Query psy6351
Match_columns 168
No_of_seqs 241 out of 1813
Neff 6.2
Searched_HMMs 29240
Date Sat Aug 17 00:12:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6351.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6351hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygy_A PGDH, D-3-phosphoglycer 99.9 1.7E-26 5.8E-31 208.1 16.0 156 1-159 242-467 (529)
2 1sc6_A PGDH, D-3-phosphoglycer 99.8 3.7E-20 1.3E-24 162.4 7.6 79 1-98 243-323 (404)
3 4dgs_A Dehydrogenase; structur 99.8 6.6E-19 2.3E-23 151.5 7.4 73 1-95 268-340 (340)
4 4g2n_A D-isomer specific 2-hyd 99.8 1.3E-18 4.4E-23 149.9 8.6 73 1-95 273-345 (345)
5 3k5p_A D-3-phosphoglycerate de 99.8 5E-18 1.7E-22 149.6 12.1 97 1-116 254-355 (416)
6 3gg9_A D-3-phosphoglycerate de 99.7 1.7E-18 5.7E-23 149.4 8.0 79 1-101 261-339 (352)
7 3evt_A Phosphoglycerate dehydr 99.7 1.6E-18 5.5E-23 148.1 6.1 80 1-100 237-316 (324)
8 4e5n_A Thermostable phosphite 99.7 3.1E-18 1.1E-22 146.4 7.2 76 1-97 246-328 (330)
9 3hg7_A D-isomer specific 2-hyd 99.7 3.6E-18 1.2E-22 146.0 6.8 80 1-103 240-319 (324)
10 3pp8_A Glyoxylate/hydroxypyruv 99.7 6.1E-18 2.1E-22 143.9 6.9 74 1-97 239-312 (315)
11 3jtm_A Formate dehydrogenase, 99.7 4.7E-18 1.6E-22 146.7 6.2 76 1-95 266-341 (351)
12 2j6i_A Formate dehydrogenase; 99.7 6.8E-18 2.3E-22 146.0 7.1 78 1-97 267-350 (364)
13 1j4a_A D-LDH, D-lactate dehydr 99.7 9.5E-18 3.2E-22 143.3 7.9 77 1-96 245-332 (333)
14 3kb6_A D-lactate dehydrogenase 99.7 2.1E-18 7.2E-23 147.7 3.7 78 1-95 240-331 (334)
15 4hy3_A Phosphoglycerate oxidor 99.7 1.2E-17 4.2E-22 144.9 7.7 74 1-96 276-349 (365)
16 1dxy_A D-2-hydroxyisocaproate 99.7 4.7E-18 1.6E-22 145.2 4.6 78 1-97 243-331 (333)
17 2yq5_A D-isomer specific 2-hyd 99.7 1.2E-17 3.9E-22 143.9 6.7 81 1-100 246-337 (343)
18 2pi1_A D-lactate dehydrogenase 99.7 3.6E-18 1.2E-22 146.3 3.1 75 1-96 240-329 (334)
19 1xdw_A NAD+-dependent (R)-2-hy 99.7 2.1E-17 7.1E-22 141.0 6.3 76 1-95 244-331 (331)
20 2nac_A NAD-dependent formate d 99.6 1.5E-16 5.1E-21 139.2 6.8 73 1-94 293-365 (393)
21 1qp8_A Formate dehydrogenase; 99.6 2.2E-16 7.5E-21 133.4 7.4 78 1-99 220-300 (303)
22 2d0i_A Dehydrogenase; structur 99.6 1.2E-15 4.1E-20 130.2 9.0 80 1-102 245-325 (333)
23 3ba1_A HPPR, hydroxyphenylpyru 99.6 1.1E-15 3.7E-20 130.8 7.9 73 1-95 261-333 (333)
24 2g76_A 3-PGDH, D-3-phosphoglyc 99.6 9.4E-16 3.2E-20 131.4 7.0 65 1-85 265-329 (335)
25 2w2k_A D-mandelate dehydrogena 99.6 1E-15 3.4E-20 131.4 6.3 78 1-100 266-343 (348)
26 2cuk_A Glycerate dehydrogenase 99.6 2.3E-15 7.9E-20 127.5 8.1 72 1-94 239-310 (311)
27 1wwk_A Phosphoglycerate dehydr 99.6 2.1E-15 7.1E-20 127.5 7.3 66 1-85 242-307 (307)
28 2dbq_A Glyoxylate reductase; D 99.6 2.1E-15 7.2E-20 128.6 7.4 78 1-100 250-327 (334)
29 1mx3_A CTBP1, C-terminal bindi 99.6 4.7E-15 1.6E-19 127.6 8.0 77 1-96 269-347 (347)
30 1gdh_A D-glycerate dehydrogena 99.5 7.7E-15 2.6E-19 124.6 7.7 64 1-85 248-311 (320)
31 2ekl_A D-3-phosphoglycerate de 99.5 3.6E-15 1.2E-19 126.3 5.7 68 1-85 242-309 (313)
32 2gcg_A Glyoxylate reductase/hy 99.5 1.5E-14 5.2E-19 122.9 7.7 74 1-95 256-329 (330)
33 3gvx_A Glycerate dehydrogenase 99.5 5.7E-15 1.9E-19 124.4 4.0 64 1-86 219-283 (290)
34 2o4c_A Erythronate-4-phosphate 99.5 2.5E-14 8.7E-19 124.6 7.1 64 1-85 217-280 (380)
35 3oet_A Erythronate-4-phosphate 99.5 1.5E-14 5.2E-19 126.1 5.5 57 1-61 220-276 (381)
36 3d64_A Adenosylhomocysteinase; 97.8 1.2E-06 4.2E-11 78.5 -2.6 67 3-95 376-446 (494)
37 1v8b_A Adenosylhomocysteinase; 97.7 2.2E-06 7.6E-11 76.6 -2.2 58 4-85 360-421 (479)
38 1gtm_A Glutamate dehydrogenase 97.0 6.7E-05 2.3E-09 65.9 -1.0 53 2-60 306-379 (419)
39 3ce6_A Adenosylhomocysteinase; 88.7 0.047 1.6E-06 48.8 -1.6 51 4-60 376-430 (494)
40 2vhw_A Alanine dehydrogenase; 87.9 0.36 1.2E-05 41.0 3.5 31 17-49 274-307 (377)
41 1gpj_A Glutamyl-tRNA reductase 70.9 3.4 0.00012 35.2 3.8 35 13-52 261-298 (404)
42 2eez_A Alanine dehydrogenase; 63.2 1.6 5.4E-05 36.7 0.1 44 14-61 272-326 (369)
43 3f5r_A FACT complex subunit PO 27.4 34 0.0012 26.7 2.4 24 141-164 136-159 (191)
No 1
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.94 E-value=1.7e-26 Score=208.07 Aligned_cols=156 Identities=25% Similarity=0.346 Sum_probs=134.6
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHh------------------
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYS------------------ 62 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~------------------ 62 (168)
|++||++|+|+||++|||+.||..++ |||+++|+++|||++|+|.+++.+++..+++++
T Consensus 242 L~~al~~g~i~ga~lDv~~~eP~~~~---~L~~~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~~~~~v~~~~~ 318 (529)
T 1ygy_A 242 LADAITGGHVRAAGLDVFATEPCTDS---PLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFVPDAVNVGGG 318 (529)
T ss_dssp HHHHHHTSSEEEEEESSCSSSSCSCC---GGGGCTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCCCTTBCSCCST
T ss_pred HHHHHHcCCccEEEEeeccCCCCCCc---hHHhCCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcccCCccc
Confidence 46899999999999999999998654 999999999999999999999999999888865
Q ss_pred ---------------------------------hcccccc--ccccchHHHHHhhccCCCCCCccccChhhHHhhCCceE
Q psy6351 63 ---------------------------------LLGAELK--NKQFLTTPVQIGLLSGRTSNGLNFINVNTYASEGGLKV 107 (168)
Q Consensus 63 ---------------------------------~~g~~~~--~~~~lt~a~l~~~L~~~~~~~vn~VNa~~la~~~GI~v 107 (168)
.|+|+.. +...++++.|+++|+...++.+|++|+..+|+++||++
T Consensus 319 ~~hd~i~P~l~La~~lg~~~~qla~g~~~ditria~G~~~~~~i~~~n~a~l~g~L~~~~~~~~~~vnA~~iA~e~Gi~i 398 (529)
T 1ygy_A 319 VVNEEVAPWLDLVRKLGVLAGVLSDELPVSLSVQVRGELAAEEVEVLRLSALRGLFSAVIEDAVTFVNAPALAAERGVTA 398 (529)
T ss_dssp TSCTTTTTHHHHHHHHHHHHHHTSSSCCSEEEEEEEEGGGGSCCHHHHHHHHHHHTGGGSCTTCCCCCHHHHHHHHSCEE
T ss_pred ccchhhhhHHHHHHHHHHHHHHHhCCCceEEEEEEEeeccccCCcHHHHHHHHHhcCCCCCCCccccCHHHHHHHcCCEE
Confidence 1112221 23567899999999987777799999999999999999
Q ss_pred EEEECCCC--CCceEEEEEee-c--------------CcccEEEEcceEeeccccccEEEEeecCCCCC
Q psy6351 108 AYEHDPSS--SQNLVALAFGS-N--------------VAKHVLTVKQGLFTELLSYSLILVLQEDTAQW 159 (168)
Q Consensus 108 ~e~~~~~~--~~n~itv~~~~-~--------------~~~~l~~i~~~~~~~~~eG~~li~r~~D~pg~ 159 (168)
.+.+.+.+ +.|.+++++.+ + +.+++++||+|.+++.++|++|+++|.|+||+
T Consensus 399 ~~~~~~~~~~~~n~v~v~~~~~~~~~~~v~Gt~~gg~g~~~i~~i~g~~v~~~~~~~~l~v~~~D~PG~ 467 (529)
T 1ygy_A 399 EICKASESPNHRSVVDVRAVGADGSVVTVSGTLYGPQLSQKIVQINGRHFDLRAQGINLIIHYVDRPGA 467 (529)
T ss_dssp EEEEESCCSSSSEEEEEEEECTTSCEEEEEEEEETTTTEEEEEEETTEEEEEESCSEEEEEEESCCTTH
T ss_pred EEEEccCCCCCCCEEEEEEEECCCCEEEEEEEEeCCCCcEEEEEECCEEEEecCCccEEEEEcCCCCch
Confidence 99886543 48999998875 2 46799999999999999999999999999997
No 2
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.80 E-value=3.7e-20 Score=162.36 Aligned_cols=79 Identities=32% Similarity=0.397 Sum_probs=63.7
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCC--CCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKS--EQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPV 78 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~--~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~ 78 (168)
|++||++|+++|||||||++||++. ++.+|||++|||++|||+||+|.|++.+++.++++ +
T Consensus 243 L~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~~~T~ea~~~~~~~~~~-----------------n 305 (404)
T 1sc6_A 243 LADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGSTQEAQENIGLEVAG-----------------K 305 (404)
T ss_dssp HHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSCCSHHHHHHHHHHHHH-----------------H
T ss_pred HHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCCCCcHHHHHHHHHHHHH-----------------H
Confidence 5789999999999999999999763 23479999999999999999999999999999999 5
Q ss_pred HHhhccCCCCCCccccChhh
Q psy6351 79 QIGLLSGRTSNGLNFINVNT 98 (168)
Q Consensus 79 l~~~L~~~~~~~vn~VNa~~ 98 (168)
+..|+++ +.+.|.||.+.
T Consensus 306 l~~~l~g--~~~~~~vn~p~ 323 (404)
T 1sc6_A 306 LIKYSDN--GSTLSAVNFPE 323 (404)
T ss_dssp HHHHHHH--CCCTTBSSSCC
T ss_pred HHHHHcC--CCCcceecccc
Confidence 9999986 46789999664
No 3
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.76 E-value=6.6e-19 Score=151.47 Aligned_cols=73 Identities=29% Similarity=0.499 Sum_probs=61.6
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|++||++|+|+|||||||++||++++ |||++|||++|||+||+|.|++.+++..+++ +|.
T Consensus 268 L~~aL~~g~i~gA~LDVf~~EP~~~~---~L~~~~nvilTPHia~~t~e~~~~~~~~~~~-----------------nl~ 327 (340)
T 4dgs_A 268 LIEALKSGTIAGAGLDVFVNEPAIRS---EFHTTPNTVLMPHQGSATVETRMAMGKLVLA-----------------NLA 327 (340)
T ss_dssp -------CCSSEEEESCCSSSSSCCS---HHHHSSSEEECSSCSSCCHHHHHHHHHHHHH-----------------HHH
T ss_pred HHHHHHcCCceEEEeCCcCCCCCCcc---chhhCCCEEEcCcCCcCCHHHHHHHHHHHHH-----------------HHH
Confidence 68999999999999999999998876 9999999999999999999999999999999 599
Q ss_pred hhccCCCCCCccccC
Q psy6351 81 GLLSGRTSNGLNFIN 95 (168)
Q Consensus 81 ~~L~~~~~~~vn~VN 95 (168)
.|++| +.+.|.||
T Consensus 328 ~~~~g--~~~~~~Vn 340 (340)
T 4dgs_A 328 AHFAG--EKAPNTVN 340 (340)
T ss_dssp HHHTT--SCCTTBC-
T ss_pred HHHcC--CCCCCCcC
Confidence 99997 57888887
No 4
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.75 E-value=1.3e-18 Score=149.93 Aligned_cols=73 Identities=27% Similarity=0.305 Sum_probs=67.0
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|++||++|+|+|||||||++||+.++ |||++|||++|||+||+|.|++.+++..+++ +|.
T Consensus 273 L~~aL~~g~i~gA~LDVf~~EP~~~~---pL~~~~nvilTPHia~~t~e~~~~~~~~~~~-----------------ni~ 332 (345)
T 4g2n_A 273 LIEALRSKHLFAAGLDVFANEPAIDP---RYRSLDNIFLTPHIGSATHETRDAMGWLLIQ-----------------GIE 332 (345)
T ss_dssp HHHHHHHTSEEEEEESCCTTTTSCCT---TGGGCTTEEECCSCTTCBHHHHHHHHHHHHH-----------------HHH
T ss_pred HHHHHHhCCceEEEecCCCCCCCCCc---hHHhCCCEEEcCccCcCCHHHHHHHHHHHHH-----------------HHH
Confidence 57999999999999999999995554 9999999999999999999999999999999 599
Q ss_pred hhccCCCCCCccccC
Q psy6351 81 GLLSGRTSNGLNFIN 95 (168)
Q Consensus 81 ~~L~~~~~~~vn~VN 95 (168)
.|++| +.+.|.|+
T Consensus 333 ~~l~g--~~~~~~V~ 345 (345)
T 4g2n_A 333 ALNQS--DVPDNLIS 345 (345)
T ss_dssp HHHTT--CCCTTBCC
T ss_pred HHHcC--CCCCCCcC
Confidence 99997 57888875
No 5
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=99.75 E-value=5e-18 Score=149.61 Aligned_cols=97 Identities=28% Similarity=0.362 Sum_probs=80.4
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCC--CCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKS--EQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPV 78 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~--~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~ 78 (168)
|++||++|+|+|||||||++||++. ++.+||+++|||++|||+||+|.|++.+++.++++ +
T Consensus 254 L~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~-----------------n 316 (416)
T 3k5p_A 254 LAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQERIGTEVTR-----------------K 316 (416)
T ss_dssp HHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHHHHHHHHHHHH-----------------H
T ss_pred HHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHHHHHHHHHHHH-----------------H
Confidence 5789999999999999999999763 23469999999999999999999999999999999 5
Q ss_pred HHhhccCCCCCCccccChhhHH--hh-CCceEEEEECCCCC
Q psy6351 79 QIGLLSGRTSNGLNFINVNTYA--SE-GGLKVAYEHDPSSS 116 (168)
Q Consensus 79 l~~~L~~~~~~~vn~VNa~~la--~~-~GI~v~e~~~~~~~ 116 (168)
|..||++ +.+.|.||.+.+. .. ...++...|...++
T Consensus 317 l~~~l~~--g~~~~~Vn~p~~~~~~~~~~~r~~~~h~n~p~ 355 (416)
T 3k5p_A 317 LVEYSDV--GSTVGAVNFPQVQLPPRPTGTRFMHVHENRPG 355 (416)
T ss_dssp HHHHHHH--CCCTTBSSSCCCCCCCCSSSEEEEEEECCCTT
T ss_pred HHHHHhh--CCCCceeeCCCcCCCCCCCceEEEEEecCCcc
Confidence 9999975 5778888876544 22 23467777766664
No 6
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.75 E-value=1.7e-18 Score=149.44 Aligned_cols=79 Identities=29% Similarity=0.339 Sum_probs=71.9
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|++||++|+|+||+||||++||++.+ +|||++|||++|||+||+|.+++.+++..+++ ||+
T Consensus 261 L~~aL~~g~i~gA~lDV~~~EPl~~~--~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~-----------------ni~ 321 (352)
T 3gg9_A 261 MVTALNRGRPGMAAIDVFETEPILQG--HTLLRMENCICTPHIGYVERESYEMYFGIAFQ-----------------NIL 321 (352)
T ss_dssp HHHHHHHTSSSEEEECCCSSSCCCSC--CGGGGCTTEEECCSCTTCBHHHHHHHHHHHHH-----------------HHH
T ss_pred HHHHHHhCCccEEEecccCCCCCCCC--ChhhcCCCEEECCCCCCCCHHHHHHHHHHHHH-----------------HHH
Confidence 57999999999999999999998744 59999999999999999999999999999999 599
Q ss_pred hhccCCCCCCccccChhhHHh
Q psy6351 81 GLLSGRTSNGLNFINVNTYAS 101 (168)
Q Consensus 81 ~~L~~~~~~~vn~VNa~~la~ 101 (168)
.|++| .+.|.||++.+..
T Consensus 322 ~~~~G---~p~~~Vn~~~~~~ 339 (352)
T 3gg9_A 322 DILQG---NVDSVANPTALAP 339 (352)
T ss_dssp HHHTT---CCTTBSCGGGSSC
T ss_pred HHHcC---CCCcccCHHHHHH
Confidence 99986 5789999887654
No 7
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.73 E-value=1.6e-18 Score=148.07 Aligned_cols=80 Identities=19% Similarity=0.149 Sum_probs=68.3
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|++||++|+|+||+||||++||++.+ +|||++|||++|||+||+|.+++.+++..+++ |++
T Consensus 237 L~~aL~~g~i~gA~lDV~~~EPl~~~--~pL~~~~nvilTPHia~~t~~~~~~~~~~~~~-----------------nl~ 297 (324)
T 3evt_A 237 LMTALDHHQLSMAALDVTEPEPLPTD--HPLWQRDDVLITPHISGQIAHFRATVFPIFAA-----------------NFA 297 (324)
T ss_dssp HHHHHHTTSCSEEEESSCSSSSCCTT--CGGGGCSSEEECCSCTTCCCCHHHHHHHHHHH-----------------HHH
T ss_pred HHHHHHhCCceEEEeCCCCCCCCCCC--ChhhcCCCEEEcCccccChHHHHHHHHHHHHH-----------------HHH
Confidence 57899999999999999999997754 69999999999999999999999999999999 599
Q ss_pred hhccCCCCCCccccChhhHH
Q psy6351 81 GLLSGRTSNGLNFINVNTYA 100 (168)
Q Consensus 81 ~~L~~~~~~~vn~VNa~~la 100 (168)
.|+++. ..+.|.||.+...
T Consensus 298 ~~l~~~-~~~~n~V~~~~~~ 316 (324)
T 3evt_A 298 QFVKDG-TLVRNQVDLNRGY 316 (324)
T ss_dssp HHHHHS-CCCSCBCC-----
T ss_pred HHHhCC-CCCCceECccccc
Confidence 999762 3568999977544
No 8
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.73 E-value=3.1e-18 Score=146.39 Aligned_cols=76 Identities=28% Similarity=0.492 Sum_probs=69.7
Q ss_pred CHHHHhcCCeeEEEeecCCCC-------CCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhcccccccccc
Q psy6351 1 MKSELRCGHCGGAALDVFCEE-------PPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQF 73 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~E-------P~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~ 73 (168)
|++||++|+|+|||||||++| |++.+ +|||++|||++|||+||+|.|++.+++..+++
T Consensus 246 L~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~--~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~------------- 310 (330)
T 4e5n_A 246 VLAALERGQLGGYAADVFEMEDWARADRPQQID--PALLAHPNTLFTPHIGSAVRAVRLEIERCAAQ------------- 310 (330)
T ss_dssp HHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCC--HHHHTCSSEEECSSCTTCCHHHHHHHHHHHHH-------------
T ss_pred HHHHHHhCCccEEEecccccccccccCCCCCCC--chHHcCCCEEECCcCCCChHHHHHHHHHHHHH-------------
Confidence 578999999999999999999 86544 69999999999999999999999999999999
Q ss_pred chHHHHHhhccCCCCCCccccChh
Q psy6351 74 LTTPVQIGLLSGRTSNGLNFINVN 97 (168)
Q Consensus 74 lt~a~l~~~L~~~~~~~vn~VNa~ 97 (168)
+|..|++| +.+.|.||.+
T Consensus 311 ----ni~~~~~g--~~~~~~vn~~ 328 (330)
T 4e5n_A 311 ----NILQALAG--ERPINAVNRL 328 (330)
T ss_dssp ----HHHHHHTT--SCCTTBSSCC
T ss_pred ----HHHHHHcC--CCCCCccCCC
Confidence 59999997 5789999974
No 9
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.72 E-value=3.6e-18 Score=146.00 Aligned_cols=80 Identities=26% Similarity=0.292 Sum_probs=67.1
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|++||++|+|+||+||||++||++.+ +|||++|||++|||+||+|.+ .+++..+++ |+.
T Consensus 240 L~~aL~~g~i~ga~lDV~~~EPl~~~--~pL~~~~nvilTPHia~~t~~--~~~~~~~~~-----------------nl~ 298 (324)
T 3hg7_A 240 LLTALRTGKLGMAVLDVFEQEPLPAD--SPLWGQPNLIITPHNSAYSFP--DDVAQIFVR-----------------NYI 298 (324)
T ss_dssp HHHHHHTTSSSEEEESCCSSSSCCTT--CTTTTCTTEEECCSCSSCCCH--HHHHHHHHH-----------------HHH
T ss_pred HHHHHHcCCceEEEeccCCCCCCCCC--ChhhcCCCEEEeCCCccccHH--HHHHHHHHH-----------------HHH
Confidence 57999999999999999999997754 699999999999999999987 468889999 599
Q ss_pred hhccCCCCCCccccChhhHHhhC
Q psy6351 81 GLLSGRTSNGLNFINVNTYASEG 103 (168)
Q Consensus 81 ~~L~~~~~~~vn~VNa~~la~~~ 103 (168)
+|++| +.+.|.||.....+.+
T Consensus 299 ~~~~G--~~~~~~V~~~~~~~~~ 319 (324)
T 3hg7_A 299 RFIDG--QPLDGKIDFDKGYEGH 319 (324)
T ss_dssp HHHTT--CCCTTBCCCC------
T ss_pred HHHcC--CCCcceEChhhhcccc
Confidence 99997 5789999998877654
No 10
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=99.72 E-value=6.1e-18 Score=143.90 Aligned_cols=74 Identities=30% Similarity=0.391 Sum_probs=66.1
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|++||++|+|+||+||||++||++.+ +|||++|||++|||+||+|.+ .+++..+++ |++
T Consensus 239 L~~aL~~g~i~gA~lDV~~~EPl~~~--~pL~~~~nvilTPHia~~t~~--~~~~~~~~~-----------------ni~ 297 (315)
T 3pp8_A 239 LLAALDSGKLKGAMLDVFSQEPLPQE--SPLWRHPRVAMTPHIAAVTRP--AEAIDYISR-----------------TIT 297 (315)
T ss_dssp HHHHHHHTSEEEEEESCCSSSSCCTT--CGGGGCTTEEECSSCSSCCCH--HHHHHHHHH-----------------HHH
T ss_pred HHHHHHhCCccEEEcCCCCCCCCCCC--ChhhcCCCEEECCCCCcccHH--HHHHHHHHH-----------------HHH
Confidence 57999999999999999999998754 699999999999999999986 478899999 599
Q ss_pred hhccCCCCCCccccChh
Q psy6351 81 GLLSGRTSNGLNFINVN 97 (168)
Q Consensus 81 ~~L~~~~~~~vn~VNa~ 97 (168)
+|++| +.+.|.||..
T Consensus 298 ~~~~G--~~~~~~V~~~ 312 (315)
T 3pp8_A 298 QLEKG--EPVTGQVDRA 312 (315)
T ss_dssp HHHHT--CCCCCBCCCC
T ss_pred HHHcC--CCCCceECcc
Confidence 99997 5788999854
No 11
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.72 E-value=4.7e-18 Score=146.66 Aligned_cols=76 Identities=24% Similarity=0.331 Sum_probs=67.7
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|++||++|+|+|||||||++||++.+ +|||++|||++|||+||.|.|++.+++..+++ +|.
T Consensus 266 L~~aL~~g~i~ga~lDV~~~EP~~~~--~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~-----------------nl~ 326 (351)
T 3jtm_A 266 VVDAVESGHIGGYSGDVWDPQPAPKD--HPWRYMPNQAMTPHTSGTTIDAQLRYAAGTKD-----------------MLE 326 (351)
T ss_dssp HHHHHHHTSEEEEEESCCSSSSCCTT--CGGGTSTTBCCCCSCGGGSHHHHHHHHHHHHH-----------------HHH
T ss_pred HHHHHHhCCccEEEeCCCCCCCCCCC--ChhhcCCCEEECCcCCCCCHHHHHHHHHHHHH-----------------HHH
Confidence 57899999999999999999998755 69999999999999999999999999999999 599
Q ss_pred hhccCCCCCCccccC
Q psy6351 81 GLLSGRTSNGLNFIN 95 (168)
Q Consensus 81 ~~L~~~~~~~vn~VN 95 (168)
.|++|..-.+.|+|+
T Consensus 327 ~~~~g~~~~~~~~i~ 341 (351)
T 3jtm_A 327 RYFKGEDFPTENYIV 341 (351)
T ss_dssp HHHHTCCCCGGGEEE
T ss_pred HHHcCCCCCCceEEe
Confidence 999974224677765
No 12
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.71 E-value=6.8e-18 Score=145.98 Aligned_cols=78 Identities=21% Similarity=0.330 Sum_probs=68.5
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccC--C---ceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccch
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKH--P---KVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLT 75 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~--~---nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt 75 (168)
|++||++|+|+|||||||++||++.+ +|||.+ | ||++|||+||+|.+++.+++..+++
T Consensus 267 L~~aL~~g~i~gA~LDVf~~EP~~~~--~pL~~~~~~~~~nvilTPHia~~t~e~~~~~~~~~~~--------------- 329 (364)
T 2j6i_A 267 VAAALESGQLRGYGGDVWFPQPAPKD--HPWRDMRNKYGAGNAMTPHYSGTTLDAQTRYAQGTVN--------------- 329 (364)
T ss_dssp HHHHHHHTSEEEEEESCCSSSSCCTT--CHHHHCCCTTSCCEEECCSCGGGSHHHHHHHHHHHHH---------------
T ss_pred HHHHHHcCCCcEEEEecCCCCCCCCC--ChHHhccCCccCcEEECCccCcCCHHHHHHHHHHHHH---------------
Confidence 57999999999999999999997754 599999 9 9999999999999999999999999
Q ss_pred HHHHHhhccCC-CCCCccccChh
Q psy6351 76 TPVQIGLLSGR-TSNGLNFINVN 97 (168)
Q Consensus 76 ~a~l~~~L~~~-~~~~vn~VNa~ 97 (168)
++..|++|. ...+.|.||..
T Consensus 330 --nl~~~~~g~~~~~~~n~v~~~ 350 (364)
T 2j6i_A 330 --ILESFFTGKFDYRPQDIILLN 350 (364)
T ss_dssp --HHHHHHTTCCCCCGGGEEEBT
T ss_pred --HHHHHHcCCCCCCCCceecCC
Confidence 599999873 22567887643
No 13
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=99.71 E-value=9.5e-18 Score=143.26 Aligned_cols=77 Identities=25% Similarity=0.282 Sum_probs=66.8
Q ss_pred CHHHHhcCCeeEEEeecCCCCCC--CCC-----CCh----hhccCCceEEccCCCcchHHHHHHHHHHHHHHhhcccccc
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPP--KSE-----QTF----ELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELK 69 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~--~~~-----~~~----pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~ 69 (168)
|++||++|+|+|||||||++||+ +.+ ..+ |||++|||++|||+||+|.+++.+++..+++
T Consensus 245 L~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nvilTPHia~~t~~~~~~~~~~~~~--------- 315 (333)
T 1j4a_A 245 VIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVTPKTAFYTTHAVRNMVVKAFD--------- 315 (333)
T ss_dssp HHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEECSSCTTCBHHHHHHHHHHHHH---------
T ss_pred HHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCEEECCccccCHHHHHHHHHHHHHH---------
Confidence 57999999999999999999993 221 112 6999999999999999999999999999999
Q ss_pred ccccchHHHHHhhccCCCCCCccccCh
Q psy6351 70 NKQFLTTPVQIGLLSGRTSNGLNFINV 96 (168)
Q Consensus 70 ~~~~lt~a~l~~~L~~~~~~~vn~VNa 96 (168)
++..|++| +.+.|.||.
T Consensus 316 --------nl~~~~~g--~~~~~~v~~ 332 (333)
T 1j4a_A 316 --------NNLELVEG--KEAETPVKV 332 (333)
T ss_dssp --------HHHHHHTT--CCCSSBCCC
T ss_pred --------HHHHHHcC--CCCCccccC
Confidence 59999997 567888874
No 14
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=99.71 E-value=2.1e-18 Score=147.73 Aligned_cols=78 Identities=26% Similarity=0.325 Sum_probs=64.7
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCC--C-----------ChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhcccc
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSE--Q-----------TFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAE 67 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~--~-----------~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~ 67 (168)
|++||++|+|+|||||||++||.+.+ + ..||+++|||++|||+||+|.|++.++++.+++
T Consensus 240 L~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~~~~L~~~~nvilTPHia~~T~ea~~~~~~~~~~------- 312 (334)
T 3kb6_A 240 LYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHIAYYTDKSLERIREETVK------- 312 (334)
T ss_dssp HHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHH-------
T ss_pred HHHHHHhCCceEEEEeCCCCCCCcccccccccccccccccchhhccCCCEEECCchhhChHHHHHHHHHHHHH-------
Confidence 68999999999999999999996422 0 127899999999999999999999999999999
Q ss_pred ccccccchHHHHHhhccCCCC-CCccccC
Q psy6351 68 LKNKQFLTTPVQIGLLSGRTS-NGLNFIN 95 (168)
Q Consensus 68 ~~~~~~lt~a~l~~~L~~~~~-~~vn~VN 95 (168)
+++.|++|... ..+|+|+
T Consensus 313 ----------ni~~~l~Ge~~~~~~n~v~ 331 (334)
T 3kb6_A 313 ----------VVKAFVKGDLEQIKGNFVV 331 (334)
T ss_dssp ----------HHHHHHHTCGGGGGGGEEE
T ss_pred ----------HHHHHHcCCCCcCCCCcCC
Confidence 59999997421 1345554
No 15
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.71 E-value=1.2e-17 Score=144.85 Aligned_cols=74 Identities=18% Similarity=0.129 Sum_probs=67.9
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|++||++|+|+ ||||||++||++.+ +|||++|||++|||+||+|.|++.+++..+++ +|.
T Consensus 276 L~~aL~~g~i~-aaLDV~~~EPl~~~--~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~-----------------ni~ 335 (365)
T 4hy3_A 276 LMAAVSSGHIV-AASDVYPEEPLPLD--HPVRSLKGFIRSAHRAGALDSAFKKMGDMVLE-----------------DMD 335 (365)
T ss_dssp HHHHHHTTSSE-EEESCCSSSSCCTT--CGGGTCTTEEECCSCSSCCHHHHHHHHHHHHH-----------------HHH
T ss_pred HHHHHHcCCce-EEeeCCCCCCCCCC--ChhhcCCCEEECCccccCHHHHHHHHHHHHHH-----------------HHH
Confidence 57999999999 99999999997654 59999999999999999999999999999999 599
Q ss_pred hhccCCCCCCccccCh
Q psy6351 81 GLLSGRTSNGLNFINV 96 (168)
Q Consensus 81 ~~L~~~~~~~vn~VNa 96 (168)
.|++| +.+.++||+
T Consensus 336 ~~~~G--~~~~~~vn~ 349 (365)
T 4hy3_A 336 LMDRG--LPPMRCKRA 349 (365)
T ss_dssp HHHTT--CCCCSSEEC
T ss_pred HHHcC--CCccccccc
Confidence 99997 567888886
No 16
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=99.70 E-value=4.7e-18 Score=145.25 Aligned_cols=78 Identities=23% Similarity=0.278 Sum_probs=67.5
Q ss_pred CHHHHhcCCeeEEEeecCCCCCC-----------CCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhcccccc
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPP-----------KSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELK 69 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~-----------~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~ 69 (168)
|++||++|+|+|||||||++||+ +++..+|||++|||++|||+||+|.|++.+++..+++
T Consensus 243 L~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~TPHia~~t~e~~~~~~~~~~~--------- 313 (333)
T 1dxy_A 243 MLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIAYYTETAVHNMVYFSLQ--------- 313 (333)
T ss_dssp HHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEECSSCTTCSHHHHHHHHHHHHH---------
T ss_pred HHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEECCccccChHHHHHHHHHHHHH---------
Confidence 57899999999999999999993 1111148999999999999999999999999999999
Q ss_pred ccccchHHHHHhhccCCCCCCccccChh
Q psy6351 70 NKQFLTTPVQIGLLSGRTSNGLNFINVN 97 (168)
Q Consensus 70 ~~~~lt~a~l~~~L~~~~~~~vn~VNa~ 97 (168)
++..|++| +.+.|.||.+
T Consensus 314 --------nl~~~~~g--~~~~~~v~~~ 331 (333)
T 1dxy_A 314 --------HLVDFLTK--GETSTEVTGP 331 (333)
T ss_dssp --------HHHHHHHH--SCCTTEECC-
T ss_pred --------HHHHHHcC--CCCCceeCCC
Confidence 59999997 5678999865
No 17
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=99.70 E-value=1.2e-17 Score=143.87 Aligned_cols=81 Identities=22% Similarity=0.302 Sum_probs=66.7
Q ss_pred CHHHHhcCCeeEEEeecCCCCCC--CCC-C--------ChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhcccccc
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPP--KSE-Q--------TFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELK 69 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~--~~~-~--------~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~ 69 (168)
|++||++|+|+|||||||++||+ +.+ . .+|||++|||++|||+||+|.|++.+++..+++
T Consensus 246 L~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~--------- 316 (343)
T 2yq5_A 246 LIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVITPHSAFYTETSIRNMVQICLT--------- 316 (343)
T ss_dssp HHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEEECSSCTTCBHHHHHHHHHHHHH---------
T ss_pred HHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEEECCccccchHHHHHHHHHHHHH---------
Confidence 57899999999999999999994 221 0 148999999999999999999999999999999
Q ss_pred ccccchHHHHHhhccCCCCCCccccChhhHH
Q psy6351 70 NKQFLTTPVQIGLLSGRTSNGLNFINVNTYA 100 (168)
Q Consensus 70 ~~~~lt~a~l~~~L~~~~~~~vn~VNa~~la 100 (168)
++..|++| +.+.|.||.....
T Consensus 317 --------ni~~~l~g--~~~~~~v~~~~~~ 337 (343)
T 2yq5_A 317 --------DQLTIAKG--GRPRSIVNLTASG 337 (343)
T ss_dssp --------HHHHHHTT--CCCTTBC------
T ss_pred --------HHHHHHcC--CCCCceECCccCC
Confidence 59999997 6789999986543
No 18
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.70 E-value=3.6e-18 Score=146.26 Aligned_cols=75 Identities=25% Similarity=0.306 Sum_probs=68.0
Q ss_pred CHHHHhcCCeeEEEeecCCCCCC---------------CCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhcc
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPP---------------KSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLG 65 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~---------------~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g 65 (168)
|++||++|+|+|||||||++||+ +. .+|||++|||++|||+||+|.+++.+++..+++
T Consensus 240 L~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~--~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~----- 312 (334)
T 2pi1_A 240 LYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLK--ILELACKDNVIITPHIAYYTDKSLERIREETVK----- 312 (334)
T ss_dssp HHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHH--HHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHH-----
T ss_pred HHHHHHhCCceEEEeecCCCCCCccccccccccccccCcc--CChhhcCCCEEECCccccChHHHHHHHHHHHHH-----
Confidence 57999999999999999999997 22 369999999999999999999999999999999
Q ss_pred ccccccccchHHHHHhhccCCCCCCccccCh
Q psy6351 66 AELKNKQFLTTPVQIGLLSGRTSNGLNFINV 96 (168)
Q Consensus 66 ~~~~~~~~lt~a~l~~~L~~~~~~~vn~VNa 96 (168)
+|..|++| +.+.|.||.
T Consensus 313 ------------ni~~~~~g--~~~~~~Vn~ 329 (334)
T 2pi1_A 313 ------------VVKAFVKG--DLEQIKGNF 329 (334)
T ss_dssp ------------HHHHHHHT--CGGGGGGGE
T ss_pred ------------HHHHHHcC--CCCCceECc
Confidence 59999997 578888885
No 19
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=99.69 E-value=2.1e-17 Score=141.03 Aligned_cols=76 Identities=28% Similarity=0.335 Sum_probs=66.1
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCC--CC-----CC----hhhccC-CceEEccCCCcchHHHHHHHHHHHHHHhhccccc
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPK--SE-----QT----FELIKH-PKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAEL 68 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~--~~-----~~----~pL~~~-~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~ 68 (168)
|++||++|+|+|||||||++||+. .+ .. +|||++ |||++|||+||+|.|++.+++..+++
T Consensus 244 L~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~nvilTPHia~~t~~~~~~~~~~~~~-------- 315 (331)
T 1xdw_A 244 VIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYPRVLITPHLGSYTDEAVKNMVEVSYQ-------- 315 (331)
T ss_dssp HHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTTTEEECCSCTTCSHHHHHHHHHHHHH--------
T ss_pred HHHHHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCCCEEEcCccccChHHHHHHHHHHHHH--------
Confidence 578999999999999999999941 11 11 379999 99999999999999999999999999
Q ss_pred cccccchHHHHHhhccCCCCCCccccC
Q psy6351 69 KNKQFLTTPVQIGLLSGRTSNGLNFIN 95 (168)
Q Consensus 69 ~~~~~lt~a~l~~~L~~~~~~~vn~VN 95 (168)
++..|++| +.+.|.||
T Consensus 316 ---------nl~~~~~g--~~~~~~v~ 331 (331)
T 1xdw_A 316 ---------NLKDLAET--GDCPNKIK 331 (331)
T ss_dssp ---------HHHHHHHH--SCCTTBCC
T ss_pred ---------HHHHHHcC--CCCCCCCC
Confidence 59999997 56788886
No 20
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.64 E-value=1.5e-16 Score=139.19 Aligned_cols=73 Identities=22% Similarity=0.237 Sum_probs=64.8
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|++||++|+|+|||||||++||.+.+ +|||++|||++|||+||.|.|++.+++..+++ ||+
T Consensus 293 L~~aL~~g~i~gA~lDV~~~EP~~~~--~pL~~~~nvilTPHia~~T~e~~~~~~~~~~~-----------------nl~ 353 (393)
T 2nac_A 293 VARALESGRLAGYAGDVWFPQPAPKD--HPWRTMPYNGMTPHISGTTLTAQARYAAGTRE-----------------ILE 353 (393)
T ss_dssp HHHHHHTTSEEEEEESCCSSSSCCTT--CGGGTSTTBCCCCSCTTCSHHHHHHHHHHHHH-----------------HHH
T ss_pred HHHHHHcCCeeEEEEEecCCCCCCCC--ChhHcCCCEEECCCCCcCcHHHHHHHHHHHHH-----------------HHH
Confidence 57899999999999999999997644 59999999999999999999999999999999 599
Q ss_pred hhccCCCCCCcccc
Q psy6351 81 GLLSGRTSNGLNFI 94 (168)
Q Consensus 81 ~~L~~~~~~~vn~V 94 (168)
.|++| +...|.+
T Consensus 354 ~~~~G--~~~~~~~ 365 (393)
T 2nac_A 354 CFFEG--RPIRDEY 365 (393)
T ss_dssp HHHHT--CCCCGGG
T ss_pred HHHcC--CCCccee
Confidence 99987 3445543
No 21
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.64 E-value=2.2e-16 Score=133.44 Aligned_cols=78 Identities=17% Similarity=0.145 Sum_probs=70.3
Q ss_pred CHHHHhcCCeeEEEeecC-CCCCCCCCCChhhccCCceEEccCCCcc--hHHHHHHHHHHHHHHhhccccccccccchHH
Q psy6351 1 MKSELRCGHCGGAALDVF-CEEPPKSEQTFELIKHPKVIVTPHLGAS--TKEAQIRQDKQSIFYSLLGAELKNKQFLTTP 77 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf-~~EP~~~~~~~pL~~~~nvilTPHig~~--T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a 77 (168)
|++||++|+|+|||+||| ++||++.+ +|||++||+++|||+||. |.|++.+++..+++
T Consensus 220 L~~aL~~g~i~gA~lDv~~~~ep~~~~--~~L~~~~nviltPH~~~~~~t~e~~~~~~~~~~~----------------- 280 (303)
T 1qp8_A 220 VLRILKERPQFIFASDVWWGRNDFAKD--AEFFSLPNVVATPWVAGGYGNERVWRQMVMEAVR----------------- 280 (303)
T ss_dssp HHHHHHHCTTCEEEESCCTTTTCCGGG--HHHHTSTTEEECCSCSSSSSCHHHHHHHHHHHHH-----------------
T ss_pred HHHHHHhCCceEEEeccCCCCCCCCCC--ChhhcCCCEEECCCcCCCCCCHHHHHHHHHHHHH-----------------
Confidence 578999999999999999 88997744 699999999999999998 99999999999999
Q ss_pred HHHhhccCCCCCCccccChhhH
Q psy6351 78 VQIGLLSGRTSNGLNFINVNTY 99 (168)
Q Consensus 78 ~l~~~L~~~~~~~vn~VNa~~l 99 (168)
|+..|++| +.+.|.||.+..
T Consensus 281 nl~~~~~g--~~~~~~v~~~~y 300 (303)
T 1qp8_A 281 NLITYATG--GRPRNIAKREDY 300 (303)
T ss_dssp HHHHHHTT--SCCSCBCCGGGT
T ss_pred HHHHHHcC--CCCCceeCHHHc
Confidence 59999997 578999997653
No 22
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.61 E-value=1.2e-15 Score=130.24 Aligned_cols=80 Identities=25% Similarity=0.358 Sum_probs=72.8
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCC-ceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHP-KVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQ 79 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~-nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l 79 (168)
|++||++|+|+|||+|||+.||+++ +||++++ |+++|||+|+.|.+++.+++..+++ ++
T Consensus 245 L~~aL~~~~i~gaglDv~~~EP~~~---~~L~~~~~nviltPh~~~~t~~~~~~~~~~~~~-----------------n~ 304 (333)
T 2d0i_A 245 VTEAIKQGKLKGYATDVFEKEPVRE---HELFKYEWETVLTPHYAGLALEAQEDVGFRAVE-----------------NL 304 (333)
T ss_dssp HHHHHHTTCBCEEEESCCSSSSCSC---CGGGGCTTTEEECCSCTTCCHHHHHHHHHHHHH-----------------HH
T ss_pred HHHHHHcCCceEEEecCCCCCCCCC---chHHcCCCCEEEcCccCCCcHHHHHHHHHHHHH-----------------HH
Confidence 4689999999999999999999764 4999999 9999999999999999999999999 59
Q ss_pred HhhccCCCCCCccccChhhHHhh
Q psy6351 80 IGLLSGRTSNGLNFINVNTYASE 102 (168)
Q Consensus 80 ~~~L~~~~~~~vn~VNa~~la~~ 102 (168)
..|++| +.+.|.||++.+++.
T Consensus 305 ~~~~~g--~~~~~~v~~~~~~~~ 325 (333)
T 2d0i_A 305 LKVLRG--EVPEDLVNKEVLEVR 325 (333)
T ss_dssp HHHHTT--CCCTTBSCTTHHHHS
T ss_pred HHHHcC--CCCcCccCHHHhhcc
Confidence 999997 578899999887743
No 23
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.60 E-value=1.1e-15 Score=130.84 Aligned_cols=73 Identities=32% Similarity=0.384 Sum_probs=67.2
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|++||++|+++||+||||+.||.+++ ||+++|||++|||+|+.|.|++.+++..+++ ++.
T Consensus 261 L~~aL~~g~i~ga~lDv~~~EP~~~~---~L~~~~nviltPH~~~~t~e~~~~~~~~~~~-----------------nl~ 320 (333)
T 3ba1_A 261 LVSALVEGRLGGAGLDVFEREPEVPE---KLFGLENVVLLPHVGSGTVETRKVMADLVVG-----------------NLE 320 (333)
T ss_dssp HHHHHHHTSSCEEEESCCTTTTCCCG---GGGGCTTEEECSSCTTCSHHHHHHHHHHHHH-----------------HHH
T ss_pred HHHHHHcCCCeEEEEecCCCCCCCcc---hhhcCCCEEECCcCCCCCHHHHHHHHHHHHH-----------------HHH
Confidence 57899999999999999999997654 9999999999999999999999999999999 599
Q ss_pred hhccCCCCCCccccC
Q psy6351 81 GLLSGRTSNGLNFIN 95 (168)
Q Consensus 81 ~~L~~~~~~~vn~VN 95 (168)
.|++| +.+.|.||
T Consensus 321 ~~~~g--~~~~~~Vn 333 (333)
T 3ba1_A 321 AHFSG--KPLLTPVV 333 (333)
T ss_dssp HHHHT--CCCSSBCC
T ss_pred HHHcC--CCCCCCCC
Confidence 99997 56788886
No 24
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.60 E-value=9.4e-16 Score=131.38 Aligned_cols=65 Identities=48% Similarity=0.801 Sum_probs=59.4
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|++||++|+|+||+||||+.||+.++ |||++||+++|||+|++|.|++.+++..+++ ++.
T Consensus 265 L~~aL~~g~i~gA~lDV~~~EP~~~~---~L~~~~nvilTPH~~~~t~e~~~~~~~~~~~-----------------nl~ 324 (335)
T 2g76_A 265 LLRALQSGQCAGAALDVFTEEPPRDR---ALVDHENVISCPHLGASTKEAQSRCGEEIAV-----------------QFV 324 (335)
T ss_dssp HHHHHHHTSEEEEEESCCSSSSCSCC---HHHHSTTEEECSSCTTCBHHHHHHHHHHHHH-----------------HHH
T ss_pred HHHHHHhCCccEEEEeecCCCCCCCc---hHHhCCCEEECCcCCCCCHHHHHHHHHHHHH-----------------HHH
Confidence 57899999999999999999996555 9999999999999999999999999999999 599
Q ss_pred hhccC
Q psy6351 81 GLLSG 85 (168)
Q Consensus 81 ~~L~~ 85 (168)
.|++|
T Consensus 325 ~~~~g 329 (335)
T 2g76_A 325 DMVKG 329 (335)
T ss_dssp HHC--
T ss_pred HHHcC
Confidence 99987
No 25
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.59 E-value=1e-15 Score=131.41 Aligned_cols=78 Identities=26% Similarity=0.241 Sum_probs=70.0
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|++||++|+|+|||+|||+.||..+ +||+.++||++|||+|+.|.|++.+++..+++ ++.
T Consensus 266 L~~aL~~~~i~gaglDv~~~EP~~~---~~L~~~~nviltPH~~~~t~e~~~~~~~~~~~-----------------ni~ 325 (348)
T 2w2k_A 266 LIAALKSGKLLSAGLDVHEFEPQVS---KELIEMKHVTLTTHIGGVAIETFHEFERLTMT-----------------NID 325 (348)
T ss_dssp HHHHHHTTSEEEEEESSCTTTTSCC---HHHHTSSSEEECCSCTTCSHHHHHHHHHHHHH-----------------HHH
T ss_pred HHHHHHhCCceEEEeccCCCCCCCC---chhhcCCCEEEcCcCCCCCHHHHHHHHHHHHH-----------------HHH
Confidence 5789999999999999999999544 49999999999999999999999999999999 599
Q ss_pred hhccCCCCCCccccChhhHH
Q psy6351 81 GLLSGRTSNGLNFINVNTYA 100 (168)
Q Consensus 81 ~~L~~~~~~~vn~VNa~~la 100 (168)
.|++| +.+.|.||.+.+.
T Consensus 326 ~~~~g--~~~~~~v~~~~~~ 343 (348)
T 2w2k_A 326 RFLLQ--GKPLLTPAGKVFA 343 (348)
T ss_dssp HHHHT--CCCCSSBCSCCCC
T ss_pred HHHcC--CCCcceecccccC
Confidence 99987 4688999987653
No 26
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.58 E-value=2.3e-15 Score=127.45 Aligned_cols=72 Identities=29% Similarity=0.457 Sum_probs=64.5
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|++||+ |+|+||+||||+.||.+.+ +|||+++|+++|||+|++|.+++.+++..+++ ++.
T Consensus 239 L~~aL~-g~i~ga~lDv~~~eP~~~~--~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~-----------------nl~ 298 (311)
T 2cuk_A 239 LVEALR-GHLFGAGLDVTDPEPLPPG--HPLYALPNAVITPHIGSAGRTTRERMAEVAVE-----------------NLL 298 (311)
T ss_dssp HHHHHT-TTSSEEEESSCSSSSCCTT--SGGGGCTTEEECCSCTTCBHHHHHHHHHHHHH-----------------HHH
T ss_pred HHHHHh-CcCCEEEEeeCCCCCCCCC--ChhhhCCCEEECCcCCCCCHHHHHHHHHHHHH-----------------HHH
Confidence 578999 9999999999999996543 59999999999999999999999999999999 599
Q ss_pred hhccCCCCCCcccc
Q psy6351 81 GLLSGRTSNGLNFI 94 (168)
Q Consensus 81 ~~L~~~~~~~vn~V 94 (168)
.|++| +.+.|.|
T Consensus 299 ~~~~g--~~~~~~v 310 (311)
T 2cuk_A 299 AVLEG--REPPNPV 310 (311)
T ss_dssp HHHTT--CCCSSBC
T ss_pred HHHcC--CCCCCcc
Confidence 99987 4566765
No 27
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.58 E-value=2.1e-15 Score=127.46 Aligned_cols=66 Identities=41% Similarity=0.570 Sum_probs=60.4
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|++||++|+|+||+||||+.||.+.+ +|||++||+++|||+|++|.+++.+++..+++ ++.
T Consensus 242 L~~aL~~g~i~ga~lDv~~~eP~~~~--~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~-----------------nl~ 302 (307)
T 1wwk_A 242 LVKALKEGWIAGAGLDVFEEEPLPKD--HPLTKFDNVVLTPHIGASTVEAQERAGVEVAE-----------------KVV 302 (307)
T ss_dssp HHHHHHHTSSSEEEESCCSSSSCCTT--CGGGGCTTEEECSSCTTCBHHHHHHHHHHHHH-----------------HHH
T ss_pred HHHHHHhCCCcEEEEecCCCCCCCCC--ChHHhCCCEEECCccccCcHHHHHHHHHHHHH-----------------HHH
Confidence 57899999999999999999998543 59999999999999999999999999999999 488
Q ss_pred hhccC
Q psy6351 81 GLLSG 85 (168)
Q Consensus 81 ~~L~~ 85 (168)
.|++|
T Consensus 303 ~~~~g 307 (307)
T 1wwk_A 303 KILKG 307 (307)
T ss_dssp HHHTC
T ss_pred HHHcC
Confidence 88864
No 28
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.58 E-value=2.1e-15 Score=128.56 Aligned_cols=78 Identities=29% Similarity=0.372 Sum_probs=70.3
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|++||++|+|+|||+|||+.||+.+ +||+.++||++|||+|+.|.++..+++..+++ ++.
T Consensus 250 L~~aL~~~~i~ga~lDv~~~EP~~~---~~L~~~~~vi~tPh~~~~t~~~~~~~~~~~~~-----------------n~~ 309 (334)
T 2dbq_A 250 LVKALKEGWIAGAGLDVFEEEPYYN---EELFKLDNVVLTPHIGSASFGAREGMAELVAK-----------------NLI 309 (334)
T ss_dssp HHHHHHHTSSSEEEESCCSSSSCCC---HHHHHCTTEEECSSCTTCSHHHHHHHHHHHHH-----------------HHH
T ss_pred HHHHHHhCCeeEEEecCCCCCCCCC---chhhcCCCEEECCccCCCcHHHHHHHHHHHHH-----------------HHH
Confidence 5689999999999999999999433 59999999999999999999999999999999 599
Q ss_pred hhccCCCCCCccccChhhHH
Q psy6351 81 GLLSGRTSNGLNFINVNTYA 100 (168)
Q Consensus 81 ~~L~~~~~~~vn~VNa~~la 100 (168)
.|++| +.+.|.||+..+.
T Consensus 310 ~~~~g--~~~~~~v~~~~~~ 327 (334)
T 2dbq_A 310 AFKRG--EIPPTLVNREVIK 327 (334)
T ss_dssp HHHTT--CCCTTBSCTTHHH
T ss_pred HHHcC--CCCccccCHHHHh
Confidence 99997 5788999987655
No 29
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.56 E-value=4.7e-15 Score=127.56 Aligned_cols=77 Identities=30% Similarity=0.361 Sum_probs=65.9
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCC-CCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPK-SEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQ 79 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~-~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l 79 (168)
|++||++|+|+||++|||+.||.+ .+ +||+.+||+++|||+|+.|.+++.++.+.+++ ++
T Consensus 269 L~~aL~~g~i~gA~lDV~~~EP~~~~~--~~L~~~~nvi~tPHia~~t~~~~~~~~~~~~~-----------------ni 329 (347)
T 1mx3_A 269 LAQALKEGRIRGAALDVHESEPFSFSQ--GPLKDAPNLICTPHAAWYSEQASIEMREEAAR-----------------EI 329 (347)
T ss_dssp HHHHHHHTSEEEEEESCCSSSSCCTTS--STTTTCSSEEECSSCTTCCHHHHHHHHHHHHH-----------------HH
T ss_pred HHHHHHhCCCcEEEEeecccCCCCCCC--chHHhCCCEEEEchHHHHHHHHHHHHHHHHHH-----------------HH
Confidence 578999999999999999999975 22 59999999999999999999999999999999 59
Q ss_pred HhhccCCC-CCCccccCh
Q psy6351 80 IGLLSGRT-SNGLNFINV 96 (168)
Q Consensus 80 ~~~L~~~~-~~~vn~VNa 96 (168)
..|++|.. ....|.||+
T Consensus 330 ~~~~~g~~~~~l~~~v~~ 347 (347)
T 1mx3_A 330 RRAITGRIPDSLKNCVNK 347 (347)
T ss_dssp HHHHHSCTTTTCSSBCC-
T ss_pred HHHHcCCCCcccCCCCCC
Confidence 99999731 123477774
No 30
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.54 E-value=7.7e-15 Score=124.61 Aligned_cols=64 Identities=27% Similarity=0.386 Sum_probs=59.2
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|++||++|+|+||+||||+.||+.+ +|||+++|+++|||+|++|.|++.+++..+ + ++.
T Consensus 248 L~~aL~~g~i~gA~lDv~~~eP~~~---~~L~~~~nviltPH~~~~t~~~~~~~~~~~-~-----------------nl~ 306 (320)
T 1gdh_A 248 VVAALEAGRLAYAGFDVFAGEPNIN---EGYYDLPNTFLFPHIGSAATQAREDMAHQA-N-----------------DLI 306 (320)
T ss_dssp HHHHHHHTSEEEEEESCCTTTTSCC---TTGGGCTTEEECSSCTTCBHHHHHHHHHHH-H-----------------HHH
T ss_pred HHHHHHhCCCcEEEEeCCCCCCCCC---ChhhhCCCEEECCcCCcCcHHHHHHHHHHH-H-----------------HHH
Confidence 5789999999999999999999444 499999999999999999999999999999 8 599
Q ss_pred hhccC
Q psy6351 81 GLLSG 85 (168)
Q Consensus 81 ~~L~~ 85 (168)
.|++|
T Consensus 307 ~~~~g 311 (320)
T 1gdh_A 307 DALFG 311 (320)
T ss_dssp HHHHT
T ss_pred HHHcC
Confidence 99987
No 31
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.54 E-value=3.6e-15 Score=126.29 Aligned_cols=68 Identities=40% Similarity=0.545 Sum_probs=61.0
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|++||++|+|+||+||||+.||.+++...|||++||+++|||+|++|.+++.+++..+++ ++.
T Consensus 242 L~~aL~~g~i~ga~lDv~~~eP~~~~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~~~-----------------n~~ 304 (313)
T 2ekl_A 242 LLDYIKKGKVYAYATDVFWNEPPKEEWELELLKHERVIVTTHIGAQTKEAQKRVAEMTTQ-----------------NLL 304 (313)
T ss_dssp HHHHHHTTCEEEEEESCCSSSSCCSHHHHHHHHSTTEEECCSCTTCSHHHHHHHHHHHHH-----------------HHH
T ss_pred HHHHHHcCCCcEEEEecCCCCCCCCcccchHhhCCCEEECCccCcCcHHHHHHHHHHHHH-----------------HHH
Confidence 578999999999999999999987321119999999999999999999999999999999 599
Q ss_pred hhccC
Q psy6351 81 GLLSG 85 (168)
Q Consensus 81 ~~L~~ 85 (168)
.|++|
T Consensus 305 ~~~~g 309 (313)
T 2ekl_A 305 NAMKE 309 (313)
T ss_dssp HHHHH
T ss_pred HHHcC
Confidence 99986
No 32
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.52 E-value=1.5e-14 Score=122.94 Aligned_cols=74 Identities=20% Similarity=0.292 Sum_probs=67.0
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|.++|++|+++||++|||+.||.+.+ +||++++||++|||+|+.|.+++.+++..+++ ++.
T Consensus 256 L~~aL~~~~i~ga~lDv~~~epl~~~--~~l~~~~nvi~tPh~~~~t~~~~~~~~~~~~~-----------------n~~ 316 (330)
T 2gcg_A 256 LYQALASGKIAAAGLDVTSPEPLPTN--HPLLTLKNCVILPHIGSATHRTRNTMSLLAAN-----------------NLL 316 (330)
T ss_dssp HHHHHHHTSSSEEEESCCSSSSCCTT--CGGGGCTTEEECCSCTTCBHHHHHHHHHHHHH-----------------HHH
T ss_pred HHHHHHcCCccEEEeCCCCCCCCCCC--ChhhcCCCEEECCCCCCCcHHHHHHHHHHHHH-----------------HHH
Confidence 46899999999999999999996644 59999999999999999999999999999999 599
Q ss_pred hhccCCCCCCccccC
Q psy6351 81 GLLSGRTSNGLNFIN 95 (168)
Q Consensus 81 ~~L~~~~~~~vn~VN 95 (168)
.|++| +.+.|.||
T Consensus 317 ~~~~g--~~~~~~v~ 329 (330)
T 2gcg_A 317 AGLRG--EPMPSELK 329 (330)
T ss_dssp HHHHT--CCCTTEEC
T ss_pred HHHcC--CCCCCCCC
Confidence 99997 46688887
No 33
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.51 E-value=5.7e-15 Score=124.41 Aligned_cols=64 Identities=17% Similarity=0.096 Sum_probs=58.9
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCC-cchHHHHHHHHHHHHHHhhccccccccccchHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLG-ASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQ 79 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig-~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l 79 (168)
|++||++|+++||+||||+.||+ + |||++||+++|||+| ++|.|+..++...+++ ||
T Consensus 219 L~~aL~~g~i~ga~lDV~~~EP~--~---pL~~~~nvilTPHiag~~t~e~~~~~~~~~~~-----------------ni 276 (290)
T 3gvx_A 219 MIGFLKERSDVWYLSDVWWNEPE--I---TETNLRNAILSPHVAGGMSGEIMDIAIQLAFE-----------------NV 276 (290)
T ss_dssp HHHHHHHCTTCEEEESCCTTTTS--C---CSCCCSSEEECCSCSSCBTTBCCHHHHHHHHH-----------------HH
T ss_pred hhhhhhhccceEEeeccccCCcc--c---chhhhhhhhcCccccCCccchHHHHHHHHHHH-----------------HH
Confidence 57899999999999999999997 4 999999999999999 9999999999999999 59
Q ss_pred HhhccCC
Q psy6351 80 IGLLSGR 86 (168)
Q Consensus 80 ~~~L~~~ 86 (168)
..|++|.
T Consensus 277 ~~~~~~~ 283 (290)
T 3gvx_A 277 RNFFEGE 283 (290)
T ss_dssp HHHTC--
T ss_pred HhhhcCC
Confidence 9999874
No 34
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=99.49 E-value=2.5e-14 Score=124.63 Aligned_cols=64 Identities=27% Similarity=0.268 Sum_probs=58.4
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHHhhccccccccccchHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFYSLLGAELKNKQFLTTPVQI 80 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~~~~g~~~~~~~~lt~a~l~ 80 (168)
|++||++|+|+||+||||++||++++ +|+. +|+++|||+||+|.|++.++..+++++ +.
T Consensus 217 L~~aL~~g~i~~A~LDV~~~EP~~~~---~l~~-~nvi~TPHiag~t~e~~~~~~~~~~~n-----------------l~ 275 (380)
T 2o4c_A 217 LRRLLEGGADLEVALDVWEGEPQADP---ELAA-RCLIATPHIAGYSLEGKLRGTAQIYQA-----------------YC 275 (380)
T ss_dssp HHHHHHTTCCEEEEESCCTTTTSCCH---HHHT-TCSEECSSCTTCCHHHHHHHHHHHHHH-----------------HH
T ss_pred HHHHHHhCCCceEEeeeeccCCCCch---hhcc-CCEEEccccCcCCHHHHHHHHHHHHHH-----------------HH
Confidence 57899999999999999999998765 8887 499999999999999999999999994 88
Q ss_pred hhccC
Q psy6351 81 GLLSG 85 (168)
Q Consensus 81 ~~L~~ 85 (168)
.|+++
T Consensus 276 ~~l~g 280 (380)
T 2o4c_A 276 AWRGI 280 (380)
T ss_dssp HHHTC
T ss_pred HHHcC
Confidence 88876
No 35
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=99.49 E-value=1.5e-14 Score=126.13 Aligned_cols=57 Identities=26% Similarity=0.275 Sum_probs=53.1
Q ss_pred CHHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCCCcchHHHHHHHHHHHHHH
Q psy6351 1 MKSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHLGASTKEAQIRQDKQSIFY 61 (168)
Q Consensus 1 L~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~~ 61 (168)
|++||++|+++||+||||++||++++ +|+.++ +++|||+||+|.|++.++..+++++
T Consensus 220 L~~aL~~g~i~gA~LDV~e~EP~~~~---~L~~~~-~i~TPHiag~t~e~~~~~~~~~~~~ 276 (381)
T 3oet_A 220 LLARLNAGQPLSVVLDVWEGEPDLNV---ALLEAV-DIGTSHIAGYTLEGKARGTTQVFEA 276 (381)
T ss_dssp HHHHHHTTCCEEEEESCCTTTTSCCH---HHHHHS-SEECSSCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCeEEEeeccccCCCCcc---hhhhCC-EEECCccCcCcHHHHHHHHHHHHHH
Confidence 57899999999999999999998866 899875 8999999999999999999999995
No 36
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=97.78 E-value=1.2e-06 Score=78.51 Aligned_cols=67 Identities=7% Similarity=-0.055 Sum_probs=51.7
Q ss_pred HHHhcCCeeEEEeecCCCCCCCCCCChhhccC--CceEEccCCC-cchHH-HHHHHHHHHHHHhhccccccccccchHHH
Q psy6351 3 SELRCGHCGGAALDVFCEEPPKSEQTFELIKH--PKVIVTPHLG-ASTKE-AQIRQDKQSIFYSLLGAELKNKQFLTTPV 78 (168)
Q Consensus 3 ~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~--~nvilTPHig-~~T~e-a~~~~~~~~~~~~~~g~~~~~~~~lt~a~ 78 (168)
+||++|+|+ +++||| |++++ +||+.+ ||+++| |+| |++.+ ++.+++..+++ +
T Consensus 376 ~AL~~g~I~-~~~Dv~---plp~~--~pL~~l~~~nvv~t-H~atg~~~~~~~~~~a~~~~~-----------------n 431 (494)
T 3d64_A 376 RQYQWENIK-PQVDHI---IFPDG--KRVILLAEGRLVNL-GCATGHPSFVMSNSFTNQTLA-----------------Q 431 (494)
T ss_dssp TTSEEEEEE-TTEEEE---ECTTS--CEEEEEGGGSBHHH-HTSCCSCHHHHHHHHHHHHHH-----------------H
T ss_pred HhhhcCccc-eeEEEE---ECCCC--CchhhcCCCCEEEE-eCcCCCCHHHHHHHHHHHHHH-----------------H
Confidence 789999998 666665 65543 599998 999999 999 66644 78889999999 4
Q ss_pred HHhhccCCCCCCccccC
Q psy6351 79 QIGLLSGRTSNGLNFIN 95 (168)
Q Consensus 79 l~~~L~~~~~~~vn~VN 95 (168)
+..|+++ +...|.|+
T Consensus 432 i~~~~~g--~~~~n~V~ 446 (494)
T 3d64_A 432 IELFTRG--GEYANKVY 446 (494)
T ss_dssp HHHHHHG--GGSCSSEE
T ss_pred HHHHHcC--CCCCCcee
Confidence 8899886 34556663
No 37
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=97.71 E-value=2.2e-06 Score=76.60 Aligned_cols=58 Identities=5% Similarity=-0.088 Sum_probs=48.0
Q ss_pred HHhcCCeeEEEeecCCCCCCCCCCChhhccC--CceEEccCCC-cchHH-HHHHHHHHHHHHhhccccccccccchHHHH
Q psy6351 4 ELRCGHCGGAALDVFCEEPPKSEQTFELIKH--PKVIVTPHLG-ASTKE-AQIRQDKQSIFYSLLGAELKNKQFLTTPVQ 79 (168)
Q Consensus 4 AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~--~nvilTPHig-~~T~e-a~~~~~~~~~~~~~~g~~~~~~~~lt~a~l 79 (168)
||++|+|+ +++|||+. +++ +||+.+ ||+++| |+| +++.+ ++.+++..+++ ++
T Consensus 360 AL~~g~I~-a~lDv~pl---p~~--~~l~~l~~~nvv~t-H~atghp~e~~~~s~a~~~~~-----------------ni 415 (479)
T 1v8b_A 360 GIHIENVK-PQVDRITL---PNG--NKIIVLARGRLLNL-GCATGHPAFVMSFSFCNQTFA-----------------QL 415 (479)
T ss_dssp TCEEEEEE-TTEEEEEC---TTS--CEEEEEGGGSBHHH-HSSCCSCHHHHHHHHHHHHHH-----------------HH
T ss_pred cceeeeEe-eeEEEEEC---CCC--CeeeEecCCCEEEE-eccCCCCchhHHHHHHHHHHH-----------------HH
Confidence 88999999 99999843 222 489988 999999 999 67766 78888889998 48
Q ss_pred HhhccC
Q psy6351 80 IGLLSG 85 (168)
Q Consensus 80 ~~~L~~ 85 (168)
..|++|
T Consensus 416 ~~~~~g 421 (479)
T 1v8b_A 416 DLWQNK 421 (479)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 899886
No 38
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=97.04 E-value=6.7e-05 Score=65.91 Aligned_cols=53 Identities=19% Similarity=0.286 Sum_probs=41.9
Q ss_pred HHHHhcCCeeEEEeecCCCCCCCCCCChhhccCCceEEccCC----C-----------------cchHHHHHHHHHHHHH
Q psy6351 2 KSELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVIVTPHL----G-----------------ASTKEAQIRQDKQSIF 60 (168)
Q Consensus 2 ~~AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvilTPHi----g-----------------~~T~ea~~~~~~~~~~ 60 (168)
+++|++|+|+++| +||.+.+ .++|+.++||++|||+ | |+++|.+.++...+.+
T Consensus 306 ~~aL~~~~I~~aA-----neP~t~~-a~~ll~~~~V~itPhiaaNaGGvt~s~~E~~qn~~~~~w~~~ev~~~l~~~m~~ 379 (419)
T 1gtm_A 306 ADNIKAKIVAEVA-----NGPVTPE-ADEILFEKGILQIPDFLCNAGGVTVSYFEWVQNITGYYWTIEEVRERLDKKMTK 379 (419)
T ss_dssp GGGCCCSEEECCS-----SSCBCHH-HHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_pred HHHhcCCEEEEee-----CCCCCcc-hHHHHhcCCEEEECchhhhCCcceeeeehhhhcccccccCHHHHHHHHHHHHHH
Confidence 4689999999998 8997521 2489999999999999 6 5567777777776666
No 39
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=88.72 E-value=0.047 Score=48.78 Aligned_cols=51 Identities=10% Similarity=0.092 Sum_probs=35.2
Q ss_pred HHhcCCeeEEEeecCCCCCCCCCCChhhccCCceE----EccCCCcchHHHHHHHHHHHHH
Q psy6351 4 ELRCGHCGGAALDVFCEEPPKSEQTFELIKHPKVI----VTPHLGASTKEAQIRQDKQSIF 60 (168)
Q Consensus 4 AL~~G~i~gAaLDVf~~EP~~~~~~~pL~~~~nvi----lTPHig~~T~ea~~~~~~~~~~ 60 (168)
+|++++|. +++|+|+.++.... -.|+..+|++ +|||+++.+.++. ...+.+
T Consensus 376 aL~~~~I~-~~ldv~~~~~~~~~--l~LL~~grlvnL~~~TPH~a~~~~~s~---~~qa~~ 430 (494)
T 3ce6_A 376 GATRVNVK-PQVDLWTFGDTGRS--IIVLSEGRLLNLGNATGHPSFVMSNSF---ANQTIA 430 (494)
T ss_dssp TCEEEEEE-TTEEEEECTTTCCE--EEEEGGGSCHHHHHSCCSCHHHHHHHH---HHHHHH
T ss_pred hhccceEE-EEEEEeecCCcchH--HHHHhCCCEEeccCCCCCccccchHHH---HHHHHH
Confidence 55667787 67899876332221 1377788898 9999999988764 455666
No 40
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.86 E-value=0.36 Score=41.01 Aligned_cols=31 Identities=13% Similarity=0.206 Sum_probs=24.6
Q ss_pred cCCC-CCCCCCCChhhccCCceE--EccCCCcchHH
Q psy6351 17 VFCE-EPPKSEQTFELIKHPKVI--VTPHLGASTKE 49 (168)
Q Consensus 17 Vf~~-EP~~~~~~~pL~~~~nvi--lTPHig~~T~e 49 (168)
||+. ||.+.+ +|++..+|++ +|||+++.+..
T Consensus 274 v~e~~ep~~~~--~~~~~~~~v~i~~~phl~~~~~~ 307 (377)
T 2vhw_A 274 CFEGSRPTTYD--HPTFAVHDTLFYCVANMPASVPK 307 (377)
T ss_dssp SBTTCCCBCSS--SCEEEETTEEEECBTTGGGGSHH
T ss_pred ccccccCCCCC--CCEEEECCEEEEecCCcchhhHH
Confidence 4555 776533 4999999998 99999999876
No 41
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=70.93 E-value=3.4 Score=35.15 Aligned_cols=35 Identities=20% Similarity=0.185 Sum_probs=28.5
Q ss_pred EEeecCCCCCCC-CCCChhhccCCceEE--ccCCCcchHHHHH
Q psy6351 13 AALDVFCEEPPK-SEQTFELIKHPKVIV--TPHLGASTKEAQI 52 (168)
Q Consensus 13 AaLDVf~~EP~~-~~~~~pL~~~~nvil--TPHig~~T~ea~~ 52 (168)
..+|+.. |.. ++ +++++|||++ +||+++.+.+++.
T Consensus 261 v~vdia~--P~~i~~---~l~~l~~v~l~d~d~l~~~~~~~~~ 298 (404)
T 1gpj_A 261 LIIDIAN--PRDVEE---GVENIEDVEVRTIDDLRVIARENLE 298 (404)
T ss_dssp EEEECCS--SCSBCT---TGGGSTTEEEEEHHHHHHHHHHHHH
T ss_pred EEEEccC--CCCCCc---cccccCCeEEEeHhhHHHHHHHHHH
Confidence 5678865 653 44 8999999999 9999999998765
No 42
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=63.18 E-value=1.6 Score=36.68 Aligned_cols=44 Identities=11% Similarity=0.007 Sum_probs=22.8
Q ss_pred EeecCCCCCCCCCCChhhccCCceE---------EccCCCcc--hHHHHHHHHHHHHHH
Q psy6351 14 ALDVFCEEPPKSEQTFELIKHPKVI---------VTPHLGAS--TKEAQIRQDKQSIFY 61 (168)
Q Consensus 14 aLDVf~~EP~~~~~~~pL~~~~nvi---------lTPHig~~--T~ea~~~~~~~~~~~ 61 (168)
++||+ ||.+-+ +|++..++++ .+||.|+. +.+....+...+.++
T Consensus 272 ~~d~~--ep~~~~--~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~l~~l~~~g 326 (369)
T 2eez_A 272 CVETI--RPTTHA--EPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPYVLKLAEKG 326 (369)
T ss_dssp ------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcc--cCCCCC--CCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHHHHHHHhcC
Confidence 38887 664422 4889899999 88998875 456667777776663
No 43
>3f5r_A FACT complex subunit POB3; APC7736, FACT complex (SPT16P-POB3P), saccharomyces cerevisi structural genomics, PSI-2; 1.70A {Saccharomyces cerevisiae}
Probab=27.39 E-value=34 Score=26.72 Aligned_cols=24 Identities=17% Similarity=0.313 Sum_probs=0.0
Q ss_pred eccccccEEEEeecCCCCCccccc
Q psy6351 141 TELLSYSLILVLQEDTAQWSIPYL 164 (168)
Q Consensus 141 ~~~~eG~~li~r~~D~pg~~~~~~ 164 (168)
.+..+|+.|.|...++|-+.|||-
T Consensus 136 ~~~f~g~~L~F~v~~KpaFEIPls 159 (191)
T 3f5r_A 136 KTDLARNEMVFALNGKPTFEIPYA 159 (191)
T ss_dssp ------------------------
T ss_pred ecEEcCCEEEEEeCCeeEEEecHH
Confidence 677899999999999999999983
Done!