BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6355
(83 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383865034|ref|XP_003707981.1| PREDICTED: ELAV-like protein 2-like [Megachile rotundata]
Length = 502
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 61/74 (82%), Positives = 67/74 (90%), Gaps = 3/74 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAAAA 70
+GFIRFDQR+EAERAIQELNGTIPKGS+EPITVKFAN+PS++NK I PLAAYLTPQ A
Sbjct: 170 VGFIRFDQRVEAERAIQELNGTIPKGSSEPITVKFANNPSNNNKAIPPLAAYLTPQ--AT 227
Query: 71 RRFGGPIHH-AGRF 83
RRFGGPIHH GRF
Sbjct: 228 RRFGGPIHHPTGRF 241
>gi|345493619|ref|XP_003427110.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Nasonia vitripennis]
Length = 383
Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/78 (78%), Positives = 67/78 (85%), Gaps = 3/78 (3%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
+ +GFIRFDQR+EAERAIQELNGTIPKGS EPITVKFAN+PS++NK I PLAAYLTPQ
Sbjct: 186 LSKGVGFIRFDQRVEAERAIQELNGTIPKGSTEPITVKFANNPSNNNKAIPPLAAYLTPQ 245
Query: 67 AAAARRFGGPIHH-AGRF 83
A RRFGGPIHH GRF
Sbjct: 246 --ATRRFGGPIHHPTGRF 261
>gi|307194503|gb|EFN76795.1| ELAV-like protein 2 [Harpegnathos saltator]
Length = 349
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 68/81 (83%), Gaps = 3/81 (3%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYL 63
T + +GFIRFDQR+EAERAIQELNGTIPKGS+EPITVKFAN+PS++NK I PLAAYL
Sbjct: 149 ITGLSKGVGFIRFDQRVEAERAIQELNGTIPKGSSEPITVKFANNPSNNNKAIPPLAAYL 208
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
PQ A RRFGGPIHH GRF
Sbjct: 209 APQ--ATRRFGGPIHHPTGRF 227
>gi|345493621|ref|XP_003427111.1| PREDICTED: ELAV-like protein 3-like isoform 3 [Nasonia vitripennis]
gi|345493623|ref|XP_001603257.2| PREDICTED: ELAV-like protein 3-like isoform 1 [Nasonia vitripennis]
Length = 349
Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/78 (78%), Positives = 67/78 (85%), Gaps = 3/78 (3%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
+ +GFIRFDQR+EAERAIQELNGTIPKGS EPITVKFAN+PS++NK I PLAAYLTPQ
Sbjct: 166 LSKGVGFIRFDQRVEAERAIQELNGTIPKGSTEPITVKFANNPSNNNKAIPPLAAYLTPQ 225
Query: 67 AAAARRFGGPIHH-AGRF 83
A RRFGGPIHH GRF
Sbjct: 226 --ATRRFGGPIHHPTGRF 241
>gi|332029758|gb|EGI69627.1| ELAV-like protein 2 [Acromyrmex echinatior]
Length = 359
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 68/81 (83%), Gaps = 3/81 (3%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYL 63
T + +GFIRFDQR+EAERAIQELNGTIPKGS+EPITVKFAN+PS++NK I PLAAYL
Sbjct: 150 ITGLSKGVGFIRFDQRVEAERAIQELNGTIPKGSSEPITVKFANNPSNNNKAIPPLAAYL 209
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
PQ A RRFGGPIHH GRF
Sbjct: 210 APQ--ATRRFGGPIHHPTGRF 228
>gi|322798581|gb|EFZ20185.1| hypothetical protein SINV_01390 [Solenopsis invicta]
Length = 523
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 68/81 (83%), Gaps = 3/81 (3%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYL 63
T + +GFIRFDQR+EAERAIQELNGTIPKGS+EPITVKFAN+PS++NK I PLAAYL
Sbjct: 149 ITGLSKGVGFIRFDQRVEAERAIQELNGTIPKGSSEPITVKFANNPSNNNKAIPPLAAYL 208
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
PQ A RRFGGPIHH GRF
Sbjct: 209 APQ--ATRRFGGPIHHPTGRF 227
>gi|270014670|gb|EFA11118.1| hypothetical protein TcasGA2_TC004718 [Tribolium castaneum]
Length = 350
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 61/80 (76%), Positives = 67/80 (83%), Gaps = 3/80 (3%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T + +GFIRFDQR+EAERAIQELNGTIPKGS EPITVKFAN+PS++NK I PLAAYLT
Sbjct: 165 TGLSKGVGFIRFDQRLEAERAIQELNGTIPKGSTEPITVKFANNPSNNNKAIPPLAAYLT 224
Query: 65 PQAAAARRFGGPIHH-AGRF 83
PQ A RRF GPIHH GRF
Sbjct: 225 PQ--ATRRFAGPIHHPTGRF 242
>gi|189233813|ref|XP_971256.2| PREDICTED: similar to RNA-binding protein, putative [Tribolium
castaneum]
Length = 352
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 61/80 (76%), Positives = 67/80 (83%), Gaps = 3/80 (3%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T + +GFIRFDQR+EAERAIQELNGTIPKGS EPITVKFAN+PS++NK I PLAAYLT
Sbjct: 167 TGLSKGVGFIRFDQRLEAERAIQELNGTIPKGSTEPITVKFANNPSNNNKAIPPLAAYLT 226
Query: 65 PQAAAARRFGGPIHH-AGRF 83
PQ A RRF GPIHH GRF
Sbjct: 227 PQ--ATRRFAGPIHHPTGRF 244
>gi|307168947|gb|EFN61833.1| ELAV-like protein 4 [Camponotus floridanus]
Length = 466
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/78 (76%), Positives = 67/78 (85%), Gaps = 3/78 (3%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
+ +GFIRFDQR+EAERAIQELNGTIPKGS+EPITVKFAN+PS++NK I PLAAYL PQ
Sbjct: 166 LSKGVGFIRFDQRVEAERAIQELNGTIPKGSSEPITVKFANNPSNNNKAIPPLAAYLAPQ 225
Query: 67 AAAARRFGGPIHH-AGRF 83
A RRFGGPIHH GRF
Sbjct: 226 --ATRRFGGPIHHPTGRF 241
>gi|328792242|ref|XP_394166.4| PREDICTED: ELAV-like protein 2-like [Apis mellifera]
Length = 378
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 60/80 (75%), Positives = 68/80 (85%), Gaps = 4/80 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T + +GFIRFDQR+EAERAIQELNGTIPKGS+EPITVKFAN+PS++NK I PL AYLT
Sbjct: 180 TGLSKGVGFIRFDQRVEAERAIQELNGTIPKGSSEPITVKFANNPSNNNKAIPPL-AYLT 238
Query: 65 PQAAAARRFGGPIHH-AGRF 83
PQ A RR+GGPIHH GRF
Sbjct: 239 PQ--ATRRYGGPIHHPTGRF 256
>gi|380027075|ref|XP_003697261.1| PREDICTED: ELAV-like protein 2-like [Apis florea]
Length = 362
Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 59/74 (79%), Positives = 66/74 (89%), Gaps = 4/74 (5%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAAAA 70
+GFIRFDQR+EAERAIQELNGTIPKGS+EPITVKFAN+PS++NK I PL AYLTPQ A
Sbjct: 170 VGFIRFDQRVEAERAIQELNGTIPKGSSEPITVKFANNPSNNNKAIPPL-AYLTPQ--AT 226
Query: 71 RRFGGPIHH-AGRF 83
RR+GGPIHH GRF
Sbjct: 227 RRYGGPIHHPTGRF 240
>gi|340709266|ref|XP_003393232.1| PREDICTED: ELAV-like protein 2-like [Bombus terrestris]
Length = 533
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 57/74 (77%), Positives = 65/74 (87%), Gaps = 4/74 (5%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAAAA 70
+GFIRFDQR+EAERAIQELNGT+PKGS+EPITVKFAN+PS++NK I PL AYL PQ A
Sbjct: 170 VGFIRFDQRVEAERAIQELNGTVPKGSSEPITVKFANNPSNNNKAIPPL-AYLAPQ--AT 226
Query: 71 RRFGGPIHH-AGRF 83
RR+GGPIHH GRF
Sbjct: 227 RRYGGPIHHPTGRF 240
>gi|350425139|ref|XP_003494024.1| PREDICTED: ELAV-like protein 2-like [Bombus impatiens]
Length = 371
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 57/74 (77%), Positives = 65/74 (87%), Gaps = 4/74 (5%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAAAA 70
+GFIRFDQR+EAERAIQELNGT+PKGS+EPITVKFAN+PS++NK I PL AYL PQ A
Sbjct: 170 VGFIRFDQRVEAERAIQELNGTVPKGSSEPITVKFANNPSNNNKAIPPL-AYLAPQ--AT 226
Query: 71 RRFGGPIHH-AGRF 83
RR+GGPIHH GRF
Sbjct: 227 RRYGGPIHHPTGRF 240
>gi|242005325|ref|XP_002423520.1| protein elav, putative [Pediculus humanus corporis]
gi|212506634|gb|EEB10782.1| protein elav, putative [Pediculus humanus corporis]
Length = 373
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 3/81 (3%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYL 63
T + +GFIRFDQR+EAERAI ELNG+IPK S +PITVKFAN+PS++NK I PLAAYL
Sbjct: 187 ITGLSKGVGFIRFDQRMEAERAISELNGSIPKNSTDPITVKFANNPSNNNKAIPPLAAYL 246
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
PQ AARRF GPIHH GRF
Sbjct: 247 APQ--AARRFAGPIHHPTGRF 265
>gi|157119097|ref|XP_001659335.1| RNA-binding protein, putative [Aedes aegypti]
gi|108875486|gb|EAT39711.1| AAEL008516-PA, partial [Aedes aegypti]
Length = 359
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 4/81 (4%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYL 63
T + +GFIRFDQR+EAE+AI+ELNGTIPKGS EPITVKFAN+PS++ K + PLAAYL
Sbjct: 167 ITGLSKGVGFIRFDQRVEAEKAIKELNGTIPKGSTEPITVKFANNPSNT-KTVPPLAAYL 225
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
PQ AARRF GPIHH GRF
Sbjct: 226 GPQ--AARRFPGPIHHPTGRF 244
>gi|157114005|ref|XP_001657938.1| RNA-binding protein, putative [Aedes aegypti]
gi|108877490|gb|EAT41715.1| AAEL006675-PA, partial [Aedes aegypti]
Length = 359
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 4/81 (4%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYL 63
T + +GFIRFDQR+EAE+AI+ELNGTIPKGS EPITVKFAN+PS++ K + PLAAYL
Sbjct: 167 ITGLSKGVGFIRFDQRVEAEKAIKELNGTIPKGSTEPITVKFANNPSNT-KTVPPLAAYL 225
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
PQ AARRF GPIHH GRF
Sbjct: 226 GPQ--AARRFPGPIHHPTGRF 244
>gi|158298951|ref|XP_319085.4| AGAP009952-PA [Anopheles gambiae str. PEST]
gi|157014134|gb|EAA13895.5| AGAP009952-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 4/81 (4%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYL 63
T + +GFIRFDQR+EAE+AI+ELNGT+PKGS EPITVKFAN+PSS+ K + PLAAYL
Sbjct: 171 ITGLSKGVGFIRFDQRMEAEKAIKELNGTVPKGSTEPITVKFANNPSST-KTVPPLAAYL 229
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
PQ AARRF GPIHH GRF
Sbjct: 230 GPQ--AARRFPGPIHHPTGRF 248
>gi|170028363|ref|XP_001842065.1| RNA-binding protein [Culex quinquefasciatus]
gi|167874220|gb|EDS37603.1| RNA-binding protein [Culex quinquefasciatus]
Length = 365
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 64/78 (82%), Gaps = 4/78 (5%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
+ +GFIRFDQR EAE+AI+ELNGTIPKGS EPITVKFAN+PS++ K + PLAAYL PQ
Sbjct: 182 LSKGVGFIRFDQRTEAEKAIKELNGTIPKGSTEPITVKFANNPSNT-KTVPPLAAYLGPQ 240
Query: 67 AAAARRFGGPIHH-AGRF 83
AARRF GP+HH GRF
Sbjct: 241 --AARRFAGPMHHPTGRF 256
>gi|328700227|ref|XP_001951393.2| PREDICTED: ELAV-like protein 4-like isoform 1 [Acyrthosiphon pisum]
Length = 383
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 58/75 (77%), Positives = 62/75 (82%), Gaps = 5/75 (6%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAAAA 70
+GFIRFDQRIEAERAIQELNGT+PKGS E ITVKFAN+P SSNK + LAAYLTPQ A
Sbjct: 175 VGFIRFDQRIEAERAIQELNGTVPKGSTESITVKFANNP-SSNKAVPALAAYLTPQ--GA 231
Query: 71 RRF-GGPIHH-AGRF 83
RRF GPIHH GRF
Sbjct: 232 RRFAAGPIHHPTGRF 246
>gi|328700229|ref|XP_003241188.1| PREDICTED: ELAV-like protein 4-like isoform 2 [Acyrthosiphon pisum]
Length = 392
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 58/75 (77%), Positives = 62/75 (82%), Gaps = 5/75 (6%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAAAA 70
+GFIRFDQRIEAERAIQELNGT+PKGS E ITVKFAN+P SSNK + LAAYLTPQ A
Sbjct: 175 VGFIRFDQRIEAERAIQELNGTVPKGSTESITVKFANNP-SSNKAVPALAAYLTPQ--GA 231
Query: 71 RRF-GGPIHH-AGRF 83
RRF GPIHH GRF
Sbjct: 232 RRFAAGPIHHPTGRF 246
>gi|391344304|ref|XP_003746441.1| PREDICTED: ELAV-like protein 4-like [Metaseiulus occidentalis]
Length = 394
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 61/74 (82%), Gaps = 5/74 (6%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAAAA 70
+GF+RFDQR+EAERAI+ L+ TIP+G+ E ITVKFAN+PS++ K IAPLAAYL+PQ
Sbjct: 197 VGFVRFDQRVEAERAIKHLHNTIPEGATEAITVKFANNPSNNAKAIAPLAAYLSPQ---- 252
Query: 71 RRFGGPIHH-AGRF 83
RRF GPIHH A RF
Sbjct: 253 RRFPGPIHHPANRF 266
>gi|195173668|ref|XP_002027609.1| GL22975 [Drosophila persimilis]
gi|194114534|gb|EDW36577.1| GL22975 [Drosophila persimilis]
Length = 385
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/75 (70%), Positives = 59/75 (78%), Gaps = 3/75 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK--VIAPLAAYLTPQAA 68
+GFIRFDQR EAERAIQELNG PKG EPITVKFAN+PS+S K + PL AYLTPQAA
Sbjct: 170 VGFIRFDQRNEAERAIQELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAA 229
Query: 69 AA-RRFGGPIHHAGR 82
AA RR G + +AGR
Sbjct: 230 AATRRLAGALPNAGR 244
>gi|347964852|ref|XP_309157.5| AGAP000965-PA [Anopheles gambiae str. PEST]
gi|333466508|gb|EAA04954.5| AGAP000965-PA [Anopheles gambiae str. PEST]
Length = 340
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/81 (65%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSS-NKVIAPLAAYL 63
T + +GFIRFDQR EAERAIQ+LNGT PKG++EPITVKFAN+PS++ NK I PLAAYL
Sbjct: 150 TGLSKGVGFIRFDQRSEAERAIQQLNGTTPKGASEPITVKFANNPSNNINKAIPPLAAYL 209
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
TP R GPIH +GRF
Sbjct: 210 TPTPNLRRFPPGPIHPLSGRF 230
>gi|198467583|ref|XP_002134579.1| GA22283 [Drosophila pseudoobscura pseudoobscura]
gi|198149314|gb|EDY73206.1| GA22283 [Drosophila pseudoobscura pseudoobscura]
Length = 353
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 53/75 (70%), Positives = 59/75 (78%), Gaps = 3/75 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK--VIAPLAAYLTPQAA 68
+GFIRFDQR EAERAIQELNG PKG EPITVKFAN+PS+S K + PL AYLTPQAA
Sbjct: 170 VGFIRFDQRNEAERAIQELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAA 229
Query: 69 AA-RRFGGPIHHAGR 82
AA RR G + +AGR
Sbjct: 230 AATRRLAGALPNAGR 244
>gi|170061963|ref|XP_001866463.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880034|gb|EDS43417.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 341
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSS-NKVIAPLAAYL 63
T + +GFIRFDQR EAERAIQ+LNGT PKG++EPITVKFAN+PS++ NK I PLAAYL
Sbjct: 151 TGLSKGVGFIRFDQRSEAERAIQQLNGTTPKGASEPITVKFANNPSNNINKAIPPLAAYL 210
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
TP R GPIH GRF
Sbjct: 211 TPTPNLRRFPPGPIHPLGGRF 231
>gi|194764023|ref|XP_001964131.1| GF21392 [Drosophila ananassae]
gi|190619056|gb|EDV34580.1| GF21392 [Drosophila ananassae]
Length = 353
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 53/75 (70%), Positives = 58/75 (77%), Gaps = 3/75 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK--VIAPLAAYLTPQAA 68
+GFIRFDQR EAERAIQELNG PKG EPITVKFAN+PS+S K + PL AYLTPQAA
Sbjct: 170 VGFIRFDQRNEAERAIQELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAA 229
Query: 69 AA-RRFGGPIHHAGR 82
AA RR G + AGR
Sbjct: 230 AATRRLAGALPSAGR 244
>gi|18860091|ref|NP_572842.1| found in neurons, isoform A [Drosophila melanogaster]
gi|161077787|ref|NP_001096965.1| found in neurons, isoform B [Drosophila melanogaster]
gi|386764326|ref|NP_001245646.1| found in neurons, isoform C [Drosophila melanogaster]
gi|386764332|ref|NP_001245648.1| found in neurons, isoform E [Drosophila melanogaster]
gi|386764334|ref|NP_001245649.1| found in neurons, isoform F [Drosophila melanogaster]
gi|442616163|ref|NP_001259497.1| found in neurons, isoform G [Drosophila melanogaster]
gi|442616165|ref|NP_001259498.1| found in neurons, isoform H [Drosophila melanogaster]
gi|7230770|gb|AAF43091.1|AF239667_1 putative RNA binding protein [Drosophila melanogaster]
gi|22833123|gb|AAF48215.3| found in neurons, isoform A [Drosophila melanogaster]
gi|158031803|gb|ABW09403.1| found in neurons, isoform B [Drosophila melanogaster]
gi|289666819|gb|ADD16464.1| RT06063p1 [Drosophila melanogaster]
gi|383293359|gb|AFH07360.1| found in neurons, isoform C [Drosophila melanogaster]
gi|383293361|gb|AFH07362.1| found in neurons, isoform E [Drosophila melanogaster]
gi|383293362|gb|AFH07363.1| found in neurons, isoform F [Drosophila melanogaster]
gi|440216716|gb|AGB95339.1| found in neurons, isoform G [Drosophila melanogaster]
gi|440216717|gb|AGB95340.1| found in neurons, isoform H [Drosophila melanogaster]
Length = 356
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 53/75 (70%), Positives = 58/75 (77%), Gaps = 3/75 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK--VIAPLAAYLTPQAA 68
+GFIRFDQR EAERAIQELNG PKG EPITVKFAN+PS+S K + PL AYLTPQAA
Sbjct: 173 VGFIRFDQRNEAERAIQELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAA 232
Query: 69 AA-RRFGGPIHHAGR 82
AA RR G + AGR
Sbjct: 233 AATRRLAGALPSAGR 247
>gi|195133062|ref|XP_002010958.1| GI16282 [Drosophila mojavensis]
gi|193906933|gb|EDW05800.1| GI16282 [Drosophila mojavensis]
Length = 353
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 53/75 (70%), Positives = 58/75 (77%), Gaps = 3/75 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK--VIAPLAAYLTPQAA 68
+GFIRFDQR EAERAIQELNG PKG EPITVKFAN+PS+S K + PL AYLTPQAA
Sbjct: 170 VGFIRFDQRNEAERAIQELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAA 229
Query: 69 AA-RRFGGPIHHAGR 82
AA RR G + AGR
Sbjct: 230 AATRRLAGALPSAGR 244
>gi|386764328|ref|NP_001245647.1| found in neurons, isoform D [Drosophila melanogaster]
gi|194895737|ref|XP_001978329.1| GG17743 [Drosophila erecta]
gi|195045911|ref|XP_001992055.1| GH24423 [Drosophila grimshawi]
gi|195397025|ref|XP_002057129.1| GJ16518 [Drosophila virilis]
gi|195447330|ref|XP_002071166.1| GK25647 [Drosophila willistoni]
gi|195478085|ref|XP_002100403.1| fne [Drosophila yakuba]
gi|190649978|gb|EDV47256.1| GG17743 [Drosophila erecta]
gi|193892896|gb|EDV91762.1| GH24423 [Drosophila grimshawi]
gi|194146896|gb|EDW62615.1| GJ16518 [Drosophila virilis]
gi|194167251|gb|EDW82152.1| GK25647 [Drosophila willistoni]
gi|194187927|gb|EDX01511.1| fne [Drosophila yakuba]
gi|307344716|gb|ADN43900.1| RT06051p [Drosophila melanogaster]
gi|383293360|gb|AFH07361.1| found in neurons, isoform D [Drosophila melanogaster]
Length = 353
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 53/75 (70%), Positives = 58/75 (77%), Gaps = 3/75 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK--VIAPLAAYLTPQAA 68
+GFIRFDQR EAERAIQELNG PKG EPITVKFAN+PS+S K + PL AYLTPQAA
Sbjct: 170 VGFIRFDQRNEAERAIQELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAA 229
Query: 69 AA-RRFGGPIHHAGR 82
AA RR G + AGR
Sbjct: 230 AATRRLAGALPSAGR 244
>gi|157126547|ref|XP_001660922.1| hypothetical protein AaeL_AAEL010567 [Aedes aegypti]
gi|108873228|gb|EAT37453.1| AAEL010567-PA, partial [Aedes aegypti]
Length = 384
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSS-NKVIAPLAAY 62
T + +GFIRFDQR EAERAIQ+LNGT PKG++EPITVKFAN+PS++ NK I PLAAY
Sbjct: 193 ITGLSKGVGFIRFDQRSEAERAIQQLNGTTPKGASEPITVKFANNPSNNINKAIPPLAAY 252
Query: 63 LTPQAAAARRFGGPIH-HAGRF 83
LTP R GPIH +GRF
Sbjct: 253 LTPTPNLRRFPPGPIHPLSGRF 274
>gi|195352738|ref|XP_002042868.1| GM11591 [Drosophila sechellia]
gi|194126915|gb|EDW48958.1| GM11591 [Drosophila sechellia]
Length = 379
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK--VIAPLAA 61
+ + +GFIRFDQR EAERAIQELNG PKG EPITVKFAN+PS+S K + PL A
Sbjct: 189 ISGLSKGVGFIRFDQRNEAERAIQELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTA 248
Query: 62 YLTPQAAAA-RRFGGPIHHAGRF 83
YLTPQAAAA RR G + AGR
Sbjct: 249 YLTPQAAAATRRLAGALPSAGRI 271
>gi|195566472|ref|XP_002106804.1| GD17091 [Drosophila simulans]
gi|194204196|gb|EDX17772.1| GD17091 [Drosophila simulans]
Length = 371
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK--VIAPLAA 61
+ + +GFIRFDQR EAERAIQELNG PKG EPITVKFAN+PS+S K + PL A
Sbjct: 166 ISGLSKGVGFIRFDQRNEAERAIQELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTA 225
Query: 62 YLTPQAAAA-RRFGGPIHHAGRF 83
YLTPQAAAA RR G + AGR
Sbjct: 226 YLTPQAAAATRRLAGALPSAGRI 248
>gi|226875175|gb|ACO88935.1| Elav [Octopus bimaculoides]
Length = 283
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 64/83 (77%), Gaps = 9/83 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPL---AA 61
T + +GFIRFDQRIEAERAIQ+L+GTIP+G+ EPITVKFANSP SSNK PL A+
Sbjct: 159 TGLSKGVGFIRFDQRIEAERAIQKLHGTIPEGATEPITVKFANSP-SSNKNAVPLALAAS 217
Query: 62 YLTPQAAAARRFGGPIHH-AGRF 83
YL+P +RR GPIHH AGRF
Sbjct: 218 YLSP----SRRIFGPIHHAAGRF 236
>gi|312370698|gb|EFR19033.1| hypothetical protein AND_23174 [Anopheles darlingi]
Length = 468
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/64 (71%), Positives = 55/64 (85%), Gaps = 1/64 (1%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T + +GFIRFDQR+EAE+AI+ELNGT+PKGS EPITVKFAN+PSS+ K + PLAAYL
Sbjct: 289 TGLSKGVGFIRFDQRMEAEKAIKELNGTVPKGSTEPITVKFANNPSST-KTVPPLAAYLG 347
Query: 65 PQAA 68
PQAA
Sbjct: 348 PQAA 351
>gi|321475411|gb|EFX86374.1| hypothetical protein DAPPUDRAFT_98025 [Daphnia pulex]
Length = 335
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 59/83 (71%), Gaps = 10/83 (12%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYL------- 63
+GFIRFD R EAERAI++LNGT+P+G+ EPITVKFAN+PS+S K +APLAAYL
Sbjct: 120 VGFIRFDTRGEAERAIEKLNGTVPQGATEPITVKFANNPSNSTKGLAPLAAYLPEFSSGA 179
Query: 64 ---TPQAAAARRFGGPIHHAGRF 83
A RRFGGPIH GR
Sbjct: 180 AAAAAAALGVRRFGGPIHPTGRL 202
>gi|241608253|ref|XP_002406562.1| conserved hypothetical protein [Ixodes scapularis]
gi|215502676|gb|EEC12170.1| conserved hypothetical protein [Ixodes scapularis]
Length = 270
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 63/83 (75%), Gaps = 7/83 (8%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPK--GSNEPITVKFANSPSSSNKVIAPLAA 61
T + +GF+RFDQR+EAERAI+ L+ ++P G+ EPITVKFAN+PS++ K IAPLAA
Sbjct: 84 ITGLSKGVGFVRFDQRVEAERAIKHLHNSVPADGGATEPITVKFANNPSNNAKAIAPLAA 143
Query: 62 YLTPQAAAARRFGGPIHH-AGRF 83
YL+PQ RRF GPIHH A RF
Sbjct: 144 YLSPQ----RRFPGPIHHPANRF 162
>gi|143346991|gb|ABO93208.1| Elav [Platynereis dumerilii]
Length = 361
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 64/82 (78%), Gaps = 7/82 (8%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSS-NKV-IAPLAAY 62
T + +GFIRFDQR+EAERAI++LNG +P+G+ EPITVKFAN+PSS+ N++ I +A Y
Sbjct: 173 TGLSKGVGFIRFDQRVEAERAIKQLNGKVPEGATEPITVKFANAPSSNKNQLPITAMATY 232
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
L+P RRF GPIHH AGRF
Sbjct: 233 LSP----TRRFLGPIHHPAGRF 250
>gi|410129791|dbj|BAM64857.1| RNA binding protein Elav, partial [Lamellibrachia satsuma]
Length = 153
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 61/83 (73%), Gaps = 8/83 (9%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKV--IAPLAAY 62
T + +GFIRFDQR EAERAI++LNGTIP+G+ EPITVKFANSPSS+ I +A Y
Sbjct: 47 TRISKGVGFIRFDQRHEAERAIKQLNGTIPEGATEPITVKFANSPSSNKNFLPIQAMAQY 106
Query: 63 LTPQAAAARRFGGPIHH--AGRF 83
LTP RRF GPIHH AGRF
Sbjct: 107 LTP----TRRFLGPIHHHPAGRF 125
>gi|295871070|gb|ADG49460.1| CG4396 [Drosophila simulans]
gi|295871072|gb|ADG49461.1| CG4396 [Drosophila simulans]
gi|295871074|gb|ADG49462.1| CG4396 [Drosophila simulans]
gi|295871076|gb|ADG49463.1| CG4396 [Drosophila simulans]
gi|295871078|gb|ADG49464.1| CG4396 [Drosophila simulans]
gi|295871080|gb|ADG49465.1| CG4396 [Drosophila simulans]
gi|295871082|gb|ADG49466.1| CG4396 [Drosophila simulans]
gi|295871084|gb|ADG49467.1| CG4396 [Drosophila simulans]
gi|295871086|gb|ADG49468.1| CG4396 [Drosophila simulans]
gi|295871088|gb|ADG49469.1| CG4396 [Drosophila simulans]
gi|295871090|gb|ADG49470.1| CG4396 [Drosophila simulans]
gi|295871092|gb|ADG49471.1| CG4396 [Drosophila simulans]
gi|295871094|gb|ADG49472.1| CG4396 [Drosophila simulans]
gi|295871096|gb|ADG49473.1| CG4396 [Drosophila simulans]
gi|295871098|gb|ADG49474.1| CG4396 [Drosophila simulans]
gi|295871100|gb|ADG49475.1| CG4396 [Drosophila simulans]
gi|295871102|gb|ADG49476.1| CG4396 [Drosophila simulans]
gi|295871104|gb|ADG49477.1| CG4396 [Drosophila simulans]
gi|295871106|gb|ADG49478.1| CG4396 [Drosophila simulans]
gi|295871108|gb|ADG49479.1| CG4396 [Drosophila simulans]
gi|295871110|gb|ADG49480.1| CG4396 [Drosophila simulans]
gi|295871112|gb|ADG49481.1| CG4396 [Drosophila simulans]
gi|295871114|gb|ADG49482.1| CG4396 [Drosophila simulans]
gi|295871116|gb|ADG49483.1| CG4396 [Drosophila simulans]
gi|295871118|gb|ADG49484.1| CG4396 [Drosophila melanogaster]
gi|295871120|gb|ADG49485.1| CG4396 [Drosophila melanogaster]
gi|295871122|gb|ADG49486.1| CG4396 [Drosophila melanogaster]
gi|295871124|gb|ADG49487.1| CG4396 [Drosophila melanogaster]
gi|295871126|gb|ADG49488.1| CG4396 [Drosophila melanogaster]
gi|295871128|gb|ADG49489.1| CG4396 [Drosophila melanogaster]
gi|295871130|gb|ADG49490.1| CG4396 [Drosophila melanogaster]
gi|295871132|gb|ADG49491.1| CG4396 [Drosophila melanogaster]
gi|295871134|gb|ADG49492.1| CG4396 [Drosophila melanogaster]
gi|295871136|gb|ADG49493.1| CG4396 [Drosophila melanogaster]
gi|295871138|gb|ADG49494.1| CG4396 [Drosophila melanogaster]
gi|295871140|gb|ADG49495.1| CG4396 [Drosophila melanogaster]
gi|295871142|gb|ADG49496.1| CG4396 [Drosophila melanogaster]
gi|295871144|gb|ADG49497.1| CG4396 [Drosophila melanogaster]
gi|295871146|gb|ADG49498.1| CG4396 [Drosophila melanogaster]
gi|295871148|gb|ADG49499.1| CG4396 [Drosophila melanogaster]
gi|295871150|gb|ADG49500.1| CG4396 [Drosophila melanogaster]
gi|295871152|gb|ADG49501.1| CG4396 [Drosophila melanogaster]
gi|295871154|gb|ADG49502.1| CG4396 [Drosophila melanogaster]
gi|295871156|gb|ADG49503.1| CG4396 [Drosophila melanogaster]
gi|295871158|gb|ADG49504.1| CG4396 [Drosophila melanogaster]
gi|295871160|gb|ADG49505.1| CG4396 [Drosophila melanogaster]
gi|295871162|gb|ADG49506.1| CG4396 [Drosophila melanogaster]
Length = 123
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK--VIAPLAA 61
+ + +GFIRFDQR EAERAIQELNG PKG EPITVKFAN+PS+S K + PL A
Sbjct: 46 ISGLSKGVGFIRFDQRNEAERAIQELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTA 105
Query: 62 YLTPQAAAA-RRFGGPI 77
YLTPQAAAA RR G +
Sbjct: 106 YLTPQAAAATRRLAGAL 122
>gi|341871451|gb|AEK99643.1| ElaV [Pomatoceros lamarckii]
Length = 212
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 63/93 (67%), Gaps = 14/93 (15%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN--------KVI 56
T + +GFIRFDQR EAERAI+ LNGTIP+G+ EPITVKFANSPSS+ V
Sbjct: 75 TGISKGVGFIRFDQRFEAERAIKMLNGTIPEGATEPITVKFANSPSSTKASMIAGTPTVT 134
Query: 57 APLAAYLT-PQAAA----ARRFGGPIHH-AGRF 83
A +A+YLT PQ+ A AR GPIHH A RF
Sbjct: 135 AAMASYLTAPQSTAAAQQARGLLGPIHHPANRF 167
>gi|195434178|ref|XP_002065080.1| GK14865 [Drosophila willistoni]
gi|194161165|gb|EDW76066.1| GK14865 [Drosophila willistoni]
Length = 725
Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 42/62 (67%), Positives = 50/62 (80%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAAAA 70
+GFIRFDQR EA+RAI+ELNGT PK S EPITVKFAN+PSS+ + PLAAY+ PQ+A
Sbjct: 255 VGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYIAPQSARG 314
Query: 71 RR 72
R
Sbjct: 315 GR 316
>gi|194758473|ref|XP_001961486.1| GF14992 [Drosophila ananassae]
gi|190615183|gb|EDV30707.1| GF14992 [Drosophila ananassae]
Length = 660
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
+ +GFIRFDQR EA+RAI+ELNGT PK S EPITVKFAN+PSS+ + PLAAY+ PQ
Sbjct: 228 LSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYIAPQ 287
Query: 67 AAAARR 72
A R
Sbjct: 288 NARGGR 293
>gi|442625619|ref|NP_001259974.1| RNA-binding protein 9, isoform J [Drosophila melanogaster]
gi|440213243|gb|AGB92511.1| RNA-binding protein 9, isoform J [Drosophila melanogaster]
Length = 684
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 49/63 (77%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYL 63
T + +GFIRFDQR EA+RAI+ELNGT PK S EPITVKFAN+PSS+ + PLAAY+
Sbjct: 232 ITGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYI 291
Query: 64 TPQ 66
PQ
Sbjct: 292 APQ 294
>gi|195051457|ref|XP_001993098.1| GH13638 [Drosophila grimshawi]
gi|193900157|gb|EDV99023.1| GH13638 [Drosophila grimshawi]
Length = 726
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 49/63 (77%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYL 63
T + +GFIRFDQR EA+RAI+ELNGT PK S EPITVKFAN+PSS+ + PLAAY+
Sbjct: 235 ITGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYI 294
Query: 64 TPQ 66
PQ
Sbjct: 295 APQ 297
>gi|19549690|ref|NP_599125.1| RNA-binding protein 9, isoform E [Drosophila melanogaster]
gi|19549692|ref|NP_599126.1| RNA-binding protein 9, isoform F [Drosophila melanogaster]
gi|62471589|ref|NP_001014462.1| RNA-binding protein 9, isoform G [Drosophila melanogaster]
gi|221330652|ref|NP_476936.3| RNA-binding protein 9, isoform H [Drosophila melanogaster]
gi|158227|gb|AAC13646.1| RNA-binding protein [Drosophila melanogaster]
gi|22945352|gb|AAN10402.1| RNA-binding protein 9, isoform E [Drosophila melanogaster]
gi|22945353|gb|AAN10403.1| RNA-binding protein 9, isoform F [Drosophila melanogaster]
gi|40714603|gb|AAR88559.1| GH26440p [Drosophila melanogaster]
gi|61678275|gb|AAX52651.1| RNA-binding protein 9, isoform G [Drosophila melanogaster]
gi|220901921|gb|AAN10401.3| RNA-binding protein 9, isoform H [Drosophila melanogaster]
gi|220951536|gb|ACL88311.1| Rbp9-PE [synthetic construct]
Length = 439
Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/68 (61%), Positives = 50/68 (73%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T + +GFIRFDQR EA+RAI+ELNGT PK S EPITVKFAN+PSS+ + PLAAY+
Sbjct: 233 TGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYIA 292
Query: 65 PQAAAARR 72
PQ R
Sbjct: 293 PQNTRGGR 300
>gi|195116106|ref|XP_002002597.1| GI11879 [Drosophila mojavensis]
gi|193913172|gb|EDW12039.1| GI11879 [Drosophila mojavensis]
Length = 724
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 48/60 (80%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
+ +GFIRFDQR EA+RAI+ELNGT PK S EPITVKFAN+PSS+ + PLAAY+ PQ
Sbjct: 254 LSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYIAPQ 313
>gi|195384832|ref|XP_002051116.1| GJ13991 [Drosophila virilis]
gi|194147573|gb|EDW63271.1| GJ13991 [Drosophila virilis]
Length = 725
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 48/60 (80%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
+ +GFIRFDQR EA+RAI+ELNGT PK S EPITVKFAN+PSS+ + PLAAY+ PQ
Sbjct: 232 LSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYIAPQ 291
>gi|19549688|ref|NP_599124.1| RNA-binding protein 9, isoform B [Drosophila melanogaster]
gi|19549694|ref|NP_599127.1| RNA-binding protein 9, isoform C [Drosophila melanogaster]
gi|221330653|ref|NP_476937.3| RNA-binding protein 9, isoform I [Drosophila melanogaster]
gi|158226|gb|AAC13645.1| RNA-binding protein [Drosophila melanogaster]
gi|22945349|gb|AAF51177.2| RNA-binding protein 9, isoform B [Drosophila melanogaster]
gi|22945350|gb|AAF51178.2| RNA-binding protein 9, isoform C [Drosophila melanogaster]
gi|220901922|gb|AAF51179.4| RNA-binding protein 9, isoform I [Drosophila melanogaster]
Length = 444
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/62 (66%), Positives = 48/62 (77%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAAAA 70
+GFIRFDQR EA+RAI+ELNGT PK S EPITVKFAN+PSS+ + PLAAY+ PQ
Sbjct: 244 VGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYIAPQNTRG 303
Query: 71 RR 72
R
Sbjct: 304 GR 305
>gi|124248380|gb|ABM92810.1| IP15810p [Drosophila melanogaster]
Length = 647
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/62 (66%), Positives = 48/62 (77%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAAAA 70
+GFIRFDQR EA+RAI+ELNGT PK S EPITVKFAN+PSS+ + PLAAY+ PQ
Sbjct: 447 VGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYIAPQNTRG 506
Query: 71 RR 72
R
Sbjct: 507 GR 508
>gi|198473023|ref|XP_002133161.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
gi|198139264|gb|EDY70563.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
Length = 692
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 48/60 (80%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
+ +GFIRFDQR EA+RAI+ELNGT PK S EPITVKFAN+PSS+ + PLAAY+ PQ
Sbjct: 249 LSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYIAPQ 308
>gi|7322081|gb|AAB25519.2| RRM9 [Drosophila melanogaster]
Length = 444
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 48/60 (80%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
+ +GFIRFDQR EA+RAI+ELNGT PK S EPITVKFAN+PSS+ + PLAAY+ PQ
Sbjct: 240 LSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYIAPQ 299
>gi|260821286|ref|XP_002605964.1| hypothetical protein BRAFLDRAFT_92208 [Branchiostoma floridae]
gi|229291301|gb|EEN61974.1| hypothetical protein BRAFLDRAFT_92208 [Branchiostoma floridae]
Length = 330
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 55/76 (72%), Gaps = 5/76 (6%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R +GF+RFDQR+EAERAI ELNG IPKG+ +PITVKFAN+PS ++ AAYL P
Sbjct: 154 RGVGFVRFDQRVEAERAITELNGHIPKGATDPITVKFANNPSQNHAKALQQAAYLAP--- 210
Query: 69 AARRFGGP-IHHAGRF 83
ARR+ GP +H RF
Sbjct: 211 -ARRYLGPMLHQTARF 225
>gi|195161932|ref|XP_002021810.1| GL26299 [Drosophila persimilis]
gi|194103610|gb|EDW25653.1| GL26299 [Drosophila persimilis]
Length = 678
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 42/68 (61%), Positives = 50/68 (73%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T + +GFIRFDQR EA+RAI+ELNGT PK S EPITVKFAN+PSS+ + PLAAY+
Sbjct: 233 TGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYIA 292
Query: 65 PQAAAARR 72
PQ R
Sbjct: 293 PQNTRGGR 300
>gi|15021899|dbj|BAB62225.1| Hu/elav class neuron-specific RNA binding protein [Branchiostoma
belcheri]
Length = 326
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 55/76 (72%), Gaps = 5/76 (6%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R +GF+RFDQR+EAERAI ELNG IPKG+ +PITVKFAN+PS ++ AAYL P
Sbjct: 150 RGVGFVRFDQRVEAERAITELNGHIPKGATDPITVKFANNPSQNHAKALQQAAYLAP--- 206
Query: 69 AARRFGGP-IHHAGRF 83
ARR+ GP +H RF
Sbjct: 207 -ARRYLGPMLHQTARF 221
>gi|195470919|ref|XP_002087754.1| GE18193 [Drosophila yakuba]
gi|194173855|gb|EDW87466.1| GE18193 [Drosophila yakuba]
Length = 446
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 48/60 (80%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
+ +GFIRFDQR EA+RAI+ELNGT PK S EPITVKFAN+PSS+ + PLAAY+ PQ
Sbjct: 242 LSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYIAPQ 301
>gi|194855197|ref|XP_001968493.1| GG24901 [Drosophila erecta]
gi|190660360|gb|EDV57552.1| GG24901 [Drosophila erecta]
Length = 446
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 48/60 (80%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
+ +GFIRFDQR EA+RAI+ELNGT PK S EPITVKFAN+PSS+ + PLAAY+ PQ
Sbjct: 242 LSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYIAPQ 301
>gi|195342135|ref|XP_002037657.1| GM18380 [Drosophila sechellia]
gi|194132507|gb|EDW54075.1| GM18380 [Drosophila sechellia]
Length = 650
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/62 (66%), Positives = 48/62 (77%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAAAA 70
+GFIRFDQR EA+RAI+ELNGT PK S EPITVKFAN+PSS+ + PLAAY+ PQ
Sbjct: 450 VGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYIAPQNTRG 509
Query: 71 RR 72
R
Sbjct: 510 GR 511
>gi|16648054|gb|AAL25292.1| GH07919p [Drosophila melanogaster]
Length = 238
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 47/56 (83%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
+GFIRFDQR EA+RAI+ELNGT PK S EPITVKFAN+PSS+ + PLAAY+ PQ
Sbjct: 38 VGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYIAPQ 93
>gi|357619997|gb|EHJ72347.1| hypothetical protein KGM_14614 [Danaus plexippus]
Length = 320
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 2 KGFTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAA 61
+G R + FIR+DQRIEAE AI+ELNGTIP G PITVK AN+PS+ NK +APLA
Sbjct: 133 QGIQGPSRGVAFIRYDQRIEAENAIRELNGTIPPGGTGPITVKCANNPSNQNKALAPLAT 192
Query: 62 YLTPQAAAARRFGGP 76
YL P RRF GP
Sbjct: 193 YLAP--PTVRRFLGP 205
>gi|315488446|gb|ADU32858.1| ELAV [Branchiostoma lanceolatum]
Length = 165
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 55/76 (72%), Gaps = 5/76 (6%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R +GF+RFDQR+EAERAI ELNG IPKG+ +PITVKFAN+PS ++ AAYL P
Sbjct: 8 RGVGFVRFDQRVEAERAITELNGHIPKGATDPITVKFANNPSQNHAKALQQAAYLAP--- 64
Query: 69 AARRFGGP-IHHAGRF 83
ARR+ GP +H RF
Sbjct: 65 -ARRYLGPMLHQTARF 79
>gi|443724444|gb|ELU12456.1| hypothetical protein CAPTEDRAFT_172701 [Capitella teleta]
Length = 359
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 59/90 (65%), Gaps = 14/90 (15%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVI-APLAA-- 61
T + +GFIRFDQR EAERAI+ LNGTIP+G+ +PITVKFA PSS+ ++ P A
Sbjct: 151 TGISKGVGFIRFDQRHEAERAIKMLNGTIPEGATDPITVKFAQHPSSAKNILQVPAVAAS 210
Query: 62 -------YLTPQAAAARRFGGPIHH-AGRF 83
YL P AARRF GPIHH GRF
Sbjct: 211 ATTNPTQYLAP---AARRFLGPIHHPTGRF 237
>gi|389612935|dbj|BAM19862.1| RNA-binding protein [Papilio xuthus]
Length = 360
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R + FIR+DQR EAE AI+ELNGTIP G P+TVK AN+PS+ K +APLAAYLTP
Sbjct: 180 RGVAFIRYDQRCEAEAAIRELNGTIPPGGTGPMTVKCANNPSNQTKGLAPLAAYLTPN-- 237
Query: 69 AARRFGGP 76
+ RRF GP
Sbjct: 238 STRRFVGP 245
>gi|357617939|gb|EHJ71078.1| putative RNA-binding protein [Danaus plexippus]
Length = 397
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 44/52 (84%)
Query: 3 GFTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK 54
G + +GFIRFDQR+EAERAIQELNGT+PKG+ EPITVKFAN+PS++ K
Sbjct: 161 GEQGLSKGVGFIRFDQRVEAERAIQELNGTVPKGATEPITVKFANNPSNNGK 212
>gi|345433354|dbj|BAK69334.1| RNA binding protein Elav [Balanoglossus simodensis]
Length = 233
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ NG IP G+ +PITVKFAN+P S N A AYL
Sbjct: 85 TGLSRGVGFIRFDRRIEAEEAIKRFNGKIPAGAIDPITVKFANNP-SQNHAKALQQAYL- 142
Query: 65 PQAAAARRFGGPIHHAGR 82
A+ RR+ GP+HH R
Sbjct: 143 --ASPTRRYPGPLHHQAR 158
>gi|242531301|gb|ACS92975.1| Elav [Ptychodera flava]
Length = 216
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ NG IP G+ +PITVKFAN+P S N A AYL
Sbjct: 68 TGLSRGVGFIRFDRRIEAEEAIKRFNGKIPNGAIDPITVKFANNP-SQNHAKALQQAYL- 125
Query: 65 PQAAAARRFGGPIHHAGR 82
A+ RR+ GP+HH R
Sbjct: 126 --ASPTRRYPGPLHHQTR 141
>gi|410967448|ref|XP_003990231.1| PREDICTED: ELAV-like protein 4 [Felis catus]
Length = 494
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 186 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 243
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 244 QSPN----RRYPGPLHHQAQRF 261
>gi|393909831|gb|EFO16801.2| RNA-binding protein [Loa loa]
Length = 414
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK---------- 54
T + +GF+RFD++ EAE AI++LNG IP G EPITVKFANSP+++ +
Sbjct: 172 TGISKGVGFVRFDRKSEAEDAIEKLNGKIPAGCTEPITVKFANSPAANAQKAQLQIAQAA 231
Query: 55 -VIAPLAAYLTPQAAAARRFG-GPIHH---AGRF 83
+ PLA + A + RR G GPIHH AGRF
Sbjct: 232 SALMPLALLSSISATSGRRIGAGPIHHTPQAGRF 265
>gi|312092240|ref|XP_003147268.1| RNA-binding protein [Loa loa]
Length = 383
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK---------- 54
T + +GF+RFD++ EAE AI++LNG IP G EPITVKFANSP+++ +
Sbjct: 141 TGISKGVGFVRFDRKSEAEDAIEKLNGKIPAGCTEPITVKFANSPAANAQKAQLQIAQAA 200
Query: 55 -VIAPLAAYLTPQAAAARRFG-GPIHH---AGRF 83
+ PLA + A + RR G GPIHH AGRF
Sbjct: 201 SALMPLALLSSISATSGRRIGAGPIHHTPQAGRF 234
>gi|347966748|ref|XP_321180.5| AGAP001883-PA [Anopheles gambiae str. PEST]
gi|333469916|gb|EAA01735.5| AGAP001883-PA [Anopheles gambiae str. PEST]
Length = 396
Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 6/72 (8%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSP--SSSNKVIAP-LAAYLTPQA 67
+GFIRFDQR EAERAIQ LNGT PKG +PITVKF+N+P +++ KV+ P L A+L PQ
Sbjct: 210 VGFIRFDQRKEAERAIQALNGTTPKGLTDPITVKFSNTPGQNAAAKVVQPALPAFLNPQ- 268
Query: 68 AAARRFGGPIHH 79
RR G IHH
Sbjct: 269 -LTRRLGA-IHH 278
>gi|395730526|ref|XP_003775742.1| PREDICTED: ELAV-like protein 4 [Pongo abelii]
Length = 402
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 205 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 262
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 263 QSPN----RRYPGPLHHQAQRF 280
>gi|390465922|ref|XP_003733491.1| PREDICTED: ELAV-like protein 4 isoform 4 [Callithrix jacchus]
gi|403258121|ref|XP_003921627.1| PREDICTED: ELAV-like protein 4 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 402
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 205 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 262
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 263 QSPN----RRYPGPLHHQAQRF 280
>gi|221042398|dbj|BAH12876.1| unnamed protein product [Homo sapiens]
Length = 332
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 135 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 192
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 193 QSPN----RRYPGPLHHQAQRF 210
>gi|332219807|ref|XP_003259049.1| PREDICTED: ELAV-like protein 4 isoform 4 [Nomascus leucogenys]
gi|332808951|ref|XP_001135610.2| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 10 [Pan troglodytes]
gi|397518906|ref|XP_003829616.1| PREDICTED: ELAV-like protein 4 isoform 3 [Pan paniscus]
gi|402854509|ref|XP_003891910.1| PREDICTED: ELAV-like protein 4 isoform 4 [Papio anubis]
gi|426329579|ref|XP_004025816.1| PREDICTED: ELAV-like protein 4 isoform 4 [Gorilla gorilla gorilla]
gi|119627246|gb|EAX06841.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_a [Homo sapiens]
Length = 402
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 205 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 262
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 263 QSPN----RRYPGPLHHQAQRF 280
>gi|291398930|ref|XP_002715153.1| PREDICTED: ELAV-like 4-like isoform 4 [Oryctolagus cuniculus]
Length = 402
Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 205 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 262
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 263 QSPN----RRYPGPLHHQAQRF 280
>gi|170591004|ref|XP_001900261.1| RNA-binding protein [Brugia malayi]
gi|158592411|gb|EDP31011.1| RNA-binding protein, putative [Brugia malayi]
Length = 417
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 15/94 (15%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK---------- 54
T + +GF+RFD++ EAE AI +LNG IP G EPITVKFANSP+++ +
Sbjct: 172 TGISKGVGFVRFDRKSEAEDAIDKLNGKIPAGCTEPITVKFANSPAANAQKAQLQIAQAA 231
Query: 55 -VIAPLAAYLTPQAAAARRFG-GPIHH---AGRF 83
+ PLA + A + RR G GPIHH AGRF
Sbjct: 232 SALMPLALLSSISATSGRRIGAGPIHHTPQAGRF 265
>gi|344278909|ref|XP_003411234.1| PREDICTED: ELAV-like protein 4-like [Loxodonta africana]
Length = 419
Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 222 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 279
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 280 QSPN----RRYPGPLHHQAQRF 297
>gi|444726522|gb|ELW67052.1| ELAV-like protein 4 [Tupaia chinensis]
Length = 423
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 226 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 283
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 284 QSPN----RRYPGPLHHQAQRF 301
>gi|402587503|gb|EJW81438.1| hypothetical protein WUBG_07656, partial [Wuchereria bancrofti]
Length = 337
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 57/95 (60%), Gaps = 15/95 (15%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK--------- 54
T + +GF+RFD++ EAE AI +LNG IP G EPITVKFANSP+++ +
Sbjct: 207 VTGISKGVGFVRFDRKSEAEDAIDKLNGKIPAGCTEPITVKFANSPAANAQKAQLQIAQA 266
Query: 55 --VIAPLAAYLTPQAAAARRFG-GPIHH---AGRF 83
+ PLA + A + RR G GPIHH AGRF
Sbjct: 267 ASALMPLALLSSISATSGRRIGAGPIHHTPQAGRF 301
>gi|327271181|ref|XP_003220366.1| PREDICTED: ELAV-like protein 4-like [Anolis carolinensis]
Length = 410
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 213 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKTSQALLSQLYQS 272
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P RR+ GP+HH A RF
Sbjct: 273 PN----RRYPGPLHHQAQRF 288
>gi|395512536|ref|XP_003775304.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3 [Sarcophilus
harrisii]
Length = 287
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYL 63
T R +GFIRFD+RIEAE AI+ LNG P G++EPITVKFAN+P S K L +L
Sbjct: 163 VTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFANNP--SQKTGQALLTHL 220
Query: 64 TPQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 221 Y--QSSARRYAGPLHH 234
>gi|297664979|ref|XP_002810890.1| PREDICTED: ELAV-like protein 4 isoform 3 [Pongo abelii]
Length = 371
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 174 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 231
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 232 QSPN----RRYPGPLHHQAQRF 249
>gi|395855039|ref|XP_003799979.1| PREDICTED: ELAV-like protein 4 isoform 2 [Otolemur garnettii]
Length = 383
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 186 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 243
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 244 QSPN----RRYPGPLHHQAQRF 261
>gi|390465918|ref|XP_003733489.1| PREDICTED: ELAV-like protein 4 isoform 2 [Callithrix jacchus]
gi|403258117|ref|XP_003921625.1| PREDICTED: ELAV-like protein 4 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 371
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 174 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 231
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 232 QSPN----RRYPGPLHHQAQRF 249
>gi|114556468|ref|XP_001135779.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 12 [Pan troglodytes]
gi|332219801|ref|XP_003259046.1| PREDICTED: ELAV-like protein 4 isoform 1 [Nomascus leucogenys]
gi|395855041|ref|XP_003799980.1| PREDICTED: ELAV-like protein 4 isoform 3 [Otolemur garnettii]
gi|397518902|ref|XP_003829614.1| PREDICTED: ELAV-like protein 4 isoform 1 [Pan paniscus]
gi|402854503|ref|XP_003891907.1| PREDICTED: ELAV-like protein 4 isoform 1 [Papio anubis]
gi|426329573|ref|XP_004025813.1| PREDICTED: ELAV-like protein 4 isoform 1 [Gorilla gorilla gorilla]
gi|221042444|dbj|BAH12899.1| unnamed protein product [Homo sapiens]
gi|261860582|dbj|BAI46813.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like protein 4
[synthetic construct]
Length = 371
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 174 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 231
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 232 QSPN----RRYPGPLHHQAQRF 249
>gi|221316769|ref|NP_001138247.1| ELAV-like protein 4 isoform 3 [Homo sapiens]
gi|14280325|gb|AAK57539.1| HUD4 [Homo sapiens]
Length = 383
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 186 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 243
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 244 QSPN----RRYPGPLHHQAQRF 261
>gi|348554577|ref|XP_003463102.1| PREDICTED: ELAV-like protein 4 isoform 1 [Cavia porcellus]
gi|354468154|ref|XP_003496532.1| PREDICTED: ELAV-like protein 4 isoform 2 [Cricetulus griseus]
Length = 383
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 186 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 243
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 244 QSPN----RRYPGPLHHQAQRF 261
>gi|312380126|gb|EFR26210.1| hypothetical protein AND_07855 [Anopheles darlingi]
Length = 388
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 6/72 (8%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSP--SSSNKVIAP-LAAYLTPQA 67
+GFIRFDQR EAERAIQ LNGT PKG +PITVKF+N+P +++ KV+ P L A+L PQ
Sbjct: 202 VGFIRFDQRKEAERAIQALNGTTPKGLTDPITVKFSNTPGQNAAAKVVQPALPAFLNPQ- 260
Query: 68 AAARRFGGPIHH 79
RR G IHH
Sbjct: 261 -LTRRLGA-IHH 270
>gi|194207476|ref|XP_001492529.2| PREDICTED: ELAV-like protein 4 isoform 2 [Equus caballus]
Length = 383
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 186 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 243
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 244 QSPN----RRYPGPLHHQAQRF 261
>gi|12851808|dbj|BAB29173.1| unnamed protein product [Mus musculus]
Length = 371
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 174 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 231
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 232 QSPN----RRYPGPLHHQAQRF 249
>gi|254281262|ref|NP_001156871.1| ELAV-like protein 4 isoform d [Mus musculus]
gi|73977013|ref|XP_860413.1| PREDICTED: ELAV-like protein 4 isoform 17 [Canis lupus familiaris]
gi|291398928|ref|XP_002715152.1| PREDICTED: ELAV-like 4-like isoform 3 [Oryctolagus cuniculus]
gi|354468152|ref|XP_003496531.1| PREDICTED: ELAV-like protein 4 isoform 1 [Cricetulus griseus]
gi|426215484|ref|XP_004002002.1| PREDICTED: ELAV-like protein 4 isoform 2 [Ovis aries]
Length = 371
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 174 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 231
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 232 QSPN----RRYPGPLHHQAQRF 249
>gi|338721769|ref|XP_003364429.1| PREDICTED: ELAV-like protein 4 [Equus caballus]
Length = 371
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 174 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 231
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 232 QSPN----RRYPGPLHHQAQRF 249
>gi|297275993|ref|XP_001092907.2| PREDICTED: ELAV-like protein 1 isoform 4 [Macaca mulatta]
Length = 387
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 202
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 203 P----ARRFGGPVHHQAQRF 218
>gi|297664981|ref|XP_002810891.1| PREDICTED: ELAV-like protein 4 isoform 4 [Pongo abelii]
Length = 366
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 226
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 227 QSPN----RRYPGPLHHQAQRF 244
>gi|390465920|ref|XP_003733490.1| PREDICTED: ELAV-like protein 4 isoform 3 [Callithrix jacchus]
gi|403258119|ref|XP_003921626.1| PREDICTED: ELAV-like protein 4 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 366
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 226
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 227 QSPN----RRYPGPLHHQAQRF 244
>gi|221316767|ref|NP_001138246.1| ELAV-like protein 4 isoform 2 [Homo sapiens]
gi|384475927|ref|NP_001245109.1| ELAV-like protein 4 [Macaca mulatta]
gi|114556464|ref|XP_001135692.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 11 [Pan troglodytes]
gi|332219803|ref|XP_003259047.1| PREDICTED: ELAV-like protein 4 isoform 2 [Nomascus leucogenys]
gi|395855037|ref|XP_003799978.1| PREDICTED: ELAV-like protein 4 isoform 1 [Otolemur garnettii]
gi|397518904|ref|XP_003829615.1| PREDICTED: ELAV-like protein 4 isoform 2 [Pan paniscus]
gi|402854505|ref|XP_003891908.1| PREDICTED: ELAV-like protein 4 isoform 2 [Papio anubis]
gi|426329575|ref|XP_004025814.1| PREDICTED: ELAV-like protein 4 isoform 2 [Gorilla gorilla gorilla]
gi|14280327|gb|AAK57540.1| HUD1 [Homo sapiens]
gi|380810346|gb|AFE77048.1| ELAV-like protein 4 isoform 2 [Macaca mulatta]
Length = 366
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 226
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 227 QSPN----RRYPGPLHHQAQRF 244
>gi|23271926|gb|AAH36071.1| ELAVL4 protein [Homo sapiens]
Length = 366
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 226
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 227 QSPN----RRYPGPLHHQAQRF 244
>gi|125991914|ref|NP_001075075.1| ELAV-like protein 4 [Bos taurus]
gi|73976985|ref|XP_859918.1| PREDICTED: ELAV-like protein 4 isoform 5 [Canis lupus familiaris]
gi|291398926|ref|XP_002715151.1| PREDICTED: ELAV-like 4-like isoform 2 [Oryctolagus cuniculus]
gi|301772324|ref|XP_002921582.1| PREDICTED: ELAV-like protein 4-like [Ailuropoda melanoleuca]
gi|426215482|ref|XP_004002001.1| PREDICTED: ELAV-like protein 4 isoform 1 [Ovis aries]
gi|124829171|gb|AAI33284.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Bos taurus]
gi|296489084|tpg|DAA31197.1| TPA: ELAV-like 4 [Bos taurus]
Length = 366
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 226
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 227 QSPN----RRYPGPLHHQAQRF 244
>gi|395730528|ref|XP_003775743.1| PREDICTED: ELAV-like protein 4 [Pongo abelii]
Length = 366
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 226
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 227 QSPN----RRYPGPLHHQAQRF 244
>gi|390465924|ref|XP_002750851.2| PREDICTED: ELAV-like protein 4 isoform 1 [Callithrix jacchus]
Length = 366
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 226
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 227 QSPN----RRYPGPLHHQAQRF 244
>gi|297664975|ref|XP_002810888.1| PREDICTED: ELAV-like protein 4 isoform 1 [Pongo abelii]
Length = 369
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 172 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 229
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 230 QSPN----RRYPGPLHHQAQRF 247
>gi|149693651|ref|XP_001492503.1| PREDICTED: ELAV-like protein 4 isoform 1 [Equus caballus]
Length = 366
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 226
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 227 QSPN----RRYPGPLHHQAQRF 244
>gi|119627249|gb|EAX06844.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_d [Homo sapiens]
Length = 365
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 168 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 225
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 226 QSPN----RRYPGPLHHQAQRF 243
>gi|221316771|ref|NP_001138248.1| ELAV-like protein 4 isoform 4 [Homo sapiens]
gi|114556460|ref|XP_001135439.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 8 [Pan troglodytes]
gi|332219809|ref|XP_003259050.1| PREDICTED: ELAV-like protein 4 isoform 5 [Nomascus leucogenys]
gi|395855043|ref|XP_003799981.1| PREDICTED: ELAV-like protein 4 isoform 4 [Otolemur garnettii]
gi|397518910|ref|XP_003829618.1| PREDICTED: ELAV-like protein 4 isoform 5 [Pan paniscus]
gi|402854511|ref|XP_003891911.1| PREDICTED: ELAV-like protein 4 isoform 5 [Papio anubis]
gi|426329581|ref|XP_004025817.1| PREDICTED: ELAV-like protein 4 isoform 5 [Gorilla gorilla gorilla]
gi|14280323|gb|AAK57538.1| HUD3 [Homo sapiens]
Length = 366
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 226
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 227 QSPN----RRYPGPLHHQAQRF 244
>gi|221316773|ref|NP_001138249.1| ELAV-like protein 4 isoform 5 [Homo sapiens]
gi|114556458|ref|XP_001135525.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 9 [Pan troglodytes]
gi|332219805|ref|XP_003259048.1| PREDICTED: ELAV-like protein 4 isoform 3 [Nomascus leucogenys]
gi|397518908|ref|XP_003829617.1| PREDICTED: ELAV-like protein 4 isoform 4 [Pan paniscus]
gi|402854507|ref|XP_003891909.1| PREDICTED: ELAV-like protein 4 isoform 3 [Papio anubis]
gi|426329577|ref|XP_004025815.1| PREDICTED: ELAV-like protein 4 isoform 3 [Gorilla gorilla gorilla]
gi|119627250|gb|EAX06845.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_e [Homo sapiens]
gi|221041752|dbj|BAH12553.1| unnamed protein product [Homo sapiens]
Length = 369
Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 172 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 229
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 230 QSPN----RRYPGPLHHQAQRF 247
>gi|45382273|ref|NP_990161.1| ELAV-like protein 4 [Gallus gallus]
gi|5739519|gb|AAD50508.1|AF176675_1 RNA-binding protein HuD [Gallus gallus]
Length = 371
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 174 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKTSQALLSQLYQS 233
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P RR+ GP+HH A RF
Sbjct: 234 PN----RRYPGPLHHQAQRF 249
>gi|224058156|ref|XP_002196701.1| PREDICTED: ELAV-like protein 4 [Taeniopygia guttata]
Length = 371
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 174 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKTSQALLSQLYQS 233
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P RR+ GP+HH A RF
Sbjct: 234 PN----RRYPGPLHHQAQRF 249
>gi|28879001|gb|AAH48159.1| Elavl4 protein [Mus musculus]
Length = 412
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 174 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 231
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 232 QSPN----RRYPGPLHHQAQRF 249
>gi|355745275|gb|EHH49900.1| hypothetical protein EGM_00635 [Macaca fascicularis]
Length = 289
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 186 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 243
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 244 QSPN----RRYPGPLHHQAQRF 261
>gi|351713507|gb|EHB16426.1| ELAV-like protein 4 [Heterocephalus glaber]
Length = 385
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 174 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 231
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 232 QSPN----RRYPGPLHHQAQRF 249
>gi|355557990|gb|EHH14770.1| hypothetical protein EGK_00744 [Macaca mulatta]
Length = 385
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 174 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 231
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 232 QSPN----RRYPGPLHHQAQRF 249
>gi|84662766|ref|NP_034618.2| ELAV-like protein 4 isoform a [Mus musculus]
gi|354468156|ref|XP_003496533.1| PREDICTED: ELAV-like protein 4 isoform 3 [Cricetulus griseus]
gi|2500580|sp|Q61701.1|ELAV4_MOUSE RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|603495|dbj|BAA06723.1| HuD [Mus musculus]
gi|440906869|gb|ELR57085.1| ELAV-like protein 4 [Bos grunniens mutus]
Length = 385
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 174 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 231
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 232 QSPN----RRYPGPLHHQAQRF 249
>gi|324512454|gb|ADY45159.1| ELAV-like protein 1 [Ascaris suum]
Length = 477
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 60/99 (60%), Gaps = 19/99 (19%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKV-------I 56
T + +GF+RFD++ EAE AI +LNGTIP G EP+TVKFAN+P+++ + +
Sbjct: 225 ITGLSKGVGFVRFDRKGEAEVAISKLNGTIPAGCTEPVTVKFANNPAANAQKAQLQVQDV 284
Query: 57 APLAAYLTPQ--------AAAARRFG-GPIHH---AGRF 83
A A+ L P AA RRFG GPIHH AGRF
Sbjct: 285 AQAASALMPLALLNTAAVAATGRRFGAGPIHHTPQAGRF 323
>gi|73977005|ref|XP_860272.1| PREDICTED: ELAV-like protein 4 isoform 15 [Canis lupus familiaris]
Length = 380
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 226
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 227 QSPN----RRYPGPLHHQAQRF 244
>gi|179537|gb|AAA58396.1| brain protein [Homo sapiens]
gi|14280329|gb|AAK57541.1| HUDPRO1 [Homo sapiens]
gi|119627247|gb|EAX06842.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_b [Homo sapiens]
Length = 380
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 226
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 227 QSPN----RRYPGPLHHQAQRF 244
>gi|334321530|ref|XP_001373647.2| PREDICTED: ELAV-like protein 4 isoform 1 [Monodelphis domestica]
Length = 366
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKTSQALLSQLYQS 228
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P RR+ GP+HH A RF
Sbjct: 229 PN----RRYPGPLHHQAQRF 244
>gi|390465926|ref|XP_003733492.1| PREDICTED: ELAV-like protein 4 isoform 5 [Callithrix jacchus]
gi|403258123|ref|XP_003921628.1| PREDICTED: ELAV-like protein 4 isoform 4 [Saimiri boliviensis
boliviensis]
Length = 380
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 226
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 227 QSPN----RRYPGPLHHQAQRF 244
>gi|297664977|ref|XP_002810889.1| PREDICTED: ELAV-like protein 4 isoform 2 [Pongo abelii]
Length = 380
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 226
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 227 QSPN----RRYPGPLHHQAQRF 244
>gi|345780791|ref|XP_859879.2| PREDICTED: ELAV-like protein 4 isoform 4 [Canis lupus familiaris]
Length = 364
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 167 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 224
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 225 QSPN----RRYPGPLHHQAQRF 242
>gi|149693653|ref|XP_001492549.1| PREDICTED: ELAV-like protein 4 isoform 3 [Equus caballus]
Length = 366
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 226
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 227 QSPN----RRYPGPLHHQAQRF 244
>gi|542846|pir||JC2116 hippocampal 38K autoantigen protein - human
gi|2340828|dbj|BAA21838.1| PLE21 protein [Homo sapiens]
Length = 350
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 153 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAREPITVKFANNP--SQKTGQALLTHL- 209
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 210 -YQSSARRYAGPLHH 223
>gi|73977009|ref|XP_532585.2| PREDICTED: ELAV-like protein 4 isoform 1 [Canis lupus familiaris]
gi|291398932|ref|XP_002715154.1| PREDICTED: ELAV-like 4-like isoform 5 [Oryctolagus cuniculus]
gi|426215486|ref|XP_004002003.1| PREDICTED: ELAV-like protein 4 isoform 3 [Ovis aries]
Length = 366
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 226
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 227 QSPN----RRYPGPLHHQAQRF 244
>gi|432104153|gb|ELK30980.1| ELAV-like protein 4 [Myotis davidii]
Length = 268
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 71 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 128
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 129 QSPN----RRYPGPLHHQAQRF 146
>gi|84662764|ref|NP_001033787.1| ELAV-like protein 4 isoform b [Mus musculus]
gi|291398924|ref|XP_002715150.1| PREDICTED: ELAV-like 4-like isoform 1 [Oryctolagus cuniculus]
gi|426215488|ref|XP_004002004.1| PREDICTED: ELAV-like protein 4 isoform 4 [Ovis aries]
gi|26347767|dbj|BAC37532.1| unnamed protein product [Mus musculus]
gi|112180554|gb|AAH52451.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Mus musculus]
Length = 380
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 226
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 227 QSPN----RRYPGPLHHQAQRF 244
>gi|348554579|ref|XP_003463103.1| PREDICTED: ELAV-like protein 4 isoform 2 [Cavia porcellus]
Length = 347
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 162 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 219
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 220 QSPN----RRYPGPLHHQAQRF 237
>gi|344241813|gb|EGV97916.1| ELAV-like protein 4 [Cricetulus griseus]
gi|431896875|gb|ELK06139.1| ELAV-like protein 4, partial [Pteropus alecto]
Length = 350
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 166 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 223
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 224 QSPN----RRYPGPLHHQAQRF 241
>gi|2801552|gb|AAC40080.1| RNA binding protein Elavl4 [Mus musculus]
Length = 346
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 162 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 219
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 220 QSPN----RRYPGPLHHQAQRF 237
>gi|254281259|ref|NP_001156869.1| ELAV-like protein 4 isoform c [Mus musculus]
Length = 356
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 172 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 229
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 230 QSPN----RRYPGPLHHQAQRF 247
>gi|221316765|ref|NP_068771.2| ELAV-like protein 4 isoform 1 [Homo sapiens]
gi|114556466|ref|XP_001134946.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 2 [Pan troglodytes]
gi|332219811|ref|XP_003259051.1| PREDICTED: ELAV-like protein 4 isoform 6 [Nomascus leucogenys]
gi|395855045|ref|XP_003799982.1| PREDICTED: ELAV-like protein 4 isoform 5 [Otolemur garnettii]
gi|397518912|ref|XP_003829619.1| PREDICTED: ELAV-like protein 4 isoform 6 [Pan paniscus]
gi|402854513|ref|XP_003891912.1| PREDICTED: ELAV-like protein 4 isoform 6 [Papio anubis]
gi|426329583|ref|XP_004025818.1| PREDICTED: ELAV-like protein 4 isoform 6 [Gorilla gorilla gorilla]
gi|223590202|sp|P26378.2|ELAV4_HUMAN RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|380810344|gb|AFE77047.1| ELAV-like protein 4 isoform 1 [Macaca mulatta]
Length = 380
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 226
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 227 QSPN----RRYPGPLHHQAQRF 244
>gi|149020435|gb|EDL78240.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Rattus norvegicus]
Length = 251
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS K L +L
Sbjct: 162 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQ--KTGQALLTHLY 219
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 220 --QSSARRYAGPLHH 232
>gi|119627248|gb|EAX06843.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_c [Homo sapiens]
Length = 356
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 172 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 229
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 230 QSPN----RRYPGPLHHQAQRF 247
>gi|149693657|ref|XP_001492578.1| PREDICTED: ELAV-like protein 4 isoform 4 [Equus caballus]
Length = 380
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 226
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 227 QSPN----RRYPGPLHHQAQRF 244
>gi|148693298|gb|EDL25245.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Mus musculus]
Length = 250
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS K L +L
Sbjct: 161 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQ--KTGQALLTHL- 217
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 218 -YQSSARRYAGPLHH 231
>gi|109123517|ref|XP_001107360.1| PREDICTED: ELAV-like protein 3-like [Macaca mulatta]
gi|296232958|ref|XP_002761808.1| PREDICTED: ELAV-like protein 3 [Callithrix jacchus]
Length = 251
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS K L +L
Sbjct: 162 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQ--KTGQALLTHLY 219
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 220 --QSSARRYAGPLHH 232
>gi|432099588|gb|ELK28729.1| ELAV-like protein 4 [Myotis davidii]
Length = 405
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 227 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGATEPITVKFANNP--SQKTGQALLTHL- 283
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 284 -YQSSARRYAGPLHH 297
>gi|117647212|ref|NP_001071119.1| ELAV-like protein 4 [Rattus norvegicus]
gi|2500581|sp|O09032.1|ELAV4_RAT RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|1911579|gb|AAB50733.1| HuD [Rattus sp.]
gi|165970854|gb|AAI58559.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Rattus norvegicus]
Length = 373
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 162 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 219
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 220 QSPN----RRYPGPLHHQAQRF 237
>gi|355755476|gb|EHH59223.1| Hu-antigen C, partial [Macaca fascicularis]
Length = 237
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 161 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHLY 218
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 219 --QSSARRYAGPLHH 231
>gi|281347138|gb|EFB22722.1| hypothetical protein PANDA_010481 [Ailuropoda melanoleuca]
Length = 377
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 166 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--Y 223
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 224 QSPN----RRYPGPLHHQAQRF 241
>gi|156717966|ref|NP_001096525.1| ELAV-like protein 4 [Xenopus (Silurana) tropicalis]
gi|288561889|sp|A4QNI8.1|ELAV4_XENTR RecName: Full=ELAV-like protein 4; AltName: Full=Protein ElrD
gi|138519953|gb|AAI35737.1| LOC100125165 protein [Xenopus (Silurana) tropicalis]
Length = 400
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 203 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQS 262
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P RR+ GP+HH A RF
Sbjct: 263 PN----RRYPGPLHHQAQRF 278
>gi|608543|gb|AAA96945.1| ribonucleoprotein [Xenopus laevis]
Length = 366
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 169 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQS 228
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P RR+ GP+HH A RF
Sbjct: 229 PN----RRYPGPLHHQAQRF 244
>gi|147901954|ref|NP_001080909.1| ELAV-like protein 4 [Xenopus laevis]
gi|82240321|sp|Q7SZT7.1|ELAV4_XENLA RecName: Full=ELAV-like protein 4; AltName: Full=Protein ElrD
gi|33585950|gb|AAH56021.1| ElrD protein [Xenopus laevis]
Length = 400
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 203 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQS 262
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P RR+ GP+HH A RF
Sbjct: 263 PN----RRYPGPLHHQAQRF 278
>gi|213623456|gb|AAI69769.1| ElrC protein [Xenopus laevis]
Length = 341
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/75 (53%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G++EPITVKFAN+PS Y T
Sbjct: 157 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQALLTHLYQT 216
Query: 65 PQAAAARRFGGPIHH 79
ARR+ GP+HH
Sbjct: 217 ----TARRYTGPLHH 227
>gi|338727192|ref|XP_001916382.2| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3-like [Equus
caballus]
Length = 345
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 165 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL- 221
Query: 65 PQAAAARRFGGPIHH 79
++ARR+GGP+H+
Sbjct: 222 -YQSSARRYGGPVHN 235
>gi|395850849|ref|XP_003797986.1| PREDICTED: ELAV-like protein 3 isoform 2 [Otolemur garnettii]
gi|402904299|ref|XP_003914984.1| PREDICTED: ELAV-like protein 3 isoform 2 [Papio anubis]
Length = 359
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 161 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL- 217
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 218 -YQSSARRYAGPLHH 231
>gi|27696830|gb|AAH43735.1| ElrD protein [Xenopus laevis]
Length = 395
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 198 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQS 257
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P RR+ GP+HH A RF
Sbjct: 258 PN----RRYPGPLHHQAQRF 273
>gi|311248628|ref|XP_003123218.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3-like [Sus
scrofa]
Length = 359
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 161 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL- 217
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 218 -YQSSARRYAGPLHH 231
>gi|354475185|ref|XP_003499810.1| PREDICTED: ELAV-like protein 3 [Cricetulus griseus]
Length = 359
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 161 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL- 217
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 218 -YQSSARRYAGPLHH 231
>gi|347446713|ref|NP_571528.2| ELAV-like protein 4 isoform 3 [Danio rerio]
Length = 403
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 1 MKGFTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLA 60
+ G T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS
Sbjct: 202 VTGPTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQ 261
Query: 61 AYLTPQAAAARRFGGPIHH-AGRF 83
Y +P RR+ GP+HH A RF
Sbjct: 262 LYQSPN----RRYPGPLHHQAQRF 281
>gi|347446711|ref|NP_001231530.1| ELAV-like protein 4 isoform 2 [Danio rerio]
Length = 398
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 1 MKGFTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLA 60
+ G T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS
Sbjct: 197 VTGPTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQ 256
Query: 61 AYLTPQAAAARRFGGPIHH-AGRF 83
Y +P RR+ GP+HH A RF
Sbjct: 257 LYQSPN----RRYPGPLHHQAQRF 276
>gi|49355765|ref|NP_115657.2| ELAV-like protein 3 isoform 2 [Homo sapiens]
gi|119604627|gb|EAW84221.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Homo sapiens]
gi|261861050|dbj|BAI47047.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3
[synthetic construct]
gi|380783931|gb|AFE63841.1| ELAV-like protein 3 isoform 2 [Macaca mulatta]
Length = 360
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 162 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL- 218
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 219 -YQSSARRYAGPLHH 232
>gi|431093|gb|AAA58677.1| huc [Homo sapiens]
Length = 359
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 162 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL- 218
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 219 -YQSSARRYAGPLHH 232
>gi|397520903|ref|XP_003830547.1| PREDICTED: ELAV-like protein 3 isoform 2 [Pan paniscus]
Length = 311
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 113 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL- 169
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 170 -YQSSARRYAGPLHH 183
>gi|347446708|ref|NP_001231529.1| ELAV-like protein 4 isoform 1 [Danio rerio]
Length = 411
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 1 MKGFTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLA 60
+ G T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS
Sbjct: 210 VTGPTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQ 269
Query: 61 AYLTPQAAAARRFGGPIHH-AGRF 83
Y +P RR+ GP+HH A RF
Sbjct: 270 LYQSPN----RRYPGPLHHQAQRF 289
>gi|301771944|ref|XP_002921434.1| PREDICTED: ELAV-like protein 3-like [Ailuropoda melanoleuca]
Length = 350
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 165 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL- 221
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 222 -YQSSARRYAGPLHH 235
>gi|344240064|gb|EGV96167.1| ELAV-like protein 3 [Cricetulus griseus]
Length = 352
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS K L +L
Sbjct: 154 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQ--KTGQALLTHL- 210
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 211 -YQSSARRYAGPLHH 224
>gi|395850847|ref|XP_003797985.1| PREDICTED: ELAV-like protein 3 isoform 1 [Otolemur garnettii]
gi|397520901|ref|XP_003830546.1| PREDICTED: ELAV-like protein 3 isoform 1 [Pan paniscus]
gi|402904297|ref|XP_003914983.1| PREDICTED: ELAV-like protein 3 isoform 1 [Papio anubis]
gi|403302356|ref|XP_003941826.1| PREDICTED: ELAV-like protein 3 isoform 2 [Saimiri boliviensis
boliviensis]
gi|410950488|ref|XP_003981937.1| PREDICTED: ELAV-like protein 3 isoform 2 [Felis catus]
gi|14280337|gb|AAK57545.1| Hu antigen C long [Homo sapiens]
Length = 318
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 113 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL- 169
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 170 -YQSSARRYAGPLHH 183
>gi|49355761|ref|NP_001411.2| ELAV-like protein 3 isoform 1 [Homo sapiens]
gi|21264436|sp|Q14576.3|ELAV3_HUMAN RecName: Full=ELAV-like protein 3; AltName: Full=Hu-antigen C;
Short=HuC; AltName: Full=Paraneoplastic cerebellar
degeneration-associated antigen; AltName:
Full=Paraneoplastic limbic encephalitis antigen 21
gi|119604626|gb|EAW84220.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Homo sapiens]
gi|380783929|gb|AFE63840.1| ELAV-like protein 3 isoform 1 [Macaca mulatta]
Length = 367
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 162 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL- 218
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 219 -YQSSARRYAGPLHH 232
>gi|403302354|ref|XP_003941825.1| PREDICTED: ELAV-like protein 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 352
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS K L +L
Sbjct: 154 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQ--KTGQALLTHL- 210
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 211 -YQSSARRYAGPLHH 224
>gi|344283287|ref|XP_003413403.1| PREDICTED: ELAV-like protein 3 [Loxodonta africana]
Length = 360
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 162 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL- 218
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 219 -YQSSARRYAGPLHH 232
>gi|410950486|ref|XP_003981936.1| PREDICTED: ELAV-like protein 3 isoform 1 [Felis catus]
gi|431918945|gb|ELK17812.1| ELAV-like protein 3 [Pteropus alecto]
Length = 352
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS K L +L
Sbjct: 154 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQ--KTGQALLTHL- 210
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 211 -YQSSARRYAGPLHH 224
>gi|444525484|gb|ELV14031.1| ELAV-like protein 3 [Tupaia chinensis]
Length = 332
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 154 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL- 210
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 211 -YQSSARRYAGPLHH 224
>gi|27229298|ref|NP_758827.1| ELAV-like protein 3 [Rattus norvegicus]
gi|34328053|ref|NP_034617.1| ELAV-like protein 3 [Mus musculus]
gi|3913870|sp|Q60900.1|ELAV3_MOUSE RecName: Full=ELAV-like protein 3; AltName: Full=Hu-antigen C;
Short=HuC
gi|1146120|gb|AAC52999.1| mHuC-L [Mus musculus]
gi|26006109|dbj|BAC41352.1| HuC [Rattus norvegicus]
gi|30354162|gb|AAH52097.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C) [Mus musculus]
gi|148693297|gb|EDL25244.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Mus musculus]
gi|149020436|gb|EDL78241.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Rattus norvegicus]
Length = 367
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 162 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL- 218
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 219 -YQSSARRYAGPLHH 232
>gi|14585790|gb|AAK67714.1| HUC [Homo sapiens]
Length = 360
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS K L +L
Sbjct: 162 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQ--KTGQALLTHL- 218
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 219 -YQSSARRYAGPLHH 232
>gi|1144009|gb|AAC53000.1| mHuC-S, partial [Mus musculus]
Length = 275
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 77 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL- 133
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 134 -YQSSARRYAGPLHH 147
>gi|281337375|gb|EFB12959.1| hypothetical protein PANDA_010283 [Ailuropoda melanoleuca]
Length = 369
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 159 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL- 215
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 216 -YQSSARRYAGPLHH 229
>gi|326925350|ref|XP_003208879.1| PREDICTED: ELAV-like protein 4-like [Meleagris gallopavo]
Length = 379
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 182 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKTSQALLSQLYQS 241
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P RR+ GP+HH A RF
Sbjct: 242 PN----RRYPGPLHHQAQRF 257
>gi|426387251|ref|XP_004060087.1| PREDICTED: ELAV-like protein 3 isoform 1 [Gorilla gorilla gorilla]
gi|355703162|gb|EHH29653.1| Hu-antigen C [Macaca mulatta]
Length = 339
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 154 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL- 210
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 211 -YQSSARRYAGPLHH 224
>gi|426387255|ref|XP_004060089.1| PREDICTED: ELAV-like protein 3 isoform 3 [Gorilla gorilla gorilla]
Length = 346
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 154 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL- 210
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 211 -YQSSARRYAGPLHH 224
>gi|170044495|ref|XP_001849881.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167867621|gb|EDS31004.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 393
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 53/77 (68%), Gaps = 6/77 (7%)
Query: 6 DFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSP--SSSNKVIAP-LAAY 62
D + +GFIRFDQR EAERAI LNGT PKG +PITVKF+N+P +S+ K++ P L +
Sbjct: 201 DKPKGVGFIRFDQRKEAERAIAALNGTTPKGLTDPITVKFSNTPGQNSTAKIVQPALPTF 260
Query: 63 LTPQAAAARRFGGPIHH 79
L PQ RR G IHH
Sbjct: 261 LNPQ--LTRRLGA-IHH 274
>gi|426387253|ref|XP_004060088.1| PREDICTED: ELAV-like protein 3 isoform 2 [Gorilla gorilla gorilla]
Length = 366
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 154 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL- 210
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 211 -YQSSARRYAGPLHH 224
>gi|408358348|gb|AFU54936.1| ELAV-like protein 4, partial [Trachemys scripta elegans]
Length = 202
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 84 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKTSQALLSQLYQS 143
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P RR+ GP+HH A RF
Sbjct: 144 PN----RRYPGPLHHQAQRF 159
>gi|134026264|gb|AAI36135.1| ELAV (embryonic lethal, abnormal vision)-like 3 (Hu antigen C)
[Xenopus (Silurana) tropicalis]
Length = 342
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/75 (53%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G++EPITVKFAN+PS Y T
Sbjct: 158 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQALLTHLYQT 217
Query: 65 PQAAAARRFGGPIHH 79
ARR+ GP+HH
Sbjct: 218 ----TARRYTGPLHH 228
>gi|148224170|ref|NP_001084080.1| ELAV-like protein 3 [Xenopus laevis]
gi|82245647|sp|Q91584.1|ELAV3_XENLA RecName: Full=ELAV-like protein 3; AltName: Full=Protein ElrC
gi|608541|gb|AAA96944.1| ribonucleoprotein [Xenopus laevis]
Length = 348
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/75 (53%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G++EPITVKFAN+PS Y T
Sbjct: 157 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQALLTHLYQT 216
Query: 65 PQAAAARRFGGPIHH 79
ARR+ GP+HH
Sbjct: 217 ----TARRYTGPLHH 227
>gi|334321532|ref|XP_003340124.1| PREDICTED: ELAV-like protein 4 isoform 2 [Monodelphis domestica]
Length = 347
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKTSQALLSQLYQS 221
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P RR+ GP+HH A RF
Sbjct: 222 PN----RRYPGPLHHQAQRF 237
>gi|345787182|ref|XP_542056.3| PREDICTED: ELAV-like protein 3 [Canis lupus familiaris]
Length = 647
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYL 63
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+P S K L +L
Sbjct: 448 VTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNP--SQKTGQALLTHL 505
Query: 64 TPQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 506 Y--QSSARRYAGPLHH 519
>gi|395530250|ref|XP_003767210.1| PREDICTED: ELAV-like protein 4 [Sarcophilus harrisii]
Length = 707
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYL 63
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y
Sbjct: 509 VTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKTSQALLSQLYQ 568
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
+P RR+ GP+HH A RF
Sbjct: 569 SPN----RRYPGPLHHQAQRF 585
>gi|198425950|ref|XP_002126161.1| PREDICTED: similar to ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 (Hu antigen D) [Ciona intestinalis]
Length = 564
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN-KVIAPLAAYL 63
T R +GF+RFD+R EAE AI LNGTIP G+ +P+TVKFAN+PS N +V+ L A
Sbjct: 211 TGMSRGVGFVRFDKRPEAENAISALNGTIPAGAKDPVTVKFANNPSQKNQQVLQSLYAAA 270
Query: 64 TPQAAAARRFGGPIHHAGR 82
+P A GP++H R
Sbjct: 271 SPTRRLATPAAGPLYHQAR 289
>gi|426229023|ref|XP_004008593.1| PREDICTED: ELAV-like protein 3 isoform 1 [Ovis aries]
Length = 359
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y
Sbjct: 161 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLY-- 218
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 219 --QSSARRYAGPLHH 231
>gi|327264130|ref|XP_003216869.1| PREDICTED: ELAV-like protein 3-like [Anolis carolinensis]
Length = 386
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R +GFIRFD+RIEAE AI+ LNG P G++EPITVKFAN+PS Y T
Sbjct: 193 RGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQALLTHLYQT---- 248
Query: 69 AARRFGGPIHH 79
ARR+ GP+HH
Sbjct: 249 TARRYTGPLHH 259
>gi|71896483|ref|NP_001025497.1| ELAV-like protein 3 [Xenopus (Silurana) tropicalis]
gi|123913100|sp|Q28FX0.1|ELAV3_XENTR RecName: Full=ELAV-like protein 3; AltName: Full=Protein ElrC
gi|89266725|emb|CAJ83874.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C) [Xenopus (Silurana) tropicalis]
Length = 343
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R +GFIRFD+RIEAE AI+ LNG P G++EPITVKFAN+PS Y T
Sbjct: 163 RGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQALLTHLYQT---- 218
Query: 69 AARRFGGPIHH 79
ARR+ GP+HH
Sbjct: 219 TARRYTGPLHH 229
>gi|440910150|gb|ELR59976.1| ELAV-like protein 3, partial [Bos grunniens mutus]
Length = 373
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y
Sbjct: 161 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLY-- 218
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 219 --QSSARRYAGPLHH 231
>gi|426229025|ref|XP_004008594.1| PREDICTED: ELAV-like protein 3 isoform 2 [Ovis aries]
Length = 318
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y
Sbjct: 113 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLY-- 170
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 171 --QSSARRYAGPLHH 183
>gi|157118056|ref|XP_001658986.1| hypothetical protein AaeL_AAEL008164 [Aedes aegypti]
gi|108875838|gb|EAT40063.1| AAEL008164-PA [Aedes aegypti]
Length = 363
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 6/77 (7%)
Query: 6 DFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSP--SSSNKVIAP-LAAY 62
D + +GFIRFDQR EAERAI LNGT PKG +PITVKF+N+P +++ K++ P L +
Sbjct: 165 DKPKGVGFIRFDQRKEAERAIAALNGTTPKGLTDPITVKFSNTPGQNTAAKIVQPALPTF 224
Query: 63 LTPQAAAARRFGGPIHH 79
L PQ RR G IHH
Sbjct: 225 LNPQ--LTRRLGA-IHH 238
>gi|359067089|ref|XP_002688919.2| PREDICTED: ELAV-like protein 3 [Bos taurus]
Length = 408
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y
Sbjct: 210 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLY-- 267
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 268 --QSSARRYAGPLHH 280
>gi|296485880|tpg|DAA27995.1| TPA: ELAV-like protein 3-like [Bos taurus]
Length = 407
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y
Sbjct: 209 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLY-- 266
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 267 --QSSARRYAGPLHH 279
>gi|71051886|gb|AAH99348.1| ElrD protein, partial [Xenopus laevis]
Length = 360
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 163 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQS 222
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P RR+ GP+HH A RF
Sbjct: 223 PN----RRYPGPLHHQAQRF 238
>gi|410921400|ref|XP_003974171.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 4-like [Takifugu
rubripes]
Length = 414
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/76 (52%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R +GFIRFD+R+EAE AI+ LNG P G+ EPITVKFAN+PS Y +P
Sbjct: 221 RGVGFIRFDKRVEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQSPN-- 278
Query: 69 AARRFGGPIHH-AGRF 83
RR+ GP+HH A RF
Sbjct: 279 --RRYPGPLHHQAQRF 292
>gi|395513446|ref|XP_003760935.1| PREDICTED: ELAV-like protein 1 [Sarcophilus harrisii]
Length = 374
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 191 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 250
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 251 P----ARRFGGPVHHQAQRF 266
>gi|432119731|gb|ELK38615.1| ELAV-like protein 1 [Myotis davidii]
Length = 296
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 113 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 172
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 173 P----ARRFGGPVHHQAQRF 188
>gi|440910206|gb|ELR60031.1| ELAV-like protein 1, partial [Bos grunniens mutus]
Length = 330
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 128 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 187
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 188 P----ARRFGGPVHHQAQRF 203
>gi|297632376|ref|NP_001172077.1| ELAV-like protein 1 [Oryctolagus cuniculus]
gi|296399062|gb|ADH10369.1| embryonic lethal abnormal vision-like 1 protein [Oryctolagus
cuniculus]
Length = 326
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 202
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 203 P----ARRFGGPVHHQAQRF 218
>gi|301773130|ref|XP_002921959.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Ailuropoda
melanoleuca]
Length = 339
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 202
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 203 P----ARRFGGPVHHQAQRF 218
>gi|67968717|dbj|BAE00717.1| unnamed protein product [Macaca fascicularis]
Length = 326
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 202
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 203 P----ARRFGGPVHHQAQRF 218
>gi|351701320|gb|EHB04239.1| ELAV-like protein 1, partial [Heterocephalus glaber]
Length = 329
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 146 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 205
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 206 P----ARRFGGPVHHQAQRF 221
>gi|332852452|ref|XP_001156587.2| PREDICTED: ELAV-like protein 1 isoform 1 [Pan troglodytes]
gi|397477357|ref|XP_003810039.1| PREDICTED: ELAV-like protein 1 [Pan paniscus]
gi|426386983|ref|XP_004059958.1| PREDICTED: ELAV-like protein 1 isoform 2 [Gorilla gorilla gorilla]
gi|194375035|dbj|BAG62630.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 170 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 229
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 230 P----ARRFGGPVHHQAQRF 245
>gi|119589356|gb|EAW68950.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_b [Homo sapiens]
Length = 445
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 262 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 321
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 322 P----ARRFGGPVHHQAQRF 337
>gi|348504313|ref|XP_003439706.1| PREDICTED: ELAV-like protein 4-like [Oreochromis niloticus]
Length = 476
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/76 (53%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +P
Sbjct: 283 RGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQSPN-- 340
Query: 69 AARRFGGPIHH-AGRF 83
RR+ GP+HH A RF
Sbjct: 341 --RRYPGPLHHQAQRF 354
>gi|73965401|ref|XP_537585.2| PREDICTED: ELAV-like protein 1-like [Canis lupus familiaris]
Length = 326
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 202
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 203 P----ARRFGGPVHHQAQRF 218
>gi|149716413|ref|XP_001497933.1| PREDICTED: ELAV-like protein 1 [Equus caballus]
Length = 326
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 202
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 203 P----ARRFGGPVHHQAQRF 218
>gi|73986922|ref|XP_854218.1| PREDICTED: ELAV-like protein 1 isoform 1 [Canis lupus familiaris]
gi|301773126|ref|XP_002921957.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Ailuropoda
melanoleuca]
gi|344299314|ref|XP_003421331.1| PREDICTED: ELAV-like protein 1 [Loxodonta africana]
gi|281349989|gb|EFB25573.1| hypothetical protein PANDA_010904 [Ailuropoda melanoleuca]
Length = 326
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 202
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 203 P----ARRFGGPVHHQAQRF 218
>gi|115497832|ref|NP_001069922.1| ELAV-like protein 1 [Bos taurus]
gi|261244966|ref|NP_001159666.1| ELAV-like protein 1 [Ovis aries]
gi|73587279|gb|AAI02496.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Bos taurus]
gi|256665397|gb|ACV04844.1| ELAV-like protein 1 [Ovis aries]
gi|296485836|tpg|DAA27951.1| TPA: ELAV-like 1 (Hu antigen R) [Bos taurus]
Length = 326
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 202
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 203 P----ARRFGGPVHHQAQRF 218
>gi|305855162|ref|NP_001182263.1| ELAV-like protein 1 [Sus scrofa]
gi|285818484|gb|ADC38915.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 [Sus
scrofa]
gi|456753432|gb|JAA74168.1| ELAV-like 1 (Hu antigen R) [Sus scrofa]
Length = 326
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 202
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 203 P----ARRFGGPVHHQAQRF 218
>gi|38201714|ref|NP_001410.2| ELAV-like protein 1 [Homo sapiens]
gi|114675067|ref|XP_001156643.1| PREDICTED: ELAV-like protein 1 isoform 2 [Pan troglodytes]
gi|395750352|ref|XP_002828622.2| PREDICTED: ELAV-like protein 1 [Pongo abelii]
gi|395841768|ref|XP_003793705.1| PREDICTED: ELAV-like protein 1 [Otolemur garnettii]
gi|402914021|ref|XP_003919435.1| PREDICTED: ELAV-like protein 1 [Papio anubis]
gi|403296075|ref|XP_003938946.1| PREDICTED: ELAV-like protein 1 [Saimiri boliviensis boliviensis]
gi|426386981|ref|XP_004059957.1| PREDICTED: ELAV-like protein 1 isoform 1 [Gorilla gorilla gorilla]
gi|20981691|sp|Q15717.2|ELAV1_HUMAN RecName: Full=ELAV-like protein 1; AltName: Full=Hu-antigen R;
Short=HuR
gi|13097228|gb|AAH03376.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Homo sapiens]
gi|32879929|gb|AAP88795.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Homo sapiens]
gi|60654991|gb|AAX32059.1| ELAV-like 1 [synthetic construct]
gi|60654993|gb|AAX32060.1| ELAV-like 1 [synthetic construct]
gi|60654995|gb|AAX32061.1| ELAV-like 1 [synthetic construct]
gi|60654997|gb|AAX32062.1| ELAV-like 1 [synthetic construct]
gi|119589355|gb|EAW68949.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Homo sapiens]
gi|157928080|gb|ABW03336.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [synthetic construct]
gi|157928791|gb|ABW03681.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [synthetic construct]
gi|208966198|dbj|BAG73113.1| ELAV-like 1protein [synthetic construct]
gi|355703066|gb|EHH29557.1| hypothetical protein EGK_10021 [Macaca mulatta]
gi|355755385|gb|EHH59132.1| hypothetical protein EGM_09177 [Macaca fascicularis]
gi|380784245|gb|AFE63998.1| ELAV-like protein 1 [Macaca mulatta]
gi|383416395|gb|AFH31411.1| ELAV-like protein 1 [Macaca mulatta]
gi|384945706|gb|AFI36458.1| ELAV-like protein 1 [Macaca mulatta]
gi|410212674|gb|JAA03556.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410265350|gb|JAA20641.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410305890|gb|JAA31545.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410342973|gb|JAA40433.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
Length = 326
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 202
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 203 P----ARRFGGPVHHQAQRF 218
>gi|432856226|ref|XP_004068415.1| PREDICTED: ELAV-like protein 4-like [Oryzias latipes]
Length = 439
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/76 (53%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +P
Sbjct: 245 RGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQSPN-- 302
Query: 69 AARRFGGPIHH-AGRF 83
RR+ GP+HH A RF
Sbjct: 303 --RRYPGPLHHQAQRF 316
>gi|608549|gb|AAA96940.1| ribonucleoprotein [Danio rerio]
gi|68085524|gb|AAH65965.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Danio rerio]
Length = 367
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 1 MKGFTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLA 60
+ G T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS
Sbjct: 166 VTGPTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQ 225
Query: 61 AYLTPQAAAARRFGGPIHH-AGRF 83
Y +P RR+ GP+HH A RF
Sbjct: 226 LYQSPN----RRYPGPLHHQAQRF 245
>gi|126323791|ref|XP_001366151.1| PREDICTED: ELAV-like protein 1 [Monodelphis domestica]
Length = 326
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 202
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 203 P----ARRFGGPVHHQAQRF 218
>gi|332264173|ref|XP_003281121.1| PREDICTED: ELAV-like protein 1 [Nomascus leucogenys]
Length = 326
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 202
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 203 P----ARRFGGPVHHQAQRF 218
>gi|259013331|ref|NP_001158376.1| Hu/elav protein [Saccoglossus kowalevskii]
gi|32307761|gb|AAP79277.1| Hu/elav [Saccoglossus kowalevskii]
Length = 357
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+R EAE AI+ NGTIP G+ + ITVKFAN+P S N A AYL
Sbjct: 175 TGHSRGVGFIRFDKRTEAEEAIKRYNGTIPPGAVDAITVKFANNP-SQNHAKALQQAYL- 232
Query: 65 PQAAAARRFGGPIHHAGR 82
A+ RR+ GP+HH R
Sbjct: 233 --ASPTRRYPGPLHHQTR 248
>gi|119265|sp|P23241.1|ELAV_DROVI RecName: Full=Protein elav; AltName: Full=Embryonic lethal abnormal
visual protein
gi|157338|gb|AAA28505.1| ELAV [Drosophila virilis]
Length = 519
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 328 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ--L 385
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 386 VRRIGGAMH 394
>gi|355685803|gb|AER97853.1| ELAV-like protein 1 [Mustela putorius furo]
Length = 343
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 161 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 220
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 221 P----ARRFGGPVHHQAQRF 236
>gi|195347400|ref|XP_002040241.1| GM19036 [Drosophila sechellia]
gi|195564435|ref|XP_002105824.1| GD16475 [Drosophila simulans]
gi|194121669|gb|EDW43712.1| GM19036 [Drosophila sechellia]
gi|194203185|gb|EDX16761.1| GD16475 [Drosophila simulans]
Length = 466
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 272 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 331
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 332 --LVRRIGGAMH 341
>gi|195439330|ref|XP_002067584.1| GK16120 [Drosophila willistoni]
gi|194163669|gb|EDW78570.1| GK16120 [Drosophila willistoni]
Length = 509
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 318 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ--L 375
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 376 VRRIGGAMH 384
>gi|194911931|ref|XP_001982402.1| GG12756 [Drosophila erecta]
gi|190648078|gb|EDV45371.1| GG12756 [Drosophila erecta]
Length = 466
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 272 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 331
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 332 --LVRRIGGAMH 341
>gi|358412972|ref|XP_887465.4| PREDICTED: ELAV-like protein 3 isoform 8 [Bos taurus]
Length = 511
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y
Sbjct: 313 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLY-- 370
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 371 --QSSARRYAGPLHH 383
>gi|18079265|ref|NP_525033.1| embryonic lethal abnormal vision, isoform A [Drosophila
melanogaster]
gi|386763527|ref|NP_001245447.1| embryonic lethal abnormal vision, isoform D [Drosophila
melanogaster]
gi|119264|sp|P16914.1|ELAV_DROME RecName: Full=Protein elav; AltName: Full=Embryonic lethal abnormal
visual protein
gi|157340|gb|AAA28506.1| elav protein [Drosophila melanogaster]
gi|4455922|emb|CAB37430.1| EG:65F1.2 [Drosophila melanogaster]
gi|15291955|gb|AAK93246.1| LD33076p [Drosophila melanogaster]
gi|22831422|gb|AAF45517.2| embryonic lethal abnormal vision, isoform A [Drosophila
melanogaster]
gi|220946076|gb|ACL85581.1| elav-PA [synthetic construct]
gi|220955740|gb|ACL90413.1| elav-PA [synthetic construct]
gi|383293116|gb|AFH07163.1| embryonic lethal abnormal vision, isoform D [Drosophila
melanogaster]
Length = 483
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 289 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 348
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 349 --LVRRIGGAMH 358
>gi|195042014|ref|XP_001991348.1| GH12602 [Drosophila grimshawi]
gi|193901106|gb|EDV99972.1| GH12602 [Drosophila grimshawi]
Length = 511
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 317 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 376
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 377 --LVRRIGGAMH 386
>gi|195402031|ref|XP_002059614.1| embryonic lethal, abnormal vision [Drosophila virilis]
gi|194147321|gb|EDW63036.1| embryonic lethal, abnormal vision [Drosophila virilis]
Length = 516
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 322 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 381
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 382 --LVRRIGGAMH 391
>gi|195130285|ref|XP_002009582.1| GI15436 [Drosophila mojavensis]
gi|193908032|gb|EDW06899.1| GI15436 [Drosophila mojavensis]
Length = 475
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 281 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 340
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 341 --LVRRIGGAMH 350
>gi|348550983|ref|XP_003461310.1| PREDICTED: ELAV-like protein 3-like [Cavia porcellus]
Length = 379
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/76 (53%), Positives = 50/76 (65%), Gaps = 6/76 (7%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS A LT
Sbjct: 181 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTG-----QALLT 235
Query: 65 P-QAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 236 QLYQSSARRYAGPLHH 251
>gi|62473376|ref|NP_001014713.1| embryonic lethal abnormal vision, isoform B [Drosophila
melanogaster]
gi|221329608|ref|NP_001138142.1| embryonic lethal abnormal vision, isoform C [Drosophila
melanogaster]
gi|2961399|emb|CAA18091.1| EG:65F1.2 [Drosophila melanogaster]
gi|61677860|gb|AAX52472.1| embryonic lethal abnormal vision, isoform B [Drosophila
melanogaster]
gi|220901638|gb|ACL82875.1| embryonic lethal abnormal vision, isoform C [Drosophila
melanogaster]
Length = 479
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 285 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 344
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 345 --LVRRIGGAMH 354
>gi|195469519|ref|XP_002099685.1| GE16581 [Drosophila yakuba]
gi|194187209|gb|EDX00793.1| GE16581 [Drosophila yakuba]
Length = 478
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 284 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 343
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 344 --LVRRIGGAMH 353
>gi|195165322|ref|XP_002023488.1| GL20165 [Drosophila persimilis]
gi|194105593|gb|EDW27636.1| GL20165 [Drosophila persimilis]
Length = 496
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 302 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 361
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 362 --LVRRIGGAMH 371
>gi|156536405|gb|ABU80357.1| embryonic lethal abnormal vision [Drosophila montana]
Length = 346
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 259 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 318
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 319 --LVRRIGGAMH 328
>gi|156536403|gb|ABU80356.1| embryonic lethal abnormal vision [Drosophila littoralis]
Length = 334
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 247 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 306
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 307 --LVRRIGGAMH 316
>gi|57231478|gb|AAW47452.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 334
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 247 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 306
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 307 --LVRRIGGAMH 316
>gi|57231504|gb|AAW47465.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 334
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 247 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 306
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 307 --LVRRIGGAMH 316
>gi|57231496|gb|AAW47461.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 333
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 246 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 305
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 306 --LVRRIGGAMH 315
>gi|57231470|gb|AAW47448.1| embryonic lethal abnormal vision protein [Drosophila virilis]
Length = 345
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 258 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 317
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 318 --LVRRIGGAMH 327
>gi|57231538|gb|AAW47482.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 340
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 253 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 312
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 313 --LVRRIGGAMH 322
>gi|57231546|gb|AAW47486.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 326
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 239 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 298
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 299 --LVRRIGGAMH 308
>gi|57231572|gb|AAW47499.1| embryonic lethal abnormal vision protein [Drosophila ezoana]
Length = 343
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 256 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 315
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 316 --LVRRIGGAMH 325
>gi|57231474|gb|AAW47450.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231476|gb|AAW47451.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231480|gb|AAW47453.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231484|gb|AAW47455.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231486|gb|AAW47456.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231488|gb|AAW47457.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231490|gb|AAW47458.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231492|gb|AAW47459.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231494|gb|AAW47460.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231498|gb|AAW47462.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231500|gb|AAW47463.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231502|gb|AAW47464.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231506|gb|AAW47466.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231508|gb|AAW47467.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231510|gb|AAW47468.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231514|gb|AAW47470.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231516|gb|AAW47471.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231518|gb|AAW47472.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231520|gb|AAW47473.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231522|gb|AAW47474.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231524|gb|AAW47475.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231526|gb|AAW47476.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231530|gb|AAW47478.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231532|gb|AAW47479.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231534|gb|AAW47480.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231540|gb|AAW47483.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231542|gb|AAW47484.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231544|gb|AAW47485.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231548|gb|AAW47487.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231550|gb|AAW47488.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231552|gb|AAW47489.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231554|gb|AAW47490.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231556|gb|AAW47491.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231560|gb|AAW47493.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231562|gb|AAW47494.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231564|gb|AAW47495.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231568|gb|AAW47497.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 337
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 250 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 309
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 310 --LVRRIGGAMH 319
>gi|57231472|gb|AAW47449.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231482|gb|AAW47454.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231512|gb|AAW47469.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231528|gb|AAW47477.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231536|gb|AAW47481.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231558|gb|AAW47492.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231566|gb|AAW47496.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231570|gb|AAW47498.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 338
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 251 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 310
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 311 --LVRRIGGAMH 320
>gi|194768871|ref|XP_001966534.1| GF22224 [Drosophila ananassae]
gi|190617298|gb|EDV32822.1| GF22224 [Drosophila ananassae]
Length = 490
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 296 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 355
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 356 --LVRRIGGAMH 365
>gi|198468704|ref|XP_001354795.2| GA18065 [Drosophila pseudoobscura pseudoobscura]
gi|198146532|gb|EAL31850.2| GA18065 [Drosophila pseudoobscura pseudoobscura]
Length = 496
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQ 66
+ +GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ
Sbjct: 302 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ 361
Query: 67 AAAARRFGGPIH 78
RR GG +H
Sbjct: 362 --LVRRIGGAMH 371
>gi|432868074|ref|XP_004071398.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Oryzias latipes]
Length = 359
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+R EAE AI+ LNG P G+ EPITVKFAN+PS Y T
Sbjct: 161 TGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQT 220
Query: 65 PQAAAARRFGGPIHH 79
AARR+ GP+HH
Sbjct: 221 ----AARRYTGPLHH 231
>gi|410902665|ref|XP_003964814.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Takifugu rubripes]
Length = 358
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+R EAE AI+ LNG P G+ EPITVKFAN+PS Y T
Sbjct: 161 TGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQT 220
Query: 65 PQAAAARRFGGPIHH 79
AARR+ GP+HH
Sbjct: 221 ----AARRYTGPLHH 231
>gi|18463972|gb|AAL73053.1| HUC [Sphoeroides nephelus]
Length = 356
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+R EAE AI+ LNG P G+ EPITVKFAN+PS Y T
Sbjct: 159 TGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQT 218
Query: 65 PQAAAARRFGGPIHH 79
AARR+ GP+HH
Sbjct: 219 ----AARRYTGPLHH 229
>gi|348509181|ref|XP_003442130.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Oreochromis
niloticus]
gi|410902663|ref|XP_003964813.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Takifugu rubripes]
gi|432868072|ref|XP_004071397.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Oryzias latipes]
Length = 345
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+R EAE AI+ LNG P G+ EPITVKFAN+PS Y T
Sbjct: 161 TGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQT 220
Query: 65 PQAAAARRFGGPIHH 79
AARR+ GP+HH
Sbjct: 221 ----AARRYTGPLHH 231
>gi|26347149|dbj|BAC37223.1| unnamed protein product [Mus musculus]
Length = 326
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAA-YL 63
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P + NK +A L+ Y
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANP-NQNKNMALLSQLYH 201
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
+P ARRFGGP+HH A RF
Sbjct: 202 SP----ARRFGGPVHHQAQRF 218
>gi|74179923|dbj|BAE36520.1| unnamed protein product [Mus musculus]
Length = 308
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAA-YL 63
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P + NK +A L+ Y
Sbjct: 125 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANP-NQNKNMALLSQLYH 183
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
+P ARRFGGP+HH A RF
Sbjct: 184 SP----ARRFGGPVHHQAQRF 200
>gi|410950299|ref|XP_003981845.1| PREDICTED: ELAV-like protein 1 [Felis catus]
Length = 336
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAA-YL 63
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P + NK +A L+ Y
Sbjct: 153 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANP-NQNKNMALLSQLYH 211
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
+P ARRFGGP+HH A RF
Sbjct: 212 SP----ARRFGGPVHHQAQRF 228
>gi|18858615|ref|NP_571524.1| ELAV-like protein 3 [Danio rerio]
gi|1683635|gb|AAB36515.1| zHuC [Danio rerio]
Length = 345
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+R EAE AI+ LNG P G+ EPITVKFAN+PS Y T
Sbjct: 161 TGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQT 220
Query: 65 PQAAAARRFGGPIHH 79
AARR+ GP+HH
Sbjct: 221 ----AARRYTGPLHH 231
>gi|74138233|dbj|BAE28602.1| unnamed protein product [Mus musculus]
Length = 326
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAA-YL 63
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P + NK +A L+ Y
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANP-NQNKNMALLSQLYH 201
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
+P ARRFGGP+HH A RF
Sbjct: 202 SP----ARRFGGPVHHQAQRF 218
>gi|26354232|dbj|BAC40744.1| unnamed protein product [Mus musculus]
Length = 305
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAA-YL 63
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P + NK +A L+ Y
Sbjct: 122 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANP-NQNKNMALLSQLYH 180
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
+P ARRFGGP+HH A RF
Sbjct: 181 SP----ARRFGGPVHHQAQRF 197
>gi|417409800|gb|JAA51391.1| Putative rna-binding protein elav/hu rrm superfamily, partial
[Desmodus rotundus]
Length = 336
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAA-YL 63
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P + NK +A L+ Y
Sbjct: 153 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANP-NQNKNMALLSQLYH 211
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
+P ARRFGGP+HH A RF
Sbjct: 212 SP----ARRFGGPVHHQAQRF 228
>gi|26344670|dbj|BAC35984.1| unnamed protein product [Mus musculus]
Length = 326
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAA-YL 63
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P + NK +A L+ Y
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANP-NQNKNMALLSQLYH 201
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
+P ARRFGGP+HH A RF
Sbjct: 202 SP----ARRFGGPVHHQAQRF 218
>gi|31542602|ref|NP_034615.2| ELAV-like protein 1 [Mus musculus]
gi|157818153|ref|NP_001102318.1| ELAV-like protein 1 [Rattus norvegicus]
gi|354488231|ref|XP_003506274.1| PREDICTED: ELAV-like protein 1 [Cricetulus griseus]
gi|341940489|sp|P70372.2|ELAV1_MOUSE RecName: Full=ELAV-like protein 1; AltName: Full=Elav-like generic
protein; AltName: Full=Hu-antigen R; Short=HuR; AltName:
Full=MelG
gi|26348505|dbj|BAC37892.1| unnamed protein product [Mus musculus]
gi|83308037|emb|CAI77902.1| HuR RNA binding protein [Spalax judaei]
gi|148690049|gb|EDL21996.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Mus musculus]
gi|148690050|gb|EDL21997.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Mus musculus]
gi|149015619|gb|EDL75000.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149015620|gb|EDL75001.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|197245826|gb|AAI68972.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Rattus norvegicus]
gi|208609536|dbj|BAG72208.1| HuR [Rattus norvegicus]
Length = 326
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAA-YL 63
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P + NK +A L+ Y
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANP-NQNKNMALLSQLYH 201
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
+P ARRFGGP+HH A RF
Sbjct: 202 SP----ARRFGGPVHHQAQRF 218
>gi|26330019|dbj|BAC28748.1| unnamed protein product [Mus musculus]
Length = 326
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAA-YL 63
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P + NK +A L+ Y
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANP-NQNKNMALLSQLYH 201
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
+P ARRFGGP+HH A RF
Sbjct: 202 SP----ARRFGGPVHHQAQRF 218
>gi|344247291|gb|EGW03395.1| ELAV-like protein 1 [Cricetulus griseus]
Length = 335
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAA-YL 63
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P + NK +A L+ Y
Sbjct: 135 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANP-NQNKNMALLSQLYH 193
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
+P ARRFGGP+HH A RF
Sbjct: 194 SP----ARRFGGPVHHQAQRF 210
>gi|47220048|emb|CAG12196.1| unnamed protein product [Tetraodon nigroviridis]
Length = 363
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+R EAE AI+ LNG P G+ EPITVKFAN+PS Y T
Sbjct: 159 TGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQT 218
Query: 65 PQAAAARRFGGPIHH 79
AARR+ GP+HH
Sbjct: 219 ----AARRYTGPLHH 229
>gi|47225636|emb|CAG07979.1| unnamed protein product [Tetraodon nigroviridis]
Length = 382
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R +GFIRFD+R+EAE AI+ LNG P G+ EPITVKFAN+PS Y +P
Sbjct: 172 RGVGFIRFDKRVEAEEAIKGLNGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQSPN-- 229
Query: 69 AARRFGGPIHH-AGRF 83
RR+ GP+HH A RF
Sbjct: 230 --RRYPGPLHHQAQRF 243
>gi|431900165|gb|ELK08079.1| ELAV-like protein 1 [Pteropus alecto]
Length = 401
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +P
Sbjct: 220 LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHSP- 278
Query: 67 AAAARRFGGPIHH-AGRF 83
ARRFGGP+HH A RF
Sbjct: 279 ---ARRFGGPVHHQAQRF 293
>gi|197247132|gb|AAI65930.1| Hug protein [Danio rerio]
Length = 219
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
R + FIRFD+R EAE AI++LNG+ P G++EPITVKFA +P+ S Y T
Sbjct: 40 LSRGVAFIRFDKRSEAEEAIKDLNGSKPSGASEPITVKFAANPNQSKNSQLLSQLYHTQ- 98
Query: 67 AAAARRFGGPIHH 79
+RRFGGP+HH
Sbjct: 99 ---SRRFGGPVHH 108
>gi|18858877|ref|NP_570984.1| ELAV-like protein 1 [Danio rerio]
gi|6694225|gb|AAF25188.1|AF184245_1 ribonucleoprotein [Danio rerio]
Length = 322
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
R + FIRFD+R EAE AI++LNG+ P G++EPITVKFA +P+ S Y T
Sbjct: 143 LSRGVAFIRFDKRSEAEEAIKDLNGSKPSGASEPITVKFAANPNQSKNSQLLSQLYHT-- 200
Query: 67 AAAARRFGGPIHH 79
+RRFGGP+HH
Sbjct: 201 --QSRRFGGPVHH 211
>gi|348509183|ref|XP_003442131.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Oreochromis
niloticus]
Length = 359
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R +GFIRFD+R EAE AI+ LNG P G+ EPITVKFAN+PS Y T
Sbjct: 166 RGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQT---- 221
Query: 69 AARRFGGPIHH 79
AARR+ GP+HH
Sbjct: 222 AARRYTGPLHH 232
>gi|40807107|gb|AAH65343.1| Elavl3 protein [Danio rerio]
Length = 359
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R +GFIRFD+R EAE AI+ LNG P G+ EPITVKFAN+PS Y T
Sbjct: 166 RGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQT---- 221
Query: 69 AARRFGGPIHH 79
AARR+ GP+HH
Sbjct: 222 AARRYTGPLHH 232
>gi|124388985|gb|ABN10621.1| elav [Drosophila recens]
Length = 401
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K++ P L A+L PQ
Sbjct: 242 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--L 299
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 300 VRRIGGAMH 308
>gi|124388947|gb|ABN10602.1| elav [Drosophila recens]
gi|124388971|gb|ABN10614.1| elav [Drosophila recens]
gi|124389005|gb|ABN10631.1| elav [Drosophila recens]
gi|124389007|gb|ABN10632.1| elav [Drosophila recens]
gi|124389009|gb|ABN10633.1| elav [Drosophila recens]
gi|124389011|gb|ABN10634.1| elav [Drosophila recens]
gi|124389013|gb|ABN10635.1| elav [Drosophila recens]
gi|124389015|gb|ABN10636.1| elav [Drosophila recens]
gi|124389017|gb|ABN10637.1| elav [Drosophila recens]
gi|124389019|gb|ABN10638.1| elav [Drosophila recens]
gi|124389021|gb|ABN10639.1| elav [Drosophila recens]
gi|124389023|gb|ABN10640.1| elav [Drosophila recens]
gi|124389025|gb|ABN10641.1| elav [Drosophila recens]
gi|124389027|gb|ABN10642.1| elav [Drosophila recens]
gi|124389029|gb|ABN10643.1| elav [Drosophila recens]
gi|124389031|gb|ABN10644.1| elav [Drosophila recens]
Length = 401
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K++ P L A+L PQ
Sbjct: 242 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--L 299
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 300 VRRIGGAMH 308
>gi|124388951|gb|ABN10604.1| elav [Drosophila recens]
Length = 400
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K++ P L A+L PQ
Sbjct: 241 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--L 298
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 299 VRRIGGAMH 307
>gi|124388979|gb|ABN10618.1| elav [Drosophila recens]
gi|124388981|gb|ABN10619.1| elav [Drosophila recens]
gi|124389003|gb|ABN10630.1| elav [Drosophila recens]
Length = 401
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K++ P L A+L PQ
Sbjct: 242 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--L 299
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 300 VRRIGGAMH 308
>gi|124388963|gb|ABN10610.1| elav [Drosophila recens]
Length = 400
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K++ P L A+L PQ
Sbjct: 241 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--L 298
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 299 VRRIGGAMH 307
>gi|124388957|gb|ABN10607.1| elav [Drosophila recens]
gi|124388977|gb|ABN10617.1| elav [Drosophila recens]
gi|124388991|gb|ABN10624.1| elav [Drosophila recens]
Length = 403
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K++ P L A+L PQ
Sbjct: 244 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--L 301
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 302 VRRIGGAMH 310
>gi|124388959|gb|ABN10608.1| elav [Drosophila recens]
Length = 398
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K++ P L A+L PQ
Sbjct: 239 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--L 296
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 297 VRRIGGAMH 305
>gi|124389033|gb|ABN10645.1| elav [Drosophila subquinaria]
Length = 405
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K++ P L A+L PQ
Sbjct: 246 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--L 303
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 304 VRRIGGAMH 312
>gi|124388953|gb|ABN10605.1| elav [Drosophila recens]
Length = 401
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K++ P L A+L PQ
Sbjct: 242 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--L 299
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 300 VRRIGGAMH 308
>gi|124388961|gb|ABN10609.1| elav [Drosophila recens]
Length = 400
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K++ P L A+L PQ
Sbjct: 241 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--L 298
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 299 VRRIGGAMH 307
>gi|124388983|gb|ABN10620.1| elav [Drosophila recens]
gi|124388999|gb|ABN10628.1| elav [Drosophila recens]
Length = 404
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K++ P L A+L PQ
Sbjct: 245 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--L 302
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 303 VRRIGGAMH 311
>gi|124388967|gb|ABN10612.1| elav [Drosophila recens]
gi|124388993|gb|ABN10625.1| elav [Drosophila recens]
Length = 399
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K++ P L A+L PQ
Sbjct: 240 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--L 297
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 298 VRRIGGAMH 306
>gi|124388997|gb|ABN10627.1| elav [Drosophila recens]
Length = 403
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K++ P L A+L PQ
Sbjct: 244 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--L 301
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 302 VRRIGGAMH 310
>gi|124388955|gb|ABN10606.1| elav [Drosophila recens]
gi|124388965|gb|ABN10611.1| elav [Drosophila recens]
gi|124388973|gb|ABN10615.1| elav [Drosophila recens]
Length = 397
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K++ P L A+L PQ
Sbjct: 238 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--L 295
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 296 VRRIGGAMH 304
>gi|124388987|gb|ABN10622.1| elav [Drosophila recens]
Length = 402
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K++ P L A+L PQ
Sbjct: 243 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--L 300
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 301 VRRIGGAMH 309
>gi|124388969|gb|ABN10613.1| elav [Drosophila recens]
gi|124388975|gb|ABN10616.1| elav [Drosophila recens]
gi|124388989|gb|ABN10623.1| elav [Drosophila recens]
gi|124389001|gb|ABN10629.1| elav [Drosophila recens]
Length = 402
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K++ P L A+L PQ
Sbjct: 243 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--L 300
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 301 VRRIGGAMH 309
>gi|124388949|gb|ABN10603.1| elav [Drosophila recens]
Length = 389
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K++ P L A+L PQ
Sbjct: 230 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--L 287
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 288 VRRIGGAMH 296
>gi|124388995|gb|ABN10626.1| elav [Drosophila recens]
Length = 403
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAA 69
+GFIRFD+R EA RAI LNGT P +PI VKF+N+P S++K++ P L A+L PQ
Sbjct: 244 VGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIMQPQLPAFLNPQ--L 301
Query: 70 ARRFGGPIH 78
RR GG +H
Sbjct: 302 VRRIGGAMH 310
>gi|345312831|ref|XP_001516462.2| PREDICTED: ELAV-like protein 1-like, partial [Ornithorhynchus
anatinus]
Length = 182
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +P
Sbjct: 1 LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHSP- 59
Query: 67 AAAARRFGGPIHH-AGRF 83
ARRFGGP+HH A RF
Sbjct: 60 ---ARRFGGPVHHQAQRF 74
>gi|326934269|ref|XP_003213214.1| PREDICTED: ELAV-like protein 1-like [Meleagris gallopavo]
Length = 298
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P + NK +A L+
Sbjct: 115 TGLSRGVAFIRFDKRSEAEEAITNFNGHKPPGSSEPITVKFAANP-NQNKNVALLSQLC- 172
Query: 65 PQAAAARRFGGPIHH-AGRF 83
+ ARRFGGP+HH A RF
Sbjct: 173 --HSPARRFGGPVHHQAQRF 190
>gi|301763026|ref|XP_002916933.1| PREDICTED: ELAV-like protein 2-like [Ailuropoda melanoleuca]
Length = 427
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 230 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 289
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 290 PN----RRYPGPLAQQAQRF 305
>gi|224087249|ref|XP_002190976.1| PREDICTED: ELAV-like protein 1-like [Taeniopygia guttata]
gi|449266784|gb|EMC77794.1| ELAV-like protein 1 [Columba livia]
Length = 326
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P + NK +A L+
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITNFNGHKPPGSSEPITVKFAANP-NQNKNVALLSQLC- 200
Query: 65 PQAAAARRFGGPIHH-AGRF 83
+ ARRFGGP+HH A RF
Sbjct: 201 --HSPARRFGGPVHHQAQRF 218
>gi|1022961|gb|AAB41913.1| HuR RNA binding protein [Homo sapiens]
Length = 326
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPI VKFA +P+ + V Y +
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPIAVKFAANPNQNKNVALLSQLYHS 202
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 203 P----ARRFGGPVHHQAQRF 218
>gi|45382283|ref|NP_990164.1| ELAV-like protein 1 [Gallus gallus]
gi|5738249|gb|AAD50313.1|AF176673_1 RNA-binding protein HuA [Gallus gallus]
Length = 326
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P + NK +A L+
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITNFNGHKPPGSSEPITVKFAANP-NQNKNVALLSQLC- 200
Query: 65 PQAAAARRFGGPIHH-AGRF 83
+ ARRFGGP+HH A RF
Sbjct: 201 --HSPARRFGGPVHHQAQRF 218
>gi|339246059|ref|XP_003374663.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316972148|gb|EFV55839.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 427
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 54/97 (55%), Gaps = 20/97 (20%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK---------- 54
T + +GF+R+D++ EA+ AI +LN TIP G EPI VKFANSPSSSN
Sbjct: 142 TGISKGVGFVRYDKKGEADAAIAKLNSTIPPGGTEPIVVKFANSPSSSNHRAAIHVAQAA 201
Query: 55 -----VIAPLAAYLTPQAAAARRFGGPIHH---AGRF 83
PLA + A ARRF GPIHH A RF
Sbjct: 202 QAALAAQVPLAFW--NAGATARRFQGPIHHTAAANRF 236
>gi|148237069|ref|NP_001084078.1| ELAV-like protein 1-A [Xenopus laevis]
gi|123909821|sp|Q1JQ73.1|ELV1A_XENLA RecName: Full=ELAV-like protein 1-A; AltName: Full=36 kDa
embryonic-type cytoplasmic polyadenylation
element-binding protein; Short=36 kDa eCPE-binding
protein; Short=36 kDa eCPEB; Short=p36; AltName:
Full=Protein ElrA-A; Short=ElrA
gi|94574290|gb|AAI16460.1| ElrA protein [Xenopus laevis]
Length = 337
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P + NK +A L+
Sbjct: 154 TGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFAANP-NQNKNVALLSQIC- 211
Query: 65 PQAAAARRFGGPIHH-AGRF 83
+ ARRFGGP+HH A RF
Sbjct: 212 --HSPARRFGGPVHHQAQRF 229
>gi|608537|gb|AAA96942.1| ribonucleoprotein [Xenopus laevis]
Length = 326
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P + NK +A L+
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFAANP-NQNKNVALLSQIC- 200
Query: 65 PQAAAARRFGGPIHH-AGRF 83
+ ARRFGGP+HH A RF
Sbjct: 201 --HSPARRFGGPVHHQAQRF 218
>gi|345326434|ref|XP_001510704.2| PREDICTED: hypothetical protein LOC100079778 [Ornithorhynchus
anatinus]
Length = 620
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/75 (53%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G++EPITVKFAN+PS Y T
Sbjct: 357 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQALLTHLYQT 416
Query: 65 PQAAAARRFGGPIHH 79
ARR+ GP+HH
Sbjct: 417 ----TARRYTGPLHH 427
>gi|53749734|ref|NP_001005461.1| ELAV-like protein 1 [Xenopus (Silurana) tropicalis]
gi|82236379|sp|Q6GLB5.1|ELAV1_XENTR RecName: Full=ELAV-like protein 1; AltName: Full=Protein ElrA
gi|49250885|gb|AAH74585.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
[Xenopus (Silurana) tropicalis]
Length = 326
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P + NK +A L+
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFAANP-NQNKNMALLSQLC- 200
Query: 65 PQAAAARRFGGPIHH-AGRF 83
+ ARRFGGP+HH A RF
Sbjct: 201 --HSPARRFGGPVHHQAQRF 218
>gi|47210814|emb|CAF92867.1| unnamed protein product [Tetraodon nigroviridis]
Length = 447
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R + FIRFD+R EAE AI+ LNG P GS+EPITVKFA +P+ + Y
Sbjct: 265 RGVAFIRFDKRSEAEDAIKHLNGHTPPGSSEPITVKFATNPNQARSSQMMSQMY----HG 320
Query: 69 AARRFGGPIHH-AGRF 83
+RRFGGP+HH A RF
Sbjct: 321 QSRRFGGPVHHQAQRF 336
>gi|395819370|ref|XP_003783066.1| PREDICTED: ELAV-like protein 2 [Otolemur garnettii]
Length = 388
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 191 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 250
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 251 PN----RRYPGPLAQQAQRF 266
>gi|29569920|gb|AAO84924.1| elav protein [Drosophila miranda]
Length = 181
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 13 FIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP-LAAYLTPQAAAAR 71
FIRFD+R EA RAI LNGT P +PI VKF+N+P S++K+I P L A+L PQ R
Sbjct: 1 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQ--LVR 58
Query: 72 RFGGPIH 78
R GG +H
Sbjct: 59 RIGGAMH 65
>gi|449514035|ref|XP_002190678.2| PREDICTED: ELAV-like protein 2-like [Taeniopygia guttata]
Length = 380
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 44/69 (63%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EP+TVKFAN+PS P Y
Sbjct: 190 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPVTVKFANNPSQKTNQATPNRRYPA 249
Query: 65 PQAAAARRF 73
P A A+RF
Sbjct: 250 PLAQQAQRF 258
>gi|327263683|ref|XP_003216647.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Anolis carolinensis]
Length = 397
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 200 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 259
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 260 PN----RRYPGPLAQQAQRF 275
>gi|28277433|gb|AAH45277.1| Hug protein [Danio rerio]
Length = 208
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
R + FIRFD+R EAE AI +LNG+ P G++EPITVKFA +P+ S Y T
Sbjct: 29 LSRGVAFIRFDKRSEAEEAIIDLNGSKPSGASEPITVKFAANPNQSKNSQLLSQLYHT-- 86
Query: 67 AAAARRFGGPIHH 79
+RRFGGP+HH
Sbjct: 87 --QSRRFGGPVHH 97
>gi|348041233|ref|NP_775431.2| ELAV-like protein 2 [Rattus norvegicus]
gi|149044491|gb|EDL97750.1| rCG53485, isoform CRA_b [Rattus norvegicus]
Length = 388
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 191 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 250
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 251 PN----RRYPGPLAQQAQRF 266
>gi|327263685|ref|XP_003216648.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Anolis carolinensis]
Length = 390
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 192 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 251
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 252 PN----RRYPGPLAQQAQRF 267
>gi|345308310|ref|XP_003428682.1| PREDICTED: ELAV-like protein 2-like [Ornithorhynchus anatinus]
Length = 595
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 397 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 456
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 457 PN----RRYPGPLAQQAQRF 472
>gi|148232140|ref|NP_001088628.1| ELAV-like protein 1-B [Xenopus laevis]
gi|82232943|sp|Q5U259.1|ELV1B_XENLA RecName: Full=ELAV-like protein 1-B; AltName: Full=Protein ElrA-B;
Short=ElrA
gi|55250533|gb|AAH86269.1| LOC495680 protein [Xenopus laevis]
Length = 326
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ S K +A L+
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFAANPNQS-KNMALLSQIC- 200
Query: 65 PQAAAARRFGGPIHH-AGRF 83
+ ARRFGGP+HH A RF
Sbjct: 201 --HSPARRFGGPVHHQAQRF 218
>gi|410928273|ref|XP_003977525.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Takifugu rubripes]
Length = 368
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R + FIRFD+R EAE AI+ LNG P GS EPITVKFA +P+ + Y
Sbjct: 192 RGVAFIRFDKRSEAEDAIKHLNGHTPPGSAEPITVKFATNPNQARGSQVMSQMY----HG 247
Query: 69 AARRFGGPIHH-AGRF 83
+RRFGGP+HH A RF
Sbjct: 248 QSRRFGGPVHHQAQRF 263
>gi|209155462|gb|ACI33963.1| ELAV-like protein 1 [Salmo salar]
Length = 342
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
R + FIRFD+R EAE AI++LNG P GS EPITVKFA SP+ + Y
Sbjct: 161 LSRGVAFIRFDKRAEAEDAIKDLNGQKPPGSAEPITVKFAASPNQAKNTQLISQLYHNQ- 219
Query: 67 AAAARRFGGPIHH-AGRF 83
RRFGGP+HH A RF
Sbjct: 220 ---GRRFGGPVHHQAQRF 234
>gi|410928271|ref|XP_003977524.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Takifugu rubripes]
Length = 358
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R + FIRFD+R EAE AI+ LNG P GS EPITVKFA +P+ + Y
Sbjct: 182 RGVAFIRFDKRSEAEDAIKHLNGHTPPGSAEPITVKFATNPNQARGSQVMSQMY----HG 237
Query: 69 AARRFGGPIHH-AGRF 83
+RRFGGP+HH A RF
Sbjct: 238 QSRRFGGPVHHQAQRF 253
>gi|410928269|ref|XP_003977523.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Takifugu rubripes]
Length = 334
Score = 70.9 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R + FIRFD+R EAE AI+ LNG P GS EPITVKFA +P+ + Y
Sbjct: 158 RGVAFIRFDKRSEAEDAIKHLNGHTPPGSAEPITVKFATNPNQARGSQVMSQMY----HG 213
Query: 69 AARRFGGPIHH-AGRF 83
+RRFGGP+HH A RF
Sbjct: 214 QSRRFGGPVHHQAQRF 229
>gi|365812510|ref|NP_001002172.2| ELAV-like protein 2 [Danio rerio]
Length = 389
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+R+EAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 191 TGVSRGVGFIRFDRRVEAEEAIKGLNGQKPPGATEPITVKFANNPSQKSSQALLSHL--Y 248
Query: 63 LTPQAAAARRFGGPI-HHAGRF 83
+P RR+ GP+ A RF
Sbjct: 249 QSPN----RRYPGPLAQQAQRF 266
>gi|354491615|ref|XP_003507950.1| PREDICTED: ELAV-like protein 2 isoform 3 [Cricetulus griseus]
Length = 356
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 172 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 231
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 232 PN----RRYPGPLAQQAQRF 247
>gi|119578990|gb|EAW58586.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_e [Homo sapiens]
Length = 374
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 176 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 235
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 236 PN----RRYPGPLAQQAQRF 251
>gi|1655901|gb|AAB17967.1| elav G homolog [Mus musculus]
Length = 326
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 53/81 (65%), Gaps = 7/81 (8%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAA-YL 63
T R + FIRFD+R EAE AI G P GS+EPITVKFA +P + NK +A L+ Y
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFIGHKPPGSSEPITVKFAANP-NQNKNMALLSQLYH 201
Query: 64 TPQAAAARRFGGPIHH-AGRF 83
+P ARRFGGP+HH A RF
Sbjct: 202 SP----ARRFGGPVHHQAQRF 218
>gi|46592818|ref|NP_997568.1| ELAV-like protein 2 isoform 1 [Mus musculus]
gi|29294744|gb|AAH49125.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
gi|34849537|gb|AAH58393.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 373
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 176 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 235
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 236 PN----RRYPGPLAQQAQRF 251
>gi|390458027|ref|XP_003732041.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897271|ref|XP_003911692.1| PREDICTED: ELAV-like protein 2 isoform 6 [Papio anubis]
gi|426361471|ref|XP_004047934.1| PREDICTED: ELAV-like protein 2 isoform 6 [Gorilla gorilla gorilla]
Length = 390
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 192 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 251
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 252 PN----RRYPGPLAQQAQRF 267
>gi|119578987|gb|EAW58583.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_b [Homo sapiens]
Length = 373
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 176 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 235
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 236 PN----RRYPGPLAQQAQRF 251
>gi|301773128|ref|XP_002921958.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 325
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+ + V Y +
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHS 202
Query: 65 PQAAAARRFGGPIHHAGRF 83
P ARRFGGP GRF
Sbjct: 203 P----ARRFGGPPPSKGRF 217
>gi|207080284|ref|NP_001128867.1| DKFZP459N111 protein [Pongo abelii]
gi|390458025|ref|XP_003732040.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897269|ref|XP_003911691.1| PREDICTED: ELAV-like protein 2 isoform 5 [Papio anubis]
gi|403272644|ref|XP_003928162.1| PREDICTED: ELAV-like protein 2 isoform 4 [Saimiri boliviensis
boliviensis]
gi|426361469|ref|XP_004047933.1| PREDICTED: ELAV-like protein 2 isoform 5 [Gorilla gorilla gorilla]
gi|55731642|emb|CAH92527.1| hypothetical protein [Pongo abelii]
Length = 389
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 191 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 250
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 251 PN----RRYPGPLAQQAQRF 266
>gi|354491613|ref|XP_003507949.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cricetulus griseus]
Length = 360
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|354491611|ref|XP_003507948.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cricetulus griseus]
Length = 359
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|291383147|ref|XP_002708097.1| PREDICTED: ELAV-like 2-like isoform 2 [Oryctolagus cuniculus]
Length = 376
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 191 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 250
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 251 PN----RRYPGPLAQQAQRF 266
>gi|281349018|gb|EFB24602.1| hypothetical protein PANDA_005072 [Ailuropoda melanoleuca]
gi|351703220|gb|EHB06139.1| ELAV-like protein 2 [Heterocephalus glaber]
gi|355567720|gb|EHH24061.1| Hu-antigen B [Macaca mulatta]
gi|355753294|gb|EHH57340.1| Hu-antigen B [Macaca fascicularis]
gi|431914785|gb|ELK15810.1| ELAV-like protein 2 [Pteropus alecto]
Length = 387
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 190 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 249
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 250 PN----RRYPGPLAQQAQRF 265
>gi|397521307|ref|XP_003830738.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan paniscus]
Length = 359
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|440909067|gb|ELR59018.1| ELAV-like protein 2 [Bos grunniens mutus]
Length = 388
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 190 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 249
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 250 PN----RRYPGPLAQQAQRF 265
>gi|295424162|ref|NP_001171354.1| ELAV-like protein 2 isoform 4 [Mus musculus]
gi|74206254|dbj|BAE24886.1| unnamed protein product [Mus musculus]
gi|149044490|gb|EDL97749.1| rCG53485, isoform CRA_a [Rattus norvegicus]
Length = 359
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|119578988|gb|EAW58584.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_c [Homo sapiens]
Length = 360
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 176 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 235
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 236 PN----RRYPGPLAQQAQRF 251
>gi|6754264|ref|NP_034616.1| ELAV-like protein 2 isoform 2 [Mus musculus]
gi|13124206|sp|Q60899.1|ELAV2_MOUSE RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Mel-N1
gi|1144004|gb|AAC52644.1| nervous system-specific RNA binding protein Mel-N1 [Mus musculus]
gi|15020258|gb|AAK74154.1| ELAV-like neuronal protein-1 [Mus musculus]
gi|148699000|gb|EDL30947.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 360
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|81914424|sp|Q8CH84.1|ELAV2_RAT RecName: Full=ELAV-like protein 2; AltName: Full=Hu-antigen B;
Short=HuB
gi|27374986|dbj|BAC53775.1| RNA binding protein HuB [Rattus norvegicus]
Length = 359
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|344248615|gb|EGW04719.1| ELAV-like protein 2 [Cricetulus griseus]
Length = 347
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|62088168|dbj|BAD92531.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) variant [Homo sapiens]
Length = 367
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 170 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 229
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 230 PN----RRYPGPLAQQAQRF 245
>gi|46592826|ref|NP_997569.1| ELAV-like protein 2 isoform 3 [Mus musculus]
gi|49114392|gb|AAH46598.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 347
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|521144|gb|AAA69698.1| ELAV-like neuronal protein 1 [Homo sapiens]
Length = 359
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|115511032|ref|NP_004423.2| ELAV-like protein 2 isoform a [Homo sapiens]
gi|197097794|ref|NP_001127414.1| ELAV-like protein 2 [Pongo abelii]
gi|149736900|ref|XP_001498035.1| PREDICTED: ELAV-like protein 2 isoform 1 [Equus caballus]
gi|291383145|ref|XP_002708096.1| PREDICTED: ELAV-like 2-like isoform 1 [Oryctolagus cuniculus]
gi|296190038|ref|XP_002743026.1| PREDICTED: ELAV-like protein 2 isoform 2 [Callithrix jacchus]
gi|311245695|ref|XP_001924617.2| PREDICTED: ELAV-like protein 2 isoform 1 [Sus scrofa]
gi|332229737|ref|XP_003264044.1| PREDICTED: ELAV-like protein 2 isoform 2 [Nomascus leucogenys]
gi|332831660|ref|XP_520515.3| PREDICTED: ELAV-like protein 2 isoform 3 [Pan troglodytes]
gi|345777488|ref|XP_865062.2| PREDICTED: ELAV-like protein 2 isoform 3 [Canis lupus familiaris]
gi|402897261|ref|XP_003911687.1| PREDICTED: ELAV-like protein 2 isoform 1 [Papio anubis]
gi|403272638|ref|XP_003928159.1| PREDICTED: ELAV-like protein 2 isoform 1 [Saimiri boliviensis
boliviensis]
gi|426220513|ref|XP_004004459.1| PREDICTED: ELAV-like protein 2 isoform 1 [Ovis aries]
gi|426361461|ref|XP_004047929.1| PREDICTED: ELAV-like protein 2 isoform 1 [Gorilla gorilla gorilla]
gi|75070704|sp|Q5R9Z6.1|ELAV2_PONAB RecName: Full=ELAV-like protein 2
gi|93141258|sp|Q12926.2|ELAV2_HUMAN RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Hel-N1
gi|55729364|emb|CAH91414.1| hypothetical protein [Pongo abelii]
gi|119578989|gb|EAW58585.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_d [Homo sapiens]
gi|261860488|dbj|BAI46766.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like protein 2
[synthetic construct]
gi|380784355|gb|AFE64053.1| ELAV-like protein 2 isoform a [Macaca mulatta]
Length = 359
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|410978372|ref|XP_003995567.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Felis catus]
Length = 360
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|348587076|ref|XP_003479294.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cavia porcellus]
Length = 360
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|209152513|gb|ACI33116.1| ELAV-like protein 1 [Salmo salar]
Length = 374
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
R + FIRFD+R EAE AI++LNG P G++EPITVKFA SP+ + Y
Sbjct: 192 LSRGVAFIRFDKRAEAEDAIKDLNGQKPPGASEPITVKFAASPNQAKNSQLINQLYHNQ- 250
Query: 67 AAAARRFGGPIHH-AGRF 83
RRFGGP+HH A RF
Sbjct: 251 ---GRRFGGPVHHQAQRF 265
>gi|49119672|gb|AAH72716.1| Zgc:91918 [Danio rerio]
Length = 360
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS--SSNKVIAPLAAY 62
T R +GFIRFD+R+EAE AI+ LNG P G+ EPITVKFAN+PS SS +++ L Y
Sbjct: 162 TGVSRGVGFIRFDRRVEAEEAIKGLNGQKPPGATEPITVKFANNPSQKSSQALLSHL--Y 219
Query: 63 LTPQAAAARRFGGPI-HHAGRF 83
+P RR+ GP+ A RF
Sbjct: 220 QSPN----RRYPGPLAQQAQRF 237
>gi|15020254|gb|AAK74152.1| ELAV-like neuronal protein-3 [Mus musculus]
Length = 348
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|15020256|gb|AAK74153.1| ELAV-like neuronal protein-2 [Mus musculus]
Length = 347
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|432103090|gb|ELK30412.1| ELAV-like protein 2 [Myotis davidii]
Length = 416
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 219 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 278
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 279 PN----RRYPGPLAQQAQRF 294
>gi|359067954|ref|XP_002707879.2| PREDICTED: LOW QUALITY PROTEIN: eLAV (embryonic lethal, abnormal
vision, Drosophila)-like 2 (Hu antigen B)-like [Bos
taurus]
Length = 346
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|283945529|ref|NP_001164666.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|283945537|ref|NP_001164668.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|386781798|ref|NP_001247929.1| ELAV-like protein 2 [Macaca mulatta]
gi|73971067|ref|XP_865045.1| PREDICTED: ELAV-like protein 2 isoform 2 [Canis lupus familiaris]
gi|296190040|ref|XP_002743027.1| PREDICTED: ELAV-like protein 2 isoform 3 [Callithrix jacchus]
gi|296190042|ref|XP_002743028.1| PREDICTED: ELAV-like protein 2 isoform 4 [Callithrix jacchus]
gi|311245697|ref|XP_003121925.1| PREDICTED: ELAV-like protein 2 isoform 2 [Sus scrofa]
gi|332229735|ref|XP_003264043.1| PREDICTED: ELAV-like protein 2 isoform 1 [Nomascus leucogenys]
gi|332229739|ref|XP_003264045.1| PREDICTED: ELAV-like protein 2 isoform 3 [Nomascus leucogenys]
gi|332831658|ref|XP_003312071.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan troglodytes]
gi|332831662|ref|XP_003312072.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan troglodytes]
gi|338719470|ref|XP_003364010.1| PREDICTED: ELAV-like protein 2 isoform 2 [Equus caballus]
gi|344271095|ref|XP_003407377.1| PREDICTED: ELAV-like protein 2-like [Loxodonta africana]
gi|402897263|ref|XP_003911688.1| PREDICTED: ELAV-like protein 2 isoform 2 [Papio anubis]
gi|402897265|ref|XP_003911689.1| PREDICTED: ELAV-like protein 2 isoform 3 [Papio anubis]
gi|402897267|ref|XP_003911690.1| PREDICTED: ELAV-like protein 2 isoform 4 [Papio anubis]
gi|403272640|ref|XP_003928160.1| PREDICTED: ELAV-like protein 2 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403272642|ref|XP_003928161.1| PREDICTED: ELAV-like protein 2 isoform 3 [Saimiri boliviensis
boliviensis]
gi|410042502|ref|XP_003951453.1| PREDICTED: ELAV-like protein 2 [Pan troglodytes]
gi|410978370|ref|XP_003995566.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Felis catus]
gi|426220515|ref|XP_004004460.1| PREDICTED: ELAV-like protein 2 isoform 2 [Ovis aries]
gi|426220517|ref|XP_004004461.1| PREDICTED: ELAV-like protein 2 isoform 3 [Ovis aries]
gi|426361463|ref|XP_004047930.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gorilla gorilla gorilla]
gi|426361465|ref|XP_004047931.1| PREDICTED: ELAV-like protein 2 isoform 3 [Gorilla gorilla gorilla]
gi|426361467|ref|XP_004047932.1| PREDICTED: ELAV-like protein 2 isoform 4 [Gorilla gorilla gorilla]
gi|441622584|ref|XP_004088846.1| PREDICTED: ELAV-like protein 2 [Nomascus leucogenys]
gi|21265137|gb|AAH30692.1| ELAVL2 protein [Homo sapiens]
gi|119578985|gb|EAW58581.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|119578986|gb|EAW58582.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|123981428|gb|ABM82543.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|123996267|gb|ABM85735.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|157928304|gb|ABW03448.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|384945702|gb|AFI36456.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|384945704|gb|AFI36457.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|387541444|gb|AFJ71349.1| ELAV-like protein 2 isoform b [Macaca mulatta]
Length = 346
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|905387|gb|AAA70417.1| Hel-N2 [Homo sapiens]
Length = 346
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|397521309|ref|XP_003830739.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan paniscus]
gi|397521311|ref|XP_003830740.1| PREDICTED: ELAV-like protein 2 isoform 3 [Pan paniscus]
gi|397521313|ref|XP_003830741.1| PREDICTED: ELAV-like protein 2 isoform 4 [Pan paniscus]
Length = 346
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|348587078|ref|XP_003479295.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cavia porcellus]
Length = 347
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|358421488|ref|XP_003584982.1| PREDICTED: eLAV (embryonic lethal, abnormal vision,
Drosophila)-like 2 (Hu antigen B)-like, partial [Bos
taurus]
Length = 224
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 51 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 110
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 111 PN----RRYPGPLAQQAQRF 126
>gi|126334002|ref|XP_001364932.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Monodelphis
domestica]
Length = 347
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|126334000|ref|XP_001364864.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Monodelphis
domestica]
Length = 360
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 162 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|198285433|gb|ACH85255.1| embryonic lethal abnormal vision like 1 [Salmo salar]
Length = 273
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
R + FIRFD+R EAE AI++LNG P G++EPITVKFA SP+ + Y
Sbjct: 91 LSRGVAFIRFDKRAEAEDAIKDLNGQKPPGASEPITVKFAASPNQAKNSQLINQLYHNQ- 149
Query: 67 AAAARRFGGPIHH-AGRF 83
RRFGGP+HH A RF
Sbjct: 150 ---GRRFGGPVHHQAQRF 164
>gi|296484904|tpg|DAA27019.1| TPA: ELAV-like 2-like [Bos taurus]
Length = 620
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYL 63
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y
Sbjct: 435 VTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQ 494
Query: 64 TPQAAAARRFGGPI-HHAGRF 83
+P RR+ GP+ A RF
Sbjct: 495 SPN----RRYPGPLAQQAQRF 511
>gi|432936678|ref|XP_004082225.1| PREDICTED: ELAV-like protein 1-like [Oryzias latipes]
Length = 342
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSS--SNKVIAPLAAY 62
T R + FIRFD+R EAE A++ LNG P G EPITVKFA +P+ + ++I+ L
Sbjct: 159 TGMSRGVAFIRFDKRSEAEEAVKSLNGQKPPGVTEPITVKFAANPNQVKNTQIISQL--- 215
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+RRFGGP+HH A RF
Sbjct: 216 ---YHNQSRRFGGPLHHQAQRF 234
>gi|608535|gb|AAA96941.1| ribonucleoprotein, partial [Mus musculus]
Length = 174
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R + FIRFD+R EAE AI G P GS+EPITVKFA +P+ + + Y +
Sbjct: 25 TGLSRGVAFIRFDKRSEAEEAITSFIGHKPPGSSEPITVKFAANPNQNKNMALLSQLYHS 84
Query: 65 PQAAAARRFGGPIHH-AGRF 83
P ARRFGGP+HH A RF
Sbjct: 85 P----ARRFGGPVHHQAQRF 100
>gi|444729824|gb|ELW70227.1| ELAV-like protein 2 [Tupaia chinensis]
Length = 353
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS + Y +
Sbjct: 155 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQNPNQAILSQLYQS 214
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 215 PN----RRYPGPLAQQAQRF 230
>gi|348504910|ref|XP_003440004.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Oreochromis
niloticus]
Length = 369
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R + FIRFD+R EA+ A++ LNG P GS EPITVKFA +P+ + Y
Sbjct: 192 RGVAFIRFDKRAEADDAVKHLNGHTPPGSAEPITVKFAANPNQARNSQMMSQMY----HG 247
Query: 69 AARRFGGPIHH-AGRF 83
+RRFGGP+HH A RF
Sbjct: 248 QSRRFGGPVHHQAQRF 263
>gi|395514482|ref|XP_003761446.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Sarcophilus
harrisii]
Length = 389
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/80 (48%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P + EPITVKFAN+PS Y +
Sbjct: 191 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPSATEPITVKFANNPSQKTNQAILSQLYQS 250
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 251 PN----RRYPGPLAQQAQRF 266
>gi|348504908|ref|XP_003440003.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Oreochromis
niloticus]
Length = 361
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R + FIRFD+R EA+ A++ LNG P GS EPITVKFA +P+ + Y
Sbjct: 184 RGVAFIRFDKRAEADDAVKHLNGHTPPGSAEPITVKFAANPNQARNSQMMSQMY----HG 239
Query: 69 AARRFGGPIHH-AGRF 83
+RRFGGP+HH A RF
Sbjct: 240 QSRRFGGPVHHQAQRF 255
>gi|213625406|gb|AAI70539.1| Xel-1 protein [Xenopus laevis]
Length = 388
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 189 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKVNHTILSQLYQS 248
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 249 PN----RRYPGPLAQQAQRF 264
>gi|348510833|ref|XP_003442949.1| PREDICTED: ELAV-like protein 1-like [Oreochromis niloticus]
Length = 341
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R + FIRFD+R EAE A++ LNG P G++EPITVKFA +P+ Y
Sbjct: 162 RGVAFIRFDKRAEAEEAVKNLNGQKPPGASEPITVKFAANPNQVKNTQLLSQLYHN---- 217
Query: 69 AARRFGGPIHH-AGRF 83
+RRFGGP+HH A RF
Sbjct: 218 QSRRFGGPLHHQAQRF 233
>gi|148235423|ref|NP_001081035.1| ELAV-like protein 2 [Xenopus laevis]
gi|288561905|sp|Q91903.2|ELAV2_XENLA RecName: Full=ELAV-like protein 2; AltName: Full=Elav like-1;
Short=Xel-1; AltName: Full=Protein ElrB; AltName:
Full=p45
gi|608539|gb|AAA96943.1| ribonucleoprotein [Xenopus laevis]
Length = 389
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 190 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKVNHTILSQLYQS 249
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 250 PN----RRYPGPLAQQAQRF 265
>gi|349732184|ref|NP_001025498.3| ELAV-like protein 2 [Xenopus (Silurana) tropicalis]
gi|288561906|sp|Q28GD4.2|ELAV2_XENTR RecName: Full=ELAV-like protein 2; AltName: Full=Protein ElrB
Length = 375
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 190 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKVNHTILSQLYQS 249
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 250 PN----RRYPGPLAQQAQRF 265
>gi|89266927|emb|CAJ82281.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Xenopus (Silurana) tropicalis]
Length = 374
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 190 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKVNHTILSQLYQS 249
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 250 PN----RRYPGPLAQQAQRF 265
>gi|351694381|gb|EHA97299.1| ELAV-like protein 3, partial [Heterocephalus glaber]
Length = 344
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPI +FAN+P S K L +L
Sbjct: 159 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIPGEFANNP--SQKTGQALLTHL- 215
Query: 65 PQAAAARRFGGPIHH 79
++ARR+ GP+HH
Sbjct: 216 -YQSSARRYAGPLHH 229
>gi|148236291|ref|NP_001081613.1| ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B)
[Xenopus laevis]
gi|728726|emb|CAA59430.1| Xel-1 [Xenopus laevis]
Length = 389
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 190 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKVNHTILSQLYQS 249
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 250 PN----RRYPGPLAQQAQRF 265
>gi|62739311|gb|AAH94189.1| Elavl2-a protein [Xenopus laevis]
Length = 359
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 160 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKVNHTILSQLYQS 219
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 220 PN----RRYPGPLAQQAQRF 235
>gi|117557982|gb|AAI27339.1| ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B)
[Xenopus (Silurana) tropicalis]
Length = 346
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS Y +
Sbjct: 161 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKVNHTILSQLYQS 220
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 221 PN----RRYPGPLAQQAQRF 236
>gi|348525751|ref|XP_003450385.1| PREDICTED: ELAV-like protein 2-like [Oreochromis niloticus]
Length = 440
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+R+EAE AI+ LN P G+ EPITVKFAN+PS Y +
Sbjct: 242 TGVSRGVGFIRFDRRVEAEEAIKGLNCQKPPGATEPITVKFANNPSQKTSQALLSQLYQS 301
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 302 PN----RRYPGPLAQQAQRF 317
>gi|432853220|ref|XP_004067599.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Oryzias latipes]
Length = 335
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R + FIRFD+R EAE A++ LNG P G +EPITVKFA +P+ + Y
Sbjct: 158 RGVAFIRFDKRSEAEDAVKHLNGHTPPGGSEPITVKFAVNPNQARNSQMMSQMY----HG 213
Query: 69 AARRFGGPIHH 79
+RRFGGP+HH
Sbjct: 214 QSRRFGGPVHH 224
>gi|18858613|ref|NP_571527.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Danio rerio]
gi|6694223|gb|AAF25187.1|AF184244_1 ribonucleoprotein [Danio rerio]
Length = 324
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 7/77 (9%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSS-SNKVIAPLAAYLTPQA 67
R + FIRFD+R EAE AI++LNG P G+ E +TVKFA SP+ N + P +
Sbjct: 145 RGVAFIRFDKRAEAEDAIKDLNGQKPPGAAEQMTVKFAASPNQVKNTQVIPQVYH----- 199
Query: 68 AAARRFGGPIHH-AGRF 83
+RRFGGP+HH A RF
Sbjct: 200 QQSRRFGGPVHHQAQRF 216
>gi|342837655|tpg|DAA34917.1| TPA_inf: embryonic lethal abnormal vision 1-like protein [Schmidtea
mediterranea]
Length = 466
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/50 (62%), Positives = 39/50 (78%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK 54
T R + FIRFDQR EAE AI++LNG +P S+EPITVKFANSPS++ +
Sbjct: 226 TGLSRGVAFIRFDQRCEAEMAIKKLNGHMPDNSSEPITVKFANSPSTTTR 275
>gi|348504906|ref|XP_003440002.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Oreochromis
niloticus]
Length = 335
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
R + FIRFD+R EA+ A++ LNG P GS EPITVKFA +P+ + Y
Sbjct: 156 LSRGVAFIRFDKRAEADDAVKHLNGHTPPGSAEPITVKFAANPNQARNSQMMSQMY---- 211
Query: 67 AAAARRFGGPIHH-AGRF 83
+RRFGGP+HH A RF
Sbjct: 212 HGQSRRFGGPVHHQAQRF 229
>gi|28279908|gb|AAH44184.1| Elavl1 protein [Danio rerio]
Length = 324
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 7/77 (9%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSS-SNKVIAPLAAYLTPQA 67
R + FIRFD+R EAE AI++LNG P G+ E +TVKFA SP+ N + P +
Sbjct: 145 RGVAFIRFDKRAEAEDAIKDLNGQKPPGAAEQMTVKFAASPNQVKNTQVIPQVYH----- 199
Query: 68 AAARRFGGPIHH-AGRF 83
+RRFGGP+HH A RF
Sbjct: 200 QQSRRFGGPVHHQAQRF 216
>gi|432853222|ref|XP_004067600.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Oryzias latipes]
Length = 346
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R + FIRFD+R EAE A++ LNG P G +EPITVKFA +P+ + Y
Sbjct: 169 RGVAFIRFDKRSEAEDAVKHLNGHTPPGGSEPITVKFAVNPNQARNSQMMSQMY----HG 224
Query: 69 AARRFGGPIHH 79
+RRFGGP+HH
Sbjct: 225 QSRRFGGPVHH 235
>gi|432853218|ref|XP_004067598.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Oryzias latipes]
Length = 356
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R + FIRFD+R EAE A++ LNG P G +EPITVKFA +P+ + Y
Sbjct: 179 RGVAFIRFDKRSEAEDAVKHLNGHTPPGGSEPITVKFAVNPNQARNSQMMSQMY----HG 234
Query: 69 AARRFGGPIHH 79
+RRFGGP+HH
Sbjct: 235 QSRRFGGPVHH 245
>gi|225706444|gb|ACO09068.1| ELAV-like protein 1 [Osmerus mordax]
Length = 374
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
R + FIRFD+R EAE AI++LNG P G++E ITVKFA SP+ + Y
Sbjct: 165 LSRGVAFIRFDKRAEAEDAIKDLNGQKPPGASEAITVKFAASPNQAKNTQLISQLYHN-- 222
Query: 67 AAAARRFGGPIHH-AGRF 83
+RRFGGP+HH A RF
Sbjct: 223 --QSRRFGGPVHHQAQRF 238
>gi|410927510|ref|XP_003977185.1| PREDICTED: ELAV-like protein 1-like [Takifugu rubripes]
Length = 341
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSS--NKVIAPLAAY 62
T R + FIRFD+R EAE A+ LNG P G EPITVKFA +P+ + +VI+ L
Sbjct: 158 TGASRGVAFIRFDKRAEAEDAVNNLNGQKPSGVVEPITVKFAANPNQTKNTQVISQLF-- 215
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+RRFGGP+HH A RF
Sbjct: 216 ----HNQSRRFGGPLHHQAQRF 233
>gi|395514484|ref|XP_003761447.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Sarcophilus
harrisii]
Length = 347
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE AI+ LNG P + EPITVKFAN+PS Y +
Sbjct: 162 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPSATEPITVKFANNPSQKTNQAILSQLYQS 221
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 222 PN----RRYPGPLAQQAQRF 237
>gi|432919034|ref|XP_004079712.1| PREDICTED: ELAV-like protein 2-like [Oryzias latipes]
Length = 389
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+R+EAE AI+ LN P G+ EPITVKFAN+PS Y +
Sbjct: 191 TGVSRGVGFIRFDRRVEAEEAIKGLNCQKPPGATEPITVKFANNPSQKTSQALLSQLYQS 250
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 251 PN----RRYPGPLAQQAQRF 266
>gi|608545|gb|AAA96938.1| ribonucleoprotein, partial [Danio rerio]
Length = 245
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 7/79 (8%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSS-SNKVIAPLAAYLTP 65
R + FIRFD+R EAE AI++LNG P G+ E +TVKFA SP+ N + P +
Sbjct: 64 LSRGVAFIRFDKRAEAEDAIKDLNGQKPPGAAEQMTVKFAASPNQVKNTQVIPQVYH--- 120
Query: 66 QAAAARRFGGPIHH-AGRF 83
+RRFGGP+HH A RF
Sbjct: 121 --QQSRRFGGPVHHQAQRF 137
>gi|349942059|dbj|GAA29907.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 645
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 39/48 (81%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSS 52
T R + FIR+DQR EAE AI++LNG +P G++EPITVKFANSPSS+
Sbjct: 243 TGLSRGVAFIRYDQRTEAEAAIRKLNGYLPPGASEPITVKFANSPSSN 290
>gi|363744747|ref|XP_001233484.2| PREDICTED: ELAV-like protein 2 isoform 1 [Gallus gallus]
Length = 345
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSS-SNKVI------A 57
T R +GFIRFD+RIEAE AI+ LNG P + EPITVKFAN+PS +N+ I +
Sbjct: 161 TGMSRGVGFIRFDKRIEAEEAIKGLNGQKPPAATEPITVKFANNPSQKTNQAILSQLYHS 220
Query: 58 PLAAYLTPQAAAARRF 73
P Y P A A+RF
Sbjct: 221 PNRRYPAPLAQQAQRF 236
>gi|363744745|ref|XP_003643117.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gallus gallus]
Length = 366
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSS-SNKVI------A 57
T R +GFIRFD+RIEAE AI+ LNG P + EPITVKFAN+PS +N+ I +
Sbjct: 169 TGMSRGVGFIRFDKRIEAEEAIKGLNGQKPPAATEPITVKFANNPSQKTNQAILSQLYHS 228
Query: 58 PLAAYLTPQAAAARRF 73
P Y P A A+RF
Sbjct: 229 PNRRYPAPLAQQAQRF 244
>gi|268529184|ref|XP_002629718.1| C. briggsae CBR-EXC-7 protein [Caenorhabditis briggsae]
Length = 456
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 16/91 (17%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN----------- 53
T + +GF+RFD++ EA+ AI+ LNG+IP G +E ITVKFAN+P+S+N
Sbjct: 168 TGLSKGVGFVRFDKKDEADTAIKTLNGSIPTGCSEQITVKFANNPASNNPKGLLGELEGL 227
Query: 54 ----KVIAPLAAYL-TPQAAAARRFGGPIHH 79
+ PL+ L P AA GP+HH
Sbjct: 228 QQAATTLVPLSTILGAPTLRAAAGGIGPMHH 258
>gi|410907065|ref|XP_003967012.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 2-like, partial
[Takifugu rubripes]
Length = 321
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+R+EAE AI+ LN P G+ EPITVKFAN+PS Y +
Sbjct: 123 TGVSRGVGFIRFDRRVEAEEAIKGLNCQKPPGATEPITVKFANNPSQKTSQALLSQLYQS 182
Query: 65 PQAAAARRFGGPI-HHAGRF 83
P RR+ GP+ A RF
Sbjct: 183 PN----RRYPGPLAQQAQRF 198
>gi|449266192|gb|EMC77278.1| ELAV-like protein 2 [Columba livia]
Length = 388
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSS-SNKVI------A 57
T R +GFIRFD+RIEAE AI+ LNG P + EPITVKFAN+PS +N+ I +
Sbjct: 190 TGISRGVGFIRFDKRIEAEEAIKGLNGQKPPSAAEPITVKFANNPSQKTNQAILSQLYHS 249
Query: 58 PLAAYLTPQAAAARRF 73
P Y P A A+RF
Sbjct: 250 PSRRYPAPLAQQAQRF 265
>gi|49658982|emb|CAE01482.1| HUR [Tetraodon nigroviridis]
Length = 325
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 9/82 (10%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSS--NKVIAPLAAY 62
T R + FIRFD+R EAE AI LNG P + EPITVKFA +P+ + +VI+ L
Sbjct: 142 TGVSRGVAFIRFDKRAEAEDAINNLNGQKPSEAIEPITVKFAANPNQTKNTQVISQLF-- 199
Query: 63 LTPQAAAARRFGGPIHH-AGRF 83
+RRFGGP+HH A RF
Sbjct: 200 ----HNQSRRFGGPLHHQAQRF 217
>gi|47219575|emb|CAG02281.1| unnamed protein product [Tetraodon nigroviridis]
Length = 351
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R +GFIRFD+R+EAE AI+ LN P G+ EPITVKFAN+PS Y +P
Sbjct: 157 RGVGFIRFDRRVEAEEAIKGLNCQKPPGATEPITVKFANNPSQKTSQALLSQLYQSPN-- 214
Query: 69 AARRFGGPI-HHAGRF 83
RR+ GP+ A RF
Sbjct: 215 --RRYPGPLAQQAQRF 228
>gi|93115150|gb|ABE98247.1| ELAV-like [Oreochromis mossambicus]
Length = 283
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
R + FIRFD+R EA+ A++ LNG P GS EPITVKFA +P+ + Y
Sbjct: 104 LSRGVAFIRFDKRAEADDAVKHLNGHTPPGSAEPITVKFAANPNQARNSQMMSQMY---- 159
Query: 67 AAAARRFGGPIHH-AGRF 83
+RR GGP+HH A RF
Sbjct: 160 HGQSRRCGGPVHHQAQRF 177
>gi|308464232|ref|XP_003094384.1| CRE-EXC-7 protein [Caenorhabditis remanei]
gi|308247806|gb|EFO91758.1| CRE-EXC-7 protein [Caenorhabditis remanei]
Length = 457
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 16/91 (17%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN----------- 53
T + +GF+RFD++ EA+ AI+ LNG+IP G +E ITVKFAN+P+S+N
Sbjct: 167 TGLSKGVGFVRFDKKDEADNAIKTLNGSIPTGCSEQITVKFANNPASNNPKGILSELEAV 226
Query: 54 ----KVIAPLAAYL-TPQAAAARRFGGPIHH 79
+ PL+ L P AA GP+HH
Sbjct: 227 QQAATTLVPLSTILGAPTLRAAAGGIGPMHH 257
>gi|159162195|pdb|1D9A|A Chain A, Solution Structure Of The Second Rna-Binding Domain
(Rbd2) Of Hu Antigen C (Huc)
Length = 85
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 36/46 (78%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS 50
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS
Sbjct: 39 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPS 84
>gi|17532863|ref|NP_496057.1| Protein EXC-7 [Caenorhabditis elegans]
gi|3876753|emb|CAA85327.1| Protein EXC-7 [Caenorhabditis elegans]
Length = 456
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 16/92 (17%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN----------- 53
T + +GF+RFD++ EA+ AI+ LNG+IP G +E ITVKFAN+P+S+N
Sbjct: 165 TGLSKGVGFVRFDKKDEADVAIKTLNGSIPSGCSEQITVKFANNPASNNPKGLLSDLEAV 224
Query: 54 ----KVIAPLAAYLTPQAAAARRFG-GPIHHA 80
+ PL+ L A G GP+HHA
Sbjct: 225 QQAATTLVPLSTILGAPTLRATAGGIGPMHHA 256
>gi|33356910|pdb|1FNX|H Chain H, Solution Structure Of The Huc Rbd1-Rbd2 Complexed With The
Au-Rich Element
Length = 174
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 36/46 (78%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS 50
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFAN+PS
Sbjct: 128 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPS 173
>gi|341901304|gb|EGT57239.1| CBN-EXC-7 protein [Caenorhabditis brenneri]
Length = 459
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 16/91 (17%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN----------- 53
T + +GF+RFD++ EA+ AI+ LNG+IP G +E ITVKFAN+P+S+N
Sbjct: 165 TGLSKGVGFVRFDKKDEADVAIKTLNGSIPTGCSEQITVKFANNPASNNPKGILSELEAV 224
Query: 54 ----KVIAPLAAYL-TPQAAAARRFGGPIHH 79
+ PL+ L P AA GP+HH
Sbjct: 225 QQAATTLVPLSTILGAPTLRAAAGGIGPMHH 255
>gi|390360288|ref|XP_003729672.1| PREDICTED: ELAV-like protein 2-like [Strongylocentrotus purpuratus]
Length = 385
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 19/84 (22%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK-----------VIA 57
R +GF+R+D+R EAE+AI+ LNG IP G +P+ VKFAN+P + +I+
Sbjct: 165 RGVGFVRYDRRCEAEKAIEGLNGNIPHGGKDPLIVKFANNPGQHYQKCLQQMYQQMPIIS 224
Query: 58 PLAAYLTPQAAAARRFGGPIHHAG 81
P L+P RR GGP+ G
Sbjct: 225 PT---LSP-----RRVGGPVSAGG 240
>gi|115666403|ref|XP_802063.2| PREDICTED: ELAV-like protein 2-like isoform 7 [Strongylocentrotus
purpuratus]
Length = 367
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 19/84 (22%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK-----------VIA 57
R +GF+R+D+R EAE+AI+ LNG IP G +P+ VKFAN+P + +I+
Sbjct: 168 RGVGFVRYDRRCEAEKAIEGLNGNIPHGGKDPLIVKFANNPGQHYQKCLQQMYQQMPIIS 227
Query: 58 PLAAYLTPQAAAARRFGGPIHHAG 81
P L+P RR GGP+ G
Sbjct: 228 PT---LSP-----RRVGGPVSAGG 243
>gi|156366101|ref|XP_001626979.1| predicted protein [Nematostella vectensis]
gi|156213874|gb|EDO34879.1| predicted protein [Nematostella vectensis]
Length = 335
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 12/79 (15%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSS-------SNKVIAPLAA 61
R GF+RFD+R EA+ AI +LN G+N +TVKFAN P+S S + +PL
Sbjct: 136 RGTGFVRFDKRCEAQTAIDDLNNKTLPGTNVKLTVKFANPPNSRQPAMPLSPALTSPLGR 195
Query: 62 YLTPQAAAARRF-GGPIHH 79
LTPQ R F GGP+HH
Sbjct: 196 ALTPQ----RNFSGGPVHH 210
>gi|358339903|dbj|GAA47875.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 471
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 33/43 (76%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN 47
T R +GFIRFDQRIEAE AI++LNG IP + EPITVK AN
Sbjct: 27 TGLSRGVGFIRFDQRIEAEEAIRKLNGVIPANATEPITVKLAN 69
>gi|45382281|ref|NP_990163.1| RNA-binding protein HuC [Gallus gallus]
gi|5738251|gb|AAD50314.1|AF176674_1 RNA-binding protein HuC [Gallus gallus]
Length = 365
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+R+EAE A++ L+G P G+ EPITVKFANSP +K L + L
Sbjct: 173 TGISRGVGFIRFDKRVEAEEAVRGLHGQKPLGATEPITVKFANSP--GHKAGGALLS-LC 229
Query: 65 PQAAAARRFGGPIHHAGRF 83
P ARR+ H RF
Sbjct: 230 P---GARRYSALQHAPQRF 245
>gi|301508553|gb|ADK78238.1| ELAV2 [Schmidtea mediterranea]
Length = 411
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSS 52
T R + FIRFDQR EA+ AI++LN P+ S EPI VKFANSPS+S
Sbjct: 176 TGLSRGVAFIRFDQRSEAQLAIKKLNSYQPENSTEPIIVKFANSPSTS 223
>gi|410053240|ref|XP_003316137.2| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3 [Pan
troglodytes]
Length = 447
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 42/68 (61%), Gaps = 6/68 (8%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYL 63
T R +GFIRFD+RIEAE AI+ LNG P G+ E ITVKFAN+ + AA L
Sbjct: 277 VTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAESITVKFANN------QVRRRAALL 330
Query: 64 TPQAAAAR 71
TP + AR
Sbjct: 331 TPLSLIAR 338
>gi|13096196|pdb|1FXL|A Chain A, Crystal Structure Of Hud And Au-Rich Element Of The C-Fos
Rna
gi|13096204|pdb|1G2E|A Chain A, Crystal Structure Of Hud And Au-Rich Element Of The Tumor
Necrosis Factor Alpha Rna
Length = 167
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 32/42 (76%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T R +GFIRFD+RIEAE AI+ LNG P G+ EPITVKFA
Sbjct: 126 TGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA 167
>gi|608547|gb|AAA96939.1| ribonucleoprotein, partial [Danio rerio]
Length = 183
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 21 EAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAAAARRFGGPIHH 79
EAE AI+ LNG P G+ EPITVKFAN+PS Y T AARR+ GP+HH
Sbjct: 2 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQT----AARRYTGPLHH 56
>gi|196010401|ref|XP_002115065.1| hypothetical protein TRIADDRAFT_28658 [Trichoplax adhaerens]
gi|190582448|gb|EDV22521.1| hypothetical protein TRIADDRAFT_28658 [Trichoplax adhaerens]
Length = 309
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R +GF+R+D+R EAE AI LN T+P G +TVKFAN+P+ ++ ++ +
Sbjct: 134 RGVGFVRYDKRNEAEAAILALNKTLPNGFQAQLTVKFANTPNQKSQ-----SSENSDYTD 188
Query: 69 AARRFGGPIHH 79
+ +GGP+ H
Sbjct: 189 IQQSYGGPMRH 199
>gi|343959022|dbj|BAK63366.1| ELAV-like protein 1 [Pan troglodytes]
Length = 305
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 32/46 (69%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS 50
T R + FIRFD+R EAE AI NG P GS+EPITVKFA +P+
Sbjct: 143 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPN 188
>gi|388326834|pdb|4ED5|A Chain A, Crystal Structure Of The Two N-Terminal Rrm Domains Of Hur
Complexed With Rna
gi|388326835|pdb|4ED5|B Chain B, Crystal Structure Of The Two N-Terminal Rrm Domains Of Hur
Complexed With Rna
Length = 177
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 29/42 (69%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T R + FIRFD+R EAE AI NG P GS+EPITVKFA
Sbjct: 126 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 167
>gi|349931692|dbj|GAA40288.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 941
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 35/53 (66%), Gaps = 6/53 (11%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNG-----TIPKG-SNEPITVKFANSPSS 51
T R + FIRFDQR EAE AI+ LNG P G +EPITVKFANSP+S
Sbjct: 485 TGLSRGVAFIRFDQRHEAELAIRRLNGYQAPPEHPNGVPSEPITVKFANSPNS 537
>gi|326432018|gb|EGD77588.1| hypothetical protein PTSG_08685 [Salpingoeca sp. ATCC 50818]
Length = 517
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 6 DFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANS 48
D + + F+RFD+R AERA+ ELN T+P ++PI VKFA++
Sbjct: 206 DVPKGIAFVRFDKRACAERAVAELNNTVPANCSQPIAVKFADT 248
>gi|360043584|emb|CCD81130.1| elav (embryonic lethal, abnormal vision,drosophila)-like protein
[Schistosoma mansoni]
Length = 682
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 11 LGFIRFDQRIEAERAIQELNG-TIPKGSNEPITVKFANSPSSS----NKVIAPLAAYLTP 65
+GFIRFDQR EAE AIQ+ NG + ++ P+ VKFAN P+S+ + P+ TP
Sbjct: 119 VGFIRFDQRHEAELAIQQFNGYRVGSIADSPLIVKFANIPTSNKNGITNTVNPMITSSTP 178
>gi|388604324|pdb|4EGL|A Chain A, Crystal Structure Of Two Tandem Rna Recognition Motifs Of
Human Antigen R
Length = 177
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 28/42 (66%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T R + FIRFD+R EAE AI NG P GS+EPITV FA
Sbjct: 126 TGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVXFA 167
>gi|332029988|gb|EGI69813.1| Sex-lethal-like protein [Acromyrmex echinatior]
Length = 365
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T R + F+RFD+R EA+ AI L+GTIP+G +EP++VK A
Sbjct: 217 LTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSVKIA 259
>gi|307176221|gb|EFN65860.1| Sex-lethal-like protein [Camponotus floridanus]
Length = 272
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T R + F+RFD+R EA+ AI +L+GTIP+G +EP++VK A
Sbjct: 112 LTGLPRGVAFVRFDKREEAQEAIAQLHGTIPEGGSEPLSVKIA 154
>gi|256089157|ref|XP_002580682.1| elav (embryonic lethal abnormal vision drosophila)-like protein
[Schistosoma mansoni]
Length = 365
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 11 LGFIRFDQRIEAERAIQELNG-TIPKGSNEPITVKFANSPSSS----NKVIAPLAAYLTP 65
+GFIRFDQR EAE AIQ+ NG + ++ P+ VKFAN P+S+ + P+ TP
Sbjct: 33 VGFIRFDQRHEAELAIQQFNGYRVGSIADSPLIVKFANIPTSNKNGITNTVNPMITSSTP 92
>gi|358253611|dbj|GAA53507.1| elav (embryonic lethal abnormal vision drosophila)-like protein
[Clonorchis sinensis]
Length = 495
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNE-PITVKFANSPSS 51
TD + +GFIRFDQR EAE AIQ NG GS + P+ VKFAN P++
Sbjct: 18 TDQSKGVGFIRFDQRHEAELAIQRFNGYRINGSGDAPLVVKFANLPTT 65
>gi|329009599|gb|AEB71419.1| ELAV-like protein 1 [Bubalus bubalis]
Length = 92
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLA 60
T R + FIR D+R EAE AI NG P GS+EPI KFA +P + NK +A L+
Sbjct: 35 TGLSRGVAFIRLDKRSEAEEAIASFNGHKPPGSSEPIIEKFAANP-NQNKNVALLS 89
>gi|328783793|ref|XP_003250344.1| PREDICTED: sex-lethal homolog [Apis mellifera]
Length = 346
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T R + F+RFD+R EA+ AI L+GTIP+G +EP++VK A
Sbjct: 207 LTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSVKIA 249
>gi|350411267|ref|XP_003489292.1| PREDICTED: protein sex-lethal-like [Bombus impatiens]
Length = 356
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T R + F+RFD+R EA+ AI L+GTIP+G +EP++VK A
Sbjct: 207 LTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSVKIA 249
>gi|340729596|ref|XP_003403084.1| PREDICTED: protein sex-lethal-like [Bombus terrestris]
Length = 356
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T R + F+RFD+R EA+ AI L+GTIP+G +EP++VK A
Sbjct: 207 LTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSVKIA 249
>gi|345479144|ref|XP_003423885.1| PREDICTED: sex-lethal homolog isoform 1 [Nasonia vitripennis]
Length = 277
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T R + F+R+D+R EA+ AI +L+GTIP+G +EP++VK A
Sbjct: 160 LTGLPRGVAFVRYDKREEAQDAINQLHGTIPEGGSEPLSVKIA 202
>gi|383859290|ref|XP_003705128.1| PREDICTED: sex-lethal homolog [Megachile rotundata]
Length = 386
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T R + F+RFD+R EA+ AI L+GTIP+G +EP++VK A
Sbjct: 235 ITGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSVKIA 277
>gi|307199187|gb|EFN79874.1| Protein sex-lethal [Harpegnathos saltator]
Length = 217
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T R + F+RFD+R EA+ AI L+GTIP+G +EP++VK A
Sbjct: 151 LTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSVKIA 193
>gi|345479148|ref|XP_003423887.1| PREDICTED: sex-lethal homolog isoform 3 [Nasonia vitripennis]
Length = 376
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T R + F+R+D+R EA+ AI +L+GTIP+G +EP++VK A
Sbjct: 204 LTGLPRGVAFVRYDKREEAQDAINQLHGTIPEGGSEPLSVKIA 246
>gi|345479146|ref|XP_003423886.1| PREDICTED: sex-lethal homolog isoform 2 [Nasonia vitripennis]
Length = 393
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T R + F+R+D+R EA+ AI +L+GTIP+G +EP++VK A
Sbjct: 221 LTGLPRGVAFVRYDKREEAQDAINQLHGTIPEGGSEPLSVKIA 263
>gi|221112748|ref|XP_002162771.1| PREDICTED: ELAV-like protein 3-like [Hydra magnipapillata]
Length = 376
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPK--GSNEPITVKFANSPS 50
R +GF+RFD+R +AE AI LN IP+ G+ +P+TVKFAN PS
Sbjct: 171 RGVGFVRFDKRNDAEAAINGLNNRIPEINGAIKPLTVKFANPPS 214
>gi|321464386|gb|EFX75394.1| sex-lethal protein variant 1 [Daphnia pulex]
Length = 263
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T R + F+RFD+R EA AI+ LNGTIP G PI+VK A
Sbjct: 151 TGMPRGVAFVRFDKREEALAAIEHLNGTIPHGRTNPISVKIA 192
>gi|167523433|ref|XP_001746053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775324|gb|EDQ88948.1| predicted protein [Monosiga brevicollis MX1]
Length = 635
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSS 51
+GF+RFDQ EAE AIQ N P+G P+ VKFA++ S
Sbjct: 316 VGFVRFDQHKEAENAIQRFNNVTPEGCTTPLVVKFADNAKS 356
>gi|440803264|gb|ELR24172.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 308
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANS 48
R +GF+RFD R +AE AI LNG P+G +PI VKFA++
Sbjct: 26 RGVGFVRFDTRGQAEAAIAALNGAQPEGMQQPIGVKFADT 65
>gi|325296731|ref|NP_001191601.1| ELAV 2-like protein [Aplysia californica]
gi|65307079|gb|AAY42042.1| ELAV 2-like protein [Aplysia californica]
Length = 325
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T + +GF+ +D R EAE AI+ L+G +P+G+ E I +KFA+ S K P+
Sbjct: 141 TGISKRVGFVLYDTRDEAENAIKCLSGKVPEGATEAIMIKFADDNSKKLKQQGPVQYVPI 200
Query: 65 PQAAA 69
P AA
Sbjct: 201 PNFAA 205
>gi|256075727|ref|XP_002574168.1| elav (embryonic lethal abnormal vision drosophila)-like protein
[Schistosoma mansoni]
Length = 517
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNG-TIP-----KGSNEPITVKFANSPSS 51
T R + FIRF+ R EAE AIQ+LNG +P N PITVKFAN P+S
Sbjct: 113 TGISRGVAFIRFNHRYEAELAIQQLNGYQLPFEYSNDILNRPITVKFANPPNS 165
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 28/43 (65%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T R + F+RFD+R EA AI+ LNGTIP G PI+VK A
Sbjct: 149 ITGMPRGVAFVRFDKREEALAAIEHLNGTIPHGRTNPISVKIA 191
>gi|353232427|emb|CCD79782.1| elav (embryonic lethal, abnormal vision,drosophila)-like protein
[Schistosoma mansoni]
Length = 535
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNG-TIPKGS-----NEPITVKFANSPSS 51
T R + FIRF+ R EAE AIQ+LNG +P N PITVKFAN P+S
Sbjct: 113 TGISRGVAFIRFNHRYEAELAIQQLNGYQLPFEYSNDILNRPITVKFANPPNS 165
>gi|449684824|ref|XP_002156791.2| PREDICTED: ELAV-like protein 2-like, partial [Hydra magnipapillata]
Length = 354
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSN--EPITVKFANSPS 50
R +GF+RFD+R +AE +I+ LN +P N +P+ VKFAN PS
Sbjct: 141 RGVGFVRFDKRCQAELSIEALNNKVPNLLNAIKPLAVKFANPPS 184
>gi|399152199|emb|CCI89170.1| elav protein, partial [Sepia officinalis]
Length = 171
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANS 48
+GF+ FDQ+ +AE AI +++GT+P G EP+ +KFA+
Sbjct: 130 VGFVLFDQKKQAEEAISQISGTVPAGGTEPLLIKFADD 167
>gi|351701133|gb|EHB04052.1| ELAV-like protein 1 [Heterocephalus glaber]
Length = 224
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
Query: 36 GSNEPITVKFANSPSSSNKVIAPLAAYLTPQAAAARRFGGPIHH-AGRF 83
GS+EPITVKFA +P+ + V Y +P ARRFGGP+HH A RF
Sbjct: 144 GSSEPITVKFAANPNKNKNVALLSQLYHSP----ARRFGGPVHHQALRF 188
>gi|42768808|gb|AAS45604.1| sex-lethal [Rhynchosciara americana]
Length = 293
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + FIR+++R EA+ AI LN IP+GSN+P+TV+ A
Sbjct: 206 RGVAFIRYNKREEAQEAIAALNNVIPEGSNQPLTVRVA 243
>gi|27752871|gb|AAO19468.1| sex-lethal [Sciara ocellaris]
Length = 287
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + FIR+++R EA+ AI LN IP+GSN+P+TV+ A
Sbjct: 200 RGVAFIRYNKREEAQEAIAALNNVIPEGSNQPLTVRVA 237
>gi|42768806|gb|AAS45603.1| sex-lethal [Bradysia coprophila]
Length = 289
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + FIR+++R EA+ AI LN IP+GSN+P+TV+ A
Sbjct: 202 RGVAFIRYNKREEAQEAIAALNNVIPEGSNQPLTVRVA 239
>gi|440800622|gb|ELR21658.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 229
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANS 48
GF+++D R EAE+AI+ LNG + GSNEP+ VK+A++
Sbjct: 142 GFVKYDNREEAEKAIRALNGKV-VGSNEPLVVKYADT 177
>gi|42768810|gb|AAS45605.1| sex-lethal [Trichomegalosphys pubescens]
Length = 292
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + FIR+++R EA+ AI LN IP+GSN+P+TV+ A
Sbjct: 205 RGVAFIRYNKREEAQEAIAALNNVIPEGSNQPLTVRVA 242
>gi|340383337|ref|XP_003390174.1| PREDICTED: ELAV-like protein 3-like [Amphimedon queenslandica]
Length = 392
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
R +GF+RFD+ +AE AI LNG G +P+ VKFAN P ++ + + L Q
Sbjct: 151 RGVGFVRFDKYTQAEVAIAALNGKQLVGGTQPLLVKFANPPKAATPLTGTVPGGLANQ 208
>gi|170055898|ref|XP_001863788.1| RNA-binding protein [Culex quinquefasciatus]
gi|167875756|gb|EDS39139.1| RNA-binding protein [Culex quinquefasciatus]
Length = 263
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANS 48
T R + F+RF++R EA+ AI LN IP+GSN+P+ V+ A+
Sbjct: 188 LTGHPRGVAFVRFNKREEAQEAISALNNVIPQGSNQPLNVRIADD 232
>gi|395546429|ref|XP_003775090.1| PREDICTED: uncharacterized protein LOC100934042 [Sarcophilus
harrisii]
Length = 819
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANS 48
R +GFIRF+ + EAE AI+ LNG P G EP+ V+FA++
Sbjct: 630 RGVGFIRFNMKSEAEEAIKALNGQKPCGILEPLVVRFAHN 669
>gi|195546808|ref|NP_001091837.2| Elav protein [Bombyx mori]
gi|195542256|gb|ABM21482.2| ELAV [Bombyx mori]
Length = 301
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN 47
+ F+ ++ + EAERAIQ +NG+ P G P+TVK+AN
Sbjct: 144 IAFVLYEHQYEAERAIQNINGSTPPGFLHPLTVKYAN 180
>gi|119732355|gb|ABL98209.1| ELAV-like protein [Bombyx mori]
Length = 268
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN 47
+ F+ ++ + EAERAIQ +NG+ P G P+TVK+AN
Sbjct: 111 IAFVLYEHQYEAERAIQNINGSTPPGFLHPLTVKYAN 147
>gi|357631741|gb|EHJ79210.1| sex-lethal [Danaus plexippus]
Length = 333
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+RFD+R EA+ AI LN IP+G +EP+ VK A
Sbjct: 188 RGVAFVRFDKREEAQEAIAALNNVIPEGGSEPLCVKVA 225
>gi|13357170|gb|AAK20026.1|AF234184_1 sex-lethal protein SXL2 [Lucilia cuprina]
Length = 325
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+RF++R EA+ AI LN IP+G+++P+TV+ A
Sbjct: 229 RGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLA 266
>gi|77379390|gb|ABA71352.1| sex-lethal isoform 2 [Bombyx mori]
Length = 313
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+D+R EA+ AI LN IP+G EP++VK A
Sbjct: 190 RGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSVKVA 227
>gi|2565362|gb|AAB81985.1| Sex-lethal protein [Musca domestica]
Length = 318
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+RF++R EA+ AI LN IP+G+++P+TV+ A
Sbjct: 222 RGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLA 259
>gi|6226777|sp|O17310.1|SXL_MUSDO RecName: Full=Sex-lethal homolog
gi|2565364|gb|AAB81986.1| Sex-lethal protein [Musca domestica]
Length = 324
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+RF++R EA+ AI LN IP+G+++P+TV+ A
Sbjct: 229 RGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLA 266
>gi|6226775|sp|O97018.2|SXL_CHRRU RecName: Full=Sex-lethal homolog
gi|25291016|gb|AAN74807.1| sex-lethal [Chrysomya rufifacies]
Length = 307
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+RF++R EA+ AI LN IP+G+++P+TV+ A
Sbjct: 212 RGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLA 249
>gi|2981305|gb|AAC38968.1| sex-lethal homolog CcSXL [Ceratitis capitata]
Length = 340
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+RF++R EA+ AI LN IP+G+++P+TV+ A
Sbjct: 229 RGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLA 266
>gi|112734730|ref|NP_001036780.1| sex-lethal isoform L [Bombyx mori]
gi|77379388|gb|ABA71351.1| sex-lethal isoform 1 [Bombyx mori]
Length = 336
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+D+R EA+ AI LN IP+G EP++VK A
Sbjct: 190 RGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSVKVA 227
>gi|89885655|dbj|BAE86938.1| sex-lethal [Bombyx mori]
Length = 336
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+D+R EA+ AI LN IP+G EP++VK A
Sbjct: 190 RGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSVKVA 227
>gi|6226164|sp|O61374.2|SXL_CERCA RecName: Full=Sex-lethal homolog; AltName: Full=CCSXL
Length = 348
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+RF++R EA+ AI LN IP+G+++P+TV+ A
Sbjct: 237 RGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLA 274
>gi|334350324|ref|XP_001371926.2| PREDICTED: ELAV-like protein 2-like [Monodelphis domestica]
Length = 522
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN 47
R +GFI FD++ EAE AI+ LNG P G+ P+ VKFA
Sbjct: 312 RGVGFILFDKKSEAEEAIKALNGQKPCGNRVPLIVKFAQ 350
>gi|13357168|gb|AAK20025.1|AF234183_1 sex-lethal protein SXL1 [Lucilia cuprina]
Length = 324
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+RF++R EA+ AI LN IP+G+++P+TV+ A
Sbjct: 229 RGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLA 266
>gi|290563184|ref|NP_001166854.1| sex-lethal isoform S [Bombyx mori]
gi|89885657|dbj|BAE86939.1| sex-lethal [Bombyx mori]
Length = 290
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+D+R EA+ AI LN IP+G EP++VK A
Sbjct: 144 RGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSVKVA 181
>gi|6456838|emb|CAA04179.2| Sex-lethal orthologous protein [Megaselia scalaris]
Length = 307
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSS 52
R + FIRF++R EA+ AI LN IP+G +P+TV+ A S
Sbjct: 191 RGVAFIRFNKREEAQEAISALNNVIPEGGTQPLTVRVAEEHGKS 234
>gi|195456590|ref|XP_002075201.1| GK16696 [Drosophila willistoni]
gi|194171286|gb|EDW86187.1| GK16696 [Drosophila willistoni]
Length = 508
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI+ LN TIP+G ++PI V+ A
Sbjct: 239 RGVAFVRYNKREEAQEAIKSLNNTIPEGGSQPIWVRLA 276
>gi|157128475|ref|XP_001661445.1| RNA-binding protein precursor, putative [Aedes aegypti]
gi|108872557|gb|EAT36782.1| AAEL011150-PA [Aedes aegypti]
Length = 285
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T F R + F+RF++R EA+ AI LN IP+G +P+ V+ A
Sbjct: 210 LTGFPRGVAFVRFNKREEAQEAISALNNVIPQGGTQPLIVRVA 252
>gi|30179878|sp|O01671.3|SXL_MEGSC RecName: Full=Sex-lethal homolog
gi|9743624|emb|CAC01696.1| sex-lethal homologue [Megaselia scalaris]
Length = 321
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSS 52
R + FIRF++R EA+ AI LN IP+G +P+TV+ A S
Sbjct: 205 RGVAFIRFNKREEAQEAISALNNVIPEGGTQPLTVRVAEEHGKS 248
>gi|52075416|emb|CAG29242.1| sex-lethal protein [Bactrocera oleae]
Length = 339
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+RF++R EA+ AI LN IP+G ++P+TV+ A
Sbjct: 232 RGVAFVRFNKREEAQEAISALNNVIPEGGSQPLTVRLA 269
>gi|328683477|gb|AEB33504.1| LD25793p [Drosophila melanogaster]
Length = 250
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T R + F+R+++R EA+ AI+ LN T+P+G ++PI V+ A
Sbjct: 22 LTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLA 64
>gi|194912401|ref|XP_001982498.1| GG12847 [Drosophila erecta]
gi|190648174|gb|EDV45467.1| GG12847 [Drosophila erecta]
Length = 513
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI+ LN T+P+G ++PI V+ A
Sbjct: 228 RGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLA 265
>gi|158285093|ref|XP_560351.3| AGAP003899-PA [Anopheles gambiae str. PEST]
gi|98986313|tpe|CAJ55784.1| TPA: sex-lethal [Anopheles gambiae]
gi|157020733|gb|EAL41988.3| AGAP003899-PA [Anopheles gambiae str. PEST]
Length = 302
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+RF++R EA+ AI LN IP+G N+P+ V+ A
Sbjct: 232 RGVAFVRFNKREEAQEAISALNNVIPQGGNQPLIVRVA 269
>gi|347970878|ref|XP_003436655.1| AGAP003899-PB [Anopheles gambiae str. PEST]
gi|333466414|gb|EGK96234.1| AGAP003899-PB [Anopheles gambiae str. PEST]
Length = 280
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+RF++R EA+ AI LN IP+G N+P+ V+ A
Sbjct: 210 RGVAFVRFNKREEAQEAISALNNVIPQGGNQPLIVRVA 247
>gi|195399021|ref|XP_002058119.1| GJ15667 [Drosophila virilis]
gi|194150543|gb|EDW66227.1| GJ15667 [Drosophila virilis]
Length = 428
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI+ LN T+P+G ++PI V+ A
Sbjct: 144 RGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLA 181
>gi|3255957|emb|CAA19655.1| EG:132E8.1 [Drosophila melanogaster]
Length = 485
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI+ LN T+P+G ++PI V+ A
Sbjct: 220 RGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLA 257
>gi|45553910|ref|NP_996326.1| sister-of-Sex-lethal [Drosophila melanogaster]
gi|25012235|gb|AAN71232.1| LD21345p [Drosophila melanogaster]
gi|27819751|gb|AAO24926.1| SD07604p [Drosophila melanogaster]
gi|45446770|gb|AAS65244.1| sister-of-Sex-lethal [Drosophila melanogaster]
gi|220951726|gb|ACL88406.1| CG3056-PB [synthetic construct]
Length = 443
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI+ LN T+P+G ++PI V+ A
Sbjct: 220 RGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLA 257
>gi|195347606|ref|XP_002040343.1| GM19131 [Drosophila sechellia]
gi|194121771|gb|EDW43814.1| GM19131 [Drosophila sechellia]
Length = 488
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI+ LN T+P+G ++PI V+ A
Sbjct: 220 RGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLA 257
>gi|194763555|ref|XP_001963898.1| GF21012 [Drosophila ananassae]
gi|190618823|gb|EDV34347.1| GF21012 [Drosophila ananassae]
Length = 757
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI+ LN T+P+G ++PI V+ A
Sbjct: 235 RGVAFVRYNKREEAQEAIKTLNNTVPEGGSQPIWVRLA 272
>gi|242025166|ref|XP_002432997.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518506|gb|EEB20259.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 211
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+D++ EA+ AI LNG +P G+ E I VK A
Sbjct: 145 RGVAFVRYDKKEEAQAAISNLNGVVPDGATEAIQVKIA 182
>gi|195469719|ref|XP_002099784.1| GE16683 [Drosophila yakuba]
gi|194187308|gb|EDX00892.1| GE16683 [Drosophila yakuba]
Length = 563
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 29/38 (76%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI+ LN T+P+G ++PI V+ A
Sbjct: 240 RGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLA 277
>gi|195041825|ref|XP_001991324.1| GH12116 [Drosophila grimshawi]
gi|193901082|gb|EDV99948.1| GH12116 [Drosophila grimshawi]
Length = 918
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN T+P+G++ PI V+ A
Sbjct: 310 RGVAFVRYNKREEAQEAIMALNNTVPEGASSPIWVRLA 347
>gi|442615389|ref|NP_001259304.1| Sex lethal, isoform Y [Drosophila melanogaster]
gi|440216504|gb|AGB95149.1| Sex lethal, isoform Y [Drosophila melanogaster]
Length = 708
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 252 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 289
>gi|78706522|ref|NP_001027062.1| Sex lethal, isoform O [Drosophila melanogaster]
gi|71854531|gb|AAZ52509.1| Sex lethal, isoform O [Drosophila melanogaster]
Length = 364
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 242 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 279
>gi|194896665|ref|XP_001978518.1| GG17637 [Drosophila erecta]
gi|195480535|ref|XP_002101294.1| GE17544 [Drosophila yakuba]
gi|190650167|gb|EDV47445.1| GG17637 [Drosophila erecta]
gi|194188818|gb|EDX02402.1| GE17544 [Drosophila yakuba]
Length = 335
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 212 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 249
>gi|442615387|ref|NP_001259303.1| Sex lethal, isoform X [Drosophila melanogaster]
gi|440216503|gb|AGB95148.1| Sex lethal, isoform X [Drosophila melanogaster]
Length = 722
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 244 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 281
>gi|103381|pir||B39725 sex-lethal sex determination protein MS11 - fruit fly (Drosophila
melanogaster)
gi|158523|gb|AAA28921.1| putative [Drosophila melanogaster]
Length = 366
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 244 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 281
>gi|195168643|ref|XP_002025140.1| GL26885 [Drosophila persimilis]
gi|198471287|ref|XP_002133706.1| GA22653 [Drosophila pseudoobscura pseudoobscura]
gi|194108585|gb|EDW30628.1| GL26885 [Drosophila persimilis]
gi|198145851|gb|EDY72333.1| GA22653 [Drosophila pseudoobscura pseudoobscura]
Length = 377
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 254 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 291
>gi|255075981|ref|XP_002501665.1| predicted protein [Micromonas sp. RCC299]
gi|226516929|gb|ACO62923.1| predicted protein [Micromonas sp. RCC299]
Length = 667
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSS 52
T+ R GF++F Q +AE AI+E+NG + +G + + VKFANS SS+
Sbjct: 68 TNSSRGFGFVKFMQVHQAEAAIKEMNGKVIRG--KVLEVKFANSDSSA 113
>gi|78710143|ref|NP_727164.2| Sex lethal, isoform H [Drosophila melanogaster]
gi|22831872|gb|AAF46240.2| Sex lethal, isoform H [Drosophila melanogaster]
Length = 366
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 244 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 281
>gi|281359983|ref|NP_001162688.1| Sex lethal, isoform R [Drosophila melanogaster]
gi|272506011|gb|ACZ95224.1| Sex lethal, isoform R [Drosophila melanogaster]
Length = 342
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 242 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 279
>gi|194763735|ref|XP_001963988.1| GF20968 [Drosophila ananassae]
gi|190618913|gb|EDV34437.1| GF20968 [Drosophila ananassae]
Length = 379
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 255 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 292
>gi|12643503|sp|Q24668.2|SXL_DROSU RecName: Full=Protein sex-lethal
Length = 354
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 254 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 291
>gi|442615379|ref|NP_727161.3| Sex lethal, isoform W [Drosophila melanogaster]
gi|324096522|gb|ADY17790.1| RE26226p [Drosophila melanogaster]
gi|440216502|gb|AAF46241.4| Sex lethal, isoform W [Drosophila melanogaster]
Length = 344
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 244 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 281
>gi|1403308|emb|CAA67016.1| sex-lethal [Drosophila subobscura]
Length = 346
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 246 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 283
>gi|195353431|ref|XP_002043208.1| Sxl [Drosophila sechellia]
gi|194127306|gb|EDW49349.1| Sxl [Drosophila sechellia]
Length = 301
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 244 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 281
>gi|195439114|ref|XP_002067476.1| GK16445 [Drosophila willistoni]
gi|194163561|gb|EDW78462.1| GK16445 [Drosophila willistoni]
Length = 373
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 248 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 285
>gi|195396313|ref|XP_002056776.1| Sex lethal [Drosophila virilis]
gi|194146543|gb|EDW62262.1| Sex lethal [Drosophila virilis]
Length = 368
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 245 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 282
>gi|195132500|ref|XP_002010681.1| GI21573 [Drosophila mojavensis]
gi|193907469|gb|EDW06336.1| GI21573 [Drosophila mojavensis]
Length = 367
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 244 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 281
>gi|195048229|ref|XP_001992493.1| GH24172 [Drosophila grimshawi]
gi|193893334|gb|EDV92200.1| GH24172 [Drosophila grimshawi]
Length = 365
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 244 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 281
>gi|78706524|ref|NP_001027063.1| Sex lethal, isoform N [Drosophila melanogaster]
gi|78707532|ref|NP_524791.3| Sex lethal, isoform C [Drosophila melanogaster]
gi|22831873|gb|AAN09197.1| Sex lethal, isoform C [Drosophila melanogaster]
gi|71854532|gb|AAZ52510.1| Sex lethal, isoform N [Drosophila melanogaster]
gi|317453674|gb|ADV19045.1| RE22452p [Drosophila melanogaster]
Length = 344
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 242 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 279
>gi|260166763|gb|ACX32993.1| RE12578p [Drosophila melanogaster]
Length = 360
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 258 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 295
>gi|194744937|ref|XP_001954949.1| GF18529 [Drosophila ananassae]
gi|190627986|gb|EDV43510.1| GF18529 [Drosophila ananassae]
Length = 417
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN 47
T + + F+RF R AE+A + L+G +P+G + PI VKF N
Sbjct: 265 TGLPKGVAFVRFCSRTSAEKAQKTLDGIVPRGGSRPIEVKFVN 307
>gi|281359979|ref|NP_001162686.1| Sex lethal, isoform P [Drosophila melanogaster]
gi|28317144|gb|AAO39587.1| LD15933p [Drosophila melanogaster]
gi|272506009|gb|ACZ95222.1| Sex lethal, isoform P [Drosophila melanogaster]
Length = 352
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 252 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 289
>gi|78710141|ref|NP_727163.2| Sex lethal, isoform E [Drosophila melanogaster]
gi|78710163|ref|NP_727165.2| Sex lethal, isoform A [Drosophila melanogaster]
gi|45446831|gb|AAO41638.2| Sex lethal, isoform A [Drosophila melanogaster]
gi|71854536|gb|AAZ52512.1| Sex lethal, isoform E [Drosophila melanogaster]
Length = 314
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 212 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 249
>gi|289803032|gb|ADD20766.1| RH41387p [Drosophila melanogaster]
Length = 322
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 220 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 257
>gi|281359985|ref|NP_001162689.1| Sex lethal, isoform AB [Drosophila melanogaster]
gi|272506012|gb|ACZ95225.1| Sex lethal, isoform AB [Drosophila melanogaster]
Length = 322
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 220 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 257
>gi|323301216|gb|ADX35950.1| SD08075p [Drosophila melanogaster]
Length = 322
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 220 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 257
>gi|78710119|ref|NP_727160.2| Sex lethal, isoform J [Drosophila melanogaster]
gi|78710165|ref|NP_727166.2| Sex lethal, isoform G [Drosophila melanogaster]
gi|22831874|gb|AAN09198.1| Sex lethal, isoform J [Drosophila melanogaster]
gi|71854533|gb|AAN09200.2| Sex lethal, isoform G [Drosophila melanogaster]
Length = 346
Score = 41.2 bits (95), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 244 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 281
>gi|78706528|ref|NP_001027065.1| Sex lethal, isoform L [Drosophila melanogaster]
gi|78710139|ref|NP_727162.2| Sex lethal, isoform D [Drosophila melanogaster]
gi|281359987|ref|NP_001162690.1| Sex lethal, isoform T [Drosophila melanogaster]
gi|135080|sp|P19339.1|SXL_DROME RecName: Full=Protein sex-lethal
gi|158426|gb|AAA28884.1| sex-linked protein [Drosophila melanogaster]
gi|158525|gb|AAA28922.1| Sx1 [Drosophila melanogaster]
gi|10728509|gb|AAG22410.1| Sex lethal, isoform D [Drosophila melanogaster]
gi|71854534|gb|AAZ52511.1| Sex lethal, isoform L [Drosophila melanogaster]
gi|272506013|gb|ACZ95226.1| Sex lethal, isoform T [Drosophila melanogaster]
Length = 354
Score = 41.2 bits (95), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 252 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 289
>gi|157833885|pdb|1SXL|A Chain A, Resonance Assignments And Solution Structure Of The
Second Rna-Binding Domain Of Sex-Lethal Determined By
Multidimensional Heteronuclear Magnetic Resonance
Spectroscopy
Length = 97
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 55 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 92
>gi|4929888|pdb|1B7F|A Chain A, Sxl-Lethal ProteinRNA COMPLEX
gi|4929889|pdb|1B7F|B Chain B, Sxl-Lethal ProteinRNA COMPLEX
Length = 168
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 131 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 168
>gi|4930239|pdb|3SXL|A Chain A, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
gi|4930240|pdb|3SXL|B Chain B, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
gi|4930241|pdb|3SXL|C Chain C, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
Length = 184
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI LN IP+G ++P++V+ A
Sbjct: 142 RGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 179
>gi|392587987|gb|EIW77320.1| hypothetical protein CONPUDRAFT_168270 [Coniophora puteana
RWD-64-598 SS2]
Length = 860
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEP---ITVKFANSP 49
+D R + F+R + R AE I+ L+G + +G N+P I+V+FA+SP
Sbjct: 326 LSDPPRIIAFVRLENRNAAEEIIERLHGRMVRGWNDPGCRISVRFADSP 374
>gi|357626334|gb|EHJ76460.1| hypothetical protein KGM_20562 [Danaus plexippus]
Length = 966
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
+ F+ ++ + EAERAI +NGT P P+TVK+A
Sbjct: 144 IAFVLYEHQYEAERAIHNVNGTTPPSFLHPLTVKYA 179
>gi|198470946|ref|XP_002133619.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
gi|198145693|gb|EDY72246.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
Length = 672
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+RF +R EA+ A+ LN T+P G +PI V+ A
Sbjct: 247 RGVAFVRFSKREEAQDALNTLNNTVPLGCTQPIWVRLA 284
>gi|195162221|ref|XP_002021954.1| GL14245 [Drosophila persimilis]
gi|194103852|gb|EDW25895.1| GL14245 [Drosophila persimilis]
Length = 618
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+RF +R EA+ A+ LN T+P G +PI V+ A
Sbjct: 247 RGVAFVRFSKREEAQDALNTLNNTVPLGCTQPIWVRLA 284
>gi|303286617|ref|XP_003062598.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456115|gb|EEH53417.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 380
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIA 57
T+ R GF++FD AE AI+E++G +G + VKFANS SS+ A
Sbjct: 154 TNTSRGFGFVKFDGVQSAESAIKEMHGKSVRG--RTLEVKFANSDSSATTAAA 204
>gi|66825827|ref|XP_646268.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60474730|gb|EAL72667.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 368
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 12 GFIRFDQRIEAERAIQELNG--TIPKGSNEPITVKFANSPSSSNKVI 56
GFI++ R E+E A++E++G T+P GSN PI VKFA++ K +
Sbjct: 149 GFIKYSTRDESENALREIDGKHTLP-GSNLPIIVKFADTERQKRKKL 194
>gi|262360006|gb|ACY56908.1| RH48596p [Drosophila melanogaster]
Length = 339
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
R + F+R+++R EA+ AI L IP+G ++P++V+ A
Sbjct: 237 RGVAFVRYNKREEAQEAISALKNVIPEGGSQPLSVRLA 274
>gi|66801427|ref|XP_629639.1| hypothetical protein DDB_G0292472 [Dictyostelium discoideum AX4]
gi|60463019|gb|EAL61215.1| hypothetical protein DDB_G0292472 [Dictyostelium discoideum AX4]
Length = 550
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN 47
T R +GF+ F QR EA +A+ +NG + PI VKFAN
Sbjct: 234 TGASRCVGFVHFSQRREALKAVSSMNGANIPFQSTPIYVKFAN 276
>gi|66802807|ref|XP_635247.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60463542|gb|EAL61727.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 489
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK 54
GFI+FD R A AI LNG GS P+ VKFA++ K
Sbjct: 134 GFIKFDNRESALSAIATLNGMKLDGSPNPLVVKFADTEKDKKK 176
>gi|307110890|gb|EFN59125.1| hypothetical protein CHLNCDRAFT_137936 [Chlorella variabilis]
Length = 1006
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 21 EAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAAAARRFG 74
+A AI LNG+ P+G+ +P+ V++A+SP+ A L Q++ FG
Sbjct: 687 QASAAIHALNGSFPRGAQQPLLVRYADSPAEKAAKQARKERLLQKQSSGPNLFG 740
>gi|357626291|gb|EHJ76427.1| putative ELAV-like protein 1 [Danaus plexippus]
Length = 370
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPL 59
+GF+ ++ R +AE AI +NG P I VKFAN PS++ P+
Sbjct: 136 IGFVCYETRQQAEDAITHMNGQSPIPGAGAIVVKFANKPSANKNAPRPI 184
>gi|157115109|ref|XP_001658116.1| single-stranded DNA-binding protein mssp-1 [Aedes aegypti]
gi|108877020|gb|EAT41245.1| AAEL007091-PA, partial [Aedes aegypti]
Length = 412
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS 50
+GF R + R + E+ IQ NGT +G+ EP+ VKFA+ S
Sbjct: 187 VGFARMESREKCEQIIQMFNGTQLQGAKEPLLVKFADGGS 226
>gi|340383573|ref|XP_003390291.1| PREDICTED: protein alan shepard-like, partial [Amphimedon
queenslandica]
Length = 443
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVI 56
+ + R +GF+R D R E+A + LN TI G++ + +KFA+S + K I
Sbjct: 284 SGYSRGVGFVRLDSRENCEKAREALNNTIFPGTDLELNIKFADSGNYKRKSI 335
>gi|330801309|ref|XP_003288671.1| hypothetical protein DICPUDRAFT_152921 [Dictyostelium purpureum]
gi|325081293|gb|EGC34814.1| hypothetical protein DICPUDRAFT_152921 [Dictyostelium purpureum]
Length = 348
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 12 GFIRFDQRIEAERAIQELNG--TIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
GFI+F R E+E A++EL+ T+P GSN P+ VKFA++ K L TPQ
Sbjct: 148 GFIKFSTRDESENALRELDQKHTVP-GSNLPLIVKFADTERQKRK---KLLGQPTPQ 200
>gi|157108361|ref|XP_001650191.1| hypothetical protein AaeL_AAEL014999 [Aedes aegypti]
gi|108868546|gb|EAT32771.1| AAEL014999-PA, partial [Aedes aegypti]
Length = 226
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN 47
GF R + R + E+ IQ NGT +G+ EP+ VKFA+
Sbjct: 1 GFARMESREKCEQIIQMFNGTQLQGAKEPLLVKFAD 36
>gi|281203518|gb|EFA77718.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 341
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 12 GFIRFDQRIEAERAIQELNGTIP-KGSNEPITVKFANSPSSSNK 54
GFI+F R EAE AI+EL+G GS+ P+ VKFA++ K
Sbjct: 144 GFIKFSAREEAEDAIRELDGKHTFAGSSIPLIVKFADTERQKRK 187
>gi|198425734|ref|XP_002119812.1| PREDICTED: similar to HUC, partial [Ciona intestinalis]
Length = 408
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTI-PKGSNEPITVKFANS 48
T+ C +GF+ F+ + EA AI+ LNG + + S P+ VKFA +
Sbjct: 206 TNLCSGIGFVLFNTKDEAMAAIKALNGAVFSQASTSPLVVKFAKT 250
>gi|170045947|ref|XP_001850551.1| single-stranded DNA-binding protein mssp-1 [Culex quinquefasciatus]
gi|167868784|gb|EDS32167.1| single-stranded DNA-binding protein mssp-1 [Culex quinquefasciatus]
Length = 416
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS 50
+GF R + R + E+ IQ NGT +G+ EP+ VKFA+ S
Sbjct: 191 VGFARMESREKCEQIIQIFNGTQLQGAKEPLLVKFADGGS 230
>gi|443690134|gb|ELT92349.1| hypothetical protein CAPTEDRAFT_169706 [Capitella teleta]
Length = 383
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
+GFI F+ R +AE AI L+G +P+G P VK A
Sbjct: 189 VGFILFNTRDQAENAISHLDGFVPEGGELPFNVKHA 224
>gi|66821129|ref|XP_644081.1| RNA recognition motif-containing protein RRM [Dictyostelium
discoideum AX4]
gi|60472201|gb|EAL70154.1| RNA recognition motif-containing protein RRM [Dictyostelium
discoideum AX4]
Length = 904
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGT-IPKGSNEPITVKFANS 48
++ GF+RF ++A +AI +NG I K S P+ VK+A++
Sbjct: 237 KFAGFVRFSSELDASKAIDAMNGVRINKDSGYPLVVKYADT 277
>gi|395750501|ref|XP_002828742.2| PREDICTED: ELAV-like protein 3 [Pongo abelii]
Length = 275
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLT 64
T R +GFIRFD+RIEAE + Q LNG P + +FAN+ + +V L L
Sbjct: 74 TGVSRGVGFIRFDKRIEAE-SYQGLNGQKPLAQLSHHS-QFANTRMAPGRVPPSLQPSLN 131
Query: 65 PQAAAARRFG 74
P A R G
Sbjct: 132 PIPAEGRDAG 141
>gi|195395310|ref|XP_002056279.1| GJ10859 [Drosophila virilis]
gi|194142988|gb|EDW59391.1| GJ10859 [Drosophila virilis]
Length = 388
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSS 51
FT R + F+RFD + A+ AI +NG +G + P+ V+ A P +
Sbjct: 151 FTGLSRGIAFVRFDLKSSADMAISVMNGYTLEGGSFPLQVRLAKRPKA 198
>gi|307200250|gb|EFN80529.1| Hrp65 protein [Harpegnathos saltator]
Length = 589
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYL 63
F + + F+R D RI AE+A EL+GT+ KG + V+FA P SS I L ++
Sbjct: 204 FVNKEKSFAFLRMDYRINAEKAKHELDGTVRKG--RALKVRFA--PHSSTIKIKNLTPWI 259
Query: 64 T 64
+
Sbjct: 260 S 260
>gi|225713126|gb|ACO12409.1| Sex-lethal homolog [Lepeophtheirus salmonis]
gi|290561258|gb|ADD38031.1| Sex-lethal homolog [Lepeophtheirus salmonis]
Length = 255
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAAAA 70
+ F+R+ ++ EA+ AI LNGT+ G+++P+ VK A N Y P A
Sbjct: 159 VAFVRYSKQSEAKDAITALNGTMMTGNDKPMLVKVAEEHGKQN------VRYFMPNWAGE 212
Query: 71 RRFG 74
+ G
Sbjct: 213 QHGG 216
>gi|405965429|gb|EKC30805.1| RNA-binding motif, single-stranded-interacting protein 3
[Crassostrea gigas]
Length = 336
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVI 56
R +GF R + + + ER I + NG I G EP+ VKFA+ + I
Sbjct: 145 RGVGFSRMESKEKCERIIDQFNGKILPGCTEPLLVKFADGGNKKKTAI 192
>gi|328724646|ref|XP_001948737.2| PREDICTED: protein alan shepard-like [Acyrthosiphon pisum]
Length = 471
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANS 48
+GF R D + + E+ IQ NG GS EP+ VKFA+S
Sbjct: 244 VGFARMDSKEKCEQIIQMFNGNPLPGSKEPLLVKFADS 281
>gi|328873245|gb|EGG21612.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 370
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 12 GFIRFDQRIEAERAIQELNG--TIPKGSNEPITVKFANSPSSSNK 54
GF++F R EAE AI++++ T+P GS PI VKFA++ K
Sbjct: 145 GFVKFSMREEAEEAIRDMDSKQTLP-GSTLPIIVKFADTERQKRK 188
>gi|384484722|gb|EIE76902.1| hypothetical protein RO3G_01606 [Rhizopus delemar RA 99-880]
Length = 204
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK 54
T R GF+RF + E ++A+ E+NG + K N P+ V FA +P ++N+
Sbjct: 6 TGLSRGYGFVRFSDQQEQQQAVTEMNGILCK--NRPMRVSFA-TPKTNNQ 52
>gi|389746458|gb|EIM87638.1| hypothetical protein STEHIDRAFT_168333 [Stereum hirsutum FP-91666
SS1]
Length = 882
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEP---ITVKFANS 48
R + F+R D R E I+ L+G + +G N+P I+V+FA+S
Sbjct: 321 RIIAFVRLDSRDACEEVIERLHGRMVRGWNDPGSRISVRFADS 363
>gi|239938030|gb|ACS36114.1| RNA-binding protein Elav2 [Capitella teleta]
Length = 341
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
+GFI F+ R +AE AI L+G +P+G P VK A
Sbjct: 147 VGFILFNTRDQAENAISHLDGFVPEGGELPFNVKHA 182
>gi|300123637|emb|CBK24909.2| unnamed protein product [Blastocystis hominis]
Length = 581
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 12 GFIRFDQRIEAERAIQELNG-TIPKGSNEPITVKFANSPS 50
GF R+D R A +AI+ LNG T GS + VKFA++P+
Sbjct: 97 GFCRYDSRDNAFQAIKALNGKTYLHGSTTSLVVKFADTPN 136
>gi|328875992|gb|EGG24356.1| RNA recognition motif-containing protein RRM [Dictyostelium
fasciculatum]
Length = 770
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANS 48
GF+RFD +A +AIQ +NG + P+ VK+A++
Sbjct: 219 GFVRFDNEADATKAIQAMNGAKMGADSTPLVVKYADN 255
>gi|238576422|ref|XP_002388030.1| hypothetical protein MPER_13005 [Moniliophthora perniciosa FA553]
gi|215448977|gb|EEB88960.1| hypothetical protein MPER_13005 [Moniliophthora perniciosa FA553]
Length = 419
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 32/48 (66%), Gaps = 4/48 (8%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEP---ITVKFANS 48
FT+ ++ F+R + R+ AE I+ L+G + +G N+P I+V+FA++
Sbjct: 29 FTE-ASFMAFVRLETRVGAEEVIERLHGRMVRGWNDPGSRISVRFADT 75
>gi|427786805|gb|JAA58854.1| Putative rna-binding protein elav/hu rrm superfamily [Rhipicephalus
pulchellus]
Length = 402
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN 47
R +GF R + + + E+ I NG + GS EP+ VKFA+
Sbjct: 188 SRGVGFARMESKEKCEQIIATFNGKVLPGSKEPLLVKFAD 227
>gi|384490634|gb|EIE81856.1| hypothetical protein RO3G_06561 [Rhizopus delemar RA 99-880]
Length = 420
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS 50
R +GF R R A I++ NG + +GS+ P+ V+FA+SP+
Sbjct: 319 ISRGVGFARMTDREAASAIIEKFNGYVIEGSSAPLQVRFADSPA 362
>gi|353233223|emb|CCD80578.1| putative single-stranded DNA-binding protein mssp-1 [Schistosoma
mansoni]
Length = 955
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 3 GFTDFCRYLGFIRFDQRIEAERAIQELNGT--IPKGSNEPITVKFANSPSSSNKVIAP-- 58
GFT +GF+RF +AE+A++++N I +G ++PIT K A+ + AP
Sbjct: 325 GFTG----IGFVRFATAEQAEKAVEQMNEAKHIVRGGDKPITCKLADKADPRRRNAAPSA 380
Query: 59 ----LAAYLTPQAAAA 70
AA L PQ A
Sbjct: 381 QAFVAAAGLHPQIPVA 396
>gi|256086257|ref|XP_002579318.1| single-stranded DNA-binding protein mssp-1 [Schistosoma mansoni]
Length = 956
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 3 GFTDFCRYLGFIRFDQRIEAERAIQELNGT--IPKGSNEPITVKFANSPSSSNKVIAP-- 58
GFT +GF+RF +AE+A++++N I +G ++PIT K A+ + AP
Sbjct: 325 GFTG----IGFVRFATAEQAEKAVEQMNEAKHIVRGGDKPITCKLADKADPRRRNAAPSA 380
Query: 59 ----LAAYLTPQAAAA 70
AA L PQ A
Sbjct: 381 QAFVAAAGLHPQIPVA 396
>gi|427786813|gb|JAA58858.1| Putative rna-binding protein elav/hu rrm superfamily [Rhipicephalus
pulchellus]
Length = 341
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN 47
R +GF R + + + E+ I NG + GS EP+ VKFA+
Sbjct: 189 RGVGFARMESKEKCEQIIATFNGKVLPGSKEPLLVKFAD 227
>gi|187097098|ref|NP_001119609.1| sex-lethal [Acyrthosiphon pisum]
gi|98986311|tpe|CAJ55783.1| TPA: sex-lethal [Acyrthosiphon pisum]
gi|239792967|dbj|BAH72757.1| ACYPI000005 [Acyrthosiphon pisum]
Length = 205
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 30/43 (69%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
++ R + F+R++++ +A++AI +LNG + +G E ++VK A
Sbjct: 131 YSGLPRGVAFVRYNKKEDAQKAIIQLNGVLLEGCTEHLSVKIA 173
>gi|151946599|gb|EDN64821.1| glucose-repressible RNA binding protein [Saccharomyces cerevisiae
YJM789]
Length = 670
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN 53
GF++F++RI+AE +IQ L G I GS PI + + PSSSN
Sbjct: 398 GFVKFEKRIDAEASIQGLQGFIVGGS--PIRLSWGR-PSSSN 436
>gi|323349799|gb|EGA84014.1| Ngr1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 593
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN 53
GF++F++RI+AE +IQ L G I GS PI + + PSSSN
Sbjct: 397 GFVKFEKRIDAEASIQGLQGFIVGGS--PIRLSWGR-PSSSN 435
>gi|323338729|gb|EGA79945.1| Ngr1p [Saccharomyces cerevisiae Vin13]
Length = 594
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN 53
GF++F++RI+AE +IQ L G I GS PI + + PSSSN
Sbjct: 398 GFVKFEKRIDAEASIQGLQGFIVGGS--PIRLSWGR-PSSSN 436
>gi|158295088|ref|XP_316007.4| AGAP005964-PB [Anopheles gambiae str. PEST]
gi|157015868|gb|EAA10943.4| AGAP005964-PB [Anopheles gambiae str. PEST]
Length = 365
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS 50
+GF R + R + E+ IQ NGT+ + EP+ VKFA+ S
Sbjct: 137 VGFARMESRDKCEQIIQIFNGTLLPNAKEPLLVKFADGGS 176
>gi|383861809|ref|XP_003706377.1| PREDICTED: hrp65 protein-like [Megachile rotundata]
Length = 566
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYL 63
F + + F+R D R+ AE+A EL+GT+ KG + V+FA P SS I L ++
Sbjct: 180 FVNKEKNFAFLRMDYRVNAEKAKHELDGTMRKG--RALKVRFA--PHSSTIKIKNLTPWI 235
Query: 64 T 64
+
Sbjct: 236 S 236
>gi|323356144|gb|EGA87949.1| Ngr1p [Saccharomyces cerevisiae VL3]
Length = 562
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN 53
GF++F++RI+AE +IQ L G I GS PI + + PSSSN
Sbjct: 290 GFVKFEKRIDAEASIQGLQGFIVGGS--PIRLSWG-RPSSSN 328
>gi|207347548|gb|EDZ73682.1| YBR212Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 617
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN 53
GF++F++RI+AE +IQ L G I GS PI + + PSSSN
Sbjct: 398 GFVKFEKRIDAEASIQGLQGFIVGGS--PIRLSWG-RPSSSN 436
>gi|365761964|gb|EHN03583.1| Ngr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 666
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN 53
GF++F++RI+AE +IQ L G I GS PI + + PSSSN
Sbjct: 397 GFVKFEKRIDAEASIQGLQGFIVGGS--PIRLSWG-RPSSSN 435
>gi|392301060|gb|EIW12149.1| Ngr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 670
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN 53
GF++F++RI+AE +IQ L G I GS PI + + PSSSN
Sbjct: 398 GFVKFEKRIDAEASIQGLQGFIVGGS--PIRLSWG-RPSSSN 436
>gi|256270156|gb|EEU05383.1| Ngr1p [Saccharomyces cerevisiae JAY291]
Length = 673
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN 53
GF++F++RI+AE +IQ L G I GS PI + + PSSSN
Sbjct: 398 GFVKFEKRIDAEASIQGLQGFIVGGS--PIRLSWG-RPSSSN 436
>gi|4031|emb|CAA78478.1| Negative growth regulatory protein [Saccharomyces cerevisiae]
Length = 672
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN 53
GF++F++RI+AE +IQ L G I GS PI + + PSSSN
Sbjct: 398 GFVKFEKRIDAEASIQGLQGFIVGGS--PIRLSWG-RPSSSN 436
>gi|398365523|ref|NP_009771.3| Ngr1p [Saccharomyces cerevisiae S288c]
gi|585555|sp|P32831.2|NGR1_YEAST RecName: Full=Negative growth regulatory protein NGR1; AltName:
Full=RNA-binding protein RBP1
gi|536596|emb|CAA85176.1| NGR1 [Saccharomyces cerevisiae]
gi|285810543|tpg|DAA07328.1| TPA: Ngr1p [Saccharomyces cerevisiae S288c]
Length = 672
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN 53
GF++F++RI+AE +IQ L G I GS PI + + PSSSN
Sbjct: 398 GFVKFEKRIDAEASIQGLQGFIVGGS--PIRLSWG-RPSSSN 436
>gi|190408636|gb|EDV11901.1| glucose-repressible RNA binding protein [Saccharomyces cerevisiae
RM11-1a]
gi|290878229|emb|CBK39288.1| Ngr1p [Saccharomyces cerevisiae EC1118]
Length = 670
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN 53
GF++F++RI+AE +IQ L G I GS PI + + PSSSN
Sbjct: 398 GFVKFEKRIDAEASIQGLQGFIVGGS--PIRLSWG-RPSSSN 436
>gi|365766915|gb|EHN08404.1| Ngr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 669
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN 53
GF++F++RI+AE +IQ L G I GS PI + + PSSSN
Sbjct: 397 GFVKFEKRIDAEASIQGLQGFIVGGS--PIRLSWG-RPSSSN 435
>gi|349576587|dbj|GAA21758.1| K7_Ngr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 671
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSN 53
GF++F++RI+AE +IQ L G I GS PI + + PSSSN
Sbjct: 398 GFVKFEKRIDAEASIQGLQGFIVGGS--PIRLSWG-RPSSSN 436
>gi|313230196|emb|CBY07900.1| unnamed protein product [Oikopleura dioica]
Length = 423
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T + + FIR+D R+EAERA++ ++ +G E +TVKFA
Sbjct: 243 TGLSKGVAFIRYDTRVEAERAVKHMHHFNYEG--EVLTVKFA 282
>gi|330798463|ref|XP_003287272.1| hypothetical protein DICPUDRAFT_151346 [Dictyostelium purpureum]
gi|325082732|gb|EGC36205.1| hypothetical protein DICPUDRAFT_151346 [Dictyostelium purpureum]
Length = 518
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNG-TIPKGSNEPITVKF 45
T R +GF+ F QR EA +A+ +NG TIP SN PI VK+
Sbjct: 258 TGASRCVGFVHFSQRREALKALSLMNGATIPYQSN-PIYVKY 298
>gi|225711268|gb|ACO11480.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 197
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 13 FIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTP-QAAAAR 71
F+ FD +A+ A++ L+GT+ +G + I V+ A P +++K + P QA +
Sbjct: 54 FVEFDHNRDADHALERLDGTLFRG--QRIVVEIARGPKTADKYLFRGGMDREPTQATWVQ 111
Query: 72 RFGGP 76
++G P
Sbjct: 112 KYGAP 116
>gi|225711430|gb|ACO11561.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 186
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTP-QAAA 69
F+ FD +A+ A++ L+GT+ +G I V+ A P +++K + P QA
Sbjct: 52 FAFVEFDHNRDADHALERLDGTLFRGQR--IVVEIARGPKTADKYLFRGGMDREPTQATW 109
Query: 70 ARRFGGP 76
+++G P
Sbjct: 110 VQKYGAP 116
>gi|384491739|gb|EIE82935.1| hypothetical protein RO3G_07640 [Rhizopus delemar RA 99-880]
Length = 451
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQ 66
R +GF R +R A I+ NG +GS+ P+ V+FA+SP+ L Q
Sbjct: 305 ISRGVGFARMSERNAATAIIERFNGHSIEGSSAPLQVRFADSPAQKK---------LKSQ 355
Query: 67 AAAARR 72
+AA RR
Sbjct: 356 SAARRR 361
>gi|357612546|gb|EHJ68054.1| hypothetical protein KGM_06271 [Danaus plexippus]
Length = 441
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN 47
+GF R + R + E+ IQ NG G+ EP+ VKFA+
Sbjct: 243 VGFARMESREKCEQIIQMFNGNPIPGAKEPLLVKFAD 279
>gi|340380143|ref|XP_003388583.1| PREDICTED: CUGBP Elav-like family member 4-like [Amphimedon
queenslandica]
Length = 494
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 7 FCRYLGFIRFDQRIEAERAIQELNGT-IPKGSNEPITVKFANS 48
+ R FI+F R EA+ AI E++G+ I G++ P+ VK+A++
Sbjct: 184 YSRGCAFIKFSSRQEAQSAINEMHGSEIMAGASNPLVVKYADT 226
>gi|281206149|gb|EFA80338.1| RNA recognition motif-containing protein RRM [Polysphondylium
pallidum PN500]
Length = 640
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANS 48
GF+RF +A +A+Q +NGT K S P+ VK+A++
Sbjct: 200 GFVRFCNEADATKAMQAMNGTKMKDSPAPLVVKYADN 236
>gi|158295086|ref|XP_001688763.1| AGAP005964-PA [Anopheles gambiae str. PEST]
gi|157015867|gb|EDO63769.1| AGAP005964-PA [Anopheles gambiae str. PEST]
Length = 453
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS 50
+GF R + R + E+ IQ NGT+ + EP+ VKFA+ S
Sbjct: 225 VGFARMESRDKCEQIIQIFNGTLLPNAKEPLLVKFADGGS 264
>gi|195127381|ref|XP_002008147.1| GI11982 [Drosophila mojavensis]
gi|251765068|sp|B4KX02.1|SHEP_DROMO RecName: Full=Protein alan shepard
gi|193919756|gb|EDW18623.1| GI11982 [Drosophila mojavensis]
Length = 592
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN 47
+GF R + R + E+ IQ NG G+ +P+ VKFA+
Sbjct: 361 VGFARMESREKCEQIIQMFNGNTITGAKDPLLVKFAD 397
>gi|195376319|ref|XP_002046944.1| GJ12205 [Drosophila virilis]
gi|194154102|gb|EDW69286.1| GJ12205 [Drosophila virilis]
Length = 868
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN 47
+GF R + R + E+ IQ NG G+ +P+ VKFA+
Sbjct: 637 VGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFAD 673
>gi|71010968|ref|XP_758439.1| hypothetical protein UM02292.1 [Ustilago maydis 521]
gi|46097994|gb|EAK83227.1| hypothetical protein UM02292.1 [Ustilago maydis 521]
Length = 1244
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R +GF+ F+ ++EA+RA++ELN T +G I+V A++ S A +A
Sbjct: 1014 RGIGFVDFESQLEAQRAMRELNSTKWRGKT--ISVTIADTRSHGASCSAQREDVQERRAK 1071
Query: 69 AARRFGGPI 77
+ R G P+
Sbjct: 1072 SVRVTGLPV 1080
>gi|195014142|ref|XP_001983966.1| GH15273 [Drosophila grimshawi]
gi|251765067|sp|B4IX08.1|SHEP_DROGR RecName: Full=Protein alan shepard
gi|193897448|gb|EDV96314.1| GH15273 [Drosophila grimshawi]
Length = 609
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN 47
+GF R + R + E+ IQ NG G+ +P+ VKFA+
Sbjct: 378 VGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFAD 414
>gi|194866955|ref|XP_001971976.1| GG14139 [Drosophila erecta]
gi|251765066|sp|B3NGA1.1|SHEP_DROER RecName: Full=Protein alan shepard
gi|190653759|gb|EDV51002.1| GG14139 [Drosophila erecta]
Length = 582
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN 47
+GF R + R + E+ IQ NG G+ +P+ VKFA+
Sbjct: 352 VGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFAD 388
>gi|195491940|ref|XP_002093780.1| GE20568 [Drosophila yakuba]
gi|251765013|sp|B4PIS2.1|SHEP_DROYA RecName: Full=Protein alan shepard
gi|194179881|gb|EDW93492.1| GE20568 [Drosophila yakuba]
Length = 582
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN 47
+GF R + R + E+ IQ NG G+ +P+ VKFA+
Sbjct: 352 VGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFAD 388
>gi|251765112|sp|B4LFQ9.2|SHEP_DROVI RecName: Full=Protein alan shepard
Length = 595
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN 47
+GF R + R + E+ IQ NG G+ +P+ VKFA+
Sbjct: 364 VGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFAD 400
>gi|442630336|ref|NP_001261439.1| alan shepard, isoform H [Drosophila melanogaster]
gi|440215327|gb|AGB94134.1| alan shepard, isoform H [Drosophila melanogaster]
Length = 371
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN-SPSSSNKVIAPLAAYLTPQAAA 69
+GF R + R + E+ IQ NG G+ +P+ VKFA+ P N P P A A
Sbjct: 151 VGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKKNLFKTP-----DPNARA 205
Query: 70 AR 71
R
Sbjct: 206 WR 207
>gi|320580282|gb|EFW94505.1| RNA binding protein [Ogataea parapolymorpha DL-1]
Length = 398
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVI-APLAAYLTPQ 66
GF++F QR +AERAI++L G + GS V+ + S+ N ++ AP A PQ
Sbjct: 288 GFVKFTQRTDAERAIEQLQGYVIDGSR----VRLSWGRSNRNHLLAAPGLAAGMPQ 339
>gi|198437014|ref|XP_002120739.1| PREDICTED: similar to paraspeckle component 1 [Ciona intestinalis]
Length = 531
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 4 FTDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSS-SNKVIAPLAA 61
F + + GF+R D R AERA EL+G + + SN + V+FA ++ S K I+P +
Sbjct: 151 FVNAEKGFGFVRMDTRTNAERAKWELDGKVMR-SNRQLRVRFATHGAALSVKNISPFVS 208
>gi|195133248|ref|XP_002011051.1| GI16327 [Drosophila mojavensis]
gi|193907026|gb|EDW05893.1| GI16327 [Drosophila mojavensis]
Length = 716
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 13/77 (16%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAYLTPQAA 68
R + F+R + EA+ AI+ LN T+P+G ++PI V+ A + AA Q
Sbjct: 377 RGVAFVRGE---EAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAK------AAQFMSQIG 427
Query: 69 AARRFGGP----IHHAG 81
G P HH G
Sbjct: 428 GGPHMGQPQPPLPHHMG 444
>gi|442630338|ref|NP_729057.3| alan shepard, isoform I [Drosophila melanogaster]
gi|440215328|gb|AAF50792.4| alan shepard, isoform I [Drosophila melanogaster]
Length = 377
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN-SPSSSNKVIAPLAAYLTPQAAA 69
+GF R + R + E+ IQ NG G+ +P+ VKFA+ P N P P A A
Sbjct: 151 VGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKKNLFKTP-----DPNARA 205
Query: 70 AR 71
R
Sbjct: 206 WR 207
>gi|388854599|emb|CCF51756.1| uncharacterized protein [Ustilago hordei]
Length = 1235
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK 54
R +GF+ F+ ++A RA++ELN T K + I+V A+S SS++K
Sbjct: 993 RGIGFVDFENALDATRAMKELNST--KWRAKTISVTLADSRSSNSK 1036
>gi|281365675|ref|NP_001163350.1| alan shepard, isoform E [Drosophila melanogaster]
gi|442630334|ref|NP_001261438.1| alan shepard, isoform G [Drosophila melanogaster]
gi|20151883|gb|AAM11301.1| RH63980p [Drosophila melanogaster]
gi|272455055|gb|ACZ94622.1| alan shepard, isoform E [Drosophila melanogaster]
gi|440215326|gb|AGB94133.1| alan shepard, isoform G [Drosophila melanogaster]
Length = 379
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN-SPSSSNKVIAPLAAYLTPQAAA 69
+GF R + R + E+ IQ NG G+ +P+ VKFA+ P N P P A A
Sbjct: 153 VGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKKNLFKTP-----DPNARA 207
Query: 70 AR 71
R
Sbjct: 208 WR 209
>gi|11045077|emb|CAB41488.2| putative FCA orthologue [Brassica napus]
Length = 384
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIP-KGSNEPITVKFAN----SPSSSNKVIAPLAAYL 63
R GF+++ + A AI LNGT +G N+P+ V+FA+ P S +V P+
Sbjct: 236 RGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFADPKRPKPGESREVAHPVGLGS 295
Query: 64 TP--QAAAAR 71
P QA+ R
Sbjct: 296 GPRFQASGPR 305
>gi|427786809|gb|JAA58856.1| Putative rna-binding protein elav/hu rrm superfamily [Rhipicephalus
pulchellus]
Length = 365
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN 47
R +GF R + + + E+ I NG + GS EP+ VKFA+
Sbjct: 189 RGVGFARMESKEKCEQIIATFNGKVLPGSKEPLLVKFAD 227
>gi|298710320|emb|CBJ31940.1| Xel-1 protein [Ectocarpus siliculosus]
Length = 573
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 5 TDFCRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFA 46
T R F++FD R EA+ A++ +NG + G+ + + VKFA
Sbjct: 225 TTISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFA 266
>gi|443707253|gb|ELU02931.1| hypothetical protein CAPTEDRAFT_154976 [Capitella teleta]
Length = 417
Score = 34.7 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 9 RYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANS 48
R +GF R + + + E+ IQ NG G EP+TVK A+S
Sbjct: 251 RGVGFARMESKDKCEQIIQTFNGQKIPGHMEPLTVKLADS 290
>gi|397632370|gb|EJK70525.1| hypothetical protein THAOC_08111, partial [Thalassiosira oceanica]
Length = 548
Score = 34.7 bits (78), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 13 FIRFDQRIEAERAIQELNGTIP-KGSNEPITVKFAN 47
F+++ +R AERAI+ L+G + +G + P+ VKFAN
Sbjct: 168 FVKYRERSMAERAIEALDGELQLEGVDRPLKVKFAN 203
>gi|16768648|gb|AAL28543.1| HL01227p [Drosophila melanogaster]
Length = 322
Score = 34.7 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN-SPSSSNKVIAPLAAYLTPQAAA 69
+GF R + R + E+ IQ NG G+ +P+ VKFA+ P N P P A A
Sbjct: 266 VGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKKNLFKTP-----DPNARA 320
Query: 70 AR 71
R
Sbjct: 321 WR 322
>gi|324507276|gb|ADY43089.1| RNA-binding motif, single-stranded-interacting protein 1 [Ascaris
suum]
Length = 673
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 1 MKGFTDFCRYLGFIRFDQRIEAERAIQELNGT-IPKGSNEPITVKFANSPSSSNKVIAPL 59
+K R +GF R D++ ++ I+E+NG I S +P+ VKFA+S P+
Sbjct: 416 LKNQDGASRGVGFARMDKKELCDQIIREMNGKLIINNSTQPLLVKFADSGKKPKTRTLPM 475
Query: 60 A 60
A
Sbjct: 476 A 476
>gi|326534302|dbj|BAJ89501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 447
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSP----SSSNKVIAPLAAY 62
GFIR+ EA AIQ NG + +G +PI + N P +SS + P+A+Y
Sbjct: 321 FGFIRYSTHGEAALAIQMANGLVVRG--KPIKCSWGNKPTPPGTSSKPLPPPIASY 374
>gi|312376709|gb|EFR23717.1| hypothetical protein AND_12364 [Anopheles darlingi]
Length = 293
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPS 50
+GF R + R + E+ IQ NG G+ EP+ VKFA+ S
Sbjct: 59 VGFARMESRDKCEQIIQMFNGNQLPGAKEPLLVKFADGGS 98
>gi|405123946|gb|AFR98709.1| nucleolar protein 4 [Cryptococcus neoformans var. grubii H99]
Length = 994
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSS 51
+G++ F + +A+RAIQEL+G G N I VK+A+ +S
Sbjct: 67 VGYVTFSLKEDADRAIQELDGGSFGGGNRKIQVKWADERAS 107
>gi|297800520|ref|XP_002868144.1| hypothetical protein ARALYDRAFT_493257 [Arabidopsis lyrata subsp.
lyrata]
gi|297313980|gb|EFH44403.1| hypothetical protein ARALYDRAFT_493257 [Arabidopsis lyrata subsp.
lyrata]
Length = 547
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIP-KGSNEPITVKFAN----SPSSSNKVIAPLA 60
R GF+++ + A AI LNGT +G N+P+ V+FA+ P S + AP+
Sbjct: 257 SRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFADPKRPKPGESRDMTAPVG 314
>gi|58262518|ref|XP_568669.1| hypothetical protein CNN01920 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134119018|ref|XP_772011.1| hypothetical protein CNBN1890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254615|gb|EAL17364.1| hypothetical protein CNBN1890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230843|gb|AAW47152.1| hypothetical protein CNN01920 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 942
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSS 51
+G++ F + +A+RAIQEL+G GS I VK+A+ +S
Sbjct: 67 VGYVTFSLKEDADRAIQELDGGSFGGSKRKIQVKWADERAS 107
>gi|171846506|gb|AAI61767.1| syncrip protein [Xenopus (Silurana) tropicalis]
Length = 638
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK 54
FI FD+R+ A +A++E+NG +G N I + FA P K
Sbjct: 389 AFIHFDERVGAVKAMEEMNGKELEGEN--IEIVFAKPPDQKRK 429
>gi|24658237|ref|NP_729055.1| alan shepard, isoform B [Drosophila melanogaster]
gi|24658244|ref|NP_729056.1| alan shepard, isoform D [Drosophila melanogaster]
gi|23095748|gb|AAF50790.2| alan shepard, isoform B [Drosophila melanogaster]
gi|23095749|gb|AAN12240.1| alan shepard, isoform D [Drosophila melanogaster]
Length = 499
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 11 LGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFAN-SPSSSNKVIAP 58
+GF R + R + E+ IQ NG G+ +P+ VKFA+ P N P
Sbjct: 266 VGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKKNLFKTP 314
>gi|47204902|emb|CAF92517.1| unnamed protein product [Tetraodon nigroviridis]
Length = 244
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 8 CRYLGFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAPLAAY 62
CR GF++F + E ++AI+E GT+ G +++ A S S+ P Y
Sbjct: 22 CRGYGFVKFGEESEQKKAIEECQGTVLSGKALRLSIAVAKSQKMSSSQGGPGQNY 76
>gi|301608798|ref|XP_002933974.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Xenopus
(Silurana) tropicalis]
Length = 770
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 12 GFIRFDQRIEAERAIQELNGTIPKGSNEPITVKFANSPSSSNK 54
FI FD+R+ A +A++E+NG +G N I + FA P K
Sbjct: 521 AFIHFDERVGAVKAMEEMNGKELEGEN--IEIVFAKPPDQKRK 561
>gi|397475956|ref|XP_003809379.1| PREDICTED: thioredoxin domain-containing protein 2 [Pan paniscus]
Length = 372
Score = 34.3 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 22 AERAIQELNGTIPKGSNEPITVKFANSPSSSNKVIAP 58
+E+AIQ G IPK S +PI K N P +S K P
Sbjct: 137 SEKAIQPREGNIPKSSAKPIQPKLGNIPKASMKPSQP 173
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,348,323,837
Number of Sequences: 23463169
Number of extensions: 47613053
Number of successful extensions: 141309
Number of sequences better than 100.0: 632
Number of HSP's better than 100.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 139549
Number of HSP's gapped (non-prelim): 1564
length of query: 83
length of database: 8,064,228,071
effective HSP length: 54
effective length of query: 29
effective length of database: 6,797,216,945
effective search space: 197119291405
effective search space used: 197119291405
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)