333)
.. ++++- .+.. +++. .+-|--+.|+--...-+...|+..
T Consensus 84 ~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~ 133 (326)
T 3eag_A 84 EAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYA 133 (326)
T ss_dssp HHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHc
Confidence 21 33333 3333 3332 344444567766666666777653
No 281
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.92 E-value=0.0027 Score=59.31 Aligned_cols=113 Identities=19% Similarity=0.182 Sum_probs=70.1
Q ss_pred CEEEEEecChHHHHHHHHHhhCCC--EEEEEcCCCCHHH--HH---h----c--C--ccccChhhhccCCCEEEEecCCc
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGM--KVIGFDPMVSVED--AA---K----L--N--IASLGLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a~---~----~--g--v~~~~l~ell~~aDvV~l~~P~t 163 (333)
++|+|||.|.||..+|..|...|. +|..||+...... +. + + . +...+-.+.+++||+|+++.+..
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~~~aDiVViaag~~ 80 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLA 80 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCCHHHhCCCCEEEECCCCC
Confidence 489999999999999999988787 9999998652211 11 1 1 1 11122278899999999997532
Q ss_pred --h-hhH--------hhcc--HHHHhccCCCcEEEEccCCcccchHhH--Hhh--hhcCCceEEE--ec
Q psy6348 164 --P-QTK--------NLIN--AEVLKKCKKGVRVVNVARGGIVDENAL--LDS--LKCGHCGGAA--LD 213 (333)
Q Consensus 164 --~-~t~--------~li~--~~~~~~mk~gailIN~aRg~~vd~~aL--~~a--L~~g~i~gaa--lD 213 (333)
+ .++ .++. .+.+....|++++++++ .++|.-.. .+. +...++.|.+ ||
T Consensus 81 ~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs--NPvd~~t~~~~k~~g~p~~rviG~gt~LD 147 (294)
T 1oju_A 81 RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVMTYIMWKESGKPRNEVFGMGNQLD 147 (294)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHHHHHHHHHSCCCTTSEEECSHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC--CcchHHHHHHHHhcCCCHHHEeecccccH
Confidence 1 111 1111 12344457899999998 44554332 221 1235677764 56
No 282
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.92 E-value=0.0021 Score=64.16 Aligned_cols=98 Identities=18% Similarity=0.146 Sum_probs=69.8
Q ss_pred cccCCCEEEEEecCh----------HHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccc-cChhhhccCCCEEEEecCC
Q psy6348 94 TELYGKTLAVLGLGR----------IGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIAS-LGLEDIWPLADYITVHTPL 162 (333)
Q Consensus 94 ~~l~gktvGIIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~-~~l~ell~~aDvV~l~~P~ 162 (333)
..+.|++|+|+|+-- =...+++.|...|.+|.+|||.... . .++.+ .++++.+++||.|+++++
T Consensus 349 ~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~--~--~~~~~~~~~~~~~~~ad~vvi~t~- 423 (478)
T 3g79_A 349 KKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVN--Y--PGVEISDNLEEVVRNADAIVVLAG- 423 (478)
T ss_dssp CCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCC--B--TTBCEESCHHHHHTTCSEEEECSC-
T ss_pred cCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCccc--c--cCcceecCHHHHHhcCCEEEEecC-
Confidence 467899999999842 3578899999999999999998752 1 12333 378999999999999987
Q ss_pred chhhHhhccHHHHhccC-CCcEEEEccCCcccchHhH
Q psy6348 163 IPQTKNLINAEVLKKCK-KGVRVVNVARGGIVDENAL 198 (333)
Q Consensus 163 t~~t~~li~~~~~~~mk-~gailIN~aRg~~vd~~aL 198 (333)
.++-+.+=-....+.|+ +..+++|. |+- .|.+.+
T Consensus 424 ~~~f~~~d~~~~~~~~~~~~~~i~D~-rn~-~~~~~~ 458 (478)
T 3g79_A 424 HSAYSSLKADWAKKVSAKANPVIIDG-RNV-IEPDEF 458 (478)
T ss_dssp CHHHHSCCHHHHHHHHCCSSCEEEES-SSC-SCHHHH
T ss_pred CHHHHhhhHHHHHHHhccCCCEEEEC-CCC-CCHHHH
Confidence 44444433344556677 47899995 553 444443
No 283
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=96.90 E-value=0.0021 Score=63.98 Aligned_cols=66 Identities=17% Similarity=0.279 Sum_probs=50.6
Q ss_pred CCEEEEEec----ChHHHHHHHHHhhC--CCEEE-EEcCCCCH--HHHHhcCcc----ccChhhhcc--CCCEEEEecCC
Q psy6348 98 GKTLAVLGL----GRIGREVALRMQAF--GMKVI-GFDPMVSV--EDAAKLNIA----SLGLEDIWP--LADYITVHTPL 162 (333)
Q Consensus 98 gktvGIIGl----G~IG~~vA~~l~~~--G~~V~-~~d~~~~~--~~a~~~gv~----~~~l~ell~--~aDvV~l~~P~ 162 (333)
-.+|||||+ |.||+..++.++.. +++|+ ++|+.... +.+++.|+. +.+++++++ +.|+|++++|.
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp~ 118 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVKV 118 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSCH
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCCc
Confidence 358999999 99999999999876 77865 67886522 234556764 348999985 69999999994
Q ss_pred c
Q psy6348 163 I 163 (333)
Q Consensus 163 t 163 (333)
.
T Consensus 119 ~ 119 (479)
T 2nvw_A 119 P 119 (479)
T ss_dssp H
T ss_pred H
Confidence 3
No 284
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.90 E-value=0.00054 Score=61.33 Aligned_cols=64 Identities=16% Similarity=0.127 Sum_probs=41.3
Q ss_pred CEEEEEecChHHHHHHHH--HhhCCCEEEE-EcCCCCHHHHHhcCcc---ccChhhhccCCCEEEEecCC
Q psy6348 99 KTLAVLGLGRIGREVALR--MQAFGMKVIG-FDPMVSVEDAAKLNIA---SLGLEDIWPLADYITVHTPL 162 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~--l~~~G~~V~~-~d~~~~~~~a~~~gv~---~~~l~ell~~aDvV~l~~P~ 162 (333)
++++|||.|++|+.+++. ....|+++.+ +|..+......-.|+. ..++++++++.|++++++|.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs 155 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPA 155 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCc
Confidence 579999999999999993 4566888775 5765432211112332 23688888777999999994
No 285
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.87 E-value=0.0053 Score=60.46 Aligned_cols=113 Identities=19% Similarity=0.258 Sum_probs=72.8
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCCEEEE-Ec-------CCC-CHHHHH----hcC-------ccccChhhhcc-
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGMKVIG-FD-------PMV-SVEDAA----KLN-------IASLGLEDIWP- 151 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~-~d-------~~~-~~~~a~----~~g-------v~~~~l~ell~- 151 (333)
|.++.|+++.|.|+|++|+.+|+.|...|.+|++ .| |.- ..+... +.| .+..+.++++.
T Consensus 230 g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~~ 309 (440)
T 3aog_A 230 GLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWGL 309 (440)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTTC
T ss_pred CCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhcC
Confidence 4578999999999999999999999999999984 33 321 222221 122 13334556553
Q ss_pred CCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEecc
Q psy6348 152 LADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDV 214 (333)
Q Consensus 152 ~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV 214 (333)
+||+++-|.. .+.++.+....++ -.+++-.+-+.+ ..+ -.+.|.+..+. ++=|.
T Consensus 310 ~~DIlvPcA~-----~n~i~~~na~~l~-ak~VvEgAN~p~-t~e-A~~iL~~~GI~-~~PD~ 363 (440)
T 3aog_A 310 PVEFLVPAAL-----EKQITEQNAWRIR-ARIVAEGANGPT-TPA-ADDILLEKGVL-VVPDV 363 (440)
T ss_dssp CCSEEEECSS-----SSCBCTTTGGGCC-CSEEECCSSSCB-CHH-HHHHHHHHTCE-EECHH
T ss_pred CCcEEEecCC-----cCccchhhHHHcC-CcEEEecCcccc-CHH-HHHHHHHCCCE-EEChH
Confidence 6999998864 4567777767773 456666666665 333 33555555554 44443
No 286
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=96.87 E-value=0.0016 Score=61.94 Aligned_cols=66 Identities=15% Similarity=0.162 Sum_probs=48.5
Q ss_pred CEEEEEecChHHHH-HHHHHhhC-CCEEE-EEcCCCCHHHHHhc-Cccc-cChhhhcc--CCCEEEEecCCchh
Q psy6348 99 KTLAVLGLGRIGRE-VALRMQAF-GMKVI-GFDPMVSVEDAAKL-NIAS-LGLEDIWP--LADYITVHTPLIPQ 165 (333)
Q Consensus 99 ktvGIIGlG~IG~~-vA~~l~~~-G~~V~-~~d~~~~~~~a~~~-gv~~-~~l~ell~--~aDvV~l~~P~t~~ 165 (333)
.++||||+|.||+. .+..++.. +++|. ++|+.... .+++. ++.. .++++++. +.|+|++++|....
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~-~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 78 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEE-VKRDFPDAEVVHELEEITNDPAIELVIVTTPSGLH 78 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHH-HHHHCTTSEEESSTHHHHTCTTCCEEEECSCTTTH
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH-HHhhCCCCceECCHHHHhcCCCCCEEEEcCCcHHH
Confidence 48999999999997 67777765 78876 46775422 33344 4443 48999998 79999999996543
No 287
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.86 E-value=0.0016 Score=61.77 Aligned_cols=67 Identities=16% Similarity=0.232 Sum_probs=48.1
Q ss_pred CCEEEEEecChHHHHHHHHHhhC--------CCEEEE-EcCCCC--HHHHHhcCcc--ccChhhhcc--CCCEEEEecCC
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAF--------GMKVIG-FDPMVS--VEDAAKLNIA--SLGLEDIWP--LADYITVHTPL 162 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~--------G~~V~~-~d~~~~--~~~a~~~gv~--~~~l~ell~--~aDvV~l~~P~ 162 (333)
--+|||||+|.||+.-++.++++ +.+|.+ +|+... .+.++++|+. +.+++++++ +.|+|++++|.
T Consensus 25 kirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP~ 104 (393)
T 4fb5_A 25 PLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTTPN 104 (393)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSCG
T ss_pred CccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCCh
Confidence 34899999999999887766543 567665 687663 2445667874 348999985 58999999995
Q ss_pred ch
Q psy6348 163 IP 164 (333)
Q Consensus 163 t~ 164 (333)
..
T Consensus 105 ~~ 106 (393)
T 4fb5_A 105 QF 106 (393)
T ss_dssp GG
T ss_pred HH
Confidence 44
No 288
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=96.85 E-value=0.0014 Score=62.47 Aligned_cols=91 Identities=15% Similarity=0.059 Sum_probs=61.4
Q ss_pred ccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCC---C-HHHHHhcCccccC---hhhhc----cCCCEEEEecCCc
Q psy6348 95 ELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMV---S-VEDAAKLNIASLG---LEDIW----PLADYITVHTPLI 163 (333)
Q Consensus 95 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~---~-~~~a~~~gv~~~~---l~ell----~~aDvV~l~~P~t 163 (333)
++.|++|.|+|.|.||..+++.++.+|.+|++.++.. . .+.++++|...++ +.+.+ ...|+|+-++...
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 257 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD 257 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCCh
Confidence 5679999999999999999999999999999999865 2 2445566654321 11111 3477777777632
Q ss_pred hhhHhhccHHHHhccCCCcEEEEccC
Q psy6348 164 PQTKNLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 164 ~~t~~li~~~~~~~mk~gailIN~aR 189 (333)
... + ...+..|+++..+|+++-
T Consensus 258 ~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 258 VNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp THH---H-HHHGGGEEEEEEEEECSC
T ss_pred HHH---H-HHHHHHHhcCCEEEEEec
Confidence 211 0 344566777777777643
No 289
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=96.85 E-value=0.0038 Score=58.76 Aligned_cols=129 Identities=22% Similarity=0.245 Sum_probs=86.4
Q ss_pred hhHhhCCcEEEECCC-CCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEec---ChHHHHHH
Q psy6348 39 TAATRKGVLVLNAPG-GNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGL---GRIGREVA 114 (333)
Q Consensus 39 ~aa~~~gI~V~n~p~-~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGl---G~IG~~vA 114 (333)
+.|...+|+|.|.-. ....++- +++=++.+.++ .| .+.|+||++||= |++..+++
T Consensus 116 ~la~~~~vPVINag~g~~~HPtQ--~LaDl~Ti~e~------------------~g-~l~gl~va~vGD~~~~rva~Sl~ 174 (308)
T 1ml4_A 116 LAAEVAEVPVINAGDGSNQHPTQ--TLLDLYTIKKE------------------FG-RIDGLKIGLLGDLKYGRTVHSLA 174 (308)
T ss_dssp HHHHTCSSCEEEEEETTSCCHHH--HHHHHHHHHHH------------------SS-CSSSEEEEEESCTTTCHHHHHHH
T ss_pred HHHHhCCCCEEeCccCCccCcHH--HHHHHHHHHHH------------------hC-CCCCeEEEEeCCCCcCchHHHHH
Confidence 344566799999854 4555554 33334433331 12 378999999998 48999999
Q ss_pred HHHhhCCCEEEEEcCCC---CH---HHHHhcCccc---cChhhhccCCCEEEEecCCc------hhhH-----hhccHHH
Q psy6348 115 LRMQAFGMKVIGFDPMV---SV---EDAAKLNIAS---LGLEDIWPLADYITVHTPLI------PQTK-----NLINAEV 174 (333)
Q Consensus 115 ~~l~~~G~~V~~~d~~~---~~---~~a~~~gv~~---~~l~ell~~aDvV~l~~P~t------~~t~-----~li~~~~ 174 (333)
..+..+|++|....|.. .. +.+++.|..+ .+++|+++++|+|..-.=-. ++.. -.++.+.
T Consensus 175 ~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~l 254 (308)
T 1ml4_A 175 EALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQKERFPDEQEYLKVKGSYQVNLKV 254 (308)
T ss_dssp HHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCCGGGSSSHHHHHTTTTCCCBCTTG
T ss_pred HHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCccccccCCHHHHHHHhcCcccCHHH
Confidence 99999999999998753 22 2233446543 37999999999998854211 1111 2346677
Q ss_pred HhccCCCcEEEEcc
Q psy6348 175 LKKCKKGVRVVNVA 188 (333)
Q Consensus 175 ~~~mk~gailIN~a 188 (333)
++.+|+++++..|.
T Consensus 255 l~~a~~~ai~mH~l 268 (308)
T 1ml4_A 255 LEKAKDELRIMHPL 268 (308)
T ss_dssp GGGSCTTCEEECCS
T ss_pred HhhcCCCCEEECCC
Confidence 77778888888873
No 290
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=96.84 E-value=0.012 Score=56.10 Aligned_cols=129 Identities=18% Similarity=0.160 Sum_probs=87.0
Q ss_pred hhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEec-ChHHHHHHHHH
Q psy6348 39 TAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGL-GRIGREVALRM 117 (333)
Q Consensus 39 ~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGl-G~IG~~vA~~l 117 (333)
+.|...+|+|+|.-+....++- +++=++.+.++ .| .+.|+||++||= +++..+++..+
T Consensus 141 ~lA~~~~vPVINag~~~~HPtQ--aLaDl~TI~E~------------------~G-~l~glkva~vGD~~nva~Sl~~~~ 199 (340)
T 4ep1_A 141 ELAKESSIPVINGLTDDHHPCQ--ALADLMTIYEE------------------TN-TFKGIKLAYVGDGNNVCHSLLLAS 199 (340)
T ss_dssp HHHHHCSSCEEEEECSSCCHHH--HHHHHHHHHHH------------------HS-CCTTCEEEEESCCCHHHHHHHHHH
T ss_pred HHHHhCCCCEEeCCCCCCCcHH--HHHHHHHHHHH------------------hC-CCCCCEEEEECCCchhHHHHHHHH
Confidence 3456678999998665555543 33333333321 12 378999999996 67888899999
Q ss_pred hhCCCEEEEEcCCC---CHHH-------HHhcCc--cc-cChhhhccCCCEEEEecCCch------hh-----HhhccHH
Q psy6348 118 QAFGMKVIGFDPMV---SVED-------AAKLNI--AS-LGLEDIWPLADYITVHTPLIP------QT-----KNLINAE 173 (333)
Q Consensus 118 ~~~G~~V~~~d~~~---~~~~-------a~~~gv--~~-~~l~ell~~aDvV~l~~P~t~------~t-----~~li~~~ 173 (333)
..+|++|....|.. +.+. +++.|. +. .+++|+++++|+|..-.=-.. +. .-.++.+
T Consensus 200 ~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~w~smg~e~~~~~~~~~~~y~vt~e 279 (340)
T 4ep1_A 200 AKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVWMSMGQEGEEEKYTLFQPYQINKE 279 (340)
T ss_dssp HHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECCC------CHHHHHHHHGGGCBCHH
T ss_pred HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecCccCCCCCchHHHHHHhccccCCHH
Confidence 99999999988753 2221 124563 32 389999999999987542110 10 1246888
Q ss_pred HHhccCCCcEEEEcc
Q psy6348 174 VLKKCKKGVRVVNVA 188 (333)
Q Consensus 174 ~~~~mk~gailIN~a 188 (333)
.++.+|++++|..|.
T Consensus 280 ll~~ak~dai~MHcL 294 (340)
T 4ep1_A 280 LVKHAKQTYHFLHCL 294 (340)
T ss_dssp HHTTSCTTCEEEECS
T ss_pred HHHhcCCCcEEECCC
Confidence 889999999999985
No 291
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=96.84 E-value=0.0076 Score=57.05 Aligned_cols=128 Identities=13% Similarity=0.104 Sum_probs=86.4
Q ss_pred hHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEecC-hHHHHHHHHHh
Q psy6348 40 AATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLG-RIGREVALRMQ 118 (333)
Q Consensus 40 aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG-~IG~~vA~~l~ 118 (333)
.|...+|+|+|.-+....++- +++=++.+.++ .| .+.|++|++||=| ++..+++..+.
T Consensus 118 lA~~~~vPVINa~~~~~HPtQ--aLaDl~Ti~e~------------------~g-~l~gl~va~vGD~~~va~Sl~~~~~ 176 (321)
T 1oth_A 118 LAKEASIPIINGLSDLYHPIQ--ILADYLTLQEH------------------YS-SLKGLTLSWIGDGNNILHSIMMSAA 176 (321)
T ss_dssp HHHHCSSCEEESCCSSCCHHH--HHHHHHHHHHH------------------HS-CCTTCEEEEESCSSHHHHHHHTTTG
T ss_pred HHHhCCCCEEcCCCCCCCcHH--HHHHHHHHHHH------------------hC-CcCCcEEEEECCchhhHHHHHHHHH
Confidence 455568999998765555654 34444443332 11 3789999999985 58888888888
Q ss_pred hCCCEEEEEcCCC---CHHH---H----HhcC--ccc-cChhhhccCCCEEEEec----CCchhh----H----hhccHH
Q psy6348 119 AFGMKVIGFDPMV---SVED---A----AKLN--IAS-LGLEDIWPLADYITVHT----PLIPQT----K----NLINAE 173 (333)
Q Consensus 119 ~~G~~V~~~d~~~---~~~~---a----~~~g--v~~-~~l~ell~~aDvV~l~~----P~t~~t----~----~li~~~ 173 (333)
.+|++|....|.. ..+. + ++.| ++. .+++|+++++|+|..-+ ....+. + -.++.+
T Consensus 177 ~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~w~s~g~e~~~~~~~~~~~~y~v~~~ 256 (321)
T 1oth_A 177 KFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKKRLQAFQGYQVTMK 256 (321)
T ss_dssp GGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCGGGHHHHHHHTTTCCBCHH
T ss_pred HcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEeccccccchhhhHHHHHhccCceECHH
Confidence 9999999998854 2211 1 1345 333 37999999999999843 111111 1 235788
Q ss_pred HHhccCCCcEEEEcc
Q psy6348 174 VLKKCKKGVRVVNVA 188 (333)
Q Consensus 174 ~~~~mk~gailIN~a 188 (333)
.++.+|++++|..|.
T Consensus 257 ~l~~a~~dai~mH~l 271 (321)
T 1oth_A 257 TAKVAASDWTFLHCL 271 (321)
T ss_dssp HHHTSCTTCEEEECS
T ss_pred HHhhcCCCCEEECCC
Confidence 888899999999983
No 292
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=96.84 E-value=0.0038 Score=62.12 Aligned_cols=99 Identities=18% Similarity=0.230 Sum_probs=67.3
Q ss_pred cccCCCEEEEEecCh----------HHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcC------------cccc-Chhhhc
Q psy6348 94 TELYGKTLAVLGLGR----------IGREVALRMQAFGMKVIGFDPMVSVEDAAKLN------------IASL-GLEDIW 150 (333)
Q Consensus 94 ~~l~gktvGIIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g------------v~~~-~l~ell 150 (333)
..+.|++|+|+|+-- =...+++.|...|.+|.+|||....+....++ +.++ ++++.+
T Consensus 324 ~~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (478)
T 2y0c_A 324 EDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAA 403 (478)
T ss_dssp SCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHTTTCHHHHTTEEECSSHHHHT
T ss_pred ccCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCccHHHHHhhccccccccccccceeecCCHHHHH
Confidence 357899999999843 45678999999999999999986332112222 4444 678899
Q ss_pred cCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchH
Q psy6348 151 PLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDEN 196 (333)
Q Consensus 151 ~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~ 196 (333)
++||+|++++.- ++-+.+--....+.|+ +.+++|+ |+ +.+.+
T Consensus 404 ~~ad~~vi~t~~-~~f~~~~~~~~~~~~~-~~~i~D~-r~-~~~~~ 445 (478)
T 2y0c_A 404 RDADALVIVTEW-KIFKSPDFVALGRLWK-TPVIFDG-RN-LYEPE 445 (478)
T ss_dssp TTCSEEEECSCC-GGGGSCCHHHHHTTCS-SCEEEES-SC-CSCHH
T ss_pred hCCCEEEEecCC-hHhhccCHHHHHhhcC-CCEEEEC-CC-CCCHH
Confidence 999999999874 3433332233445565 4788887 44 33443
No 293
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.84 E-value=0.0062 Score=56.16 Aligned_cols=70 Identities=21% Similarity=0.264 Sum_probs=51.2
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCCHH--HHHhcC-----ccccChhhhccCCCEEEEecCC
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVSVE--DAAKLN-----IASLGLEDIWPLADYITVHTPL 162 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~--~a~~~g-----v~~~~l~ell~~aDvV~l~~P~ 162 (333)
+.++.|+++.|+|.|-.+++++..|...|. +|++++|+.... .++..+ .......+.++++|+|+.++|.
T Consensus 120 g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~ 197 (269)
T 3tum_A 120 GFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPV 197 (269)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSST
T ss_pred CCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCcc
Confidence 567889999999999999999999999996 899999965321 122221 1112334456789999999884
No 294
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=96.84 E-value=0.024 Score=53.32 Aligned_cols=129 Identities=12% Similarity=0.001 Sum_probs=87.9
Q ss_pred hhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccC-CCEEEEEec-ChHHHHHHHH
Q psy6348 39 TAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELY-GKTLAVLGL-GRIGREVALR 116 (333)
Q Consensus 39 ~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~-gktvGIIGl-G~IG~~vA~~ 116 (333)
+.|...+|+|+|.-.....++- +++=++.+.++. | .+. |+||++||= +++..+++..
T Consensus 107 ~lA~~~~vPVINag~~~~HPtQ--aLaDl~Ti~e~~------------------g-~l~~gl~va~vGD~~~va~Sl~~~ 165 (307)
T 3tpf_A 107 EFARYSKAPVINALSELYHPTQ--VLGDLFTIKEWN------------------K-MQNGIAKVAFIGDSNNMCNSWLIT 165 (307)
T ss_dssp HHHHHCSSCEEEEECSSCCHHH--HHHHHHHHHHTT------------------C-CGGGCCEEEEESCSSHHHHHHHHH
T ss_pred HHHHhCCCCEEeCCCCCcCcHH--HHHHHHHHHHHh------------------C-CCCCCCEEEEEcCCCccHHHHHHH
Confidence 3455678999998766555553 333344433321 2 367 999999996 6788888899
Q ss_pred HhhCCCEEEEEcCCC---CHHH---HH----hcCcc--c-cChhhhccCCCEEEEec---CCch-h--------hHhhcc
Q psy6348 117 MQAFGMKVIGFDPMV---SVED---AA----KLNIA--S-LGLEDIWPLADYITVHT---PLIP-Q--------TKNLIN 171 (333)
Q Consensus 117 l~~~G~~V~~~d~~~---~~~~---a~----~~gv~--~-~~l~ell~~aDvV~l~~---P~t~-~--------t~~li~ 171 (333)
+..+|++|....|.. ..+. ++ +.|.. . .+++|.++++|+|..-. -..+ + ..-.++
T Consensus 166 ~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~~~~~~~~y~v~ 245 (307)
T 3tpf_A 166 AAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITDTWVSMGEENEKERKIKEFEGFMID 245 (307)
T ss_dssp HHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTGGGGHHHHHHHTGGGCBC
T ss_pred HHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecCcccCCchhhHHHHHHHhcccccC
Confidence 999999999988753 2221 11 34533 2 38999999999998865 1110 0 012358
Q ss_pred HHHHhccCCCcEEEEcc
Q psy6348 172 AEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 172 ~~~~~~mk~gailIN~a 188 (333)
.+.++.+|++++|..|.
T Consensus 246 ~e~l~~a~~~ai~mH~l 262 (307)
T 3tpf_A 246 EKAMSVANKDAILLHCL 262 (307)
T ss_dssp HHHHHHSCTTCEEEECS
T ss_pred HHHHHhcCCCcEEECCC
Confidence 88889999999999985
No 295
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.83 E-value=0.0015 Score=60.56 Aligned_cols=101 Identities=13% Similarity=0.072 Sum_probs=64.3
Q ss_pred CEEEEEecChHHHHHHHHHhh----CCCEEE-EEcCCCCHHHHHhcCccccChhhhcc--CCCEEEEecCCchhhHhhcc
Q psy6348 99 KTLAVLGLGRIGREVALRMQA----FGMKVI-GFDPMVSVEDAAKLNIASLGLEDIWP--LADYITVHTPLIPQTKNLIN 171 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~----~G~~V~-~~d~~~~~~~a~~~gv~~~~l~ell~--~aDvV~l~~P~t~~t~~li~ 171 (333)
.+|||||+|.||+..++.+.. -+++++ ++|+... ++..|+.+.+++++++ +.|+|++++|......
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~---a~~~g~~~~~~~ell~~~~vD~V~i~tp~~~H~~---- 80 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL---GSLDEVRQISLEDALRSQEIDVAYICSESSSHED---- 80 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC---CEETTEEBCCHHHHHHCSSEEEEEECSCGGGHHH----
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH---HHHcCCCCCCHHHHhcCCCCCEEEEeCCcHhHHH----
Confidence 489999999999999988865 367766 4676431 2334665568999986 6899999999543322
Q ss_pred HHHHhccCCCc-EEEEc-cCCcccchHhHHhhhhcCCc
Q psy6348 172 AEVLKKCKKGV-RVVNV-ARGGIVDENALLDSLKCGHC 207 (333)
Q Consensus 172 ~~~~~~mk~ga-ilIN~-aRg~~vd~~aL~~aL~~g~i 207 (333)
...+.++.|. +++.- ---.+-+.++|.++.++..+
T Consensus 81 -~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~ 117 (294)
T 1lc0_A 81 -YIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGR 117 (294)
T ss_dssp -HHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTC
T ss_pred -HHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCC
Confidence 2223344554 55543 12234445667776655443
No 296
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=96.83 E-value=0.0012 Score=61.58 Aligned_cols=104 Identities=19% Similarity=0.316 Sum_probs=69.9
Q ss_pred CCEEEEEec-ChHHHHHHHHHhhCCCEEE-EEcCCCCHHHHHhcCcccc-Chhhhcc--CCCEEEEecCCchhhHhhccH
Q psy6348 98 GKTLAVLGL-GRIGREVALRMQAFGMKVI-GFDPMVSVEDAAKLNIASL-GLEDIWP--LADYITVHTPLIPQTKNLINA 172 (333)
Q Consensus 98 gktvGIIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~a~~~gv~~~-~l~ell~--~aDvV~l~~P~t~~t~~li~~ 172 (333)
.++|+|+|+ |++|+.+++.++..|++++ ..+|..... +..|+... +++++.+ ..|++++++|. +.+...+ +
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~--~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~-~~~~~~~-~ 82 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGM--EVLGVPVYDTVKEAVAHHEVDASIIFVPA-PAAADAA-L 82 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHSCCSEEEECCCH-HHHHHHH-H
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCc--eECCEEeeCCHHHHhhcCCCCEEEEecCH-HHHHHHH-H
Confidence 468999999 9999999999998899854 677754111 13466654 7999988 89999999993 3444443 2
Q ss_pred HHHhccCCCcE-EEEccCC-cccchHhHHhhhhcCCce
Q psy6348 173 EVLKKCKKGVR-VVNVARG-GIVDENALLDSLKCGHCG 208 (333)
Q Consensus 173 ~~~~~mk~gai-lIN~aRg-~~vd~~aL~~aL~~g~i~ 208 (333)
+..+ .|.- +|..+.| ..-+++.+.++.++..+.
T Consensus 83 ea~~---~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~ 117 (288)
T 1oi7_A 83 EAAH---AGIPLIVLITEGIPTLDMVRAVEEIKALGSR 117 (288)
T ss_dssp HHHH---TTCSEEEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred HHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 2222 3322 5555555 223456788888776554
No 297
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.82 E-value=0.00084 Score=64.62 Aligned_cols=66 Identities=18% Similarity=0.251 Sum_probs=50.2
Q ss_pred CEEEEEecC-hHHHHHHHHHhhC-CCEEE-EEcCCCCH--HHHHhcCcccc-Chhhhcc--CCCEEEEecCCch
Q psy6348 99 KTLAVLGLG-RIGREVALRMQAF-GMKVI-GFDPMVSV--EDAAKLNIASL-GLEDIWP--LADYITVHTPLIP 164 (333)
Q Consensus 99 ktvGIIGlG-~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~a~~~gv~~~-~l~ell~--~aDvV~l~~P~t~ 164 (333)
.++||||+| .+|+.++..+... ++++. ++|+.... +.+++.|+... +++++++ +.|+|++++|...
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~ 76 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQF 76 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGG
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHH
Confidence 489999999 9999999988775 66766 57886522 33455677644 8999987 4999999999543
No 298
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=96.81 E-value=0.02 Score=54.59 Aligned_cols=131 Identities=15% Similarity=0.163 Sum_probs=87.3
Q ss_pred hhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEec-ChHHHHHHHHH
Q psy6348 39 TAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGL-GRIGREVALRM 117 (333)
Q Consensus 39 ~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGl-G~IG~~vA~~l 117 (333)
+.|...+|+|+|.-+....++- +++=++.+.++.+ .|..+.|+||++||= +++..+++..+
T Consensus 134 ~lA~~~~vPVINag~~~~HPtQ--aLaDl~Ti~e~~~----------------~G~~l~glkva~vGD~~rva~Sl~~~~ 195 (339)
T 4a8t_A 134 DLANCATIPVINGMSDYNHPTQ--ELGDLCTMVEHLP----------------EGKKLEDCKVVFVGDATQVCFSLGLIT 195 (339)
T ss_dssp HHHHHCSSCEEECCCSSCCHHH--HHHHHHHHHHTCC----------------TTCCGGGCEEEEESSCCHHHHHHHHHH
T ss_pred HHHHhCCCCEEECCCCCcCcHH--HHHHHHHHHHHhh----------------cCCCCCCCEEEEECCCchhHHHHHHHH
Confidence 3456678999999765555543 4444444443321 022588999999986 68889999999
Q ss_pred hhCCCEEEEEcCCC---CHHH-------HHhcCc--cc-cChhhhccCCCEEEEec--CC-----c-hh----h--Hhhc
Q psy6348 118 QAFGMKVIGFDPMV---SVED-------AAKLNI--AS-LGLEDIWPLADYITVHT--PL-----I-PQ----T--KNLI 170 (333)
Q Consensus 118 ~~~G~~V~~~d~~~---~~~~-------a~~~gv--~~-~~l~ell~~aDvV~l~~--P~-----t-~~----t--~~li 170 (333)
..+|++|....|.. ..+. +++.|. +. .+++ .++++|+|..-+ .. . .+ . .-.+
T Consensus 196 ~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd~w~smg~~~~~~~er~~~~~~~y~v 274 (339)
T 4a8t_A 196 TKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQV 274 (339)
T ss_dssp HHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEECCSSCCTTSCCCHHHHHHHHTTTTCB
T ss_pred HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEecCcccCCchhhhhHHHHHHhcccccc
Confidence 99999999998753 2221 234453 33 3788 999999999733 11 0 11 1 1335
Q ss_pred cHHHHhccCCCcEEEEcc
Q psy6348 171 NAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 171 ~~~~~~~mk~gailIN~a 188 (333)
+.+.++.+|++++|..|.
T Consensus 275 t~ell~~ak~dai~mHcL 292 (339)
T 4a8t_A 275 NQEMMDRAGANCKFMHCL 292 (339)
T ss_dssp CHHHHHHHCTTCEEEECS
T ss_pred CHHHHHhcCCCcEEECCC
Confidence 788888889999999984
No 299
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=96.80 E-value=0.0088 Score=55.84 Aligned_cols=101 Identities=16% Similarity=0.145 Sum_probs=72.0
Q ss_pred hHhhCCcEEEE-CCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEec---ChHHHHHHH
Q psy6348 40 AATRKGVLVLN-APGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGL---GRIGREVAL 115 (333)
Q Consensus 40 aa~~~gI~V~n-~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGl---G~IG~~vA~ 115 (333)
.|...+|+|.| .-|....++- +++=++.+.++ .| .+.|+||++||= +++..+++.
T Consensus 108 la~~~~vPVINAG~g~~~HPtQ--aLaDl~Ti~e~------------------~g-~l~gl~va~vGDl~~~rva~Sl~~ 166 (291)
T 3d6n_B 108 IVKSLNLRLVNAGDGTHQHPSQ--GLIDFFTIKEH------------------FG-EVKDLRVLYVGDIKHSRVFRSGAP 166 (291)
T ss_dssp HHHTCSSEEEEEEETTTBCHHH--HHHHHHHHHHH------------------HS-CCTTCEEEEESCCTTCHHHHHHHH
T ss_pred HHHhCCCCEEeCccCCCcCcHH--HHHHHHHHHHH------------------hC-CcCCcEEEEECCCCCCchHHHHHH
Confidence 45567899999 4455556654 33334433331 11 378999999997 899999999
Q ss_pred HHhhCCCEEEEEcCCC-CHHHHHhcCcccc-ChhhhccCCCEEEEecCC
Q psy6348 116 RMQAFGMKVIGFDPMV-SVEDAAKLNIASL-GLEDIWPLADYITVHTPL 162 (333)
Q Consensus 116 ~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~ 162 (333)
.+..+|++|....|.. .+....+.|++.. +++|+++++|+|.. +-.
T Consensus 167 ~~~~~g~~v~~~~P~~~~p~~~~~~g~~~~~d~~eav~~aDvvy~-~~~ 214 (291)
T 3d6n_B 167 LLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIW-LRL 214 (291)
T ss_dssp HHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHHHHCSEEEE-CCC
T ss_pred HHHHCCCEEEEECCchhCCchHHHCCCEEEcCHHHHhCCCCEEEE-eCc
Confidence 9999999999988743 1111334576543 89999999999998 654
No 300
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=96.78 E-value=0.0051 Score=59.01 Aligned_cols=129 Identities=19% Similarity=0.191 Sum_probs=88.9
Q ss_pred hHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEecC--hHHHHHHHHH
Q psy6348 40 AATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLG--RIGREVALRM 117 (333)
Q Consensus 40 aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~l 117 (333)
.|.-.+|+|.|.-+....++- +++=++.+.++ .| .+.|.+|++||=| ++..+++..+
T Consensus 139 lA~~s~vPVINa~~~~~HPtQ--aLaDl~Ti~E~------------------~g-~l~gl~va~vGD~~~rva~Sl~~~~ 197 (359)
T 2w37_A 139 LARDSGVPVWNGLTDEWHPTQ--MLADFMTVKEN------------------FG-KLQGLTLTFMGDGRNNVANSLLVTG 197 (359)
T ss_dssp HHHHSSSCEEEEECSSCCHHH--HHHHHHHHHHH------------------HS-CCTTCEEEEESCTTSHHHHHHHHHH
T ss_pred HHHhCCCCEEcCCCCCCCccH--HHHHHHHHHHH------------------hC-CcCCeEEEEECCCccchHHHHHHHH
Confidence 445678999998765555654 34444443331 12 4789999999986 9999999999
Q ss_pred hhCCCEEEEEcCCC---CHHH---H----HhcCc--cc-cChhhhccCCCEEEEecC----C--chh-----hHhhccHH
Q psy6348 118 QAFGMKVIGFDPMV---SVED---A----AKLNI--AS-LGLEDIWPLADYITVHTP----L--IPQ-----TKNLINAE 173 (333)
Q Consensus 118 ~~~G~~V~~~d~~~---~~~~---a----~~~gv--~~-~~l~ell~~aDvV~l~~P----~--t~~-----t~~li~~~ 173 (333)
..+|++|....|.. ..+. + ++.|. +. .+++|+++++|+|..-+= . ..+ ..-.++.+
T Consensus 198 ~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~ee~~er~~~~~~y~v~~e 277 (359)
T 2w37_A 198 AILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDVWVSMGESNWEERVKELTPYQVNME 277 (359)
T ss_dssp HHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSCCTTCTTHHHHHHHHGGGCBCHH
T ss_pred HHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEcccccccccchHHHHHHhhccccCHH
Confidence 99999999998753 2211 1 24563 33 379999999999988442 0 011 12345788
Q ss_pred HHhccC---CCcEEEEccC
Q psy6348 174 VLKKCK---KGVRVVNVAR 189 (333)
Q Consensus 174 ~~~~mk---~gailIN~aR 189 (333)
.++.+| ++++|..|.=
T Consensus 278 ll~~ak~~~~dai~MHcLP 296 (359)
T 2w37_A 278 AMKKTGTPDDQLIFMHCLP 296 (359)
T ss_dssp HHHTTCCCGGGCEEEECSC
T ss_pred HHHhhCCCCCCEEEECCCC
Confidence 888889 8999999853
No 301
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.75 E-value=0.0022 Score=61.10 Aligned_cols=64 Identities=28% Similarity=0.309 Sum_probs=42.9
Q ss_pred EEEEEecChHHHHHHHHHhhC-CCEEEEE-cCCCCH--HHHHhcCcccc------------------ChhhhccCCCEEE
Q psy6348 100 TLAVLGLGRIGREVALRMQAF-GMKVIGF-DPMVSV--EDAAKLNIASL------------------GLEDIWPLADYIT 157 (333)
Q Consensus 100 tvGIIGlG~IG~~vA~~l~~~-G~~V~~~-d~~~~~--~~a~~~gv~~~------------------~l~ell~~aDvV~ 157 (333)
+|||+|+|+||+.+++.+... ++++.+. |+.... ..+.+.|+... ++++++.++|+|+
T Consensus 3 kVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV~ 82 (340)
T 1b7g_O 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV 82 (340)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred EEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEEE
Confidence 799999999999999998764 5777654 554322 22333343221 2335556799999
Q ss_pred EecCCc
Q psy6348 158 VHTPLI 163 (333)
Q Consensus 158 l~~P~t 163 (333)
.|+|..
T Consensus 83 ~aTp~~ 88 (340)
T 1b7g_O 83 DTTPNG 88 (340)
T ss_dssp ECCSTT
T ss_pred ECCCCc
Confidence 999843
No 302
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=96.74 E-value=0.0024 Score=60.04 Aligned_cols=107 Identities=17% Similarity=0.185 Sum_probs=73.3
Q ss_pred ccCCCEEEEE-ec-ChHHHHHHHHHhhCCCEEE-EEcCCCCHHHHHhcCcccc-Chhhhcc--CCCEEEEecCCchhhHh
Q psy6348 95 ELYGKTLAVL-GL-GRIGREVALRMQAFGMKVI-GFDPMVSVEDAAKLNIASL-GLEDIWP--LADYITVHTPLIPQTKN 168 (333)
Q Consensus 95 ~l~gktvGII-Gl-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~a~~~gv~~~-~l~ell~--~aDvV~l~~P~t~~t~~ 168 (333)
-+..+++.|| |+ |+.|+.+++.++..|++++ ..+|....+ +..|+... +++|+.+ ..|++++++|. +....
T Consensus 10 l~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~--~i~G~~vy~sl~el~~~~~vD~avI~vP~-~~~~~ 86 (305)
T 2fp4_A 10 YVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGK--THLGLPVFNTVKEAKEQTGATASVIYVPP-PFAAA 86 (305)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHHCCCEEEECCCH-HHHHH
T ss_pred HhCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcc--eECCeeeechHHHhhhcCCCCEEEEecCH-HHHHH
Confidence 3566789999 99 9999999999999999954 567753111 13577655 7999988 89999999993 33344
Q ss_pred hccHHHHhccCCC-cEEEEccCCcc-cchHhHHhhhhcC-Cce
Q psy6348 169 LINAEVLKKCKKG-VRVVNVARGGI-VDENALLDSLKCG-HCG 208 (333)
Q Consensus 169 li~~~~~~~mk~g-ailIN~aRg~~-vd~~aL~~aL~~g-~i~ 208 (333)
.+ ++..+ .| ..+|+.+-|-. -++..+.+..++. .+.
T Consensus 87 ~~-~e~i~---~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~ 125 (305)
T 2fp4_A 87 AI-NEAID---AEVPLVVCITEGIPQQDMVRVKHRLLRQGKTR 125 (305)
T ss_dssp HH-HHHHH---TTCSEEEECCCCCCHHHHHHHHHHHTTCSSCE
T ss_pred HH-HHHHH---CCCCEEEEECCCCChHHHHHHHHHHHhcCCcE
Confidence 43 33322 23 24566777642 3344788888877 654
No 303
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.74 E-value=0.0032 Score=62.24 Aligned_cols=71 Identities=10% Similarity=-0.038 Sum_probs=52.8
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHH---hcCcccc--C-hhhhccCCCEEEEecCCch
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAA---KLNIASL--G-LEDIWPLADYITVHTPLIP 164 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~---~~gv~~~--~-l~ell~~aDvV~l~~P~t~ 164 (333)
..++.||++.|||.|.+|.+.++.|...|.+|.++|+....+... +.++++. . -++.+.++|+|+.+.. .+
T Consensus 7 ~~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at~-~~ 83 (457)
T 1pjq_A 7 FCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATD-DD 83 (457)
T ss_dssp EECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCS-CH
T ss_pred EEECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEcCC-CH
Confidence 357889999999999999999999999999999999977554322 1234432 2 2345678998888654 44
No 304
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=96.72 E-value=0.002 Score=63.21 Aligned_cols=65 Identities=14% Similarity=0.231 Sum_probs=50.2
Q ss_pred CEEEEEec----ChHHHHHHHHHhhC--CCEEE-EEcCCCCH--HHHHhcCcc----ccChhhhcc--CCCEEEEecCCc
Q psy6348 99 KTLAVLGL----GRIGREVALRMQAF--GMKVI-GFDPMVSV--EDAAKLNIA----SLGLEDIWP--LADYITVHTPLI 163 (333)
Q Consensus 99 ktvGIIGl----G~IG~~vA~~l~~~--G~~V~-~~d~~~~~--~~a~~~gv~----~~~l~ell~--~aDvV~l~~P~t 163 (333)
.+|||||+ |.||+..++.++.. +++++ ++|+.... +.+++.|+. +.++++++. +.|+|++++|..
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 100 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQVA 100 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSCHH
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCCcH
Confidence 58999999 99999999999886 77864 67886532 234556764 348999986 699999999943
No 305
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=96.72 E-value=0.022 Score=54.54 Aligned_cols=131 Identities=14% Similarity=0.149 Sum_probs=87.0
Q ss_pred hhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEec-ChHHHHHHHHH
Q psy6348 39 TAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGL-GRIGREVALRM 117 (333)
Q Consensus 39 ~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGl-G~IG~~vA~~l 117 (333)
+.|...+|+|+|.-+....++- +++=++.+.++.+. |..+.|+||++||= +++..+++..+
T Consensus 112 ~lA~~~~vPVINag~~~~HPtQ--aLaDl~TI~E~~~~----------------G~~l~glkva~vGD~~rva~Sl~~~~ 173 (355)
T 4a8p_A 112 DLANCATIPVINGMSDYNHPTQ--ELGDLCTMVEHLPE----------------GKKLEDCKVVFVGDATQVCFSLGLIT 173 (355)
T ss_dssp HHHHHCSSCEEECCCSSCCHHH--HHHHHHHHHHTCCT----------------TCCGGGCEEEEESCCCHHHHHHHHHH
T ss_pred HHHHhCCCCEEeCCCCCCCcHH--HHHHHHHHHHHhhc----------------CCCCCCCEEEEECCCchhHHHHHHHH
Confidence 3456688999999765555543 44444444433210 22478999999986 68889999999
Q ss_pred hhCCCEEEEEcCCC---CHHH-------HHhcCc--cc-cChhhhccCCCEEEEec----CCc----hh----h--Hhhc
Q psy6348 118 QAFGMKVIGFDPMV---SVED-------AAKLNI--AS-LGLEDIWPLADYITVHT----PLI----PQ----T--KNLI 170 (333)
Q Consensus 118 ~~~G~~V~~~d~~~---~~~~-------a~~~gv--~~-~~l~ell~~aDvV~l~~----P~t----~~----t--~~li 170 (333)
..+|++|....|.. +... +++.|. +. .+++ .++++|+|..-+ ... .+ . .-.+
T Consensus 174 ~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd~w~smgq~~~~~~er~~~~~~~y~v 252 (355)
T 4a8p_A 174 TKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQV 252 (355)
T ss_dssp HHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEECCSSEETTEECCHHHHHHHHTTTTCB
T ss_pred HHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEecccccCcchhhhhHHHHHHhcccccc
Confidence 99999999998753 2221 233453 32 3788 999999999633 100 11 0 1335
Q ss_pred cHHHHhccCCCcEEEEcc
Q psy6348 171 NAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 171 ~~~~~~~mk~gailIN~a 188 (333)
+.+.++.+|++++|..|.
T Consensus 253 t~ell~~ak~dai~MHcL 270 (355)
T 4a8p_A 253 NQEMMDRAGANCKFMHCL 270 (355)
T ss_dssp CHHHHHHHCTTCEEEECS
T ss_pred CHHHHHhcCCCcEEECCC
Confidence 778888889999999884
No 306
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=96.71 E-value=0.0042 Score=61.58 Aligned_cols=114 Identities=17% Similarity=0.151 Sum_probs=67.9
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCCEEEE--------EcCCC-CHHHH------Hhc-------------Ccccc
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGMKVIG--------FDPMV-SVEDA------AKL-------------NIASL 144 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~--------~d~~~-~~~~a------~~~-------------gv~~~ 144 (333)
|.++.|+|+.|-|+|++|+..|+.|..+|.+|++ |||.- +.+.. ++. +.+++
T Consensus 247 G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v 326 (470)
T 2bma_A 247 NIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYF 326 (470)
T ss_dssp TCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEEC
T ss_pred cCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEe
Confidence 5678999999999999999999999999999984 34432 22211 110 12222
Q ss_pred Chhhhc-cCCCEEEEecCCchhhHhhccHHHHhcc-CCCc-EEEEccCCcccchHhHHhhhhcCCceEEEecc
Q psy6348 145 GLEDIW-PLADYITVHTPLIPQTKNLINAEVLKKC-KKGV-RVVNVARGGIVDENALLDSLKCGHCGGAALDV 214 (333)
Q Consensus 145 ~l~ell-~~aDvV~l~~P~t~~t~~li~~~~~~~m-k~ga-ilIN~aRg~~vd~~aL~~aL~~g~i~gaalDV 214 (333)
+.++++ ..||+++-|. +.+.|+.+....+ +.++ +++-.|-+. ...++ .+.|.+..+. ++=|.
T Consensus 327 ~~~~~~~~~~DI~iPcA-----~~~~I~~~na~~l~~~~ak~V~EgAN~p-~T~eA-~~~L~~rGIl-~~PD~ 391 (470)
T 2bma_A 327 PNEKPWGVPCTLAFPCA-----TQNDVDLDQAKLLQKNGCILVGEGANMP-STVDA-INLFKSNNII-YCPSK 391 (470)
T ss_dssp SSCCTTSSCCSEEEECS-----STTCBCSHHHHHHHHTTCCEEECCSSSC-BCHHH-HHHHHHTTCE-EECHH
T ss_pred cCcCeeecCccEEEecc-----ccCcCCHHHHHHHHhcCcEEEEeCCCCC-CCHHH-HHHHHHCCcE-EEChH
Confidence 223333 3688877764 3555666555555 2233 344444444 45555 5666666664 44444
No 307
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=96.71 E-value=0.014 Score=57.13 Aligned_cols=115 Identities=23% Similarity=0.274 Sum_probs=73.9
Q ss_pred CccccCCCEEEEEecChHHHHHHHHHhh-CCCEEEE--------EcCCC-CHHHHH----hcC-------ccccChhhhc
Q psy6348 92 TGTELYGKTLAVLGLGRIGREVALRMQA-FGMKVIG--------FDPMV-SVEDAA----KLN-------IASLGLEDIW 150 (333)
Q Consensus 92 ~g~~l~gktvGIIGlG~IG~~vA~~l~~-~G~~V~~--------~d~~~-~~~~a~----~~g-------v~~~~l~ell 150 (333)
.|.++.|+++.|.|+|++|+..|+.|.. .|.+|++ |||.- ..+... +.+ .+..+.++++
T Consensus 203 ~g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil 282 (415)
T 2tmg_A 203 LGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELL 282 (415)
T ss_dssp TTCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHT
T ss_pred cCCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhh
Confidence 3567999999999999999999999998 9999984 33321 222221 112 1233455655
Q ss_pred -cCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccC
Q psy6348 151 -PLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVF 215 (333)
Q Consensus 151 -~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~ 215 (333)
.+||+++-|.. .+.++.+....++ -.+++-.+-+.+ ..++ .+.|.+..+. ++=|..
T Consensus 283 ~~~~DIliP~A~-----~n~i~~~~a~~l~-ak~V~EgAN~p~-t~~a-~~~l~~~Gi~-~~PD~~ 339 (415)
T 2tmg_A 283 ELDVDILVPAAL-----EGAIHAGNAERIK-AKAVVEGANGPT-TPEA-DEILSRRGIL-VVPDIL 339 (415)
T ss_dssp TCSCSEEEECSS-----TTSBCHHHHTTCC-CSEEECCSSSCB-CHHH-HHHHHHTTCE-EECHHH
T ss_pred cCCCcEEEecCC-----cCccCcccHHHcC-CeEEEeCCCccc-CHHH-HHHHHHCCCE-EEChHH
Confidence 37999998864 4567777777773 446666666665 3333 3556666554 454443
No 308
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.70 E-value=0.0074 Score=52.02 Aligned_cols=93 Identities=12% Similarity=0.135 Sum_probs=59.2
Q ss_pred CEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcccc--Chh----hhccCCCEEEEecCCchhhHh---
Q psy6348 99 KTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASL--GLE----DIWPLADYITVHTPLIPQTKN--- 168 (333)
Q Consensus 99 ktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~--~l~----ell~~aDvV~l~~P~t~~t~~--- 168 (333)
++|.|.|. |.||+.+++.|.+.|++|++.+|..........+++.+ ++. +.+..+|+|+.+.........
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~~ 80 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHV 80 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTSHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCCccccchHH
Confidence 47899995 99999999999999999999999753322111344322 222 577899999988865432111
Q ss_pred hccHHHHhccCC--CcEEEEccCCc
Q psy6348 169 LINAEVLKKCKK--GVRVVNVARGG 191 (333)
Q Consensus 169 li~~~~~~~mk~--gailIN~aRg~ 191 (333)
......++.|++ ...+|+++...
T Consensus 81 ~~~~~l~~a~~~~~~~~~v~~SS~~ 105 (221)
T 3ew7_A 81 TSLDHLISVLNGTVSPRLLVVGGAA 105 (221)
T ss_dssp HHHHHHHHHHCSCCSSEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCceEEEEecce
Confidence 111334444543 35677776543
No 309
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.69 E-value=0.0018 Score=62.08 Aligned_cols=65 Identities=25% Similarity=0.355 Sum_probs=47.1
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcC-c---cc---cChhhhccCCCEEEE
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLN-I---AS---LGLEDIWPLADYITV 158 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g-v---~~---~~l~ell~~aDvV~l 158 (333)
..+.|++|+|+|.|.+|+.+++.++.+|++|+++|++.......-.. . .+ ..+.++++++|+|+.
T Consensus 8 ~~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 8 KLKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 34679999999999999999999999999999999875321111001 0 01 125667788999876
No 310
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=96.69 E-value=0.0014 Score=63.46 Aligned_cols=66 Identities=17% Similarity=0.165 Sum_probs=48.7
Q ss_pred CEEEEEecChHHHHHHHHHhhC---------CCEEEE-EcCCCC--HHHHHhcCcc--ccChhhhcc--CCCEEEEecCC
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF---------GMKVIG-FDPMVS--VEDAAKLNIA--SLGLEDIWP--LADYITVHTPL 162 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~---------G~~V~~-~d~~~~--~~~a~~~gv~--~~~l~ell~--~aDvV~l~~P~ 162 (333)
.+|||||+|.||+..+..++.. +.+|.+ +|+... .+.++++|+. +.+++++++ +.|+|++++|.
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp~ 106 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSPN 106 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCCc
Confidence 3899999999999988877653 456664 687652 2344666764 348999985 58999999995
Q ss_pred ch
Q psy6348 163 IP 164 (333)
Q Consensus 163 t~ 164 (333)
..
T Consensus 107 ~~ 108 (412)
T 4gqa_A 107 HL 108 (412)
T ss_dssp GG
T ss_pred HH
Confidence 44
No 311
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=96.69 E-value=0.0021 Score=60.67 Aligned_cols=66 Identities=17% Similarity=0.121 Sum_probs=49.4
Q ss_pred CEEEEEecC-hHHHHHHHHHhhC--CCEE-EEEcCCCCH--HHHHhcCc-c-ccChhhhcc--CCCEEEEecCCch
Q psy6348 99 KTLAVLGLG-RIGREVALRMQAF--GMKV-IGFDPMVSV--EDAAKLNI-A-SLGLEDIWP--LADYITVHTPLIP 164 (333)
Q Consensus 99 ktvGIIGlG-~IG~~vA~~l~~~--G~~V-~~~d~~~~~--~~a~~~gv-~-~~~l~ell~--~aDvV~l~~P~t~ 164 (333)
.++||||+| .+|+..+..++.. ++++ .++|+.... +.+++.|+ . +.++++++. +.|+|++++|...
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 94 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVEL 94 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGGG
T ss_pred eeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCchH
Confidence 489999999 8999999998876 5676 457886522 23455665 3 348999986 5899999999543
No 312
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=96.68 E-value=0.0013 Score=63.51 Aligned_cols=67 Identities=15% Similarity=0.121 Sum_probs=50.6
Q ss_pred CCEEEEEecCh---HHHHHHHHHhhCC-CEEEE--EcCCCC--HHHHHhcCcc---c-cChhhhccC-------CCEEEE
Q psy6348 98 GKTLAVLGLGR---IGREVALRMQAFG-MKVIG--FDPMVS--VEDAAKLNIA---S-LGLEDIWPL-------ADYITV 158 (333)
Q Consensus 98 gktvGIIGlG~---IG~~vA~~l~~~G-~~V~~--~d~~~~--~~~a~~~gv~---~-~~l~ell~~-------aDvV~l 158 (333)
-.++||||+|. ||+..+..++..+ +++++ +|+... .+.++++|+. . .++++++.. .|+|++
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i 91 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSI 91 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEE
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEEE
Confidence 35899999999 9999988887655 67764 688653 2345667873 3 389999864 999999
Q ss_pred ecCCch
Q psy6348 159 HTPLIP 164 (333)
Q Consensus 159 ~~P~t~ 164 (333)
++|...
T Consensus 92 ~tp~~~ 97 (398)
T 3dty_A 92 ATPNGT 97 (398)
T ss_dssp ESCGGG
T ss_pred CCCcHH
Confidence 999543
No 313
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.68 E-value=0.0032 Score=60.15 Aligned_cols=86 Identities=13% Similarity=0.105 Sum_probs=53.3
Q ss_pred CEEEEEe-cChHHHHHHHHHhhCC-CEEEEEc--CCCC-HHHHHhcC---------------ccccChhhhcc-CCCEEE
Q psy6348 99 KTLAVLG-LGRIGREVALRMQAFG-MKVIGFD--PMVS-VEDAAKLN---------------IASLGLEDIWP-LADYIT 157 (333)
Q Consensus 99 ktvGIIG-lG~IG~~vA~~l~~~G-~~V~~~d--~~~~-~~~a~~~g---------------v~~~~l~ell~-~aDvV~ 157 (333)
.+|||+| .|.||+.+++.|.... ++|.+.. +... .......+ +...+++++++ ++|+|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~ 88 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVF 88 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEEE
Confidence 4899999 8999999999997654 6876663 3221 11111111 11124566657 899999
Q ss_pred EecCCchhhHhhccHHHHhccCCCcEEEEccC
Q psy6348 158 VHTPLIPQTKNLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 158 l~~P~t~~t~~li~~~~~~~mk~gailIN~aR 189 (333)
+|+|.. .+.... . ..++.|+.+|+.+-
T Consensus 89 ~atp~~-~~~~~a-~---~~~~aG~~VId~s~ 115 (354)
T 1ys4_A 89 SALPSD-LAKKFE-P---EFAKEGKLIFSNAS 115 (354)
T ss_dssp ECCCHH-HHHHHH-H---HHHHTTCEEEECCS
T ss_pred ECCCch-HHHHHH-H---HHHHCCCEEEECCc
Confidence 999832 222221 2 22357888998864
No 314
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=96.67 E-value=0.012 Score=55.80 Aligned_cols=136 Identities=13% Similarity=0.021 Sum_probs=88.5
Q ss_pred hhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEecC--hHHHHHHHH
Q psy6348 39 TAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLG--RIGREVALR 116 (333)
Q Consensus 39 ~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~ 116 (333)
+.|...+|+|+|.-.....++- +++=++.+.++.. |.. .....+.|+||++||=| ++..+++..
T Consensus 116 ~lA~~~~vPVINag~~~~HPtQ--aLaDl~Ti~e~~g----------~~~--~~~~~l~gl~va~vGD~~~~va~Sl~~~ 181 (328)
T 3grf_A 116 EMAQHASVPCINALDDFGHPLQ--MVCDFMTIKEKFT----------AAG--EFSNGFKGIKFAYCGDSMNNVTYDLMRG 181 (328)
T ss_dssp HHHHHCSSCEEESSCSSCCHHH--HHHHHHHHHHHHH----------HTT--CCTTTGGGCCEEEESCCSSHHHHHHHHH
T ss_pred HHHHhCCCCEEeCCCCCCCcHH--HHHHHHHHHHHhC----------Ccc--ccccccCCcEEEEeCCCCcchHHHHHHH
Confidence 3456678999999776655553 3333444333211 100 01235889999999986 888999999
Q ss_pred HhhCCCEEEEEcCCC-C----HH---HHH----h--cCc--cc-cChhhhccCCCEEEEec----CCch----h-----h
Q psy6348 117 MQAFGMKVIGFDPMV-S----VE---DAA----K--LNI--AS-LGLEDIWPLADYITVHT----PLIP----Q-----T 166 (333)
Q Consensus 117 l~~~G~~V~~~d~~~-~----~~---~a~----~--~gv--~~-~~l~ell~~aDvV~l~~----P~t~----~-----t 166 (333)
+..+|++|....|.. . .+ .++ + .|. +. .+++|.++++|+|..-+ ...+ + .
T Consensus 182 ~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvytd~W~sm~iq~er~~~~~~~~~ 261 (328)
T 3grf_A 182 CALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDVVYTDSWMSYHITKEQKEARLKVLT 261 (328)
T ss_dssp HHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSEEEECCCC--------CCTHHHHHG
T ss_pred HHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCEEEecCccccCCcHHHHHHHHHHhc
Confidence 999999999988743 2 11 122 2 453 22 38999999999998631 1011 1 1
Q ss_pred HhhccHHHHhccCCCcEEEEcc
Q psy6348 167 KNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 167 ~~li~~~~~~~mk~gailIN~a 188 (333)
.-.++.+.++.+|++++|..|.
T Consensus 262 ~y~vt~~~l~~a~~~ai~mH~l 283 (328)
T 3grf_A 262 PFQVDDAVMAVTSKRSIFMNCL 283 (328)
T ss_dssp GGCBCHHHHTTSCTTCEEEECS
T ss_pred CCCCCHHHHHhcCCCCEEECCC
Confidence 1236888899999999999984
No 315
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.67 E-value=0.0033 Score=59.66 Aligned_cols=90 Identities=24% Similarity=0.275 Sum_probs=64.3
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc-Ch------h-hhccCCCEEEEecCCchhhH
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL-GL------E-DIWPLADYITVHTPLIPQTK 167 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~-~l------~-ell~~aDvV~l~~P~t~~t~ 167 (333)
.|++|.|+|.|.+|...++.++.+|.+|++.++.. ..+.++++|...+ +. . ++....|+|+-+++.++ .
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~--~ 256 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLT--D 256 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCST--T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCc--H
Confidence 48899999999999999999999999999999766 4566777776432 21 1 12246899988886420 0
Q ss_pred hhccHHHHhccCCCcEEEEccC
Q psy6348 168 NLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 168 ~li~~~~~~~mk~gailIN~aR 189 (333)
. .-...++.++++..++.++.
T Consensus 257 ~-~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 257 I-DFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp C-CTTTGGGGEEEEEEEEECCC
T ss_pred H-HHHHHHHHhcCCCEEEEecC
Confidence 1 11345567888888888754
No 316
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=96.65 E-value=0.0051 Score=60.53 Aligned_cols=86 Identities=17% Similarity=0.257 Sum_probs=63.7
Q ss_pred cCCCEEEEEecCh----------HHHHHHHHHhhC-CCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEecCCch
Q psy6348 96 LYGKTLAVLGLGR----------IGREVALRMQAF-GMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVHTPLIP 164 (333)
Q Consensus 96 l~gktvGIIGlG~----------IG~~vA~~l~~~-G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~ 164 (333)
+.|++|+|+|+-- -...+++.|... |.+|.+|||....+ ....++++.+++||.|+++++ .+
T Consensus 313 ~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~------~~~~~~~~~~~~ad~vvi~t~-~~ 385 (431)
T 3ojo_A 313 LSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD------FVEHDMSHAVKDASLVLILSD-HS 385 (431)
T ss_dssp SSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT------TBCSTTHHHHTTCSEEEECSC-CG
T ss_pred cCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc------cccCCHHHHHhCCCEEEEecC-CH
Confidence 5899999999842 467899999999 99999999987542 223478899999999999987 34
Q ss_pred hhHhhccHHHHhccCCCcEEEEccCCc
Q psy6348 165 QTKNLINAEVLKKCKKGVRVVNVARGG 191 (333)
Q Consensus 165 ~t~~li~~~~~~~mk~gailIN~aRg~ 191 (333)
+-+.+ +.+.++.|+ +.+++|. |+-
T Consensus 386 ~f~~~-d~~~~~~~~-~~~i~D~-r~~ 409 (431)
T 3ojo_A 386 EFKNL-SDSHFDKMK-HKVIFDT-KNV 409 (431)
T ss_dssp GGTSC-CGGGGTTCS-SCEEEES-SCC
T ss_pred HHhcc-CHHHHHhCC-CCEEEEC-CCC
Confidence 43333 333446676 6788885 443
No 317
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=96.64 E-value=0.0016 Score=62.08 Aligned_cols=65 Identities=12% Similarity=0.106 Sum_probs=48.3
Q ss_pred CEEEEEecChHHHH-HHHHHhhC-CCEEE-EEcCCCCHHHHHhc-Cccc-cChhhhccC--CCEEEEecCCch
Q psy6348 99 KTLAVLGLGRIGRE-VALRMQAF-GMKVI-GFDPMVSVEDAAKL-NIAS-LGLEDIWPL--ADYITVHTPLIP 164 (333)
Q Consensus 99 ktvGIIGlG~IG~~-vA~~l~~~-G~~V~-~~d~~~~~~~a~~~-gv~~-~~l~ell~~--aDvV~l~~P~t~ 164 (333)
.++||||+|.||+. .+..++.. +++|. ++|+.... .+++. ++.. .++++++.+ .|+|++|+|...
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~-~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 77 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKEL-SKERYPQASIVRSFKELTEDPEIDLIVVNTPDNT 77 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCG-GGTTCTTSEEESCSHHHHTCTTCCEEEECSCGGG
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH-HHHhCCCCceECCHHHHhcCCCCCEEEEeCChHH
Confidence 48999999999997 67777665 77876 56877543 23344 4443 489999976 999999999543
No 318
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.64 E-value=0.0028 Score=60.06 Aligned_cols=65 Identities=29% Similarity=0.317 Sum_probs=46.2
Q ss_pred EEEEEecChHHHHHHHHHhhC-CCEEEE-EcCCCCH--HHHHhcCcc------------------c-cChhhhccCCCEE
Q psy6348 100 TLAVLGLGRIGREVALRMQAF-GMKVIG-FDPMVSV--EDAAKLNIA------------------S-LGLEDIWPLADYI 156 (333)
Q Consensus 100 tvGIIGlG~IG~~vA~~l~~~-G~~V~~-~d~~~~~--~~a~~~gv~------------------~-~~l~ell~~aDvV 156 (333)
++||+|+|.||+.+++.+... ++++.+ +|+.... ..++..|+. . .++++++.++|+|
T Consensus 4 rVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDvV 83 (334)
T 2czc_A 4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDII 83 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSEE
T ss_pred EEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCEE
Confidence 899999999999999998765 567655 4654322 223333321 1 2678888899999
Q ss_pred EEecCCch
Q psy6348 157 TVHTPLIP 164 (333)
Q Consensus 157 ~l~~P~t~ 164 (333)
+.|+|...
T Consensus 84 ~~aTp~~~ 91 (334)
T 2czc_A 84 VDATPGGI 91 (334)
T ss_dssp EECCSTTH
T ss_pred EECCCccc
Confidence 99999543
No 319
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=96.64 E-value=0.0071 Score=60.15 Aligned_cols=101 Identities=20% Similarity=0.181 Sum_probs=69.5
Q ss_pred ccCCCEEEEEecC----------hHHHHHHHHHhhCCCEEEEEcCCCCHHHH----Hh-cC-------ccc-cChhhhcc
Q psy6348 95 ELYGKTLAVLGLG----------RIGREVALRMQAFGMKVIGFDPMVSVEDA----AK-LN-------IAS-LGLEDIWP 151 (333)
Q Consensus 95 ~l~gktvGIIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~a----~~-~g-------v~~-~~l~ell~ 151 (333)
.+.|++|+|+|+- .-...+++.|...|.+|.+|||....+.+ .+ ++ +.+ .++.+.++
T Consensus 332 ~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (481)
T 2o3j_A 332 TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYAAAR 411 (481)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHHHHT
T ss_pred ccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHhhhccccccCceeecCCHHHHHc
Confidence 4789999999974 35678899999999999999998754322 11 11 333 25678899
Q ss_pred CCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhH
Q psy6348 152 LADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENAL 198 (333)
Q Consensus 152 ~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL 198 (333)
++|.|++++.- ++-+.+=-....+.|+...++++. |+ ++|.+.+
T Consensus 412 ~ad~~vi~t~~-~~f~~~~~~~~~~~~~~~~~i~D~-r~-~~~~~~~ 455 (481)
T 2o3j_A 412 GAHAIVVLTEW-DEFVELNYSQIHNDMQHPAAIFDG-RL-ILDQKAL 455 (481)
T ss_dssp TCSEEEECSCC-GGGTTSCHHHHHHHSCSSCEEEES-SS-CSCHHHH
T ss_pred CCCEEEEcCCc-HHhhccCHHHHHHhcCCCCEEEEC-CC-CCCHHHH
Confidence 99999999873 343433223445568776688886 54 3454443
No 320
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=96.64 E-value=0.0018 Score=62.53 Aligned_cols=65 Identities=15% Similarity=0.182 Sum_probs=50.3
Q ss_pred CCEEEEEecChHHHHHHHHHhhC--CCEEEE-EcCCCC--HHHHHhcCcccc-ChhhhccCCCEEEEecCCc
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAF--GMKVIG-FDPMVS--VEDAAKLNIASL-GLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~--G~~V~~-~d~~~~--~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t 163 (333)
-.+|||||.| +|+.-++.++.. ++++.+ +|+... .+.++++|+... ++++++.+.|++++++|..
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~ 77 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRST 77 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCc
Confidence 3589999999 799888877765 678775 687663 345677888654 8999999999999999954
No 321
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=96.63 E-value=0.0023 Score=62.32 Aligned_cols=66 Identities=12% Similarity=0.181 Sum_probs=49.1
Q ss_pred CEEEEEecCh---HHHHHHHHHhhCC-CEEE--EEcCCCC--HHHHHhcCcc---c-cChhhhccC-------CCEEEEe
Q psy6348 99 KTLAVLGLGR---IGREVALRMQAFG-MKVI--GFDPMVS--VEDAAKLNIA---S-LGLEDIWPL-------ADYITVH 159 (333)
Q Consensus 99 ktvGIIGlG~---IG~~vA~~l~~~G-~~V~--~~d~~~~--~~~a~~~gv~---~-~~l~ell~~-------aDvV~l~ 159 (333)
.+|||||+|. ||+..+..++..+ ++++ ++|+... .+.++++|+. . .+++++++. .|+|+++
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I~ 117 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAIV 117 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEEC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEEC
Confidence 4899999999 9999988877665 6776 4688653 2344567773 3 489999875 9999999
Q ss_pred cCCch
Q psy6348 160 TPLIP 164 (333)
Q Consensus 160 ~P~t~ 164 (333)
+|...
T Consensus 118 tp~~~ 122 (417)
T 3v5n_A 118 TPNHV 122 (417)
T ss_dssp SCTTS
T ss_pred CCcHH
Confidence 99644
No 322
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=96.63 E-value=0.0027 Score=59.61 Aligned_cols=112 Identities=13% Similarity=0.127 Sum_probs=66.7
Q ss_pred CEEEEEecChHHHHHHHHHhhCC--CEEEEEcCCCCHHH--HHhc--------Cccc-cChhhhccCCCEEEEecCCchh
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFG--MKVIGFDPMVSVED--AAKL--------NIAS-LGLEDIWPLADYITVHTPLIPQ 165 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G--~~V~~~d~~~~~~~--a~~~--------gv~~-~~l~ell~~aDvV~l~~P~t~~ 165 (333)
+||+|||.|.+|..++..+...+ -++..||....... +.++ .+.. .+-.+.+++||+|+++.+....
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~~ 80 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQR 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 48999999999999999888766 48999998642111 1111 1111 1346779999999999864321
Q ss_pred ---h--------Hhhcc--HHHHhccCCCcEEEEccCCcccchHhHHhh--hhcCCceEE
Q psy6348 166 ---T--------KNLIN--AEVLKKCKKGVRVVNVARGGIVDENALLDS--LKCGHCGGA 210 (333)
Q Consensus 166 ---t--------~~li~--~~~~~~mk~gailIN~aRg~~vd~~aL~~a--L~~g~i~ga 210 (333)
+ ..++. .+.+....|++++++++-.--+....+.+. +...++.|.
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~ 140 (310)
T 2xxj_A 81 PGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQVAYALSGLPPGRVVGS 140 (310)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCGGGEEEC
T ss_pred CCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCchHHHHHHHHHHcCCCHHHEEec
Confidence 0 11110 112233478999999854333333334333 334466555
No 323
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=96.59 E-value=0.0036 Score=58.53 Aligned_cols=65 Identities=20% Similarity=0.274 Sum_probs=48.4
Q ss_pred CEEEEEec-ChHHHHHHHHHhhCCCEEE-EEcCCCCHHHH-Hhc-Cccc-cChhhhc----------cCCCEEEEecCCc
Q psy6348 99 KTLAVLGL-GRIGREVALRMQAFGMKVI-GFDPMVSVEDA-AKL-NIAS-LGLEDIW----------PLADYITVHTPLI 163 (333)
Q Consensus 99 ktvGIIGl-G~IG~~vA~~l~~~G~~V~-~~d~~~~~~~a-~~~-gv~~-~~l~ell----------~~aDvV~l~~P~t 163 (333)
.++||||+ |.||+..++.++..+.+++ ++|+......+ +.. +... .++++++ .+.|+|++++|..
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~ 83 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNH 83 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGG
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCch
Confidence 58999999 7899999999998898865 46877644322 222 3333 3788887 6799999999954
No 324
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=96.59 E-value=0.0082 Score=56.40 Aligned_cols=96 Identities=18% Similarity=0.241 Sum_probs=61.3
Q ss_pred CEEEEEec-ChHHHHHHHHHhhCC--CEEEEEcCCCCHHHHHhcC-------ccc----cChhhhccCCCEEEEecCCch
Q psy6348 99 KTLAVLGL-GRIGREVALRMQAFG--MKVIGFDPMVSVEDAAKLN-------IAS----LGLEDIWPLADYITVHTPLIP 164 (333)
Q Consensus 99 ktvGIIGl-G~IG~~vA~~l~~~G--~~V~~~d~~~~~~~a~~~g-------v~~----~~l~ell~~aDvV~l~~P~t~ 164 (333)
.||+|||. |.+|..++..|...| .+|..+|.......+.++. +.. .++++.+++||+|+++.+...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~ 80 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR 80 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCC
Confidence 37999998 999999999998777 6899999865222222221 111 146778999999999975321
Q ss_pred h---hH--------hhcc--HHHHhccCCCcEEEEccCCcccchH
Q psy6348 165 Q---TK--------NLIN--AEVLKKCKKGVRVVNVARGGIVDEN 196 (333)
Q Consensus 165 ~---t~--------~li~--~~~~~~mk~gailIN~aRg~~vd~~ 196 (333)
. ++ .++. .+.+....|++++|++ ..++|.-
T Consensus 81 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~--sNPv~~~ 123 (314)
T 1mld_A 81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII--SNPVNST 123 (314)
T ss_dssp CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC--SSCHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE--CCCcchh
Confidence 1 10 1110 1122233588899997 4456654
No 325
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=96.57 E-value=0.0036 Score=58.69 Aligned_cols=66 Identities=20% Similarity=0.224 Sum_probs=48.4
Q ss_pred CEEEEEec-ChHHHHHHHHHhhCCCEEEE-EcCCCCHHHH-Hhc-Cccc-cChhhhc-----------cCCCEEEEecCC
Q psy6348 99 KTLAVLGL-GRIGREVALRMQAFGMKVIG-FDPMVSVEDA-AKL-NIAS-LGLEDIW-----------PLADYITVHTPL 162 (333)
Q Consensus 99 ktvGIIGl-G~IG~~vA~~l~~~G~~V~~-~d~~~~~~~a-~~~-gv~~-~~l~ell-----------~~aDvV~l~~P~ 162 (333)
.++||||+ |.||+..++.++..|.++++ +|+......+ +.. +... .++++++ .+.|+|++++|.
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~ 83 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPN 83 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCG
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCc
Confidence 58999999 79999999999988987654 6877643322 222 3333 3788876 579999999995
Q ss_pred ch
Q psy6348 163 IP 164 (333)
Q Consensus 163 t~ 164 (333)
..
T Consensus 84 ~~ 85 (318)
T 3oa2_A 84 YL 85 (318)
T ss_dssp GG
T ss_pred HH
Confidence 43
No 326
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.56 E-value=0.0057 Score=52.02 Aligned_cols=65 Identities=15% Similarity=0.071 Sum_probs=46.9
Q ss_pred CCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCCHHHHH-hcCccc--------cChhhhccCCCEEEEecCC
Q psy6348 98 GKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVSVEDAA-KLNIAS--------LGLEDIWPLADYITVHTPL 162 (333)
Q Consensus 98 gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~-~~gv~~--------~~l~ell~~aDvV~l~~P~ 162 (333)
++++.|.|. |.||+.+++.|.+.|++|++.++........ ..+++. .++.++++++|+|+.+...
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~ 77 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT 77 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccC
Confidence 479999998 9999999999999999999999864221100 112221 1355678889998887764
No 327
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=96.55 E-value=0.017 Score=54.72 Aligned_cols=128 Identities=19% Similarity=0.115 Sum_probs=85.0
Q ss_pred hHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEec-ChHHHHHHHHHh
Q psy6348 40 AATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGL-GRIGREVALRMQ 118 (333)
Q Consensus 40 aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGl-G~IG~~vA~~l~ 118 (333)
.|...+|+|+|.-.....++- +++=++.+.++ .| .+.|+||++||= +++..+++..+.
T Consensus 120 lA~~~~vPVINag~~~~HPtQ--aLaDl~Ti~e~------------------~g-~l~glkva~vGD~~rva~Sl~~~~~ 178 (323)
T 3gd5_A 120 YAHYAGIPVINALTDHEHPCQ--VVADLLTIREN------------------FG-RLAGLKLAYVGDGNNVAHSLLLGCA 178 (323)
T ss_dssp HHHHHCSCEEEEECSSCCHHH--HHHHHHHHHHH------------------HS-CCTTCEEEEESCCCHHHHHHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCCcHH--HHHHHHHHHHH------------------hC-CCCCCEEEEECCCCcHHHHHHHHHH
Confidence 345568999998665544543 33333333221 12 378999999996 688899999999
Q ss_pred hCCCEEEEEcCCC---CHHH-------HHhcCc--cc-cChhhhccCCCEEEEecCCch----------h--hHhhccHH
Q psy6348 119 AFGMKVIGFDPMV---SVED-------AAKLNI--AS-LGLEDIWPLADYITVHTPLIP----------Q--TKNLINAE 173 (333)
Q Consensus 119 ~~G~~V~~~d~~~---~~~~-------a~~~gv--~~-~~l~ell~~aDvV~l~~P~t~----------~--t~~li~~~ 173 (333)
.+|++|....|.. ..+. +++.|. +. .+++|+++++|+|..-.=-.. + ..-.++.+
T Consensus 179 ~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~wqs~g~~~~~~~~~~~~~~y~vt~e 258 (323)
T 3gd5_A 179 KVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDVWTSMGQEAETQHRLQLFEQYQINAA 258 (323)
T ss_dssp HHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCCC---------CCHHHHTTCCBCHH
T ss_pred HcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEeceecCCCcccchHHHHHhhccCCCHH
Confidence 9999999988753 2221 123453 33 389999999999987542111 0 01246888
Q ss_pred HHhccCCCcEEEEcc
Q psy6348 174 VLKKCKKGVRVVNVA 188 (333)
Q Consensus 174 ~~~~mk~gailIN~a 188 (333)
.++.+|++++|..|.
T Consensus 259 ll~~ak~dai~mHcl 273 (323)
T 3gd5_A 259 LLNCAAAEAIVLHCL 273 (323)
T ss_dssp HHHTSCTTCEEEECS
T ss_pred HHhhcCCCcEEECCC
Confidence 888899999999984
No 328
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.55 E-value=0.0033 Score=59.08 Aligned_cols=88 Identities=19% Similarity=0.212 Sum_probs=61.6
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc-C-----hhhh----ccCCCEEEEecCCchh
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL-G-----LEDI----WPLADYITVHTPLIPQ 165 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~-~-----l~el----l~~aDvV~l~~P~t~~ 165 (333)
.|+++.|+|.|.||...++.++.+|.+|++.++.. ..+.++++|...+ + +.+. ....|+|+-++...+.
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 243 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA 243 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHHH
Confidence 47899999999999999999999999999999865 3345566675321 1 1111 1357888877753221
Q ss_pred hHhhccHHHHhccCCCcEEEEccC
Q psy6348 166 TKNLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 166 t~~li~~~~~~~mk~gailIN~aR 189 (333)
-...++.|+++..++.++.
T Consensus 244 -----~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 244 -----FQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp -----HHHHHHHEEEEEEEEECCC
T ss_pred -----HHHHHHHhhcCCEEEEecc
Confidence 1445667788888887754
No 329
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.55 E-value=0.0038 Score=59.67 Aligned_cols=88 Identities=19% Similarity=0.226 Sum_probs=62.7
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc-C------hhhhccCCCEEEEecCCchhhHh
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL-G------LEDIWPLADYITVHTPLIPQTKN 168 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~-~------l~ell~~aDvV~l~~P~t~~t~~ 168 (333)
.|.+|.|+|.|.+|...++.++.+|.+|++.++.. ..+.++++|...+ + .+++....|+|+-++.....
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~--- 270 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHN--- 270 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHH---
Confidence 48899999999999999999999999999999765 4456667776421 1 22333467888877763211
Q ss_pred hccHHHHhccCCCcEEEEccC
Q psy6348 169 LINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 169 li~~~~~~~mk~gailIN~aR 189 (333)
-...++.|+++..++.++.
T Consensus 271 --~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 271 --LDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp --HHHHHTTEEEEEEEEECCC
T ss_pred --HHHHHHHhccCCEEEEecc
Confidence 1345667777777777753
No 330
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=96.54 E-value=0.029 Score=53.85 Aligned_cols=131 Identities=18% Similarity=0.190 Sum_probs=87.4
Q ss_pred hhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEec--ChHHHHHHHH
Q psy6348 39 TAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGL--GRIGREVALR 116 (333)
Q Consensus 39 ~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGl--G~IG~~vA~~ 116 (333)
+.+...+|+|.|.-|...-++- +++=++.+.++ +.+..+.|++|++||= +++..+.+..
T Consensus 141 ~la~~s~vPVING~g~~~HPtQ--aL~Dl~Ti~e~-----------------~~~~~l~gl~ia~vGD~~~~va~S~~~~ 201 (358)
T 4h31_A 141 ELGAFAGVPVWNGLTDEFHPTQ--ILADFLTMLEH-----------------SQGKALADIQFAYLGDARNNVGNSLMVG 201 (358)
T ss_dssp HHHHHSSSCEEESCCSSCCHHH--HHHHHHHHHHT-----------------TTTCCGGGCEEEEESCTTSHHHHHHHHH
T ss_pred HhhhhccCceECCCCcCCCchH--HHHHHHHHHHH-----------------hcCCCcCceEEEecCCCCcccchHHHHH
Confidence 3456688999997666555654 44444443321 2235688999999995 4899999999
Q ss_pred HhhCCCEEEEEcCCC---CHH-------HHHhcCccc---cChhhhccCCCEEEEecCCc----hhh---------Hhhc
Q psy6348 117 MQAFGMKVIGFDPMV---SVE-------DAAKLNIAS---LGLEDIWPLADYITVHTPLI----PQT---------KNLI 170 (333)
Q Consensus 117 l~~~G~~V~~~d~~~---~~~-------~a~~~gv~~---~~l~ell~~aDvV~l~~P~t----~~t---------~~li 170 (333)
+..+|++|....|.. ..+ .+.+.|..+ .+++|.++++|+|..-+=.. ++. .--+
T Consensus 202 ~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~s~~~~~~~~~~~~~~~~~y~v 281 (358)
T 4h31_A 202 AAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTDVWVSMGESPEAWDERVALMKPYQV 281 (358)
T ss_dssp HHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCB
T ss_pred HHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEEEEEEEcccCchhHHHHHHHHhCccc
Confidence 999999999998743 221 123345432 37999999999998533211 111 1125
Q ss_pred cHHHHhc-cCCCcEEEEcc
Q psy6348 171 NAEVLKK-CKKGVRVVNVA 188 (333)
Q Consensus 171 ~~~~~~~-mk~gailIN~a 188 (333)
+.+.++. .|++++|..|.
T Consensus 282 ~~~~l~~~ak~~~i~mH~L 300 (358)
T 4h31_A 282 NMNVLKQTGNPNVKFMHCL 300 (358)
T ss_dssp CHHHHHHTTCTTCEEEECS
T ss_pred CHHHHHhcCCCCcEEECCC
Confidence 7777775 47899999984
No 331
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.54 E-value=0.0059 Score=58.55 Aligned_cols=86 Identities=14% Similarity=0.220 Sum_probs=54.9
Q ss_pred CCCEEEEEe-cChHHHHHHHHHhhCC-CEEEEEcCCCCH--HHHHhc----C-----ccccChhhhccCCCEEEEecCCc
Q psy6348 97 YGKTLAVLG-LGRIGREVALRMQAFG-MKVIGFDPMVSV--EDAAKL----N-----IASLGLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 97 ~gktvGIIG-lG~IG~~vA~~l~~~G-~~V~~~d~~~~~--~~a~~~----g-----v~~~~l~ell~~aDvV~l~~P~t 163 (333)
...+|+|+| +|.||+.+++.|.... +++.+.....+. .....+ + +...+ ++.+.++|+|++|+|..
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~~ 93 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHG 93 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCTT
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCch
Confidence 346899999 8999999999998765 487777543321 111111 1 11113 55667899999999843
Q ss_pred hhhHhhccHHHHhccCCCcEEEEccC
Q psy6348 164 PQTKNLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 164 ~~t~~li~~~~~~~mk~gailIN~aR 189 (333)
.. .+.....+.|+.+|+.+.
T Consensus 94 ~s------~~~a~~~~aG~~VId~sa 113 (359)
T 1xyg_A 94 TT------QEIIKELPTALKIVDLSA 113 (359)
T ss_dssp TH------HHHHHTSCTTCEEEECSS
T ss_pred hH------HHHHHHHhCCCEEEECCc
Confidence 22 222222277899999875
No 332
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=96.54 E-value=0.007 Score=59.31 Aligned_cols=112 Identities=24% Similarity=0.224 Sum_probs=66.7
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCCEEEE--------EcCCC-CHHHHHhc----Cc------------ccc-Ch
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGMKVIG--------FDPMV-SVEDAAKL----NI------------ASL-GL 146 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~--------~d~~~-~~~~a~~~----gv------------~~~-~l 146 (333)
|.++.|+++.|.|+|++|+.+|+.|..+|.+|++ |||.- +.+...++ |. +.+ +.
T Consensus 205 g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~ 284 (421)
T 1v9l_A 205 WGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNP 284 (421)
T ss_dssp HSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSST
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCc
Confidence 5578999999999999999999999999999984 33321 22222221 11 222 33
Q ss_pred hhhcc-CCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEec
Q psy6348 147 EDIWP-LADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALD 213 (333)
Q Consensus 147 ~ell~-~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalD 213 (333)
++++. .||+++-|. +.+.|+.+....++- .+++-.+-+.+ ..+ -.+.|.+..+. ++=|
T Consensus 285 ~~~~~~~~Dil~P~A-----~~~~I~~~~a~~l~a-k~V~EgAN~p~-t~~-a~~~l~~~Gi~-~~PD 343 (421)
T 1v9l_A 285 DAIFKLDVDIFVPAA-----IENVIRGDNAGLVKA-RLVVEGANGPT-TPE-AERILYERGVV-VVPD 343 (421)
T ss_dssp TGGGGCCCSEEEECS-----CSSCBCTTTTTTCCC-SEEECCSSSCB-CHH-HHHHHHTTTCE-EECH
T ss_pred hhhhcCCccEEEecC-----cCCccchhhHHHcCc-eEEEecCCCcC-CHH-HHHHHHHCCCE-EeCh
Confidence 44443 577777664 345566666555632 34555555554 333 23455555554 3433
No 333
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.54 E-value=0.011 Score=51.11 Aligned_cols=92 Identities=15% Similarity=0.129 Sum_probs=57.5
Q ss_pred CEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCCHHH-HHhcCcccc--Chh----hhccCCCEEEEecCCc--h--hh
Q psy6348 99 KTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVSVED-AAKLNIASL--GLE----DIWPLADYITVHTPLI--P--QT 166 (333)
Q Consensus 99 ktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-a~~~gv~~~--~l~----ell~~aDvV~l~~P~t--~--~t 166 (333)
++|.|.|. |.||+.+++.|.+.|++|++.++...... ....+++.+ ++. +.+..+|+|+.+.... + ..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~ 80 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRGY 80 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCTH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcchhh
Confidence 46899998 99999999999999999999998642211 111344332 222 5678999999887542 0 01
Q ss_pred Hhh-ccHHHHhccC-CCcEEEEccCC
Q psy6348 167 KNL-INAEVLKKCK-KGVRVVNVARG 190 (333)
Q Consensus 167 ~~l-i~~~~~~~mk-~gailIN~aRg 190 (333)
.++ .....++.|+ .|..+|+++..
T Consensus 81 ~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 81 LHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp HHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 111 1233444443 24667777553
No 334
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.53 E-value=0.0025 Score=60.09 Aligned_cols=87 Identities=20% Similarity=0.105 Sum_probs=59.3
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC-CHHHHHhcCcccc------Chhhhc------cCCCEEEEecCC
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV-SVEDAAKLNIASL------GLEDIW------PLADYITVHTPL 162 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~gv~~~------~l~ell------~~aDvV~l~~P~ 162 (333)
.|++|.|+|.|.+|...++.++.+|. +|++.++.. ..+.++++|...+ ++.+.+ ...|+|+-++..
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 78999999999999999999999999 999999865 2345566665321 111111 147777777653
Q ss_pred chhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 163 IPQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 163 t~~t~~li~~~~~~~mk~gailIN~a 188 (333)
.+. -...++.++++..++.++
T Consensus 247 ~~~-----~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 247 PKA-----LEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp HHH-----HHHHHHHEEEEEEEEECC
T ss_pred HHH-----HHHHHHHHhcCCEEEEEc
Confidence 211 134456677777777764
No 335
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.53 E-value=0.007 Score=58.41 Aligned_cols=89 Identities=22% Similarity=0.169 Sum_probs=62.8
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC-CHHHHHhcCcccc------Chh----hhc--cCCCEEEEecCC
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV-SVEDAAKLNIASL------GLE----DIW--PLADYITVHTPL 162 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~gv~~~------~l~----ell--~~aDvV~l~~P~ 162 (333)
.|.+|.|+|.|.+|...++.++.+|. +|++.|+.. ..+.++++|...+ ++. ++. ...|+|+-++..
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGV 292 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCC
Confidence 58899999999999999999999999 999999765 3456677886432 121 122 258999988874
Q ss_pred chhhHhhccHHHHhcc----CCCcEEEEccC
Q psy6348 163 IPQTKNLINAEVLKKC----KKGVRVVNVAR 189 (333)
Q Consensus 163 t~~t~~li~~~~~~~m----k~gailIN~aR 189 (333)
...+. ...++.+ +++..++.++-
T Consensus 293 ~~~~~----~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 293 PQLVW----PQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp HHHHH----HHHHHHHHHCSCCCCEEEECSC
T ss_pred cHHHH----HHHHHHHHhccCCCcEEEEeCC
Confidence 32222 2233334 88888888864
No 336
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=96.53 E-value=0.0062 Score=58.05 Aligned_cols=85 Identities=16% Similarity=0.106 Sum_probs=53.5
Q ss_pred CEEEEEe-cChHHHHHHHHHhhCC-CEEEEEcCCCCHH-HHHh--------cCccccChhhhccCCCEEEEecCCchhhH
Q psy6348 99 KTLAVLG-LGRIGREVALRMQAFG-MKVIGFDPMVSVE-DAAK--------LNIASLGLEDIWPLADYITVHTPLIPQTK 167 (333)
Q Consensus 99 ktvGIIG-lG~IG~~vA~~l~~~G-~~V~~~d~~~~~~-~a~~--------~gv~~~~l~ell~~aDvV~l~~P~t~~t~ 167 (333)
.+|||+| .|.||+.+.+.|.... +++.+.....+.. ...+ ......++++ +.++|+|++|+|.... +
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~~~s-~ 82 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPHGVF-A 82 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCTTHH-H
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCcHHH-H
Confidence 5899999 7999999999998654 4777654432211 1110 1112224444 5789999999995432 2
Q ss_pred hhccHHHHhccCCCcEEEEccC
Q psy6348 168 NLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 168 ~li~~~~~~~mk~gailIN~aR 189 (333)
... . ..++.|+.+|+.+-
T Consensus 83 ~~a-~---~~~~aG~~VId~Sa 100 (345)
T 2ozp_A 83 REF-D---RYSALAPVLVDLSA 100 (345)
T ss_dssp HTH-H---HHHTTCSEEEECSS
T ss_pred HHH-H---HHHHCCCEEEEcCc
Confidence 221 1 22467889999875
No 337
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=96.53 E-value=0.0034 Score=58.88 Aligned_cols=89 Identities=19% Similarity=0.241 Sum_probs=56.6
Q ss_pred EEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCCHHHH--Hh-------c--C--ccc-cChhhhccCCCEEEEecCCch
Q psy6348 100 TLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVSVEDA--AK-------L--N--IAS-LGLEDIWPLADYITVHTPLIP 164 (333)
Q Consensus 100 tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~a--~~-------~--g--v~~-~~l~ell~~aDvV~l~~P~t~ 164 (333)
||+|||.|.||..+|..+...|+ +|..||........ .+ . . +.. .+. +.+++||+|+++.+...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~~ 79 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIGR 79 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCCC
Confidence 58999999999999988876677 79999987532211 11 1 2 122 244 67999999999966432
Q ss_pred -----------hhHhhcc--HHHHhccCCCcEEEEccC
Q psy6348 165 -----------QTKNLIN--AEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 165 -----------~t~~li~--~~~~~~mk~gailIN~aR 189 (333)
.+..++. -+.+....|++++|+++-
T Consensus 80 k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (308)
T 2d4a_B 80 KPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN 117 (308)
T ss_dssp CSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 1111111 112223358999999854
No 338
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=96.52 E-value=0.0043 Score=60.83 Aligned_cols=66 Identities=17% Similarity=0.128 Sum_probs=48.0
Q ss_pred CEEEEEecChHHHHHHHHHhhC-CCEEE-EEcCCCCH-HHH-H---hcC---cc-cc----Chhhhcc--CCCEEEEecC
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF-GMKVI-GFDPMVSV-EDA-A---KLN---IA-SL----GLEDIWP--LADYITVHTP 161 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~-~~a-~---~~g---v~-~~----~l~ell~--~aDvV~l~~P 161 (333)
.+|||||+|.||+..+..+... |++|. ++|+.... +.. + +.| .. +. +++++++ +.|+|++++|
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 100 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSSP 100 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECCC
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcCC
Confidence 4899999999999999988875 67765 67886532 221 1 235 23 34 7999997 5899999999
Q ss_pred Cch
Q psy6348 162 LIP 164 (333)
Q Consensus 162 ~t~ 164 (333)
...
T Consensus 101 ~~~ 103 (444)
T 2ixa_A 101 WEW 103 (444)
T ss_dssp GGG
T ss_pred cHH
Confidence 543
No 339
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=96.50 E-value=0.0084 Score=56.46 Aligned_cols=127 Identities=19% Similarity=0.200 Sum_probs=83.0
Q ss_pred HhhC-CcEEEECCC-CCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEec---ChHHHHHHH
Q psy6348 41 ATRK-GVLVLNAPG-GNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGL---GRIGREVAL 115 (333)
Q Consensus 41 a~~~-gI~V~n~p~-~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGl---G~IG~~vA~ 115 (333)
|..- +|+|+|.-. ....++- +++=++.+.++ .| .+.|+||++||= |++..+++.
T Consensus 116 a~~~~~vPVINag~G~~~HPtQ--aLaDl~Ti~e~------------------~g-~l~gl~va~vGD~~~~rva~Sl~~ 174 (310)
T 3csu_A 116 TEFSGNVPVLNAGDGSNQHPTQ--TLLDLFTIQET------------------QG-RLDNLHVAMVGDLKYGRTVHSLTQ 174 (310)
T ss_dssp HHHCTTCCEEEEEETTSCCHHH--HHHHHHHHHHH------------------HS-CSSSCEEEEESCTTTCHHHHHHHH
T ss_pred HHhcCCCCEEcCccCCCCCchH--HHHHHHHHHHH------------------hC-CcCCcEEEEECCCCCCchHHHHHH
Confidence 4445 799999853 4555554 33334433331 11 378999999998 599999999
Q ss_pred HHhhC-CCEEEEEcCCC---CH---HHHHhcCccc---cChhhhccCCCEEEEecCCch-----hh-----HhhccHHHH
Q psy6348 116 RMQAF-GMKVIGFDPMV---SV---EDAAKLNIAS---LGLEDIWPLADYITVHTPLIP-----QT-----KNLINAEVL 175 (333)
Q Consensus 116 ~l~~~-G~~V~~~d~~~---~~---~~a~~~gv~~---~~l~ell~~aDvV~l~~P~t~-----~t-----~~li~~~~~ 175 (333)
.+..+ |++|....|.. .. +.+++.|..+ .+++|+++++|+|..-.=-.+ +. .-.++.+.+
T Consensus 175 ~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~y~v~~~ll 254 (310)
T 3csu_A 175 ALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDL 254 (310)
T ss_dssp HHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-----------------CCBCGGGG
T ss_pred HHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCccccccCHHHHHHHhhccCCCHHHH
Confidence 99999 99999988743 22 2233446542 379999999999987643111 00 123466667
Q ss_pred hccCCCcEEEEcc
Q psy6348 176 KKCKKGVRVVNVA 188 (333)
Q Consensus 176 ~~mk~gailIN~a 188 (333)
+.+|+++++..|.
T Consensus 255 ~~a~~~ai~mH~l 267 (310)
T 3csu_A 255 HNAKANMKVLHPL 267 (310)
T ss_dssp TTCCTTCEEECCS
T ss_pred hhcCCCCEEECCC
Confidence 7777777777773
No 340
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.49 E-value=0.0069 Score=49.25 Aligned_cols=98 Identities=19% Similarity=0.122 Sum_probs=69.6
Q ss_pred CEEEEEec----ChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccc-cChhhhccCCCEEEEecCCchhhHhhccHH
Q psy6348 99 KTLAVLGL----GRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIAS-LGLEDIWPLADYITVHTPLIPQTKNLINAE 173 (333)
Q Consensus 99 ktvGIIGl----G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~ 173 (333)
++++|||. ++.|..+.+.|+..|++|+..+|.... -.|... .++.++-. -|++++++| .+.+..++.+
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~----i~G~~~y~sl~dlp~-vDlavi~~p-~~~v~~~v~e- 77 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGE----VLGKTIINERPVIEG-VDTVTLYIN-PQNQLSEYNY- 77 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSE----ETTEECBCSCCCCTT-CCEEEECSC-HHHHGGGHHH-
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCc----CCCeeccCChHHCCC-CCEEEEEeC-HHHHHHHHHH-
Confidence 68999998 679999999999999999999996422 235543 37888877 999999999 3455555533
Q ss_pred HHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 174 VLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 174 ~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
..+ +...+++++. |- .++++.+..++..++
T Consensus 78 ~~~-~g~k~v~~~~--G~--~~~e~~~~a~~~Gir 107 (122)
T 3ff4_A 78 ILS-LKPKRVIFNP--GT--ENEELEEILSENGIE 107 (122)
T ss_dssp HHH-HCCSEEEECT--TC--CCHHHHHHHHHTTCE
T ss_pred HHh-cCCCEEEECC--CC--ChHHHHHHHHHcCCe
Confidence 322 3444666554 32 356777777777665
No 341
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=96.49 E-value=0.011 Score=57.42 Aligned_cols=92 Identities=18% Similarity=0.147 Sum_probs=67.7
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhccHHHHh-
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINAEVLK- 176 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~- 176 (333)
-.++-|+|.|.+|+.+++.++.+|++|+++|++... .+ .+-+..+|-++...| ...+.. +.
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~----------~~-~~~fp~a~~~~~~~p-----~~~~~~--~~~ 265 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVF----------AT-TARFPTADEVVVDWP-----HRYLAA--QAE 265 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTT----------SC-TTTCSSSSEEEESCH-----HHHHHH--HHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhh----------cc-cccCCCceEEEeCCh-----HHHHHh--hcc
Confidence 458999999999999999999999999999986521 11 223456765555444 111111 11
Q ss_pred --ccCCCcEEEEccCCcccchHhHHhhhhcCCc
Q psy6348 177 --KCKKGVRVVNVARGGIVDENALLDSLKCGHC 207 (333)
Q Consensus 177 --~mk~gailIN~aRg~~vd~~aL~~aL~~g~i 207 (333)
.+.+++.+|=+.++.-.|...|..+|+++..
T Consensus 266 ~~~~~~~t~vvvlTh~~~~D~~~L~~aL~~~~~ 298 (386)
T 2we8_A 266 AGAIDARTVVCVLTHDPKFDVPLLEVALRLPDI 298 (386)
T ss_dssp HTCCCTTCEEEECCCCHHHHHHHHHHHTTSSCC
T ss_pred ccCCCCCcEEEEEECChHhHHHHHHHHhcCCCC
Confidence 2678889999999999999999999998733
No 342
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.49 E-value=0.012 Score=55.90 Aligned_cols=88 Identities=23% Similarity=0.305 Sum_probs=62.6
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC-CHHHHHhcCccc-cC-------hhhhc-----cCCCEEEEecC
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV-SVEDAAKLNIAS-LG-------LEDIW-----PLADYITVHTP 161 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~gv~~-~~-------l~ell-----~~aDvV~l~~P 161 (333)
.|++|.|+|.|.+|...++.++.+|. +|++.++.. ..+.++++|... ++ +.+.+ ...|+|+-++.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 57899999999999999999999999 899999766 446667777642 12 22222 14788888775
Q ss_pred CchhhHhhccHHHHhccCCC-cEEEEccC
Q psy6348 162 LIPQTKNLINAEVLKKCKKG-VRVVNVAR 189 (333)
Q Consensus 162 ~t~~t~~li~~~~~~~mk~g-ailIN~aR 189 (333)
..+. -...+..++++ ..++.++-
T Consensus 272 ~~~~-----~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 272 NVGV-----MRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp CHHH-----HHHHHHTBCTTTCEEEECSC
T ss_pred CHHH-----HHHHHHHhhcCCcEEEEEcC
Confidence 3211 14556778887 77777753
No 343
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=96.48 E-value=0.0068 Score=56.60 Aligned_cols=113 Identities=16% Similarity=0.116 Sum_probs=65.6
Q ss_pred CEEEEEe-cChHHHHHHHHHhhCCC--EEEEEcC--CCCHHH--HHhc--------Ccccc-ChhhhccCCCEEEEecCC
Q psy6348 99 KTLAVLG-LGRIGREVALRMQAFGM--KVIGFDP--MVSVED--AAKL--------NIASL-GLEDIWPLADYITVHTPL 162 (333)
Q Consensus 99 ktvGIIG-lG~IG~~vA~~l~~~G~--~V~~~d~--~~~~~~--a~~~--------gv~~~-~l~ell~~aDvV~l~~P~ 162 (333)
.||+|+| .|.+|+.++..|...|. ++..+|. ...... +.++ .+... +..+.+++||+|+++...
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag~ 80 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGI 80 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCCC
Confidence 4899999 99999999999887665 7888998 431111 1111 01110 235679999999999763
Q ss_pred chh---hHh-h------ccH---HHHhccCCCcEEEEccCCcccchHhHHhh--hhcCCceEEE
Q psy6348 163 IPQ---TKN-L------INA---EVLKKCKKGVRVVNVARGGIVDENALLDS--LKCGHCGGAA 211 (333)
Q Consensus 163 t~~---t~~-l------i~~---~~~~~mk~gailIN~aRg~~vd~~aL~~a--L~~g~i~gaa 211 (333)
... ++. + +-+ +.+....+++++++.+-.--+....+.+. +...++.|.+
T Consensus 81 ~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv~~~~~~~~~~~~~p~~rviG~g 144 (303)
T 1o6z_A 81 PRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRHLYEAGDRSREQVIGFG 144 (303)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHHHHHHHHSSSCGGGEEECC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHcCCCHHHeeecc
Confidence 321 110 0 111 22233467899999754433333444343 4444666663
No 344
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.48 E-value=0.0014 Score=60.76 Aligned_cols=40 Identities=20% Similarity=0.348 Sum_probs=36.7
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS 132 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~ 132 (333)
..++.|+++.|||.|.+|...++.|...|.+|++++|...
T Consensus 8 ~~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 8 AHQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp EECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred EEEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 4578999999999999999999999999999999998654
No 345
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=96.47 E-value=0.0019 Score=61.17 Aligned_cols=66 Identities=12% Similarity=0.077 Sum_probs=47.2
Q ss_pred CEEEEEecChHHHHHHHHHhhC--------CCEEE-EEcCCCCH--HHHHhcCcc--ccChhhhcc--CCCEEEEecCCc
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF--------GMKVI-GFDPMVSV--EDAAKLNIA--SLGLEDIWP--LADYITVHTPLI 163 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~--------G~~V~-~~d~~~~~--~~a~~~gv~--~~~l~ell~--~aDvV~l~~P~t 163 (333)
-+|||||+|.||+..++.++.. +.+|. ++|+.... +.++++|+. +.+++++++ +.|+|++++|..
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~~ 86 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPGD 86 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCGG
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 3899999999999888776543 23554 56876522 344566764 348999986 489999999954
Q ss_pred h
Q psy6348 164 P 164 (333)
Q Consensus 164 ~ 164 (333)
.
T Consensus 87 ~ 87 (390)
T 4h3v_A 87 S 87 (390)
T ss_dssp G
T ss_pred H
Confidence 4
No 346
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=96.47 E-value=0.034 Score=52.17 Aligned_cols=126 Identities=21% Similarity=0.205 Sum_probs=83.3
Q ss_pred hHhhCCcEEEECC-CCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEec---ChHHHHHHH
Q psy6348 40 AATRKGVLVLNAP-GGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGL---GRIGREVAL 115 (333)
Q Consensus 40 aa~~~gI~V~n~p-~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGl---G~IG~~vA~ 115 (333)
.|.-.+|+|.|.- |....++- +++=++.+.++ .| .+.|+||++||= |++..+++.
T Consensus 113 lA~~~~vPVINag~g~~~HPtQ--~LaDl~Ti~e~------------------~g-~l~glkva~vGD~~~~rva~Sl~~ 171 (306)
T 4ekn_B 113 ASEYSQVPIINAGDGSNQHPTQ--TLLDLYTIMRE------------------IG-RIDGIKIAFVGDLKYGRTVHSLVY 171 (306)
T ss_dssp HHHHCSSCEEESCSSSSCCHHH--HHHHHHHHHHH------------------HS-CSTTCEEEEESCTTTCHHHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCcCcHH--HHHHHHHHHHH------------------hC-CcCCCEEEEEcCCCCCcHHHHHHH
Confidence 4556789999994 44555553 33333333221 11 378999999997 589999999
Q ss_pred HHhhC-CCEEEEEcCCC---CHH---HHHhcCccc---cChhhhccCCCEEEEecC------CchhhH-----hhccHHH
Q psy6348 116 RMQAF-GMKVIGFDPMV---SVE---DAAKLNIAS---LGLEDIWPLADYITVHTP------LIPQTK-----NLINAEV 174 (333)
Q Consensus 116 ~l~~~-G~~V~~~d~~~---~~~---~a~~~gv~~---~~l~ell~~aDvV~l~~P------~t~~t~-----~li~~~~ 174 (333)
.+..+ |++|....|.. +.+ .+++.|..+ .+++|+++++|+|..-.- ...+-. -.++.+.
T Consensus 172 ~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~~q~er~~~~~e~~~~~~~y~v~~~~ 251 (306)
T 4ekn_B 172 ALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREY 251 (306)
T ss_dssp HHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEECCCCGGGCCSHHHHHHHHHHHCBCHHH
T ss_pred HHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeCCcccccCCCHHHHHHhccCcEECHHH
Confidence 99999 99999998843 222 234556543 389999999999987531 111111 2246666
Q ss_pred HhccCCCcEEEEcc
Q psy6348 175 LKKCKKGVRVVNVA 188 (333)
Q Consensus 175 ~~~mk~gailIN~a 188 (333)
++. ++++|..|.
T Consensus 252 l~~--~~ai~mH~l 263 (306)
T 4ekn_B 252 VEG--KKFIIMHPL 263 (306)
T ss_dssp HTT--CCCEEECCS
T ss_pred HcC--CCCEEECCC
Confidence 665 778888773
No 347
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.47 E-value=0.0054 Score=55.40 Aligned_cols=93 Identities=15% Similarity=0.073 Sum_probs=60.7
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhcCcccc--Chhhh-ccCCCEEEEecCCch----hhHhh
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKLNIASL--GLEDI-WPLADYITVHTPLIP----QTKNL 169 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~gv~~~--~l~el-l~~aDvV~l~~P~t~----~t~~l 169 (333)
.++|.|.|.|.||+.+++.|.+.|++|++.++.... ......+++.+ ++.++ +.++|+|+.+..... .++.+
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~d~vi~~a~~~~~~~~~~~~l 84 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPSLDGVTHLLISTAPDSGGDPVLAAL 84 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCCCTTCCEEEECCCCBTTBCHHHHHH
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccccCCCCEEEECCCccccccHHHHHH
Confidence 379999999999999999999999999999987633 23334555433 32221 788999998876442 23334
Q ss_pred ccHHHHhcc-CCCcEEEEccCCcc
Q psy6348 170 INAEVLKKC-KKGVRVVNVARGGI 192 (333)
Q Consensus 170 i~~~~~~~m-k~gailIN~aRg~~ 192 (333)
+.. +... ..-..+|.+|...+
T Consensus 85 ~~a--~~~~~~~~~~~v~~Ss~~v 106 (286)
T 3ius_A 85 GDQ--IAARAAQFRWVGYLSTTAV 106 (286)
T ss_dssp HHH--HHHTGGGCSEEEEEEEGGG
T ss_pred HHH--HHhhcCCceEEEEeeccee
Confidence 322 2222 12246777776443
No 348
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=96.47 E-value=0.0027 Score=60.70 Aligned_cols=66 Identities=20% Similarity=0.320 Sum_probs=47.4
Q ss_pred cCCCEEEEEec-ChHHHHHHHHHhhCCC--EEEEEcCCCCHHHH-----Hhc-----Cccc-cChhhhccCCCEEEEecC
Q psy6348 96 LYGKTLAVLGL-GRIGREVALRMQAFGM--KVIGFDPMVSVEDA-----AKL-----NIAS-LGLEDIWPLADYITVHTP 161 (333)
Q Consensus 96 l~gktvGIIGl-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~a-----~~~-----gv~~-~~l~ell~~aDvV~l~~P 161 (333)
+.++||+|||. |.||+.+|..+..+|. +|..||........ .+. .+.. .++.+.+++||+|+++..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 34689999998 9999999988888774 89999985422111 111 1121 256788999999999863
No 349
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=96.46 E-value=0.0036 Score=58.78 Aligned_cols=87 Identities=10% Similarity=0.068 Sum_probs=61.4
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcccc--------Chhhh-ccCCCEEEEecCCchhhHh
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASL--------GLEDI-WPLADYITVHTPLIPQTKN 168 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~--------~l~el-l~~aDvV~l~~P~t~~t~~ 168 (333)
.+++.|+|+|++|+.+++.|...|. |++.|+.+......+.++... .++++ +++||.++++++.. ..+
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d--~~n 191 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESD--SET 191 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHHHHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSH--HHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhhHHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCcc--HHH
Confidence 5689999999999999999999999 999998764322444555432 24444 78899999999843 344
Q ss_pred hccHHHHhccCCCcEEEEc
Q psy6348 169 LINAEVLKKCKKGVRVVNV 187 (333)
Q Consensus 169 li~~~~~~~mk~gailIN~ 187 (333)
+.-....+.+.+...++--
T Consensus 192 ~~~~~~ar~~~~~~~iiar 210 (336)
T 1lnq_A 192 IHCILGIRKIDESVRIIAE 210 (336)
T ss_dssp HHHHHHHHTTCTTSEEEEE
T ss_pred HHHHHHHHHHCCCCeEEEE
Confidence 4445566667776555443
No 350
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=96.46 E-value=0.0047 Score=58.89 Aligned_cols=66 Identities=14% Similarity=-0.023 Sum_probs=48.5
Q ss_pred CCEEEEEecChHHH-HHHHHHhhCCCEEE-EEcCCCCH--HHHHhcCc-c-ccChhhhccC--CCEEEEecCCc
Q psy6348 98 GKTLAVLGLGRIGR-EVALRMQAFGMKVI-GFDPMVSV--EDAAKLNI-A-SLGLEDIWPL--ADYITVHTPLI 163 (333)
Q Consensus 98 gktvGIIGlG~IG~-~vA~~l~~~G~~V~-~~d~~~~~--~~a~~~gv-~-~~~l~ell~~--aDvV~l~~P~t 163 (333)
-.++||||+|.+|. .++..++.-+.++. ++|+.... +.+++.|. . +.++++++.+ .|+|++++|..
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~ 99 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSS 99 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHH
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 46899999999995 56777777889966 56876522 33455663 3 3489999975 89999999943
No 351
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.45 E-value=0.0028 Score=62.16 Aligned_cols=108 Identities=19% Similarity=0.199 Sum_probs=62.9
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCCEEEE-EcCCC-------------CHHHH----HhcC-------ccccChh
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGMKVIG-FDPMV-------------SVEDA----AKLN-------IASLGLE 147 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~-~d~~~-------------~~~~a----~~~g-------v~~~~l~ 147 (333)
|.++.|+++.|.|+|++|+.+|+.|..+|.+|++ .|.+. +.+.. .+.| .+.++.+
T Consensus 207 g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~~ 286 (421)
T 2yfq_A 207 GIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITDE 286 (421)
T ss_dssp TCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC-------------
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCcc
Confidence 5578999999999999999999999999999994 45541 11211 1112 1223334
Q ss_pred hhc-cCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 148 DIW-PLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 148 ell-~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
+++ .+||+++-|.+ .+.|+.+....+ ...+++-.+-+.+- .+ -.+.|++..+.
T Consensus 287 ~~~~~~~DIliP~A~-----~n~i~~~~A~~l-~ak~VvEgAN~P~t-~e-a~~il~~~GI~ 340 (421)
T 2yfq_A 287 EFWTKEYDIIVPAAL-----ENVITGERAKTI-NAKLVCEAANGPTT-PE-GDKVLTERGIN 340 (421)
T ss_dssp --------CEEECSC-----SSCSCHHHHTTC-CCSEEECCSSSCSC-HH-HHHHHHHHTCE
T ss_pred chhcCCccEEEEcCC-----cCcCCcccHHHc-CCeEEEeCCccccC-HH-HHHHHHHCCCE
Confidence 444 36888888754 456777777777 34566666666653 22 33445555443
No 352
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.45 E-value=0.0041 Score=56.52 Aligned_cols=91 Identities=22% Similarity=0.302 Sum_probs=63.2
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC-------------------CHHH-H----Hhc--Ccc--c-
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV-------------------SVED-A----AKL--NIA--S- 143 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-------------------~~~~-a----~~~--gv~--~- 143 (333)
..|.+++|.|||+|.+|+.+|+.|...|. ++..+|+.. .+.. + .+. +++ .
T Consensus 24 ~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 103 (251)
T 1zud_1 24 QKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL 103 (251)
T ss_dssp HHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 45889999999999999999999999998 788887642 1111 1 111 211 1
Q ss_pred ------cChhhhccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 144 ------LGLEDIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 144 ------~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~a 188 (333)
.+++++++++|+|+.++. +.+++..+++...+. +.-+|+.+
T Consensus 104 ~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~~---~~p~i~~~ 150 (251)
T 1zud_1 104 QQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVAL---NTPLITAS 150 (251)
T ss_dssp CSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHHT---TCCEEEEE
T ss_pred eccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHHh---CCCEEEEe
Confidence 124567888999999987 667888887776553 34466653
No 353
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.45 E-value=0.0027 Score=60.44 Aligned_cols=65 Identities=31% Similarity=0.333 Sum_probs=43.9
Q ss_pred CEEEEEecChHHHHHHHHHhh-CCCEEEEE-cCCCCH--HHHHhc------------------Cccc-cChhhhccCCCE
Q psy6348 99 KTLAVLGLGRIGREVALRMQA-FGMKVIGF-DPMVSV--EDAAKL------------------NIAS-LGLEDIWPLADY 155 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~-~G~~V~~~-d~~~~~--~~a~~~------------------gv~~-~~l~ell~~aDv 155 (333)
.+|||+|+|+||+.+++.+.. -++++.+. |+.... ..+... ++.. .+.++++.++|+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDv 81 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCE
Confidence 379999999999999998876 56787664 544321 122221 1111 145677789999
Q ss_pred EEEecCCc
Q psy6348 156 ITVHTPLI 163 (333)
Q Consensus 156 V~l~~P~t 163 (333)
|+.|+|..
T Consensus 82 V~~atp~~ 89 (337)
T 1cf2_P 82 VIDCTPEG 89 (337)
T ss_dssp EEECCSTT
T ss_pred EEECCCch
Confidence 99999953
No 354
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.43 E-value=0.016 Score=56.69 Aligned_cols=113 Identities=23% Similarity=0.364 Sum_probs=74.6
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCCEEEE-Ec-------CCC-CHHHHH----hcC-cc--ccChhhhc-cCCCE
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGMKVIG-FD-------PMV-SVEDAA----KLN-IA--SLGLEDIW-PLADY 155 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~-~d-------~~~-~~~~a~----~~g-v~--~~~l~ell-~~aDv 155 (333)
|.++.|+++.|.|+|++|+.+|+.|...|.+|++ .| |.- +.+... +.+ +. ..+-++++ ..||+
T Consensus 213 g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~~~~DV 292 (419)
T 3aoe_E 213 GLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFGLEAEV 292 (419)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGGSSCSE
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhccCceE
Confidence 4578999999999999999999999999999983 34 322 222221 222 21 12334443 47999
Q ss_pred EEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEecc
Q psy6348 156 ITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDV 214 (333)
Q Consensus 156 V~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV 214 (333)
++-|.. .+.|+.+....++- .+++..+-+.+- .+ -.+.|++..+. ++=|.
T Consensus 293 liP~A~-----~n~i~~~~A~~l~a-k~V~EgAN~p~t-~~-A~~~L~~~Gi~-~~PD~ 342 (419)
T 3aoe_E 293 LVLAAR-----EGALDGDRARQVQA-QAVVEVANFGLN-PE-AEAYLLGKGAL-VVPDL 342 (419)
T ss_dssp EEECSC-----TTCBCHHHHTTCCC-SEEEECSTTCBC-HH-HHHHHHHHTCE-EECHH
T ss_pred EEeccc-----ccccccchHhhCCc-eEEEECCCCcCC-HH-HHHHHHHCCCE-EECHH
Confidence 998853 56677887777753 477888877753 33 34566666664 44443
No 355
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.43 E-value=0.01 Score=58.25 Aligned_cols=113 Identities=21% Similarity=0.187 Sum_probs=75.1
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCCEEEE-EcCC-------C-CHHHHHhc----C------ccccChhhhc-cC
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGMKVIG-FDPM-------V-SVEDAAKL----N------IASLGLEDIW-PL 152 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~-~d~~-------~-~~~~a~~~----g------v~~~~l~ell-~~ 152 (333)
|.++.|+|+.|-|+|++|+..|+.|..+|.+|++ .|.+ - +.+...++ | .+.++-++++ .+
T Consensus 216 g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~~~ 295 (424)
T 3k92_A 216 GIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLEKD 295 (424)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHHSC
T ss_pred CCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCccceecc
Confidence 5679999999999999999999999999999864 3433 1 23332221 2 2233445544 46
Q ss_pred CCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEecc
Q psy6348 153 ADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDV 214 (333)
Q Consensus 153 aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV 214 (333)
||+++-|.. .+.|+.+....++ -.+++-.+-+.+ . .+..+.|++..|. ++=|.
T Consensus 296 ~DIliPcA~-----~n~I~~~~a~~l~-ak~V~EgAN~p~-t-~eA~~iL~~rGI~-~~PD~ 348 (424)
T 3k92_A 296 CDILVPAAI-----SNQITAKNAHNIQ-ASIVVERANGPT-T-IDATKILNERGVL-LVPDI 348 (424)
T ss_dssp CSEEEECSC-----SSCBCTTTGGGCC-CSEEECCSSSCB-C-HHHHHHHHHTTCE-EECHH
T ss_pred ccEEeecCc-----ccccChhhHhhcC-ceEEEcCCCCCC-C-HHHHHHHHHCCCE-EECch
Confidence 999987754 5678777777773 456666666764 3 3345667666664 45444
No 356
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.42 E-value=0.011 Score=56.15 Aligned_cols=87 Identities=24% Similarity=0.296 Sum_probs=62.7
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC-CHHHHHhcCcccc-C-------hhhhc-----cCCCEEEEecC
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV-SVEDAAKLNIASL-G-------LEDIW-----PLADYITVHTP 161 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~gv~~~-~-------l~ell-----~~aDvV~l~~P 161 (333)
.|++|.|+|.|.||...++.++.+|. +|++.++.. ..+.++++|...+ + +.+.+ ...|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 47899999999999999999999999 899999766 4466777886421 2 21212 15788888875
Q ss_pred CchhhHhhccHHHHhccCCC-cEEEEcc
Q psy6348 162 LIPQTKNLINAEVLKKCKKG-VRVVNVA 188 (333)
Q Consensus 162 ~t~~t~~li~~~~~~~mk~g-ailIN~a 188 (333)
.. .+ -...++.++++ ..++.++
T Consensus 271 ~~-~~----~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 271 RI-ET----MMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp CH-HH----HHHHHHTBCTTTCEEEECC
T ss_pred CH-HH----HHHHHHHHhcCCCEEEEEc
Confidence 31 11 14556778888 7888775
No 357
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.42 E-value=0.0014 Score=58.50 Aligned_cols=63 Identities=19% Similarity=0.202 Sum_probs=43.6
Q ss_pred CEEEEEecChHHHHHHHH--HhhCCCEEEEE-cCCCCHHHHHhcCcc---ccChhhhcc-CCCEEEEecCC
Q psy6348 99 KTLAVLGLGRIGREVALR--MQAFGMKVIGF-DPMVSVEDAAKLNIA---SLGLEDIWP-LADYITVHTPL 162 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~--l~~~G~~V~~~-d~~~~~~~a~~~gv~---~~~l~ell~-~aDvV~l~~P~ 162 (333)
++++|||+|.+|+.+++. ... |+++.++ |..+........|+. ..+++++++ +.|.|++++|.
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps 150 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPR 150 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCH
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCc
Confidence 589999999999999985 334 8887764 655432211112332 236888886 59999999994
No 358
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.41 E-value=0.0043 Score=54.88 Aligned_cols=94 Identities=18% Similarity=0.087 Sum_probs=59.0
Q ss_pred cCCCEEEEEe-cChHHHHHHHHHhhCC-CEEEEEcCCCCHHH-HHhcCccc--------cChhhhccCCCEEEEecCCch
Q psy6348 96 LYGKTLAVLG-LGRIGREVALRMQAFG-MKVIGFDPMVSVED-AAKLNIAS--------LGLEDIWPLADYITVHTPLIP 164 (333)
Q Consensus 96 l~gktvGIIG-lG~IG~~vA~~l~~~G-~~V~~~d~~~~~~~-a~~~gv~~--------~~l~ell~~aDvV~l~~P~t~ 164 (333)
...|++.|.| .|.||+.+++.|...| ++|+++++...... ....++.. .+++++++.+|+|+.+.....
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~ 100 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED 100 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc
Confidence 4468999999 5999999999999999 89999998652211 11112221 145677889999988776432
Q ss_pred hhHhhccHHHHhccCC--CcEEEEccCCc
Q psy6348 165 QTKNLINAEVLKKCKK--GVRVVNVARGG 191 (333)
Q Consensus 165 ~t~~li~~~~~~~mk~--gailIN~aRg~ 191 (333)
.. ...+..+..|++ ...||+++...
T Consensus 101 ~~--~~~~~~~~~~~~~~~~~iV~iSS~~ 127 (236)
T 3qvo_A 101 LD--IQANSVIAAMKACDVKRLIFVLSLG 127 (236)
T ss_dssp HH--HHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred hh--HHHHHHHHHHHHcCCCEEEEEecce
Confidence 21 112233344432 24677776644
No 359
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.41 E-value=0.012 Score=55.50 Aligned_cols=88 Identities=18% Similarity=0.192 Sum_probs=62.1
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCC-HHHHHhcCcccc-Ch-----hh----hc----cCCCEEEEec
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVS-VEDAAKLNIASL-GL-----ED----IW----PLADYITVHT 160 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~-~~~a~~~gv~~~-~l-----~e----ll----~~aDvV~l~~ 160 (333)
.|++|.|+|.|.+|...++.++.+|. +|++.++... .+.++++|...+ +. ++ +. ...|+|+-++
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 47899999999999999999999999 9999998653 356677776421 11 11 11 3578888887
Q ss_pred CCchhhHhhccHHHHhccCCCcEEEEccC
Q psy6348 161 PLIPQTKNLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 161 P~t~~t~~li~~~~~~~mk~gailIN~aR 189 (333)
..... -...++.++++..++.++-
T Consensus 251 g~~~~-----~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 251 GAEAS-----IQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp CCHHH-----HHHHHHHSCTTCEEEECSC
T ss_pred CChHH-----HHHHHHHhcCCCEEEEEec
Confidence 63211 1445677888888887753
No 360
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.40 E-value=0.0033 Score=56.11 Aligned_cols=66 Identities=15% Similarity=0.142 Sum_probs=45.6
Q ss_pred CCEEEEEecChHHHHHHHH--HhhCCCEEEEE-cCCCC-HHHH-HhcCcccc---ChhhhccC--CCEEEEecCCc
Q psy6348 98 GKTLAVLGLGRIGREVALR--MQAFGMKVIGF-DPMVS-VEDA-AKLNIASL---GLEDIWPL--ADYITVHTPLI 163 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~--l~~~G~~V~~~-d~~~~-~~~a-~~~gv~~~---~l~ell~~--aDvV~l~~P~t 163 (333)
.++++|+|.|++|+.+++. ....|+++.++ |..+. ..-. .-.|+... ++++++++ .|.+++++|..
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~ 159 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPST 159 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCGG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCch
Confidence 4689999999999999987 34578888764 66544 2111 12355433 57777764 99999999953
No 361
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.39 E-value=0.015 Score=55.17 Aligned_cols=87 Identities=24% Similarity=0.345 Sum_probs=61.5
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC-CHHHHHhcCccc-cC-------hhhhc-----cCCCEEEEecC
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV-SVEDAAKLNIAS-LG-------LEDIW-----PLADYITVHTP 161 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~gv~~-~~-------l~ell-----~~aDvV~l~~P 161 (333)
.|++|.|+|.|.+|...++.++.+|. +|++.++.. ..+.++++|... ++ +.+.+ ...|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 57899999999999999999999999 899999766 446667777642 12 21212 14788888776
Q ss_pred CchhhHhhccHHHHhccCCC-cEEEEcc
Q psy6348 162 LIPQTKNLINAEVLKKCKKG-VRVVNVA 188 (333)
Q Consensus 162 ~t~~t~~li~~~~~~~mk~g-ailIN~a 188 (333)
..+ + -...++.++++ ..++.++
T Consensus 271 ~~~-~----~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 271 RLD-T----MVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp CHH-H----HHHHHHHBCTTTCEEEECS
T ss_pred CHH-H----HHHHHHHhhcCCcEEEEec
Confidence 321 1 14456677887 7777764
No 362
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.37 E-value=0.0035 Score=58.80 Aligned_cols=87 Identities=15% Similarity=0.149 Sum_probs=60.0
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc------Chhhhc----cCCCEEEEecCCchh
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL------GLEDIW----PLADYITVHTPLIPQ 165 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~------~l~ell----~~aDvV~l~~P~t~~ 165 (333)
.|++|.|+|.|.+|...++.++.+|.+|++.++.. ..+.++++|...+ ++.+.+ ...|+++.++...+.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~~ 245 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKA 245 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHHH
Confidence 58899999999999999999999999999999865 3456677775421 121111 256777776642211
Q ss_pred hHhhccHHHHhccCCCcEEEEcc
Q psy6348 166 TKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 166 t~~li~~~~~~~mk~gailIN~a 188 (333)
-...+..++++..++.++
T Consensus 246 -----~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 246 -----FSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp -----HHHHHHHEEEEEEEEECS
T ss_pred -----HHHHHHHhccCCEEEEeC
Confidence 134556677777777764
No 363
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=96.36 E-value=0.0093 Score=58.88 Aligned_cols=115 Identities=23% Similarity=0.264 Sum_probs=68.7
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCCEEEE--------EcCCC--CHH---HH---Hh------------cCcccc
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGMKVIG--------FDPMV--SVE---DA---AK------------LNIASL 144 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~--------~d~~~--~~~---~a---~~------------~gv~~~ 144 (333)
|.++.|+++.|.|+|++|+.+|+.|...|.+|++ |||.- +.+ .. ++ ++.+.+
T Consensus 225 G~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~i 304 (449)
T 1bgv_A 225 NDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFF 304 (449)
T ss_dssp TCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEE
T ss_pred cCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEEe
Confidence 5678999999999999999999999999999986 34431 111 11 11 122333
Q ss_pred Chhhhc-cCCCEEEEecCCchhhHhhccHHHHhccC-CCcEEEEccCCcccchHhHHhhhhcC-CceEEEecc
Q psy6348 145 GLEDIW-PLADYITVHTPLIPQTKNLINAEVLKKCK-KGVRVVNVARGGIVDENALLDSLKCG-HCGGAALDV 214 (333)
Q Consensus 145 ~l~ell-~~aDvV~l~~P~t~~t~~li~~~~~~~mk-~gailIN~aRg~~vd~~aL~~aL~~g-~i~gaalDV 214 (333)
+-++++ ..||+++-|. +.+.|+.+....++ +|+.+|--+--.....++- +.|.+. .+. ++=|.
T Consensus 305 ~~~e~~~~~~Dil~P~A-----~~~~I~~~na~~l~a~g~kiV~EgAN~p~T~eA~-~~l~~~~Gi~-~~PD~ 370 (449)
T 1bgv_A 305 PGEKPWGQKVDIIMPCA-----TQNDVDLEQAKKIVANNVKYYIEVANMPTTNEAL-RFLMQQPNMV-VAPSK 370 (449)
T ss_dssp ETCCGGGSCCSEEECCS-----CTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHH-HHHHHCTTCE-EECHH
T ss_pred CchhhhcCCcceeeccc-----cccccchhhHHHHHhcCCeEEEeCCCCcCCHHHH-HHHHHcCCEE-EEChH
Confidence 323333 3688777664 35667666666665 3444444433333444443 555555 554 45444
No 364
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.34 E-value=0.0061 Score=53.05 Aligned_cols=64 Identities=13% Similarity=0.092 Sum_probs=47.0
Q ss_pred CEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccc--------cChhhhccCCCEEEEecCC
Q psy6348 99 KTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIAS--------LGLEDIWPLADYITVHTPL 162 (333)
Q Consensus 99 ktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~--------~~l~ell~~aDvV~l~~P~ 162 (333)
++|.|.|. |.||+.+++.|...|++|++.++..+.......+++. .+++++++++|+|+.+...
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNP 77 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence 68999995 9999999999999999999999865321111122221 1356788899999988754
No 365
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=96.33 E-value=0.0036 Score=58.37 Aligned_cols=87 Identities=15% Similarity=0.048 Sum_probs=66.7
Q ss_pred CCCEEEEEe-cChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcccc------C-hhhhccCCCEEEEecCCchhhHh
Q psy6348 97 YGKTLAVLG-LGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASL------G-LEDIWPLADYITVHTPLIPQTKN 168 (333)
Q Consensus 97 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~------~-l~ell~~aDvV~l~~P~t~~t~~ 168 (333)
.|++|.|+| .|.+|...++.++.+|.+|++.++....+.++++|...+ + +.+.+...|+++-++.. +
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~-~---- 226 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGG-D---- 226 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCH-H----
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCc-H----
Confidence 578999997 999999999999999999998875434556677786532 2 55566789999988762 1
Q ss_pred hccHHHHhccCCCcEEEEccC
Q psy6348 169 LINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 169 li~~~~~~~mk~gailIN~aR 189 (333)
.. ...++.++++..++.++.
T Consensus 227 ~~-~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 227 VG-IQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp HH-HHHGGGEEEEEEEEECCS
T ss_pred HH-HHHHHhccCCCEEEEeCC
Confidence 12 567788999999998853
No 366
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=96.32 E-value=0.0089 Score=59.60 Aligned_cols=113 Identities=12% Similarity=0.107 Sum_probs=70.2
Q ss_pred CCEEEEEecChH--HHHHHHHHh---hC-CCEEEEEcCCCCH-HH----HH----hcC----ccc-cChhhhccCCCEEE
Q psy6348 98 GKTLAVLGLGRI--GREVALRMQ---AF-GMKVIGFDPMVSV-ED----AA----KLN----IAS-LGLEDIWPLADYIT 157 (333)
Q Consensus 98 gktvGIIGlG~I--G~~vA~~l~---~~-G~~V~~~d~~~~~-~~----a~----~~g----v~~-~~l~ell~~aDvV~ 157 (333)
.++|+|||.|.| |.++|..+. ++ |.+|..||..... +. .. ..+ +.. .++++.+++||+|+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 469999999997 566666664 33 8899999986522 11 11 111 111 26778899999999
Q ss_pred EecCCc---------------------hhh----------------Hhhcc--HHHHhccCCCcEEEEccCCcccchHhH
Q psy6348 158 VHTPLI---------------------PQT----------------KNLIN--AEVLKKCKKGVRVVNVARGGIVDENAL 198 (333)
Q Consensus 158 l~~P~t---------------------~~t----------------~~li~--~~~~~~mk~gailIN~aRg~~vd~~aL 198 (333)
+++|.. .+| ..++. .+.+....|++++||++-.--+-..++
T Consensus 83 iaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~~~ 162 (480)
T 1obb_A 83 NTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLV 162 (480)
T ss_dssp ECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHH
T ss_pred ECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH
Confidence 999741 011 01110 123444568999999987665555666
Q ss_pred HhhhhcCCceEEE
Q psy6348 199 LDSLKCGHCGGAA 211 (333)
Q Consensus 199 ~~aL~~g~i~gaa 211 (333)
.+ +...++.|.+
T Consensus 163 ~k-~p~~rviG~c 174 (480)
T 1obb_A 163 TR-TVPIKAVGFC 174 (480)
T ss_dssp HH-HSCSEEEEEC
T ss_pred HH-CCCCcEEecC
Confidence 55 5555666653
No 367
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=96.30 E-value=0.039 Score=52.82 Aligned_cols=139 Identities=17% Similarity=0.119 Sum_probs=86.5
Q ss_pred hhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCccc---ccCCCccccCCCEEEEEecC-hHHHHHH
Q psy6348 39 TAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWD---RKLYTGTELYGKTLAVLGLG-RIGREVA 114 (333)
Q Consensus 39 ~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~---~~~~~g~~l~gktvGIIGlG-~IG~~vA 114 (333)
+.|...+|+|+|.-+....++- +++=++.+.+++. .+. ........+.|+||++||=+ ++..+++
T Consensus 137 ~lA~~s~vPVINag~d~~HPtQ--aLaDl~TI~E~~G---------~~~~~~~~~~~~~~l~glkva~vGD~~nva~Sl~ 205 (353)
T 3sds_A 137 NLAKHSSVPVINALCDTFHPLQ--AIADFLTIHESFA---------SQSATHGTHPSSLGLEGLKIAWVGDANNVLFDLA 205 (353)
T ss_dssp HHHHHCSSCEEEEECSSCCHHH--HHHHHHHHHHHTC-----------------CTTCCSCTTCEEEEESCCCHHHHHHH
T ss_pred HHHhhCCCCEEECCCCCCCcHH--HHHHHHHHHHHhC---------CCcccccccccccccCCCEEEEECCCchHHHHHH
Confidence 3456689999999654445543 3333444443321 110 00112345899999999975 5778888
Q ss_pred HHHhhCCCEEEEEcCCC---CHHH---HHh------cC--ccc-cChhhhccCCCEEEEec--CCchh--h--------H
Q psy6348 115 LRMQAFGMKVIGFDPMV---SVED---AAK------LN--IAS-LGLEDIWPLADYITVHT--PLIPQ--T--------K 167 (333)
Q Consensus 115 ~~l~~~G~~V~~~d~~~---~~~~---a~~------~g--v~~-~~l~ell~~aDvV~l~~--P~t~~--t--------~ 167 (333)
..+..+|++|....|.. ..+. +++ .| ++. .+++|+++++|+|..-+ +...+ . .
T Consensus 206 ~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvytd~w~smg~E~~~~~r~~~~~~ 285 (353)
T 3sds_A 206 IAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIVTDTWISMGQETEKIKRLEAFKD 285 (353)
T ss_dssp HHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEEECCC--------CHHHHHHTTT
T ss_pred HHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEEeCCccCCchhhHHHHHHHHhhC
Confidence 88899999999998753 2221 222 12 333 38999999999998643 21111 0 1
Q ss_pred hhccHHHHhc--cCCCcEEEEcc
Q psy6348 168 NLINAEVLKK--CKKGVRVVNVA 188 (333)
Q Consensus 168 ~li~~~~~~~--mk~gailIN~a 188 (333)
-.++.+.++. +|++++|..|.
T Consensus 286 y~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 286 FKVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp CCBCHHHHHHHTCCTTCEEEECS
T ss_pred ceecHHHHhhcccCCCcEEECCC
Confidence 2467888888 89999999884
No 368
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.30 E-value=0.014 Score=55.40 Aligned_cols=87 Identities=24% Similarity=0.361 Sum_probs=62.3
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC-CHHHHHhcCccc-cC-------hhhhcc-----CCCEEEEecC
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV-SVEDAAKLNIAS-LG-------LEDIWP-----LADYITVHTP 161 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~gv~~-~~-------l~ell~-----~aDvV~l~~P 161 (333)
.|++|.|+|.|.+|...++.++.+|. +|++.++.. ..+.++++|... ++ +.+.+. ..|+|+-++.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 57899999999999999999999999 899999766 446667777642 12 212221 4788888876
Q ss_pred CchhhHhhccHHHHhccCCC-cEEEEcc
Q psy6348 162 LIPQTKNLINAEVLKKCKKG-VRVVNVA 188 (333)
Q Consensus 162 ~t~~t~~li~~~~~~~mk~g-ailIN~a 188 (333)
..+ + -...++.++++ ..++.++
T Consensus 270 ~~~-~----~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 270 NVK-V----MRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp CHH-H----HHHHHHTBCTTTCEEEECS
T ss_pred cHH-H----HHHHHHhhccCCcEEEEEe
Confidence 321 1 14556778888 7888775
No 369
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=96.30 E-value=0.011 Score=56.19 Aligned_cols=95 Identities=11% Similarity=0.179 Sum_probs=60.3
Q ss_pred ccCCCEEEEEecChHHHHHHHHHhhCCC--EEEEEcCCCCHHHH--Hhc--Cc------cc--c-ChhhhccCCCEEEEe
Q psy6348 95 ELYGKTLAVLGLGRIGREVALRMQAFGM--KVIGFDPMVSVEDA--AKL--NI------AS--L-GLEDIWPLADYITVH 159 (333)
Q Consensus 95 ~l~gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~a--~~~--gv------~~--~-~l~ell~~aDvV~l~ 159 (333)
....++|+|||.|.||..+|..+...|. ++..||........ .++ .. .. . +.+ .+++||+|+++
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~ 94 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIIT 94 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEEC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEc
Confidence 3567899999999999999998887777 89999985422111 111 10 11 1 344 58999999998
Q ss_pred cCCc--h-hhH--------hhcc--HHHHhccCCCcEEEEccCC
Q psy6348 160 TPLI--P-QTK--------NLIN--AEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 160 ~P~t--~-~t~--------~li~--~~~~~~mk~gailIN~aRg 190 (333)
.... + .++ .++. .+.+....|++++++++-.
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNP 138 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNP 138 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCh
Confidence 6421 1 112 1111 1233445789999999854
No 370
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.29 E-value=0.018 Score=54.24 Aligned_cols=88 Identities=19% Similarity=0.138 Sum_probs=61.4
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc-C-------hhhh---c-----cCCCEEEEe
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL-G-------LEDI---W-----PLADYITVH 159 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~-~-------l~el---l-----~~aDvV~l~ 159 (333)
.|++|.|+|.|.+|...++.++.+|.+|++.++.. ..+.++++|...+ + .+++ . ...|+|+-+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 47899999999999999999999999999998765 3355667775321 1 1111 1 257888887
Q ss_pred cCCchhhHhhccHHHHhccCCCcEEEEccC
Q psy6348 160 TPLIPQTKNLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 160 ~P~t~~t~~li~~~~~~~mk~gailIN~aR 189 (333)
+.... + -...+..++++..++.++.
T Consensus 248 ~g~~~-~----~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 248 SGNEK-C----ITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp SCCHH-H----HHHHHHHSCTTCEEEECSC
T ss_pred CCCHH-H----HHHHHHHHhcCCEEEEEec
Confidence 76321 1 1445667788888887753
No 371
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.29 E-value=0.017 Score=54.97 Aligned_cols=87 Identities=23% Similarity=0.218 Sum_probs=61.2
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC-CHHHHHhcCcccc-Ch-------hhhc-----cCCCEEEEecC
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV-SVEDAAKLNIASL-GL-------EDIW-----PLADYITVHTP 161 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~gv~~~-~l-------~ell-----~~aDvV~l~~P 161 (333)
.|++|.|+|.|.||...++.++.+|. +|++.++.. ..+.++++|...+ +. .+.+ ...|+|+-++.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 57899999999999999999999999 899999866 4466677776421 21 1111 14788887775
Q ss_pred CchhhHhhccHHHHhccCCC-cEEEEcc
Q psy6348 162 LIPQTKNLINAEVLKKCKKG-VRVVNVA 188 (333)
Q Consensus 162 ~t~~t~~li~~~~~~~mk~g-ailIN~a 188 (333)
.. .+ -...++.++++ ..++.++
T Consensus 275 ~~-~~----~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 275 TA-QT----LKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp CH-HH----HHHHHHTBCTTTCEEEECC
T ss_pred CH-HH----HHHHHHHhhcCCCEEEEEC
Confidence 31 11 14556777877 7777764
No 372
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.29 E-value=0.0066 Score=52.86 Aligned_cols=64 Identities=14% Similarity=0.150 Sum_probs=45.1
Q ss_pred CEEEEEe-cChHHHHHHHHHh-hCCCEEEEEcCCCC-HHH-H--HhcCccc--------cChhhhccCCCEEEEecCC
Q psy6348 99 KTLAVLG-LGRIGREVALRMQ-AFGMKVIGFDPMVS-VED-A--AKLNIAS--------LGLEDIWPLADYITVHTPL 162 (333)
Q Consensus 99 ktvGIIG-lG~IG~~vA~~l~-~~G~~V~~~d~~~~-~~~-a--~~~gv~~--------~~l~ell~~aDvV~l~~P~ 162 (333)
|++.|.| .|.||+.+++.|. ..|++|++.++... ... . ...++.. .+++++++++|+|+.+...
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~ 83 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAME 83 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCC
Confidence 6799999 4999999999999 89999999998643 211 1 1112221 1345677888888887763
No 373
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.28 E-value=0.016 Score=54.91 Aligned_cols=109 Identities=17% Similarity=0.138 Sum_probs=68.7
Q ss_pred CEEEEEecChHHHHHHHHHhh---------CCCEEEE-EcCCCC------HH--HHHh--cCcccc--Chhhhcc--CCC
Q psy6348 99 KTLAVLGLGRIGREVALRMQA---------FGMKVIG-FDPMVS------VE--DAAK--LNIASL--GLEDIWP--LAD 154 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~---------~G~~V~~-~d~~~~------~~--~a~~--~gv~~~--~l~ell~--~aD 154 (333)
.++||||+|.||+.+++.+.. .+.+|.+ +|+... .. .... .+..+. ++++++. +.|
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iD 82 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYD 82 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCS
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCC
Confidence 379999999999999998875 4677766 465531 11 1111 121122 7888885 599
Q ss_pred EEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCccc-chHhHHhhhhcCCce
Q psy6348 155 YITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIV-DENALLDSLKCGHCG 208 (333)
Q Consensus 155 vV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~v-d~~aL~~aL~~g~i~ 208 (333)
+|+.++|....... .-......|+.|.-+|...-+.+. .-+.|.++.++....
T Consensus 83 vVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~ 136 (327)
T 3do5_A 83 VLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVR 136 (327)
T ss_dssp EEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCc
Confidence 99999996543222 223345668888888877554443 456777777666553
No 374
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.27 E-value=0.0049 Score=58.82 Aligned_cols=87 Identities=21% Similarity=0.163 Sum_probs=61.4
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC-CHHHHHhcCcccc------Chhhhcc--------CCCEEEEec
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV-SVEDAAKLNIASL------GLEDIWP--------LADYITVHT 160 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~gv~~~------~l~ell~--------~aDvV~l~~ 160 (333)
.|++|.|+|.|.+|...++.++.+|. +|++.++.. ..+.++++|+..+ ++.+.+. ..|+|+-++
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECC
Confidence 48899999999999999999999999 899998865 3455677776422 2222222 478888776
Q ss_pred CCchhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 161 PLIPQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 161 P~t~~t~~li~~~~~~~mk~gailIN~a 188 (333)
... .+ -...+..++++..++.++
T Consensus 262 G~~-~~----~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 262 GVA-ET----VKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp CCH-HH----HHHHHHHEEEEEEEEECS
T ss_pred CCH-HH----HHHHHHHhccCCEEEEEe
Confidence 521 11 144566778888887775
No 375
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=96.26 E-value=0.01 Score=59.03 Aligned_cols=113 Identities=12% Similarity=0.087 Sum_probs=70.0
Q ss_pred CCEEEEEecChH-HHHHHHHHhhC-----CCEEEEEcCCCCHHHH-----H----hcC----ccc-cChhhhccCCCEEE
Q psy6348 98 GKTLAVLGLGRI-GREVALRMQAF-----GMKVIGFDPMVSVEDA-----A----KLN----IAS-LGLEDIWPLADYIT 157 (333)
Q Consensus 98 gktvGIIGlG~I-G~~vA~~l~~~-----G~~V~~~d~~~~~~~a-----~----~~g----v~~-~~l~ell~~aDvV~ 157 (333)
.+||+|||.|.+ |.++|..|... +.+|..||+....... . ..+ +.. .++++.+++||+|+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VV 107 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 107 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEE
Confidence 459999999998 66677555444 6689999986522110 1 111 111 26778899999999
Q ss_pred EecCCch---hhH----------------------------hhcc--HHHHhccCCCcEEEEccCCcccchHhHHhhhhc
Q psy6348 158 VHTPLIP---QTK----------------------------NLIN--AEVLKKCKKGVRVVNVARGGIVDENALLDSLKC 204 (333)
Q Consensus 158 l~~P~t~---~t~----------------------------~li~--~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~ 204 (333)
+++|... .++ .++. .+.+....|++++||++-.--+-..++.+....
T Consensus 108 iaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~~k~~p~ 187 (472)
T 1u8x_X 108 AHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPN 187 (472)
T ss_dssp ECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHHSTT
T ss_pred EcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhCCC
Confidence 9998521 011 1110 123344568999999987665555555555444
Q ss_pred CCceEE
Q psy6348 205 GHCGGA 210 (333)
Q Consensus 205 g~i~ga 210 (333)
.++.|.
T Consensus 188 ~rViG~ 193 (472)
T 1u8x_X 188 SKILNI 193 (472)
T ss_dssp CCEEEC
T ss_pred CCEEEe
Confidence 466665
No 376
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=96.26 E-value=0.0055 Score=59.75 Aligned_cols=64 Identities=25% Similarity=0.344 Sum_probs=45.9
Q ss_pred ccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCc----ccc---ChhhhccCCCEEEE
Q psy6348 95 ELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNI----ASL---GLEDIWPLADYITV 158 (333)
Q Consensus 95 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv----~~~---~l~ell~~aDvV~l 158 (333)
-+.|+||+|+|-|.+|+.+++.++.+|++|+++|++.......-... .+. .+.++++++|+|+.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 46799999999999999999999999999999998763221111111 111 24455667888875
No 377
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=96.23 E-value=0.0051 Score=58.32 Aligned_cols=87 Identities=20% Similarity=0.228 Sum_probs=58.7
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHH-hcCcccc----C---hhhhccCCCEEEEecCCchhhH
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-EDAA-KLNIASL----G---LEDIWPLADYITVHTPLIPQTK 167 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~-~~gv~~~----~---l~ell~~aDvV~l~~P~t~~t~ 167 (333)
.|.+|.|+|.|.+|...++.++.+|.+|++.++.... +.++ ++|...+ + +.++....|+|+-++.....
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~~-- 257 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHA-- 257 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChHH--
Confidence 6889999999999999999999999999999987643 4445 6675321 1 12223356777766652211
Q ss_pred hhccHHHHhccCCCcEEEEcc
Q psy6348 168 NLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 168 ~li~~~~~~~mk~gailIN~a 188 (333)
-...++.++++..++.++
T Consensus 258 ---~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 258 ---LEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp ---SHHHHTTEEEEEEEEECS
T ss_pred ---HHHHHHHhccCCEEEEeC
Confidence 133455666766666664
No 378
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.23 E-value=0.0029 Score=54.43 Aligned_cols=35 Identities=11% Similarity=0.167 Sum_probs=31.8
Q ss_pred CCCEEEEEe-cChHHHHHHHHHhhCCCEEEEEcCCC
Q psy6348 97 YGKTLAVLG-LGRIGREVALRMQAFGMKVIGFDPMV 131 (333)
Q Consensus 97 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~ 131 (333)
.|+++.|+| .|.||+.+++.++..|.+|++.++..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~ 73 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD 73 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH
Confidence 578999999 69999999999999999999999854
No 379
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=96.22 E-value=0.0068 Score=57.01 Aligned_cols=85 Identities=16% Similarity=0.301 Sum_probs=54.8
Q ss_pred CEEEEEecChHHHHHHHHHhh--CCCEEE-EEcCCCC---HHHHHhcCccc--cChhhhcc-----CCCEEEEecCCchh
Q psy6348 99 KTLAVLGLGRIGREVALRMQA--FGMKVI-GFDPMVS---VEDAAKLNIAS--LGLEDIWP-----LADYITVHTPLIPQ 165 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~--~G~~V~-~~d~~~~---~~~a~~~gv~~--~~l~ell~-----~aDvV~l~~P~t~~ 165 (333)
.++||||+|.||+.+++.+.. -++++. ++|+... .+.+++.|+.. .+.+++++ +.|+|++++| +.
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp-~~- 82 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATS-AS- 82 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSC-HH-
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCC-hH-
Confidence 489999999999999998843 466654 4677653 24455677652 35677754 5899999999 22
Q ss_pred hHhhccHHHHhccCCCcEEEE
Q psy6348 166 TKNLINAEVLKKCKKGVRVVN 186 (333)
Q Consensus 166 t~~li~~~~~~~mk~gailIN 186 (333)
...-+....++ -++|..+++
T Consensus 83 ~h~~~a~~al~-a~~Gk~Vi~ 102 (312)
T 1nvm_B 83 AHVQNEALLRQ-AKPGIRLID 102 (312)
T ss_dssp HHHHHHHHHHH-HCTTCEEEE
T ss_pred HHHHHHHHHHH-hCCCCEEEE
Confidence 22222222222 233777777
No 380
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=96.21 E-value=0.0055 Score=56.50 Aligned_cols=85 Identities=18% Similarity=0.207 Sum_probs=57.8
Q ss_pred CCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc-Ch------hhhccCCCEEEEecCCchhhH
Q psy6348 97 YGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL-GL------EDIWPLADYITVHTPLIPQTK 167 (333)
Q Consensus 97 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~-~l------~ell~~aDvV~l~~P~t~~t~ 167 (333)
.|+++.|+|. |.+|...++.++.+|++|++.++.. ..+.++++|...+ +. .+.+...|+++- +.. +
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~-~--- 199 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG-K--- 199 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-T---
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-H---
Confidence 4789999998 9999999999999999999999865 3355566665321 21 122245777776 653 1
Q ss_pred hhccHHHHhccCCCcEEEEcc
Q psy6348 168 NLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 168 ~li~~~~~~~mk~gailIN~a 188 (333)
.-...++.|+++..++.++
T Consensus 200 --~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 200 --EVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp --THHHHHTTEEEEEEEEEC-
T ss_pred --HHHHHHHhhccCCEEEEEe
Confidence 1144556667776666663
No 381
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.21 E-value=0.0088 Score=57.25 Aligned_cols=93 Identities=12% Similarity=0.102 Sum_probs=57.4
Q ss_pred CEEEEEe-cChHHHHHHHHHhhCC------CEEEEEcCCCCH-HHHHh--------cCccccCh-hhhccCCCEEEEecC
Q psy6348 99 KTLAVLG-LGRIGREVALRMQAFG------MKVIGFDPMVSV-EDAAK--------LNIASLGL-EDIWPLADYITVHTP 161 (333)
Q Consensus 99 ktvGIIG-lG~IG~~vA~~l~~~G------~~V~~~d~~~~~-~~a~~--------~gv~~~~l-~ell~~aDvV~l~~P 161 (333)
.+|+|+| .|.+|+.+.+.|...+ .++..+.+..+. ..... ..+...++ .+.+.++|+|++|+|
T Consensus 10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~alg 89 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVLGGHDAVFLALP 89 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCHHHHTTCSEEEECCT
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCHHHhcCCCEEEECCC
Confidence 5899999 8999999999998776 477666422211 11110 11111122 233568999999998
Q ss_pred CchhhHhhccHHHHhccCCCcEEEEccCCcccchHh
Q psy6348 162 LIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENA 197 (333)
Q Consensus 162 ~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~a 197 (333)
... ..+..+.++.|+.+|+.+.---.+..+
T Consensus 90 ~~~------s~~~~~~~~~G~~vIDlSa~~R~~~~~ 119 (352)
T 2nqt_A 90 HGH------SAVLAQQLSPETLIIDCGADFRLTDAA 119 (352)
T ss_dssp TSC------CHHHHHHSCTTSEEEECSSTTTCSCHH
T ss_pred Ccc------hHHHHHHHhCCCEEEEECCCccCCcch
Confidence 542 344444446789999997654443333
No 382
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=96.20 E-value=0.009 Score=59.53 Aligned_cols=109 Identities=16% Similarity=0.134 Sum_probs=71.9
Q ss_pred CCEEEEEecChHHHH-HHHHHhhCCCEEEEEcCCCCH--HHHHhcCcccc--ChhhhccCCCEEEEe--cCC-chhhHh-
Q psy6348 98 GKTLAVLGLGRIGRE-VALRMQAFGMKVIGFDPMVSV--EDAAKLNIASL--GLEDIWPLADYITVH--TPL-IPQTKN- 168 (333)
Q Consensus 98 gktvGIIGlG~IG~~-vA~~l~~~G~~V~~~d~~~~~--~~a~~~gv~~~--~l~ell~~aDvV~l~--~P~-t~~t~~- 168 (333)
.|++-|||+|..|.+ +|+.|+..|++|.++|...+. +..++.|++.. .-.+.+.++|+|++. +|. +|....
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~Spgi~~~~p~~~~a 101 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISADNPEIVAA 101 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECTTSCTTCHHHHHH
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECCCCCCCCHHHHHH
Confidence 579999999999996 899999999999999986543 34556787653 223456789999986 442 222211
Q ss_pred ------hccH-HHHhc-cCCC-cEEEEccCCcccchHhHHhhhhcCC
Q psy6348 169 ------LINA-EVLKK-CKKG-VRVVNVARGGIVDENALLDSLKCGH 206 (333)
Q Consensus 169 ------li~~-~~~~~-mk~g-ailIN~aRg~~vd~~aL~~aL~~g~ 206 (333)
++++ +.+.. ++.. .+-|--+.|+--...-+...|+...
T Consensus 102 ~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 148 (494)
T 4hv4_A 102 REARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAG 148 (494)
T ss_dssp HHTTCCEEEHHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred HHCCCCEEcHHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcC
Confidence 2333 23333 4432 3445556787777777777776543
No 383
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=96.20 E-value=0.0091 Score=56.34 Aligned_cols=64 Identities=22% Similarity=0.246 Sum_probs=46.7
Q ss_pred CEEEEEe-cChHHHHHHHHHhhCC--CEEEEEcCCCCHHHH---HhcCc----cc----cChhhhccCCCEEEEecCC
Q psy6348 99 KTLAVLG-LGRIGREVALRMQAFG--MKVIGFDPMVSVEDA---AKLNI----AS----LGLEDIWPLADYITVHTPL 162 (333)
Q Consensus 99 ktvGIIG-lG~IG~~vA~~l~~~G--~~V~~~d~~~~~~~a---~~~gv----~~----~~l~ell~~aDvV~l~~P~ 162 (333)
+||+|+| .|.+|..++..|...| .+|..+|.......+ .+... .. .++.+.+++||+|+++.+.
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~ 86 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGV 86 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCc
Confidence 5899999 8999999999998878 789999975432222 11111 11 1456789999999999863
No 384
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=96.19 E-value=0.076 Score=50.89 Aligned_cols=128 Identities=16% Similarity=0.057 Sum_probs=86.0
Q ss_pred hhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCcc-ccCCCE--EEEEec---C--hHH
Q psy6348 39 TAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGT-ELYGKT--LAVLGL---G--RIG 110 (333)
Q Consensus 39 ~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~-~l~gkt--vGIIGl---G--~IG 110 (333)
+.|...+|+|+|.-.+. .++- +++=++.+.++ .|. .+.|+| |++||= | ++.
T Consensus 151 ~lA~~~~vPVINag~g~-HPtQ--aLaDl~TI~E~------------------~g~~~l~glkvvva~vGDl~~~~nrva 209 (359)
T 1zq6_A 151 SFAKYSPVPVINMETIT-HPCQ--ELAHALALQEH------------------FGTPDLRGKKYVLTWTYHPKPLNTAVA 209 (359)
T ss_dssp HHHHHCSSCEEESSSSC-CHHH--HHHHHHHHHHH------------------HTSSCCTTCEEEEEECCCSSCCCSHHH
T ss_pred HHHHhCCCCEEeCCCCC-CcHH--HHHHHHHHHHH------------------hCCCcccCCeeEEEEEecccccccchH
Confidence 34566889999997766 6654 33333433321 122 378999 999996 4 899
Q ss_pred HHHHHHHhhCCCEEEEEcCC-C---CHHH---H----HhcCc--cc-cChhhhccCCCEEEEecCCc-----h-----hh
Q psy6348 111 REVALRMQAFGMKVIGFDPM-V---SVED---A----AKLNI--AS-LGLEDIWPLADYITVHTPLI-----P-----QT 166 (333)
Q Consensus 111 ~~vA~~l~~~G~~V~~~d~~-~---~~~~---a----~~~gv--~~-~~l~ell~~aDvV~l~~P~t-----~-----~t 166 (333)
.+++..+..+|++|....|. . ..+. + ++.|. +. .+++|+++++|+|..-.=-. + +.
T Consensus 210 ~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvVyt~~w~se~~mg~~~~~~~~ 289 (359)
T 1zq6_A 210 NSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPI 289 (359)
T ss_dssp HHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCSEEEEECCCCGGGTTCCTTHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEECCccccccCCcchhhHHH
Confidence 99999999999999999886 2 2222 1 14443 33 38999999999998765211 1 00
Q ss_pred -----HhhccHHHHhccCCCcEEEEcc
Q psy6348 167 -----KNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 167 -----~~li~~~~~~~mk~gailIN~a 188 (333)
.-.++.+.++.+| +++|..|.
T Consensus 290 ~~~~~~y~vt~e~l~~a~-~ai~MHcL 315 (359)
T 1zq6_A 290 RDQYQHFIVDERKMALTN-NGVFSHCL 315 (359)
T ss_dssp HGGGGGGSBCHHHHHTSS-SCEEECCS
T ss_pred HHHhcCCCCCHHHHHhCC-CCEEECCC
Confidence 1235777788888 88888874
No 385
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=96.18 E-value=0.013 Score=56.14 Aligned_cols=86 Identities=22% Similarity=0.307 Sum_probs=54.3
Q ss_pred CEEEEEecChHHHHHHHHHhhC-CCEEEEEc-CCCCHHHH-H--hc----C-------------------cccc---Chh
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF-GMKVIGFD-PMVSVEDA-A--KL----N-------------------IASL---GLE 147 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~~d-~~~~~~~a-~--~~----g-------------------v~~~---~l~ 147 (333)
.+|||+|+|+||+.+.+.|... .++|.+.. |....+.. . +. | +... +.+
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 97 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDPA 97 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSCGG
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCChH
Confidence 4899999999999999998765 68887765 45444311 1 11 0 0111 334
Q ss_pred hhc---cCCCEEEEecCCchhhHhhccHHHHhccCCCc--EEEEccC
Q psy6348 148 DIW---PLADYITVHTPLIPQTKNLINAEVLKKCKKGV--RVVNVAR 189 (333)
Q Consensus 148 ell---~~aDvV~l~~P~t~~t~~li~~~~~~~mk~ga--ilIN~aR 189 (333)
++- .++|+|+.|+|.-.. + +..-+.++.|+ ++|+.+.
T Consensus 98 ~i~w~~~~vDvV~eatg~~~s-~----e~a~~~l~~GakkvVId~pa 139 (354)
T 3cps_A 98 EIPWGASGAQIVCESTGVFTT-E----EKASLHLKGGAKKVIISAPP 139 (354)
T ss_dssp GCCHHHHTCCEEEECSSSCCS-H----HHHGGGGTTTCSEEEESSCC
T ss_pred HCCcccCCCCEEEECCCchhh-H----HHHHHHHHcCCcEEEEeCCC
Confidence 432 579999999984322 1 22234567788 8888754
No 386
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=96.18 E-value=0.016 Score=56.66 Aligned_cols=98 Identities=18% Similarity=0.142 Sum_probs=66.5
Q ss_pred CcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEe-----cCh---HHHHHHHH
Q psy6348 45 GVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLG-----LGR---IGREVALR 116 (333)
Q Consensus 45 gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIG-----lG~---IG~~vA~~ 116 (333)
.++|+|.-+....++- +++=++.+.+++ |.+ ..+.|+||++|| +|. +..+++..
T Consensus 153 ~~PVINa~~~~~HPtQ--aLaDl~TI~E~~---------G~l-------~~l~Glkva~vgd~~~s~Gd~nnVa~Sli~~ 214 (418)
T 2yfk_A 153 RPTLVNLQCDIDHPTQ--AMADALHLIHEF---------GGI-------ENLKGKKVAMTWAYSPSYGKPLSVPQGIVGL 214 (418)
T ss_dssp CCEEEEEEESSCCHHH--HHHHHHHHHHHT---------TSS-------GGGTTCEEEEECCCCSSSCCCSHHHHHHHHH
T ss_pred CCeEEeCCCCccChHH--HHHHHHHHHHHh---------CCc-------cccCCCEEEEEeccccccCccchHHHHHHHH
Confidence 5679998665555654 444444443321 111 138899999998 454 99999999
Q ss_pred HhhCCCEEEEEcCCC---CHHH-------HHhcCc--cc-cChhhhccCCCEEEEec
Q psy6348 117 MQAFGMKVIGFDPMV---SVED-------AAKLNI--AS-LGLEDIWPLADYITVHT 160 (333)
Q Consensus 117 l~~~G~~V~~~d~~~---~~~~-------a~~~gv--~~-~~l~ell~~aDvV~l~~ 160 (333)
+..+|++|....|.. .++. +++.|. .. .+++|+++++|+|..-+
T Consensus 215 l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~d~~eav~~ADVVytd~ 271 (418)
T 2yfk_A 215 MTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTNSMAEAFKDADVVYPKS 271 (418)
T ss_dssp HGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEESCHHHHHTTCSEEEECC
T ss_pred HHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEEcc
Confidence 999999999998853 2221 223564 32 37999999999999853
No 387
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=96.15 E-value=0.004 Score=58.14 Aligned_cols=103 Identities=18% Similarity=0.252 Sum_probs=67.0
Q ss_pred CEEEEEec-ChHHHHHHHHHhhCCCE-EEEEcCCCCHHHHHhcCcccc-Chhhhcc--CCCEEEEecCCchhhHhhccHH
Q psy6348 99 KTLAVLGL-GRIGREVALRMQAFGMK-VIGFDPMVSVEDAAKLNIASL-GLEDIWP--LADYITVHTPLIPQTKNLINAE 173 (333)
Q Consensus 99 ktvGIIGl-G~IG~~vA~~l~~~G~~-V~~~d~~~~~~~a~~~gv~~~-~l~ell~--~aDvV~l~~P~t~~t~~li~~~ 173 (333)
.++.|+|. |++|+.+++.+...|++ |...+|....+ +-.|+... +++++.. ..|++++++|. +.+...+ ++
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~--~i~G~~vy~sl~el~~~~~~Dv~ii~vp~-~~~~~~v-~e 89 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQ--NVHGVPVFDTVKEAVKETDANASVIFVPA-PFAKDAV-FE 89 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTC--EETTEEEESSHHHHHHHHCCCEEEECCCH-HHHHHHH-HH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCc--eECCEeeeCCHHHHhhcCCCCEEEEccCH-HHHHHHH-HH
Confidence 35788899 99999999999988997 34567653211 12466544 7999988 89999999993 3333333 23
Q ss_pred HHhccCCCcE-EEEccCC-cccchHhHHhhhhcCCce
Q psy6348 174 VLKKCKKGVR-VVNVARG-GIVDENALLDSLKCGHCG 208 (333)
Q Consensus 174 ~~~~mk~gai-lIN~aRg-~~vd~~aL~~aL~~g~i~ 208 (333)
..+ .|.- +|..+.| ..-+++.|.++.++..+.
T Consensus 90 a~~---~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~ 123 (294)
T 2yv1_A 90 AID---AGIELIVVITEHIPVHDTMEFVNYAEDVGVK 123 (294)
T ss_dssp HHH---TTCSEEEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred HHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 332 3333 4545444 223456888888776554
No 388
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.11 E-value=0.0063 Score=57.29 Aligned_cols=86 Identities=21% Similarity=0.237 Sum_probs=57.3
Q ss_pred CCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc-----Chh----hhc--cCCCEEEEecCCc
Q psy6348 97 YGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL-----GLE----DIW--PLADYITVHTPLI 163 (333)
Q Consensus 97 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~-----~l~----ell--~~aDvV~l~~P~t 163 (333)
.|++|.|+|. |.||...++.++.+|.+|++.++.. ..+.++++|...+ ++. ++. ...|+++-++..
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~- 237 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGG- 237 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCch-
Confidence 5889999998 9999999999999999999999865 4455666665321 111 111 146777766652
Q ss_pred hhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 164 PQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 164 ~~t~~li~~~~~~~mk~gailIN~a 188 (333)
+ .-...+..++++..++.++
T Consensus 238 ~-----~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 238 P-----AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp ------CHHHHHHTEEEEEEEEEC-
T ss_pred h-----HHHHHHHhhcCCCEEEEEE
Confidence 1 1244556667776666664
No 389
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=96.10 E-value=0.037 Score=54.65 Aligned_cols=181 Identities=15% Similarity=0.084 Sum_probs=119.3
Q ss_pred CCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEecChHHHHHHHHHhhCCC-
Q psy6348 44 KGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGLGRIGREVALRMQAFGM- 122 (333)
Q Consensus 44 ~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~- 122 (333)
..|+|+|+. -..+|=-+++-+++.+|- .|..|...++.|.|.|..|..+|+.+...|.
T Consensus 186 ~~ipvFnDD---~qGTA~V~lAgllnAlki------------------~gk~l~d~riV~~GAGaAGigia~ll~~~G~~ 244 (487)
T 3nv9_A 186 CDIPVWHDD---QQGTASVTLAGLLNALKL------------------VKKDIHECRMVFIGAGSSNTTCLRLIVTAGAD 244 (487)
T ss_dssp CSSCEEETT---THHHHHHHHHHHHHHHHH------------------HTCCGGGCCEEEECCSHHHHHHHHHHHHTTCC
T ss_pred ccCCccccc---cchHHHHHHHHHHHHHHH------------------hCCChhhcEEEEECCCHHHHHHHHHHHHcCCC
Confidence 489999996 356777788889988772 3567888899999999999999999999999
Q ss_pred --EEEEEcCCC----CHHHH-------------HhcCc-cccChhhhccCCCEEEEecCCchhhHhhccHHHHhccCCCc
Q psy6348 123 --KVIGFDPMV----SVEDA-------------AKLNI-ASLGLEDIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGV 182 (333)
Q Consensus 123 --~V~~~d~~~----~~~~a-------------~~~gv-~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~ga 182 (333)
+++.+|+.- ..... +...- ...+|.|+++.+|+++=.- . . ..+.+.++.++.|.+..
T Consensus 245 ~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~adVlIG~S-~-~-~pg~ft~e~V~~Ma~~P 321 (487)
T 3nv9_A 245 PKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEACVGADVLISLS-T-P-GPGVVKAEWIKSMGEKP 321 (487)
T ss_dssp GGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHTTCSEEEECC-C-S-SCCCCCHHHHHTSCSSC
T ss_pred cccEEEEeccccccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHHhcCCEEEEec-c-c-CCCCCCHHHHHhhcCCC
Confidence 799998751 11111 11111 2247999999999766442 1 0 14789999999999999
Q ss_pred EEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcCCCcEEEccCCC---------CCcHHHHHHHHH
Q psy6348 183 RVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLG---------ASTKEAQIRVAV 253 (333)
Q Consensus 183 ilIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~~pnvi~TPHi~---------~~t~ea~~~~~~ 253 (333)
++.-.|.... |-.=.+|.+.|+.. .+.- -...| . +.-|+++-|-++ --|.+-....++
T Consensus 322 IIFaLSNPtp--Ei~pe~A~~~G~aI-vATG-rsd~P--n-------Q~NN~liFPGI~~Gal~~~A~~Itd~M~~AAA~ 388 (487)
T 3nv9_A 322 IVFCCANPVP--EIYPYEAKEAGAYI-VATG-RGDFP--N-------QVNNSVGFPGILKGALIVRARKITDNMAIAASR 388 (487)
T ss_dssp EEEECCSSSC--SSCHHHHHHTTCSE-EEES-CTTSS--S-------BCCGGGTHHHHHHHHHHTTCSSCCHHHHHHHHH
T ss_pred EEEECCCCCc--cCCHHHHHHhCCEE-EEEC-CCCCc--c-------cCcceeEcchhhHHHHHcCCcccCHHHHHHHHH
Confidence 9999987654 22222333356532 2211 01112 1 456788888664 245555555555
Q ss_pred HHHHHHHH
Q psy6348 254 EIAEQFIA 261 (333)
Q Consensus 254 ~~~~~i~~ 261 (333)
.+++.+..
T Consensus 389 ALA~~v~~ 396 (487)
T 3nv9_A 389 ALAEFAEK 396 (487)
T ss_dssp HHHHHHHH
T ss_pred HHHhhCCc
Confidence 55554443
No 390
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.10 E-value=0.013 Score=55.78 Aligned_cols=87 Identities=21% Similarity=0.345 Sum_probs=53.1
Q ss_pred CEEEEEecChHHHHHHHHHhh-CCCEEEEE-cCCCCHHHHH---hc----C-------------------ccc---cChh
Q psy6348 99 KTLAVLGLGRIGREVALRMQA-FGMKVIGF-DPMVSVEDAA---KL----N-------------------IAS---LGLE 147 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~-~G~~V~~~-d~~~~~~~a~---~~----g-------------------v~~---~~l~ 147 (333)
.+|||+|+|+||+.+++.+.. -+++|.+. |+....+... ++ | +.. .+++
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~~ 83 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS 83 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCHH
Confidence 489999999999999998764 56888766 4323333211 10 0 000 1455
Q ss_pred hh-c--cCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCC
Q psy6348 148 DI-W--PLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 148 el-l--~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg 190 (333)
++ + .++|+|+.|+|..... +..-+.++.|+..|.++-.
T Consensus 84 ~l~~~~~~vDvV~eatg~~~~~-----e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 84 KIKWGDAGAEYVVESTGVFTTM-----EKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp GCCTTTTTCCEEEECSSSCCSH-----HHHGGGGGGTCSEEEESSC
T ss_pred HCccccCCCCEEEECCCchhhH-----HHHHHHHhCCCeEEEeccC
Confidence 55 2 5799999999843221 2223446778666666544
No 391
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.06 E-value=0.0063 Score=57.81 Aligned_cols=86 Identities=19% Similarity=0.064 Sum_probs=56.1
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc-C-----hhh----hc--cCCCEEEEecCCc
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL-G-----LED----IW--PLADYITVHTPLI 163 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~-~-----l~e----ll--~~aDvV~l~~P~t 163 (333)
.|++|.|+|.|.||...++.++.+|.+|++.++.. ..+.++++|...+ + +.+ +. ...|+|+-++. .
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g-~ 267 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAG-G 267 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETT-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-h
Confidence 58899999999999999999999999999999865 3355666665321 1 111 11 14666666654 1
Q ss_pred hhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 164 PQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 164 ~~t~~li~~~~~~~mk~gailIN~a 188 (333)
+ .-...++.++++..++.++
T Consensus 268 ~-----~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 268 A-----GLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp S-----CHHHHHHHEEEEEEEEEEC
T ss_pred H-----HHHHHHHHhhcCCEEEEEe
Confidence 1 1133445566666666553
No 392
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.06 E-value=0.011 Score=56.35 Aligned_cols=29 Identities=28% Similarity=0.493 Sum_probs=24.8
Q ss_pred EEEEEecChHHHHHHHHHhhC-CCEEEEEc
Q psy6348 100 TLAVLGLGRIGREVALRMQAF-GMKVIGFD 128 (333)
Q Consensus 100 tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 128 (333)
+|||+|+|+||+.+++.+... +++|.+..
T Consensus 5 kVgI~G~GrIGr~l~R~l~~~p~vevvaI~ 34 (337)
T 3e5r_O 5 KIGINGFGRIGRLVARVALQSEDVELVAVN 34 (337)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEE
T ss_pred EEEEECcCHHHHHHHHHHhCCCCeEEEEEE
Confidence 899999999999999998765 67877654
No 393
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.04 E-value=0.012 Score=55.44 Aligned_cols=88 Identities=16% Similarity=0.083 Sum_probs=57.6
Q ss_pred CCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHhcCcccc-------Chhhhcc-----CCCEEEEecCC
Q psy6348 97 YGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVSV-EDAAKLNIASL-------GLEDIWP-----LADYITVHTPL 162 (333)
Q Consensus 97 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~gv~~~-------~l~ell~-----~aDvV~l~~P~ 162 (333)
.|+++.|+|. |.||..+++.++..|.+|++.++.... +.++++|.... ++.+.+. ..|+|+.++..
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 4789999999 899999999999999999999986533 44555564311 1222221 46777766542
Q ss_pred chhhHhhccHHHHhccCCCcEEEEccC
Q psy6348 163 IPQTKNLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 163 t~~t~~li~~~~~~~mk~gailIN~aR 189 (333)
.+ .-...+..|+++..+|+++.
T Consensus 249 ~~-----~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 249 EA-----AIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HH-----HHHHHTTSEEEEEEEEECCC
T ss_pred HH-----HHHHHHHHHhcCCEEEEEeC
Confidence 11 11344566666667776643
No 394
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.03 E-value=0.0059 Score=57.51 Aligned_cols=60 Identities=18% Similarity=0.262 Sum_probs=46.0
Q ss_pred CCEEEEEecChHHH-HHHHHHhhC-CCEEEE-EcCCCCHHHHHhcCccc-cChhhhccC---CCEEEEecCC
Q psy6348 98 GKTLAVLGLGRIGR-EVALRMQAF-GMKVIG-FDPMVSVEDAAKLNIAS-LGLEDIWPL---ADYITVHTPL 162 (333)
Q Consensus 98 gktvGIIGlG~IG~-~vA~~l~~~-G~~V~~-~d~~~~~~~a~~~gv~~-~~l~ell~~---aDvV~l~~P~ 162 (333)
-.++||||+|.||+ ..++.++.. +.+|.+ +|+... ..|+.. .+++++++. .|+|++++|.
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~-----~~g~~~~~~~~~ll~~~~~vD~V~i~tp~ 91 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGT-----VEGVNSYTTIEAMLDAEPSIDAVSLCMPP 91 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCC-----CTTSEEESSHHHHHHHCTTCCEEEECSCH
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChh-----hcCCCccCCHHHHHhCCCCCCEEEEeCCc
Confidence 35899999999998 688888775 678664 677643 246654 489999864 9999999993
No 395
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.02 E-value=0.022 Score=54.21 Aligned_cols=91 Identities=20% Similarity=0.207 Sum_probs=63.4
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC-------------------CH-HHH----Hhc--Cccc--c
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV-------------------SV-EDA----AKL--NIAS--L 144 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-------------------~~-~~a----~~~--gv~~--~ 144 (333)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|+.. .+ +.+ .+. +++. .
T Consensus 30 ~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~ 109 (340)
T 3rui_A 30 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 109 (340)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence 46899999999999999999999999997 677887632 11 111 111 1211 1
Q ss_pred ----------------------ChhhhccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 145 ----------------------GLEDIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 145 ----------------------~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~a 188 (333)
.++++++++|+|+.++- +.+++.++++.... .+..+|+.+
T Consensus 110 ~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD-n~~tR~lin~~c~~---~~~plI~aa 171 (340)
T 3rui_A 110 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNI---ENKTVINAA 171 (340)
T ss_dssp CCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS-STGGGHHHHHHHHH---TTCEEEEEE
T ss_pred eccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC-CHHHHHHHHHHHHH---cCCcEEEee
Confidence 13567889999998874 66788888776654 345677764
No 396
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=96.01 E-value=0.0087 Score=55.46 Aligned_cols=85 Identities=14% Similarity=0.103 Sum_probs=58.5
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcccc--ChhhhccCCCEEEEecCCchhhHhhccHHH
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASL--GLEDIWPLADYITVHTPLIPQTKNLINAEV 174 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~--~l~ell~~aDvV~l~~P~t~~t~~li~~~~ 174 (333)
.|++|.|+|.|.+|...++.++.+|.+|++.+.....+.++++|...+ +.+++-...|+++-++.. +.+ ...
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~d~~g~-~~~-----~~~ 215 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVVDLVSASLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNS-QNA-----AAL 215 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCHHHHHHHTEEEEESSGGGCCSCEEEEECC-------------TT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEChhhHHHHHHcCCCEEEcCHHHhCCCccEEEECCCc-hhH-----HHH
Confidence 588999999999999999999999999999993336677788886432 222333457777776652 111 334
Q ss_pred HhccCCCcEEEEc
Q psy6348 175 LKKCKKGVRVVNV 187 (333)
Q Consensus 175 ~~~mk~gailIN~ 187 (333)
++.++++..++.+
T Consensus 216 ~~~l~~~G~~v~~ 228 (315)
T 3goh_A 216 VPSLKANGHIICI 228 (315)
T ss_dssp GGGEEEEEEEEEE
T ss_pred HHHhcCCCEEEEE
Confidence 5667777777776
No 397
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=96.00 E-value=0.074 Score=51.68 Aligned_cols=97 Identities=19% Similarity=0.146 Sum_probs=65.2
Q ss_pred cEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEec-----C---hHHHHHHHHH
Q psy6348 46 VLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGL-----G---RIGREVALRM 117 (333)
Q Consensus 46 I~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGl-----G---~IG~~vA~~l 117 (333)
++|+|.-+....++- +++=++.+.+++ |.+ ..|.|+||+|+|- | ++..+++..+
T Consensus 157 ~PVINal~d~~HPtQ--aLaDl~TI~E~~---------G~~-------~~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~ 218 (399)
T 3q98_A 157 PALVNLQCDIDHPTQ--SMADLAWLREHF---------GSL-------ENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLM 218 (399)
T ss_dssp CEEEEEECSSCCHHH--HHHHHHHHHHHH---------SSS-------GGGTTCEEEEECCCCSSCCCCTHHHHHHHHHH
T ss_pred CcEEeCCCCCcCcHH--HHHHHHHHHHHh---------CCc-------cccCCCEEEEEEecccccCcchHHHHHHHHHH
Confidence 579999765555654 333333333221 111 2478999999973 4 7889999999
Q ss_pred hhCCCEEEEEcCCC---CHHH-------HHhcCccc---cChhhhccCCCEEEEec
Q psy6348 118 QAFGMKVIGFDPMV---SVED-------AAKLNIAS---LGLEDIWPLADYITVHT 160 (333)
Q Consensus 118 ~~~G~~V~~~d~~~---~~~~-------a~~~gv~~---~~l~ell~~aDvV~l~~ 160 (333)
..+|++|....|.. .++. +++.|..+ .+++|.++++|+|..-+
T Consensus 219 ~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~d~~eav~~aDvVytd~ 274 (399)
T 3q98_A 219 TRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYPKS 274 (399)
T ss_dssp GGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECC
T ss_pred HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhCCCCEEEecC
Confidence 99999999998852 2322 22446432 38999999999998754
No 398
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=96.00 E-value=0.093 Score=50.24 Aligned_cols=102 Identities=16% Similarity=0.125 Sum_probs=68.8
Q ss_pred hhHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCccccCCCEEEEEec-------ChHHH
Q psy6348 39 TAATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTGTELYGKTLAVLGL-------GRIGR 111 (333)
Q Consensus 39 ~aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g~~l~gktvGIIGl-------G~IG~ 111 (333)
+.|.-..|+|.|. |.+..++- +++=++.+.++ +...++.|++++++|. .++..
T Consensus 151 ~~a~~~~vPVIN~-g~~~HPtQ--aL~Dl~Ti~e~-----------------~G~~dl~g~kv~~~~~~~gd~~~~~Va~ 210 (359)
T 3kzn_A 151 SFAKYSPVPVINM-ETITHPCQ--ELAHALALQEH-----------------FGTPDLRGKKYVLTWTYHPKPLNTAVAN 210 (359)
T ss_dssp HHHHHCSSCEEES-SSSCCHHH--HHHHHHHHHHH-----------------HTSSCCTTCEEEEEECCCSSCCCSHHHH
T ss_pred HHHHhCCCcccCc-ccccCchH--HHHHHHHHHHH-----------------cCCccccCCeEEEEEeecCCccccchhh
Confidence 3456689999996 55555654 33334433321 1224688999999976 36889
Q ss_pred HHHHHHhhCCCEEEEEcCCC----CHH-------HHHhcCcc--c-cChhhhccCCCEEEEec
Q psy6348 112 EVALRMQAFGMKVIGFDPMV----SVE-------DAAKLNIA--S-LGLEDIWPLADYITVHT 160 (333)
Q Consensus 112 ~vA~~l~~~G~~V~~~d~~~----~~~-------~a~~~gv~--~-~~l~ell~~aDvV~l~~ 160 (333)
+....+..+|++|..+-|.+ ..+ .+.+.|.. . .+++++++++|+|..-.
T Consensus 211 S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDvvyt~r 273 (359)
T 3kzn_A 211 SALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKS 273 (359)
T ss_dssp HHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCSEEEEEC
T ss_pred hhHHHHHhccccEEEEecccccCCCHHHHHHHHHHHHhhCCCcccccCHHHHhcCCeEEEEEE
Confidence 99999999999999988742 211 12333432 2 37999999999998765
No 399
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.00 E-value=0.0046 Score=60.05 Aligned_cols=86 Identities=16% Similarity=0.139 Sum_probs=56.1
Q ss_pred CEEEEEecChHHHHHHHHHhhCC---CEEEEEcCCCCH--HHHHhc------Cccc--------cChhhhccC--CCEEE
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFG---MKVIGFDPMVSV--EDAAKL------NIAS--------LGLEDIWPL--ADYIT 157 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G---~~V~~~d~~~~~--~~a~~~------gv~~--------~~l~ell~~--aDvV~ 157 (333)
++++|+|.|.||+.+++.|...| .+|.++|+.... +.+.++ .+.. .++++++++ +|+|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 58999999999999999999888 499999986532 112221 1211 145677777 89999
Q ss_pred EecCCchhhHhhccHHHHhccCCCcEEEEccC
Q psy6348 158 VHTPLIPQTKNLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 158 l~~P~t~~t~~li~~~~~~~mk~gailIN~aR 189 (333)
.++|.... ..++ + ..++.|..+++++-
T Consensus 82 n~ag~~~~-~~v~-~---a~l~~g~~vvD~a~ 108 (405)
T 4ina_A 82 NIALPYQD-LTIM-E---ACLRTGVPYLDTAN 108 (405)
T ss_dssp ECSCGGGH-HHHH-H---HHHHHTCCEEESSC
T ss_pred ECCCcccC-hHHH-H---HHHHhCCCEEEecC
Confidence 99884321 1121 2 22345666777644
No 400
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.99 E-value=0.014 Score=57.60 Aligned_cols=114 Identities=20% Similarity=0.115 Sum_probs=67.6
Q ss_pred ccccCCCEEEEEecChHHHHHHHHHhhCCCEEE-EEc-------CCC-CHHHHH------hc-------------Ccccc
Q psy6348 93 GTELYGKTLAVLGLGRIGREVALRMQAFGMKVI-GFD-------PMV-SVEDAA------KL-------------NIASL 144 (333)
Q Consensus 93 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~-~~d-------~~~-~~~~a~------~~-------------gv~~~ 144 (333)
|.++.|+|+.|-|+|++|+..|+.|...|.+|+ +.| |.- +.+... +. +.+++
T Consensus 234 g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v 313 (456)
T 3r3j_A 234 NDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYF 313 (456)
T ss_dssp TCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEE
T ss_pred CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEe
Confidence 567999999999999999999999999999986 344 322 222211 10 12223
Q ss_pred Chhhhc-cCCCEEEEecCCchhhHhhccHHHHhccC--CCcEEEEccCCcccchHhHHhhhhcCCceEEEecc
Q psy6348 145 GLEDIW-PLADYITVHTPLIPQTKNLINAEVLKKCK--KGVRVVNVARGGIVDENALLDSLKCGHCGGAALDV 214 (333)
Q Consensus 145 ~l~ell-~~aDvV~l~~P~t~~t~~li~~~~~~~mk--~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV 214 (333)
+-++++ .+||+++-|. +.+.|+.+....++ +=.+++-.|-+.+ ..++ .+.|.+..|. ++=|.
T Consensus 314 ~~~~i~~~~~DI~iPcA-----~~~~I~~~na~~l~~~~ak~V~EgAN~p~-T~eA-~~iL~~rGI~-~~PD~ 378 (456)
T 3r3j_A 314 ENQKPWNIPCDIAFPCA-----TQNEINENDADLFIQNKCKMIVEGANMPT-HIKA-LHKLKQNNII-LCPSK 378 (456)
T ss_dssp CSCCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHHTCCEEECCSSSCB-CTTH-HHHHHTTTCE-EECHH
T ss_pred CCccccccCccEEEeCC-----CccchhhHHHHHHHhcCCeEEEecCCCCC-CHHH-HHHHHHCCCE-EeChH
Confidence 334433 3588777663 35667777666652 1234455555553 3322 3556555553 34443
No 401
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.98 E-value=0.024 Score=49.72 Aligned_cols=68 Identities=18% Similarity=0.144 Sum_probs=49.8
Q ss_pred cCCCEEEEEe-cChHHHHHHHHHhhCCC--EEEEEcCCCCH-HHHHhcCcc--------ccChhhhccCCCEEEEecCCc
Q psy6348 96 LYGKTLAVLG-LGRIGREVALRMQAFGM--KVIGFDPMVSV-EDAAKLNIA--------SLGLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 96 l~gktvGIIG-lG~IG~~vA~~l~~~G~--~V~~~d~~~~~-~~a~~~gv~--------~~~l~ell~~aDvV~l~~P~t 163 (333)
+.+|++.|.| .|.||+.+++.|...|+ +|++.++.... +.....++. ..+++++++..|+|+.+....
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 5689999999 59999999999999999 99999886532 111111221 124667788999999987654
No 402
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.96 E-value=0.026 Score=52.55 Aligned_cols=65 Identities=17% Similarity=0.053 Sum_probs=46.5
Q ss_pred CCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCC--CHHHH------HhcCcccc--------Chhhhcc--CCCEEE
Q psy6348 97 YGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMV--SVEDA------AKLNIASL--------GLEDIWP--LADYIT 157 (333)
Q Consensus 97 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~--~~~~a------~~~gv~~~--------~l~ell~--~aDvV~ 157 (333)
..++|.|.|. |.+|+.+++.|...|++|++.++.. ..+.. ...+++.+ ++.++++ ++|+|+
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 88 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVV 88 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence 4679999998 9999999999999999999999865 22222 12344321 3456677 888887
Q ss_pred EecC
Q psy6348 158 VHTP 161 (333)
Q Consensus 158 l~~P 161 (333)
.+..
T Consensus 89 ~~a~ 92 (346)
T 3i6i_A 89 STVG 92 (346)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 7765
No 403
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.96 E-value=0.0081 Score=56.47 Aligned_cols=87 Identities=11% Similarity=0.049 Sum_probs=55.8
Q ss_pred CCCEEEEEecChHHHHHHHHHhhC--CCEEEEEcCCC-CHHHHHhcCccc-cChh-------hhc--cCCCEEEEecCCc
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAF--GMKVIGFDPMV-SVEDAAKLNIAS-LGLE-------DIW--PLADYITVHTPLI 163 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~-~~~~a~~~gv~~-~~l~-------ell--~~aDvV~l~~P~t 163 (333)
.|++|.|+|.|.+|...++.++.+ |.+|++.+++. ..+.++++|... ++.. ++- ...|+|+-++...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~ 249 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTE 249 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCCh
Confidence 689999999999999999999999 99999999865 334556666532 1211 111 1456666665421
Q ss_pred hhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 164 PQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 164 ~~t~~li~~~~~~~mk~gailIN~a 188 (333)
.. -...++.++++..++.++
T Consensus 250 ~~-----~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 250 ET-----TYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp HH-----HHHHHHHEEEEEEEEECC
T ss_pred HH-----HHHHHHHhhcCCEEEEeC
Confidence 11 133445556665665553
No 404
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.95 E-value=0.013 Score=55.97 Aligned_cols=87 Identities=26% Similarity=0.379 Sum_probs=61.1
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC-CHHHHHhcCcccc-Ch-------hhhc-----cCCCEEEEecC
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV-SVEDAAKLNIASL-GL-------EDIW-----PLADYITVHTP 161 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~gv~~~-~l-------~ell-----~~aDvV~l~~P 161 (333)
.|.+|.|+|.|.+|...++.++.+|. +|++.|+.. ..+.++++|...+ +. .+.+ ...|+|+-++.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 58899999999999999999999999 899999776 4466777786431 22 1111 14788887776
Q ss_pred CchhhHhhccHHHHhccCCC-cEEEEcc
Q psy6348 162 LIPQTKNLINAEVLKKCKKG-VRVVNVA 188 (333)
Q Consensus 162 ~t~~t~~li~~~~~~~mk~g-ailIN~a 188 (333)
.. .+ -...+..++++ ..++.++
T Consensus 273 ~~-~~----~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 273 NV-SV----MRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp CH-HH----HHHHHHTBCTTTCEEEECS
T ss_pred CH-HH----HHHHHHHhhccCCEEEEEc
Confidence 31 11 14456677775 7777764
No 405
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=95.94 E-value=0.018 Score=55.30 Aligned_cols=138 Identities=21% Similarity=0.217 Sum_probs=87.6
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEecCCchhhHhhccHHHHhc
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVHTPLIPQTKNLINAEVLKK 177 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~ 177 (333)
-.++-|+|.|.+|+++++.++.+|++|+++|++.... + .+-+..+|-++..-| .+.+..
T Consensus 199 ~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~----------~-~~~fp~a~~v~~~~p----------~~~~~~ 257 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQC----------E-KHFFPDADEIIVDFP----------ADFLRK 257 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGG----------C-GGGCTTCSEEEESCH----------HHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCcccc----------c-cccCCCceEEecCCH----------HHHHhh
Confidence 3579999999999999999999999999999964221 1 122456675554433 122233
Q ss_pred --cCCCcEEEEccCCcccchHhHHhhhhcCCceEEEeccCCCCCCCCccchhhcC---CCcEEEcc---CCCCCcHHHHH
Q psy6348 178 --CKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALDVFCEEPPKSEQTFELIK---HPKVIVTP---HLGASTKEAQI 249 (333)
Q Consensus 178 --mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalDV~~~EP~~~~~~~~L~~---~pnvi~TP---Hi~~~t~ea~~ 249 (333)
+.+++.+|=+.++.-.|...|..+|++. ....++=- .- . ....|++ .+.=+-+| -||+-|.+.
T Consensus 258 ~~~~~~t~vvv~TH~h~~D~~~L~~aL~~~-~~YiG~iG--Sr--~--R~~rl~~~g~~~~ri~~PIGL~Iga~tP~E-- 328 (362)
T 3on5_A 258 FLIRPDDFVLIMTHHFQKDQEILHFLLEKE-LRYIGILG--SK--E--RTRRLLQNRKPPDHLYSPVGLSIDAQGPEE-- 328 (362)
T ss_dssp SCCCTTCEEEECCSCHHHHHHHHHHHSSSC-CSEEEESS--CH--H--HHHHHHTSCCCCTTEESSCSCCSCCCSHHH--
T ss_pred cCCCCCeEEEEEeCCchhhHHHHHHHhcCC-CCEEEEeC--CH--H--HHHHHHhcCCcHhheECCCCCCCCCCCHHH--
Confidence 5678888888899889999999888773 33333310 00 0 0000110 01114555 467888855
Q ss_pred HHHHHHHHHHHHhHcCC
Q psy6348 250 RVAVEIAEQFIALANTN 266 (333)
Q Consensus 250 ~~~~~~~~~i~~~~~~~ 266 (333)
++..++.+|.....++
T Consensus 329 -IAvSI~AEiia~~~~~ 344 (362)
T 3on5_A 329 -IAISIVAQLIQLIRSR 344 (362)
T ss_dssp -HHHHHHHHHHHHHHHS
T ss_pred -HHHHHHHHHHHHHhCC
Confidence 5788888888855553
No 406
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=95.93 E-value=0.038 Score=52.28 Aligned_cols=125 Identities=8% Similarity=-0.044 Sum_probs=80.7
Q ss_pred hHhhCCcEEEECCCCCchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCc-cccCCCEEEE-----EecChHHHHH
Q psy6348 40 AATRKGVLVLNAPGGNFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTG-TELYGKTLAV-----LGLGRIGREV 113 (333)
Q Consensus 40 aa~~~gI~V~n~p~~n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g-~~l~gktvGI-----IGlG~IG~~v 113 (333)
.|.-.+|+|+|.-+....++- +++=++.+.++. | ..+. .+|++ ||=+++..++
T Consensus 130 lA~~~~vPVINa~~~~~HPtQ--aLaDl~Ti~e~~------------------g~~~l~-l~ia~a~~~~vGD~rva~Sl 188 (324)
T 1js1_X 130 FIQHSGRPVFSMEAATRHPLQ--SFADLITIEEYK------------------KTARPK-VVMTWAPHPRPLPQAVPNSF 188 (324)
T ss_dssp HHHHSSSCEEESSCSSCCHHH--HHHHHHHHHHHC------------------SSSSCE-EEEECCCCSSCCCSHHHHHH
T ss_pred HHhhCCCCEEECCCCCCCcHH--HHHHHHHHHHHc------------------CCCCee-EEEEEEcccccCCcchHHHH
Confidence 344568999998765555654 444444443321 2 1356 79999 9999999999
Q ss_pred HHHHhhCCCEEEEEcCCC-C-HHHHHhcCccc-cChhhhccCCCEEEEecCCc--h---------hhHhhccHHHHhccC
Q psy6348 114 ALRMQAFGMKVIGFDPMV-S-VEDAAKLNIAS-LGLEDIWPLADYITVHTPLI--P---------QTKNLINAEVLKKCK 179 (333)
Q Consensus 114 A~~l~~~G~~V~~~d~~~-~-~~~a~~~gv~~-~~l~ell~~aDvV~l~~P~t--~---------~t~~li~~~~~~~mk 179 (333)
+..+..+|++|....|.. . .+... .+++. .+++|+++++|+|..-.=.. . ...-.++.+.++.+|
T Consensus 189 ~~~~~~~G~~v~~~~P~~~~~~~~~~-~~~~~~~d~~eav~~aDvvy~~~w~s~g~~~~~~~~~r~~~y~vt~e~l~~a~ 267 (324)
T 1js1_X 189 AEWMNATDYEFVITHPEGYELDPKFV-GNARVEYDQMKAFEGADFIYAKNWAAYTGDNYGQILSTDRNWTVGDRQMAVTN 267 (324)
T ss_dssp HHHHHTSSSEEEEECCTTCCCCHHHH-TTCEEESCHHHHHTTCSEEEECCCCCCSTTCTTCCCCCCTTSSBCHHHHTTSS
T ss_pred HHHHHHCCCEEEEeCCcccCCChhhc-cceEEECCHHHHhCCCCEEEecCcccCCCccccchHHHhcCcccCHHHHHhcC
Confidence 999999999999998854 2 22221 24543 38999999999998843211 0 011234555555555
Q ss_pred CCcEEEEc
Q psy6348 180 KGVRVVNV 187 (333)
Q Consensus 180 ~gailIN~ 187 (333)
+++|..|
T Consensus 268 -~ai~MHc 274 (324)
T 1js1_X 268 -NAYFMHC 274 (324)
T ss_dssp -SCEEECC
T ss_pred -CcEEECC
Confidence 6666655
No 407
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=95.93 E-value=0.0099 Score=56.73 Aligned_cols=37 Identities=38% Similarity=0.552 Sum_probs=32.0
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEE-EcCCCCHHH
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIG-FDPMVSVED 135 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~-~d~~~~~~~ 135 (333)
.|+||.|||+||+.+++++..+|++|++ +||+.+.+.
T Consensus 8 ~kvgInGFGRIGrlv~R~~~~~~veivainDp~~d~~~ 45 (346)
T 3h9e_O 8 LTVGINGFGRIGRLVLRACMEKGVKVVAVNDPFIDPEY 45 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECTTCCHHH
T ss_pred eEEEEECCChHHHHHHHHHHhCCCEEEEEeCCCCChhH
Confidence 4899999999999999999999999888 788765543
No 408
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=95.93 E-value=0.019 Score=52.28 Aligned_cols=65 Identities=18% Similarity=0.167 Sum_probs=48.1
Q ss_pred CCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCC----HHHH------HhcCcccc--------ChhhhccCCCEEEE
Q psy6348 98 GKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVS----VEDA------AKLNIASL--------GLEDIWPLADYITV 158 (333)
Q Consensus 98 gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~----~~~a------~~~gv~~~--------~l~ell~~aDvV~l 158 (333)
.++|.|.|. |.+|+.+++.|.+.|++|++.+|..+ .+.. ...|++.+ ++.++++++|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 478999997 99999999999999999999988752 2221 12354322 35667888999888
Q ss_pred ecCC
Q psy6348 159 HTPL 162 (333)
Q Consensus 159 ~~P~ 162 (333)
+.+.
T Consensus 84 ~a~~ 87 (308)
T 1qyc_A 84 TVGS 87 (308)
T ss_dssp CCCG
T ss_pred CCcc
Confidence 7753
No 409
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.93 E-value=0.0079 Score=55.31 Aligned_cols=39 Identities=26% Similarity=0.344 Sum_probs=35.1
Q ss_pred ccccCCCEEEEEe-cChHHHHHHHHHhhCCCEEEEEcCCC
Q psy6348 93 GTELYGKTLAVLG-LGRIGREVALRMQAFGMKVIGFDPMV 131 (333)
Q Consensus 93 g~~l~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~ 131 (333)
+.++.||++.|+| .|.+|+.+++.|...|.+|+++++..
T Consensus 114 ~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 114 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp TSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 3457899999999 89999999999999999999999864
No 410
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=95.93 E-value=0.008 Score=55.54 Aligned_cols=87 Identities=23% Similarity=0.249 Sum_probs=56.1
Q ss_pred CEEEEEe-cChHHHHHHHHHhh-CCCEEEE-EcCCCCHHHHH--------hcCccc-cChhhhccCCCEEEEecCCchhh
Q psy6348 99 KTLAVLG-LGRIGREVALRMQA-FGMKVIG-FDPMVSVEDAA--------KLNIAS-LGLEDIWPLADYITVHTPLIPQT 166 (333)
Q Consensus 99 ktvGIIG-lG~IG~~vA~~l~~-~G~~V~~-~d~~~~~~~a~--------~~gv~~-~~l~ell~~aDvV~l~~P~t~~t 166 (333)
.+|+|+| +|+||+.+++.+.. -++++.+ +|+..+....+ ..|+.. .++++++.++|+|+-++|. +.+
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~p-~a~ 86 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTLP-EGT 86 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSCH-HHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCCH-HHH
Confidence 5899999 89999999988764 5788877 68754211110 114433 3789999999999998762 222
Q ss_pred HhhccHHHHhccCCCcEEEEccCC
Q psy6348 167 KNLINAEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 167 ~~li~~~~~~~mk~gailIN~aRg 190 (333)
... ....++.|.-+|-...|
T Consensus 87 ~~~----~~~al~~G~~vVigTTG 106 (272)
T 4f3y_A 87 LVH----LDAALRHDVKLVIGTTG 106 (272)
T ss_dssp HHH----HHHHHHHTCEEEECCCC
T ss_pred HHH----HHHHHHcCCCEEEECCC
Confidence 222 12224566667765555
No 411
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=95.92 E-value=0.017 Score=57.89 Aligned_cols=110 Identities=17% Similarity=0.179 Sum_probs=71.3
Q ss_pred cCCCEEEEEecChHHHH-HHHHHhhCCCEEEEEcCCCCH---HHHHhcCcccc---ChhhhccCCCEEEEe--cC-Cchh
Q psy6348 96 LYGKTLAVLGLGRIGRE-VALRMQAFGMKVIGFDPMVSV---EDAAKLNIASL---GLEDIWPLADYITVH--TP-LIPQ 165 (333)
Q Consensus 96 l~gktvGIIGlG~IG~~-vA~~l~~~G~~V~~~d~~~~~---~~a~~~gv~~~---~l~ell~~aDvV~l~--~P-~t~~ 165 (333)
..++++-|||.|.+|.+ +|+.|+..|++|.++|..... +..++.|++.. +.+++..++|+|+.. +| .+|.
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~Spgi~~~~p~ 96 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVGNAMKRGMDV 96 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEECTTCCTTSHH
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEECCCcCCCCHH
Confidence 35789999999999996 789999999999999986522 34566787654 345566789999985 44 3333
Q ss_pred hHh-------hccHH-HHhc--cCCC-cEEEEccCCcccchHhHHhhhhcC
Q psy6348 166 TKN-------LINAE-VLKK--CKKG-VRVVNVARGGIVDENALLDSLKCG 205 (333)
Q Consensus 166 t~~-------li~~~-~~~~--mk~g-ailIN~aRg~~vd~~aL~~aL~~g 205 (333)
... ++++. .+.. +++. .+-|--+.|+--...=+...|+..
T Consensus 97 l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~ 147 (524)
T 3hn7_A 97 IEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYA 147 (524)
T ss_dssp HHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHc
Confidence 221 33333 3333 3332 344544567766666666667654
No 412
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=95.90 E-value=0.036 Score=55.26 Aligned_cols=109 Identities=17% Similarity=0.174 Sum_probs=68.9
Q ss_pred ccCCCEEEEEecChHHHHHHHHHhhCCCEEEE--------EcCCC-CHHHHHh----cC-------ccccChhhhc-cCC
Q psy6348 95 ELYGKTLAVLGLGRIGREVALRMQAFGMKVIG--------FDPMV-SVEDAAK----LN-------IASLGLEDIW-PLA 153 (333)
Q Consensus 95 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~--------~d~~~-~~~~a~~----~g-------v~~~~l~ell-~~a 153 (333)
+|.|+|+.|-|+|++|+..|+.|..+|.+|++ |||.- +.+...+ .| .+..+ ++++ .+|
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~-~~il~~~~ 319 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYE-GSILEVDC 319 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEEC-SCGGGSCC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeec-cccccccc
Confidence 58999999999999999999999999999987 44432 3332221 12 11111 1333 468
Q ss_pred CEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCceEEEec
Q psy6348 154 DYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCGGAALD 213 (333)
Q Consensus 154 DvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gaalD 213 (333)
|+++-|. +.+.|+.+....++ =.+++-.|-+. ...++ .+.|.+..|. ++=|
T Consensus 320 DIliPcA-----~~n~I~~~na~~l~-akiV~EgAN~p-~T~eA-~~iL~~rGIl-~~PD 370 (501)
T 3mw9_A 320 DILIPAA-----SEKQLTKSNAPRVK-AKIIAEGANGP-TTPEA-DKIFLERNIM-VIPD 370 (501)
T ss_dssp SEEEECS-----SSCCBCTTTGGGCC-CSEEECCSSSC-BCHHH-HHHHHHTTCE-EECH
T ss_pred eEEeecc-----ccCccCHhHHHHcC-ceEEEeCCCCc-CCHHH-HHHHHHCCCE-EECh
Confidence 8888764 35777777777775 24555566665 34333 3556555553 3434
No 413
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=95.89 E-value=0.0096 Score=56.83 Aligned_cols=66 Identities=18% Similarity=0.192 Sum_probs=47.7
Q ss_pred CEEEEEe-cChHHHH-HH----HHHhhCC-CEE----------EEEcCCCCH--HHHHhcCcc--ccChhhhccC--CCE
Q psy6348 99 KTLAVLG-LGRIGRE-VA----LRMQAFG-MKV----------IGFDPMVSV--EDAAKLNIA--SLGLEDIWPL--ADY 155 (333)
Q Consensus 99 ktvGIIG-lG~IG~~-vA----~~l~~~G-~~V----------~~~d~~~~~--~~a~~~gv~--~~~l~ell~~--aDv 155 (333)
.+||||| +|.||+. .+ ..++..+ ..+ .++|+.... +.+++.|+. +.++++++++ .|+
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD~ 86 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDTM 86 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCCE
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCE
Confidence 4799999 9999998 66 6665443 332 378887633 344567874 3489999865 899
Q ss_pred EEEecCCch
Q psy6348 156 ITVHTPLIP 164 (333)
Q Consensus 156 V~l~~P~t~ 164 (333)
|++++|...
T Consensus 87 V~i~tp~~~ 95 (383)
T 3oqb_A 87 FFDAATTQA 95 (383)
T ss_dssp EEECSCSSS
T ss_pred EEECCCchH
Confidence 999999544
No 414
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.86 E-value=0.0082 Score=56.34 Aligned_cols=86 Identities=19% Similarity=0.141 Sum_probs=58.7
Q ss_pred CCCEEEEEecC-hHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc------Chhh----hc--cCCCEEEEecCC
Q psy6348 97 YGKTLAVLGLG-RIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL------GLED----IW--PLADYITVHTPL 162 (333)
Q Consensus 97 ~gktvGIIGlG-~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~------~l~e----ll--~~aDvV~l~~P~ 162 (333)
.|++|.|+|.| .||...++.++.+|.+|++.++.. ..+.++++|...+ ++.+ +. ...|+++-++..
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 223 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGG 223 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCC
Confidence 58899999997 999999999999999999999866 4566677775421 1111 11 246777776642
Q ss_pred chhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 163 IPQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 163 t~~t~~li~~~~~~~mk~gailIN~a 188 (333)
+.+ .+.+..++++..++.++
T Consensus 224 -~~~-----~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 224 -PDG-----NELAFSLRPNGHFLTIG 243 (340)
T ss_dssp -HHH-----HHHHHTEEEEEEEEECC
T ss_pred -hhH-----HHHHHHhcCCCEEEEEe
Confidence 111 22345677777777764
No 415
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.85 E-value=0.019 Score=52.14 Aligned_cols=65 Identities=17% Similarity=0.199 Sum_probs=47.9
Q ss_pred CCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCC----CH-HHH------HhcCcccc--------ChhhhccCCCEEE
Q psy6348 98 GKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMV----SV-EDA------AKLNIASL--------GLEDIWPLADYIT 157 (333)
Q Consensus 98 gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~----~~-~~a------~~~gv~~~--------~l~ell~~aDvV~ 157 (333)
+++|.|.|. |.+|+.+++.|...|++|++.+|.. .. +.. ...+++.+ ++.++++.+|+|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 578999997 9999999999999999999998865 11 211 12354321 3567788899988
Q ss_pred EecCC
Q psy6348 158 VHTPL 162 (333)
Q Consensus 158 l~~P~ 162 (333)
.+.+.
T Consensus 82 ~~a~~ 86 (307)
T 2gas_A 82 CAAGR 86 (307)
T ss_dssp ECSSS
T ss_pred ECCcc
Confidence 87764
No 416
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.82 E-value=0.0065 Score=57.74 Aligned_cols=87 Identities=14% Similarity=0.103 Sum_probs=56.7
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC-CHHHHHhcCcccc------Chhhhcc-----CCCEEEEecCCc
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV-SVEDAAKLNIASL------GLEDIWP-----LADYITVHTPLI 163 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~gv~~~------~l~ell~-----~aDvV~l~~P~t 163 (333)
.|++|.|+|.|.+|...++.++.+|. +|++.|+.. ..+.++++|...+ ++.+.+. ..|+|+-++...
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~ 269 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSP 269 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCCH
Confidence 47899999999999999999999999 799998765 3355566665321 1111111 367777666421
Q ss_pred hhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 164 PQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 164 ~~t~~li~~~~~~~mk~gailIN~a 188 (333)
.+ -...+..++++..++.++
T Consensus 270 -~~----~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 270 -EI----LKQGVDALGILGKIAVVG 289 (371)
T ss_dssp -HH----HHHHHHTEEEEEEEEECC
T ss_pred -HH----HHHHHHHHhcCCEEEEeC
Confidence 11 134456666666666664
No 417
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=95.80 E-value=0.014 Score=55.18 Aligned_cols=95 Identities=18% Similarity=0.182 Sum_probs=61.2
Q ss_pred CCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCCHH---HHHhc-Cccc--c-------ChhhhccCCCEEEEecCC
Q psy6348 97 YGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVSVE---DAAKL-NIAS--L-------GLEDIWPLADYITVHTPL 162 (333)
Q Consensus 97 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~---~a~~~-gv~~--~-------~l~ell~~aDvV~l~~P~ 162 (333)
.++++.|.|. |.||+.+++.|...|++|++.++..+.. ..... +++. . ++.++++.+|+|+.+...
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 3678999995 9999999999999999999998876432 11211 3321 1 256778999999977653
Q ss_pred chhhHhhccHHHHhccCC-C--cEEEEccCCc
Q psy6348 163 IPQTKNLINAEVLKKCKK-G--VRVVNVARGG 191 (333)
Q Consensus 163 t~~t~~li~~~~~~~mk~-g--ailIN~aRg~ 191 (333)
.....+......++.+++ | ..||++|...
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 311122223334433332 3 4788888764
No 418
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=95.80 E-value=0.0071 Score=57.47 Aligned_cols=99 Identities=15% Similarity=0.119 Sum_probs=59.9
Q ss_pred EEEEEecChHHHHHHHHHhhC---------CCEEEE-EcCCCCHHHHHhcCc--cccChhhhccCCCEEEEecCCchhhH
Q psy6348 100 TLAVLGLGRIGREVALRMQAF---------GMKVIG-FDPMVSVEDAAKLNI--ASLGLEDIWPLADYITVHTPLIPQTK 167 (333)
Q Consensus 100 tvGIIGlG~IG~~vA~~l~~~---------G~~V~~-~d~~~~~~~a~~~gv--~~~~l~ell~~aDvV~l~~P~t~~t~ 167 (333)
++||||+|.||+.+++.+... +++|.+ +|+.... .+..+. -..++++++ +.|+|+.|+|......
T Consensus 5 rvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~--~~~~~~~~~~~d~~~ll-~iDvVve~t~~~~~a~ 81 (332)
T 2ejw_A 5 KIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRK--PRAIPQELLRAEPFDLL-EADLVVEAMGGVEAPL 81 (332)
T ss_dssp EEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTS--CCSSCGGGEESSCCCCT-TCSEEEECCCCSHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHH--hhccCcccccCCHHHHh-CCCEEEECCCCcHHHH
Confidence 799999999999999988765 466654 5665422 111121 123788988 9999999998543212
Q ss_pred hhccHHHHhccCCCcEEEEccCCcc-cchHhHHhhhhcC
Q psy6348 168 NLINAEVLKKCKKGVRVVNVARGGI-VDENALLDSLKCG 205 (333)
Q Consensus 168 ~li~~~~~~~mk~gailIN~aRg~~-vd~~aL~~aL~~g 205 (333)
.. ..+.++.|.-+|...-..+ -.-++|.++.++.
T Consensus 82 ~~----~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 82 RL----VLPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp HH----HHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred HH----HHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 12 2233556655665322222 2345566666655
No 419
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.78 E-value=0.0096 Score=57.24 Aligned_cols=92 Identities=15% Similarity=0.120 Sum_probs=60.1
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC-CHHHHHhcCccccC-----h-hhhc------cCCCEEEEecCC
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV-SVEDAAKLNIASLG-----L-EDIW------PLADYITVHTPL 162 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~gv~~~~-----l-~ell------~~aDvV~l~~P~ 162 (333)
.|++|.|+|.|.||...++.++.+|. +|++.|+.. ..+.++++|...++ + .+.+ ...|+|+-++..
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~ 264 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGVDAVGF 264 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEEECCCC
Confidence 58899999999999999999999999 999999865 33556667764221 1 1111 146777777653
Q ss_pred chh----------hHhhccHHHHhccCCCcEEEEccC
Q psy6348 163 IPQ----------TKNLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 163 t~~----------t~~li~~~~~~~mk~gailIN~aR 189 (333)
... .... -...+..++++..++.++.
T Consensus 265 ~~~~~~~~~~~~~~~~~-~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 265 EAHGLGDEANTETPNGA-LNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp TCBCSGGGTTSBCTTHH-HHHHHHHEEEEEEEECCSC
T ss_pred ccccccccccccccHHH-HHHHHHHHhcCCEEEEecc
Confidence 210 0001 1445566777777776643
No 420
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.77 E-value=0.0099 Score=55.98 Aligned_cols=46 Identities=28% Similarity=0.450 Sum_probs=38.3
Q ss_pred CCCEEEEE-ecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcc
Q psy6348 97 YGKTLAVL-GLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIA 142 (333)
Q Consensus 97 ~gktvGII-GlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~ 142 (333)
.|++|.|+ |.|.||...++.++.+|.+|++.++.. ..+.++++|..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~ 197 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGAD 197 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCS
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCc
Confidence 68999999 799999999999999999999999855 33555666653
No 421
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=95.77 E-value=0.032 Score=53.15 Aligned_cols=85 Identities=22% Similarity=0.168 Sum_probs=50.9
Q ss_pred CEEEEEecChHHHHHHHHHhhC-CCEEEEE-cCCCCH-H-H--------------------HHhcCcccc-ChhhhccCC
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF-GMKVIGF-DPMVSV-E-D--------------------AAKLNIASL-GLEDIWPLA 153 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~~-d~~~~~-~-~--------------------a~~~gv~~~-~l~ell~~a 153 (333)
.+|||+|+|+||+.+++.+... +++|.+. |..... . . ....++... +.++++.++
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 82 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIEDA 82 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGGC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccCC
Confidence 3899999999999999998765 6887665 332111 0 0 111111111 355666799
Q ss_pred CEEEEecCCchhhHhhccHHHHhccCCCcEEEEc
Q psy6348 154 DYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNV 187 (333)
Q Consensus 154 DvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~ 187 (333)
|+|+.|+|.... ... .+ -..++.|..+|..
T Consensus 83 DiV~eatg~~~s-~~~--a~-~~~l~aG~~VI~s 112 (343)
T 2yyy_A 83 DIVVDGAPKKIG-KQN--LE-NIYKPHKVKAILQ 112 (343)
T ss_dssp SEEEECCCTTHH-HHH--HH-HTTTTTTCEEEEC
T ss_pred CEEEECCCcccc-HHH--HH-HHHHHCCCEEEEC
Confidence 999999984321 111 11 2456777766654
No 422
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.75 E-value=0.028 Score=51.52 Aligned_cols=64 Identities=16% Similarity=0.156 Sum_probs=48.3
Q ss_pred CEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCC-H-HH---HHhcCcccc--------ChhhhccCCCEEEEecCC
Q psy6348 99 KTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVS-V-ED---AAKLNIASL--------GLEDIWPLADYITVHTPL 162 (333)
Q Consensus 99 ktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~-~-~~---a~~~gv~~~--------~l~ell~~aDvV~l~~P~ 162 (333)
++|.|.|. |.+|+.+++.|...|++|++.+|..+ . .. ....+++.+ ++.++++++|+|+.+.+.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~ 89 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAF 89 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCch
Confidence 58999996 99999999999999999999988763 2 11 123455432 356778899999888763
No 423
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.74 E-value=0.011 Score=58.62 Aligned_cols=65 Identities=17% Similarity=0.194 Sum_probs=48.8
Q ss_pred CCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH-HH-HHhcCcccc--------Chhhh-ccCCCEEEEecCC
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV-ED-AAKLNIASL--------GLEDI-WPLADYITVHTPL 162 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~-a~~~gv~~~--------~l~el-l~~aDvV~l~~P~ 162 (333)
.++|-|+|+|++|+.+|+.|...|++|++.|..... +. ..++++..+ .|+++ +++||+++.+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~ 78 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNT 78 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSC
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCC
Confidence 468999999999999999999999999999986522 22 234555322 24443 6889999888764
No 424
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.73 E-value=0.0089 Score=56.36 Aligned_cols=87 Identities=17% Similarity=0.260 Sum_probs=60.2
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCCC-HHHHHhcCcccc-C-----hhh----hc--cCCCEEEEecCC
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMVS-VEDAAKLNIASL-G-----LED----IW--PLADYITVHTPL 162 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~-~~~a~~~gv~~~-~-----l~e----ll--~~aDvV~l~~P~ 162 (333)
.|.+|.|+|.|.||...++.++.+|. +|++.|+... .+.++++|...+ + +.+ +. ...|+|+-++..
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~ 245 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGD 245 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 48899999999999999999999999 8999998653 456677776421 1 111 11 147777777653
Q ss_pred chhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 163 IPQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 163 t~~t~~li~~~~~~~mk~gailIN~a 188 (333)
.+ .-...++.++++..++.++
T Consensus 246 ~~-----~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 246 VH-----TFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TT-----HHHHHHHHEEEEEEEEECC
T ss_pred hH-----HHHHHHHHHhcCCEEEEec
Confidence 21 1144556677777777764
No 425
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=95.70 E-value=0.029 Score=53.38 Aligned_cols=90 Identities=22% Similarity=0.198 Sum_probs=64.3
Q ss_pred CCCEEEEEe-cChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcccc------Chhhhc---cCCCEEEEecCCchhh
Q psy6348 97 YGKTLAVLG-LGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASL------GLEDIW---PLADYITVHTPLIPQT 166 (333)
Q Consensus 97 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~------~l~ell---~~aDvV~l~~P~t~~t 166 (333)
.|++|.|+| .|.||...++.++.+|.+|++.+.....+.++++|...+ ++.+.+ ...|+|+-++.....+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~ 262 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTET 262 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhhh
Confidence 588999999 799999999999999999999884334566677776431 122211 3589999888642111
Q ss_pred HhhccHHHHhccCCCcEEEEccCC
Q psy6348 167 KNLINAEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 167 ~~li~~~~~~~mk~gailIN~aRg 190 (333)
-...+..++++..++.++..
T Consensus 263 ----~~~~~~~l~~~G~iv~~g~~ 282 (375)
T 2vn8_A 263 ----WAPDFLKKWSGATYVTLVTP 282 (375)
T ss_dssp ----HGGGGBCSSSCCEEEESCCS
T ss_pred ----hHHHHHhhcCCcEEEEeCCC
Confidence 13445678999999988754
No 426
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=95.70 E-value=0.023 Score=53.55 Aligned_cols=91 Identities=14% Similarity=0.158 Sum_probs=57.8
Q ss_pred CEEEEEec-ChHHHHHHHHHhhCCC-------EEEEEcCC----CCHHH--H---Hhc--Cc----cc-cChhhhccCCC
Q psy6348 99 KTLAVLGL-GRIGREVALRMQAFGM-------KVIGFDPM----VSVED--A---AKL--NI----AS-LGLEDIWPLAD 154 (333)
Q Consensus 99 ktvGIIGl-G~IG~~vA~~l~~~G~-------~V~~~d~~----~~~~~--a---~~~--gv----~~-~~l~ell~~aD 154 (333)
+||.|+|. |.+|+.++..|...|+ +|..||.. ..... + .+. .+ .. .++.+.+++||
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDAD 85 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCCC
Confidence 58999998 9999999999988776 89999986 21111 1 111 11 11 25778899999
Q ss_pred EEEEecCCch---hhHh-hc--c----H---HHHhcc-CCCcEEEEccC
Q psy6348 155 YITVHTPLIP---QTKN-LI--N----A---EVLKKC-KKGVRVVNVAR 189 (333)
Q Consensus 155 vV~l~~P~t~---~t~~-li--~----~---~~~~~m-k~gailIN~aR 189 (333)
+|+++..... .++. ++ + . +.+... ++++++|+++-
T Consensus 86 ~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 86 VALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 9998864221 1110 10 1 1 122334 47899999974
No 427
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=95.69 E-value=0.0074 Score=57.07 Aligned_cols=86 Identities=16% Similarity=0.132 Sum_probs=57.0
Q ss_pred CCCEEEEE-ecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc------Chhhhc-----cCCCEEEEecCCc
Q psy6348 97 YGKTLAVL-GLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL------GLEDIW-----PLADYITVHTPLI 163 (333)
Q Consensus 97 ~gktvGII-GlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~------~l~ell-----~~aDvV~l~~P~t 163 (333)
.|++|.|+ |.|.||...++.++..|.+|++.++.. ..+.++++|...+ ++.+.+ ...|+++-++..
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~- 245 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGA- 245 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCG-
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCH-
Confidence 57899999 679999999999999999999999865 3345566665321 111111 246777766642
Q ss_pred hhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 164 PQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 164 ~~t~~li~~~~~~~mk~gailIN~a 188 (333)
+ .-...+..++++..++.++
T Consensus 246 ~-----~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 246 A-----YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp G-----GHHHHHHTEEEEEEEEECC
T ss_pred H-----HHHHHHHHhccCCEEEEEE
Confidence 1 1244556667766666664
No 428
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=95.68 E-value=0.03 Score=55.28 Aligned_cols=112 Identities=16% Similarity=0.073 Sum_probs=69.4
Q ss_pred CEEEEEecChH-HHHHHHHHhh----C-CCEEEEEcCCC--CHHH-----HH----hcCc----cc-cChhhhccCCCEE
Q psy6348 99 KTLAVLGLGRI-GREVALRMQA----F-GMKVIGFDPMV--SVED-----AA----KLNI----AS-LGLEDIWPLADYI 156 (333)
Q Consensus 99 ktvGIIGlG~I-G~~vA~~l~~----~-G~~V~~~d~~~--~~~~-----a~----~~gv----~~-~~l~ell~~aDvV 156 (333)
.||+|||.|.+ |..++..|.. + +.+|..||... .... .. ..+. .. .++.+.++.||+|
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~V 87 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFV 87 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCEE
Confidence 58999999999 8887655544 3 56899999865 2211 11 1121 11 2567899999999
Q ss_pred EEecCCchh---hH----------------------------hhcc--HHHHhccCCCcEEEEccCCcccchHhHHhhhh
Q psy6348 157 TVHTPLIPQ---TK----------------------------NLIN--AEVLKKCKKGVRVVNVARGGIVDENALLDSLK 203 (333)
Q Consensus 157 ~l~~P~t~~---t~----------------------------~li~--~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~ 203 (333)
++++|.... ++ .++. .+.+....|++++||.+-.--+-..++.+...
T Consensus 88 Vitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a~~k~~p 167 (450)
T 1s6y_A 88 TTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYTK 167 (450)
T ss_dssp EECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHCC
T ss_pred EEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhCC
Confidence 999994321 11 1110 12334456899999998766555566655543
Q ss_pred cCCceEE
Q psy6348 204 CGHCGGA 210 (333)
Q Consensus 204 ~g~i~ga 210 (333)
..++.|.
T Consensus 168 ~~rViG~ 174 (450)
T 1s6y_A 168 QEKVVGL 174 (450)
T ss_dssp CCCEEEC
T ss_pred CCCEEEe
Confidence 3355554
No 429
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=95.67 E-value=0.0098 Score=55.54 Aligned_cols=103 Identities=21% Similarity=0.321 Sum_probs=66.2
Q ss_pred CEEEEEec-ChHHHHHHHHHhhCCCE-EEEEcCCCCHHHHHhcCcccc-Chhhhcc--C-CCEEEEecCCchhhHhhccH
Q psy6348 99 KTLAVLGL-GRIGREVALRMQAFGMK-VIGFDPMVSVEDAAKLNIASL-GLEDIWP--L-ADYITVHTPLIPQTKNLINA 172 (333)
Q Consensus 99 ktvGIIGl-G~IG~~vA~~l~~~G~~-V~~~d~~~~~~~a~~~gv~~~-~l~ell~--~-aDvV~l~~P~t~~t~~li~~ 172 (333)
.++.|+|. |++|+.+++.+...|++ |...+|....+ +-.|+... +++++.. . .|++++++|. +.+...+ +
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~g~--~i~G~~vy~sl~el~~~~~~~DvaIi~vp~-~~~~~~v-~ 89 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKGGS--EVHGVPVYDSVKEALAEHPEINTSIVFVPA-PFAPDAV-Y 89 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHCTTCCEEEECCCG-GGHHHHH-H
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCc--eECCEeeeCCHHHHhhcCCCCCEEEEecCH-HHHHHHH-H
Confidence 35777799 99999999999988998 34667653211 12466554 7899887 5 9999999994 3444443 2
Q ss_pred HHHhccCCCcE-EEEccCC-cccchHhHHhhhhcCCce
Q psy6348 173 EVLKKCKKGVR-VVNVARG-GIVDENALLDSLKCGHCG 208 (333)
Q Consensus 173 ~~~~~mk~gai-lIN~aRg-~~vd~~aL~~aL~~g~i~ 208 (333)
+..+ .|.- +|..+.| ..-+++.|.++.++..+.
T Consensus 90 ea~~---~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~ 124 (297)
T 2yv2_A 90 EAVD---AGIRLVVVITEGIPVHDTMRFVNYARQKGAT 124 (297)
T ss_dssp HHHH---TTCSEEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 2322 3332 4445544 223456788888776554
No 430
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=95.63 E-value=0.023 Score=52.90 Aligned_cols=87 Identities=17% Similarity=0.123 Sum_probs=56.6
Q ss_pred CEEEEEe-cChHHHHHHHHHh-hCCCEEEEE-cCCCCHH----HHH-----hcCcccc-ChhhhccCCCEEEEecCCchh
Q psy6348 99 KTLAVLG-LGRIGREVALRMQ-AFGMKVIGF-DPMVSVE----DAA-----KLNIASL-GLEDIWPLADYITVHTPLIPQ 165 (333)
Q Consensus 99 ktvGIIG-lG~IG~~vA~~l~-~~G~~V~~~-d~~~~~~----~a~-----~~gv~~~-~l~ell~~aDvV~l~~P~t~~ 165 (333)
.+|+|+| +|+||+.+++.+. .-++++.+. |+..+.. ..+ ..|+... ++++++.++|+|+-..+. +.
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~p-~a 100 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQP-QA 100 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSCH-HH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCCH-HH
Confidence 4899999 9999999999876 457887664 7653211 111 2344443 799999999999977651 22
Q ss_pred hHhhccHHHHhccCCCcEEEEccCC
Q psy6348 166 TKNLINAEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 166 t~~li~~~~~~~mk~gailIN~aRg 190 (333)
+. ......++.|.-+|-.+.|
T Consensus 101 ~~----~~~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 101 SV----LYANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp HH----HHHHHHHHHTCEEEECCCC
T ss_pred HH----HHHHHHHHcCCCEEEECCC
Confidence 22 1122235567777766666
No 431
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.63 E-value=0.012 Score=53.26 Aligned_cols=62 Identities=21% Similarity=0.273 Sum_probs=46.3
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccc--------cChhhhccC-CCEEEEecC
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIAS--------LGLEDIWPL-ADYITVHTP 161 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~--------~~l~ell~~-aDvV~l~~P 161 (333)
.+++|.|.|.|.||+.+++.|...|++|++.++..+.. ..+++. .+++++++. +|+|+.+..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPM---PAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCC---CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcccc---ccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 36789999999999999999999999999999865321 122221 135566766 999987753
No 432
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.63 E-value=0.0062 Score=56.94 Aligned_cols=87 Identities=18% Similarity=0.160 Sum_probs=57.5
Q ss_pred CCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCC-CHHHH-HhcCcccc------Chhhhc-----cCCCEEEEecCC
Q psy6348 97 YGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMV-SVEDA-AKLNIASL------GLEDIW-----PLADYITVHTPL 162 (333)
Q Consensus 97 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a-~~~gv~~~------~l~ell-----~~aDvV~l~~P~ 162 (333)
.|+++.|+|. |.||...++.++..|++|++.++.. ..+.+ +++|...+ ++.+.+ ...|+++-++..
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGG 228 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCc
Confidence 5889999999 9999999999999999999999865 23444 55665321 111111 236777666541
Q ss_pred chhhHhhccHHHHhccCCCcEEEEccC
Q psy6348 163 IPQTKNLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 163 t~~t~~li~~~~~~~mk~gailIN~aR 189 (333)
+ .-...+..++++..++.++.
T Consensus 229 -~-----~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 229 -E-----ILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp -H-----HHHHHHTTEEEEEEEEECCC
T ss_pred -c-----hHHHHHHHHhhCCEEEEEee
Confidence 1 12445566777777776643
No 433
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.58 E-value=0.0095 Score=56.57 Aligned_cols=87 Identities=13% Similarity=0.011 Sum_probs=58.0
Q ss_pred CCCEEEEEe-cChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc------Chhhhc-----cCCCEEEEecCCc
Q psy6348 97 YGKTLAVLG-LGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL------GLEDIW-----PLADYITVHTPLI 163 (333)
Q Consensus 97 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~------~l~ell-----~~aDvV~l~~P~t 163 (333)
.|+++.|+| .|.||...++.++.+|++|++.++.. ..+.++++|...+ ++.+.+ ...|+|+-++..
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~- 241 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG- 241 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCT-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCH-
Confidence 588999999 79999999999999999999999864 3345566665321 121221 246777776652
Q ss_pred hhhHhhccHHHHhccCCCcEEEEccC
Q psy6348 164 PQTKNLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 164 ~~t~~li~~~~~~~mk~gailIN~aR 189 (333)
+ .-...++.|+++..+|.++.
T Consensus 242 ~-----~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 242 A-----MFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp H-----HHHHHHHHEEEEEEEEECCC
T ss_pred H-----HHHHHHHHHhcCCEEEEEeC
Confidence 1 12345566677767776653
No 434
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=95.58 E-value=0.018 Score=54.87 Aligned_cols=87 Identities=13% Similarity=0.171 Sum_probs=54.2
Q ss_pred CEEEEEe-cChHHHHHHHHHhh-CCCEEEEEcCCC---CH-HHHH-----hcC---cccc---ChhhhccCCCEEEEecC
Q psy6348 99 KTLAVLG-LGRIGREVALRMQA-FGMKVIGFDPMV---SV-EDAA-----KLN---IASL---GLEDIWPLADYITVHTP 161 (333)
Q Consensus 99 ktvGIIG-lG~IG~~vA~~l~~-~G~~V~~~d~~~---~~-~~a~-----~~g---v~~~---~l~ell~~aDvV~l~~P 161 (333)
.+|+|+| .|.+|+.+.++|.. -.+++..+.... +. .... -.| .... +.+++++++|+|++|+|
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~p 84 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATA 84 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECSC
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECCC
Confidence 5899999 59999999999987 456777664322 11 1111 012 1222 34555589999999998
Q ss_pred CchhhHhhccHHHHhccCCCcEEEEccCC
Q psy6348 162 LIPQTKNLINAEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 162 ~t~~t~~li~~~~~~~mk~gailIN~aRg 190 (333)
. ..++... . ..++.|+.+|+.|.-
T Consensus 85 ~-~~s~~~~-~---~~~~~g~~vIDlSa~ 108 (337)
T 3dr3_A 85 H-EVSHDLA-P---QFLEAGCVVFDLSGA 108 (337)
T ss_dssp H-HHHHHHH-H---HHHHTTCEEEECSST
T ss_pred h-HHHHHHH-H---HHHHCCCEEEEcCCc
Confidence 3 2222221 2 224679999999754
No 435
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.56 E-value=0.016 Score=54.03 Aligned_cols=45 Identities=22% Similarity=0.263 Sum_probs=36.3
Q ss_pred CCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCc
Q psy6348 97 YGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNI 141 (333)
Q Consensus 97 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv 141 (333)
.|+++.|.|. |.||..+++.++..|++|++.++.. ..+.++++|.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~ 191 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF 191 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC
Confidence 5899999998 9999999999999999999999854 2233444553
No 436
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.54 E-value=0.063 Score=49.71 Aligned_cols=68 Identities=19% Similarity=0.253 Sum_probs=50.2
Q ss_pred ccCCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCC--HHHHH---h-------cCcccc--------ChhhhccCC
Q psy6348 95 ELYGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVS--VEDAA---K-------LNIASL--------GLEDIWPLA 153 (333)
Q Consensus 95 ~l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~--~~~a~---~-------~gv~~~--------~l~ell~~a 153 (333)
.+.+++|.|.|. |.||+.+++.|...|++|++.++... ..... . .+++.+ +++++++++
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 457899999995 99999999999999999999998653 22111 1 233321 356788899
Q ss_pred CEEEEecCC
Q psy6348 154 DYITVHTPL 162 (333)
Q Consensus 154 DvV~l~~P~ 162 (333)
|+|+.+...
T Consensus 102 d~Vih~A~~ 110 (351)
T 3ruf_A 102 DHVLHQAAL 110 (351)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 999887653
No 437
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.54 E-value=0.021 Score=53.90 Aligned_cols=86 Identities=15% Similarity=0.122 Sum_probs=55.6
Q ss_pred CCCEEEEEecChHHHHH-HHHH-hhCCCE-EEEEcCCCC----HHHHHhcCcccc-----Chhhhc---cCCCEEEEecC
Q psy6348 97 YGKTLAVLGLGRIGREV-ALRM-QAFGMK-VIGFDPMVS----VEDAAKLNIASL-----GLEDIW---PLADYITVHTP 161 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~v-A~~l-~~~G~~-V~~~d~~~~----~~~a~~~gv~~~-----~l~ell---~~aDvV~l~~P 161 (333)
.+++|.|+|.|.+|... ++.+ +.+|.+ |++.++... .+.++++|...+ ++.++. ...|+|+-++.
T Consensus 172 ~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~i~~~~gg~Dvvid~~g 251 (357)
T 2b5w_A 172 DPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQMDFIYEATG 251 (357)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGGHHHHSCCEEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHHHHHhCCCCCEEEECCC
Confidence 34899999999999999 9999 999997 999998765 466677776432 111110 13566666554
Q ss_pred CchhhHhhccHHHHhccCCCcEEEEc
Q psy6348 162 LIPQTKNLINAEVLKKCKKGVRVVNV 187 (333)
Q Consensus 162 ~t~~t~~li~~~~~~~mk~gailIN~ 187 (333)
.. .+ -...++.++++..++.+
T Consensus 252 ~~-~~----~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 252 FP-KH----AIQSVQALAPNGVGALL 272 (357)
T ss_dssp CH-HH----HHHHHHHEEEEEEEEEC
T ss_pred Ch-HH----HHHHHHHHhcCCEEEEE
Confidence 21 11 13344555666555555
No 438
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=95.53 E-value=0.018 Score=56.78 Aligned_cols=84 Identities=29% Similarity=0.379 Sum_probs=61.0
Q ss_pred ccCCCEEEEEecCh----------HHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcC--cccc-ChhhhccCCCEEEEecC
Q psy6348 95 ELYGKTLAVLGLGR----------IGREVALRMQAFGMKVIGFDPMVSVEDAAKLN--IASL-GLEDIWPLADYITVHTP 161 (333)
Q Consensus 95 ~l~gktvGIIGlG~----------IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g--v~~~-~l~ell~~aDvV~l~~P 161 (333)
.+.|++|+|+|+-- =...+++.|...|.+|.+|||....+....++ +.++ +++++++++|.|+++++
T Consensus 330 ~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L~~~Ga~V~~~DP~~~~~~~~~~~~~~~~~~~~~~a~~~aDavvi~t~ 409 (444)
T 3vtf_A 330 GLRGRHVGVLGLAFKPNTDDVRESRGVEVARLLLERGARVYVHDPMAMEKARAVLGDSVTYVEDPQALLDQVEGVIIATA 409 (444)
T ss_dssp CCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHGGGSEECSCHHHHHHHCSEEEECSC
T ss_pred ccCCCEEEEEeeecCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChHHHHhcCCCceecCCHHHHHhCCCEEEEccC
Confidence 47899999999862 36778999999999999999987443333333 4444 68899999999999986
Q ss_pred CchhhHhhccHHHHhccCCCcEEEEc
Q psy6348 162 LIPQTKNLINAEVLKKCKKGVRVVNV 187 (333)
Q Consensus 162 ~t~~t~~li~~~~~~~mk~gailIN~ 187 (333)
- ++-+.+ + + ++.++++.
T Consensus 410 h-~ef~~l-d------~-~~~vv~D~ 426 (444)
T 3vtf_A 410 W-PQYEGL-D------Y-RGKVVVDG 426 (444)
T ss_dssp C-GGGGGS-C------C-TTCEEEES
T ss_pred C-HHHhCC-C------c-CCCEEEEC
Confidence 3 333322 1 2 45677774
No 439
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.52 E-value=0.0079 Score=58.88 Aligned_cols=109 Identities=14% Similarity=0.175 Sum_probs=69.2
Q ss_pred ccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCH---HHHHhcCcccc---ChhhhccCCCEEEEecC---Cchh
Q psy6348 95 ELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSV---EDAAKLNIASL---GLEDIWPLADYITVHTP---LIPQ 165 (333)
Q Consensus 95 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~---~~a~~~gv~~~---~l~ell~~aDvV~l~~P---~t~~ 165 (333)
++.+|++.|||+|..|.+.|+.|+..|++|.++|.+... ...+ .|++.. ...+.+..+|.|++.-. .++.
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~~~~~~d~vV~s~gi~~~~p~ 80 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDEWLMAADLIVASPGIALAHPS 80 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHHHHHTCSEEEECTTSCTTCHH
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHHHhccCCEEEeCCCCCCCCHH
Confidence 357899999999999999999999999999999976522 2233 566543 12455668999988732 2232
Q ss_pred hHh-------hccHH-HH-hccCCCcEEEEccCCcccchHhHHhhhhc
Q psy6348 166 TKN-------LINAE-VL-KKCKKGVRVVNVARGGIVDENALLDSLKC 204 (333)
Q Consensus 166 t~~-------li~~~-~~-~~mk~gailIN~aRg~~vd~~aL~~aL~~ 204 (333)
... ++.+- .+ ..++...+-|--+.|+--...-|...|++
T Consensus 81 ~~~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~ 128 (439)
T 2x5o_A 81 LSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKA 128 (439)
T ss_dssp HHHHHHTTCEEECHHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCcEEEHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHh
Confidence 222 23322 22 22444445554456666655556666655
No 440
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=95.52 E-value=0.0089 Score=56.14 Aligned_cols=63 Identities=13% Similarity=0.125 Sum_probs=45.2
Q ss_pred CEEEEEecChHHHHHHHHHhhCCCEEEE-EcCCC--CHHHH----HhcCc--c-ccChhhhcc--CCCEEEEecCC
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGMKVIG-FDPMV--SVEDA----AKLNI--A-SLGLEDIWP--LADYITVHTPL 162 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~~V~~-~d~~~--~~~~a----~~~gv--~-~~~l~ell~--~aDvV~l~~P~ 162 (333)
.++||||+|.+|+..++.+ .-+.+|.+ +|+.. ..+.+ ++.|+ . +.+++++++ +.|+|++++|.
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~ 77 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVF 77 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSH
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCc
Confidence 4899999999999777766 66788775 67764 22222 23354 2 348999986 49999999984
No 441
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.51 E-value=0.009 Score=56.12 Aligned_cols=35 Identities=31% Similarity=0.465 Sum_probs=32.5
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV 131 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~ 131 (333)
.|++|.|+|.|.+|...++.++.+|. +|++.++..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~ 199 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNP 199 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 68899999999999999999999999 999999853
No 442
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.49 E-value=0.019 Score=54.54 Aligned_cols=31 Identities=29% Similarity=0.470 Sum_probs=25.5
Q ss_pred CEEEEEecChHHHHHHHHHhhC---CCEEEEEcC
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF---GMKVIGFDP 129 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~---G~~V~~~d~ 129 (333)
.+|||+|+|+||+.+.+.|... .++|.+...
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~ 34 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAIND 34 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEc
Confidence 4799999999999999988653 589886644
No 443
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.46 E-value=0.019 Score=54.78 Aligned_cols=46 Identities=22% Similarity=0.276 Sum_probs=37.9
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCC-CEEEEEcCCC-CHHHHHhcCcc
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFG-MKVIGFDPMV-SVEDAAKLNIA 142 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G-~~V~~~d~~~-~~~~a~~~gv~ 142 (333)
.|++|.|+|.|.+|...++.++.+| .+|++.++.. ..+.++++|..
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~ 242 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD 242 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCc
Confidence 4789999999999999999999999 6999999865 33455666653
No 444
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=95.44 E-value=0.027 Score=55.61 Aligned_cols=108 Identities=16% Similarity=0.124 Sum_probs=67.4
Q ss_pred CCEEEEEecChHHHH-HHHHHhhCCCEEEEEcCCCCH--HHHHhcCcccc--ChhhhccCCCEEEEe--cCC-chhhH--
Q psy6348 98 GKTLAVLGLGRIGRE-VALRMQAFGMKVIGFDPMVSV--EDAAKLNIASL--GLEDIWPLADYITVH--TPL-IPQTK-- 167 (333)
Q Consensus 98 gktvGIIGlG~IG~~-vA~~l~~~G~~V~~~d~~~~~--~~a~~~gv~~~--~l~ell~~aDvV~l~--~P~-t~~t~-- 167 (333)
.|++.|||+|..|.+ +|+.|+..|++|.++|...+. +..++.|+... ...+.++.+|+|++. +|. ++...
T Consensus 18 ~~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~a~~vv~s~~i~~~~~~~~~a 97 (475)
T 1p3d_A 18 VQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHIEGASVVVVSSAIKDDNPELVTS 97 (475)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGGGGTTCSEEEECTTSCTTCHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHhCCCEEECCCCHHHcCCCCEEEECCCCCCCCHHHHHH
Confidence 478999999999997 999999999999999987643 23455676553 112345789998886 321 22111
Q ss_pred ---h--hccH-HHH-hccCC-CcEEEEccCCcccchHhHHhhhhcC
Q psy6348 168 ---N--LINA-EVL-KKCKK-GVRVVNVARGGIVDENALLDSLKCG 205 (333)
Q Consensus 168 ---~--li~~-~~~-~~mk~-gailIN~aRg~~vd~~aL~~aL~~g 205 (333)
+ ++.. +.+ ..++. ..+-|--+.|+--...-|...|++.
T Consensus 98 ~~~~i~vl~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 143 (475)
T 1p3d_A 98 KQKRIPVIQRAQMLAEIMRFRHGIAVAGTHGKTTTTAMISMIYTQA 143 (475)
T ss_dssp HHTTCCEEEHHHHHHHHHHTSEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred HHcCCcEEEHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhC
Confidence 1 2222 222 22221 2344444567766666677777653
No 445
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=95.44 E-value=0.014 Score=54.38 Aligned_cols=86 Identities=15% Similarity=0.089 Sum_probs=55.4
Q ss_pred CCCEEEEEe-cChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc------Chhh----hc--cCCCEEEEecCC
Q psy6348 97 YGKTLAVLG-LGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL------GLED----IW--PLADYITVHTPL 162 (333)
Q Consensus 97 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~------~l~e----ll--~~aDvV~l~~P~ 162 (333)
.|+++.|+| .|.||...++.++..|.+|++.++.. ..+.++++|...+ ++.+ +. ...|+|+-++..
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ 219 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCG
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCCh
Confidence 588999999 79999999999999999999999865 3345556664321 1111 11 246666665542
Q ss_pred chhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 163 IPQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 163 t~~t~~li~~~~~~~mk~gailIN~a 188 (333)
+ .-...+..++++..++.++
T Consensus 220 -~-----~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 220 -D-----TWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp -G-----GHHHHHTTEEEEEEEEECC
T ss_pred -H-----HHHHHHHHhcCCCEEEEEe
Confidence 1 1134455666666666653
No 446
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.43 E-value=0.019 Score=56.10 Aligned_cols=85 Identities=18% Similarity=0.164 Sum_probs=59.4
Q ss_pred CCCEEEEEecC----------hHHHHHHHHHhhCCCEEEEEcCCCCHHHH----HhcC--------cccc-ChhhhccCC
Q psy6348 97 YGKTLAVLGLG----------RIGREVALRMQAFGMKVIGFDPMVSVEDA----AKLN--------IASL-GLEDIWPLA 153 (333)
Q Consensus 97 ~gktvGIIGlG----------~IG~~vA~~l~~~G~~V~~~d~~~~~~~a----~~~g--------v~~~-~l~ell~~a 153 (333)
.|++|+|+|+. .-...+++.|...|.+|.+|||..+.... +.++ ..++ ++.+.+++|
T Consensus 312 ~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (436)
T 1mv8_A 312 DTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVVASS 391 (436)
T ss_dssp SCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHHHHHC
T ss_pred cCCEEEEEccccCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChhhccchhhhhcccccccccccccCCHHHHHhCC
Confidence 68999999997 46788999999999999999997422110 1111 1233 678889999
Q ss_pred CEEEEecCCchhhHhhccHHHHhccCCCcEEEEc
Q psy6348 154 DYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNV 187 (333)
Q Consensus 154 DvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~ 187 (333)
|+|++++.- ++-+.+ + .+.|+ +.+++|+
T Consensus 392 d~~vi~~~~-~~~~~~-~---~~~~~-~~~i~D~ 419 (436)
T 1mv8_A 392 DVLVLGNGD-ELFVDL-V---NKTPS-GKKLVDL 419 (436)
T ss_dssp SEEEECSCC-GGGHHH-H---HSCCT-TCEEEES
T ss_pred cEEEEeCCc-HHHHhh-h---HHhcC-CCEEEEC
Confidence 999999874 333322 1 34555 5788876
No 447
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.43 E-value=0.026 Score=52.22 Aligned_cols=106 Identities=13% Similarity=0.054 Sum_probs=72.1
Q ss_pred cCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcccc-ChhhhccCCCEEEEecCCch----------
Q psy6348 96 LYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASL-GLEDIWPLADYITVHTPLIP---------- 164 (333)
Q Consensus 96 l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~-~l~ell~~aDvV~l~~P~t~---------- 164 (333)
+.|++|.|+|........++.|...|++|..+.-. .+.....|.... ++.+.++++|+|+...|...
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~--~~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a 82 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFD--QLDHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFS 82 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCT--TSSCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEecc--ccccccccceeccchHHHHhcCCEEEeccccccCCcccccccc
Confidence 56889999999999999999999999999877421 111112233332 46778899999987544321
Q ss_pred hhHhhccHHHHhccCCCcEEEEccCCcccchHhHHhhhhcCCce
Q psy6348 165 QTKNLINAEVLKKCKKGVRVVNVARGGIVDENALLDSLKCGHCG 208 (333)
Q Consensus 165 ~t~~li~~~~~~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 208 (333)
.+...++++.++.++++.+++ .++ |..++.+++.+..+.
T Consensus 83 ~~~~~~~~~~l~~~~~l~~i~----~g~-~~~d~~~~~~~~gi~ 121 (300)
T 2rir_A 83 NEEVVLKQDHLDRTPAHCVIF----SGI-SNAYLENIAAQAKRK 121 (300)
T ss_dssp SSCEECCHHHHHTSCTTCEEE----ESS-CCHHHHHHHHHTTCC
T ss_pred cCCccchHHHHhhcCCCCEEE----Eec-CCHHHHHHHHHCCCE
Confidence 122336788889999988877 233 666755666666554
No 448
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.42 E-value=0.038 Score=56.47 Aligned_cols=129 Identities=17% Similarity=0.176 Sum_probs=83.1
Q ss_pred hCCcEEEECCCC-CchHHHHHHHHHHHHHhcCCCccchhhhcCcccccCCCc-cccCCCEEEEEecChHHHHHHHHHhhC
Q psy6348 43 RKGVLVLNAPGG-NFISACELTCSLISALSRNVPQGCQSLKEGKWDRKLYTG-TELYGKTLAVLGLGRIGREVALRMQAF 120 (333)
Q Consensus 43 ~~gI~V~n~p~~-n~~avAE~~l~l~l~~~R~i~~~~~~~~~g~w~~~~~~g-~~l~gktvGIIGlG~IG~~vA~~l~~~ 120 (333)
+.+-..++-... +..-.||.+.-+-|-+.| |+--...| ..|.+++|.|||+|.+|..+|+.|...
T Consensus 282 kl~~~~~~l~~~~dp~~la~~~~~Lnlklm~-------------wRllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~a 348 (615)
T 4gsl_A 282 KLAPRVVDLSSLLDPLKIADQSVDLNLKLMK-------------WRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAW 348 (615)
T ss_dssp CSCCEEEECHHHHCHHHHHHHHHHHHHHHHH-------------HHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHT
T ss_pred CcceeEEeccccCCHHHHHhhhhhhhhHHHH-------------HhhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHc
Confidence 444566666443 566778877777555544 32111112 368999999999999999999999999
Q ss_pred CC-EEEEEcCCC-------------------CH-HHH----Hhc--Cccc--c----------------------Chhhh
Q psy6348 121 GM-KVIGFDPMV-------------------SV-EDA----AKL--NIAS--L----------------------GLEDI 149 (333)
Q Consensus 121 G~-~V~~~d~~~-------------------~~-~~a----~~~--gv~~--~----------------------~l~el 149 (333)
|. ++..+|... .+ +.+ .+. +++. . .++++
T Consensus 349 GVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~l 428 (615)
T 4gsl_A 349 GVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRAL 428 (615)
T ss_dssp TCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEeeccccccCccccchhhhcCCHHHHHHH
Confidence 97 788888643 11 111 111 1111 1 23567
Q ss_pred ccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 150 WPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 150 l~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~a 188 (333)
++++|+|+.|+- +.+++.+++..... .+..+|+.+
T Consensus 429 l~~~DlVvd~tD-n~~tR~~ln~~c~~---~~~PlI~aa 463 (615)
T 4gsl_A 429 IKEHDIIFLLVD-SRESRWLPSLLSNI---ENKTVINAA 463 (615)
T ss_dssp HHHCSEEEECCS-SGGGTHHHHHHHHH---TTCEEEEEE
T ss_pred hhcCCEEEecCC-CHHHHHHHHHHHHH---cCCeEEEEE
Confidence 889999998874 67788888776554 345577764
No 449
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.42 E-value=0.04 Score=52.25 Aligned_cols=86 Identities=14% Similarity=0.108 Sum_probs=58.9
Q ss_pred CCCEEEEEe-cChHHHHHHHHHhh-CCCEEEEEcCCC-CHHHHHhcCcccc-----Chhhhc-----cCCCEEEEecCCc
Q psy6348 97 YGKTLAVLG-LGRIGREVALRMQA-FGMKVIGFDPMV-SVEDAAKLNIASL-----GLEDIW-----PLADYITVHTPLI 163 (333)
Q Consensus 97 ~gktvGIIG-lG~IG~~vA~~l~~-~G~~V~~~d~~~-~~~~a~~~gv~~~-----~l~ell-----~~aDvV~l~~P~t 163 (333)
.|++|.|+| .|.+|...++.++. .|.+|++.++.. ..+.++++|...+ ++.+.+ ...|+|+-++..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g~- 249 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHT- 249 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSCH-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCCc-
Confidence 588999999 89999999999998 599999999865 3456677776422 121211 247777776641
Q ss_pred hhhHhhccHHHHhccCCCcEEEEc
Q psy6348 164 PQTKNLINAEVLKKCKKGVRVVNV 187 (333)
Q Consensus 164 ~~t~~li~~~~~~~mk~gailIN~ 187 (333)
+. . -...++.++++..++.+
T Consensus 250 ~~---~-~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 250 DK---H-AAEIADLIAPQGRFCLI 269 (363)
T ss_dssp HH---H-HHHHHHHSCTTCEEEEC
T ss_pred hh---h-HHHHHHHhcCCCEEEEE
Confidence 11 1 14455667887777766
No 450
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=95.42 E-value=0.073 Score=47.60 Aligned_cols=38 Identities=21% Similarity=0.315 Sum_probs=33.6
Q ss_pred cccCCCEEEEEec-Ch--HHHHHHHHHhhCCCEEEEEcCCC
Q psy6348 94 TELYGKTLAVLGL-GR--IGREVALRMQAFGMKVIGFDPMV 131 (333)
Q Consensus 94 ~~l~gktvGIIGl-G~--IG~~vA~~l~~~G~~V~~~d~~~ 131 (333)
.++.||++-|.|. |. ||+.+|+.|...|++|++.++..
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 43 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE 43 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence 3578999999998 45 99999999999999999998764
No 451
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.41 E-value=0.017 Score=55.36 Aligned_cols=92 Identities=16% Similarity=0.133 Sum_probs=60.1
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC-CHHHHHhcCccccC------hhhhc------cCCCEEEEecCC
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV-SVEDAAKLNIASLG------LEDIW------PLADYITVHTPL 162 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~a~~~gv~~~~------l~ell------~~aDvV~l~~P~ 162 (333)
.|++|.|+|.|.+|...++.++.+|. +|++.|+.. ..+.++++|+..++ +.+.+ ...|+|+-++..
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~ 264 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGF 264 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCCT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCEEEECCCC
Confidence 58899999999999999999999999 799998865 33566777764321 11111 246888777753
Q ss_pred chhh-----H-----hhccHHHHhccCCCcEEEEcc
Q psy6348 163 IPQT-----K-----NLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 163 t~~t-----~-----~li~~~~~~~mk~gailIN~a 188 (333)
.... . .-.-...+..++++..++.++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 265 EARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp TCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred cccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 2100 0 001134556677777777665
No 452
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=95.41 E-value=0.042 Score=52.32 Aligned_cols=85 Identities=15% Similarity=0.202 Sum_probs=51.0
Q ss_pred CEEEEEe-cChHHHHHHHHHhhC-CCEEEEE-cCC-CC-HHHHHhc-------------Ccccc--ChhhhccCCCEEEE
Q psy6348 99 KTLAVLG-LGRIGREVALRMQAF-GMKVIGF-DPM-VS-VEDAAKL-------------NIASL--GLEDIWPLADYITV 158 (333)
Q Consensus 99 ktvGIIG-lG~IG~~vA~~l~~~-G~~V~~~-d~~-~~-~~~a~~~-------------gv~~~--~l~ell~~aDvV~l 158 (333)
.+|||+| +|.||+.+.+.|... .+++.+. +.. .. ......+ ..... +.++ +.++|+|++
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~vDvVf~ 83 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDVDVVLS 83 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTCSEEEE
T ss_pred cEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCCCEEEE
Confidence 4899999 899999999998764 3577666 322 11 1111111 11122 3344 478999999
Q ss_pred ecCCchhhHhhccHHHHhccCCCcEEEEccC
Q psy6348 159 HTPLIPQTKNLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 159 ~~P~t~~t~~li~~~~~~~mk~gailIN~aR 189 (333)
|+|.. .+..+. . ..++.|+.+|+.+.
T Consensus 84 atp~~-~s~~~a-~---~~~~aG~~VId~s~ 109 (350)
T 2ep5_A 84 ALPNE-LAESIE-L---ELVKNGKIVVSNAS 109 (350)
T ss_dssp CCCHH-HHHHHH-H---HHHHTTCEEEECSS
T ss_pred CCChH-HHHHHH-H---HHHHCCCEEEECCc
Confidence 99832 222221 2 22456888888764
No 453
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.40 E-value=0.013 Score=54.82 Aligned_cols=86 Identities=13% Similarity=0.038 Sum_probs=57.0
Q ss_pred CCCEEEEEe-cChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc------Chhh----hc--cCCCEEEEecCC
Q psy6348 97 YGKTLAVLG-LGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL------GLED----IW--PLADYITVHTPL 162 (333)
Q Consensus 97 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~------~l~e----ll--~~aDvV~l~~P~ 162 (333)
.|+++.|+| .|.||...++.++.+|.+|++.++.. ..+.++++|...+ ++.+ +. ...|+++-++..
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 227 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGK 227 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCCh
Confidence 588999999 89999999999999999999999855 3345566665321 1111 11 246777766542
Q ss_pred chhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 163 IPQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 163 t~~t~~li~~~~~~~mk~gailIN~a 188 (333)
+ .-...+..++++..++.++
T Consensus 228 -~-----~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 228 -D-----TFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp -G-----GHHHHHHHEEEEEEEEECC
T ss_pred -H-----HHHHHHHHhccCCEEEEEc
Confidence 1 1244556667766666664
No 454
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.37 E-value=0.037 Score=50.71 Aligned_cols=65 Identities=11% Similarity=0.217 Sum_probs=48.6
Q ss_pred CCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCC-C---HHHH------HhcCcccc--------ChhhhccCCCEEEE
Q psy6348 98 GKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMV-S---VEDA------AKLNIASL--------GLEDIWPLADYITV 158 (333)
Q Consensus 98 gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~---~~~a------~~~gv~~~--------~l~ell~~aDvV~l 158 (333)
.++|.|.|. |.+|+.+++.|.+.|++|++.++.. + .+.. ...+++.+ ++.++++.+|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~ 83 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS 83 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 468999996 9999999999999999999998875 2 2211 22354321 46678899999988
Q ss_pred ecCC
Q psy6348 159 HTPL 162 (333)
Q Consensus 159 ~~P~ 162 (333)
+...
T Consensus 84 ~a~~ 87 (321)
T 3c1o_A 84 ALPF 87 (321)
T ss_dssp CCCG
T ss_pred CCCc
Confidence 8763
No 455
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=95.36 E-value=0.023 Score=56.10 Aligned_cols=106 Identities=14% Similarity=0.123 Sum_probs=63.0
Q ss_pred CEEEEEecChHHHHHHHHHhhC-CCEEEE-EcCCCCHH--HHHhc-C----------------------ccc-cChhhhc
Q psy6348 99 KTLAVLGLGRIGREVALRMQAF-GMKVIG-FDPMVSVE--DAAKL-N----------------------IAS-LGLEDIW 150 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~-~d~~~~~~--~a~~~-g----------------------v~~-~~l~ell 150 (333)
-++||||+|.||+.+++.+... +++|.+ +|+..... .+++. | ... .++++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL 103 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLIL 103 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHHh
Confidence 4899999999999999888653 677655 57765321 22222 4 122 3789998
Q ss_pred c--CCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCC-cccchHhHHhhhhcCCce
Q psy6348 151 P--LADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARG-GIVDENALLDSLKCGHCG 208 (333)
Q Consensus 151 ~--~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg-~~vd~~aL~~aL~~g~i~ 208 (333)
+ +.|+|++++|... ... +-....|+.|.-++...-. ....-+.|.++-++..+.
T Consensus 104 ~d~dIDaVviaTp~p~-~H~---e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvv 160 (446)
T 3upl_A 104 SNPLIDVIIDATGIPE-VGA---ETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVI 160 (446)
T ss_dssp TCTTCCEEEECSCCHH-HHH---HHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCCCCEEEEcCCChH-HHH---HHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCe
Confidence 7 5899999998532 111 2233445666666632211 112234566666554443
No 456
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.35 E-value=0.033 Score=48.26 Aligned_cols=64 Identities=13% Similarity=0.091 Sum_probs=46.2
Q ss_pred CEEEEEe-cChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccc---------cChhhhccCCCEEEEecCCc
Q psy6348 99 KTLAVLG-LGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIAS---------LGLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 99 ktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~---------~~l~ell~~aDvV~l~~P~t 163 (333)
++|.|.| .|.||+.+++.|.+.|++|++.++........ .+++. .++.++++++|+|+.+....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-CCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence 3789999 69999999999999999999999865321100 12211 13556788899999887644
No 457
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.33 E-value=0.028 Score=51.05 Aligned_cols=64 Identities=20% Similarity=0.038 Sum_probs=48.8
Q ss_pred CCEEEEEec-ChHHHHHHHHHhhCC-CEEEEEcCCCCHHH---HHhcCcccc--------ChhhhccCCCEEEEecC
Q psy6348 98 GKTLAVLGL-GRIGREVALRMQAFG-MKVIGFDPMVSVED---AAKLNIASL--------GLEDIWPLADYITVHTP 161 (333)
Q Consensus 98 gktvGIIGl-G~IG~~vA~~l~~~G-~~V~~~d~~~~~~~---a~~~gv~~~--------~l~ell~~aDvV~l~~P 161 (333)
.|+|.|.|. |.||+.+++.|.+.| ++|++.++...... ....+++.+ ++.++++.+|+|+.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 578999998 999999999999888 99999998764321 223354321 35677899999998765
No 458
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=95.32 E-value=0.021 Score=51.40 Aligned_cols=94 Identities=15% Similarity=0.154 Sum_probs=58.3
Q ss_pred CEEEEEec-ChHHHHHHHHHhhC--CCEEEEEcCCCCH-HHHHhcCcccc--------ChhhhccCCCEEEEecCCchhh
Q psy6348 99 KTLAVLGL-GRIGREVALRMQAF--GMKVIGFDPMVSV-EDAAKLNIASL--------GLEDIWPLADYITVHTPLIPQT 166 (333)
Q Consensus 99 ktvGIIGl-G~IG~~vA~~l~~~--G~~V~~~d~~~~~-~~a~~~gv~~~--------~l~ell~~aDvV~l~~P~t~~t 166 (333)
|++.|.|. |.||+.+++.|... |++|++.++.... ......+++.+ +++++++++|+|+.+.......
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~ 80 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDN 80 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCH
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCc
Confidence 46888987 99999999999988 9999999986532 22223344321 3567888999998776532110
Q ss_pred -Hhhc-cHHHHhccC-CC-cEEEEccCCcc
Q psy6348 167 -KNLI-NAEVLKKCK-KG-VRVVNVARGGI 192 (333)
Q Consensus 167 -~~li-~~~~~~~mk-~g-ailIN~aRg~~ 192 (333)
.++. ....++.++ .+ ..+|.+|....
T Consensus 81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~ 110 (287)
T 2jl1_A 81 TLLIVQHANVVKAARDAGVKHIAYTGYAFA 110 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEETTG
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEECCCCC
Confidence 0111 112222222 23 37888877554
No 459
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.32 E-value=0.013 Score=54.98 Aligned_cols=45 Identities=24% Similarity=0.299 Sum_probs=36.6
Q ss_pred CCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHH-hcCc
Q psy6348 97 YGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVS-VEDAA-KLNI 141 (333)
Q Consensus 97 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~-~~gv 141 (333)
.|+++.|+|. |.||..+++.++..|++|++.++... .+.++ ++|.
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~ 202 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGF 202 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC
Confidence 5889999997 99999999999999999999998642 23444 4554
No 460
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=95.32 E-value=0.041 Score=53.59 Aligned_cols=87 Identities=14% Similarity=0.089 Sum_probs=62.8
Q ss_pred CCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc-Ch------------------------h--
Q psy6348 97 YGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL-GL------------------------E-- 147 (333)
Q Consensus 97 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~-~l------------------------~-- 147 (333)
.|++|.|+|. |.||...++.++..|.+|++.++.. ..+.++++|...+ +. +
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 299 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLV 299 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHH
Confidence 5899999998 9999999999999999999988654 3355667776422 11 1
Q ss_pred -hh-ccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccC
Q psy6348 148 -DI-WPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 148 -el-l~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aR 189 (333)
++ -...|+|+-++.. . .-...+..|+++..+|+++.
T Consensus 300 ~~~~g~g~Dvvid~~G~--~----~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 300 VEKAGREPDIVFEHTGR--V----TFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHSSCCSEEEECSCH--H----HHHHHHHHSCTTCEEEESCC
T ss_pred HHHhCCCceEEEECCCc--h----HHHHHHHHHhcCCEEEEEec
Confidence 11 1358999888752 1 12456677899999998864
No 461
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=95.31 E-value=0.033 Score=55.28 Aligned_cols=107 Identities=14% Similarity=0.134 Sum_probs=67.5
Q ss_pred CCEEEEEecChHHHH-HHHHHhhCCCEEEEEcCCCCH--HHHHhcCcccc---ChhhhccCCCEEEEe--cCC-chhhH-
Q psy6348 98 GKTLAVLGLGRIGRE-VALRMQAFGMKVIGFDPMVSV--EDAAKLNIASL---GLEDIWPLADYITVH--TPL-IPQTK- 167 (333)
Q Consensus 98 gktvGIIGlG~IG~~-vA~~l~~~G~~V~~~d~~~~~--~~a~~~gv~~~---~l~ell~~aDvV~l~--~P~-t~~t~- 167 (333)
.|++.|||+|..|.+ +|+.|+..|++|.++|...+. +..++.|+... +. +.++.+|+|++. +|. ++...
T Consensus 19 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~-~~~~~a~~vv~s~~i~~~~p~~~~ 97 (491)
T 2f00_A 19 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLMNLGATIYFNHRP-ENVRDASVVVVSSAISADNPEIVA 97 (491)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCG-GGGTTCSEEEECTTCCTTCHHHHH
T ss_pred CCEEEEEEcCHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHCCCEEECCCCH-HHcCCCCEEEECCCCCCCCHHHHH
Confidence 468999999999997 999999999999999987644 23455676543 23 345789998886 321 22211
Q ss_pred ----h--hccH-HHH-hccCCC-cEEEEccCCcccchHhHHhhhhcC
Q psy6348 168 ----N--LINA-EVL-KKCKKG-VRVVNVARGGIVDENALLDSLKCG 205 (333)
Q Consensus 168 ----~--li~~-~~~-~~mk~g-ailIN~aRg~~vd~~aL~~aL~~g 205 (333)
+ ++.. +.+ ..++.. .+-|--+.|+--...-|...|++.
T Consensus 98 a~~~~ipvl~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 144 (491)
T 2f00_A 98 AHEARIPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEA 144 (491)
T ss_dssp HHHTTCCEEEHHHHHHHHHTTSEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred HHHcCCcEEEHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHHHHhC
Confidence 1 2222 222 223322 333444567766666677777653
No 462
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.31 E-value=0.025 Score=51.04 Aligned_cols=64 Identities=11% Similarity=0.040 Sum_probs=47.0
Q ss_pred CEEEEEec-ChHHHHHHHHHhhC-CCEEEEEcCCCCHH-HHHhcCcccc--------ChhhhccCCCEEEEecCC
Q psy6348 99 KTLAVLGL-GRIGREVALRMQAF-GMKVIGFDPMVSVE-DAAKLNIASL--------GLEDIWPLADYITVHTPL 162 (333)
Q Consensus 99 ktvGIIGl-G~IG~~vA~~l~~~-G~~V~~~d~~~~~~-~a~~~gv~~~--------~l~ell~~aDvV~l~~P~ 162 (333)
++|.|.|. |.||+.+++.|... |.+|++.++..+.. .....+++.+ +++++++.+|+|+.+.+.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 36889995 99999999999987 99999998865321 1122344321 466789999999988764
No 463
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=95.30 E-value=0.038 Score=50.75 Aligned_cols=66 Identities=18% Similarity=0.178 Sum_probs=46.1
Q ss_pred CCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCCH---HHHHhc----Ccccc--------ChhhhccC--CCEEEE
Q psy6348 97 YGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVSV---EDAAKL----NIASL--------GLEDIWPL--ADYITV 158 (333)
Q Consensus 97 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~---~~a~~~----gv~~~--------~l~ell~~--aDvV~l 158 (333)
.||++.|.|. |.||+.+++.|...|++|++.++.... ...... ++..+ +++++++. .|+|+.
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 81 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN 81 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 5789999998 999999999999999999999987532 122222 23221 23455654 599888
Q ss_pred ecCC
Q psy6348 159 HTPL 162 (333)
Q Consensus 159 ~~P~ 162 (333)
+...
T Consensus 82 ~A~~ 85 (345)
T 2z1m_A 82 LAAQ 85 (345)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7653
No 464
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.30 E-value=0.087 Score=48.23 Aligned_cols=67 Identities=18% Similarity=0.141 Sum_probs=48.5
Q ss_pred ccCCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCCH-HHHHh-------cCccc---------cChhhhccCCCEE
Q psy6348 95 ELYGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVSV-EDAAK-------LNIAS---------LGLEDIWPLADYI 156 (333)
Q Consensus 95 ~l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~-------~gv~~---------~~l~ell~~aDvV 156 (333)
.+.|+++.|.|. |.||+.+++.|...|++|++.++.... +.... .+++. .+++++++++|+|
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 467899999998 999999999999999999999986422 11110 12211 1355677789999
Q ss_pred EEecC
Q psy6348 157 TVHTP 161 (333)
Q Consensus 157 ~l~~P 161 (333)
+.+..
T Consensus 88 ih~A~ 92 (342)
T 1y1p_A 88 AHIAS 92 (342)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 87764
No 465
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=95.29 E-value=0.02 Score=53.07 Aligned_cols=65 Identities=23% Similarity=0.183 Sum_probs=46.0
Q ss_pred ccccCCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccc--------cChhhhccCCCEEEEecCC
Q psy6348 93 GTELYGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIAS--------LGLEDIWPLADYITVHTPL 162 (333)
Q Consensus 93 g~~l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~--------~~l~ell~~aDvV~l~~P~ 162 (333)
..+..+|+|.|.|. |.||+.+++.|...|++|++.++.... .++.. .+++++++++|+|+.+...
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~ 87 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAF 87 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----SCCSEEESCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----CCccEEecCcCCHHHHHHHHhCCCEEEECCcc
Confidence 35678999999998 999999999999999999999987533 22221 1356788899999877653
No 466
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.28 E-value=0.027 Score=49.24 Aligned_cols=64 Identities=17% Similarity=0.172 Sum_probs=47.5
Q ss_pred cCCCEEEEEec-ChHHHHHHHHHhhC--CCEEEEEcCCCCHHHHHhc--Cccc--------cChhhhccCCCEEEEecC
Q psy6348 96 LYGKTLAVLGL-GRIGREVALRMQAF--GMKVIGFDPMVSVEDAAKL--NIAS--------LGLEDIWPLADYITVHTP 161 (333)
Q Consensus 96 l~gktvGIIGl-G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~a~~~--gv~~--------~~l~ell~~aDvV~l~~P 161 (333)
..++++.|.|. |.||+.+++.|... |++|++.++.. ...... ++.. .++++++++.|+|+.+..
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 78 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA--QGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTS 78 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCH--HHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCC--CchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEecc
Confidence 35789999995 99999999999998 89999999854 222221 2221 135677889999988765
No 467
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.26 E-value=0.032 Score=52.04 Aligned_cols=38 Identities=24% Similarity=0.393 Sum_probs=33.6
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV 131 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~ 131 (333)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|+..
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 46899999999999999999999998886 788888654
No 468
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=95.23 E-value=0.06 Score=50.53 Aligned_cols=99 Identities=17% Similarity=0.219 Sum_probs=61.1
Q ss_pred CEEEEEe-cChHHHHHHHHHhh---CCCEEEEEcCCCC-HHHHHh---cCc--ccc-----ChhhhccCCCEEEEecCCc
Q psy6348 99 KTLAVLG-LGRIGREVALRMQA---FGMKVIGFDPMVS-VEDAAK---LNI--ASL-----GLEDIWPLADYITVHTPLI 163 (333)
Q Consensus 99 ktvGIIG-lG~IG~~vA~~l~~---~G~~V~~~d~~~~-~~~a~~---~gv--~~~-----~l~ell~~aDvV~l~~P~t 163 (333)
+||+||| .|.||+.+|..|.. +.-++..+|.... ...+.+ ... ... +..+.+++||+|+++.+..
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~~ 80 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVA 80 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCCC
Confidence 4899999 89999999998864 4568999998652 112211 111 111 3567899999999997532
Q ss_pred --h-hhH--------hhcc--HHHHhccCCCcEEEEccCCcccchHhHH
Q psy6348 164 --P-QTK--------NLIN--AEVLKKCKKGVRVVNVARGGIVDENALL 199 (333)
Q Consensus 164 --~-~t~--------~li~--~~~~~~mk~gailIN~aRg~~vd~~aL~ 199 (333)
+ .++ .++. .+.+....|++++++++ .++|.-..+
T Consensus 81 rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvd~~t~~ 127 (312)
T 3hhp_A 81 RKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT--NPVNTTVAI 127 (312)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec--CcchhHHHH
Confidence 1 111 1111 11223346889999995 455554433
No 469
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=95.21 E-value=0.028 Score=55.44 Aligned_cols=106 Identities=14% Similarity=0.159 Sum_probs=63.1
Q ss_pred CEEEEEecChHHHHHHHHHhh----------CCCEEEE-EcCCCCHHHHHhcCccc-cChhhhcc--CCCEEEEecCCch
Q psy6348 99 KTLAVLGLGRIGREVALRMQA----------FGMKVIG-FDPMVSVEDAAKLNIAS-LGLEDIWP--LADYITVHTPLIP 164 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~----------~G~~V~~-~d~~~~~~~a~~~gv~~-~~l~ell~--~aDvV~l~~P~t~ 164 (333)
.++||||+|.||+.+++.+.. .+.+|.+ +|+..........+... .++++++. +.|+|+.++|...
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~~~~~~~d~~ell~d~diDvVve~tp~~~ 90 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEIDIVVELIGGLE 90 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHTTCCEESCTHHHHTCTTCCEEEECCCSST
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcccCcccCCHHHHhcCCCCCEEEEcCCCch
Confidence 489999999999999876652 4666655 56644222111113333 37899986 5899999999532
Q ss_pred hhHhhccHHHHhccCCCcEEEEccCCccc-chHhHHhhhhcCCce
Q psy6348 165 QTKNLINAEVLKKCKKGVRVVNVARGGIV-DENALLDSLKCGHCG 208 (333)
Q Consensus 165 ~t~~li~~~~~~~mk~gailIN~aRg~~v-d~~aL~~aL~~g~i~ 208 (333)
.-..+ ..+.|+.|.-++..--.-.. .-++|.++.++..+.
T Consensus 91 ~h~~~----~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~ 131 (444)
T 3mtj_A 91 PAREL----VMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVM 131 (444)
T ss_dssp THHHH----HHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHH----HHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCe
Confidence 22222 23445667666644332222 225677776665543
No 470
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=95.19 E-value=0.04 Score=52.09 Aligned_cols=108 Identities=20% Similarity=0.281 Sum_probs=64.6
Q ss_pred CEEEEEecChHHHHHHHHHhh-------CCCEEEEE-cCCCC-------HH----HHHhcC-cc--ccChhhhcc--CCC
Q psy6348 99 KTLAVLGLGRIGREVALRMQA-------FGMKVIGF-DPMVS-------VE----DAAKLN-IA--SLGLEDIWP--LAD 154 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~-------~G~~V~~~-d~~~~-------~~----~a~~~g-v~--~~~l~ell~--~aD 154 (333)
-+|||+|+|.||+.+++.+.. .+++|.+. |+... .+ ..++.| +. ..+.++++. +.|
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~d~~e~l~~~~iD 84 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAFSGPEDLMGEAAD 84 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBCCSGGGGTTSCCS
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccCCHHHHhcCCCCC
Confidence 379999999999999998875 35666654 55421 11 122234 22 126677774 589
Q ss_pred EEEEecCCchhhHhhccHHHHhccCCCcEEEEccCCccc-chHhHHhhhhcCCc
Q psy6348 155 YITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARGGIV-DENALLDSLKCGHC 207 (333)
Q Consensus 155 vV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg~~v-d~~aL~~aL~~g~i 207 (333)
+|+.|+|...... ..-......++.|.-+|...-+.+. .-+.|.++.++...
T Consensus 85 vVVe~T~~~~~~~-pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g~ 137 (325)
T 3ing_A 85 LLVDCTPASRDGV-REYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNSK 137 (325)
T ss_dssp EEEECCCCCSSSH-HHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTC
T ss_pred EEEECCCCccccc-hHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcCC
Confidence 9999998532111 0012344556788888876554442 34556666665544
No 471
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=95.18 E-value=0.037 Score=55.04 Aligned_cols=64 Identities=20% Similarity=0.149 Sum_probs=47.0
Q ss_pred CCEEEEEe-cChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCccccChhhhccCCCEEEEecCC
Q psy6348 98 GKTLAVLG-LGRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASLGLEDIWPLADYITVHTPL 162 (333)
Q Consensus 98 gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~~l~ell~~aDvV~l~~P~ 162 (333)
+++|.|.| .|.||+.+++.|...|++|++.++............. ..+.+.+.++|+|+.+...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~-~~~~~~l~~~D~Vih~A~~ 211 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPL-NPASDLLDGADVLVHLAGE 211 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCTT-SCCTTTTTTCSEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeeccc-chhHHhcCCCCEEEECCCC
Confidence 78999999 5999999999999999999999987643211000111 1356778899999877653
No 472
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=95.18 E-value=0.14 Score=46.33 Aligned_cols=38 Identities=24% Similarity=0.162 Sum_probs=33.8
Q ss_pred cccCCCEEEEEec-Ch--HHHHHHHHHhhCCCEEEEEcCCC
Q psy6348 94 TELYGKTLAVLGL-GR--IGREVALRMQAFGMKVIGFDPMV 131 (333)
Q Consensus 94 ~~l~gktvGIIGl-G~--IG~~vA~~l~~~G~~V~~~d~~~ 131 (333)
..+.||++-|.|. |. ||+++|+.|...|++|++.++..
T Consensus 22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 4688999999996 45 99999999999999999999875
No 473
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.18 E-value=0.017 Score=53.78 Aligned_cols=45 Identities=20% Similarity=0.217 Sum_probs=35.9
Q ss_pred CCCEEEEEe-cChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCc
Q psy6348 97 YGKTLAVLG-LGRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNI 141 (333)
Q Consensus 97 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv 141 (333)
.|+++.|+| .|.||..+++.++..|.+|++.++... .+.++++|.
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~ 186 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA 186 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC
Confidence 488999999 699999999999999999999998642 233444443
No 474
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=95.17 E-value=0.023 Score=57.99 Aligned_cols=91 Identities=20% Similarity=0.186 Sum_probs=63.0
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC-------------------CH-HHH----Hhc--Cccc---
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV-------------------SV-EDA----AKL--NIAS--- 143 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-------------------~~-~~a----~~~--gv~~--- 143 (333)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|... .+ +.+ ++. +++.
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~ 402 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 402 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence 46889999999999999999999999998 788887541 11 111 111 1211
Q ss_pred ---------------------cChhhhccCCCEEEEecCCchhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 144 ---------------------LGLEDIWPLADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 144 ---------------------~~l~ell~~aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~a 188 (333)
..++++++++|+|+.++. +.+++.+++...... +..+|+.+
T Consensus 403 ~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatD-n~~tR~lin~~c~~~---~~plI~aa 464 (598)
T 3vh1_A 403 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNIE---NKTVINAA 464 (598)
T ss_dssp CCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCS-BGGGTHHHHHHHHHT---TCEEEEEE
T ss_pred eccccccCcccccccccccCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHhc---CCCEEEEE
Confidence 123567889999999886 667888887765542 44677654
No 475
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.17 E-value=0.036 Score=52.86 Aligned_cols=89 Identities=25% Similarity=0.315 Sum_probs=59.8
Q ss_pred cccCCCEEEEEecChHHHHHHHHHhhCCC-EEEEEcCCC-CH-------------------HHH----Hhc--Ccc--c-
Q psy6348 94 TELYGKTLAVLGLGRIGREVALRMQAFGM-KVIGFDPMV-SV-------------------EDA----AKL--NIA--S- 143 (333)
Q Consensus 94 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~-------------------~~a----~~~--gv~--~- 143 (333)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|+.. +. +.+ .+. .++ .
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 193 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI 193 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence 35789999999999999999999999887 788888643 11 011 111 111 1
Q ss_pred ------cC-hhhhccCCCEEEEecCCchh-hHhhccHHHHhccCCCcEEEEc
Q psy6348 144 ------LG-LEDIWPLADYITVHTPLIPQ-TKNLINAEVLKKCKKGVRVVNV 187 (333)
Q Consensus 144 ------~~-l~ell~~aDvV~l~~P~t~~-t~~li~~~~~~~mk~gailIN~ 187 (333)
.+ +++ ++++|+|+.++- +.. ++..+++...+. +.-+|..
T Consensus 194 ~~~i~~~~~~~~-~~~~DlVvd~~D-n~~~~r~~ln~~c~~~---~~p~i~~ 240 (353)
T 3h5n_A 194 ALNINDYTDLHK-VPEADIWVVSAD-HPFNLINWVNKYCVRA---NQPYINA 240 (353)
T ss_dssp ECCCCSGGGGGG-SCCCSEEEECCC-CSTTHHHHHHHHHHHT---TCCEEEE
T ss_pred ecccCchhhhhH-hccCCEEEEecC-ChHHHHHHHHHHHHHh---CCCEEEE
Confidence 11 455 789999988774 445 888887765543 3346665
No 476
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=95.16 E-value=0.05 Score=51.10 Aligned_cols=84 Identities=11% Similarity=0.074 Sum_probs=58.7
Q ss_pred CEEEEE-ecChHHHHHHHHHhhCCCEEEEEcCCC-CHHHHHhcCcccc------Chhhhc------cCCCEEEEecCCch
Q psy6348 99 KTLAVL-GLGRIGREVALRMQAFGMKVIGFDPMV-SVEDAAKLNIASL------GLEDIW------PLADYITVHTPLIP 164 (333)
Q Consensus 99 ktvGII-GlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~a~~~gv~~~------~l~ell------~~aDvV~l~~P~t~ 164 (333)
+++.|. |.|.||...++.++.+|.+|++.++.. ..+.++++|...+ ++.+.+ ...|+++-++.. +
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~-~ 244 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTG-P 244 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCH-H
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCC-h
Confidence 677665 899999999999999999999999765 4466677776421 121111 258888877652 1
Q ss_pred hhHhhccHHHHhccCCCcEEEEcc
Q psy6348 165 QTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 165 ~t~~li~~~~~~~mk~gailIN~a 188 (333)
. + ...+..++++..++.++
T Consensus 245 ~----~-~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 245 L----A-SAIFNAMPKRARWIIYG 263 (349)
T ss_dssp H----H-HHHHHHSCTTCEEEECC
T ss_pred h----H-HHHHhhhcCCCEEEEEe
Confidence 1 1 45667788888888774
No 477
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.12 E-value=0.022 Score=53.48 Aligned_cols=35 Identities=17% Similarity=0.211 Sum_probs=32.3
Q ss_pred CCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCC
Q psy6348 97 YGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMV 131 (333)
Q Consensus 97 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~ 131 (333)
.|+++.|+|. |.+|..+++.++.+|.+|++.++..
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~ 201 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSE 201 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4789999999 9999999999999999999999854
No 478
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=95.09 E-value=0.022 Score=53.21 Aligned_cols=91 Identities=19% Similarity=0.153 Sum_probs=56.2
Q ss_pred CEEEEEecChHHHHHHHHHhhCCC--EEEEEcCCCCHHH--HHhc-------Cc--cc--cChhhhccCCCEEEEec--C
Q psy6348 99 KTLAVLGLGRIGREVALRMQAFGM--KVIGFDPMVSVED--AAKL-------NI--AS--LGLEDIWPLADYITVHT--P 161 (333)
Q Consensus 99 ktvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--a~~~-------gv--~~--~~l~ell~~aDvV~l~~--P 161 (333)
.||+|||.|.||+.+|-.|...+. ++..||....... +.++ +. .. .+--+.+++||+|++.. |
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~p 80 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLA 80 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCCC
Confidence 489999999999999988876554 8999998542222 2111 11 11 12346789999999986 3
Q ss_pred Cch-hhHh-hc--cH-------HHHhccCCCcEEEEccC
Q psy6348 162 LIP-QTKN-LI--NA-------EVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 162 ~t~-~t~~-li--~~-------~~~~~mk~gailIN~aR 189 (333)
..| .||. ++ |. +.+..-.|+++++.++-
T Consensus 81 rkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN 119 (294)
T 2x0j_A 81 RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 333 1221 11 11 12333467888888854
No 479
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.09 E-value=0.016 Score=52.00 Aligned_cols=62 Identities=13% Similarity=0.173 Sum_probs=45.1
Q ss_pred EEEEEec-ChHHHHHHHHHhhC--CCEEEEEcCCCCH-HHHHhcCccc--------cChhhhccCCCEEEEecC
Q psy6348 100 TLAVLGL-GRIGREVALRMQAF--GMKVIGFDPMVSV-EDAAKLNIAS--------LGLEDIWPLADYITVHTP 161 (333)
Q Consensus 100 tvGIIGl-G~IG~~vA~~l~~~--G~~V~~~d~~~~~-~~a~~~gv~~--------~~l~ell~~aDvV~l~~P 161 (333)
++.|.|. |.||+.+++.|... |++|++.++.... ......+++. .+++++++++|+|+.+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 4778887 99999999999988 9999999986532 2222334332 135678889999987765
No 480
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=95.09 E-value=0.016 Score=55.52 Aligned_cols=85 Identities=11% Similarity=0.089 Sum_probs=49.0
Q ss_pred EEEEEecChHHHHHHHHHhhC----CCEEEE-EcCCCCHHHHHhc-Cccc-cChhhhccC--------------------
Q psy6348 100 TLAVLGLGRIGREVALRMQAF----GMKVIG-FDPMVSVEDAAKL-NIAS-LGLEDIWPL-------------------- 152 (333)
Q Consensus 100 tvGIIGlG~IG~~vA~~l~~~----G~~V~~-~d~~~~~~~a~~~-gv~~-~~l~ell~~-------------------- 152 (333)
++||||+|.||+.+++.+... +++|.+ +|+.. .....++ |+.. .++++++.+
T Consensus 6 ~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~-~~~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~~~~~~~ 84 (358)
T 1ebf_A 6 NVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAER-SLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLKTSPK 84 (358)
T ss_dssp EEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSB-EEECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHHHTTCSS
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECCh-hhhccccCCCCccccHHHHHhcccCCCCCHHHHHHHhhhccC
Confidence 799999999999999998875 356654 45422 1111111 3322 234444432
Q ss_pred CCEEEEecCCchhhHhhccHHHHhccCCCcEEEEccCC
Q psy6348 153 ADYITVHTPLIPQTKNLINAEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 153 aDvV~l~~P~t~~t~~li~~~~~~~mk~gailIN~aRg 190 (333)
.|+|+.|+|....... ..+.|+.|.-+|...-.
T Consensus 85 ~DvVV~~t~~~~~a~~-----~~~AL~aGkhVVtaNkk 117 (358)
T 1ebf_A 85 PVILVDNTSSAYIAGF-----YTKFVENGISIATPNKK 117 (358)
T ss_dssp CEEEEECSCCHHHHTT-----HHHHHHTTCEEECCCCG
T ss_pred CcEEEEcCCChHHHHH-----HHHHHHCCCeEEecCcc
Confidence 2899999985432221 12446677777764333
No 481
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=95.08 E-value=0.024 Score=54.81 Aligned_cols=67 Identities=16% Similarity=0.254 Sum_probs=45.8
Q ss_pred CCccccCCCEEEEEecChHHHHHHHHHhhCCCEEEEEcCCCC-HH-HHHhc-Cc---ccc---ChhhhccCCCEEEE
Q psy6348 91 YTGTELYGKTLAVLGLGRIGREVALRMQAFGMKVIGFDPMVS-VE-DAAKL-NI---ASL---GLEDIWPLADYITV 158 (333)
Q Consensus 91 ~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~-~a~~~-gv---~~~---~l~ell~~aDvV~l 158 (333)
|.+..+.++||+|+|-|..|+.+++.++.+|++|+++| ... +. ..... .. .+. .+.++++++|+|+.
T Consensus 17 ~~~~mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 17 FQGHMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp ----CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred EeccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 34555779999999999999999999999999999999 542 11 11110 11 111 35667889999875
No 482
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=95.08 E-value=0.057 Score=51.31 Aligned_cols=88 Identities=10% Similarity=-0.005 Sum_probs=59.3
Q ss_pred cCCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCCHHHHHhcCcccc------Chhhhc-----cCCCEEEEecCCc
Q psy6348 96 LYGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVSVEDAAKLNIASL------GLEDIW-----PLADYITVHTPLI 163 (333)
Q Consensus 96 l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~gv~~~------~l~ell-----~~aDvV~l~~P~t 163 (333)
-.|++|.|+|. |.+|...++.++.+|.+|++.......+.++++|...+ ++.+.+ ...|+++-++...
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~~ 242 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNV 242 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCSH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCch
Confidence 46899999999 89999999999999999998753224566777876421 121111 2378888777531
Q ss_pred hhhHhhccHHHHhcc-CCCcEEEEcc
Q psy6348 164 PQTKNLINAEVLKKC-KKGVRVVNVA 188 (333)
Q Consensus 164 ~~t~~li~~~~~~~m-k~gailIN~a 188 (333)
.+ -...+..+ +++..++.++
T Consensus 243 -~~----~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 243 -ES----TTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp -HH----HHHHHHHSCTTCEEEEESS
T ss_pred -HH----HHHHHHHhhcCCCEEEEEe
Confidence 11 13345556 5777777774
No 483
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=95.07 E-value=0.022 Score=46.22 Aligned_cols=66 Identities=18% Similarity=0.202 Sum_probs=44.1
Q ss_pred CCEEEEEecChHHHHHHHHHhhC-CCEEEEE-cCCCCHHHHHhcCcccc---Chhhhcc--CCCEEEEecCCc
Q psy6348 98 GKTLAVLGLGRIGREVALRMQAF-GMKVIGF-DPMVSVEDAAKLNIASL---GLEDIWP--LADYITVHTPLI 163 (333)
Q Consensus 98 gktvGIIGlG~IG~~vA~~l~~~-G~~V~~~-d~~~~~~~a~~~gv~~~---~l~ell~--~aDvV~l~~P~t 163 (333)
.+++.|||.|..|+.+++.+... |+++++| |.........-.|+... ++.++++ +.|.|++++|..
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g~~i~g~pV~g~~~l~~~~~~~~id~viia~~~~ 76 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDDRKKHKTTMQGITIYRPKYLERLIKKHCISTVLLAVPSA 76 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSCGGGTTCEETTEEEECGGGHHHHHHHHTCCEEEECCTTS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECCcccCCCEecCeEEECHHHHHHHHHHCCCCEEEEeCCCC
Confidence 56899999999999999999764 8998886 54322110011244333 3444443 578999999854
No 484
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.03 E-value=0.044 Score=52.40 Aligned_cols=86 Identities=14% Similarity=0.214 Sum_probs=55.6
Q ss_pred CCEEEEEec-ChHHHHHHHHHhhCC-CEEEEEcCCCCH-HHHHh------cCcc--ccChhhhccCCCEEEEecCCchhh
Q psy6348 98 GKTLAVLGL-GRIGREVALRMQAFG-MKVIGFDPMVSV-EDAAK------LNIA--SLGLEDIWPLADYITVHTPLIPQT 166 (333)
Q Consensus 98 gktvGIIGl-G~IG~~vA~~l~~~G-~~V~~~d~~~~~-~~a~~------~gv~--~~~l~ell~~aDvV~l~~P~t~~t 166 (333)
-.+|||||. |.+|+++.++|...- .++.......+. ....+ .... ..+.++++.++|++++|+|..
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~~Dvvf~alp~~--- 89 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAG--- 89 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTT---
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcCCCEEEECCCcH---
Confidence 458999985 999999999998654 466665433211 11110 1222 224556667899999999943
Q ss_pred HhhccHHHHhccCCCcEEEEccCC
Q psy6348 167 KNLINAEVLKKCKKGVRVVNVARG 190 (333)
Q Consensus 167 ~~li~~~~~~~mk~gailIN~aRg 190 (333)
..++..+.+ .|+.+|+.|.-
T Consensus 90 ---~s~~~~~~~-~g~~VIDlSsd 109 (351)
T 1vkn_A 90 ---ASYDLVREL-KGVKIIDLGAD 109 (351)
T ss_dssp ---HHHHHHTTC-CSCEEEESSST
T ss_pred ---HHHHHHHHh-CCCEEEECChh
Confidence 234444555 79999999753
No 485
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.99 E-value=0.023 Score=53.28 Aligned_cols=87 Identities=16% Similarity=0.120 Sum_probs=59.7
Q ss_pred CCCEEEEEecChHHHHHHHHHhhC-CCEEEEEcCCC-CHHHHHhcCcccc-----Chh----hhc--cCCCEEEEecCCc
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAF-GMKVIGFDPMV-SVEDAAKLNIASL-----GLE----DIW--PLADYITVHTPLI 163 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~-G~~V~~~d~~~-~~~~a~~~gv~~~-----~l~----ell--~~aDvV~l~~P~t 163 (333)
.|.++.|+|.|.+|...++.++.+ |.+|++.|+.. ..+.++++|...+ ++. ++. ...|+|+-++...
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~~ 250 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQ 250 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCCCH
Confidence 588999999999999999999988 78999999865 3456677776432 111 111 1577777776532
Q ss_pred hhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 164 PQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 164 ~~t~~li~~~~~~~mk~gailIN~a 188 (333)
. .-...++.++++..++.++
T Consensus 251 ~-----~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 251 S-----TIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp H-----HHHHHHHHEEEEEEEEECS
T ss_pred H-----HHHHHHHHHhcCCEEEEEC
Confidence 1 1134556677777777764
No 486
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=94.97 E-value=0.028 Score=51.76 Aligned_cols=63 Identities=19% Similarity=0.226 Sum_probs=43.1
Q ss_pred CEEEEEec-ChHHHHHHHHHh-hCCCEEE-EEcCCCCH----HHHH-----hcCccc-cChhhhccCCCEEEEecC
Q psy6348 99 KTLAVLGL-GRIGREVALRMQ-AFGMKVI-GFDPMVSV----EDAA-----KLNIAS-LGLEDIWPLADYITVHTP 161 (333)
Q Consensus 99 ktvGIIGl-G~IG~~vA~~l~-~~G~~V~-~~d~~~~~----~~a~-----~~gv~~-~~l~ell~~aDvV~l~~P 161 (333)
.+|+|+|+ |+||+.+++.+. .-|+++. ++|+..+. +..+ ..++.. .++++++.++|+|+-+++
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft~ 81 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTR 81 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcCC
Confidence 48999999 999999998766 5678877 66765422 1111 112222 268888889999995553
No 487
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=94.90 E-value=0.022 Score=52.76 Aligned_cols=71 Identities=10% Similarity=0.064 Sum_probs=51.2
Q ss_pred CccccCCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCCHHH--HHh-cCccc--------cChhhhcc--CCCEEE
Q psy6348 92 TGTELYGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVSVED--AAK-LNIAS--------LGLEDIWP--LADYIT 157 (333)
Q Consensus 92 ~g~~l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~--a~~-~gv~~--------~~l~ell~--~aDvV~ 157 (333)
...++.|+++.|.|. |.||+.+++.|...|++|++.++...... ... .++.. .+++++++ ..|+|+
T Consensus 14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vi 93 (330)
T 2pzm_A 14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVV 93 (330)
T ss_dssp CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEE
Confidence 456789999999998 99999999999999999999998542211 011 12221 13556777 899998
Q ss_pred EecCC
Q psy6348 158 VHTPL 162 (333)
Q Consensus 158 l~~P~ 162 (333)
.+...
T Consensus 94 h~A~~ 98 (330)
T 2pzm_A 94 HSAAA 98 (330)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 87653
No 488
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=94.88 E-value=0.038 Score=52.57 Aligned_cols=29 Identities=28% Similarity=0.492 Sum_probs=24.6
Q ss_pred EEEEEecChHHHHHHHHHhhC---CCEEEEEc
Q psy6348 100 TLAVLGLGRIGREVALRMQAF---GMKVIGFD 128 (333)
Q Consensus 100 tvGIIGlG~IG~~vA~~l~~~---G~~V~~~d 128 (333)
+|||+|+|+||+.+.+.|... +++|.+..
T Consensus 4 kVgI~G~G~IGr~v~r~l~~~~~~~~evvaIn 35 (339)
T 3b1j_A 4 RVAINGFGRIGRNFLRCWFGRQNTDLEVVAIN 35 (339)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSCCSEEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCeEEEEEe
Confidence 899999999999999998765 47887654
No 489
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=94.82 E-value=0.024 Score=53.79 Aligned_cols=86 Identities=13% Similarity=0.095 Sum_probs=50.5
Q ss_pred CEEEEEe-cChHHHHHHHHHhhC---CCEEEEEcCCCCHHH-H--HhcCccccChh-hhccCCCEEEEecCCchhhHhhc
Q psy6348 99 KTLAVLG-LGRIGREVALRMQAF---GMKVIGFDPMVSVED-A--AKLNIASLGLE-DIWPLADYITVHTPLIPQTKNLI 170 (333)
Q Consensus 99 ktvGIIG-lG~IG~~vA~~l~~~---G~~V~~~d~~~~~~~-a--~~~gv~~~~l~-ell~~aDvV~l~~P~t~~t~~li 170 (333)
.+|+|+| +|.+|+.+.+.|... .+++.++....+... . ....+...+++ +.+.++|+|+.|+|... ++...
T Consensus 4 ~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~~~~~~vDvVf~a~g~~~-s~~~a 82 (336)
T 2r00_A 4 FNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDWSQVHIALFSAGGEL-SAKWA 82 (336)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGGGCCGGGCSEEEECSCHHH-HHHHH
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCChHHhcCCCEEEECCCchH-HHHHH
Confidence 5899999 999999999988765 456766643211110 0 00111111221 24468999999998432 22221
Q ss_pred cHHHHhccCCCcEEEEccC
Q psy6348 171 NAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 171 ~~~~~~~mk~gailIN~aR 189 (333)
. ..++.|+.+|+.+.
T Consensus 83 -~---~~~~~G~~vId~s~ 97 (336)
T 2r00_A 83 -P---IAAEAGVVVIDNTS 97 (336)
T ss_dssp -H---HHHHTTCEEEECSS
T ss_pred -H---HHHHcCCEEEEcCC
Confidence 1 22456888888764
No 490
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.81 E-value=0.036 Score=52.31 Aligned_cols=45 Identities=20% Similarity=0.329 Sum_probs=36.5
Q ss_pred CCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCC-HHHHHhcCc
Q psy6348 97 YGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVS-VEDAAKLNI 141 (333)
Q Consensus 97 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~gv 141 (333)
.|+++.|.|. |.||..+++.++..|++|++.++... .+.++++|.
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga 216 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGA 216 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCC
Confidence 4889999998 99999999999999999999998642 234445553
No 491
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.81 E-value=0.059 Score=50.79 Aligned_cols=88 Identities=17% Similarity=0.102 Sum_probs=58.1
Q ss_pred CCCEEEEEecChHHHHHHHHHhhCCCE-EEEEcCCC-CHHHHHhcCcccc----------Chh----hhc--cCCCEEEE
Q psy6348 97 YGKTLAVLGLGRIGREVALRMQAFGMK-VIGFDPMV-SVEDAAKLNIASL----------GLE----DIW--PLADYITV 158 (333)
Q Consensus 97 ~gktvGIIGlG~IG~~vA~~l~~~G~~-V~~~d~~~-~~~~a~~~gv~~~----------~l~----ell--~~aDvV~l 158 (333)
.|++|.|+|.|.+|...++.++.+|.+ |++.++.. ..+.+++++-... ++. ++. ...|+|+-
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid 258 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALE 258 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEEE
Confidence 478999999999999999999999998 99988765 3344455421110 111 111 25788888
Q ss_pred ecCCchhhHhhccHHHHhccCCCcEEEEccC
Q psy6348 159 HTPLIPQTKNLINAEVLKKCKKGVRVVNVAR 189 (333)
Q Consensus 159 ~~P~t~~t~~li~~~~~~~mk~gailIN~aR 189 (333)
++... .+ -...+..++++..++.++-
T Consensus 259 ~~g~~-~~----~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 259 CTGVE-SS----IAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp CSCCH-HH----HHHHHHHSCTTCEEEECCC
T ss_pred CCCCh-HH----HHHHHHHhcCCCEEEEEcc
Confidence 77532 11 1445567788888887753
No 492
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=94.80 E-value=0.029 Score=52.85 Aligned_cols=35 Identities=29% Similarity=0.365 Sum_probs=32.1
Q ss_pred CC--CEEEEEec-ChHHHHHHHHHhhCCC-EEEEEcCCC
Q psy6348 97 YG--KTLAVLGL-GRIGREVALRMQAFGM-KVIGFDPMV 131 (333)
Q Consensus 97 ~g--ktvGIIGl-G~IG~~vA~~l~~~G~-~V~~~d~~~ 131 (333)
.| +++.|.|. |.||..+++.++..|. +|++.++..
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~ 196 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTH 196 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCH
Confidence 46 89999998 9999999999999999 999999864
No 493
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.78 E-value=0.031 Score=52.75 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=32.1
Q ss_pred CCCEEEEEe-cChHHHHHHHHHhhCCCEEEEEcCCC
Q psy6348 97 YGKTLAVLG-LGRIGREVALRMQAFGMKVIGFDPMV 131 (333)
Q Consensus 97 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~ 131 (333)
.|+++.|+| .|.||..+++.++..|.+|++.++..
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~ 197 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQ 197 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 478999999 79999999999999999999999854
No 494
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.77 E-value=0.031 Score=52.44 Aligned_cols=35 Identities=34% Similarity=0.442 Sum_probs=32.1
Q ss_pred CCCEEEEEecC-hHHHHHHHHHhhC-CCEEEEEcCCC
Q psy6348 97 YGKTLAVLGLG-RIGREVALRMQAF-GMKVIGFDPMV 131 (333)
Q Consensus 97 ~gktvGIIGlG-~IG~~vA~~l~~~-G~~V~~~d~~~ 131 (333)
.|+++.|+|.| .||..+++.++.. |.+|++.++..
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~ 206 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE 206 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSH
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCH
Confidence 57899999999 9999999999998 99999999754
No 495
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=94.77 E-value=0.048 Score=51.78 Aligned_cols=30 Identities=27% Similarity=0.484 Sum_probs=25.2
Q ss_pred EEEEEecChHHHHHHHHHhhC-CCEEEEEcC
Q psy6348 100 TLAVLGLGRIGREVALRMQAF-GMKVIGFDP 129 (333)
Q Consensus 100 tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d~ 129 (333)
+|||+|+|+||+.+.+.|... .++|.+...
T Consensus 3 kVgI~G~G~iGr~l~R~l~~~~~veivain~ 33 (334)
T 3cmc_O 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVND 33 (334)
T ss_dssp EEEEESCSHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHhCCCCeEEEEEeC
Confidence 799999999999999988764 578876644
No 496
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=94.73 E-value=0.052 Score=49.34 Aligned_cols=66 Identities=14% Similarity=0.125 Sum_probs=49.4
Q ss_pred CCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCCC---HHHH------HhcCcccc--------ChhhhccCCCEEEEe
Q psy6348 98 GKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMVS---VEDA------AKLNIASL--------GLEDIWPLADYITVH 159 (333)
Q Consensus 98 gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~---~~~a------~~~gv~~~--------~l~ell~~aDvV~l~ 159 (333)
.++|.|.|. |.+|+.+++.|...|++|++.+|..+ .+.. ...+++.+ ++.++++++|+|+.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 468999995 99999999999999999999998753 2222 12344322 456788999999988
Q ss_pred cCCc
Q psy6348 160 TPLI 163 (333)
Q Consensus 160 ~P~t 163 (333)
.+..
T Consensus 84 a~~~ 87 (313)
T 1qyd_A 84 LAGG 87 (313)
T ss_dssp CCCS
T ss_pred Cccc
Confidence 7643
No 497
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.72 E-value=0.028 Score=52.46 Aligned_cols=35 Identities=20% Similarity=0.272 Sum_probs=32.0
Q ss_pred CCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEcCCC
Q psy6348 97 YGKTLAVLGL-GRIGREVALRMQAFGMKVIGFDPMV 131 (333)
Q Consensus 97 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~ 131 (333)
.|+++.|+|. |.||..+++.++..|++|++.++..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~ 180 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTE 180 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4789999995 9999999999999999999999864
No 498
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=94.68 E-value=0.11 Score=46.97 Aligned_cols=73 Identities=16% Similarity=0.161 Sum_probs=47.1
Q ss_pred EEEEEec-ChHHHHHHHHHhhC-CCEEEE-EcCCCCHHHHHhcCccccChhhhcc-CCCEEEEecCCchhhHhhccHHHH
Q psy6348 100 TLAVLGL-GRIGREVALRMQAF-GMKVIG-FDPMVSVEDAAKLNIASLGLEDIWP-LADYITVHTPLIPQTKNLINAEVL 175 (333)
Q Consensus 100 tvGIIGl-G~IG~~vA~~l~~~-G~~V~~-~d~~~~~~~a~~~gv~~~~l~ell~-~aDvV~l~~P~t~~t~~li~~~~~ 175 (333)
+|+|+|+ |+||+.+++.+... |+++.+ +|+. .++++++. .+|+|+-+.+. +.+... ..
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~-------------~dl~~~~~~~~DvvIDfT~p-~a~~~~----~~ 63 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG-------------DPLSLLTDGNTEVVIDFTHP-DVVMGN----LE 63 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT-------------CCTHHHHHTTCCEEEECSCT-TTHHHH----HH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC-------------CCHHHHhccCCcEEEEccCh-HHHHHH----HH
Confidence 7999996 99999999998765 899874 5653 23555554 79999866542 222222 11
Q ss_pred hccCCCcEEEEccCC
Q psy6348 176 KKCKKGVRVVNVARG 190 (333)
Q Consensus 176 ~~mk~gailIN~aRg 190 (333)
..++.|.-+|-.+.|
T Consensus 64 ~a~~~g~~~VigTTG 78 (245)
T 1p9l_A 64 FLIDNGIHAVVGTTG 78 (245)
T ss_dssp HHHHTTCEEEECCCC
T ss_pred HHHHcCCCEEEcCCC
Confidence 224556656665556
No 499
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=94.62 E-value=0.14 Score=48.13 Aligned_cols=86 Identities=13% Similarity=0.188 Sum_probs=57.6
Q ss_pred CCCEEEEEec-ChHHHHHHHHHhhCCCEEEEEc-CCCC----HHHHHhcCcccc-C--------hhhhcc---CCCEEEE
Q psy6348 97 YGKTLAVLGL-GRIGREVALRMQAFGMKVIGFD-PMVS----VEDAAKLNIASL-G--------LEDIWP---LADYITV 158 (333)
Q Consensus 97 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~d-~~~~----~~~a~~~gv~~~-~--------l~ell~---~aDvV~l 158 (333)
.|.+|.|+|. |.+|...++.++.+|.+|++.. +... .+.++++|...+ + +.++.. ..|+|+-
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid 246 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALN 246 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEE
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEE
Confidence 5889999998 9999999999999999887764 3322 245667776422 2 222222 3788887
Q ss_pred ecCCchhhHhhccHHHHhccCCCcEEEEcc
Q psy6348 159 HTPLIPQTKNLINAEVLKKCKKGVRVVNVA 188 (333)
Q Consensus 159 ~~P~t~~t~~li~~~~~~~mk~gailIN~a 188 (333)
++. .+.+ .+.++.++++..++.++
T Consensus 247 ~~g-~~~~-----~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 247 CVG-GKSS-----TELLRQLARGGTMVTYG 270 (357)
T ss_dssp SSC-HHHH-----HHHHTTSCTTCEEEECC
T ss_pred CCC-cHHH-----HHHHHhhCCCCEEEEEe
Confidence 765 2221 23567788887777764
No 500
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=94.59 E-value=0.05 Score=51.52 Aligned_cols=34 Identities=24% Similarity=0.490 Sum_probs=26.5
Q ss_pred EEEEEecChHHHHHHHHHhhC-CCEEEEEcCCCCH
Q psy6348 100 TLAVLGLGRIGREVALRMQAF-GMKVIGFDPMVSV 133 (333)
Q Consensus 100 tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d~~~~~ 133 (333)
+|||+|+|+||+.+.+.+... .++|.+.......
T Consensus 3 kVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~~~~ 37 (330)
T 1gad_O 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDA 37 (330)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSCH
T ss_pred EEEEECcCHHHHHHHHHHHcCCCeEEEEEcCCCCh
Confidence 799999999999999988653 5788776544333
Done!