Query psy6349
Match_columns 145
No_of_seqs 118 out of 1951
Neff 11.0
Searched_HMMs 29240
Date Sat Aug 17 00:08:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6349.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6349hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vj3_A Neurogenic locus notch 99.8 8.4E-19 2.9E-23 105.5 13.0 116 4-120 2-118 (135)
2 1z1y_A Ookinete surface protei 99.8 1.5E-20 5.3E-25 118.9 5.4 132 11-143 7-172 (186)
3 4d90_A EGF-like repeat and dis 99.7 1.7E-16 5.8E-21 96.3 10.4 104 13-116 4-129 (143)
4 2vj3_A Neurogenic locus notch 99.7 7.5E-16 2.6E-20 92.6 11.2 98 45-142 4-115 (135)
5 4d90_A EGF-like repeat and dis 99.6 1.5E-14 5.1E-19 87.7 8.9 96 48-143 2-130 (143)
6 1z1y_A Ookinete surface protei 99.5 7.2E-15 2.5E-19 92.8 4.7 113 3-116 40-171 (186)
7 2bou_A EGF-like module contain 99.5 5.9E-14 2E-18 85.1 6.6 97 15-116 7-130 (143)
8 1yo8_A Thrombospondin-2; EGF, 99.5 2.4E-13 8.2E-18 99.0 10.6 107 7-116 3-140 (634)
9 1uzk_A Fibrillin-1; glycoprote 99.4 3.3E-14 1.1E-18 87.9 1.2 123 6-144 2-157 (162)
10 1yo8_A Thrombospondin-2; EGF, 99.4 1.8E-12 6E-17 94.6 9.6 97 45-142 2-140 (634)
11 2bou_A EGF-like module contain 99.4 2.1E-12 7.3E-17 78.2 8.1 89 52-144 7-132 (143)
12 1dx5_I Thrombomodulin; serine 99.3 2.1E-12 7.4E-17 75.7 5.0 99 6-115 3-110 (118)
13 1dx5_I Thrombomodulin; serine 99.2 1.7E-11 5.8E-16 71.8 5.7 92 45-144 3-113 (118)
14 1emn_A Fibrillin; extracellula 99.2 2.5E-11 8.7E-16 66.5 6.0 71 4-77 2-75 (82)
15 1tpg_A T-plasminogen activator 99.2 2.7E-11 9.1E-16 67.7 5.3 79 28-116 1-82 (91)
16 4fbr_A Lectin, myxobacterial h 99.2 1.3E-14 4.4E-19 95.2 -10.7 100 16-115 39-197 (267)
17 1lmj_A Fibrillin 1; EGF, calci 99.2 4.3E-11 1.5E-15 66.2 4.6 70 6-77 2-78 (86)
18 3fcs_B Integrin beta-3; beta p 99.1 8.6E-11 2.9E-15 86.8 6.5 121 10-142 435-596 (690)
19 2ygq_A WIF-1, WNT inhibitory f 99.1 3.9E-10 1.3E-14 76.8 6.8 109 15-141 153-271 (324)
20 2ygq_A WIF-1, WNT inhibitory f 99.0 2.9E-10 9.9E-15 77.4 5.0 109 16-142 186-304 (324)
21 1emn_A Fibrillin; extracellula 99.0 1E-09 3.6E-14 60.0 6.3 69 45-116 4-76 (82)
22 1x7a_L Coagulation factor IX, 99.0 6.6E-10 2.3E-14 67.3 5.8 69 45-114 47-116 (146)
23 1z6c_A Vitamin K-dependent pro 99.0 2.4E-10 8.3E-15 63.3 3.5 70 7-80 3-76 (87)
24 2vj2_A Jagged-1; signalling, p 99.0 6E-10 2E-14 69.2 5.5 106 20-142 44-165 (169)
25 2w86_A Fibrillin-1, fibrillin1 99.0 3.6E-11 1.2E-15 73.1 -0.1 34 6-41 3-36 (147)
26 2w86_A Fibrillin-1, fibrillin1 99.0 1.3E-10 4.3E-15 70.6 2.0 100 44-144 2-142 (147)
27 1aut_L Activated protein C; se 99.0 1.9E-09 6.5E-14 62.7 6.3 73 5-77 4-85 (114)
28 1lmj_A Fibrillin 1; EGF, calci 99.0 1E-09 3.6E-14 60.6 4.8 69 45-116 2-79 (86)
29 2vj2_A Jagged-1; signalling, p 98.9 7.6E-10 2.6E-14 68.7 3.8 88 18-116 75-165 (169)
30 1aut_L Activated protein C; se 98.9 2.4E-09 8.1E-14 62.2 5.3 72 45-116 5-86 (114)
31 1tpg_A T-plasminogen activator 98.9 3.5E-09 1.2E-13 59.0 5.6 63 21-85 24-89 (91)
32 2c4f_L Coagulation factor VII 98.9 2.6E-09 9E-14 64.4 5.5 74 6-81 46-128 (142)
33 1x7a_L Coagulation factor IX, 98.9 1.8E-09 6.1E-14 65.4 4.6 71 4-77 45-117 (146)
34 1nfu_B Coagulation factor XA, 98.9 4.2E-10 1.4E-14 71.1 1.9 77 3-81 38-120 (195)
35 2c4f_L Coagulation factor VII 98.8 5.2E-09 1.8E-13 63.1 5.4 71 45-115 46-120 (142)
36 3fcs_B Integrin beta-3; beta p 98.8 1E-08 3.5E-13 75.9 7.0 90 15-116 493-596 (690)
37 2vh0_B Activated factor XA lig 98.8 1.8E-09 6.2E-14 64.5 2.2 70 45-114 41-111 (134)
38 1nfu_B Coagulation factor XA, 98.8 1.2E-09 4.2E-14 69.0 1.5 71 45-115 41-112 (195)
39 3h5c_B Vitamin K-dependent pro 98.8 9.8E-09 3.3E-13 69.7 6.0 69 6-78 4-76 (317)
40 2w2n_E LDL receptor, low-densi 98.8 3.5E-09 1.2E-13 60.8 2.6 80 32-116 17-100 (107)
41 2vh0_B Activated factor XA lig 98.7 2.4E-09 8.4E-14 63.9 1.5 72 4-77 39-112 (134)
42 4fbr_A Lectin, myxobacterial h 98.7 6.8E-12 2.3E-16 82.4 -10.6 119 22-141 6-197 (267)
43 3k6s_B Integrin beta-2; cell r 98.7 1.2E-08 3.9E-13 75.5 4.9 112 15-142 435-588 (687)
44 1z6c_A Vitamin K-dependent pro 98.7 9.2E-09 3.1E-13 56.8 2.8 66 45-114 2-75 (87)
45 3h5c_B Vitamin K-dependent pro 98.6 1E-07 3.4E-12 64.7 6.3 70 45-116 4-76 (317)
46 2gy5_A Angiopoietin-1 receptor 98.6 2.9E-07 9.9E-12 64.9 8.6 101 30-142 186-316 (423)
47 2w2n_E LDL receptor, low-densi 98.5 2.3E-08 8E-13 57.3 1.5 69 6-78 28-100 (107)
48 3u7u_G Neuregulin 1; signaling 98.5 1.8E-07 6.2E-12 46.8 4.0 44 40-83 2-50 (55)
49 1uzk_A Fibrillin-1; glycoprote 98.5 7.7E-09 2.6E-13 63.7 -1.5 94 45-142 2-113 (162)
50 3p5b_L Low density lipoprotein 98.4 3.9E-07 1.3E-11 63.8 5.2 66 9-78 2-71 (400)
51 3m0c_C LDL receptor, low-densi 98.3 2.2E-06 7.6E-11 64.8 6.7 100 15-116 279-383 (791)
52 1n7d_A LDL receptor, low-densi 98.2 3.5E-06 1.2E-10 63.0 7.2 99 15-116 261-365 (699)
53 1n7d_A LDL receptor, low-densi 98.2 6E-06 2.1E-10 61.7 8.0 61 84-144 294-367 (699)
54 2gy5_A Angiopoietin-1 receptor 98.2 7.8E-06 2.7E-10 57.6 8.1 94 16-116 204-316 (423)
55 3p5b_L Low density lipoprotein 98.2 2.7E-06 9.2E-11 59.5 5.4 67 47-116 1-71 (400)
56 3v65_B Low-density lipoprotein 98.2 5.4E-07 1.8E-11 62.8 1.6 67 6-76 2-73 (386)
57 1edm_B Factor IX; epidermal gr 98.1 4.7E-06 1.6E-10 38.6 4.4 31 48-78 5-35 (39)
58 3v65_B Low-density lipoprotein 98.1 7.3E-07 2.5E-11 62.1 1.3 67 45-114 2-73 (386)
59 2p28_B Integrin beta-2; hybrid 98.0 6.4E-06 2.2E-10 52.9 3.9 90 15-116 96-210 (217)
60 3u7u_G Neuregulin 1; signaling 97.9 1.5E-05 5E-10 39.8 3.5 43 77-120 1-48 (55)
61 3k6s_B Integrin beta-2; cell r 97.8 1.4E-05 4.8E-10 59.4 3.6 89 16-116 483-588 (687)
62 1edm_B Factor IX; epidermal gr 97.8 4.1E-05 1.4E-09 35.3 3.8 33 84-116 3-35 (39)
63 1egf_A Epidermal growth factor 97.8 6.2E-05 2.1E-09 37.2 4.6 27 16-42 13-42 (53)
64 1a3p_A Epidermal growth factor 97.8 4E-05 1.4E-09 36.6 3.8 29 16-44 10-41 (45)
65 1egf_A Epidermal growth factor 97.7 0.00011 3.9E-09 36.3 5.2 34 52-85 12-47 (53)
66 1a3p_A Epidermal growth factor 97.7 7.4E-05 2.5E-09 35.6 4.3 31 53-83 10-42 (45)
67 1hae_A Heregulin-alpha; growth 97.6 0.00011 3.6E-09 37.7 4.5 38 14-51 11-54 (63)
68 1hae_A Heregulin-alpha; growth 97.6 4.3E-05 1.5E-09 39.2 2.7 42 47-88 7-53 (63)
69 2k2s_B Micronemal protein 6; m 97.5 2.1E-05 7.2E-10 40.1 1.0 36 46-81 11-49 (61)
70 3m0c_C LDL receptor, low-densi 97.5 8.2E-05 2.8E-09 56.4 4.4 54 21-76 325-381 (791)
71 1k36_A Epiregulin; EGF-like fo 97.5 0.00014 4.8E-09 34.8 3.6 29 15-43 12-42 (46)
72 2k2s_B Micronemal protein 6; m 97.4 0.00011 3.6E-09 37.5 2.5 44 83-127 10-57 (61)
73 2wg3_C Hedgehog-interacting pr 97.3 5.7E-05 2E-09 53.9 1.5 77 30-120 378-454 (463)
74 1nql_B Epidermal growth factor 97.2 0.00027 9.1E-09 34.9 2.9 31 14-44 11-44 (53)
75 1k36_A Epiregulin; EGF-like fo 97.2 0.00034 1.2E-08 33.4 2.9 35 46-81 3-42 (46)
76 2jkh_L Factor X light chain; p 97.1 0.00043 1.5E-08 34.4 2.9 39 9-49 3-45 (55)
77 2wg3_C Hedgehog-interacting pr 97.1 8.6E-05 2.9E-09 53.0 0.1 64 69-142 379-451 (463)
78 3ca7_A Protein spitz; argos, E 96.8 0.00019 6.5E-09 35.3 0.0 29 53-81 15-47 (52)
79 2jkh_L Factor X light chain; p 96.8 0.00048 1.6E-08 34.2 1.5 20 123-142 14-33 (55)
80 1apq_A Complement protease C1R 96.7 0.00075 2.6E-08 33.1 1.9 21 122-142 24-44 (53)
81 3ca7_A Protein spitz; argos, E 96.5 0.0016 5.6E-08 31.8 2.3 29 15-43 14-47 (52)
82 1apq_A Complement protease C1R 96.5 0.004 1.4E-07 30.3 3.6 24 15-39 20-43 (53)
83 3zyj_B Netrin-G1; cell adhesio 96.3 0.0034 1.2E-07 44.2 3.7 89 20-116 304-394 (426)
84 1kig_L Factor XA; glycoprotein 96.3 0.00065 2.2E-08 33.2 -0.0 21 123-143 11-31 (51)
85 1nql_B Epidermal growth factor 96.3 0.0032 1.1E-07 30.9 2.5 32 51-82 11-44 (53)
86 1gl4_A Nidogen-1, entactin; im 96.3 0.00074 2.5E-08 44.9 0.3 38 6-43 4-44 (285)
87 1kli_L Factor VIIA; extrinsic 96.3 0.004 1.4E-07 32.4 3.0 42 6-49 4-50 (69)
88 2kl7_A Fibulin-4; secreted, ca 96.3 0.0068 2.3E-07 31.7 3.8 33 6-38 2-36 (71)
89 1g1s_A P-selectin; selectin, l 96.2 0.0026 8.9E-08 38.7 2.3 42 47-89 120-161 (162)
90 1kig_L Factor XA; glycoprotein 96.1 0.0032 1.1E-07 30.7 2.0 33 15-49 6-42 (51)
91 2wph_E Coagulation factor IXA 96.1 0.0031 1.1E-07 31.7 2.0 20 123-142 12-32 (59)
92 3ltf_D Protein spitz; receptor 96.0 0.004 1.4E-07 31.2 2.1 28 16-43 15-47 (58)
93 2fd6_A Urokinase-type plasmino 96.0 0.012 4E-07 34.2 4.4 56 16-81 2-62 (122)
94 2bz6_L Blood coagulation facto 96.0 0.0029 1E-07 31.1 1.5 21 123-143 12-33 (53)
95 1klo_A Laminin; glycoprotein; 95.8 0.013 4.4E-07 35.8 4.2 28 16-43 2-33 (162)
96 4aqs_A Laminin subunit beta-1; 95.8 0.0067 2.3E-07 44.0 3.2 15 67-81 460-474 (525)
97 2p28_B Integrin beta-2; hybrid 95.8 0.0071 2.4E-07 38.8 2.9 60 14-81 142-213 (217)
98 2rnl_A Amphiregulin; AR, color 95.7 0.012 4E-07 28.5 3.0 29 15-43 18-48 (50)
99 1iox_A Betacellulin; EGF-like 95.7 0.0083 2.8E-07 29.1 2.5 29 15-43 14-44 (50)
100 2bz6_L Blood coagulation facto 95.7 0.01 3.5E-07 29.1 2.7 32 16-49 8-44 (53)
101 3e50_C Protransforming growth 95.6 0.016 5.4E-07 28.0 3.2 30 14-43 13-44 (50)
102 1gl4_A Nidogen-1, entactin; im 95.6 0.0068 2.3E-07 40.4 2.4 34 83-116 4-39 (285)
103 1g1s_A P-selectin; selectin, l 95.6 0.006 2E-07 37.0 2.1 34 86-120 121-154 (162)
104 2kl7_A Fibulin-4; secreted, ca 95.4 0.018 6E-07 30.1 3.3 27 45-71 2-30 (71)
105 1kli_L Factor VIIA; extrinsic 95.3 0.011 3.7E-07 30.7 2.2 34 83-116 4-38 (69)
106 1ob1_C Major merozoite surface 95.3 0.043 1.5E-06 30.4 4.6 69 47-115 5-84 (99)
107 1xdt_R Hbegf, heparin-binding 95.1 0.011 3.6E-07 31.5 1.8 30 14-43 45-76 (79)
108 1q4g_A Prostaglandin G/H synth 95.1 0.018 6.1E-07 42.1 3.6 35 47-81 3-39 (553)
109 1n1i_A Merozoite surface prote 95.0 0.12 4.3E-06 28.9 5.9 69 47-116 11-86 (105)
110 1n1i_A Merozoite surface prote 94.7 0.27 9.2E-06 27.5 7.3 59 16-75 17-83 (105)
111 3nt1_A Prostaglandin-endoperox 94.7 0.029 1E-06 41.3 3.8 34 48-81 3-38 (587)
112 1q4g_A Prostaglandin G/H synth 94.3 0.03 1E-06 41.0 3.0 34 13-46 6-42 (553)
113 3ltf_D Protein spitz; receptor 94.2 0.031 1.1E-06 27.9 2.1 30 53-82 15-48 (58)
114 1ob1_C Major merozoite surface 93.9 0.21 7.3E-06 27.7 5.2 59 16-74 11-81 (99)
115 3cfw_A L-selectin; EGF, cell a 93.6 0.079 2.7E-06 32.1 3.6 39 49-88 122-160 (164)
116 3nt1_A Prostaglandin-endoperox 93.0 0.087 3E-06 38.8 3.6 32 13-44 5-39 (587)
117 2wph_E Coagulation factor IXA 92.6 0.11 3.7E-06 26.0 2.6 22 95-116 10-32 (59)
118 1szb_A Mannose binding lectin- 91.9 0.077 2.7E-06 32.4 1.9 24 119-143 137-160 (170)
119 2fd6_A Urokinase-type plasmino 91.2 0.5 1.7E-05 27.3 4.8 36 53-88 2-41 (122)
120 3cfw_A L-selectin; EGF, cell a 90.8 0.22 7.4E-06 30.1 3.1 40 87-127 122-162 (164)
121 4aqs_A Laminin subunit beta-1; 90.4 0.088 3E-06 38.2 1.3 15 29-43 460-474 (525)
122 1szb_A Mannose binding lectin- 89.7 0.44 1.5E-05 29.0 3.8 18 59-76 140-157 (170)
123 3asi_A Neurexin-1-alpha; beta- 89.5 0.55 1.9E-05 32.8 4.6 37 46-82 185-222 (410)
124 1g1t_A E-selectin; EGF, adhesi 88.8 0.19 6.6E-06 30.0 1.7 28 89-116 124-151 (157)
125 1nzi_A Complement C1S componen 88.7 0.23 7.8E-06 29.8 2.0 23 122-144 130-152 (159)
126 3zyj_B Netrin-G1; cell adhesio 87.3 0.57 1.9E-05 33.2 3.5 24 58-81 304-327 (426)
127 2i9a_A Urokinase-type plasmino 86.1 0.91 3.1E-05 27.1 3.5 31 16-46 14-48 (145)
128 2ygo_A WIF-1, WNT inhibitory f 85.4 0.89 3.1E-05 28.4 3.3 26 53-81 154-179 (188)
129 3asi_A Neurexin-1-alpha; beta- 85.2 1 3.6E-05 31.4 4.0 32 12-43 188-221 (410)
130 3qcw_A Neurexin-1-alpha; synap 83.2 1.4 4.6E-05 35.6 4.3 36 47-82 1018-1054(1245)
131 3v64_C Agrin; beta propeller, 83.1 0.51 1.7E-05 32.2 1.7 18 97-114 13-30 (349)
132 3v64_C Agrin; beta propeller, 79.9 0.8 2.7E-05 31.2 1.7 28 9-38 3-30 (349)
133 1g1t_A E-selectin; EGF, adhesi 79.8 0.69 2.3E-05 27.5 1.3 26 117-142 125-151 (157)
134 3f1s_B Vitamin K-dependent pro 79.8 1.3 4.5E-05 29.3 2.7 30 8-38 3-33 (283)
135 3f1s_B Vitamin K-dependent pro 77.9 1 3.4E-05 29.8 1.7 19 57-75 14-32 (283)
136 2ygo_A WIF-1, WNT inhibitory f 77.1 2.7 9.2E-05 26.2 3.3 26 91-120 154-179 (188)
137 2i9a_A Urokinase-type plasmino 73.7 4.8 0.00016 23.9 3.7 32 53-84 14-48 (145)
138 3qcw_A Neurexin-1-alpha; synap 72.6 3.9 0.00013 33.1 4.0 37 46-82 619-656 (1245)
139 1nzi_A Complement C1S componen 72.4 6.3 0.00021 23.3 4.1 19 58-76 130-148 (159)
140 1ijq_A LDL receptor, low-densi 64.5 5.4 0.00018 26.6 2.9 22 123-144 283-310 (316)
141 3sov_A LRP-6, low-density lipo 64.3 6.6 0.00022 26.4 3.3 22 123-144 280-303 (318)
142 3s94_A LRP-6, low-density lipo 59.8 5.3 0.00018 29.7 2.4 23 122-144 590-612 (619)
143 4a0p_A LRP6, LRP-6, low-densit 59.6 5.2 0.00018 29.8 2.3 21 123-143 278-299 (628)
144 4a0p_A LRP6, LRP-6, low-densit 54.3 9.1 0.00031 28.5 2.8 34 83-116 264-298 (628)
145 3fby_A COMP, cartilage oligome 54.1 14 0.00046 27.2 3.5 32 8-39 19-53 (551)
146 3sov_A LRP-6, low-density lipo 53.1 17 0.00059 24.3 3.8 24 58-81 279-308 (318)
147 3fby_A COMP, cartilage oligome 49.7 12 0.0004 27.6 2.6 28 89-116 26-54 (551)
148 2e26_A Reelin, reeler protein; 45.6 7 0.00024 29.7 1.1 45 32-82 521-565 (725)
149 3dem_A Complement factor MAsp- 44.6 11 0.00037 24.7 1.8 24 118-142 133-156 (278)
150 1nt0_A MAsp2, mannose-binding 43.7 8.9 0.0003 25.3 1.3 22 122-143 135-156 (286)
151 3s94_A LRP-6, low-density lipo 43.5 12 0.00042 27.7 2.1 32 85-116 579-610 (619)
152 2e26_A Reelin, reeler protein; 43.2 6 0.00021 30.1 0.4 41 70-116 521-561 (725)
153 1b9w_A Protein (merozoite surf 36.2 54 0.0019 17.9 5.1 69 47-115 5-80 (95)
154 2p26_A Integrin beta-2; hybrid 30.1 45 0.0015 22.2 2.9 14 68-81 208-221 (280)
155 3fl7_A Ephrin receptor; ATP-bi 27.1 28 0.00097 25.5 1.7 14 127-140 306-319 (536)
156 1ccv_A AMCI, chymotrypsin inhi 25.0 23 0.00078 16.9 0.7 11 133-143 36-46 (56)
157 3g5c_A ADAM 22; alpha/beta fol 23.7 33 0.0011 25.0 1.5 25 16-43 455-480 (510)
158 3ssb_I IMPI alpha, inducible m 22.4 25 0.00085 14.9 0.4 10 133-142 7-16 (32)
No 1
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.82 E-value=8.4e-19 Score=105.51 Aligned_cols=116 Identities=42% Similarity=1.002 Sum_probs=102.3
Q ss_pred eeecCCCCCCCCCCC-CCEeeeCCCceeeecCCCcccCCCCccCCCCCCCCCCCCCeeeeCCCceEEeCCCCcccCCccc
Q psy6349 4 LIVSSPGLKREALCH-NGTCEDFGNSHRCHCMEGYTGSYCSIEINECESDPCQNGATCQDLIGGYSCQCARGFQGQNCEL 82 (145)
Q Consensus 4 ~~~~~~~~~~~~~c~-~~~c~~~~~~~~C~c~~g~~~~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~~ 82 (145)
+.++++|....++|. ++.|++..++|.|.|.+||.|..|+.++++|...+|..++.|++..++|.|.|.++|.|..|..
T Consensus 2 c~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~ 81 (135)
T 2vj3_A 2 AQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEV 81 (135)
T ss_dssp -CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCE
T ss_pred CcccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCccee
Confidence 346778877788997 4899999999999999999999997678899989999999999999999999999999999976
Q ss_pred cCCCCcCCCCCCCCEEeeCCCCeEeeCCCCCccCCCCC
Q psy6349 83 NVDDCKPNPCQNGGICHDLINHFSCSCPSGLKREALCH 120 (145)
Q Consensus 83 ~~~~c~~~~~~~~~~c~~~~~~~~C~c~~g~~~~~~C~ 120 (145)
++++|...+|..++.|++..+.|.|.|++||.+. .|.
T Consensus 82 ~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~-~C~ 118 (135)
T 2vj3_A 82 NTDECASSPCLHNGRCLDKINEFQCECPTGFTGH-LCQ 118 (135)
T ss_dssp ECCTTTTCCSTTTCEEEECSSCEEEECCTTEESS-SSC
T ss_pred cCCcccCCCcCCCCEeECCCCCeEEECCCCCcCC-ccC
Confidence 7888988889999999999999999999999985 453
No 2
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.81 E-value=1.5e-20 Score=118.91 Aligned_cols=132 Identities=26% Similarity=0.595 Sum_probs=109.6
Q ss_pred CCCCCCCCCCEeeeCCCceeeecCCCcccC---CCCccCCCCC----CCCCCCCCeeeeCC-----CceEEeCCCCcccC
Q psy6349 11 LKREALCHNGTCEDFGNSHRCHCMEGYTGS---YCSIEINECE----SDPCQNGATCQDLI-----GGYSCQCARGFQGQ 78 (145)
Q Consensus 11 ~~~~~~c~~~~c~~~~~~~~C~c~~g~~~~---~c~~~~~~c~----~~~c~~~~~c~~~~-----~~~~c~c~~g~~g~ 78 (145)
....++|.|+.|++..++|+|.|.+||.+. .|+ ++++|. ..+|..++.|++.. ++|.|.|.+||.+.
T Consensus 7 ~~~~~pC~ng~C~~~~g~~~C~C~~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~ 85 (186)
T 1z1y_A 7 VTVDTICXNGQLVQMSNHFXCMCNEGLVHLSENTCE-EXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLX 85 (186)
T ss_dssp CCTTCCCBTEEEEECSSCEEEEECTTEEEEETTEEE-ECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEE
T ss_pred cCCCCCCCCCEeECCCCCeEeECCCCCccCCCCccC-CCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccC
Confidence 345678888899999999999999999876 785 778897 67788888999988 89999999999976
Q ss_pred CccccCCCCcCCCCCCCCEEe----eCCCCeEeeCCCCCcc-----C-----------CCC-C-CCeeeeCCCceeEecC
Q psy6349 79 NCELNVDDCKPNPCQNGGICH----DLINHFSCSCPSGLKR-----E-----------ALC-H-NGTCEDFGNSHRCHCI 136 (145)
Q Consensus 79 ~c~~~~~~c~~~~~~~~~~c~----~~~~~~~C~c~~g~~~-----~-----------~~C-~-~~~c~~~~g~~~c~c~ 136 (145)
.+.-.+++|...+|..++.|+ +..++|.|.|++||.+ . ..| . ++.|.+..++|+|.|+
T Consensus 86 ~~~C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~~C~~~~~~C~n~~g~y~C~C~ 165 (186)
T 1z1y_A 86 EDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCM 165 (186)
T ss_dssp TTEEEEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCCCCCCTTTEEEEEETTEEEEEEC
T ss_pred CCCCCCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCcccccccccCcceecCCCCeeeECC
Confidence 443236788777888889998 6777899999999987 1 246 4 6799999999999999
Q ss_pred CCCCcCC
Q psy6349 137 CWDDLRN 143 (145)
Q Consensus 137 ~~~~~~~ 143 (145)
+||.+..
T Consensus 166 ~G~~g~~ 172 (186)
T 1z1y_A 166 EGFTFDX 172 (186)
T ss_dssp TTCEEET
T ss_pred CCCccCc
Confidence 9998765
No 3
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.71 E-value=1.7e-16 Score=96.35 Aligned_cols=104 Identities=40% Similarity=1.043 Sum_probs=86.2
Q ss_pred CCCCCC-CCEeeeCC--CceeeecCCCcccCCCCc------------cCCCCCCCCCCCCCeee-------eCCCceEEe
Q psy6349 13 REALCH-NGTCEDFG--NSHRCHCMEGYTGSYCSI------------EINECESDPCQNGATCQ-------DLIGGYSCQ 70 (145)
Q Consensus 13 ~~~~c~-~~~c~~~~--~~~~C~c~~g~~~~~c~~------------~~~~c~~~~c~~~~~c~-------~~~~~~~c~ 70 (145)
...+|. ++.|++.. +.|.|.|.+||+|..|+. .+++|...+|..++.|+ +..+.|.|.
T Consensus 4 ~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~ 83 (143)
T 4d90_A 4 DPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCK 83 (143)
T ss_dssp CSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEE
T ss_pred CCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeE
Confidence 456786 48999765 579999999999998863 34567778898889998 455789999
Q ss_pred CCCCcccCCccccCCCCcCCCCCCCCEEeeCCCCeEeeCCCCCccC
Q psy6349 71 CARGFQGQNCELNVDDCKPNPCQNGGICHDLINHFSCSCPSGLKRE 116 (145)
Q Consensus 71 c~~g~~g~~c~~~~~~c~~~~~~~~~~c~~~~~~~~C~c~~g~~~~ 116 (145)
|.++|.|..|..++++|...+|..++.|++..++|.|.|++||.+.
T Consensus 84 C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~ 129 (143)
T 4d90_A 84 CPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGR 129 (143)
T ss_dssp CCTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBST
T ss_pred CcCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccC
Confidence 9999999999767889988889999999999999999999999986
No 4
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.68 E-value=7.5e-16 Score=92.57 Aligned_cols=98 Identities=36% Similarity=0.932 Sum_probs=85.9
Q ss_pred cCCCCC--CCCCCCCCeeeeCCCceEEeCCCCcccCCccccCCCCcCCCCCCCCEEeeCCCCeEeeCCCCCccC------
Q psy6349 45 EINECE--SDPCQNGATCQDLIGGYSCQCARGFQGQNCELNVDDCKPNPCQNGGICHDLINHFSCSCPSGLKRE------ 116 (145)
Q Consensus 45 ~~~~c~--~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~~~~~~c~~~~~~~~~~c~~~~~~~~C~c~~g~~~~------ 116 (145)
++++|. ..+|..++.|++..++|.|.|.++|.|..|..++++|...+|..++.|++..++|.|.|++||.+.
T Consensus 4 dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~ 83 (135)
T 2vj3_A 4 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNT 83 (135)
T ss_dssp CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEEC
T ss_pred ccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceecC
Confidence 678887 578988999999999999999999999999767888988889989999999999999999999864
Q ss_pred -----CCCC-CCeeeeCCCceeEecCCCCCcC
Q psy6349 117 -----ALCH-NGTCEDFGNSHRCHCICWDDLR 142 (145)
Q Consensus 117 -----~~C~-~~~c~~~~g~~~c~c~~~~~~~ 142 (145)
.+|. ++.|.+..++|+|.|++||++.
T Consensus 84 ~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~ 115 (135)
T 2vj3_A 84 DECASSPCLHNGRCLDKINEFQCECPTGFTGH 115 (135)
T ss_dssp CTTTTCCSTTTCEEEECSSCEEEECCTTEESS
T ss_pred CcccCCCcCCCCEeECCCCCeEEECCCCCcCC
Confidence 2455 5799999999999999999764
No 5
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.58 E-value=1.5e-14 Score=87.70 Aligned_cols=96 Identities=38% Similarity=0.942 Sum_probs=75.7
Q ss_pred CCCCCCCCCCCeeeeCC--CceEEeCCCCcccCCccc------------cCCCCcCCCCCCCCEEe-------eCCCCeE
Q psy6349 48 ECESDPCQNGATCQDLI--GGYSCQCARGFQGQNCEL------------NVDDCKPNPCQNGGICH-------DLINHFS 106 (145)
Q Consensus 48 ~c~~~~c~~~~~c~~~~--~~~~c~c~~g~~g~~c~~------------~~~~c~~~~~~~~~~c~-------~~~~~~~ 106 (145)
+|...||..++.|+... ++|.|.|.++|.|..|.. .+++|...+|..++.|+ ++.+.|.
T Consensus 2 ~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~ 81 (143)
T 4d90_A 2 ICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYV 81 (143)
T ss_dssp -CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEE
T ss_pred cCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeE
Confidence 56778888889998764 579999999999988864 23566667788889998 4557899
Q ss_pred eeCCCCCccC-----------CCCC-CCeeeeCCCceeEecCCCCCcCC
Q psy6349 107 CSCPSGLKRE-----------ALCH-NGTCEDFGNSHRCHCICWDDLRN 143 (145)
Q Consensus 107 C~c~~g~~~~-----------~~C~-~~~c~~~~g~~~c~c~~~~~~~~ 143 (145)
|.|++||.+. .+|. ++.|.+..++|+|.|++||++..
T Consensus 82 C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~ 130 (143)
T 4d90_A 82 CKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRN 130 (143)
T ss_dssp EECCTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTT
T ss_pred eECcCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCC
Confidence 9999999864 2355 57999999999999999998764
No 6
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.53 E-value=7.2e-15 Score=92.85 Aligned_cols=113 Identities=22% Similarity=0.566 Sum_probs=92.0
Q ss_pred eeeecCCCCCC--CCCCCC-CEeeeCC-----CceeeecCCCcccCCCCccCCCCCCCCCCCCCeee----eCCCceEEe
Q psy6349 3 NLIVSSPGLKR--EALCHN-GTCEDFG-----NSHRCHCMEGYTGSYCSIEINECESDPCQNGATCQ----DLIGGYSCQ 70 (145)
Q Consensus 3 ~~~~~~~~~~~--~~~c~~-~~c~~~~-----~~~~C~c~~g~~~~~c~~~~~~c~~~~c~~~~~c~----~~~~~~~c~ 70 (145)
.|..+++|... ..+|.+ +.|++.. ++|.|.|.+||.+..+...+++|...+|..++.|+ +..++|.|.
T Consensus 40 ~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~ 119 (186)
T 1z1y_A 40 TCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCS 119 (186)
T ss_dssp EEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGGTTCCCCTTEEEEEEEETTEEEEEEE
T ss_pred ccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcCcCCCCCCCCEEeeCCcCCCCCceEE
Confidence 56677787654 677864 7999998 89999999999987543346889888998888998 677789999
Q ss_pred CCCCccc-----CCcccc-CCCCcCCCC-CCCCEEeeCCCCeEeeCCCCCccC
Q psy6349 71 CARGFQG-----QNCELN-VDDCKPNPC-QNGGICHDLINHFSCSCPSGLKRE 116 (145)
Q Consensus 71 c~~g~~g-----~~c~~~-~~~c~~~~~-~~~~~c~~~~~~~~C~c~~g~~~~ 116 (145)
|..||.+ ..|... +++|. .+| ...+.|+++.++|.|.|++||.+.
T Consensus 120 C~~Gy~g~~~~~~~C~~~~~~~C~-~~C~~~~~~C~n~~g~y~C~C~~G~~g~ 171 (186)
T 1z1y_A 120 CAIGXVPNPEDEXXCTXTGETACQ-LXCNTDNEVCXNVEGVYXCQCMEGFTFD 171 (186)
T ss_dssp ECTEEEEETTTTTEEEEEECCCCC-CCCCTTTEEEEEETTEEEEEECTTCEEE
T ss_pred CCCCCcccCCCCCcceEcCCCccc-ccccccCcceecCCCCeeeECCCCCccC
Confidence 9999987 667632 46776 378 778899999999999999999985
No 7
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.50 E-value=5.9e-14 Score=85.09 Aligned_cols=97 Identities=29% Similarity=0.894 Sum_probs=74.7
Q ss_pred CCCC-CCEeeeCCCceeeecCCCccc---------CCCCccCCCCCCC---CCCCCCeeeeCCCceEEeCCCCcccC---
Q psy6349 15 ALCH-NGTCEDFGNSHRCHCMEGYTG---------SYCSIEINECESD---PCQNGATCQDLIGGYSCQCARGFQGQ--- 78 (145)
Q Consensus 15 ~~c~-~~~c~~~~~~~~C~c~~g~~~---------~~c~~~~~~c~~~---~c~~~~~c~~~~~~~~c~c~~g~~g~--- 78 (145)
++|. ++.|++. |.|.|.+||.+ ..|+ ++++|... +|..++.|++..++|.|.|.++|.+.
T Consensus 7 ~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~-dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~ 82 (143)
T 2bou_A 7 RWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCD-DINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGA 82 (143)
T ss_dssp TTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCE-ECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCC
T ss_pred CcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCC-ccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCc
Confidence 5686 4789864 78999999997 4674 78888764 78888899999999999999999865
Q ss_pred ---------CccccCCCCc--CCCCCCCCEEeeCCCCeEeeCCCCCccC
Q psy6349 79 ---------NCELNVDDCK--PNPCQNGGICHDLINHFSCSCPSGLKRE 116 (145)
Q Consensus 79 ---------~c~~~~~~c~--~~~~~~~~~c~~~~~~~~C~c~~g~~~~ 116 (145)
.|. ++++|. ...|..++.|+++.++|.|.|++||.+.
T Consensus 83 ~~~~~~~~~~C~-dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~ 130 (143)
T 2bou_A 83 KTFKNESENTCQ-DVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPR 130 (143)
T ss_dssp SCBSSGGGCCEE-ECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBC
T ss_pred cccccCCCCCcC-CccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccC
Confidence 343 556665 2557667778877778888888888765
No 8
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.49 E-value=2.4e-13 Score=99.04 Aligned_cols=107 Identities=24% Similarity=0.673 Sum_probs=87.6
Q ss_pred cCCCCCCCCCCCC-CEeeeCCC-ceee-ecCCCccc--CCCCccCCCCCCCC--CCCCC---eeeeCCCceEEe-CCCCc
Q psy6349 7 SSPGLKREALCHN-GTCEDFGN-SHRC-HCMEGYTG--SYCSIEINECESDP--CQNGA---TCQDLIGGYSCQ-CARGF 75 (145)
Q Consensus 7 ~~~~~~~~~~c~~-~~c~~~~~-~~~C-~c~~g~~~--~~c~~~~~~c~~~~--c~~~~---~c~~~~~~~~c~-c~~g~ 75 (145)
+++| ..++|.+ +.|++..+ +|.| .|.+||.| ..|+ .+++|...+ |..++ .|++..++|.|. |.+||
T Consensus 3 IDeC--~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~Ce-DiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy 79 (634)
T 1yo8_A 3 PDGC--LSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRY 79 (634)
T ss_dssp -CGG--GGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCC-BCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTE
T ss_pred cccc--CCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCcc-ccccccCCCCcccCCccccceeeccCceecccCCCCc
Confidence 3445 3578974 79998874 5999 99999996 7886 889998877 88877 899999999998 99999
Q ss_pred ccCCcc--------------ccCCCCcC--CCCCCCCEEeeCC----CCeEeeCCCCCccC
Q psy6349 76 QGQNCE--------------LNVDDCKP--NPCQNGGICHDLI----NHFSCSCPSGLKRE 116 (145)
Q Consensus 76 ~g~~c~--------------~~~~~c~~--~~~~~~~~c~~~~----~~~~C~c~~g~~~~ 116 (145)
.|..+. ..+.+|.. ..|..++.|+++. ++|.|.|++||.+.
T Consensus 80 ~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~Gd 140 (634)
T 1yo8_A 80 RGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGD 140 (634)
T ss_dssp EECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEES
T ss_pred ccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCcccc
Confidence 876542 35778864 4788889999988 89999999999873
No 9
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.41 E-value=3.3e-14 Score=87.92 Aligned_cols=123 Identities=27% Similarity=0.600 Sum_probs=82.9
Q ss_pred ecCCCCCCCCCCCCCEeeeCCCceeeecCCCcc----cCCCCccCCC--CCCC--CC--CCCCeeeeCCC----ceEEeC
Q psy6349 6 VSSPGLKREALCHNGTCEDFGNSHRCHCMEGYT----GSYCSIEINE--CESD--PC--QNGATCQDLIG----GYSCQC 71 (145)
Q Consensus 6 ~~~~~~~~~~~c~~~~c~~~~~~~~C~c~~g~~----~~~c~~~~~~--c~~~--~c--~~~~~c~~~~~----~~~c~c 71 (145)
++++|+. ..+|.++.|++..++|+|.|.+||. +..|+ ++++ |... ++ ...+.|.+..+ .|.|.|
T Consensus 2 dideC~~-~~~C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C 79 (162)
T 1uzk_A 2 DVNECLD-PTTCISGNCVNTPGSYICDCPPDFELNPTRVGCV-DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCC 79 (162)
T ss_dssp CCCGGGS-TTSSBTSEEEEETTEEEEECCTTCEECTTSSBEE-CCCCEEEEEEC----------CEEEEEEEECHHHHHT
T ss_pred ccccCCC-CCCCCCCEeECCCCCEEEeCCCCCeECCCCCccc-CCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeC
Confidence 3556653 4678778999999999999999998 77885 5554 6542 23 23556776655 688999
Q ss_pred CCCcc-cCCccccCCCCcCCCCCCCCEEeeCCCCeEeeCCC--CCccC----------------CCCCCCeeeeCCCcee
Q psy6349 72 ARGFQ-GQNCELNVDDCKPNPCQNGGICHDLINHFSCSCPS--GLKRE----------------ALCHNGTCEDFGNSHR 132 (145)
Q Consensus 72 ~~g~~-g~~c~~~~~~c~~~~~~~~~~c~~~~~~~~C~c~~--g~~~~----------------~~C~~~~c~~~~g~~~ 132 (145)
..+|. +..|. .| .. +..++|.|.|++ ||.+. ..|.++.|.++.|+|+
T Consensus 80 ~~G~~~~~~C~----~C-----~~-----~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~ 145 (162)
T 1uzk_A 80 SLGKAWGTPCE----MC-----PA-----VNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQ 145 (162)
T ss_dssp TTCCEETTTTE----EC-----CC-----TTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEE
T ss_pred CCCCCcCCCcc----cC-----CC-----CCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEE
Confidence 99986 55443 11 11 123456777776 66542 2365579999999999
Q ss_pred EecCCCCCcCCC
Q psy6349 133 CHCICWDDLRNS 144 (145)
Q Consensus 133 c~c~~~~~~~~~ 144 (145)
|.|++||++..+
T Consensus 146 C~C~~Gy~g~~d 157 (162)
T 1uzk_A 146 CRCPTGYYLNED 157 (162)
T ss_dssp EECCTTCCBCTT
T ss_pred eeCCCCccCCCC
Confidence 999999998754
No 10
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.40 E-value=1.8e-12 Score=94.57 Aligned_cols=97 Identities=31% Similarity=0.771 Sum_probs=80.3
Q ss_pred cCCCCCCCCCCCCCeeeeCCC-ceEE-eCCCCccc--CCccccCCCCcCCC--CCCCC---EEeeCCCCeEee-CCCCCc
Q psy6349 45 EINECESDPCQNGATCQDLIG-GYSC-QCARGFQG--QNCELNVDDCKPNP--CQNGG---ICHDLINHFSCS-CPSGLK 114 (145)
Q Consensus 45 ~~~~c~~~~c~~~~~c~~~~~-~~~c-~c~~g~~g--~~c~~~~~~c~~~~--~~~~~---~c~~~~~~~~C~-c~~g~~ 114 (145)
++++|...||..++.|++..+ +|.| .|.+||.| ..|. .+++|...+ |..++ .|+++.++|+|. |++||.
T Consensus 2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~Ce-DiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~ 80 (634)
T 1yo8_A 2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYR 80 (634)
T ss_dssp --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCC-BCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEE
T ss_pred cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCcc-ccccccCCCCcccCCccccceeeccCceecccCCCCcc
Confidence 467888889999999998875 4999 99999986 7786 788997655 88877 899999999998 999997
Q ss_pred cC---------------------------CCCC-CCeeeeCC----CceeEecCCCCCcC
Q psy6349 115 RE---------------------------ALCH-NGTCEDFG----NSHRCHCICWDDLR 142 (145)
Q Consensus 115 ~~---------------------------~~C~-~~~c~~~~----g~~~c~c~~~~~~~ 142 (145)
+. ..|. ++.|.+.. ++|+|.|++||.+.
T Consensus 81 G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~Gd 140 (634)
T 1yo8_A 81 GNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGD 140 (634)
T ss_dssp ECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEES
T ss_pred cCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCcccc
Confidence 43 1455 57899988 99999999999874
No 11
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.39 E-value=2.1e-12 Score=78.18 Aligned_cols=89 Identities=21% Similarity=0.617 Sum_probs=72.0
Q ss_pred CCCCCCCeeeeCCCceEEeCCCCccc---------CCccccCCCCcCC---CCCCCCEEeeCCCCeEeeCCCCCccC---
Q psy6349 52 DPCQNGATCQDLIGGYSCQCARGFQG---------QNCELNVDDCKPN---PCQNGGICHDLINHFSCSCPSGLKRE--- 116 (145)
Q Consensus 52 ~~c~~~~~c~~~~~~~~c~c~~g~~g---------~~c~~~~~~c~~~---~~~~~~~c~~~~~~~~C~c~~g~~~~--- 116 (145)
.+|..++.|++. |.|.|.+||.| ..|. ++++|... +|..++.|+++.++|.|.|++||.+.
T Consensus 7 ~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~-dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~ 82 (143)
T 2bou_A 7 RWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCD-DINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGA 82 (143)
T ss_dssp TTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCE-ECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCC
T ss_pred CcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCC-ccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCc
Confidence 457777788753 78999999986 4564 67888754 68888999999999999999999752
Q ss_pred ---------------------CCCC-CCeeeeCCCceeEecCCCCCcCCC
Q psy6349 117 ---------------------ALCH-NGTCEDFGNSHRCHCICWDDLRNS 144 (145)
Q Consensus 117 ---------------------~~C~-~~~c~~~~g~~~c~c~~~~~~~~~ 144 (145)
..|. ++.|.++.|+|+|.|++||.+..+
T Consensus 83 ~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~ 132 (143)
T 2bou_A 83 KTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHG 132 (143)
T ss_dssp SCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTT
T ss_pred cccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCC
Confidence 3465 579999999999999999998754
No 12
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.32 E-value=2.1e-12 Score=75.65 Aligned_cols=99 Identities=30% Similarity=0.744 Sum_probs=67.7
Q ss_pred ecCCCCCCCCCCCCCEeeeC-CCceeeecCCCcccCCCCccCCCC----CCCCCCCCCeeeeCCCceEEeCCCCcc---c
Q psy6349 6 VSSPGLKREALCHNGTCEDF-GNSHRCHCMEGYTGSYCSIEINEC----ESDPCQNGATCQDLIGGYSCQCARGFQ---G 77 (145)
Q Consensus 6 ~~~~~~~~~~~c~~~~c~~~-~~~~~C~c~~g~~~~~c~~~~~~c----~~~~c~~~~~c~~~~~~~~c~c~~g~~---g 77 (145)
.+++| ..++|.+ .|++. .++|.|.|.+||.+... ++++| ...+|. +.|.+ .++|.|.|.+||. +
T Consensus 3 dideC--~~~pC~~-~C~~~~~g~y~C~C~~Gy~g~~~--~~~~C~~~C~~~~C~--~~C~~-~~~y~C~C~~Gy~~~~g 74 (118)
T 1dx5_I 3 PVDPC--FRANCEY-QCQPLDQTSYLCVCAEGFAPIPH--EPHRCQMFCNQTACP--ADCDP-NTQASCECPEGYILDDG 74 (118)
T ss_dssp CCCGG--GGCCCSS-EEEECSSSCEEEECCTTEEEETT--EEEEEEECCCSSEEE--CEECT-TSTTCEECCTTEEEETT
T ss_pred ccccC--CCCCCCC-CCCCCCCCCEEeECCCCccccCC--CCCccccccCCCCCC--CcccC-CCCeEeECCCCccCCCC
Confidence 34455 4577865 99998 88999999999987643 22333 333443 56766 4788999999998 6
Q ss_pred CCccccCCCCcC-CCCCCCCEEeeCCCCeEeeCCCCCcc
Q psy6349 78 QNCELNVDDCKP-NPCQNGGICHDLINHFSCSCPSGLKR 115 (145)
Q Consensus 78 ~~c~~~~~~c~~-~~~~~~~~c~~~~~~~~C~c~~g~~~ 115 (145)
..|. ++++|.. .+| .+.|+++.++|.|.|++||.+
T Consensus 75 ~~C~-dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g 110 (118)
T 1dx5_I 75 FICT-DIDECENGGFC--SGVCHNLPGTFECICGPDSAL 110 (118)
T ss_dssp TEEE-ECCHHHHCSSC--SSEEEECSSSEEEEECSSSSC
T ss_pred Cccc-cccccCCCCCC--cCeEEeCCCCEEEECCCCCcc
Confidence 6674 6666654 445 566777777777777777754
No 13
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.23 E-value=1.7e-11 Score=71.80 Aligned_cols=92 Identities=28% Similarity=0.684 Sum_probs=69.9
Q ss_pred cCCCCCCCCCCCCCeeeeC-CCceEEeCCCCcccCCccccCCC----CcCCCCCCCCEEeeCCCCeEeeCCCCCc---cC
Q psy6349 45 EINECESDPCQNGATCQDL-IGGYSCQCARGFQGQNCELNVDD----CKPNPCQNGGICHDLINHFSCSCPSGLK---RE 116 (145)
Q Consensus 45 ~~~~c~~~~c~~~~~c~~~-~~~~~c~c~~g~~g~~c~~~~~~----c~~~~~~~~~~c~~~~~~~~C~c~~g~~---~~ 116 (145)
++++|...||.. .|++. .++|.|.|.+||.+.... +++ |....|. +.|++ .++|.|.|++||. +.
T Consensus 3 dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~--~~~C~~~C~~~~C~--~~C~~-~~~y~C~C~~Gy~~~~g~ 75 (118)
T 1dx5_I 3 PVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPHE--PHRCQMFCNQTACP--ADCDP-NTQASCECPEGYILDDGF 75 (118)
T ss_dssp CCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETTE--EEEEEECCCSSEEE--CEECT-TSTTCEECCTTEEEETTT
T ss_pred ccccCCCCCCCC--CCCCCCCCCEEeECCCCccccCCC--CCccccccCCCCCC--CcccC-CCCeEeECCCCccCCCCC
Confidence 578888888863 89998 899999999999876331 222 3233333 57776 4789999999998 32
Q ss_pred -----------CCCCCCeeeeCCCceeEecCCCCCcCCC
Q psy6349 117 -----------ALCHNGTCEDFGNSHRCHCICWDDLRNS 144 (145)
Q Consensus 117 -----------~~C~~~~c~~~~g~~~c~c~~~~~~~~~ 144 (145)
..| ++.|.++.|+|+|.|++||++..+
T Consensus 76 ~C~dideC~~~~~C-~~~C~n~~g~y~C~C~~G~~g~~~ 113 (118)
T 1dx5_I 76 ICTDIDECENGGFC-SGVCHNLPGTFECICGPDSALAGQ 113 (118)
T ss_dssp EEEECCHHHHCSSC-SSEEEECSSSEEEEECSSSSCEEE
T ss_pred ccccccccCCCCCC-cCeEEeCCCCEEEECCCCCccCCC
Confidence 356 679999999999999999988653
No 14
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.23 E-value=2.5e-11 Score=66.52 Aligned_cols=71 Identities=35% Similarity=0.936 Sum_probs=49.2
Q ss_pred eeecCCCCCCCCCCCCCEeeeCCCceeeecCCCcc--cCCCCccCCCCC-CCCCCCCCeeeeCCCceEEeCCCCccc
Q psy6349 4 LIVSSPGLKREALCHNGTCEDFGNSHRCHCMEGYT--GSYCSIEINECE-SDPCQNGATCQDLIGGYSCQCARGFQG 77 (145)
Q Consensus 4 ~~~~~~~~~~~~~c~~~~c~~~~~~~~C~c~~g~~--~~~c~~~~~~c~-~~~c~~~~~c~~~~~~~~c~c~~g~~g 77 (145)
|.++++|+. ..+|.++.|++..++|.|.|.+||. |..|+ ++++|. ..+|.. +.|.+..++|.|.|..||.+
T Consensus 2 C~dideC~~-~~~C~~g~C~n~~g~y~C~C~~Gy~~~g~~C~-dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g 75 (82)
T 1emn_A 2 AVDMDECKE-PDVCKHGQCINTDGSYRCECPFGYILAGNECV-DTDECSVGNPCGN-GTCKNVIGGFECTCEEGFEP 75 (82)
T ss_dssp CCCCCSSSS-TTSCSSSEECCCSSCCCEECCTTEEEETTEEE-ECCGGGTCCTTSS-SCEEECSSSEEECCSSSSCC
T ss_pred CCccccCCC-CCCcCCCEEEecCCCEEEECCCCeECCCCccC-CcccccCCCCCCC-CEeECCCCCEEeECCCCeEe
Confidence 345666654 4667667788777778888888886 66774 667775 456654 46777777777777777764
No 15
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.20 E-value=2.7e-11 Score=67.69 Aligned_cols=79 Identities=25% Similarity=0.563 Sum_probs=64.1
Q ss_pred ceeeecCCCcccCCCCccCCCCCCCCCCCCCeeeeCCCceEEeCCCCcccCCcc-ccCCCCcCCCCCCCCEEeeCC--CC
Q psy6349 28 SHRCHCMEGYTGSYCSIEINECESDPCQNGATCQDLIGGYSCQCARGFQGQNCE-LNVDDCKPNPCQNGGICHDLI--NH 104 (145)
Q Consensus 28 ~~~C~c~~g~~~~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~-~~~~~c~~~~~~~~~~c~~~~--~~ 104 (145)
+|.|.|.+||.+..+ ++++|...|| ++..+.|.|.|.++|. .|. .++++|...+|.+++.|++.. +.
T Consensus 1 sy~C~C~~g~~g~~c--~~~~c~~~pC------~n~~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~ 70 (91)
T 1tpg_A 1 SYQVICRDEKTQMIY--QQHQSWLRPV------LRSNRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSD 70 (91)
T ss_dssp CCCCCCBCSSSCCBC--CSSCEEEEEC------SSSSCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSC
T ss_pred CeeeECCCCCcCCeE--CCCcccCCcc------ccCCCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCC
Confidence 478999999999888 4677766655 3446789999999997 675 356788888899999999876 88
Q ss_pred eEeeCCCCCccC
Q psy6349 105 FSCSCPSGLKRE 116 (145)
Q Consensus 105 ~~C~c~~g~~~~ 116 (145)
|.|.|++||.+.
T Consensus 71 ~~C~C~~G~~G~ 82 (91)
T 1tpg_A 71 FVCQCPEGFAGK 82 (91)
T ss_dssp EEEECCTTCBSS
T ss_pred eEeECCCCCcCC
Confidence 999999999875
No 16
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.17 E-value=1.3e-14 Score=95.16 Aligned_cols=100 Identities=13% Similarity=0.132 Sum_probs=68.4
Q ss_pred CCC-CCEeeeCCCceeeecCCCcccCCCCccCCC------CC-----------------------CCCCCCCCeeeeCCC
Q psy6349 16 LCH-NGTCEDFGNSHRCHCMEGYTGSYCSIEINE------CE-----------------------SDPCQNGATCQDLIG 65 (145)
Q Consensus 16 ~c~-~~~c~~~~~~~~C~c~~g~~~~~c~~~~~~------c~-----------------------~~~c~~~~~c~~~~~ 65 (145)
+|. ++.|++..++|.|.|+.||+|..|+..+++ +. +.||..++.|+....
T Consensus 39 ~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~~ 118 (267)
T 4fbr_A 39 KSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTT 118 (267)
T ss_dssp ECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEE
T ss_pred CcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEecCCc
Confidence 344 479999888999999999998888765555 33 334555666776667
Q ss_pred ceEEeCCCCcccCCccccCCCC------cCC-----------------------CCCCCCEEeeCCCCeEeeCCCCCcc
Q psy6349 66 GYSCQCARGFQGQNCELNVDDC------KPN-----------------------PCQNGGICHDLINHFSCSCPSGLKR 115 (145)
Q Consensus 66 ~~~c~c~~g~~g~~c~~~~~~c------~~~-----------------------~~~~~~~c~~~~~~~~C~c~~g~~~ 115 (145)
+|.|.|+.+|.|..|...+++| ... ++..++.|++...+|+|.|++||++
T Consensus 119 sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G 197 (267)
T 4fbr_A 119 TYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRG 197 (267)
T ss_dssp EETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEEEETTSCCEEEEE
T ss_pred cEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCCCeEEeCCCCccc
Confidence 8889999999877665433331 111 2445566666566677888888764
No 17
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.16 E-value=4.3e-11 Score=66.21 Aligned_cols=70 Identities=34% Similarity=0.830 Sum_probs=48.6
Q ss_pred ecCCCCCCCCCCCCCEeeeCCCceeeecCCCcc-----cCCCCccCCCCCCCC--CCCCCeeeeCCCceEEeCCCCccc
Q psy6349 6 VSSPGLKREALCHNGTCEDFGNSHRCHCMEGYT-----GSYCSIEINECESDP--CQNGATCQDLIGGYSCQCARGFQG 77 (145)
Q Consensus 6 ~~~~~~~~~~~c~~~~c~~~~~~~~C~c~~g~~-----~~~c~~~~~~c~~~~--c~~~~~c~~~~~~~~c~c~~g~~g 77 (145)
++++|...+++|.++.|++..++|.|.|.+||. +..|+ ++++|...+ |. ++.|++..++|.|.|.+||.+
T Consensus 2 dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~-dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~ 78 (86)
T 1lmj_A 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM-DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQL 78 (86)
T ss_dssp CCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEE-ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCC
T ss_pred ccccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccC-CcccccCCCCcCC-CCEeEcCCCCEEEECcCCccc
Confidence 356666666667667888888888888888886 55564 667776554 33 357777777777777777754
No 18
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.13 E-value=8.6e-11 Score=86.79 Aligned_cols=121 Identities=26% Similarity=0.538 Sum_probs=87.3
Q ss_pred CCCCCCCCCC-CEeeeCCCcee---eecCCCcccCCCCccC--------CCCCCC----CCCCCCeeeeCCCceEEeCC-
Q psy6349 10 GLKREALCHN-GTCEDFGNSHR---CHCMEGYTGSYCSIEI--------NECESD----PCQNGATCQDLIGGYSCQCA- 72 (145)
Q Consensus 10 ~~~~~~~c~~-~~c~~~~~~~~---C~c~~g~~~~~c~~~~--------~~c~~~----~c~~~~~c~~~~~~~~c~c~- 72 (145)
|.+...+|.+ +.|.+..|.+. |.|.+||.|..|+..+ +.|... +|..++.|.. +.|.|.
T Consensus 435 C~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~C~C~~ 510 (690)
T 3fcs_B 435 CACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQCVCHS 510 (690)
T ss_dssp CGGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS----SSEEECC
T ss_pred cCCcCCCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC----CeeEeec
Confidence 3445566754 57776666666 9999999999997544 457542 4777788862 479999
Q ss_pred ---CCcccCCccccCCCCcC---CCCCCCCEEeeCCCCeEeeCCCCCccC----------------CCCC-CCeeeeCCC
Q psy6349 73 ---RGFQGQNCELNVDDCKP---NPCQNGGICHDLINHFSCSCPSGLKRE----------------ALCH-NGTCEDFGN 129 (145)
Q Consensus 73 ---~g~~g~~c~~~~~~c~~---~~~~~~~~c~~~~~~~~C~c~~g~~~~----------------~~C~-~~~c~~~~g 129 (145)
++|.|..|+.+...|.. ..|..++.|.. +.|.|.+||.+. ..|. ++.|.+
T Consensus 511 ~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~--- 583 (690)
T 3fcs_B 511 SDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC--- 583 (690)
T ss_dssp CSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEET---
T ss_pred CCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeC---
Confidence 99999999756667764 35777888965 489999999875 1244 567754
Q ss_pred ceeEec-CCCCCcC
Q psy6349 130 SHRCHC-ICWDDLR 142 (145)
Q Consensus 130 ~~~c~c-~~~~~~~ 142 (145)
.+|.| ++||.+.
T Consensus 584 -g~C~C~~~Gy~G~ 596 (690)
T 3fcs_B 584 -GSCVCIQPGSYGD 596 (690)
T ss_dssp -TEEECCSTTCBST
T ss_pred -CEEECCCCCccCC
Confidence 27999 9999865
No 19
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.06 E-value=3.9e-10 Score=76.77 Aligned_cols=109 Identities=34% Similarity=0.851 Sum_probs=57.8
Q ss_pred CCCC-CCEeeeCCCceeeecCCCcccCCCCccCCCCCCCCCCCCCeeeeCCCceEEeCCCCcccCCccccCCCCcCCCCC
Q psy6349 15 ALCH-NGTCEDFGNSHRCHCMEGYTGSYCSIEINECESDPCQNGATCQDLIGGYSCQCARGFQGQNCELNVDDCKPNPCQ 93 (145)
Q Consensus 15 ~~c~-~~~c~~~~~~~~C~c~~g~~~~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~~~~~~c~~~~~~ 93 (145)
.+|. ++.|.+ .+.|.|.+||.|..|+. +.|. .+|..++.|.. .+.|.|.++|.|..|.. ..|. ..|.
T Consensus 153 ~~C~~~G~C~~---~~~C~C~~G~~G~~C~~--~~C~-~~C~~~G~C~~---~~~C~C~~G~~G~~C~~--~~C~-~~C~ 220 (324)
T 2ygq_A 153 GGCRNGGFCNE---RRICECPDGFHGPHCEK--ALCT-PRCMNGGLCVT---PGFCICPPGFYGVNCDK--ANCS-TTCF 220 (324)
T ss_dssp SCCCSSCEECT---TSCEECCTTEESSSSCE--ESSS-SCCCTTCEECS---SCCEECCTTCBTTTTCB--CCCS-SCCC
T ss_pred CCCCCCCEECC---CCeEECCCCCcCCCCCC--CCCC-CCCCCCCEEcC---CCEEeCCCCccCCCccc--CcCC-CCCC
Confidence 4676 378864 36799999999988853 4564 36777788864 35688888888887753 2343 3455
Q ss_pred CCCEEeeCCCCeEeeCCCCCccC--------CCCC-CCeeeeCCCceeEecCCCCCc
Q psy6349 94 NGGICHDLINHFSCSCPSGLKRE--------ALCH-NGTCEDFGNSHRCHCICWDDL 141 (145)
Q Consensus 94 ~~~~c~~~~~~~~C~c~~g~~~~--------~~C~-~~~c~~~~g~~~c~c~~~~~~ 141 (145)
.++.|+.. +.|.|.+||.+. ..|. ++.|.. .++|.|++||.+
T Consensus 221 ~~G~C~~~---~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~---~~~C~C~~G~~G 271 (324)
T 2ygq_A 221 NGGTCFYP---GKCICPPGLEGEQCEISKCPQPCRNGGKCIG---KSKCKCSKGYQG 271 (324)
T ss_dssp SSCCBSCS---SCBCCCTTCCTTTTC-------------------------------
T ss_pred CCCeeCCC---CeeeCCCCccCCCCCcCcCCCcCCCCCEECC---CCEEECCCCCcC
Confidence 56666442 367777777664 1222 234442 345666666654
No 20
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.02 E-value=2.9e-10 Score=77.43 Aligned_cols=109 Identities=34% Similarity=0.883 Sum_probs=44.3
Q ss_pred CCC-CCEeeeCCCceeeecCCCcccCCCCccCCCCCCCCCCCCCeeeeCCCceEEeCCCCcccCCccccCCCCcCCCCCC
Q psy6349 16 LCH-NGTCEDFGNSHRCHCMEGYTGSYCSIEINECESDPCQNGATCQDLIGGYSCQCARGFQGQNCELNVDDCKPNPCQN 94 (145)
Q Consensus 16 ~c~-~~~c~~~~~~~~C~c~~g~~~~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~~~~~~c~~~~~~~ 94 (145)
.|. ++.|.. .+.|.|.+||.|..|+ ...|. .+|..++.|.. .+.|.|.++|.|..|. +..|. .+|.+
T Consensus 186 ~C~~~G~C~~---~~~C~C~~G~~G~~C~--~~~C~-~~C~~~G~C~~---~~~C~C~~G~~G~~C~--~~~C~-~~C~~ 253 (324)
T 2ygq_A 186 RCMNGGLCVT---PGFCICPPGFYGVNCD--KANCS-TTCFNGGTCFY---PGKCICPPGLEGEQCE--ISKCP-QPCRN 253 (324)
T ss_dssp CCCTTCEECS---SCCEECCTTCBTTTTC--BCCCS-SCCCSSCCBSC---SSCBCCCTTCCTTTTC-------------
T ss_pred CCCCCCEEcC---CCEEeCCCCccCCCcc--cCcCC-CCCCCCCeeCC---CCeeeCCCCccCCCCC--cCcCC-CcCCC
Confidence 565 478865 3579999999999995 34564 56888888864 3579999999999885 34454 45777
Q ss_pred CCEEeeCCCCeEeeCCCCCccC--------CCCC-CCeeeeCCCceeEecCCCCCcC
Q psy6349 95 GGICHDLINHFSCSCPSGLKRE--------ALCH-NGTCEDFGNSHRCHCICWDDLR 142 (145)
Q Consensus 95 ~~~c~~~~~~~~C~c~~g~~~~--------~~C~-~~~c~~~~g~~~c~c~~~~~~~ 142 (145)
++.|+. .+.|.|.+||.+. ..|. ++.|.+ .++|.|++||.+.
T Consensus 254 ~g~C~~---~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~---~~~C~C~~G~~G~ 304 (324)
T 2ygq_A 254 GGKCIG---KSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHE---PNKCQCQEGWHGR 304 (324)
T ss_dssp ---------------------------------------------------------
T ss_pred CCEECC---CCEEECCCCCcCCCCcCCCCCCCCCCCCEECC---CCEeECCCCCcCC
Confidence 788863 4689999999875 2344 567765 4689999999864
No 21
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.02 E-value=1e-09 Score=60.00 Aligned_cols=69 Identities=36% Similarity=1.072 Sum_probs=52.7
Q ss_pred cCCCCCC-CCCCCCCeeeeCCCceEEeCCCCcc--cCCccccCCCCc-CCCCCCCCEEeeCCCCeEeeCCCCCccC
Q psy6349 45 EINECES-DPCQNGATCQDLIGGYSCQCARGFQ--GQNCELNVDDCK-PNPCQNGGICHDLINHFSCSCPSGLKRE 116 (145)
Q Consensus 45 ~~~~c~~-~~c~~~~~c~~~~~~~~c~c~~g~~--g~~c~~~~~~c~-~~~~~~~~~c~~~~~~~~C~c~~g~~~~ 116 (145)
++++|.. .+|.. +.|++..++|.|.|.+||. |..|. ++++|. ..+|.+ +.|+++.++|.|.|++||.+.
T Consensus 4 dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~-dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~ 76 (82)
T 1emn_A 4 DMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNECV-DTDECSVGNPCGN-GTCKNVIGGFECTCEEGFEPG 76 (82)
T ss_dssp CCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEEE-ECCGGGTCCTTSS-SCEEECSSSEEECCSSSSCCC
T ss_pred ccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCccC-CcccccCCCCCCC-CEeECCCCCEEeECCCCeEeC
Confidence 6778875 67864 7899999999999999997 77784 677775 455654 477777777888888887764
No 22
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.01 E-value=6.6e-10 Score=67.33 Aligned_cols=69 Identities=35% Similarity=0.848 Sum_probs=40.3
Q ss_pred cCCCCCCCCCCCCCeeeeCCCceEEeCCCCcccCCccccCCCCcCCCCCCCCEE-eeCCCCeEeeCCCCCc
Q psy6349 45 EINECESDPCQNGATCQDLIGGYSCQCARGFQGQNCELNVDDCKPNPCQNGGIC-HDLINHFSCSCPSGLK 114 (145)
Q Consensus 45 ~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~~~~~~c~~~~~~~~~~c-~~~~~~~~C~c~~g~~ 114 (145)
++++|...||..++.|++..++|.|.|.+||.|..|. ++++|..........| ++..++|.|.|++||.
T Consensus 47 dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~-~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~ 116 (146)
T 1x7a_L 47 DGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCE-LDATCNIKNGRCKQFCKTGADSKVLCSCTTGYR 116 (146)
T ss_dssp ---CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTC-EECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEE
T ss_pred CcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCC-CCccccCCCCCCcCCCCCCCCCCEEeEcCCCcE
Confidence 5566666666666667666666677777777666665 3455654322222356 6666666677777666
No 23
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.01 E-value=2.4e-10 Score=63.27 Aligned_cols=70 Identities=29% Similarity=0.808 Sum_probs=52.3
Q ss_pred cCCCCCCCCCCCCCEeeeCCCceeeecCCCcc----cCCCCccCCCCCCCCCCCCCeeeeCCCceEEeCCCCcccCCc
Q psy6349 7 SSPGLKREALCHNGTCEDFGNSHRCHCMEGYT----GSYCSIEINECESDPCQNGATCQDLIGGYSCQCARGFQGQNC 80 (145)
Q Consensus 7 ~~~~~~~~~~c~~~~c~~~~~~~~C~c~~g~~----~~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c 80 (145)
+++|...+.+|.++.|++..+.|.|.|.+||. +..|+ ++++|...+|. +.|++..++|.|.|. ++.|..+
T Consensus 3 ideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~-dideC~~~~C~--~~C~n~~g~y~C~C~-g~~G~~~ 76 (87)
T 1z6c_A 3 VDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSENMCA--QLCVNYPGGYTCYCD-GKKGFKL 76 (87)
T ss_dssp SCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEE-CCCHHHHSCCS--SEECCCSSSCCEECC-SSSCCBC
T ss_pred cccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCC-CcCeeCCCCCC--CEEEccCCCEEEECC-CCcCCcc
Confidence 55666665567557888888889999999998 67774 77888777775 588888888999986 4444444
No 24
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.00 E-value=6e-10 Score=69.19 Aligned_cols=106 Identities=29% Similarity=0.776 Sum_probs=74.3
Q ss_pred CEeeeCCCceeeecCCCcccCCCCccCCCCCCCCCC-CCCeeeeCCCceEEeCCCCcccCCccccCCCCcCCC-CCCCCE
Q psy6349 20 GTCEDFGNSHRCHCMEGYTGSYCSIEINECESDPCQ-NGATCQDLIGGYSCQCARGFQGQNCELNVDDCKPNP-CQNGGI 97 (145)
Q Consensus 20 ~~c~~~~~~~~C~c~~g~~~~~c~~~~~~c~~~~c~-~~~~c~~~~~~~~c~c~~g~~g~~c~~~~~~c~~~~-~~~~~~ 97 (145)
+.|.. ...|.|.+||.|..|+ ...|.. .|. .++.|.. .+.|.|.++|.|..|.. |...+ |.+ +.
T Consensus 44 g~C~~---~g~C~C~~G~~G~~C~--~~~C~~-~C~~~~g~C~~---~~~C~C~~G~~G~~C~~----C~~~~~C~~-g~ 109 (169)
T 2vj2_A 44 YACDQ---NGNKTCMEGWMGPECN--RAICRQ-GCSPKHGSCKL---PGDCRCQYGWQGLYCDK----CIPHPGCVH-GI 109 (169)
T ss_dssp EEECS---SCCEEECTTEESTTSC--EECCCT-TCCTTTEECSS---TTCCEECTTEESSSSCE----ECCCTTCSS-EE
T ss_pred CEeCC---CCeeECCCCCcCCCCC--CCCCCC-CCCCCCcccCC---CCeeECCCCCCCCCccc----CCCCCCCCC-CC
Confidence 45642 2367999999999985 344543 343 3455653 46799999999988852 33333 443 36
Q ss_pred EeeCCCCeEeeCCCCCccC------------CCCC-CCeeeeC-CCceeEecCCCCCcC
Q psy6349 98 CHDLINHFSCSCPSGLKRE------------ALCH-NGTCEDF-GNSHRCHCICWDDLR 142 (145)
Q Consensus 98 c~~~~~~~~C~c~~g~~~~------------~~C~-~~~c~~~-~g~~~c~c~~~~~~~ 142 (145)
|+ +.+.|.|++||.+. .+|. ++.|.+. .++|+|.|++||++.
T Consensus 110 C~---~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~ 165 (169)
T 2vj2_A 110 CN---EPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGP 165 (169)
T ss_dssp CS---STTCCEECTTEETTTTCEESCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCST
T ss_pred cC---CCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCc
Confidence 65 46789999999764 3465 5799986 789999999999875
No 25
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.00 E-value=3.6e-11 Score=73.08 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=27.3
Q ss_pred ecCCCCCCCCCCCCCEeeeCCCceeeecCCCcccCC
Q psy6349 6 VSSPGLKREALCHNGTCEDFGNSHRCHCMEGYTGSY 41 (145)
Q Consensus 6 ~~~~~~~~~~~c~~~~c~~~~~~~~C~c~~g~~~~~ 41 (145)
++++|+ ..+|.++.|++..++|.|.|.+||.+..
T Consensus 3 dideC~--~~pC~ng~C~n~~g~y~C~C~~G~~g~~ 36 (147)
T 2w86_A 3 DIDECE--SSPCINGVCKNSPGSFICECSSESTLDP 36 (147)
T ss_dssp CCCGGG--GCCSBTSEEEEETTEEEEECCTTEEECT
T ss_pred cCccCc--CCCCCCCEeECCCCCEEeECCCCcccCC
Confidence 345554 4679878999999999999999998654
No 26
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.99 E-value=1.3e-10 Score=70.65 Aligned_cols=100 Identities=26% Similarity=0.640 Sum_probs=64.5
Q ss_pred ccCCCCCCCCCCCCCeeeeCCCceEEeCCCCcccCC----ccccCC-CCcC----CCC-------CCCCEEeeCCCC---
Q psy6349 44 IEINECESDPCQNGATCQDLIGGYSCQCARGFQGQN----CELNVD-DCKP----NPC-------QNGGICHDLINH--- 104 (145)
Q Consensus 44 ~~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~~----c~~~~~-~c~~----~~~-------~~~~~c~~~~~~--- 104 (145)
.++++|...||.+ +.|++..++|.|.|.++|.+.. |..... .|.. ..| .....|.+..+.
T Consensus 2 ~dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g 80 (147)
T 2w86_A 2 ADIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWG 80 (147)
T ss_dssp CCCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEET
T ss_pred CcCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccC
Confidence 3678898889975 6999999999999999998542 221000 0000 000 000011111121
Q ss_pred -------eEeeCCCCCc---cC------------CCCCCCeeeeCCCceeEecCCCCCcCCC
Q psy6349 105 -------FSCSCPSGLK---RE------------ALCHNGTCEDFGNSHRCHCICWDDLRNS 144 (145)
Q Consensus 105 -------~~C~c~~g~~---~~------------~~C~~~~c~~~~g~~~c~c~~~~~~~~~ 144 (145)
|.|.|++||. +. ..|.++.|.++.|+|+|.|++||++..+
T Consensus 81 ~~C~~c~~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~ 142 (147)
T 2w86_A 81 SPCTLCQVDPICGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDAT 142 (147)
T ss_dssp TTTEECCCCTTTCTTEEEEETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTT
T ss_pred CCcccCCCcccCCCccccCCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCC
Confidence 5678999995 21 2376679999999999999999998754
No 27
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.96 E-value=1.9e-09 Score=62.65 Aligned_cols=73 Identities=30% Similarity=0.639 Sum_probs=48.7
Q ss_pred eecCCCCCCC------CCCC-CCEeeeCCCceeeecCCCcccCCCCccC--CCCCCCCCCCCCeeeeCCCceEEeCCCCc
Q psy6349 5 IVSSPGLKRE------ALCH-NGTCEDFGNSHRCHCMEGYTGSYCSIEI--NECESDPCQNGATCQDLIGGYSCQCARGF 75 (145)
Q Consensus 5 ~~~~~~~~~~------~~c~-~~~c~~~~~~~~C~c~~g~~~~~c~~~~--~~c~~~~c~~~~~c~~~~~~~~c~c~~g~ 75 (145)
.++++|+..+ +.|. ++.|++..++|.|.|.+||.|..|+..+ ++|...+......|++..++|.|.|..||
T Consensus 4 ~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~ 83 (114)
T 1aut_L 4 VDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGY 83 (114)
T ss_dssp ----CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTE
T ss_pred eecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCe
Confidence 3455555443 3365 4789988888999999999998886322 35654322223378888889999999998
Q ss_pred cc
Q psy6349 76 QG 77 (145)
Q Consensus 76 ~g 77 (145)
.+
T Consensus 84 ~~ 85 (114)
T 1aut_L 84 KL 85 (114)
T ss_dssp EE
T ss_pred eE
Confidence 73
No 28
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.96 E-value=1e-09 Score=60.56 Aligned_cols=69 Identities=35% Similarity=1.118 Sum_probs=47.2
Q ss_pred cCCCCCCCC--CCCCCeeeeCCCceEEeCCCCcc-----cCCccccCCCCcCCC--CCCCCEEeeCCCCeEeeCCCCCcc
Q psy6349 45 EINECESDP--CQNGATCQDLIGGYSCQCARGFQ-----GQNCELNVDDCKPNP--CQNGGICHDLINHFSCSCPSGLKR 115 (145)
Q Consensus 45 ~~~~c~~~~--c~~~~~c~~~~~~~~c~c~~g~~-----g~~c~~~~~~c~~~~--~~~~~~c~~~~~~~~C~c~~g~~~ 115 (145)
++++|...+ |.. +.|++..++|.|.|.+||. +..|. ++++|...+ |. ++.|+++.++|.|.|++||.+
T Consensus 2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~-dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~ 78 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCM-DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQL 78 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEE-ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCC
T ss_pred ccccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccC-CcccccCCCCcCC-CCEeEcCCCCEEEECcCCccc
Confidence 467777655 754 4899999999999999997 55664 666665433 33 356766666777777777665
Q ss_pred C
Q psy6349 116 E 116 (145)
Q Consensus 116 ~ 116 (145)
.
T Consensus 79 ~ 79 (86)
T 1lmj_A 79 S 79 (86)
T ss_dssp C
T ss_pred C
Confidence 3
No 29
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.92 E-value=7.6e-10 Score=68.70 Aligned_cols=88 Identities=34% Similarity=1.018 Sum_probs=68.6
Q ss_pred CCCEeeeCCCceeeecCCCcccCCCCccCCCCCCCC-CCCCCeeeeCCCceEEeCCCCcccCCccccCCCCcC-CCCCCC
Q psy6349 18 HNGTCEDFGNSHRCHCMEGYTGSYCSIEINECESDP-CQNGATCQDLIGGYSCQCARGFQGQNCELNVDDCKP-NPCQNG 95 (145)
Q Consensus 18 ~~~~c~~~~~~~~C~c~~g~~~~~c~~~~~~c~~~~-c~~~~~c~~~~~~~~c~c~~g~~g~~c~~~~~~c~~-~~~~~~ 95 (145)
.++.|.+ .+.|.|.+||.|..|+ +|...+ |..+ .|+ +.+.|.|.++|.|..|..++++|.. .+|..+
T Consensus 75 ~~g~C~~---~~~C~C~~G~~G~~C~----~C~~~~~C~~g-~C~---~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~ 143 (169)
T 2vj2_A 75 KHGSCKL---PGDCRCQYGWQGLYCD----KCIPHPGCVHG-ICN---EPWQCLCETNWGGQLCDKDLNYCGTHQPCLNG 143 (169)
T ss_dssp TTEECSS---TTCCEECTTEESSSSC----EECCCTTCSSE-ECS---STTCCEECTTEETTTTCEESCHHHHTCCCCTT
T ss_pred CCcccCC---CCeeECCCCCCCCCcc----cCCCCCCCCCC-CcC---CCCEEeCCCCCCCCcccCCCCCCCCCCCCCCC
Confidence 3566764 4689999999999884 244444 5533 675 4678999999999999766777764 678889
Q ss_pred CEEeeC-CCCeEeeCCCCCccC
Q psy6349 96 GICHDL-INHFSCSCPSGLKRE 116 (145)
Q Consensus 96 ~~c~~~-~~~~~C~c~~g~~~~ 116 (145)
+.|+++ .++|.|.|++||.+.
T Consensus 144 g~C~~~~~~~~~C~C~~G~~G~ 165 (169)
T 2vj2_A 144 GTCSNTGPDKYQCSCPEGYSGP 165 (169)
T ss_dssp CEEEECSTTCEEEECCTTCCST
T ss_pred CEEcCCCCCCcEeECCCCCcCc
Confidence 999986 788999999999885
No 30
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.91 E-value=2.4e-09 Score=62.23 Aligned_cols=72 Identities=31% Similarity=0.696 Sum_probs=54.0
Q ss_pred cCCCCCCCC--------CCCCCeeeeCCCceEEeCCCCcccCCccccC--CCCcCCCCCCCCEEeeCCCCeEeeCCCCCc
Q psy6349 45 EINECESDP--------CQNGATCQDLIGGYSCQCARGFQGQNCELNV--DDCKPNPCQNGGICHDLINHFSCSCPSGLK 114 (145)
Q Consensus 45 ~~~~c~~~~--------c~~~~~c~~~~~~~~c~c~~g~~g~~c~~~~--~~c~~~~~~~~~~c~~~~~~~~C~c~~g~~ 114 (145)
++++|...| |..++.|++..++|.|.|..||.|..|...+ ++|..........|+++.++|.|.|++||.
T Consensus 5 d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~ 84 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYK 84 (114)
T ss_dssp ---CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEE
T ss_pred ecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCee
Confidence 456666666 7788899988899999999999999887433 356543323334899999999999999998
Q ss_pred cC
Q psy6349 115 RE 116 (145)
Q Consensus 115 ~~ 116 (145)
+.
T Consensus 85 ~~ 86 (114)
T 1aut_L 85 LG 86 (114)
T ss_dssp EC
T ss_pred EC
Confidence 64
No 31
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.90 E-value=3.5e-09 Score=59.04 Aligned_cols=63 Identities=30% Similarity=0.830 Sum_probs=52.7
Q ss_pred EeeeCCCceeeecCCCcccCCCC-ccCCCCCCCCCCCCCeeeeCC--CceEEeCCCCcccCCccccCC
Q psy6349 21 TCEDFGNSHRCHCMEGYTGSYCS-IEINECESDPCQNGATCQDLI--GGYSCQCARGFQGQNCELNVD 85 (145)
Q Consensus 21 ~c~~~~~~~~C~c~~g~~~~~c~-~~~~~c~~~~c~~~~~c~~~~--~~~~c~c~~g~~g~~c~~~~~ 85 (145)
.|++..+.|.|.|.+||. .|+ .++++|.+.||.+++.|++.. +.|.|.|..+|.|..|..+++
T Consensus 24 pC~n~~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~id 89 (91)
T 1tpg_A 24 PVLRSNRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTR 89 (91)
T ss_dssp ECSSSSCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCBCSS
T ss_pred ccccCCCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCCCCcCCcCCcCCC
Confidence 455667789999999997 775 367889999999999999876 899999999999999975443
No 32
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.90 E-value=2.6e-09 Score=64.43 Aligned_cols=74 Identities=28% Similarity=0.662 Sum_probs=44.5
Q ss_pred ecCCCCCCCCCCCC-CEeeeCCCceeeecCCCcccCCCCccCCCCCCCCCCCCC---eeeeCCC-ceEEeCCCCcc----
Q psy6349 6 VSSPGLKREALCHN-GTCEDFGNSHRCHCMEGYTGSYCSIEINECESDPCQNGA---TCQDLIG-GYSCQCARGFQ---- 76 (145)
Q Consensus 6 ~~~~~~~~~~~c~~-~~c~~~~~~~~C~c~~g~~~~~c~~~~~~c~~~~c~~~~---~c~~~~~-~~~c~c~~g~~---- 76 (145)
.++.|. .++|.+ +.|++..++|.|.|.+||.|..|+..++.+...++..+. .|++..+ +|.|.|..||.
T Consensus 46 did~C~--~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~d 123 (142)
T 2c4f_L 46 DGDQCA--SSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLAD 123 (142)
T ss_dssp TCCGGG--GCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTT
T ss_pred ccCcCc--CCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCC
Confidence 344443 456764 677777777777777777777775333443222222222 6776666 77777777776
Q ss_pred cCCcc
Q psy6349 77 GQNCE 81 (145)
Q Consensus 77 g~~c~ 81 (145)
|..|.
T Consensus 124 G~~C~ 128 (142)
T 2c4f_L 124 GVSCT 128 (142)
T ss_dssp SSCEE
T ss_pred CCCCC
Confidence 55554
No 33
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.89 E-value=1.8e-09 Score=65.42 Aligned_cols=71 Identities=24% Similarity=0.492 Sum_probs=39.9
Q ss_pred eeecCCCCCCCCCCCC-CEeeeCCCceeeecCCCcccCCCCccCCCCCCCCCCCCCee-eeCCCceEEeCCCCccc
Q psy6349 4 LIVSSPGLKREALCHN-GTCEDFGNSHRCHCMEGYTGSYCSIEINECESDPCQNGATC-QDLIGGYSCQCARGFQG 77 (145)
Q Consensus 4 ~~~~~~~~~~~~~c~~-~~c~~~~~~~~C~c~~g~~~~~c~~~~~~c~~~~c~~~~~c-~~~~~~~~c~c~~g~~g 77 (145)
|..++.|. .++|.+ +.|++..++|.|.|.+||.|..|+ ++++|...+......| .+..++|.|.|..||.+
T Consensus 45 c~dideC~--~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~-~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l 117 (146)
T 1x7a_L 45 YVDGDQCE--PNPCLNGGLCKDDINSYECWCQVGFEGKNCE-LDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRL 117 (146)
T ss_dssp -----CCS--SCSSCTTCEEEECSSCEEEECCSSEESTTTC-EECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEE
T ss_pred CCCcCcCC--CCCCCCCCEeECCCCCEEEecCCCCcCCcCC-CCccccCCCCCCcCCCCCCCCCCEEeEcCCCcEe
Confidence 44455553 456654 577776666777777777777774 4466654322222366 66666777777777653
No 34
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.89 E-value=4.2e-10 Score=71.09 Aligned_cols=77 Identities=27% Similarity=0.649 Sum_probs=22.8
Q ss_pred eeeecCCCCCCCCCCCC-CEeeeCCCceeeecCCCcccCCCCccC-CCCCCCCCCCCCeeeeCCCceEEeCCCCcc----
Q psy6349 3 NLIVSSPGLKREALCHN-GTCEDFGNSHRCHCMEGYTGSYCSIEI-NECESDPCQNGATCQDLIGGYSCQCARGFQ---- 76 (145)
Q Consensus 3 ~~~~~~~~~~~~~~c~~-~~c~~~~~~~~C~c~~g~~~~~c~~~~-~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~---- 76 (145)
.|..++.|. ..+|.+ +.|++..++|.|.|.+||.|..|+..+ ++|...+......|.+..++|.|.|..||.
T Consensus 38 ~c~dideC~--~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~d 115 (195)
T 1nfu_B 38 KYKDGDQCE--TSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADN 115 (195)
T ss_dssp ---------------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTT
T ss_pred cCCCCcccC--CCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCCEeECCCCCeEEECCCCceeCCC
Confidence 344555554 456764 678877777888888888888886434 567653322223777777888888888887
Q ss_pred cCCcc
Q psy6349 77 GQNCE 81 (145)
Q Consensus 77 g~~c~ 81 (145)
|..|.
T Consensus 116 G~~C~ 120 (195)
T 1nfu_B 116 GKACI 120 (195)
T ss_dssp SSCEE
T ss_pred CCccc
Confidence 66665
No 35
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.84 E-value=5.2e-09 Score=63.13 Aligned_cols=71 Identities=38% Similarity=0.820 Sum_probs=56.3
Q ss_pred cCCCCCCCCCCCCCeeeeCCCceEEeCCCCcccCCccccCCCCcCCCCCCC---CEEeeCCC-CeEeeCCCCCcc
Q psy6349 45 EINECESDPCQNGATCQDLIGGYSCQCARGFQGQNCELNVDDCKPNPCQNG---GICHDLIN-HFSCSCPSGLKR 115 (145)
Q Consensus 45 ~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~~~~~~c~~~~~~~~---~~c~~~~~-~~~C~c~~g~~~ 115 (145)
++++|...||..++.|++..++|.|.|..||.|..|...++++..-.+..+ ..|++..+ +|.|.|++||.+
T Consensus 46 did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l 120 (142)
T 2c4f_L 46 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSL 120 (142)
T ss_dssp TCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEE
T ss_pred ccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceE
Confidence 678898899999999999999999999999999999754444422222222 28988888 999999999985
No 36
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.81 E-value=1e-08 Score=75.90 Aligned_cols=90 Identities=28% Similarity=0.705 Sum_probs=70.4
Q ss_pred CCCC-CCEeeeCCCceeeecC----CCcccCCCCccCCCCCC---CCCCCCCeeeeCCCceEEeCCCCcccCCcc--ccC
Q psy6349 15 ALCH-NGTCEDFGNSHRCHCM----EGYTGSYCSIEINECES---DPCQNGATCQDLIGGYSCQCARGFQGQNCE--LNV 84 (145)
Q Consensus 15 ~~c~-~~~c~~~~~~~~C~c~----~g~~~~~c~~~~~~c~~---~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~--~~~ 84 (145)
.+|. +|.|.. +.|.|. +||.|..|+.+...|.. .+|..++.|.. +.|.|.+||.|..|. ...
T Consensus 493 ~~Cs~~G~C~~----g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~G~~CeC~~~~ 564 (690)
T 3fcs_B 493 PVCSQRGECLC----GQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWTGYYCNCTTRT 564 (690)
T ss_dssp CGGGGSEEECS----SSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTEESSSSCEECCC
T ss_pred CCCCCCCEEEC----CeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCCcCCCCccCCCC
Confidence 3475 478873 479999 99999999766677864 46877888864 689999999999986 345
Q ss_pred CCCcC---CCCCCCCEEeeCCCCeEeeC-CCCCccC
Q psy6349 85 DDCKP---NPCQNGGICHDLINHFSCSC-PSGLKRE 116 (145)
Q Consensus 85 ~~c~~---~~~~~~~~c~~~~~~~~C~c-~~g~~~~ 116 (145)
..|.. ..|..++.|+.. .|.| .+||.+.
T Consensus 565 ~~C~~~~g~~C~~~G~C~~g----~C~C~~~Gy~G~ 596 (690)
T 3fcs_B 565 DTCMSSNGLLCSGRGKCECG----SCVCIQPGSYGD 596 (690)
T ss_dssp TTTBCTTSSBTSSSCEEETT----EEECCSTTCBST
T ss_pred CcccCCCCCCCCCCCEEeCC----EEECCCCCccCC
Confidence 67764 468888999653 8999 9999985
No 37
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.80 E-value=1.8e-09 Score=64.51 Aligned_cols=70 Identities=39% Similarity=0.930 Sum_probs=18.3
Q ss_pred cCCCCCCCCCCCCCeeeeCCCceEEeCCCCcccCCccccC-CCCcCCCCCCCCEEeeCCCCeEeeCCCCCc
Q psy6349 45 EINECESDPCQNGATCQDLIGGYSCQCARGFQGQNCELNV-DDCKPNPCQNGGICHDLINHFSCSCPSGLK 114 (145)
Q Consensus 45 ~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~~~~-~~c~~~~~~~~~~c~~~~~~~~C~c~~g~~ 114 (145)
++++|.+.||..++.|++..++|.|.|..||.|..|...+ ++|..........|++..++|.|.|++||.
T Consensus 41 d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~ 111 (134)
T 2vh0_B 41 DGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYT 111 (134)
T ss_dssp ----------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEE
T ss_pred CcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcE
Confidence 5667777777777777777777777777777777776434 556543222223777777777777777776
No 38
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.79 E-value=1.2e-09 Score=68.95 Aligned_cols=71 Identities=38% Similarity=0.907 Sum_probs=23.4
Q ss_pred cCCCCCCCCCCCCCeeeeCCCceEEeCCCCcccCCccccC-CCCcCCCCCCCCEEeeCCCCeEeeCCCCCcc
Q psy6349 45 EINECESDPCQNGATCQDLIGGYSCQCARGFQGQNCELNV-DDCKPNPCQNGGICHDLINHFSCSCPSGLKR 115 (145)
Q Consensus 45 ~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~~~~-~~c~~~~~~~~~~c~~~~~~~~C~c~~g~~~ 115 (145)
++++|...||..++.|++..++|.|.|.+||.|..|...+ ++|..........|++..++|.|.|++||.+
T Consensus 41 dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l 112 (195)
T 1nfu_B 41 DGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTL 112 (195)
T ss_dssp ----------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEE
T ss_pred CCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCCEeECCCCCeEEECCCCcee
Confidence 7889998999999999999999999999999999997545 6786533333348999999999999999983
No 39
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.79 E-value=9.8e-09 Score=69.74 Aligned_cols=69 Identities=36% Similarity=0.781 Sum_probs=53.4
Q ss_pred ecCCCCCCCCCCCC-CEeeeCCCceeeecCCCcccCCCCccCCCCCC---CCCCCCCeeeeCCCceEEeCCCCcccC
Q psy6349 6 VSSPGLKREALCHN-GTCEDFGNSHRCHCMEGYTGSYCSIEINECES---DPCQNGATCQDLIGGYSCQCARGFQGQ 78 (145)
Q Consensus 6 ~~~~~~~~~~~c~~-~~c~~~~~~~~C~c~~g~~~~~c~~~~~~c~~---~~c~~~~~c~~~~~~~~c~c~~g~~g~ 78 (145)
++++| ...+|.+ +.|.+..+.|.|.|.+||.|..|+.++++|.. .+|.. .|.+..++|.|.|..+|.+.
T Consensus 4 d~~~C--~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 4 GGSPC--ISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG 76 (317)
T ss_dssp --CCT--TSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred cCCcC--CCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEEecccccccc
Confidence 34555 4567875 78988888889999999999999767888876 56765 88888888999999888764
No 40
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.76 E-value=3.5e-09 Score=60.80 Aligned_cols=80 Identities=30% Similarity=0.734 Sum_probs=33.5
Q ss_pred ecCCCcccCCCCccCCCCCCCCCCCCCeeeeCCCceEEeCCCCccc---CCccccCCCCcC-CCCCCCCEEeeCCCCeEe
Q psy6349 32 HCMEGYTGSYCSIEINECESDPCQNGATCQDLIGGYSCQCARGFQG---QNCELNVDDCKP-NPCQNGGICHDLINHFSC 107 (145)
Q Consensus 32 ~c~~g~~~~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g---~~c~~~~~~c~~-~~~~~~~~c~~~~~~~~C 107 (145)
....+|.+..| ++++|...+......|++..++|.|.|.+||.+ ..|. ++++|.. ..|. +.|+++.++|.|
T Consensus 17 ~~~~~~~~~~C--d~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~~g~~C~-dideC~~~~~C~--~~C~n~~gsy~C 91 (107)
T 2w2n_E 17 TTENLYFQGAM--GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYKC 91 (107)
T ss_dssp ---CCCCSCCB--SCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEETTTEEE-C-------------------------
T ss_pred ccCCCcCCCCC--cCccCcCCCCCCCCEeEeCCCCeEEECCCCccccCCCccc-cccccCCCCCcC--CeeecCCCCEEE
Confidence 35566777777 567886532222358988889999999999986 5675 6677752 3343 466666667777
Q ss_pred eCCCCCccC
Q psy6349 108 SCPSGLKRE 116 (145)
Q Consensus 108 ~c~~g~~~~ 116 (145)
.|++||.+.
T Consensus 92 ~C~~Gy~~~ 100 (107)
T 2w2n_E 92 QCEEGFQLD 100 (107)
T ss_dssp ---------
T ss_pred ECCCCceEC
Confidence 777776653
No 41
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.74 E-value=2.4e-09 Score=63.94 Aligned_cols=72 Identities=26% Similarity=0.593 Sum_probs=16.4
Q ss_pred eeecCCCCCCCCCCCC-CEeeeCCCceeeecCCCcccCCCCccC-CCCCCCCCCCCCeeeeCCCceEEeCCCCccc
Q psy6349 4 LIVSSPGLKREALCHN-GTCEDFGNSHRCHCMEGYTGSYCSIEI-NECESDPCQNGATCQDLIGGYSCQCARGFQG 77 (145)
Q Consensus 4 ~~~~~~~~~~~~~c~~-~~c~~~~~~~~C~c~~g~~~~~c~~~~-~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g 77 (145)
+..++.|. ..+|.+ +.|++..+.|.|.|.+||.|..|...+ ++|...+......|++..++|.|.|.+||.+
T Consensus 39 c~d~d~C~--~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l 112 (134)
T 2vh0_B 39 YKDGDQCE--TSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTL 112 (134)
T ss_dssp --------------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEE
T ss_pred CCCcCcCC--CCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEE
Confidence 34444443 345653 566666666666666666666665334 4565432212226666666666666666643
No 42
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.73 E-value=6.8e-12 Score=82.35 Aligned_cols=119 Identities=13% Similarity=0.069 Sum_probs=81.4
Q ss_pred eeeCCCceeeecCCC---cccCCCCccCCCCCCCCCCCCCeeeeCCCceEEeCCCCcccCCccccCCC------------
Q psy6349 22 CEDFGNSHRCHCMEG---YTGSYCSIEINECESDPCQNGATCQDLIGGYSCQCARGFQGQNCELNVDD------------ 86 (145)
Q Consensus 22 c~~~~~~~~C~c~~g---~~~~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~~~~~~------------ 86 (145)
+++.-|.+.+.+.++ +.+.++...+..+. .++..++.|+....+|.|.|+.+|.|..|+..+++
T Consensus 6 ~~n~~Gg~s~~~~pgg~~~~g~~~~~n~~~~~-~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC 84 (267)
T 4fbr_A 6 VQNQWGGSQATWNPGGLWLIGARDKQNVVALD-IKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPW 84 (267)
T ss_dssp EEEECSSTTSCCEEEEEEECCCCSSCCEEEEE-EECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCE
T ss_pred EeecCCcccCCcCCCCceeeccccccccccCC-CCcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcc
Confidence 345555566666666 34555543333332 36778899999889999999999998777654443
Q ss_pred -----------------CcCCCCCCCCEEeeCCCCeEeeCCCCCccC---------------------------------
Q psy6349 87 -----------------CKPNPCQNGGICHDLINHFSCSCPSGLKRE--------------------------------- 116 (145)
Q Consensus 87 -----------------c~~~~~~~~~~c~~~~~~~~C~c~~g~~~~--------------------------------- 116 (145)
|...+|...+.|++...+|.|.|++||+++
T Consensus 85 ~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~ 164 (267)
T 4fbr_A 85 QPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGK 164 (267)
T ss_dssp EEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTT
T ss_pred cCCCeeeccCccccccccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccc
Confidence 223345666777776677888999888754
Q ss_pred -------CCCC-CCeeeeCCCceeEecCCCCCc
Q psy6349 117 -------ALCH-NGTCEDFGNSHRCHCICWDDL 141 (145)
Q Consensus 117 -------~~C~-~~~c~~~~g~~~c~c~~~~~~ 141 (145)
.+|. +++|.+...+|+|.|++||+.
T Consensus 165 ~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G 197 (267)
T 4fbr_A 165 QNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRG 197 (267)
T ss_dssp SCEEEEEEECSSTTSEEEEEEEETTSCCEEEEE
T ss_pred cccccCCCCCCCCCEeeCCCCCeEEeCCCCccc
Confidence 1233 567777778888999988865
No 43
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.72 E-value=1.2e-08 Score=75.51 Aligned_cols=112 Identities=31% Similarity=0.768 Sum_probs=77.6
Q ss_pred CCCC-CCEeeeCCCceeeecCCCcccCCCCccCC---------CCCCC----CCCCCCeeeeCCCceEEeCC------CC
Q psy6349 15 ALCH-NGTCEDFGNSHRCHCMEGYTGSYCSIEIN---------ECESD----PCQNGATCQDLIGGYSCQCA------RG 74 (145)
Q Consensus 15 ~~c~-~~~c~~~~~~~~C~c~~g~~~~~c~~~~~---------~c~~~----~c~~~~~c~~~~~~~~c~c~------~g 74 (145)
..|. +|.|.. ..|.|.+||.|..|+.... .|... +|..++.|.. + .|.|. ++
T Consensus 435 ~~Cs~~G~C~~----g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~--G--~C~C~~~~~~~~G 506 (687)
T 3k6s_B 435 SLCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC--G--QCLCHTSDVPGKL 506 (687)
T ss_dssp STGGGSEEESS----SSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET--T--EEEECCCCSTTCC
T ss_pred CCCCCCCEEeC----CEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC--C--EEEcCCCCCCCCC
Confidence 4564 466652 3699999999999973332 46543 3777788872 2 79999 99
Q ss_pred cccCCccccCCCCcC---CCCCC--CCEEeeCCCCeEeeCCCCCccC----------------CCCC-CCeeeeCCCcee
Q psy6349 75 FQGQNCELNVDDCKP---NPCQN--GGICHDLINHFSCSCPSGLKRE----------------ALCH-NGTCEDFGNSHR 132 (145)
Q Consensus 75 ~~g~~c~~~~~~c~~---~~~~~--~~~c~~~~~~~~C~c~~g~~~~----------------~~C~-~~~c~~~~g~~~ 132 (145)
|.|..|+.+...|.. ..|.. ++.|... .|.|.+||.+. ..|. +|.|.. ++
T Consensus 507 ~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~g----~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~----g~ 578 (687)
T 3k6s_B 507 IYGQYCECDTINCERYNGQVCGGPGRGLCFCG----KCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC----NV 578 (687)
T ss_dssp EESTTSCEESSCSCEETTEETSHHHHEEEETT----EEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS----SC
T ss_pred ccccccccccccccCCCCcCcCCCCCCeEECC----EEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC----CE
Confidence 999999755666753 24666 7788642 79999999875 0243 455654 36
Q ss_pred EecCCCCCcC
Q psy6349 133 CHCICWDDLR 142 (145)
Q Consensus 133 c~c~~~~~~~ 142 (145)
|.|++||.+.
T Consensus 579 C~C~~Gy~G~ 588 (687)
T 3k6s_B 579 CECHSGYQLP 588 (687)
T ss_dssp BCCSTTCCTT
T ss_pred EECCCCCcCC
Confidence 9999999875
No 44
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.69 E-value=9.2e-09 Score=56.84 Aligned_cols=66 Identities=32% Similarity=1.068 Sum_probs=50.6
Q ss_pred cCCCCCCCC--CCCCCeeeeCCCceEEeCCCCcc----cCCccccCCCCcCCCCCCCCEEeeCCCCeEeeCC--CCCc
Q psy6349 45 EINECESDP--CQNGATCQDLIGGYSCQCARGFQ----GQNCELNVDDCKPNPCQNGGICHDLINHFSCSCP--SGLK 114 (145)
Q Consensus 45 ~~~~c~~~~--c~~~~~c~~~~~~~~c~c~~g~~----g~~c~~~~~~c~~~~~~~~~~c~~~~~~~~C~c~--~g~~ 114 (145)
++++|...+ | ..+.|.+..++|.|.|.+||. +..|. ++++|...+|. +.|+++.++|.|.|+ +||.
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~-dideC~~~~C~--~~C~n~~g~y~C~C~g~~G~~ 75 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSENMCA--QLCVNYPGGYTCYCDGKKGFK 75 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEE-CCCHHHHSCCS--SEECCCSSSCCEECCSSSCCB
T ss_pred ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCC-CcCeeCCCCCC--CEEEccCCCEEEECCCCcCCc
Confidence 467787766 6 567899889999999999997 66775 77777666665 688888888888884 4554
No 45
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.59 E-value=1e-07 Score=64.74 Aligned_cols=70 Identities=39% Similarity=0.992 Sum_probs=60.9
Q ss_pred cCCCCCCCCCCCCCeeeeCCCceEEeCCCCcccCCccccCCCCcC---CCCCCCCEEeeCCCCeEeeCCCCCccC
Q psy6349 45 EINECESDPCQNGATCQDLIGGYSCQCARGFQGQNCELNVDDCKP---NPCQNGGICHDLINHFSCSCPSGLKRE 116 (145)
Q Consensus 45 ~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~~~~~~c~~---~~~~~~~~c~~~~~~~~C~c~~g~~~~ 116 (145)
++++|...||.+++.|.+..+.|.|.|.+||.|..|..++++|.. ..|.+ .|++..++|.|.|++||.+.
T Consensus 4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG 76 (317)
T ss_dssp --CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred cCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEEecccccccc
Confidence 567888899999999998889999999999999999778889976 56765 99999999999999999875
No 46
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.59 E-value=2.9e-07 Score=64.86 Aligned_cols=101 Identities=27% Similarity=0.674 Sum_probs=58.3
Q ss_pred eeecCCCcccCCCCccCCCCCCCCCCCCCeeeeCCCceEEeCCCCcccCCccccCC----------CCc-CCCCCCCCEE
Q psy6349 30 RCHCMEGYTGSYCSIEINECESDPCQNGATCQDLIGGYSCQCARGFQGQNCELNVD----------DCK-PNPCQNGGIC 98 (145)
Q Consensus 30 ~C~c~~g~~~~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~~~~~----------~c~-~~~~~~~~~c 98 (145)
.|.|..+|.|..|. ..| .+|..++.|.. ..+.|.|.++|.|..|+.... .|. ...|...+.|
T Consensus 186 ~c~C~~g~~G~~C~---~~C--~~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C 258 (423)
T 2gy5_A 186 VRRCEAQKWGPECN---HLC--TACMNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFC 258 (423)
T ss_dssp ECSSCTTEESTTSC---EEC--CCCCTTCEECT--TTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEE
T ss_pred CCcCCCCCCCCCCC---CCC--CCCCCCCEEEC--CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEE
Confidence 35677777777764 123 25666777754 345688888887777753211 122 2334555556
Q ss_pred eeCCCCeEeeCCCCCccC---C---------------CCC-CCeeeeCCCceeEecCCCCCcC
Q psy6349 99 HDLINHFSCSCPSGLKRE---A---------------LCH-NGTCEDFGNSHRCHCICWDDLR 142 (145)
Q Consensus 99 ~~~~~~~~C~c~~g~~~~---~---------------~C~-~~~c~~~~g~~~c~c~~~~~~~ 142 (145)
. .+.+.|.|.+||.+. . .|. ++.|.+..+ |.|++||.+.
T Consensus 259 ~--~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~~---C~C~~G~~G~ 316 (423)
T 2gy5_A 259 L--PDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQG---CLCSPGWQGL 316 (423)
T ss_dssp E--TTTTEEECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTTE---EECCTTCBST
T ss_pred C--CCCCeEEeCCCcccccccCccCCCCcCCcccccccCCCCCEecCCCc---eECCCCCcCC
Confidence 3 345577777777653 1 233 446665432 8888887653
No 47
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.53 E-value=2.3e-08 Score=57.31 Aligned_cols=69 Identities=35% Similarity=0.833 Sum_probs=27.8
Q ss_pred ecCCCCCCCCCCCCCEeeeCCCceeeecCCCccc---CCCCccCCCCCC-CCCCCCCeeeeCCCceEEeCCCCcccC
Q psy6349 6 VSSPGLKREALCHNGTCEDFGNSHRCHCMEGYTG---SYCSIEINECES-DPCQNGATCQDLIGGYSCQCARGFQGQ 78 (145)
Q Consensus 6 ~~~~~~~~~~~c~~~~c~~~~~~~~C~c~~g~~~---~~c~~~~~~c~~-~~c~~~~~c~~~~~~~~c~c~~g~~g~ 78 (145)
.+++|......|. ..|++..++|.|.|.+||.+ ..|+ ++++|.. .+|. +.|++..++|.|.|..+|.+.
T Consensus 28 d~neC~~~~~~C~-~~C~n~~g~y~C~C~~Gy~g~~g~~C~-dideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 28 GTNECLDNNGGCS-YVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 100 (107)
T ss_dssp SCCGGGTGGGGCS-SEEECCSBSCEEECCTTCEEETTTEEE-C----------------------------------
T ss_pred cCccCcCCCCCCC-CEeEeCCCCeEEECCCCccccCCCccc-cccccCCCCCcC--CeeecCCCCEEEECCCCceEC
Confidence 3455544334453 48999999999999999997 7786 8899974 5674 689999999999999999743
No 48
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.49 E-value=1.8e-07 Score=46.77 Aligned_cols=44 Identities=27% Similarity=0.587 Sum_probs=30.3
Q ss_pred CCCCccCCCCCCCCCCCCCeee-----eCCCceEEeCCCCcccCCcccc
Q psy6349 40 SYCSIEINECESDPCQNGATCQ-----DLIGGYSCQCARGFQGQNCELN 83 (145)
Q Consensus 40 ~~c~~~~~~c~~~~c~~~~~c~-----~~~~~~~c~c~~g~~g~~c~~~ 83 (145)
..|+..+++|.+.||.+++.|. ...+.|.|.|.++|.|..|+..
T Consensus 2 ~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~ 50 (55)
T 3u7u_G 2 TSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNY 50 (55)
T ss_dssp -CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEE
T ss_pred CCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCcc
Confidence 4555567778888888888884 3456788888888888877643
No 49
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.48 E-value=7.7e-09 Score=63.72 Aligned_cols=94 Identities=23% Similarity=0.569 Sum_probs=65.0
Q ss_pred cCCCCCC-CCCCCCCeeeeCCCceEEeCCCCcc----cCCccccCCC--CcCC--CC--CCCCEEeeCCC----CeEeeC
Q psy6349 45 EINECES-DPCQNGATCQDLIGGYSCQCARGFQ----GQNCELNVDD--CKPN--PC--QNGGICHDLIN----HFSCSC 109 (145)
Q Consensus 45 ~~~~c~~-~~c~~~~~c~~~~~~~~c~c~~g~~----g~~c~~~~~~--c~~~--~~--~~~~~c~~~~~----~~~C~c 109 (145)
++++|.. .||. .+.|++..++|.|.|.+||. |..|. ++++ |... .+ ...+.|++..+ .|.|.|
T Consensus 2 dideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C 79 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV-DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCC 79 (162)
T ss_dssp CCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEE-CCCCEEEEEEC----------CEEEEEEEECHHHHHT
T ss_pred ccccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCccc-CCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeC
Confidence 5678874 7785 67999999999999999997 67776 5554 5432 12 23567777655 688999
Q ss_pred CCCCccCCCCCCCeeee-CCCceeEecCC--CCCcC
Q psy6349 110 PSGLKREALCHNGTCED-FGNSHRCHCIC--WDDLR 142 (145)
Q Consensus 110 ~~g~~~~~~C~~~~c~~-~~g~~~c~c~~--~~~~~ 142 (145)
++||.....|. .|.+ ..++|+|.|++ ||++.
T Consensus 80 ~~G~~~~~~C~--~C~~~~~~~y~C~C~~g~G~~~~ 113 (162)
T 1uzk_A 80 SLGKAWGTPCE--MCPAVNTSEYKILCPGGEGFRPN 113 (162)
T ss_dssp TTCCEETTTTE--ECCCTTSHHHHHHCTTCTTEEEC
T ss_pred CCCCCcCCCcc--cCCCCCCCCceeECCCCCCcccC
Confidence 99998655664 4543 45788899988 78765
No 50
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.39 E-value=3.9e-07 Score=63.79 Aligned_cols=66 Identities=36% Similarity=0.906 Sum_probs=50.5
Q ss_pred CCCCCCCCCCCCEeeeCCCceeeecCCCcc---cCCCCccCCCCCC-CCCCCCCeeeeCCCceEEeCCCCcccC
Q psy6349 9 PGLKREALCHNGTCEDFGNSHRCHCMEGYT---GSYCSIEINECES-DPCQNGATCQDLIGGYSCQCARGFQGQ 78 (145)
Q Consensus 9 ~~~~~~~~c~~~~c~~~~~~~~C~c~~g~~---~~~c~~~~~~c~~-~~c~~~~~c~~~~~~~~c~c~~g~~g~ 78 (145)
+|......|. +.|.+..++|.|.|.+||. +..|+ ++++|.. .+|. ..|.+..++|.|.|.++|.+.
T Consensus 2 eC~~~~~~c~-~~C~~~~~~y~C~C~~G~~~~~~~~C~-dideC~~~~~C~--~~C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 2 ECLDNNGGCS-HVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp CTTTTGGGCS-SEEEECSSSEEEECCTTEEECSSSCEE-ECCCCSTTSSCS--SCCBCCSSSCBCCCCTTCCCC
T ss_pred cccCCCCCCC-CEeECCCCCeEEECCCCCCcCCCCccc-CchhhhccCCCC--CccCCCccceeeecccccccc
Confidence 4544444553 5899999899999999997 77785 7889973 5564 478888899999999998743
No 51
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.25 E-value=2.2e-06 Score=64.83 Aligned_cols=100 Identities=28% Similarity=0.685 Sum_probs=60.8
Q ss_pred CCCCCCEeeeCCC--ceeeecCCCcccCCCCccCCCCCCCCCCCCCeeeeCCCceEEeCCCCcc---cCCccccCCCCcC
Q psy6349 15 ALCHNGTCEDFGN--SHRCHCMEGYTGSYCSIEINECESDPCQNGATCQDLIGGYSCQCARGFQ---GQNCELNVDDCKP 89 (145)
Q Consensus 15 ~~c~~~~c~~~~~--~~~C~c~~g~~~~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~---g~~c~~~~~~c~~ 89 (145)
.+|.++.|++... ...+.|..++.....+-.+++|..........|.+..++|.|.|..||. +..|. ++++|..
T Consensus 279 ~~C~~G~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l~~g~~C~-dideC~~ 357 (791)
T 3m0c_C 279 FKCHSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQD 357 (791)
T ss_dssp CCCTTSCCCCSSCCSCSSCCSSSSCSCCCTTBSCCSTTTGGGGCSSEEEECSBSEEEECCTTCEEETTTEEE-CCCCCSS
T ss_pred cccCCCcccccccccCCccccccccCccccccccccccccccCccccccCCCCCcccCCCCCCccCCCCccc-cCcccCC
Confidence 3454455554322 1123454443322111133445433222345888888999999999995 66775 7888862
Q ss_pred CCCCCCCEEeeCCCCeEeeCCCCCccC
Q psy6349 90 NPCQNGGICHDLINHFSCSCPSGLKRE 116 (145)
Q Consensus 90 ~~~~~~~~c~~~~~~~~C~c~~g~~~~ 116 (145)
.......|+++.++|.|.|.+||.+.
T Consensus 358 -~~~C~~~C~n~~gsy~C~C~~Gy~l~ 383 (791)
T 3m0c_C 358 -PDTCSQLCVNLEGGYKCQCEEGFQLD 383 (791)
T ss_dssp -SSSCTTTCCBCSSCBCCCCCSSEECC
T ss_pred -CCCCCCeeecCCCCceeecCCCCEeC
Confidence 23334578899999999999999764
No 52
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.22 E-value=3.5e-06 Score=63.00 Aligned_cols=99 Identities=29% Similarity=0.757 Sum_probs=63.7
Q ss_pred CCCCCCEeeeCCC--ceeeecCCCcccCCCCccCCCCCCCCCCCCCeeeeCCCceEEeCCCCcc---cCCccccCCCCc-
Q psy6349 15 ALCHNGTCEDFGN--SHRCHCMEGYTGSYCSIEINECESDPCQNGATCQDLIGGYSCQCARGFQ---GQNCELNVDDCK- 88 (145)
Q Consensus 15 ~~c~~~~c~~~~~--~~~C~c~~g~~~~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~---g~~c~~~~~~c~- 88 (145)
..|.++.|++... .+.+.|..+........++++|..........|.+..++|.|.|..||. +..|. ++++|.
T Consensus 261 ~~C~~g~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~~~~~~C~-dideC~~ 339 (699)
T 1n7d_A 261 FKCHSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQD 339 (699)
T ss_dssp CCCTTSCCCCSSCCSCSSCCSSSSCSCCCSSCCCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCCCSSSCCC-CCCCCSS
T ss_pred eecCCCcEeCCcccccccceecCcccccccccccccccccccCcCCCcccCCCCcEEeCCCCeEcCCCCccc-CccccCC
Confidence 4455556654321 1233455444332211145666544322345788888999999999997 66776 788886
Q ss_pred CCCCCCCCEEeeCCCCeEeeCCCCCccC
Q psy6349 89 PNPCQNGGICHDLINHFSCSCPSGLKRE 116 (145)
Q Consensus 89 ~~~~~~~~~c~~~~~~~~C~c~~g~~~~ 116 (145)
...| .+.|+++.++|.|.|++||.+.
T Consensus 340 ~~~C--~~~C~n~~g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 340 PDTC--SQLCVNLEGGYKCQCEEGFQLD 365 (699)
T ss_dssp SSSC--TTTCCBCSSCBCCCCCSSCBCC
T ss_pred CCcc--ccccccCCCCeeeeeecccccC
Confidence 3444 3578999999999999999864
No 53
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.20 E-value=6e-06 Score=61.74 Aligned_cols=61 Identities=23% Similarity=0.575 Sum_probs=43.5
Q ss_pred CCCCcCCCCCCCCEEeeCCCCeEeeCCCCCccC--------CCCC-----CCeeeeCCCceeEecCCCCCcCCC
Q psy6349 84 VDDCKPNPCQNGGICHDLINHFSCSCPSGLKRE--------ALCH-----NGTCEDFGNSHRCHCICWDDLRNS 144 (145)
Q Consensus 84 ~~~c~~~~~~~~~~c~~~~~~~~C~c~~g~~~~--------~~C~-----~~~c~~~~g~~~c~c~~~~~~~~~ 144 (145)
+++|........+.|.++.++|.|.|++||.+. ..|. ...|.++.|+|+|.|++||.+..+
T Consensus 294 ~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~~~~~~C~dideC~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~ 367 (699)
T 1n7d_A 294 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPH 367 (699)
T ss_dssp CCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCCCSSSCCCCCCCCSSSSSCTTTCCBCSSCBCCCCCSSCBCCSS
T ss_pred cccccccccCcCCCcccCCCCcEEeCCCCeEcCCCCcccCccccCCCCccccccccCCCCeeeeeecccccCCC
Confidence 345543322234578888899999999999841 1121 247899999999999999998653
No 54
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.19 E-value=7.8e-06 Score=57.64 Aligned_cols=94 Identities=31% Similarity=0.868 Sum_probs=63.8
Q ss_pred CCC-CCEeeeCCCceeeecCCCcccCCCCccCC----------CCC-CCCCCCCCeeeeCCCceEEeCCCCcccCCcccc
Q psy6349 16 LCH-NGTCEDFGNSHRCHCMEGYTGSYCSIEIN----------ECE-SDPCQNGATCQDLIGGYSCQCARGFQGQNCELN 83 (145)
Q Consensus 16 ~c~-~~~c~~~~~~~~C~c~~g~~~~~c~~~~~----------~c~-~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~~~ 83 (145)
+|. ++.|.+ +.+.|.|.+||.|..|+.... .|. ..+|...+.|. .+.+.|.|.++|.|..|...
T Consensus 204 ~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~--~~~~~C~C~~G~~G~~C~~~ 279 (423)
T 2gy5_A 204 ACMNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCL--PDPYGCSCATGWKGLQCNEA 279 (423)
T ss_dssp CCCTTCEECT--TTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEE--TTTTEEECCBTCBSGGGCBC
T ss_pred CCCCCCEEEC--CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEEC--CCCCeEEeCCCcccccccCc
Confidence 676 478986 346899999999999963211 232 23455566674 45788999999999888631
Q ss_pred C------CCCc-CCCCCCCCEEeeCCCCeEeeCCCCCccC
Q psy6349 84 V------DDCK-PNPCQNGGICHDLINHFSCSCPSGLKRE 116 (145)
Q Consensus 84 ~------~~c~-~~~~~~~~~c~~~~~~~~C~c~~g~~~~ 116 (145)
- ..|. .-.|.+++.|.+.. .|.|.+||.+.
T Consensus 280 C~~G~~G~~C~~~C~C~ngg~C~~~~---~C~C~~G~~G~ 316 (423)
T 2gy5_A 280 CHPGFYGPDCKLRCSCNNGEMCDRFQ---GCLCSPGWQGL 316 (423)
T ss_dssp CCTTBCSBTTCCBCCCTTCCEEETTT---EEECCTTCBST
T ss_pred cCCCCcCCcccccccCCCCCEecCCC---ceECCCCCcCC
Confidence 1 1222 11467778887654 49999999985
No 55
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.17 E-value=2.7e-06 Score=59.54 Aligned_cols=67 Identities=34% Similarity=0.928 Sum_probs=55.1
Q ss_pred CCCCCCCCCCCCeeeeCCCceEEeCCCCcc---cCCccccCCCCcC-CCCCCCCEEeeCCCCeEeeCCCCCccC
Q psy6349 47 NECESDPCQNGATCQDLIGGYSCQCARGFQ---GQNCELNVDDCKP-NPCQNGGICHDLINHFSCSCPSGLKRE 116 (145)
Q Consensus 47 ~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~---g~~c~~~~~~c~~-~~~~~~~~c~~~~~~~~C~c~~g~~~~ 116 (145)
++|...++...+.|.+..++|.|.|.+||. +..|. ++++|.. ..|. ..|.++.++|.|.|.+||.+.
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~-dideC~~~~~C~--~~C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEE-ECCCCSTTSSCS--SCCBCCSSSCBCCCCTTCCCC
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCccc-CchhhhccCCCC--CccCCCccceeeecccccccc
Confidence 356666666678999999999999999997 78896 8899963 4454 489999999999999999864
No 56
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.15 E-value=5.4e-07 Score=62.76 Aligned_cols=67 Identities=25% Similarity=0.740 Sum_probs=13.3
Q ss_pred ecCCCCCCCCCCCCCEeeeCCCceeeecCCCcc----cCCCCccCCCCC-CCCCCCCCeeeeCCCceEEeCCCCcc
Q psy6349 6 VSSPGLKREALCHNGTCEDFGNSHRCHCMEGYT----GSYCSIEINECE-SDPCQNGATCQDLIGGYSCQCARGFQ 76 (145)
Q Consensus 6 ~~~~~~~~~~~c~~~~c~~~~~~~~C~c~~g~~----~~~c~~~~~~c~-~~~c~~~~~c~~~~~~~~c~c~~g~~ 76 (145)
.+++|......|.+ .|.+..++|.|.|.+||. +..|+ ++++|. ..+|.. .|.+..++|.|.|.++|.
T Consensus 2 ~~~~C~~~~~~c~~-~C~~~~g~~~C~C~~G~~l~~~~~~C~-d~~eC~~~~~C~~--~C~~~~g~~~C~C~~g~~ 73 (386)
T 3v65_B 2 GEENCNVNNGGCAQ-KCQMIRGAVQCTCHTGYRLTEDGRTCQ-DVNECAEEGYCSQ--GCTNSEGAFQCWCEAGYE 73 (386)
T ss_dssp ----------------------------------------------------CCTT--EEC-----CCEECCTTEE
T ss_pred CcCcccCCCCCCCC-CCcCCCCCcEeECCCCceECCCCCccC-ccceeCCcCcccC--cCCCCCCCCeEEECCCce
Confidence 35666655556753 788777888999999997 77884 788886 456653 488888889999999886
No 57
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.15 E-value=4.7e-06 Score=38.56 Aligned_cols=31 Identities=52% Similarity=1.271 Sum_probs=12.7
Q ss_pred CCCCCCCCCCCeeeeCCCceEEeCCCCcccC
Q psy6349 48 ECESDPCQNGATCQDLIGGYSCQCARGFQGQ 78 (145)
Q Consensus 48 ~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~ 78 (145)
+|...||.+++.|++..++|.|.|..+|.|.
T Consensus 5 ~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~ 35 (39)
T 1edm_B 5 QCESNPCLNGGSCKDDINSYECWCPFGFEGK 35 (39)
T ss_dssp TTTTCCCCTTCEEEEETTEEEEECCTTCCST
T ss_pred cCCCCCCCCCCEeEcCCCceEeECCCCCcCC
Confidence 3333344444444433344444444444433
No 58
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.09 E-value=7.3e-07 Score=62.10 Aligned_cols=67 Identities=25% Similarity=0.744 Sum_probs=13.8
Q ss_pred cCCCCCCCCCCCCCeeeeCCCceEEeCCCCcc----cCCccccCCCCc-CCCCCCCCEEeeCCCCeEeeCCCCCc
Q psy6349 45 EINECESDPCQNGATCQDLIGGYSCQCARGFQ----GQNCELNVDDCK-PNPCQNGGICHDLINHFSCSCPSGLK 114 (145)
Q Consensus 45 ~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~----g~~c~~~~~~c~-~~~~~~~~~c~~~~~~~~C~c~~g~~ 114 (145)
++++|...++.....|.+..++|.|.|.+||. +..|. ++++|. ...|. ..|+++.++|.|.|.+||.
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~-d~~eC~~~~~C~--~~C~~~~g~~~C~C~~g~~ 73 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQ-DVNECAEEGYCS--QGCTNSEGAFQCWCEAGYE 73 (386)
T ss_dssp ---------------------------------------------------CCT--TEEC-----CCEECCTTEE
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccC-ccceeCCcCccc--CcCCCCCCCCeEEECCCce
Confidence 45778776655566888778889999999997 78884 888886 45565 3599999999999999997
No 59
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.97 E-value=6.4e-06 Score=52.92 Aligned_cols=90 Identities=31% Similarity=0.735 Sum_probs=57.2
Q ss_pred CCCC-CCEeeeCCCceeeecCCCcccCCCCccCC---------CCC----CCCCCCCCeeeeCCCceEEeCCCC------
Q psy6349 15 ALCH-NGTCEDFGNSHRCHCMEGYTGSYCSIEIN---------ECE----SDPCQNGATCQDLIGGYSCQCARG------ 74 (145)
Q Consensus 15 ~~c~-~~~c~~~~~~~~C~c~~g~~~~~c~~~~~---------~c~----~~~c~~~~~c~~~~~~~~c~c~~g------ 74 (145)
..|. +|.|.. ..|.|.+||.|..|+.... .|. ..+|..++.|+. ..|.|..+
T Consensus 96 ~~Csg~G~C~~----g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw~~~~~ 167 (217)
T 2p28_B 96 SLCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGKL 167 (217)
T ss_dssp CTTTTSEEEET----TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCCSTTCC
T ss_pred CccCCCceEEC----CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCCCCccc
Confidence 3565 477763 3799999999999864322 243 235666677762 26889888
Q ss_pred cccCCccccCCCCcCC---CCCCC--CEEeeCCCCeEeeCCCCCccC
Q psy6349 75 FQGQNCELNVDDCKPN---PCQNG--GICHDLINHFSCSCPSGLKRE 116 (145)
Q Consensus 75 ~~g~~c~~~~~~c~~~---~~~~~--~~c~~~~~~~~C~c~~g~~~~ 116 (145)
|.|..|+.+...|... .|..+ +.|... .|.|.+||.+.
T Consensus 168 ~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~g----~C~C~~G~~G~ 210 (217)
T 2p28_B 168 IYGQYCECDTINCERYNGQVCGGPGRGLCFCG----KCRCHPGFEGS 210 (217)
T ss_dssp EESTTSCEESSCSCEETTEETTCTTTEEEETT----EEEECTTEEST
T ss_pred EECCCcccCCccCCCCCCCCCCCCCCcEEeCC----eeECCCCCccC
Confidence 5788886444555432 35554 666532 67777777664
No 60
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.90 E-value=1.5e-05 Score=39.79 Aligned_cols=43 Identities=23% Similarity=0.645 Sum_probs=32.4
Q ss_pred cCCccccCCCCcCCCCCCCCEEe-----eCCCCeEeeCCCCCccCCCCC
Q psy6349 77 GQNCELNVDDCKPNPCQNGGICH-----DLINHFSCSCPSGLKREALCH 120 (145)
Q Consensus 77 g~~c~~~~~~c~~~~~~~~~~c~-----~~~~~~~C~c~~g~~~~~~C~ 120 (145)
|..|...+++|...+|.+++.|. +....|.|.|++||.+. .|.
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~-~CE 48 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGD-RCQ 48 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEEST-TSC
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCC-CcC
Confidence 34566678899999999999994 44568999999999986 453
No 61
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=97.80 E-value=1.4e-05 Score=59.37 Aligned_cols=89 Identities=29% Similarity=0.774 Sum_probs=65.7
Q ss_pred CCC-CCEeeeCCCceeeecC------CCcccCCCCccCCCCCC---CCCCC--CCeeeeCCCceEEeCCCCcccCCccc-
Q psy6349 16 LCH-NGTCEDFGNSHRCHCM------EGYTGSYCSIEINECES---DPCQN--GATCQDLIGGYSCQCARGFQGQNCEL- 82 (145)
Q Consensus 16 ~c~-~~~c~~~~~~~~C~c~------~g~~~~~c~~~~~~c~~---~~c~~--~~~c~~~~~~~~c~c~~g~~g~~c~~- 82 (145)
+|. +|.|.. + .|.|. +||.|..|+.+...|.. .+|.. ++.|.. ..|.|.+||.|..|..
T Consensus 483 ~Cs~~G~C~~--G--~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~----g~C~C~~G~~G~~Cec~ 554 (687)
T 3k6s_B 483 ICSGLGDCVC--G--QCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGSACQCE 554 (687)
T ss_dssp GGGSSEEEET--T--EEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEET----TEEEECTTCCSTTSCSC
T ss_pred cCCCCCEEeC--C--EEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEEC----CEEEcCCCCcCCCCccC
Confidence 475 478873 2 79999 99999999755677763 35766 677863 2799999999999862
Q ss_pred -cCCCCcCC---CCCCCCEEeeCCCCeEeeCCCCCccC
Q psy6349 83 -NVDDCKPN---PCQNGGICHDLINHFSCSCPSGLKRE 116 (145)
Q Consensus 83 -~~~~c~~~---~~~~~~~c~~~~~~~~C~c~~g~~~~ 116 (145)
....|... .|..++.|.. ..|.|.+||.+.
T Consensus 555 ~~~~~C~~~~g~~Cs~~G~C~~----g~C~C~~Gy~G~ 588 (687)
T 3k6s_B 555 RTTEGCLNPRRVECSGRGRCRC----NVCECHSGYQLP 588 (687)
T ss_dssp CSSCTTBCTTCSBTSSSCCBCS----SCBCCSTTCCTT
T ss_pred CCCCCCCCCCCCCCCCCCcCCC----CEEECCCCCcCC
Confidence 24566543 5777788865 279999999986
No 62
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.77 E-value=4.1e-05 Score=35.25 Aligned_cols=33 Identities=48% Similarity=1.131 Sum_probs=24.0
Q ss_pred CCCCcCCCCCCCCEEeeCCCCeEeeCCCCCccC
Q psy6349 84 VDDCKPNPCQNGGICHDLINHFSCSCPSGLKRE 116 (145)
Q Consensus 84 ~~~c~~~~~~~~~~c~~~~~~~~C~c~~g~~~~ 116 (145)
+++|...+|.+++.|++..++|.|.|++||.+.
T Consensus 3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~ 35 (39)
T 1edm_B 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGK 35 (39)
T ss_dssp CCTTTTCCCCTTCEEEEETTEEEEECCTTCCST
T ss_pred cccCCCCCCCCCCEeEcCCCceEeECCCCCcCC
Confidence 456666677777788777777888888887764
No 63
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.76 E-value=6.2e-05 Score=37.22 Aligned_cols=27 Identities=41% Similarity=1.021 Sum_probs=12.5
Q ss_pred CCCC-CEee--eCCCceeeecCCCcccCCC
Q psy6349 16 LCHN-GTCE--DFGNSHRCHCMEGYTGSYC 42 (145)
Q Consensus 16 ~c~~-~~c~--~~~~~~~C~c~~g~~~~~c 42 (145)
+|.| +.|+ +..+.|.|.|.+||+|..|
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~C 42 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRC 42 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTCCSSSS
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCCcCCcC
Confidence 4443 3444 3344444555555544444
No 64
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.76 E-value=4e-05 Score=36.56 Aligned_cols=29 Identities=34% Similarity=0.812 Sum_probs=21.1
Q ss_pred CCCC-CEee--eCCCceeeecCCCcccCCCCc
Q psy6349 16 LCHN-GTCE--DFGNSHRCHCMEGYTGSYCSI 44 (145)
Q Consensus 16 ~c~~-~~c~--~~~~~~~C~c~~g~~~~~c~~ 44 (145)
+|.| +.|. +..+.|.|.|.+||.|..|+.
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence 6765 6786 455678888888888887753
No 65
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.72 E-value=0.00011 Score=36.27 Aligned_cols=34 Identities=29% Similarity=0.861 Sum_probs=28.5
Q ss_pred CCCCCCCeee--eCCCceEEeCCCCcccCCccccCC
Q psy6349 52 DPCQNGATCQ--DLIGGYSCQCARGFQGQNCELNVD 85 (145)
Q Consensus 52 ~~c~~~~~c~--~~~~~~~c~c~~g~~g~~c~~~~~ 85 (145)
.||.+++.|+ ...+.|.|.|..+|.|..|+..+.
T Consensus 12 ~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~~ 47 (53)
T 1egf_A 12 GYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRDL 47 (53)
T ss_dssp CSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCSC
T ss_pred CcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccCc
Confidence 3788889998 678899999999999999975443
No 66
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.71 E-value=7.4e-05 Score=35.60 Aligned_cols=31 Identities=29% Similarity=0.892 Sum_probs=23.4
Q ss_pred CCCCCCeee--eCCCceEEeCCCCcccCCcccc
Q psy6349 53 PCQNGATCQ--DLIGGYSCQCARGFQGQNCELN 83 (145)
Q Consensus 53 ~c~~~~~c~--~~~~~~~c~c~~g~~g~~c~~~ 83 (145)
||.+++.|. ...+.|.|.|..+|.|..|+.+
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ 42 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTR 42 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCEE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCcc
Confidence 777778886 4567788888888888877643
No 67
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.63 E-value=0.00011 Score=37.73 Aligned_cols=38 Identities=26% Similarity=0.605 Sum_probs=29.0
Q ss_pred CCCCCC-CEeee-----CCCceeeecCCCcccCCCCccCCCCCC
Q psy6349 14 EALCHN-GTCED-----FGNSHRCHCMEGYTGSYCSIEINECES 51 (145)
Q Consensus 14 ~~~c~~-~~c~~-----~~~~~~C~c~~g~~~~~c~~~~~~c~~ 51 (145)
..+|.| |.|++ ..+.|.|.|.+||.|..|+.+++.+..
T Consensus 11 ~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~~~ 54 (63)
T 1hae_A 11 KTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQ 54 (63)
T ss_dssp HTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSCT
T ss_pred CCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCcccc
Confidence 456875 78986 456789999999999999766666543
No 68
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.60 E-value=4.3e-05 Score=39.24 Aligned_cols=42 Identities=36% Similarity=0.619 Sum_probs=33.7
Q ss_pred CCCCCCCCCCCCeeee-----CCCceEEeCCCCcccCCccccCCCCc
Q psy6349 47 NECESDPCQNGATCQD-----LIGGYSCQCARGFQGQNCELNVDDCK 88 (145)
Q Consensus 47 ~~c~~~~c~~~~~c~~-----~~~~~~c~c~~g~~g~~c~~~~~~c~ 88 (145)
++|.+.||.+++.|.. ..+.|.|.|..||.|..|+.+++++.
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~~ 53 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKV 53 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSC
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCccc
Confidence 4566778988899986 56789999999999999976666554
No 69
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.54 E-value=2.1e-05 Score=40.07 Aligned_cols=36 Identities=31% Similarity=0.879 Sum_probs=22.5
Q ss_pred CCCCCCCCCCCC--CeeeeCCCceEEeCCCCcc-cCCcc
Q psy6349 46 INECESDPCQNG--ATCQDLIGGYSCQCARGFQ-GQNCE 81 (145)
Q Consensus 46 ~~~c~~~~c~~~--~~c~~~~~~~~c~c~~g~~-g~~c~ 81 (145)
+++|.+.||.++ +.|.+..++|.|.|.+||. |..|.
T Consensus 11 ~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~ 49 (61)
T 2k2s_B 11 PAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGT 49 (61)
T ss_dssp CCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred CCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence 455655666655 5666666666666666666 66553
No 70
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.53 E-value=8.2e-05 Score=56.45 Aligned_cols=54 Identities=39% Similarity=0.989 Sum_probs=45.0
Q ss_pred EeeeCCCceeeecCCCcc---cCCCCccCCCCCCCCCCCCCeeeeCCCceEEeCCCCcc
Q psy6349 21 TCEDFGNSHRCHCMEGYT---GSYCSIEINECESDPCQNGATCQDLIGGYSCQCARGFQ 76 (145)
Q Consensus 21 ~c~~~~~~~~C~c~~g~~---~~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~ 76 (145)
.|.+..++|.|.|.+||. +..|+ ++++|.. +......|.+..++|.|.|.+||.
T Consensus 325 ~C~~~~~~y~C~C~~Gy~l~~g~~C~-dideC~~-~~~C~~~C~n~~gsy~C~C~~Gy~ 381 (791)
T 3m0c_C 325 VCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQ 381 (791)
T ss_dssp EEEECSBSEEEECCTTCEEETTTEEE-CCCCCSS-SSSCTTTCCBCSSCBCCCCCSSEE
T ss_pred cccCCCCCcccCCCCCCccCCCCccc-cCcccCC-CCCCCCeeecCCCCceeecCCCCE
Confidence 899999999999999996 77785 7899962 333345899999999999999996
No 71
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.50 E-value=0.00014 Score=34.79 Aligned_cols=29 Identities=34% Similarity=0.864 Sum_probs=23.1
Q ss_pred CCCCCCEeeeCC--CceeeecCCCcccCCCC
Q psy6349 15 ALCHNGTCEDFG--NSHRCHCMEGYTGSYCS 43 (145)
Q Consensus 15 ~~c~~~~c~~~~--~~~~C~c~~g~~~~~c~ 43 (145)
.+|.||.|.... +.|.|.|.+||+|..|+
T Consensus 12 ~pC~nG~C~~~~~~~~~~C~C~~GytG~~Ce 42 (46)
T 1k36_A 12 GYCLHGQCIYLVDMSQNYCRCEVGYTGVRCE 42 (46)
T ss_dssp SSCSSEEEEEETTTTEEEEEECTTCSSTTSC
T ss_pred CCCCCCEeeccCCCCCEEEECCCCCccCCCC
Confidence 578778888643 57889999999998885
No 72
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.40 E-value=0.00011 Score=37.46 Aligned_cols=44 Identities=27% Similarity=0.588 Sum_probs=33.0
Q ss_pred cCCCCcCCCCCCC--CEEeeCCCCeEeeCCCCCc-cCCCCC-CCeeeeC
Q psy6349 83 NVDDCKPNPCQNG--GICHDLINHFSCSCPSGLK-REALCH-NGTCEDF 127 (145)
Q Consensus 83 ~~~~c~~~~~~~~--~~c~~~~~~~~C~c~~g~~-~~~~C~-~~~c~~~ 127 (145)
.+++|...+|.++ +.|++..++|.|.|++||. +. .|. .-.|.+.
T Consensus 10 ~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~-~C~~~~~C~~~ 57 (61)
T 2k2s_B 10 TPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISL-DGTGNVTCIVR 57 (61)
T ss_dssp SCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEE-CSSSCEEEEES
T ss_pred CCCcCcCCCCcCCCccccccCCCceEeECCCCCccCC-CCCCCCEeccc
Confidence 3456766778887 7999999999999999999 75 464 3345544
No 73
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.35 E-value=5.7e-05 Score=53.92 Aligned_cols=77 Identities=27% Similarity=0.742 Sum_probs=34.9
Q ss_pred eeecCCCcccCCCCccCCCCCCCCCCCCCeeeeCCCceEEeCCCCcccCCccccCCCCcCCCCCCCCEEeeCCCCeEeeC
Q psy6349 30 RCHCMEGYTGSYCSIEINECESDPCQNGATCQDLIGGYSCQCARGFQGQNCELNVDDCKPNPCQNGGICHDLINHFSCSC 109 (145)
Q Consensus 30 ~C~c~~g~~~~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~~~~~~c~~~~~~~~~~c~~~~~~~~C~c 109 (145)
...|..+|.+..|. .+.|.. +|.+ +.|... ..|.|.++|.|..|. ...|.. .|.+++.|+.. +.|.|
T Consensus 378 p~~C~~~~~g~~c~--~~~C~~-~C~n-G~C~~~---~~C~C~~G~~G~~C~--~~~C~~-~C~~~g~C~~~---~~C~C 444 (463)
T 2wg3_C 378 PEECRATVQPAQTL--TSECSR-LCRN-GYCTPT---GKCCCSPGWEGDFCR--TAKCEP-ACRHGGVCVRP---NKCLC 444 (463)
T ss_dssp CGGGCCCCCCCCCC--CCHHHH-HCCS-EEECTT---SCEEECTTEESTTSC--EECC----------------------
T ss_pred cccCCCCCcCCCCc--cccccC-CCCC-CccCCC---CeECCCCCcCCCcCC--cCcCCC-CCCCCCEECCC---CEEEC
Confidence 45788888888774 456654 4765 678643 379999999999995 346765 78888899865 38999
Q ss_pred CCCCccCCCCC
Q psy6349 110 PSGLKREALCH 120 (145)
Q Consensus 110 ~~g~~~~~~C~ 120 (145)
.+||.+. .|.
T Consensus 445 ~~G~~G~-~C~ 454 (463)
T 2wg3_C 445 KKGYLGP-QCE 454 (463)
T ss_dssp -----------
T ss_pred CCCcccC-CCC
Confidence 9999885 454
No 74
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.24 E-value=0.00027 Score=34.89 Aligned_cols=31 Identities=29% Similarity=0.852 Sum_probs=23.0
Q ss_pred CCCCCC-CEee--eCCCceeeecCCCcccCCCCc
Q psy6349 14 EALCHN-GTCE--DFGNSHRCHCMEGYTGSYCSI 44 (145)
Q Consensus 14 ~~~c~~-~~c~--~~~~~~~C~c~~g~~~~~c~~ 44 (145)
..+|.| |.|. +..+.|.|.|.+||+|..|+.
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~ 44 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY 44 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCc
Confidence 456765 6887 455678888888888888864
No 75
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.20 E-value=0.00034 Score=33.42 Aligned_cols=35 Identities=34% Similarity=0.884 Sum_probs=24.5
Q ss_pred CCCCCC---CCCCCCCeeeeCC--CceEEeCCCCcccCCcc
Q psy6349 46 INECES---DPCQNGATCQDLI--GGYSCQCARGFQGQNCE 81 (145)
Q Consensus 46 ~~~c~~---~~c~~~~~c~~~~--~~~~c~c~~g~~g~~c~ 81 (145)
+++|.+ .||.+ +.|.... +.|.|.|.+||.|..|+
T Consensus 3 i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce 42 (46)
T 1k36_A 3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCE 42 (46)
T ss_dssp EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSC
T ss_pred cccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCC
Confidence 455655 67777 6776533 57888888888888775
No 76
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=97.11 E-value=0.00043 Score=34.40 Aligned_cols=39 Identities=28% Similarity=0.521 Sum_probs=25.4
Q ss_pred CCCCCCCCCCCCEeeeCCCceeeecCCCcc----cCCCCccCCCC
Q psy6349 9 PGLKREALCHNGTCEDFGNSHRCHCMEGYT----GSYCSIEINEC 49 (145)
Q Consensus 9 ~~~~~~~~c~~~~c~~~~~~~~C~c~~g~~----~~~c~~~~~~c 49 (145)
+|......|. ..|++..|+|.|.|.+||. +..|. ++++|
T Consensus 3 EC~~~~~~C~-~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~-didec 45 (55)
T 2jkh_L 3 LCSLDNGDCD-QFCHEEQNSVVCSCARGYTLADNGKACI-PTGPY 45 (55)
T ss_dssp CTTTGGGGCS-SEEEEETTEEEEECCTTEEECTTSSCEE-ESSSS
T ss_pred cccCCCCCcC-cEeEcCCCCeEEeCCCCCEECCCCCeec-cCccc
Confidence 3443445564 3788888888899988886 44553 45554
No 77
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.08 E-value=8.6e-05 Score=53.02 Aligned_cols=64 Identities=23% Similarity=0.548 Sum_probs=24.4
Q ss_pred EeCCCCcccCCccccCCCCcCCCCCCCCEEeeCCCCeEeeCCCCCccC--------CCCC-CCeeeeCCCceeEecCCCC
Q psy6349 69 CQCARGFQGQNCELNVDDCKPNPCQNGGICHDLINHFSCSCPSGLKRE--------ALCH-NGTCEDFGNSHRCHCICWD 139 (145)
Q Consensus 69 c~c~~g~~g~~c~~~~~~c~~~~~~~~~~c~~~~~~~~C~c~~g~~~~--------~~C~-~~~c~~~~g~~~c~c~~~~ 139 (145)
..|..+|.+..|. ...|.. .|.+ +.|+.. ..|.|.+||.+. ..|. ++.|.+. ++|.|++||
T Consensus 379 ~~C~~~~~g~~c~--~~~C~~-~C~n-G~C~~~---~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~~---~~C~C~~G~ 448 (463)
T 2wg3_C 379 EECRATVQPAQTL--TSECSR-LCRN-GYCTPT---GKCCCSPGWEGDFCRTAKCEPACRHGGVCVRP---NKCLCKKGY 448 (463)
T ss_dssp GGGCCCCCCCCCC--CCHHHH-HCCS-EEECTT---SCEEECTTEESTTSCEECC-------------------------
T ss_pred ccCCCCCcCCCCc--cccccC-CCCC-CccCCC---CeECCCCCcCCCcCCcCcCCCCCCCCCEECCC---CEEECCCCc
Confidence 3466666666653 234443 3554 677543 368888888875 1333 3566654 478888888
Q ss_pred CcC
Q psy6349 140 DLR 142 (145)
Q Consensus 140 ~~~ 142 (145)
++.
T Consensus 449 ~G~ 451 (463)
T 2wg3_C 449 LGP 451 (463)
T ss_dssp ---
T ss_pred ccC
Confidence 754
No 78
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.82 E-value=0.00019 Score=35.29 Aligned_cols=29 Identities=52% Similarity=1.003 Sum_probs=14.7
Q ss_pred CCCCCCeeee----CCCceEEeCCCCcccCCcc
Q psy6349 53 PCQNGATCQD----LIGGYSCQCARGFQGQNCE 81 (145)
Q Consensus 53 ~c~~~~~c~~----~~~~~~c~c~~g~~g~~c~ 81 (145)
||.+++.|+. ..+.|.|.|..+|.|..|+
T Consensus 15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce 47 (52)
T 3ca7_A 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47 (52)
T ss_dssp TSCTTCEEEEEEETTEEEEEEECCTTEESTTSC
T ss_pred cCCCCCEEecCccCCCCCEEEECCCCCcCCCCc
Confidence 3444555543 1234556666666555554
No 79
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.80 E-value=0.00048 Score=34.22 Aligned_cols=20 Identities=30% Similarity=0.433 Sum_probs=10.5
Q ss_pred eeeeCCCceeEecCCCCCcC
Q psy6349 123 TCEDFGNSHRCHCICWDDLR 142 (145)
Q Consensus 123 ~c~~~~g~~~c~c~~~~~~~ 142 (145)
.|.|+.|+|+|.|++||.|.
T Consensus 14 ~C~nt~Gsy~C~C~~Gy~L~ 33 (55)
T 2jkh_L 14 FCHEEQNSVVCSCARGYTLA 33 (55)
T ss_dssp EEEEETTEEEEECCTTEEEC
T ss_pred EeEcCCCCeEEeCCCCCEEC
Confidence 45555555555555555543
No 80
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.75 E-value=0.00075 Score=33.08 Aligned_cols=21 Identities=19% Similarity=0.434 Sum_probs=12.9
Q ss_pred CeeeeCCCceeEecCCCCCcC
Q psy6349 122 GTCEDFGNSHRCHCICWDDLR 142 (145)
Q Consensus 122 ~~c~~~~g~~~c~c~~~~~~~ 142 (145)
..|.++.|+|+|.|++||.|.
T Consensus 24 ~~C~n~~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 24 HLCHNYVGGYFCSCRPGYELQ 44 (53)
T ss_dssp SEEEEETTEEEEECSTTCEEC
T ss_pred CEeECCCCCeEEECCCCCeEC
Confidence 356666666666666666554
No 81
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.54 E-value=0.0016 Score=31.84 Aligned_cols=29 Identities=28% Similarity=0.597 Sum_probs=23.4
Q ss_pred CCCCC-CEeee----CCCceeeecCCCcccCCCC
Q psy6349 15 ALCHN-GTCED----FGNSHRCHCMEGYTGSYCS 43 (145)
Q Consensus 15 ~~c~~-~~c~~----~~~~~~C~c~~g~~~~~c~ 43 (145)
.+|.| +.|+. ..+.|.|.|..||.|..|+
T Consensus 14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce 47 (52)
T 3ca7_A 14 WYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47 (52)
T ss_dssp HTSCTTCEEEEEEETTEEEEEEECCTTEESTTSC
T ss_pred CcCCCCCEEecCccCCCCCEEEECCCCCcCCCCc
Confidence 36876 69986 3456899999999999996
No 82
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.48 E-value=0.004 Score=30.35 Aligned_cols=24 Identities=25% Similarity=0.701 Sum_probs=17.3
Q ss_pred CCCCCCEeeeCCCceeeecCCCccc
Q psy6349 15 ALCHNGTCEDFGNSHRCHCMEGYTG 39 (145)
Q Consensus 15 ~~c~~~~c~~~~~~~~C~c~~g~~~ 39 (145)
.+|. ..|.+..|+|.|.|.+||.+
T Consensus 20 ~~C~-~~C~n~~Gsy~C~C~~Gy~~ 43 (53)
T 1apq_A 20 PQCQ-HLCHNYVGGYFCSCRPGYEL 43 (53)
T ss_dssp CTTS-SEEEEETTEEEEECSTTCEE
T ss_pred CCCC-CEeECCCCCeEEECCCCCeE
Confidence 5564 47888778888888887763
No 83
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=96.33 E-value=0.0034 Score=44.20 Aligned_cols=89 Identities=22% Similarity=0.487 Sum_probs=27.5
Q ss_pred CEeeeCCCceeeecCCCcccCCCCccCCCCCCCCCCCCCee-eeCCCceEEe-CCCCcccCCccccCCCCcCCCCCCCCE
Q psy6349 20 GTCEDFGNSHRCHCMEGYTGSYCSIEINECESDPCQNGATC-QDLIGGYSCQ-CARGFQGQNCELNVDDCKPNPCQNGGI 97 (145)
Q Consensus 20 ~~c~~~~~~~~C~c~~g~~~~~c~~~~~~c~~~~c~~~~~c-~~~~~~~~c~-c~~g~~g~~c~~~~~~c~~~~~~~~~~ 97 (145)
..|....+.+.|.|..++.|..|+.-.......|+..+..+ ........|. |.-.+.+..|.... .+|.+++.
T Consensus 304 s~C~~~~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t-----~~C~ngg~ 378 (426)
T 3zyj_B 304 TVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNEL-----LHCQNGGT 378 (426)
T ss_dssp SCEEEETTEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC------------------------
T ss_pred hhcCCCCCCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCc-----ccCCCCCC
Confidence 47887777789999999999999632222222233222111 1111122232 22223345564222 35677777
Q ss_pred EeeCCCCeEeeCCCCCccC
Q psy6349 98 CHDLINHFSCSCPSGLKRE 116 (145)
Q Consensus 98 c~~~~~~~~C~c~~g~~~~ 116 (145)
|.+.. .|.|++||.+.
T Consensus 379 C~~~~---~C~C~~G~~G~ 394 (426)
T 3zyj_B 379 CHNNV---RCLCPAAYTGI 394 (426)
T ss_dssp -------------------
T ss_pred cCCCC---CCcCCCCCcCC
Confidence 86654 79999999985
No 84
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=96.30 E-value=0.00065 Score=33.19 Aligned_cols=21 Identities=24% Similarity=0.437 Sum_probs=14.6
Q ss_pred eeeeCCCceeEecCCCCCcCC
Q psy6349 123 TCEDFGNSHRCHCICWDDLRN 143 (145)
Q Consensus 123 ~c~~~~g~~~c~c~~~~~~~~ 143 (145)
.|.++.|+|+|.|++||.|..
T Consensus 11 ~C~n~~gs~~C~C~~Gy~L~~ 31 (51)
T 1kig_L 11 FCREERSEVRCSCAHGYVLGD 31 (51)
T ss_dssp CCCEETTEECCCCCTTEEECT
T ss_pred EeEcCCCCeEEeCCCCcEECC
Confidence 566777777777777776654
No 85
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.29 E-value=0.0032 Score=30.93 Aligned_cols=32 Identities=25% Similarity=0.888 Sum_probs=25.7
Q ss_pred CCCCCCCCeee--eCCCceEEeCCCCcccCCccc
Q psy6349 51 SDPCQNGATCQ--DLIGGYSCQCARGFQGQNCEL 82 (145)
Q Consensus 51 ~~~c~~~~~c~--~~~~~~~c~c~~g~~g~~c~~ 82 (145)
..||.+++.|. ...+.|.|.|..+|.|..|+.
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~ 44 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY 44 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCc
Confidence 35788888887 456789999999999998864
No 86
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.29 E-value=0.00074 Score=44.90 Aligned_cols=38 Identities=24% Similarity=0.713 Sum_probs=29.5
Q ss_pred ecCCCCCCCCCCC-CCEeeeCCCceeeecCCCcc--cCCCC
Q psy6349 6 VSSPGLKREALCH-NGTCEDFGNSHRCHCMEGYT--GSYCS 43 (145)
Q Consensus 6 ~~~~~~~~~~~c~-~~~c~~~~~~~~C~c~~g~~--~~~c~ 43 (145)
++++|....+.|. ++.|.+..|+|.|.|.+||. |..|.
T Consensus 4 DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~ 44 (285)
T 1gl4_A 4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCV 44 (285)
T ss_dssp ---CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEE
T ss_pred cchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC
Confidence 3566666678896 57999999999999999998 66674
No 87
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=96.29 E-value=0.004 Score=32.39 Aligned_cols=42 Identities=26% Similarity=0.588 Sum_probs=27.6
Q ss_pred ecCCCCCCCCCCCCCEeeeCCC-ceeeecCCCcc----cCCCCccCCCC
Q psy6349 6 VSSPGLKREALCHNGTCEDFGN-SHRCHCMEGYT----GSYCSIEINEC 49 (145)
Q Consensus 6 ~~~~~~~~~~~c~~~~c~~~~~-~~~C~c~~g~~----~~~c~~~~~~c 49 (145)
++++|......|. ..|++..+ +|.|.|..||. +..|. ++++|
T Consensus 4 d~~eC~~~nggC~-h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~-d~dec 50 (69)
T 1kli_L 4 DQLICVNENGGCE-QYCSDHTGTKRSCRCHEGYSLLADGVSCT-PTVEY 50 (69)
T ss_dssp CCCCTTSGGGGCS-SEEEEETTTEEEEECCTTEEECTTSSCEE-ECSSS
T ss_pred ccccccCCCCCcC-CEeEcCCCCCEEEeCCCCCeECCCCCccc-Ccccc
Confidence 4555654444564 37888887 78999999986 45563 45544
No 88
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.25 E-value=0.0068 Score=31.69 Aligned_cols=33 Identities=12% Similarity=0.120 Sum_probs=26.0
Q ss_pred ecCCCCCCCCCCCC-CEeeeCCCceeee-cCCCcc
Q psy6349 6 VSSPGLKREALCHN-GTCEDFGNSHRCH-CMEGYT 38 (145)
Q Consensus 6 ~~~~~~~~~~~c~~-~~c~~~~~~~~C~-c~~g~~ 38 (145)
++++|....+.|.+ +.|+++.++|+|. +..||.
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~ 36 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVI 36 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCC
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCccc
Confidence 46778777788964 6899999999997 455665
No 89
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.19 E-value=0.0026 Score=38.67 Aligned_cols=42 Identities=36% Similarity=0.888 Sum_probs=31.9
Q ss_pred CCCCCCCCCCCCeeeeCCCceEEeCCCCcccCCccccCCCCcC
Q psy6349 47 NECESDPCQNGATCQDLIGGYSCQCARGFQGQNCELNVDDCKP 89 (145)
Q Consensus 47 ~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~~~~~~c~~ 89 (145)
..|...||..++.|.+..+.|.|.|.+||.|..|. .+++|.+
T Consensus 120 ~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce-~~~~c~~ 161 (162)
T 1g1s_A 120 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECE-YVRDDDD 161 (162)
T ss_dssp CCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSC-EECC---
T ss_pred CCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccc-cCcccCC
Confidence 45666778778899998889999999999999997 4456653
No 90
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=96.11 E-value=0.0032 Score=30.67 Aligned_cols=33 Identities=24% Similarity=0.668 Sum_probs=22.7
Q ss_pred CCCCCCEeeeCCCceeeecCCCcc----cCCCCccCCCC
Q psy6349 15 ALCHNGTCEDFGNSHRCHCMEGYT----GSYCSIEINEC 49 (145)
Q Consensus 15 ~~c~~~~c~~~~~~~~C~c~~g~~----~~~c~~~~~~c 49 (145)
..|.+ .|++..++|.|.|..||. +..|. +++++
T Consensus 6 g~C~~-~C~n~~gs~~C~C~~Gy~L~~d~~tC~-dide~ 42 (51)
T 1kig_L 6 GGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCV-STERF 42 (51)
T ss_dssp TSSSS-CCCEETTEECCCCCTTEEECTTSSCEE-ECSSS
T ss_pred CCcCC-EeEcCCCCeEEeCCCCcEECCCCCccc-cCCcc
Confidence 34543 688888889999999986 45553 45543
No 91
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=96.11 E-value=0.0031 Score=31.75 Aligned_cols=20 Identities=25% Similarity=0.431 Sum_probs=10.7
Q ss_pred eeeeCC-CceeEecCCCCCcC
Q psy6349 123 TCEDFG-NSHRCHCICWDDLR 142 (145)
Q Consensus 123 ~c~~~~-g~~~c~c~~~~~~~ 142 (145)
.|.++. |+|+|.|++||.|.
T Consensus 12 ~C~n~~~gs~~C~C~~Gy~L~ 32 (59)
T 2wph_E 12 FCKNSADNKVVCSCTEGYRLA 32 (59)
T ss_dssp EEEECSTTCEEEECCTTEEEC
T ss_pred EeEeCCCCCEEeeCCCCcEEC
Confidence 455554 35555555555554
No 92
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.03 E-value=0.004 Score=31.22 Aligned_cols=28 Identities=29% Similarity=0.661 Sum_probs=21.9
Q ss_pred CCCC-CEeee----CCCceeeecCCCcccCCCC
Q psy6349 16 LCHN-GTCED----FGNSHRCHCMEGYTGSYCS 43 (145)
Q Consensus 16 ~c~~-~~c~~----~~~~~~C~c~~g~~~~~c~ 43 (145)
+|.| |.|.. ....|.|.|.+||.|.+|+
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce 47 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCc
Confidence 6876 68973 3346789999999999996
No 93
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.00 E-value=0.012 Score=34.22 Aligned_cols=56 Identities=25% Similarity=0.514 Sum_probs=34.9
Q ss_pred CCCC-CEeeeCC--Cce-eeecCCCcccCCCCccCC-CCCCCCCCCCCeeeeCCCceEEeCCCCcccCCcc
Q psy6349 16 LCHN-GTCEDFG--NSH-RCHCMEGYTGSYCSIEIN-ECESDPCQNGATCQDLIGGYSCQCARGFQGQNCE 81 (145)
Q Consensus 16 ~c~~-~~c~~~~--~~~-~C~c~~g~~~~~c~~~~~-~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~ 81 (145)
+|.| +.|++.. ..+ .|.|..+|.|..|++++. .|... ....|.+.+...+.|..|+
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~~C~~g----------~G~~YrG~~~~t~sG~~Cq 62 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEG----------NGHFYRGKASTDTMGRPCL 62 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESSCCSBCS----------SCTTCCSCCCBBTTSCBBC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCcCCCccc----------ccccceeeccccccCCccc
Confidence 5776 6998874 344 899999999999975443 23211 1223455555555565554
No 94
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=95.97 E-value=0.0029 Score=31.07 Aligned_cols=21 Identities=24% Similarity=0.442 Sum_probs=12.0
Q ss_pred eeeeCCC-ceeEecCCCCCcCC
Q psy6349 123 TCEDFGN-SHRCHCICWDDLRN 143 (145)
Q Consensus 123 ~c~~~~g-~~~c~c~~~~~~~~ 143 (145)
.|.++.| +|+|.|++||.|..
T Consensus 12 ~C~n~~ggs~~C~C~~Gy~L~~ 33 (53)
T 2bz6_L 12 YCSDHTGTKRSCRCHEGYSLLA 33 (53)
T ss_dssp EEEEETTTEEEEECCTTEEECT
T ss_pred EeEcCCCCCEEeeCCCCCEECC
Confidence 4555555 46666666665543
No 95
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=95.82 E-value=0.013 Score=35.81 Aligned_cols=28 Identities=29% Similarity=0.738 Sum_probs=21.1
Q ss_pred CCC-CCEeeeCC--Cceee-ecCCCcccCCCC
Q psy6349 16 LCH-NGTCEDFG--NSHRC-HCMEGYTGSYCS 43 (145)
Q Consensus 16 ~c~-~~~c~~~~--~~~~C-~c~~g~~~~~c~ 43 (145)
+|. ++.|.... +.+.| .|.++|.|..|+
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce 33 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE 33 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSC
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCc
Confidence 355 36887654 56789 799999999886
No 96
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=95.76 E-value=0.0067 Score=44.00 Aligned_cols=15 Identities=40% Similarity=0.871 Sum_probs=11.1
Q ss_pred eEEeCCCCcccCCcc
Q psy6349 67 YSCQCARGFQGQNCE 81 (145)
Q Consensus 67 ~~c~c~~g~~g~~c~ 81 (145)
+.|.|..+|.|..|.
T Consensus 460 g~C~C~~g~~G~~Ce 474 (525)
T 4aqs_A 460 GYCYCKRLVTGQRCD 474 (525)
T ss_dssp CCBCBCTTCCSTTTC
T ss_pred CEEECCCCCcCCCcc
Confidence 457888888887774
No 97
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=95.75 E-value=0.0071 Score=38.81 Aligned_cols=60 Identities=30% Similarity=0.805 Sum_probs=44.5
Q ss_pred CCCCC-CCEeeeCCCceeeecCCC------cccCCCCccCCCCCCC---CCCCC--CeeeeCCCceEEeCCCCcccCCcc
Q psy6349 14 EALCH-NGTCEDFGNSHRCHCMEG------YTGSYCSIEINECESD---PCQNG--ATCQDLIGGYSCQCARGFQGQNCE 81 (145)
Q Consensus 14 ~~~c~-~~~c~~~~~~~~C~c~~g------~~~~~c~~~~~~c~~~---~c~~~--~~c~~~~~~~~c~c~~g~~g~~c~ 81 (145)
..+|. +|.|.. ..|.|.++ |.|..|+.+...|... +|..+ +.|.. ..|.|.++|.|..|.
T Consensus 142 ~~~Csg~G~C~~----g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~~G~~C~ 213 (217)
T 2p28_B 142 SIICSGLGDCVC----GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGSACQ 213 (217)
T ss_dssp SCBGGGTEEEET----TEEEECCCCSTTCCEESTTSCEESSCSCEETTEETTCTTTEEEET----TEEEECTTEESTTSC
T ss_pred CCCCCCCCEEeC----CceECCCCCCCcccEECCCcccCCccCCCCCCCCCCCCCCcEEeC----CeeECCCCCccCCcC
Confidence 35675 578874 26999999 5899997555667543 57766 78873 279999999999885
No 98
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=95.75 E-value=0.012 Score=28.53 Aligned_cols=29 Identities=28% Similarity=0.866 Sum_probs=22.5
Q ss_pred CCCCCCEee--eCCCceeeecCCCcccCCCC
Q psy6349 15 ALCHNGTCE--DFGNSHRCHCMEGYTGSYCS 43 (145)
Q Consensus 15 ~~c~~~~c~--~~~~~~~C~c~~g~~~~~c~ 43 (145)
..|.||.|. ...+.+.|.|..+|.|.+|+
T Consensus 18 ~yC~nG~C~~i~~~~~~~C~C~~gy~G~RCe 48 (50)
T 2rnl_A 18 NFCIHGECKYIEHLEAVTCKCQQEYFGERCG 48 (50)
T ss_dssp GTCSSSEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred CcCCCCEEEEecCCCCeeEECCCCccccccc
Confidence 567788887 33456789999999999885
No 99
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=95.74 E-value=0.0083 Score=29.05 Aligned_cols=29 Identities=34% Similarity=0.867 Sum_probs=22.0
Q ss_pred CCCCCCEee--eCCCceeeecCCCcccCCCC
Q psy6349 15 ALCHNGTCE--DFGNSHRCHCMEGYTGSYCS 43 (145)
Q Consensus 15 ~~c~~~~c~--~~~~~~~C~c~~g~~~~~c~ 43 (145)
..|.||.|. ...+.+.|.|..+|+|.+|+
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 1iox_A 14 HYCIKGRCRFVVAEQTPSCVCDEGYIGARCE 44 (50)
T ss_dssp TSCTTCCEEEETTTTEEEECCCTTEETTTTC
T ss_pred CcccCCEEEeEcCCCCeEEECCCCcccCCCC
Confidence 567778885 33456789999999999986
No 100
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=95.68 E-value=0.01 Score=29.08 Aligned_cols=32 Identities=34% Similarity=0.823 Sum_probs=22.0
Q ss_pred CCCCCEeeeCCC-ceeeecCCCcc----cCCCCccCCCC
Q psy6349 16 LCHNGTCEDFGN-SHRCHCMEGYT----GSYCSIEINEC 49 (145)
Q Consensus 16 ~c~~~~c~~~~~-~~~C~c~~g~~----~~~c~~~~~~c 49 (145)
.|. ..|++..+ +|.|.|..||. +..|. ++++|
T Consensus 8 gC~-~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~-d~dec 44 (53)
T 2bz6_L 8 GCE-QYCSDHTGTKRSCRCHEGYSLLADGVSCT-PTVEY 44 (53)
T ss_dssp GCS-SEEEEETTTEEEEECCTTEEECTTSSCEE-ECSSS
T ss_pred CcC-CEeEcCCCCCEEeeCCCCCEECCCCCccc-CCccc
Confidence 454 36888887 68899999886 45563 55554
No 101
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=95.60 E-value=0.016 Score=28.04 Aligned_cols=30 Identities=33% Similarity=0.938 Sum_probs=22.7
Q ss_pred CCCCCCCEeeeC--CCceeeecCCCcccCCCC
Q psy6349 14 EALCHNGTCEDF--GNSHRCHCMEGYTGSYCS 43 (145)
Q Consensus 14 ~~~c~~~~c~~~--~~~~~C~c~~g~~~~~c~ 43 (145)
...|.||.|... ...+.|.|..||+|.+|+
T Consensus 13 ~~yC~nG~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 3e50_C 13 TQFCFHGTCRFLVQEDKPACVCHSGYVGARCE 44 (50)
T ss_pred cCcccCCEEeeccCCCCeEEECCCCCcccCCC
Confidence 456777888742 356789999999999885
No 102
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=95.59 E-value=0.0068 Score=40.36 Aligned_cols=34 Identities=21% Similarity=0.598 Sum_probs=21.3
Q ss_pred cCCCCc--CCCCCCCCEEeeCCCCeEeeCCCCCccC
Q psy6349 83 NVDDCK--PNPCQNGGICHDLINHFSCSCPSGLKRE 116 (145)
Q Consensus 83 ~~~~c~--~~~~~~~~~c~~~~~~~~C~c~~g~~~~ 116 (145)
++++|. .+.|..++.|+++.++|.|.|.+||.+.
T Consensus 4 DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~Gn 39 (285)
T 1gl4_A 4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGN 39 (285)
T ss_dssp ---CHHHHGGGSCTTEEEEECSSCEEEEECTTEEEC
T ss_pred cchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCC
Confidence 345553 3456666777777777777777777754
No 103
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.58 E-value=0.006 Score=37.04 Aligned_cols=34 Identities=29% Similarity=0.845 Sum_probs=27.9
Q ss_pred CCcCCCCCCCCEEeeCCCCeEeeCCCCCccCCCCC
Q psy6349 86 DCKPNPCQNGGICHDLINHFSCSCPSGLKREALCH 120 (145)
Q Consensus 86 ~c~~~~~~~~~~c~~~~~~~~C~c~~g~~~~~~C~ 120 (145)
+|...+|..++.|.+..+.|.|.|++||.+. .|.
T Consensus 121 ~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~-~Ce 154 (162)
T 1g1s_A 121 SCQDMSCSKQGECLETIGNYTCSCYPGFYGP-ECE 154 (162)
T ss_dssp CCCTTGGGGSEEEEECSSSEEEEECTTEEST-TSC
T ss_pred CCcCCCCCCCCEEecCCCCceEeCCCCCcCc-ccc
Confidence 3445567778899999999999999999985 576
No 104
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=95.43 E-value=0.018 Score=30.09 Aligned_cols=27 Identities=33% Similarity=0.904 Sum_probs=16.3
Q ss_pred cCCCCCC--CCCCCCCeeeeCCCceEEeC
Q psy6349 45 EINECES--DPCQNGATCQDLIGGYSCQC 71 (145)
Q Consensus 45 ~~~~c~~--~~c~~~~~c~~~~~~~~c~c 71 (145)
++++|.. .+|...+.|++..++|.|.+
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~ 30 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLP 30 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEE
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecc
Confidence 4566654 34555556777777777753
No 105
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=95.32 E-value=0.011 Score=30.73 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=22.8
Q ss_pred cCCCCcCCCCCCCCEEeeCCC-CeEeeCCCCCccC
Q psy6349 83 NVDDCKPNPCQNGGICHDLIN-HFSCSCPSGLKRE 116 (145)
Q Consensus 83 ~~~~c~~~~~~~~~~c~~~~~-~~~C~c~~g~~~~ 116 (145)
++++|..........|+++.+ +|.|.|++||.+.
T Consensus 4 d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~ 38 (69)
T 1kli_L 4 DQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLL 38 (69)
T ss_dssp CCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEEC
T ss_pred ccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeEC
Confidence 345565433334567888877 7889999998764
No 106
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=95.29 E-value=0.043 Score=30.44 Aligned_cols=69 Identities=20% Similarity=0.594 Sum_probs=42.8
Q ss_pred CCCCCCCCCCCCeeee-CCCceEEeCCCCcc--cCCccccC-CCCcC--CCCCCCCEEeeCC-----CCeEeeCCCCCcc
Q psy6349 47 NECESDPCQNGATCQD-LIGGYSCQCARGFQ--GQNCELNV-DDCKP--NPCQNGGICHDLI-----NHFSCSCPSGLKR 115 (145)
Q Consensus 47 ~~c~~~~c~~~~~c~~-~~~~~~c~c~~g~~--g~~c~~~~-~~c~~--~~~~~~~~c~~~~-----~~~~C~c~~g~~~ 115 (145)
..|....|...+.|.+ ..+...|+|.++|. |..|.... ..|.. ..|...++|.... +...|.|.++|..
T Consensus 5 h~C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~~ 84 (99)
T 1ob1_C 5 HQCVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSY 84 (99)
T ss_dssp TCCCSCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTCC
T ss_pred eEeccCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCcc
Confidence 3576677888888876 46778899999997 44454222 34542 2355566665543 3456666666544
No 107
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=95.14 E-value=0.011 Score=31.53 Aligned_cols=30 Identities=30% Similarity=0.789 Sum_probs=20.9
Q ss_pred CCCCCCCEeee--CCCceeeecCCCcccCCCC
Q psy6349 14 EALCHNGTCED--FGNSHRCHCMEGYTGSYCS 43 (145)
Q Consensus 14 ~~~c~~~~c~~--~~~~~~C~c~~g~~~~~c~ 43 (145)
...|.||.|+. ..+.+.|.|.++|+|.+|+
T Consensus 45 ~~yClnG~C~~i~~~~~~~C~C~~GYtG~RCE 76 (79)
T 1xdt_R 45 KDFCIHGECKYVKELRAPSCICHPGYHGERCH 76 (79)
T ss_dssp TTCCSSEEECCBGGGTBCCEEECTTEESTTCC
T ss_pred cCcCCCCEeeeecCCCCeEEEcCCCccccccc
Confidence 35677778842 2345678888888888885
No 108
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=95.12 E-value=0.018 Score=42.13 Aligned_cols=35 Identities=37% Similarity=0.971 Sum_probs=19.1
Q ss_pred CCCCCCCCCCCCeeee-CCCceEEeCC-CCcccCCcc
Q psy6349 47 NECESDPCQNGATCQD-LIGGYSCQCA-RGFQGQNCE 81 (145)
Q Consensus 47 ~~c~~~~c~~~~~c~~-~~~~~~c~c~-~g~~g~~c~ 81 (145)
++|.+.||.+++.|.. ..+.|.|.|. .||.|..|+
T Consensus 3 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 39 (553)
T 1q4g_A 3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39 (553)
T ss_dssp CGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred CcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCC
Confidence 3455555555555555 4555555555 555555554
No 109
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=94.98 E-value=0.12 Score=28.85 Aligned_cols=69 Identities=22% Similarity=0.483 Sum_probs=50.9
Q ss_pred CCCCCCCCCCCCeeee-CCCceEEeCCCCcc--cCCccccCCC-CcC--CCCCCCCEEeeCC-CCeEeeCCCCCccC
Q psy6349 47 NECESDPCQNGATCQD-LIGGYSCQCARGFQ--GQNCELNVDD-CKP--NPCQNGGICHDLI-NHFSCSCPSGLKRE 116 (145)
Q Consensus 47 ~~c~~~~c~~~~~c~~-~~~~~~c~c~~g~~--g~~c~~~~~~-c~~--~~~~~~~~c~~~~-~~~~C~c~~g~~~~ 116 (145)
..|....|...+.|.+ ..+...|+|..+|. |..|... +. |.. ..|...++|.... ....|.|.++|...
T Consensus 11 h~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~-Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~ 86 (105)
T 1n1i_A 11 HKCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA-SITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEP 86 (105)
T ss_dssp TSCCSSCCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC-CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCE
T ss_pred cEecCCCCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC-CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCcc
Confidence 5677777888889987 57888999999998 5566544 44 543 3477788888775 56789998887554
No 110
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=94.72 E-value=0.27 Score=27.53 Aligned_cols=59 Identities=22% Similarity=0.536 Sum_probs=41.2
Q ss_pred CCC-CCEeee-CCCceeeecCCCcc--cCCCCccCCC-CCC--CCCCCCCeeeeCC-CceEEeCCCCc
Q psy6349 16 LCH-NGTCED-FGNSHRCHCMEGYT--GSYCSIEINE-CES--DPCQNGATCQDLI-GGYSCQCARGF 75 (145)
Q Consensus 16 ~c~-~~~c~~-~~~~~~C~c~~g~~--~~~c~~~~~~-c~~--~~c~~~~~c~~~~-~~~~c~c~~g~ 75 (145)
.|. |+.|.+ ..|...|.|..+|. |..|. ..+. |.. .-|...+.|.... ....|.|..++
T Consensus 17 ~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv-~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~ 83 (105)
T 1n1i_A 17 NVPENAACYRYLDGTEEWRCLLGFKEVGGKCV-PASITCEENNGGCAPEAECTMDDKKEVECKCTKEG 83 (105)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEEECSSSEE-ECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred CCCCCCCeEECCCCCEeEEEECCeeccCCEEE-ECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCC
Confidence 454 678987 56788999999998 55664 3355 543 3377788888764 66778887764
No 111
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=94.71 E-value=0.029 Score=41.25 Aligned_cols=34 Identities=44% Similarity=1.094 Sum_probs=16.2
Q ss_pred CCCCCCCCCCCeeee-CCCceEEeCC-CCcccCCcc
Q psy6349 48 ECESDPCQNGATCQD-LIGGYSCQCA-RGFQGQNCE 81 (145)
Q Consensus 48 ~c~~~~c~~~~~c~~-~~~~~~c~c~-~g~~g~~c~ 81 (145)
+|.+.||.+++.|.. ..+.|.|.|. .||.|.+|+
T Consensus 3 ~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 38 (587)
T 3nt1_A 3 PCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38 (587)
T ss_dssp TTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred CCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCC
Confidence 344445555555542 2244555555 555554443
No 112
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=94.29 E-value=0.03 Score=40.99 Aligned_cols=34 Identities=29% Similarity=0.681 Sum_probs=28.7
Q ss_pred CCCCCCC-CEeee-CCCceeeecC-CCcccCCCCccC
Q psy6349 13 REALCHN-GTCED-FGNSHRCHCM-EGYTGSYCSIEI 46 (145)
Q Consensus 13 ~~~~c~~-~~c~~-~~~~~~C~c~-~g~~~~~c~~~~ 46 (145)
...+|.| |.|.+ ..+.|.|.|. .||.|..|+...
T Consensus 6 ~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~~ 42 (553)
T 1q4g_A 6 CYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIPE 42 (553)
T ss_dssp GGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEEC
T ss_pred CCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCCc
Confidence 4578986 79999 7889999999 999999997543
No 113
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=94.16 E-value=0.031 Score=27.88 Aligned_cols=30 Identities=50% Similarity=0.969 Sum_probs=24.0
Q ss_pred CCCCCCeeee----CCCceEEeCCCCcccCCccc
Q psy6349 53 PCQNGATCQD----LIGGYSCQCARGFQGQNCEL 82 (145)
Q Consensus 53 ~c~~~~~c~~----~~~~~~c~c~~g~~g~~c~~ 82 (145)
+|.+++.|.. ....+.|.|..||.|..|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence 6888888873 34568899999999999863
No 114
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=93.89 E-value=0.21 Score=27.69 Aligned_cols=59 Identities=24% Similarity=0.684 Sum_probs=33.6
Q ss_pred CCC-CCEeeeC-CCceeeecCCCcc--cCCCCccC-CCCCC--CCCCCCCeeeeCC-----CceEEeCCCC
Q psy6349 16 LCH-NGTCEDF-GNSHRCHCMEGYT--GSYCSIEI-NECES--DPCQNGATCQDLI-----GGYSCQCARG 74 (145)
Q Consensus 16 ~c~-~~~c~~~-~~~~~C~c~~g~~--~~~c~~~~-~~c~~--~~c~~~~~c~~~~-----~~~~c~c~~g 74 (145)
.|. |+.|.+. .+...|+|.++|. +..|.... ..|.. .-|...+.|.... +...|.|..+
T Consensus 11 ~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g 81 (99)
T 1ob1_C 11 QCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKP 81 (99)
T ss_dssp CCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECST
T ss_pred CCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCC
Confidence 443 5778764 5677888988887 44554221 34543 2366666666543 3345555444
No 115
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=93.58 E-value=0.079 Score=32.06 Aligned_cols=39 Identities=28% Similarity=0.818 Sum_probs=28.7
Q ss_pred CCCCCCCCCCeeeeCCCceEEeCCCCcccCCccccCCCCc
Q psy6349 49 CESDPCQNGATCQDLIGGYSCQCARGFQGQNCELNVDDCK 88 (145)
Q Consensus 49 c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~~~~~~c~ 88 (145)
|...+|..++.|......+.|.|..||.|..|. .+.+|.
T Consensus 122 ~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~-~~~~c~ 160 (164)
T 3cfw_A 122 CQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQ-FVQVDP 160 (164)
T ss_dssp CCTTSSCSSEEEEEETTEEEEEECTTCBSSSSC-BC----
T ss_pred CCCCcCCCCCeecccCCCceeeeCCCccccccc-ccccCc
Confidence 445677778899888888999999999999886 555664
No 116
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=93.02 E-value=0.087 Score=38.82 Aligned_cols=32 Identities=28% Similarity=0.742 Sum_probs=26.8
Q ss_pred CCCCCCC-CEeee-CCCceeeecC-CCcccCCCCc
Q psy6349 13 REALCHN-GTCED-FGNSHRCHCM-EGYTGSYCSI 44 (145)
Q Consensus 13 ~~~~c~~-~~c~~-~~~~~~C~c~-~g~~~~~c~~ 44 (145)
...+|.| |.|.+ ..+.|.|.|. .||.|..|+.
T Consensus 5 ~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 5 CSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp TTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 5678986 79995 4578999999 9999999974
No 117
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=92.64 E-value=0.11 Score=25.97 Aligned_cols=22 Identities=27% Similarity=0.708 Sum_probs=18.1
Q ss_pred CCEEeeCC-CCeEeeCCCCCccC
Q psy6349 95 GGICHDLI-NHFSCSCPSGLKRE 116 (145)
Q Consensus 95 ~~~c~~~~-~~~~C~c~~g~~~~ 116 (145)
.+.|+++. ++|.|.|++||.+.
T Consensus 10 ~~~C~n~~~gs~~C~C~~Gy~L~ 32 (59)
T 2wph_E 10 EQFCKNSADNKVVCSCTEGYRLA 32 (59)
T ss_dssp SSEEEECSTTCEEEECCTTEEEC
T ss_pred CCEeEeCCCCCEEeeCCCCcEEC
Confidence 45788888 59999999999864
No 118
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=91.92 E-value=0.077 Score=32.41 Aligned_cols=24 Identities=21% Similarity=0.520 Sum_probs=17.5
Q ss_pred CCCCeeeeCCCceeEecCCCCCcCC
Q psy6349 119 CHNGTCEDFGNSHRCHCICWDDLRN 143 (145)
Q Consensus 119 C~~~~c~~~~g~~~c~c~~~~~~~~ 143 (145)
|.+ .|.+..|+|+|.|++||.|..
T Consensus 137 C~~-~C~n~~g~~~C~C~~Gy~l~~ 160 (170)
T 1szb_A 137 CDH-HCHNHLGGFYCSCRAGYVLHR 160 (170)
T ss_dssp SSS-EEEEETTEEEEECCTTEEECT
T ss_pred cCC-ccccCCCCEEEeCCCCcEECC
Confidence 543 688888888888888887654
No 119
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=91.23 E-value=0.5 Score=27.26 Aligned_cols=36 Identities=36% Similarity=0.881 Sum_probs=26.7
Q ss_pred CCCCCCeeeeCC--Cce-EEeCCCCcccCCccccCC-CCc
Q psy6349 53 PCQNGATCQDLI--GGY-SCQCARGFQGQNCELNVD-DCK 88 (145)
Q Consensus 53 ~c~~~~~c~~~~--~~~-~c~c~~g~~g~~c~~~~~-~c~ 88 (145)
||.+++.|+... ..+ .|.|..+|.|..|..++. +|.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~~C~ 41 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCY 41 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESSCCSB
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCcCCCc
Confidence 577888897663 444 899999999999976543 443
No 120
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=90.78 E-value=0.22 Score=30.07 Aligned_cols=40 Identities=28% Similarity=0.781 Sum_probs=27.7
Q ss_pred CcCCCCCCCCEEeeCCCCeEeeCCCCCccCCCCC-CCeeeeC
Q psy6349 87 CKPNPCQNGGICHDLINHFSCSCPSGLKREALCH-NGTCEDF 127 (145)
Q Consensus 87 c~~~~~~~~~~c~~~~~~~~C~c~~g~~~~~~C~-~~~c~~~ 127 (145)
+.+..|...+.|.+....|.|.|.+||.+. .|. ...|.+.
T Consensus 122 ~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~-~C~~~~~c~~~ 162 (164)
T 3cfw_A 122 CQPWSCSGHGECVEIINNYTCNCDVGYYGP-QCQFVQVDPRL 162 (164)
T ss_dssp CCTTSSCSSEEEEEETTEEEEEECTTCBSS-SSCBC------
T ss_pred CCCCcCCCCCeecccCCCceeeeCCCcccc-cccccccCccc
Confidence 334567888999998889999999999996 576 4466543
No 121
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=90.43 E-value=0.088 Score=38.21 Aligned_cols=15 Identities=33% Similarity=0.680 Sum_probs=10.8
Q ss_pred eeeecCCCcccCCCC
Q psy6349 29 HRCHCMEGYTGSYCS 43 (145)
Q Consensus 29 ~~C~c~~g~~~~~c~ 43 (145)
+.|.|.++|.|..|+
T Consensus 460 g~C~C~~g~~G~~Ce 474 (525)
T 4aqs_A 460 GYCYCKRLVTGQRCD 474 (525)
T ss_dssp CCBCBCTTCCSTTTC
T ss_pred CEEECCCCCcCCCcc
Confidence 457788888777773
No 122
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=89.67 E-value=0.44 Score=28.97 Aligned_cols=18 Identities=33% Similarity=1.185 Sum_probs=15.2
Q ss_pred eeeeCCCceEEeCCCCcc
Q psy6349 59 TCQDLIGGYSCQCARGFQ 76 (145)
Q Consensus 59 ~c~~~~~~~~c~c~~g~~ 76 (145)
.|.+..++|.|.|.+||.
T Consensus 140 ~C~n~~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 140 HCHNHLGGFYCSCRAGYV 157 (170)
T ss_dssp EEEEETTEEEEECCTTEE
T ss_pred ccccCCCCEEEeCCCCcE
Confidence 688888888899988886
No 123
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=89.48 E-value=0.55 Score=32.84 Aligned_cols=37 Identities=32% Similarity=0.866 Sum_probs=29.1
Q ss_pred CCCCCCCCCCCCCeeeeCCCceEEeCCC-CcccCCccc
Q psy6349 46 INECESDPCQNGATCQDLIGGYSCQCAR-GFQGQNCEL 82 (145)
Q Consensus 46 ~~~c~~~~c~~~~~c~~~~~~~~c~c~~-g~~g~~c~~ 82 (145)
.+.|...||.+++.|......|.|.|.. +|.|+.|..
T Consensus 185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~ 222 (410)
T 3asi_A 185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCND 222 (410)
T ss_dssp SSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCE
T ss_pred CCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCC
Confidence 3567778888888898888888899985 888877753
No 124
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=88.78 E-value=0.19 Score=30.00 Aligned_cols=28 Identities=29% Similarity=0.819 Sum_probs=20.5
Q ss_pred CCCCCCCCEEeeCCCCeEeeCCCCCccC
Q psy6349 89 PNPCQNGGICHDLINHFSCSCPSGLKRE 116 (145)
Q Consensus 89 ~~~~~~~~~c~~~~~~~~C~c~~g~~~~ 116 (145)
..+|...+.|.+....|.|.|.++|.+.
T Consensus 124 ~~pc~~~g~C~~~~~~~~c~C~~g~~g~ 151 (157)
T 1g1t_A 124 NTSCSGHGECVETINNYTCKCDPGFSGL 151 (157)
T ss_dssp TTGGGGSEEEEEETTEEEEEECTTEEST
T ss_pred CCCCCCCCEeecCCCCeeEECCCCccCc
Confidence 3445666778777778888888888775
No 125
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=88.66 E-value=0.23 Score=29.82 Aligned_cols=23 Identities=22% Similarity=0.316 Sum_probs=18.8
Q ss_pred CeeeeCCCceeEecCCCCCcCCC
Q psy6349 122 GTCEDFGNSHRCHCICWDDLRNS 144 (145)
Q Consensus 122 ~~c~~~~g~~~c~c~~~~~~~~~ 144 (145)
..|.+..++++|.|++||.|..+
T Consensus 130 ~~C~n~~g~~~C~C~~Gy~l~~~ 152 (159)
T 1nzi_A 130 HFCNNFIGGYFCSCPPEYFLHDD 152 (159)
T ss_dssp SEEEEETTEEEEECCTTCEECTT
T ss_pred CcccCcCCCEEEecCCCcEECCC
Confidence 47888889999999999987643
No 126
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=87.29 E-value=0.57 Score=33.16 Aligned_cols=24 Identities=21% Similarity=0.620 Sum_probs=19.1
Q ss_pred CeeeeCCCceEEeCCCCcccCCcc
Q psy6349 58 ATCQDLIGGYSCQCARGFQGQNCE 81 (145)
Q Consensus 58 ~~c~~~~~~~~c~c~~g~~g~~c~ 81 (145)
..|....+.+.|.|..++.|+.|.
T Consensus 304 s~C~~~~g~~~C~C~~~ttG~~CE 327 (426)
T 3zyj_B 304 TVCVYDNSKLTCECEHNTTGPDCG 327 (426)
T ss_dssp SCEEEETTEEEECCCTTEESSSSC
T ss_pred hhcCCCCCCceeeCCCCCcCCCcc
Confidence 357666677899999999999886
No 127
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=86.12 E-value=0.91 Score=27.08 Aligned_cols=31 Identities=32% Similarity=0.744 Sum_probs=23.5
Q ss_pred CCCC-CEeeeCC--Cce-eeecCCCcccCCCCccC
Q psy6349 16 LCHN-GTCEDFG--NSH-RCHCMEGYTGSYCSIEI 46 (145)
Q Consensus 16 ~c~~-~~c~~~~--~~~-~C~c~~g~~~~~c~~~~ 46 (145)
+|.| +.|+... ..+ .|.|..+|.|..|+++.
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~ 48 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDK 48 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEES
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceeccc
Confidence 6776 7998752 344 79999999999997544
No 128
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=85.42 E-value=0.89 Score=28.36 Aligned_cols=26 Identities=42% Similarity=1.163 Sum_probs=16.5
Q ss_pred CCCCCCeeeeCCCceEEeCCCCcccCCcc
Q psy6349 53 PCQNGATCQDLIGGYSCQCARGFQGQNCE 81 (145)
Q Consensus 53 ~c~~~~~c~~~~~~~~c~c~~g~~g~~c~ 81 (145)
+|.+++.|.... .|.|..||.|..|+
T Consensus 154 ~C~ngG~Cv~P~---~C~C~~Gw~G~~C~ 179 (188)
T 2ygo_A 154 GCRNGGFCNERR---ICECPDGFHGPHCE 179 (188)
T ss_dssp CCCTTCEECTTS---CEECCTTCBTTTTC
T ss_pred CCCCCCEeCCCC---cccCcCCCCCCCCc
Confidence 456666666443 36777777777775
No 129
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=85.19 E-value=1 Score=31.43 Aligned_cols=32 Identities=28% Similarity=0.764 Sum_probs=26.8
Q ss_pred CCCCCCCC-CEeeeCCCceeeecCC-CcccCCCC
Q psy6349 12 KREALCHN-GTCEDFGNSHRCHCME-GYTGSYCS 43 (145)
Q Consensus 12 ~~~~~c~~-~~c~~~~~~~~C~c~~-g~~~~~c~ 43 (145)
|...+|.| +.|.+....|.|.|.. +|.|..|+
T Consensus 188 C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~ 221 (410)
T 3asi_A 188 CQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 221 (410)
T ss_dssp CCTTSSSTTCEEEECSSSEEEECTTTSEESTTSC
T ss_pred cccccCCCCCEecCCCCCceEeccCCcccCCCCC
Confidence 45578875 7999888889999996 99999996
No 130
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=83.22 E-value=1.4 Score=35.64 Aligned_cols=36 Identities=33% Similarity=0.921 Sum_probs=28.8
Q ss_pred CCCCCCCCCCCCeeeeCCCceEEeCC-CCcccCCccc
Q psy6349 47 NECESDPCQNGATCQDLIGGYSCQCA-RGFQGQNCEL 82 (145)
Q Consensus 47 ~~c~~~~c~~~~~c~~~~~~~~c~c~-~g~~g~~c~~ 82 (145)
+.|...||.+++.|......+.|.|. ++|.|+.|..
T Consensus 1018 ~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~ 1054 (1245)
T 3qcw_A 1018 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCND 1054 (1245)
T ss_dssp CCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCB
T ss_pred CceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccC
Confidence 56777888888888877778889998 5888888764
No 131
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=83.11 E-value=0.51 Score=32.21 Aligned_cols=18 Identities=28% Similarity=0.722 Sum_probs=7.8
Q ss_pred EEeeCCCCeEeeCCCCCc
Q psy6349 97 ICHDLINHFSCSCPSGLK 114 (145)
Q Consensus 97 ~c~~~~~~~~C~c~~g~~ 114 (145)
.|.++.++|.|.|.+||.
T Consensus 13 ~C~n~~g~~~C~C~~g~~ 30 (349)
T 3v64_C 13 GCTNSEGAFQCWCEAGYE 30 (349)
T ss_dssp EECCC---CCEECCTTEE
T ss_pred eeecCCCCeEEECCCCcc
Confidence 455555555555555554
No 132
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=79.87 E-value=0.8 Score=31.22 Aligned_cols=28 Identities=25% Similarity=0.704 Sum_probs=16.3
Q ss_pred CCCCCCCCCCCCEeeeCCCceeeecCCCcc
Q psy6349 9 PGLKREALCHNGTCEDFGNSHRCHCMEGYT 38 (145)
Q Consensus 9 ~~~~~~~~c~~~~c~~~~~~~~C~c~~g~~ 38 (145)
+|. ....|.+ .|.+..++|.|.|..||.
T Consensus 3 ec~-~~~~C~~-~C~n~~g~~~C~C~~g~~ 30 (349)
T 3v64_C 3 ECA-EEGYCSQ-GCTNSEGAFQCWCEAGYE 30 (349)
T ss_dssp -------CCSS-EECCC---CCEECCTTEE
T ss_pred ccC-CCCCCcC-eeecCCCCeEEECCCCcc
Confidence 444 3356754 899999999999999996
No 133
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=79.84 E-value=0.69 Score=27.53 Aligned_cols=26 Identities=23% Similarity=0.354 Sum_probs=22.2
Q ss_pred CCCC-CCeeeeCCCceeEecCCCCCcC
Q psy6349 117 ALCH-NGTCEDFGNSHRCHCICWDDLR 142 (145)
Q Consensus 117 ~~C~-~~~c~~~~g~~~c~c~~~~~~~ 142 (145)
.+|. ++.|.+..+.|.|.|.+||+++
T Consensus 125 ~pc~~~g~C~~~~~~~~c~C~~g~~g~ 151 (157)
T 1g1t_A 125 TSCSGHGECVETINNYTCKCDPGFSGL 151 (157)
T ss_dssp TGGGGSEEEEEETTEEEEEECTTEEST
T ss_pred CCCCCCCEeecCCCCeeEECCCCccCc
Confidence 3566 6899999999999999999875
No 134
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=79.75 E-value=1.3 Score=29.25 Aligned_cols=30 Identities=23% Similarity=0.486 Sum_probs=22.1
Q ss_pred CCCCCC-CCCCCCCEeeeCCCceeeecCCCcc
Q psy6349 8 SPGLKR-EALCHNGTCEDFGNSHRCHCMEGYT 38 (145)
Q Consensus 8 ~~~~~~-~~~c~~~~c~~~~~~~~C~c~~g~~ 38 (145)
++|... ...|.+ .|.+..++|+|.|..||.
T Consensus 3 ~eC~~~~~~~C~~-~C~~~~~~~~C~C~~G~~ 33 (283)
T 3f1s_B 3 NECHPERTDGCQH-FCLPGQESYTCSCAQGYR 33 (283)
T ss_dssp CCCCSSCSSSCSS-BCCCCTTSCCCBCCTTEE
T ss_pred CccCCCCCCCCCC-EeeCCCCCeEecCCCCcc
Confidence 445444 456753 788888999999999986
No 135
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=77.89 E-value=1 Score=29.81 Aligned_cols=19 Identities=32% Similarity=0.817 Sum_probs=9.9
Q ss_pred CCeeeeCCCceEEeCCCCc
Q psy6349 57 GATCQDLIGGYSCQCARGF 75 (145)
Q Consensus 57 ~~~c~~~~~~~~c~c~~g~ 75 (145)
...|.+..++|.|.|..||
T Consensus 14 ~~~C~~~~~~~~C~C~~G~ 32 (283)
T 3f1s_B 14 QHFCLPGQESYTCSCAQGY 32 (283)
T ss_dssp SSBCCCCTTSCCCBCCTTE
T ss_pred CCEeeCCCCCeEecCCCCc
Confidence 3445555555555555554
No 136
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=77.08 E-value=2.7 Score=26.23 Aligned_cols=26 Identities=38% Similarity=1.193 Sum_probs=18.4
Q ss_pred CCCCCCEEeeCCCCeEeeCCCCCccCCCCC
Q psy6349 91 PCQNGGICHDLINHFSCSCPSGLKREALCH 120 (145)
Q Consensus 91 ~~~~~~~c~~~~~~~~C~c~~g~~~~~~C~ 120 (145)
.|.++|.|+.- .. |.|++||.|. .|.
T Consensus 154 ~C~ngG~Cv~P--~~-C~C~~Gw~G~-~C~ 179 (188)
T 2ygo_A 154 GCRNGGFCNER--RI-CECPDGFHGP-HCE 179 (188)
T ss_dssp CCCTTCEECTT--SC-EECCTTCBTT-TTC
T ss_pred CCCCCCEeCCC--Cc-ccCcCCCCCC-CCc
Confidence 46778888642 22 8899999985 565
No 137
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=73.68 E-value=4.8 Score=23.93 Aligned_cols=32 Identities=38% Similarity=0.920 Sum_probs=24.7
Q ss_pred CCCCCCeeeeC--CCce-EEeCCCCcccCCccccC
Q psy6349 53 PCQNGATCQDL--IGGY-SCQCARGFQGQNCELNV 84 (145)
Q Consensus 53 ~c~~~~~c~~~--~~~~-~c~c~~g~~g~~c~~~~ 84 (145)
||.+++.|+.. ...+ .|.|..+|.|..|..++
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~ 48 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDK 48 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEES
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceeccc
Confidence 78888899765 2344 79999999999997554
No 138
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=72.64 E-value=3.9 Score=33.09 Aligned_cols=37 Identities=38% Similarity=1.006 Sum_probs=30.8
Q ss_pred CCCCCCCCCCCCCeeeeCCCceEEeCC-CCcccCCccc
Q psy6349 46 INECESDPCQNGATCQDLIGGYSCQCA-RGFQGQNCEL 82 (145)
Q Consensus 46 ~~~c~~~~c~~~~~c~~~~~~~~c~c~-~g~~g~~c~~ 82 (145)
.+.|.+.||.+++.|......|.|.|. .+|.|+.|..
T Consensus 619 ~~~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~G~~C~~ 656 (1245)
T 3qcw_A 619 AKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER 656 (1245)
T ss_dssp SCGGGSCCCCTTCEEEECSSSEEEECTTTTEESTTSCE
T ss_pred CCCCCccCCCCCCEEeCCCCCeEEECCCCCcccccCcc
Confidence 356788899999999988888999998 7898888853
No 139
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=72.44 E-value=6.3 Score=23.35 Aligned_cols=19 Identities=37% Similarity=1.050 Sum_probs=16.2
Q ss_pred CeeeeCCCceEEeCCCCcc
Q psy6349 58 ATCQDLIGGYSCQCARGFQ 76 (145)
Q Consensus 58 ~~c~~~~~~~~c~c~~g~~ 76 (145)
..|.+..+++.|.|..||.
T Consensus 130 ~~C~n~~g~~~C~C~~Gy~ 148 (159)
T 1nzi_A 130 HFCNNFIGGYFCSCPPEYF 148 (159)
T ss_dssp SEEEEETTEEEEECCTTCE
T ss_pred CcccCcCCCEEEecCCCcE
Confidence 4688888889999999987
No 140
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=64.46 E-value=5.4 Score=26.60 Aligned_cols=22 Identities=18% Similarity=0.173 Sum_probs=16.6
Q ss_pred eeeeCC------CceeEecCCCCCcCCC
Q psy6349 123 TCEDFG------NSHRCHCICWDDLRNS 144 (145)
Q Consensus 123 ~c~~~~------g~~~c~c~~~~~~~~~ 144 (145)
.|.... ++|+|.|+.||+|..+
T Consensus 283 ~C~~~p~~~~~~~~~~C~C~~g~~l~~d 310 (316)
T 1ijq_A 283 LCLPAPQINPHSPKFTCACPDGMLLARD 310 (316)
T ss_dssp EEEECCCCSTTCCSEEEECCTTCEECTT
T ss_pred ccCCCccccCCCCCeEeeCCCCCEECCC
Confidence 566543 6889999999988654
No 141
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=64.33 E-value=6.6 Score=26.37 Aligned_cols=22 Identities=18% Similarity=0.162 Sum_probs=16.3
Q ss_pred eeeeCCC--ceeEecCCCCCcCCC
Q psy6349 123 TCEDFGN--SHRCHCICWDDLRNS 144 (145)
Q Consensus 123 ~c~~~~g--~~~c~c~~~~~~~~~ 144 (145)
.|....+ +|+|.|+.||.|..+
T Consensus 280 ~C~~~~~~~~~~C~C~~g~~l~~d 303 (318)
T 3sov_A 280 LCLMSPVKPFYQCACPTGVKLLEN 303 (318)
T ss_dssp EEEECSSTTSEEEECSTTCCBCTT
T ss_pred EEecCCCCCCeEEECCCCCEECCC
Confidence 5666544 688999999988654
No 142
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=59.84 E-value=5.3 Score=29.66 Aligned_cols=23 Identities=22% Similarity=0.262 Sum_probs=19.3
Q ss_pred CeeeeCCCceeEecCCCCCcCCC
Q psy6349 122 GTCEDFGNSHRCHCICWDDLRNS 144 (145)
Q Consensus 122 ~~c~~~~g~~~c~c~~~~~~~~~ 144 (145)
..|.+..++++|.|+.||.|..+
T Consensus 590 ~~C~~~~~~~~C~C~~g~~l~~d 612 (619)
T 3s94_A 590 HLCLYRPQGLRCACPIGFELISD 612 (619)
T ss_dssp SEEEEETTEEEEECCTTCEECSS
T ss_pred HhhccCCCCeEEECCCCCEECCC
Confidence 37888889999999999988654
No 143
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=59.58 E-value=5.2 Score=29.80 Aligned_cols=21 Identities=19% Similarity=0.393 Sum_probs=14.4
Q ss_pred eeeeCC-CceeEecCCCCCcCC
Q psy6349 123 TCEDFG-NSHRCHCICWDDLRN 143 (145)
Q Consensus 123 ~c~~~~-g~~~c~c~~~~~~~~ 143 (145)
.|.+.. ++|+|.|+.||.|..
T Consensus 278 ~C~~~~~~~~~C~C~~g~~l~~ 299 (628)
T 4a0p_A 278 LCLAVPVGGFVCGCPAHYSLNA 299 (628)
T ss_dssp EEEEETTTEEEEECSTTCEECT
T ss_pred hhhcCCCCCeeEEcCCCcEecc
Confidence 566666 777777777777643
No 144
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=54.33 E-value=9.1 Score=28.52 Aligned_cols=34 Identities=18% Similarity=0.554 Sum_probs=24.6
Q ss_pred cCCCCcCCCCCCCCEEeeCC-CCeEeeCCCCCccC
Q psy6349 83 NVDDCKPNPCQNGGICHDLI-NHFSCSCPSGLKRE 116 (145)
Q Consensus 83 ~~~~c~~~~~~~~~~c~~~~-~~~~C~c~~g~~~~ 116 (145)
..++|...+..+.+.|.+.. ++|.|.|++||...
T Consensus 264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~ 298 (628)
T 4a0p_A 264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLN 298 (628)
T ss_dssp CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEEC
T ss_pred cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEec
Confidence 34566544334567898887 88999999999763
No 145
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=54.07 E-value=14 Score=27.23 Aligned_cols=32 Identities=25% Similarity=0.510 Sum_probs=23.6
Q ss_pred CCCCCCC-CCCC-CCEeeeCC-CceeeecCCCccc
Q psy6349 8 SPGLKRE-ALCH-NGTCEDFG-NSHRCHCMEGYTG 39 (145)
Q Consensus 8 ~~~~~~~-~~c~-~~~c~~~~-~~~~C~c~~g~~~ 39 (145)
..|..+. ++|. ++.|+... +.|.|.|..||.|
T Consensus 19 ~~c~~~~~~~c~~~a~C~~~~~~~~~c~C~~G~ag 53 (551)
T 3fby_A 19 RFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAG 53 (551)
T ss_dssp CBCTTSSBCCCCTTEEEEECTTSCEEEEECTTEES
T ss_pred ccCCCCCCCCCCCCCeeEeCCCCCEecCCCCCCCC
Confidence 3455543 6896 68898764 6789999999984
No 146
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=53.11 E-value=17 Score=24.32 Aligned_cols=24 Identities=29% Similarity=0.722 Sum_probs=14.6
Q ss_pred CeeeeCCC--ceEEeCCCCcc----cCCcc
Q psy6349 58 ATCQDLIG--GYSCQCARGFQ----GQNCE 81 (145)
Q Consensus 58 ~~c~~~~~--~~~c~c~~g~~----g~~c~ 81 (145)
..|....+ .+.|.|+.+|. ++.|.
T Consensus 279 ~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~ 308 (318)
T 3sov_A 279 HLCLMSPVKPFYQCACPTGVKLLENGKTCK 308 (318)
T ss_dssp SEEEECSSTTSEEEECSTTCCBCTTSSCBC
T ss_pred eEEecCCCCCCeEEECCCCCEECCCCCCCC
Confidence 35655443 57777877764 45565
No 147
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=49.66 E-value=12 Score=27.57 Aligned_cols=28 Identities=25% Similarity=0.497 Sum_probs=22.2
Q ss_pred CCCCCCCCEEeeC-CCCeEeeCCCCCccC
Q psy6349 89 PNPCQNGGICHDL-INHFSCSCPSGLKRE 116 (145)
Q Consensus 89 ~~~~~~~~~c~~~-~~~~~C~c~~g~~~~ 116 (145)
.++|+.+..|+.. .+.|.|.|+.||.+.
T Consensus 26 ~~~c~~~a~C~~~~~~~~~c~C~~G~ag~ 54 (551)
T 3fby_A 26 PSECHEHADCVLERDGSRSCVCAVGWAGN 54 (551)
T ss_dssp BCCCCTTEEEEECTTSCEEEEECTTEESS
T ss_pred CCCCCCCCeeEeCCCCCEecCCCCCCCCC
Confidence 3578888888765 466899999999886
No 148
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=45.57 E-value=7 Score=29.74 Aligned_cols=45 Identities=22% Similarity=0.478 Sum_probs=29.5
Q ss_pred ecCCCcccCCCCccCCCCCCCCCCCCCeeeeCCCceEEeCCCCcccCCccc
Q psy6349 32 HCMEGYTGSYCSIEINECESDPCQNGATCQDLIGGYSCQCARGFQGQNCEL 82 (145)
Q Consensus 32 ~c~~g~~~~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~c~~g~~g~~c~~ 82 (145)
.|.++|.|..|.+ ...|. ..|..++.|+.. .|+|.++|.|..|..
T Consensus 521 ~C~~gw~g~dc~i-~~~Cp-~~C~ghG~C~~G----~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 521 DKQQTWAIDNVYI-GDGCL-DMCSGHGRCVQG----SCVCDEQWGGLYCDE 565 (725)
T ss_dssp CTTCCEEEEEEEE-ESCSS-GGGGGSEEEETT----EEEECTTEESTTSCE
T ss_pred ccCCCcccccccc-cCCCC-cccCCCcEECCC----CEeeCCCccCCCcCc
Confidence 5777777777731 13343 256777788642 588888888887753
No 149
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=44.55 E-value=11 Score=24.67 Aligned_cols=24 Identities=21% Similarity=0.440 Sum_probs=17.1
Q ss_pred CCCCCeeeeCCCceeEecCCCCCcC
Q psy6349 118 LCHNGTCEDFGNSHRCHCICWDDLR 142 (145)
Q Consensus 118 ~C~~~~c~~~~g~~~c~c~~~~~~~ 142 (145)
.|. ..|.+..++++|.|.+||.+.
T Consensus 133 ~c~-~~C~n~~g~~~C~C~~Gy~l~ 156 (278)
T 3dem_A 133 SCD-HYCHNYIGGYYCSCRFGYILH 156 (278)
T ss_dssp CCS-SEEEEETTEEEEECCTTCEEC
T ss_pred cCC-cCcCCccCCcEEEeCCcceec
Confidence 443 357777788888888888664
No 150
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=43.74 E-value=8.9 Score=25.30 Aligned_cols=22 Identities=18% Similarity=0.330 Sum_probs=16.8
Q ss_pred CeeeeCCCceeEecCCCCCcCC
Q psy6349 122 GTCEDFGNSHRCHCICWDDLRN 143 (145)
Q Consensus 122 ~~c~~~~g~~~c~c~~~~~~~~ 143 (145)
..|.+..|++.|.|.+||.|..
T Consensus 135 ~~C~n~~g~~~csC~~Gy~L~~ 156 (286)
T 1nt0_A 135 HYCHXYLGGYYCSCRVGYILHQ 156 (286)
T ss_dssp SEEEEETTEEEEECCTTEEECT
T ss_pred CccccccCceEeecCCCceecc
Confidence 3677778888888888887654
No 151
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=43.54 E-value=12 Score=27.75 Aligned_cols=32 Identities=19% Similarity=0.490 Sum_probs=23.4
Q ss_pred CCCcCCCCCCCCEEeeCCCCeEeeCCCCCccC
Q psy6349 85 DDCKPNPCQNGGICHDLINHFSCSCPSGLKRE 116 (145)
Q Consensus 85 ~~c~~~~~~~~~~c~~~~~~~~C~c~~g~~~~ 116 (145)
++|...+..+.+.|.+..+.++|.|+.||...
T Consensus 579 ~~C~~~ng~C~~~C~~~~~~~~C~C~~g~~l~ 610 (619)
T 3s94_A 579 NPCAEENGGCSHLCLYRPQGLRCACPIGFELI 610 (619)
T ss_dssp CGGGSGGGGCSSEEEEETTEEEEECCTTCEEC
T ss_pred ccCCCCCCChhHhhccCCCCeEEECCCCCEEC
Confidence 44543333456789988888999999999764
No 152
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=43.23 E-value=6 Score=30.08 Aligned_cols=41 Identities=22% Similarity=0.413 Sum_probs=30.3
Q ss_pred eCCCCcccCCccccCCCCcCCCCCCCCEEeeCCCCeEeeCCCCCccC
Q psy6349 70 QCARGFQGQNCELNVDDCKPNPCQNGGICHDLINHFSCSCPSGLKRE 116 (145)
Q Consensus 70 ~c~~g~~g~~c~~~~~~c~~~~~~~~~~c~~~~~~~~C~c~~g~~~~ 116 (145)
.|.++|.|.+|.. ...|. ..|..++.|++. +|.|.+||.++
T Consensus 521 ~C~~gw~g~dc~i-~~~Cp-~~C~ghG~C~~G----~C~Cd~G~~G~ 561 (725)
T 2e26_A 521 DKQQTWAIDNVYI-GDGCL-DMCSGHGRCVQG----SCVCDEQWGGL 561 (725)
T ss_dssp CTTCCEEEEEEEE-ESCSS-GGGGGSEEEETT----EEEECTTEEST
T ss_pred ccCCCcccccccc-cCCCC-cccCCCcEECCC----CEeeCCCccCC
Confidence 5777888877751 23454 368888999765 89999999986
No 153
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=36.19 E-value=54 Score=17.89 Aligned_cols=69 Identities=20% Similarity=0.404 Sum_probs=44.5
Q ss_pred CCCCCCCCCCCCeeeeC-CCceEEeCCCCcc--cCCcccc-CCCCcC--CCCCCCCEEeeCC-CCeEeeCCCCCcc
Q psy6349 47 NECESDPCQNGATCQDL-IGGYSCQCARGFQ--GQNCELN-VDDCKP--NPCQNGGICHDLI-NHFSCSCPSGLKR 115 (145)
Q Consensus 47 ~~c~~~~c~~~~~c~~~-~~~~~c~c~~g~~--g~~c~~~-~~~c~~--~~~~~~~~c~~~~-~~~~C~c~~g~~~ 115 (145)
..|....|+..+.|.+. .+...|+|..+|. +..|..+ ...|.. ..|....+|.... ....|.|...+..
T Consensus 5 h~C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~~~ 80 (95)
T 1b9w_A 5 HRCIDTNVPENAACYRYLDGTEEWRCLLYFKEDAGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEGSE 80 (95)
T ss_dssp GSCSSCCCCTTEEEEECTTSCEEEEECTTEEEETTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTTEE
T ss_pred cccccCCCCCCcCeEEEcCCCEEEEEECCeEecCCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCCCC
Confidence 45766678888888876 4677899999997 4445432 224442 3356667776655 5667777765543
No 154
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=30.07 E-value=45 Score=22.21 Aligned_cols=14 Identities=50% Similarity=1.402 Sum_probs=11.5
Q ss_pred EEeCCCCcccCCcc
Q psy6349 68 SCQCARGFQGQNCE 81 (145)
Q Consensus 68 ~c~c~~g~~g~~c~ 81 (145)
.|.|.++|.|..|.
T Consensus 208 ~C~C~~g~~G~~Ce 221 (280)
T 2p26_A 208 ICRCDTGYIGKNCE 221 (280)
T ss_dssp EEEECTTEESTTSC
T ss_pred ceeCCCCCcCCcce
Confidence 57889999988874
No 155
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=27.09 E-value=28 Score=25.48 Aligned_cols=14 Identities=14% Similarity=0.028 Sum_probs=10.0
Q ss_pred CCCceeEecCCCCC
Q psy6349 127 FGNSHRCHCICWDD 140 (145)
Q Consensus 127 ~~g~~~c~c~~~~~ 140 (145)
..|.+.|.|..+|-
T Consensus 306 ~~Gs~~C~C~ng~~ 319 (536)
T 3fl7_A 306 PEGATSCECEEGFF 319 (536)
T ss_dssp CTTCSSCEECTTCB
T ss_pred CCCccEEEEecccc
Confidence 45777788877764
No 156
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=25.04 E-value=23 Score=16.95 Aligned_cols=11 Identities=18% Similarity=0.162 Sum_probs=7.9
Q ss_pred EecCCCCCcCC
Q psy6349 133 CHCICWDDLRN 143 (145)
Q Consensus 133 c~c~~~~~~~~ 143 (145)
|.|++||.+++
T Consensus 36 C~C~~G~v~~~ 46 (56)
T 1ccv_A 36 CQCQEGFLRNG 46 (56)
T ss_dssp EEECTTCEEET
T ss_pred CcCCCCeeECC
Confidence 77777776654
No 157
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=23.67 E-value=33 Score=25.03 Aligned_cols=25 Identities=36% Similarity=0.966 Sum_probs=13.1
Q ss_pred CCC-CCEeeeCCCceeeecCCCcccCCCC
Q psy6349 16 LCH-NGTCEDFGNSHRCHCMEGYTGSYCS 43 (145)
Q Consensus 16 ~c~-~~~c~~~~~~~~C~c~~g~~~~~c~ 43 (145)
.|+ +|+|.+.. .|.|..||..+.|.
T Consensus 455 ~C~~~GVCNn~~---~CHC~~GwaPP~C~ 480 (510)
T 3g5c_A 455 ICSGNGVCSNEL---KCVCNRHWIGSDCN 480 (510)
T ss_dssp SGGGTEEEBTTS---CEEECTTEESTTSC
T ss_pred ccCCCCeeCCCC---CcCCCCCCCCCCCC
Confidence 354 35554432 46666666666553
No 158
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=22.40 E-value=25 Score=14.87 Aligned_cols=10 Identities=20% Similarity=0.178 Sum_probs=6.5
Q ss_pred EecCCCCCcC
Q psy6349 133 CHCICWDDLR 142 (145)
Q Consensus 133 c~c~~~~~~~ 142 (145)
|.|++||..+
T Consensus 7 C~C~~G~vrn 16 (32)
T 3ssb_I 7 CYCEDGYARD 16 (32)
T ss_dssp EEECTTEEEC
T ss_pred CCcCCCcEEC
Confidence 7777776543
Done!