BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6353
(136 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q28GD4|ELAV2_XENTR ELAV-like protein 2 OS=Xenopus tropicalis GN=elavl2 PE=2 SV=2
Length = 375
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 75/86 (87%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
T QSLGYGFVNY P+DAEKAINTLNGLRLQ KTIKVSYARPSS SI+ ANLYVSGLPK
Sbjct: 104 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKT 163
Query: 92 MSQQELESLFSPYGRIITSRILCDNL 117
M+Q+ELE LFS YGRIITSRIL D +
Sbjct: 164 MTQKELEQLFSQYGRIITSRILVDQV 189
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 82 NLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENGKY 124
NL V+ LP++M+Q+EL+SLF G I + +++ D + ++ Y
Sbjct: 68 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 110
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV ++A AI +LNG RL ++ ++VS+
Sbjct: 328 NTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 367
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKT--IKVSYARPSSESIKG---ANLYVS 86
T S G GF+ + + +AE+AI LNG + T I V +A S+ + + LY S
Sbjct: 190 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKVNHTILSQLYQS 249
Query: 87 G---LPKHMSQQELE-SLFSP 103
P ++QQ S FSP
Sbjct: 250 PNRRYPGPLAQQAQRFSRFSP 270
>sp|P16914|ELAV_DROME Protein elav OS=Drosophila melanogaster GN=elav PE=2 SV=1
Length = 483
Score = 142 bits (358), Expect = 6e-34, Method: Composition-based stats.
Identities = 66/83 (79%), Positives = 77/83 (92%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPK 90
S QSLGYGFVNY RP+DAE+A+N LNGLRLQNKTIKVS+ARPSS++IKGANLYVSGLPK
Sbjct: 198 SKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPK 257
Query: 91 HMSQQELESLFSPYGRIITSRIL 113
M+QQELE++F+P+G IITSRIL
Sbjct: 258 TMTQQELEAIFAPFGAIITSRIL 280
Score = 35.4 bits (80), Expect = 0.12, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T Q GYGFV+ ++A AI LNG + N+ ++VS+
Sbjct: 438 TTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSF 477
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 82 NLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
NL V+ LP+ M++ E+ SLFS G I + +++ D
Sbjct: 150 NLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRD 183
>sp|P23241|ELAV_DROVI Protein elav OS=Drosophila virilis GN=elav PE=3 SV=1
Length = 519
Score = 142 bits (358), Expect = 7e-34, Method: Composition-based stats.
Identities = 66/83 (79%), Positives = 77/83 (92%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPK 90
S QSLGYGFVNY RP+DAE+A+N LNGLRLQNKTIKVS+ARPSS++IKGANLYVSGLPK
Sbjct: 234 SKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPK 293
Query: 91 HMSQQELESLFSPYGRIITSRIL 113
M+QQELE++F+P+G IITSRIL
Sbjct: 294 TMTQQELEAIFAPFGAIITSRIL 316
Score = 35.4 bits (80), Expect = 0.12, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T Q GYGFV+ ++A AI LNG + N+ ++VS+
Sbjct: 474 TTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSF 513
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 82 NLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
NL V+ LP+ M++ E+ SLFS G I + +++ D
Sbjct: 186 NLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRD 219
>sp|Q91903|ELAV2_XENLA ELAV-like protein 2 OS=Xenopus laevis GN=elavl2 PE=1 SV=2
Length = 389
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 70/88 (79%), Positives = 76/88 (86%)
Query: 30 ISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLP 89
I+ QSLGYGFVNY P+DAEKAINTLNGLRLQ KTIKVSYARPSS SI+ ANLYVSGLP
Sbjct: 102 ITEGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLP 161
Query: 90 KHMSQQELESLFSPYGRIITSRILCDNL 117
K M+Q+ELE LFS YGRIITSRIL D +
Sbjct: 162 KTMTQKELEQLFSQYGRIITSRILVDQV 189
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 26/36 (72%)
Query: 82 NLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNL 117
NL V+ LP++M+Q+EL+SLF G I + +++ D +
Sbjct: 67 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKI 102
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV ++A AI +LNG RL ++ ++VS+
Sbjct: 342 NTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 381
>sp|Q60899|ELAV2_MOUSE ELAV-like protein 2 OS=Mus musculus GN=Elavl2 PE=2 SV=1
Length = 360
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 75/86 (87%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
T QSLGYGFVNY P+DAEKAINTLNGLRLQ KTIKVSYARPSS SI+ ANLYVSGLPK
Sbjct: 76 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKT 135
Query: 92 MSQQELESLFSPYGRIITSRILCDNL 117
M+Q+ELE LFS YGRIITSRIL D +
Sbjct: 136 MTQKELEQLFSQYGRIITSRILVDQV 161
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 NTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRIL 113
NT NG N ++E K NL V+ LP++M+Q+EL+SLF G I + +++
Sbjct: 13 NTANGPTTVNNNCSSPVDSGNTEDSK-TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLV 71
Query: 114 CDNLATENGKY 124
D + ++ Y
Sbjct: 72 RDKITGQSLGY 82
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV ++A AI +LNG RL ++ ++VS+
Sbjct: 313 NTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 352
>sp|Q5R9Z6|ELAV2_PONAB ELAV-like protein 2 OS=Pongo abelii GN=ELAVL2 PE=2 SV=1
Length = 359
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 75/86 (87%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
T QSLGYGFVNY P+DAEKAINTLNGLRLQ KTIKVSYARPSS SI+ ANLYVSGLPK
Sbjct: 76 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKT 135
Query: 92 MSQQELESLFSPYGRIITSRILCDNL 117
M+Q+ELE LFS YGRIITSRIL D +
Sbjct: 136 MTQKELEQLFSQYGRIITSRILVDQV 161
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 NTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRIL 113
NT NG N ++E K NL V+ LP++M+Q+EL+SLF G I + +++
Sbjct: 13 NTANGPTTINNNCSSPVDSGNTEDSK-TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLV 71
Query: 114 CDNLATENGKY 124
D + ++ Y
Sbjct: 72 RDKITGQSLGY 82
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV ++A AI +LNG RL ++ ++VS+
Sbjct: 312 NTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 351
>sp|Q12926|ELAV2_HUMAN ELAV-like protein 2 OS=Homo sapiens GN=ELAVL2 PE=1 SV=2
Length = 359
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 75/86 (87%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
T QSLGYGFVNY P+DAEKAINTLNGLRLQ KTIKVSYARPSS SI+ ANLYVSGLPK
Sbjct: 76 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKT 135
Query: 92 MSQQELESLFSPYGRIITSRILCDNL 117
M+Q+ELE LFS YGRIITSRIL D +
Sbjct: 136 MTQKELEQLFSQYGRIITSRILVDQV 161
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 NTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRIL 113
NT NG N ++E K NL V+ LP++M+Q+EL+SLF G I + +++
Sbjct: 13 NTANGPTTINNNCSSPVDSGNTEDSK-TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLV 71
Query: 114 CDNLATENGKY 124
D + ++ Y
Sbjct: 72 RDKITGQSLGY 82
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV ++A AI +LNG RL ++ ++VS+
Sbjct: 312 NTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 351
>sp|Q8CH84|ELAV2_RAT ELAV-like protein 2 OS=Rattus norvegicus GN=Elavl2 PE=2 SV=1
Length = 359
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 75/86 (87%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
T QSLGYGFVNY P+DAEKAINTLNGLRLQ KTIKVSYARPSS SI+ ANLYVSGLPK
Sbjct: 76 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKT 135
Query: 92 MSQQELESLFSPYGRIITSRILCDNL 117
M+Q+ELE LFS YGRIITSRIL D +
Sbjct: 136 MTQKELEQLFSQYGRIITSRILVDQV 161
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 54 NTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRIL 113
NT NG N ++E K NL + LP++M+Q+EL+SLF G I + +++
Sbjct: 13 NTANGPTTVNNNCSSPVDSGNTEDSK-TNLIDNYLPQNMTQEELKSLFGSIGEIESCKLV 71
Query: 114 CDNLATENGKY 124
D + ++ Y
Sbjct: 72 RDKITGQSLGY 82
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV ++A AI +LNG RL ++ ++VS+
Sbjct: 312 NTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 351
>sp|P26378|ELAV4_HUMAN ELAV-like protein 4 OS=Homo sapiens GN=ELAVL4 PE=1 SV=2
Length = 380
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 75/87 (86%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
T QSLGYGFVNY P+DAEKAINTLNGLRLQ KTIKVSYARPSS SI+ ANLYVSGLPK
Sbjct: 83 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKT 142
Query: 92 MSQQELESLFSPYGRIITSRILCDNLA 118
M+Q+ELE LFS YGRIITSRIL D +
Sbjct: 143 MTQKELEQLFSQYGRIITSRILVDQVT 169
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 54 NTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRIL 113
NT NG N+ ++ NL V+ LP++M+Q+E SLF G I + +++
Sbjct: 19 NTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLV 78
Query: 114 CDNLATENGKY 124
D + ++ Y
Sbjct: 79 RDKITGQSLGY 89
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV ++A AI +LNG RL ++ ++VS+
Sbjct: 333 NTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 372
>sp|Q61701|ELAV4_MOUSE ELAV-like protein 4 OS=Mus musculus GN=Elavl4 PE=1 SV=1
Length = 385
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 75/86 (87%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
T QSLGYGFVNY P+DAEKAINTLNGLRLQ KTIKVSYARPSS SI+ ANLYVSGLPK
Sbjct: 88 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKT 147
Query: 92 MSQQELESLFSPYGRIITSRILCDNL 117
M+Q+ELE LFS YGRIITSRIL D +
Sbjct: 148 MTQKELEQLFSQYGRIITSRILVDQV 173
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 54 NTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRIL 113
NT NG N+ ++ NL V+ LP++M+Q+E SLF G I + +++
Sbjct: 24 NTSNGPSSNNRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLV 83
Query: 114 CDNLATENGKY 124
D + ++ Y
Sbjct: 84 RDKITGQSLGY 94
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV ++A AI +LNG RL ++ ++VS+
Sbjct: 338 NTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 377
>sp|O09032|ELAV4_RAT ELAV-like protein 4 OS=Rattus norvegicus GN=Elavl4 PE=1 SV=1
Length = 373
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 75/86 (87%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
T QSLGYGFVNY P+DAEKAINTLNGLRLQ KTIKVSYARPSS SI+ ANLYVSGLPK
Sbjct: 76 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKT 135
Query: 92 MSQQELESLFSPYGRIITSRILCDNL 117
M+Q+ELE LFS YGRIITSRIL D +
Sbjct: 136 MTQKELEQLFSQYGRIITSRILVDQV 161
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 54 NTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRIL 113
NT NG N+ ++ NL V+ LP++M+Q+E SLF G I + +++
Sbjct: 12 NTSNGPSSNNRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLV 71
Query: 114 CDNLATENGKY 124
D + ++ Y
Sbjct: 72 RDKITGQSLGY 82
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV ++A AI +LNG RL ++ ++VS+
Sbjct: 326 NTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 365
>sp|Q14576|ELAV3_HUMAN ELAV-like protein 3 OS=Homo sapiens GN=ELAVL3 PE=1 SV=3
Length = 367
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/98 (72%), Positives = 78/98 (79%), Gaps = 2/98 (2%)
Query: 22 DAEICVFLIS--TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIK 79
D E C + T QSLGYGFVNY P DA+KAINTLNGL+LQ KTIKVSYARPSS SI+
Sbjct: 64 DIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIR 123
Query: 80 GANLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNL 117
ANLYVSGLPK MSQ+E+E LFS YGRIITSRIL D +
Sbjct: 124 DANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQV 161
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV ++A AI +LNG RL + ++VS+
Sbjct: 320 TTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSF 359
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 82 NLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENGKY 124
NL V+ LP++M+Q E +SLF G I + +++ D + ++ Y
Sbjct: 40 NLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGY 82
>sp|Q60900|ELAV3_MOUSE ELAV-like protein 3 OS=Mus musculus GN=Elavl3 PE=1 SV=1
Length = 367
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/96 (73%), Positives = 77/96 (80%), Gaps = 2/96 (2%)
Query: 22 DAEICVFLIS--TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIK 79
D E C + T QSLGYGFVNY P DA+KAINTLNGL+LQ KTIKVSYARPSS SI+
Sbjct: 64 DIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIR 123
Query: 80 GANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
ANLYVSGLPK MSQ+E+E LFS YGRIITSRIL D
Sbjct: 124 DANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLD 159
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV ++A AI +LNG RL + ++VS+
Sbjct: 320 TTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSF 359
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 82 NLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENGKY 124
NL V+ LP++M+Q E +SLF G I + +++ D + ++ Y
Sbjct: 40 NLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGY 82
>sp|Q7SZT7|ELAV4_XENLA ELAV-like protein 4 OS=Xenopus laevis GN=elavl4 PE=2 SV=1
Length = 400
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/90 (76%), Positives = 75/90 (83%)
Query: 29 LISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGL 88
+ QSLGYGFVNY P+DAEKAINTLNGLRLQ KTIKVSYARPSS SI+ ANLYVSGL
Sbjct: 114 IFGKGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGL 173
Query: 89 PKHMSQQELESLFSPYGRIITSRILCDNLA 118
PK M+Q+ELE LFS YGRIITSRIL D +
Sbjct: 174 PKTMTQKELEQLFSQYGRIITSRILVDQVT 203
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 54 NTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRIL 113
NT NG ++ ++ NL V+ LP++M+Q+E SLF G I + +++
Sbjct: 24 NTSNGPSSNSRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLV 83
Query: 114 CDNLA 118
D +
Sbjct: 84 RDKIT 88
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV ++A AI +LNG RL ++ ++VS+
Sbjct: 353 NTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 392
>sp|A4QNI8|ELAV4_XENTR ELAV-like protein 4 OS=Xenopus tropicalis GN=elavl4 PE=2 SV=1
Length = 400
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/90 (76%), Positives = 75/90 (83%)
Query: 29 LISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGL 88
+ QSLGYGFVNY P+DAEKAINTLNGLRLQ KTIKVSYARPSS SI+ ANLYVSGL
Sbjct: 114 IFGKGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGL 173
Query: 89 PKHMSQQELESLFSPYGRIITSRILCDNLA 118
PK M+Q+ELE LFS YGRIITSRIL D +
Sbjct: 174 PKTMTQKELEQLFSQYGRIITSRILVDQVT 203
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 54 NTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRIL 113
NT NG ++ ++ NL V+ LP++M+Q+E SLF G I + +++
Sbjct: 24 NTSNGPSSNSRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLV 83
Query: 114 CDNLA 118
D +
Sbjct: 84 RDKIT 88
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV ++A AI +LNG RL ++ ++VS+
Sbjct: 353 NTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 392
>sp|Q28FX0|ELAV3_XENTR ELAV-like protein 3 OS=Xenopus tropicalis GN=elavl3 PE=2 SV=1
Length = 343
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/98 (70%), Positives = 77/98 (78%), Gaps = 3/98 (3%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
T QSLGYGFVNY P DA+KAINTLNGL+LQ KTIKVSYARPSS SI+ ANLYVS LPK
Sbjct: 72 TGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSSLPKT 131
Query: 92 MSQQELESLFSPYGRIITSRILCDNLATENGKYYSGLG 129
M+Q+E+E LFS YGRIITSRIL D + G G+G
Sbjct: 132 MNQKEMEQLFSQYGRIITSRILVDQVT---GSVSRGVG 166
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 82 NLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENGKY 124
NL V+ LP++M+Q+E +SLF G I + +++ D + ++ Y
Sbjct: 36 NLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGY 78
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV ++A AI +LNG RL ++ ++VS+
Sbjct: 296 TTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 335
>sp|Q91584|ELAV3_XENLA ELAV-like protein 3 OS=Xenopus laevis GN=elavl3 PE=2 SV=1
Length = 348
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 73/86 (84%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
T QSLGYGFVNY P DA+KAINTLNGL+LQ KTIKVSYARPSS SI+ ANLYVS LPK
Sbjct: 71 TGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSSLPKT 130
Query: 92 MSQQELESLFSPYGRIITSRILCDNL 117
M+Q+E+E LFS YGRIITSRIL D +
Sbjct: 131 MNQKEMEQLFSQYGRIITSRILVDQV 156
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV ++A AI +LNG RL ++ ++VS+
Sbjct: 301 TTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 340
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 82 NLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENGKY 124
NL V+ LP++M+Q+E +SLF G I + +++ D + ++ Y
Sbjct: 35 NLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGY 77
>sp|Q1JQ73|ELV1A_XENLA ELAV-like protein 1-A OS=Xenopus laevis GN=elavl1-a PE=1 SV=1
Length = 337
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 73/86 (84%)
Query: 30 ISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLP 89
+S SLGYGFVNY +DAE+AINTLNGLRLQ+KTIKVS+ARPSSESIK ANLY+SGLP
Sbjct: 66 LSKGHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKVSFARPSSESIKDANLYISGLP 125
Query: 90 KHMSQQELESLFSPYGRIITSRILCD 115
+ M+Q+++E +F P+G II SR+L D
Sbjct: 126 RTMTQKDVEDMFLPFGHIINSRVLVD 151
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 76 ESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLA 118
+ I NL V+ LP++M+Q EL SLFS G + +++++ D +A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVA 57
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 30 ISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV E+A AI +LNG RL +KT++VS+
Sbjct: 290 FNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKTLQVSF 330
>sp|Q6GLB5|ELAV1_XENTR ELAV-like protein 1 OS=Xenopus tropicalis GN=elavl1 PE=2 SV=1
Length = 326
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 71/84 (84%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
SLGYGFVNY +DAE+AINTLNGLRLQ+KTIKVS ARPSSESIK ANLY+SGLP+
Sbjct: 57 AGHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKVSVARPSSESIKDANLYISGLPRT 116
Query: 92 MSQQELESLFSPYGRIITSRILCD 115
M+Q+++E +F P+GRII SR+L D
Sbjct: 117 MTQKDVEDMFLPFGRIINSRVLVD 140
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 76 ESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLA 118
+ I NL V+ LP++M+Q EL SLFS G + +++++ D +A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVA 57
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV E+A AI +LNG RL +KT++V +
Sbjct: 280 NTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKTLQVFF 319
>sp|Q15717|ELAV1_HUMAN ELAV-like protein 1 OS=Homo sapiens GN=ELAVL1 PE=1 SV=2
Length = 326
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 71/84 (84%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
SLGYGFVNY +DAE+AINTLNGLRLQ+KTIKVSYARPSSE IK ANLY+SGLP+
Sbjct: 57 AGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRT 116
Query: 92 MSQQELESLFSPYGRIITSRILCD 115
M+Q+++E +FS +GRII SR+L D
Sbjct: 117 MTQKDVEDMFSRFGRIINSRVLVD 140
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 82 NLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLA 118
NL V+ LP++M+Q EL SLFS G + +++++ D +A
Sbjct: 21 NLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVA 57
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 30 ISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV E+A AI +LNG RL +K ++VS+
Sbjct: 279 FNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSF 319
>sp|Q5U259|ELV1B_XENLA ELAV-like protein 1-B OS=Xenopus laevis GN=elavl1-b PE=1 SV=1
Length = 326
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 57/84 (67%), Positives = 71/84 (84%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
SLGYGFVNY +DAE+AINTLNGLRLQ+KTIKVS+ARPSSE+IK ANLY+SGLP+
Sbjct: 57 AGHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKVSFARPSSETIKDANLYISGLPRT 116
Query: 92 MSQQELESLFSPYGRIITSRILCD 115
M+Q+++E +F P+G II SR+L D
Sbjct: 117 MTQKDVEDMFLPFGHIINSRVLVD 140
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 76 ESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLA 118
+ I NL V+ LP++M+Q EL SLFS G + +++++ D +A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVA 57
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 30 ISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV E+A AI +LNG RL +KT++VS+
Sbjct: 279 FNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKTLQVSF 319
>sp|P70372|ELAV1_MOUSE ELAV-like protein 1 OS=Mus musculus GN=Elavl1 PE=1 SV=2
Length = 326
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 71/84 (84%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
SLGYGFVNY +DAE+AI+TLNGLRLQ+KTIKVSYARPSSE IK ANLY+SGLP+
Sbjct: 57 AGHSLGYGFVNYVTAKDAERAISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRT 116
Query: 92 MSQQELESLFSPYGRIITSRILCD 115
M+Q+++E +FS +GRII SR+L D
Sbjct: 117 MTQKDVEDMFSRFGRIINSRVLVD 140
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 71 ARPSSESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLA 118
A + I NL V+ LP++M+Q+EL SLFS G + +++++ D +A
Sbjct: 10 AEDCRDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVA 57
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY 70
+T + G+GFV E+A AI +LNG RL +K ++VS+
Sbjct: 280 NTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSF 319
>sp|O17310|SXL_MUSDO Sex-lethal homolog OS=Musca domestica GN=SXL PE=2 SV=1
Length = 324
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 57/86 (66%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
T S GY FV++ DA+ AI T+NG+ ++NK +KVSYARP ESIK NLYV+ LP+
Sbjct: 139 TGYSFGYAFVDFASEIDAQNAIKTVNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRT 198
Query: 92 MSQQELESLFSPYGRIITSRILCDNL 117
++ ELE +F YG I+ IL D L
Sbjct: 199 ITDDELEKIFGKYGNIVQKNILRDKL 224
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 75 SESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
++++ G NL V+ LP+ M+ +EL +LF G I T RI+ D
Sbjct: 96 TQAVNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKD 136
>sp|O97018|SXL_CHRRU Sex-lethal homolog OS=Chrysomya rufifacies GN=SXL PE=2 SV=2
Length = 307
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 57/86 (66%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
T S GY FV++ DA+ AI +LNG+ ++NK +KVSYARP ESIK NLYV+ LP+
Sbjct: 122 TGYSFGYAFVDFASEIDAQNAIKSLNGVTVRNKRLKVSYARPGGESIKDTNLYVTNLPRT 181
Query: 92 MSQQELESLFSPYGRIITSRILCDNL 117
++ ELE +F YG I+ IL D L
Sbjct: 182 ITDDELEKIFGKYGNIVQKNILRDKL 207
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 74 SSESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
++ G NL V+ LP+ M+ +EL +LF G I T RI+ D
Sbjct: 78 DNQGCNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKD 119
>sp|O61374|SXL_CERCA Sex-lethal homolog OS=Ceratitis capitata GN=SXL PE=2 SV=2
Length = 348
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 59/86 (68%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
T S GY FV++ D+++AI +LNG+ ++NK +KVSYARP ESIK NLYV+ LP+
Sbjct: 147 TGYSFGYAFVDFAAETDSQRAIKSLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRT 206
Query: 92 MSQQELESLFSPYGRIITSRILCDNL 117
++ +L+++F YG I+ IL D L
Sbjct: 207 ITDDQLDTIFGKYGMIVQKNILRDKL 232
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 80 GANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
G NL V+ LP+ M+ +EL +LF G I T RI+ D
Sbjct: 109 GTNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRD 144
>sp|Q24668|SXL_DROSU Protein sex-lethal OS=Drosophila subobscura GN=Sxl PE=2 SV=2
Length = 354
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
T S GY FV++ D+++AI LNG+ ++NK +KVSYARP ESIK NLYV+ LP+
Sbjct: 164 TGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRT 223
Query: 92 MSQQELESLFSPYGRIITSRILCDNL 117
++ +L+++F YG I+ IL D L
Sbjct: 224 ITDDQLDTIFGKYGSIVQKNILRDKL 249
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 82 NLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
NL V+ LP+ M+ +EL +LF G I T RI+ D
Sbjct: 128 NLIVNYLPQDMTDRELYALFRAIGPINTCRIMRD 161
>sp|P19339|SXL_DROME Protein sex-lethal OS=Drosophila melanogaster GN=Sxl PE=1 SV=1
Length = 354
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
T S GY FV++ D+++AI LNG+ ++NK +KVSYARP ESIK NLYV+ LP+
Sbjct: 162 TGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRT 221
Query: 92 MSQQELESLFSPYGRIITSRILCDNL 117
++ +L+++F YG I+ IL D L
Sbjct: 222 ITDDQLDTIFGKYGSIVQKNILRDKL 247
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 46 PEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKHMSQQELESLFSPYG 105
P + ++N L GL L + P + + NL V+ LP+ M+ +EL +LF G
Sbjct: 93 PMASNNSLNNLCGLSLGSGGSDDLMNDPRASN---TNLIVNYLPQDMTDRELYALFRAIG 149
Query: 106 RIITSRILCD 115
I T RI+ D
Sbjct: 150 PINTCRIMRD 159
>sp|O01671|SXL_MEGSC Sex-lethal homolog OS=Megaselia scalaris GN=SXL PE=2 SV=3
Length = 321
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 58/84 (69%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPKH 91
T S GYGFV++ DA +AIN LNG+ ++NK IKVS+ARP E ++ NLYV+ L +
Sbjct: 115 TGYSYGYGFVDFGSEADALRAINNLNGITVRNKRIKVSFARPGGEQLRDTNLYVTNLSRS 174
Query: 92 MSQQELESLFSPYGRIITSRILCD 115
++ ++LE++F YG+I+ IL D
Sbjct: 175 ITDEQLETIFGKYGQIVQKNILRD 198
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 74 SSESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
S + G NL V+ LP+ M +EL SLF G I T RI+ D
Sbjct: 71 SGTNNSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRD 112
>sp|P29558|RBMS1_HUMAN RNA-binding motif, single-stranded-interacting protein 1 OS=Homo
sapiens GN=RBMS1 PE=1 SV=3
Length = 406
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 7/103 (6%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPK 90
+T + GYGFV++ P A+KA++ L +Q + K P+ NLY+S LP
Sbjct: 98 TTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPT-------NLYISNLPL 150
Query: 91 HMSQQELESLFSPYGRIITSRILCDNLATENGKYYSGLGGRER 133
M +QELE++ P+G++I++RIL D+ T G ++ + E+
Sbjct: 151 SMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEK 193
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 76 ESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
+ + NLY+ GLP H + Q+L L PYG+I++++ + D
Sbjct: 57 DQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILD 96
>sp|Q3ZBP3|RBMS1_BOVIN RNA-binding motif, single-stranded-interacting protein 1 OS=Bos
taurus GN=RBMS1 PE=2 SV=1
Length = 403
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 7/103 (6%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPK 90
+T + GYGFV++ P A+KA++ L +Q + K P+ NLY+S LP
Sbjct: 98 TTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPT-------NLYISNLPL 150
Query: 91 HMSQQELESLFSPYGRIITSRILCDNLATENGKYYSGLGGRER 133
M +QELE++ P+G++I++RIL D+ T G ++ + E+
Sbjct: 151 SMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEK 193
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 26/40 (65%)
Query: 76 ESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
+ + NLY+ GLP + + Q+L L PYG+I++++ + D
Sbjct: 57 DQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILD 96
>sp|Q3ZC34|RBMS2_BOVIN RNA-binding motif, single-stranded-interacting protein 2 OS=Bos
taurus GN=RBMS2 PE=2 SV=1
Length = 407
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPK 90
+T + GYGFV++ P A+KA+ L +Q + K P+ NLY+S LP
Sbjct: 92 TTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAKQQEQDPT-------NLYISNLPL 144
Query: 91 HMSQQELESLFSPYGRIITSRILCDNLATENGKYYSGLGGRER 133
M +QELE + P+G++I++RIL D T G ++ + E+
Sbjct: 145 SMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFARMESTEK 187
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 76 ESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
+ + NLY+ GL + Q+L L YG+I++++ + D
Sbjct: 51 DQLSKTNLYIRGLQPSTTDQDLVKLCQSYGKIVSTKAILD 90
>sp|Q15434|RBMS2_HUMAN RNA-binding motif, single-stranded-interacting protein 2 OS=Homo
sapiens GN=RBMS2 PE=1 SV=1
Length = 407
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPK 90
+T + GYGFV++ P A+KA+ L +Q + K P+ NLY+S LP
Sbjct: 92 TTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAKQQEQDPT-------NLYISNLPL 144
Query: 91 HMSQQELESLFSPYGRIITSRILCDNLATENGKYYSGLGGRER 133
M +QELE + P+G++I++RIL D T G ++ + E+
Sbjct: 145 SMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFARMESTEK 187
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 76 ESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
+ + NLY+ GL + Q+L L PYG+I++++ + D
Sbjct: 51 DQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILD 90
>sp|Q5PQP1|RBMS1_RAT RNA-binding motif, single-stranded-interacting protein 1 OS=Rattus
norvegicus GN=Rbms1 PE=2 SV=1
Length = 403
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 7/103 (6%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPK 90
+T + GYGFV++ P A+KA++ L +Q + K P+ NLY+S LP
Sbjct: 98 ATNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPT-------NLYISNLPL 150
Query: 91 HMSQQELESLFSPYGRIITSRILCDNLATENGKYYSGLGGRER 133
M +QELE++ P+G++I++R+L D+ T G ++ + E+
Sbjct: 151 SMDEQELENMLKPFGQVISTRVLRDSSGTSRGVGFARMESTEK 193
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 76 ESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENGKYY 125
+ + NLY+ GLP + + Q+L L PYG+I++++ + D AT K Y
Sbjct: 57 DQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDK-ATNKCKGY 105
>sp|Q8BWL5|RBMS3_MOUSE RNA-binding motif, single-stranded-interacting protein 3 OS=Mus
musculus GN=Rbms3 PE=2 SV=2
Length = 431
Score = 66.6 bits (161), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPK 90
+T Q GYGFV++ P A+KA+ +L +Q + K P+ NLY+S LP
Sbjct: 92 NTNQCKGYGFVDFDSPAAAQKAVASLKANGVQAQMAKQQEQDPT-------NLYISNLPI 144
Query: 91 HMSQQELESLFSPYGRIITSRILCDNLATENGKYYSGLGGRER 133
M +QELE++ P+G +I++RIL D G ++ + E+
Sbjct: 145 SMDEQELENMLKPFGHVISTRILRDANGVSRGVGFARMESTEK 187
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 76 ESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
E + NLY+ GLP + Q+L L PYG+I++++ + D
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILD 90
>sp|Q8VC70|RBMS2_MOUSE RNA-binding motif, single-stranded-interacting protein 2 OS=Mus
musculus GN=Rbms2 PE=2 SV=1
Length = 383
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPK 90
+T + GYGFV++ P A+KA+ L +Q + K P+ NLY+S LP
Sbjct: 94 TTNKCKGYGFVDFDSPSSAQKAVTALKASGVQAQMAKQQEQDPT-------NLYISNLPL 146
Query: 91 HMSQQELESLFSPYGRIITSRILCDNLATENGKYYSGLGGRER 133
M +QELE + P+G++I++RIL D G ++ + E+
Sbjct: 147 SMDEQELEGMLKPFGQVISTRILRDTSGASRGVGFARMESTEK 189
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 76 ESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
+ + NLY+ GL + Q+L L PYG+I++++ + D
Sbjct: 53 DQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILD 92
>sp|B4PIS2|SHEP_DROYA Protein alan shepard OS=Drosophila yakuba GN=shep PE=3 SV=1
Length = 582
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPK 90
+T + GYGFV++ +P AE A+ L G +Q + K P+ NLY++ LP
Sbjct: 267 TTNKCKGYGFVDFEQPAFAECAVKGLQGKGVQAQMAKQQEQDPT-------NLYIANLPP 319
Query: 91 HMSQQELESLFSPYGRIITSRILCDNLATENGKYYSGLGGRER 133
H + +LE++ S YG+++++RIL D G ++ + RE+
Sbjct: 320 HFKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREK 362
>sp|Q8MSV2|SHEP_DROME Protein alan shepard OS=Drosophila melanogaster GN=shep PE=1 SV=1
Length = 578
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPK 90
+T + GYGFV++ +P AE A+ L G +Q + K P+ NLY++ LP
Sbjct: 267 TTNKCKGYGFVDFEQPAFAECAVKGLQGKGVQAQMAKQQEQDPT-------NLYIANLPP 319
Query: 91 HMSQQELESLFSPYGRIITSRILCDNLATENGKYYSGLGGRER 133
H + +LE++ S YG+++++RIL D G ++ + RE+
Sbjct: 320 HFKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREK 362
>sp|B3NGA1|SHEP_DROER Protein alan shepard OS=Drosophila erecta GN=shep PE=3 SV=1
Length = 582
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPK 90
+T + GYGFV++ +P AE A+ L G +Q + K P+ NLY++ LP
Sbjct: 267 TTNKCKGYGFVDFEQPAFAECAVKGLQGKGVQAQMAKQQEQDPT-------NLYIANLPP 319
Query: 91 HMSQQELESLFSPYGRIITSRILCDNLATENGKYYSGLGGRER 133
H + +LE++ S YG+++++RIL D G ++ + RE+
Sbjct: 320 HFKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREK 362
>sp|Q5RBD3|RBMS3_PONAB RNA-binding motif, single-stranded-interacting protein 3 OS=Pongo
abelii GN=RBMS3 PE=2 SV=1
Length = 436
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPK 90
+T Q GYGFV++ P A+KA+ +L +Q + K P+ NLY+S LP
Sbjct: 96 NTNQCKGYGFVDFDSPAAAQKAVASLKANGVQAQMAKQQEQDPT-------NLYISNLPI 148
Query: 91 HMSQQELESLFSPYGRIITSRILCDNLATENGKYYSGLGGRER 133
M +QELE++ P+G +I++RIL D G ++ + E+
Sbjct: 149 SMDEQELENMLKPFGHVISTRILRDANGVSRGVGFARMESTEK 191
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 76 ESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
E + NLY+ GLP + Q+L L PYG+I++++ + D
Sbjct: 55 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILD 94
>sp|Q6XE24|RBMS3_HUMAN RNA-binding motif, single-stranded-interacting protein 3 OS=Homo
sapiens GN=RBMS3 PE=1 SV=1
Length = 437
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPK 90
+T Q GYGFV++ P A+KA+ +L +Q + K P+ NLY+S LP
Sbjct: 97 NTNQCKGYGFVDFDSPAAAQKAVASLKANGVQAQMAKQQEQDPT-------NLYISNLPI 149
Query: 91 HMSQQELESLFSPYGRIITSRILCDNLATENGKYYSGLGGRER 133
M +QELE++ P+G +I++RIL D G ++ + E+
Sbjct: 150 SMDEQELENMLKPFGHVISTRILRDANGVSRGVGFARMESTEK 192
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 76 ESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
E + NLY+ GLP + Q+L L PYG+I++++ + D
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILD 95
>sp|B4HUE4|SHEP_DROSE Protein alan shepard OS=Drosophila sechellia GN=shep PE=3 SV=1
Length = 579
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPK 90
+T + GYGFV++ +P AE A+ L G +Q + K P+ NLY++ LP
Sbjct: 267 TTNKCKGYGFVDFEQPAFAECAVKGLQGKGVQAQMAKQQEQDPT-------NLYIANLPP 319
Query: 91 HMSQQELESLFSPYGRIITSRILCDNLATENGKYYSGLGGRER 133
H + +LE++ S YG+++++RIL D G ++ + RE+
Sbjct: 320 HFKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREK 362
>sp|Q91W59|RBMS1_MOUSE RNA-binding motif, single-stranded-interacting protein 1 OS=Mus
musculus GN=Rbms1 PE=2 SV=1
Length = 403
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPK 90
+T + GYGFV++ P A+KA++ L +Q + K P+ NLY+S LP
Sbjct: 98 ATNKCKGYGFVDFDSPAAAQKAVSALKANGVQAQMAKQQEQDPT-------NLYISNLPL 150
Query: 91 HMSQQELESLFSPYGRIITSRILCDNLATENGKYYSGLGGRER 133
M +QELE++ P+G++I++R+L D+ G ++ + E+
Sbjct: 151 SMDEQELENMLKPFGQVISTRVLRDSSGASRGVGFARMESTEK 193
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 76 ESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENGKYY 125
+ + NLY+ GLP + + Q+L L PYG+I++++ + D AT K Y
Sbjct: 57 DQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDK-ATNKCKGY 105
>sp|B4MM23|SHEP_DROWI Protein alan shepard OS=Drosophila willistoni GN=shep PE=3 SV=2
Length = 581
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 31 STAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGLPK 90
+T + GYGFV++ +P AE A+ L +Q + K P+ NLY++ LP
Sbjct: 273 TTNKCKGYGFVDFEQPAYAENAVKGLQAKGVQAQMAKQQEQDPT-------NLYIANLPP 325
Query: 91 HMSQQELESLFSPYGRIITSRILCDNLATENGKYYSGLGGRER 133
H + +LE++ S YG+++++RIL D G ++ + RE+
Sbjct: 326 HFKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREK 368
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 76 ESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENGKY 124
E + NLY+ GL + + ++L ++ + YG II+++ + D + Y
Sbjct: 232 EQLSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGY 280
>sp|Q6IP09|PABPB_XENLA Polyadenylate-binding protein 1-B OS=Xenopus laevis GN=pabpc1-b
PE=2 SV=1
Length = 633
Score = 63.9 bits (154), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 57/93 (61%), Gaps = 6/93 (6%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYAR--PSSESIKGANLYVSGLP 89
T +SLGY +VN+ +P DAE+A++T+N ++ K +++ +++ PS N+++ L
Sbjct: 48 TRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLD 107
Query: 90 KHMSQQELESLFSPYGRIITSRILCDNLATENG 122
K + + L FS +G I++ +++CD ENG
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCD----ENG 136
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 18/101 (17%)
Query: 33 AQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSE---------------- 76
+S G+GFV++ R EDA+KA++ +NG L K I V A+ E
Sbjct: 228 GKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDR 287
Query: 77 --SIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
+G NLYV L + + L F+P+G I +++++ +
Sbjct: 288 ITRYQGVNLYVKNLDDGIDDERLRKEFTPFGSITSAKVMME 328
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 19 GFSDAEICVFLISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY--ARPSSE 76
F + C + S GYGFV++ E AE+AI+ +NG+ L ++ + V +R E
Sbjct: 121 AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKERE 180
Query: 77 SIKGA------NLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENG 122
+ GA N+Y+ + M + L+ F YG ++ +++ D+ G
Sbjct: 181 AELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRG 232
Score = 36.2 bits (82), Expect = 0.059, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 29 LISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYVSGL 88
++ +S G+GFV + PE+A KA+ +NG + K + V+ A+ E + A+L +
Sbjct: 326 MMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEE--RQAHLTNQYM 383
Query: 89 PKHMSQQELESLFSPY 104
+ S + + +PY
Sbjct: 384 QRMASVRVPNPVINPY 399
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 73 PSSESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENGKYYS 126
PS+ S A+LYV L +++ L FSP G I++ R+ C ++ T Y+
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRV-CRDMITRRSLGYA 55
>sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2
Length = 636
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 57/93 (61%), Gaps = 6/93 (6%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYAR--PSSESIKGANLYVSGLP 89
T +SLGY +VN+ +P DAE+A++T+N ++ K +++ +++ PS N+++ L
Sbjct: 48 TRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLD 107
Query: 90 KHMSQQELESLFSPYGRIITSRILCDNLATENG 122
K + + L FS +G I++ +++CD ENG
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCD----ENG 136
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 18/102 (17%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSE--------------- 76
+ +S G+GFV++ R EDA+KA++ +NG L K I V A+ E
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Query: 77 ---SIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
+G NLYV L + + L FSP+G I +++++ +
Sbjct: 287 RITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME 328
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 19 GFSDAEICVFLISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY--ARPSSE 76
F + C + S GYGFV++ E AE+AI +NG+ L ++ + V +R E
Sbjct: 121 AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE 180
Query: 77 SIKGA------NLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENG 122
+ GA N+Y+ + M + L+ LF +G ++ +++ D G
Sbjct: 181 AELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKG 232
Score = 35.8 bits (81), Expect = 0.082, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 29 LISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSE 76
++ +S G+GFV + PE+A KA+ +NG + K + V+ A+ E
Sbjct: 326 MMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEE 373
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 73 PSSESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENGKYYS 126
PS+ S A+LYV L +++ L FSP G I++ R+ C ++ T Y+
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRV-CRDMITRRSLGYA 55
>sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1
Length = 636
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 57/93 (61%), Gaps = 6/93 (6%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYAR--PSSESIKGANLYVSGLP 89
T +SLGY +VN+ +P DAE+A++T+N ++ K +++ +++ PS N+++ L
Sbjct: 48 TRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLD 107
Query: 90 KHMSQQELESLFSPYGRIITSRILCDNLATENG 122
K + + L FS +G I++ +++CD ENG
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCD----ENG 136
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 18/102 (17%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSE--------------- 76
+ +S G+GFV++ R EDA+KA++ +NG L K I V A+ E
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Query: 77 ---SIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
+G NLYV L + + L FSP+G I +++++ +
Sbjct: 287 RITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME 328
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 19 GFSDAEICVFLISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY--ARPSSE 76
F + C + S GYGFV++ E AE+AI +NG+ L ++ + V +R E
Sbjct: 121 AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE 180
Query: 77 SIKGA------NLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENG 122
+ GA N+Y+ + M + L+ LF +G ++ +++ D G
Sbjct: 181 AELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKG 232
Score = 35.8 bits (81), Expect = 0.082, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 29 LISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSE 76
++ +S G+GFV + PE+A KA+ +NG + K + V+ A+ E
Sbjct: 326 MMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEE 373
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 73 PSSESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENGKYYS 126
PS+ S A+LYV L +++ L FSP G I++ R+ C ++ T Y+
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRV-CRDMITRRSLGYA 55
>sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1
Length = 636
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 57/93 (61%), Gaps = 6/93 (6%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYAR--PSSESIKGANLYVSGLP 89
T +SLGY +VN+ +P DAE+A++T+N ++ K +++ +++ PS N+++ L
Sbjct: 48 TRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLD 107
Query: 90 KHMSQQELESLFSPYGRIITSRILCDNLATENG 122
K + + L FS +G I++ +++CD ENG
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCD----ENG 136
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 18/102 (17%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSE--------------- 76
+ +S G+GFV++ R EDA+KA++ +NG L K I V A+ E
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Query: 77 ---SIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
+G NLYV L + + L FSP+G I +++++ +
Sbjct: 287 RITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME 328
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 19 GFSDAEICVFLISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY--ARPSSE 76
F + C + S GYGFV++ E AE+AI +NG+ L ++ + V +R E
Sbjct: 121 AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE 180
Query: 77 SIKGA------NLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENG 122
+ GA N+Y+ + M + L+ LF +G ++ +++ D G
Sbjct: 181 AELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKG 232
Score = 35.8 bits (81), Expect = 0.082, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 29 LISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSE 76
++ +S G+GFV + PE+A KA+ +NG + K + V+ A+ E
Sbjct: 326 MMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEE 373
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 73 PSSESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENGKYYS 126
PS+ S A+LYV L ++ L FSP G I++ R+ C ++ T Y+
Sbjct: 3 PSAPSYPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRV-CRDMITRRSLGYA 55
>sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1
Length = 644
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 57/93 (61%), Gaps = 6/93 (6%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYAR--PSSESIKGANLYVSGLP 89
T +SLGY +VN+ +P DAE+A++T+N ++ K I++ +++ PS N+++ L
Sbjct: 48 TRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLD 107
Query: 90 KHMSQQELESLFSPYGRIITSRILCDNLATENG 122
K + + L FS +G I++ +++CD ENG
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCD----ENG 136
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 18/102 (17%)
Query: 33 AQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSE---------------- 76
+S G+GFV+Y + EDA KA+ +NG + K I V A+ E
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQER 287
Query: 77 --SIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCDN 116
+G NLY+ L + ++L FSP+G I +++++ ++
Sbjct: 288 ISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED 329
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 19 GFSDAEICVFLISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY--ARPSSE 76
F + C + S GY FV++ E A+KAI +NG+ L ++ + V +R E
Sbjct: 121 AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE 180
Query: 77 SIKGA------NLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENGK 123
+ GA N+Y+ + + + L+ LFS +G+ ++ +++ D NGK
Sbjct: 181 AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD----PNGK 229
Score = 35.8 bits (81), Expect = 0.075, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 29 LISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSE 76
++ +S G+GFV + PE+A KA+ +NG + +K + V+ A+ E
Sbjct: 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEE 373
>sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=2
Length = 636
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 57/93 (61%), Gaps = 6/93 (6%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYAR--PSSESIKGANLYVSGLP 89
T +SLGY +VN+ +P DAE+A++T+N ++ K +++ +++ PS N+++ L
Sbjct: 48 TRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLD 107
Query: 90 KHMSQQELESLFSPYGRIITSRILCDNLATENG 122
K + + L FS +G I++ +++CD ENG
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCD----ENG 136
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 18/102 (17%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSE--------------- 76
+ +S G+GFV++ R EDA+KA++ +NG L K I V A+ E
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Query: 77 ---SIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
+G NLYV L + + L FSP+G I +++++ +
Sbjct: 287 RITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME 328
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 19 GFSDAEICVFLISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY--ARPSSE 76
F + C + S GYGFV++ E AE+AI +NG+ L ++ + V +R E
Sbjct: 121 AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE 180
Query: 77 SIKGA------NLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENG 122
+ GA N+Y+ + M + L+ LF +G ++ +++ D G
Sbjct: 181 AELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKG 232
Score = 35.8 bits (81), Expect = 0.083, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 29 LISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSE 76
++ +S G+GFV + PE+A KA+ +NG + K + V+ A+ E
Sbjct: 326 MMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEE 373
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 73 PSSESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENGKYYS 126
PS+ S A+LYV L +++ L FSP G I++ R+ C ++ T Y+
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRV-CRDMITRRSLGYA 55
>sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2
SV=1
Length = 636
Score = 63.5 bits (153), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 57/93 (61%), Gaps = 6/93 (6%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYAR--PSSESIKGANLYVSGLP 89
T +SLGY +VN+ +P DAE+A++T+N ++ K +++ +++ PS N+++ L
Sbjct: 48 TRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLD 107
Query: 90 KHMSQQELESLFSPYGRIITSRILCDNLATENG 122
K + + L FS +G I++ +++CD ENG
Sbjct: 108 KSIDNKALYDTFSAFGNILSCKVVCD----ENG 136
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 18/102 (17%)
Query: 32 TAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSE--------------- 76
+ +S G+GFV++ R EDA+KA++ +NG L K I V A+ E
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Query: 77 ---SIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCD 115
+G NLYV L + + L FSP+G I +++++ +
Sbjct: 287 RITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 19 GFSDAEICVFLISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSY--ARPSSE 76
F + C + S GYGFV++ E AE+AI +NG+ L ++ + V +R E
Sbjct: 121 AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE 180
Query: 77 SIKGA------NLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENG 122
+ GA N+Y+ + M + L+ LF +G ++ +++ D G
Sbjct: 181 AELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKG 232
Score = 35.8 bits (81), Expect = 0.084, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 29 LISTAQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSE 76
++ +S G+GFV + PE+A KA+ +NG + K + V+ A+ E
Sbjct: 326 MMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEE 373
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 73 PSSESIKGANLYVSGLPKHMSQQELESLFSPYGRIITSRILCDNLATENGKYYS 126
PS+ S A+LYV L +++ L FSP G I++ R+ C ++ T Y+
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRV-CRDMITRRSLGYA 55
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,687,536
Number of Sequences: 539616
Number of extensions: 1776896
Number of successful extensions: 6786
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 5229
Number of HSP's gapped (non-prelim): 1550
length of query: 136
length of database: 191,569,459
effective HSP length: 101
effective length of query: 35
effective length of database: 137,068,243
effective search space: 4797388505
effective search space used: 4797388505
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)