Query psy6358
Match_columns 1945
No_of_seqs 1082 out of 7126
Neff 7.6
Searched_HMMs 29240
Date Sat Aug 17 00:27:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6358.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6358hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eto_A Neurogenic locus notch 100.0 4.1E-43 1.4E-47 389.0 7.8 222 1458-1736 13-236 (242)
2 2oo4_A Notch 2, neurogenic loc 100.0 4.2E-39 1.4E-43 360.4 6.9 216 1458-1736 12-229 (234)
3 3i08_A Neurogenic locus notch 100.0 4.1E-34 1.4E-38 309.3 5.4 166 1458-1623 13-180 (220)
4 4fbr_A Lectin, myxobacterial h 99.9 9.1E-32 3.1E-36 307.0 -18.6 251 161-466 5-265 (267)
5 4fbr_A Lectin, myxobacterial h 99.9 1.1E-30 3.8E-35 298.0 -15.7 249 1066-1348 6-264 (267)
6 2vj3_A Neurogenic locus notch 99.8 1.6E-21 5.6E-26 206.0 11.9 123 1315-1437 3-127 (135)
7 2vj3_A Neurogenic locus notch 99.8 5.6E-21 1.9E-25 201.9 11.7 122 1278-1399 4-127 (135)
8 1z1y_A Ookinete surface protei 99.8 2E-21 6.9E-26 217.2 2.8 145 268-418 8-174 (186)
9 1z1y_A Ookinete surface protei 99.8 4.2E-21 1.4E-25 214.7 3.4 145 1283-1430 9-176 (186)
10 4gpm_A Engineered protein OR26 99.8 7E-19 2.4E-23 193.6 14.0 102 1822-1923 48-164 (169)
11 2ygq_A WIF-1, WNT inhibitory f 99.8 1.3E-19 4.3E-24 218.7 7.2 168 258-472 143-310 (324)
12 4gpm_A Engineered protein OR26 99.8 7.4E-19 2.5E-23 193.4 9.7 109 1808-1923 8-131 (169)
13 2ygq_A WIF-1, WNT inhibitory f 99.7 8E-19 2.8E-23 211.7 7.3 158 1247-1431 153-310 (324)
14 4d90_A EGF-like repeat and dis 99.7 2.2E-18 7.6E-23 184.1 9.8 125 1280-1430 1-134 (143)
15 4d90_A EGF-like repeat and dis 99.7 4.6E-18 1.6E-22 181.7 10.3 125 868-1021 1-134 (143)
16 2vj2_A Jagged-1; signalling, p 99.7 1.4E-18 4.9E-23 190.5 5.5 150 167-340 15-168 (169)
17 2vj2_A Jagged-1; signalling, p 99.7 1.2E-18 4.1E-23 191.1 4.7 150 1260-1429 15-169 (169)
18 3fcs_B Integrin beta-3; beta p 99.7 1.3E-17 4.3E-22 217.3 12.1 165 1243-1429 436-628 (690)
19 2jab_A H10-2-G3; HER2, darpin, 99.7 3.2E-17 1.1E-21 173.2 12.2 104 1808-1918 18-136 (136)
20 1yyh_A HN1;, notch 1, ankyrin 99.7 9.9E-18 3.4E-22 196.7 8.7 100 1822-1921 101-216 (253)
21 1d9s_A Cyclin-dependent kinase 99.7 1.1E-17 3.8E-22 176.7 8.2 105 1808-1920 16-136 (136)
22 3fcs_B Integrin beta-3; beta p 99.7 2.3E-17 7.7E-22 215.0 12.6 170 188-380 436-629 (690)
23 2f8y_A Notch homolog 1, transl 99.7 5.8E-17 2E-21 185.7 13.0 101 1822-1922 103-218 (223)
24 1n0r_A 4ANK, 4 ankyrin repeats 99.7 1.1E-16 3.7E-21 165.4 13.1 99 1822-1920 13-126 (126)
25 2rfm_A Putative ankyrin repeat 99.7 5.4E-17 1.8E-21 181.9 10.8 97 1822-1918 79-190 (192)
26 1oy3_D Transcription factor in 99.7 5.9E-17 2E-21 192.3 11.6 89 1837-1925 151-255 (282)
27 1ikn_D Protein (I-kappa-B-alph 99.7 4.5E-17 1.6E-21 188.7 9.7 102 1822-1923 56-179 (236)
28 1ihb_A P18-INK4C(INK6), cyclin 99.7 2.2E-16 7.5E-21 171.4 13.7 99 1822-1920 48-162 (162)
29 2y1l_E Darpin-8.4; hydrolase-i 99.7 2.6E-16 8.8E-21 172.7 14.3 104 1808-1918 51-169 (169)
30 2y1l_E Darpin-8.4; hydrolase-i 99.7 6.6E-17 2.3E-21 177.4 9.5 109 1808-1923 18-141 (169)
31 3v30_A DNA-binding protein rfx 99.7 8.6E-17 3E-21 176.7 10.3 108 1808-1922 40-162 (172)
32 3ljn_A Hypothetical protein; a 99.7 6.4E-17 2.2E-21 200.3 9.7 107 1815-1921 137-270 (364)
33 1yyh_A HN1;, notch 1, ankyrin 99.7 7.7E-17 2.6E-21 189.1 9.8 101 1822-1922 135-250 (253)
34 3aji_A 26S proteasome non-ATPa 99.7 6.8E-17 2.3E-21 186.2 9.0 102 1822-1923 84-200 (231)
35 2f8y_A Notch homolog 1, transl 99.7 1.3E-16 4.4E-21 182.8 10.3 109 1815-1923 57-186 (223)
36 1bi7_B P16INK4A, MTS1, multipl 99.7 9.2E-17 3.1E-21 173.9 8.4 109 1808-1924 16-140 (156)
37 2pnn_A Transient receptor pote 99.7 3.5E-17 1.2E-21 194.1 5.5 103 1822-1924 112-262 (273)
38 3f6q_A Integrin-linked protein 99.7 1.5E-16 5.2E-21 176.1 10.1 111 1808-1925 43-168 (179)
39 3v31_A Ankyrin repeat family A 99.7 4.9E-16 1.7E-20 169.8 14.0 100 1822-1921 14-128 (167)
40 1n0q_A 3ANK, 3 ankyrin repeats 99.6 3.8E-16 1.3E-20 153.4 11.4 87 1816-1920 2-93 (93)
41 3v31_A Ankyrin repeat family A 99.6 1.6E-16 5.4E-21 173.7 9.5 99 1822-1920 47-160 (167)
42 4b93_B Ankyrin repeat domain-c 99.6 2.2E-17 7.6E-22 195.8 2.9 99 1822-1920 97-210 (269)
43 4b93_B Ankyrin repeat domain-c 99.6 2.8E-16 9.6E-21 186.3 12.2 106 1815-1920 118-244 (269)
44 2dzn_A Probable 26S proteasome 99.6 2.9E-16 9.8E-21 180.4 12.0 105 1822-1926 83-206 (228)
45 1oy3_D Transcription factor in 99.6 1.2E-16 4.2E-21 189.6 9.0 102 1822-1923 56-220 (282)
46 2rfm_A Putative ankyrin repeat 99.6 1.1E-16 3.8E-21 179.3 8.0 102 1822-1923 46-162 (192)
47 3t8k_A Uncharacterized protein 99.6 2.2E-16 7.6E-21 176.5 10.3 95 1824-1918 55-177 (186)
48 3c5r_A BARD-1, BRCA1-associate 99.6 6.9E-17 2.4E-21 170.6 5.6 100 1822-1921 21-135 (137)
49 2rfa_A Transient receptor pote 99.6 2E-16 6.8E-21 182.6 9.5 102 1822-1923 86-225 (232)
50 3twr_A Tankyrase-2; ankyrin re 99.6 2.8E-16 9.6E-21 171.4 10.1 104 1808-1919 46-164 (165)
51 2etb_A Transient receptor pote 99.6 1.3E-16 4.4E-21 187.3 7.8 101 1822-1922 101-248 (256)
52 3d9h_A CDNA FLJ77766, highly s 99.6 6.5E-16 2.2E-20 184.8 13.8 107 1815-1921 91-216 (285)
53 2xai_A ASB-9, ankyrin repeat a 99.6 4.5E-16 1.5E-20 183.6 12.1 99 1822-1920 47-159 (261)
54 2gy5_A Angiopoietin-1 receptor 99.6 3E-16 1E-20 195.6 11.1 215 322-705 135-350 (423)
55 1ycs_B 53BP2, P53BP2; ankyrin 99.6 1.2E-16 4E-21 186.1 6.9 102 1822-1923 48-167 (239)
56 1ikn_D Protein (I-kappa-B-alph 99.6 2.4E-16 8.3E-21 182.6 9.6 109 1815-1923 77-212 (236)
57 1n11_A Ankyrin; clathrin, BAND 99.6 3.4E-16 1.2E-20 198.8 11.8 108 1815-1922 244-371 (437)
58 1bd8_A P19INK4D CDK4/6 inhibit 99.6 9.8E-16 3.4E-20 165.3 13.4 95 1822-1917 46-155 (156)
59 1s70_B 130 kDa myosin-binding 99.6 8.5E-16 2.9E-20 184.3 14.0 103 1822-1924 84-261 (299)
60 3aji_A 26S proteasome non-ATPa 99.6 1.5E-16 5.2E-21 183.3 7.0 99 1822-1920 117-230 (231)
61 1awc_B Protein (GA binding pro 99.6 2.4E-16 8.3E-21 169.8 7.9 99 1822-1921 13-126 (153)
62 1k1a_A B-cell lymphoma 3-encod 99.6 4.9E-16 1.7E-20 180.0 11.0 103 1822-1924 90-212 (241)
63 1awc_B Protein (GA binding pro 99.6 1.1E-15 3.7E-20 164.6 12.8 100 1808-1914 38-152 (153)
64 3f6q_A Integrin-linked protein 99.6 4.7E-16 1.6E-20 172.2 9.9 102 1822-1923 16-133 (179)
65 1yo8_A Thrombospondin-2; EGF, 99.6 5.7E-16 1.9E-20 198.7 11.3 140 264-412 2-177 (634)
66 3b7b_A Euchromatic histone-lys 99.6 1.3E-15 4.5E-20 176.1 13.1 103 1822-1924 88-206 (237)
67 1uzk_A Fibrillin-1; glycoprote 99.6 3.4E-17 1.2E-21 178.7 -0.3 136 301-467 1-156 (162)
68 1ihb_A P18-INK4C(INK6), cyclin 99.6 6E-16 2.1E-20 167.9 9.6 106 1808-1921 9-129 (162)
69 3hra_A Ankyrin repeat family p 99.6 5.5E-16 1.9E-20 174.5 9.5 97 1822-1918 83-201 (201)
70 1yo8_A Thrombospondin-2; EGF, 99.6 9.5E-16 3.3E-20 196.6 12.6 139 865-1013 1-177 (634)
71 3v30_A DNA-binding protein rfx 99.6 3.2E-16 1.1E-20 172.1 7.2 109 1808-1923 6-130 (172)
72 1n11_A Ankyrin; clathrin, BAND 99.6 4.7E-16 1.6E-20 197.4 9.2 108 1815-1922 211-338 (437)
73 1wdy_A 2-5A-dependent ribonucl 99.6 1.6E-15 5.3E-20 179.8 12.9 103 1822-1924 159-282 (285)
74 3d9h_A CDNA FLJ77766, highly s 99.6 1.4E-15 4.6E-20 182.0 12.2 108 1815-1924 124-251 (285)
75 4hbd_A KN motif and ankyrin re 99.6 1.5E-15 5.1E-20 180.8 11.7 97 1822-1918 161-273 (276)
76 2xai_A ASB-9, ankyrin repeat a 99.6 1.7E-15 5.9E-20 178.5 12.1 98 1822-1921 112-223 (261)
77 4g8k_A 2-5A-dependent ribonucl 99.6 1E-15 3.6E-20 187.3 10.6 100 1822-1921 179-299 (337)
78 3twr_A Tankyrase-2; ankyrin re 99.6 1.7E-15 5.9E-20 165.1 11.1 111 1808-1925 12-138 (165)
79 2fo1_E LIN-12 protein; beta-ba 99.6 6.4E-16 2.2E-20 192.3 8.5 108 1815-1922 124-265 (373)
80 3jxi_A Vanilloid receptor-rela 99.6 6.5E-16 2.2E-20 181.6 7.8 109 1808-1923 97-253 (260)
81 1k1a_A B-cell lymphoma 3-encod 99.6 2.6E-16 8.8E-21 182.3 3.9 98 1822-1919 127-240 (241)
82 3kea_A K1L; tropism, ANK repea 99.6 9.8E-16 3.4E-20 183.3 8.9 140 1777-1924 63-224 (285)
83 2vge_A RELA-associated inhibit 99.6 6.2E-16 2.1E-20 178.8 6.6 109 1808-1923 25-151 (229)
84 3b7b_A Euchromatic histone-lys 99.6 1.6E-15 5.4E-20 175.5 9.6 101 1822-1922 55-171 (237)
85 3utm_A Tankyrase-1; tankyrase, 99.6 7.3E-16 2.5E-20 188.8 6.6 83 1842-1924 209-309 (351)
86 1wdy_A 2-5A-dependent ribonucl 99.6 2E-15 7E-20 178.8 8.9 101 1822-1922 116-247 (285)
87 3hra_A Ankyrin repeat family p 99.6 3.5E-15 1.2E-19 167.9 10.3 109 1808-1923 43-173 (201)
88 3ehr_A Osteoclast-stimulating 99.6 1.6E-15 5.6E-20 174.0 7.7 110 1815-1924 72-202 (222)
89 2rfa_A Transient receptor pote 99.6 3.6E-15 1.2E-19 172.0 10.4 108 1815-1922 36-185 (232)
90 2gy5_A Angiopoietin-1 receptor 99.6 2.5E-15 8.6E-20 187.3 9.6 86 16-111 136-231 (423)
91 3utm_A Tankyrase-1; tankyrase, 99.6 5.7E-15 2E-19 180.8 12.5 91 1824-1918 227-332 (351)
92 3eu9_A Huntingtin-interacting 99.6 1.4E-15 4.9E-20 175.4 6.7 100 1822-1921 87-203 (240)
93 2fo1_E LIN-12 protein; beta-ba 99.6 4.6E-15 1.6E-19 184.6 10.8 98 1823-1920 250-371 (373)
94 2dzn_A Probable 26S proteasome 99.6 2.2E-15 7.6E-20 173.0 7.2 106 1808-1920 40-166 (228)
95 1uzk_A Fibrillin-1; glycoprote 99.6 3.5E-16 1.2E-20 170.7 0.3 55 283-338 97-156 (162)
96 3aaa_C Myotrophin, protein V-1 99.6 3.4E-15 1.1E-19 154.6 7.7 84 1822-1923 18-101 (123)
97 1ycs_B 53BP2, P53BP2; ankyrin 99.5 4.3E-15 1.5E-19 172.8 9.0 109 1808-1924 9-132 (239)
98 2bou_A EGF-like module contain 99.5 2.8E-15 9.4E-20 160.0 6.5 102 232-339 7-132 (143)
99 1bd8_A P19INK4D CDK4/6 inhibit 99.5 4.8E-15 1.7E-19 159.8 7.5 106 1808-1922 6-127 (156)
100 3jue_A Arfgap with coiled-coil 99.5 1.4E-14 4.7E-19 178.8 12.5 108 1808-1921 203-327 (368)
101 3lvq_E ARF-GAP with SH3 domain 99.5 1.1E-14 3.6E-19 188.3 11.8 109 1808-1923 136-268 (497)
102 2bou_A EGF-like module contain 99.5 5.1E-15 1.7E-19 158.0 6.9 102 271-377 7-132 (143)
103 4hbd_A KN motif and ankyrin re 99.5 3.2E-15 1.1E-19 177.9 5.9 112 1805-1923 111-245 (276)
104 3ljn_A Hypothetical protein; a 99.5 2.4E-15 8.2E-20 186.2 5.0 102 1822-1923 95-239 (364)
105 2w86_A Fibrillin-1, fibrillin1 99.5 5.4E-16 1.8E-20 166.3 -1.0 130 864-1017 1-141 (147)
106 1sw6_A Regulatory protein SWI6 99.5 5.3E-15 1.8E-19 180.5 7.7 104 1822-1925 142-313 (327)
107 1dcq_A PYK2-associated protein 99.5 1.5E-14 5.1E-19 172.3 11.1 101 1822-1922 141-265 (278)
108 3kea_A K1L; tropism, ANK repea 99.5 1.2E-14 3.9E-19 174.0 9.8 100 1822-1922 73-188 (285)
109 4aqs_A Laminin subunit beta-1; 99.5 3.4E-15 1.2E-19 193.3 5.5 249 1100-1428 268-524 (525)
110 3deo_A Signal recognition part 99.5 1.5E-14 5.1E-19 161.0 9.9 95 1822-1917 55-181 (183)
111 4g8k_A 2-5A-dependent ribonucl 99.5 2.9E-14 9.8E-19 174.5 12.7 108 1808-1922 29-152 (337)
112 1dx5_I Thrombomodulin; serine 99.5 5.4E-15 1.8E-19 152.0 4.4 104 865-978 2-111 (118)
113 2l6b_A NR1C; ankyrin, consensu 99.5 1.3E-14 4.6E-19 148.0 7.3 94 1813-1924 6-104 (115)
114 3ui2_A Signal recognition part 99.5 2E-14 6.8E-19 167.8 9.6 97 1822-1919 56-184 (244)
115 3c5r_A BARD-1, BRCA1-associate 99.5 2.4E-14 8.1E-19 151.1 9.3 90 1834-1924 1-105 (137)
116 3eu9_A Huntingtin-interacting 99.5 6.3E-14 2.2E-18 161.6 13.7 108 1808-1922 13-136 (240)
117 2b0o_E UPLC1; arfgap, structur 99.5 1.8E-14 6.1E-19 173.6 9.1 106 1808-1920 155-284 (301)
118 3k6s_B Integrin beta-2; cell r 99.5 2.1E-14 7.2E-19 186.4 9.6 148 230-395 433-607 (687)
119 1s70_B 130 kDa myosin-binding 99.5 2E-14 6.8E-19 172.4 8.7 108 1808-1922 44-226 (299)
120 3k6s_B Integrin beta-2; cell r 99.5 2.2E-14 7.4E-19 186.3 8.4 93 1344-1446 505-607 (687)
121 1d9s_A Cyclin-dependent kinase 99.5 3.3E-14 1.1E-18 149.9 7.8 90 1834-1923 2-106 (136)
122 2w86_A Fibrillin-1, fibrillin1 99.5 2.9E-15 9.8E-20 160.6 -0.5 128 183-338 1-141 (147)
123 2etb_A Transient receptor pote 99.5 2.5E-14 8.4E-19 167.8 7.4 99 1825-1923 20-167 (256)
124 1tpg_A T-plasminogen activator 99.5 2E-14 6.9E-19 140.2 5.5 87 1337-1433 1-90 (91)
125 3jxi_A Vanilloid receptor-rela 99.5 1E-14 3.5E-19 171.4 3.9 100 1822-1921 60-211 (260)
126 1tpg_A T-plasminogen activator 99.5 2.4E-14 8.3E-19 139.6 5.4 87 927-1024 1-90 (91)
127 4aqs_A Laminin subunit beta-1; 99.5 1.7E-14 5.8E-19 186.8 5.5 250 1135-1465 265-524 (525)
128 2pnn_A Transient receptor pote 99.5 3.9E-14 1.3E-18 167.9 7.9 113 1805-1921 54-219 (273)
129 1dx5_I Thrombomodulin; serine 99.4 2.8E-14 9.7E-19 146.6 3.0 100 1316-1425 3-111 (118)
130 3t8k_A Uncharacterized protein 99.4 2.1E-14 7.2E-19 160.4 0.8 108 1808-1924 10-150 (186)
131 2zgd_A 3 repeat synthetic anky 99.4 3.3E-13 1.1E-17 136.9 9.2 82 1808-1914 28-109 (110)
132 3aaa_C Myotrophin, protein V-1 99.4 3.9E-13 1.3E-17 138.9 6.7 64 1841-1922 4-67 (123)
133 2vge_A RELA-associated inhibit 99.4 1.5E-12 5.1E-17 150.4 11.9 99 1827-1925 1-117 (229)
134 1bi7_B P16INK4A, MTS1, multipl 99.3 5.7E-13 2E-17 143.9 6.0 86 1837-1922 5-105 (156)
135 2jab_A H10-2-G3; HER2, darpin, 99.3 8.7E-13 3E-17 139.0 5.7 83 1841-1923 11-108 (136)
136 1n0r_A 4ANK, 4 ankyrin repeats 99.3 2.3E-12 7.8E-17 132.8 7.2 81 1843-1923 1-96 (126)
137 1sw6_A Regulatory protein SWI6 99.3 9.6E-13 3.3E-17 160.6 4.8 97 1822-1918 108-228 (327)
138 2aja_A Ankyrin repeat family p 99.3 2.6E-13 8.8E-18 168.1 -1.3 105 1808-1919 96-223 (376)
139 3ehr_A Osteoclast-stimulating 99.3 1.7E-12 5.8E-17 148.8 4.2 86 1838-1923 67-168 (222)
140 2b0o_E UPLC1; arfgap, structur 99.2 2.4E-12 8.3E-17 155.0 4.8 94 1805-1908 190-299 (301)
141 3deo_A Signal recognition part 99.2 1.3E-12 4.3E-17 145.3 1.6 82 1841-1923 41-138 (183)
142 1aut_L Activated protein C; se 99.2 2.3E-11 7.9E-16 124.1 7.0 96 264-361 5-110 (114)
143 1emn_A Fibrillin; extracellula 99.1 3.4E-11 1.2E-15 115.1 6.2 70 627-701 3-76 (82)
144 3ui2_A Signal recognition part 99.1 8E-11 2.7E-15 137.2 8.2 81 1842-1923 43-139 (244)
145 1emn_A Fibrillin; extracellula 99.1 9.2E-11 3.1E-15 112.1 6.8 60 72-133 2-65 (82)
146 3lvq_E ARF-GAP with SH3 domain 99.1 2.1E-10 7.1E-15 148.1 12.4 86 1805-1894 171-272 (497)
147 1aut_L Activated protein C; se 99.1 5.8E-11 2E-15 121.1 5.6 91 1353-1449 4-110 (114)
148 1lmj_A Fibrillin 1; EGF, calci 99.1 3.3E-11 1.1E-15 116.4 3.3 70 302-374 2-78 (86)
149 1lmj_A Fibrillin 1; EGF, calci 99.1 5.8E-11 2E-15 114.7 5.0 69 628-701 2-79 (86)
150 1n0q_A 3ANK, 3 ankyrin repeats 99.1 6.3E-11 2.2E-15 115.9 4.9 63 1843-1923 1-63 (93)
151 2c4f_L Coagulation factor VII 99.1 6.4E-11 2.2E-15 125.8 5.3 76 1354-1429 46-129 (142)
152 1z6c_A Vitamin K-dependent pro 99.1 7.4E-11 2.5E-15 114.1 4.5 76 342-424 2-83 (87)
153 1z6c_A Vitamin K-dependent pro 99.1 4.9E-11 1.7E-15 115.4 3.2 76 1354-1434 2-83 (87)
154 2c4f_L Coagulation factor VII 99.0 1.3E-10 4.5E-15 123.4 6.0 85 943-1029 45-139 (142)
155 1nfu_B Coagulation factor XA, 99.0 4.2E-11 1.4E-15 132.5 2.1 84 627-714 40-132 (195)
156 1nfu_B Coagulation factor XA, 99.0 6.4E-11 2.2E-15 131.0 2.9 86 263-354 40-130 (195)
157 1x7a_L Coagulation factor IX, 99.0 1.6E-10 5.3E-15 123.1 5.4 74 627-705 46-126 (146)
158 1x7a_L Coagulation factor IX, 99.0 1.9E-10 6.5E-15 122.5 5.0 74 264-340 47-125 (146)
159 3jue_A Arfgap with coiled-coil 99.0 1.8E-10 6.1E-15 142.1 5.3 84 1840-1923 195-296 (368)
160 2vh0_B Activated factor XA lig 99.0 1.3E-10 4.6E-15 121.9 2.1 74 628-705 41-121 (134)
161 1dcq_A PYK2-associated protein 99.0 8E-10 2.7E-14 131.4 9.1 81 1805-1889 169-265 (278)
162 2vh0_B Activated factor XA lig 98.9 2E-10 6.9E-15 120.6 3.1 75 264-340 41-120 (134)
163 2aja_A Ankyrin repeat family p 98.9 1.1E-10 3.8E-15 144.4 -1.0 93 1822-1922 77-190 (376)
164 2zgd_A 3 repeat synthetic anky 98.9 4E-10 1.4E-14 114.1 2.9 69 1837-1923 17-85 (110)
165 2w2n_E LDL receptor, low-densi 98.9 4E-10 1.4E-14 113.2 2.8 77 291-374 19-99 (107)
166 2l6b_A NR1C; ankyrin, consensu 98.9 7.2E-10 2.4E-14 112.7 4.3 67 1839-1923 4-70 (115)
167 3u7u_G Neuregulin 1; signaling 98.8 1.1E-09 3.9E-14 94.8 3.7 47 860-906 1-52 (55)
168 1klo_A Laminin; glycoprotein; 98.8 2.2E-09 7.4E-14 116.4 6.4 29 1097-1125 2-33 (162)
169 2w2n_E LDL receptor, low-densi 98.8 1.2E-09 3.9E-14 109.8 3.1 78 932-1016 18-100 (107)
170 1klo_A Laminin; glycoprotein; 98.8 2.8E-09 9.6E-14 115.5 6.1 64 1110-1201 74-145 (162)
171 3m0c_C LDL receptor, low-densi 98.8 3.3E-09 1.1E-13 142.7 7.7 205 154-381 162-393 (791)
172 1n7d_A LDL receptor, low-densi 98.8 3.3E-08 1.1E-12 132.5 17.2 165 1248-1425 182-365 (699)
173 3u7u_G Neuregulin 1; signaling 98.8 4.3E-09 1.5E-13 91.1 4.2 47 428-474 2-53 (55)
174 3m0c_C LDL receptor, low-densi 98.7 6.4E-09 2.2E-13 139.9 7.6 120 212-337 257-383 (791)
175 3h5c_B Vitamin K-dependent pro 98.7 4.9E-09 1.7E-13 127.1 5.8 71 627-701 3-76 (317)
176 1n7d_A LDL receptor, low-densi 98.7 3.9E-08 1.4E-12 131.7 14.8 165 233-415 182-365 (699)
177 3h5c_B Vitamin K-dependent pro 98.7 1.6E-08 5.6E-13 122.5 6.8 71 1353-1425 3-76 (317)
178 2p28_B Integrin beta-2; hybrid 98.6 1.2E-08 4.1E-13 115.1 4.4 62 1360-1429 142-214 (217)
179 3i08_A Neurogenic locus notch 98.6 9.1E-09 3.1E-13 112.2 2.6 72 1490-1564 5-80 (220)
180 2p28_B Integrin beta-2; hybrid 98.6 2E-08 6.7E-13 113.4 5.3 94 1058-1163 96-213 (217)
181 2oo4_A Notch 2, neurogenic loc 98.5 8E-09 2.7E-13 116.2 -1.1 60 1463-1525 58-117 (234)
182 3eto_A Neurogenic locus notch 98.5 2.8E-08 9.5E-13 111.1 1.8 71 1490-1563 5-79 (242)
183 1edm_B Factor IX; epidermal gr 98.5 1.1E-07 3.6E-12 77.0 4.6 38 865-902 1-38 (39)
184 1edm_B Factor IX; epidermal gr 98.4 1.5E-07 5.3E-12 76.0 4.7 37 433-469 2-38 (39)
185 1egf_A Epidermal growth factor 98.2 1E-06 3.5E-11 76.3 4.8 43 433-475 2-49 (53)
186 1egf_A Epidermal growth factor 98.2 1.2E-06 4.1E-11 75.9 5.0 41 866-906 2-47 (53)
187 1a3p_A Epidermal growth factor 98.2 9.2E-07 3.2E-11 73.8 3.9 39 436-474 2-45 (45)
188 2wg3_C Hedgehog-interacting pr 98.2 2.3E-07 7.9E-12 117.5 -0.2 79 612-705 377-455 (463)
189 1hae_A Heregulin-alpha; growth 98.1 8.8E-07 3E-11 79.8 2.5 45 435-479 7-56 (63)
190 3ca7_A Protein spitz; argos, E 98.1 4.2E-07 1.4E-11 78.4 0.3 44 612-667 3-49 (52)
191 3v65_B Low-density lipoprotein 98.1 5.2E-07 1.8E-11 112.4 1.1 73 302-379 2-83 (386)
192 3p5b_L Low density lipoprotein 98.1 1.7E-06 6E-11 108.1 5.4 67 630-701 1-71 (400)
193 3p5b_L Low density lipoprotein 98.1 1.3E-06 4.5E-11 109.2 3.9 66 267-336 2-70 (400)
194 3v65_B Low-density lipoprotein 98.0 7.2E-07 2.5E-11 111.1 0.9 72 1354-1428 2-82 (386)
195 2wg3_C Hedgehog-interacting pr 98.0 6.3E-07 2.2E-11 113.5 0.2 79 19-111 377-455 (463)
196 1a3p_A Epidermal growth factor 98.0 2.4E-06 8.2E-11 71.3 3.7 38 869-906 2-44 (45)
197 1k36_A Epiregulin; EGF-like fo 98.0 2.9E-06 9.9E-11 70.9 3.8 39 865-904 1-44 (46)
198 1hae_A Heregulin-alpha; growth 98.0 1.8E-06 6.2E-11 77.7 2.7 44 867-910 6-54 (63)
199 2k2s_B Micronemal protein 6; m 98.0 1.2E-06 4.2E-11 77.5 1.4 47 1654-1700 6-56 (61)
200 2k2s_B Micronemal protein 6; m 98.0 1.3E-06 4.3E-11 77.5 1.1 40 519-560 9-51 (61)
201 1k36_A Epiregulin; EGF-like fo 98.0 4.1E-06 1.4E-10 70.0 4.0 38 433-471 2-44 (46)
202 3zyj_B Netrin-G1; cell adhesio 97.9 2.2E-06 7.4E-11 104.7 2.5 109 603-721 304-413 (426)
203 3ca7_A Protein spitz; argos, E 97.9 1.5E-06 5E-11 75.0 0.1 43 19-74 3-48 (52)
204 3zyj_B Netrin-G1; cell adhesio 97.8 6.7E-06 2.3E-10 100.4 3.9 61 1375-1450 351-412 (426)
205 1nql_B Epidermal growth factor 97.4 5E-05 1.7E-09 65.5 2.6 35 439-473 11-47 (53)
206 1nql_B Epidermal growth factor 97.3 6.9E-05 2.4E-09 64.6 2.0 32 674-705 11-44 (53)
207 2fd6_A Urokinase-type plasmino 97.1 0.00032 1.1E-08 71.8 4.6 58 874-942 2-62 (122)
208 2fd6_A Urokinase-type plasmino 97.0 0.0004 1.4E-08 71.1 4.8 59 1362-1429 2-63 (122)
209 2kl7_A Fibulin-4; secreted, ca 96.6 0.0011 3.7E-08 60.9 3.4 37 301-337 1-38 (71)
210 1apq_A Complement protease C1R 96.6 0.0011 3.7E-08 57.2 3.2 34 1657-1692 2-45 (53)
211 3ltf_D Protein spitz; receptor 96.6 0.00064 2.2E-08 59.7 1.7 30 636-665 15-47 (58)
212 1g1s_A P-selectin; selectin, l 96.5 0.00084 2.9E-08 72.5 2.8 42 435-477 120-161 (162)
213 1apq_A Complement protease C1R 96.5 0.0015 5.2E-08 56.2 3.6 25 440-466 20-44 (53)
214 3ltf_D Protein spitz; receptor 96.5 0.00085 2.9E-08 58.9 1.9 31 441-471 15-49 (58)
215 1g1s_A P-selectin; selectin, l 96.4 0.00087 3E-08 72.3 1.9 41 669-709 119-159 (162)
216 2jkh_L Factor X light chain; p 96.2 0.0021 7.1E-08 55.9 2.6 41 304-347 2-46 (55)
217 2kl7_A Fibulin-4; secreted, ca 96.0 0.0031 1.1E-07 57.9 3.0 34 433-466 2-38 (71)
218 1q4g_A Prostaglandin G/H synth 95.9 0.0029 1E-07 81.2 3.3 37 669-705 2-40 (553)
219 1q4g_A Prostaglandin G/H synth 95.9 0.0027 9.1E-08 81.5 2.8 38 867-904 2-41 (553)
220 3nt1_A Prostaglandin-endoperox 95.9 0.0038 1.3E-07 80.1 3.9 37 669-705 1-39 (587)
221 1kli_L Factor VIIA; extrinsic 95.7 0.005 1.7E-07 56.1 3.0 43 301-346 3-50 (69)
222 2i9a_A Urokinase-type plasmino 95.7 0.0077 2.6E-07 63.4 4.7 60 636-705 14-75 (145)
223 3nt1_A Prostaglandin-endoperox 95.6 0.0044 1.5E-07 79.5 3.3 37 629-665 1-38 (587)
224 1gl4_A Nidogen-1, entactin; im 95.6 0.0024 8.3E-08 73.8 0.8 37 301-337 3-39 (285)
225 1ob1_C Major merozoite surface 95.5 0.0085 2.9E-07 57.5 3.8 68 268-335 7-83 (99)
226 2i9a_A Urokinase-type plasmino 95.4 0.011 3.8E-07 62.2 4.8 58 1362-1428 14-74 (145)
227 1gl4_A Nidogen-1, entactin; im 95.0 0.0058 2E-07 70.6 1.3 35 1657-1691 3-39 (285)
228 3e50_C Protransforming growth 94.8 0.017 5.9E-07 48.7 3.3 35 42-77 13-48 (50)
229 1g1t_A E-selectin; EGF, adhesi 94.8 0.0097 3.3E-07 63.6 2.3 38 435-472 120-157 (157)
230 2jkh_L Factor X light chain; p 94.7 0.0091 3.1E-07 51.9 1.5 39 344-384 2-46 (55)
231 2rnl_A Amphiregulin; AR, color 94.2 0.054 1.8E-06 45.8 4.9 32 42-74 17-49 (50)
232 1kli_L Factor VIIA; extrinsic 94.0 0.018 6.3E-07 52.4 1.9 42 341-384 3-51 (69)
233 4aqt_A Laminin subunit gamma-1 94.0 0.03 1E-06 68.1 4.3 22 539-560 267-288 (375)
234 1iox_A Betacellulin; EGF-like 94.0 0.021 7.3E-07 48.3 2.1 33 42-75 13-46 (50)
235 1g1t_A E-selectin; EGF, adhesi 93.9 0.017 6E-07 61.6 1.7 37 868-904 120-156 (157)
236 4aqt_A Laminin subunit gamma-1 93.8 0.031 1.1E-06 68.0 3.8 30 1107-1136 268-297 (375)
237 1xdt_R Hbegf, heparin-binding 93.7 0.023 8E-07 52.4 2.0 36 38-74 38-77 (79)
238 1n1i_A Merozoite surface prote 93.4 0.085 2.9E-06 51.0 5.2 66 268-334 13-83 (105)
239 1kig_L Factor XA; glycoprotein 92.9 0.028 9.6E-07 47.9 1.1 18 318-335 11-28 (51)
240 1ob1_C Major merozoite surface 92.8 0.099 3.4E-06 50.3 4.8 67 229-295 7-83 (99)
241 1xdt_R Hbegf, heparin-binding 92.6 0.04 1.4E-06 50.9 1.8 35 867-902 37-76 (79)
242 1iox_A Betacellulin; EGF-like 92.6 0.053 1.8E-06 45.9 2.3 32 439-471 13-46 (50)
243 1n1i_A Merozoite surface prote 92.3 0.17 5.8E-06 48.9 5.6 67 312-379 17-95 (105)
244 3cfw_A L-selectin; EGF, cell a 92.2 0.083 2.9E-06 56.7 4.1 38 437-475 122-159 (164)
245 2rnl_A Amphiregulin; AR, color 92.2 0.097 3.3E-06 44.2 3.4 30 675-705 18-49 (50)
246 2bz6_L Blood coagulation facto 92.1 0.066 2.3E-06 46.0 2.4 34 310-346 6-44 (53)
247 1szb_A Mannose binding lectin- 91.9 0.05 1.7E-06 59.0 1.8 41 934-976 113-157 (170)
248 3cfw_A L-selectin; EGF, cell a 91.8 0.072 2.5E-06 57.2 2.9 35 671-705 121-155 (164)
249 1szb_A Mannose binding lectin- 91.5 0.051 1.7E-06 58.9 1.3 43 292-336 113-158 (170)
250 3e50_C Protransforming growth 91.3 0.12 4.1E-06 43.6 3.1 31 911-942 14-44 (50)
251 3asi_A Neurexin-1-alpha; beta- 91.3 0.12 4E-06 64.5 4.5 39 433-471 184-223 (410)
252 3asi_A Neurexin-1-alpha; beta- 91.0 0.14 4.8E-06 63.7 4.8 43 862-904 180-223 (410)
253 1kig_L Factor XA; glycoprotein 90.2 0.085 2.9E-06 44.9 1.2 28 356-383 11-42 (51)
254 2ygo_A WIF-1, WNT inhibitory f 89.7 0.17 5.8E-06 54.6 3.3 38 30-75 144-181 (188)
255 2y38_A Laminin subunit alpha-5 89.2 0.51 1.7E-05 57.7 7.4 15 1300-1314 286-300 (403)
256 2y38_A Laminin subunit alpha-5 89.1 0.51 1.7E-05 57.6 7.3 15 1111-1125 286-300 (403)
257 2bz6_L Blood coagulation facto 88.1 0.15 5.1E-06 43.8 1.2 29 355-383 11-44 (53)
258 3qcw_A Neurexin-1-alpha; synap 87.6 0.29 1E-05 69.6 4.4 45 430-474 1013-1058(1245)
259 3qcw_A Neurexin-1-alpha; synap 86.9 0.34 1.2E-05 68.9 4.5 44 862-905 1012-1056(1245)
260 2ygo_A WIF-1, WNT inhibitory f 86.7 0.32 1.1E-05 52.5 3.1 32 631-667 150-181 (188)
261 1nzi_A Complement C1S componen 84.8 0.34 1.2E-05 51.6 2.2 42 934-977 106-149 (159)
262 2wph_E Coagulation factor IXA 75.1 1.5 5.1E-05 38.5 2.5 24 310-335 6-30 (59)
263 1nzi_A Complement C1S componen 74.7 0.94 3.2E-05 48.1 1.5 43 292-336 106-149 (159)
264 2wph_E Coagulation factor IXA 72.2 1.6 5.5E-05 38.2 2.1 27 355-381 11-42 (59)
265 2p26_A Integrin beta-2; hybrid 70.5 2.4 8.2E-05 49.3 3.7 53 954-1014 198-263 (280)
266 2p26_A Integrin beta-2; hybrid 69.0 1.9 6.4E-05 50.2 2.3 48 21-73 209-274 (280)
267 2e26_A Reelin, reeler protein; 57.3 1.8 6.1E-05 56.1 -0.9 46 61-111 520-565 (725)
268 3f1s_B Vitamin K-dependent pro 56.9 3.7 0.00013 48.0 1.9 33 302-336 1-34 (283)
269 3v64_C Agrin; beta propeller, 56.8 3.3 0.00011 50.0 1.5 30 303-335 1-30 (349)
270 3v64_C Agrin; beta propeller, 52.6 4.4 0.00015 48.9 1.5 30 945-976 1-30 (349)
271 2e26_A Reelin, reeler protein; 50.9 4.5 0.00015 52.5 1.3 45 970-1020 521-565 (725)
272 3t5o_A Complement component C6 44.5 22 0.00074 48.7 6.5 47 630-680 498-544 (913)
273 3t5o_A Complement component C6 43.2 17 0.00058 49.7 5.2 45 867-913 497-541 (913)
274 3f1s_B Vitamin K-dependent pro 41.6 11 0.00037 43.9 2.6 39 343-383 2-47 (283)
275 1b9w_A Protein (merozoite surf 41.4 43 0.0015 31.7 5.9 67 632-698 7-78 (95)
276 1b9w_A Protein (merozoite surf 41.3 35 0.0012 32.3 5.3 67 268-334 7-78 (95)
277 3fby_A COMP, cartilage oligome 30.6 32 0.0011 43.2 4.1 40 434-473 18-63 (551)
278 2jwa_A Receptor tyrosine-prote 23.3 1E+02 0.0036 25.2 4.5 23 1749-1771 17-39 (44)
279 2lbc_A Ubiquitin carboxyl-term 23.3 45 0.0015 33.8 3.1 41 1874-1919 78-118 (126)
No 1
>3eto_A Neurogenic locus notch homolog protein 1; alpha-beta sandwich, HD domain, LNR repeat, calcium-binding, domain, autoinhibition, activator, T-all; 2.00A {Homo sapiens} PDB: 3l95_X* 3i08_B 1pb5_A
Probab=100.00 E-value=4.1e-43 Score=389.02 Aligned_cols=222 Identities=42% Similarity=0.951 Sum_probs=202.2
Q ss_pred CCCCCccCcccCCccCccCCCCCCCCC-CCCccCCCCcccccccCCCcccCCCCCcccccccccccccccccCccccccc
Q psy6358 1458 KAGNHRCDDECNTIACHFDGNDCSLGI-NPWINCTANINCWEVFMNGRCDEVCNNPQCLFDGRDCEKNLQPCNPIYDAYC 1536 (1945)
Q Consensus 1458 ~~~~~~c~~~C~~~~c~~~g~~C~~~~-~~~~~C~~~~~C~~~~~~~~C~~~c~~~~C~~dg~~c~~~~~~c~~~~~~~C 1536 (1945)
+.++++|+.+||+.+|+|||+||++.+ +||.+|+...+||+.+++++||++||+++|+|||+||......|+++|+.||
T Consensus 13 ~~gdg~CD~eCN~~~C~~DGgDC~~~~~~pw~~C~~~~~C~~~~~dg~CD~eCN~~~C~~DGgDC~~~~~~C~~~~~~~C 92 (242)
T 3eto_A 13 DAGNKVCSLQCNNHACGWDGGDCSLNFNDPWKNCTQSLQCWKYFSDGHCDSQCNSAGCLFDGFDCQRAEGQCNPLYDQYC 92 (242)
T ss_dssp HTTSSSCCGGGCSGGGHHHHTTTTTTCSCTTTTSCGGGCGGGTTTSSSCCGGGCSGGGGGGGGTTSCCCCSSCTTTHHHH
T ss_pred ccCCCccCCccCcccccCCCCccccccCCCCCCCCCccchHHHhCCCccCcccCccccCccCCcccCCCCCCCchhhHHH
Confidence 367899999999999999999999886 5999999888999999999999999999999999999988889999999999
Q ss_pred ccCCCCCcCCCCCCCCCCCcCCCCCCC-CCCCCCCCceEEEEEcChhhhhcccccceeccccceeeeEEEecCCCCCccc
Q psy6358 1537 QKHYANGHCDYSCNNAECNWDGLDCER-EPPSLADGAISIIVLMDMQMFKQNKVSFLRELGHELRATVRIKQEPTGHEMI 1615 (1945)
Q Consensus 1537 ~~~~~~~~c~~~C~~~~c~~~G~~C~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1615 (1945)
+++|++|+||++||+++|+|||+||.. .++.+++|+|+|+|+|+|++|+++...|||.||++|||+|+|++|+.|++||
T Consensus 93 ~~~f~dG~CD~~CN~~~C~~DG~DC~~~~~~~~~~g~lvivv~~~p~~~~~~~~~fLr~ls~~Lrt~v~i~~D~~g~~mi 172 (242)
T 3eto_A 93 KDHFSDGHCDQGCNSAECEWDGLDCAEHVPERLAAGTLVVVVLMPPEQLRNSSFHFLRELSRVLHTNVVFKRDAHGQQMI 172 (242)
T ss_dssp HHHTTSSSCCGGGCSGGGGGGGGTTCTTSCCCBCBSEEEEEESSCHHHHHHTHHHHHHHHHHHHTSEEEECBCTTSCBCE
T ss_pred HHHhcCCcCccccCccccCccCCccccccchhhcCCcEEEEEccCHHHHHHHHHHHHHHHHHHheeeEEEEEcCCCCeEE
Confidence 999999999999999999999999998 5788999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccccCCcceeecCCCcccCccccccCCCccceEEeccCCCccCCCCCCCCeeeccCCceEEeCCCCCcCCCCCC
Q psy6358 1616 YQHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDKVGGFECRCPPGFVGSRWTD 1695 (1945)
Q Consensus 1616 ~~~~~~c~~~~~~~~c~c~~g~~g~~~~~~~~~~~~~~~~eid~~~C~~~~c~~~~~C~~~~g~~~c~c~~g~~g~~~~~ 1695 (1945)
|||.+ ...+| ++|+||||++.|.+ .+
T Consensus 173 ~p~~g--------------~~~~G-----------s~v~LeiDnr~C~~-----------------------------~~ 198 (242)
T 3eto_A 173 FPYYG--------------MDVRG-----------SIVYLEIDNRQCVQ-----------------------------AS 198 (242)
T ss_dssp EEEEC--------------SSCEE-----------EEEEEEEECTTHHH-----------------------------HC
T ss_pred eecCC--------------CCCcc-----------eEEEEEeeCCcccC-----------------------------CC
Confidence 99987 12344 88999999999965 35
Q ss_pred cccccChHHHHHHHHHHhhcccccccCCceeeeeeccCCCC
Q psy6358 1696 AECFSNANEAADFLAASAAAHALSTTFPIYRVRGVSSAEYP 1736 (1945)
Q Consensus 1696 ~~C~~s~~~aA~~L~A~~~~~~L~~~~Pi~~i~~v~~~~~~ 1736 (1945)
++||+++++||+||+|+++++.|+ +| |||++|++++.+
T Consensus 199 ~~CF~~a~~aA~fL~A~~~~~~l~--~p-~pi~~v~~e~~~ 236 (242)
T 3eto_A 199 SQCFQSATDVAAFLGALASLGSLN--IP-YKIEAVQSETVE 236 (242)
T ss_dssp SCCCSBHHHHHHHHHHHHHHTCCC--SS-SCEEEEEEECC-
T ss_pred CccccCHHHHHHHHHHHHhcccCC--CC-CcceeeeccccC
Confidence 689999999999999999999998 44 555666665444
No 2
>2oo4_A Notch 2, neurogenic locus notch homolog protein 2, HN2, notch2, NOTC2; alpha-beta-sandwich, SEA domain, LNR, LIN12 notch repeat, CY rich, HD domain; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.2e-39 Score=360.44 Aligned_cols=216 Identities=42% Similarity=0.934 Sum_probs=196.1
Q ss_pred CCCCCccCcccCCccCccCCCCCCCCC-CCCccCCCCcccccccCCCcccCCCCCcccccccccccccccccCccccccc
Q psy6358 1458 KAGNHRCDDECNTIACHFDGNDCSLGI-NPWINCTANINCWEVFMNGRCDEVCNNPQCLFDGRDCEKNLQPCNPIYDAYC 1536 (1945)
Q Consensus 1458 ~~~~~~c~~~C~~~~c~~~g~~C~~~~-~~~~~C~~~~~C~~~~~~~~C~~~c~~~~C~~dg~~c~~~~~~c~~~~~~~C 1536 (1945)
+.++++|+.+||+.+|+|||++|+... +||.+|+....||+.|++ +|+++||+++|+|||+||......|. |..||
T Consensus 12 ~~gdg~CD~eCN~~~C~~DGGDC~~~~~~p~~~C~~~~~C~~~~~~-~Cd~~Cn~~~C~~DG~DC~~~~~~C~--~~~~C 88 (234)
T 2oo4_A 12 KARDGVCDEACNSHACQWDGGDCSLTMENPWANCSSPLPCWDYINN-QCDELCNTVECLFDNFECQGNSKTCK--YDKYC 88 (234)
T ss_dssp HTTSSSCCGGGCSTTTHHHHTTTTTTCSCTTTTCCCSSCGGGCCSS-SCCGGGCSTTTTHHHHTSCSSCCCCT--THHHH
T ss_pred cCCCCccCCCcCCcccCCCCCcccCCcCCccccCCcccccchhccc-cCCcccCchhhccCCcccccccccCC--CCcch
Confidence 356889999999999999999999976 599999998899999999 99999999999999999998888886 89999
Q ss_pred ccCCCCCcCCCCCCCCCCCcCCCCCCC-CCCCCCCCceEEEEEcChhhhhcccccceeccccceeeeEEEecCCCCCccc
Q psy6358 1537 QKHYANGHCDYSCNNAECNWDGLDCER-EPPSLADGAISIIVLMDMQMFKQNKVSFLRELGHELRATVRIKQEPTGHEMI 1615 (1945)
Q Consensus 1537 ~~~~~~~~c~~~C~~~~c~~~G~~C~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1615 (1945)
+++|++|+||++||+++|||||+||.. .|+.+++|+|+|+|+++|++|+++...|||.||++||+.|||++|+.|++||
T Consensus 89 ~~~~~dG~CD~~CNn~eCg~DGgDC~~~~~~~~~~g~l~~~v~~~p~~~~~~~~~flr~ls~~L~t~vr~~~d~~g~~mi 168 (234)
T 2oo4_A 89 ADHFKDNHCNQGCNSEECGWDGLDCAADQPENLAEGTLVIVVLMPPEQLLQDARSFLRALGTLLHTNLRIKRDSQGELMV 168 (234)
T ss_dssp HHHTTSSSCCGGGCSGGGGGGGGTTCTTSCCCBCBSEEEEEESSCHHHHHHTHHHHHHHHHHHHTSEEEECBCTTSCBCE
T ss_pred hhhcCCCCcCcccCccccCCcCCcccCCchhhhccCcEEEEEecCHHHHHHHHHHHHHHHHHHhccceEEEEcCCCCeee
Confidence 999999999999999999999999988 5888999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccccCCcceeecCCCcccCccccccCCCccceEEeccCCCccCCCCCCCCeeeccCCceEEeCCCCCcCCCCCC
Q psy6358 1616 YQHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDKVGGFECRCPPGFVGSRWTD 1695 (1945)
Q Consensus 1616 ~~~~~~c~~~~~~~~c~c~~g~~g~~~~~~~~~~~~~~~~eid~~~C~~~~c~~~~~C~~~~g~~~c~c~~g~~g~~~~~ 1695 (1945)
|||.+ ..+| ++|+||||++.|.+ .+
T Consensus 169 ~p~~~---------------~~~G-----------~~v~Leidnr~C~~-----------------------------~~ 193 (234)
T 2oo4_A 169 YPYYG---------------EVAG-----------SKVFLEIDNRQCVQ-----------------------------DS 193 (234)
T ss_dssp EEEES---------------SSEE-----------EEEEEEEECTTHHH-----------------------------HC
T ss_pred ecccC---------------CCcc-----------eEEEEEEecccccc-----------------------------cc
Confidence 99976 1234 78999999999975 25
Q ss_pred cccccChHHHHHHHHHHhhcccccccCCceeeeeeccCCCC
Q psy6358 1696 AECFSNANEAADFLAASAAAHALSTTFPIYRVRGVSSAEYP 1736 (1945)
Q Consensus 1696 ~~C~~s~~~aA~~L~A~~~~~~L~~~~Pi~~i~~v~~~~~~ 1736 (1945)
++||+++++||+||+|+++++.|. +||+ +|++++.+
T Consensus 194 ~~Cf~~a~~aa~~l~A~~~~~~l~--~p~~---~v~~~~~~ 229 (234)
T 2oo4_A 194 DHCFKNTDAAAALLASHAIQGTLS--YPLV---SVVSESLT 229 (234)
T ss_dssp SCCCSBHHHHHHHHHHHHHHTCCS--SCEE---EEEEESCC
T ss_pred cccccCHHHHHHHHHHHHhccCCC--CCeE---EeecCCCC
Confidence 789999999999999999999986 6644 55555444
No 3
>3i08_A Neurogenic locus notch homolog protein 1; SEA domain, LIN-12 notch repeat, LNR, heterodimerization domain, HD, activator, ANK repeat, calcium; 3.20A {Homo sapiens}
Probab=100.00 E-value=4.1e-34 Score=309.32 Aligned_cols=166 Identities=46% Similarity=1.059 Sum_probs=156.8
Q ss_pred CCCCCccCcccCCccCccCCCCCCCCC-CCCccCCCCcccccccCCCcccCCCCCcccccccccccccccccCccccccc
Q psy6358 1458 KAGNHRCDDECNTIACHFDGNDCSLGI-NPWINCTANINCWEVFMNGRCDEVCNNPQCLFDGRDCEKNLQPCNPIYDAYC 1536 (1945)
Q Consensus 1458 ~~~~~~c~~~C~~~~c~~~g~~C~~~~-~~~~~C~~~~~C~~~~~~~~C~~~c~~~~C~~dg~~c~~~~~~c~~~~~~~C 1536 (1945)
+.++++|+.+||+.+|+|||+||++.+ +||.+|+...+||+.|+++.||+.||+++|+|||+||......|+++|+.||
T Consensus 13 ~~gdg~CD~eCN~~~C~~DGgDCs~~~~~Pw~~C~~~~~C~~~~~dg~CD~~CN~~~C~~DGgDC~~~~~~C~~~~~~yC 92 (220)
T 3i08_A 13 DAGNKVCSLQCNNHACGWDGGDCSLNFNDPWKNCTQSLQCWKYFSDGHCDSQCNSAGCLFDGFDCQRAEGQCNPLYDQYC 92 (220)
T ss_dssp HTTSSSCCGGGCSGGGHHHHTTTTTTCCCTTTTSCGGGCGGGTTTSSSCCGGGCSGGGGGGGGTTCTTCCSCCHHHHHHH
T ss_pred ccCCCccCcccCCccccCCCCcccccCCCCccCCCchhHHHHHcCCCcCCcccCccccCccCCCcCCCcCCCCchhhhHH
Confidence 357899999999999999999999886 5999999888999999999999999999999999999998899999999999
Q ss_pred ccCCCCCcCCCCCCCCCCCcCCCCCCC-CCCCCCCCceEEEEEcChhhhhcccccceeccccceeeeEEEecCCCCCccc
Q psy6358 1537 QKHYANGHCDYSCNNAECNWDGLDCER-EPPSLADGAISIIVLMDMQMFKQNKVSFLRELGHELRATVRIKQEPTGHEMI 1615 (1945)
Q Consensus 1537 ~~~~~~~~c~~~C~~~~c~~~G~~C~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1615 (1945)
+++|++|+||++||+++|+|||+||.. .|+.+++|+|+|+|+|+|++|+.++..|||.||++|||+|+|++|+.|++||
T Consensus 93 ~~~f~dG~CD~~CN~~eC~~DG~DC~~~~~~~la~G~Lvlvv~~~p~~~~~~~~~fLr~ls~~Lrt~v~ik~D~~G~~mi 172 (220)
T 3i08_A 93 KDHFSDGHCDQGCNSAECEWDGLDCAEHVPERLAAGTLVVVVLMPPEQLRNSSFHFLRELSRVLHTNVVFKRDAHGQQMI 172 (220)
T ss_dssp HTTTTSSSCCGGGCSGGGGGGGGTTCTTSCCCBCBSEEEEEEESCHHHHHHTHHHHHHHHHHHHTSEEEECBCTTCCBCE
T ss_pred HHHhCCCccCcccCccccCccCCccccccchhhcCCcEEEEEcCCHHHHHHHHHHHHHHHHHHheeeEEEEECCCCCEEE
Confidence 999999999999999999999999998 5788999999999999999999999999999999999999999999999999
Q ss_pred ccCCCccc
Q psy6358 1616 YQHGGICT 1623 (1945)
Q Consensus 1616 ~~~~~~c~ 1623 (1945)
|||.|+-.
T Consensus 173 ~p~~g~~~ 180 (220)
T 3i08_A 173 FPYYGREE 180 (220)
T ss_dssp EEECC---
T ss_pred EecCCCch
Confidence 99987643
No 4
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.95 E-value=9.1e-32 Score=306.97 Aligned_cols=251 Identities=15% Similarity=0.163 Sum_probs=205.8
Q ss_pred eeecCCCCCceecCCC---CCCCcccccCccccCCCCCCCCeeecCCCCceeeecCCCCCCCCCCCCCCcC------CCC
Q psy6358 161 TCVNTPGSFACNCTQG---FTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVP------CDP 231 (1945)
Q Consensus 161 ~C~n~~g~~~C~C~~G---~~G~~C~~~i~eC~~~~C~~~g~C~~~~gs~~C~C~C~~G~~G~~C~~~~~~------C~~ 231 (1945)
++.|..|+|++.+.+| |+|.+++.++.++.. +|.++|+|++..++|+ |.|++||+|++||..+++ |.+
T Consensus 5 ~~~n~~Gg~s~~~~pgg~~~~g~~~~~n~~~~~~-~c~ngG~C~~g~~~y~--C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s 81 (267)
T 4fbr_A 5 LVQNQWGGSQATWNPGGLWLIGARDKQNVVALDI-KSDDGGKTLKGTMTYN--GEGPIGFRGTLSSANNYTVENQWGGTS 81 (267)
T ss_dssp EEEEECSSTTSCCEEEEEEECCCCSSCCEEEEEE-ECSSTTSEEEEEEEET--TSCCEEEEEEECSTTEEEEEEESSSTT
T ss_pred eEeecCCcccCCcCCCCceeeccccccccccCCC-CcCCCCeecCCCCCeE--EeCCCCcccccccccccccccccCcCC
Confidence 4567788999999999 789999999888775 8999999999999996 788999999999998887 778
Q ss_pred CCCCCCCeeccCCCCccccccCCCcCCCCccccCCCCCCCCCCCCCeecCCCCceeeecCCCCCCCcCccCCCccCCCCC
Q psy6358 232 SPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPS 311 (1945)
Q Consensus 232 ~~C~n~g~C~~~~~~~~~C~C~~G~~G~~C~~~~d~C~~~~C~~~~~C~~~~~~y~C~C~~G~~G~~C~~d~deC~~~~~ 311 (1945)
.||+|+++| |.|.+|+.+ ++|.+.||.++|+|++..++|+|.|++||+|..|+.++|+|...
T Consensus 82 ~pC~nggtc---------------~~G~~c~~~-~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~-- 143 (267)
T 4fbr_A 82 APWQPGGVW---------------VLGARDKQN-IVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQ-- 143 (267)
T ss_dssp SCEEEEEEE---------------ECCCCSSCC-EEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEE--
T ss_pred CcccCCCee---------------eccCccccc-cccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCCccccccc--
Confidence 888888876 457888764 58999999999999999999999999999999999999997532
Q ss_pred CCCCCCeeeccCCCeEEecCCCcccCCCCCCCCCCCCCCCCCCCeeccCCCCeeeeCCCCCccCccCCC-CcccCCCCCC
Q psy6358 312 VCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLE-DACTSNPCHA 390 (1945)
Q Consensus 312 ~C~~~~~C~n~~g~~~C~C~~Gy~G~~C~~~id~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~-d~C~~~~C~~ 390 (1945)
.+.+.+.|.+ +..+|.|..|+.+|+ |.+.||.++++|++.+++|+|+||+||+|.+|+.+ ++|.++++..
T Consensus 144 ~~c~s~pC~n--------gg~c~~G~~c~~~i~-c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~~i~ec~~~~~c~ 214 (267)
T 4fbr_A 144 WGGSAAPWHS--------GGVWVLGTRGKQNVI-NVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSPDTYTVENQWGGS 214 (267)
T ss_dssp CSSTTSCCEE--------EEEEECCSSTTSCEE-EEEEECSSTTSEEEEEEEETTSCCEEEEEEEEETTEEEEEEECSCT
T ss_pred CCcCCccccC--------Ccceecccccccccc-cCCCCCCCCCEeeCCCCCeEEeCCCCccccccccccceeccCCCcc
Confidence 2223333332 122256888887774 66789999999999999999999999999999876 6666555555
Q ss_pred CCcccCCCCcCCceeeecCCCCCCCCCCCCCccccCCccccccCCCCCCCCCCCCCeeeecCCceEEeeCCCccCC
Q psy6358 391 DAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGH 466 (1945)
Q Consensus 391 ~~~C~~~~~~~g~~~C~C~~Gy~G~~C~~d~~eC~~g~~C~~~~~~C~~~~C~~~g~C~~~~g~y~C~C~~G~~G~ 466 (1945)
.+.|.+ .|.+.+-|..|+.+..|+ .||.|+|+|++...+|+|.||+||+|+
T Consensus 215 ~~~c~~----gG~~~~~C~~g~n~~~c~---------------------~~c~ngGtC~dg~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 215 TAPWNP----GGFWMIGARNGQNVVALN---------------------VASSDGGKTLAGTMIYNGEGPIGFRAR 265 (267)
T ss_dssp TSCCEE----EEEEECCCCTTCCEEEEE---------------------EECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred CCcccC----CCeEEEecCCCCccccCC---------------------cCCCCCCEeeCCCcceeecCCCCcccc
Confidence 555554 266777888887765442 479999999999999999999999985
No 5
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.94 E-value=1.1e-30 Score=298.00 Aligned_cols=249 Identities=17% Similarity=0.149 Sum_probs=148.8
Q ss_pred eecCCCCceEecCCC---CCCCCCCCCCCCCCCCCCCCCCeeecCCCCcEEecCCCcccCccCccccC------CCCCCC
Q psy6358 1066 CVNTPGSFACNCTQG---FTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDE------CASNPC 1136 (1945)
Q Consensus 1066 C~n~~gs~~C~C~~G---f~G~~C~~~i~~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~ide------C~~~pC 1136 (1945)
+.|..|+|++.+.+| |+|.++++++.++.. +|.++|+|++.+++|+|.|++||+|++|+++|+| |.+.||
T Consensus 6 ~~n~~Gg~s~~~~pgg~~~~g~~~~~n~~~~~~-~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC 84 (267)
T 4fbr_A 6 VQNQWGGSQATWNPGGLWLIGARDKQNVVALDI-KSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPW 84 (267)
T ss_dssp EEEECSSTTSCCEEEEEEECCCCSSCCEEEEEE-ECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCE
T ss_pred EeecCCcccCCcCCCCceeeccccccccccCCC-CcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcc
Confidence 455668888888888 678888887776654 7888899999888999999999999999888888 666677
Q ss_pred CCCCEEeccCCCceeecCCCccCCCCccCcccCCCCCCCCCCeeccCCCCceeeCCCCCCcCCCccccccCCCCCCCC-C
Q psy6358 1137 LNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHR-G 1215 (1945)
Q Consensus 1137 ~~~g~C~~~~gs~~C~C~~G~~G~~C~~~~d~C~~~~C~~gg~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~-g 1215 (1945)
+++++| |.|.+|+.. ++|++.||.++|+|++...+|+|+|++||+|..|+.++++|...++.. +
T Consensus 85 ~nggtc--------------~~G~~c~~~-~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~ 149 (267)
T 4fbr_A 85 QPGGVW--------------VLGARDKQN-IVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAA 149 (267)
T ss_dssp EEEEEE--------------ECCCCSSCC-EEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTS
T ss_pred cCCCee--------------eccCccccc-cccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCCcccccccCCcCCc
Confidence 776655 456777653 578888888888888888888888888888888877776644322211 1
Q ss_pred EEecCCCCceecccCCcCCCccccccCcCCCCCCCCCCccccCCCCceeecCCCCCCCCccccCccccCCCCCCCCeeec
Q psy6358 1216 ECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVD 1295 (1945)
Q Consensus 1216 ~C~~~~~s~~C~C~~Gy~G~~C~~~i~~C~~~pC~~~g~C~~~~g~y~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~ 1295 (1945)
.|.+ +..+|.|.+|+..| +|.+.||+++|+|++.+++|+|.|++||+|+.|+.+|++|...++...+.|.+
T Consensus 150 pC~n--------gg~c~~G~~c~~~i-~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~~i~ec~~~~~c~~~~c~~ 220 (267)
T 4fbr_A 150 PWHS--------GGVWVLGTRGKQNV-INVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSPDTYTVENQWGGSTAPWNP 220 (267)
T ss_dssp CCEE--------EEEEECCSSTTSCE-EEEEEECSSTTSEEEEEEEETTSCCEEEEEEEEETTEEEEEEECSCTTSCCEE
T ss_pred cccC--------Ccceeccccccccc-ccCCCCCCCCCEeeCCCCCeEEeCCCCccccccccccceeccCCCccCCcccC
Confidence 1111 11112344444433 23344455555555555555555555555555555555433322222222222
Q ss_pred CCCCeeecCCCCccCCccccCCCCCCCCCCCCCCeeeeCCCCceeeCCCCccC
Q psy6358 1296 GINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYD 1348 (1945)
Q Consensus 1296 ~~~~~~C~C~~G~~G~~C~~~i~~C~~~~C~~~g~C~~~~~~~~C~C~~Gy~G 1348 (1945)
. +.+.+.|..|+.+..|+. ||.++|+|++...+|+|+||+||+|
T Consensus 221 g-G~~~~~C~~g~n~~~c~~--------~c~ngGtC~dg~~sy~CeCp~GF~G 264 (267)
T 4fbr_A 221 G-GFWMIGARNGQNVVALNV--------ASSDGGKTLAGTMIYNGEGPIGFRA 264 (267)
T ss_dssp E-EEEECCCCTTCCEEEEEE--------ECSSTTSEEEEEEEETTSCCEEEEE
T ss_pred C-CeEEEecCCCCccccCCc--------CCCCCCEeeCCCcceeecCCCCccc
Confidence 2 122333444444333321 3444444444444444444444443
No 6
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.85 E-value=1.6e-21 Score=205.97 Aligned_cols=123 Identities=42% Similarity=1.092 Sum_probs=101.0
Q ss_pred cCCCCCC--CCCCCCCCeeeeCCCCceeeCCCCccCCCCcccCCCCCCCCCCCCCEeecCCCCceeeCCCCCCCCCCccC
Q psy6358 1315 TNINECA--SNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFD 1392 (1945)
Q Consensus 1315 ~~i~~C~--~~~C~~~g~C~~~~~~~~C~C~~Gy~G~~C~~~~deC~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~ 1392 (1945)
+|||+|+ ++||.++|+|++..++|+|.|++||+|..|+.++++|..+||.++++|++..++|+|.|++||+|..|+.+
T Consensus 3 ~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~ 82 (135)
T 2vj3_A 3 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN 82 (135)
T ss_dssp CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEE
T ss_pred cccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceec
Confidence 3778887 67888888888888888888888888888887888888888888888888888888888888888888878
Q ss_pred CCCCCCCCCCCCCeEeeCCCCceeecCCCCcCCCCcccCCCCCCC
Q psy6358 1393 IDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDCAFK 1437 (1945)
Q Consensus 1393 id~C~~~pC~n~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~ 1437 (1945)
+++|.++||.++|+|++..++|+|.|++||+|.+|++++++|...
T Consensus 83 ~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~i~~C~~~ 127 (135)
T 2vj3_A 83 TDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHHILDA 127 (135)
T ss_dssp CCTTTTCCSTTTCEEEECSSCEEEECCTTEESSSSCEECC-----
T ss_pred CCcccCCCcCCCCEeECCCCCeEEECCCCCcCCccCccCccccCC
Confidence 888888888888888888888888888888888888888888754
No 7
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.84 E-value=5.6e-21 Score=201.89 Aligned_cols=122 Identities=43% Similarity=1.084 Sum_probs=89.2
Q ss_pred cCcccc--CCCCCCCCeeecCCCCeeecCCCCccCCccccCCCCCCCCCCCCCCeeeeCCCCceeeCCCCccCCCCcccC
Q psy6358 1278 NINECY--SNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDV 1355 (1945)
Q Consensus 1278 ~i~~C~--~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~i~~C~~~~C~~~g~C~~~~~~~~C~C~~Gy~G~~C~~~~ 1355 (1945)
+|+||. .+||.++++|++..++|+|.|++||+|..|++++++|.++||.++++|++..++|+|.|++||+|..|+.++
T Consensus 4 dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~ 83 (135)
T 2vj3_A 4 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNT 83 (135)
T ss_dssp CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEEC
T ss_pred ccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceecC
Confidence 567776 567777777777777777777777777777777777777777777777777777777777777777777677
Q ss_pred CCCCCCCCCCCCEeecCCCCceeeCCCCCCCCCCccCCCCCCCC
Q psy6358 1356 DECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSN 1399 (1945)
Q Consensus 1356 deC~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~id~C~~~ 1399 (1945)
++|...||.++++|++..++|+|.|++||+|+.|+++|++|...
T Consensus 84 ~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~i~~C~~~ 127 (135)
T 2vj3_A 84 DECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHHILDA 127 (135)
T ss_dssp CTTTTCCSTTTCEEEECSSCEEEECCTTEESSSSCEECC-----
T ss_pred CcccCCCcCCCCEeECCCCCeEEECCCCCcCCccCccCccccCC
Confidence 77777777777777777777777777777777777777777654
No 8
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.82 E-value=2e-21 Score=217.23 Aligned_cols=145 Identities=24% Similarity=0.616 Sum_probs=125.9
Q ss_pred CCCCCCCCCCeecCCCCceeeecCCCCCCC---cCccCCCccCCC--CCCCCCCCeeeccC-----CCeEEecCCCcccC
Q psy6358 268 CPGNLCQNGATCMDGINKYSCLCLATYTGD---LCEQDVDECSIR--PSVCHNGATCTNSV-----GGFSCICVNGWTGP 337 (1945)
Q Consensus 268 C~~~~C~~~~~C~~~~~~y~C~C~~G~~G~---~C~~d~deC~~~--~~~C~~~~~C~n~~-----g~~~C~C~~Gy~G~ 337 (1945)
..++||.|+ +|++..++|+|.|++||+|. .|+ +||||... +++|.++++|+++. ++|+|.|++||+|.
T Consensus 8 ~~~~pC~ng-~C~~~~g~~~C~C~~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~ 85 (186)
T 1z1y_A 8 TVDTICXNG-QLVQMSNHFXCMCNEGLVHLSENTCE-EXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLX 85 (186)
T ss_dssp CTTCCCBTE-EEEECSSCEEEEECTTEEEEETTEEE-ECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEE
T ss_pred CCCCCCCCC-EeECCCCCeEeECCCCCccCCCCccC-CCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccC
Confidence 356789875 99999999999999999887 785 88999854 57899999999998 89999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCeec----cCCCCeeeeCCCCCcc-----CccCCC--CcccCCCC-CCCCcccCCCCcCCcee
Q psy6358 338 DCSLNIDDCAGAACFNGATCI----DRVGSFYCQCTPGKTG-----LLCHLE--DACTSNPC-HADAICDTNPIINGSYT 405 (1945)
Q Consensus 338 ~C~~~id~C~~~~C~~~~~C~----~~~g~~~C~C~~G~~G-----~~C~~~--d~C~~~~C-~~~~~C~~~~~~~g~~~ 405 (1945)
.++..+++|...||.++++|+ ++.++|+|.|++||+| ..|+++ ++|. +|| +++++|.+.. |+|+
T Consensus 86 ~~~C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~-~~C~~~~~~C~n~~---g~y~ 161 (186)
T 1z1y_A 86 EDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQ-LXCNTDNEVCXNVE---GVYX 161 (186)
T ss_dssp TTEEEEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCC-CCCCTTTEEEEEET---TEEE
T ss_pred CCCCCCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCccc-ccccccCcceecCC---CCee
Confidence 766558999999999999998 8888999999999998 889875 7898 499 8999998754 8999
Q ss_pred eecCCCCCCCCCC
Q psy6358 406 CSCASGYKGVNCS 418 (1945)
Q Consensus 406 C~C~~Gy~G~~C~ 418 (1945)
|.|++||+|..++
T Consensus 162 C~C~~G~~g~~~~ 174 (186)
T 1z1y_A 162 CQCMEGFTFDXEX 174 (186)
T ss_dssp EEECTTCEEETTT
T ss_pred eECCCCCccCccc
Confidence 9999999998765
No 9
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.81 E-value=4.2e-21 Score=214.65 Aligned_cols=145 Identities=26% Similarity=0.571 Sum_probs=122.1
Q ss_pred cCCCCCCCCeeecCCCCeeecCCCCccCC---ccccCCCCCC----CCCCCCCCeeeeCC-----CCceeeCCCCccCCC
Q psy6358 1283 YSNPCRNGAKCVDGINRYSCECLPGYTGL---HCETNINECA----SNPCANGGVCVDLI-----DGFKCECPRGYYDAR 1350 (1945)
Q Consensus 1283 ~~~~C~~~~~C~~~~~~~~C~C~~G~~G~---~C~~~i~~C~----~~~C~~~g~C~~~~-----~~~~C~C~~Gy~G~~ 1350 (1945)
.++||.++ +|++..++|+|.|++||+|. .|+ ++++|+ +.||.++++|+++. ++|+|.|++||+|..
T Consensus 9 ~~~pC~ng-~C~~~~g~~~C~C~~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~ 86 (186)
T 1z1y_A 9 VDTICXNG-QLVQMSNHFXCMCNEGLVHLSENTCE-EXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXE 86 (186)
T ss_dssp TTCCCBTE-EEEECSSCEEEEECTTEEEEETTEEE-ECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEET
T ss_pred CCCCCCCC-EeECCCCCeEeECCCCCccCCCCccC-CCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCC
Confidence 46788865 88888888888888888877 786 788898 67898889999988 789999999998875
Q ss_pred CcccCCCCCCCCCCCCCEee----cCCCCceeeCCCCCCC-----CCCccC-CCCCCCCCC-CCCCeEeeCCCCceeecC
Q psy6358 1351 CLSDVDECASDPCLNGGTCE----DGLNQFICHCKPGYGG-----KRCEFD-IDECGSNPC-QHGGICTDHLNGYTCECQ 1419 (1945)
Q Consensus 1351 C~~~~deC~~~~C~~~g~C~----~~~g~~~C~C~~Gy~G-----~~C~~~-id~C~~~pC-~n~g~C~~~~~~~~C~C~ 1419 (1945)
+.-.+++|...||.++++|+ ++.++|+|.|++||+| ..|+.. +++|. .|| +++++|+++.++|+|.|+
T Consensus 87 ~~C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~-~~C~~~~~~C~n~~g~y~C~C~ 165 (186)
T 1z1y_A 87 DTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQ-LXCNTDNEVCXNVEGVYXCQCM 165 (186)
T ss_dssp TEEEEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCC-CCCCTTTEEEEEETTEEEEEEC
T ss_pred CCCCCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCccc-ccccccCcceecCCCCeeeECC
Confidence 54447899988999889998 7888999999999988 788743 58897 489 889999999999999999
Q ss_pred CCCcCCCCccc
Q psy6358 1420 IGYTGINCEIN 1430 (1945)
Q Consensus 1420 ~G~~G~~C~~~ 1430 (1945)
+||+|..++..
T Consensus 166 ~G~~g~~~~~~ 176 (186)
T 1z1y_A 166 EGFTFDXEXNV 176 (186)
T ss_dssp TTCEEETTTTE
T ss_pred CCCccCccccc
Confidence 99999888753
No 10
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.78 E-value=7e-19 Score=193.58 Aligned_cols=102 Identities=28% Similarity=0.430 Sum_probs=93.8
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFA 1886 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Ga 1886 (1945)
++.+++++||++|+|++.+|.+|+||||+|++.|+.++|++||++|||++. ++.++|++||++||
T Consensus 48 ~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga 127 (169)
T 4gpm_A 48 GHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA 127 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 689999999999999999999999999999999999999999999999886 89999999999999
Q ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCcc
Q psy6358 1887 NREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1887 d~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
+++.+|..|+||||+|+++++.+||++|+++||+...
T Consensus 128 d~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 128 DVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 9999999999999999999999999999999997654
No 11
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.77 E-value=1.3e-19 Score=218.72 Aligned_cols=168 Identities=36% Similarity=0.933 Sum_probs=81.9
Q ss_pred CCCccccCCCCCCCCCCCCCeecCCCCceeeecCCCCCCCcCccCCCccCCCCCCCCCCCeeeccCCCeEEecCCCcccC
Q psy6358 258 GKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGP 337 (1945)
Q Consensus 258 G~~C~~~~d~C~~~~C~~~~~C~~~~~~y~C~C~~G~~G~~C~~d~deC~~~~~~C~~~~~C~n~~g~~~C~C~~Gy~G~ 337 (1945)
+..|.. .+|+ ++|.++|+|.+ .|+|.|++||+|..|+. ++|. .+|.++|+|++ .++|.|++||+|.
T Consensus 143 ~~~C~~--~~C~-~~C~~~G~C~~---~~~C~C~~G~~G~~C~~--~~C~---~~C~~~G~C~~---~~~C~C~~G~~G~ 208 (324)
T 2ygq_A 143 FKTCQQ--AECP-GGCRNGGFCNE---RRICECPDGFHGPHCEK--ALCT---PRCMNGGLCVT---PGFCICPPGFYGV 208 (324)
T ss_dssp EEEECC--CCCS-SCCCSSCEECT---TSCEECCTTEESSSSCE--ESSS---SCCCTTCEECS---SCCEECCTTCBTT
T ss_pred cccccC--CCCC-CCCCCCCEECC---CCeEECCCCCcCCCCCC--CCCC---CCCCCCCEEcC---CCEEeCCCCccCC
Confidence 344543 4564 68999999986 48899999999999975 4674 36999999986 4689999999999
Q ss_pred CCCCCCCCCCCCCCCCCCeeccCCCCeeeeCCCCCccCccCCCCcccCCCCCCCCcccCCCCcCCceeeecCCCCCCCCC
Q psy6358 338 DCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNC 417 (1945)
Q Consensus 338 ~C~~~id~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~d~C~~~~C~~~~~C~~~~~~~g~~~C~C~~Gy~G~~C 417 (1945)
.|+.+ .|. .+|.++++|++ .++|.|++||+|..|+. ++|. +||.++++|. +.++|.|++||+|..|
T Consensus 209 ~C~~~--~C~-~~C~~~G~C~~---~~~C~C~~G~~G~~C~~-~~C~-~~C~~~g~C~------~~~~C~C~~G~~G~~C 274 (324)
T 2ygq_A 209 NCDKA--NCS-TTCFNGGTCFY---PGKCICPPGLEGEQCEI-SKCP-QPCRNGGKCI------GKSKCKCSKGYQGDLC 274 (324)
T ss_dssp TTCBC--CCS-SCCCSSCCBSC---SSCBCCCTTCCTTTTC---------------------------------------
T ss_pred CcccC--cCC-CCCCCCCeeCC---CCeeeCCCCccCCCCCc-CcCC-CcCCCCCEEC------CCCEEECCCCCcCCCC
Confidence 99753 475 68999999976 36899999999999985 5675 7899999996 3578999999999988
Q ss_pred CCCCccccCCccccccCCCCCCCCCCCCCeeeecCCceEEeeCCCccCCCcccCC
Q psy6358 418 SEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKL 472 (1945)
Q Consensus 418 ~~d~~eC~~g~~C~~~~~~C~~~~C~~~g~C~~~~g~y~C~C~~G~~G~~C~~~~ 472 (1945)
+. + +|. .+|.++|+|++ .|+|.|++||+|..|+...
T Consensus 275 ~~--~-------------~C~-~~C~~~g~C~~---~~~C~C~~G~~G~~C~~~~ 310 (324)
T 2ygq_A 275 SK--P-------------VCE-PGCGAHGTCHE---PNKCQCQEGWHGRHCNKRY 310 (324)
T ss_dssp -------------------------------------------------------
T ss_pred cC--C-------------CCC-CCCCCCCEECC---CCEeECCCCCcCCCCCCCC
Confidence 63 2 233 57999999986 5899999999999997654
No 12
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.76 E-value=7.4e-19 Score=193.36 Aligned_cols=109 Identities=28% Similarity=0.349 Sum_probs=102.7
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------- 1872 (1945)
|+.|++. ++.++|++||++|||||.+|.+|+||||+|+..++.+++++||++|++++.
T Consensus 8 L~~Aa~~-------G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~ 80 (169)
T 4gpm_A 8 LIEAAEN-------GNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAEN 80 (169)
T ss_dssp HHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHc-------CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHc
Confidence 5666665 799999999999999999999999999999999999999999999999876
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCcc
Q psy6358 1873 GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1873 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
++.++|++||++||+++.+|..|+||||+|++.++.++|++|+++|++...
T Consensus 81 g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~ 131 (169)
T 4gpm_A 81 GHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNT 131 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 899999999999999999999999999999999999999999999987654
No 13
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.74 E-value=8e-19 Score=211.69 Aligned_cols=158 Identities=36% Similarity=0.933 Sum_probs=75.8
Q ss_pred CCCCCCCccccCCCCceeecCCCCCCCCccccCccccCCCCCCCCeeecCCCCeeecCCCCccCCccccCCCCCCCCCCC
Q psy6358 1247 NPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCA 1326 (1945)
Q Consensus 1247 ~pC~~~g~C~~~~g~y~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~i~~C~~~~C~ 1326 (1945)
++|.++|+|.+ .|+|.|++||+|..|+.+ .|. .+|.++|+|++ .++|.|++||+|..|+. +.|. .+|.
T Consensus 153 ~~C~~~G~C~~---~~~C~C~~G~~G~~C~~~--~C~-~~C~~~G~C~~---~~~C~C~~G~~G~~C~~--~~C~-~~C~ 220 (324)
T 2ygq_A 153 GGCRNGGFCNE---RRICECPDGFHGPHCEKA--LCT-PRCMNGGLCVT---PGFCICPPGFYGVNCDK--ANCS-TTCF 220 (324)
T ss_dssp SCCCSSCEECT---TSCEECCTTEESSSSCEE--SSS-SCCCTTCEECS---SCCEECCTTCBTTTTCB--CCCS-SCCC
T ss_pred CCCCCCCEECC---CCeEECCCCCcCCCCCCC--CCC-CCCCCCCEEcC---CCEEeCCCCccCCCccc--CcCC-CCCC
Confidence 57889999975 588999999999999864 465 47999999975 47899999999999975 3574 6899
Q ss_pred CCCeeeeCCCCceeeCCCCccCCCCcccCCCCCCCCCCCCCEeecCCCCceeeCCCCCCCCCCccCCCCCCCCCCCCCCe
Q psy6358 1327 NGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGI 1406 (1945)
Q Consensus 1327 ~~g~C~~~~~~~~C~C~~Gy~G~~C~~~~deC~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~id~C~~~pC~n~g~ 1406 (1945)
++|+|++ .++|.|++||+|..|+ +++|. .||.++|+|+. .++|.|++||+|+.|+ +++|. .+|.++|+
T Consensus 221 ~~G~C~~---~~~C~C~~G~~G~~C~--~~~C~-~~C~~~g~C~~---~~~C~C~~G~~G~~C~--~~~C~-~~C~~~g~ 288 (324)
T 2ygq_A 221 NGGTCFY---PGKCICPPGLEGEQCE--ISKCP-QPCRNGGKCIG---KSKCKCSKGYQGDLCS--KPVCE-PGCGAHGT 288 (324)
T ss_dssp SSCCBSC---SSCBCCCTTCCTTTTC------------------------------------------------------
T ss_pred CCCeeCC---CCeeeCCCCccCCCCC--cCcCC-CcCCCCCEECC---CCEEECCCCCcCCCCc--CCCCC-CCCCCCCE
Confidence 9999976 4789999999999996 46776 68999999974 5799999999999997 45676 68999999
Q ss_pred EeeCCCCceeecCCCCcCCCCcccC
Q psy6358 1407 CTDHLNGYTCECQIGYTGINCEINI 1431 (1945)
Q Consensus 1407 C~~~~~~~~C~C~~G~~G~~C~~~~ 1431 (1945)
|++ .++|.|++||+|.+|+...
T Consensus 289 C~~---~~~C~C~~G~~G~~C~~~~ 310 (324)
T 2ygq_A 289 CHE---PNKCQCQEGWHGRHCNKRY 310 (324)
T ss_dssp -------------------------
T ss_pred ECC---CCEeECCCCCcCCCCCCCC
Confidence 975 5799999999999998654
No 14
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.74 E-value=2.2e-18 Score=184.12 Aligned_cols=125 Identities=41% Similarity=1.048 Sum_probs=93.4
Q ss_pred ccccCCCCCCCCeeecCC--CCeeecCCCCccCCccccCCCCCCCCCCCCCCeeeeCCCCceeeCCCCccCCCCcccCCC
Q psy6358 1280 NECYSNPCRNGAKCVDGI--NRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDE 1357 (1945)
Q Consensus 1280 ~~C~~~~C~~~~~C~~~~--~~~~C~C~~G~~G~~C~~~i~~C~~~~C~~~g~C~~~~~~~~C~C~~Gy~G~~C~~~~de 1357 (1945)
|+|.++||.++++|++.. ++|+|.|++||+|..|+.. .++... ...| .++++
T Consensus 1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~-~~~~~~------------------------~~~c-~~~~~ 54 (143)
T 4d90_A 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSV-VEVASD------------------------EEEP-TSAGP 54 (143)
T ss_dssp --CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSC-CCCTTT------------------------TTSC-CCCCT
T ss_pred CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccC-cccccc------------------------cccc-ccCCc
Confidence 456667777777776654 4567777777777776532 222110 0111 25788
Q ss_pred CCCCCCCCCCEee-------cCCCCceeeCCCCCCCCCCccCCCCCCCCCCCCCCeEeeCCCCceeecCCCCcCCCCccc
Q psy6358 1358 CASDPCLNGGTCE-------DGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEIN 1430 (1945)
Q Consensus 1358 C~~~~C~~~g~C~-------~~~g~~~C~C~~Gy~G~~C~~~id~C~~~pC~n~g~C~~~~~~~~C~C~~G~~G~~C~~~ 1430 (1945)
|..+||.++++|+ ++.++|+|.|++||+|.+|+.++++|..+||.++++|++..++|+|.|++||+|.+|+..
T Consensus 55 C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~~ 134 (143)
T 4d90_A 55 CTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYK 134 (143)
T ss_dssp TSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTSCBC
T ss_pred CCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCceec
Confidence 9889999999998 667899999999999999988899999999999999999999999999999999999864
No 15
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.73 E-value=4.6e-18 Score=181.71 Aligned_cols=125 Identities=34% Similarity=0.896 Sum_probs=103.6
Q ss_pred CcCCCCCCCCCcEEeecC--CCeEEecCCCCCCCCCCCCCCCCCCCCCCCCCeeccCCCCCCeeeecCCCCccCCCCccC
Q psy6358 868 DDCAFKPCRHGGTCIDLV--NAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQDFACHCGVGWTGRYCNEDV 945 (1945)
Q Consensus 868 deC~~~pC~~~g~C~~~~--~~y~C~C~~G~~G~~C~~~~~~C~~~~C~~g~~C~~~~~~~~~~C~C~~G~~G~~C~~di 945 (1945)
|+|.++||.++|+|++.. ++|+|+|++||+|..|+..+ ++... ...| .++
T Consensus 1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~-~~~~~--------------------------~~~c-~~~ 52 (143)
T 4d90_A 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVV-EVASD--------------------------EEEP-TSA 52 (143)
T ss_dssp --CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCC-CCTTT--------------------------TTSC-CCC
T ss_pred CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCc-ccccc--------------------------cccc-ccC
Confidence 689999999999999876 68999999999999998532 22110 0112 467
Q ss_pred cccCCCCCCCCCCeee-------eCCCCeEeeCCCCcccCCcccCCCCCCCCCCCCCCEEecCCCCeEEecCCCCCCCCC
Q psy6358 946 DECQLSSPCRNGATCH-------NTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHC 1018 (1945)
Q Consensus 946 deC~~~~~C~~~~~C~-------n~~gsy~C~C~~Gy~G~~C~~~~d~C~~~~C~n~g~C~~~~g~y~C~C~~Gy~G~~C 1018 (1945)
++|. ..+|.++++|+ ++.++|+|.|++||+|..|++++++|...||.++++|++..++|+|.|++||+|++|
T Consensus 53 ~~C~-~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c 131 (143)
T 4d90_A 53 GPCT-PNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNC 131 (143)
T ss_dssp CTTS-SCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTS
T ss_pred CcCC-CCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCc
Confidence 8897 78999999999 777899999999999999998999999999999999999999999999999999999
Q ss_pred CcC
Q psy6358 1019 EVD 1021 (1945)
Q Consensus 1019 ~~d 1021 (1945)
+..
T Consensus 132 ~~~ 134 (143)
T 4d90_A 132 QYK 134 (143)
T ss_dssp CBC
T ss_pred eec
Confidence 743
No 16
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.72 E-value=1.4e-18 Score=190.52 Aligned_cols=150 Identities=30% Similarity=0.820 Sum_probs=97.8
Q ss_pred CCCceecCCCCCCCcccccCccccC-CCCCCCCeeecCCCCceeeecCCCCCCCCCCCCCCcCCCCCCCC-CCCeeccCC
Q psy6358 167 GSFACNCTQGFTGPRCETNVNECES-HPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQ-NGGVCRELD 244 (1945)
Q Consensus 167 g~~~C~C~~G~~G~~C~~~i~eC~~-~~C~~~g~C~~~~gs~~C~C~C~~G~~G~~C~~~~~~C~~~~C~-n~g~C~~~~ 244 (1945)
..+.|.|++||+|..|+. +|.. .+|.++++|.. . . +|.|++||+|..|+.. .|. .+|. .+|+|+.
T Consensus 15 ~~~~c~C~~g~~G~~C~~---~C~~~~~c~~~g~C~~-~--g--~C~C~~G~~G~~C~~~--~C~-~~C~~~~g~C~~-- 81 (169)
T 2vj2_A 15 GRSAVTCDDYYYGFGCNK---FCRPRDDFFGHYACDQ-N--G--NKTCMEGWMGPECNRA--ICR-QGCSPKHGSCKL-- 81 (169)
T ss_dssp ------CCTTEETTTTCE---ECCCEEETTEEEEECS-S--C--CEEECTTEESTTSCEE--CCC-TTCCTTTEECSS--
T ss_pred cCeeeeCCCcCcCCCccc---ccCCCCCcCCCCEeCC-C--C--eeECCCCCcCCCCCCC--CCC-CCCCCCCcccCC--
Confidence 456788888888888863 4543 35777777753 2 2 3666788888877653 354 2465 5566753
Q ss_pred CCccccccCCCcCCCCccccCCCCCCCC-CCCCCeecCCCCceeeecCCCCCCCcCccCCCccCCCCCCCCCCCeeecc-
Q psy6358 245 NLNYECECQSGYRGKNCEENIDDCPGNL-CQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNS- 322 (1945)
Q Consensus 245 ~~~~~C~C~~G~~G~~C~~~~d~C~~~~-C~~~~~C~~~~~~y~C~C~~G~~G~~C~~d~deC~~~~~~C~~~~~C~n~- 322 (1945)
.|+|+|++||+|..|+ +|...+ |.++ +|+ ++|+|.|++||+|..|++++++|.. ..+|+++++|+++
T Consensus 82 --~~~C~C~~G~~G~~C~----~C~~~~~C~~g-~C~---~~~~C~C~~G~~G~~C~~~~~~C~~-~~~C~~~g~C~~~~ 150 (169)
T 2vj2_A 82 --PGDCRCQYGWQGLYCD----KCIPHPGCVHG-ICN---EPWQCLCETNWGGQLCDKDLNYCGT-HQPCLNGGTCSNTG 150 (169)
T ss_dssp --TTCCEECTTEESSSSC----EECCCTTCSSE-ECS---STTCCEECTTEETTTTCEESCHHHH-TCCCCTTCEEEECS
T ss_pred --CCeeECCCCCCCCCcc----cCCCCCCCCCC-CcC---CCCEEeCCCCCCCCcccCCCCCCCC-CCCCCCCCEEcCCC
Confidence 4678888888887775 255555 6654 776 4677777777777777767777764 3467777777775
Q ss_pred CCCeEEecCCCcccCCCC
Q psy6358 323 VGGFSCICVNGWTGPDCS 340 (1945)
Q Consensus 323 ~g~~~C~C~~Gy~G~~C~ 340 (1945)
.++|+|+|++||+|+.|+
T Consensus 151 ~~~~~C~C~~G~~G~~Ce 168 (169)
T 2vj2_A 151 PDKYQCSCPEGYSGPNCE 168 (169)
T ss_dssp TTCEEEECCTTCCSTTSC
T ss_pred CCCcEeECCCCCcCcCcC
Confidence 677777777777777775
No 17
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.72 E-value=1.2e-18 Score=191.13 Aligned_cols=150 Identities=30% Similarity=0.818 Sum_probs=108.2
Q ss_pred CCceeecCCCCCCCCccccCccccC-CCCCCCCeeecCCCCeeecCCCCccCCccccCCCCCCCCCCC-CCCeeeeCCCC
Q psy6358 1260 NGYQCRCKPGTSGTNCEININECYS-NPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCA-NGGVCVDLIDG 1337 (1945)
Q Consensus 1260 g~y~C~C~~G~~G~~C~~~i~~C~~-~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~i~~C~~~~C~-~~g~C~~~~~~ 1337 (1945)
..+.|.|++||.|..|+. +|.. .+|.++++|+. ..+|+|++||+|..|+.+ +|.. +|. .+|+|++ .
T Consensus 15 ~~~~c~C~~g~~G~~C~~---~C~~~~~c~~~g~C~~---~g~C~C~~G~~G~~C~~~--~C~~-~C~~~~g~C~~---~ 82 (169)
T 2vj2_A 15 GRSAVTCDDYYYGFGCNK---FCRPRDDFFGHYACDQ---NGNKTCMEGWMGPECNRA--ICRQ-GCSPKHGSCKL---P 82 (169)
T ss_dssp ------CCTTEETTTTCE---ECCCEEETTEEEEECS---SCCEEECTTEESTTSCEE--CCCT-TCCTTTEECSS---T
T ss_pred cCeeeeCCCcCcCCCccc---ccCCCCCcCCCCEeCC---CCeeECCCCCcCCCCCCC--CCCC-CCCCCCcccCC---C
Confidence 456777777777777763 3443 24666677753 456888888888888653 4643 465 4567865 5
Q ss_pred ceeeCCCCccCCCCcccCCCCCCCC-CCCCCEeecCCCCceeeCCCCCCCCCCccCCCCCCC-CCCCCCCeEeeC-CCCc
Q psy6358 1338 FKCECPRGYYDARCLSDVDECASDP-CLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGS-NPCQHGGICTDH-LNGY 1414 (1945)
Q Consensus 1338 ~~C~C~~Gy~G~~C~~~~deC~~~~-C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~id~C~~-~pC~n~g~C~~~-~~~~ 1414 (1945)
|+|+|++||+|..|+ +|...| |.++ +|+ ++|+|+|++||+|..|+.++++|.+ .||+++|+|++. .++|
T Consensus 83 ~~C~C~~G~~G~~C~----~C~~~~~C~~g-~C~---~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~ 154 (169)
T 2vj2_A 83 GDCRCQYGWQGLYCD----KCIPHPGCVHG-ICN---EPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKY 154 (169)
T ss_dssp TCCEECTTEESSSSC----EECCCTTCSSE-ECS---STTCCEECTTEETTTTCEESCHHHHTCCCCTTCEEEECSTTCE
T ss_pred CeeECCCCCCCCCcc----cCCCCCCCCCC-CcC---CCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEcCCCCCCc
Confidence 788899999888885 466666 7754 887 5788999999999999888888875 789999999886 7889
Q ss_pred eeecCCCCcCCCCcc
Q psy6358 1415 TCECQIGYTGINCEI 1429 (1945)
Q Consensus 1415 ~C~C~~G~~G~~C~~ 1429 (1945)
+|+|++||+|.+|++
T Consensus 155 ~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 155 QCSCPEGYSGPNCEI 169 (169)
T ss_dssp EEECCTTCCSTTSCC
T ss_pred EeECCCCCcCcCcCC
Confidence 999999999998873
No 18
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.71 E-value=1.3e-17 Score=217.33 Aligned_cols=165 Identities=28% Similarity=0.661 Sum_probs=142.6
Q ss_pred cCCCCCCCCCCccccCCCCce---eecCCCCCCCCccccC--------ccccC----CCCCCCCeeecCCCCeeecCC--
Q psy6358 1243 ECASNPCQFGGQCEDLINGYQ---CRCKPGTSGTNCEINI--------NECYS----NPCRNGAKCVDGINRYSCECL-- 1305 (1945)
Q Consensus 1243 ~C~~~pC~~~g~C~~~~g~y~---C~C~~G~~G~~C~~~i--------~~C~~----~~C~~~~~C~~~~~~~~C~C~-- 1305 (1945)
+|.++||.++++|.+..|.|. |.|++||+|..|+.++ ++|.. .+|.++|+|++ ++|.|+
T Consensus 436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~C~C~~~ 511 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQCVCHSS 511 (690)
T ss_dssp GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS----SSEEECCC
T ss_pred CCcCCCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC----CeeEeecC
Confidence 567788999999988788888 9999999999998776 67876 35999999984 589999
Q ss_pred --CCccCCccccCCCCCCC---CCCCCCCeeeeCCCCceeeCCCCccCCCCc--ccCCCCCC---CCCCCCCEeecCCCC
Q psy6358 1306 --PGYTGLHCETNINECAS---NPCANGGVCVDLIDGFKCECPRGYYDARCL--SDVDECAS---DPCLNGGTCEDGLNQ 1375 (1945)
Q Consensus 1306 --~G~~G~~C~~~i~~C~~---~~C~~~g~C~~~~~~~~C~C~~Gy~G~~C~--~~~deC~~---~~C~~~g~C~~~~g~ 1375 (1945)
+||+|..|+.++++|.. .+|.++|+|++ ++|.|++||+|..|+ .++++|.. .+|.++|+|++.
T Consensus 512 ~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~g--- 584 (690)
T 3fcs_B 512 DFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECG--- 584 (690)
T ss_dssp SSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEETT---
T ss_pred CCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeCC---
Confidence 99999999988899985 48999999986 799999999999998 67889986 679999999863
Q ss_pred ceeeC-CCCCCCCCCccCCCCCCCCCCCCCCeEeeCCCCceeecCCCCcCCCCcc
Q psy6358 1376 FICHC-KPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEI 1429 (1945)
Q Consensus 1376 ~~C~C-~~Gy~G~~C~~~id~C~~~pC~n~g~C~~~~~~~~C~C~~G~~G~~C~~ 1429 (1945)
+|.| ++||+|.+|+. ...| +.||.++++|++ |..||+|..|+.
T Consensus 585 -~C~C~~~Gy~G~~Ce~-C~~C-~~~C~~~g~Cv~--------C~~g~tG~~C~~ 628 (690)
T 3fcs_B 585 -SCVCIQPGSYGDTCEK-CPTC-PDACTFKKECVE--------CKKFDRGALHDE 628 (690)
T ss_dssp -EEECCSTTCBSTTSCB-CTTS-CCTTTSCCGGGT--------TTTTCCSSSSSS
T ss_pred -EEECCCCCccCCCcCc-CCCC-CCCCCCCCCccc--------CCCCCccCCCCc
Confidence 8999 99999999984 3456 578999999975 999999999875
No 19
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.70 E-value=3.2e-17 Score=173.16 Aligned_cols=104 Identities=24% Similarity=0.316 Sum_probs=98.2
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------- 1872 (1945)
||+|+.. ++.++|++||++|++++.+|..|+||||+|+..++.++|++||++|++++.
T Consensus 18 l~~A~~~-------g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 18 LLEAARA-------GQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp HHHHHHH-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred HHHHHHh-------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 6666665 799999999999999999999999999999999999999999999999876
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCC
Q psy6358 1873 GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHI 1918 (1945)
Q Consensus 1873 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~g 1918 (1945)
++.++|++||++|++++.+|..|+||||+|+..++.++|++|+++|
T Consensus 91 ~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 8899999999999999999999999999999999999999999986
No 20
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.70 E-value=9.9e-18 Score=196.73 Aligned_cols=100 Identities=20% Similarity=0.264 Sum_probs=61.7
Q ss_pred CcHHHHHHHHHCCC-CccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcC
Q psy6358 1822 NTDDCASYLINADA-DINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNF 1885 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~ga-dvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~G 1885 (1945)
++.++|++||++++ +++.+|..|+||||+|++.++.++|++||++|++++. ++.++|++||++|
T Consensus 101 ~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g 180 (253)
T 1yyh_A 101 DAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG 180 (253)
T ss_dssp TCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 45566666666654 5666666666666666666666666666666666554 5566666666666
Q ss_pred CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC
Q psy6358 1886 ANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRS 1921 (1945)
Q Consensus 1886 ad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 1921 (1945)
|+++.+|..|+||||+|+..++.++|++|+++|++.
T Consensus 181 a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 216 (253)
T 1yyh_A 181 ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR 216 (253)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc
Confidence 666666666666666666666666666666666554
No 21
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.70 E-value=1.1e-17 Score=176.66 Aligned_cols=105 Identities=26% Similarity=0.328 Sum_probs=98.3
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------- 1872 (1945)
||+|+.. ++.++|++||++|++++.+|..|+||||+|++ ++.++|++||++|++++.
T Consensus 16 L~~A~~~-------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 87 (136)
T 1d9s_A 16 LATAAAR-------GQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAR 87 (136)
T ss_dssp HHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHH
T ss_pred HHHHHHc-------CCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHH
Confidence 5555554 78999999999999999999999999999999 999999999999999765
Q ss_pred -CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q psy6358 1873 -GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPR 1920 (1945)
Q Consensus 1873 -g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 1920 (1945)
++.++|++||++|++++.+|..|+||||+|+..++.++|++|+++||+
T Consensus 88 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 88 EGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 789999999999999999999999999999999999999999999875
No 22
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.70 E-value=2.3e-17 Score=214.97 Aligned_cols=170 Identities=31% Similarity=0.755 Sum_probs=139.5
Q ss_pred cccCCCCCCCCeeecCCCCcee-eecCCCCCCCCCCCCCC--------cCCCC----CCCCCCCeeccCCCCccccccC-
Q psy6358 188 ECESHPCQNDGSCLDDPGTFRC-VCMCEPGYTGQNCESKY--------VPCDP----SPCQNGGVCRELDNLNYECECQ- 253 (1945)
Q Consensus 188 eC~~~~C~~~g~C~~~~gs~~C-~C~C~~G~~G~~C~~~~--------~~C~~----~~C~n~g~C~~~~~~~~~C~C~- 253 (1945)
+|...||.++++|.+..|+|.+ +|.|++||+|..|+..+ ++|.+ .+|.++|+|.. ++|.|+
T Consensus 436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~-----g~C~C~~ 510 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC-----GQCVCHS 510 (690)
T ss_dssp GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS-----SSEEECC
T ss_pred CCcCCCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC-----CeeEeec
Confidence 7888999999999988887741 16778999999998765 56765 45999999972 689999
Q ss_pred ---CCcCCCCccccCCCCCC---CCCCCCCeecCCCCceeeecCCCCCCCcCc--cCCCccCCCC-CCCCCCCeeeccCC
Q psy6358 254 ---SGYRGKNCEENIDDCPG---NLCQNGATCMDGINKYSCLCLATYTGDLCE--QDVDECSIRP-SVCHNGATCTNSVG 324 (1945)
Q Consensus 254 ---~G~~G~~C~~~~d~C~~---~~C~~~~~C~~~~~~y~C~C~~G~~G~~C~--~d~deC~~~~-~~C~~~~~C~n~~g 324 (1945)
+||+|..|+.++++|.. .+|.++|+|++ ++|.|++||+|..|+ .++++|.... .+|.++|+|++ +
T Consensus 511 ~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~--g 584 (690)
T 3fcs_B 511 SDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC--G 584 (690)
T ss_dssp CSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEET--T
T ss_pred CCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeC--C
Confidence 99999999988889985 48999999986 789999999999998 6788897533 57999999976 2
Q ss_pred CeEEec-CCCcccCCCCCCCCCCCCCCCCCCCeeccCCCCeeeeCCCCCccCccCCC
Q psy6358 325 GFSCIC-VNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLE 380 (1945)
Q Consensus 325 ~~~C~C-~~Gy~G~~C~~~id~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~ 380 (1945)
+|.| ++||+|..|+. ...| ..+|.++++|++ |.+||+|..|+..
T Consensus 585 --~C~C~~~Gy~G~~Ce~-C~~C-~~~C~~~g~Cv~--------C~~g~tG~~C~~~ 629 (690)
T 3fcs_B 585 --SCVCIQPGSYGDTCEK-CPTC-PDACTFKKECVE--------CKKFDRGALHDEN 629 (690)
T ss_dssp --EEECCSTTCBSTTSCB-CTTS-CCTTTSCCGGGT--------TTTTCCSSSSSSS
T ss_pred --EEECCCCCccCCCcCc-CCCC-CCCCCCCCCccc--------CCCCCccCCCCcc
Confidence 8999 99999999975 2345 468999999986 8999999887753
No 23
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.69 E-value=5.8e-17 Score=185.69 Aligned_cols=101 Identities=59% Similarity=0.897 Sum_probs=96.9
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFA 1886 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Ga 1886 (1945)
++.+++++|+++|++++.+|..|+||||+|++.++.++|++||++|++++. ++.++|++||++||
T Consensus 103 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 182 (223)
T 2f8y_A 103 AVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 182 (223)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC
Confidence 689999999999999999999999999999999999999999999999876 89999999999999
Q ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCc
Q psy6358 1887 NREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSP 1922 (1945)
Q Consensus 1887 d~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 1922 (1945)
+++.+|..|+|||++|+++++.+|+++|+++|+...
T Consensus 183 ~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 183 NRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred CCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 999999999999999999999999999999997644
No 24
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.68 E-value=1.1e-16 Score=165.41 Aligned_cols=99 Identities=30% Similarity=0.432 Sum_probs=95.8
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFA 1886 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Ga 1886 (1945)
++.++|++|+++|++++.+|..|+||||+|+..++.+++++|+++|++++. ++.+++++||++|+
T Consensus 13 ~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~ 92 (126)
T 1n0r_A 13 GHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (126)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCC
Confidence 789999999999999999999999999999999999999999999999865 88999999999999
Q ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q psy6358 1887 NREITDHMDRLPRDVASERLHHDIVRLLDEHIPR 1920 (1945)
Q Consensus 1887 d~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 1920 (1945)
+++.+|..|+||||+|+..++.++|++|+++||+
T Consensus 93 ~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 93 DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999985
No 25
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.68 E-value=5.4e-17 Score=181.88 Aligned_cols=97 Identities=25% Similarity=0.310 Sum_probs=80.6
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFA 1886 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Ga 1886 (1945)
++.++|++||++|++++.+|..|+||||+|+..++.++|++||++|++++. ++.++|++||++|+
T Consensus 79 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 158 (192)
T 2rfm_A 79 NRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGA 158 (192)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 577888888888888888888888888888888888888888888888765 77888888888888
Q ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCC
Q psy6358 1887 NREITDHMDRLPRDVASERLHHDIVRLLDEHI 1918 (1945)
Q Consensus 1887 d~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~g 1918 (1945)
+++.+|..|+||||+|+..++.++|++|++++
T Consensus 159 ~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 159 DISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp CTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 88888888888888888888888888888764
No 26
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.68 E-value=5.9e-17 Score=192.30 Aligned_cols=89 Identities=22% Similarity=0.224 Sum_probs=83.7
Q ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC----------------CCHHHHHHHHHcCCCCCCcCCCCCCHHH
Q psy6358 1837 INVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE----------------GSYGACKALLDNFANREITDHMDRLPRD 1900 (1945)
Q Consensus 1837 vn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~----------------g~~~~v~~LL~~Gad~~~~d~~G~TpL~ 1900 (1945)
++.+|..|+||||+|++.++.++|++||++|++++. ++.++|++||++||+++++|..|+||||
T Consensus 151 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~ 230 (282)
T 1oy3_D 151 LEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLG 230 (282)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHH
Confidence 788899999999999999999999999999999765 8899999999999999999999999999
Q ss_pred HHHHcCcHHHHHHHHhCCCCCccch
Q psy6358 1901 VASERLHHDIVRLLDEHIPRSPQMV 1925 (1945)
Q Consensus 1901 ~A~~~g~~eiv~~Ll~~ga~~~~~~ 1925 (1945)
+|+.+++.+||++|+++|++.....
T Consensus 231 ~A~~~~~~~~v~~Ll~~ga~~~~~~ 255 (282)
T 1oy3_D 231 SALLRPNPILARLLRAHGAPEPEDG 255 (282)
T ss_dssp HHHTSSCHHHHHHHHHTTCCCCCCC
T ss_pred HHHHcCCcHHHHHHHHcCCCcCcCC
Confidence 9999999999999999999876543
No 27
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.67 E-value=4.5e-17 Score=188.70 Aligned_cols=102 Identities=24% Similarity=0.278 Sum_probs=79.6
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC------C---------------CCHHHHHH
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPR------E---------------GSYGACKA 1880 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn------~---------------g~~~~v~~ 1880 (1945)
++.++|++||++|++++.+|..|+||||+|++.++.++|++||+++++++ . ++.++|++
T Consensus 56 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 135 (236)
T 1ikn_D 56 NQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVEL 135 (236)
T ss_dssp TCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHH
Confidence 57788888888888888888888888888888888888888888876521 1 77788888
Q ss_pred HHHcCCCCCCcCC-CCCCHHHHHHHcCcHHHHHHHHhCCCCCcc
Q psy6358 1881 LLDNFANREITDH-MDRLPRDVASERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1881 LL~~Gad~~~~d~-~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
||++|++++.++. .|+||||+|+..++.++|++|+++|++...
T Consensus 136 Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 179 (236)
T 1ikn_D 136 LVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNR 179 (236)
T ss_dssp HHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCC
T ss_pred HHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 8888888888876 788888888888888888888888776443
No 28
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.67 E-value=2.2e-16 Score=171.42 Aligned_cols=99 Identities=19% Similarity=0.228 Sum_probs=93.4
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFA 1886 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Ga 1886 (1945)
++.++|++||++|++++.+|..|+||||+|++.++.++|++||++|++++. ++.++|++||++|+
T Consensus 48 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 127 (162)
T 1ihb_A 48 GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTA 127 (162)
T ss_dssp SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSC
T ss_pred CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccC
Confidence 478999999999999999999999999999999999999999999999876 89999999999999
Q ss_pred C-CCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q psy6358 1887 N-REITDHMDRLPRDVASERLHHDIVRLLDEHIPR 1920 (1945)
Q Consensus 1887 d-~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 1920 (1945)
+ ++.+|..|+||||+|+..++.++|++|+++||+
T Consensus 128 ~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 128 SNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 8 699999999999999999999999999999985
No 29
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.67 E-value=2.6e-16 Score=172.66 Aligned_cols=104 Identities=23% Similarity=0.333 Sum_probs=97.4
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------- 1872 (1945)
||+|+.. ++.++|++||++|++++.+|..|+||||+|+..++.+++++||++|++++.
T Consensus 51 L~~A~~~-------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 123 (169)
T 2y1l_E 51 LHLAAFN-------GHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMF 123 (169)
T ss_dssp HHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHc-------CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 6666665 689999999999999999999999999999999999999999999999876
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCC
Q psy6358 1873 GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHI 1918 (1945)
Q Consensus 1873 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~g 1918 (1945)
++.++|++||++|++++.+|..|+||||+|++.++.+||++|+++|
T Consensus 124 ~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 124 GHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 8899999999999999999999999999999999999999999986
No 30
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.67 E-value=6.6e-17 Score=177.38 Aligned_cols=109 Identities=28% Similarity=0.308 Sum_probs=102.4
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------- 1872 (1945)
||.|+.. ++.++|++||++|++++.+|..|+||||+|++.++.++|++||++|++++.
T Consensus 18 l~~A~~~-------g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 90 (169)
T 2y1l_E 18 LLEAARA-------GRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALF 90 (169)
T ss_dssp HHHHHHH-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHc-------CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 6666666 799999999999999999999999999999999999999999999999865
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCcc
Q psy6358 1873 GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1873 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
++.++|++||++|++++.+|..|+||||+|+..++.++|++|+++|++...
T Consensus 91 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 141 (169)
T 2y1l_E 91 GHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNA 141 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 889999999999999999999999999999999999999999999987543
No 31
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.67 E-value=8.6e-17 Score=176.71 Aligned_cols=108 Identities=19% Similarity=0.213 Sum_probs=100.9
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------- 1872 (1945)
||+|+.. ++.++|++||++|++++.+|..|+||||+|+..++.++|++||++|++++.
T Consensus 40 L~~A~~~-------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 112 (172)
T 3v30_A 40 LIWASAF-------GEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRG 112 (172)
T ss_dssp HHHHHHT-------TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHc-------CCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 6666655 789999999999999999999999999999999999999999999999876
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCc
Q psy6358 1873 GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSP 1922 (1945)
Q Consensus 1873 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 1922 (1945)
++.++|++||++|++++.+|..|+||||+|+..++.+++++|++++++..
T Consensus 113 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (172)
T 3v30_A 113 NHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLF 162 (172)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999987543
No 32
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.66 E-value=6.4e-17 Score=200.33 Aligned_cols=107 Identities=12% Similarity=0.103 Sum_probs=100.4
Q ss_pred CCCcccc-----C--cHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCC----------
Q psy6358 1815 EGRDCLI-----N--TDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVN-----PRE---------- 1872 (1945)
Q Consensus 1815 ~g~tpL~-----~--~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gad-----vn~---------- 1872 (1945)
.|+|||| + +.++|++||++|++++.+|..|+||||+|++.++.++|++||++|++ ++.
T Consensus 137 ~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~ 216 (364)
T 3ljn_A 137 KGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLH 216 (364)
T ss_dssp SCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTH
T ss_pred CCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHH
Confidence 5666664 6 89999999999999999999999999999999999999999999998 665
Q ss_pred -----CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC
Q psy6358 1873 -----GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRS 1921 (1945)
Q Consensus 1873 -----g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 1921 (1945)
++.++|++||++||+++++|..|+||||+|+..++.+||++|++++++.
T Consensus 217 ~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 217 WAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp HHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCch
Confidence 8999999999999999999999999999999999999999999998764
No 33
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.66 E-value=7.7e-17 Score=189.14 Aligned_cols=101 Identities=58% Similarity=0.894 Sum_probs=92.6
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFA 1886 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Ga 1886 (1945)
++.++|++||++|++++.+|..|+||||+|++.++.++|++||++|++++. ++.++|++||++||
T Consensus 135 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga 214 (253)
T 1yyh_A 135 AVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 214 (253)
T ss_dssp TCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 678999999999999999999999999999999999999999999999876 89999999999999
Q ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCc
Q psy6358 1887 NREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSP 1922 (1945)
Q Consensus 1887 d~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 1922 (1945)
+++++|..|+||||+|+++++.+|+++|+.....++
T Consensus 215 ~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~~~~ 250 (253)
T 1yyh_A 215 NRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHHH 250 (253)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHC------
T ss_pred CccccccCCCCHHHHHHHcCCHHHHHHHHHHhhhcc
Confidence 999999999999999999999999999998865443
No 34
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.66 E-value=6.8e-17 Score=186.22 Aligned_cols=102 Identities=25% Similarity=0.294 Sum_probs=95.6
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFA 1886 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Ga 1886 (1945)
++.++|++|+++|++++.+|..|+||||+|+..++.+++++||++|++++. ++.++|++||++|+
T Consensus 84 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 163 (231)
T 3aji_A 84 GXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKA 163 (231)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Confidence 688999999999999999999999999999999999999999999999775 88999999999999
Q ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCcc
Q psy6358 1887 NREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1887 d~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
+++.+|..|+||||+|+..++.++|++|+++|++...
T Consensus 164 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 200 (231)
T 3aji_A 164 STNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYI 200 (231)
T ss_dssp CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred CccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
Confidence 9999999999999999999999999999999987654
No 35
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.66 E-value=1.3e-16 Score=182.80 Aligned_cols=109 Identities=21% Similarity=0.259 Sum_probs=97.9
Q ss_pred CCCcccc-----CcHHHHHHHHHCCC-CccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------C
Q psy6358 1815 EGRDCLI-----NTDDCASYLINADA-DINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------G 1873 (1945)
Q Consensus 1815 ~g~tpL~-----~~~~~v~~Ll~~ga-dvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g 1873 (1945)
.|+|||| ++.++|++||++++ +++.++..|+||||+|++.++.++|++||++|++++. +
T Consensus 57 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 136 (223)
T 2f8y_A 57 MGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVN 136 (223)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcC
Confidence 3455554 68999999999987 8999999999999999999999999999999999875 8
Q ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCcc
Q psy6358 1874 SYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1874 ~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
+.++|++||++|++++.+|..|+||||+|++.++.++|++|+++|++...
T Consensus 137 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 186 (223)
T 2f8y_A 137 NVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI 186 (223)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 89999999999999999999999999999999999999999999987543
No 36
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.65 E-value=9.2e-17 Score=173.86 Aligned_cols=109 Identities=24% Similarity=0.313 Sum_probs=96.1
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------- 1872 (1945)
||+|+.. ++.++|++||++|++++.+|..|+||||+|+ .++.++|++||++|++++.
T Consensus 16 L~~A~~~-------g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~ 87 (156)
T 1bi7_B 16 LATAAAR-------GRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAR 87 (156)
T ss_dssp HHHHHHH-------TCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHH
T ss_pred HHHHHHc-------CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHH
Confidence 5555554 7899999999999999999999999999985 8999999999999999876
Q ss_pred -CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCccc
Q psy6358 1873 -GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQM 1924 (1945)
Q Consensus 1873 -g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~~ 1924 (1945)
++.++|++||++||+++.+|..|+||||+|+..++.++|++|+++|++....
T Consensus 88 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~ 140 (156)
T 1bi7_B 88 EGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGS 140 (156)
T ss_dssp HTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------
T ss_pred CCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCcc
Confidence 7889999999999999999999999999999999999999999999987654
No 37
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.65 E-value=3.5e-17 Score=194.12 Aligned_cols=103 Identities=18% Similarity=0.213 Sum_probs=93.8
Q ss_pred CcHHHHHHHHHCCCCccccCC--------------CCCCHHHHHHHcCCHHHHHHHHH---CCCCCCC------------
Q psy6358 1822 NTDDCASYLINADADINVPDN--------------SGKTALHWAAAVNNIDAVNILLS---HGVNPRE------------ 1872 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~--------------~G~T~Lh~Aa~~g~~~iv~~LL~---~Gadvn~------------ 1872 (1945)
++.++|++||++|++++.++. .|+||||+|++.++.++|++||+ +|++++.
T Consensus 112 g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A 191 (273)
T 2pnn_A 112 RNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHAL 191 (273)
T ss_dssp TCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHH
T ss_pred CCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHH
Confidence 789999999999999999997 79999999999999999999999 9999876
Q ss_pred ---CC---------HHHHHHHHHcCCCCC-------CcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCccc
Q psy6358 1873 ---GS---------YGACKALLDNFANRE-------ITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQM 1924 (1945)
Q Consensus 1873 ---g~---------~~~v~~LL~~Gad~~-------~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~~ 1924 (1945)
++ .++|++||++||+++ ++|..|+||||+|++.++.+||++|+++||+.|..
T Consensus 192 ~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~ 262 (273)
T 2pnn_A 192 VEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPEC 262 (273)
T ss_dssp HHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC----
T ss_pred HHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchh
Confidence 45 789999999999997 58999999999999999999999999999965554
No 38
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.65 E-value=1.5e-16 Score=176.13 Aligned_cols=111 Identities=23% Similarity=0.188 Sum_probs=103.6
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------- 1872 (1945)
||+|+.. ++.++|++||++|++++.+|..|+||||+|+..++.++|++||++|++++.
T Consensus 43 L~~A~~~-------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 115 (179)
T 3f6q_A 43 LHWACRE-------GRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFW 115 (179)
T ss_dssp HHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHc-------CcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 6666655 689999999999999999999999999999999999999999999999876
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCccch
Q psy6358 1873 GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQMV 1925 (1945)
Q Consensus 1873 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~~~ 1925 (1945)
++.++|++||++||+++++|..|+|||++|+..++.+++++|+++|++.....
T Consensus 116 ~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~ 168 (179)
T 3f6q_A 116 GQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIP 168 (179)
T ss_dssp TCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBC
T ss_pred CCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCC
Confidence 88999999999999999999999999999999999999999999999876543
No 39
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.65 E-value=4.9e-16 Score=169.78 Aligned_cols=100 Identities=29% Similarity=0.280 Sum_probs=65.0
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFA 1886 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Ga 1886 (1945)
++.++|++||+.+++++.+|..|+||||+|++.++.++|++||++|++++. ++.++|++||++|+
T Consensus 14 g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 93 (167)
T 3v31_A 14 GEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGV 93 (167)
T ss_dssp TCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Confidence 466666666666666666666666666666666666666666666666553 56666666666666
Q ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC
Q psy6358 1887 NREITDHMDRLPRDVASERLHHDIVRLLDEHIPRS 1921 (1945)
Q Consensus 1887 d~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 1921 (1945)
+++.+|..|+||||+|+..++.++|++|+++|++.
T Consensus 94 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 128 (167)
T 3v31_A 94 DVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADP 128 (167)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 66666666666666666666666666666666554
No 40
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.65 E-value=3.8e-16 Score=153.39 Aligned_cols=87 Identities=33% Similarity=0.477 Sum_probs=78.9
Q ss_pred CCcccc-----CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC
Q psy6358 1816 GRDCLI-----NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDNFANREI 1890 (1945)
Q Consensus 1816 g~tpL~-----~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~g~~~~v~~LL~~Gad~~~ 1890 (1945)
|+|||| ++.++|++||+.|+++|.+|..|+||||+|++.++.++|++||++| ++++.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g------------------a~~~~ 63 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG------------------ADVNA 63 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT------------------CCTTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC------------------CCCCc
Confidence 455554 6899999999999999999999999999999999999998888777 77788
Q ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q psy6358 1891 TDHMDRLPRDVASERLHHDIVRLLDEHIPR 1920 (1945)
Q Consensus 1891 ~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 1920 (1945)
+|..|+||||+|+..++.++|++|+++||+
T Consensus 64 ~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 64 KDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999974
No 41
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.65 E-value=1.6e-16 Score=173.73 Aligned_cols=99 Identities=21% Similarity=0.281 Sum_probs=95.3
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFA 1886 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Ga 1886 (1945)
++.++|++||++|++++.+|..|+||||+|+..++.++|++||++|++++. ++.++|++||++|+
T Consensus 47 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 126 (167)
T 3v31_A 47 GQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA 126 (167)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 689999999999999999999999999999999999999999999999876 88999999999999
Q ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q psy6358 1887 NREITDHMDRLPRDVASERLHHDIVRLLDEHIPR 1920 (1945)
Q Consensus 1887 d~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 1920 (1945)
+++.+|..|+||||+|+..++.+++++|++++++
T Consensus 127 ~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 127 DPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998654
No 42
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.65 E-value=2.2e-17 Score=195.83 Aligned_cols=99 Identities=20% Similarity=0.211 Sum_probs=53.0
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFA 1886 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Ga 1886 (1945)
++.++|++||+.|++++.++..|.||||+|+..++.+++++||++|++++. ++.++|++||++||
T Consensus 97 g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga 176 (269)
T 4b93_B 97 GRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGA 176 (269)
T ss_dssp TCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTC
T ss_pred CcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC
Confidence 344555555555555555555555555555555555555555555555443 44555555555555
Q ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q psy6358 1887 NREITDHMDRLPRDVASERLHHDIVRLLDEHIPR 1920 (1945)
Q Consensus 1887 d~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 1920 (1945)
+++.+|..|+||||+|+..++.++|++||++|++
T Consensus 177 dvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad 210 (269)
T 4b93_B 177 SINASNNKGNTALHEAVIEKHVFVVELLLLHGAS 210 (269)
T ss_dssp CTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCC
Confidence 5555555555555555555555555555555544
No 43
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.65 E-value=2.8e-16 Score=186.34 Aligned_cols=106 Identities=20% Similarity=0.239 Sum_probs=90.8
Q ss_pred CCCcccc-----CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CC
Q psy6358 1815 EGRDCLI-----NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GS 1874 (1945)
Q Consensus 1815 ~g~tpL~-----~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~ 1874 (1945)
.|+|||+ ++.+++++||++|+++|.+|..|+||||+|++.|+.++|++||++|||++. ++
T Consensus 118 ~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~ 197 (269)
T 4b93_B 118 DQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKH 197 (269)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred CCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCC
Confidence 5677775 689999999999999999999999999999999999999999999999887 89
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc-HHHHHHHHhCCCC
Q psy6358 1875 YGACKALLDNFANREITDHMDRLPRDVASERLH-HDIVRLLDEHIPR 1920 (1945)
Q Consensus 1875 ~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~-~eiv~~Ll~~ga~ 1920 (1945)
.++|++||++|||++++|..|+||||+|+++++ .+++++|++.++.
T Consensus 198 ~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~ 244 (269)
T 4b93_B 198 VFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVAS 244 (269)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC-------
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchh
Confidence 999999999999999999999999999988776 3455555555443
No 44
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.65 E-value=2.9e-16 Score=180.44 Aligned_cols=105 Identities=21% Similarity=0.149 Sum_probs=98.9
Q ss_pred CcHHHHHHHHHCC--CCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHc
Q psy6358 1822 NTDDCASYLINAD--ADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDN 1884 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~g--advn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~ 1884 (1945)
++.+++++|+++| ++++.+|..|+||||+|++.++.+++++||++|++++. ++.++|++||++
T Consensus 83 ~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 162 (228)
T 2dzn_A 83 GNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGL 162 (228)
T ss_dssp CCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred CCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 6899999999998 99999999999999999999999999999999999876 899999999999
Q ss_pred C-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHH-hCCCCCccchh
Q psy6358 1885 F-ANREITDHMDRLPRDVASERLHHDIVRLLD-EHIPRSPQMVS 1926 (1945)
Q Consensus 1885 G-ad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll-~~ga~~~~~~~ 1926 (1945)
| ++++.+|..|+||||+|+..++.++|++|+ ++|++......
T Consensus 163 g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~ 206 (228)
T 2dzn_A 163 GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDN 206 (228)
T ss_dssp TCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCT
T ss_pred CcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCC
Confidence 9 999999999999999999999999999999 89998765443
No 45
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.65 E-value=1.2e-16 Score=189.60 Aligned_cols=102 Identities=22% Similarity=0.205 Sum_probs=94.3
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC--------------------------------
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVN-------------------------------- 1869 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gad-------------------------------- 1869 (1945)
++.++|++||++|++++.+|..|+||||+|++.++.++|++||++|++
T Consensus 56 g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (282)
T 1oy3_D 56 GEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPN 135 (282)
T ss_dssp TCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------------------------
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccc
Confidence 799999999999999999999999999999999999999999998865
Q ss_pred ---------------CCC---------------CCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHcCcHHHHHHHHhCC
Q psy6358 1870 ---------------PRE---------------GSYGACKALLDNFANREITDHM-DRLPRDVASERLHHDIVRLLDEHI 1918 (1945)
Q Consensus 1870 ---------------vn~---------------g~~~~v~~LL~~Gad~~~~d~~-G~TpL~~A~~~g~~eiv~~Ll~~g 1918 (1945)
++. ++.++|++||++|++++.++.. |+||||+|++.++.++|++|+++|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 215 (282)
T 1oy3_D 136 PENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG 215 (282)
T ss_dssp --------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred cchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC
Confidence 222 8899999999999999999864 999999999999999999999999
Q ss_pred CCCcc
Q psy6358 1919 PRSPQ 1923 (1945)
Q Consensus 1919 a~~~~ 1923 (1945)
++...
T Consensus 216 ad~~~ 220 (282)
T 1oy3_D 216 ADPTA 220 (282)
T ss_dssp CCTTC
T ss_pred CCCcc
Confidence 87544
No 46
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.64 E-value=1.1e-16 Score=179.26 Aligned_cols=102 Identities=26% Similarity=0.241 Sum_probs=97.7
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFA 1886 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Ga 1886 (1945)
++.++|++||+.|++++.+|..|+||||+|++.++.++|++||++|++++. ++.++|++||++|+
T Consensus 46 g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 125 (192)
T 2rfm_A 46 GMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGA 125 (192)
T ss_dssp TCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Confidence 688999999999999999999999999999999999999999999999876 88999999999999
Q ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCcc
Q psy6358 1887 NREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1887 d~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
+++.+|..|+||||+|+..++.++|++|+++|++...
T Consensus 126 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 162 (192)
T 2rfm_A 126 NVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA 162 (192)
T ss_dssp CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 9999999999999999999999999999999987654
No 47
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.64 E-value=2.2e-16 Score=176.45 Aligned_cols=95 Identities=16% Similarity=0.157 Sum_probs=88.1
Q ss_pred HHHHHHHHHCCCCccccCCCCCCHHHHHHHcCC------HHHHHHHHHCCCCCCC----C-----------------CHH
Q psy6358 1824 DDCASYLINADADINVPDNSGKTALHWAAAVNN------IDAVNILLSHGVNPRE----G-----------------SYG 1876 (1945)
Q Consensus 1824 ~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~------~~iv~~LL~~Gadvn~----g-----------------~~~ 1876 (1945)
.++|++||++|||||.+|..|+||||+|+..++ .++|++||++||||++ | +.+
T Consensus 55 ~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~ 134 (186)
T 3t8k_A 55 YKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIP 134 (186)
T ss_dssp HHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHH
Confidence 569999999999999999999999999999987 6889999999999887 2 246
Q ss_pred HHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCC
Q psy6358 1877 ACKALLD-NFANREITDHMDRLPRDVASERLHHDIVRLLDEHI 1918 (1945)
Q Consensus 1877 ~v~~LL~-~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~g 1918 (1945)
+|++||+ +|||++++|..|+||||+|++.++.++|++|+++.
T Consensus 135 iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 135 LYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp HHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 8999999 99999999999999999999999999999999874
No 48
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.64 E-value=6.9e-17 Score=170.60 Aligned_cols=100 Identities=25% Similarity=0.318 Sum_probs=83.5
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFA 1886 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Ga 1886 (1945)
++.++|++||+.|++++.+|..|+||||+|++.++.++|++||++|++++. ++.++|++||++|+
T Consensus 21 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 100 (137)
T 3c5r_A 21 GDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGA 100 (137)
T ss_dssp TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 689999999999999999999999999999999999999999999988765 77888888888888
Q ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC
Q psy6358 1887 NREITDHMDRLPRDVASERLHHDIVRLLDEHIPRS 1921 (1945)
Q Consensus 1887 d~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 1921 (1945)
+++++|..|+||||+|+..++.+++++|.+..+.+
T Consensus 101 ~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s~ 135 (137)
T 3c5r_A 101 SRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESSS 135 (137)
T ss_dssp CTTCCCTTSCCGGGGCCCHHHHHHHSCC-------
T ss_pred CCCCCCCCCCCHHHHHhhccHHHHHhhccccccCC
Confidence 88888888888888888888888888777765443
No 49
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.64 E-value=2e-16 Score=182.57 Aligned_cols=102 Identities=17% Similarity=0.197 Sum_probs=92.5
Q ss_pred CcHHHHHHHHHCCCCccccCC-------------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------C
Q psy6358 1822 NTDDCASYLINADADINVPDN-------------SGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------G 1873 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~-------------~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g 1873 (1945)
++.++|++||++|++++.++. .|+||||+|+..++.++|++||++|++++. +
T Consensus 86 ~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~ 165 (232)
T 2rfa_A 86 QNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQP 165 (232)
T ss_dssp TCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCS
T ss_pred CCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 689999999999999999876 799999999999999999999999999876 7
Q ss_pred CHHHH----HHHHHcCCCC------CCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCcc
Q psy6358 1874 SYGAC----KALLDNFANR------EITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1874 ~~~~v----~~LL~~Gad~------~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
+.+++ ++||++|+++ +++|..|+||||+|++.++.++|++|+++|+....
T Consensus 166 ~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~ 225 (232)
T 2rfa_A 166 NKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAA 225 (232)
T ss_dssp CHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC--
T ss_pred ChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchh
Confidence 78877 9999999998 58999999999999999999999999999865443
No 50
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.64 E-value=2.8e-16 Score=171.37 Aligned_cols=104 Identities=28% Similarity=0.443 Sum_probs=94.2
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------- 1872 (1945)
||+|+.. ++.++|++||++|++++.+|..|+||||+|++.++.++|++||++|++++.
T Consensus 46 L~~A~~~-------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 118 (165)
T 3twr_A 46 LHFAAGY-------NRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAK 118 (165)
T ss_dssp HHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHc-------ChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHc
Confidence 6666655 689999999999999999999999999999999999999999999999875
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCC
Q psy6358 1873 GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIP 1919 (1945)
Q Consensus 1873 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga 1919 (1945)
++.++|++||++|++++.+|..|+||||+|++ ++.+|+++|+++||
T Consensus 119 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 119 GKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 88999999999999999999999999999876 88999999999886
No 51
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.64 E-value=1.3e-16 Score=187.27 Aligned_cols=101 Identities=23% Similarity=0.277 Sum_probs=94.9
Q ss_pred CcHHHHHHHHHCCCCccccCCC-------------CCCHHHHHHHcCCHHHHHHHHH---CCCCCCC-------------
Q psy6358 1822 NTDDCASYLINADADINVPDNS-------------GKTALHWAAAVNNIDAVNILLS---HGVNPRE------------- 1872 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~-------------G~T~Lh~Aa~~g~~~iv~~LL~---~Gadvn~------------- 1872 (1945)
++.++|++||++|++++.+|.. |+||||+|++.++.++|++||+ +|++++.
T Consensus 101 g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~ 180 (256)
T 2etb_A 101 RSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALV 180 (256)
T ss_dssp TCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHH
Confidence 7999999999999999999986 9999999999999999999999 9999876
Q ss_pred ----CCHH-------HHHHHHHcCCCC-------CCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCc
Q psy6358 1873 ----GSYG-------ACKALLDNFANR-------EITDHMDRLPRDVASERLHHDIVRLLDEHIPRSP 1922 (1945)
Q Consensus 1873 ----g~~~-------~v~~LL~~Gad~-------~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 1922 (1945)
++.+ +|++||++||++ +++|..|+||||+|++.++.+||++|+++|++..
T Consensus 181 ~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 181 MIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGA 248 (256)
T ss_dssp HHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC
Confidence 6677 999999999999 9999999999999999999999999999987543
No 52
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.64 E-value=6.5e-16 Score=184.77 Aligned_cols=107 Identities=22% Similarity=0.204 Sum_probs=80.6
Q ss_pred CCCcccc-----CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--------------CCH
Q psy6358 1815 EGRDCLI-----NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------GSY 1875 (1945)
Q Consensus 1815 ~g~tpL~-----~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------g~~ 1875 (1945)
.|+|||| ++.++|++||++|++++.+|..|+||||+|+..++.++|++||++|++++. ++.
T Consensus 91 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~ 170 (285)
T 3d9h_A 91 DHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHV 170 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCH
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 4555554 577788888888888888887888888888888888888888888777654 677
Q ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC
Q psy6358 1876 GACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRS 1921 (1945)
Q Consensus 1876 ~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 1921 (1945)
++|++||++|++++.+|..|+||||+|+..++.++|++|+++|++.
T Consensus 171 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 216 (285)
T 3d9h_A 171 ECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADV 216 (285)
T ss_dssp HHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCC
Confidence 7777777777777777777777777777777777777777777654
No 53
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.63 E-value=4.5e-16 Score=183.55 Aligned_cols=99 Identities=23% Similarity=0.229 Sum_probs=57.9
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--------------CCHHHHHHHHHcCCC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------GSYGACKALLDNFAN 1887 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------g~~~~v~~LL~~Gad 1887 (1945)
++.++|++||++|++++.+|..|+||||+|+..++.++|++||++|++++. ++.++|++||++|++
T Consensus 47 g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 126 (261)
T 2xai_A 47 GHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGN 126 (261)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 455666666666666666666666666666666666666666666655443 455555555555555
Q ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q psy6358 1888 REITDHMDRLPRDVASERLHHDIVRLLDEHIPR 1920 (1945)
Q Consensus 1888 ~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 1920 (1945)
++.+|..|+||||+|++.++.++|++|+++|++
T Consensus 127 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 159 (261)
T 2xai_A 127 IDHKISHLGTPLYLACENQQRACVKKLLESGAD 159 (261)
T ss_dssp TTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence 555555555555555555555555555555544
No 54
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.63 E-value=3e-16 Score=195.59 Aligned_cols=215 Identities=22% Similarity=0.523 Sum_probs=152.8
Q ss_pred cCCCeEEecCCCcccCCCCCCCCCCCCCCCCCCCeeccCCCCeeeeCCCCCccCccCCCCcccCCCCCCCCcccCCCCcC
Q psy6358 322 SVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAICDTNPIIN 401 (1945)
Q Consensus 322 ~~g~~~C~C~~Gy~G~~C~~~id~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~d~C~~~~C~~~~~C~~~~~~~ 401 (1945)
..|+|.|.|+.+|.++.++..+. +..+.+ .+.|.+.+..|+.= .. ...
T Consensus 135 ~nGs~~~~~p~~~~~~~~~~~~~---------~~~~~d-~g~y~~~~~~g~~~--------------------~~--~~~ 182 (423)
T 2gy5_A 135 KNGSFIHSVPRHEVPDILEVHLP---------HAQPQD-AGVYSARYIGGNLF--------------------TS--AFT 182 (423)
T ss_dssp ETTEEEEEECGGGCCSEEEEEET---------TCCGGG-CEEEEEEETTCCGG--------------------GC--EEE
T ss_pred cCCeEeeccCccccCCeEEeccC---------cCCCCC-CCeEeeEECCCcEe--------------------cc--ccc
Confidence 36789999999999987764432 123333 45677777666531 00 022
Q ss_pred CceeeecCCCCCCCCCCCCCccccCCccccccCCCCCCCCCCCCCeeeecCCceEEeeCCCccCCCcccCCCCCcCCCCc
Q psy6358 402 GSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSAC 481 (1945)
Q Consensus 402 g~~~C~C~~Gy~G~~C~~d~~eC~~g~~C~~~~~~C~~~~C~~~g~C~~~~g~y~C~C~~G~~G~~C~~~~d~C~~~~~C 481 (1945)
..+.|.|++||.|..|+. .| .||+++|+|.+ ++|+|.|++||+|..|+.+.
T Consensus 183 ~~~~c~C~~g~~G~~C~~----------------~C--~~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C--------- 233 (423)
T 2gy5_A 183 RLIVRRCEAQKWGPECNH----------------LC--TACMNNGVCHE--DTGECICPPGFMGRTCEKAC--------- 233 (423)
T ss_dssp EEEECSSCTTEESTTSCE----------------EC--CCCCTTCEECT--TTCCEECCTTEESTTSCEEC---------
T ss_pred cccCCcCCCCCCCCCCCC----------------CC--CCCCCCCEEEC--CCCcEeCCCCccCCCccccc---------
Confidence 457799999999988752 12 37999999987 57899999999999987532
Q ss_pred cccCCCCeeeeceeEEeecCccceecccCcccCCcccCCCCccc-CCCCCCCCccccccCCCCeeecCCCCcCCCccccc
Q psy6358 482 VRCLTPGMIVIRSWILVYRTERMVIDFGMKHIGSRCEGDINECL-SNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVK 560 (1945)
Q Consensus 482 ~~C~~~~~~~~~~~~c~c~~~~~~~~~~~g~~g~~C~~di~eC~-~~pC~~~~~~~C~~~~~~~~C~C~~G~~G~~C~~~ 560 (1945)
.+ ||.|..|. ++|. ..+|.++++ |. .++|+|.|++||+|..|+.
T Consensus 234 ------------------~~---------g~~g~~C~---~~C~~~~~C~~~g~--C~--~~~~~C~C~~G~~G~~C~~- 278 (423)
T 2gy5_A 234 ------------------EL---------HTFGRTCK---ERCSGQEGCKSYVF--CL--PDPYGCSCATGWKGLQCNE- 278 (423)
T ss_dssp ------------------CT---------TEESTTSC---EECCSTTTTTTCCE--EE--TTTTEEECCBTCBSGGGCB-
T ss_pred ------------------CC---------CCCCCCcC---ccCCCCCCCCCCCE--EC--CCCCeEEeCCCcccccccC-
Confidence 22 67777775 3666 357888877 74 5789999999999998873
Q ss_pred cccccccCCCCCCCCccceeeeeccccCCccccccccccCCCCeeccCCCCceeeCCCCCcccccccCCCCcCCCCCCCC
Q psy6358 561 DLAVKVTSMNASPTLAPLTVLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNG 640 (1945)
Q Consensus 561 ~~~~~i~~c~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~c~~g~C~~~~~~~~C~C~~Gy~G~~C~~~~~eC~~~pC~n~ 640 (1945)
.|++||+|..|+. .| +|.|+
T Consensus 279 ------------------------------------------------------~C~~G~~G~~C~~---~C---~C~ng 298 (423)
T 2gy5_A 279 ------------------------------------------------------ACHPGFYGPDCKL---RC---SCNNG 298 (423)
T ss_dssp ------------------------------------------------------CCCTTBCSBTTCC---BC---CCTTC
T ss_pred ------------------------------------------------------ccCCCCcCCcccc---cc---cCCCC
Confidence 2678999998863 34 89999
Q ss_pred CEeeecCCCceEEeCCCCccCCCcccCCCCcccCCCCCCCCeeeeCCCCeeeeccCCcCCCCCCC
Q psy6358 641 GFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCDL 705 (1945)
Q Consensus 641 g~C~~~~~~~y~C~C~~G~~G~~Ce~~~~~~C~~~pC~~~~~C~~~~~~y~C~C~~G~~G~~C~~ 705 (1945)
|+|.+.. .|.|++||+|.+||.. ... ...| ...+ .. -.|.|.+||.|..|+.
T Consensus 299 g~C~~~~----~C~C~~G~~G~~Ce~~-~~~-~~~~-----~~~~-~~-~~~~c~~g~~g~~C~~ 350 (423)
T 2gy5_A 299 EMCDRFQ----GCLCSPGWQGLQCERE-GIP-RMTP-----KIVD-LP-DHIEVNSGKFNPICKA 350 (423)
T ss_dssp CEEETTT----EEECCTTCBSTTSCBC-SSC-CCCC-----EECS-CC-SBCCEESEEECCEEEE
T ss_pred CEecCCC----ceECCCCCcCCCCccC-ccC-CcCc-----ceec-CC-CeEEeCCCccCCcccc
Confidence 9998765 4999999999999954 222 1122 1111 12 2488999999987764
No 55
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.63 E-value=1.2e-16 Score=186.06 Aligned_cols=102 Identities=23% Similarity=0.217 Sum_probs=96.2
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFA 1886 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Ga 1886 (1945)
++.++|++||+.|+++|.+|..|+||||+|+..|+.++|++||++|++++. ++.++|++||++||
T Consensus 48 g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 127 (239)
T 1ycs_B 48 GEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGA 127 (239)
T ss_dssp TCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 799999999999999999999999999999999999999999999999876 89999999999999
Q ss_pred CCCCcCCCCC-CHHHHH--HHcCcHHHHHHHHhCCCCCcc
Q psy6358 1887 NREITDHMDR-LPRDVA--SERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1887 d~~~~d~~G~-TpL~~A--~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
+++.++..|. ||||+| +..++.++|++|++++++...
T Consensus 128 ~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~ 167 (239)
T 1ycs_B 128 AVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGI 167 (239)
T ss_dssp CTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTT
T ss_pred CcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccc
Confidence 9999998887 999999 788999999999999876554
No 56
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.63 E-value=2.4e-16 Score=182.56 Aligned_cols=109 Identities=18% Similarity=0.164 Sum_probs=100.3
Q ss_pred CCCcccc-----CcHHHHHHHHHCCCC------ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----------
Q psy6358 1815 EGRDCLI-----NTDDCASYLINADAD------INVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE----------- 1872 (1945)
Q Consensus 1815 ~g~tpL~-----~~~~~v~~Ll~~gad------vn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~----------- 1872 (1945)
.|+|||| ++.++|++|++.+++ ++.+|..|+||||+|++.++.++|++||++|++++.
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~ 156 (236)
T 1ikn_D 77 RGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALH 156 (236)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Confidence 5666665 689999999999986 678889999999999999999999999999999865
Q ss_pred -----CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCcc
Q psy6358 1873 -----GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1873 -----g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
++.++|++||++||+++.+|..|+||||+|+.+++.+||++|+++|+++..
T Consensus 157 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 212 (236)
T 1ikn_D 157 LAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQ 212 (236)
T ss_dssp HHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGS
T ss_pred HHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhh
Confidence 789999999999999999999999999999999999999999999997653
No 57
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.63 E-value=3.4e-16 Score=198.78 Aligned_cols=108 Identities=26% Similarity=0.345 Sum_probs=88.3
Q ss_pred CCCcccc-----CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CC
Q psy6358 1815 EGRDCLI-----NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GS 1874 (1945)
Q Consensus 1815 ~g~tpL~-----~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~ 1874 (1945)
.|+|||| ++.++|++||++|++++.+|..|+||||+|++.++.+++++||++|++++. ++
T Consensus 244 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~ 323 (437)
T 1n11_A 244 QGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGN 323 (437)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCc
Confidence 4666765 578888888888888888888888888888888888888888888888765 77
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCc
Q psy6358 1875 YGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSP 1922 (1945)
Q Consensus 1875 ~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 1922 (1945)
.++|++||++||+++.+|..|+||||+|+.+++.+||++|+++|+++.
T Consensus 324 ~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~ 371 (437)
T 1n11_A 324 IKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPN 371 (437)
T ss_dssp SHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCC
Confidence 788888888888888888888888888888888888888888887654
No 58
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.63 E-value=9.8e-16 Score=165.26 Aligned_cols=95 Identities=26% Similarity=0.367 Sum_probs=92.0
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFA 1886 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Ga 1886 (1945)
++.++|++||++|++++.+|..|+||||+|++.++.++|++||++|++++. ++.++|++||++ +
T Consensus 46 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~ 124 (156)
T 1bd8_A 46 GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-S 124 (156)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-S
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-c
Confidence 689999999999999999999999999999999999999999999999876 889999999999 9
Q ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhC
Q psy6358 1887 NREITDHMDRLPRDVASERLHHDIVRLLDEH 1917 (1945)
Q Consensus 1887 d~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ 1917 (1945)
+++.+|..|+||||+|++.++.++|++|+++
T Consensus 125 ~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 125 DLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999999999999999999999999986
No 59
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.63 E-value=8.5e-16 Score=184.34 Aligned_cols=103 Identities=26% Similarity=0.344 Sum_probs=84.4
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----------------------------
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE----------------------------- 1872 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~----------------------------- 1872 (1945)
++.++|++||++|++++.+|..|+||||+|+..|+.++|++||++|++++.
T Consensus 84 g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~ 163 (299)
T 1s70_B 84 DNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQG 163 (299)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcC
Confidence 566777777777777777777777777777777777777777777766431
Q ss_pred ----------------------------------------------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Q psy6358 1873 ----------------------------------------------GSYGACKALLDNFANREITDHMDRLPRDVASERL 1906 (1945)
Q Consensus 1873 ----------------------------------------------g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g 1906 (1945)
++.++|++||++|++++.+|..|+||||+|+..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~ 243 (299)
T 1s70_B 164 VDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWG 243 (299)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred CCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcC
Confidence 6789999999999999999999999999999999
Q ss_pred cHHHHHHHHhCCCCCccc
Q psy6358 1907 HHDIVRLLDEHIPRSPQM 1924 (1945)
Q Consensus 1907 ~~eiv~~Ll~~ga~~~~~ 1924 (1945)
+.++|++|+++|++....
T Consensus 244 ~~~~v~~Ll~~gad~~~~ 261 (299)
T 1s70_B 244 KEEACRILVENLCDMEAV 261 (299)
T ss_dssp CHHHHHHHHHTTCCTTCC
T ss_pred CHHHHHHHHHcCCCCCCc
Confidence 999999999999886553
No 60
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.63 E-value=1.5e-16 Score=183.26 Aligned_cols=99 Identities=26% Similarity=0.266 Sum_probs=95.2
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFA 1886 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Ga 1886 (1945)
++.+++++|+++|++++.+|..|+||||+|+..++.++|++||++|++++. ++.++|++||++||
T Consensus 117 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 196 (231)
T 3aji_A 117 NRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGA 196 (231)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCC
Confidence 689999999999999999999999999999999999999999999999876 88999999999999
Q ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q psy6358 1887 NREITDHMDRLPRDVASERLHHDIVRLLDEHIPR 1920 (1945)
Q Consensus 1887 d~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 1920 (1945)
+++++|..|+||||+|++.++.+|+++|++++++
T Consensus 197 ~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 197 SIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp CSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 9999999999999999999999999999998764
No 61
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.63 E-value=2.4e-16 Score=169.77 Aligned_cols=99 Identities=25% Similarity=0.310 Sum_probs=59.4
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFA 1886 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Ga 1886 (1945)
++.++|++||+.|++++ +|..|+||||+|+..++.++|++||++|++++. ++.++|++||++|+
T Consensus 13 g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 91 (153)
T 1awc_B 13 GQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGA 91 (153)
T ss_dssp TCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCC
Confidence 45566666666666554 355566666666666666666666666655543 55566666666666
Q ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC
Q psy6358 1887 NREITDHMDRLPRDVASERLHHDIVRLLDEHIPRS 1921 (1945)
Q Consensus 1887 d~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 1921 (1945)
+++.+|..|+||||+|+..++.++|++|+++|++.
T Consensus 92 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 126 (153)
T 1awc_B 92 DVNAKDMLKMTALHWATEHNHQEVVELLIKYGADV 126 (153)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 66666666666666666666666666666665543
No 62
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.63 E-value=4.9e-16 Score=179.98 Aligned_cols=103 Identities=25% Similarity=0.252 Sum_probs=96.2
Q ss_pred CcHHHHHHHHHCCC----CccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC----------------CCHHHHHHH
Q psy6358 1822 NTDDCASYLINADA----DINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE----------------GSYGACKAL 1881 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~ga----dvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~----------------g~~~~v~~L 1881 (1945)
++.+++++|++.++ +++.+|..|+||||+|++.++.+++++||++|++++. ++.++|++|
T Consensus 90 ~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 169 (241)
T 1k1a_A 90 RSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLL 169 (241)
T ss_dssp TCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHH
Confidence 68999999999987 8999999999999999999999999999999999764 889999999
Q ss_pred HHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCccc
Q psy6358 1882 LDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQM 1924 (1945)
Q Consensus 1882 L~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~~ 1924 (1945)
|++|++++.+|..|+||||+|+..++.++|++|+++|++....
T Consensus 170 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 212 (241)
T 1k1a_A 170 LQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLK 212 (241)
T ss_dssp HHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCc
Confidence 9999999999999999999999999999999999999886553
No 63
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.62 E-value=1.1e-15 Score=164.65 Aligned_cols=100 Identities=19% Similarity=0.272 Sum_probs=94.8
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------- 1872 (1945)
||+|+.. ++.++|++||+.|++++.+|..|+||||+|++.++.++|++||++|++++.
T Consensus 38 L~~A~~~-------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 110 (153)
T 1awc_B 38 LHLAAQY-------GHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEH 110 (153)
T ss_dssp HHHHHHH-------TCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHc-------CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 6666655 789999999999999999999999999999999999999999999999876
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHH
Q psy6358 1873 GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 1914 (1945)
Q Consensus 1873 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~L 1914 (1945)
++.++|++||++|++++.+|..|+||||+|+..++.+|+++|
T Consensus 111 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 111 NHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 889999999999999999999999999999999999999998
No 64
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.62 E-value=4.7e-16 Score=172.23 Aligned_cols=102 Identities=18% Similarity=0.234 Sum_probs=97.2
Q ss_pred CcHHHHHHHHHC-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcC
Q psy6358 1822 NTDDCASYLINA-DADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNF 1885 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~-gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~G 1885 (1945)
++.++|++||+. +.+++.+|..|+||||+|++.++.++|++||++|++++. ++.++|++||++|
T Consensus 16 g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 95 (179)
T 3f6q_A 16 GNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYK 95 (179)
T ss_dssp TCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 799999999998 788999999999999999999999999999999999876 8999999999999
Q ss_pred CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCcc
Q psy6358 1886 ANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1886 ad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
++++.+|..|+||||+|+..++.++|++|+++|++...
T Consensus 96 ~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 133 (179)
T 3f6q_A 96 ADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI 133 (179)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB
T ss_pred CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch
Confidence 99999999999999999999999999999999987644
No 65
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.62 E-value=5.7e-16 Score=198.67 Aligned_cols=140 Identities=31% Similarity=0.751 Sum_probs=111.4
Q ss_pred cCCCCCCCCCCCCCeecCCCC-ceee-ecCCCCCC--CcCccCCCccCCCCCCCCCCC---eeeccCCCeEEe-cCCCcc
Q psy6358 264 NIDDCPGNLCQNGATCMDGIN-KYSC-LCLATYTG--DLCEQDVDECSIRPSVCHNGA---TCTNSVGGFSCI-CVNGWT 335 (1945)
Q Consensus 264 ~~d~C~~~~C~~~~~C~~~~~-~y~C-~C~~G~~G--~~C~~d~deC~~~~~~C~~~~---~C~n~~g~~~C~-C~~Gy~ 335 (1945)
+|++|..+||.++++|+++.+ +|+| .|++||+| ..|+ +|+||...++.|.+++ +|+|+.++|+|. |++||+
T Consensus 2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~Ce-DiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~ 80 (634)
T 1yo8_A 2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYR 80 (634)
T ss_dssp --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCC-BCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEE
T ss_pred cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCcc-ccccccCCCCcccCCccccceeeccCceecccCCCCcc
Confidence 678898899999999998875 4999 89999998 5885 8999988777799988 899999999998 999999
Q ss_pred cCCCC--------------CCCCCCCC--CCCCCCCeeccCC----CCeeeeCCCCCcc--CccC---CCCcccCCCCCC
Q psy6358 336 GPDCS--------------LNIDDCAG--AACFNGATCIDRV----GSFYCQCTPGKTG--LLCH---LEDACTSNPCHA 390 (1945)
Q Consensus 336 G~~C~--------------~~id~C~~--~~C~~~~~C~~~~----g~~~C~C~~G~~G--~~C~---~~d~C~~~~C~~ 390 (1945)
|..|+ ++|++|.. .+|.++++|+++. ++|+|.|++||+| ..|+ ++++|...
T Consensus 81 G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~d~DiDeC~~~---- 156 (634)
T 1yo8_A 81 GNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNL---- 156 (634)
T ss_dssp ECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEEECTTSSSSCSS----
T ss_pred cCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccCcccccccCcccccCC----
Confidence 88764 57899985 4899999999988 8999999999986 7897 56887532
Q ss_pred CCcccCCCCcCCceeee---cCCCC
Q psy6358 391 DAICDTNPIINGSYTCS---CASGY 412 (1945)
Q Consensus 391 ~~~C~~~~~~~g~~~C~---C~~Gy 412 (1945)
...|.. +++|.|. |+.++
T Consensus 157 ~~~C~~----~~~y~C~~dnC~~~p 177 (634)
T 1yo8_A 157 NLVCAT----NATYHCIKDNCPHLP 177 (634)
T ss_dssp CCTTTT----TCSSSCSCCSSTTSC
T ss_pred CCcccC----CCCcccccccccccc
Confidence 233432 2466666 77654
No 66
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.62 E-value=1.3e-15 Score=176.15 Aligned_cols=103 Identities=22% Similarity=0.327 Sum_probs=97.5
Q ss_pred CcHHHHHHHHHCC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcC
Q psy6358 1822 NTDDCASYLINAD-ADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNF 1885 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~g-advn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~G 1885 (1945)
++.+++++|++.+ ++++.+|..|+||||+|++.++.+++++||++|++++. ++.+++++||++|
T Consensus 88 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 167 (237)
T 3b7b_A 88 GHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAK 167 (237)
T ss_dssp TCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTT
T ss_pred CCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 6899999999998 89999999999999999999999999999999999876 8899999999999
Q ss_pred CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCccc
Q psy6358 1886 ANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQM 1924 (1945)
Q Consensus 1886 ad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~~ 1924 (1945)
++++.+|..|+||||+|+..++.++|++|+++|++....
T Consensus 168 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~ 206 (237)
T 3b7b_A 168 CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLK 206 (237)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC
T ss_pred CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCcc
Confidence 999999999999999999999999999999999886543
No 67
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.62 E-value=3.4e-17 Score=178.69 Aligned_cols=136 Identities=27% Similarity=0.689 Sum_probs=99.1
Q ss_pred cCCCccCCCCCCCCCCCeeeccCCCeEEecCCCcc----cCCCCCCCCC--CCCC--CC--CCCCeeccCCC----Ceee
Q psy6358 301 QDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWT----GPDCSLNIDD--CAGA--AC--FNGATCIDRVG----SFYC 366 (1945)
Q Consensus 301 ~d~deC~~~~~~C~~~~~C~n~~g~~~C~C~~Gy~----G~~C~~~id~--C~~~--~C--~~~~~C~~~~g----~~~C 366 (1945)
+|||||+. +++|. +++|+|++|+|+|.|++||+ |..|+ +|++ |... +| .++++|++..+ +|+|
T Consensus 1 ~dideC~~-~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C 77 (162)
T 1uzk_A 1 TDVNECLD-PTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV-DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASC 77 (162)
T ss_dssp CCCCGGGS-TTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEE-CCCCEEEEEEC----------CEEEEEEEECHHHH
T ss_pred CccccCCC-CCCCC-CCEeECCCCCEEEeCCCCCeECCCCCccc-CCCCCcccCCCcccCCCCCCcccCCcCCcccCcee
Confidence 47899974 46797 58999999999999999998 77886 7776 7653 34 36789998877 8999
Q ss_pred eCCCCCc-cCccCCCCcccCCCCCCCCcccCCCCcCCceeeecCC--CCCCCC---CCCCCccccCCccccccCCCCCCC
Q psy6358 367 QCTPGKT-GLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCAS--GYKGVN---CSEDINECEQGINCEINIDDCAFK 440 (1945)
Q Consensus 367 ~C~~G~~-G~~C~~~d~C~~~~C~~~~~C~~~~~~~g~~~C~C~~--Gy~G~~---C~~d~~eC~~g~~C~~~~~~C~~~ 440 (1945)
.|++||. |..|+ +|... ..++|+|.|++ ||+|.. +.+|||||... .+
T Consensus 78 ~C~~G~~~~~~C~--------------~C~~~--~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~-----------~~ 130 (162)
T 1uzk_A 78 CCSLGKAWGTPCE--------------MCPAV--NTSEYKILCPGGEGFRPNPITVILEDIDECQEL-----------PG 130 (162)
T ss_dssp HTTTCCEETTTTE--------------ECCCT--TSHHHHHHCTTCTTEEECTTTCCEEECCHHHHC-----------GG
T ss_pred eCCCCCCcCCCcc--------------cCCCC--CCCCceeECCCCCCcccCCCCCccCccccccCC-----------CC
Confidence 9999998 55554 24332 24789999998 999852 22344444321 35
Q ss_pred CCCCCCeeeecCCceEEeeCCCccCCC
Q psy6358 441 PCRHGGTCIDLVNAYKCVCQVPYTGHD 467 (1945)
Q Consensus 441 ~C~~~g~C~~~~g~y~C~C~~G~~G~~ 467 (1945)
+|+| |+|+|++|+|+|.|++||+|..
T Consensus 131 ~C~~-g~C~n~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 131 LCQG-GKCINTFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp GGBT-SEEEECSSCEEEECCTTCCBCT
T ss_pred CcCC-CEeEcCCCCEEeeCCCCccCCC
Confidence 6986 7999999999999999999864
No 68
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.61 E-value=6e-16 Score=167.93 Aligned_cols=106 Identities=25% Similarity=0.334 Sum_probs=99.9
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------- 1872 (1945)
||.|+.. ++.++|++||++|++++.+|..|+||||+|+. ++.++|++||++|++++.
T Consensus 9 L~~A~~~-------g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 9 LASAAAR-------GDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARA 80 (162)
T ss_dssp HHHHHHH-------TCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHc-------CCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 5666655 79999999999999999999999999999999 999999999999999876
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC
Q psy6358 1873 GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRS 1921 (1945)
Q Consensus 1873 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 1921 (1945)
++.++|++||++|++++.+|..|+||||+|+..++.++|++|+++|++.
T Consensus 81 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 129 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129 (162)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCC
Confidence 8899999999999999999999999999999999999999999999875
No 69
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.61 E-value=5.5e-16 Score=174.48 Aligned_cols=97 Identities=27% Similarity=0.352 Sum_probs=67.1
Q ss_pred CcHHHHHHHH-HCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCC---------------CC-----HHHHH
Q psy6358 1822 NTDDCASYLI-NADADINVPDNSGKTALHWAAAVNNIDAVNILLSHG-VNPRE---------------GS-----YGACK 1879 (1945)
Q Consensus 1822 ~~~~~v~~Ll-~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~G-advn~---------------g~-----~~~v~ 1879 (1945)
++.+++++|| ..+++++.+|..|+||||+|++.++.++|++||++| ++++. ++ .++|+
T Consensus 83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~ 162 (201)
T 3hra_A 83 GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVK 162 (201)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHH
T ss_pred CCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHH
Confidence 5667777777 456677777777777777777777777777777776 66544 33 66777
Q ss_pred HHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCC
Q psy6358 1880 ALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHI 1918 (1945)
Q Consensus 1880 ~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~g 1918 (1945)
+||++||+++.+|..|+||||+|+++++.++|++|+++|
T Consensus 163 ~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 163 LLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 777777777777777777777777777777777777665
No 70
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.61 E-value=9.5e-16 Score=196.59 Aligned_cols=139 Identities=28% Similarity=0.690 Sum_probs=116.5
Q ss_pred ccCCcCCCCCCCCCcEEeecCCC-eEE-ecCCCCCC--CCCCCCCCCCCCCC--CCCCC---eeccCCCCCCeeee-cCC
Q psy6358 865 INIDDCAFKPCRHGGTCIDLVNA-YKC-VCQVPYTG--HDCHQKLDPCVPNR--CQHGA---RCTPSANFQDFACH-CGV 934 (1945)
Q Consensus 865 ~~ideC~~~pC~~~g~C~~~~~~-y~C-~C~~G~~G--~~C~~~~~~C~~~~--C~~g~---~C~~~~~~~~~~C~-C~~ 934 (1945)
+|||||.++||+++++|+++.++ |+| .|++||+| ..|+ ++++|..+| |.+++ +|++. .++|+|. |++
T Consensus 1 ~DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~Ce-DiDEC~~~p~~C~~gg~~~~CvNt--~gsY~C~~C~~ 77 (634)
T 1yo8_A 1 ADPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDECALVPDICFSTSKVPRCVNT--QPGFHCLPCPP 77 (634)
T ss_dssp ---CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCC-BCCTTTTSCCCSCCCSSSCCEEEC--SSSEEECCCCT
T ss_pred CcccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCcc-ccccccCCCCcccCCccccceeec--cCceecccCCC
Confidence 47999999999999999999865 999 99999998 7897 899999888 99999 99976 4699999 999
Q ss_pred CCccCCCC--------------ccCcccCC-CCCCCCCCeeeeCC----CCeEeeCCCCccc--CCcc--cCCCCCCC--
Q psy6358 935 GWTGRYCN--------------EDVDECQL-SSPCRNGATCHNTN----GSYLCECAKGYEG--RDCL--INTDDCAS-- 989 (1945)
Q Consensus 935 G~~G~~C~--------------~dideC~~-~~~C~~~~~C~n~~----gsy~C~C~~Gy~G--~~C~--~~~d~C~~-- 989 (1945)
||+|..|+ ++|+||.. .++|.++++|+++. ++|+|.|++||+| ..|+ +++++|..
T Consensus 78 Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~d~DiDeC~~~~ 157 (634)
T 1yo8_A 78 RYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNLN 157 (634)
T ss_dssp TEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEEECTTSSSSCSSC
T ss_pred CcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccCcccccccCcccccCCC
Confidence 99998864 68999985 47999999999999 9999999999998 7897 47888864
Q ss_pred CCCCCCCEEecCCCCeEEe---cCCCC
Q psy6358 990 FPCQNGGTCLDEVGDYSCL---CVDGF 1013 (1945)
Q Consensus 990 ~~C~n~g~C~~~~g~y~C~---C~~Gy 1013 (1945)
.+|..+ ++|.|. |+.++
T Consensus 158 ~~C~~~-------~~y~C~~dnC~~~p 177 (634)
T 1yo8_A 158 LVCATN-------ATYHCIKDNCPHLP 177 (634)
T ss_dssp CTTTTT-------CSSSCSCCSSTTSC
T ss_pred CcccCC-------CCcccccccccccc
Confidence 345422 467776 77654
No 71
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.61 E-value=3.2e-16 Score=172.11 Aligned_cols=109 Identities=24% Similarity=0.246 Sum_probs=101.4
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADAD-INVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE-------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gad-vn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~-------------- 1872 (1945)
||.|+.. ++.++|++||+.+++ ++.+|..|+||||+|++.++.++|++||++|++++.
T Consensus 6 L~~A~~~-------g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 78 (172)
T 3v30_A 6 IHQLAAQ-------GELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLAST 78 (172)
T ss_dssp HHHHHHT-------TCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHc-------CCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHH
Confidence 6666665 789999999999887 899999999999999999999999999999999876
Q ss_pred -CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCcc
Q psy6358 1873 -GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1873 -g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
++.++|++||++|++++.+|..|+||||+|+..++.++|++|+++|++...
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 130 (172)
T 3v30_A 79 GGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT 130 (172)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 899999999999999999999999999999999999999999999987644
No 72
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.61 E-value=4.7e-16 Score=197.43 Aligned_cols=108 Identities=26% Similarity=0.269 Sum_probs=101.3
Q ss_pred CCCcccc-----CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CC
Q psy6358 1815 EGRDCLI-----NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GS 1874 (1945)
Q Consensus 1815 ~g~tpL~-----~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~ 1874 (1945)
.|+|||| ++.+++++|++.|++++.++..|+||||+|+..++.++|++||++|++++. ++
T Consensus 211 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~ 290 (437)
T 1n11_A 211 NGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGH 290 (437)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 4677875 689999999999999999999999999999999999999999999999775 88
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCc
Q psy6358 1875 YGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSP 1922 (1945)
Q Consensus 1875 ~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 1922 (1945)
.+++++||++|++++.+|..|+||||+|+..++.++|++|+++|++..
T Consensus 291 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n 338 (437)
T 1n11_A 291 VPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVN 338 (437)
T ss_dssp HHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTT
T ss_pred HHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCC
Confidence 999999999999999999999999999999999999999999998754
No 73
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.61 E-value=1.6e-15 Score=179.83 Aligned_cols=103 Identities=23% Similarity=0.244 Sum_probs=97.1
Q ss_pred CcHHHHHHHHHC-CCCccccCCCCCCHHHHHHHcCC----HHHHHHHHHCCCCCCC---------------CCHHHHHHH
Q psy6358 1822 NTDDCASYLINA-DADINVPDNSGKTALHWAAAVNN----IDAVNILLSHGVNPRE---------------GSYGACKAL 1881 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~-gadvn~~d~~G~T~Lh~Aa~~g~----~~iv~~LL~~Gadvn~---------------g~~~~v~~L 1881 (1945)
++.++|++||+. |++++.+|..|+||||+|+..++ .+++++|+++|++++. ++.++|++|
T Consensus 159 ~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 238 (285)
T 1wdy_A 159 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 238 (285)
T ss_dssp TCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 689999999988 99999999999999999999999 9999999999999876 889999999
Q ss_pred HH-cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCccc
Q psy6358 1882 LD-NFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQM 1924 (1945)
Q Consensus 1882 L~-~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~~ 1924 (1945)
|+ +|++++.+|..|+||||+|++.++.+||++|+++|++....
T Consensus 239 l~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~ 282 (285)
T 1wdy_A 239 LEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282 (285)
T ss_dssp HHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCS
T ss_pred HhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcc
Confidence 99 89999999999999999999999999999999999987653
No 74
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.61 E-value=1.4e-15 Score=182.02 Aligned_cols=108 Identities=19% Similarity=0.218 Sum_probs=94.1
Q ss_pred CCCcccc-----CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CC
Q psy6358 1815 EGRDCLI-----NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GS 1874 (1945)
Q Consensus 1815 ~g~tpL~-----~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~ 1874 (1945)
.|+|||| ++.++|++||++|++++..+ .|+||||+|++.++.++|++||++|++++. ++
T Consensus 124 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~ 202 (285)
T 3d9h_A 124 DWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ 202 (285)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 4455554 68899999999999998755 499999999999999999999999999875 88
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCccc
Q psy6358 1875 YGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQM 1924 (1945)
Q Consensus 1875 ~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~~ 1924 (1945)
.++|++||++|++++. |..|+||||+|+..++.++|++|+++|++....
T Consensus 203 ~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~ 251 (285)
T 3d9h_A 203 RACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAK 251 (285)
T ss_dssp HHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 9999999999999995 889999999999999999999999999876543
No 75
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.60 E-value=1.5e-15 Score=180.79 Aligned_cols=97 Identities=20% Similarity=0.182 Sum_probs=90.7
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHH-cC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLD-NF 1885 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~-~G 1885 (1945)
++.++|++|++.|++++.+|..|+||||+|+..|+.++|++||++||+++. ++.++|++||+ +|
T Consensus 161 ~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g 240 (276)
T 4hbd_A 161 DDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPS 240 (276)
T ss_dssp HHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTT
T ss_pred hhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCC
Confidence 578999999999999999999999999999999999999999999999876 88999999999 89
Q ss_pred CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCC
Q psy6358 1886 ANREITDHMDRLPRDVASERLHHDIVRLLDEHI 1918 (1945)
Q Consensus 1886 ad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~g 1918 (1945)
|+++++|..|+||||+|+..++.+||++|+++.
T Consensus 241 ad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 241 CDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 999999999999999999999999999999875
No 76
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.60 E-value=1.7e-15 Score=178.53 Aligned_cols=98 Identities=18% Similarity=0.184 Sum_probs=53.6
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--------------CCHHHHHHHHHcCCC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------GSYGACKALLDNFAN 1887 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------g~~~~v~~LL~~Gad 1887 (1945)
++.++|++||++|++++.+|..|+||||+|++.++.++|++||++|++++. ++.++|++||++|||
T Consensus 112 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad 191 (261)
T 2xai_A 112 GHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGAD 191 (261)
T ss_dssp TCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHcCCHHHHHHHHHcCCC
Confidence 455555555555555555555555555555555555555555555555543 455555555555555
Q ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC
Q psy6358 1888 REITDHMDRLPRDVASERLHHDIVRLLDEHIPRS 1921 (1945)
Q Consensus 1888 ~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 1921 (1945)
++++|..|+||||+|+.++ +++++|+++++..
T Consensus 192 ~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~ 223 (261)
T 2xai_A 192 TQAKNAEGKRPVELVPPES--PLAQLFLEREGPP 223 (261)
T ss_dssp TTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCC
T ss_pred CCCcCCCCCChhhhccccc--cHHHHHHhccCCc
Confidence 5555555555555555332 3555555554443
No 77
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.60 E-value=1e-15 Score=187.33 Aligned_cols=100 Identities=24% Similarity=0.271 Sum_probs=68.5
Q ss_pred CcHHHHHHHHH-CCCCccccCCCCCCHHHHHHHcCC----HHHHHHHHHCCCCCCC---------------CCHHHHHHH
Q psy6358 1822 NTDDCASYLIN-ADADINVPDNSGKTALHWAAAVNN----IDAVNILLSHGVNPRE---------------GSYGACKAL 1881 (1945)
Q Consensus 1822 ~~~~~v~~Ll~-~gadvn~~d~~G~T~Lh~Aa~~g~----~~iv~~LL~~Gadvn~---------------g~~~~v~~L 1881 (1945)
++.++|++||+ .|+|||.+|..|+|+||+|+..++ .+++++||++||+++. ++.++|++|
T Consensus 179 g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~L 258 (337)
T 4g8k_A 179 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 258 (337)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHH
Confidence 56777777774 477777777777777776665442 3566777777777664 666777777
Q ss_pred HHc-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC
Q psy6358 1882 LDN-FANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRS 1921 (1945)
Q Consensus 1882 L~~-Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 1921 (1945)
|++ |++++.+|..|+||||+|++.|+.+||++||++||+.
T Consensus 259 l~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~ 299 (337)
T 4g8k_A 259 LEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 299 (337)
T ss_dssp HTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSS
T ss_pred HHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 764 6777777777777777777777777777777777654
No 78
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.60 E-value=1.7e-15 Score=165.10 Aligned_cols=111 Identities=22% Similarity=0.244 Sum_probs=101.0
Q ss_pred eeeecccCCCccccCcHHHHHHHHH-CCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLIN-ADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE-------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~-~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~-------------- 1872 (1945)
||.|+.. ++.++|+.||+ .+.+++.++..|+||||+|++.++.++|++||++|++++.
T Consensus 12 l~~A~~~-------g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 12 LLEAAKA-------GDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp HHHHHHH-------TCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHh-------CCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 5555554 78999999998 5678899999999999999999999999999999999876
Q ss_pred -CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCccch
Q psy6358 1873 -GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQMV 1925 (1945)
Q Consensus 1873 -g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~~~ 1925 (1945)
++.++|++||++|++++.+|..|+||||+|+..++.++|++|+++|++.....
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 138 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKN 138 (165)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC
Confidence 89999999999999999999999999999999999999999999998866543
No 79
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.60 E-value=6.4e-16 Score=192.30 Aligned_cols=108 Identities=21% Similarity=0.220 Sum_probs=97.2
Q ss_pred CCCcccc-----CcHHH--------HHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------
Q psy6358 1815 EGRDCLI-----NTDDC--------ASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------- 1872 (1945)
Q Consensus 1815 ~g~tpL~-----~~~~~--------v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------- 1872 (1945)
.|+|||| ++.++ ++.||+.|+++|.+|..|+||||+|+..|+.++|++||++||+++.
T Consensus 124 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L 203 (373)
T 2fo1_E 124 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSAL 203 (373)
T ss_dssp SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHH
Confidence 5889996 34444 4455689999999999999999999999999999999999999876
Q ss_pred ------CCHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHcC---cHHHHHHHHhCCCCCc
Q psy6358 1873 ------GSYGACKALLDNF---ANREITDHMDRLPRDVASERL---HHDIVRLLDEHIPRSP 1922 (1945)
Q Consensus 1873 ------g~~~~v~~LL~~G---ad~~~~d~~G~TpL~~A~~~g---~~eiv~~Ll~~ga~~~ 1922 (1945)
++.++|++||+++ ++++.+|..|+||||+|+..+ +.++|++|+++|++..
T Consensus 204 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~ 265 (373)
T 2fo1_E 204 HQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVD 265 (373)
T ss_dssp HHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSS
T ss_pred HHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcc
Confidence 8999999999998 899999999999999999988 8999999999998754
No 80
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.59 E-value=6.5e-16 Score=181.62 Aligned_cols=109 Identities=17% Similarity=0.121 Sum_probs=99.0
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccC--------------CCCCCHHHHHHHcCCHHHHHHHHH---CCCCC
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPD--------------NSGKTALHWAAAVNNIDAVNILLS---HGVNP 1870 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d--------------~~G~T~Lh~Aa~~g~~~iv~~LL~---~Gadv 1870 (1945)
||+|+.. ++.++|++||++|++++.+| ..|+||||+|+..++.++|++||+ +|+++
T Consensus 97 L~~A~~~-------g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~ 169 (260)
T 3jxi_A 97 LHIAIER-------RCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADL 169 (260)
T ss_dssp HHHHHHT-------TCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT
T ss_pred HHHHHHc-------CCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCC
Confidence 6666554 78999999999999999999 689999999999999999999999 99998
Q ss_pred CC---------------CC---------HHHHHHHHHcCCCC-------CCcCCCCCCHHHHHHHcCcHHHHHHHHhCCC
Q psy6358 1871 RE---------------GS---------YGACKALLDNFANR-------EITDHMDRLPRDVASERLHHDIVRLLDEHIP 1919 (1945)
Q Consensus 1871 n~---------------g~---------~~~v~~LL~~Gad~-------~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga 1919 (1945)
+. ++ .++|++||++||++ +++|..|+||||+|++.++.+||++||++|+
T Consensus 170 ~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 249 (260)
T 3jxi_A 170 RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREI 249 (260)
T ss_dssp TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 77 44 68999999999999 7899999999999999999999999999997
Q ss_pred CCcc
Q psy6358 1920 RSPQ 1923 (1945)
Q Consensus 1920 ~~~~ 1923 (1945)
+++.
T Consensus 250 ~~~~ 253 (260)
T 3jxi_A 250 ADAA 253 (260)
T ss_dssp HHHC
T ss_pred Cccc
Confidence 6544
No 81
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.59 E-value=2.6e-16 Score=182.32 Aligned_cols=98 Identities=27% Similarity=0.366 Sum_probs=89.5
Q ss_pred CcHHHHHHHHHCCCCccccC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcC
Q psy6358 1822 NTDDCASYLINADADINVPD-NSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNF 1885 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d-~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~G 1885 (1945)
++.+++++||++|++++.++ ..|+||||+|++.++.++|++||++|++++. ++.++|++||++|
T Consensus 127 ~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 206 (241)
T 1k1a_A 127 ECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSG 206 (241)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 68999999999999999999 8999999999999999999999999999876 8999999999999
Q ss_pred CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCC
Q psy6358 1886 ANREITDHMDRLPRDVASERLHHDIVRLLDEHIP 1919 (1945)
Q Consensus 1886 ad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga 1919 (1945)
|+++.+|..|+||||+|+.+++.+|+++|+++++
T Consensus 207 a~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 207 ADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp CCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred CCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 9999999999999999999999999999998865
No 82
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.59 E-value=9.8e-16 Score=183.27 Aligned_cols=140 Identities=14% Similarity=0.109 Sum_probs=114.0
Q ss_pred ccccccccCCCCCCccc-----ccccccccCCCCce-eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCC-CCHHH
Q psy6358 1777 WFPEGFLRNNSGPRRQD-----DLSLENTERNGSYL-CECAKGYEGRDCLINTDDCASYLINADADINVPDNSG-KTALH 1849 (1945)
Q Consensus 1777 w~p~~~~~~~~~~~~~e-----g~dl~~~~~~~G~t-Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G-~T~Lh 1849 (1945)
|.|++++.........+ |.++.... ..|.| ||+|+.. ++.++|++||++|++++.+|..| .||||
T Consensus 63 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~t~L~~A~~~-------g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~ 134 (285)
T 3kea_A 63 EFPLHQAATLEDTKIVKILLFSGLDDSQFD-DKGNTALYYAVDS-------GNMQTVKLFVKKNWRLMFYGKTGWKTSFY 134 (285)
T ss_dssp CCHHHHHTTSSSCHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHT-------TCHHHHHHHHHHCGGGGGCSSSGGGSHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcC-CCCCcHHHHHHHc-------CCHHHHHHHHhcCCCCCccCCCCCCCHHH
Confidence 67877777553322211 44433222 22333 5555544 78999999999999999999999 79999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCC--------------CCHHHHHHHHHcCCCCCCcCCCCCCH-HHHHHHcCcHHHHHHH
Q psy6358 1850 WAAAVNNIDAVNILLSHGVNPRE--------------GSYGACKALLDNFANREITDHMDRLP-RDVASERLHHDIVRLL 1914 (1945)
Q Consensus 1850 ~Aa~~g~~~iv~~LL~~Gadvn~--------------g~~~~v~~LL~~Gad~~~~d~~G~Tp-L~~A~~~g~~eiv~~L 1914 (1945)
+|+..++.++|++||++|+++.. ++.++|++||++||+++.+|..|+|| ||+|+..++.++|++|
T Consensus 135 ~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~L 214 (285)
T 3kea_A 135 HAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQAL 214 (285)
T ss_dssp HHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHH
Confidence 99999999999999999998632 89999999999999999999999998 9999999999999999
Q ss_pred HhCCCCCccc
Q psy6358 1915 DEHIPRSPQM 1924 (1945)
Q Consensus 1915 l~~ga~~~~~ 1924 (1945)
+++|++....
T Consensus 215 l~~gad~~~~ 224 (285)
T 3kea_A 215 FKYDINIYSA 224 (285)
T ss_dssp TTSCBCSTTT
T ss_pred HHcCCCCCCC
Confidence 9999886654
No 83
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.59 E-value=6.2e-16 Score=178.85 Aligned_cols=109 Identities=19% Similarity=0.097 Sum_probs=101.6
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------- 1872 (1945)
||+|+.. ++.++|++||+.|++++.+|..|+||||+|+..++.++|++||++|++++.
T Consensus 25 L~~A~~~-------g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~ 97 (229)
T 2vge_A 25 LLDAALT-------GELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASC 97 (229)
T ss_dssp HHHHHHH-------TCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHc-------CCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 6666665 789999999999999999999999999999999999999999999999876
Q ss_pred CCHHHHHHHHHcCCCCCCcC-CCCCCHHHHH--HHcCcHHHHHHHHhCCCCCcc
Q psy6358 1873 GSYGACKALLDNFANREITD-HMDRLPRDVA--SERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1873 g~~~~v~~LL~~Gad~~~~d-~~G~TpL~~A--~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
++.++|++||++|++++.++ ..|+||||+| +..++.++|++|+++|++...
T Consensus 98 g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~ 151 (229)
T 2vge_A 98 NDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGL 151 (229)
T ss_dssp TCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccc
Confidence 89999999999999999997 6999999999 999999999999999876544
No 84
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.58 E-value=1.6e-15 Score=175.48 Aligned_cols=101 Identities=27% Similarity=0.261 Sum_probs=94.9
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCC---------------CCHHHHHHHHHcC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHG-VNPRE---------------GSYGACKALLDNF 1885 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~G-advn~---------------g~~~~v~~LL~~G 1885 (1945)
++.++|++|+++|++++.++..|+||||+|+..++.+++++||++| ++++. ++.+++++||++|
T Consensus 55 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 134 (237)
T 3b7b_A 55 NHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKG 134 (237)
T ss_dssp TCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 6899999999999999999999999999999999999999999998 67654 8899999999999
Q ss_pred CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCc
Q psy6358 1886 ANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSP 1922 (1945)
Q Consensus 1886 ad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 1922 (1945)
++++.+|..|+||||+|+..++.+++++|+++|++..
T Consensus 135 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 171 (237)
T 3b7b_A 135 SDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLH 171 (237)
T ss_dssp CCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTT
T ss_pred CCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999999999998654
No 85
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.58 E-value=7.3e-16 Score=188.77 Aligned_cols=83 Identities=24% Similarity=0.209 Sum_probs=61.9
Q ss_pred CCCCCHHHHHHHc---CCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Q psy6358 1842 NSGKTALHWAAAV---NNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFANREITDHMDRLPRDVAS 1903 (1945)
Q Consensus 1842 ~~G~T~Lh~Aa~~---g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~ 1903 (1945)
..|+||||+|+.. ++.+++++||++|++++. ++.++|++||++|++++.+|..|+||||+|+
T Consensus 209 ~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~ 288 (351)
T 3utm_A 209 QSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAA 288 (351)
T ss_dssp TTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 3456777777777 346777777777777654 7778888888888888888888888888888
Q ss_pred HcCcHHHHHHHHhCCCCCccc
Q psy6358 1904 ERLHHDIVRLLDEHIPRSPQM 1924 (1945)
Q Consensus 1904 ~~g~~eiv~~Ll~~ga~~~~~ 1924 (1945)
+.++.++|++|+++|+++...
T Consensus 289 ~~~~~~~v~~Ll~~gad~~~~ 309 (351)
T 3utm_A 289 LAGHLQTCRLLLSYGSDPSII 309 (351)
T ss_dssp HHTCHHHHHHHHHTTCCTTCC
T ss_pred HcCcHHHHHHHHHcCCCCCCc
Confidence 888888888888888776554
No 86
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.57 E-value=2e-15 Score=178.82 Aligned_cols=101 Identities=24% Similarity=0.297 Sum_probs=93.4
Q ss_pred CcHHHHHHHHHCCCCcccc----------CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCC---------------CC-
Q psy6358 1822 NTDDCASYLINADADINVP----------DNSGKTALHWAAAVNNIDAVNILLSH-GVNPRE---------------GS- 1874 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~----------d~~G~T~Lh~Aa~~g~~~iv~~LL~~-Gadvn~---------------g~- 1874 (1945)
++.+++++|+++|++++.+ +..|.||||+|++.++.++|++||++ |++++. ++
T Consensus 116 ~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 195 (285)
T 1wdy_A 116 GKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD 195 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCT
T ss_pred CCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcccc
Confidence 6899999999999999988 78899999999999999999999998 999776 45
Q ss_pred ---HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh-CCCCCc
Q psy6358 1875 ---YGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDE-HIPRSP 1922 (1945)
Q Consensus 1875 ---~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~-~ga~~~ 1922 (1945)
.+++++|+++|++++.+|..|+||||+|++.++.++|++|++ +|++..
T Consensus 196 ~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~ 247 (285)
T 1wdy_A 196 SDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN 247 (285)
T ss_dssp TTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTT
T ss_pred chHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCcc
Confidence 889999999999999999999999999999999999999999 776544
No 87
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.57 E-value=3.5e-15 Score=167.92 Aligned_cols=109 Identities=21% Similarity=0.217 Sum_probs=99.6
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCC--------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILL-SHGVNPRE-------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL-~~Gadvn~-------------- 1872 (1945)
||+|+.. ++.++|++||++|++++.+|..|+||||+|+..++.+++++|| ..+++++.
T Consensus 43 L~~A~~~-------~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 115 (201)
T 3hra_A 43 LNIAVHN-------NDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAE 115 (201)
T ss_dssp HHHHHHH-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHH
T ss_pred HHHHHHc-------CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHH
Confidence 6666655 7899999999999999999999999999999999999999999 56667655
Q ss_pred -CCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCc-----HHHHHHHHhCCCCCcc
Q psy6358 1873 -GSYGACKALLDNF-ANREITDHMDRLPRDVASERLH-----HDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1873 -g~~~~v~~LL~~G-ad~~~~d~~G~TpL~~A~~~g~-----~eiv~~Ll~~ga~~~~ 1923 (1945)
++.++|++||++| ++++.+|..|+||||+|+..+. .++|++|+++|++...
T Consensus 116 ~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~ 173 (201)
T 3hra_A 116 KGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSI 173 (201)
T ss_dssp TTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTC
T ss_pred cCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCc
Confidence 8999999999999 9999999999999999999887 9999999999987654
No 88
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.57 E-value=1.6e-15 Score=173.99 Aligned_cols=110 Identities=17% Similarity=0.203 Sum_probs=92.3
Q ss_pred CCCcccc-----CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCC---------------C
Q psy6358 1815 EGRDCLI-----NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSH-GVNPRE---------------G 1873 (1945)
Q Consensus 1815 ~g~tpL~-----~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~-Gadvn~---------------g 1873 (1945)
.|+|||| ++.++|++||+.|++++.+|..|+||||+|+..++.++|++||++ |++++. +
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKG 151 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcC
Confidence 3455554 799999999999999999999999999999999999999999999 999876 8
Q ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCccc
Q psy6358 1874 SYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQM 1924 (1945)
Q Consensus 1874 ~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~~ 1924 (1945)
+.++|++||++||+++++|..|+||||+|+..++.+++++|+++++.....
T Consensus 152 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~ 202 (222)
T 3ehr_A 152 YADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLS 202 (222)
T ss_dssp CHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC------------
T ss_pred CHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhcc
Confidence 999999999999999999999999999999999999999999999876543
No 89
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.57 E-value=3.6e-15 Score=172.01 Aligned_cols=108 Identities=21% Similarity=0.238 Sum_probs=90.5
Q ss_pred CCCcccc-----CcHHHHHHHHHCCCCc-----cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------------
Q psy6358 1815 EGRDCLI-----NTDDCASYLINADADI-----NVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE------------ 1872 (1945)
Q Consensus 1815 ~g~tpL~-----~~~~~v~~Ll~~gadv-----n~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~------------ 1872 (1945)
.|+|||| ++.++|++||++|+++ +.+|..|+||||+|++.++.++|++||++|++++.
T Consensus 36 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~ 115 (232)
T 2rfa_A 36 MGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115 (232)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeeccc
Confidence 4555554 6889999999988887 66777899999999999999999999999888643
Q ss_pred ----------------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHH----HHHHhCCCCCc
Q psy6358 1873 ----------------GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIV----RLLDEHIPRSP 1922 (1945)
Q Consensus 1873 ----------------g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv----~~Ll~~ga~~~ 1922 (1945)
++.++|++||++||+++.+|..|+||||+|+..++.+++ ++|+++|++..
T Consensus 116 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 116 NLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp CSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCS
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchh
Confidence 678899999999999999999999999999999998877 88888888654
No 90
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.56 E-value=2.5e-15 Score=187.34 Aligned_cols=86 Identities=29% Similarity=0.603 Sum_probs=57.6
Q ss_pred CCCeeecCCCCCccCCCCCCCCCCCCCCCCCCCCEEeeC--C--------CCCceeecCCCCcCCCCCCCCCCCCCCCCC
Q psy6358 16 SPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLK--S--------LDRYTCTCAPGFTGSQCELQDHCASSPCRN 85 (1945)
Q Consensus 16 ~~~~~C~C~~g~~g~~C~~~~~~~C~~~~C~ngg~C~~~--~--------~~~~~C~C~~G~~G~~C~~~~~C~~~~C~n 85 (1945)
.++|.|.|+.+|.+..++....+ + .+++.|..... . ...+.|.|++||+|+.|+. .| .||.+
T Consensus 136 nGs~~~~~p~~~~~~~~~~~~~~-~---~~~d~g~y~~~~~~g~~~~~~~~~~~~c~C~~g~~G~~C~~--~C--~~C~~ 207 (423)
T 2gy5_A 136 NGSFIHSVPRHEVPDILEVHLPH-A---QPQDAGVYSARYIGGNLFTSAFTRLIVRRCEAQKWGPECNH--LC--TACMN 207 (423)
T ss_dssp TTEEEEEECGGGCCSEEEEEETT-C---CGGGCEEEEEEETTCCGGGCEEEEEEECSSCTTEESTTSCE--EC--CCCCT
T ss_pred CCeEeeccCccccCCeEEeccCc-C---CCCCCCeEeeEECCCcEeccccccccCCcCCCCCCCCCCCC--CC--CCCCC
Confidence 35788999999998877643211 1 22333432211 0 1134688999999988874 45 38888
Q ss_pred CCeeccCCCCceeecCCCccCCcccc
Q psy6358 86 GAVCTSLEDTYECDCAPGFVGQTCSE 111 (1945)
Q Consensus 86 ~g~C~~~~~~~~C~C~~Gf~G~~C~~ 111 (1945)
+|+|.+ ++|+|.|++||+|..|+.
T Consensus 208 ~G~C~~--~~g~C~C~~G~~G~~Ce~ 231 (423)
T 2gy5_A 208 NGVCHE--DTGECICPPGFMGRTCEK 231 (423)
T ss_dssp TCEECT--TTCCEECCTTEESTTSCE
T ss_pred CCEEEC--CCCcEeCCCCccCCCccc
Confidence 899976 467899999999988863
No 91
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.56 E-value=5.7e-15 Score=180.76 Aligned_cols=91 Identities=22% Similarity=0.328 Sum_probs=54.2
Q ss_pred HHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCCCC
Q psy6358 1824 DDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFANR 1888 (1945)
Q Consensus 1824 ~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Gad~ 1888 (1945)
.+++++|+++|++++.+|..|+||||+|++.++.++|++||++|++++. ++.++|++||++||++
T Consensus 227 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~ 306 (351)
T 3utm_A 227 KQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDP 306 (351)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC
Confidence 5566666666666666666666666666666666666666666666553 5556666666666666
Q ss_pred CCcCCCCCCHHHHHHHcCcHHHHHHHHhCC
Q psy6358 1889 EITDHMDRLPRDVASERLHHDIVRLLDEHI 1918 (1945)
Q Consensus 1889 ~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~g 1918 (1945)
+++|..|+|||++| +.+++++|.+..
T Consensus 307 ~~~~~~g~tal~~a----~~~~~~~l~~~~ 332 (351)
T 3utm_A 307 SIISLQGFTAAQMG----NEAVQQILSEST 332 (351)
T ss_dssp TCCCTTSCCHHHHS----CHHHHHHHHHC-
T ss_pred CCcCCCCCChhhhh----hHHHHHHHHhcc
Confidence 66666666666655 445555555554
No 92
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.56 E-value=1.4e-15 Score=175.43 Aligned_cols=100 Identities=19% Similarity=0.162 Sum_probs=55.2
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC----------------CCHHHHHHHHHcC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE----------------GSYGACKALLDNF 1885 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~----------------g~~~~v~~LL~~G 1885 (1945)
++.++|++|++.|++++.+|..|+||||+|++.++.+++++||++|++++. ...+++++|+++|
T Consensus 87 ~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~ 166 (240)
T 3eu9_A 87 GHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFN 166 (240)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcC
Confidence 455555555555555555555555555555555555555555555555443 1244555555555
Q ss_pred CCCCCcCC-CCCCHHHHHHHcCcHHHHHHHHhCCCCC
Q psy6358 1886 ANREITDH-MDRLPRDVASERLHHDIVRLLDEHIPRS 1921 (1945)
Q Consensus 1886 ad~~~~d~-~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 1921 (1945)
++++.++. .|+||||+|+..++.++|++|+++|++.
T Consensus 167 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 203 (240)
T 3eu9_A 167 VSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANV 203 (240)
T ss_dssp CCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCT
T ss_pred CCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 55555554 5555555555555555555555555443
No 93
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.56 E-value=4.6e-15 Score=184.59 Aligned_cols=98 Identities=30% Similarity=0.430 Sum_probs=89.9
Q ss_pred cHHHHHHHHHCCCCccc--------cCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCC---------------CCHHHH
Q psy6358 1823 TDDCASYLINADADINV--------PDNSGKTALHWAAAVNNIDAVNILLSHG-VNPRE---------------GSYGAC 1878 (1945)
Q Consensus 1823 ~~~~v~~Ll~~gadvn~--------~d~~G~T~Lh~Aa~~g~~~iv~~LL~~G-advn~---------------g~~~~v 1878 (1945)
+.++|++||++|++++. +|..|+||||+|+..++.++|++||+++ ++++. ++.++|
T Consensus 250 ~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv 329 (373)
T 2fo1_E 250 QVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVV 329 (373)
T ss_dssp HHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred hHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHH
Confidence 78999999999999986 6778999999999999999999999876 88776 899999
Q ss_pred HHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q psy6358 1879 KALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPR 1920 (1945)
Q Consensus 1879 ~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 1920 (1945)
++||++||+++++|..|+||||+|+.+++.+||++|++++++
T Consensus 330 ~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 330 MYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred HHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 999999999999999999999999999999999999999875
No 94
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.55 E-value=2.2e-15 Score=172.98 Aligned_cols=106 Identities=21% Similarity=0.328 Sum_probs=96.6
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCC--CCccc-cCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCC----------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINAD--ADINV-PDNSGKTALHWAAAVNNIDAVNILLSHG--VNPRE---------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~g--advn~-~d~~G~T~Lh~Aa~~g~~~iv~~LL~~G--advn~---------- 1872 (1945)
||+|+.. ++.++|++|+++| ++++. +|..|+||||+|+..++.+++++||++| ++++.
T Consensus 40 L~~A~~~-------~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~ 112 (228)
T 2dzn_A 40 LHWSVSF-------QAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLH 112 (228)
T ss_dssp HHHHHHT-------TCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHH
T ss_pred HHHHHHc-------CCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHH
Confidence 6666655 6899999999999 66666 8899999999999999999999999999 66654
Q ss_pred -----CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCC-CC
Q psy6358 1873 -----GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHI-PR 1920 (1945)
Q Consensus 1873 -----g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~g-a~ 1920 (1945)
++.+++++||++|++++.+|..|+||||+|+..++.++|++|+++| ++
T Consensus 113 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 166 (228)
T 2dzn_A 113 LAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA 166 (228)
T ss_dssp HHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCC
T ss_pred HHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 8899999999999999999999999999999999999999999999 54
No 95
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.55 E-value=3.5e-16 Score=170.67 Aligned_cols=55 Identities=29% Similarity=0.778 Sum_probs=34.3
Q ss_pred CCceeeecCC--CCCCC---cCccCCCccCCCCCCCCCCCeeeccCCCeEEecCCCcccCC
Q psy6358 283 INKYSCLCLA--TYTGD---LCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPD 338 (1945)
Q Consensus 283 ~~~y~C~C~~--G~~G~---~C~~d~deC~~~~~~C~~~~~C~n~~g~~~C~C~~Gy~G~~ 338 (1945)
.++|+|.|++ ||+|+ .+.+|||||...+++|++ ++|+|+.|+|+|.|++||+|..
T Consensus 97 ~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 97 TSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp SHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCBCT
T ss_pred CCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCEEeeCCCCccCCC
Confidence 3456666655 56554 233567777665566776 3777777777777777777654
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.55 E-value=3.4e-15 Score=154.57 Aligned_cols=84 Identities=23% Similarity=0.250 Sum_probs=71.5
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDNFANREITDHMDRLPRDV 1901 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~ 1901 (1945)
++.++|++||+.|++++.+|..|+||||+|++.++.++|++||++| ++++.+|..|+||||+
T Consensus 18 ~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g------------------~~~~~~d~~g~tpL~~ 79 (123)
T 3aaa_C 18 GDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG------------------ADINAPDKHHITPLLS 79 (123)
T ss_dssp TCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTT------------------CCTTCCCTTSCCHHHH
T ss_pred CCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcC------------------CCCCcCCCCCCCHHHH
Confidence 7899999999999999999999999999999999999999998888 5556677777777777
Q ss_pred HHHcCcHHHHHHHHhCCCCCcc
Q psy6358 1902 ASERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1902 A~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
|+..++.++|++|+++|++...
T Consensus 80 A~~~~~~~~v~~Ll~~ga~~~~ 101 (123)
T 3aaa_C 80 AVYEGHVSCVKLLLSKGADKTV 101 (123)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHcCCHHHHHHHHHcCCCCCC
Confidence 7777777777777777776543
No 97
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.55 E-value=4.3e-15 Score=172.79 Aligned_cols=109 Identities=17% Similarity=0.053 Sum_probs=77.3
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------- 1872 (1945)
||.|++. ++.+++++||++|++++.. ..|.||||+|++.|+.++|++||++|++++.
T Consensus 9 L~~a~~~-------~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 9 LPPGKRT-------NLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH
T ss_pred Cchhhhh-------hhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 5555554 5789999999999999965 7789999999999999999999999999876
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCccc
Q psy6358 1873 GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQM 1924 (1945)
Q Consensus 1873 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~~ 1924 (1945)
++.++|++||++||+++.+|..|+||||+|+..++.++|++|+++|++....
T Consensus 81 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~ 132 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAM 132 (239)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccee
Confidence 8999999999999999999999999999999999999999999999886543
No 98
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.55 E-value=2.8e-15 Score=160.03 Aligned_cols=102 Identities=31% Similarity=0.825 Sum_probs=83.1
Q ss_pred CCCCCCCeeccCCCCccccccCCCcCC---------CCccccCCCCCCC---CCCCCCeecCCCCceeeecCCCCCCC--
Q psy6358 232 SPCQNGGVCRELDNLNYECECQSGYRG---------KNCEENIDDCPGN---LCQNGATCMDGINKYSCLCLATYTGD-- 297 (1945)
Q Consensus 232 ~~C~n~g~C~~~~~~~~~C~C~~G~~G---------~~C~~~~d~C~~~---~C~~~~~C~~~~~~y~C~C~~G~~G~-- 297 (1945)
.||.++|+|++ .|+|.|++||+| ..|+ +||+|... +|.++++|+++.++|+|.|++||+|.
T Consensus 7 ~~C~~~~~C~~----~~~C~C~~G~~g~~~~~~~~~~~C~-dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~ 81 (143)
T 2bou_A 7 RWCPQDSSCVN----ATACRCNPGFSSFSEIITTPMETCD-DINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSG 81 (143)
T ss_dssp TTCCTTEEESS----SSCEEECTTEECSSSSBCSTTCCCE-ECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTC
T ss_pred CcCCCCCEEcC----CCEEeCCCCCcCccccccCCCCcCC-ccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcC
Confidence 57899999984 389999999998 4785 78999864 89988999999999999999999876
Q ss_pred ----------cCccCCCccCCCCCCCCCCCeeeccCCCeEEecCCCcccCCC
Q psy6358 298 ----------LCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDC 339 (1945)
Q Consensus 298 ----------~C~~d~deC~~~~~~C~~~~~C~n~~g~~~C~C~~Gy~G~~C 339 (1945)
.| +|||||...+++|.++++|+|+.|+|+|+|++||+|...
T Consensus 82 ~~~~~~~~~~~C-~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~ 132 (143)
T 2bou_A 82 AKTFKNESENTC-QDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHG 132 (143)
T ss_dssp CSCBSSGGGCCE-EECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTT
T ss_pred ccccccCCCCCc-CCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCC
Confidence 45 378888766677888888888888888888888888654
No 99
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.54 E-value=4.8e-15 Score=159.80 Aligned_cols=106 Identities=21% Similarity=0.221 Sum_probs=96.9
Q ss_pred eeeecccCCCccccCcHHHHHHHHHC-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINA-DADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE-------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~-gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~-------------- 1872 (1945)
||.|+.. ++.++|++||+. +.+++.+|..|+||||+ +..++.++|++||++|++++.
T Consensus 6 L~~A~~~-------g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 77 (156)
T 1bd8_A 6 LSGAAAR-------GDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAAR 77 (156)
T ss_dssp HHHHHHH-------TCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHh-------CCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 5555555 789999999998 45999999999999999 999999999999999999876
Q ss_pred -CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCc
Q psy6358 1873 -GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSP 1922 (1945)
Q Consensus 1873 -g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 1922 (1945)
++.++|++||++|++++.+|..|+||||+|+..++.++|++|+++ ++..
T Consensus 78 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~ 127 (156)
T 1bd8_A 78 TGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH 127 (156)
T ss_dssp TTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTT
T ss_pred cCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCC
Confidence 899999999999999999999999999999999999999999998 5543
No 100
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.54 E-value=1.4e-14 Score=178.79 Aligned_cols=108 Identities=28% Similarity=0.252 Sum_probs=99.3
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccC--CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPD--NSGKTALHWAAAVNNIDAVNILLSHGVNPRE------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d--~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~------------- 1872 (1945)
||.|+... +++++|++||++|+|+|.++ ..|+||||+|+..++.++|++||++||+++.
T Consensus 203 L~~Aa~~~------g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~ 276 (368)
T 3jue_A 203 LFRASGHP------PSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHAT 276 (368)
T ss_dssp HHHHTSSS------CCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHcc------CCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 67666652 57899999999999999998 8999999999999999999999999999986
Q ss_pred --CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC
Q psy6358 1873 --GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRS 1921 (1945)
Q Consensus 1873 --g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 1921 (1945)
++.++|++||++||+++++|..|+||||+|+..++.+||++|++++++.
T Consensus 277 ~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~ 327 (368)
T 3jue_A 277 ILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMRE 327 (368)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--
T ss_pred HcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc
Confidence 8999999999999999999999999999999999999999999987543
No 101
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.53 E-value=1.1e-14 Score=188.27 Aligned_cols=109 Identities=16% Similarity=0.129 Sum_probs=99.4
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCcccc------CCCCCCHHHHHHH---cCCHHHHHHHHHCCCCCCC------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVP------DNSGKTALHWAAA---VNNIDAVNILLSHGVNPRE------ 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~------d~~G~T~Lh~Aa~---~g~~~iv~~LL~~Gadvn~------ 1872 (1945)
||.|+.. ++.++|+.||+.|+|+|.+ |..|+||||+|++ .|+.++|++||++|||+|.
T Consensus 136 L~~A~~~-------g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~ 208 (497)
T 3lvq_E 136 LWTAICN-------RDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGN 208 (497)
T ss_dssp HHHHHHH-------TCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSC
T ss_pred HHHHHhc-------cCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCC
Confidence 6777766 7999999999999999988 8899999999966 8999999999999999886
Q ss_pred ---------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCcc
Q psy6358 1873 ---------GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1873 ---------g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
++.++|++||++|||++++|..|+||||+|+..++.++|++|+++||+...
T Consensus 209 TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 209 TALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp CHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 899999999999999999999999999999999999999999999987544
No 102
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.53 E-value=5.1e-15 Score=157.98 Aligned_cols=102 Identities=26% Similarity=0.823 Sum_probs=88.7
Q ss_pred CCCCCCCeecCCCCceeeecCCCCCC---------CcCccCCCccCCCC-CCCCCCCeeeccCCCeEEecCCCcccC---
Q psy6358 271 NLCQNGATCMDGINKYSCLCLATYTG---------DLCEQDVDECSIRP-SVCHNGATCTNSVGGFSCICVNGWTGP--- 337 (1945)
Q Consensus 271 ~~C~~~~~C~~~~~~y~C~C~~G~~G---------~~C~~d~deC~~~~-~~C~~~~~C~n~~g~~~C~C~~Gy~G~--- 337 (1945)
++|.++++|++. |+|.|++||+| ..| +|||||+... .+|.++++|+|+.++|+|.|++||+|.
T Consensus 7 ~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C-~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~ 82 (143)
T 2bou_A 7 RWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETC-DDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGA 82 (143)
T ss_dssp TTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCC-EECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCC
T ss_pred CcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcC-CccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCc
Confidence 589999999974 89999999998 478 5899998753 379999999999999999999999987
Q ss_pred ---------CCCCCCCCCCC--CCCCCCCeeccCCCCeeeeCCCCCccCcc
Q psy6358 338 ---------DCSLNIDDCAG--AACFNGATCIDRVGSFYCQCTPGKTGLLC 377 (1945)
Q Consensus 338 ---------~C~~~id~C~~--~~C~~~~~C~~~~g~~~C~C~~G~~G~~C 377 (1945)
.| ++||||.. .+|.++++|+++.++|+|.|++||+|...
T Consensus 83 ~~~~~~~~~~C-~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~ 132 (143)
T 2bou_A 83 KTFKNESENTC-QDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHG 132 (143)
T ss_dssp SCBSSGGGCCE-EECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTT
T ss_pred cccccCCCCCc-CCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCC
Confidence 45 38999984 78999999999999999999999998653
No 103
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.53 E-value=3.2e-15 Score=177.92 Aligned_cols=112 Identities=18% Similarity=0.164 Sum_probs=100.6
Q ss_pred Cce-eeeecccCCCccccCcHHHHHHHHHCCC-CccccCCCCCCHHHHHH-----HcCCHHHHHHHHHCCCCCCC-----
Q psy6358 1805 SYL-CECAKGYEGRDCLINTDDCASYLINADA-DINVPDNSGKTALHWAA-----AVNNIDAVNILLSHGVNPRE----- 1872 (1945)
Q Consensus 1805 G~t-Lhlaa~~~g~tpL~~~~~~v~~Ll~~ga-dvn~~d~~G~T~Lh~Aa-----~~g~~~iv~~LL~~Gadvn~----- 1872 (1945)
|.| ||+|+.. ++.++|++||+.|+ +++.+|..|+||||+|+ ..++.+++++||++|++++.
T Consensus 111 g~T~Lh~A~~~-------g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g 183 (276)
T 4hbd_A 111 GNTALHYSVSH-------ANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAG 183 (276)
T ss_dssp SCCHHHHHHHT-------TCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTC
T ss_pred CCCHHHHHHHC-------CCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCC
Confidence 444 5555554 78999999999998 99999999999999999 66889999999999988654
Q ss_pred ----------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh-CCCCCcc
Q psy6358 1873 ----------GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDE-HIPRSPQ 1923 (1945)
Q Consensus 1873 ----------g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~-~ga~~~~ 1923 (1945)
++.++|++||++||+++++|..|+||||+|+..++.++|++|++ +|++...
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~ 245 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISL 245 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcC
Confidence 89999999999999999999999999999999999999999999 7877554
No 104
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.53 E-value=2.4e-15 Score=186.18 Aligned_cols=102 Identities=18% Similarity=0.222 Sum_probs=96.5
Q ss_pred CcHHHHHHHHHC----CCCccc-----------------cCCCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCC------
Q psy6358 1822 NTDDCASYLINA----DADINV-----------------PDNSGKTALHWAAAVN--NIDAVNILLSHGVNPRE------ 1872 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~----gadvn~-----------------~d~~G~T~Lh~Aa~~g--~~~iv~~LL~~Gadvn~------ 1872 (1945)
++.++|++||+. |++++. +|..|+||||+|+..| +.++|++||++|++++.
T Consensus 95 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~ 174 (364)
T 3ljn_A 95 NKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADE 174 (364)
T ss_dssp TCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSC
T ss_pred CCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCC
Confidence 799999999999 898888 8999999999999999 99999999999999876
Q ss_pred ---------CCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCcc
Q psy6358 1873 ---------GSYGACKALLDNFAN-----REITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1873 ---------g~~~~v~~LL~~Gad-----~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
++.++|++||++|++ ++.+|..|+||||+|+..++.++|++|+++|++...
T Consensus 175 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~ 239 (364)
T 3ljn_A 175 TPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNM 239 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTC
T ss_pred CHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 899999999999999 999999999999999999999999999999987543
No 105
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.53 E-value=5.4e-16 Score=166.31 Aligned_cols=130 Identities=28% Similarity=0.688 Sum_probs=100.5
Q ss_pred CccCCcCCCCCCCCCcEEeecCCCeEEecCCCCCCCCCCCCCCCCCCCCCCCCCeeccCCCCCCeeeecCCCCccCCCCc
Q psy6358 864 PINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQDFACHCGVGWTGRYCNE 943 (1945)
Q Consensus 864 ~~~ideC~~~pC~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~C~~~~C~~g~~C~~~~~~~~~~C~C~~G~~G~~C~~ 943 (1945)
++|||||+++||.| |+|++++++|+|.|++||+|..+. .+|++. ....|.++|.|..|+.
T Consensus 1 ~~dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~--------------~~C~~~-----~~~~C~~~~~g~~C~~ 60 (147)
T 2w86_A 1 SADIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTK--------------TICIET-----IKGTCWQTVIDGRCEI 60 (147)
T ss_dssp CCCCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTS--------------SBEEEC-----CCEEEEEEEETTEEEE
T ss_pred CCcCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCC--------------CeecCC-----CCCcccCCCCCCcccc
Confidence 46899999999996 699999999999999999987543 345543 2346778899999998
Q ss_pred cCcccCCCCCC------CCCCeeeeCCCCeEeeCCCCcc---cCCcccCCCCCCCCC--CCCCCEEecCCCCeEEecCCC
Q psy6358 944 DVDECQLSSPC------RNGATCHNTNGSYLCECAKGYE---GRDCLINTDDCASFP--CQNGGTCLDEVGDYSCLCVDG 1012 (1945)
Q Consensus 944 dideC~~~~~C------~~~~~C~n~~gsy~C~C~~Gy~---G~~C~~~~d~C~~~~--C~n~g~C~~~~g~y~C~C~~G 1012 (1945)
++++|.....| ..++.|.. -.|.|.|++||+ |..|+ +||+|...| |++ ++|++++++|+|.|++|
T Consensus 61 ~~~~c~~~~~C~~~~g~~~g~~C~~--c~~~C~C~~Gy~~~~g~~C~-dideC~~~~~~C~~-g~C~n~~g~y~C~C~~G 136 (147)
T 2w86_A 61 NINGATLKSQCCSSLGAAWGSPCTL--CQVDPICGKGYSRIKGTQCE-DIDECEVFPGVCKN-GLCVNTRGSFKCQCPSG 136 (147)
T ss_dssp EEEEEECHHHHHTTTCSEETTTTEE--CCCCTTTCTTEEEEETTEEE-ECCHHHHSTTCSSS-SEEEEETTEEEEECCTT
T ss_pred CCCccccCCccccCcCcccCCCccc--CCCcccCCCccccCCCCccC-ccccccCCCCCCCC-CEEECCCCCEEeeCCCC
Confidence 88887521111 11222321 237899999995 88997 899998654 996 59999999999999999
Q ss_pred CCCCC
Q psy6358 1013 FSGKH 1017 (1945)
Q Consensus 1013 y~G~~ 1017 (1945)
|+|..
T Consensus 137 y~g~~ 141 (147)
T 2w86_A 137 MTLDA 141 (147)
T ss_dssp CCBCT
T ss_pred CccCC
Confidence 99853
No 106
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.53 E-value=5.3e-15 Score=180.53 Aligned_cols=104 Identities=18% Similarity=0.041 Sum_probs=78.5
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCC---HHHHHHHHHCC-CCCC-------------------CCCHHHH
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNN---IDAVNILLSHG-VNPR-------------------EGSYGAC 1878 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~---~~iv~~LL~~G-advn-------------------~g~~~~v 1878 (1945)
++.++|++||++||+|+.+|..|+||||+|++.|+ .++++.||+++ ++++ .++.++|
T Consensus 142 g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v 221 (327)
T 1sw6_A 142 ANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAA 221 (327)
T ss_dssp TCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHH
Confidence 56777777777777777777777777777777776 45566666554 3332 2566777
Q ss_pred HHHHHcCC---------------------------------------------CCCCcCCCCCCHHHHHHHcCcHHHHHH
Q psy6358 1879 KALLDNFA---------------------------------------------NREITDHMDRLPRDVASERLHHDIVRL 1913 (1945)
Q Consensus 1879 ~~LL~~Ga---------------------------------------------d~~~~d~~G~TpL~~A~~~g~~eiv~~ 1913 (1945)
++||+.++ +++.+|..|+||||+|++.++.+||++
T Consensus 222 ~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~ 301 (327)
T 1sw6_A 222 KYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDA 301 (327)
T ss_dssp HHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 77766633 688999999999999999999999999
Q ss_pred HHhCCCCCccch
Q psy6358 1914 LDEHIPRSPQMV 1925 (1945)
Q Consensus 1914 Ll~~ga~~~~~~ 1925 (1945)
||++|++.....
T Consensus 302 Ll~~Gad~~~~d 313 (327)
T 1sw6_A 302 LLDYGADPFIAN 313 (327)
T ss_dssp HHHTTCCTTCCC
T ss_pred HHHcCCCCcccC
Confidence 999999876543
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.52 E-value=1.5e-14 Score=172.30 Aligned_cols=101 Identities=21% Similarity=0.195 Sum_probs=87.3
Q ss_pred CcHHHHHHHHHCCCCcc------ccCCCCCCHHHHHHHc---CCHHHHHHHHHCCCCCCC---------------CCHHH
Q psy6358 1822 NTDDCASYLINADADIN------VPDNSGKTALHWAAAV---NNIDAVNILLSHGVNPRE---------------GSYGA 1877 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn------~~d~~G~T~Lh~Aa~~---g~~~iv~~LL~~Gadvn~---------------g~~~~ 1877 (1945)
++.+.++.|++.|++++ ..|..|+||||+|++. ++.++|++||++||+++. ++.++
T Consensus 141 ~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~ 220 (278)
T 1dcq_A 141 RDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAEC 220 (278)
T ss_dssp TCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred cccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHH
Confidence 57788888888888844 4477888888888888 788888888888888775 78888
Q ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCc
Q psy6358 1878 CKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSP 1922 (1945)
Q Consensus 1878 v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 1922 (1945)
|++||++||+++++|..|+||||+|+..++.+||++|+++|+...
T Consensus 221 v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 221 LKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 888889999999999999999999999999999999999998643
No 108
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.52 E-value=1.2e-14 Score=173.96 Aligned_cols=100 Identities=15% Similarity=0.133 Sum_probs=75.6
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC----------------CCHHHHHHHHHcC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE----------------GSYGACKALLDNF 1885 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~----------------g~~~~v~~LL~~G 1885 (1945)
++.++|++||++|++++.+|..|+||||+|++.++.++|++||++|++++. ++.++|++||++|
T Consensus 73 g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g 152 (285)
T 3kea_A 73 EDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEI 152 (285)
T ss_dssp SSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTS
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 577788888888888888888888888888888888888888888777653 6777888888887
Q ss_pred CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCc
Q psy6358 1886 ANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSP 1922 (1945)
Q Consensus 1886 ad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 1922 (1945)
+++... ..|+||||+|+..++.++|++|+++|++..
T Consensus 153 ~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n 188 (285)
T 3kea_A 153 PSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTN 188 (285)
T ss_dssp CTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred Cccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCC
Confidence 766322 277788888888888888888887776544
No 109
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.52 E-value=3.4e-15 Score=193.28 Aligned_cols=249 Identities=24% Similarity=0.450 Sum_probs=110.9
Q ss_pred CCCeeecCCCCcEEecCCCcccCccCccccCCCCCCCCCCCEEeccCCCceeecCCCccCCCCccCcccCCCCCCCCCCe
Q psy6358 1100 NDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGI 1179 (1945)
Q Consensus 1100 ~~g~C~~~~g~~~C~C~~Gy~G~~C~~~ideC~~~pC~~~g~C~~~~gs~~C~C~~G~~G~~C~~~~d~C~~~~C~~gg~ 1179 (1945)
....++.....++|.|++||+|.+|++.++.+...|+.. ++|.+....+.|.|+. .+..|..+.+.+...++.+++.
T Consensus 268 g~~~~~~g~~~g~C~C~~G~~G~~Ce~C~~g~~~~p~~~-~~c~~~~~~~~C~C~~--~~~~C~~d~~~c~~~~~~~gg~ 344 (525)
T 4aqs_A 268 GVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRP-AEGRNSNACKKCNCNE--HSSSCHFDMAVFLATGNVSGGV 344 (525)
T ss_dssp -----CCSCCCCEECCCTTEESSSSCEECTTCCSSCCCC-CBTTBCCCCCCCCCTT--SCSEEEECHHHHHHTTSSCCEE
T ss_pred CcccCCCCCcCccccCcCCCcCCCCcCCCCccCCCccCC-CcccCCCcccccccCC--CCCCCCCCcccccccCccCCCc
Confidence 334556667778899999999999988888888888853 5677777777788864 3566766665666666666666
Q ss_pred eccCCCCceeeCCCCCCcCCCccccccCCCCCCCCCEEecCCCCceecccCCcC--CCccccccCcCCCCCCCCCCcccc
Q psy6358 1180 CKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRGECIDGENSFTCACHPGFT--GALCNTQLDECASNPCQFGGQCED 1257 (1945)
Q Consensus 1180 C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~g~C~~~~~s~~C~C~~Gy~--G~~C~~~i~~C~~~pC~~~g~C~~ 1257 (1945)
| +.|..||+|..|+.-.......++.... .......|.|.+.+. +..|.... ....
T Consensus 345 C--------~~C~~g~~G~~Ce~C~~g~~~~~~~~~~--~~~~~~~C~C~~~~~~~~~~C~~~~------------~~~~ 402 (525)
T 4aqs_A 345 C--------DNCQHNTMGRNCEQCKPFYFQHPERDIR--DPNLCEPCTCDPAGSENGGICDGYT------------DFSV 402 (525)
T ss_dssp E--------ESCCTTEESTTSCEECTTEEECSSSCTT--CTTCEEECCCCTTTBSGGGCCCCSC------------BGGG
T ss_pred c--------cCCCCCCCCCCcccccCcccccCCCCCC--CCCCCcCCCCCCCCCCCCccccCCC------------CCCc
Confidence 6 5677888887775322211111111100 011122344443332 22222111 0011
Q ss_pred CCCCceeecCCCCCCCCccccCccccCCCCCCCCeeecCCCCeeecCCCCccCCccccCCCCCCCCCCCCCCeeeeC---
Q psy6358 1258 LINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDL--- 1334 (1945)
Q Consensus 1258 ~~g~y~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~i~~C~~~~C~~~g~C~~~--- 1334 (1945)
....+.|.|.++|.|..|+ .|++||.|..|+ +.+.|.+.+|.++++|.+.
T Consensus 403 ~~~~~~C~C~~g~~G~~C~--------------------------~C~~Gy~G~~c~-~~~~C~~C~C~~~gtc~~~~~C 455 (525)
T 4aqs_A 403 GLIAGQCRCKLHVEGERCD--------------------------VCKEGFYDLSAE-DPYGCKSCACNPLGTIPGGNPC 455 (525)
T ss_dssp TBCSSCCCBCTTEETTTTC--------------------------EECTTEECCCTT-STTSSEECCCCTTTBCCSSCCB
T ss_pred CCCCCccCCCCCCCCCccc--------------------------CCCCCCcCCCCC-CCCCCccCCCCCCceecCCCcc
Confidence 1123345555555555442 366677776664 4455665566655555432
Q ss_pred -CCCceeeCCCCccCCCCcccCCCCCCCCCCCCCEeecCCCCceeeCCCCCCCCCCccCCCCCCCCCCCCCCeEeeCC--
Q psy6358 1335 -IDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHL-- 1411 (1945)
Q Consensus 1335 -~~~~~C~C~~Gy~G~~C~~~~deC~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~id~C~~~pC~n~g~C~~~~-- 1411 (1945)
..+++|.|++||+|.+|+ .|++||.|... ++++|.+.+|.++|.+.+.-
T Consensus 456 d~~tg~C~C~~g~~G~~Ce--------------------------~C~~G~~g~~~--~~~~C~~C~C~~~gs~~~~C~~ 507 (525)
T 4aqs_A 456 DSETGYCYCKRLVTGQRCD--------------------------QCLPQHWGLSN--DLDGCRPCDCDLGGALNNSCSE 507 (525)
T ss_dssp CTTTCCBCBCTTCCSTTTC--------------------------C----------------------------------
T ss_pred cCCCCEEECCCCCcCCCcc--------------------------cCCCCccCCCC--CCCCCcCCCCCCCCccCCccCC
Confidence 234567777777777663 24556666543 45667666777766665432
Q ss_pred CCceeecCCCCcCCCCc
Q psy6358 1412 NGYTCECQIGYTGINCE 1428 (1945)
Q Consensus 1412 ~~~~C~C~~G~~G~~C~ 1428 (1945)
..++|+|++||+|.+|+
T Consensus 508 ~tG~C~C~~G~~G~~Ce 524 (525)
T 4aqs_A 508 DSGQCSCLPHMIGRQCN 524 (525)
T ss_dssp -----------------
T ss_pred CCCeeECCCCCcCCCCC
Confidence 24467777777777776
No 110
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.52 E-value=1.5e-14 Score=160.95 Aligned_cols=95 Identities=22% Similarity=0.316 Sum_probs=85.3
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC----------------CCHHHHHHHHHcC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE----------------GSYGACKALLDNF 1885 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~----------------g~~~~v~~LL~~G 1885 (1945)
++.++|++||+ |++++.+|..|+||||+|++.++.++|++||++|++++. ++.++|++||++|
T Consensus 55 g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 133 (183)
T 3deo_A 55 ADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELG 133 (183)
T ss_dssp TCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred CCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcC
Confidence 78999999999 999999999999999999999999999999999999864 8899999999999
Q ss_pred CCCCCcCCCCCCHHHHHHHc----------------CcHHHHHHHHhC
Q psy6358 1886 ANREITDHMDRLPRDVASER----------------LHHDIVRLLDEH 1917 (1945)
Q Consensus 1886 ad~~~~d~~G~TpL~~A~~~----------------g~~eiv~~Ll~~ 1917 (1945)
|+++++|..|+||||+|++. ++.+|+++|.++
T Consensus 134 a~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 134 ADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp CCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCcCCCCCCCCHHHHHHHhccCcccccHHHHHHHcCHHHHHHHHHHh
Confidence 99999999999999988776 456666666654
No 111
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.51 E-value=2.9e-14 Score=174.51 Aligned_cols=108 Identities=23% Similarity=0.199 Sum_probs=99.9
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPDN-SGKTALHWAAAVNNIDAVNILLSHGVNPRE-------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~-~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~-------------- 1872 (1945)
||.|++. +++++|++||++|||||.++. .|+||||+|++.|+.++|++||++||+++.
T Consensus 29 L~~Av~~-------g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~ 101 (337)
T 4g8k_A 29 LIKAVQN-------EDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAI 101 (337)
T ss_dssp HHHHHHT-------TCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHc-------CCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHh
Confidence 6666665 799999999999999999875 599999999999999999999999999876
Q ss_pred -CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCc
Q psy6358 1873 -GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSP 1922 (1945)
Q Consensus 1873 -g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 1922 (1945)
.+..++++|++++++++.+|..|+||||+|+..++.++|++|+++|++..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~ 152 (337)
T 4g8k_A 102 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVN 152 (337)
T ss_dssp HTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcc
Confidence 77889999999999999999999999999999999999999999998654
No 112
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.51 E-value=5.4e-15 Score=151.96 Aligned_cols=104 Identities=29% Similarity=0.694 Sum_probs=85.0
Q ss_pred ccCCcCCCCCCCCCcEEeec-CCCeEEecCCCCCCCCCCCC--CCCCCCCCCCCCCeeccCCCCCCeeeecCCCCc---c
Q psy6358 865 INIDDCAFKPCRHGGTCIDL-VNAYKCVCQVPYTGHDCHQK--LDPCVPNRCQHGARCTPSANFQDFACHCGVGWT---G 938 (1945)
Q Consensus 865 ~~ideC~~~pC~~~g~C~~~-~~~y~C~C~~G~~G~~C~~~--~~~C~~~~C~~g~~C~~~~~~~~~~C~C~~G~~---G 938 (1945)
+|||||.++||++ +|+++ .++|+|.|++||+|..+..+ .++|..++|. ++|++. ++|+|.|++||+ |
T Consensus 2 ~dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~--~~C~~~---~~y~C~C~~Gy~~~~g 74 (118)
T 1dx5_I 2 EPVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACP--ADCDPN---TQASCECPEGYILDDG 74 (118)
T ss_dssp CCCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETTEEEEEEECCCSSEEE--CEECTT---STTCEECCTTEEEETT
T ss_pred CccccCCCCCCCC--CCCCCCCCCEEeECCCCccccCCCCCccccccCCCCCC--CcccCC---CCeEeECCCCccCCCC
Confidence 4899999999985 99999 99999999999999854211 1235566666 688762 689999999999 8
Q ss_pred CCCCccCcccCCCCCCCCCCeeeeCCCCeEeeCCCCcccC
Q psy6358 939 RYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGR 978 (1945)
Q Consensus 939 ~~C~~dideC~~~~~C~~~~~C~n~~gsy~C~C~~Gy~G~ 978 (1945)
..| +|||||+..++| +++|+|+.|+|+|.|++||+|.
T Consensus 75 ~~C-~dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 75 FIC-TDIDECENGGFC--SGVCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp TEE-EECCHHHHCSSC--SSEEEECSSSEEEEECSSSSCE
T ss_pred Ccc-ccccccCCCCCC--cCeEEeCCCCEEEECCCCCccC
Confidence 888 689999854788 6799999999999999999874
No 113
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.51 E-value=1.3e-14 Score=148.04 Aligned_cols=94 Identities=28% Similarity=0.404 Sum_probs=83.3
Q ss_pred ccCCCcccc-----CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC
Q psy6358 1813 GYEGRDCLI-----NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDNFAN 1887 (1945)
Q Consensus 1813 ~~~g~tpL~-----~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~g~~~~v~~LL~~Gad 1887 (1945)
...|+|||| ++.+++++||++|++++.+|..|+||||+|++.++.++|++||++| ++
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g------------------~~ 67 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG------------------AD 67 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT------------------CC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC------------------CC
Confidence 344555554 6899999999999999999999999999999999999998888777 67
Q ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCccc
Q psy6358 1888 REITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQM 1924 (1945)
Q Consensus 1888 ~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~~ 1924 (1945)
++.+|..|+||||+|+..++.+||++|+++|++....
T Consensus 68 ~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~ 104 (115)
T 2l6b_A 68 VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNAR 104 (115)
T ss_dssp TTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHH
T ss_pred CcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcC
Confidence 7889999999999999999999999999999986553
No 114
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.50 E-value=2e-14 Score=167.83 Aligned_cols=97 Identities=21% Similarity=0.296 Sum_probs=91.3
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC----------------CCHHHHHHHHHcC
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE----------------GSYGACKALLDNF 1885 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~----------------g~~~~v~~LL~~G 1885 (1945)
++.++|++||+ |+++|.+|..|+||||+|+..|+.++|++||++|++++. ++.++|++||++|
T Consensus 56 g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 134 (244)
T 3ui2_A 56 ADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELG 134 (244)
T ss_dssp TCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 78999999999 999999999999999999999999999999999999865 8899999999999
Q ss_pred CCCCCcCCCCCCHHHHHH----------------HcCcHHHHHHHHhCCC
Q psy6358 1886 ANREITDHMDRLPRDVAS----------------ERLHHDIVRLLDEHIP 1919 (1945)
Q Consensus 1886 ad~~~~d~~G~TpL~~A~----------------~~g~~eiv~~Ll~~ga 1919 (1945)
|+++++|..|+||||+|+ ..++.+||++|++++.
T Consensus 135 a~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 135 ADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVF 184 (244)
T ss_dssp CCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred CCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhcc
Confidence 999999999999999988 6689999999999754
No 115
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.50 E-value=2.4e-14 Score=151.06 Aligned_cols=90 Identities=28% Similarity=0.321 Sum_probs=82.4
Q ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCCCCCCcCCCCCCH
Q psy6358 1834 DADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFANREITDHMDRLP 1898 (1945)
Q Consensus 1834 gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Gad~~~~d~~G~Tp 1898 (1945)
|+|+ .+|..|+||||+|+..++.++|++||++|++++. ++.++|++||++|++++.+|..|+||
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 6788 7899999999999999999999999999999876 88999999999999999999999999
Q ss_pred HHHHHHcCcHHHHHHHHhCCCCCccc
Q psy6358 1899 RDVASERLHHDIVRLLDEHIPRSPQM 1924 (1945)
Q Consensus 1899 L~~A~~~g~~eiv~~Ll~~ga~~~~~ 1924 (1945)
||+|+..++.++|++|+++|++....
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~~~~ 105 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGASRNAV 105 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCC
Confidence 99999999999999999999886543
No 116
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.50 E-value=6.3e-14 Score=161.58 Aligned_cols=108 Identities=26% Similarity=0.269 Sum_probs=92.0
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------- 1872 (1945)
||.|+.. ++.++|++||+.|++++.+|..|+||||+|++.++.++|++||++|++++.
T Consensus 13 l~~A~~~-------g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~ 85 (240)
T 3eu9_A 13 IVKATQY-------GIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATR 85 (240)
T ss_dssp HHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHH
T ss_pred HHHHHHc-------CChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHH
Confidence 5555555 688899999999999988888899999999999999999999998888654
Q ss_pred -CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCc
Q psy6358 1873 -GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSP 1922 (1945)
Q Consensus 1873 -g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 1922 (1945)
++.++|++||++|++++.+|..|+||||+|+..++.+++++|++++++..
T Consensus 86 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~ 136 (240)
T 3eu9_A 86 QGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD 136 (240)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc
Confidence 78889999999999999888889999999999999999999998887643
No 117
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.50 E-value=1.8e-14 Score=173.62 Aligned_cols=106 Identities=16% Similarity=0.133 Sum_probs=97.9
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccc------cCCCCCCHHHHHHHc---CCHHHHHHHHHCCCCCCC------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINV------PDNSGKTALHWAAAV---NNIDAVNILLSHGVNPRE------ 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~------~d~~G~T~Lh~Aa~~---g~~~iv~~LL~~Gadvn~------ 1872 (1945)
||.|+.. +++++|++||+.|+|++. +|..|+||||+|++. +++++|++||++||+++.
T Consensus 155 L~~A~~~-------g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~ 227 (301)
T 2b0o_E 155 LWTAICN-------RDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGN 227 (301)
T ss_dssp HHHHHHT-------TCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCC
T ss_pred Hhhhhhc-------cCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCC
Confidence 6666655 788999999999999998 689999999999997 899999999999999876
Q ss_pred ---------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q psy6358 1873 ---------GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPR 1920 (1945)
Q Consensus 1873 ---------g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 1920 (1945)
++.++|++||++||+++++|..|+||||+|+..++.+||++|+++|++
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG 284 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC
Confidence 889999999999999999999999999999999999999999999865
No 118
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.49 E-value=2.1e-14 Score=186.43 Aligned_cols=148 Identities=31% Similarity=0.742 Sum_probs=124.1
Q ss_pred CCCCCCCCCeeccCCCCccccccCCCcCCCCccccCC---------CCCCC----CCCCCCeecCCCCceeeecC-----
Q psy6358 230 DPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENID---------DCPGN----LCQNGATCMDGINKYSCLCL----- 291 (1945)
Q Consensus 230 ~~~~C~n~g~C~~~~~~~~~C~C~~G~~G~~C~~~~d---------~C~~~----~C~~~~~C~~~~~~y~C~C~----- 291 (1945)
.+.+|.++|+|. .++|.|.+||+|..|+.+++ .|... +|.++|+|+++ +|.|+
T Consensus 433 ~s~~Cs~~G~C~-----~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~G----~C~C~~~~~~ 503 (687)
T 3k6s_B 433 DRSLCHGKGFLE-----CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVP 503 (687)
T ss_dssp CSSTGGGSEEES-----SSSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEETT----EEEECCCCST
T ss_pred CCCCCCCCCEEe-----CCEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeCC----EEEcCCCCCC
Confidence 567899999997 35899999999999996555 58643 59999999953 79999
Q ss_pred -CCCCCCcCccCCCccCCC-CCCCCC--CCeeeccCCCeEEecCCCcccCCCC--CCCCCCCCC---CCCCCCeeccCCC
Q psy6358 292 -ATYTGDLCEQDVDECSIR-PSVCHN--GATCTNSVGGFSCICVNGWTGPDCS--LNIDDCAGA---ACFNGATCIDRVG 362 (1945)
Q Consensus 292 -~G~~G~~C~~d~deC~~~-~~~C~~--~~~C~n~~g~~~C~C~~Gy~G~~C~--~~id~C~~~---~C~~~~~C~~~~g 362 (1945)
+||+|..|+.++++|... ..+|.+ +|+|++ | +|.|++||+|..|+ .+++.|... +|.++|+|+.
T Consensus 504 ~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~--g--~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~--- 576 (687)
T 3k6s_B 504 GKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC--G--KCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC--- 576 (687)
T ss_dssp TCCEESTTSCEESSCSCEETTEETSHHHHEEEET--T--EEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS---
T ss_pred CCCccccccccccccccCCCCcCcCCCCCCeEEC--C--EEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC---
Confidence 999999999888899742 346998 899985 3 89999999999998 446889765 8999999987
Q ss_pred CeeeeCCCCCccCccCCCCcccCCCCCCCCccc
Q psy6358 363 SFYCQCTPGKTGLLCHLEDACTSNPCHADAICD 395 (1945)
Q Consensus 363 ~~~C~C~~G~~G~~C~~~d~C~~~~C~~~~~C~ 395 (1945)
+.|.|++||+|..|+.-..| .+||.+++.|.
T Consensus 577 -g~C~C~~Gy~G~~Ce~c~~C-~~~C~~~g~Cv 607 (687)
T 3k6s_B 577 -NVCECHSGYQLPLCQECPGC-PSPCGKYISCA 607 (687)
T ss_dssp -SCBCCSTTCCTTTTCCCTTS-CCCCTTTHHHH
T ss_pred -CEEECCCCCcCCCCCCCCCC-CcccCCCCCCC
Confidence 47999999999999975567 46899988886
No 119
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.49 E-value=2e-14 Score=172.42 Aligned_cols=108 Identities=23% Similarity=0.242 Sum_probs=97.6
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------- 1872 (1945)
||+|+.. ++.++|++||++|+++|.+|..|+||||+|+..|+.++|++||++|++++.
T Consensus 44 l~~A~~~-------g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 116 (299)
T 1s70_B 44 FLAACSS-------GDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASC 116 (299)
T ss_dssp HHHHHHH-------TCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHc-------CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 6666665 799999999999999999999999999999999999999999999999876
Q ss_pred CCHHHHHHHHHcCCCCCCcCC-----------------------------------------------------------
Q psy6358 1873 GSYGACKALLDNFANREITDH----------------------------------------------------------- 1893 (1945)
Q Consensus 1873 g~~~~v~~LL~~Gad~~~~d~----------------------------------------------------------- 1893 (1945)
++.++|++||++|++++.+|.
T Consensus 117 g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 196 (299)
T 1s70_B 117 GYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHA 196 (299)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCT
T ss_pred CCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhc
Confidence 899999999999999987764
Q ss_pred -CCCCHHHHHHHcCcHHHHHHHHhCCCCCc
Q psy6358 1894 -MDRLPRDVASERLHHDIVRLLDEHIPRSP 1922 (1945)
Q Consensus 1894 -~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 1922 (1945)
.|.||||+|+..++.++|++|+++|++..
T Consensus 197 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~ 226 (299)
T 1s70_B 197 KSGGTALHVAAAKGYTEVLKLLIQARYDVN 226 (299)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHTTTCCTT
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHHcCCCCC
Confidence 46688888999999999999999987644
No 120
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.48 E-value=2.2e-14 Score=186.31 Aligned_cols=93 Identities=30% Similarity=0.737 Sum_probs=48.1
Q ss_pred CCccCCCCcccCCCCCC---CCCCC--CCEeecCCCCceeeCCCCCCCCCCc--cCCCCCCCC---CCCCCCeEeeCCCC
Q psy6358 1344 RGYYDARCLSDVDECAS---DPCLN--GGTCEDGLNQFICHCKPGYGGKRCE--FDIDECGSN---PCQHGGICTDHLNG 1413 (1945)
Q Consensus 1344 ~Gy~G~~C~~~~deC~~---~~C~~--~g~C~~~~g~~~C~C~~Gy~G~~C~--~~id~C~~~---pC~n~g~C~~~~~~ 1413 (1945)
+||+|..|+.+++.|.. .+|.+ +|+|+.. +|.|++||+|..|+ .+++.|... +|.++|+|..
T Consensus 505 ~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~g----~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~---- 576 (687)
T 3k6s_B 505 KLIYGQYCECDTINCERYNGQVCGGPGRGLCFCG----KCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC---- 576 (687)
T ss_dssp CCEESTTSCEESSCSCEETTEETSHHHHEEEETT----EEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS----
T ss_pred CCccccccccccccccCCCCcCcCCCCCCeEECC----EEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC----
Confidence 55555555444444542 34555 5555531 45555555555555 223455433 5655566643
Q ss_pred ceeecCCCCcCCCCcccCCCCCCCCCCCCCEEe
Q psy6358 1414 YTCECQIGYTGINCEINIDDCAFKPCRHGGTCI 1446 (1945)
Q Consensus 1414 ~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~ 1446 (1945)
++|.|++||+|.+|++ ...|. .||.++++|+
T Consensus 577 g~C~C~~Gy~G~~Ce~-c~~C~-~~C~~~g~Cv 607 (687)
T 3k6s_B 577 NVCECHSGYQLPLCQE-CPGCP-SPCGKYISCA 607 (687)
T ss_dssp SCBCCSTTCCTTTTCC-CTTSC-CCCTTTHHHH
T ss_pred CEEECCCCCcCCCCCC-CCCCC-cccCCCCCCC
Confidence 3466666666666654 23442 4566666665
No 121
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.48 E-value=3.3e-14 Score=149.93 Aligned_cols=90 Identities=24% Similarity=0.227 Sum_probs=84.7
Q ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--------------CCHHHHHHHHHcCCCCCCcCCC-CCCH
Q psy6358 1834 DADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------GSYGACKALLDNFANREITDHM-DRLP 1898 (1945)
Q Consensus 1834 gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------g~~~~v~~LL~~Gad~~~~d~~-G~Tp 1898 (1945)
+++++.+|..|+||||+|++.++.++|++||++|++++. ++.++|++||++|++++.+|.. |+||
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~ 81 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGSAQVAELLLLHGAEPNCADPATLTRP 81 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTTSCHHHHHHHHHHTCCSSCCBTTTTBCH
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCCH
Confidence 579999999999999999999999999999999999655 7899999999999999999999 9999
Q ss_pred HHHHHHcCcHHHHHHHHhCCCCCcc
Q psy6358 1899 RDVASERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1899 L~~A~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
||+|+..++.++|++|+++|++...
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~ 106 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGARLDV 106 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCCCCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 9999999999999999999987544
No 122
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.47 E-value=2.9e-15 Score=160.63 Aligned_cols=128 Identities=34% Similarity=0.763 Sum_probs=99.9
Q ss_pred cccCccccCCCCCCCCeeecCCCCceeeecCCCCCCCCCCCCCCcCCCCCCCCCCCeeccCCCCccccccCCCcCCCCcc
Q psy6358 183 ETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCE 262 (1945)
Q Consensus 183 ~~~i~eC~~~~C~~~g~C~~~~gs~~C~C~C~~G~~G~~C~~~~~~C~~~~C~n~g~C~~~~~~~~~C~C~~G~~G~~C~ 262 (1945)
++|||||+++||.+ |+|++..|+|+ |.|++||+|..+. .+|++.. ...|.++|.|..|+
T Consensus 1 ~~dideC~~~pC~n-g~C~n~~g~y~--C~C~~G~~g~~~~--------------~~C~~~~----~~~C~~~~~g~~C~ 59 (147)
T 2w86_A 1 SADIDECESSPCIN-GVCKNSPGSFI--CECSSESTLDPTK--------------TICIETI----KGTCWQTVIDGRCE 59 (147)
T ss_dssp CCCCCGGGGCCSBT-SEEEEETTEEE--EECCTTEEECTTS--------------SBEEECC----CEEEEEEEETTEEE
T ss_pred CCcCccCcCCCCCC-CEeECCCCCEE--eECCCCcccCCCC--------------CeecCCC----CCcccCCCCCCccc
Confidence 46899999999986 79999999997 6789999987542 3555332 24688899999999
Q ss_pred ccCCCCCCCCCCCCCeecCCCC----------ceeeecCCCCC---CCcCccCCCccCCCCCCCCCCCeeeccCCCeEEe
Q psy6358 263 ENIDDCPGNLCQNGATCMDGIN----------KYSCLCLATYT---GDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCI 329 (1945)
Q Consensus 263 ~~~d~C~~~~C~~~~~C~~~~~----------~y~C~C~~G~~---G~~C~~d~deC~~~~~~C~~~~~C~n~~g~~~C~ 329 (1945)
.++++|.. .+.|.+..+ .|.|.|++||+ |..|+ |||||...+++|++ ++|+|+.|+|+|.
T Consensus 60 ~~~~~c~~-----~~~C~~~~g~~~g~~C~~c~~~C~C~~Gy~~~~g~~C~-dideC~~~~~~C~~-g~C~n~~g~y~C~ 132 (147)
T 2w86_A 60 ININGATL-----KSQCCSSLGAAWGSPCTLCQVDPICGKGYSRIKGTQCE-DIDECEVFPGVCKN-GLCVNTRGSFKCQ 132 (147)
T ss_dssp EEEEEEEC-----HHHHHTTTCSEETTTTEECCCCTTTCTTEEEEETTEEE-ECCHHHHSTTCSSS-SEEEEETTEEEEE
T ss_pred cCCCcccc-----CCccccCcCcccCCCcccCCCcccCCCccccCCCCccC-ccccccCCCCCCCC-CEEECCCCCEEee
Confidence 88877642 122333322 37899999995 88996 99999887888996 4999999999999
Q ss_pred cCCCcccCC
Q psy6358 330 CVNGWTGPD 338 (1945)
Q Consensus 330 C~~Gy~G~~ 338 (1945)
|++||+|..
T Consensus 133 C~~Gy~g~~ 141 (147)
T 2w86_A 133 CPSGMTLDA 141 (147)
T ss_dssp CCTTCCBCT
T ss_pred CCCCCccCC
Confidence 999999864
No 123
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.47 E-value=2.5e-14 Score=167.81 Aligned_cols=99 Identities=21% Similarity=0.146 Sum_probs=89.0
Q ss_pred HHHHHHHHCCCCccc----cCCCCCCHHHHHHHc---CCHHHHHHHHHCCCCCC--------------C-----------
Q psy6358 1825 DCASYLINADADINV----PDNSGKTALHWAAAV---NNIDAVNILLSHGVNPR--------------E----------- 1872 (1945)
Q Consensus 1825 ~~v~~Ll~~gadvn~----~d~~G~T~Lh~Aa~~---g~~~iv~~LL~~Gadvn--------------~----------- 1872 (1945)
.++++|++.|++++. +|..|+||||+|+.. ++.++|++||++|++++ .
T Consensus 20 ~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~ 99 (256)
T 2etb_A 20 GLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIE 99 (256)
T ss_dssp THHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHH
T ss_pred HHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHH
Confidence 477888889999998 899999999999999 99999999999987754 1
Q ss_pred -CCHHHHHHHHHcCCCCCCcCCC-------------CCCHHHHHHHcCcHHHHHHHHh---CCCCCcc
Q psy6358 1873 -GSYGACKALLDNFANREITDHM-------------DRLPRDVASERLHHDIVRLLDE---HIPRSPQ 1923 (1945)
Q Consensus 1873 -g~~~~v~~LL~~Gad~~~~d~~-------------G~TpL~~A~~~g~~eiv~~Ll~---~ga~~~~ 1923 (1945)
++.++|++||++||+++.+|.. |+||||+|+..++.++|++|++ +|++...
T Consensus 100 ~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~ 167 (256)
T 2etb_A 100 KRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEA 167 (256)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC
T ss_pred cCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCc
Confidence 8899999999999999999986 9999999999999999999999 8876543
No 124
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.47 E-value=2e-14 Score=140.21 Aligned_cols=87 Identities=23% Similarity=0.636 Sum_probs=67.6
Q ss_pred CceeeCCCCccCCCCcccCCCCCCCCCCCCCEeecCCCCceeeCCCCCCCCCCc-cCCCCCCCCCCCCCCeEeeCC--CC
Q psy6358 1337 GFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCE-FDIDECGSNPCQHGGICTDHL--NG 1413 (1945)
Q Consensus 1337 ~~~C~C~~Gy~G~~C~~~~deC~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~-~~id~C~~~pC~n~g~C~~~~--~~ 1413 (1945)
+|+|.|++||+|..| ++++|...||.+ ..++|+|.|++||+ .|+ .++++|.++||+|+|+|++.. ++
T Consensus 1 sy~C~C~~g~~g~~c--~~~~c~~~pC~n------~~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~ 70 (91)
T 1tpg_A 1 SYQVICRDEKTQMIY--QQHQSWLRPVLR------SNRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSD 70 (91)
T ss_dssp CCCCCCBCSSSCCBC--CSSCEEEEECSS------SSCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSC
T ss_pred CeeeECCCCCcCCeE--CCCcccCCcccc------CCCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCC
Confidence 477888888888777 467777666654 35678888888887 787 577888888888888888876 78
Q ss_pred ceeecCCCCcCCCCcccCCC
Q psy6358 1414 YTCECQIGYTGINCEINIDD 1433 (1945)
Q Consensus 1414 ~~C~C~~G~~G~~C~~~~~~ 1433 (1945)
|+|.|++||+|.+|+++++|
T Consensus 71 ~~C~C~~G~~G~~Ce~~ide 90 (91)
T 1tpg_A 71 FVCQCPEGFAGKSCEIDTRA 90 (91)
T ss_dssp EEEECCTTCBSSSCCBCSSC
T ss_pred eEeECCCCCcCCcCCcCCCC
Confidence 88888888888888877764
No 125
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.47 E-value=1e-14 Score=171.36 Aligned_cols=100 Identities=16% Similarity=0.124 Sum_probs=89.8
Q ss_pred CcHHHHHHHHHCCCC-----------ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------------------
Q psy6358 1822 NTDDCASYLINADAD-----------INVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE------------------ 1872 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gad-----------vn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~------------------ 1872 (1945)
++.++|++||+.|++ ++.+|..|+||||+|+..|+.++|++||++|++++.
T Consensus 60 g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~ 139 (260)
T 3jxi_A 60 GRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYF 139 (260)
T ss_dssp TBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCS
T ss_pred CCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccC
Confidence 678999999998754 455566899999999999999999999999999753
Q ss_pred -----------CCHHHHHHHHH---cCCCCCCcCCCCCCHHHHHHHcCc---------HHHHHHHHhCCCCC
Q psy6358 1873 -----------GSYGACKALLD---NFANREITDHMDRLPRDVASERLH---------HDIVRLLDEHIPRS 1921 (1945)
Q Consensus 1873 -----------g~~~~v~~LL~---~Gad~~~~d~~G~TpL~~A~~~g~---------~eiv~~Ll~~ga~~ 1921 (1945)
++.++|++||+ +||+++.+|..|+||||+|++.++ .+||++|+++|++.
T Consensus 140 g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~ 211 (260)
T 3jxi_A 140 GELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKL 211 (260)
T ss_dssp CSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCccc
Confidence 67999999999 999999999999999999998887 79999999998764
No 126
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.47 E-value=2.4e-14 Score=139.64 Aligned_cols=87 Identities=29% Similarity=0.660 Sum_probs=77.1
Q ss_pred CeeeecCCCCccCCCCccCcccCCCCCCCCCCeeeeCCCCeEeeCCCCcccCCcc-cCCCCCCCCCCCCCCEEecCC--C
Q psy6358 927 DFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCL-INTDDCASFPCQNGGTCLDEV--G 1003 (1945)
Q Consensus 927 ~~~C~C~~G~~G~~C~~dideC~~~~~C~~~~~C~n~~gsy~C~C~~Gy~G~~C~-~~~d~C~~~~C~n~g~C~~~~--g 1003 (1945)
+|+|.|++||+|..| ++++|. ..|| +|..++|+|.|++||+ .|+ +++++|.++||+|+|+|++.. +
T Consensus 1 sy~C~C~~g~~g~~c--~~~~c~-~~pC------~n~~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~ 69 (91)
T 1tpg_A 1 SYQVICRDEKTQMIY--QQHQSW-LRPV------LRSNRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFS 69 (91)
T ss_dssp CCCCCCBCSSSCCBC--CSSCEE-EEEC------SSSSCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSS
T ss_pred CeeeECCCCCcCCeE--CCCccc-CCcc------ccCCCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCC
Confidence 588999999999998 478886 5555 4557899999999998 898 689999999999999999987 8
Q ss_pred CeEEecCCCCCCCCCCcCCCC
Q psy6358 1004 DYSCLCVDGFSGKHCEVDIDE 1024 (1945)
Q Consensus 1004 ~y~C~C~~Gy~G~~C~~dide 1024 (1945)
+|+|.|++||+|.+|+++|||
T Consensus 70 ~~~C~C~~G~~G~~Ce~~ide 90 (91)
T 1tpg_A 70 DFVCQCPEGFAGKSCEIDTRA 90 (91)
T ss_dssp CEEEECCTTCBSSSCCBCSSC
T ss_pred CeEeECCCCCcCCcCCcCCCC
Confidence 999999999999999988876
No 127
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.46 E-value=1.7e-14 Score=186.75 Aligned_cols=250 Identities=23% Similarity=0.406 Sum_probs=96.6
Q ss_pred CCCCCCEEeccCCCceeecCCCccCCCCccCcccCCCCCCCCCCeeccCCCCceeeCCCCCCcCCCccccccCCCCCCCC
Q psy6358 1135 PCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHR 1214 (1945)
Q Consensus 1135 pC~~~g~C~~~~gs~~C~C~~G~~G~~C~~~~d~C~~~~C~~gg~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~ 1214 (1945)
|+.....+......++|.|++||+|.+|+..++.+...|+.. ++|......+.|.|+. .+..|+.+...+...++.+
T Consensus 265 p~~g~~~~~~g~~~g~C~C~~G~~G~~Ce~C~~g~~~~p~~~-~~c~~~~~~~~C~C~~--~~~~C~~d~~~c~~~~~~~ 341 (525)
T 4aqs_A 265 PVDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRP-AEGRNSNACKKCNCNE--HSSSCHFDMAVFLATGNVS 341 (525)
T ss_dssp CC------CCSCCCCEECCCTTEESSSSCEECTTCCSSCCCC-CBTTBCCCCCCCCCTT--SCSEEEECHHHHHHTTSSC
T ss_pred CcCCcccCCCCCcCccccCcCCCcCCCCcCCCCccCCCccCC-CcccCCCcccccccCC--CCCCCCCCcccccccCccC
Confidence 444444555555667777777777777776666666666643 4555555555666643 2444544433333333332
Q ss_pred -CEEecCCCCceecccCCcCCCccccccCcCCCCCCCCCCccccCCCCceeecCCCCCC--CCccccCccccCCCCCCCC
Q psy6358 1215 -GECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSG--TNCEININECYSNPCRNGA 1291 (1945)
Q Consensus 1215 -g~C~~~~~s~~C~C~~Gy~G~~C~~~i~~C~~~pC~~~g~C~~~~g~y~C~C~~G~~G--~~C~~~i~~C~~~~C~~~~ 1291 (1945)
|.| +.|..+|+|..|+.-++.....++... . .......|.|...+.. ..|... .
T Consensus 342 gg~C--------~~C~~g~~G~~Ce~C~~g~~~~~~~~~-~--~~~~~~~C~C~~~~~~~~~~C~~~------------~ 398 (525)
T 4aqs_A 342 GGVC--------DNCQHNTMGRNCEQCKPFYFQHPERDI-R--DPNLCEPCTCDPAGSENGGICDGY------------T 398 (525)
T ss_dssp CEEE--------ESCCTTEESTTSCEECTTEEECSSSCT-T--CTTCEEECCCCTTTBSGGGCCCCS------------C
T ss_pred CCcc--------cCCCCCCCCCCcccccCcccccCCCCC-C--CCCCCcCCCCCCCCCCCCccccCC------------C
Confidence 222 356666666655432211111111100 0 0011122333322211 111100 0
Q ss_pred eeecCCCCeeecCCCCccCCccccCCCCCCCCCCCCCCeeeeCCCCceeeCCCCccCCCCcccCCCCCCCCCCCCCEeec
Q psy6358 1292 KCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCED 1371 (1945)
Q Consensus 1292 ~C~~~~~~~~C~C~~G~~G~~C~~~i~~C~~~~C~~~g~C~~~~~~~~C~C~~Gy~G~~C~~~~deC~~~~C~~~g~C~~ 1371 (1945)
..........|.|.++|.|..|+ .|++||+|..|. ..+.|.+.+|.++++|.+
T Consensus 399 ~~~~~~~~~~C~C~~g~~G~~C~--------------------------~C~~Gy~G~~c~-~~~~C~~C~C~~~gtc~~ 451 (525)
T 4aqs_A 399 DFSVGLIAGQCRCKLHVEGERCD--------------------------VCKEGFYDLSAE-DPYGCKSCACNPLGTIPG 451 (525)
T ss_dssp BGGGTBCSSCCCBCTTEETTTTC--------------------------EECTTEECCCTT-STTSSEECCCCTTTBCCS
T ss_pred CCCcCCCCCccCCCCCCCCCccc--------------------------CCCCCCcCCCCC-CCCCCccCCCCCCceecC
Confidence 00011122334455555444442 577888887775 455676666766666654
Q ss_pred C----CCCceeeCCCCCCCCCCccCCCCCCCCCCCCCCeEeeCCCCceeecCCCCcCCCCcccCCCCCCCCCCCCCEEee
Q psy6358 1372 G----LNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCID 1447 (1945)
Q Consensus 1372 ~----~g~~~C~C~~Gy~G~~C~~~id~C~~~pC~n~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~ 1447 (1945)
. ..++.|.|++||+|.+|+ +|++||+|... ++++|.+.+|.+++.+.+
T Consensus 452 ~~~Cd~~tg~C~C~~g~~G~~Ce--------------------------~C~~G~~g~~~--~~~~C~~C~C~~~gs~~~ 503 (525)
T 4aqs_A 452 GNPCDSETGYCYCKRLVTGQRCD--------------------------QCLPQHWGLSN--DLDGCRPCDCDLGGALNN 503 (525)
T ss_dssp SCCBCTTTCCBCBCTTCCSTTTC--------------------------C------------------------------
T ss_pred CCcccCCCCEEECCCCCcCCCcc--------------------------cCCCCccCCCC--CCCCCcCCCCCCCCccCC
Confidence 3 235578888888888774 15566766543 467899899999988876
Q ss_pred c--CCCceeeccCCCCC-ccC
Q psy6358 1448 L--VNAYKCVCAKAGNH-RCD 1465 (1945)
Q Consensus 1448 ~--~~~~~C~C~~~~~~-~c~ 1465 (1945)
. ...++|.|+.++.| .|+
T Consensus 504 ~C~~~tG~C~C~~G~~G~~Ce 524 (525)
T 4aqs_A 504 SCSEDSGQCSCLPHMIGRQCN 524 (525)
T ss_dssp ---------------------
T ss_pred ccCCCCCeeECCCCCcCCCCC
Confidence 5 34568999998765 354
No 128
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.46 E-value=3.9e-14 Score=167.89 Aligned_cols=113 Identities=18% Similarity=0.133 Sum_probs=96.3
Q ss_pred Cce-eeeecccCCCccccCcHHHHHHHHHCCCC-------ccc----cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Q psy6358 1805 SYL-CECAKGYEGRDCLINTDDCASYLINADAD-------INV----PDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE 1872 (1945)
Q Consensus 1805 G~t-Lhlaa~~~g~tpL~~~~~~v~~Ll~~gad-------vn~----~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~ 1872 (1945)
|.| ||+|+.... .++.++|++||++|++ ++. +|..|+||||+|++.++.++|++||++|++++.
T Consensus 54 g~tpL~~A~~~~~----~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 54 GKTCLLKAMLNLH----NGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp CCCHHHHHHHSCB----TTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCHHHHHHHHHh----cCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 444 777764300 1577999999999876 343 567899999999999999999999999999753
Q ss_pred -----------------------------CCHHHHHHHHH---cCCCCCCcCCCCCCHHHHHHHcCc---------HHHH
Q psy6358 1873 -----------------------------GSYGACKALLD---NFANREITDHMDRLPRDVASERLH---------HDIV 1911 (1945)
Q Consensus 1873 -----------------------------g~~~~v~~LL~---~Gad~~~~d~~G~TpL~~A~~~g~---------~eiv 1911 (1945)
++.++|++||+ +|++++.+|..|+||||+|++.++ .+||
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v 209 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMY 209 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHH
Confidence 67899999999 999999999999999999999998 8999
Q ss_pred HHHHhCCCCC
Q psy6358 1912 RLLDEHIPRS 1921 (1945)
Q Consensus 1912 ~~Ll~~ga~~ 1921 (1945)
++|+++|++.
T Consensus 210 ~~Ll~~ga~~ 219 (273)
T 2pnn_A 210 NEILILGAKL 219 (273)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHhhhhc
Confidence 9999998654
No 129
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.43 E-value=2.8e-14 Score=146.57 Aligned_cols=100 Identities=27% Similarity=0.702 Sum_probs=71.1
Q ss_pred CCCCCCCCCCCCCCeeeeC-CCCceeeCCCCccCCCCcccCCC----CCCCCCCCCCEeecCCCCceeeCCCCCC---CC
Q psy6358 1316 NINECASNPCANGGVCVDL-IDGFKCECPRGYYDARCLSDVDE----CASDPCLNGGTCEDGLNQFICHCKPGYG---GK 1387 (1945)
Q Consensus 1316 ~i~~C~~~~C~~~g~C~~~-~~~~~C~C~~Gy~G~~C~~~~de----C~~~~C~~~g~C~~~~g~~~C~C~~Gy~---G~ 1387 (1945)
+||+|+++||.+ +|+++ .++|+|.|++||+|..+ ++++ |...||. ++|++ .++|+|.|++||+ |.
T Consensus 3 dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~--~~~~C~~~C~~~~C~--~~C~~-~~~y~C~C~~Gy~~~~g~ 75 (118)
T 1dx5_I 3 PVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPH--EPHRCQMFCNQTACP--ADCDP-NTQASCECPEGYILDDGF 75 (118)
T ss_dssp CCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETT--EEEEEEECCCSSEEE--CEECT-TSTTCEECCTTEEEETTT
T ss_pred ccccCCCCCCCC--CCCCCCCCCEEeECCCCccccCC--CCCccccccCCCCCC--CcccC-CCCeEeECCCCccCCCCC
Confidence 567777777763 77777 67777777777776643 2333 3344454 67877 4778888888888 77
Q ss_pred CCccCCCCCCC-CCCCCCCeEeeCCCCceeecCCCCcCC
Q psy6358 1388 RCEFDIDECGS-NPCQHGGICTDHLNGYTCECQIGYTGI 1425 (1945)
Q Consensus 1388 ~C~~~id~C~~-~pC~n~g~C~~~~~~~~C~C~~G~~G~ 1425 (1945)
.|+ +||+|.. +|| +++|+++.++|+|.|++||+|.
T Consensus 76 ~C~-dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 76 ICT-DIDECENGGFC--SGVCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp EEE-ECCHHHHCSSC--SSEEEECSSSEEEEECSSSSCE
T ss_pred ccc-cccccCCCCCC--cCeEEeCCCCEEEECCCCCccC
Confidence 884 7888876 788 5788888888888888888764
No 130
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.41 E-value=2.1e-14 Score=160.38 Aligned_cols=108 Identities=13% Similarity=-0.008 Sum_probs=90.9
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccC-CCCCCHHHHHHHcCCH----HHHHHHHHCCCCCCC----------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPD-NSGKTALHWAAAVNNI----DAVNILLSHGVNPRE---------- 1872 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d-~~G~T~Lh~Aa~~g~~----~iv~~LL~~Gadvn~---------- 1872 (1945)
||.|++. ++.+.++.|++.+ ++.++ ..|+||||+|+..++. ++|++||++|||||.
T Consensus 10 l~~Aa~~-------g~~~~~~~l~~~~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh 80 (186)
T 3t8k_A 10 VSAAAML-------GTYEDFLELFEKG--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFF 80 (186)
T ss_dssp HHHHHHH-------SCHHHHHHHHHHS--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHH
T ss_pred HHHHHHc-------CCHHHHHHHHhcC--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence 5555555 7888899999876 45555 7899999999999975 599999999999987
Q ss_pred -----CC------HHHHHHHHHcCCCCCCcCCCCC-CHHHHHHHc-----CcHHHHHHHHh-CCCCCccc
Q psy6358 1873 -----GS------YGACKALLDNFANREITDHMDR-LPRDVASER-----LHHDIVRLLDE-HIPRSPQM 1924 (1945)
Q Consensus 1873 -----g~------~~~v~~LL~~Gad~~~~d~~G~-TpL~~A~~~-----g~~eiv~~Ll~-~ga~~~~~ 1924 (1945)
++ .++|++||++|||++++|..|+ ||||+|+.. ++.++|++|++ +|++....
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~ 150 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIK 150 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCC
T ss_pred HHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCccc
Confidence 33 5789999999999999999999 999999984 45679999999 99876543
No 131
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.41 E-value=3.3e-13 Score=136.91 Aligned_cols=82 Identities=27% Similarity=0.400 Sum_probs=75.7
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDNFAN 1887 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~g~~~~v~~LL~~Gad 1887 (1945)
||+|+.. ++.++|++||++|++++.+|..|+||||+|++.++.++|++||++| |+
T Consensus 28 L~~A~~~-------g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g------------------a~ 82 (110)
T 2zgd_A 28 LLEAARA-------GQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG------------------AD 82 (110)
T ss_dssp HHHHHHH-------TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT------------------CC
T ss_pred HHHHHHc-------CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC------------------CC
Confidence 6766665 7899999999999999999999999999999999999998888777 77
Q ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHH
Q psy6358 1888 REITDHMDRLPRDVASERLHHDIVRLL 1914 (1945)
Q Consensus 1888 ~~~~d~~G~TpL~~A~~~g~~eiv~~L 1914 (1945)
++.+|..|+||||+|+..++.+++++|
T Consensus 83 ~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 83 VXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 788999999999999999999999998
No 132
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.37 E-value=3.9e-13 Score=138.93 Aligned_cols=64 Identities=17% Similarity=0.180 Sum_probs=56.0
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q psy6358 1841 DNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPR 1920 (1945)
Q Consensus 1841 d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 1920 (1945)
+..|.||||+|++.++.++|++||++| ++++.+|..|+||||+|+..++.++|++|+++|++
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~------------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 65 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKG------------------EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD 65 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTT------------------CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcC------------------CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 456889999999999999999988877 67778999999999999999999999999999986
Q ss_pred Cc
Q psy6358 1921 SP 1922 (1945)
Q Consensus 1921 ~~ 1922 (1945)
..
T Consensus 66 ~~ 67 (123)
T 3aaa_C 66 IN 67 (123)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 133
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.36 E-value=1.5e-12 Score=150.43 Aligned_cols=99 Identities=15% Similarity=0.070 Sum_probs=82.4
Q ss_pred HHHHHHCCCCccccC---CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCCCC
Q psy6358 1827 ASYLINADADINVPD---NSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFANR 1888 (1945)
Q Consensus 1827 v~~Ll~~gadvn~~d---~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Gad~ 1888 (1945)
|+.||++|++++..+ ..+.||||+|++.|+.++|++||++|++++. ++.++|++||++||++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 578999999987665 4567789999999999999999999999876 8999999999999999
Q ss_pred CCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCccch
Q psy6358 1889 EITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQMV 1925 (1945)
Q Consensus 1889 ~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~~~~ 1925 (1945)
+.+|..|+||||+|+..++.++|++|+++|++.....
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~ 117 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc
Confidence 9999999999999999999999999999998876543
No 134
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.34 E-value=5.7e-13 Score=143.94 Aligned_cols=86 Identities=24% Similarity=0.198 Sum_probs=77.2
Q ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--------------CCHHHHHHHHHcCCCCCCcCCCCCC-HHHH
Q psy6358 1837 INVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------GSYGACKALLDNFANREITDHMDRL-PRDV 1901 (1945)
Q Consensus 1837 vn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~--------------g~~~~v~~LL~~Gad~~~~d~~G~T-pL~~ 1901 (1945)
++..+..|.||||+|++.|+.++|++||++|++++. ++.++|++||++|++++.+|..|+| |||+
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSCTTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 456688899999999999999999999999999765 7899999999999999999999999 9999
Q ss_pred HHHcCcHHHHHHHHhCCCCCc
Q psy6358 1902 ASERLHHDIVRLLDEHIPRSP 1922 (1945)
Q Consensus 1902 A~~~g~~eiv~~Ll~~ga~~~ 1922 (1945)
|+..++.++|++|+++|++..
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~ 105 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLD 105 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSS
T ss_pred HHHCCCHHHHHHHHHcCCCCc
Confidence 999999999999999998754
No 135
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.31 E-value=8.7e-13 Score=138.98 Aligned_cols=83 Identities=24% Similarity=0.227 Sum_probs=77.3
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Q psy6358 1841 DNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFANREITDHMDRLPRDVASER 1905 (1945)
Q Consensus 1841 d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~ 1905 (1945)
...+.||||+|++.|+.++|++||++|++++. ++.++|++||++|++++.+|..|+||||+|+..
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 45678999999999999999999999999876 889999999999999999999999999999999
Q ss_pred CcHHHHHHHHhCCCCCcc
Q psy6358 1906 LHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1906 g~~eiv~~Ll~~ga~~~~ 1923 (1945)
++.++|++|+++|++...
T Consensus 91 ~~~~~v~~Ll~~g~~~~~ 108 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNA 108 (136)
T ss_dssp TCHHHHHHHHHTTCCTTC
T ss_pred CCHHHHHHHHHcCCCCcC
Confidence 999999999999987543
No 136
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.29 E-value=2.3e-12 Score=132.78 Aligned_cols=81 Identities=30% Similarity=0.409 Sum_probs=76.4
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc
Q psy6358 1843 SGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFANREITDHMDRLPRDVASERLH 1907 (1945)
Q Consensus 1843 ~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~ 1907 (1945)
+|+||||+|++.++.++|++||++|++++. ++.+++++||++|++++.+|..|+||||+|+..++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 589999999999999999999999999765 88999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCcc
Q psy6358 1908 HDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1908 ~eiv~~Ll~~ga~~~~ 1923 (1945)
.++|++|+++|++...
T Consensus 81 ~~~~~~Ll~~g~~~~~ 96 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNA 96 (126)
T ss_dssp HHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHHcCCCCcc
Confidence 9999999999987543
No 137
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.29 E-value=9.6e-13 Score=160.56 Aligned_cols=97 Identities=23% Similarity=0.319 Sum_probs=89.4
Q ss_pred CcHHHHHHHHHCCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CC---HHHHHHHH
Q psy6358 1822 NTDDCASYLINADADINV-PDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GS---YGACKALL 1882 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~-~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~---~~~v~~LL 1882 (1945)
...+++++|++.|+|||. +|.+|+||||+|++.|+.++|++||++||+++. ++ .++++.||
T Consensus 108 ~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll 187 (327)
T 1sw6_A 108 LLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALL 187 (327)
T ss_dssp HHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHH
T ss_pred hHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHH
Confidence 467899999999999999 899999999999999999999999999999877 33 57788899
Q ss_pred HcC-CCCCCcCCCCCCHHHHHHH----cCcHHHHHHHHhCC
Q psy6358 1883 DNF-ANREITDHMDRLPRDVASE----RLHHDIVRLLDEHI 1918 (1945)
Q Consensus 1883 ~~G-ad~~~~d~~G~TpL~~A~~----~g~~eiv~~Ll~~g 1918 (1945)
+++ ++++.+|..|+||||+|+. .++.++|++|++++
T Consensus 188 ~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~ 228 (327)
T 1sw6_A 188 DYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDIL 228 (327)
T ss_dssp HHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHH
T ss_pred HhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHH
Confidence 887 8899999999999999999 89999999999874
No 138
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.27 E-value=2.6e-13 Score=168.09 Aligned_cols=105 Identities=15% Similarity=0.093 Sum_probs=87.2
Q ss_pred eeeecccCCCccccCcHHHHHHHHHCCCCc---cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CC--------
Q psy6358 1808 CECAKGYEGRDCLINTDDCASYLINADADI---NVPDNSGKTALHWAAAVNNIDAVNILLSHGVN-----PR-------- 1871 (1945)
Q Consensus 1808 Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadv---n~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gad-----vn-------- 1871 (1945)
||+|+.. ++.++|++||+.|+.. +..+..++||||+||+.|+.++|++||++||+ ++
T Consensus 96 Lh~Aa~~-------G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh 168 (376)
T 2aja_A 96 CFVAAIT-------GCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFR 168 (376)
T ss_dssp HHHHHHH-------CCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHH
T ss_pred HHHHHHc-------CCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHH
Confidence 6666665 7999999999999832 23445678999999999999999999999975 22
Q ss_pred ----CCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHH-HcCcHHHHHHHHhCCC
Q psy6358 1872 ----EGSYGACKALLDNFANREI--TDHMDRLPRDVAS-ERLHHDIVRLLDEHIP 1919 (1945)
Q Consensus 1872 ----~g~~~~v~~LL~~Gad~~~--~d~~G~TpL~~A~-~~g~~eiv~~Ll~~ga 1919 (1945)
.|+.++|++||++|++++. +|..|+||||+|+ ..||.+||++|+++|+
T Consensus 169 ~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga 223 (376)
T 2aja_A 169 LAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV 223 (376)
T ss_dssp HHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH
T ss_pred HHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC
Confidence 1999999999999999988 8999999999999 9999999999998764
No 139
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.25 E-value=1.7e-12 Score=148.77 Aligned_cols=86 Identities=20% Similarity=0.130 Sum_probs=80.1
Q ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHc-CCCCCCcCCCCCCHHHH
Q psy6358 1838 NVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDN-FANREITDHMDRLPRDV 1901 (1945)
Q Consensus 1838 n~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~-Gad~~~~d~~G~TpL~~ 1901 (1945)
+.++..|+||||+|++.|+.++|++||++|++++. ++.++|++||++ |++++++|..|+||||+
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~ 146 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHA 146 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHH
T ss_pred cccccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHH
Confidence 34577899999999999999999999999999875 899999999999 99999999999999999
Q ss_pred HHHcCcHHHHHHHHhCCCCCcc
Q psy6358 1902 ASERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1902 A~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
|+..++.++|++|+++|++...
T Consensus 147 A~~~~~~~~v~~Ll~~ga~~~~ 168 (222)
T 3ehr_A 147 AAWKGYADIVQLLLAKGARTDL 168 (222)
T ss_dssp HHHHTCHHHHHHHHHHTCCSCC
T ss_pred HHHcCCHHHHHHHHHcCCCCcc
Confidence 9999999999999999987544
No 140
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.24 E-value=2.4e-12 Score=154.98 Aligned_cols=94 Identities=19% Similarity=0.168 Sum_probs=76.0
Q ss_pred Cce-eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----------
Q psy6358 1805 SYL-CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE----------- 1872 (1945)
Q Consensus 1805 G~t-Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~----------- 1872 (1945)
|.| ||+|+.... .+++++|++||++|++||.+|.+|+||||+|+..++.++|++||++||++++
T Consensus 190 g~t~Lh~A~~~~~----~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~ 265 (301)
T 2b0o_E 190 EELVLHLAVKVAN----QASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDI 265 (301)
T ss_dssp EECHHHHHHHTCC----TTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHH
T ss_pred CccHHHHHHHhcc----cCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 444 777776411 1578999999999999999999999999999999999999999999999876
Q ss_pred ----CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcH
Q psy6358 1873 ----GSYGACKALLDNFANREITDHMDRLPRDVASERLHH 1908 (1945)
Q Consensus 1873 ----g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~ 1908 (1945)
++.++|++||++|++ .|.||||+|++.|+.
T Consensus 266 A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 266 ARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 889999999999987 579999999998874
No 141
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.23 E-value=1.3e-12 Score=145.29 Aligned_cols=82 Identities=18% Similarity=0.078 Sum_probs=76.7
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHH
Q psy6358 1841 DNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFANREITD-HMDRLPRDVASE 1904 (1945)
Q Consensus 1841 d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Gad~~~~d-~~G~TpL~~A~~ 1904 (1945)
+..|+||||+|++.|+.++|++||+ |++++. ++.++|++||++|++++.+| ..|+||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 4578999999999999999999999 999876 89999999999999999999 899999999999
Q ss_pred cCcHHHHHHHHhCCCCCcc
Q psy6358 1905 RLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1905 ~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
.++.++|++|+++|++...
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~ 138 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEV 138 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTC
T ss_pred cCcHHHHHHHHHcCCCCcC
Confidence 9999999999999987654
No 142
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.17 E-value=2.3e-11 Score=124.10 Aligned_cols=96 Identities=27% Similarity=0.579 Sum_probs=68.6
Q ss_pred cCCCCCCCC--------CCCCCeecCCCCceeeecCCCCCCCcCccCC--CccCCCCCCCCCCCeeeccCCCeEEecCCC
Q psy6358 264 NIDDCPGNL--------CQNGATCMDGINKYSCLCLATYTGDLCEQDV--DECSIRPSVCHNGATCTNSVGGFSCICVNG 333 (1945)
Q Consensus 264 ~~d~C~~~~--------C~~~~~C~~~~~~y~C~C~~G~~G~~C~~d~--deC~~~~~~C~~~~~C~n~~g~~~C~C~~G 333 (1945)
|+|+|..+| |.++|+|+++.++|+|.|++||+|..|+..+ +||...+..|.+ +|+|+.|+|+|.|++|
T Consensus 5 d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~g~y~C~C~~G 82 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEVGWRRCSCAPG 82 (114)
T ss_dssp ---CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS--EEEECSSSEEEECCTT
T ss_pred ecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCCCCEEeECCCC
Confidence 678888888 9999999999999999999999999997543 478766666765 8999999999999999
Q ss_pred cccCCCCCCCCCCCCCCCCCCCeeccCC
Q psy6358 334 WTGPDCSLNIDDCAGAACFNGATCIDRV 361 (1945)
Q Consensus 334 y~G~~C~~~id~C~~~~C~~~~~C~~~~ 361 (1945)
|+|......-.+....||.++++|+...
T Consensus 83 ~~~~~~g~~C~~~~~~pC~~~~~~i~~~ 110 (114)
T 1aut_L 83 YKLGDDLLQCHPAVKFPCGRPWKRMEKK 110 (114)
T ss_dssp EEECTTSSCEEECSSSCTTCCC------
T ss_pred eeECCCCCccCcCcccCCCCCCccCCCC
Confidence 9964332221223446888888777543
No 143
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.14 E-value=3.4e-11 Score=115.11 Aligned_cols=70 Identities=34% Similarity=0.901 Sum_probs=63.5
Q ss_pred cCCCCcCC-CCCCCCCEeeecCCCceEEeCCCCcc--CCCcccCCCCccc-CCCCCCCCeeeeCCCCeeeeccCCcCCC
Q psy6358 627 YFGYDCDS-NPCQNGGFCRSKEGGGYRCDCPPGAT--GTHCELDSRNECY-SNPCQHAGTCEDRIADYACYCLPMWNGK 701 (1945)
Q Consensus 627 ~~~~eC~~-~pC~n~g~C~~~~~~~y~C~C~~G~~--G~~Ce~~~~~~C~-~~pC~~~~~C~~~~~~y~C~C~~G~~G~ 701 (1945)
++||||.+ +||+| |+|+++. ++|+|.|++||+ |..|+ + ||||. ++||.++ +|+++.++|+|.|++||+|.
T Consensus 3 ~dideC~~~~~C~~-g~C~n~~-g~y~C~C~~Gy~~~g~~C~-d-ideC~~~~~C~~~-~C~n~~g~y~C~C~~G~~g~ 76 (82)
T 1emn_A 3 VDMDECKEPDVCKH-GQCINTD-GSYRCECPFGYILAGNECV-D-TDECSVGNPCGNG-TCKNVIGGFECTCEEGFEPG 76 (82)
T ss_dssp CCCCSSSSTTSCSS-SEECCCS-SCCCEECCTTEEEETTEEE-E-CCGGGTCCTTSSS-CEEECSSSEEECCSSSSCCC
T ss_pred CccccCCCCCCcCC-CEEEecC-CCEEEECCCCeECCCCccC-C-cccccCCCCCCCC-EeECCCCCEEeECCCCeEeC
Confidence 37899986 89987 8999998 899999999997 89996 4 99998 7899974 99999999999999999985
No 144
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.10 E-value=8e-11 Score=137.21 Aligned_cols=81 Identities=19% Similarity=0.091 Sum_probs=76.0
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------CCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHc
Q psy6358 1842 NSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------------GSYGACKALLDNFANREITD-HMDRLPRDVASER 1905 (1945)
Q Consensus 1842 ~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~---------------g~~~~v~~LL~~Gad~~~~d-~~G~TpL~~A~~~ 1905 (1945)
..|+||||+|++.|+.++|++||+ |++++. ++.++|++||++|++++.+| ..|+||||+|+..
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 458999999999999999999999 999886 89999999999999999999 8899999999999
Q ss_pred CcHHHHHHHHhCCCCCcc
Q psy6358 1906 LHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1906 g~~eiv~~Ll~~ga~~~~ 1923 (1945)
++.++|++|+++|++...
T Consensus 122 g~~~~v~~Ll~~ga~~~~ 139 (244)
T 3ui2_A 122 VRPEVVEALVELGADIEV 139 (244)
T ss_dssp TCHHHHHHHHHTTCCTTC
T ss_pred CCHHHHHHHHHCCCCCCC
Confidence 999999999999987643
No 145
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.09 E-value=9.2e-11 Score=112.11 Aligned_cols=60 Identities=32% Similarity=0.899 Sum_probs=39.7
Q ss_pred CCCCCCCCC-CCCCCCCeeccCCCCceeecCCCcc--CCcccccccccC-CCCCCCCeeeecCCCe
Q psy6358 72 CELQDHCAS-SPCRNGAVCTSLEDTYECDCAPGFV--GQTCSEDIIECV-DDPCVHGECFNTHGSY 133 (1945)
Q Consensus 72 C~~~~~C~~-~~C~n~g~C~~~~~~~~C~C~~Gf~--G~~C~~di~eC~-~~~C~~g~C~n~~gs~ 133 (1945)
|+++|+|.+ +||.+ |+|+++.++|+|.|++||+ |..| +||+||. ..||.+|+|+|+.|+|
T Consensus 2 C~dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C-~dideC~~~~~C~~~~C~n~~g~y 65 (82)
T 1emn_A 2 AVDMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNEC-VDTDECSVGNPCGNGTCKNVIGGF 65 (82)
T ss_dssp CCCCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEE-EECCGGGTCCTTSSSCEEECSSSE
T ss_pred CCccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCcc-CCcccccCCCCCCCCEeECCCCCE
Confidence 667777775 67765 6777777777777777776 7777 5777776 4555555444444443
No 146
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.09 E-value=2.1e-10 Score=148.11 Aligned_cols=86 Identities=19% Similarity=0.123 Sum_probs=69.5
Q ss_pred Cce-eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----------
Q psy6358 1805 SYL-CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE----------- 1872 (1945)
Q Consensus 1805 G~t-Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~----------- 1872 (1945)
|.| ||+|+... ..++.++|++||++|||||++|.+|+||||+|++.|+.++|++||++|||+++
T Consensus 171 g~t~Lh~A~~~a----~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 246 (497)
T 3lvq_E 171 EELVLHLAVKVA----NQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDI 246 (497)
T ss_dssp CBCHHHHHHHTC----CTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHH
T ss_pred cchHHHHHHHhc----ccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 455 88884310 12688999999999999999999999999999999999999999999999887
Q ss_pred ----CCHHHHHHHHHcCCCCCCcCCC
Q psy6358 1873 ----GSYGACKALLDNFANREITDHM 1894 (1945)
Q Consensus 1873 ----g~~~~v~~LL~~Gad~~~~d~~ 1894 (1945)
++.++|++||++||+++.....
T Consensus 247 A~~~~~~~~~~~Ll~~ga~~~~~~~h 272 (497)
T 3lvq_E 247 ARKKHHKECEELLEQAQAGTFAFPLH 272 (497)
T ss_dssp HHHTTCHHHHHHHHHTCC--------
T ss_pred HHHcCCHHHHHHHHHhCCCCCCCcce
Confidence 8999999999999999875333
No 147
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.08 E-value=5.8e-11 Score=121.12 Aligned_cols=91 Identities=30% Similarity=0.762 Sum_probs=62.9
Q ss_pred ccCCCCCCCC--------CCCCCEeecCCCCceeeCCCCCCCCCCccCC--CCCCCC--CCCCCCeEeeCCCCceeecCC
Q psy6358 1353 SDVDECASDP--------CLNGGTCEDGLNQFICHCKPGYGGKRCEFDI--DECGSN--PCQHGGICTDHLNGYTCECQI 1420 (1945)
Q Consensus 1353 ~~~deC~~~~--------C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~i--d~C~~~--pC~n~g~C~~~~~~~~C~C~~ 1420 (1945)
.|+|+|.++| |.++|+|+++.++|+|.|++||+|..|+..+ ++|..+ +|.+ +|+++.++|+|.|++
T Consensus 4 ~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~g~y~C~C~~ 81 (114)
T 1aut_L 4 VDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEVGWRRCSCAP 81 (114)
T ss_dssp ----CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS--EEEECSSSEEEECCT
T ss_pred eecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCCCCEEeECCC
Confidence 3677888877 8888999988889999999999999998543 477653 3443 899999999999999
Q ss_pred CCcC----CCCcccCCCCCCCCCCCCCEEeecC
Q psy6358 1421 GYTG----INCEINIDDCAFKPCRHGGTCIDLV 1449 (1945)
Q Consensus 1421 G~~G----~~C~~~~~~C~~~~C~~~g~C~~~~ 1449 (1945)
||+| ..|+. ....||.++++|+...
T Consensus 82 G~~~~~~g~~C~~----~~~~pC~~~~~~i~~~ 110 (114)
T 1aut_L 82 GYKLGDDLLQCHP----AVKFPCGRPWKRMEKK 110 (114)
T ss_dssp TEEECTTSSCEEE----CSSSCTTCCC------
T ss_pred CeeECCCCCccCc----CcccCCCCCCccCCCC
Confidence 9984 45553 2346888888777543
No 148
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.08 E-value=3.3e-11 Score=116.35 Aligned_cols=70 Identities=40% Similarity=1.050 Sum_probs=43.2
Q ss_pred CCCccCCCCCCCCCCCeeeccCCCeEEecCCCcc-----cCCCCCCCCCCCCCC--CCCCCeeccCCCCeeeeCCCCCcc
Q psy6358 302 DVDECSIRPSVCHNGATCTNSVGGFSCICVNGWT-----GPDCSLNIDDCAGAA--CFNGATCIDRVGSFYCQCTPGKTG 374 (1945)
Q Consensus 302 d~deC~~~~~~C~~~~~C~n~~g~~~C~C~~Gy~-----G~~C~~~id~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~G 374 (1945)
|||||+..+++|.++ +|+|+.|+|+|.|++||+ |..|+ +||||+..| |. +++|+++.++|+|.|++||++
T Consensus 2 dideC~~~~~~C~~g-~C~n~~g~y~C~C~~Gy~~~~~~g~~C~-dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~ 78 (86)
T 1lmj_A 2 DIDECRISPDLCGRG-QCVNTPGDFECKCDEGYESGFMMMKNCM-DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQL 78 (86)
T ss_dssp CCCTTTTCSSTTTTS-CEEEETTEEEECCCSSEEECTTTSSSEE-ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCC
T ss_pred ccccccCCCCCCCCC-EEECCCCCEEeeCCCCcCccCCCCCccC-CcccccCCCCcCC-CCEeEcCCCCEEEECcCCccc
Confidence 566666655566543 666666666666666666 44553 666665554 43 356666666666666666654
No 149
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.08 E-value=5.8e-11 Score=114.68 Aligned_cols=69 Identities=30% Similarity=0.794 Sum_probs=61.9
Q ss_pred CCCCcCCCC--CCCCCEeeecCCCceEEeCCCCcc-----CCCcccCCCCcccCCC--CCCCCeeeeCCCCeeeeccCCc
Q psy6358 628 FGYDCDSNP--CQNGGFCRSKEGGGYRCDCPPGAT-----GTHCELDSRNECYSNP--CQHAGTCEDRIADYACYCLPMW 698 (1945)
Q Consensus 628 ~~~eC~~~p--C~n~g~C~~~~~~~y~C~C~~G~~-----G~~Ce~~~~~~C~~~p--C~~~~~C~~~~~~y~C~C~~G~ 698 (1945)
+||||.++| |.++ +|+++. ++|+|.|++||+ |..|+ + ||||.++| |. +++|+++.++|+|.|++||
T Consensus 2 dideC~~~~~~C~~g-~C~n~~-g~y~C~C~~Gy~~~~~~g~~C~-d-ideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~ 76 (86)
T 1lmj_A 2 DIDECRISPDLCGRG-QCVNTP-GDFECKCDEGYESGFMMMKNCM-D-IDECQRDPLLCR-GGVCHNTEGSYRCECPPGH 76 (86)
T ss_dssp CCCTTTTCSSTTTTS-CEEEET-TEEEECCCSSEEECTTTSSSEE-E-CCHHHHCSSTTT-TSEEEEETTEEEEESCTTS
T ss_pred ccccccCCCCCCCCC-EEECCC-CCEEeeCCCCcCccCCCCCccC-C-cccccCCCCcCC-CCEeEcCCCCEEEECcCCc
Confidence 789999876 9875 999999 899999999998 78898 4 99999887 65 5799999999999999999
Q ss_pred CCC
Q psy6358 699 NGK 701 (1945)
Q Consensus 699 ~G~ 701 (1945)
++.
T Consensus 77 ~~~ 79 (86)
T 1lmj_A 77 QLS 79 (86)
T ss_dssp CCC
T ss_pred ccC
Confidence 985
No 150
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.07 E-value=6.3e-11 Score=115.86 Aligned_cols=63 Identities=32% Similarity=0.453 Sum_probs=56.1
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCc
Q psy6358 1843 SGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSP 1922 (1945)
Q Consensus 1843 ~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 1922 (1945)
+|+||||+|++.++.++|++||++| ++++.+|..|+||||+|+..++.++|++|+++|++..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g------------------~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 62 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAG------------------ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 62 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT------------------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC------------------CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 4899999999999999999888777 6778899999999999999999999999999998765
Q ss_pred c
Q psy6358 1923 Q 1923 (1945)
Q Consensus 1923 ~ 1923 (1945)
.
T Consensus 63 ~ 63 (93)
T 1n0q_A 63 A 63 (93)
T ss_dssp C
T ss_pred c
Confidence 4
No 151
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.07 E-value=6.4e-11 Score=125.77 Aligned_cols=76 Identities=42% Similarity=1.017 Sum_probs=47.6
Q ss_pred cCCCCCCCCCCCCCEeecCCCCceeeCCCCCCCCCCccCCCCCCCCCCCCCC---eEeeCCC-CceeecCCCCc----CC
Q psy6358 1354 DVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGG---ICTDHLN-GYTCECQIGYT----GI 1425 (1945)
Q Consensus 1354 ~~deC~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~id~C~~~pC~n~g---~C~~~~~-~~~C~C~~G~~----G~ 1425 (1945)
++|+|.++||.++|+|+++.++|+|.|++||+|.+|+.++++|.+.++.+++ +|++..+ +|+|.|++||+ |.
T Consensus 46 did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~ 125 (142)
T 2c4f_L 46 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGV 125 (142)
T ss_dssp TCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSS
T ss_pred ccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCC
Confidence 5666666666666666666666666666666666666545555444555555 6666666 66666666666 66
Q ss_pred CCcc
Q psy6358 1426 NCEI 1429 (1945)
Q Consensus 1426 ~C~~ 1429 (1945)
.|+.
T Consensus 126 ~C~~ 129 (142)
T 2c4f_L 126 SCTP 129 (142)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 6653
No 152
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.05 E-value=7.4e-11 Score=114.13 Aligned_cols=76 Identities=36% Similarity=0.879 Sum_probs=44.1
Q ss_pred CCCCCCCCC--CCCCCeeccCCCCeeeeCCCCCc----cCccCCCCcccCCCCCCCCcccCCCCcCCceeeecCCCCCCC
Q psy6358 342 NIDDCAGAA--CFNGATCIDRVGSFYCQCTPGKT----GLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGV 415 (1945)
Q Consensus 342 ~id~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~----G~~C~~~d~C~~~~C~~~~~C~~~~~~~g~~~C~C~~Gy~G~ 415 (1945)
+||||+..| | ++++|+++.++|+|.|++||+ |..|+++|+|.++||+ ++|.+.+ |+|+|.|+ ||.|.
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~C~--~~C~n~~---g~y~C~C~-g~~G~ 74 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCA--QLCVNYP---GGYTCYCD-GKKGF 74 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSCCS--SEECCCS---SSCCEECC-SSSCC
T ss_pred ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCCCC--CEEEccC---CCEEEECC-CCcCC
Confidence 455555554 5 555566655666666666665 5566666666666665 4666543 66666666 55665
Q ss_pred CCCCCCccc
Q psy6358 416 NCSEDINEC 424 (1945)
Q Consensus 416 ~C~~d~~eC 424 (1945)
.++.++++|
T Consensus 75 ~~~~~~~~C 83 (87)
T 1z6c_A 75 KLAQDQKSC 83 (87)
T ss_dssp BCCTTSSSC
T ss_pred cccCCCCcc
Confidence 555555444
No 153
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.05 E-value=4.9e-11 Score=115.42 Aligned_cols=76 Identities=42% Similarity=0.999 Sum_probs=46.8
Q ss_pred cCCCCCCCC--CCCCCEeecCCCCceeeCCCCCC----CCCCccCCCCCCCCCCCCCCeEeeCCCCceeecCCCCcCCCC
Q psy6358 1354 DVDECASDP--CLNGGTCEDGLNQFICHCKPGYG----GKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINC 1427 (1945)
Q Consensus 1354 ~~deC~~~~--C~~~g~C~~~~g~~~C~C~~Gy~----G~~C~~~id~C~~~pC~n~g~C~~~~~~~~C~C~~G~~G~~C 1427 (1945)
|||||+.+| | ++++|+++.++|+|.|++||+ |..|+ +||+|.++||+ ++|+++.++|+|.|+ ||.|..+
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~-dideC~~~~C~--~~C~n~~g~y~C~C~-g~~G~~~ 76 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSENMCA--QLCVNYPGGYTCYCD-GKKGFKL 76 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEE-CCCHHHHSCCS--SEECCCSSSCCEECC-SSSCCBC
T ss_pred ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCC-CcCeeCCCCCC--CEEEccCCCEEEECC-CCcCCcc
Confidence 456666555 5 556666666666666666665 56664 66666666665 466666666666666 6666666
Q ss_pred cccCCCC
Q psy6358 1428 EINIDDC 1434 (1945)
Q Consensus 1428 ~~~~~~C 1434 (1945)
+.+...|
T Consensus 77 ~~~~~~C 83 (87)
T 1z6c_A 77 AQDQKSC 83 (87)
T ss_dssp CTTSSSC
T ss_pred cCCCCcc
Confidence 5544444
No 154
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.04 E-value=1.3e-10 Score=123.36 Aligned_cols=85 Identities=42% Similarity=0.922 Sum_probs=73.4
Q ss_pred ccCcccCCCCCCCCCCeeeeCCCCeEeeCCCCcccCCcccCCCCCCCCCCCCCC---EEecCCC-CeEEecCCCCC----
Q psy6358 943 EDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGG---TCLDEVG-DYSCLCVDGFS---- 1014 (1945)
Q Consensus 943 ~dideC~~~~~C~~~~~C~n~~gsy~C~C~~Gy~G~~C~~~~d~C~~~~C~n~g---~C~~~~g-~y~C~C~~Gy~---- 1014 (1945)
.|||+|. ++||.++++|+++.++|+|.|++||+|..|+.++++|...++.+++ +|++..+ +|+|.|++||+
T Consensus 45 ~did~C~-~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~d 123 (142)
T 2c4f_L 45 SDGDQCA-SSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLAD 123 (142)
T ss_dssp TTCCGGG-GCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTT
T ss_pred CccCcCc-CCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCC
Confidence 5899998 8999999999999999999999999999998777887666777777 9999999 99999999999
Q ss_pred CCCCCcCCCC--CCCCC
Q psy6358 1015 GKHCEVDIDE--CSSNP 1029 (1945)
Q Consensus 1015 G~~C~~dide--C~~~p 1029 (1945)
|.+|+ ++++ |...|
T Consensus 124 G~~C~-~~~e~pCg~~p 139 (142)
T 2c4f_L 124 GVSCT-PTVEYPCGKIP 139 (142)
T ss_dssp SSCEE-ESSSSCTTCCT
T ss_pred CCCCC-CCCccCCCCCC
Confidence 88996 3443 55444
No 155
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.03 E-value=4.2e-11 Score=132.54 Aligned_cols=84 Identities=32% Similarity=0.710 Sum_probs=35.6
Q ss_pred cCCCCcCCCCCCCCCEeeecCCCceEEeCCCCccCCCcccCCC-CcccCC--CCCCCCeeeeCCCCeeeeccCCcC----
Q psy6358 627 YFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSR-NECYSN--PCQHAGTCEDRIADYACYCLPMWN---- 699 (1945)
Q Consensus 627 ~~~~eC~~~pC~n~g~C~~~~~~~y~C~C~~G~~G~~Ce~~~~-~~C~~~--pC~~~~~C~~~~~~y~C~C~~G~~---- 699 (1945)
.++++|.++||+|+|+|+++. ++|+|.|++||+|.+|+.+ + ++|... +|.+ +|++..++|+|.|++||+
T Consensus 40 ~dideC~~~pC~ngg~C~n~~-g~y~C~C~~Gf~G~~Ce~~-i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l~~d 115 (195)
T 1nfu_B 40 KDGDQCETSPCQNQGKCKDGL-GEYTCTCLEGFEGKNCELF-TRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADN 115 (195)
T ss_dssp -------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTT
T ss_pred CCCcccCCCCCCCCCEeECCC-CCeeEeCCCCceecccccc-ccccccCCCCCCCC--EeECCCCCeEEECCCCceeCCC
Confidence 378999999999999999998 8999999999999999965 6 899874 5776 999999999999999999
Q ss_pred CCCCCC--CCCCCCCCC
Q psy6358 700 GKNCDL--YDPLFRGGL 714 (1945)
Q Consensus 700 G~~C~~--~~pc~~~~~ 714 (1945)
|+.|+. ..||.+...
T Consensus 116 G~~C~~~~~~PC~~~~~ 132 (195)
T 1nfu_B 116 GKACIPTGPYPCGKQTL 132 (195)
T ss_dssp SSCEEESSSSCTTCCCC
T ss_pred CCccccCCCCCCCCCCc
Confidence 889986 457766544
No 156
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.02 E-value=6.4e-11 Score=131.04 Aligned_cols=86 Identities=30% Similarity=0.723 Sum_probs=35.3
Q ss_pred ccCCCCCCCCCCCCCeecCCCCceeeecCCCCCCCcCccCC-CccCCCCCCCCCCCeeeccCCCeEEecCCCcc----cC
Q psy6358 263 ENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDV-DECSIRPSVCHNGATCTNSVGGFSCICVNGWT----GP 337 (1945)
Q Consensus 263 ~~~d~C~~~~C~~~~~C~~~~~~y~C~C~~G~~G~~C~~d~-deC~~~~~~C~~~~~C~n~~g~~~C~C~~Gy~----G~ 337 (1945)
.++|+|..+||.++|+|++..++|+|.|++||+|..|+.+| |+|...+.+|.+ +|+|+.|+|+|.|++||+ |.
T Consensus 40 ~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l~~dG~ 117 (195)
T 1nfu_B 40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGK 117 (195)
T ss_dssp -----------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSS
T ss_pred CCCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCC--EeECCCCCeEEECCCCceeCCCCC
Confidence 37899999999999999999999999999999999998777 899877677876 899999999999999999 77
Q ss_pred CCCCCCCCCCCCCCCCC
Q psy6358 338 DCSLNIDDCAGAACFNG 354 (1945)
Q Consensus 338 ~C~~~id~C~~~~C~~~ 354 (1945)
.|+..+ ..||.+.
T Consensus 118 ~C~~~~----~~PC~~~ 130 (195)
T 1nfu_B 118 ACIPTG----PYPCGKQ 130 (195)
T ss_dssp CEEESS----SSCTTCC
T ss_pred ccccCC----CCCCCCC
Confidence 886332 3466655
No 157
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.01 E-value=1.6e-10 Score=123.12 Aligned_cols=74 Identities=32% Similarity=0.820 Sum_probs=64.0
Q ss_pred cCCCCcCCCCCCCCCEeeecCCCceEEeCCCCccCCCcccCCCCcccCC--CCCCCCee-eeCCCCeeeeccCCcC----
Q psy6358 627 YFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSN--PCQHAGTC-EDRIADYACYCLPMWN---- 699 (1945)
Q Consensus 627 ~~~~eC~~~pC~n~g~C~~~~~~~y~C~C~~G~~G~~Ce~~~~~~C~~~--pC~~~~~C-~~~~~~y~C~C~~G~~---- 699 (1945)
.+||+|.++||+|+|+|+++. ++|+|.|++||+|.+|+. +++|... +|.+ +| +++.++|+|.|++||+
T Consensus 46 ~dideC~~~pC~n~g~C~~~~-~~y~C~C~~G~~G~~C~~--~deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~~d 120 (146)
T 1x7a_L 46 VDGDQCEPNPCLNGGLCKDDI-NSYECWCQVGFEGKNCEL--DATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLAPD 120 (146)
T ss_dssp ----CCSSCSSCTTCEEEECS-SCEEEECCSSEESTTTCE--ECCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEECTT
T ss_pred CCcCcCCCCCCCCCCEeECCC-CCEEEecCCCCcCCcCCC--CccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeCCC
Confidence 478999999999999999998 899999999999999984 6999975 5766 99 9999999999999999
Q ss_pred CCCCCC
Q psy6358 700 GKNCDL 705 (1945)
Q Consensus 700 G~~C~~ 705 (1945)
|+.|+.
T Consensus 121 G~~C~~ 126 (146)
T 1x7a_L 121 QKSCKP 126 (146)
T ss_dssp SSSEEE
T ss_pred CCcCCC
Confidence 777875
No 158
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.99 E-value=1.9e-10 Score=122.47 Aligned_cols=74 Identities=34% Similarity=0.815 Sum_probs=60.0
Q ss_pred cCCCCCCCCCCCCCeecCCCCceeeecCCCCCCCcCccCCCccCCCCCCCCCCCee-eccCCCeEEecCCCcc----cCC
Q psy6358 264 NIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATC-TNSVGGFSCICVNGWT----GPD 338 (1945)
Q Consensus 264 ~~d~C~~~~C~~~~~C~~~~~~y~C~C~~G~~G~~C~~d~deC~~~~~~C~~~~~C-~n~~g~~~C~C~~Gy~----G~~ 338 (1945)
+||+|..+||.++|+|++..++|+|.|++||+|..|+ ++|+|...+.+|.+ +| +|+.|+|+|.|++||+ |..
T Consensus 47 dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~-~~deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~~dG~~ 123 (146)
T 1x7a_L 47 DGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCE-LDATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLAPDQKS 123 (146)
T ss_dssp ---CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTC-EECCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEECTTSSS
T ss_pred CcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCC-CCccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeCCCCCc
Confidence 6888888899998999988888999999999998885 56888876667876 88 8888899999999998 667
Q ss_pred CC
Q psy6358 339 CS 340 (1945)
Q Consensus 339 C~ 340 (1945)
|+
T Consensus 124 C~ 125 (146)
T 1x7a_L 124 CK 125 (146)
T ss_dssp EE
T ss_pred CC
Confidence 75
No 159
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=98.99 E-value=1.8e-10 Score=142.12 Aligned_cols=84 Identities=23% Similarity=0.148 Sum_probs=76.5
Q ss_pred cCCCCCCHHHHHHHc-CCHHHHHHHHHCCCCCCC-----------------CCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Q psy6358 1840 PDNSGKTALHWAAAV-NNIDAVNILLSHGVNPRE-----------------GSYGACKALLDNFANREITDHMDRLPRDV 1901 (1945)
Q Consensus 1840 ~d~~G~T~Lh~Aa~~-g~~~iv~~LL~~Gadvn~-----------------g~~~~v~~LL~~Gad~~~~d~~G~TpL~~ 1901 (1945)
.+..+.|+||+|+.. +++++|++||++|++++. +++++|++||++||+++.+|..|+||||+
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~ 274 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHH 274 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 344567899999999 999999999999999874 88999999999999999999999999999
Q ss_pred HHHcCcHHHHHHHHhCCCCCcc
Q psy6358 1902 ASERLHHDIVRLLDEHIPRSPQ 1923 (1945)
Q Consensus 1902 A~~~g~~eiv~~Ll~~ga~~~~ 1923 (1945)
|+..++.++|++||++|++...
T Consensus 275 A~~~g~~~~v~~LL~~Gad~~~ 296 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGADLGA 296 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHcCcHHHHHHHHHCcCCCCC
Confidence 9999999999999999987543
No 160
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.96 E-value=1.3e-10 Score=121.94 Aligned_cols=74 Identities=34% Similarity=0.816 Sum_probs=29.8
Q ss_pred CCCCcCCCCCCCCCEeeecCCCceEEeCCCCccCCCcccCCC-CcccCC--CCCCCCeeeeCCCCeeeeccCCcC----C
Q psy6358 628 FGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSR-NECYSN--PCQHAGTCEDRIADYACYCLPMWN----G 700 (1945)
Q Consensus 628 ~~~eC~~~pC~n~g~C~~~~~~~y~C~C~~G~~G~~Ce~~~~-~~C~~~--pC~~~~~C~~~~~~y~C~C~~G~~----G 700 (1945)
++++|.++||+|+|+|+++. ++|+|.|++||+|.+|+.. + ++|..+ +|.+ +|++..++|+|.|++||+ |
T Consensus 41 d~d~C~~~pC~n~g~C~~~~-~~y~C~C~~G~~G~~C~~~-i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~~g 116 (134)
T 2vh0_B 41 DGDQCETSPCQNQGKCKDGL-GEYTCTCLEGFEGKNCELF-TRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNG 116 (134)
T ss_dssp ------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTS
T ss_pred CcCcCCCCCCCCcCCcccCC-CCEEeeCCCCccCCccccC-CCCccccCCCCCCC--EeECCCCCEEEECCCCcEECCCC
Confidence 68999999999999999998 8999999999999999965 6 899874 5766 999999999999999999 8
Q ss_pred CCCCC
Q psy6358 701 KNCDL 705 (1945)
Q Consensus 701 ~~C~~ 705 (1945)
+.|+.
T Consensus 117 ~~C~~ 121 (134)
T 2vh0_B 117 KACIP 121 (134)
T ss_dssp SCEEE
T ss_pred CccCc
Confidence 88875
No 161
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=98.95 E-value=8e-10 Score=131.41 Aligned_cols=81 Identities=15% Similarity=0.188 Sum_probs=70.2
Q ss_pred Cce-eeeecccCCCccccCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----------
Q psy6358 1805 SYL-CECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE----------- 1872 (1945)
Q Consensus 1805 G~t-Lhlaa~~~g~tpL~~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~----------- 1872 (1945)
|.| ||+|+.... .++.++|++||++||+||.+|..|+||||+|+..|+.++|++||++|||++.
T Consensus 169 g~t~Lh~A~~~~~----~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~ 244 (278)
T 1dcq_A 169 DETALHLAVRSVD----RTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI 244 (278)
T ss_dssp TCBHHHHHHHHCC----TTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCcchHHHHhcc----cchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHH
Confidence 444 666665421 1478999999999999999999999999999999999999999999999876
Q ss_pred ----CCHHHHHHHHHcCCCCC
Q psy6358 1873 ----GSYGACKALLDNFANRE 1889 (1945)
Q Consensus 1873 ----g~~~~v~~LL~~Gad~~ 1889 (1945)
++.++|++||++||+..
T Consensus 245 A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 245 AKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp HHHTTCHHHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHcCCCCC
Confidence 89999999999998643
No 162
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.95 E-value=2e-10 Score=120.57 Aligned_cols=75 Identities=33% Similarity=0.840 Sum_probs=30.6
Q ss_pred cCCCCCCCCCCCCCeecCCCCceeeecCCCCCCCcCccCC-CccCCCCCCCCCCCeeeccCCCeEEecCCCcc----cCC
Q psy6358 264 NIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDV-DECSIRPSVCHNGATCTNSVGGFSCICVNGWT----GPD 338 (1945)
Q Consensus 264 ~~d~C~~~~C~~~~~C~~~~~~y~C~C~~G~~G~~C~~d~-deC~~~~~~C~~~~~C~n~~g~~~C~C~~Gy~----G~~ 338 (1945)
++|+|..+||.++|+|++..++|+|.|++||+|..|+.+| |+|...+.+|.+ +|+++.|+|+|.|++||+ |..
T Consensus 41 d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~~g~~ 118 (134)
T 2vh0_B 41 DGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKA 118 (134)
T ss_dssp ----------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSC
T ss_pred CcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcEECCCCCc
Confidence 6889999999999999999999999999999999998667 899876677876 999999999999999999 777
Q ss_pred CC
Q psy6358 339 CS 340 (1945)
Q Consensus 339 C~ 340 (1945)
|+
T Consensus 119 C~ 120 (134)
T 2vh0_B 119 CI 120 (134)
T ss_dssp EE
T ss_pred cC
Confidence 85
No 163
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.90 E-value=1.1e-10 Score=144.44 Aligned_cols=93 Identities=16% Similarity=0.035 Sum_probs=76.3
Q ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCC------CCCC------------CCHHHHHHHHH
Q psy6358 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGV------NPRE------------GSYGACKALLD 1883 (1945)
Q Consensus 1822 ~~~~~v~~Ll~~gadvn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Ga------dvn~------------g~~~~v~~LL~ 1883 (1945)
+..+++++|+++|+++ +||||+||+.|+.++|++||++|+ +++. |+.++|++||+
T Consensus 77 ~~~~~~~~l~~~g~~~-------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~ 149 (376)
T 2aja_A 77 NAKQLWSDAHKKGIKS-------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCE 149 (376)
T ss_dssp TCTTHHHHHHHHTCCH-------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCc-------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 3567889999888765 499999999999999999999998 4433 99999999999
Q ss_pred cCCCC---CCcCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCc
Q psy6358 1884 NFANR---EITDHMDRLPRDVASERLHHDIVRLLDEHIPRSP 1922 (1945)
Q Consensus 1884 ~Gad~---~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 1922 (1945)
+||++ ++.+.. +||||+|+..||.+||++|+++|++..
T Consensus 150 ~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~ 190 (376)
T 2aja_A 150 LAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEA 190 (376)
T ss_dssp SCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGH
T ss_pred CCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccc
Confidence 99863 333333 999999999999999999999998743
No 164
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=98.89 E-value=4e-10 Score=114.07 Aligned_cols=69 Identities=25% Similarity=0.216 Sum_probs=58.8
Q ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Q psy6358 1837 INVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDE 1916 (1945)
Q Consensus 1837 vn~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~ 1916 (1945)
+...|.+|+||||+|+..++.++|++||++| ++++.+|..|+||||+|+..++.++|++|++
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g------------------~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~ 78 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANG------------------ADVAAKDKNGSTPLHLAARNGHLEVVKLLLE 78 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTT------------------CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcC------------------CCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4556888999999999999999999888877 6677899999999999999999999999999
Q ss_pred CCCCCcc
Q psy6358 1917 HIPRSPQ 1923 (1945)
Q Consensus 1917 ~ga~~~~ 1923 (1945)
+|++...
T Consensus 79 ~ga~~~~ 85 (110)
T 2zgd_A 79 AGADVXA 85 (110)
T ss_dssp TTCCTTC
T ss_pred cCCCccc
Confidence 9987554
No 165
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.89 E-value=4e-10 Score=113.17 Aligned_cols=77 Identities=26% Similarity=0.670 Sum_probs=30.2
Q ss_pred CCCCCCCcCccCCCccCCCCCCCCCCCeeeccCCCeEEecCCCccc---CCCCCCCCCCCC-CCCCCCCeeccCCCCeee
Q psy6358 291 LATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTG---PDCSLNIDDCAG-AACFNGATCIDRVGSFYC 366 (1945)
Q Consensus 291 ~~G~~G~~C~~d~deC~~~~~~C~~~~~C~n~~g~~~C~C~~Gy~G---~~C~~~id~C~~-~~C~~~~~C~~~~g~~~C 366 (1945)
..+|+|+.| |+|||..++..|. ++|+|+.++|+|.|++||+| ..|+ +||||.. .+|. ++|+++.++|+|
T Consensus 19 ~~~~~~~~C--d~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~-dideC~~~~~C~--~~C~n~~gsy~C 91 (107)
T 2w2n_E 19 ENLYFQGAM--GTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYKC 91 (107)
T ss_dssp -CCCCSCCB--SCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEE-C-------------------------
T ss_pred CCCcCCCCC--cCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccc-cccccCCCCCcC--CeeecCCCCEEE
Confidence 346666666 5667765545564 36777777777777777776 5565 6777763 5664 567777777777
Q ss_pred eCCCCCcc
Q psy6358 367 QCTPGKTG 374 (1945)
Q Consensus 367 ~C~~G~~G 374 (1945)
.|++||++
T Consensus 92 ~C~~Gy~~ 99 (107)
T 2w2n_E 92 QCEEGFQL 99 (107)
T ss_dssp --------
T ss_pred ECCCCceE
Confidence 77777764
No 166
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=98.88 E-value=7.2e-10 Score=112.73 Aligned_cols=67 Identities=28% Similarity=0.316 Sum_probs=60.7
Q ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCC
Q psy6358 1839 VPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHI 1918 (1945)
Q Consensus 1839 ~~d~~G~T~Lh~Aa~~g~~~iv~~LL~~Gadvn~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~g 1918 (1945)
.+|.+|+||||+|++.++.+++++||++| ++++.+|..|+||||+|+..++.++|++|+++|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g------------------~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g 65 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKG------------------ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG 65 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTT------------------CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcC------------------CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 47889999999999999999999988877 677889999999999999999999999999999
Q ss_pred CCCcc
Q psy6358 1919 PRSPQ 1923 (1945)
Q Consensus 1919 a~~~~ 1923 (1945)
++...
T Consensus 66 ~~~~~ 70 (115)
T 2l6b_A 66 ADVNA 70 (115)
T ss_dssp CCTTC
T ss_pred CCCcc
Confidence 87543
No 167
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.85 E-value=1.1e-09 Score=94.76 Aligned_cols=47 Identities=21% Similarity=0.540 Sum_probs=39.6
Q ss_pred CCCCCccCCcCCCCCCCCCcEE-----eecCCCeEEecCCCCCCCCCCCCCC
Q psy6358 860 QQQQPINIDDCAFKPCRHGGTC-----IDLVNAYKCVCQVPYTGHDCHQKLD 906 (1945)
Q Consensus 860 g~~c~~~ideC~~~pC~~~g~C-----~~~~~~y~C~C~~G~~G~~C~~~~~ 906 (1945)
|+.|+++||||+++||+|+|+| ++.+++|+|.|++||+|.+||+.+.
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~ 52 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVM 52 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECC
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCc
Confidence 4678999999999999999999 5778899999999999999997664
No 168
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.84 E-value=2.2e-09 Score=116.38 Aligned_cols=29 Identities=38% Similarity=0.886 Sum_probs=22.9
Q ss_pred CCCCCCeeecCC--CCcEE-ecCCCcccCccC
Q psy6358 1097 PCQNDGSCLDDP--GTFRC-VCMPGFTGTQCE 1125 (1945)
Q Consensus 1097 ~C~~~g~C~~~~--g~~~C-~C~~Gy~G~~C~ 1125 (1945)
||.++++|+... +.++| .|++||+|.+|+
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce 33 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE 33 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSC
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCc
Confidence 577888887765 56888 688888888886
No 169
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.82 E-value=1.2e-09 Score=109.83 Aligned_cols=78 Identities=26% Similarity=0.646 Sum_probs=38.5
Q ss_pred cCCCCccCCCCccCcccCCC-CCCCCCCeeeeCCCCeEeeCCCCccc---CCcccCCCCCCC-CCCCCCCEEecCCCCeE
Q psy6358 932 CGVGWTGRYCNEDVDECQLS-SPCRNGATCHNTNGSYLCECAKGYEG---RDCLINTDDCAS-FPCQNGGTCLDEVGDYS 1006 (1945)
Q Consensus 932 C~~G~~G~~C~~dideC~~~-~~C~~~~~C~n~~gsy~C~C~~Gy~G---~~C~~~~d~C~~-~~C~n~g~C~~~~g~y~ 1006 (1945)
...||+|..| |+|||... ..|. ++|+|+.++|+|.|++||+| ..|+ +||+|.. .+|. ++|+++.++|+
T Consensus 18 ~~~~~~~~~C--d~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~-dideC~~~~~C~--~~C~n~~gsy~ 90 (107)
T 2w2n_E 18 TENLYFQGAM--GTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYK 90 (107)
T ss_dssp --CCCCSCCB--SCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEE-C------------------------
T ss_pred cCCCcCCCCC--cCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccc-cccccCCCCCcC--CeeecCCCCEE
Confidence 3568899999 78999842 4675 59999999999999999998 7897 8999984 7896 79999999999
Q ss_pred EecCCCCCCC
Q psy6358 1007 CLCVDGFSGK 1016 (1945)
Q Consensus 1007 C~C~~Gy~G~ 1016 (1945)
|.|++||++.
T Consensus 91 C~C~~Gy~~~ 100 (107)
T 2w2n_E 91 CQCEEGFQLD 100 (107)
T ss_dssp ----------
T ss_pred EECCCCceEC
Confidence 9999999974
No 170
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.81 E-value=2.8e-09 Score=115.49 Aligned_cols=64 Identities=30% Similarity=0.712 Sum_probs=39.6
Q ss_pred CcEEe-cCCCcccCccCccccCCCCCCCCCCCEEeccCCCceeecCCCccCCCCc-cCcccCCCCCCCCCC------eec
Q psy6358 1110 TFRCV-CMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQ-INIDDCVSSPCHNGG------ICK 1181 (1945)
Q Consensus 1110 ~~~C~-C~~Gy~G~~C~~~ideC~~~pC~~~g~C~~~~gs~~C~C~~G~~G~~C~-~~~d~C~~~~C~~gg------~C~ 1181 (1945)
+.+|. |+++|+|.+|+ .|++||.|..+. ...+.|..-+|.+.+ +|.
T Consensus 74 tG~C~~C~~g~~G~~Ce--------------------------~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd 127 (162)
T 1klo_A 74 TGECLKCIYNTAGFYCD--------------------------RCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCN 127 (162)
T ss_dssp TCCBCCBCTTEETTTTC--------------------------EECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCC
T ss_pred CCcccCCCCCCcCCCcC--------------------------cCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCC
Confidence 44674 77888777775 366677776665 233445555565543 564
Q ss_pred cCCCCceeeCCCCCCcCCCc
Q psy6358 1182 DSIAGYTCECLAGFTGMSCE 1201 (1945)
Q Consensus 1182 ~~~~~~~C~C~~G~~G~~C~ 1201 (1945)
.. ..+|.|++||+|..|+
T Consensus 128 ~~--tG~C~C~~g~~G~~Cd 145 (162)
T 1klo_A 128 PV--TGQCQCLPHVSGRDCG 145 (162)
T ss_dssp TT--TCCCCBCTTEESTTCC
T ss_pred CC--CCEeECCCCCcCCCCC
Confidence 33 2467888888887775
No 171
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.80 E-value=3.3e-09 Score=142.72 Aligned_cols=205 Identities=23% Similarity=0.629 Sum_probs=81.7
Q ss_pred CCCCCCCeeecCCCCCceecCCCC----CCCcccccCccccCCCCCCCCeeecCCCCceeee----cCCCCCCCCCCCCC
Q psy6358 154 SPCEHDGTCVNTPGSFACNCTQGF----TGPRCETNVNECESHPCQNDGSCLDDPGTFRCVC----MCEPGYTGQNCESK 225 (1945)
Q Consensus 154 ~~C~~~~~C~n~~g~~~C~C~~G~----~G~~C~~~i~eC~~~~C~~~g~C~~~~gs~~C~C----~C~~G~~G~~C~~~ 225 (1945)
..|.....|.+...-+.+.|..++ .+..|......|.+ +.|+.. +++ | .|..|.....|..
T Consensus 162 ~~Cdg~~dC~dgsDE~~~~C~~~~~~~~~~~~C~~~~f~C~~------g~Ci~~--~~~--CDg~~dC~dgsDE~~C~~- 230 (791)
T 3m0c_C 162 WACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLS------GECIHS--SWR--CDGGPDCKDKSDEENCAV- 230 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCCCcCCCCCCcccccCCCccccCCCCCCCCCCcccccC------Cceecc--ccc--cCCCCCCCCCCCCCCccc-
Confidence 356666667665555556676554 34456554444543 334322 221 2 3344444444432
Q ss_pred CcCCCC--CCCCCCCeeccCCCCcccc----ccCCCcCCCCccccCCCCC---CCCCCCCCeecCCCC--ceeeecCCCC
Q psy6358 226 YVPCDP--SPCQNGGVCRELDNLNYEC----ECQSGYRGKNCEENIDDCP---GNLCQNGATCMDGIN--KYSCLCLATY 294 (1945)
Q Consensus 226 ~~~C~~--~~C~n~g~C~~~~~~~~~C----~C~~G~~G~~C~~~~d~C~---~~~C~~~~~C~~~~~--~y~C~C~~G~ 294 (1945)
..|.+ ..|.+ +.|+. .++.| .|..|+.+..|. .+.+|. ..+|.+ +.|++... .+.+.|+.|+
T Consensus 231 -~~C~~~~f~C~~-g~Ci~---~~~~Cdg~~dC~dgsDE~~C~-~~~~C~~~~~~~C~~-G~Ci~~~~~Cd~~~dC~dgs 303 (791)
T 3m0c_C 231 -ATCRPDEFQCSD-GNCIH---GSRQCDREYDCKDMSDEVGCV-NVTLCEGPNKFKCHS-GECITLDKVCNMARDCRDWS 303 (791)
T ss_dssp ------------------------------------------------CCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSC
T ss_pred -cccCCCcceecC-CceEe---cceecCChhccccccccCccc-ccccccCCCccccCC-CcccccccccCCcccccccc
Confidence 12322 34544 36663 24556 689999888887 356674 347877 68886532 4567899998
Q ss_pred CCCcCccCCCccCCCCCCCCCCCeeeccCCCeEEecCCCcc---cCCCCCCCCCCCC-CCCCCCCeeccCCCCeeeeCCC
Q psy6358 295 TGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWT---GPDCSLNIDDCAG-AACFNGATCIDRVGSFYCQCTP 370 (1945)
Q Consensus 295 ~G~~C~~d~deC~~~~~~C~~~~~C~n~~g~~~C~C~~Gy~---G~~C~~~id~C~~-~~C~~~~~C~~~~g~~~C~C~~ 370 (1945)
.+...+-+++||..+...|. .+|+|+.++|+|.|++||+ |..|+ +||||.. .+| .++|+|+.|+|+|.|++
T Consensus 304 De~~~~C~~~~C~~~~~~C~--~~C~~~~~~y~C~C~~Gy~l~~g~~C~-dideC~~~~~C--~~~C~n~~gsy~C~C~~ 378 (791)
T 3m0c_C 304 DEPIKECGTNECLDNNGGCS--HVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTC--SQLCVNLEGGYKCQCEE 378 (791)
T ss_dssp SCCCTTBSCCSTTTGGGGCS--SEEEECSBSEEEECCTTCEEETTTEEE-CCCCCSSSSSC--TTTCCBCSSCBCCCCCS
T ss_pred CccccccccccccccccCcc--ccccCCCCCcccCCCCCCccCCCCccc-cCcccCCCCCC--CCeeecCCCCceeecCC
Confidence 77543225788876666675 3899999999999999996 77885 8999973 355 45899999999999999
Q ss_pred CCcc----CccCCCC
Q psy6358 371 GKTG----LLCHLED 381 (1945)
Q Consensus 371 G~~G----~~C~~~d 381 (1945)
||++ ..|..++
T Consensus 379 Gy~l~~~~~~C~~~~ 393 (791)
T 3m0c_C 379 GFQLDPHTKACKAVG 393 (791)
T ss_dssp SEECCSSCCCCEETT
T ss_pred CCEeCCCCceeeecc
Confidence 9973 4555443
No 172
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.80 E-value=3.3e-08 Score=132.47 Aligned_cols=165 Identities=25% Similarity=0.691 Sum_probs=115.6
Q ss_pred CCCCCCccccCCCCcee----ecCCCCCCCCccccCccccCC--CCCCCCeeecCCCCeeec----CCCCccCCccccCC
Q psy6358 1248 PCQFGGQCEDLINGYQC----RCKPGTSGTNCEININECYSN--PCRNGAKCVDGINRYSCE----CLPGYTGLHCETNI 1317 (1945)
Q Consensus 1248 pC~~~g~C~~~~g~y~C----~C~~G~~G~~C~~~i~~C~~~--~C~~~~~C~~~~~~~~C~----C~~G~~G~~C~~~i 1317 (1945)
.|.++ .|+.. +++| .|..|.-..+|.. .+|... +|.+ +.|++ .++.|. |+.|..+..|.. +
T Consensus 182 ~C~~g-~Ci~~--~~~CDg~~dC~dgsDE~~C~~--~~C~~~~f~C~~-g~Ci~--~~~~Cdg~~dC~dgsde~~C~~-~ 252 (699)
T 1n7d_A 182 HCLSG-ECIHS--SWRCDGGPDCKDKSDEENCAV--ATCRPDEFQCSD-GNCIH--GSRQCDREYDCKDMSDEVGCVN-V 252 (699)
T ss_dssp CCSSS-CCCST--TCTTSSSCCSTTSCSSCSCCC--CCCCSSEEESSS-SCEEE--TTCCSSSCCCSSSSCSSSSTTC-C
T ss_pred ecCCC-ceEec--hhccCCCCCCCCCcccccCCC--cccCCCcEecCC-Cceee--eecccCCCCCCCCCCccCCCCC-C
Confidence 45543 67653 5677 6888887777752 455433 5774 57887 467786 888888888853 5
Q ss_pred CCCC---CCCCCCCCeeeeCCC--CceeeCCCCccCCCCcccCCCCCCCCCCCCCEeecCCCCceeeCCCCCC---CCCC
Q psy6358 1318 NECA---SNPCANGGVCVDLID--GFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYG---GKRC 1389 (1945)
Q Consensus 1318 ~~C~---~~~C~~~g~C~~~~~--~~~C~C~~Gy~G~~C~~~~deC~~~~C~~~g~C~~~~g~~~C~C~~Gy~---G~~C 1389 (1945)
.+|. ..+|.+ |+|++... .+.+.|+.|+.+...+-+++||...+....++|+++.++|+|.|++||+ |..|
T Consensus 253 ~~C~~~~~~~C~~-g~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~~~~~~C 331 (699)
T 1n7d_A 253 TLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRC 331 (699)
T ss_dssp CCCCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCCSSCCCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCCCSSSCC
T ss_pred CcccCCCceecCC-CcEeCCcccccccceecCcccccccccccccccccccCcCCCcccCCCCcEEeCCCCeEcCCCCcc
Confidence 5673 246766 67876432 3567788887655333356777654322236889999999999999998 7889
Q ss_pred ccCCCCCC-CCCCCCCCeEeeCCCCceeecCCCCcCC
Q psy6358 1390 EFDIDECG-SNPCQHGGICTDHLNGYTCECQIGYTGI 1425 (1945)
Q Consensus 1390 ~~~id~C~-~~pC~n~g~C~~~~~~~~C~C~~G~~G~ 1425 (1945)
+ +|+||. ..+|. ++|+++.++|+|.|++||++.
T Consensus 332 ~-dideC~~~~~C~--~~C~n~~g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 332 E-DIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 365 (699)
T ss_dssp C-CCCCCSSSSSCT--TTCCBCSSCBCCCCCSSCBCC
T ss_pred c-CccccCCCCccc--cccccCCCCeeeeeecccccC
Confidence 7 889997 56786 489999999999999999763
No 173
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.75 E-value=4.3e-09 Score=91.13 Aligned_cols=47 Identities=21% Similarity=0.529 Sum_probs=39.4
Q ss_pred ccccccCCCCCCCCCCCCCee-----eecCCceEEeeCCCccCCCcccCCCC
Q psy6358 428 INCEINIDDCAFKPCRHGGTC-----IDLVNAYKCVCQVPYTGHDCHQKLDP 474 (1945)
Q Consensus 428 ~~C~~~~~~C~~~~C~~~g~C-----~~~~g~y~C~C~~G~~G~~C~~~~d~ 474 (1945)
..|+++||||.++||+|+|+| ++..++|+|.|++||+|.+||..|..
T Consensus 2 ~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~~ 53 (55)
T 3u7u_G 2 TSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVMA 53 (55)
T ss_dssp -CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECCC
T ss_pred CCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCcc
Confidence 357788899999999999999 57788999999999999999987653
No 174
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.74 E-value=6.4e-09 Score=139.95 Aligned_cols=120 Identities=28% Similarity=0.612 Sum_probs=77.6
Q ss_pred cCCCCCCCCCCCCCCcCCC---CCCCCCCCeeccCCC-CccccccCCCcCCCCccccCCCCCCCCCCCCCeecCCCCcee
Q psy6358 212 MCEPGYTGQNCESKYVPCD---PSPCQNGGVCRELDN-LNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYS 287 (1945)
Q Consensus 212 ~C~~G~~G~~C~~~~~~C~---~~~C~n~g~C~~~~~-~~~~C~C~~G~~G~~C~~~~d~C~~~~C~~~~~C~~~~~~y~ 287 (1945)
.|..|+.+..|... ..|. ..+|.+ |.|+.... -.+.+.|+.|+.+...+-++++|..++..-..+|+++.++|+
T Consensus 257 dC~dgsDE~~C~~~-~~C~~~~~~~C~~-G~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~~C~~~~~~C~~~C~~~~~~y~ 334 (791)
T 3m0c_C 257 DCKDMSDEVGCVNV-TLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYE 334 (791)
T ss_dssp -----------------CCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCCTTBSCCSTTTGGGGCSSEEEECSBSEE
T ss_pred ccccccccCccccc-ccccCCCccccCC-CcccccccccCCccccccccCccccccccccccccccCccccccCCCCCcc
Confidence 46677777777643 3453 357876 68875432 245778999987754333456665433222348999999999
Q ss_pred eecCCCCC---CCcCccCCCccCCCCCCCCCCCeeeccCCCeEEecCCCcccC
Q psy6358 288 CLCLATYT---GDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGP 337 (1945)
Q Consensus 288 C~C~~G~~---G~~C~~d~deC~~~~~~C~~~~~C~n~~g~~~C~C~~Gy~G~ 337 (1945)
|.|++||+ |..|+ |||||. .+..|. ++|+|+.|+|+|.|++||++.
T Consensus 335 C~C~~Gy~l~~g~~C~-dideC~-~~~~C~--~~C~n~~gsy~C~C~~Gy~l~ 383 (791)
T 3m0c_C 335 CLCPDGFQLVAQRRCE-DIDECQ-DPDTCS--QLCVNLEGGYKCQCEEGFQLD 383 (791)
T ss_dssp EECCTTCEEETTTEEE-CCCCCS-SSSSCT--TTCCBCSSCBCCCCCSSEECC
T ss_pred cCCCCCCccCCCCccc-cCcccC-CCCCCC--CeeecCCCCceeecCCCCEeC
Confidence 99999995 78895 999998 466786 489999999999999999863
No 175
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.74 E-value=4.9e-09 Score=127.08 Aligned_cols=71 Identities=38% Similarity=0.855 Sum_probs=64.5
Q ss_pred cCCCCcCCCCCCCCCEeeecCCCceEEeCCCCccCCCcccCCCCcccC---CCCCCCCeeeeCCCCeeeeccCCcCCC
Q psy6358 627 YFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYS---NPCQHAGTCEDRIADYACYCLPMWNGK 701 (1945)
Q Consensus 627 ~~~~eC~~~pC~n~g~C~~~~~~~y~C~C~~G~~G~~Ce~~~~~~C~~---~pC~~~~~C~~~~~~y~C~C~~G~~G~ 701 (1945)
+++++|.++||+|+|+|.+.. ++|+|.|++||+|.+|+.+ ++||.. +||.+ +|++..++|+|.|++||+|.
T Consensus 3 ~d~~~C~~~pC~~~g~C~~~~-~~~~C~C~~g~~g~~C~~~-~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 3 KGGSPCISQPCLHNGSCQDSI-WGYTCTCSPGYEGSNCELA-KNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG 76 (317)
T ss_dssp ---CCTTSCCCTTTCCCCCCS-SSCCCCCSSSCCSSSSCCC-SSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred ccCCcCCCCCCCCCCEeECCC-CCeEEECCCCCcCCccccC-cccCCCCCCCCCcC--ccccCCCeeEEecccccccc
Confidence 368999999999999999998 8999999999999999977 999997 79998 99999999999999999984
No 176
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.73 E-value=3.9e-08 Score=131.66 Aligned_cols=165 Identities=22% Similarity=0.592 Sum_probs=126.3
Q ss_pred CCCCCCeeccCCCCcccc----ccCCCcCCCCccccCCCCCCC--CCCCCCeecCCCCceeee----cCCCCCCCcCccC
Q psy6358 233 PCQNGGVCRELDNLNYEC----ECQSGYRGKNCEENIDDCPGN--LCQNGATCMDGINKYSCL----CLATYTGDLCEQD 302 (1945)
Q Consensus 233 ~C~n~g~C~~~~~~~~~C----~C~~G~~G~~C~~~~d~C~~~--~C~~~~~C~~~~~~y~C~----C~~G~~G~~C~~d 302 (1945)
.|.++ .|+.. +++| .|..|+...+|. ..+|... +|.+ +.|++ .+++|. |..|..+..|. .
T Consensus 182 ~C~~g-~Ci~~---~~~CDg~~dC~dgsDE~~C~--~~~C~~~~f~C~~-g~Ci~--~~~~Cdg~~dC~dgsde~~C~-~ 251 (699)
T 1n7d_A 182 HCLSG-ECIHS---SWRCDGGPDCKDKSDEENCA--VATCRPDEFQCSD-GNCIH--GSRQCDREYDCKDMSDEVGCV-N 251 (699)
T ss_dssp CCSSS-CCCST---TCTTSSSCCSTTSCSSCSCC--CCCCCSSEEESSS-SCEEE--TTCCSSSCCCSSSSCSSSSTT-C
T ss_pred ecCCC-ceEec---hhccCCCCCCCCCcccccCC--CcccCCCcEecCC-Cceee--eecccCCCCCCCCCCccCCCC-C
Confidence 56654 78743 5788 799999888886 3466543 5774 57887 467886 99999888885 4
Q ss_pred CCccC-CCCCCCCCCCeeeccCC--CeEEecCCCcccCCCCCCCCCCCCC--CCCCCCeeccCCCCeeeeCCCCCc---c
Q psy6358 303 VDECS-IRPSVCHNGATCTNSVG--GFSCICVNGWTGPDCSLNIDDCAGA--ACFNGATCIDRVGSFYCQCTPGKT---G 374 (1945)
Q Consensus 303 ~deC~-~~~~~C~~~~~C~n~~g--~~~C~C~~Gy~G~~C~~~id~C~~~--~C~~~~~C~~~~g~~~C~C~~G~~---G 374 (1945)
+++|. .....|.+ ++|++... .+.+.|++|+.+...+-+++||... +|. ++|+++.++|+|.|++||+ |
T Consensus 252 ~~~C~~~~~~~C~~-g~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~eC~~~~~~C~--~~C~~~~~~~~C~C~~G~~~~~~ 328 (699)
T 1n7d_A 252 VTLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCS--HVCNDLKIGYECLCPDGFQLVAQ 328 (699)
T ss_dssp CCCCCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCCSSCCCCCTTSSTTTSC--TTCCCCTTCCCCCCCSSSCCCSS
T ss_pred CCcccCCCceecCC-CcEeCCcccccccceecCcccccccccccccccccccCcC--CCcccCCCCcEEeCCCCeEcCCC
Confidence 66783 34467877 58876533 3567899998876554577888764 353 5899999999999999998 8
Q ss_pred CccCCCCccc-CCCCCCCCcccCCCCcCCceeeecCCCCCCC
Q psy6358 375 LLCHLEDACT-SNPCHADAICDTNPIINGSYTCSCASGYKGV 415 (1945)
Q Consensus 375 ~~C~~~d~C~-~~~C~~~~~C~~~~~~~g~~~C~C~~Gy~G~ 415 (1945)
..|+++|||. ..+|. ++|.+.+ |+|+|.|++||++.
T Consensus 329 ~~C~dideC~~~~~C~--~~C~n~~---g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 329 RRCEDIDECQDPDTCS--QLCVNLE---GGYKCQCEEGFQLD 365 (699)
T ss_dssp SCCCCCCCCSSSSSCT--TTCCBCS---SCBCCCCCSSCBCC
T ss_pred CcccCccccCCCCccc--cccccCC---CCeeeeeecccccC
Confidence 8999999998 56885 5899865 99999999999974
No 177
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.65 E-value=1.6e-08 Score=122.48 Aligned_cols=71 Identities=39% Similarity=0.998 Sum_probs=62.4
Q ss_pred ccCCCCCCCCCCCCCEeecCCCCceeeCCCCCCCCCCccCCCCCCC---CCCCCCCeEeeCCCCceeecCCCCcCC
Q psy6358 1353 SDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGS---NPCQHGGICTDHLNGYTCECQIGYTGI 1425 (1945)
Q Consensus 1353 ~~~deC~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~id~C~~---~pC~n~g~C~~~~~~~~C~C~~G~~G~ 1425 (1945)
.|+|+|.++||.++++|++..++|+|.|++||+|+.|+.++++|.. +||.+ .|++..++|+|.|++||+|.
T Consensus 3 ~d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG 76 (317)
T ss_dssp ---CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred ccCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEEecccccccc
Confidence 3678999999999999999999999999999999999989999986 78987 89999999999999999874
No 178
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.63 E-value=1.2e-08 Score=115.08 Aligned_cols=62 Identities=31% Similarity=0.656 Sum_probs=53.0
Q ss_pred CCCCCCCCEeecCCCCceeeCCCC------CCCCCCccCCCCCCCC---CCCCC--CeEeeCCCCceeecCCCCcCCCCc
Q psy6358 1360 SDPCLNGGTCEDGLNQFICHCKPG------YGGKRCEFDIDECGSN---PCQHG--GICTDHLNGYTCECQIGYTGINCE 1428 (1945)
Q Consensus 1360 ~~~C~~~g~C~~~~g~~~C~C~~G------y~G~~C~~~id~C~~~---pC~n~--g~C~~~~~~~~C~C~~G~~G~~C~ 1428 (1945)
..+|.++|+|+. .+|.|++| |+|..|+.+++.|... +|.++ |+|.. .+|.|.+||+|..|+
T Consensus 142 ~~~Csg~G~C~~----g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~~G~~C~ 213 (217)
T 2p28_B 142 SIICSGLGDCVC----GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGSACQ 213 (217)
T ss_dssp SCBGGGTEEEET----TEEEECCCCSTTCCEESTTSCEESSCSCEETTEETTCTTTEEEET----TEEEECTTEESTTSC
T ss_pred CCCCCCCCEEeC----CceECCCCCCCcccEECCCcccCCccCCCCCCCCCCCCCCcEEeC----CeeECCCCCccCCcC
Confidence 467888999985 37999999 6999999878889765 79988 99984 389999999999998
Q ss_pred c
Q psy6358 1429 I 1429 (1945)
Q Consensus 1429 ~ 1429 (1945)
.
T Consensus 214 ~ 214 (217)
T 2p28_B 214 H 214 (217)
T ss_dssp E
T ss_pred C
Confidence 5
No 179
>3i08_A Neurogenic locus notch homolog protein 1; SEA domain, LIN-12 notch repeat, LNR, heterodimerization domain, HD, activator, ANK repeat, calcium; 3.20A {Homo sapiens}
Probab=98.61 E-value=9.1e-09 Score=112.21 Aligned_cols=72 Identities=42% Similarity=0.917 Sum_probs=63.4
Q ss_pred CCCCcccccccCCCcccCCCCCccccccccccccc----ccccCcccccccccCCCCCcCCCCCCCCCCCcCCCCCCCC
Q psy6358 1490 CTANINCWEVFMNGRCDEVCNNPQCLFDGRDCEKN----LQPCNPIYDAYCQKHYANGHCDYSCNNAECNWDGLDCERE 1564 (1945)
Q Consensus 1490 C~~~~~C~~~~~~~~C~~~c~~~~C~~dg~~c~~~----~~~c~~~~~~~C~~~~~~~~c~~~C~~~~c~~~G~~C~~~ 1564 (1945)
|... .||..+++++||.+||+++|.|||+||+.. +..|. +..+|+..+++++||.+||+++|+|||+||...
T Consensus 5 C~~~-~C~~~~gdg~CD~eCN~~~C~~DGgDCs~~~~~Pw~~C~--~~~~C~~~~~dg~CD~~CN~~~C~~DGgDC~~~ 80 (220)
T 3i08_A 5 CELP-ECQEDAGNKVCSLQCNNHACGWDGGDCSLNFNDPWKNCT--QSLQCWKYFSDGHCDSQCNSAGCLFDGFDCQRA 80 (220)
T ss_dssp CCCT-THHHHTTSSSCCGGGCSGGGHHHHTTTTTTCCCTTTTSC--GGGCGGGTTTSSSCCGGGCSGGGGGGGGTTCTT
T ss_pred CCcc-ccccccCCCccCcccCCccccCCCCcccccCCCCccCCC--chhHHHHHcCCCcCCcccCccccCccCCCcCCC
Confidence 5544 799999999999999999999999999854 35686 447899999999999999999999999999863
No 180
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.61 E-value=2e-08 Score=113.35 Aligned_cols=94 Identities=35% Similarity=0.765 Sum_probs=51.5
Q ss_pred CCCCCCCeeecCCCCceEecCCCCCCCCCCCCCCC---------CC----CCCCCCCCeeecCCCCcEEecCCC------
Q psy6358 1058 SPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNE---------CE----SHPCQNDGSCLDDPGTFRCVCMPG------ 1118 (1945)
Q Consensus 1058 ~~C~~~g~C~n~~gs~~C~C~~Gf~G~~C~~~i~~---------C~----~~~C~~~g~C~~~~g~~~C~C~~G------ 1118 (1945)
..|..+|+|+. ..|.|++||+|..|+.+++. |. ..+|.++|+|++ .+|.|++|
T Consensus 96 ~~Csg~G~C~~----g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw~~~~~ 167 (217)
T 2p28_B 96 SLCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGKL 167 (217)
T ss_dssp CTTTTSEEEET----TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCCSTTCC
T ss_pred CccCCCceEEC----CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCCCCccc
Confidence 35667778874 48999999999998754332 32 234555555543 24555555
Q ss_pred cccCccCccccCCCCC---CCCCC--CEEeccCCCceeecCCCccCCCCc
Q psy6358 1119 FTGTQCETDIDECASN---PCLNG--GICNDLINTFKCACPIGFTGSHCQ 1163 (1945)
Q Consensus 1119 y~G~~C~~~ideC~~~---pC~~~--g~C~~~~gs~~C~C~~G~~G~~C~ 1163 (1945)
|+|..|+.++++|... +|.++ |+|.+ .+|.|.+||+|..|+
T Consensus 168 ~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~~G~~C~ 213 (217)
T 2p28_B 168 IYGQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGSACQ 213 (217)
T ss_dssp EESTTSCEESSCSCEETTEETTCTTTEEEET----TEEEECTTEESTTSC
T ss_pred EECCCcccCCccCCCCCCCCCCCCCCcEEeC----CeeECCCCCccCCcC
Confidence 3555555444445433 44444 45542 245555555554443
No 181
>2oo4_A Notch 2, neurogenic locus notch homolog protein 2, HN2, notch2, NOTC2; alpha-beta-sandwich, SEA domain, LNR, LIN12 notch repeat, CY rich, HD domain; 2.00A {Homo sapiens}
Probab=98.52 E-value=8e-09 Score=116.17 Aligned_cols=60 Identities=33% Similarity=0.847 Sum_probs=55.8
Q ss_pred ccCcccCCccCccCCCCCCCCCCCCccCCCCcccccccCCCcccCCCCCcccccccccccccc
Q psy6358 1463 RCDDECNTIACHFDGNDCSLGINPWINCTANINCWEVFMNGRCDEVCNNPQCLFDGRDCEKNL 1525 (1945)
Q Consensus 1463 ~c~~~C~~~~c~~~g~~C~~~~~~~~~C~~~~~C~~~~~~~~C~~~c~~~~C~~dg~~c~~~~ 1525 (1945)
+|+.+||+.+|.|||+||+. ||.+|....+|++.|+||+||+.||+++|+|||+||....
T Consensus 58 ~Cd~~Cn~~~C~~DG~DC~~---~~~~C~~~~~C~~~~~dG~CD~~CNn~eCg~DGgDC~~~~ 117 (234)
T 2oo4_A 58 QCDELCNTVECLFDNFECQG---NSKTCKYDKYCADHFKDNHCNQGCNSEECGWDGLDCAADQ 117 (234)
T ss_dssp SCCGGGCSTTTTHHHHTSCS---SCCCCTTHHHHHHHTTSSSCCGGGCSGGGGGGGGTTCTTS
T ss_pred cCCcccCchhhccCCccccc---ccccCCCCcchhhhcCCCCcCcccCccccCCcCCcccCCc
Confidence 89999999999999999993 7888988789999999999999999999999999998653
No 182
>3eto_A Neurogenic locus notch homolog protein 1; alpha-beta sandwich, HD domain, LNR repeat, calcium-binding, domain, autoinhibition, activator, T-all; 2.00A {Homo sapiens} PDB: 3l95_X* 3i08_B 1pb5_A
Probab=98.48 E-value=2.8e-08 Score=111.05 Aligned_cols=71 Identities=42% Similarity=0.929 Sum_probs=62.9
Q ss_pred CCCCcccccccCCCcccCCCCCccccccccccccc----ccccCcccccccccCCCCCcCCCCCCCCCCCcCCCCCCC
Q psy6358 1490 CTANINCWEVFMNGRCDEVCNNPQCLFDGRDCEKN----LQPCNPIYDAYCQKHYANGHCDYSCNNAECNWDGLDCER 1563 (1945)
Q Consensus 1490 C~~~~~C~~~~~~~~C~~~c~~~~C~~dg~~c~~~----~~~c~~~~~~~C~~~~~~~~c~~~C~~~~c~~~G~~C~~ 1563 (1945)
|... .||..++|++||.+||+++|.|||+||+.. +..|. +..+|++.+++++||.+||+++|+|||+||..
T Consensus 5 C~~~-~C~~~~gdg~CD~eCN~~~C~~DGgDC~~~~~~pw~~C~--~~~~C~~~~~dg~CD~eCN~~~C~~DGgDC~~ 79 (242)
T 3eto_A 5 CELP-ECQEDAGNKVCSLQCNNHACGWDGGDCSLNFNDPWKNCT--QSLQCWKYFSDGHCDSQCNSAGCLFDGFDCQR 79 (242)
T ss_dssp CCCH-HHHHHTTSSSCCGGGCSGGGHHHHTTTTTTCSCTTTTSC--GGGCGGGTTTSSSCCGGGCSGGGGGGGGTTSC
T ss_pred CCcc-ccccccCCCccCCccCcccccCCCCccccccCCCCCCCC--CccchHHHhCCCccCcccCccccCccCCcccC
Confidence 4433 799999999999999999999999999854 35686 45789999999999999999999999999986
No 183
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.47 E-value=1.1e-07 Score=77.02 Aligned_cols=38 Identities=37% Similarity=1.059 Sum_probs=35.8
Q ss_pred ccCCcCCCCCCCCCcEEeecCCCeEEecCCCCCCCCCC
Q psy6358 865 INIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCH 902 (1945)
Q Consensus 865 ~~ideC~~~pC~~~g~C~~~~~~y~C~C~~G~~G~~C~ 902 (1945)
+|||+|.++||+|+|+|++..++|+|.|++||+|..|+
T Consensus 1 ~d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred CccccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 37899999999999999999999999999999999986
No 184
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.43 E-value=1.5e-07 Score=76.04 Aligned_cols=37 Identities=38% Similarity=1.059 Sum_probs=34.7
Q ss_pred cCCCCCCCCCCCCCeeeecCCceEEeeCCCccCCCcc
Q psy6358 433 NIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCH 469 (1945)
Q Consensus 433 ~~~~C~~~~C~~~g~C~~~~g~y~C~C~~G~~G~~C~ 469 (1945)
++++|.++||+|+|+|+++.++|+|.|++||+|..|+
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 5788888999999999999999999999999999886
No 185
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.20 E-value=1e-06 Score=76.30 Aligned_cols=43 Identities=26% Similarity=0.769 Sum_probs=37.4
Q ss_pred cCCCCCCC---CCCCCCeee--ecCCceEEeeCCCccCCCcccCCCCC
Q psy6358 433 NIDDCAFK---PCRHGGTCI--DLVNAYKCVCQVPYTGHDCHQKLDPC 475 (1945)
Q Consensus 433 ~~~~C~~~---~C~~~g~C~--~~~g~y~C~C~~G~~G~~C~~~~d~C 475 (1945)
+|++|.++ ||+|+|+|+ +..++|+|.|++||+|..|+.++.++
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~~~~ 49 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRDLRW 49 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCSCCC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccCccc
Confidence 46677766 999999999 88999999999999999999876654
No 186
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.19 E-value=1.2e-06 Score=75.88 Aligned_cols=41 Identities=27% Similarity=0.822 Sum_probs=36.6
Q ss_pred cCCcCCCC---CCCCCcEEe--ecCCCeEEecCCCCCCCCCCCCCC
Q psy6358 866 NIDDCAFK---PCRHGGTCI--DLVNAYKCVCQVPYTGHDCHQKLD 906 (1945)
Q Consensus 866 ~ideC~~~---pC~~~g~C~--~~~~~y~C~C~~G~~G~~C~~~~~ 906 (1945)
+||+|.++ ||+|+|+|+ +..++|+|.|++||+|..|+..+.
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~~ 47 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRDL 47 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCSC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccCc
Confidence 68999987 999999999 788999999999999999986543
No 187
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.18 E-value=9.2e-07 Score=73.82 Aligned_cols=39 Identities=23% Similarity=0.661 Sum_probs=34.4
Q ss_pred CCCCC---CCCCCCeee--ecCCceEEeeCCCccCCCcccCCCC
Q psy6358 436 DCAFK---PCRHGGTCI--DLVNAYKCVCQVPYTGHDCHQKLDP 474 (1945)
Q Consensus 436 ~C~~~---~C~~~g~C~--~~~g~y~C~C~~G~~G~~C~~~~d~ 474 (1945)
+|.++ ||+|+|+|+ +..++|+|.|++||+|..|+.+++|
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~~e 45 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRDLR 45 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTCEECCC
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCCcccCC
Confidence 46566 999999998 7889999999999999999988764
No 188
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.16 E-value=2.3e-07 Score=117.53 Aligned_cols=79 Identities=27% Similarity=0.741 Sum_probs=41.9
Q ss_pred ceeeCCCCCcccccccCCCCcCCCCCCCCCEeeecCCCceEEeCCCCccCCCcccCCCCcccCCCCCCCCeeeeCCCCee
Q psy6358 612 HTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADYA 691 (1945)
Q Consensus 612 ~~C~C~~Gy~G~~C~~~~~eC~~~pC~n~g~C~~~~~~~y~C~C~~G~~G~~Ce~~~~~~C~~~pC~~~~~C~~~~~~y~ 691 (1945)
....|..||+|..|+ +++|.. +|+| |+|++. ++|.|++||+|.+|+ +++|.+ ||+|+++|++. |+
T Consensus 377 ~p~~C~~~~~g~~c~--~~~C~~-~C~n-G~C~~~----~~C~C~~G~~G~~C~---~~~C~~-~C~~~g~C~~~---~~ 441 (463)
T 2wg3_C 377 MPEECRATVQPAQTL--TSECSR-LCRN-GYCTPT----GKCCCSPGWEGDFCR---TAKCEP-ACRHGGVCVRP---NK 441 (463)
T ss_dssp SCGGGCCCCCCCCCC--CCHHHH-HCCS-EEECTT----SCEEECTTEESTTSC---EECC-------------------
T ss_pred ccccCCCCCcCCCCc--cccccC-CCCC-CccCCC----CeECCCCCcCCCcCC---cCcCCC-CCCCCCEECCC---CE
Confidence 457899999999997 567876 7998 799753 489999999999997 568987 99999999975 79
Q ss_pred eeccCCcCCCCCCC
Q psy6358 692 CYCLPMWNGKNCDL 705 (1945)
Q Consensus 692 C~C~~G~~G~~C~~ 705 (1945)
|.|++||+|..|+.
T Consensus 442 C~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 442 CLCKKGYLGPQCEQ 455 (463)
T ss_dssp --------------
T ss_pred EECCCCcccCCCCC
Confidence 99999999999986
No 189
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=98.11 E-value=8.8e-07 Score=79.77 Aligned_cols=45 Identities=29% Similarity=0.575 Sum_probs=39.8
Q ss_pred CCCCCCCCCCCCeeee-----cCCceEEeeCCCccCCCcccCCCCCcCCC
Q psy6358 435 DDCAFKPCRHGGTCID-----LVNAYKCVCQVPYTGHDCHQKLDPCVPNS 479 (1945)
Q Consensus 435 ~~C~~~~C~~~g~C~~-----~~g~y~C~C~~G~~G~~C~~~~d~C~~~~ 479 (1945)
++|.++||+|+|+|++ ..++|+|.|++||+|..|+.+++++....
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~~~~~ 56 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQ 56 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSCTTC
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCcccccc
Confidence 5677899999999997 67899999999999999999999987543
No 190
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=98.10 E-value=4.2e-07 Score=78.39 Aligned_cols=44 Identities=30% Similarity=0.711 Sum_probs=36.3
Q ss_pred ceeeCCCCCcccccccCCCCcCCCCCCCCCEeeec---CCCceEEeCCCCccCCCcccC
Q psy6358 612 HTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSK---EGGGYRCDCPPGATGTHCELD 667 (1945)
Q Consensus 612 ~~C~C~~Gy~G~~C~~~~~eC~~~pC~n~g~C~~~---~~~~y~C~C~~G~~G~~Ce~~ 667 (1945)
++|.|++||+ ++||+|||+|++. ..++|+|.|++||+|.+||..
T Consensus 3 ~~C~C~~g~~------------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 3 PTYKCPETFD------------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (52)
T ss_dssp CCBCCCHHHH------------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCEE
T ss_pred eeeECCCCCc------------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCccc
Confidence 4689999997 4699999999973 126899999999999999854
No 191
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.10 E-value=5.2e-07 Score=112.38 Aligned_cols=73 Identities=27% Similarity=0.809 Sum_probs=17.1
Q ss_pred CCCccCCCCCCCCCCCeeeccCCCeEEecCCCcc----cCCCCCCCCCCC-CCCCCCCCeeccCCCCeeeeCCCCCc---
Q psy6358 302 DVDECSIRPSVCHNGATCTNSVGGFSCICVNGWT----GPDCSLNIDDCA-GAACFNGATCIDRVGSFYCQCTPGKT--- 373 (1945)
Q Consensus 302 d~deC~~~~~~C~~~~~C~n~~g~~~C~C~~Gy~----G~~C~~~id~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~--- 373 (1945)
|+|||..++..|.+ +|.+..|+|+|.|++||+ |..| .+||||. ..+|.+. |+++.|+|+|.|++||+
T Consensus 2 ~~~~C~~~~~~c~~--~C~~~~g~~~C~C~~G~~l~~~~~~C-~d~~eC~~~~~C~~~--C~~~~g~~~C~C~~g~~l~~ 76 (386)
T 3v65_B 2 GEENCNVNNGGCAQ--KCQMIRGAVQCTCHTGYRLTEDGRTC-QDVNECAEEGYCSQG--CTNSEGAFQCWCEAGYELRP 76 (386)
T ss_dssp -----------------------------------------------------CCTTE--EC-----CCEECCTTEEECT
T ss_pred CcCcccCCCCCCCC--CCcCCCCCcEeECCCCceECCCCCcc-CccceeCCcCcccCc--CCCCCCCCeEEECCCceEcC
Confidence 67888776666764 788888888888888887 7788 6888886 4578754 88888888888888887
Q ss_pred -cCccCC
Q psy6358 374 -GLLCHL 379 (1945)
Q Consensus 374 -G~~C~~ 379 (1945)
|..|+.
T Consensus 77 d~~~C~~ 83 (386)
T 3v65_B 77 DRRSCKA 83 (386)
T ss_dssp TSSCEEE
T ss_pred CCCeECC
Confidence 566654
No 192
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.08 E-value=1.7e-06 Score=108.11 Aligned_cols=67 Identities=28% Similarity=0.672 Sum_probs=60.7
Q ss_pred CCcCCCCCCCCCEeeecCCCceEEeCCCCcc---CCCcccCCCCcccC-CCCCCCCeeeeCCCCeeeeccCCcCCC
Q psy6358 630 YDCDSNPCQNGGFCRSKEGGGYRCDCPPGAT---GTHCELDSRNECYS-NPCQHAGTCEDRIADYACYCLPMWNGK 701 (1945)
Q Consensus 630 ~eC~~~pC~n~g~C~~~~~~~y~C~C~~G~~---G~~Ce~~~~~~C~~-~pC~~~~~C~~~~~~y~C~C~~G~~G~ 701 (1945)
|||.++||.++++|.++. ++|+|.|++||+ |..|+ + +|||.. .||.+ +|+|+.++|.|.|++||++.
T Consensus 1 ~eC~~~~~~c~~~C~~~~-~~y~C~C~~G~~~~~~~~C~-d-ideC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLK-IGYECLCPDGFQLVAQRRCE-D-IDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp CCTTTTGGGCSSEEEECS-SSEEEECCTTEEECSSSCEE-E-CCCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCC
T ss_pred CcccCCCCCCCCEeECCC-CCeEEECCCCCCcCCCCccc-C-chhhhccCCCCC--ccCCCccceeeecccccccc
Confidence 589889998889999999 899999999998 88997 5 999984 68976 89999999999999999875
No 193
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.07 E-value=1.3e-06 Score=109.19 Aligned_cols=66 Identities=35% Similarity=0.813 Sum_probs=36.1
Q ss_pred CCCCCCCCCCCeecCCCCceeeecCCCCC---CCcCccCCCccCCCCCCCCCCCeeeccCCCeEEecCCCccc
Q psy6358 267 DCPGNLCQNGATCMDGINKYSCLCLATYT---GDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTG 336 (1945)
Q Consensus 267 ~C~~~~C~~~~~C~~~~~~y~C~C~~G~~---G~~C~~d~deC~~~~~~C~~~~~C~n~~g~~~C~C~~Gy~G 336 (1945)
||..++|..+++|+++.++|.|.|++||+ |..|+ |+|||. .+.+|++ +|+|+.|+|+|.|++||++
T Consensus 2 eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~-dideC~-~~~~C~~--~C~n~~g~~~C~C~~g~~~ 70 (400)
T 3p5b_L 2 ECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQ-DPDTCSQ--LCVNLEGGYKCQCEEGFQL 70 (400)
T ss_dssp CTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEE-ECCCCS-TTSSCSS--CCBCCSSSCBCCCCTTCCC
T ss_pred cccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCccc-Cchhhh-ccCCCCC--ccCCCccceeeeccccccc
Confidence 45555555555566555566666666665 44552 555654 2345543 5555555555555555554
No 194
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.05 E-value=7.2e-07 Score=111.08 Aligned_cols=72 Identities=28% Similarity=0.774 Sum_probs=13.5
Q ss_pred cCCCCCCCCCCCCCEeecCCCCceeeCCCCCC----CCCCccCCCCCC-CCCCCCCCeEeeCCCCceeecCCCCc----C
Q psy6358 1354 DVDECASDPCLNGGTCEDGLNQFICHCKPGYG----GKRCEFDIDECG-SNPCQHGGICTDHLNGYTCECQIGYT----G 1424 (1945)
Q Consensus 1354 ~~deC~~~~C~~~g~C~~~~g~~~C~C~~Gy~----G~~C~~~id~C~-~~pC~n~g~C~~~~~~~~C~C~~G~~----G 1424 (1945)
++|||..+|+...++|.+..++|+|.|++||+ |+.| .+++||. ..+|.++ |+++.++|+|.|++||+ |
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C-~d~~eC~~~~~C~~~--C~~~~g~~~C~C~~g~~l~~d~ 78 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTC-QDVNECAEEGYCSQG--CTNSEGAFQCWCEAGYELRPDR 78 (386)
T ss_dssp ---------------------------------------------------CCTTE--EC-----CCEECCTTEEECTTS
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCcc-CccceeCCcCcccCc--CCCCCCCCeEEECCCceEcCCC
Confidence 45666665544445666666666666666666 6666 3666664 4566643 66666666666666665 5
Q ss_pred CCCc
Q psy6358 1425 INCE 1428 (1945)
Q Consensus 1425 ~~C~ 1428 (1945)
..|+
T Consensus 79 ~~C~ 82 (386)
T 3v65_B 79 RSCK 82 (386)
T ss_dssp SCEE
T ss_pred CeEC
Confidence 5554
No 195
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.04 E-value=6.3e-07 Score=113.54 Aligned_cols=79 Identities=30% Similarity=0.816 Sum_probs=41.3
Q ss_pred eeecCCCCCccCCCCCCCCCCCCCCCCCCCCEEeeCCCCCceeecCCCCcCCCCCCCCCCCCCCCCCCCeeccCCCCcee
Q psy6358 19 FWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTYEC 98 (1945)
Q Consensus 19 ~~C~C~~g~~g~~C~~~~~~~C~~~~C~ngg~C~~~~~~~~~C~C~~G~~G~~C~~~~~C~~~~C~n~g~C~~~~~~~~C 98 (1945)
...+|..+|.|..|+. +.|.+ +|+| |+|+. .++|.|++||+|..|+ +++|.+ ||.|+|+|++. ++|
T Consensus 377 ~p~~C~~~~~g~~c~~---~~C~~-~C~n-G~C~~----~~~C~C~~G~~G~~C~-~~~C~~-~C~~~g~C~~~---~~C 442 (463)
T 2wg3_C 377 MPEECRATVQPAQTLT---SECSR-LCRN-GYCTP----TGKCCCSPGWEGDFCR-TAKCEP-ACRHGGVCVRP---NKC 442 (463)
T ss_dssp SCGGGCCCCCCCCCCC---CHHHH-HCCS-EEECT----TSCEEECTTEESTTSC-EECC--------------------
T ss_pred ccccCCCCCcCCCCcc---ccccC-CCCC-CccCC----CCeECCCCCcCCCcCC-cCcCCC-CCCCCCEECCC---CEE
Confidence 4589999999999985 46854 7998 79963 3589999999999997 578987 99999999865 689
Q ss_pred ecCCCccCCcccc
Q psy6358 99 DCAPGFVGQTCSE 111 (1945)
Q Consensus 99 ~C~~Gf~G~~C~~ 111 (1945)
.|++||+|..|+.
T Consensus 443 ~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 443 LCKKGYLGPQCEQ 455 (463)
T ss_dssp -------------
T ss_pred ECCCCcccCCCCC
Confidence 9999999999974
No 196
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.04 E-value=2.4e-06 Score=71.31 Aligned_cols=38 Identities=24% Similarity=0.686 Sum_probs=27.7
Q ss_pred cCCCC---CCCCCcEEe--ecCCCeEEecCCCCCCCCCCCCCC
Q psy6358 869 DCAFK---PCRHGGTCI--DLVNAYKCVCQVPYTGHDCHQKLD 906 (1945)
Q Consensus 869 eC~~~---pC~~~g~C~--~~~~~y~C~C~~G~~G~~C~~~~~ 906 (1945)
+|.++ ||+|+|+|+ +..++|+|.|++||+|..|+.+++
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~~ 44 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRDL 44 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTCEECC
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCCcccC
Confidence 56666 888888887 567778888888888877775543
No 197
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=98.02 E-value=2.9e-06 Score=70.92 Aligned_cols=39 Identities=41% Similarity=0.873 Sum_probs=33.6
Q ss_pred ccCCcCCC---CCCCCCcEEeecC--CCeEEecCCCCCCCCCCCC
Q psy6358 865 INIDDCAF---KPCRHGGTCIDLV--NAYKCVCQVPYTGHDCHQK 904 (1945)
Q Consensus 865 ~~ideC~~---~pC~~~g~C~~~~--~~y~C~C~~G~~G~~C~~~ 904 (1945)
++|++|.+ +||+| |+|++.. ++|+|.|++||+|.+|+..
T Consensus 1 ~~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 1 VSITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp CCEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred CccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 36889998 99999 8999855 6899999999999999853
No 198
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=98.02 E-value=1.8e-06 Score=77.70 Aligned_cols=44 Identities=27% Similarity=0.550 Sum_probs=38.7
Q ss_pred CCcCCCCCCCCCcEEee-----cCCCeEEecCCCCCCCCCCCCCCCCCC
Q psy6358 867 IDDCAFKPCRHGGTCID-----LVNAYKCVCQVPYTGHDCHQKLDPCVP 910 (1945)
Q Consensus 867 ideC~~~pC~~~g~C~~-----~~~~y~C~C~~G~~G~~C~~~~~~C~~ 910 (1945)
.|+|.++||+|+|+|++ ..++|+|.|++||+|..|+.+++++..
T Consensus 6 c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~~~ 54 (63)
T 1hae_A 6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQ 54 (63)
T ss_dssp CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSCT
T ss_pred cCCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCcccc
Confidence 47899999999999997 678999999999999999988887754
No 199
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.01 E-value=1.2e-06 Score=77.53 Aligned_cols=47 Identities=26% Similarity=0.615 Sum_probs=39.8
Q ss_pred EEeccCCCccCCCCCCC--CeeeccCCceEEeCCCCCc-CCCCCC-ccccc
Q psy6358 1654 ICEINVPDCLPGACHNN--GTCVDKVGGFECRCPPGFV-GSRWTD-AECFS 1700 (1945)
Q Consensus 1654 ~~eid~~~C~~~~c~~~--~~C~~~~g~~~c~c~~g~~-g~~~~~-~~C~~ 1700 (1945)
.+..++++|+++||+|+ |+|++++++|+|.|++||+ |..|+. ++|..
T Consensus 6 ~~~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~~~~C~~ 56 (61)
T 2k2s_B 6 QLSETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTGNVTCIV 56 (61)
T ss_dssp -CTTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSSCEEEEE
T ss_pred hhcCCCCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCCCCCEecc
Confidence 33457899999999999 8999999999999999999 999963 36653
No 200
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.99 E-value=1.3e-06 Score=77.45 Aligned_cols=40 Identities=33% Similarity=0.718 Sum_probs=37.0
Q ss_pred CCCCcccCCCCCCC--CccccccCCCCeeecCCCCcC-CCccccc
Q psy6358 519 GDINECLSNPCSSH--GTLDCVQLVNNYHCNCRPGYM-GRHCEVK 560 (1945)
Q Consensus 519 ~di~eC~~~pC~~~--~~~~C~~~~~~~~C~C~~G~~-G~~C~~~ 560 (1945)
.++|||+++||.++ ++ |++++++|+|.|++||+ |.+|+..
T Consensus 9 ~~~d~C~snPC~nga~gt--C~~~~g~y~C~C~~Gy~~G~~C~~~ 51 (61)
T 2k2s_B 9 ETPAACSSNPCGPEAAGT--CKETNSGYICRCNQGYRISLDGTGN 51 (61)
T ss_dssp TSCCHHHHCSSCSSSCCE--EEECSSEEEEECCTTEEEEECSSSC
T ss_pred CCCCcCcCCCCcCCCccc--cccCCCceEeECCCCCccCCCCCCC
Confidence 47899999999999 78 99999999999999999 9999865
No 201
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.98 E-value=4.1e-06 Score=69.98 Aligned_cols=38 Identities=42% Similarity=0.869 Sum_probs=32.7
Q ss_pred cCCCCCC---CCCCCCCeeeecC--CceEEeeCCCccCCCcccC
Q psy6358 433 NIDDCAF---KPCRHGGTCIDLV--NAYKCVCQVPYTGHDCHQK 471 (1945)
Q Consensus 433 ~~~~C~~---~~C~~~g~C~~~~--g~y~C~C~~G~~G~~C~~~ 471 (1945)
+|++|.+ +||+| |+|++.. ++|+|.|++||+|.+|++.
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 4667777 99999 8999865 6899999999999999864
No 202
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.95 E-value=2.2e-06 Score=104.68 Aligned_cols=109 Identities=22% Similarity=0.469 Sum_probs=37.5
Q ss_pred CeeccCCCCceeeCCCCCcccccccCCCCcCCCCCCCCCEeeecCCCceEEe-CCCCccCCCcccCCCCcccCCCCCCCC
Q psy6358 603 GVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCD-CPPGATGTHCELDSRNECYSNPCQHAG 681 (1945)
Q Consensus 603 g~C~~~~~~~~C~C~~Gy~G~~C~~~~~eC~~~pC~n~g~C~~~~~~~y~C~-C~~G~~G~~Ce~~~~~~C~~~pC~~~~ 681 (1945)
..|....+++.|.|+.+|+|..||.-.......|++++..|-...+..+.|. |+-++.|..|+.+ ..||+|++
T Consensus 304 s~C~~~~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~------t~~C~ngg 377 (426)
T 3zyj_B 304 TVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNE------LLHCQNGG 377 (426)
T ss_dssp SCEEEETTEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC------------------------
T ss_pred hhcCCCCCCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccC------cccCCCCC
Confidence 5898888889999999999999985333334568887643322222456774 5556678888744 35999999
Q ss_pred eeeeCCCCeeeeccCCcCCCCCCCCCCCCCCCCcCCCccc
Q psy6358 682 TCEDRIADYACYCLPMWNGKNCDLYDPLFRGGLGRDTKKQ 721 (1945)
Q Consensus 682 ~C~~~~~~y~C~C~~G~~G~~C~~~~pc~~~~~c~~~~~~ 721 (1945)
+|.+.. +|+|++||+|..|+. .+|.++|+|.+..++
T Consensus 378 ~C~~~~---~C~C~~G~~G~~Ce~-c~C~~~g~C~~~~Gq 413 (426)
T 3zyj_B 378 TCHNNV---RCLCPAAYTGILCEK-LRCEEAGSCGSDSGQ 413 (426)
T ss_dssp ----------------------------------------
T ss_pred CcCCCC---CCcCCCCCcCCCCcC-CCCCCCCcccCCCCc
Confidence 999877 899999999999986 688889998874433
No 203
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.91 E-value=1.5e-06 Score=74.98 Aligned_cols=43 Identities=37% Similarity=0.865 Sum_probs=29.8
Q ss_pred eeecCCCCCccCCCCCCCCCCCCCCCCCCCCEEeeC---CCCCceeecCCCCcCCCCCC
Q psy6358 19 FWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLK---SLDRYTCTCAPGFTGSQCEL 74 (1945)
Q Consensus 19 ~~C~C~~g~~g~~C~~~~~~~C~~~~C~ngg~C~~~---~~~~~~C~C~~G~~G~~C~~ 74 (1945)
++|.|++||+ ++||+|||+|+.. ..++|+|.|++||+|.+||.
T Consensus 3 ~~C~C~~g~~-------------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 3 PTYKCPETFD-------------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp CCBCCCHHHH-------------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred eeeECCCCCc-------------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 4577777776 4577777777652 23467777777777777764
No 204
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.83 E-value=6.7e-06 Score=100.44 Aligned_cols=61 Identities=31% Similarity=0.742 Sum_probs=3.3
Q ss_pred Cceee-CCCCCCCCCCccCCCCCCCCCCCCCCeEeeCCCCceeecCCCCcCCCCcccCCCCCCCCCCCCCEEeecCC
Q psy6358 1375 QFICH-CKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLVN 1450 (1945)
Q Consensus 1375 ~~~C~-C~~Gy~G~~C~~~id~C~~~pC~n~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~~ 1450 (1945)
.+.|. |+-++.|..|+.++ .||+|+|+|.+.. +|.|++||+|..|+. .+|.++|+|++..|
T Consensus 351 ~~~C~pC~Cn~~g~~CD~~t-----~~C~ngg~C~~~~---~C~C~~G~~G~~Ce~-------c~C~~~g~C~~~~G 412 (426)
T 3zyj_B 351 ANACIPSISSIGTNVCDNEL-----LHCQNGGTCHNNV---RCLCPAAYTGILCEK-------LRCEEAGSCGSDSG 412 (426)
T ss_dssp CCCCCCCCC--------------------------------------------------------------------
T ss_pred CCcccCCCCCCCcCccccCc-----ccCCCCCCcCCCC---CCcCCCCCcCCCCcC-------CCCCCCCcccCCCC
Confidence 33453 44445677776432 5888889998765 899999999988764 36777888877665
No 205
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.44 E-value=5e-05 Score=65.52 Aligned_cols=35 Identities=31% Similarity=0.766 Sum_probs=31.2
Q ss_pred CCCCCCCCeee--ecCCceEEeeCCCccCCCcccCCC
Q psy6358 439 FKPCRHGGTCI--DLVNAYKCVCQVPYTGHDCHQKLD 473 (1945)
Q Consensus 439 ~~~C~~~g~C~--~~~g~y~C~C~~G~~G~~C~~~~d 473 (1945)
++||+|+|+|+ +..++|+|+|++||+|.+|++.+-
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~~~ 47 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRDL 47 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEECS
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcCCc
Confidence 58999999998 778899999999999999987543
No 206
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.32 E-value=6.9e-05 Score=64.62 Aligned_cols=32 Identities=31% Similarity=0.882 Sum_probs=25.5
Q ss_pred CCCCCCCCeee--eCCCCeeeeccCCcCCCCCCC
Q psy6358 674 SNPCQHAGTCE--DRIADYACYCLPMWNGKNCDL 705 (1945)
Q Consensus 674 ~~pC~~~~~C~--~~~~~y~C~C~~G~~G~~C~~ 705 (1945)
++||+|+|+|+ +..++|+|.|++||+|++|+.
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~ 44 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY 44 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCc
Confidence 56888888887 677788888888888888875
No 207
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=97.09 E-value=0.00032 Score=71.80 Aligned_cols=58 Identities=26% Similarity=0.582 Sum_probs=43.3
Q ss_pred CCCCCcEEeecC--CCe-EEecCCCCCCCCCCCCCCCCCCCCCCCCCeeccCCCCCCeeeecCCCCccCCCC
Q psy6358 874 PCRHGGTCIDLV--NAY-KCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQDFACHCGVGWTGRYCN 942 (1945)
Q Consensus 874 pC~~~g~C~~~~--~~y-~C~C~~G~~G~~C~~~~~~C~~~~C~~g~~C~~~~~~~~~~C~C~~G~~G~~C~ 942 (1945)
||+|||+|++.+ .+| +|.|++||+|..|+++++ .+|.++ +..+|.+.+..+++|..|.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~----~~C~~g-------~G~~YrG~~~~t~sG~~Cq 62 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS----KTCYEG-------NGHFYRGKASTDTMGRPCL 62 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS----CCSBCS-------SCTTCCSCCCBBTTSCBBC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc----CCCccc-------ccccceeeccccccCCccc
Confidence 799999998875 566 899999999999987654 234432 1346788888888888775
No 208
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=97.04 E-value=0.0004 Score=71.10 Aligned_cols=59 Identities=32% Similarity=0.731 Sum_probs=43.6
Q ss_pred CCCCCCEeecCC--CCc-eeeCCCCCCCCCCccCCCCCCCCCCCCCCeEeeCCCCceeecCCCCcCCCCcc
Q psy6358 1362 PCLNGGTCEDGL--NQF-ICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEI 1429 (1945)
Q Consensus 1362 ~C~~~g~C~~~~--g~~-~C~C~~Gy~G~~C~~~id~C~~~pC~n~g~C~~~~~~~~C~C~~G~~G~~C~~ 1429 (1945)
||.|+|+|++.. .+| +|.|++||+|.+|+++++ .+|..+ ...+|++.+..+++|..|+.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~----~~C~~g-----~G~~YrG~~~~t~sG~~Cq~ 63 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS----KTCYEG-----NGHFYRGKASTDTMGRPCLP 63 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS----CCSBCS-----SCTTCCSCCCBBTTSCBBCC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc----CCCccc-----ccccceeeccccccCCcccC
Confidence 688888888874 556 899999999988887654 245432 23468888888888888874
No 209
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.60 E-value=0.0011 Score=60.93 Aligned_cols=37 Identities=30% Similarity=0.693 Sum_probs=30.7
Q ss_pred cCCCccCCCCCCCCCCCeeeccCCCeEEe-cCCCcccC
Q psy6358 301 QDVDECSIRPSVCHNGATCTNSVGGFSCI-CVNGWTGP 337 (1945)
Q Consensus 301 ~d~deC~~~~~~C~~~~~C~n~~g~~~C~-C~~Gy~G~ 337 (1945)
+|||||...+++|.++++|+|++|+|+|. +..||++.
T Consensus 1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~ 38 (71)
T 2kl7_A 1 SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIND 38 (71)
T ss_dssp CCSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSC
T ss_pred CccccccCCCCCCCCCCEeECCCCCeEecccCCccccc
Confidence 37899988778898888999999999997 55788764
No 210
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.58 E-value=0.0011 Score=57.15 Aligned_cols=34 Identities=29% Similarity=0.891 Sum_probs=29.4
Q ss_pred ccCCCccC----------CCCCCCCeeeccCCceEEeCCCCCcCCC
Q psy6358 1657 INVPDCLP----------GACHNNGTCVDKVGGFECRCPPGFVGSR 1692 (1945)
Q Consensus 1657 id~~~C~~----------~~c~~~~~C~~~~g~~~c~c~~g~~g~~ 1692 (1945)
+|++||.. .||. ++|+|++|+|.|.|++||++..
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~~ 45 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQE 45 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEECT
T ss_pred CccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeECC
Confidence 58899975 5896 5999999999999999999753
No 211
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.57 E-value=0.00064 Score=59.70 Aligned_cols=30 Identities=33% Similarity=0.769 Sum_probs=13.9
Q ss_pred CCCCCCEeeec---CCCceEEeCCCCccCCCcc
Q psy6358 636 PCQNGGFCRSK---EGGGYRCDCPPGATGTHCE 665 (1945)
Q Consensus 636 pC~n~g~C~~~---~~~~y~C~C~~G~~G~~Ce 665 (1945)
||+|||+|... ..++|.|.|++||+|.+||
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce 47 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCc
Confidence 55555555521 1134455555555555554
No 212
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.55 E-value=0.00084 Score=72.47 Aligned_cols=42 Identities=21% Similarity=0.629 Sum_probs=35.1
Q ss_pred CCCCCCCCCCCCeeeecCCceEEeeCCCccCCCcccCCCCCcC
Q psy6358 435 DDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVP 477 (1945)
Q Consensus 435 ~~C~~~~C~~~g~C~~~~g~y~C~C~~G~~G~~C~~~~d~C~~ 477 (1945)
++|..+||+++|+|++..++|+|.|++||+|..|+.. ++|..
T Consensus 120 ~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~-~~c~~ 161 (162)
T 1g1s_A 120 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYV-RDDDD 161 (162)
T ss_dssp CCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEE-CC---
T ss_pred CCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccC-cccCC
Confidence 4577889999999999999999999999999999866 47753
No 213
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.50 E-value=0.0015 Score=56.23 Aligned_cols=25 Identities=28% Similarity=0.725 Sum_probs=22.3
Q ss_pred CCCCCCCeeeecCCceEEeeCCCccCC
Q psy6358 440 KPCRHGGTCIDLVNAYKCVCQVPYTGH 466 (1945)
Q Consensus 440 ~~C~~~g~C~~~~g~y~C~C~~G~~G~ 466 (1945)
+||+ ++|+|++|+|+|.|++||++.
T Consensus 20 ~~C~--~~C~n~~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 20 PQCQ--HLCHNYVGGYFCSCRPGYELQ 44 (53)
T ss_dssp CTTS--SEEEEETTEEEEECSTTCEEC
T ss_pred CCCC--CEeECCCCCeEEECCCCCeEC
Confidence 5786 499999999999999999864
No 214
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.49 E-value=0.00085 Score=58.94 Aligned_cols=31 Identities=26% Similarity=0.789 Sum_probs=27.1
Q ss_pred CCCCCCeee--e--cCCceEEeeCCCccCCCcccC
Q psy6358 441 PCRHGGTCI--D--LVNAYKCVCQVPYTGHDCHQK 471 (1945)
Q Consensus 441 ~C~~~g~C~--~--~~g~y~C~C~~G~~G~~C~~~ 471 (1945)
||+|+|+|+ + ..++|.|.|++||+|.+|+..
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~ 49 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCccc
Confidence 899999998 4 456899999999999999753
No 215
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.41 E-value=0.00087 Score=72.34 Aligned_cols=41 Identities=27% Similarity=0.776 Sum_probs=27.3
Q ss_pred CCcccCCCCCCCCeeeeCCCCeeeeccCCcCCCCCCCCCCC
Q psy6358 669 RNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCDLYDPL 709 (1945)
Q Consensus 669 ~~~C~~~pC~~~~~C~~~~~~y~C~C~~G~~G~~C~~~~pc 709 (1945)
+++|.++||+++++|++..++|+|.|++||+|.+||+.+.|
T Consensus 119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~~~c 159 (162)
T 1g1s_A 119 TASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDD 159 (162)
T ss_dssp ECCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEECC-
T ss_pred eCCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccCccc
Confidence 34666677777777777777777777777777777654333
No 216
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.18 E-value=0.0021 Score=55.94 Aligned_cols=41 Identities=24% Similarity=0.684 Sum_probs=29.5
Q ss_pred CccCCCCCCCCCCCeeeccCCCeEEecCCCcc----cCCCCCCCCCCC
Q psy6358 304 DECSIRPSVCHNGATCTNSVGGFSCICVNGWT----GPDCSLNIDDCA 347 (1945)
Q Consensus 304 deC~~~~~~C~~~~~C~n~~g~~~C~C~~Gy~----G~~C~~~id~C~ 347 (1945)
|||......|+. .|+|++|+|+|.|++||+ |..| ++||+|.
T Consensus 2 dEC~~~~~~C~~--~C~nt~Gsy~C~C~~Gy~L~~d~~~C-~didec~ 46 (55)
T 2jkh_L 2 KLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKAC-IPTGPYP 46 (55)
T ss_dssp CCTTTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSCE-EESSSSC
T ss_pred ccccCCCCCcCc--EeEcCCCCeEEeCCCCCEECCCCCee-ccCcccc
Confidence 677766667864 788888888899988887 3445 3666653
No 217
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.01 E-value=0.0031 Score=57.89 Aligned_cols=34 Identities=18% Similarity=0.569 Sum_probs=26.0
Q ss_pred cCCCCC--CCCCCCCCeeeecCCceEEee-CCCccCC
Q psy6358 433 NIDDCA--FKPCRHGGTCIDLVNAYKCVC-QVPYTGH 466 (1945)
Q Consensus 433 ~~~~C~--~~~C~~~g~C~~~~g~y~C~C-~~G~~G~ 466 (1945)
+||||. .++|.++++|+|++|+|+|.+ ..||++.
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~ 38 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIND 38 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSC
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCccccc
Confidence 344554 367999999999999999984 4688754
No 218
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=95.92 E-value=0.0029 Score=81.15 Aligned_cols=37 Identities=38% Similarity=0.948 Sum_probs=34.3
Q ss_pred CCcccCCCCCCCCeeee-CCCCeeeecc-CCcCCCCCCC
Q psy6358 669 RNECYSNPCQHAGTCED-RIADYACYCL-PMWNGKNCDL 705 (1945)
Q Consensus 669 ~~~C~~~pC~~~~~C~~-~~~~y~C~C~-~G~~G~~C~~ 705 (1945)
+|+|.++||+|+|+|++ .+++|+|.|+ +||+|.+||.
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 57899999999999999 8999999999 9999999986
No 219
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=95.89 E-value=0.0027 Score=81.54 Aligned_cols=38 Identities=32% Similarity=1.034 Sum_probs=32.2
Q ss_pred CCcCCCCCCCCCcEEee-cCCCeEEecC-CCCCCCCCCCC
Q psy6358 867 IDDCAFKPCRHGGTCID-LVNAYKCVCQ-VPYTGHDCHQK 904 (1945)
Q Consensus 867 ideC~~~pC~~~g~C~~-~~~~y~C~C~-~G~~G~~C~~~ 904 (1945)
+|+|.++||+|+|+|++ ..++|+|.|+ +||+|.+|+..
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 41 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP 41 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCC
Confidence 57888899999999988 8888888888 88888888753
No 220
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=95.86 E-value=0.0038 Score=80.11 Aligned_cols=37 Identities=41% Similarity=0.955 Sum_probs=26.2
Q ss_pred CCcccCCCCCCCCeeee-CCCCeeeecc-CCcCCCCCCC
Q psy6358 669 RNECYSNPCQHAGTCED-RIADYACYCL-PMWNGKNCDL 705 (1945)
Q Consensus 669 ~~~C~~~pC~~~~~C~~-~~~~y~C~C~-~G~~G~~C~~ 705 (1945)
+|+|.++||+|+|+|++ ..++|+|.|+ +||+|++|+.
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 35677777777777774 4567777777 7777777776
No 221
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=95.71 E-value=0.005 Score=56.08 Aligned_cols=43 Identities=26% Similarity=0.597 Sum_probs=32.2
Q ss_pred cCCCccCCCCCCCCCCCeeeccCC-CeEEecCCCcc----cCCCCCCCCCC
Q psy6358 301 QDVDECSIRPSVCHNGATCTNSVG-GFSCICVNGWT----GPDCSLNIDDC 346 (1945)
Q Consensus 301 ~d~deC~~~~~~C~~~~~C~n~~g-~~~C~C~~Gy~----G~~C~~~id~C 346 (1945)
.|+|||+.....|+. .|+|+.| +|+|.|++||. |..| .+++||
T Consensus 3 ~d~~eC~~~nggC~h--~C~n~~g~s~~C~C~~Gy~L~~D~~tC-~d~dec 50 (69)
T 1kli_L 3 DDQLICVNENGGCEQ--YCSDHTGTKRSCRCHEGYSLLADGVSC-TPTVEY 50 (69)
T ss_dssp SCCCCTTSGGGGCSS--EEEEETTTEEEEECCTTEEECTTSSCE-EECSSS
T ss_pred cccccccCCCCCcCC--EeEcCCCCCEEEeCCCCCeECCCCCcc-cCcccc
Confidence 578889876677875 7999888 79999999986 3445 356665
No 222
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=95.67 E-value=0.0077 Score=63.37 Aligned_cols=60 Identities=30% Similarity=0.592 Sum_probs=43.0
Q ss_pred CCCCCCEeeecC-CCce-EEeCCCCccCCCcccCCCCcccCCCCCCCCeeeeCCCCeeeeccCCcCCCCCCC
Q psy6358 636 PCQNGGFCRSKE-GGGY-RCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCDL 705 (1945)
Q Consensus 636 pC~n~g~C~~~~-~~~y-~C~C~~G~~G~~Ce~~~~~~C~~~pC~~~~~C~~~~~~y~C~C~~G~~G~~C~~ 705 (1945)
||+|||+|++.. ..+| +|.|++||+|.+|+++ +++ +|.++ .-..|.......++|..|..
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~-~~~----~C~~g-----~G~~YrG~~s~T~sG~~Cq~ 75 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID-KSK----TCYEG-----NGHFYRGKASTDTMGRPCLP 75 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEE-SSC----CEECT-----TCTTCCSCCCBBTTSCBCCC
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceecc-ccc----cCCCC-----CccccccceecCCcCCcccC
Confidence 999999998752 1456 8999999999999976 432 33332 11357777777788877764
No 223
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=95.64 E-value=0.0044 Score=79.52 Aligned_cols=37 Identities=46% Similarity=0.946 Sum_probs=33.5
Q ss_pred CCCcCCCCCCCCCEeeecCCCceEEeCC-CCccCCCcc
Q psy6358 629 GYDCDSNPCQNGGFCRSKEGGGYRCDCP-PGATGTHCE 665 (1945)
Q Consensus 629 ~~eC~~~pC~n~g~C~~~~~~~y~C~C~-~G~~G~~Ce 665 (1945)
+++|.++||+|||+|++...++|+|.|+ +||+|.+||
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 38 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCC
Confidence 5899999999999999643389999999 999999997
No 224
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=95.64 E-value=0.0024 Score=73.76 Aligned_cols=37 Identities=30% Similarity=0.681 Sum_probs=27.0
Q ss_pred cCCCccCCCCCCCCCCCeeeccCCCeEEecCCCcccC
Q psy6358 301 QDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGP 337 (1945)
Q Consensus 301 ~d~deC~~~~~~C~~~~~C~n~~g~~~C~C~~Gy~G~ 337 (1945)
+|+|||..+.+.|+.++.|+|+.|+|.|.|++||+|+
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~Gn 39 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGN 39 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEEC
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCC
Confidence 4788887767788888888888888888888888864
No 225
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=95.49 E-value=0.0085 Score=57.49 Aligned_cols=68 Identities=22% Similarity=0.575 Sum_probs=49.1
Q ss_pred CCCCCCCCCCeecC-CCCceeeecCCCCCCC--cCccCC-CccCCCCCCCCCCCeeeccC-----CCeEEecCCCcc
Q psy6358 268 CPGNLCQNGATCMD-GINKYSCLCLATYTGD--LCEQDV-DECSIRPSVCHNGATCTNSV-----GGFSCICVNGWT 335 (1945)
Q Consensus 268 C~~~~C~~~~~C~~-~~~~y~C~C~~G~~G~--~C~~d~-deC~~~~~~C~~~~~C~n~~-----g~~~C~C~~Gy~ 335 (1945)
|....|..+|.|.. ..+.+.|.|.+||.|+ .|.++. +.|+.+...|..+|.|+.+. +...|+|.+||.
T Consensus 7 C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 7 CVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp CCSCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred eccCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 34455677788876 4678889999999765 565443 57877777888888888664 567888888854
No 226
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=95.41 E-value=0.011 Score=62.20 Aligned_cols=58 Identities=33% Similarity=0.784 Sum_probs=37.4
Q ss_pred CCCCCCEeecC--CCCc-eeeCCCCCCCCCCccCCCCCCCCCCCCCCeEeeCCCCceeecCCCCcCCCCc
Q psy6358 1362 PCLNGGTCEDG--LNQF-ICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCE 1428 (1945)
Q Consensus 1362 ~C~~~g~C~~~--~g~~-~C~C~~Gy~G~~C~~~id~C~~~pC~n~g~C~~~~~~~~C~C~~G~~G~~C~ 1428 (1945)
||+|+|+|+.. ...| +|.|++||+|++|++++++ +|.++ ....|+......++|..|+
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~----~C~~g-----~G~~YrG~~s~T~sG~~Cq 74 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSK----TCYEG-----NGHFYRGKASTDTMGRPCL 74 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSC----CEECT-----TCTTCCSCCCBBTTSCBCC
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceeccccc----cCCCC-----CccccccceecCCcCCccc
Confidence 68888888765 2455 7888888888888766542 33332 1225666666666777665
No 227
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=95.02 E-value=0.0058 Score=70.61 Aligned_cols=35 Identities=29% Similarity=0.764 Sum_probs=28.7
Q ss_pred ccCCCcc--CCCCCCCCeeeccCCceEEeCCCCCcCC
Q psy6358 1657 INVPDCL--PGACHNNGTCVDKVGGFECRCPPGFVGS 1691 (1945)
Q Consensus 1657 id~~~C~--~~~c~~~~~C~~~~g~~~c~c~~g~~g~ 1691 (1945)
.|+|||+ ..+|+.+|+|+|++|+|.|.|++||+|.
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~Gn 39 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGN 39 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEEC
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCC
Confidence 4889997 5699999999999999999999999964
No 228
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=94.84 E-value=0.017 Score=48.74 Aligned_cols=35 Identities=34% Similarity=0.869 Sum_probs=28.3
Q ss_pred CCCCCCCCEEeeC-CCCCceeecCCCCcCCCCCCCCC
Q psy6358 42 SFPCMNGGTCTLK-SLDRYTCTCAPGFTGSQCELQDH 77 (1945)
Q Consensus 42 ~~~C~ngg~C~~~-~~~~~~C~C~~G~~G~~C~~~~~ 77 (1945)
.+.|.|| +|... ..+.++|.|++||+|.+|+..|-
T Consensus 13 ~~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~~dL 48 (50)
T 3e50_C 13 TQFCFHG-TCRFLVQEDKPACVCHSGYVGARCEHADL 48 (50)
T ss_pred cCcccCC-EEeeccCCCCeEEECCCCCcccCCCceee
Confidence 5789987 99853 45678999999999999987653
No 229
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=94.82 E-value=0.0097 Score=63.63 Aligned_cols=38 Identities=29% Similarity=0.871 Sum_probs=34.3
Q ss_pred CCCCCCCCCCCCeeeecCCceEEeeCCCccCCCcccCC
Q psy6358 435 DDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKL 472 (1945)
Q Consensus 435 ~~C~~~~C~~~g~C~~~~g~y~C~C~~G~~G~~C~~~~ 472 (1945)
..|.++||+++|+|.+..++|.|.|.+||+|+.||++|
T Consensus 120 ~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~~ 157 (157)
T 1g1t_A 120 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIV 157 (157)
T ss_dssp CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEEC
T ss_pred CCCCCCCCCCCCEeecCCCCeeEECCCCccCccccccC
Confidence 45667899999999999999999999999999998764
No 230
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=94.73 E-value=0.0091 Score=51.85 Aligned_cols=39 Identities=26% Similarity=0.531 Sum_probs=31.4
Q ss_pred CCCCC--CCCCCCCeeccCCCCeeeeCCCCCc----cCccCCCCccc
Q psy6358 344 DDCAG--AACFNGATCIDRVGSFYCQCTPGKT----GLLCHLEDACT 384 (1945)
Q Consensus 344 d~C~~--~~C~~~~~C~~~~g~~~C~C~~G~~----G~~C~~~d~C~ 384 (1945)
|||.. .+|. ..|+|++|+|+|.|++||+ |..|+++|+|.
T Consensus 2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~ 46 (55)
T 2jkh_L 2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLADNGKACIPTGPYP 46 (55)
T ss_dssp CCTTTGGGGCS--SEEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence 56654 3575 3899999999999999996 78899888763
No 231
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=94.19 E-value=0.054 Score=45.79 Aligned_cols=32 Identities=28% Similarity=0.822 Sum_probs=25.7
Q ss_pred CCCCCCCCEEe-eCCCCCceeecCCCCcCCCCCC
Q psy6358 42 SFPCMNGGTCT-LKSLDRYTCTCAPGFTGSQCEL 74 (1945)
Q Consensus 42 ~~~C~ngg~C~-~~~~~~~~C~C~~G~~G~~C~~ 74 (1945)
.+.|.|| +|. +...+.+.|+|++||+|.+|+.
T Consensus 17 ~~yC~nG-~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 17 QNFCIHG-ECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GGTCSSS-EEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred hCcCCCC-EEEEecCCCCeeEECCCCcccccccc
Confidence 4788874 997 4456678999999999999974
No 232
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=94.01 E-value=0.018 Score=52.36 Aligned_cols=42 Identities=24% Similarity=0.521 Sum_probs=34.2
Q ss_pred CCCCCCCCC--CCCCCCeeccCCC-CeeeeCCCCCc----cCccCCCCccc
Q psy6358 341 LNIDDCAGA--ACFNGATCIDRVG-SFYCQCTPGKT----GLLCHLEDACT 384 (1945)
Q Consensus 341 ~~id~C~~~--~C~~~~~C~~~~g-~~~C~C~~G~~----G~~C~~~d~C~ 384 (1945)
++++||... .|.. .|+++.+ +|+|.|++||. |..|.++++|.
T Consensus 3 ~d~~eC~~~nggC~h--~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~ 51 (69)
T 1kli_L 3 DDQLICVNENGGCEQ--YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 51 (69)
T ss_dssp SCCCCTTSGGGGCSS--EEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred cccccccCCCCCcCC--EeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence 578899753 4643 6999998 89999999996 78999988763
No 233
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=94.00 E-value=0.03 Score=68.13 Aligned_cols=22 Identities=27% Similarity=0.637 Sum_probs=18.4
Q ss_pred cCCCCeeecCCCCcCCCccccc
Q psy6358 539 QLVNNYHCNCRPGYMGRHCEVK 560 (1945)
Q Consensus 539 ~~~~~~~C~C~~G~~G~~C~~~ 560 (1945)
+..+.+.|.|++||+|..|+.-
T Consensus 267 ~~~~~~~C~C~~nt~G~~Ce~C 288 (375)
T 4aqt_A 267 NEFDKLMCNCKHNTYGVDCEKC 288 (375)
T ss_dssp CTTSCEEECCCTTEESTTSCEE
T ss_pred CCCCCeeeeCcCCCcCCCcccC
Confidence 4456789999999999999864
No 234
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=94.00 E-value=0.021 Score=48.33 Aligned_cols=33 Identities=27% Similarity=0.816 Sum_probs=26.8
Q ss_pred CCCCCCCCEEe-eCCCCCceeecCCCCcCCCCCCC
Q psy6358 42 SFPCMNGGTCT-LKSLDRYTCTCAPGFTGSQCELQ 75 (1945)
Q Consensus 42 ~~~C~ngg~C~-~~~~~~~~C~C~~G~~G~~C~~~ 75 (1945)
.+.|.| |+|. ....+.+.|+|++||+|.+||..
T Consensus 13 ~~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 13 KHYCIK-GRCRFVVAEQTPSCVCDEGYIGARCERV 46 (50)
T ss_dssp TTSCTT-CCEEEETTTTEEEECCCTTEETTTTCEE
T ss_pred cCcccC-CEEEeEcCCCCeEEECCCCcccCCCCee
Confidence 578999 7895 44566789999999999999864
No 235
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=93.86 E-value=0.017 Score=61.61 Aligned_cols=37 Identities=30% Similarity=0.878 Sum_probs=32.1
Q ss_pred CcCCCCCCCCCcEEeecCCCeEEecCCCCCCCCCCCC
Q psy6358 868 DDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQK 904 (1945)
Q Consensus 868 deC~~~pC~~~g~C~~~~~~y~C~C~~G~~G~~C~~~ 904 (1945)
++|.++||.++|+|.+....|.|.|.+||+|..||++
T Consensus 120 ~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 120 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence 5677788998999999999999999999999999864
No 236
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=93.76 E-value=0.031 Score=67.98 Aligned_cols=30 Identities=20% Similarity=0.423 Sum_probs=18.6
Q ss_pred CCCCcEEecCCCcccCccCccccCCCCCCC
Q psy6358 1107 DPGTFRCVCMPGFTGTQCETDIDECASNPC 1136 (1945)
Q Consensus 1107 ~~g~~~C~C~~Gy~G~~C~~~ideC~~~pC 1136 (1945)
..+.+.|.|.+||+|.+|+.-.+.....|+
T Consensus 268 ~~~~~~C~C~~nt~G~~Ce~C~~gy~~~p~ 297 (375)
T 4aqt_A 268 EFDKLMCNCKHNTYGVDCEKCLPFFNDRPW 297 (375)
T ss_dssp TTSCEEECCCTTEESTTSCEECTTCCSSCC
T ss_pred CCCCeeeeCcCCCcCCCcccCCCCCcCCCC
Confidence 345667888888888888753333333344
No 237
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=93.71 E-value=0.023 Score=52.42 Aligned_cols=36 Identities=33% Similarity=0.893 Sum_probs=26.7
Q ss_pred CCCC---CCCCCCCCEEee-CCCCCceeecCCCCcCCCCCC
Q psy6358 38 NSCD---SFPCMNGGTCTL-KSLDRYTCTCAPGFTGSQCEL 74 (1945)
Q Consensus 38 ~~C~---~~~C~ngg~C~~-~~~~~~~C~C~~G~~G~~C~~ 74 (1945)
++|. .+.|+|| +|.. ...+.+.|.|.+||+|.+|+.
T Consensus 38 ~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 38 DPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp -CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEESTTCCE
T ss_pred CCCCccccCcCCCC-EeeeecCCCCeEEEcCCCcccccccc
Confidence 4565 6889986 8953 334678899999999999874
No 238
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=93.35 E-value=0.085 Score=50.95 Aligned_cols=66 Identities=20% Similarity=0.351 Sum_probs=42.6
Q ss_pred CCCCCCCCCCeecC-CCCceeeecCCCCCCC--cCccCCCc-cCCCCCCCCCCCeeeccC-CCeEEecCCCc
Q psy6358 268 CPGNLCQNGATCMD-GINKYSCLCLATYTGD--LCEQDVDE-CSIRPSVCHNGATCTNSV-GGFSCICVNGW 334 (1945)
Q Consensus 268 C~~~~C~~~~~C~~-~~~~y~C~C~~G~~G~--~C~~d~de-C~~~~~~C~~~~~C~n~~-g~~~C~C~~Gy 334 (1945)
|...-|..++.|.. ..|...|.|..||.|+ .|.++ +. |..+...|..+|.|+.+. ..-.|.|..||
T Consensus 13 C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~-Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~ 83 (105)
T 1n1i_A 13 CIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA-SITCEENNGGCAPEAECTMDDKKEVECKCTKEG 83 (105)
T ss_dssp CCSSCCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC-CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred ecCCCCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC-CcchhhcCCCcCCCcEeEECCCCEEEeECCCCC
Confidence 43344566677765 4566778888888654 56544 55 666556677777777664 56677777764
No 239
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=92.92 E-value=0.028 Score=47.91 Aligned_cols=18 Identities=22% Similarity=0.757 Sum_probs=10.7
Q ss_pred eeeccCCCeEEecCCCcc
Q psy6358 318 TCTNSVGGFSCICVNGWT 335 (1945)
Q Consensus 318 ~C~n~~g~~~C~C~~Gy~ 335 (1945)
.|+|++|+|+|.|++||+
T Consensus 11 ~C~n~~gs~~C~C~~Gy~ 28 (51)
T 1kig_L 11 FCREERSEVRCSCAHGYV 28 (51)
T ss_dssp CCCEETTEECCCCCTTEE
T ss_pred EeEcCCCCeEEeCCCCcE
Confidence 456666666666666664
No 240
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=92.81 E-value=0.099 Score=50.26 Aligned_cols=67 Identities=27% Similarity=0.607 Sum_probs=51.4
Q ss_pred CCCCCCCCCCeeccCCCCccccccCCCcCCC--CccccC-CCCCCC--CCCCCCeecCCC-----CceeeecCCCCC
Q psy6358 229 CDPSPCQNGGVCRELDNLNYECECQSGYRGK--NCEENI-DDCPGN--LCQNGATCMDGI-----NKYSCLCLATYT 295 (1945)
Q Consensus 229 C~~~~C~n~g~C~~~~~~~~~C~C~~G~~G~--~C~~~~-d~C~~~--~C~~~~~C~~~~-----~~y~C~C~~G~~ 295 (1945)
|...-|..++.|.....+..+|.|.+||.|+ .|..+. ..|..+ -|..+|+|+... +..+|.|.+||.
T Consensus 7 C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 7 CVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp CCSCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred eccCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 3445566788997666788999999999854 677643 578753 499999999764 679999999975
No 241
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=92.64 E-value=0.04 Score=50.91 Aligned_cols=35 Identities=37% Similarity=0.867 Sum_probs=16.2
Q ss_pred CCcCC---CCCCCCCcEEe--ecCCCeEEecCCCCCCCCCC
Q psy6358 867 IDDCA---FKPCRHGGTCI--DLVNAYKCVCQVPYTGHDCH 902 (1945)
Q Consensus 867 ideC~---~~pC~~~g~C~--~~~~~y~C~C~~G~~G~~C~ 902 (1945)
.++|. .+.|+|| +|+ ...+.+.|.|++||+|..|+
T Consensus 37 ~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE 76 (79)
T 1xdt_R 37 RDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGERCH 76 (79)
T ss_dssp --CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEESTTCC
T ss_pred CCCCCccccCcCCCC-EeeeecCCCCeEEEcCCCccccccc
Confidence 35555 4455553 552 33344555555555555554
No 242
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=92.56 E-value=0.053 Score=45.91 Aligned_cols=32 Identities=28% Similarity=0.624 Sum_probs=26.8
Q ss_pred CCCCCCCCeee--ecCCceEEeeCCCccCCCcccC
Q psy6358 439 FKPCRHGGTCI--DLVNAYKCVCQVPYTGHDCHQK 471 (1945)
Q Consensus 439 ~~~C~~~g~C~--~~~g~y~C~C~~G~~G~~C~~~ 471 (1945)
.+.|.| |+|. ...+.+.|+|++||+|.+|+..
T Consensus 13 ~~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 13 KHYCIK-GRCRFVVAEQTPSCVCDEGYIGARCERV 46 (50)
T ss_dssp TTSCTT-CCEEEETTTTEEEECCCTTEETTTTCEE
T ss_pred cCcccC-CEEEeEcCCCCeEEECCCCcccCCCCee
Confidence 367999 7996 5567899999999999999854
No 243
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=92.26 E-value=0.17 Score=48.94 Aligned_cols=67 Identities=22% Similarity=0.473 Sum_probs=52.8
Q ss_pred CCCCCCeeec-cCCCeEEecCCCcccC--CCCCCCCC-CCCC--CCCCCCeeccCC-CCeeeeCCCCCc-----cCccCC
Q psy6358 312 VCHNGATCTN-SVGGFSCICVNGWTGP--DCSLNIDD-CAGA--ACFNGATCIDRV-GSFYCQCTPGKT-----GLLCHL 379 (1945)
Q Consensus 312 ~C~~~~~C~n-~~g~~~C~C~~Gy~G~--~C~~~id~-C~~~--~C~~~~~C~~~~-g~~~C~C~~G~~-----G~~C~~ 379 (1945)
.|..+|.|.. .+|...|+|..||.|+ .|..+ +. |..+ .|..+|.|+... ..-.|.|.++|. |.+|..
T Consensus 17 ~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~-Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~~~~GvfC~~ 95 (105)
T 1n1i_A 17 NVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA-SITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEPLFEGVFCSS 95 (105)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC-CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCEEGGGTEECC
T ss_pred CCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC-CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCccccceEEECC
Confidence 5788899988 7899999999999976 46544 55 6543 599999998774 788999999964 666654
No 244
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=92.23 E-value=0.083 Score=56.74 Aligned_cols=38 Identities=32% Similarity=0.856 Sum_probs=31.5
Q ss_pred CCCCCCCCCCeeeecCCceEEeeCCCccCCCcccCCCCC
Q psy6358 437 CAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPC 475 (1945)
Q Consensus 437 C~~~~C~~~g~C~~~~g~y~C~C~~G~~G~~C~~~~d~C 475 (1945)
|..++|+++|+|.+..++|+|.|++||+|..|+. +.+|
T Consensus 122 ~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~-~~~c 159 (164)
T 3cfw_A 122 CQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQF-VQVD 159 (164)
T ss_dssp CCTTSSCSSEEEEEETTEEEEEECTTCBSSSSCB-C---
T ss_pred CCCCcCCCCCeecccCCCceeeeCCCcccccccc-cccC
Confidence 5568899999999999999999999999999964 3444
No 245
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=92.17 E-value=0.097 Score=44.25 Aligned_cols=30 Identities=27% Similarity=0.767 Sum_probs=20.0
Q ss_pred CCCCCCCeee--eCCCCeeeeccCCcCCCCCCC
Q psy6358 675 NPCQHAGTCE--DRIADYACYCLPMWNGKNCDL 705 (1945)
Q Consensus 675 ~pC~~~~~C~--~~~~~y~C~C~~G~~G~~C~~ 705 (1945)
+.|.|| +|. ..++.+.|.|++||+|..|+.
T Consensus 18 ~yC~nG-~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIHG-ECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSSS-EEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCCC-EEEEecCCCCeeEECCCCcccccccc
Confidence 466664 775 455667777777777777663
No 246
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=92.11 E-value=0.066 Score=45.99 Aligned_cols=34 Identities=26% Similarity=0.727 Sum_probs=20.3
Q ss_pred CCCCCCCCeeeccCC-CeEEecCCCcc----cCCCCCCCCCC
Q psy6358 310 PSVCHNGATCTNSVG-GFSCICVNGWT----GPDCSLNIDDC 346 (1945)
Q Consensus 310 ~~~C~~~~~C~n~~g-~~~C~C~~Gy~----G~~C~~~id~C 346 (1945)
...|+. .|+|+.| +|+|.|++||+ |..|. ++|||
T Consensus 6 nggC~~--~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~-d~dec 44 (53)
T 2bz6_L 6 NGGCEQ--YCSDHTGTKRSCRCHEGYSLLADGVSCT-PTVEY 44 (53)
T ss_dssp GGGCSS--EEEEETTTEEEEECCTTEEECTTSSCEE-ECSSS
T ss_pred CCCcCC--EeEcCCCCCEEeeCCCCCEECCCCCccc-CCccc
Confidence 344543 5777777 57777777776 33442 55555
No 247
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=91.86 E-value=0.05 Score=58.99 Aligned_cols=41 Identities=41% Similarity=1.053 Sum_probs=34.6
Q ss_pred CCCccCCCCccCcccCCCC----CCCCCCeeeeCCCCeEeeCCCCcc
Q psy6358 934 VGWTGRYCNEDVDECQLSS----PCRNGATCHNTNGSYLCECAKGYE 976 (1945)
Q Consensus 934 ~G~~G~~C~~dideC~~~~----~C~~~~~C~n~~gsy~C~C~~Gy~ 976 (1945)
.||.+.+...|++||.... +|.+ .|+|+.|+|+|.|++||+
T Consensus 113 ~Gf~~~~~~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 113 TGFEAFYAAEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYV 157 (170)
T ss_dssp CEEEEEEEEEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEE
T ss_pred cCceeeeeccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcE
Confidence 6888888888999998432 2865 799999999999999998
No 248
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=91.79 E-value=0.072 Score=57.24 Aligned_cols=35 Identities=29% Similarity=0.795 Sum_probs=26.4
Q ss_pred cccCCCCCCCCeeeeCCCCeeeeccCCcCCCCCCC
Q psy6358 671 ECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCDL 705 (1945)
Q Consensus 671 ~C~~~pC~~~~~C~~~~~~y~C~C~~G~~G~~C~~ 705 (1945)
.|..++|+++++|.+..++|+|.|++||+|..||.
T Consensus 121 ~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~ 155 (164)
T 3cfw_A 121 SCQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQF 155 (164)
T ss_dssp CCCTTSSCSSEEEEEETTEEEEEECTTCBSSSSCB
T ss_pred CCCCCcCCCCCeecccCCCceeeeCCCcccccccc
Confidence 45567777777888777778888888888877775
No 249
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=91.50 E-value=0.051 Score=58.93 Aligned_cols=43 Identities=33% Similarity=0.868 Sum_probs=33.6
Q ss_pred CCCCCCcCccCCCccCCCCCC---CCCCCeeeccCCCeEEecCCCccc
Q psy6358 292 ATYTGDLCEQDVDECSIRPSV---CHNGATCTNSVGGFSCICVNGWTG 336 (1945)
Q Consensus 292 ~G~~G~~C~~d~deC~~~~~~---C~~~~~C~n~~g~~~C~C~~Gy~G 336 (1945)
+||.+.....|++||...+.. |++ .|+|+.|+|+|.|++||+.
T Consensus 113 ~Gf~~~~~~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l 158 (170)
T 1szb_A 113 TGFEAFYAAEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVL 158 (170)
T ss_dssp CEEEEEEEEEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEE
T ss_pred cCceeeeeccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEE
Confidence 677777666788888765543 876 7999999999999999983
No 250
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=91.32 E-value=0.12 Score=43.63 Aligned_cols=31 Identities=32% Similarity=0.720 Sum_probs=18.5
Q ss_pred CCCCCCCeeccCCCCCCeeeecCCCCccCCCC
Q psy6358 911 NRCQHGARCTPSANFQDFACHCGVGWTGRYCN 942 (1945)
Q Consensus 911 ~~C~~g~~C~~~~~~~~~~C~C~~G~~G~~C~ 942 (1945)
+.|.|| +|.-....+.+.|.|++||+|.+|+
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACVCHSGYVGARCE 44 (50)
T ss_pred CcccCC-EEeeccCCCCeEEECCCCCcccCCC
Confidence 355665 6654434455666677777766665
No 251
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=91.28 E-value=0.12 Score=64.47 Aligned_cols=39 Identities=21% Similarity=0.735 Sum_probs=34.7
Q ss_pred cCCCCCCCCCCCCCeeeecCCceEEeeCC-CccCCCcccC
Q psy6358 433 NIDDCAFKPCRHGGTCIDLVNAYKCVCQV-PYTGHDCHQK 471 (1945)
Q Consensus 433 ~~~~C~~~~C~~~g~C~~~~g~y~C~C~~-G~~G~~C~~~ 471 (1945)
..+.|..+||+|+|+|++.+++|+|.|+. ||+|..|+.+
T Consensus 184 ~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 184 PSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp CSSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred CCCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 34678889999999999999999999996 9999999764
No 252
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=90.96 E-value=0.14 Score=63.75 Aligned_cols=43 Identities=19% Similarity=0.602 Sum_probs=35.8
Q ss_pred CCCccCCcCCCCCCCCCcEEeecCCCeEEecCC-CCCCCCCCCC
Q psy6358 862 QQPINIDDCAFKPCRHGGTCIDLVNAYKCVCQV-PYTGHDCHQK 904 (1945)
Q Consensus 862 ~c~~~ideC~~~pC~~~g~C~~~~~~y~C~C~~-G~~G~~C~~~ 904 (1945)
.|+...++|.++||.|+|+|++..++|+|.|+. ||+|+.|+..
T Consensus 180 gC~~~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 180 GCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp SCCCCSSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred CCCCCCCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 465556889999999999999999999999985 9999988753
No 253
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=90.20 E-value=0.085 Score=44.92 Aligned_cols=28 Identities=18% Similarity=0.464 Sum_probs=25.2
Q ss_pred eeccCCCCeeeeCCCCCc----cCccCCCCcc
Q psy6358 356 TCIDRVGSFYCQCTPGKT----GLLCHLEDAC 383 (1945)
Q Consensus 356 ~C~~~~g~~~C~C~~G~~----G~~C~~~d~C 383 (1945)
.|+++.|+|+|.|++||+ |..|+++|++
T Consensus 11 ~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~ 42 (51)
T 1kig_L 11 FCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42 (51)
T ss_dssp CCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred EeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence 699999999999999996 7889988875
No 254
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=89.71 E-value=0.17 Score=54.60 Aligned_cols=38 Identities=39% Similarity=0.972 Sum_probs=29.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEeeCCCCCceeecCCCCcCCCCCCC
Q psy6358 30 SLCEIPVANSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCELQ 75 (1945)
Q Consensus 30 ~~C~~~~~~~C~~~~C~ngg~C~~~~~~~~~C~C~~G~~G~~C~~~ 75 (1945)
..|..+ .|. .+|+|||.|+ +..+|+|++||+|..|+..
T Consensus 144 K~C~~~---~C~-~~C~ngG~Cv----~P~~C~C~~Gw~G~~C~~~ 181 (188)
T 2ygo_A 144 KTCQQA---ECP-GGCRNGGFCN----ERRICECPDGFHGPHCEGT 181 (188)
T ss_dssp EEECCC---CCT-TCCCTTCEEC----TTSCEECCTTCBTTTTCBC
T ss_pred ccccCC---ccC-CCCCCCCEeC----CCCcccCcCCCCCCCCcCC
Confidence 456653 464 6999999996 3468999999999999864
No 255
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=89.22 E-value=0.51 Score=57.67 Aligned_cols=15 Identities=27% Similarity=0.771 Sum_probs=12.1
Q ss_pred eeecCCCCccCCccc
Q psy6358 1300 YSCECLPGYTGLHCE 1314 (1945)
Q Consensus 1300 ~~C~C~~G~~G~~C~ 1314 (1945)
..|.|..+++|.+|+
T Consensus 286 g~C~C~hnT~G~~CE 300 (403)
T 2y38_A 286 LQCACQHNTCGGSCD 300 (403)
T ss_dssp EEECCCTTEESSSCC
T ss_pred eEeECcCcCcCCCCC
Confidence 458888888888886
No 256
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=89.09 E-value=0.51 Score=57.64 Aligned_cols=15 Identities=27% Similarity=0.935 Sum_probs=12.7
Q ss_pred cEEecCCCcccCccC
Q psy6358 1111 FRCVCMPGFTGTQCE 1125 (1945)
Q Consensus 1111 ~~C~C~~Gy~G~~C~ 1125 (1945)
.+|.|..+++|.+|+
T Consensus 286 g~C~C~hnT~G~~CE 300 (403)
T 2y38_A 286 LQCACQHNTCGGSCD 300 (403)
T ss_dssp EEECCCTTEESSSCC
T ss_pred eEeECcCcCcCCCCC
Confidence 468999999999986
No 257
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=88.12 E-value=0.15 Score=43.80 Aligned_cols=29 Identities=28% Similarity=0.643 Sum_probs=25.7
Q ss_pred CeeccCCC-CeeeeCCCCCc----cCccCCCCcc
Q psy6358 355 ATCIDRVG-SFYCQCTPGKT----GLLCHLEDAC 383 (1945)
Q Consensus 355 ~~C~~~~g-~~~C~C~~G~~----G~~C~~~d~C 383 (1945)
..|+++.+ +|+|.|++||+ |+.|+++|||
T Consensus 11 ~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec 44 (53)
T 2bz6_L 11 QYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY 44 (53)
T ss_dssp SEEEEETTTEEEEECCTTEEECTTSSCEEECSSS
T ss_pred CEeEcCCCCCEEeeCCCCCEECCCCCcccCCccc
Confidence 36999998 79999999997 7899998887
No 258
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=87.56 E-value=0.29 Score=69.64 Aligned_cols=45 Identities=22% Similarity=0.672 Sum_probs=39.4
Q ss_pred ccccCCCCCCCCCCCCCeeeecCCceEEeeC-CCccCCCcccCCCC
Q psy6358 430 CEINIDDCAFKPCRHGGTCIDLVNAYKCVCQ-VPYTGHDCHQKLDP 474 (1945)
Q Consensus 430 C~~~~~~C~~~~C~~~g~C~~~~g~y~C~C~-~G~~G~~C~~~~d~ 474 (1945)
|....+.|..+||+|+|+|++.+.+|+|.|+ +||+|..|+.+..+
T Consensus 1013 C~~~~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~~~~ 1058 (1245)
T 3qcw_A 1013 CEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTT 1058 (1245)
T ss_dssp SSCCCCCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBCCCE
T ss_pred eecccCceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCCCce
Confidence 6556678999999999999999999999999 69999999876543
No 259
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=86.85 E-value=0.34 Score=68.93 Aligned_cols=44 Identities=18% Similarity=0.543 Sum_probs=36.7
Q ss_pred CCCccCCcCCCCCCCCCcEEeecCCCeEEecC-CCCCCCCCCCCC
Q psy6358 862 QQPINIDDCAFKPCRHGGTCIDLVNAYKCVCQ-VPYTGHDCHQKL 905 (1945)
Q Consensus 862 ~c~~~ideC~~~pC~~~g~C~~~~~~y~C~C~-~G~~G~~C~~~~ 905 (1945)
.|....+.|.++||.|+|+|++...+|+|.|+ +||+|..|+.+.
T Consensus 1012 gC~~~~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~~ 1056 (1245)
T 3qcw_A 1012 GCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPG 1056 (1245)
T ss_dssp SSSCCCCCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBCC
T ss_pred eeecccCceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCCC
Confidence 46656688999999999999999999999999 599999987543
No 260
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=86.74 E-value=0.32 Score=52.47 Aligned_cols=32 Identities=47% Similarity=1.246 Sum_probs=26.7
Q ss_pred CcCCCCCCCCCEeeecCCCceEEeCCCCccCCCcccC
Q psy6358 631 DCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELD 667 (1945)
Q Consensus 631 eC~~~pC~n~g~C~~~~~~~y~C~C~~G~~G~~Ce~~ 667 (1945)
.|. .+|+|||.|+.. .+|.|++||+|..|+..
T Consensus 150 ~C~-~~C~ngG~Cv~P----~~C~C~~Gw~G~~C~~~ 181 (188)
T 2ygo_A 150 ECP-GGCRNGGFCNER----RICECPDGFHGPHCEGT 181 (188)
T ss_dssp CCT-TCCCTTCEECTT----SCEECCTTCBTTTTCBC
T ss_pred ccC-CCCCCCCEeCCC----CcccCcCCCCCCCCcCC
Confidence 454 689999999864 38999999999999954
No 261
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=84.85 E-value=0.34 Score=51.65 Aligned_cols=42 Identities=33% Similarity=0.793 Sum_probs=33.1
Q ss_pred CCCccCCCCccCcccCCC--CCCCCCCeeeeCCCCeEeeCCCCccc
Q psy6358 934 VGWTGRYCNEDVDECQLS--SPCRNGATCHNTNGSYLCECAKGYEG 977 (1945)
Q Consensus 934 ~G~~G~~C~~dideC~~~--~~C~~~~~C~n~~gsy~C~C~~Gy~G 977 (1945)
.||...+...++|||... .+|. ..|.|+.++|+|.|++||+.
T Consensus 106 ~GF~~~y~~~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l 149 (159)
T 1nzi_A 106 TGFAAYYVATDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFL 149 (159)
T ss_dssp CEEEEEEEEEECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEE
T ss_pred ccceeeeecccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcEE
Confidence 577766666789999753 3575 47999999999999999983
No 262
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=75.10 E-value=1.5 Score=38.46 Aligned_cols=24 Identities=29% Similarity=0.786 Sum_probs=15.9
Q ss_pred CCCCCCCCeeeccC-CCeEEecCCCcc
Q psy6358 310 PSVCHNGATCTNSV-GGFSCICVNGWT 335 (1945)
Q Consensus 310 ~~~C~~~~~C~n~~-g~~~C~C~~Gy~ 335 (1945)
...|+. .|+|++ |+|+|.|++||.
T Consensus 6 nggC~~--~C~n~~~gs~~C~C~~Gy~ 30 (59)
T 2wph_E 6 NGRCEQ--FCKNSADNKVVCSCTEGYR 30 (59)
T ss_dssp GGGCSS--EEEECSTTCEEEECCTTEE
T ss_pred CCCcCC--EeEeCCCCCEEeeCCCCcE
Confidence 344543 577777 477777777775
No 263
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=74.74 E-value=0.94 Score=48.14 Aligned_cols=43 Identities=23% Similarity=0.575 Sum_probs=28.6
Q ss_pred CCCCCCcCccCCCccCCC-CCCCCCCCeeeccCCCeEEecCCCccc
Q psy6358 292 ATYTGDLCEQDVDECSIR-PSVCHNGATCTNSVGGFSCICVNGWTG 336 (1945)
Q Consensus 292 ~G~~G~~C~~d~deC~~~-~~~C~~~~~C~n~~g~~~C~C~~Gy~G 336 (1945)
.||.......|+|||... ...|. ..|.|..|+|+|.|.+||+.
T Consensus 106 ~GF~~~y~~~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l 149 (159)
T 1nzi_A 106 TGFAAYYVATDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFL 149 (159)
T ss_dssp CEEEEEEEEEECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEE
T ss_pred ccceeeeecccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcEE
Confidence 455555444577888653 23565 37888888888888888873
No 264
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=72.24 E-value=1.6 Score=38.20 Aligned_cols=27 Identities=22% Similarity=0.490 Sum_probs=22.6
Q ss_pred CeeccCC-CCeeeeCCCCCc----cCccCCCC
Q psy6358 355 ATCIDRV-GSFYCQCTPGKT----GLLCHLED 381 (1945)
Q Consensus 355 ~~C~~~~-g~~~C~C~~G~~----G~~C~~~d 381 (1945)
..|+++. |+|.|.|++||. |..|.+++
T Consensus 11 ~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~ 42 (59)
T 2wph_E 11 QFCKNSADNKVVCSCTEGYRLAENQKSCEPAV 42 (59)
T ss_dssp SEEEECSTTCEEEECCTTEEECTTSSCEEESS
T ss_pred CEeEeCCCCCEEeeCCCCcEECCCCCcccCCC
Confidence 3699998 699999999996 67888764
No 265
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=70.52 E-value=2.4 Score=49.31 Aligned_cols=53 Identities=28% Similarity=0.721 Sum_probs=36.9
Q ss_pred CCCCCeeeeCCCCeEeeCCCCcccCCcccCCC---------CCCCC----CCCCCCEEecCCCCeEEecCCCCC
Q psy6358 954 CRNGATCHNTNGSYLCECAKGYEGRDCLINTD---------DCASF----PCQNGGTCLDEVGDYSCLCVDGFS 1014 (1945)
Q Consensus 954 C~~~~~C~n~~gsy~C~C~~Gy~G~~C~~~~d---------~C~~~----~C~n~g~C~~~~g~y~C~C~~Gy~ 1014 (1945)
|..+|+|.-. .|.|.+||+|..|+-..+ .|... .|+..|+|+-+ +|.|.++|.
T Consensus 198 C~g~G~~~CG----~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG----~C~C~~~~~ 263 (280)
T 2p26_A 198 CHGKGFLECG----ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDV 263 (280)
T ss_dssp GGGSEEEETT----EEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT----EEEECCCSS
T ss_pred cCCCCeECCC----ceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCC----eeECcCCCC
Confidence 5545555532 589999999998863322 57532 59988999865 799988764
No 266
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=68.99 E-value=1.9 Score=50.23 Aligned_cols=48 Identities=31% Similarity=0.755 Sum_probs=26.8
Q ss_pred ecCCCCCccCCCCCCCCC--------CCCC----CCCCCCCEEeeCCCCCceeecCCCC------cCCCCC
Q psy6358 21 CSCPIGFSASLCEIPVAN--------SCDS----FPCMNGGTCTLKSLDRYTCTCAPGF------TGSQCE 73 (1945)
Q Consensus 21 C~C~~g~~g~~C~~~~~~--------~C~~----~~C~ngg~C~~~~~~~~~C~C~~G~------~G~~C~ 73 (1945)
|.|.+||+|..|+.+... .|.. ..|...|+|.- .+|.|.++| +|.+|+
T Consensus 209 C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~C-----G~C~C~~~~~~~~~~~G~~~~ 274 (280)
T 2p26_A 209 CRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-----GQCLCHTSDVPGKLIYGQYCE 274 (280)
T ss_dssp EEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEET-----TEEEECCCSSTTCEEESTTSC
T ss_pred eeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeC-----CeeECcCCCCCCeeEeeEecc
Confidence 667777777777643221 4531 24666667653 257776654 455555
No 267
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=57.25 E-value=1.8 Score=56.15 Aligned_cols=46 Identities=20% Similarity=0.437 Sum_probs=38.8
Q ss_pred eecCCCCcCCCCCCCCCCCCCCCCCCCeeccCCCCceeecCCCccCCcccc
Q psy6358 61 CTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSE 111 (1945)
Q Consensus 61 C~C~~G~~G~~C~~~~~C~~~~C~n~g~C~~~~~~~~C~C~~Gf~G~~C~~ 111 (1945)
-.|.+||.|++|.....|.. .|..+|.|++. .|.|.+||+|..|++
T Consensus 520 ~~C~~gw~g~dc~i~~~Cp~-~C~ghG~C~~G----~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 520 FDKQQTWAIDNVYIGDGCLD-MCSGHGRCVQG----SCVCDEQWGGLYCDE 565 (725)
T ss_dssp CCTTCCEEEEEEEEESCSSG-GGGGSEEEETT----EEEECTTEESTTSCE
T ss_pred CccCCCcccccccccCCCCc-ccCCCcEECCC----CEeeCCCccCCCcCc
Confidence 47899999999986677864 79999999864 699999999999964
No 268
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=56.94 E-value=3.7 Score=47.99 Aligned_cols=33 Identities=21% Similarity=0.651 Sum_probs=22.9
Q ss_pred CCCccCCC-CCCCCCCCeeeccCCCeEEecCCCccc
Q psy6358 302 DVDECSIR-PSVCHNGATCTNSVGGFSCICVNGWTG 336 (1945)
Q Consensus 302 d~deC~~~-~~~C~~~~~C~n~~g~~~C~C~~Gy~G 336 (1945)
++|||... +..|.+ .|+|+.++|+|.|..||..
T Consensus 1 ~~~eC~~~~~~~C~~--~C~~~~~~~~C~C~~G~~l 34 (283)
T 3f1s_B 1 AKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRL 34 (283)
T ss_dssp --CCCCSSCSSSCSS--BCCCCTTSCCCBCCTTEEE
T ss_pred CCCccCCCCCCCCCC--EeeCCCCCeEecCCCCccc
Confidence 35778766 567765 6888888888888888853
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=56.82 E-value=3.3 Score=50.00 Aligned_cols=30 Identities=43% Similarity=1.042 Sum_probs=12.8
Q ss_pred CCccCCCCCCCCCCCeeeccCCCeEEecCCCcc
Q psy6358 303 VDECSIRPSVCHNGATCTNSVGGFSCICVNGWT 335 (1945)
Q Consensus 303 ~deC~~~~~~C~~~~~C~n~~g~~~C~C~~Gy~ 335 (1945)
||||+ .+..|++ .|+|+.|+|+|.|++||.
T Consensus 1 i~ec~-~~~~C~~--~C~n~~g~~~C~C~~g~~ 30 (349)
T 3v64_C 1 VNECA-EEGYCSQ--GCTNSEGAFQCWCEAGYE 30 (349)
T ss_dssp ---------CCSS--EECCC---CCEECCTTEE
T ss_pred CcccC-CCCCCcC--eeecCCCCeEEECCCCcc
Confidence 45665 4455654 677777777777777775
No 270
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=52.56 E-value=4.4 Score=48.92 Aligned_cols=30 Identities=40% Similarity=1.010 Sum_probs=14.8
Q ss_pred CcccCCCCCCCCCCeeeeCCCCeEeeCCCCcc
Q psy6358 945 VDECQLSSPCRNGATCHNTNGSYLCECAKGYE 976 (1945)
Q Consensus 945 ideC~~~~~C~~~~~C~n~~gsy~C~C~~Gy~ 976 (1945)
||||+....|.+ .|+|+.|+|+|.|++||.
T Consensus 1 i~ec~~~~~C~~--~C~n~~g~~~C~C~~g~~ 30 (349)
T 3v64_C 1 VNECAEEGYCSQ--GCTNSEGAFQCWCEAGYE 30 (349)
T ss_dssp --------CCSS--EECCC---CCEECCTTEE
T ss_pred CcccCCCCCCcC--eeecCCCCeEEECCCCcc
Confidence 467764456764 688888888888888886
No 271
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=50.95 E-value=4.5 Score=52.47 Aligned_cols=45 Identities=24% Similarity=0.697 Sum_probs=29.2
Q ss_pred eCCCCcccCCcccCCCCCCCCCCCCCCEEecCCCCeEEecCCCCCCCCCCc
Q psy6358 970 ECAKGYEGRDCLINTDDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEV 1020 (1945)
Q Consensus 970 ~C~~Gy~G~~C~~~~d~C~~~~C~n~g~C~~~~g~y~C~C~~Gy~G~~C~~ 1020 (1945)
.|.+||+|.+|.+. ..|.. .|..+|.|+++ .|+|.+||+|..|..
T Consensus 521 ~C~~gw~g~dc~i~-~~Cp~-~C~ghG~C~~G----~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 521 DKQQTWAIDNVYIG-DGCLD-MCSGHGRCVQG----SCVCDEQWGGLYCDE 565 (725)
T ss_dssp CTTCCEEEEEEEEE-SCSSG-GGGGSEEEETT----EEEECTTEESTTSCE
T ss_pred ccCCCccccccccc-CCCCc-ccCCCcEECCC----CEeeCCCccCCCcCc
Confidence 56777777777521 34443 57777777765 577777777777754
No 272
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=44.50 E-value=22 Score=48.66 Aligned_cols=47 Identities=23% Similarity=0.431 Sum_probs=36.9
Q ss_pred CCcCCCCCCCCCEeeecCCCceEEeCCCCccCCCcccCCCCcccCCCCCCC
Q psy6358 630 YDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHA 680 (1945)
Q Consensus 630 ~eC~~~pC~n~g~C~~~~~~~y~C~C~~G~~G~~Ce~~~~~~C~~~pC~~~ 680 (1945)
+.|.-+||+|+|++.... +...|.|++||.|..||.. + +...++...
T Consensus 498 ~~c~C~PC~ngg~~~l~g-~~C~C~C~~g~~G~~Ce~~-~--~~~~~~~v~ 544 (913)
T 3t5o_A 498 DPCQCAPCPNNGRPTLSG-TECLCVCQSGTYGENCEKQ-S--PDYKSNAVD 544 (913)
T ss_dssp CGGGSCCBTTTBEEEEET-TEEEEECCTTBCSTTSCCB-C--SSCCCCCBC
T ss_pred ccccCCCCCCCCEeecCC-CceEEEccCCccccCccCc-c--ccccccccC
Confidence 445556999999999765 7899999999999999965 3 666666444
No 273
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=43.24 E-value=17 Score=49.68 Aligned_cols=45 Identities=24% Similarity=0.449 Sum_probs=36.9
Q ss_pred CCcCCCCCCCCCcEEeecCCCeEEecCCCCCCCCCCCCCCCCCCCCC
Q psy6358 867 IDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRC 913 (1945)
Q Consensus 867 ideC~~~pC~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~C~~~~C 913 (1945)
.+.|.-+||+|+++++...+.+.|+|++||.|..|+... +...++
T Consensus 497 ~~~c~C~PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~~~--~~~~~~ 541 (913)
T 3t5o_A 497 FDPCQCAPCPNNGRPTLSGTECLCVCQSGTYGENCEKQS--PDYKSN 541 (913)
T ss_dssp TCGGGSCCBTTTBEEEEETTEEEEECCTTBCSTTSCCBC--SSCCCC
T ss_pred cccccCCCCCCCCEeecCCCceEEEccCCccccCccCcc--cccccc
Confidence 455766799999999998889999999999999998765 544444
No 274
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=41.61 E-value=11 Score=43.93 Aligned_cols=39 Identities=26% Similarity=0.687 Sum_probs=27.9
Q ss_pred CCCCCCC---CCCCCCeeccCCCCeeeeCCCCCc----cCccCCCCcc
Q psy6358 343 IDDCAGA---ACFNGATCIDRVGSFYCQCTPGKT----GLLCHLEDAC 383 (1945)
Q Consensus 343 id~C~~~---~C~~~~~C~~~~g~~~C~C~~G~~----G~~C~~~d~C 383 (1945)
+|||... .|. ..|.++.++|+|.|++||. +..|...++|
T Consensus 2 ~~eC~~~~~~~C~--~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c 47 (283)
T 3f1s_B 2 KNECHPERTDGCQ--HFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQC 47 (283)
T ss_dssp -CCCCSSCSSSCS--SBCCCCTTSCCCBCCTTEEECTTSSCEEECSTT
T ss_pred CCccCCCCCCCCC--CEeeCCCCCeEecCCCCcccCCCCCcccccccc
Confidence 5677643 564 4699999999999999996 4566655443
No 275
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=41.39 E-value=43 Score=31.71 Aligned_cols=67 Identities=15% Similarity=0.302 Sum_probs=50.4
Q ss_pred cCCCCCCCCCEeeecCCCceEEeCCCCcc--CCCcccCCCCcccCC--CCCCCCeeeeCC-CCeeeeccCCc
Q psy6358 632 CDSNPCQNGGFCRSKEGGGYRCDCPPGAT--GTHCELDSRNECYSN--PCQHAGTCEDRI-ADYACYCLPMW 698 (1945)
Q Consensus 632 C~~~pC~n~g~C~~~~~~~y~C~C~~G~~--G~~Ce~~~~~~C~~~--pC~~~~~C~~~~-~~y~C~C~~G~ 698 (1945)
|...-|.-++.|....++.-+|+|.+||. |..|..+....|..+ -|...|+|.... ..-.|.|...+
T Consensus 7 C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~ 78 (95)
T 1b9w_A 7 CIDTNVPENAACYRYLDGTEEWRCLLYFKEDAGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEG 78 (95)
T ss_dssp CSSCCCCTTEEEEECTTSCEEEEECTTEEEETTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred cccCCCCCCcCeEEEcCCCEEEEEECCeEecCCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCC
Confidence 44446667788988765788999999995 667876544467754 488889998777 67889998774
No 276
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=41.28 E-value=35 Score=32.28 Aligned_cols=67 Identities=18% Similarity=0.384 Sum_probs=45.4
Q ss_pred CCCCCCCCCCeecCCC-CceeeecCCCCC--CCcCccC-CCccCCCCCCCCCCCeeeccC-CCeEEecCCCc
Q psy6358 268 CPGNLCQNGATCMDGI-NKYSCLCLATYT--GDLCEQD-VDECSIRPSVCHNGATCTNSV-GGFSCICVNGW 334 (1945)
Q Consensus 268 C~~~~C~~~~~C~~~~-~~y~C~C~~G~~--G~~C~~d-~deC~~~~~~C~~~~~C~n~~-g~~~C~C~~Gy 334 (1945)
|....|..++.|.... +.-.|.|..+|. |..|..+ ...|+.+...|...|.|.... ..-.|+|...|
T Consensus 7 C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~ 78 (95)
T 1b9w_A 7 CIDTNVPENAACYRYLDGTEEWRCLLYFKEDAGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEG 78 (95)
T ss_dssp CSSCCCCTTEEEEECTTSCEEEEECTTEEEETTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred cccCCCCCCcCeEEEcCCCEEEEEECCeEecCCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCC
Confidence 3334566667777643 567788888885 5566543 235777777788888888766 56778888764
No 277
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=30.59 E-value=32 Score=43.17 Aligned_cols=40 Identities=25% Similarity=0.584 Sum_probs=0.0
Q ss_pred CCCC---CCCCCCCCCeeeec-CCceEEeeCCCccCC--CcccCCC
Q psy6358 434 IDDC---AFKPCRHGGTCIDL-VNAYKCVCQVPYTGH--DCHQKLD 473 (1945)
Q Consensus 434 ~~~C---~~~~C~~~g~C~~~-~g~y~C~C~~G~~G~--~C~~~~d 473 (1945)
++.| ..+||..++.|+.+ .++|.|.|+.||.|. .|..|.|
T Consensus 18 ~~~c~~~~~~~c~~~a~C~~~~~~~~~c~C~~G~ag~G~~c~~D~D 63 (551)
T 3fby_A 18 QRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGNGILCGRDTD 63 (551)
T ss_dssp CCBCTTSSBCCCCTTEEEEECTTSCEEEEECTTEESSSSSCEECTT
T ss_pred cccCCCCCCCCCCCCCeeEeCCCCCEecCCCCCCCCCCcccCccCC
No 278
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=23.33 E-value=1e+02 Score=25.15 Aligned_cols=23 Identities=17% Similarity=0.145 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHhHhhhhccc
Q psy6358 1749 MGVFLMMLVGLLLGVLVTTQRKR 1771 (1945)
Q Consensus 1749 ~~~~~~~l~~~~lg~~~~~~rkr 1771 (1945)
++.++++++++.+..++..+|++
T Consensus 17 ~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 17 AVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhheehhh
Confidence 33333344444444444444444
No 279
>2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens}
Probab=23.30 E-value=45 Score=33.76 Aligned_cols=41 Identities=5% Similarity=-0.123 Sum_probs=22.3
Q ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhCCC
Q psy6358 1874 SYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIP 1919 (1945)
Q Consensus 1874 ~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga 1919 (1945)
..+.|+.|++.|...+.. ..||..+ ...-...+++|+++..
T Consensus 78 ~e~~v~~L~~MGF~~~~a----~~AL~~~-~~~~e~A~e~L~~~~~ 118 (126)
T 2lbc_A 78 PEEIVAIITSMGFQRNQA----IQALRAT-NNNLERALDWIFSHPE 118 (126)
T ss_dssp CHHHHHHHHHHTSCHHHH----HHHHHHH-TSCHHHHHHHHHTCCS
T ss_pred CHHHHHHHHHcCCCHHHH----HHHHHHc-CCCHHHHHHHHHhCCC
Confidence 456677777777653322 1234332 2233446788888765
Done!