RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy6358
(1945 letters)
>2vj3_A Neurogenic locus notch homolog protein 1; transcription,
metal-binding, transmembrane, developmental protein,
notch signaling pathway; 2.60A {Homo sapiens} SCOP:
g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A
2rr2_A*
Length = 135
Score = 172 bits (438), Expect = 7e-50
Identities = 53/126 (42%), Positives = 78/126 (61%), Gaps = 2/126 (1%)
Query: 1089 NVNECE--SHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLI 1146
+V+EC ++PC++ G C++ G+F C C+ G+TG +CE D++EC SNPC N C D I
Sbjct: 4 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQI 63
Query: 1147 NTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNIND 1206
F+C C G+ G HC++N D+C SSPC + G C D I + CEC GFTG C+ +++
Sbjct: 64 GEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHH 123
Query: 1207 CASNPC 1212
Sbjct: 124 ILDAQK 129
Score = 171 bits (435), Expect = 2e-49
Identities = 67/121 (55%), Positives = 85/121 (70%)
Query: 1058 SPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMP 1117
+PCEH G C+NT GSF C C QG+TGPRCE +VNEC S+PCQND +CLD G F+C+CMP
Sbjct: 13 NPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMP 72
Query: 1118 GFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNG 1177
G+ G CE + DECAS+PCL+ G C D IN F+C CP GFTG CQ+++ + +
Sbjct: 73 GYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHHILDAQKMVW 132
Query: 1178 G 1178
Sbjct: 133 N 133
Score = 171 bits (435), Expect = 2e-49
Identities = 52/134 (38%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Query: 1274 NCEININEC--YSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVC 1331
+ + +++EC +NPC + KC++ + + C+CL GYTG CE ++NEC SNPC N C
Sbjct: 1 SAQ-DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATC 59
Query: 1332 VDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEF 1391
+D I F+C C GY C + DECAS PCL+ G C D +N+F C C G+ G C+
Sbjct: 60 LDQIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQV 119
Query: 1392 DIDECGSNPCQHGG 1405
D+
Sbjct: 120 DLHHILDAQKMVWN 133
Score = 166 bits (423), Expect = 8e-48
Identities = 55/129 (42%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
Query: 1241 LDECA--SNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGIN 1298
+DEC+ +NPC+ G+C + + ++C+C G +G CEI++NEC SNPC+N A C+D I
Sbjct: 5 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIG 64
Query: 1299 RYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDEC 1358
+ C C+PGY G+HCE N +ECAS+PC + G C+D I+ F+CECP G+ C D+
Sbjct: 65 EFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHHI 124
Query: 1359 ASDPCLNGG 1367
+
Sbjct: 125 LDAQKMVWN 133
Score = 165 bits (420), Expect = 2e-47
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Query: 1203 NINDCA--SNPC-HRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLI 1259
++++C+ +NPC H G+CI+ SF C C G+TG C ++EC SNPCQ C D I
Sbjct: 4 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQI 63
Query: 1260 NGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINE 1319
+QC C PG G +CE+N +EC S+PC + +C+D IN + CEC G+TG C+ +++
Sbjct: 64 GEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHH 123
Query: 1320 CASNPCANGG 1329
Sbjct: 124 ILDAQKMVWN 133
Score = 165 bits (419), Expect = 2e-47
Identities = 52/130 (40%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Query: 1316 NINECA--SNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGL 1373
+++EC+ +NPC + G C++ + F+C+C +GY RC DV+EC S+PC N TC D +
Sbjct: 4 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQI 63
Query: 1374 NQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDD 1433
+F C C PGY G CE + DEC S+PC H G C D +N + CEC G+TG C++++
Sbjct: 64 GEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHH 123
Query: 1434 CAFKPCRHGG 1443
Sbjct: 124 ILDAQKMVWN 133
Score = 162 bits (413), Expect = 2e-46
Identities = 53/126 (42%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 1127 DIDECA--SNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSI 1184
D+DEC+ +NPC + G C + + +F+C C G+TG C+I++++CVS+PC N C D I
Sbjct: 4 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQI 63
Query: 1185 AGYTCECLAGFTGMSCETNINDCASNPC-HRGECIDGENSFTCACHPGFTGALCNTQLDE 1243
+ C C+ G+ G+ CE N ++CAS+PC H G C+D N F C C GFTG LC L
Sbjct: 64 GEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHH 123
Query: 1244 CASNPC 1249
Sbjct: 124 ILDAQK 129
Score = 158 bits (402), Expect = 6e-45
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 30/159 (18%)
Query: 982 INTDDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQM 1041
++ + PC++ G C++ +G + C C+ G++G CE+D++EC SNPC N
Sbjct: 5 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQND-------- 56
Query: 1042 IFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQND 1101
TC++ G F C C G+ G CE N +EC S PC ++
Sbjct: 57 ----------------------ATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCLHN 94
Query: 1102 GSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGG 1140
G CLD F+C C GFTG C+ D+ +
Sbjct: 95 GRCLDKINEFQCECPTGFTGHLCQVDLHHILDAQKMVWN 133
Score = 154 bits (391), Expect = 2e-43
Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 31/161 (19%)
Query: 943 EDVDECQL-SSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDE 1001
+DVDEC L ++PC + C NT GS+ C+C +GY G C I+ ++C S PCQN TCLD+
Sbjct: 3 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQ 62
Query: 1002 VGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCE 1061
+G++ C+C+ G+ G HCEV+ DEC+S+PC +
Sbjct: 63 IGEFQCICMPGYEGVHCEVNTDECASSPCLHN---------------------------- 94
Query: 1062 HDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDG 1102
G C++ F C C GFTG C+ +++
Sbjct: 95 --GRCLDKINEFQCECPTGFTGHLCQVDLHHILDAQKMVWN 133
Score = 145 bits (369), Expect = 1e-40
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 5/134 (3%)
Query: 185 NVNECE--SHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRE 242
+V+EC ++PC++ G C++ G+F C C GYTG CE C +PCQN C +
Sbjct: 4 DVDECSLGANPCEHAGKCINTLGSFECQC--LQGYTGPRCEIDVNECVSNPCQNDATCLD 61
Query: 243 LDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQD 302
++C C GY G +CE N D+C + C + C+D IN++ C C +TG LC+ D
Sbjct: 62 QIG-EFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVD 120
Query: 303 VDECSIRPSVCHNG 316
+ + N
Sbjct: 121 LHHILDAQKMVWNH 134
Score = 142 bits (361), Expect = 2e-39
Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 1354 DVDECA--SDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHL 1411
DVDEC+ ++PC + G C + L F C C GY G RCE D++EC SNPCQ+ C D +
Sbjct: 4 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQI 63
Query: 1412 NGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCA 1457
+ C C GY G++CE+N D+CA PC H G C+D +N ++C C
Sbjct: 64 GEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECP 109
Score = 142 bits (361), Expect = 2e-39
Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 43/170 (25%)
Query: 866 NIDDCAF--KPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSA 923
++D+C+ PC H G CI+ + +++C C
Sbjct: 4 DVDECSLGANPCEHAGKCINTLGSFECQCL------------------------------ 33
Query: 924 NFQDFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLIN 983
G+TG C DV+EC +S+PC+N ATC + G + C C GYEG C +N
Sbjct: 34 ----------QGYTGPRCEIDVNEC-VSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN 82
Query: 984 TDDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNG 1033
TD+CAS PC + G CLD++ ++ C C GF+G C+VD+
Sbjct: 83 TDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHHILDAQKMVW 132
Score = 142 bits (360), Expect = 2e-39
Identities = 59/125 (47%), Positives = 78/125 (62%), Gaps = 5/125 (4%)
Query: 154 SPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMC 213
+PCEH G C+NT GSF C C QG+TGPRCE +VNEC S+PCQND +CLD G F+C+CM
Sbjct: 13 NPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICM- 71
Query: 214 EPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGN-- 271
PGY G +CE C SPC + G C + N ++CEC +G+ G C+ ++
Sbjct: 72 -PGYEGVHCEVNTDECASSPCLHNGRCLDKIN-EFQCECPTGFTGHLCQVDLHHILDAQK 129
Query: 272 LCQNG 276
+ N
Sbjct: 130 MVWNH 134
Score = 139 bits (353), Expect = 2e-38
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 229 CDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSC 288
+PC++ G C ++EC+C GY G CE ++++C N CQN ATC+D I ++ C
Sbjct: 10 LGANPCEHAGKCINTLG-SFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQC 68
Query: 289 LCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAG 348
+C+ Y G CE + DEC+ P C + C + + F C C G+TG C +++
Sbjct: 69 ICMPGYEGVHCEVNTDECASSP--CLHNGRCLDKINEFQCECPTGFTGHLCQVDLHHILD 126
Query: 349 AACFNG 354
A
Sbjct: 127 AQKMVW 132
Score = 136 bits (346), Expect = 2e-37
Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 5/129 (3%)
Query: 263 ENIDDC--PGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCT 320
+++D+C N C++ C++ + + C CL YTG CE DV+EC P C N ATC
Sbjct: 3 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNP--CQNDATCL 60
Query: 321 NSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLE 380
+ +G F CIC+ G+ G C +N D+CA + C + C+D++ F C+C G TG LC ++
Sbjct: 61 DQIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVD 120
Query: 381 -DACTSNPC 388
Sbjct: 121 LHHILDAQK 129
Score = 131 bits (333), Expect = 1e-35
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 301 QDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDR 360
QDVDECS+ + C + C N++G F C C+ G+TGP C +++++C C N ATC+D+
Sbjct: 3 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQ 62
Query: 361 VGSFYCQCTPGKTGLLCHLE-DACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSE 419
+G F C C PG G+ C + D C S+PC + C + C C +G+ G C
Sbjct: 63 IGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKI---NEFQCECPTGFTGHLCQV 119
Query: 420 DINECE 425
D++
Sbjct: 120 DLHHIL 125
Score = 123 bits (312), Expect = 7e-33
Identities = 44/169 (26%), Positives = 67/169 (39%), Gaps = 39/169 (23%)
Query: 72 CELQDHCA--SSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGECFNT 129
+ D C+ ++PC + C + ++EC C G+ G C D+ EC
Sbjct: 2 AQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNEC------------- 48
Query: 130 HGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNEC 189
+PC++D TC++ G F C C G+ G CE N +EC
Sbjct: 49 ----------------------VSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDEC 86
Query: 190 ESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGG 238
S PC ++G CLD F+C C G+TG C+ +
Sbjct: 87 ASSPCLHNGRCLDKINEFQCECP--TGFTGHLCQVDLHHILDAQKMVWN 133
Score = 123 bits (310), Expect = 1e-32
Identities = 41/161 (25%), Positives = 61/161 (37%), Gaps = 37/161 (22%)
Query: 39 SCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCELQ-DHCASSPCRNGAVCTSLEDTYE 97
S + PC + G C L + C C G+TG +CE+ + C S+PC+N A C ++
Sbjct: 9 SLGANPCEHAGKCINT-LGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQ 67
Query: 98 CDCAPGFVGQTCSEDIIECVDDPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCE 157
C C PG+ G C + EC PC+H
Sbjct: 68 CICMPGYEGVHCEVNTDECASSPCLHN--------------------------------- 94
Query: 158 HDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDG 198
G C++ F C C GFTG C+ +++
Sbjct: 95 --GRCLDKINEFQCECPTGFTGHLCQVDLHHILDAQKMVWN 133
Score = 110 bits (278), Expect = 3e-28
Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYT 60
C++ G C SF C C G++ CEI V N C S PC N TC + + +
Sbjct: 15 CEHAGKCINTLG-----SFECQCLQGYTGPRCEIDV-NECVSNPCQNDATCLDQ-IGEFQ 67
Query: 61 CTCAPGFTGSQCELQ-DHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDD 119
C C PG+ G CE+ D CASSPC + C + ++C+C GF G C D+ +D
Sbjct: 68 CICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHHILDA 127
Query: 120 PCVHGEC 126
+
Sbjct: 128 QKMVWNH 134
Score = 106 bits (267), Expect = 8e-27
Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 601 NGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGAT 660
+ G C G C C Y+G CE +C SNPCQN C + G ++C C PG
Sbjct: 17 HAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGE-FQCICMPGYE 75
Query: 661 GTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCD 704
G HCE+++ +EC S+PC H G C D+I ++ C C + G C
Sbjct: 76 GVHCEVNT-DECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ 118
Score = 96.1 bits (240), Expect = 3e-23
Identities = 42/164 (25%), Positives = 62/164 (37%), Gaps = 36/164 (21%)
Query: 520 DINEC--LSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAP 577
D++EC +NPC G C+ + ++ C C GY G CE+ V ++P
Sbjct: 4 DVDECSLGANPCEHAGK--CINTLGSFECQCLQGYTGPRCEID-----VNECVSNPCQ-- 54
Query: 578 LTVLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPC 637
N C G CIC Y G +CE +C S+PC
Sbjct: 55 -----------------------NDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPC 91
Query: 638 QNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAG 681
+ G C K ++C+CP G TG C++D +
Sbjct: 92 LHNGRCLDK-INEFQCECPTGFTGHLCQVDL-HHILDAQKMVWN 133
Score = 93.0 bits (232), Expect = 4e-22
Identities = 41/180 (22%), Positives = 64/180 (35%), Gaps = 67/180 (37%)
Query: 380 EDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAF 439
E + +NPC C GS+ C C GY G CEI++++C
Sbjct: 7 ECSLGANPCEHAGKCINTL---GSFECQCLQGY-------------TGPRCEIDVNECVS 50
Query: 440 KPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVRCLTPGMIVIRSWILVY 499
PC++ TC+D + ++C+C Y G
Sbjct: 51 NPCQNDATCLDQIGEFQCICMPGYEG---------------------------------- 76
Query: 500 RTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEV 559
CE + +EC S+PC +G C+ +N + C C G+ G C+V
Sbjct: 77 ---------------VHCEVNTDECASSPCLHNGR--CLDKINEFQCECPTGFTGHLCQV 119
Score = 91.5 bits (228), Expect = 1e-21
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 865 INIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSAN 924
I++++C PC++ TC+D + ++C+C Y G C D C + C H RC N
Sbjct: 43 IDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKIN 102
Query: 925 FQDFACHCGVGWTGRYCNEDVDECQLSSPCRNG 957
+F C C G+TG C D+ +
Sbjct: 103 --EFQCECPTGFTGHLCQVDLHHIL-DAQKMVW 132
Score = 82.3 bits (204), Expect = 2e-18
Identities = 47/224 (20%), Positives = 68/224 (30%), Gaps = 92/224 (41%)
Query: 418 SEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVP 477
++D++EC PC H G CI+ + +++C C YTG
Sbjct: 2 AQDVDECS-----------LGANPCEHAGKCINTLGSFECQCLQGYTG------------ 38
Query: 478 NSACVRCLTPGMIVIRSWILVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDC 537
RCE D+NEC+SNPC + T C
Sbjct: 39 -------------------------------------PRCEIDVNECVSNPCQNDAT--C 59
Query: 538 VQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAPLTVLWIAYNWSTTTTATAAL 597
+ + + C C PGY G HCE V +SP L
Sbjct: 60 LDQIGEFQCICMPGYEGVHCE-----VNTDECASSPCL---------------------- 92
Query: 598 ATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGG 641
+ G C C CP ++G C+ +
Sbjct: 93 ---HNGRCLDKINEFQCECPTGFTGHLCQVDLHHILDAQKMVWN 133
Score = 80.3 bits (199), Expect = 1e-17
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 631 DCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADY 690
+NPC++ G C + G + C C G TG CE+D NEC SNPCQ+ TC D+I ++
Sbjct: 9 SLGANPCEHAGKCIN-TLGSFECQCLQGYTGPRCEIDV-NECVSNPCQNDATCLDQIGEF 66
Query: 691 ACYCLPMWNGKNCD 704
C C+P + G +C+
Sbjct: 67 QCICMPGYEGVHCE 80
Score = 70.7 bits (174), Expect = 2e-14
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 13/76 (17%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
Q+ C D + + C C GY G + CE+N +C C +NG C+DK
Sbjct: 54 QNDATCLDQIGEFQCICMPGYEGVH-------------CEVNTDECASSPCLHNGRCLDK 100
Query: 1677 VGGFECRCPPGFVGSR 1692
+ F+C CP GF G
Sbjct: 101 INEFQCECPTGFTGHL 116
Score = 70.3 bits (173), Expect = 4e-14
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
+H G C + L + C+C GYTG CEI+V +C+ C N+ TC+D+
Sbjct: 16 EHAGKCINTLGSFECQCLQGYTGPR-------------CEIDVNECVSNPCQNDATCLDQ 62
Query: 1677 VGGFECRCPPGFVGSR 1692
+G F+C C PG+ G
Sbjct: 63 IGEFQCICMPGYEGVH 78
Score = 64.5 bits (158), Expect = 4e-12
Identities = 35/139 (25%), Positives = 50/139 (35%), Gaps = 58/139 (41%)
Query: 1392 DIDEC--GSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLV 1449
D+DEC G+NPC+H G C + L + C+C GYTG CEI++++C PC++ T
Sbjct: 4 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDAT----- 58
Query: 1450 NAYKCVCAKAGNHRCDDECNTIACHFDGNDCSLGINPWINCTANINCWEVFMNGRCDEVC 1509
C D+ C C G
Sbjct: 59 --------------CLDQIGEFQC-----ICMPG-------------------------- 73
Query: 1510 NNPQCLFDGRDCEKNLQPC 1528
++G CE N C
Sbjct: 74 ------YEGVHCEVNTDEC 86
Score = 43.4 bits (103), Expect = 9e-05
Identities = 24/130 (18%), Positives = 37/130 (28%), Gaps = 57/130 (43%)
Query: 791 NGRCDEVCNNPQCL----FDGRDCEKNLQPCNPIYDGRLLFSQLNFARDHDPGVWLMYFL 846
+ C + QC+ ++G CE N
Sbjct: 56 DATCLDQIGEFQCICMPGYEGVHCEVN--------------------------------- 82
Query: 847 YSAITIRRKLKPLQQQQPINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLD 906
D+CA PC H G C+D +N ++C C +TGH C L
Sbjct: 83 --------------------TDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLH 122
Query: 907 PCVPNRCQHG 916
+ +
Sbjct: 123 HILDAQKMVW 132
Score = 42.6 bits (101), Expect = 2e-04
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 671 ECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCDL 705
+NPC+HAG C + + + C CL + G C++
Sbjct: 9 SLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEI 43
Score = 40.7 bits (96), Expect = 8e-04
Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 13/55 (23%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNG 1671
H G C D +N + CEC G+TG C++++ L
Sbjct: 92 LHNGRCLDKINEFQCECPTGFTGHL-------------CQVDLHHILDAQKMVWN 133
Score = 40.7 bits (96), Expect = 8e-04
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 1656 EINVPDCLPGACHNNGTCVDKVGGFECRCPPGFVGSR 1692
+++ C + G C++ +G FEC+C G+ G R
Sbjct: 4 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPR 40
Score = 33.3 bits (77), Expect = 0.23
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 1804 GSYLCECAKGYEGRDCLINTDDCAS 1828
G + C C GYEG C +NTD+CAS
Sbjct: 64 GEFQCICMPGYEGVHCEVNTDECAS 88
Score = 31.8 bits (73), Expect = 0.71
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 1804 GSYLCECAKGYEGRDCLINTDDCAS 1828
GS+ C+C +GY G C I+ ++C S
Sbjct: 26 GSFECQCLQGYTGPRCEIDVNECVS 50
Score = 31.4 bits (72), Expect = 1.2
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 1800 TERNGSYLCECAKGYEGRDCLINTDDCAS 1828
++ + CEC G+ G C ++
Sbjct: 98 LDKINEFQCECPTGFTGHLCQVDLHHILD 126
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo
sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Length = 195
Score = 168 bits (426), Expect = 2e-47
Identities = 37/188 (19%), Positives = 57/188 (30%), Gaps = 7/188 (3%)
Query: 1242 DECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYS 1301
EC C + E N + ++C ++PC+N KC DG+ Y+
Sbjct: 10 RECMEETCSYEEARE-----VFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYT 64
Query: 1302 CECLPGYTGLHCETNINE-CASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECAS 1360
C CL G+ G +CE + C+ + C + + C C RGY A
Sbjct: 65 CTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGP 124
Query: 1361 DPCLNGGTCEDGLNQFICHCKPGY-GGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQ 1419
PC + G D +P ++ D
Sbjct: 125 YPCGKQTLERRKRSVAQATSSSGEAPDSITWKPYDAADLDPTENPFDLLDFNQTQPERGD 184
Query: 1420 IGYTGINC 1427
T I
Sbjct: 185 NNLTRIVG 192
Score = 161 bits (408), Expect = 5e-45
Identities = 41/218 (18%), Positives = 65/218 (29%), Gaps = 32/218 (14%)
Query: 943 EDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEV 1002
E++ + L C + + K E + + D C + PCQN G C D +
Sbjct: 1 EEMKKGHLERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGL 60
Query: 1003 GDYSCLCVDGFSGKHCEVDIDE-CSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCE 1061
G+Y+C C++GF GK+CE+ + CS +
Sbjct: 61 GEYTCTCLEGFEGKNCELFTRKLCSLDNGDCD---------------------------- 92
Query: 1062 HDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFT- 1120
C S C+C +G+T +PC + G
Sbjct: 93 --QFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLERRKRSVAQATSSSGEAP 150
Query: 1121 GTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFT 1158
+ D +P N D T T
Sbjct: 151 DSITWKPYDAADLDPTENPFDLLDFNQTQPERGDNNLT 188
Score = 159 bits (404), Expect = 1e-44
Identities = 38/180 (21%), Positives = 56/180 (31%), Gaps = 3/180 (1%)
Query: 1133 SNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECL 1192
C+ + + + D C +SPC N G CKD + YTC CL
Sbjct: 9 ERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCL 68
Query: 1193 AGFTGMSCETNIND-CASNPC-HRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQ 1250
GF G +CE C+ + C + +NS C+C G+T A PC
Sbjct: 69 EGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCG 128
Query: 1251 FGGQCEDLINGYQCRCKPG-TSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYT 1309
+ Q G + + +P N +D T
Sbjct: 129 KQTLERRKRSVAQATSSSGEAPDSITWKPYDAADLDPTENPFDLLDFNQTQPERGDNNLT 188
Score = 159 bits (403), Expect = 2e-44
Identities = 31/178 (17%), Positives = 59/178 (33%), Gaps = 3/178 (1%)
Query: 1059 PCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPG 1118
C + + + + ++CE+ PCQN G C D G + C C+ G
Sbjct: 11 ECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEG 70
Query: 1119 FTGTQCETDIDE-CASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNG 1177
F G CE + C+ + C++ N+ C+C G+T + PC
Sbjct: 71 FEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQ 130
Query: 1178 GICKDSIAGYTCECLAGFT-GMSCETNINDCASNPC-HRGECIDGENSFTCACHPGFT 1233
+ + + +G + +P + + +D + T
Sbjct: 131 TLERRKRSVAQATSSSGEAPDSITWKPYDAADLDPTENPFDLLDFNQTQPERGDNNLT 188
Score = 157 bits (399), Expect = 7e-44
Identities = 27/175 (15%), Positives = 46/175 (26%), Gaps = 2/175 (1%)
Query: 1284 SNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECP 1343
C + + + + ++C ++PC N G C D + + C C
Sbjct: 9 ERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCL 68
Query: 1344 RGYYDARCLSDVDE-CASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQ 1402
G+ C + C+ D C + N +C C GY G PC
Sbjct: 69 EGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCG 128
Query: 1403 HGGICTDHLNGYTCECQIGYT-GINCEINIDDCAFKPCRHGGTCIDLVNAYKCVC 1456
+ + G D P + +D
Sbjct: 129 KQTLERRKRSVAQATSSSGEAPDSITWKPYDAADLDPTENPFDLLDFNQTQPERG 183
Score = 156 bits (396), Expect = 2e-43
Identities = 29/175 (16%), Positives = 48/175 (27%), Gaps = 3/175 (1%)
Query: 1095 SHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACP 1154
C + ++ D D+C ++PC N G C D + + C C
Sbjct: 9 ERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCL 68
Query: 1155 IGFTGSHCQINIDD-CVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCH 1213
GF G +C++ C C + C C G+T PC
Sbjct: 69 EGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCG 128
Query: 1214 RG-ECIDGENSFTCACHPGFT-GALCNTQLDECASNPCQFGGQCEDLINGYQCRC 1266
+ + G ++ D +P + D R
Sbjct: 129 KQTLERRKRSVAQATSSSGEAPDSITWKPYDAADLDPTENPFDLLDFNQTQPERG 183
Score = 141 bits (358), Expect = 2e-38
Identities = 26/165 (15%), Positives = 45/165 (27%), Gaps = 3/165 (1%)
Query: 873 KPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQDFACHC 932
+ C + + ++ D C + CQ+ +C ++ C C
Sbjct: 10 RECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLG--EYTCTC 67
Query: 933 GVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPC 992
G+ G+ C + CH S +C CA+GY D +PC
Sbjct: 68 LEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPC 127
Query: 993 QNGGTCLDEVGDYSCLCVDGFS-GKHCEVDIDECSSNPCHNGATC 1036
+ G + D +P N
Sbjct: 128 GKQTLERRKRSVAQATSSSGEAPDSITWKPYDAADLDPTENPFDL 172
Score = 126 bits (318), Expect = 5e-33
Identities = 32/196 (16%), Positives = 53/196 (27%), Gaps = 14/196 (7%)
Query: 228 PCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYS 287
C C + N ++ D C + CQN C DG+ +Y+
Sbjct: 11 ECMEETCSYEEAR------EVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYT 64
Query: 288 CLCLATYTGDLCEQDVDE-CSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDC 346
C CL + G CE + CS+ C C C G+T D
Sbjct: 65 CTCLEGFEGKNCELFTRKLCSLDN--GDCDQFCHEEQNSVVCSCARGYTLADNGKACIPT 122
Query: 347 AGAACFNGATCIDRVGSFYCQCTPGKTG--LLCHLEDACTSNPCHADAICDTNPIINGSY 404
C + + G+ + DA +P N +
Sbjct: 123 GPYPCGKQTLERRKRSVAQATSSSGEAPDSITWKPYDAADLDPTENPFDLLD---FNQTQ 179
Query: 405 TCSCASGYKGVNCSED 420
+ + ++
Sbjct: 180 PERGDNNLTRIVGGQE 195
Score = 124 bits (312), Expect = 3e-32
Identities = 31/194 (15%), Positives = 49/194 (25%), Gaps = 19/194 (9%)
Query: 273 CQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVN 332
C + + T +D D+C P C N C + +G ++C C+
Sbjct: 12 CMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSP--CQNQGKCKDGLGEYTCTCLE 69
Query: 333 GWTGPDCSLNIDD-CAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLE-DACTSNPCHA 390
G+ G +C L C+ C + S C C G T PC
Sbjct: 70 GFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGK 129
Query: 391 DAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCID 450
+ + +SG D P + +D
Sbjct: 130 QTLERRK---RSVAQATSSSGEAP------------DSITWKPYDAADLDPTENPFDLLD 174
Query: 451 LVNAYKCVCQVPYT 464
T
Sbjct: 175 FNQTQPERGDNNLT 188
Score = 123 bits (311), Expect = 5e-32
Identities = 37/227 (16%), Positives = 58/227 (25%), Gaps = 45/227 (19%)
Query: 71 QCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGECFNTH 130
+ L+ C C D +D +C PC +
Sbjct: 5 KGHLERECMEETCSYEEARE-----VFEDSDKTNEFWNKYKDGDQCETSPCQNQ------ 53
Query: 131 GSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNE-C 189
G C + G + C C +GF G CE + C
Sbjct: 54 -----------------------------GKCKDGLGEYTCTCLEGFEGKNCELFTRKLC 84
Query: 190 ESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYE 249
D C ++ + C C GYT + +P P PC + R + +
Sbjct: 85 SLDNGDCDQFCHEEQNSVVCSCA--RGYTLADNGKACIPTGPYPCGKQTLERRKRS-VAQ 141
Query: 250 CECQSGYR-GKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYT 295
SG + D + +N +D T
Sbjct: 142 ATSSSGEAPDSITWKPYDAADLDPTENPFDLLDFNQTQPERGDNNLT 188
Score = 120 bits (303), Expect = 5e-31
Identities = 30/218 (13%), Positives = 44/218 (20%), Gaps = 43/218 (19%)
Query: 40 CDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCELQ-DHCASSPCRNGAVCTSLEDTYEC 98
C C D C +SPC+N C Y C
Sbjct: 12 CMEETCSYEEAR------EVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTC 65
Query: 99 DCAPGFVGQTCSEDIIECVDDPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEH 158
C GF G+ C + + +
Sbjct: 66 TCLEGFEGKNCELFTRKLC----------------------------------SLDNGDC 91
Query: 159 DGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYT 218
D C S C+C +G+T +PC +
Sbjct: 92 DQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLERRKRSVAQATS-SSGEAP 150
Query: 219 GQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGY 256
Y D P +N + N +
Sbjct: 151 DSITWKPYDAADLDPTENPFDLLDF-NQTQPERGDNNL 187
Score = 109 bits (274), Expect = 4e-27
Identities = 34/214 (15%), Positives = 50/214 (23%), Gaps = 45/214 (21%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYT 60
C + + + C++ PC N G C L YT
Sbjct: 12 CMEETCSY-----EEAREVFEDSDKTNEFWNKYKDG-DQCETSPCQNQGKCK-DGLGEYT 64
Query: 61 CTCAPGFTGSQCEL--QDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVD 118
CTC GF G CEL + C+ C +++ C CA G+ + I
Sbjct: 65 CTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGP 124
Query: 119 DPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFT 178
PC + G
Sbjct: 125 YPCGKQ-----------------------------------TLERRKRSVAQATSSSGEA 149
Query: 179 -GPRCETNVNECESHPCQNDGSCLDDPGTFRCVC 211
+ + P +N LD T
Sbjct: 150 PDSITWKPYDAADLDPTENPFDLLDFNQTQPERG 183
Score = 102 bits (257), Expect = 8e-25
Identities = 31/172 (18%), Positives = 47/172 (27%), Gaps = 18/172 (10%)
Query: 1360 SDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQ 1419
C+ + + D D+C ++PCQ+ G C D L YTC C
Sbjct: 9 ERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCL 68
Query: 1420 IGYTGINCEINIDD-CAFKPCRHGGTCIDLVNAYKCVCAKAGNHRCDDECNTIACHFDGN 1478
G+ G NCE+ C+ C + N+ C CA+ +
Sbjct: 69 EGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARG---------------YTLA 113
Query: 1479 DCSLGINPWINCTANINCWEVFMNGRCDEVCNNPQCLFDGRDCEKNLQPCNP 1530
D P E R + K +
Sbjct: 114 DNGKACIPTGPYPCGKQTLER--RKRSVAQATSSSGEAPDSITWKPYDAADL 163
Score = 92.5 bits (230), Expect = 4e-21
Identities = 29/203 (14%), Positives = 51/203 (25%), Gaps = 28/203 (13%)
Query: 351 CFNGATCIDRVGSFYCQCTPGKTGLLCHLE-DACTSNPCHADAICDTNPIINGSYTCSCA 409
C + + + + D C ++PC C G YTC+C
Sbjct: 12 CMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGL---GEYTCTCL 68
Query: 410 SGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCH 469
G++G NC + C+ C + N+ C C YT D
Sbjct: 69 EGFEGKNCELFTRKL------------CSLDNGDCDQFCHEEQNSVVCSCARGYTLADNG 116
Query: 470 QKLDPCVPNSACVRCLTPGMIVIRSWILVYRTERMVIDFGMKHIGSRCEGDINECLSNPC 529
+ P P C + + V + + S + +P
Sbjct: 117 KACIPTGPYP----CGKQTLERRK--RSVAQATSSSGEAP----DSITWKPYDAADLDPT 166
Query: 530 SSHGTLDCVQLVNNYHCNCRPGY 552
+ +
Sbjct: 167 ENPFD--LLDFNQTQPERGDNNL 187
Score = 89.8 bits (223), Expect = 3e-20
Identities = 23/172 (13%), Positives = 43/172 (25%), Gaps = 32/172 (18%)
Query: 514 GSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASP 573
D ++C ++PC + G C + Y C C G+ G++CE+ +
Sbjct: 35 FWNKYKDGDQCETSPCQNQGK--CKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGD-- 90
Query: 574 TLAPLTVLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCD 633
C C C Y+ +
Sbjct: 91 ---------------------------CDQFCHEEQNSVVCSCARGYTLADNGKACIPTG 123
Query: 634 SNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCED 685
PC R ++ + G + +P ++ D
Sbjct: 124 PYPCGKQTLER-RKRSVAQATSSSGEAPDSITWKPYDAADLDPTENPFDLLD 174
Score = 81.3 bits (201), Expect = 2e-17
Identities = 27/184 (14%), Positives = 39/184 (21%), Gaps = 40/184 (21%)
Query: 522 NECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAPLTVL 581
EC+ C + + + SP
Sbjct: 10 RECMEETC-------SYEEAREVFEDSDKTNEFWNKY-----KDGDQCETSPCQ------ 51
Query: 582 WIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYD-CDSNPCQNG 640
N G C G +TC C + + G+NCE F C +
Sbjct: 52 -------------------NQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCD 92
Query: 641 GFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNG 700
FC E C C G T PC + +
Sbjct: 93 QFCHE-EQNSVVCSCARGYTLADNGKAC-IPTGPYPCGKQTLERRKRSVAQATSSSGEAP 150
Query: 701 KNCD 704
+
Sbjct: 151 DSIT 154
Score = 80.6 bits (199), Expect = 5e-17
Identities = 16/110 (14%), Positives = 24/110 (21%), Gaps = 4/110 (3%)
Query: 867 IDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQ 926
C+ C + N+ C C YT D + P P C +
Sbjct: 81 RKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLERRKRS-- 138
Query: 927 DFACHCGVGWT-GRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGY 975
G + D P N + N +
Sbjct: 139 VAQATSSSGEAPDSITWKPYDAAD-LDPTENPFDLLDFNQTQPERGDNNL 187
Score = 71.3 bits (175), Expect = 7e-14
Identities = 29/268 (10%), Positives = 46/268 (17%), Gaps = 102/268 (38%)
Query: 377 CHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDD 436
HLE C C + + + N + D
Sbjct: 6 GHLERECMEETCSYEEARE--------VFEDSDKTN-------------EFWNKYKDGDQ 44
Query: 437 CAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVRCLTPGMIVIRSWI 496
C PC++ G C D + Y C C + G +C
Sbjct: 45 CETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKL--------------------- 83
Query: 497 LVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRH 556
C + C + N+ C+C GY
Sbjct: 84 ---------------------------CSLDNGDCDQF--CHEEQNSVVCSCARGYTLAD 114
Query: 557 CEVKDLAVKVTSMNASPTLAPLTVLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCIC 616
T +
Sbjct: 115 NG------------------------------KACIPTGPYPCGKQTLERRKRSVAQATS 144
Query: 617 PDNYS-GRNCEYFGYDCDSNPCQNGGFC 643
+ D +P +N
Sbjct: 145 SSGEAPDSITWKPYDAADLDPTENPFDL 172
Score = 63.2 bits (154), Expect = 4e-11
Identities = 15/114 (13%), Positives = 26/114 (22%), Gaps = 9/114 (7%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYT 60
C+ Q+ S CSC G++ + +PC +
Sbjct: 89 GDCDQFCHEEQN-----SVVCSCARGYTLADNGKAC-IPTGPYPCGKQTLER-RKRSVAQ 141
Query: 61 CTCAPGFTGSQ--CELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSED 112
T + G + D P N T ++
Sbjct: 142 ATSSSGEAPDSITWKPYDAADLDPTENPFDLLDFNQTQPERGDNNLTRIVGGQE 195
Score = 60.2 bits (146), Expect = 4e-10
Identities = 31/193 (16%), Positives = 53/193 (27%), Gaps = 44/193 (22%)
Query: 631 DCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADY 690
+C C D + D ++C ++PCQ+ G C+D + +Y
Sbjct: 11 ECMEETCSYEEAR------EVFEDSDKTNEFWNKYKD-GDQCETSPCQNQGKCKDGLGEY 63
Query: 691 ACYCLPMWNGKNCDLYDPLFRGGLGRDTKKQITSLSGFDFELEKEMEKCKQNNCRAKAGN 750
C CL + GKNC+L+ + C +N +
Sbjct: 64 TCTCLEGFEGKNCELFTR----------------------------KLCSLDNGD---CD 92
Query: 751 HRCDDECNTIACH----FDGNDCSLGINPWINCTANINCWEVFMNGRCDEVCNNPQCLFD 806
C +E N++ C + D P E R +
Sbjct: 93 QFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLER--RKRSVAQATSSSGEAP 150
Query: 807 GRDCEKNLQPCNP 819
K +
Sbjct: 151 DSITWKPYDAADL 163
Score = 54.4 bits (131), Expect = 4e-08
Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 14/77 (18%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPD-CLPGACHNNGTCVD 1675
Q+ G C D L YTC C G+ G CE+ C + C +
Sbjct: 51 QNQGKCKDGLGEYTCTCLEGFEGKN-------------CELFTRKLCSLDNGDCDQFCHE 97
Query: 1676 KVGGFECRCPPGFVGSR 1692
+ C C G+ +
Sbjct: 98 EQNSVVCSCARGYTLAD 114
Score = 52.8 bits (127), Expect = 1e-07
Identities = 12/88 (13%), Positives = 15/88 (17%), Gaps = 16/88 (18%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
C + N C C GYT P C K
Sbjct: 90 DCDQFCHEEQNSVVCSCARGYTLAD-------------NGKACIPTGPYPCGKQTLERRK 136
Query: 1677 VGGFECRCPPGFVGSRWTDA---ECFSN 1701
+ G T +
Sbjct: 137 RSVAQATSSSGEAPDSITWKPYDAADLD 164
Score = 43.6 bits (103), Expect = 2e-04
Identities = 12/71 (16%), Positives = 17/71 (23%), Gaps = 13/71 (18%)
Query: 1622 CTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDKVGGFE 1681
+ + + C C N G C D +G +
Sbjct: 18 SYEEAREVFEDSDKTNEFWN-------------KYKDGDQCETSPCQNQGKCKDGLGEYT 64
Query: 1682 CRCPPGFVGSR 1692
C C GF G
Sbjct: 65 CTCLEGFEGKN 75
Score = 38.6 bits (90), Expect = 0.008
Identities = 5/73 (6%), Positives = 8/73 (10%), Gaps = 12/73 (16%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
+ + G I N +D
Sbjct: 128 GKQTLERRKRSVAQATSSSGEAPDSI------------TWKPYDAADLDPTENPFDLLDF 175
Query: 1677 VGGFECRCPPGFV 1689
R
Sbjct: 176 NQTQPERGDNNLT 188
Score = 34.3 bits (79), Expect = 0.22
Identities = 26/252 (10%), Positives = 43/252 (17%), Gaps = 89/252 (35%)
Query: 670 NECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCDLYDPLFRGGLGRDTKKQITSLSGFD 729
EC C + E N
Sbjct: 10 RECMEETCSYEEARE-----VFEDSDKTNEFWNK-------------------------- 38
Query: 730 FELEKEMEKCKQNNCRAKAGNHRCDDECNTIACHFDGNDCSLGINPWINCTANINCWEVF 789
K+ ++C+ + C+ +C D C C G NC
Sbjct: 39 ---YKDGDQCETSPCQ---NQGKCKDGLGEYTCT-----CLEGFE-GKNCELFTRKLCSL 86
Query: 790 MNGRCDEVCNNPQCLFDGRDCEKNLQPCNPIYDGRLLFSQLNFARDHDPGVWLMYFLYSA 849
NG CD+ C+ + C C Y
Sbjct: 87 DNGDCDQFCHE---EQNSVVCS-----CARGYTL-------------------------- 112
Query: 850 ITIRRKLKPLQQQQPINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYT-GHDCHQKLDPC 908
PC + + + D
Sbjct: 113 -----------ADNGKACIPTGPYPCGKQTLERRKRSVAQATSSSGEAPDSITWKPYDAA 161
Query: 909 VPNRCQHGARCT 920
+ ++
Sbjct: 162 DLDPTENPFDLL 173
Score = 29.3 bits (66), Expect = 9.1
Identities = 9/30 (30%), Positives = 11/30 (36%)
Query: 1800 TERNGSYLCECAKGYEGRDCLINTDDCASY 1829
E S +C CA+GY D Y
Sbjct: 96 HEEQNSVVCSCARGYTLADNGKACIPTGPY 125
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling
pathway, WNT antagonist, MO cancer, glycosaminoglycan;
HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Length = 324
Score = 168 bits (428), Expect = 4e-46
Identities = 62/271 (22%), Positives = 89/271 (32%), Gaps = 32/271 (11%)
Query: 1060 CEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGF 1119
V G+ + G C + + + + T
Sbjct: 83 MADPTVNVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEV-DVIVMNSEGNTILKTPQNAI 141
Query: 1120 TGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGI 1179
C+ C NGG CN+ C CP GF G HC+ + C NGG+
Sbjct: 142 FFKTCQQA---ECPGGCRNGGFCNE---RRICECPDGFHGPHCEK---ALCTPRCMNGGL 192
Query: 1180 CKDSIAGYTCECLAGFTGMSCETNINDCASNPCH-RGECIDGENSFTCACHPGFTGALCN 1238
C + C C GF G++C+ S C G C C C PG G C
Sbjct: 193 C---VTPGFCICPPGFYGVNCDK---ANCSTTCFNGGTCF---YPGKCICPPGLEGEQC- 242
Query: 1239 TQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGIN 1298
++ +C PC+ GG+C I +C+C G G C + E C C +
Sbjct: 243 -EISKC-PQPCRNGGKC---IGKSKCKCSKGYQGDLCSKPVCEP---GCGAHGTCHEP-- 292
Query: 1299 RYSCECLPGYTGLHCETNINECASNPCANGG 1329
C+C G+ G HC +
Sbjct: 293 -NKCQCQEGWHGRHCNKRYEASLIGTKHHHH 322
Score = 167 bits (424), Expect = 1e-45
Identities = 62/265 (23%), Positives = 89/265 (33%), Gaps = 30/265 (11%)
Query: 1179 ICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRGECIDGENSFTCACHPGFTGALCN 1238
+ + + G C + A+ N+ C
Sbjct: 88 VNVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEVDVIVMNSEGNTILKTPQNAIFFKTCQ 147
Query: 1239 TQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGIN 1298
C+ GG C + C C G G +CE + + C NG CV
Sbjct: 148 Q---AECPGGCRNGGFCNE---RRICECPDGFHGPHCEKALC---TPRCMNGGLCV---T 195
Query: 1299 RYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDEC 1358
C C PG+ G++C+ S C NGG C KC CP G +C ++ +C
Sbjct: 196 PGFCICPPGFYGVNCDKA---NCSTTCFNGGTCFY---PGKCICPPGLEGEQC--EISKC 247
Query: 1359 ASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCEC 1418
PC NGG C + + C C GY G C + E C G C + C+C
Sbjct: 248 -PQPCRNGGKC---IGKSKCKCSKGYQGDLCSKPVCEP---GCGAHGTCHE---PNKCQC 297
Query: 1419 QIGYTGINCEINIDDCAFKPCRHGG 1443
Q G+ G +C + H
Sbjct: 298 QEGWHGRHCNKRYEASLIGTKHHHH 322
Score = 162 bits (411), Expect = 7e-44
Identities = 62/266 (23%), Positives = 83/266 (31%), Gaps = 32/266 (12%)
Query: 1141 ICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSC 1200
+ L+ T + G C D + + + +C
Sbjct: 88 VNVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEV-DVIVMNSEGNTILKTPQNAIFFKTC 146
Query: 1201 ETNINDCASNPCH-RGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLI 1259
+ C G C + C C GF G C + C GG C +
Sbjct: 147 QQA---ECPGGCRNGGFCNER---RICECPDGFHGPHCEK---ALCTPRCMNGGLC---V 194
Query: 1260 NGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINE 1319
C C PG G NC+ S C NG C C C PG G CE +
Sbjct: 195 TPGFCICPPGFYGVNCDKA---NCSTTCFNGGTCFYP---GKCICPPGLEGEQCEIS--- 245
Query: 1320 CASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICH 1379
PC NGG C+ KC+C +GY C V E C GTC + C
Sbjct: 246 KCPQPCRNGGKCIG---KSKCKCSKGYQGDLCSKPVCEP---GCGAHGTCHEP---NKCQ 296
Query: 1380 CKPGYGGKRCEFDIDECGSNPCQHGG 1405
C+ G+ G+ C + H
Sbjct: 297 CQEGWHGRHCNKRYEASLIGTKHHHH 322
Score = 158 bits (401), Expect = 2e-42
Identities = 70/309 (22%), Positives = 93/309 (30%), Gaps = 64/309 (20%)
Query: 946 DECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEVGDY 1005
D+ ++ P G+ + + G CL D A+F + E
Sbjct: 79 DKGIMADPT----VNVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEV-DVIVMNSEGNTI 133
Query: 1006 SCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGT 1065
+ K C+ C NG CN
Sbjct: 134 LKTPQNAIFFKTCQQA---ECPGGCRNGGFCN---------------------------- 162
Query: 1066 CVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCE 1125
C C GF GP CE + C N G C+ C+C PGF G C+
Sbjct: 163 -----ERRICECPDGFHGPHCEKALCTP---RCMNGGLCVT---PGFCICPPGFYGVNCD 211
Query: 1126 TDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIA 1185
S C NGG C KC CP G G C+I PC NGG C I
Sbjct: 212 KA---NCSTTCFNGGTC---FYPGKCICPPGLEGEQCEI---SKCPQPCRNGGKC---IG 259
Query: 1186 GYTCECLAGFTGMSCETNINDCASNPCHRGECIDGENSFTCACHPGFTGALCNTQLDECA 1245
C+C G+ G C + + G C + C C G+ G CN + +
Sbjct: 260 KSKCKCSKGYQGDLCSKPVCEP--GCGAHGTCHEP---NKCQCQEGWHGRHCNKRYEASL 314
Query: 1246 SNPCQFGGQ 1254
Sbjct: 315 IGTKHHHHH 323
Score = 146 bits (370), Expect = 2e-38
Identities = 68/298 (22%), Positives = 92/298 (30%), Gaps = 64/298 (21%)
Query: 881 CIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQDFACHCGVGWTGRY 940
+ L+ V G C K D ++ +
Sbjct: 89 NVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEVDV---IVMNSEGNTILKTPQNAIFFKT 145
Query: 941 CNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLD 1000
C EC CRNG C N +CEC G+ G C + C NGG C
Sbjct: 146 C--QQAEC--PGGCRNGGFC---NERRICECPDGFHGPHC---EKALCTPRCMNGGLC-- 193
Query: 1001 EVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPC 1060
V C+C GF G +C+ S C NG TC
Sbjct: 194 -VTPGFCICPPGFYGVNCDKA---NCSTTCFNGGTCFY---------------------- 227
Query: 1061 EHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFT 1120
C C G G +CE +++C PC+N G C+ +C C G+
Sbjct: 228 -----------PGKCICPPGLEGEQCE--ISKC-PQPCRNGGKCIGK---SKCKCSKGYQ 270
Query: 1121 GTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGG 1178
G C + E C G C KC C G+ G HC + + H+
Sbjct: 271 GDLCSKPVCEP---GCGAHGTC---HEPNKCQCQEGWHGRHCNKRYEASLIGTKHHHH 322
Score = 141 bits (357), Expect = 1e-36
Identities = 57/275 (20%), Positives = 78/275 (28%), Gaps = 63/275 (22%)
Query: 866 NIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANF 925
D N Q C Q P C++G C
Sbjct: 111 GKQDGVAAFEVDVIVMNSEGNTILKTPQNAIFFKTCQQ---AECPGGCRNGGFCNER--- 164
Query: 926 QDFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTD 985
C C G+ G +C + + + C NG C C C G+ G +C
Sbjct: 165 --RICECPDGFHGPHCEKALC----TPRCMNGGLCVT---PGFCICPPGFYGVNC---DK 212
Query: 986 DCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIF 1045
S C NGGTC C+C G G+ CE+ PC NG C
Sbjct: 213 ANCSTTCFNGGTC---FYPGKCICPPGLEGEQCEIS---KCPQPCRNGGKCI-------- 258
Query: 1046 FTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCL 1105
G C C++G+ G C V E C G+C
Sbjct: 259 -------------------------GKSKCKCSKGYQGDLCSKPVCEP---GCGAHGTCH 290
Query: 1106 DDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGG 1140
+ +C C G+ G C + +
Sbjct: 291 EP---NKCQCQEGWHGRHCNKRYEASLIGTKHHHH 322
Score = 138 bits (349), Expect = 1e-35
Identities = 69/305 (22%), Positives = 93/305 (30%), Gaps = 70/305 (22%)
Query: 50 TCTLKSLDRYTCTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTC 109
T + L + G C + ++ + V S +T +TC
Sbjct: 87 TVNVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEVDVIVMNSEGNTILKTPQNAIFFKTC 146
Query: 110 SEDIIECVDDPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSF 169
+ EC C + G C
Sbjct: 147 QQA------------ECPG--------------------------GCRNGGFCNE---RR 165
Query: 170 ACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPC 229
C C GF GP CE + C N G C+ C+C PG+ G NC+
Sbjct: 166 ICECPDGFHGPHCEKALCTP---RCMNGGLCVTPG-----FCICPPGFYGVNCD---KAN 214
Query: 230 DPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCL 289
+ C NGG C +C C G G+ CE + P C+NG C I K C
Sbjct: 215 CSTTCFNGGTCFY----PGKCICPPGLEGEQCEISKCPQP---CRNGGKC---IGKSKCK 264
Query: 290 CLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGA 349
C Y GDLC + V E C TC C C GW G C+ +
Sbjct: 265 CSKGYQGDLCSKPVCEP-----GCGAHGTCHE---PNKCQCQEGWHGRHCNKRYEASLIG 316
Query: 350 ACFNG 354
+
Sbjct: 317 TKHHH 321
Score = 135 bits (342), Expect = 1e-34
Identities = 60/275 (21%), Positives = 88/275 (32%), Gaps = 38/275 (13%)
Query: 156 CEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEP 215
V G+ + G C + + + + +
Sbjct: 83 MADPTVNVPLLGTVPHKASVVQVGFPCLGK---QDGVAAFEVDVIVMNSEGNTILKTPQN 139
Query: 216 GYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQN 275
+ C+ P C+NGG C E CEC G+ G +CE+ + C N
Sbjct: 140 AIFFKTCQ---QAECPGGCRNGGFCNE----RRICECPDGFHGPHCEKALCTPR---CMN 189
Query: 276 GATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWT 335
G C + C+C + G C++ + C NG TC CIC G
Sbjct: 190 GGLC---VTPGFCICPPGFYGVNCDKANC-----STTCFNGGTCFYP---GKCICPPGLE 238
Query: 336 GPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAICD 395
G C I C C NG C +G C+C+ G G LC C A C
Sbjct: 239 GEQCE--ISKCPQP-CRNGGKC---IGKSKCKCSKGYQGDLC--SKPVCEPGCGAHGTC- 289
Query: 396 TNPIINGSYTCSCASGYKGVNCSEDINECEQGINC 430
+ C C G+ G +C++ G
Sbjct: 290 -----HEPNKCQCQEGWHGRHCNKRYEASLIGTKH 319
Score = 128 bits (322), Expect = 4e-32
Identities = 62/285 (21%), Positives = 88/285 (30%), Gaps = 58/285 (20%)
Query: 197 DGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGY 256
G+ + C G D + G Q+
Sbjct: 93 LGTVPHKASVVQVGFPCLGKQDGVAA----FEVDVIVMNSEGNT-------ILKTPQNAI 141
Query: 257 RGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNG 316
K C++ C+NG C + C C + G CE+ + C NG
Sbjct: 142 FFKTCQQAECPGG---CRNGGFCNER---RICECPDGFHGPHCEKA-----LCTPRCMNG 190
Query: 317 ATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLL 376
C CIC G+ G +C CFNG TC C C PG G
Sbjct: 191 GLCVTP---GFCICPPGFYGVNCD---KANCSTTCFNGGTCFY---PGKCICPPGLEGEQ 241
Query: 377 CHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDD 436
C E + PC C G C C+ GY+G CS+ + E
Sbjct: 242 C--EISKCPQPCRNGGKC------IGKSKCKCSKGYQGDLCSKPVCEP------------ 281
Query: 437 CAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSAC 481
C GTC + KC CQ + G C+++ + + +
Sbjct: 282 ----GCGAHGTCHE---PNKCQCQEGWHGRHCNKRYEASLIGTKH 319
Score = 127 bits (320), Expect = 7e-32
Identities = 59/276 (21%), Positives = 84/276 (30%), Gaps = 74/276 (26%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYT 60
+ N + + + C+ C NGG C +R
Sbjct: 120 EVDVIVMNSEGN-----TILKTPQNAIFFKTCQQAECPG----GCRNGGFCN----ERRI 166
Query: 61 CTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDP 120
C C GF G CE + C NG +C C C PGF G C +
Sbjct: 167 CECPDGFHGPHCE--KALCTPRCMNGGLCV---TPGFCICPPGFYGVNCDKAN------- 214
Query: 121 CVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGP 180
+ C + GTC C C G G
Sbjct: 215 -------------------------------CSTTCFNGGTCFYP---GKCICPPGLEGE 240
Query: 181 RCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVC 240
+CE +++C PC+N G C+ C C GY G C P C G C
Sbjct: 241 QCE--ISKC-PQPCRNGGKCIGKS-----KCKCSKGYQGDLCS---KPVCEPGCGAHGTC 289
Query: 241 RELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNG 276
E +C+CQ G+ G++C + + +
Sbjct: 290 HE----PNKCQCQEGWHGRHCNKRYEASLIGTKHHH 321
Score = 113 bits (284), Expect = 5e-27
Identities = 58/238 (24%), Positives = 78/238 (32%), Gaps = 70/238 (29%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYT 60
C+NGG CN C CP GF CE + CMNGG C
Sbjct: 155 CRNGGFCN--------ERRICECPDGFHGPHCEKALCTP----RCMNGGLCV----TPGF 198
Query: 61 CTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDP 120
C C PGF G C+ S+ C NG C +C C PG G+ C
Sbjct: 199 CICPPGFYGVNCD--KANCSTTCFNGGTCF---YPGKCICPPGLEGEQCEIS-------- 245
Query: 121 CVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGP 180
+C PC + G C+ C C++G+ G
Sbjct: 246 ----KCPQ--------------------------PCRNGGKCIG---KSKCKCSKGYQGD 272
Query: 181 RCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGG 238
C V E C G+C + C C+ G+ G++C +Y +
Sbjct: 273 LCSKPVCEP---GCGAHGTCHEPN-----KCQCQEGWHGRHCNKRYEASLIGTKHHHH 322
Score = 112 bits (281), Expect = 9e-27
Identities = 62/276 (22%), Positives = 88/276 (31%), Gaps = 49/276 (17%)
Query: 1255 CEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCE 1314
L+ + G C + + + N C+
Sbjct: 89 NVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEV-DVIVMNSEGNTILKTPQNAIFFKTCQ 147
Query: 1315 TNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLN 1374
C NGG C + CECP G++ C + C+NGG C +
Sbjct: 148 QA---ECPGGCRNGGFCNE---RRICECPDGFHGPHCEKA---LCTPRCMNGGLC---VT 195
Query: 1375 QFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDC 1434
C C PG+ G C+ S C +GG C C C G G CEI+
Sbjct: 196 PGFCICPPGFYGVNCDKA---NCSTTCFNGGTCF---YPGKCICPPGLEGEQCEISKCPQ 249
Query: 1435 AFKPCRHGGTCIDLVNAYKCVCAKAGNHRCDDECNTIACHFDGNDCSLGINPWINCTANI 1494
PCR+GG C + KC C+K + G+ CS + C A+
Sbjct: 250 ---PCRNGGKC---IGKSKCKCSK---------------GYQGDLCSKPVCEP-GCGAHG 287
Query: 1495 NCWEVFMNGRCDEVCNNPQCLFDGRDCEKNLQPCNP 1530
C E +C C + GR C K +
Sbjct: 288 TCHE---PNKC--QCQEG---WHGRHCNKRYEASLI 315
Score = 103 bits (259), Expect = 7e-24
Identities = 66/343 (19%), Positives = 89/343 (25%), Gaps = 109/343 (31%)
Query: 218 TGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGA 277
+ P P G V + + C G E +
Sbjct: 76 RSLDKGIMADPTVNVPLL-GTVPHKASVVQVGFPCLGKQDGVAAFEV----------DVI 124
Query: 278 TCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGP 337
N C+Q P C NG C C C +G+ GP
Sbjct: 125 VMNSEGNTILKTPQNAIFFKTCQQAEC-----PGGCRNGGFCNE---RRICECPDGFHGP 176
Query: 338 DCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAICDTN 397
C + C NG C+ +C C PG G+ C + A S C C
Sbjct: 177 HCEKALCTPR---CMNGGLCVT---PGFCICPPGFYGVNC--DKANCSTTCFNGGTC--- 225
Query: 398 PIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKC 457
C C G +G C I++C Q PCR+GG C + KC
Sbjct: 226 ---FYPGKCICPPGLEGEQCE--ISKCPQ--------------PCRNGGKC---IGKSKC 263
Query: 458 VCQVPYTGHDCHQKLDPCVPNSACVRCLTPGMIVIRSWILVYRTERMVIDFGMKHIGSRC 517
C Y G C + +
Sbjct: 264 KCSKGYQGDLCSKPVCEP------------------------------------------ 281
Query: 518 EGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVK 560
C +HGT C C+ G+ GRHC +
Sbjct: 282 ----------GCGAHGTC-----HEPNKCQCQEGWHGRHCNKR 309
Score = 99.5 bits (248), Expect = 2e-22
Identities = 57/378 (15%), Positives = 76/378 (20%), Gaps = 129/378 (34%)
Query: 304 DECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGS 363
S+ + + +G G C D A + +
Sbjct: 74 SLRSLDKGIMADPTVNVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEV-DVIVMNSEGNT 132
Query: 364 FYCQCTPGKTGLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINE 423
C + A C C N C C G+ G +C + +
Sbjct: 133 ILKTPQNAIFFKTC--QQAECPGGCRNGGFC------NERRICECPDGFHGPHCEKALCT 184
Query: 424 CEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVR 483
C +GG C V C+C + G +C +
Sbjct: 185 P----------------RCMNGGLC---VTPGFCICPPGFYGVNCDK------------- 212
Query: 484 CLTPGMIVIRSWILVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVNN 543
S C + GT C
Sbjct: 213 ---------------------------------------ANCSTTCFNGGT--CF---YP 228
Query: 544 YHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAPLTVLWIAYNWSTTTTATAALATWNGG 603
C C PG G CE+ NGG
Sbjct: 229 GKCICPPGLEGEQCEISKCPQPCR---------------------------------NGG 255
Query: 604 VCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTH 663
C G C C Y G C C G C +C C G G H
Sbjct: 256 KCI---GKSKCKCSKGYQGDLCS---KPVCEPGCGAHGTCHE----PNKCQCQEGWHGRH 305
Query: 664 CELDSRNECYSNPCQHAG 681
C H
Sbjct: 306 CNKRY-EASLIGTKHHHH 322
Score = 93.4 bits (232), Expect = 3e-20
Identities = 56/385 (14%), Positives = 81/385 (21%), Gaps = 138/385 (35%)
Query: 257 RGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNG 316
R + D + + CL G + +
Sbjct: 76 RSLDKGIMADPTVNVPLLGTVPHKASVVQVGFPCLGKQDGV------------AAFEVDV 123
Query: 317 ATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLL 376
+ N C C NG C + C+C G G
Sbjct: 124 IVMNSEGNTILKTPQNAIFFKTCQ---QAECPGGCRNGGFCNE---RRICECPDGFHGPH 177
Query: 377 CHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDD 436
C E A + C +C C C G+ GVNC +
Sbjct: 178 C--EKALCTPRCMNGGLC------VTPGFCICPPGFYGVNCDKANCST------------ 217
Query: 437 CAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVRCLTPGMIVIRSWI 496
C +GGTC KC+C G C
Sbjct: 218 ----TCFNGGTC---FYPGKCICPPGLEGEQC---------------------------- 242
Query: 497 LVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRH 556
+I++C PC + G C+ C C GY G
Sbjct: 243 -----------------------EISKC-PQPCRNGGK--CI---GKSKCKCSKGYQGDL 273
Query: 557 CEVKDLAVKVTSMNASPTLAPLTVLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCIC 616
C + G C + C C
Sbjct: 274 CS--------KPVCEPGCG-------------------------AHGTCH---EPNKCQC 297
Query: 617 PDNYSGRNCEYFGYDCDSNPCQNGG 641
+ + GR+C +
Sbjct: 298 QEGWHGRHCNKRYEASLIGTKHHHH 322
Score = 86.4 bits (214), Expect = 5e-18
Identities = 58/342 (16%), Positives = 79/342 (23%), Gaps = 102/342 (29%)
Query: 369 TPGKTGLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGI 428
G+ + + P+ G+ + G C +
Sbjct: 62 AAGQAEYFYEFLSLRSLDKGIMADPTVNVPL-LGTVPHKASVVQVGFPCLGKQDGVAAFE 120
Query: 429 NCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQK--LDPCVPNSACVRCLT 486
N Q C Q C C
Sbjct: 121 VD--------------VIVMNSEGNTILKTPQNAIFFKTCQQAECPGGCRNGGFCNERRI 166
Query: 487 ----PGMIVIRSWILVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVN 542
G G CE + C + G CV
Sbjct: 167 CECPDG-----------------------FHGPHCE---KALCTPRCMNGGL--CV---T 195
Query: 543 NYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAPLTVLWIAYNWSTTTTATAALATWNG 602
C C PG+ G +C+ A + +NG
Sbjct: 196 PGFCICPPGFYGVNCD---------------------------------KANCSTTCFNG 222
Query: 603 GVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGT 662
G C CICP G CE PC+NGG C G +C C G G
Sbjct: 223 GTCFY---PGKCICPPGLEGEQCEI---SKCPQPCRNGGKCI----GKSKCKCSKGYQGD 272
Query: 663 HCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCD 704
C C GTC + C C W+G++C+
Sbjct: 273 LCSKP----VCEPGCGAHGTCHE---PNKCQCQEGWHGRHCN 307
Score = 76.8 bits (189), Expect = 8e-15
Identities = 32/126 (25%), Positives = 42/126 (33%), Gaps = 21/126 (16%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYT 60
C NGGTC C CP G CEI PC NGG C +
Sbjct: 219 CFNGGTC--------FYPGKCICPPGLEGEQCEISKCPQ----PCRNGGKCI----GKSK 262
Query: 61 CTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDP 120
C C+ G+ G C C C + +C C G+ G+ C++ +
Sbjct: 263 CKCSKGYQGDLCSK--PVCEPGCGAHGTCH---EPNKCQCQEGWHGRHCNKRYEASLIGT 317
Query: 121 CVHGEC 126
H
Sbjct: 318 KHHHHH 323
Score = 71.4 bits (175), Expect = 5e-13
Identities = 38/204 (18%), Positives = 56/204 (27%), Gaps = 58/204 (28%)
Query: 793 RCDEVCNNPQCLFDGRDCEKNLQPCNPIYDGRLLFSQLNFARDHDPGVWLMYFLYSAITI 852
C++ P+C+ G C P + G
Sbjct: 177 HCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNC-------------------------- 210
Query: 853 RRKLKPLQQQQPINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNR 912
C +GGTC KC+C G C P
Sbjct: 211 --------------DKANCSTTCFNGGTC---FYPGKCICPPGLEGEQCEI---SKCPQP 250
Query: 913 CQHGARCTPSANFQDFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECA 972
C++G +C C C G+ G C++ V E C TCH C+C
Sbjct: 251 CRNGGKCI-----GKSKCKCSKGYQGDLCSKPVCEP----GCGAHGTCHE---PNKCQCQ 298
Query: 973 KGYEGRDCLINTDDCASFPCQNGG 996
+G+ GR C + +
Sbjct: 299 EGWHGRHCNKRYEASLIGTKHHHH 322
Score = 71.4 bits (175), Expect = 5e-13
Identities = 36/186 (19%), Positives = 51/186 (27%), Gaps = 50/186 (26%)
Query: 522 NECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAPLTVL 581
+ + N + + C+
Sbjct: 111 GKQDGVAAFEVDVIVMNSEGNTILKTPQNAIFFKTCQ----------------------- 147
Query: 582 WIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGG 641
A NGG C C CPD + G +CE + C NGG
Sbjct: 148 ----------QAECPGGCRNGGFCNE---RRICECPDGFHGPHCEK---ALCTPRCMNGG 191
Query: 642 FCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGK 701
C + C CPPG G +C+ S C + GTC C C P G+
Sbjct: 192 LCVT----PGFCICPPGFYGVNCDKA----NCSTTCFNGGTC---FYPGKCICPPGLEGE 240
Query: 702 NCDLYD 707
C++
Sbjct: 241 QCEISK 246
Score = 71.0 bits (174), Expect = 6e-13
Identities = 33/146 (22%), Positives = 48/146 (32%), Gaps = 14/146 (9%)
Query: 1330 VCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRC 1389
V V L+ + CL D A+ + N + + K C
Sbjct: 88 VNVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEV-DVIVMNSEGNTILKTPQNAIFFKTC 146
Query: 1390 EFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLV 1449
+ EC C++GG C + CEC G+ G +CE C +GG C V
Sbjct: 147 Q--QAEC-PGGCRNGGFCNE---RRICECPDGFHGPHCEK---ALCTPRCMNGGLC---V 194
Query: 1450 NAYKCVCAKA-GNHRCDDECNTIACH 1474
C+C CD + C
Sbjct: 195 TPGFCICPPGFYGVNCDKANCSTTCF 220
Score = 39.1 bits (91), Expect = 0.010
Identities = 17/83 (20%), Positives = 20/83 (24%), Gaps = 19/83 (22%)
Query: 1619 GGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDKVG 1678
+ N Q C+ PG C N G C +
Sbjct: 123 VIVMNSEGNTILKTPQNAIFFKT-------------CQQA---ECPGGCRNGGFCNE--- 163
Query: 1679 GFECRCPPGFVGSRWTDAECFSN 1701
C CP GF G A C
Sbjct: 164 RRICECPDGFHGPHCEKALCTPR 186
Score = 38.7 bits (90), Expect = 0.017
Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 22/76 (28%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
++GG C C+C GY G C V + C +GTC +
Sbjct: 252 RNGGKCI---GKSKCKCSKGYQGDL-------------CSKPVCEP---GCGAHGTCHE- 291
Query: 1677 VGGFECRCPPGFVGSR 1692
+C+C G+ G
Sbjct: 292 --PNKCQCQEGWHGRH 305
Score = 36.4 bits (84), Expect = 0.076
Identities = 20/82 (24%), Positives = 28/82 (34%), Gaps = 22/82 (26%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
+GG+C C C G+ G C+ C N GTC
Sbjct: 188 MNGGLCV---TPGFCICPPGFYGVN-------------CDK---ANCSTTCFNGGTCFY- 227
Query: 1677 VGGFECRCPPGFVGSRWTDAEC 1698
+C CPPG G + ++C
Sbjct: 228 --PGKCICPPGLEGEQCEISKC 247
Score = 36.0 bits (83), Expect = 0.11
Identities = 19/76 (25%), Positives = 24/76 (31%), Gaps = 22/76 (28%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
+GG C C C G G CEI P C N G C+
Sbjct: 220 FNGGTCF---YPGKCICPPGLEGEQ-------------CEI---SKCPQPCRNGGKCIG- 259
Query: 1677 VGGFECRCPPGFVGSR 1692
+C+C G+ G
Sbjct: 260 --KSKCKCSKGYQGDL 273
Score = 35.2 bits (81), Expect = 0.18
Identities = 24/82 (29%), Positives = 29/82 (35%), Gaps = 22/82 (26%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
++GG C + CEC G+ G + CE C N G CV
Sbjct: 156 RNGGFCNE---RRICECPDGFHGPH-------------CEK---ALCTPRCMNGGLCVT- 195
Query: 1677 VGGFECRCPPGFVGSRWTDAEC 1698
C CPPGF G A C
Sbjct: 196 --PGFCICPPGFYGVNCDKANC 215
Score = 31.4 bits (71), Expect = 3.4
Identities = 11/55 (20%), Positives = 17/55 (30%), Gaps = 16/55 (29%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNG 1671
G C + C+CQ G+ G + C L G H++
Sbjct: 284 GAHGTCHE---PNKCQCQEGWHGRH-------------CNKRYEASLIGTKHHHH 322
Score = 30.6 bits (69), Expect = 4.9
Identities = 6/90 (6%), Positives = 10/90 (11%), Gaps = 12/90 (13%)
Query: 618 DNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPC 677
+ + + P G C G
Sbjct: 73 LSLRSLDKGIMADPTVNVPLL-GTVPHKASVVQVGFPCLGKQDGVAA-----------FE 120
Query: 678 QHAGTCEDRIADYACYCLPMWNGKNCDLYD 707
K C +
Sbjct: 121 VDVIVMNSEGNTILKTPQNAIFFKTCQQAE 150
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD
finger, cell adhesion, innate immunity, extracellular MA
protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Length = 143
Score = 147 bits (374), Expect = 3e-41
Identities = 48/163 (29%), Positives = 69/163 (42%), Gaps = 35/163 (21%)
Query: 1281 ECYSNPCRNGAKCVDGI--NRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGF 1338
C NPC NG C+ G+ +SCEC G+T +C + + +
Sbjct: 2 ICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPT----------- 50
Query: 1339 KCECPRGYYDARCLSDVDECASDPCLNGGTCE-------DGLNQFICHCKPGYGGKRCEF 1391
C +PC NGGTCE D ++C C G+ G C+
Sbjct: 51 ---------------SAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQH 95
Query: 1392 DIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDC 1434
+I+EC PC++GGICTD + Y+CEC + G NC+
Sbjct: 96 NINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYKGGGH 138
Score = 147 bits (372), Expect = 5e-41
Identities = 52/166 (31%), Positives = 70/166 (42%), Gaps = 34/166 (20%)
Query: 1167 DDCVSSPCHNGGICKDSIA--GYTCECLAGFTGMSCETNINDCASNPCHRGECIDGENSF 1224
D C +PC NGGIC +A ++CEC GFT +C + + +
Sbjct: 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEE------------ 48
Query: 1225 TCACHPGFTGALCNTQLDECASNPCQFGGQCE-------DLINGYQCRCKPGTSGTNCEI 1277
T C NPC GG CE D GY C+C G +G +C+
Sbjct: 49 -------------PTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQH 95
Query: 1278 NINECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASN 1323
NINEC PC+NG C D + YSCEC + G +C+ +
Sbjct: 96 NINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYKGGGHHHH 141
Score = 143 bits (363), Expect = 9e-40
Identities = 52/140 (37%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 1092 ECESHPCQNDGSCLDD--PGTFRCVCMPGFTGTQCETDID------------ECASNPCL 1137
C+ +PC+N G CL G+F C C GFT C + ++ C NPC
Sbjct: 2 ICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCH 61
Query: 1138 NGGIC-------NDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCE 1190
NGG C D + C CP GF G HCQ NI++C PC NGGIC D +A Y+CE
Sbjct: 62 NGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCE 121
Query: 1191 CLAGFTGMSCETNINDCASN 1210
C F G +C+ +
Sbjct: 122 CPGEFMGRNCQYKGGGHHHH 141
Score = 134 bits (340), Expect = 1e-36
Identities = 48/135 (35%), Positives = 62/135 (45%), Gaps = 21/135 (15%)
Query: 1056 AGSPCEHDGTCVN--TPGSFACNCTQGFTGPRCETNV------------NECESHPCQND 1101
+PCE+ G C+ GSF+C C GFT P C + V C +PC N
Sbjct: 4 DPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNG 63
Query: 1102 GSCL-------DDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACP 1154
G+C D + C C GF G C+ +I+EC PC NGGIC DL+ + C CP
Sbjct: 64 GTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECP 123
Query: 1155 IGFTGSHCQINIDDC 1169
F G +CQ
Sbjct: 124 GEFMGRNCQYKGGGH 138
Score = 129 bits (326), Expect = 9e-35
Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 906 DPCVPNRCQHGARCTPSANFQDFACHCGVGWTGRYCNEDVDECQ-----------LSSPC 954
D C PN C++G C P F+C C G+T C+ V+ +PC
Sbjct: 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPC 60
Query: 955 RNGATCHNTNG-------SYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEVGDYSC 1007
NG TC + Y+C+C +G+ G C N ++C PC+NGG C D V +YSC
Sbjct: 61 HNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSC 120
Query: 1008 LCVDGFSGKHCEVDIDECSSN 1028
C F G++C+ +
Sbjct: 121 ECPGEFMGRNCQYKGGGHHHH 141
Score = 128 bits (323), Expect = 2e-34
Identities = 43/137 (31%), Positives = 59/137 (43%), Gaps = 18/137 (13%)
Query: 188 ECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESK------------YVPCDPSPCQ 235
C+ +PC+N G CL C C G+T NC S PC P+PC
Sbjct: 2 ICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCH 61
Query: 236 NGGVCRELDNLN------YECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCL 289
NGG C + Y C+C G+ G +C+ NI++C C+NG C D + YSC
Sbjct: 62 NGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCE 121
Query: 290 CLATYTGDLCEQDVDEC 306
C + G C+
Sbjct: 122 CPGEFMGRNCQYKGGGH 138
Score = 125 bits (317), Expect = 2e-33
Identities = 45/123 (36%), Positives = 59/123 (47%), Gaps = 21/123 (17%)
Query: 1356 DECASDPCLNGGTCEDGL--NQFICHCKPGYGGKRCEFDID------------ECGSNPC 1401
D C +PC NGG C GL F C C G+ C ++ C NPC
Sbjct: 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPC 60
Query: 1402 QHGGICT-------DHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKC 1454
+GG C D GY C+C G+ GI+C+ NI++C +PC++GG C DLV Y C
Sbjct: 61 HNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSC 120
Query: 1455 VCA 1457
C
Sbjct: 121 ECP 123
Score = 122 bits (308), Expect = 2e-32
Identities = 46/172 (26%), Positives = 61/172 (35%), Gaps = 52/172 (30%)
Query: 946 DECQLSSPCRNGATCHN--TNGSYLCECAKGYEGRDC------------LINTDDCASFP 991
D C +PC NG C +GS+ CEC G+ +C + C P
Sbjct: 1 DIC-DPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNP 59
Query: 992 CQNGGTCL-------DEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFI 1044
C NGGTC D Y C C GF+G HC+ +I+EC PC NG
Sbjct: 60 CHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNG----------- 108
Query: 1045 FFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESH 1096
G C + +++C C F G C+ H
Sbjct: 109 -------------------GICTDLVANYSCECPGEFMGRNCQYKGGGHHHH 141
Score = 113 bits (284), Expect = 4e-29
Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 36/170 (21%)
Query: 228 PCDPSPCQNGGVCRELDNLN-YECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKY 286
CDP+PC+NGG+C + CEC G+ NC ++
Sbjct: 2 ICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPT----------- 50
Query: 287 SCLCLATYTGDLCEQDVDECSIRPSVCHNGATCT-------NSVGGFSCICVNGWTGPDC 339
C+ P CHNG TC ++ G+ C C G+ G C
Sbjct: 51 ---------------SAGPCTPNP--CHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHC 93
Query: 340 SLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCH 389
NI++C C NG C D V ++ C+C G C + + H
Sbjct: 94 QHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYKGGGHHHHHH 143
Score = 112 bits (283), Expect = 6e-29
Identities = 45/165 (27%), Positives = 65/165 (39%), Gaps = 38/165 (23%)
Query: 76 DHCASSPCRNGAVCTSL--EDTYECDCAPGFVGQTCSEDIIECVDDPCV--HGECFNTHG 131
D C +PC NG +C + ++ C+C GF CS + D+ G C
Sbjct: 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPC----- 55
Query: 132 SYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCV-------NTPGSFACNCTQGFTGPRCET 184
+PC + GTC +T + C C +GF G C+
Sbjct: 56 --------------------TPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQH 95
Query: 185 NVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPC 229
N+NECE PC+N G C D + C C + G+NC+ K
Sbjct: 96 NINECEVEPCKNGGICTDLVANYSCECP--GEFMGRNCQYKGGGH 138
Score = 109 bits (275), Expect = 7e-28
Identities = 49/181 (27%), Positives = 69/181 (38%), Gaps = 46/181 (25%)
Query: 304 DECSIRPSVCHNGATCTNSV--GGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRV 361
D C P C NG C + G FSC C +G+T P+CS ++ + A
Sbjct: 1 DICDPNP--CENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSA------ 52
Query: 362 GSFYCQCTPGKTGLLCHLEDACTSNPCHADAICDTNPIIN----GSYTCSCASGYKGVNC 417
CT NPCH C+ + Y C C G+
Sbjct: 53 -------------------GPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGF----- 88
Query: 418 SEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVP 477
GI+C+ NI++C +PC++GG C DLV Y C C + G +C K
Sbjct: 89 --------NGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYKGGGHHH 140
Query: 478 N 478
+
Sbjct: 141 H 141
Score = 105 bits (265), Expect = 2e-26
Identities = 42/174 (24%), Positives = 54/174 (31%), Gaps = 56/174 (32%)
Query: 40 CDSFPCMNGGTCT-LKSLDRYTCTCAPGFTGSQCELQ-------------DHCASSPCRN 85
CD PC NGG C + ++C C GFT C C +PC N
Sbjct: 3 CDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHN 62
Query: 86 GAVCTSLE-------DTYECDCAPGFVGQTCSEDIIECVDDPCVHGECFNTHGSYTFQMI 138
G C E Y C C GF G C +I EC +PC +G
Sbjct: 63 GGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNG-------------- 108
Query: 139 FIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESH 192
G C + +++C C F G C+ H
Sbjct: 109 ---------------------GICTDLVANYSCECPGEFMGRNCQYKGGGHHHH 141
Score = 100 bits (250), Expect = 1e-24
Identities = 44/136 (32%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPV-----------ANSCDSFPCMNGG 49
C+NGG C + SF C CP GF+ C V A C PC NGG
Sbjct: 8 CENGGICLPGLADG---SFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGG 64
Query: 50 TCTLKS------LDRYTCTCAPGFTGSQCELQ-DHCASSPCRNGAVCTSLEDTYECDCAP 102
TC + Y C C GF G C+ + C PC+NG +CT L Y C+C
Sbjct: 65 TCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPG 124
Query: 103 GFVGQTCSEDIIECVD 118
F+G+ C
Sbjct: 125 EFMGRNCQYKGGGHHH 140
Score = 97.9 bits (244), Expect = 1e-23
Identities = 47/187 (25%), Positives = 62/187 (33%), Gaps = 60/187 (32%)
Query: 381 DACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFK 440
D C NPC IC + +GS++C C G+ NCS + + C
Sbjct: 1 DICDPNPCENGGIC-LPGLADGSFSCECPDGFTDPNCSSVVEVASDE-EEPTSAGPCTPN 58
Query: 441 PCRHGGTCI-------DLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVRCLTPGMIVIR 493
PC +GGTC D Y C C + G
Sbjct: 59 PCHNGGTCEISEAYRGDTFIGYVCKCPRGFNG---------------------------- 90
Query: 494 SWILVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYM 553
C+ +INEC PC + G C LV NY C C +M
Sbjct: 91 ---------------------IHCQHNINECEVEPCKNGGI--CTDLVANYSCECPGEFM 127
Query: 554 GRHCEVK 560
GR+C+ K
Sbjct: 128 GRNCQYK 134
Score = 97.9 bits (244), Expect = 1e-23
Identities = 45/125 (36%), Positives = 58/125 (46%), Gaps = 21/125 (16%)
Query: 601 NGGVCT--ALDGGHTCICPDNYSGRNCE------------YFGYDCDSNPCQNGGFCRSK 646
NGG+C DG +C CPD ++ NC C NPC NGG C
Sbjct: 10 NGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEIS 69
Query: 647 EG------GGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNG 700
E GY C CP G G HC+ + NEC PC++ G C D +A+Y+C C + G
Sbjct: 70 EAYRGDTFIGYVCKCPRGFNGIHCQHNI-NECEVEPCKNGGICTDLVANYSCECPGEFMG 128
Query: 701 KNCDL 705
+NC
Sbjct: 129 RNCQY 133
Score = 78.6 bits (194), Expect = 5e-17
Identities = 34/161 (21%), Positives = 58/161 (36%), Gaps = 29/161 (18%)
Query: 523 ECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVK-DLAVKVTSMNASPTLAPLTVL 581
C NPC + G ++ C C G+ +C ++A ++ P
Sbjct: 2 ICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCH 61
Query: 582 WIAYNWSTTTTATAALATWNGGVCTALDG-------GHTCICPDNYSGRNCEYFGYDCDS 634
NGG C + G+ C CP ++G +C++ +C+
Sbjct: 62 -------------------NGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEV 102
Query: 635 NPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSN 675
PC+NGG C Y C+CP G +C+ + +
Sbjct: 103 EPCKNGGICTD-LVANYSCECPGEFMGRNCQYKG-GGHHHH 141
Score = 74.0 bits (182), Expect = 3e-15
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 9/97 (9%)
Query: 860 QQQQPINIDDCAFKPCRHGGTCI-------DLVNAYKCVCQVPYTGHDCHQKLDPCVPNR 912
+++P + C PC +GGTC D Y C C + G C ++ C
Sbjct: 45 DEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEP 104
Query: 913 CQHGARCTPSANFQDFACHCGVGWTGRYCNEDVDECQ 949
C++G CT +++C C + GR C
Sbjct: 105 CKNGGICTDLVA--NYSCECPGEFMGRNCQYKGGGHH 139
Score = 72.4 bits (178), Expect = 7e-15
Identities = 32/93 (34%), Positives = 39/93 (41%), Gaps = 19/93 (20%)
Query: 631 DCDSNPCQNGGFCRSK-EGGGYRCDCPPGATGTHCELD-----------SRNECYSNPCQ 678
CD NPC+NGG C G + C+CP G T +C S C NPC
Sbjct: 2 ICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCH 61
Query: 679 HAGTCE-------DRIADYACYCLPMWNGKNCD 704
+ GTCE D Y C C +NG +C
Sbjct: 62 NGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQ 94
Score = 71.3 bits (175), Expect = 2e-14
Identities = 40/208 (19%), Positives = 59/208 (28%), Gaps = 74/208 (35%)
Query: 435 DDCAFKPCRHGGTCIDLV--NAYKCVCQVPYTGHDCHQKLDPCVPNSACVRCLTPGMIVI 492
D C PC +GG C+ + ++ C C +T +C ++
Sbjct: 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEE------------- 47
Query: 493 RSWILVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGT-----LDCVQLVNNYHCN 547
C NPC + GT Y C
Sbjct: 48 ------------------------EPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCK 83
Query: 548 CRPGYMGRHCEVKDLAVKVTSMNASPTLAPLTVLWIAYNWSTTTTATAALATWNGGVCTA 607
C G+ G HC+ + P NGG+CT
Sbjct: 84 CPRGFNGIHCQ-----HNINECEVEPCK-------------------------NGGICTD 113
Query: 608 LDGGHTCICPDNYSGRNCEYFGYDCDSN 635
L ++C CP + GRNC+Y G +
Sbjct: 114 LVANYSCECPGEFMGRNCQYKGGGHHHH 141
Score = 64.4 bits (157), Expect = 6e-12
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 20/83 (24%)
Query: 1617 QHGGICT-------DHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHN 1669
+GG C D GY C+C G+ G + C+ N+ +C C N
Sbjct: 61 HNGGTCEISEAYRGDTFIGYVCKCPRGFNGIH-------------CQHNINECEVEPCKN 107
Query: 1670 NGTCVDKVGGFECRCPPGFVGSR 1692
G C D V + C CP F+G
Sbjct: 108 GGICTDLVANYSCECPGEFMGRN 130
Score = 57.8 bits (140), Expect = 1e-09
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 865 INIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPN 911
NI++C +PC++GG C DLV Y C C + G +C K +
Sbjct: 95 HNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYKGGGHHHH 141
Score = 55.1 bits (133), Expect = 8e-09
Identities = 33/151 (21%), Positives = 44/151 (29%), Gaps = 63/151 (41%)
Query: 1394 DECGSNPCQHGGICTDHL--NGYTCECQIGYTGINCEINID------------DCAFKPC 1439
D C NPC++GGIC L ++CEC G+T NC ++ C PC
Sbjct: 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPC 60
Query: 1440 RHGGTCIDLVNAYKCVCAKAGNHRCDDECNTIACHFDGNDCSLGINPWINCTANINCWEV 1499
+GGTC D C C G
Sbjct: 61 HNGGTCEI------------SEAYRGDTFIGYVCK-----CPRG---------------- 87
Query: 1500 FMNGRCDEVCNNPQCLFDGRDCEKNLQPCNP 1530
F+G C+ N+ C
Sbjct: 88 ----------------FNGIHCQHNINECEV 102
Score = 55.1 bits (133), Expect = 9e-09
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 10/85 (11%)
Query: 1617 QHGGICTDHL--NGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCV 1674
++GGIC L ++CEC G+T S + ++ + C P CHN GTC
Sbjct: 9 ENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVAS-DEEEPTSAGPCTPNPCHNGGTCE 67
Query: 1675 -------DKVGGFECRCPPGFVGSR 1692
D G+ C+CP GF G
Sbjct: 68 ISEAYRGDTFIGYVCKCPRGFNGIH 92
Score = 37.8 bits (88), Expect = 0.008
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 1661 DCLPGACHNNGTCVDKV--GGFECRCPPGFVGSR 1692
C P C N G C+ + G F C CP GF
Sbjct: 2 ICDPNPCENGGICLPGLADGSFSCECPDGFTDPN 35
Score = 37.4 bits (87), Expect = 0.011
Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 16/54 (29%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNN 1670
++GGICTD + Y+CEC + G C+ H++
Sbjct: 106 KNGGICTDLVANYSCECPGEFMGRN-------------CQYKGGGH---HHHHH 143
Score = 32.8 bits (75), Expect = 0.47
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 1804 GSYLCECAKGYEGRDCLINTDDCAS 1828
Y+C+C +G+ G C N ++C
Sbjct: 78 IGYVCKCPRGFNGIHCQHNINECEV 102
Score = 30.1 bits (68), Expect = 3.9
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 1804 GSYLCECAKGYEGRDCLINTDDCASY 1829
+Y CEC + GR+C +
Sbjct: 116 ANYSCECPGEFMGRNCQYKGGGHHHH 141
Score = 29.3 bits (66), Expect = 6.8
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 1799 NTERNGSYLCECAKGYEGRDCLINTDDCASYLINADAD 1836
+GS+ CEC G+ +C + + A
Sbjct: 16 PGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAG 53
>3eto_A Neurogenic locus notch homolog protein 1; alpha-beta sandwich, HD
domain, LNR repeat, calcium-binding, domain,
autoinhibition, activator, T-all; 2.00A {Homo sapiens}
PDB: 3l95_X* 3i08_B 1pb5_A
Length = 242
Score = 148 bits (373), Expect = 6e-40
Identities = 77/163 (47%), Positives = 102/163 (62%), Gaps = 2/163 (1%)
Query: 1457 AKAGNHRCDDECNTIACHFDGNDCSLGIN-PWINCTANINCWEVFMNGRCDEVCNNPQCL 1515
AGN C +CN AC +DG DCSL N PW NCT ++ CW+ F +G CD CN+ CL
Sbjct: 12 EDAGNKVCSLQCNNHACGWDGGDCSLNFNDPWKNCTQSLQCWKYFSDGHCDSQCNSAGCL 71
Query: 1516 FDGRDCEKNLQPCNPIYDAYCQKHYANGHCDYSCNNAECNWDGLDC-EREPPSLADGAIS 1574
FDG DC++ CNP+YD YC+ H+++GHCD CN+AEC WDGLDC E P LA G +
Sbjct: 72 FDGFDCQRAEGQCNPLYDQYCKDHFSDGHCDQGCNSAECEWDGLDCAEHVPERLAAGTLV 131
Query: 1575 IIVLMDMQMFKQNKVSFLRELGHELRATVRIKQEPTGHEMIYQ 1617
++VLM + + + FLREL L V K++ G +MI+
Sbjct: 132 VVVLMPPEQLRNSSFHFLRELSRVLHTNVVFKRDAHGQQMIFP 174
Score = 82.5 bits (203), Expect = 3e-17
Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 737 EKCKQNNCRAKAGNHRCDDECNTIACHFDGNDCSLGIN-PWINCTANINCWEVFMNGRCD 795
E C+ C+ AGN C +CN AC +DG DCSL N PW NCT ++ CW+ F +G CD
Sbjct: 3 EACELPECQEDAGNKVCSLQCNNHACGWDGGDCSLNFNDPWKNCTQSLQCWKYFSDGHCD 62
Query: 796 EVCNNPQCLFDGRDCEKNLQPCNPIYDGR 824
CN+ CLFDG DC++ CNP+YD
Sbjct: 63 SQCNSAGCLFDGFDCQRAEGQCNPLYDQY 91
Score = 49.0 bits (116), Expect = 4e-06
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 739 CKQNNCRAKAGNHRCDDECNTIACHFDGNDCSLGINPWINCTANINCWEVFMNGRCDEVC 798
+ C + CD +CN+ C FDG DC N + C + F +G CD+ C
Sbjct: 47 TQSLQCWKYFSDGHCDSQCNSAGCLFDGFDCQ-RAEGQCNPLYDQYCKDHFSDGHCDQGC 105
Query: 799 NNPQCLFDGRDCEKNLQPCNPIYDGRLL 826
N+ +C +DG DC +++ ++
Sbjct: 106 NSAECEWDGLDCAEHVPERLAAGTLVVV 133
Score = 39.4 bits (91), Expect = 0.006
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 1694 TDAECFSNANEAADFLAASAAAHALSTTFPIYRVRGVSSAEYPP 1737
++CF +A + A FL A A+ +L+ + I V+ + PP
Sbjct: 197 ASSQCFQSATDVAAFLGALASLGSLNIPYKIEAVQSETVEPPPP 240
Score = 35.2 bits (80), Expect = 0.15
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 1536 CQKHYANGHCDYSCNNAECNWDGLDC 1561
CQ+ N C CNN C WDG DC
Sbjct: 10 CQEDAGNKVCSLQCNNHACGWDGGDC 35
>3i08_A Neurogenic locus notch homolog protein 1; SEA domain, LIN-12 notch
repeat, LNR, heterodimerization domain, HD, activator,
ANK repeat, calcium; 3.20A {Homo sapiens}
Length = 220
Score = 145 bits (367), Expect = 2e-39
Identities = 77/162 (47%), Positives = 102/162 (62%), Gaps = 2/162 (1%)
Query: 1457 AKAGNHRCDDECNTIACHFDGNDCSLGIN-PWINCTANINCWEVFMNGRCDEVCNNPQCL 1515
AGN C +CN AC +DG DCSL N PW NCT ++ CW+ F +G CD CN+ CL
Sbjct: 12 EDAGNKVCSLQCNNHACGWDGGDCSLNFNDPWKNCTQSLQCWKYFSDGHCDSQCNSAGCL 71
Query: 1516 FDGRDCEKNLQPCNPIYDAYCQKHYANGHCDYSCNNAECNWDGLDC-EREPPSLADGAIS 1574
FDG DC++ CNP+YD YC+ H+++GHCD CN+AEC WDGLDC E P LA G +
Sbjct: 72 FDGFDCQRAEGQCNPLYDQYCKDHFSDGHCDQGCNSAECEWDGLDCAEHVPERLAAGTLV 131
Query: 1575 IIVLMDMQMFKQNKVSFLRELGHELRATVRIKQEPTGHEMIY 1616
++VLM + + + FLREL L V K++ G +MI+
Sbjct: 132 VVVLMPPEQLRNSSFHFLRELSRVLHTNVVFKRDAHGQQMIF 173
Score = 81.8 bits (201), Expect = 3e-17
Identities = 43/87 (49%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 737 EKCKQNNCRAKAGNHRCDDECNTIACHFDGNDCSLGIN-PWINCTANINCWEVFMNGRCD 795
E C+ C+ AGN C +CN AC +DG DCSL N PW NCT ++ CW+ F +G CD
Sbjct: 3 EACELPECQEDAGNKVCSLQCNNHACGWDGGDCSLNFNDPWKNCTQSLQCWKYFSDGHCD 62
Query: 796 EVCNNPQCLFDGRDCEKNLQPCNPIYD 822
CN+ CLFDG DC++ CNP+YD
Sbjct: 63 SQCNSAGCLFDGFDCQRAEGQCNPLYD 89
Score = 46.8 bits (110), Expect = 2e-05
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 739 CKQNNCRAKAGNHRCDDECNTIACHFDGNDCSLGINPWINCTANINCWEVFMNGRCDEVC 798
+ C + CD +CN+ C FDG DC N + C + F +G CD+ C
Sbjct: 47 TQSLQCWKYFSDGHCDSQCNSAGCLFDGFDCQRAEGQ-CNPLYDQYCKDHFSDGHCDQGC 105
Query: 799 NNPQCLFDGRDCEKNLQPC 817
N+ +C +DG DC +++
Sbjct: 106 NSAECEWDGLDCAEHVPER 124
Score = 34.8 bits (79), Expect = 0.19
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 1536 CQKHYANGHCDYSCNNAECNWDGLDC 1561
CQ+ N C CNN C WDG DC
Sbjct: 10 CQEDAGNKVCSLQCNNHACGWDGGDC 35
Score = 31.0 bits (69), Expect = 3.0
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 739 CKQNNCRAKAGNHRCDDECNTIACHFDGNDCSLGINPWI 777
C+ + CD CN+ C +DG DC+ + +
Sbjct: 87 LYDQYCKDHFSDGHCDQGCNSAECEWDGLDCAEHVPERL 125
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain,
blood coagulation, polymorphism, glycoprotein,
hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B*
1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B*
1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B*
2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Length = 134
Score = 140 bits (356), Expect = 6e-39
Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 1/124 (0%)
Query: 1059 PCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPG 1118
C + + + + ++CE+ PCQN G C D G + C C+ G
Sbjct: 11 ECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEG 70
Query: 1119 FTGTQCETDIDE-CASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNG 1177
F G CE + C+ + C++ N+ C+C G+T + PC
Sbjct: 71 FEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQ 130
Query: 1178 GICK 1181
+ +
Sbjct: 131 TLER 134
Score = 139 bits (353), Expect = 2e-38
Identities = 24/122 (19%), Positives = 38/122 (31%), Gaps = 1/122 (0%)
Query: 1095 SHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACP 1154
C + ++ D D+C ++PC N G C D + + C C
Sbjct: 9 ERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCL 68
Query: 1155 IGFTGSHCQINIDD-CVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCH 1213
GF G +C++ C C + C C G+T PC
Sbjct: 69 EGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCG 128
Query: 1214 RG 1215
+
Sbjct: 129 KQ 130
Score = 139 bits (353), Expect = 2e-38
Identities = 28/128 (21%), Positives = 41/128 (32%), Gaps = 5/128 (3%)
Query: 1205 NDCASNPCHRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQC 1264
+C C + D+C ++PCQ G+C+D + Y C
Sbjct: 10 RECMEETC----SYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTC 65
Query: 1265 RCKPGTSGTNCEININE-CYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASN 1323
C G G NCE+ + C + C + N C C GYT
Sbjct: 66 TCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPY 125
Query: 1324 PCANGGVC 1331
PC +
Sbjct: 126 PCGKQTLE 133
Score = 137 bits (346), Expect = 2e-37
Identities = 29/125 (23%), Positives = 42/125 (33%), Gaps = 1/125 (0%)
Query: 1322 SNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCK 1381
C + + + D D+C + PC N G C+DGL ++ C C
Sbjct: 9 ERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCL 68
Query: 1382 PGYGGKRCEFDIDE-CGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKPCR 1440
G+ GK CE + C + C + N C C GYT + PC
Sbjct: 69 EGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCG 128
Query: 1441 HGGTC 1445
Sbjct: 129 KQTLE 133
Score = 136 bits (345), Expect = 2e-37
Identities = 28/125 (22%), Positives = 44/125 (35%), Gaps = 1/125 (0%)
Query: 1246 SNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECL 1305
C + N + ++C ++PC+N KC DG+ Y+C CL
Sbjct: 9 ERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCL 68
Query: 1306 PGYTGLHCETNINE-CASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCL 1364
G+ G +CE + C+ + C + + C C RGY A PC
Sbjct: 69 EGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCG 128
Query: 1365 NGGTC 1369
Sbjct: 129 KQTLE 133
Score = 132 bits (334), Expect = 7e-36
Identities = 34/163 (20%), Positives = 55/163 (33%), Gaps = 31/163 (19%)
Query: 943 EDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEV 1002
E++ + L C + + K E + + D C + PCQN G C D +
Sbjct: 1 EEMKKGHLERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGL 60
Query: 1003 GDYSCLCVDGFSGKHCEVDIDE-CSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCE 1061
G+Y+C C++GF GK+CE+ + CS +
Sbjct: 61 GEYTCTCLEGFEGKNCELFTRKLCSLDNGDCD---------------------------- 92
Query: 1062 HDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSC 1104
C S C+C +G+T +PC
Sbjct: 93 --QFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLE 133
Score = 119 bits (301), Expect = 2e-31
Identities = 22/126 (17%), Positives = 38/126 (30%), Gaps = 2/126 (1%)
Query: 873 KPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQDFACHC 932
+ C + + ++ D C + CQ+ +C ++ C C
Sbjct: 10 RECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLG--EYTCTC 67
Query: 933 GVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPC 992
G+ G+ C + CH S +C CA+GY D +PC
Sbjct: 68 LEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPC 127
Query: 993 QNGGTC 998
Sbjct: 128 GKQTLE 133
Score = 116 bits (292), Expect = 3e-30
Identities = 27/126 (21%), Positives = 40/126 (31%), Gaps = 4/126 (3%)
Query: 155 PCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCE 214
C + + + + ++CE+ PCQN G C D G + C C
Sbjct: 11 ECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCT--CL 68
Query: 215 PGYTGQNCE-SKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLC 273
G+ G+NCE C C E N + C C GY + + C
Sbjct: 69 EGFEGKNCELFTRKLCSLDNGDCDQFCHEEQN-SVVCSCARGYTLADNGKACIPTGPYPC 127
Query: 274 QNGATC 279
Sbjct: 128 GKQTLE 133
Score = 113 bits (286), Expect = 2e-29
Identities = 27/126 (21%), Positives = 38/126 (30%), Gaps = 4/126 (3%)
Query: 233 PCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLA 292
C E + N ++ D C + CQN C DG+ +Y+C CL
Sbjct: 11 ECMEETCSYEEAR-EVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLE 69
Query: 293 TYTGDLCEQDVDE-CSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAAC 351
+ G CE + CS+ C C C G+T D C
Sbjct: 70 GFEGKNCELFTRKLCSLDN--GDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPC 127
Query: 352 FNGATC 357
Sbjct: 128 GKQTLE 133
Score = 113 bits (285), Expect = 2e-29
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Query: 1360 SDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQ 1419
C+ + + D D+C ++PCQ+ G C D L YTC C
Sbjct: 9 ERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCL 68
Query: 1420 IGYTGINCEINIDD-CAFKPCRHGGTCIDLVNAYKCVCA 1457
G+ G NCE+ C+ C + N+ C CA
Sbjct: 69 EGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCA 107
Score = 111 bits (279), Expect = 2e-28
Identities = 28/130 (21%), Positives = 39/130 (30%), Gaps = 6/130 (4%)
Query: 191 SHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYEC 250
C + ++ + N C+ SPCQN G C++ Y C
Sbjct: 9 ERECMEETCSYEEAREVFED--SDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLG-EYTC 65
Query: 251 ECQSGYRGKNCEENIDD-CPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIR 309
C G+ GKNCE C + C + N C C YT +
Sbjct: 66 TCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTG-- 123
Query: 310 PSVCHNGATC 319
P C
Sbjct: 124 PYPCGKQTLE 133
Score = 109 bits (275), Expect = 6e-28
Identities = 27/131 (20%), Positives = 42/131 (32%), Gaps = 7/131 (5%)
Query: 269 PGNL---CQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGG 325
G+L C + + T +D D+C P C N C + +G
Sbjct: 5 KGHLERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSP--CQNQGKCKDGLGE 62
Query: 326 FSCICVNGWTGPDCSLNIDD-CAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLE-DAC 383
++C C+ G+ G +C L C+ C + S C C G T
Sbjct: 63 YTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPT 122
Query: 384 TSNPCHADAIC 394
PC +
Sbjct: 123 GPYPCGKQTLE 133
Score = 109 bits (274), Expect = 9e-28
Identities = 31/170 (18%), Positives = 47/170 (27%), Gaps = 38/170 (22%)
Query: 73 ELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGECFNTHGS 132
E++ C D +D +C
Sbjct: 2 EMKKGHLERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQC---------------- 45
Query: 133 YTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNE-CES 191
SPC++ G C + G + C C +GF G CE + C
Sbjct: 46 -------------------ETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSL 86
Query: 192 HPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCR 241
D C ++ + C C GYT + +P P PC + R
Sbjct: 87 DNGDCDQFCHEEQNSVVCSCA--RGYTLADNGKACIPTGPYPCGKQTLER 134
Score = 103 bits (260), Expect = 6e-26
Identities = 25/158 (15%), Positives = 36/158 (22%), Gaps = 36/158 (22%)
Query: 44 PCMNGGTCTLKSLDRYTCTCAPGFTGSQCELQ-DHCASSPCRNGAVCTSLEDTYECDCAP 102
CM + D C +SPC+N C Y C C
Sbjct: 11 ECMEETCSY-EEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLE 69
Query: 103 GFVGQTCSEDIIECVDDPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTC 162
GF G+ C + + + D C
Sbjct: 70 GFEGKNCELFTRKLC----------------------------------SLDNGDCDQFC 95
Query: 163 VNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSC 200
S C+C +G+T +PC
Sbjct: 96 HEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLE 133
Score = 98.9 bits (247), Expect = 3e-24
Identities = 26/138 (18%), Positives = 34/138 (24%), Gaps = 18/138 (13%)
Query: 313 CHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGK 372
C + + D C + C N C D +G + C C G
Sbjct: 12 CMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGF 71
Query: 373 TGLLCHLE--DACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINC 430
G C L C+ + D C S CSCA GY +
Sbjct: 72 EGKNCELFTRKLCSLDNGDCDQFCHEEQ---NSVVCSCARGYTLA-------------DN 115
Query: 431 EINIDDCAFKPCRHGGTC 448
PC
Sbjct: 116 GKACIPTGPYPCGKQTLE 133
Score = 95.0 bits (237), Expect = 8e-23
Identities = 25/129 (19%), Positives = 39/129 (30%), Gaps = 16/129 (12%)
Query: 351 CFNGATCIDRVGSFYCQCTPGKTGLLCHLE-DACTSNPCHADAICDTNPIINGSYTCSCA 409
C + + + + D C ++PC C G YTC+C
Sbjct: 12 CMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGL---GEYTCTCL 68
Query: 410 SGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCH 469
G++G NC + C+ C + N+ C C YT D
Sbjct: 69 EGFEGKNCELFTRKL------------CSLDNGDCDQFCHEEQNSVVCSCARGYTLADNG 116
Query: 470 QKLDPCVPN 478
+ P P
Sbjct: 117 KACIPTGPY 125
Score = 94.3 bits (235), Expect = 1e-22
Identities = 28/123 (22%), Positives = 39/123 (31%), Gaps = 9/123 (7%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYT 60
C + + C++ PC N G C L YT
Sbjct: 12 CMEETCSYEEAR-----EVFEDSDKTNEFWNKYKDG-DQCETSPCQNQGKCK-DGLGEYT 64
Query: 61 CTCAPGFTGSQCEL--QDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVD 118
CTC GF G CEL + C+ C +++ C CA G+ + I
Sbjct: 65 CTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGP 124
Query: 119 DPC 121
PC
Sbjct: 125 YPC 127
Score = 89.7 bits (223), Expect = 5e-21
Identities = 23/104 (22%), Positives = 33/104 (31%), Gaps = 1/104 (0%)
Query: 601 NGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGAT 660
N G C+++PCQN G C+ G Y C C G
Sbjct: 14 EETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDG-LGEYTCTCLEGFE 72
Query: 661 GTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCD 704
G +CEL +R C + C + C C + +
Sbjct: 73 GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNG 116
Score = 77.3 bits (191), Expect = 1e-16
Identities = 26/161 (16%), Positives = 34/161 (21%), Gaps = 35/161 (21%)
Query: 524 CLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAPLTVLWI 583
L C + + + SP
Sbjct: 7 HLERECMEETC--SYEEAREVFEDSDKTNEFWNKYKD-----GDQCETSPCQ-------- 51
Query: 584 AYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYD-CDSNPCQNGGF 642
N G C G +TC C + + G+NCE F C + F
Sbjct: 52 -----------------NQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQF 94
Query: 643 CRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTC 683
C E C C G T PC
Sbjct: 95 CHE-EQNSVVCSCARGYTLADNGKAC-IPTGPYPCGKQTLE 133
Score = 70.0 bits (172), Expect = 5e-14
Identities = 21/131 (16%), Positives = 33/131 (25%), Gaps = 31/131 (23%)
Query: 514 GSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASP 573
D ++C ++PC + G C + Y C C G+ G++CE
Sbjct: 35 FWNKYKDGDQCETSPCQNQGK--CKDGLGEYTCTCLEGFEGKNCE--------LFTRKLC 84
Query: 574 TLAPLTVLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCD 633
+L C C C Y+ +
Sbjct: 85 SLDN---------------------GDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTG 123
Query: 634 SNPCQNGGFCR 644
PC R
Sbjct: 124 PYPCGKQTLER 134
Score = 69.2 bits (170), Expect = 9e-14
Identities = 26/184 (14%), Positives = 39/184 (21%), Gaps = 73/184 (39%)
Query: 377 CHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDD 436
HLE C C + + + N + D
Sbjct: 6 GHLERECMEETCSYEEARE--------VFEDSDKTN-------------EFWNKYKDGDQ 44
Query: 437 CAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVRCLTPGMIVIRSWI 496
C PC++ G C D + Y C C +
Sbjct: 45 CETSPCQNQGKCKDGLGEYTCTCLEGFE-------------------------------- 72
Query: 497 LVYRTERMVIDFGMKHIGSRCEGDINE-CLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGR 555
G CE + C + C + N+ C+C GY
Sbjct: 73 -----------------GKNCELFTRKLCSLDNGDCDQF--CHEEQNSVVCSCARGYTLA 113
Query: 556 HCEV 559
Sbjct: 114 DNGK 117
Score = 64.6 bits (158), Expect = 3e-12
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 634 SNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADYACY 693
C E D + D ++C ++PCQ+ G C+D + +Y C
Sbjct: 9 ERECMEETCSYE-EAREVFEDSDKTNEFWNKYKD-GDQCETSPCQNQGKCKDGLGEYTCT 66
Query: 694 CLPMWNGKNCDL 705
CL + GKNC+L
Sbjct: 67 CLEGFEGKNCEL 78
Score = 58.8 bits (143), Expect = 4e-10
Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 14/77 (18%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPD-CLPGACHNNGTCVD 1675
Q+ G C D L YTC C G+ G CE+ C + C +
Sbjct: 51 QNQGKCKDGLGEYTCTCLEGFEGKN-------------CELFTRKLCSLDNGDCDQFCHE 97
Query: 1676 KVGGFECRCPPGFVGSR 1692
+ C C G+ +
Sbjct: 98 EQNSVVCSCARGYTLAD 114
Score = 55.0 bits (133), Expect = 9e-09
Identities = 11/52 (21%), Positives = 15/52 (28%)
Query: 868 DDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARC 919
C+ C + N+ C C YT D + P P C
Sbjct: 82 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLE 133
Score = 52.3 bits (126), Expect = 7e-08
Identities = 12/76 (15%), Positives = 17/76 (22%), Gaps = 13/76 (17%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
+ + + C C N G C D
Sbjct: 13 MEETCSYEEAREVFEDSDKTNEFWN-------------KYKDGDQCETSPCQNQGKCKDG 59
Query: 1677 VGGFECRCPPGFVGSR 1692
+G + C C GF G
Sbjct: 60 LGEYTCTCLEGFEGKN 75
Score = 41.9 bits (99), Expect = 2e-04
Identities = 9/57 (15%), Positives = 10/57 (17%), Gaps = 13/57 (22%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTC 1673
C + N C C GYT P C
Sbjct: 90 DCDQFCHEEQNSVVCSCARGYTLAD-------------NGKACIPTGPYPCGKQTLE 133
Score = 38.8 bits (91), Expect = 0.003
Identities = 9/51 (17%), Positives = 15/51 (29%), Gaps = 6/51 (11%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTC 51
C+ Q+ S CSC G++ + +PC
Sbjct: 89 GDCDQFCHEEQN-----SVVCSCARGYTLADNGKAC-IPTGPYPCGKQTLE 133
Score = 30.3 bits (69), Expect = 2.3
Identities = 9/30 (30%), Positives = 11/30 (36%)
Query: 1800 TERNGSYLCECAKGYEGRDCLINTDDCASY 1829
E S +C CA+GY D Y
Sbjct: 96 HEEQNSVVCSCARGYTLADNGKACIPTGPY 125
Score = 28.8 bits (65), Expect = 9.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 1804 GSYLCECAKGYEGRDCLINTDDCAS 1828
G Y C C +G+EG++C + T S
Sbjct: 61 GEYTCTCLEGFEGKNCELFTRKLCS 85
>2oo4_A Notch 2, neurogenic locus notch homolog protein 2, HN2, notch2,
NOTC2; alpha-beta-sandwich, SEA domain, LNR, LIN12 notch
repeat, CY rich, HD domain; 2.00A {Homo sapiens}
Length = 234
Score = 143 bits (361), Expect = 2e-38
Identities = 93/298 (31%), Positives = 135/298 (45%), Gaps = 67/298 (22%)
Query: 1442 GGTCIDLVNAYKCVCAKAGNHRCDDECNTIACHFDGNDCSLGI-NPWINCTANINCWEVF 1500
G TC+ + KA + CD+ CN+ AC +DG DCSL + NPW NC++ + CW+ +
Sbjct: 1 GATCLS-----QYCADKARDGVCDEACNSHACQWDGGDCSLTMENPWANCSSPLPCWD-Y 54
Query: 1501 MNGRCDEVCNNPQCLFDGRDCEKNLQPCNPIYDAYCQKHYANGHCDYSCNNAECNWDGLD 1560
+N +CDE+CN +CLFD +C+ N + C YD YC H+ + HC+ CN+ EC WDGLD
Sbjct: 55 INNQCDELCNTVECLFDNFECQGNSKTCK--YDKYCADHFKDNHCNQGCNSEECGWDGLD 112
Query: 1561 CERE-PPSLADGAISIIVLMDMQMFKQNKVSFLRELGHELRATVRIKQEPTGHEMIYQHG 1619
C + P +LA+G + I+VLM + Q+ SFLR LG L +RIK++ G M+Y +
Sbjct: 113 CAADQPENLAEGTLVIVVLMPPEQLLQDARSFLRALGTLLHTNLRIKRDSQGELMVYPYY 172
Query: 1620 GICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDKVGG 1679
G G + L + C + C
Sbjct: 173 G---------------EVAGSKVFLEIDNRQ----CVQDSDHC----------------- 196
Query: 1680 FECRCPPGFVGSRWTDAECFSNANEAADFLAASAAAHALSTTFPIYRVRGVSSAEYPP 1737
F N + AA LA+ A LS +P+ V S
Sbjct: 197 -------------------FKNTDAAAALLASHAIQGTLS--YPLVSVVSESLTPERT 233
Score = 75.6 bits (185), Expect = 6e-15
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 739 CKQNNCRAKAGNHRCDDECNTIACHFDGNDCSLGI-NPWINCTANINCWEVFMNGRCDEV 797
C C KA + CD+ CN+ AC +DG DCSL + NPW NC++ + CW+ ++N +CDE+
Sbjct: 4 CLSQYCADKARDGVCDEACNSHACQWDGGDCSLTMENPWANCSSPLPCWD-YINNQCDEL 62
Query: 798 CNNPQCLFDGRDCEKNLQPCN 818
CN +CLFD +C+ N + C
Sbjct: 63 CNTVECLFDNFECQGNSKTCK 83
Score = 51.7 bits (123), Expect = 5e-07
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 733 EKEMEKCKQNNCRAKAGNHRCDDECNTIACHFDGNDCSLGINPWINCTANINCWEVFMNG 792
E C N++CD+ CNT+ C FD +C C + C + F +
Sbjct: 39 ENPWANCSSPLPCWDYINNQCDELCNTVECLFDNFECQGNSKT---CKYDKYCADHFKDN 95
Query: 793 RCDEVCNNPQCLFDGRDCEKNLQPC 817
C++ CN+ +C +DG DC +
Sbjct: 96 HCNQGCNSEECGWDGLDCAADQPEN 120
Score = 30.5 bits (68), Expect = 4.8
Identities = 16/82 (19%), Positives = 24/82 (29%), Gaps = 3/82 (3%)
Query: 614 CICPDNYSGRNCEYFGYDCDSNPCQNGGFCRS--KEGGGYRCDCPPGATGTHCELDSRNE 671
+C + + C++ G DC C S C C D+
Sbjct: 16 GVCDEACNSHACQWDGGDCSLTMENPWANCSSPLPCWDYINNQCDELCNTVECLFDNFEC 75
Query: 672 C-YSNPCQHAGTCEDRIADYAC 692
S C++ C D D C
Sbjct: 76 QGNSKTCKYDKYCADHFKDNHC 97
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular,
developmental protein, notch signaling pathway, EGF, DSL,
notch, calcium, membrane; 2.50A {Homo sapiens} PDB:
2kb9_A
Length = 169
Score = 138 bits (349), Expect = 2e-37
Identities = 49/188 (26%), Positives = 70/188 (37%), Gaps = 22/188 (11%)
Query: 1244 CASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCE 1303
S+ G E C G C C G D +
Sbjct: 2 RGSHHHHHHGSIE---GRSAVTCDDYYYGFGCN---KFCRPRDDFFGHYACDQNG--NKT 53
Query: 1304 CLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPC 1363
C+ G+ G C I C G C C C G+ C D+C P
Sbjct: 54 CMEGWMGPECNRAI--CRQGCSPKHGSCKL---PGDCRCQYGWQGLYC----DKCIPHPG 104
Query: 1364 LNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSN-PCQHGGICTDH-LNGYTCECQIG 1421
G C + + C C+ +GG+ C+ D++ CG++ PC +GG C++ + Y C C G
Sbjct: 105 CVHGICNEP---WQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEG 161
Query: 1422 YTGINCEI 1429
Y+G NCEI
Sbjct: 162 YSGPNCEI 169
Score = 122 bits (309), Expect = 4e-32
Identities = 50/217 (23%), Positives = 75/217 (34%), Gaps = 52/217 (23%)
Query: 987 CASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFF 1046
S + G+ G + C D + G C C G
Sbjct: 2 RGSHHHHHHGSI---EGRSAVTCDDYYYGFGCN---KFCRPRDDFFGHYA---------- 45
Query: 1047 TNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLD 1106
C+ +G C +G+ GP C + C GSC
Sbjct: 46 -------------CDQNGNKT---------CMEGWMGPECNRAI--CRQGCSPKHGSCKL 81
Query: 1107 DPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINI 1166
C C G+ G C D+C +P GICN+ ++C C + G C ++
Sbjct: 82 P---GDCRCQYGWQGLYC----DKCIPHPGCVHGICNE---PWQCLCETNWGGQLCDKDL 131
Query: 1167 DDCVS-SPCHNGGICKDS-IAGYTCECLAGFTGMSCE 1201
+ C + PC NGG C ++ Y C C G++G +CE
Sbjct: 132 NYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCE 168
Score = 122 bits (308), Expect = 7e-32
Identities = 43/185 (23%), Positives = 64/185 (34%), Gaps = 21/185 (11%)
Query: 1169 CVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRGECIDGENSFTCAC 1228
S H+ G + C + G C + D C
Sbjct: 2 RGSHHHHHHGSIEGR---SAVTCDDYYYGFGCNKFC--RPRDDFFGHYACDQNG--NKTC 54
Query: 1229 HPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCR 1288
G+ G CN C G C+ CRC+ G G C ++C +P
Sbjct: 55 MEGWMGPECNR--AICRQGCSPKHGSCKL---PGDCRCQYGWQGLYC----DKCIPHPGC 105
Query: 1289 NGAKCVDGINRYSCECLPGYTGLHCETNINECASN-PCANGGVCVDL-IDGFKCECPRGY 1346
C + + C C + G C+ ++N C ++ PC NGG C + D ++C CP GY
Sbjct: 106 VHGICNEP---WQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGY 162
Query: 1347 YDARC 1351
C
Sbjct: 163 SGPNC 167
Score = 120 bits (304), Expect = 2e-31
Identities = 40/178 (22%), Positives = 64/178 (35%), Gaps = 22/178 (12%)
Query: 1282 CYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCE 1341
S+ + R + C Y G C C G D
Sbjct: 2 RGSHHHHHHGSIE---GRSAVTCDDYYYGFGCNK---FCRPRDDFFGHYACD--QNGNKT 53
Query: 1342 CPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPC 1401
C G+ C + C G+C+ C C+ G+ G C D+C +P
Sbjct: 54 CMEGWMGPEC--NRAICRQGCSPKHGSCKLP---GDCRCQYGWQGLYC----DKCIPHPG 104
Query: 1402 QHGGICTDHLNGYTCECQIGYTGINCEINIDDCA-FKPCRHGGTCIDL-VNAYKCVCA 1457
GIC + + C C+ + G C+ +++ C +PC +GGTC + + Y+C C
Sbjct: 105 CVHGICNE---PWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCP 159
Score = 117 bits (296), Expect = 2e-30
Identities = 48/216 (22%), Positives = 81/216 (37%), Gaps = 52/216 (24%)
Query: 951 SSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEVGDYSCLCV 1010
S + + G C Y G C C G D+ + + C+
Sbjct: 4 SHHHHHHGSI---EGRSAVTCDDYYYGFGC---NKFCRPRDDFFGHYACDQ--NGNKTCM 55
Query: 1011 DGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTP 1070
+G+ G C I +P H G+C
Sbjct: 56 EGWMGPECNRAICRQGCSPKH--------------------------------GSCKL-- 81
Query: 1071 GSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDE 1130
C C G+ G C ++C HP G C + ++C+C + G C+ D++
Sbjct: 82 -PGDCRCQYGWQGLYC----DKCIPHPGCVHGICNEP---WQCLCETNWGGQLCDKDLNY 133
Query: 1131 CASN-PCLNGGICNDL-INTFKCACPIGFTGSHCQI 1164
C ++ PCLNGG C++ + ++C+CP G++G +C+I
Sbjct: 134 CGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEI 169
Score = 117 bits (295), Expect = 3e-30
Identities = 46/189 (24%), Positives = 68/189 (35%), Gaps = 25/189 (13%)
Query: 154 SPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMC 213
H G+ G A C + G C C D G C
Sbjct: 5 HHHHHHGSIE---GRSAVTCDDYYYGFGCNK---FCRPRDDFFGHYACDQNGN----KTC 54
Query: 214 EPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLC 273
G+ G C C G C+ +C CQ G++G C D C +
Sbjct: 55 MEGWMGPECNRA--ICRQGCSPKHGSCKL----PGDCRCQYGWQGLYC----DKCIPHPG 104
Query: 274 QNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNS-VGGFSCICVN 332
C + + CLC + G LC++D++ C C NG TC+N+ + C C
Sbjct: 105 CVHGICNEP---WQCLCETNWGGQLCDKDLNYCG-THQPCLNGGTCSNTGPDKYQCSCPE 160
Query: 333 GWTGPDCSL 341
G++GP+C +
Sbjct: 161 GYSGPNCEI 169
Score = 110 bits (278), Expect = 6e-28
Identities = 41/193 (21%), Positives = 59/193 (30%), Gaps = 27/193 (13%)
Query: 189 CESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNY 248
SH + GS R C+ Y G C C P G + N
Sbjct: 2 RGSHHHHHHGSI-----EGRSAVTCDDYYYGFGCN---KFCRPRDDFFGHYAC---DQNG 50
Query: 249 ECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSI 308
C G+ G C I C +C C C + G C++ +
Sbjct: 51 NKTCMEGWMGPECNRAI--CRQGCSPKHGSCKLP---GDCRCQYGWQGLYCDKCIPHP-- 103
Query: 309 RPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAA-CFNGATCIDR-VGSFYC 366
C + C+C W G C +++ C C NG TC + + C
Sbjct: 104 ----GCVHGICNE---PWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQC 156
Query: 367 QCTPGKTGLLCHL 379
C G +G C +
Sbjct: 157 SCPEGYSGPNCEI 169
Score = 108 bits (273), Expect = 3e-27
Identities = 49/219 (22%), Positives = 72/219 (32%), Gaps = 53/219 (24%)
Query: 870 CAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQDFA 929
H G+ C Y G C++ C P G Q+
Sbjct: 2 RGSHHHHHHGSI---EGRSAVTCDDYYYGFGCNK---FCRPRDDFFGHYACD----QNGN 51
Query: 930 CHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCAS 989
C GW G CN + +C C C G++G C D C
Sbjct: 52 KTCMEGWMGPECNRAICRQ---GCSPKHGSCKL---PGDCRCQYGWQGLYC----DKCIP 101
Query: 990 FPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQ 1049
P G C + + CLC + G+ C+ D++ C ++
Sbjct: 102 HPGCVHGICNE---PWQCLCETNWGGQLCDKDLNYCGTH--------------------- 137
Query: 1050 YSWFLIAGSPCEHDGTCVNT-PGSFACNCTQGFTGPRCE 1087
PC + GTC NT P + C+C +G++GP CE
Sbjct: 138 --------QPCLNGGTCSNTGPDKYQCSCPEGYSGPNCE 168
Score = 106 bits (267), Expect = 2e-26
Identities = 48/224 (21%), Positives = 63/224 (28%), Gaps = 58/224 (25%)
Query: 40 CDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTYECD 99
S + G+ R TC + G C C G
Sbjct: 2 RGSHHHHHHGSIE----GRSAVTCDDYYYGFGCN--KFCRPRDDFFGHYACD--QNGNKT 53
Query: 100 CAPGFVGQTCSEDIIECVDDPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHD 159
C G++G C+ I
Sbjct: 54 CMEGWMGPECNRAICRQ-------------------------------------GCSPKH 76
Query: 160 GTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTG 219
G+C C C G+ G C ++C HP G C + C+CE + G
Sbjct: 77 GSCKL---PGDCRCQYGWQGLYC----DKCIPHPGCVHGICNEPW-----QCLCETNWGG 124
Query: 220 QNCESKYVPCD-PSPCQNGGVCRELDNLNYECECQSGYRGKNCE 262
Q C+ C PC NGG C Y+C C GY G NCE
Sbjct: 125 QLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCE 168
Score = 105 bits (263), Expect = 7e-26
Identities = 45/225 (20%), Positives = 72/225 (32%), Gaps = 60/225 (26%)
Query: 78 CASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGECFNTHGSYTFQM 137
S + E C + G C++
Sbjct: 2 RGSHHHHHHGSI---EGRSAVTCDDYYYGFGCNKFCRPR--------------------- 37
Query: 138 IFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQND 197
+ G+ C +G+ GP C + C
Sbjct: 38 -----------------DDFFGHYACDQNGN--KTCMEGWMGPECNRAI--CRQGCSPKH 76
Query: 198 GSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYR 257
GSC C C+ G+ G C+ C P P G+C E ++C C++ +
Sbjct: 77 GSCKLPG-----DCRCQYGWQGLYCD----KCIPHPGCVHGICNE----PWQCLCETNWG 123
Query: 258 GKNCEENIDDC-PGNLCQNGATCMD-GINKYSCLCLATYTGDLCE 300
G+ C+++++ C C NG TC + G +KY C C Y+G CE
Sbjct: 124 GQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCE 168
Score = 102 bits (257), Expect = 4e-25
Identities = 48/202 (23%), Positives = 73/202 (36%), Gaps = 37/202 (18%)
Query: 268 CPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFS 327
+ + + + + C Y G C + RP G + G +
Sbjct: 2 RGSHHHHHHGSI---EGRSAVTCDDYYYGFGCNKF-----CRPRDDFFGHYACDQNG--N 51
Query: 328 CICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNP 387
C+ GW GP+C N C +C C+C G GL C D C +P
Sbjct: 52 KTCMEGWMGPEC--NRAICRQGCSPKHGSCKL---PGDCRCQYGWQGLYC---DKCIPHP 103
Query: 388 CHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGT 447
IC N + C C + + G C +D+N C +PC +GGT
Sbjct: 104 GCVHGIC------NEPWQCLCETNWGGQLCDKDLNYCGTH------------QPCLNGGT 145
Query: 448 CIDL-VNAYKCVCQVPYTGHDC 468
C + + Y+C C Y+G +C
Sbjct: 146 CSNTGPDKYQCSCPEGYSGPNC 167
Score = 95.9 bits (239), Expect = 1e-22
Identities = 42/225 (18%), Positives = 64/225 (28%), Gaps = 65/225 (28%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYT 60
+ G+ +C + C C G
Sbjct: 7 HHHHGSIE--------GRSAVTCDDYYYGFGCN----KFCRPRDDFFGHYAC---DQNGN 51
Query: 61 CTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDP 120
TC G+ G +C + C C +C C G+ G C +C+ P
Sbjct: 52 KTCMEGWMGPECN-RAICRQGCSPKHGSCK---LPGDCRCQYGWQGLYCD----KCIPHP 103
Query: 121 CVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGP 180
G C + C C + G
Sbjct: 104 GCVH-----------------------------------GICNE---PWQCLCETNWGGQ 125
Query: 181 RCETNVNECESH-PCQNDGSCLD-DPGTFRCVCMCEPGYTGQNCE 223
C+ ++N C +H PC N G+C + P ++C C GY+G NCE
Sbjct: 126 LCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCS--CPEGYSGPNCE 168
Score = 93.6 bits (233), Expect = 7e-22
Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 19/155 (12%)
Query: 868 DDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQD 927
C + G D C + G +C++ C C
Sbjct: 32 KFCRPRDDFFGHYACDQNG--NKTCMEGWMGPECNR--AICRQGCSPKHGSCK-----LP 82
Query: 928 FACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDC 987
C C GW G YC++ + P C+ + C C + G+ C + + C
Sbjct: 83 GDCRCQYGWQGLYCDKCI-----PHPGCVHGICNE---PWQCLCETNWGGQLCDKDLNYC 134
Query: 988 ASF-PCQNGGTCLD-EVGDYSCLCVDGFSGKHCEV 1020
+ PC NGGTC + Y C C +G+SG +CE+
Sbjct: 135 GTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEI 169
Score = 81.3 bits (201), Expect = 1e-17
Identities = 35/116 (30%), Positives = 48/116 (41%), Gaps = 13/116 (11%)
Query: 866 NIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANF 925
N C G+C C CQ + G C D C+P+ C
Sbjct: 64 NRAICRQGCSPKHGSCKL---PGDCRCQYGWQGLYC----DKCIPHPGCVHGICN----- 111
Query: 926 QDFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTN-GSYLCECAKGYEGRDC 980
+ + C C W G+ C++D++ C PC NG TC NT Y C C +GY G +C
Sbjct: 112 EPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNC 167
Score = 75.9 bits (187), Expect = 9e-16
Identities = 44/251 (17%), Positives = 70/251 (27%), Gaps = 86/251 (34%)
Query: 310 PSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCT 369
H+ + + C + + G C+ C F G D+ G+ C
Sbjct: 4 SHHHHHHGSIEGR---SAVTCDDYYYGFGCN---KFCRPRDDFFGHYACDQNGN--KTCM 55
Query: 370 PGKTGLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGIN 429
G G C+ C C C C G++G+ C
Sbjct: 56 EGWMGPECN-RAICRQGCSPKHGSCKL------PGDCRCQYGWQGLYC------------ 96
Query: 430 CEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVRCLTPGM 489
D C P G C + ++C+C+ + G C + L+ C +
Sbjct: 97 -----DKCIPHPGCVHGICNE---PWQCLCETNWGGQLCDKDLNYCGTH----------- 137
Query: 490 IVIRSWILVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQL-VNNYHCNC 548
PC + GT C + Y C+C
Sbjct: 138 -------------------------------------QPCLNGGT--CSNTGPDKYQCSC 158
Query: 549 RPGYMGRHCEV 559
GY G +CE+
Sbjct: 159 PEGYSGPNCEI 169
Score = 72.0 bits (177), Expect = 2e-14
Identities = 34/186 (18%), Positives = 51/186 (27%), Gaps = 22/186 (11%)
Query: 524 CLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAPLTVLWI 583
S+ HG+++ C Y G C
Sbjct: 2 RGSHHHHHHGSIE-----GRSAVTCDDYYYGFGCN--KFCRPRDDFFGHYACDQNGNKTC 54
Query: 584 AYNWSTTTTAT---AALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNG 640
W + G C C C + G C+ C +P
Sbjct: 55 MEGWMGPECNRAICRQGCSPKHGSCKL---PGDCRCQYGWQGLYCD----KCIPHPGCVH 107
Query: 641 GFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDR-IADYACYCLPMWN 699
G C ++C C G C+ D PC + GTC + Y C C ++
Sbjct: 108 GICN----EPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYS 163
Query: 700 GKNCDL 705
G NC++
Sbjct: 164 GPNCEI 169
Score = 68.9 bits (169), Expect = 2e-13
Identities = 43/231 (18%), Positives = 64/231 (27%), Gaps = 64/231 (27%)
Query: 437 CAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVRCLTPGMIVIRSWI 496
H G+ C Y G C++ P C G
Sbjct: 2 RGSHHHHHHGSI---EGRSAVTCDDYYYGFGCNKFCRPRDDFFGHYACDQNGNKTCME-- 56
Query: 497 LVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRH 556
+G C I C HG+ C C C+ G+ G +
Sbjct: 57 --------------GWMGPECNRAI--CRQGCSPKHGS--CK---LPGDCRCQYGWQGLY 95
Query: 557 CEVKDLAVKVTSMNASPTLAPLTVLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCIC 616
C+ G+C C+C
Sbjct: 96 CDKC----------------------------------IPHPGCVHGICN---EPWQCLC 118
Query: 617 PDNYSGRNCEYFGYDCDSN-PCQNGGFCRSKEGGGYRCDCPPGATGTHCEL 666
N+ G+ C+ C ++ PC NGG C + Y+C CP G +G +CE+
Sbjct: 119 ETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEI 169
Score = 57.8 bits (140), Expect = 2e-09
Identities = 33/175 (18%), Positives = 47/175 (26%), Gaps = 46/175 (26%)
Query: 1358 CASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCE 1417
S + G+ E + C Y G C C G D
Sbjct: 2 RGSHHHHHHGSIE---GRSAVTCDDYYYGFGCN---KFCRPRDDFFGHYACD--QNGNKT 53
Query: 1418 CQIGYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCAKAGNHRCDDECNTIACHFDG 1477
C G+ G C I G+C C C + G
Sbjct: 54 CMEGWMGPECNRAICRQG--CSPKHGSCKL---PGDCRCQYG---------------WQG 93
Query: 1478 NDCSLGINPWINCTANINCWEVFMNGRCDEVCNNPQCL----FDGRDCEKNLQPC 1528
C C + C ++G C+ QCL + G+ C+K+L C
Sbjct: 94 LYCD-------KCIPHPGC----VHGICN---EPWQCLCETNWGGQLCDKDLNYC 134
Score = 56.6 bits (137), Expect = 5e-09
Identities = 41/282 (14%), Positives = 62/282 (21%), Gaps = 116/282 (41%)
Query: 346 CAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAICDTNPIINGSYT 405
+ + G C G C C + +
Sbjct: 2 RGSHHHHHHGSI---EGRSAVTCDDYYYGFGC--NKFCRPRDDFFGHYA-----CDQNGN 51
Query: 406 CSCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTG 465
+C G+ G C+ I G+C C CQ + G
Sbjct: 52 KTCMEGWMGPECNRAICRQG---------------CSPKHGSCKL---PGDCRCQYGWQG 93
Query: 466 HDCHQKLDPCVPNSACVRCLTPGMIVIRSWILVYRTERMVIDFGMKHIGSRCEGDINECL 525
C ++C+
Sbjct: 94 LYC-----------------------------------------------------DKCI 100
Query: 526 SNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAPLTVLWIAY 585
+P HG + C C + G+ C+ +N T P
Sbjct: 101 PHPGCVHGIC-----NEPWQCLCETNWGGQLCD--------KDLNYCGTHQP-------- 139
Query: 586 NWSTTTTATAALATWNGGVCTALD-GGHTCICPDNYSGRNCE 626
NGG C+ + C CP+ YSG NCE
Sbjct: 140 -------------CLNGGTCSNTGPDKYQCSCPEGYSGPNCE 168
Score = 54.7 bits (132), Expect = 2e-08
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYT 60
G CN + C C + LC+ + PC+NGGTC+ D+Y
Sbjct: 104 GCVHGICNE--------PWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQ 155
Query: 61 CTCAPGFTGSQCEL 74
C+C G++G CE+
Sbjct: 156 CSCPEGYSGPNCEI 169
Score = 41.6 bits (98), Expect = 6e-04
Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 18/78 (23%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCL-PGACHNNGTCVD 1675
GIC + + C C+ + G C+ ++ C C N GTC +
Sbjct: 105 CVHGICNE---PWQCLCETNWGGQL-------------CDKDLNYCGTHQPCLNGGTCSN 148
Query: 1676 K-VGGFECRCPPGFVGSR 1692
++C CP G+ G
Sbjct: 149 TGPDKYQCSCPEGYSGPN 166
Score = 34.3 bits (79), Expect = 0.20
Identities = 16/76 (21%), Positives = 24/76 (31%), Gaps = 23/76 (30%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
G C C CQ G+ G Y C+ C+P +G C +
Sbjct: 74 PKHGSCKL---PGDCRCQYGWQGLY-------------CD----KCIPHPGCVHGICNE- 112
Query: 1677 VGGFECRCPPGFVGSR 1692
++C C + G
Sbjct: 113 --PWQCLCETNWGGQL 126
Score = 33.5 bits (77), Expect = 0.33
Identities = 15/87 (17%), Positives = 21/87 (24%), Gaps = 20/87 (22%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
G D C G+ G C + C G +G+C
Sbjct: 40 FFGHYACD--QNGNKTCMEGWMGPE-------------CNRAI--CRQGCSPKHGSCKL- 81
Query: 1677 VGGFECRCPPGFVGSRWTDAECFSNAN 1703
+CRC G+ G
Sbjct: 82 --PGDCRCQYGWQGLYCDKCIPHPGCV 106
Score = 30.8 bits (70), Expect = 2.9
Identities = 15/85 (17%), Positives = 18/85 (21%), Gaps = 21/85 (24%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
H G C Y G C C P D+
Sbjct: 8 HHHGSIE---GRSAVTCDDYYYGFG-------------CN---KFCRPRDDFFGHYACDQ 48
Query: 1677 VGGFECRCPPGFVGSRWTDAECFSN 1701
G C G++G A C
Sbjct: 49 NG--NKTCMEGWMGPECNRAICRQG 71
>1x7a_L Coagulation factor IX, light chain; inhibition, blood
clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP:
g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Length = 146
Score = 137 bits (347), Expect = 2e-37
Identities = 33/125 (26%), Positives = 45/125 (36%), Gaps = 6/125 (4%)
Query: 1215 GECIDGENSFTCACH------PGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKP 1268
ECI+ + SF A D+C NPC GG C+D IN Y+C C+
Sbjct: 16 RECIEEKCSFEEAREVFENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYECWCQV 75
Query: 1269 GTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANG 1328
G G NCE++ N ++ C C GY + + PC
Sbjct: 76 GFEGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFPCGRV 135
Query: 1329 GVCVD 1333
V
Sbjct: 136 SVSHS 140
Score = 137 bits (346), Expect = 2e-37
Identities = 29/126 (23%), Positives = 44/126 (34%), Gaps = 6/126 (4%)
Query: 1064 GTCVNTPGSFAC------NCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMP 1117
C+ SF N + + + ++CE +PC N G C DD ++ C C
Sbjct: 16 RECIEEKCSFEEAREVFENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYECWCQV 75
Query: 1118 GFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNG 1177
GF G CE D N + C+C G+ + Q + V PC
Sbjct: 76 GFEGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFPCGRV 135
Query: 1178 GICKDS 1183
+
Sbjct: 136 SVSHSP 141
Score = 130 bits (329), Expect = 5e-35
Identities = 31/129 (24%), Positives = 39/129 (30%), Gaps = 5/129 (3%)
Query: 1243 ECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSC 1302
EC C F E N + ++ ++C NPC NG C D IN Y C
Sbjct: 17 ECIEEKCSFEEAREVFEN-----TEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYEC 71
Query: 1303 ECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDP 1362
C G+ G +CE + N C C GY A P
Sbjct: 72 WCQVGFEGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFP 131
Query: 1363 CLNGGTCED 1371
C
Sbjct: 132 CGRVSVSHS 140
Score = 127 bits (322), Expect = 4e-34
Identities = 31/129 (24%), Positives = 45/129 (34%), Gaps = 5/129 (3%)
Query: 1319 ECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFIC 1378
EC C+ + + + D D+C +PCLNGG C+D +N + C
Sbjct: 17 ECIEEKCSFEEAREVFEN-----TEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYEC 71
Query: 1379 HCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKP 1438
C+ G+ GK CE D N T + C C GY + + P
Sbjct: 72 WCQVGFEGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFP 131
Query: 1439 CRHGGTCID 1447
C
Sbjct: 132 CGRVSVSHS 140
Score = 126 bits (319), Expect = 9e-34
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 6/120 (5%)
Query: 1104 CLDDPGTFRCVCM------PGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGF 1157
C+++ +F + D D+C NPCLNGG+C D IN+++C C +GF
Sbjct: 18 CIEEKCSFEEAREVFENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYECWCQVGF 77
Query: 1158 TGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRGEC 1217
G +C+++ + + + + C C G+ + + PC R
Sbjct: 78 EGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFPCGRVSV 137
Score = 126 bits (318), Expect = 1e-33
Identities = 24/130 (18%), Positives = 38/130 (29%), Gaps = 5/130 (3%)
Query: 1281 ECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKC 1340
EC C + ++C NPC NGG+C D I+ ++C
Sbjct: 17 ECIEEKCSFEEAR-----EVFENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYEC 71
Query: 1341 ECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNP 1400
C G+ C D + ++ +C C GY + P
Sbjct: 72 WCQVGFEGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFP 131
Query: 1401 CQHGGICTDH 1410
C +
Sbjct: 132 CGRVSVSHSP 141
Score = 121 bits (306), Expect = 5e-32
Identities = 30/129 (23%), Positives = 41/129 (31%), Gaps = 6/129 (4%)
Query: 1130 ECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTC 1189
EC C N ++ D C +PC NGG+CKD I Y C
Sbjct: 17 ECIEEKCSFEEAREVFEN-----TEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYEC 71
Query: 1190 ECLAGFTGMSCETNINDCASNPC-HRGECIDGENSFTCACHPGFTGALCNTQLDECASNP 1248
C GF G +CE + N + ++ C+C G+ A P
Sbjct: 72 WCQVGFEGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFP 131
Query: 1249 CQFGGQCED 1257
C
Sbjct: 132 CGRVSVSHS 140
Score = 118 bits (298), Expect = 6e-31
Identities = 26/155 (16%), Positives = 38/155 (24%), Gaps = 36/155 (23%)
Query: 996 GTCLDEVGDYSCLC------VDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQ 1049
C++E + VD D+C NPC NG
Sbjct: 16 RECIEEKCSFEEAREVFENTEKTNEFWKQYVDGDQCEPNPCLNG---------------- 59
Query: 1050 YSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPG 1109
G C + S+ C C GF G CE + +
Sbjct: 60 --------------GLCKDDINSYECWCQVGFEGKNCELDATCNIKNGRCKQFCKTGADS 105
Query: 1110 TFRCVCMPGFTGTQCETDIDECASNPCLNGGICND 1144
C C G+ + PC + +
Sbjct: 106 KVLCSCTTGYRLAPDQKSCKPAVPFPCGRVSVSHS 140
Score = 116 bits (292), Expect = 4e-30
Identities = 21/108 (19%), Positives = 34/108 (31%), Gaps = 1/108 (0%)
Query: 930 CHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCAS 989
+ D D+C +PC NG C + SY C C G+EG++C ++
Sbjct: 33 ENTEKTNEFWKQYVDGDQC-EPNPCLNGGLCKDDINSYECWCQVGFEGKNCELDATCNIK 91
Query: 990 FPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCN 1037
C C G+ + PC + +
Sbjct: 92 NGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFPCGRVSVSH 139
Score = 114 bits (288), Expect = 2e-29
Identities = 23/128 (17%), Positives = 33/128 (25%), Gaps = 6/128 (4%)
Query: 1169 CVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPC-HRGECIDGENSFTCA 1227
C+ C + + + C NPC + G C D NS+ C
Sbjct: 18 CIEEKCSFEEARE-----VFENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYECW 72
Query: 1228 CHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPC 1287
C GF G C N + C C G + + PC
Sbjct: 73 CQVGFEGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFPC 132
Query: 1288 RNGAKCVD 1295
+
Sbjct: 133 GRVSVSHS 140
Score = 111 bits (279), Expect = 2e-28
Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 7/127 (5%)
Query: 200 CLDDPGTFRCVC----MCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSG 255
C+++ +F E C+P+PC NGG+C++ N +YEC CQ G
Sbjct: 18 CIEEKCSFEEAREVFENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDIN-SYECWCQVG 76
Query: 256 YRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHN 315
+ GKNCE + N +K C C Y ++ P C
Sbjct: 77 FEGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFP--CGR 134
Query: 316 GATCTNS 322
+ +
Sbjct: 135 VSVSHSP 141
Score = 108 bits (273), Expect = 1e-27
Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 9/128 (7%)
Query: 160 GTCVNTPGSFAC------NCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMC 213
C+ SF N + + + ++CE +PC N G C DD ++ C C
Sbjct: 16 RECIEEKCSFEEAREVFENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYECWCQ- 74
Query: 214 EPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLC 273
G+ G+NCE + D+ C C +GYR +++ C
Sbjct: 75 -VGFEGKNCELDATCNIKNGRCKQFCKTGADS-KVLCSCTTGYRLAPDQKSCKPAVPFPC 132
Query: 274 QNGATCMD 281
+
Sbjct: 133 GRVSVSHS 140
Score = 104 bits (262), Expect = 5e-26
Identities = 23/120 (19%), Positives = 32/120 (26%), Gaps = 8/120 (6%)
Query: 247 NYECECQ------SGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCE 300
++E + + D C N C NG C D IN Y C C + G CE
Sbjct: 24 SFEEAREVFENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCE 83
Query: 301 QDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDR 360
D T + C C G+ + C +
Sbjct: 84 LDATCNIKNG--RCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFPCGRVSVSHSP 141
Score = 98.2 bits (245), Expect = 9e-24
Identities = 26/128 (20%), Positives = 39/128 (30%), Gaps = 9/128 (7%)
Query: 879 GTCIDLVNAYKCVCQVP------YTGHDCHQKLDPCVPNRCQHGARCTPSANFQDFACHC 932
CI+ +++ +V + D C PN C +G C N + C C
Sbjct: 16 RECIEEKCSFEEAREVFENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDIN--SYECWC 73
Query: 933 GVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPC 992
VG+ G+ C D + + LC C GY + FPC
Sbjct: 74 QVGFEGKNCELDATCNI-KNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFPC 132
Query: 993 QNGGTCLD 1000
Sbjct: 133 GRVSVSHS 140
Score = 97.8 bits (244), Expect = 1e-23
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 5/101 (4%)
Query: 1357 ECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTC 1416
EC + C E + + + D D+C NPC +GG+C D +N Y C
Sbjct: 17 ECIEEKCSFEEARE-----VFENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYEC 71
Query: 1417 ECQIGYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCA 1457
CQ+G+ G NCE++ + C C
Sbjct: 72 WCQVGFEGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCT 112
Score = 95.9 bits (239), Expect = 6e-23
Identities = 22/123 (17%), Positives = 34/123 (27%), Gaps = 9/123 (7%)
Query: 279 CMDGINKYSCLCL------ATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVN 332
C++ + T D D+C P C NG C + + + C C
Sbjct: 18 CIEEKCSFEEAREVFENTEKTNEFWKQYVDGDQCEPNP--CLNGGLCKDDINSYECWCQV 75
Query: 333 GWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLE-DACTSNPCHAD 391
G+ G +C L+ C CT G PC
Sbjct: 76 GFEGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFPCGRV 135
Query: 392 AIC 394
++
Sbjct: 136 SVS 138
Score = 94.0 bits (234), Expect = 2e-22
Identities = 21/91 (23%), Positives = 28/91 (30%), Gaps = 2/91 (2%)
Query: 152 AGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVC 211
+PC + G C + S+ C C GF G CE + + C C
Sbjct: 52 EPNPCLNGGLCKDDINSYECWCQVGFEGKNCELDATCNIKNGRCKQFCKTGADSKVLCSC 111
Query: 212 MCEPGYTGQNCESKYVPCDPSPCQNGGVCRE 242
GY + P P PC V
Sbjct: 112 T--TGYRLAPDQKSCKPAVPFPCGRVSVSHS 140
Score = 91.3 bits (227), Expect = 2e-21
Identities = 24/115 (20%), Positives = 38/115 (33%), Gaps = 3/115 (2%)
Query: 21 CSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCEL-QDHCA 79
+ + + C+ PC+NGG C ++ Y C C GF G CEL
Sbjct: 33 ENTEKTNEFWKQYVDG-DQCEPNPCLNGGLCK-DDINSYECWCQVGFEGKNCELDATCNI 90
Query: 80 SSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGECFNTHGSYT 134
+ T + C C G+ + V PC ++ + T
Sbjct: 91 KNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFPCGRVSVSHSPTTLT 145
Score = 89.7 bits (223), Expect = 8e-21
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 3/100 (3%)
Query: 865 INIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSAN 924
++ D C PC +GG C D +N+Y+C CQV + G +C + N T + +
Sbjct: 46 VDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELDATCNIKNGRCKQFCKTGADS 105
Query: 925 FQDFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTN 964
C C G+ + PC + H+
Sbjct: 106 --KVLCSCTTGYRLAPDQKSCKPAV-PFPCGRVSVSHSPT 142
Score = 88.9 bits (221), Expect = 1e-20
Identities = 26/138 (18%), Positives = 35/138 (25%), Gaps = 21/138 (15%)
Query: 319 CTNSVGGFSCIC------VNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGK 372
C F ++ D C C NG C D + S+ C C G
Sbjct: 18 CIEEKCSFEEAREVFENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYECWCQVGF 77
Query: 373 TGLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEI 432
G C L+ C C T + CSC +GY+ +
Sbjct: 78 EGKNCELDATCNIKNGRCKQFCKTGA--DSKVLCSCTTGYRLAPDQKSCKPAVP------ 129
Query: 433 NIDDCAFKPCRHGGTCID 450
PC
Sbjct: 130 -------FPCGRVSVSHS 140
Score = 88.6 bits (220), Expect = 2e-20
Identities = 22/143 (15%), Positives = 35/143 (24%), Gaps = 36/143 (25%)
Query: 61 CTCAPGFTGSQCELQ-DHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDD 119
+ + D C +PC NG +C ++YEC C GF G+ C D + +
Sbjct: 33 ENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELDATCNIKN 92
Query: 120 PCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTG 179
C+CT G+
Sbjct: 93 GRCKQ-----------------------------------FCKTGADSKVLCSCTTGYRL 117
Query: 180 PRCETNVNECESHPCQNDGSCLD 202
+ + PC
Sbjct: 118 APDQKSCKPAVPFPCGRVSVSHS 140
Score = 81.2 bits (201), Expect = 7e-18
Identities = 17/86 (19%), Positives = 24/86 (27%), Gaps = 2/86 (2%)
Query: 601 NGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGAT 660
NGG+C + C C + G+NCE N C++ C C G
Sbjct: 58 NGGLCKDDINSYECWCQVGFEGKNCELDATCNIKNGRCKQF-CKTGADSKVLCSCTTGYR 116
Query: 661 GTHCELDSRNECYSNPCQHAGTCEDR 686
+ PC
Sbjct: 117 LAPDQKSC-KPAVPFPCGRVSVSHSP 141
Score = 78.9 bits (195), Expect = 4e-17
Identities = 21/91 (23%), Positives = 27/91 (29%), Gaps = 2/91 (2%)
Query: 614 CICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECY 673
G C+ NPC NGG C+ Y C C G G +CELD+
Sbjct: 33 ENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDD-INSYECWCQVGFEGKNCELDA-TCNI 90
Query: 674 SNPCQHAGTCEDRIADYACYCLPMWNGKNCD 704
N + C C +
Sbjct: 91 KNGRCKQFCKTGADSKVLCSCTTGYRLAPDQ 121
Score = 75.5 bits (186), Expect = 7e-16
Identities = 25/129 (19%), Positives = 37/129 (28%), Gaps = 23/129 (17%)
Query: 357 CIDRVGSFYCQC------TPGKTGLLCHLE-DACTSNPCHADAICDTNPIINGSYTCSCA 409
CI+ SF +++ D C NPC +C + SY C C
Sbjct: 18 CIEEKCSFEEAREVFENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDI---NSYECWCQ 74
Query: 410 SGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCH 469
G+ +G NCE++ + C C Y
Sbjct: 75 VGF-------------EGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQ 121
Query: 470 QKLDPCVPN 478
+ P VP
Sbjct: 122 KSCKPAVPF 130
Score = 68.5 bits (168), Expect = 2e-13
Identities = 25/158 (15%), Positives = 41/158 (25%), Gaps = 58/158 (36%)
Query: 402 GSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQV 461
S+ + E+ + + ++ D C PC +GG C D +N+Y+C CQV
Sbjct: 23 CSFEEARE-------VFENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYECWCQV 75
Query: 462 PYTGHDCHQKLDPCVPNSACVRCLTPGMIVIRSWILVYRTERMVIDFGMKHIGSRCEGDI 521
+ G CE D
Sbjct: 76 GFEG-------------------------------------------------KNCELDA 86
Query: 522 NECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEV 559
+ N + C+C GY +
Sbjct: 87 TCNIKNGRCKQFC--KTGADSKVLCSCTTGYRLAPDQK 122
Score = 68.5 bits (168), Expect = 2e-13
Identities = 24/134 (17%), Positives = 37/134 (27%), Gaps = 32/134 (23%)
Query: 514 GSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASP 573
+ D ++C NPC + G C +N+Y C C+ G+ G++CE+ + N
Sbjct: 41 FWKQYVDGDQCEPNPCLNGGL--CKDDINSYECWCQVGFEGKNCELD------ATCNIKN 92
Query: 574 TLAPLTVLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCD 633
T D C C Y +
Sbjct: 93 GRC------------------------KQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAV 128
Query: 634 SNPCQNGGFCRSKE 647
PC S
Sbjct: 129 PFPCGRVSVSHSPT 142
Score = 68.1 bits (167), Expect = 3e-13
Identities = 20/92 (21%), Positives = 31/92 (33%), Gaps = 8/92 (8%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYT 60
C NGG C + S+ C C +GF CE+ T + +
Sbjct: 56 CLNGGLCKDDIN-----SYECWCQVGFEGKNCELDA-TCNIKNGRCKQFCKT-GADSKVL 108
Query: 61 CTCAPGFTGSQCELQ-DHCASSPCRNGAVCTS 91
C+C G+ + + PC +V S
Sbjct: 109 CSCTTGYRLAPDQKSCKPAVPFPCGRVSVSHS 140
Score = 58.5 bits (142), Expect = 7e-10
Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 13/76 (17%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
+GG+C D +N Y C CQ+G+ G CE++ +
Sbjct: 57 LNGGLCKDDINSYECWCQVGFEG-------------KNCELDATCNIKNGRCKQFCKTGA 103
Query: 1677 VGGFECRCPPGFVGSR 1692
C C G+ +
Sbjct: 104 DSKVLCSCTTGYRLAP 119
Score = 53.9 bits (130), Expect = 3e-08
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 653 CDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCDL 705
+ +D ++C NPC + G C+D I Y C+C + GKNC+L
Sbjct: 33 ENTEKTNEFWKQYVDG-DQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCEL 84
Score = 45.4 bits (108), Expect = 2e-05
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 1655 CEINVPDCLPGACHNNGTCVDKVGGFECRCPPGFVGSR 1692
++ C P C N G C D + +EC C GF G
Sbjct: 44 QYVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKN 81
Score = 38.1 bits (89), Expect = 0.006
Identities = 7/60 (11%), Positives = 11/60 (18%), Gaps = 13/60 (21%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
T + C C GY + + +P C
Sbjct: 95 CKQFCKTGADSKVLCSCTTGYRLAP-------------DQKSCKPAVPFPCGRVSVSHSP 141
Score = 29.6 bits (67), Expect = 4.7
Identities = 6/30 (20%), Positives = 9/30 (30%)
Query: 1800 TERNGSYLCECAKGYEGRDCLINTDDCASY 1829
T + LC C GY + +
Sbjct: 101 TGADSKVLCSCTTGYRLAPDQKSCKPAVPF 130
Score = 29.2 bits (66), Expect = 6.6
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 1804 GSYLCECAKGYEGRDCLINTDDCAS 1828
SY C C G+EG++C ++
Sbjct: 67 NSYECWCQVGFEGKNCELDATCNIK 91
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease,
EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein,
hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A
{Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB:
1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L*
2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L*
1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Length = 142
Score = 128 bits (325), Expect = 1e-34
Identities = 36/127 (28%), Positives = 51/127 (40%), Gaps = 10/127 (7%)
Query: 1215 GECIDGENSFTCACH------PGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKP 1268
EC + + SF A + + D+CAS+PCQ GG C+D + Y C C P
Sbjct: 15 RECKEEQCSFEEAREIFKDAERTKLFWISYSDGDQCASSPCQNGGSCKDQLQSYICFCLP 74
Query: 1269 GTSGTNCEININECYSNPCRNG---AKCVDGI-NRYSCECLPGYTGLHCETNINECASNP 1324
G NCE + ++ NG C D + SC C GY+ L + P
Sbjct: 75 AFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 134
Query: 1325 CANGGVC 1331
C +
Sbjct: 135 CGKIPIL 141
Score = 125 bits (317), Expect = 1e-33
Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 5/123 (4%)
Query: 1063 DGTCVNTPGSFACNCT-QGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTG 1121
+ C + ++ ++C S PCQN GSC D ++ C C+P F G
Sbjct: 19 EEQCSFEEAREIFKDAERTKLFWISYSDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEG 78
Query: 1122 TQCETDIDECASNPCLNGG---ICNDLINT-FKCACPIGFTGSHCQINIDDCVSSPCHNG 1177
CET D+ NGG C+D T C C G++ ++ V PC
Sbjct: 79 RNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCGKI 138
Query: 1178 GIC 1180
I
Sbjct: 139 PIL 141
Score = 120 bits (303), Expect = 1e-31
Identities = 34/132 (25%), Positives = 47/132 (35%), Gaps = 9/132 (6%)
Query: 1243 ECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSC 1302
EC C F E + + + ++C S+PC+NG C D + Y C
Sbjct: 16 ECKEEQCSFEEAREIFKD-----AERTKLFWISYSDGDQCASSPCQNGGSCKDQLQSYIC 70
Query: 1303 ECLPGYTGLHCETNINECASNPCANGG---VCVDLID-GFKCECPRGYYDARCLSDVDEC 1358
CLP + G +CET+ ++ NGG C D C C GY
Sbjct: 71 FCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPT 130
Query: 1359 ASDPCLNGGTCE 1370
PC E
Sbjct: 131 VEYPCGKIPILE 142
Score = 120 bits (302), Expect = 2e-31
Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 9/131 (6%)
Query: 1319 ECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFIC 1378
EC C+ D R SD D+CAS PC NGG+C+D L +IC
Sbjct: 16 ECKEEQCSFEEAREIFKD-----AERTKLFWISYSDGDQCASSPCQNGGSCKDQLQSYIC 70
Query: 1379 HCKPGYGGKRCEFDIDECGSNPCQHGG---ICTDHL-NGYTCECQIGYTGINCEINIDDC 1434
C P + G+ CE D+ ++GG C+DH +C C GY+ + ++
Sbjct: 71 FCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPT 130
Query: 1435 AFKPCRHGGTC 1445
PC
Sbjct: 131 VEYPCGKIPIL 141
Score = 116 bits (293), Expect = 3e-30
Identities = 35/132 (26%), Positives = 45/132 (34%), Gaps = 10/132 (7%)
Query: 1130 ECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTC 1189
EC C + + D C SSPC NGG CKD + Y C
Sbjct: 16 ECKEEQCSFEEAREIFKD-----AERTKLFWISYSDGDQCASSPCQNGGSCKDQLQSYIC 70
Query: 1190 ECLAGFTGMSCETNINDCASNPCHRG----ECIDGENS-FTCACHPGFTGALCNTQLDEC 1244
CL F G +CET+ +D G C D + +C CH G++
Sbjct: 71 FCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPT 130
Query: 1245 ASNPCQFGGQCE 1256
PC E
Sbjct: 131 VEYPCGKIPILE 142
Score = 111 bits (280), Expect = 2e-28
Identities = 34/166 (20%), Positives = 57/166 (34%), Gaps = 31/166 (18%)
Query: 943 EDVDECQLSSPCRNGATCHNTNGSYLCEC-AKGYEGRDCLINTDDCASFPCQNGGTCLDE 1001
E++ L C+ C + + + + D CAS PCQNGG+C D+
Sbjct: 6 EELRPGSLERECKEE-QCSFEEAREIFKDAERTKLFWISYSDGDQCASSPCQNGGSCKDQ 64
Query: 1002 VGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCE 1061
+ Y C C+ F G++CE D+ NG
Sbjct: 65 LQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQ------------------------ 100
Query: 1062 HDGTCVNTPGS-FACNCTQGFTGPRCETNVNECESHPCQNDGSCLD 1106
C + G+ +C C +G++ + +PC L+
Sbjct: 101 ---YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCGK-IPILE 142
Score = 105 bits (265), Expect = 2e-26
Identities = 30/122 (24%), Positives = 41/122 (33%), Gaps = 6/122 (4%)
Query: 1178 GICKDSIAGYTCECLA-GFTGMSCETNINDCASNPC-HRGECIDGENSFTCACHPGFTGA 1235
C A + ++ + CAS+PC + G C D S+ C C P F G
Sbjct: 20 EQCSFEEAREIFKDAERTKLFWISYSDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGR 79
Query: 1236 LCNTQLDECASNPCQFGG---QCEDLI-NGYQCRCKPGTSGTNCEININECYSNPCRNGA 1291
C T D+ + GG C D CRC G S ++ PC
Sbjct: 80 NCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCGKIP 139
Query: 1292 KC 1293
Sbjct: 140 IL 141
Score = 95.1 bits (237), Expect = 9e-23
Identities = 35/138 (25%), Positives = 48/138 (34%), Gaps = 11/138 (7%)
Query: 190 ESHPCQNDGSCLDDPGTFRCVCM----CEPGYTGQNCESKYVPCDPSPCQNGGVCRELDN 245
E P + C ++ +F E S C SPCQNGG C++
Sbjct: 7 ELRPGSLERECKEEQCSFEEAREIFKDAERTKLFWISYSDGDQCASSPCQNGGSCKDQLQ 66
Query: 246 LNYECECQSGYRGKNCEENIDDCPGNLCQNG---ATCMDGI-NKYSCLCLATYTGDLCEQ 301
+Y C C + G+NCE + DD + +NG C D K SC C Y+
Sbjct: 67 -SYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGV 125
Query: 302 DVDECSIRPSVCHNGATC 319
P C
Sbjct: 126 SCTPTVEYP--CGKIPIL 141
Score = 93.9 bits (234), Expect = 2e-22
Identities = 26/110 (23%), Positives = 39/110 (35%), Gaps = 6/110 (5%)
Query: 252 CQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPS 311
+ + D C + CQNG +C D + Y C CL + G CE D+ I
Sbjct: 34 AERTKLFWISYSDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICV- 92
Query: 312 VCHNG---ATCTNSVG-GFSCICVNGWTGPDCSLNIDDCAGAACFNGATC 357
NG C++ G SC C G++ ++ C
Sbjct: 93 -NENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCGKIPIL 141
Score = 92.8 bits (231), Expect = 6e-22
Identities = 32/127 (25%), Positives = 46/127 (36%), Gaps = 7/127 (5%)
Query: 120 PCVHGECFNTHGSYTFQMIFIFFTNQYSWFLI---AGSPCEHDGTCVNTPGSFACNCTQG 176
C +C F+ S+ A SPC++ G+C + S+ C C
Sbjct: 16 ECKEEQCSFEEAREIFKDAERTKLFWISYSDGDQCASSPCQNGGSCKDQLQSYICFCLPA 75
Query: 177 FTGPRCETNVNECESHPCQNDGS---CLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSP 233
F G CET+ ++ +N G C D GT R C C GY+ P P
Sbjct: 76 FEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKR-SCRCHEGYSLLADGVSCTPTVEYP 134
Query: 234 CQNGGVC 240
C +
Sbjct: 135 CGKIPIL 141
Score = 91.2 bits (227), Expect = 2e-21
Identities = 31/138 (22%), Positives = 51/138 (36%), Gaps = 16/138 (11%)
Query: 269 PGNLCQNGATCMDGINKYSCLC------LATYTGDLCEQDVDECSIRPSVCHNGATCTNS 322
PG+L + C + + T + D D+C+ P C NG +C +
Sbjct: 10 PGSLER---ECKEEQCSFEEAREIFKDAERTKLFWISYSDGDQCASSP--CQNGGSCKDQ 64
Query: 323 VGGFSCICVNGWTGPDCSLNIDDCAGAACFNG---ATCIDRVGSFY-CQCTPGKTGLLCH 378
+ + C C+ + G +C + DD NG C D G+ C+C G + L
Sbjct: 65 LQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADG 124
Query: 379 LE-DACTSNPCHADAICD 395
+ PC I +
Sbjct: 125 VSCTPTVEYPCGKIPILE 142
Score = 88.5 bits (220), Expect = 2e-20
Identities = 22/130 (16%), Positives = 39/130 (30%), Gaps = 13/130 (10%)
Query: 879 GTCIDLVNAYKCVCQVP------YTGHDCHQKLDPCVPNRCQHGARCTPSANFQDFACHC 932
C + +++ ++ + D C + CQ+G C + C C
Sbjct: 15 RECKEEQCSFEEAREIFKDAERTKLFWISYSDGDQCASSPCQNGGSCKDQLQ--SYICFC 72
Query: 933 GVGWTGRYCNEDVDECQLSSPCRNGATCH----NTNGSYLCECAKGYEGRDCLINTDDCA 988
+ GR C D+ NG +T C C +GY ++
Sbjct: 73 LPAFEGRNCETHKDDQL-ICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTV 131
Query: 989 SFPCQNGGTC 998
+PC
Sbjct: 132 EYPCGKIPIL 141
Score = 85.8 bits (213), Expect = 1e-19
Identities = 28/156 (17%), Positives = 46/156 (29%), Gaps = 35/156 (22%)
Query: 49 GTCTLKSLDRYTCTCAPGFTGSQCELQ-DHCASSPCRNGAVCTSLEDTYECDCAPGFVGQ 107
C+ + D CASSPC+NG C +Y C C P F G+
Sbjct: 20 EQCSFEEAREIFKDAERTKLFWISYSDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGR 79
Query: 108 TCSEDIIECVDDPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPG 167
C + + +G C + C + G
Sbjct: 80 NCETHKDDQLICVNENGGC--------------------------------EQYCSDHTG 107
Query: 168 S-FACNCTQGFTGPRCETNVNECESHPCQNDGSCLD 202
+ +C C +G++ + +PC L+
Sbjct: 108 TKRSCRCHEGYSLLADGVSCTPTVEYPCGK-IPILE 142
Score = 82.8 bits (205), Expect = 2e-18
Identities = 28/111 (25%), Positives = 34/111 (30%), Gaps = 7/111 (6%)
Query: 21 CSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCELQ-DHCA 79
+ + C S PC NGG+C L Y C C P F G CE D
Sbjct: 32 KDAERTKLFWISYSDG-DQCASSPCQNGGSCK-DQLQSYICFCLPAFEGRNCETHKDDQL 89
Query: 80 SSPCRNG---AVCTSLEDT-YECDCAPGFVGQTCSEDIIECVDDPCVHGEC 126
NG C+ T C C G+ V+ PC
Sbjct: 90 ICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCGKIPI 140
Score = 80.8 bits (200), Expect = 8e-18
Identities = 20/111 (18%), Positives = 30/111 (27%), Gaps = 3/111 (2%)
Query: 318 TCTNSVGGFSCICV-NGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLL 376
C+ + D CA + C NG +C D++ S+ C C P G
Sbjct: 21 QCSFEEAREIFKDAERTKLFWISYSDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRN 80
Query: 377 CHLE-DACTSNPCHADAICDT-NPIINGSYTCSCASGYKGVNCSEDINECE 425
C D + +C C GY +
Sbjct: 81 CETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTV 131
Score = 78.1 bits (193), Expect = 8e-17
Identities = 23/87 (26%), Positives = 29/87 (33%), Gaps = 4/87 (4%)
Query: 601 NGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGG---FCRSKEGGGYRCDCPP 657
NGG C + C C + GRNCE D +NGG +C G C C
Sbjct: 57 NGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHE 116
Query: 658 GATGTHCELDSRNECYSNPCQHAGTCE 684
G + + PC E
Sbjct: 117 GYSLLADGVSC-TPTVEYPCGKIPILE 142
Score = 71.6 bits (176), Expect = 2e-14
Identities = 23/107 (21%), Positives = 38/107 (35%), Gaps = 7/107 (6%)
Query: 603 GVCTALDGGHTCICPDN-YSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATG 661
C+ + + G C S+PCQNGG C+ + Y C C P G
Sbjct: 20 EQCSFEEAREIFKDAERTKLFWISYSDGDQCASSPCQNGGSCKDQ-LQSYICFCLPAFEG 78
Query: 662 THCELDSRNECYSNPCQHAGT---CEDRI-ADYACYCLPMWNGKNCD 704
+CE +++ ++ G C D +C C ++
Sbjct: 79 RNCETH-KDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADG 124
Score = 71.2 bits (175), Expect = 2e-14
Identities = 27/129 (20%), Positives = 37/129 (28%), Gaps = 22/129 (17%)
Query: 356 TCIDRVGSFYCQCTP-GKTGLLCHLE-DACTSNPCHADAICDTNPIINGSYTCSCASGYK 413
C + K + + + D C S+PC C SY C C +
Sbjct: 21 QCSFEEAREIFKDAERTKLFWISYSDGDQCASSPCQNGGSCKDQL---QSYICFCLPAF- 76
Query: 414 GVNCSEDINECEQGINCEINIDDCAFKPCRHGGT---CIDLV-NAYKCVCQVPYTGHDCH 469
+G NCE + DD +GG C D C C Y+
Sbjct: 77 ------------EGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADG 124
Query: 470 QKLDPCVPN 478
P V
Sbjct: 125 VSCTPTVEY 133
Score = 66.2 bits (162), Expect = 1e-12
Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 10/93 (10%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGT---CTLKSLD 57
CQNGG+C + S+ C C F CE + NGG C+ +
Sbjct: 55 CQNGGSCKDQLQ-----SYICFCLPAFEGRNCETHK-DDQLICVNENGGCEQYCSDHTGT 108
Query: 58 RYTCTCAPGFTGSQCELQ-DHCASSPCRNGAVC 89
+ +C C G++ + PC +
Sbjct: 109 KRSCRCHEGYSLLADGVSCTPTVEYPCGKIPIL 141
Score = 62.0 bits (151), Expect = 3e-11
Identities = 24/143 (16%), Positives = 36/143 (25%), Gaps = 51/143 (35%)
Query: 419 EDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPN 478
+D + + D CA PC++GG+C D + +Y C C +
Sbjct: 32 KDAERTKLFWISYSDGDQCASSPCQNGGSCKDQLQSYICFCLPAFE-------------- 77
Query: 479 SACVRCLTPGMIVIRSWILVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLD-C 537
G CE ++ L + G C
Sbjct: 78 -----------------------------------GRNCETHKDDQLICVNENGGCEQYC 102
Query: 538 VQLVNN-YHCNCRPGYMGRHCEV 559
C C GY V
Sbjct: 103 SDHTGTKRSCRCHEGYSLLADGV 125
Score = 58.9 bits (143), Expect = 4e-10
Identities = 24/134 (17%), Positives = 35/134 (26%), Gaps = 36/134 (26%)
Query: 514 GSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASP 573
D ++C S+PC + G+ C + +Y C C P + GR+CE
Sbjct: 40 FWISYSDGDQCASSPCQNGGS--CKDQLQSYICFCLPAFEGRNCE-----THKDDQLICV 92
Query: 574 TLAPLTVLWIAYNWSTTTTATAALATWNGGVCTA----LDGGHTCICPDNYSGRNCEYFG 629
NGG +C C + YS
Sbjct: 93 NE-------------------------NGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSC 127
Query: 630 YDCDSNPCQNGGFC 643
PC
Sbjct: 128 TPTVEYPCGKIPIL 141
Score = 54.3 bits (131), Expect = 1e-08
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 643 CRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKN 702
C +E D D ++C S+PCQ+ G+C+D++ Y C+CLP + G+N
Sbjct: 22 CSFEEAREIFKDAERTKLFWISYSDG-DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRN 80
Query: 703 CDL 705
C+
Sbjct: 81 CET 83
Score = 53.1 bits (128), Expect = 4e-08
Identities = 24/136 (17%), Positives = 42/136 (30%), Gaps = 33/136 (24%)
Query: 1405 GICTDHLNGYTCECQ-IGYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCAKAGNHR 1463
C+ + + D CA PC++GG+C D + +Y C C A
Sbjct: 20 EQCSFEEAREIFKDAERTKLFWISYSDGDQCASSPCQNGGSCKDQLQSYICFCLPA---- 75
Query: 1464 CDDECNTIACHFDGNDCSLGINPWINCTANINCWEVFMNGRCDEVCNNP-----QCL--- 1515
F+G +C + +N NG C++ C++ C
Sbjct: 76 -----------FEGRNCETHKDD---QLICVN-----ENGGCEQYCSDHTGTKRSCRCHE 116
Query: 1516 -FDGRDCEKNLQPCNP 1530
+ + P
Sbjct: 117 GYSLLADGVSCTPTVE 132
Score = 52.3 bits (126), Expect = 7e-08
Identities = 23/79 (29%), Positives = 27/79 (34%), Gaps = 17/79 (21%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGT---C 1673
Q+GG C D L Y C C + G CE + D L N G C
Sbjct: 56 QNGGSCKDQLQSYICFCLPAFEGRN-------------CETHKDDQLICVNENGGCEQYC 102
Query: 1674 VDKVG-GFECRCPPGFVGS 1691
D G CRC G+
Sbjct: 103 SDHTGTKRSCRCHEGYSLL 121
Score = 47.7 bits (114), Expect = 3e-06
Identities = 13/73 (17%), Positives = 21/73 (28%), Gaps = 12/73 (16%)
Query: 1620 GICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDKVGG 1679
C+ + +I + C C N G+C D++
Sbjct: 20 EQCSFEEAREIFKDAERTKLFWI------------SYSDGDQCASSPCQNGGSCKDQLQS 67
Query: 1680 FECRCPPGFVGSR 1692
+ C C P F G
Sbjct: 68 YICFCLPAFEGRN 80
Score = 31.5 bits (72), Expect = 1.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 1804 GSYLCECAKGYEGRDCLINTDDCAS 1828
SY+C C +EGR+C + DD
Sbjct: 66 QSYICFCLPAFEGRNCETHKDDQLI 90
Score = 30.8 bits (70), Expect = 1.9
Identities = 20/137 (14%), Positives = 27/137 (19%), Gaps = 61/137 (44%)
Query: 791 NGRCDEVCNNPQCL----FDGRDCEKNLQPCNPIYDGRLLFSQLNFARDHDPGVWLMYFL 846
G C + + C F+GR+CE +
Sbjct: 58 GGSCKDQLQSYICFCLPAFEGRNCETH--------------------------------- 84
Query: 847 YSAITIRRKLKPLQQQQPINIDDCAFKPCRHGGT---CIDLV-NAYKCVCQVPYTGHDCH 902
DD +GG C D C C Y+
Sbjct: 85 --------------------KDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADG 124
Query: 903 QKLDPCVPNRCQHGARC 919
P V C
Sbjct: 125 VSCTPTVEYPCGKIPIL 141
Score = 30.8 bits (70), Expect = 2.2
Identities = 5/27 (18%), Positives = 8/27 (29%)
Query: 1803 NGSYLCECAKGYEGRDCLINTDDCASY 1829
C C +GY ++ Y
Sbjct: 107 GTKRSCRCHEGYSLLADGVSCTPTVEY 133
Score = 29.2 bits (66), Expect = 6.4
Identities = 10/62 (16%), Positives = 18/62 (29%), Gaps = 17/62 (27%)
Query: 1616 YQHGG---ICTDHL-NGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNG 1671
++GG C+DH +C C GY+ ++ + C
Sbjct: 93 NENGGCEQYCSDHTGTKRSCRCHEGYSLLA-------------DGVSCTPTVEYPCGKIP 139
Query: 1672 TC 1673
Sbjct: 140 IL 141
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell
cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A
2f8x_K 3nbn_B 3v79_K* 1ot8_A
Length = 253
Score = 114 bits (288), Expect = 3e-28
Identities = 61/111 (54%), Positives = 73/111 (65%), Gaps = 15/111 (13%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP----------- 1870
+ LIN+ AD+N D+ GK+ALHWAAAVNN+DA +LL +G N
Sbjct: 135 AVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPL 194
Query: 1871 ----REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
REGSY K LLD+FANR+ITDHMDRLPRD+A ER+HHDIVRLLD
Sbjct: 195 FLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLE 245
Score = 72.5 bits (179), Expect = 8e-14
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 16/109 (14%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHG---VNP----------- 1870
D A L+ A AD N+ DN G+T LH A + + IL+ + ++
Sbjct: 71 DAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLIL 130
Query: 1871 --REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
R G + L+++ A+ D + + A+ + D +L ++
Sbjct: 131 AARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN 179
Score = 70.2 bits (173), Expect = 5e-13
Identities = 24/113 (21%), Positives = 39/113 (34%), Gaps = 17/113 (15%)
Query: 1822 NTDDCASYLINADADI-NVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP---------- 1870
+ S I A + N D +G+TALH AA + DA LL +
Sbjct: 34 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTP 93
Query: 1871 -----REGSYGACKALLDNFA-NREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+ G + L+ N A + + H P +A+ ++ L
Sbjct: 94 LHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS 146
Score = 62.5 bits (153), Expect = 2e-10
Identities = 8/46 (17%), Positives = 19/46 (41%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP 1870
+ A L++ A+ ++ D+ + A + D V +L +
Sbjct: 204 ETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHH 249
Score = 57.9 bits (141), Expect = 6e-09
Identities = 21/111 (18%), Positives = 35/111 (31%), Gaps = 29/111 (26%)
Query: 1836 DINVPDNSGKTALHWAA-------------AVNNIDAVNILLSHGVNP------------ 1870
D+NV G T L A+ + ++ + G +
Sbjct: 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETAL 61
Query: 1871 ----REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
R A K LL+ A+ I D+M R P A + ++L +
Sbjct: 62 HLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN 112
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG
NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Length = 423
Score = 115 bits (288), Expect = 5e-27
Identities = 47/282 (16%), Positives = 84/282 (29%), Gaps = 27/282 (9%)
Query: 1060 CEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDP--GTFRCVCMP 1117
+G+ +++ P + + G+ C
Sbjct: 133 IYKNGSFIHSVPRHEVPDILEVHLPHAQPQ-DAGVYSARYIGGNLFTSAFTRLIVRRCEA 191
Query: 1118 GFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDC-----VSS 1172
G +C C+N G+C++ +T +C CP GF G C+ +
Sbjct: 192 QKWGPECN-----HLCTACMNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCKE 244
Query: 1173 PCHNGGICKDSIA----GYTCECLAGFTGMSCETNINDCASNP--CHRGECIDG---ENS 1223
C CK + Y C C G+ G+ C + P R C +G +
Sbjct: 245 RCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRF 304
Query: 1224 FTCACHPGFTGALCNTQ-LDECASNPCQFGGQCEDLINGYQCRCK-PGTSGTNCEININE 1281
C C PG+ G C + + E + CK G E +
Sbjct: 305 QGCLCSPGWQGLQCEREGIPRMTPKIVDLPDHIEVNSGKFNPICKASGWPLPTNE-EMTL 363
Query: 1282 CYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASN 1323
+ K + + +S + L ++ + C+ N
Sbjct: 364 VKPDGTVLHPKDFNHTDHFSVAIFTIHRILPPDSGVWVCSVN 405
Score = 109 bits (272), Expect = 7e-25
Identities = 49/313 (15%), Positives = 75/313 (23%), Gaps = 49/313 (15%)
Query: 1094 ESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICND--LINTFKC 1151
E +GS + + + D + GG
Sbjct: 129 EDAVIYKNGSFIHSVPRHEVPDILEVHLPHAQPQ-DAGVYSARYIGGNLFTSAFTRLIVR 187
Query: 1152 ACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNP 1211
C G C + + + C N G+C + C C GF G +CE
Sbjct: 188 RCEAQKWGPEC-----NHLCTACMNNGVCHED--TGECICPPGFMGRTCEKACELHTFGR 240
Query: 1212 CHRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTS 1271
+ C C+ C L + Y C C G
Sbjct: 241 TCKERC--------------------------SGQEGCKSYVFC--LPDPYGCSCATGWK 272
Query: 1272 GTNCEININECYSNP-------CRNGAKCVDGINRYSCECLPGYTGLHCET-NINECASN 1323
G C + + P C NG C C C PG+ GL CE I
Sbjct: 273 GLQCNEACHPGFYGPDCKLRCSCNNGEMCD---RFQGCLCSPGWQGLQCEREGIPRMTPK 329
Query: 1324 PCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPG 1383
F C + ++ D + + + F
Sbjct: 330 IVDLPDHIEVNSGKFNPICKASGWPLPTNEEMTLVKPDGTVLHPKDFNHTDHFSVAIFTI 389
Query: 1384 YGGKRCEFDIDEC 1396
+ + + C
Sbjct: 390 HRILPPDSGVWVC 402
Score = 107 bits (269), Expect = 1e-24
Identities = 58/315 (18%), Positives = 91/315 (28%), Gaps = 47/315 (14%)
Query: 18 SFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDR-YTCTCAPGFTGSQCELQD 76
P L ++ GG + R C G +C
Sbjct: 143 VPRHEVPDILEVHLPHAQPQDAGVYSARYIGGNLFTSAFTRLIVRRCEAQKWGPECN--- 199
Query: 77 HCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGECFNTHGSYTFQ 136
+ C N VC EDT EC C PGF+G+TC + C
Sbjct: 200 -HLCTACMNNGVCH--EDTGECICPPGFMGRTCEKACELHTFGRTCKERCSG-------- 248
Query: 137 MIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNEC------- 189
C+ C+ P + C+C G+ G +C +
Sbjct: 249 ----------------QEGCKSYVFCL--PDPYGCSCATGWKGLQCNEACHPGFYGPDCK 290
Query: 190 ESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYE 249
C N C G C+C PG+ G CE + +P + E+++ +
Sbjct: 291 LRCSCNNGEMCDRFQG-----CLCSPGWQGLQCEREGIPRMTPKIVDLPDHIEVNSGKFN 345
Query: 250 CECQ-SGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSI 308
C+ SG+ EE P + + + +S + + V CS+
Sbjct: 346 PICKASGWPLPTNEEMTLVKP-DGTVLHPKDFNHTDHFSVAIFTIHRILPPDSGVWVCSV 404
Query: 309 RPSVCHNGATCTNSV 323
SV
Sbjct: 405 NTVAGMVEKPFNISV 419
Score = 104 bits (259), Expect = 3e-23
Identities = 53/309 (17%), Positives = 75/309 (24%), Gaps = 47/309 (15%)
Query: 875 CRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQDFACHCGV 934
G+ I V ++ + Q D V + G SA + C
Sbjct: 133 IYKNGSFIHSVPRHEVPDILEVHLPHA-QPQDAGVYSARYIGGNLFTSAFTRLIVRRCEA 191
Query: 935 GWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCA-----S 989
G CN + C N CH G C C G+ GR C +
Sbjct: 192 QKWGPECNHL------CTACMNNGVCHEDTGE--CICPPGFMGRTCEKACELHTFGRTCK 243
Query: 990 FPCQNGGTCLDEV----GDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIF 1045
C C V Y C C G+ G C P
Sbjct: 244 ERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLR----------- 292
Query: 1046 FTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCET-NVNECESHPCQNDGSC 1104
C + C G C C+ G+ G +CE +
Sbjct: 293 ------------CSCNNGEMCDRFQG---CLCSPGWQGLQCEREGIPRMTPKIVDLPDHI 337
Query: 1105 LDDPGTFRCVC-MPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQ 1163
+ G F +C G+ E L+ N + F A
Sbjct: 338 EVNSGKFNPICKASGWPLPTNEEMTLVKPDGTVLHPKDFNH-TDHFSVAIFTIHRILPPD 396
Query: 1164 INIDDCVSS 1172
+ C +
Sbjct: 397 SGVWVCSVN 405
Score = 103 bits (257), Expect = 6e-23
Identities = 48/243 (19%), Positives = 67/243 (27%), Gaps = 32/243 (13%)
Query: 154 SPCEHDGTCVNTP--GSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVC 211
S G + C GP C C N+G C +D G C
Sbjct: 168 SARYIGGNLFTSAFTRLIVRRCEAQKWGPECN-----HLCTACMNNGVCHEDTGE----C 218
Query: 212 MCEPGYTGQNCES-----KYVPCDPSPCQNGGVCREL---DNLNYECECQSGYRGKNCEE 263
+C PG+ G+ CE + C C+ Y C C +G++G C E
Sbjct: 219 ICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNE 278
Query: 264 NIDDCPGNL-------CQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNG 316
C NG C CLC + G CE++ P +
Sbjct: 279 ACHPGFYGPDCKLRCSCNNGEMC---DRFQGCLCSPGWQGLQCEREGIPRMT-PKIVDLP 334
Query: 317 ATCTNSVGGFSCIC-VNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGL 375
+ G F+ IC +GW P + F L
Sbjct: 335 DHIEVNSGKFNPICKASGWPLPTNEEMTLVKPDGTVLHPKDFNHT-DHFSVAIFTIHRIL 393
Query: 376 LCH 378
Sbjct: 394 PPD 396
Score = 102 bits (255), Expect = 8e-23
Identities = 43/281 (15%), Positives = 73/281 (25%), Gaps = 31/281 (11%)
Query: 1174 CHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRGECIDGE--NSFTCACHPG 1231
+ G S+ + + + S G C
Sbjct: 133 IYKNGSFIHSVPRHEVPDILEVHLPHAQPQDAGVYSARYIGGNLFTSAFTRLIVRRCEAQ 192
Query: 1232 FTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECY-----SNP 1286
G C C G C + + +C C PG G CE
Sbjct: 193 KWGPEC-----NHLCTACMNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCKER 245
Query: 1287 CRNGAKCVDGI----NRYSCECLPGYTGLHCETNINECASNP-------CANGGVCVDLI 1335
C C + + Y C C G+ GL C + P C NG +C
Sbjct: 246 CSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDR-- 303
Query: 1336 DGFKCECPRGYYDARCLSD-VDECASDPCLNGGTCEDGLNQFICHCK-PGYGGKRCEFDI 1393
C C G+ +C + + E +F CK G+ E ++
Sbjct: 304 -FQGCLCSPGWQGLQCEREGIPRMTPKIVDLPDHIEVNSGKFNPICKASGWPLPTNE-EM 361
Query: 1394 DECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDC 1434
+ +H + ++ + + + + C
Sbjct: 362 TLVKPDGTVLHPKDFNHTDHFSVAIFTIHRILPPDSGVWVC 402
Score = 93.6 bits (232), Expect = 7e-20
Identities = 52/331 (15%), Positives = 77/331 (23%), Gaps = 64/331 (19%)
Query: 156 CEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEP 215
+G+ +++ P + + G+ T V CE
Sbjct: 133 IYKNGSFIHSVPRHEVPDILEVHLPHAQPQ-DAGVYSARYIGGNLFTSAFTRLIVRRCEA 191
Query: 216 GYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQN 275
G C + C N GVC EC C G+ G+ CE+ +
Sbjct: 192 QKWGPECN-----HLCTACMNNGVC---HEDTGECICPPGFMGRTCEKACELHTFGRTCK 243
Query: 276 GATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWT 335
C C + C + C C GW
Sbjct: 244 E----------RCSGQEG-------------------CKSYVFC--LPDPYGCSCATGWK 272
Query: 336 GPDCSLNIDDCA-------GAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPC 388
G C+ +C NG C G C C+PG GL C E P
Sbjct: 273 GLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQG---CLCSPGWQGLQCEREGIPRMTPK 329
Query: 389 HADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTC 448
D ASG+ E G
Sbjct: 330 IVDLPDHIEVNSGKFNPICKASGWPLPTNEEMTLVKPDG--------------TVLHPKD 375
Query: 449 IDLVNAYKCVCQVPYTGHDCHQKLDPCVPNS 479
+ + + + + C N+
Sbjct: 376 FNHTDHFSVAIFTIHRILPPDSGVWVCSVNT 406
Score = 91.3 bits (226), Expect = 5e-19
Identities = 43/285 (15%), Positives = 67/285 (23%), Gaps = 60/285 (21%)
Query: 868 DDCAFKPCRHGGTCID--LVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANF 925
D + GG C+ G +C+ + C + C
Sbjct: 163 DAGVYSARYIGGNLFTSAFTRLIVRRCEAQKWGPECN-----HLCTACMNNGVCHE---- 213
Query: 926 QDFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNT--------NGSYLCECAKGYEG 977
C C G+ GR C + + C+ + Y C CA G++G
Sbjct: 214 DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKG 273
Query: 978 RDCLINTDDCASFP-------CQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPC 1030
C P C NG C CLC G+ G CE + +
Sbjct: 274 LQCNEACHPGFYGPDCKLRCSCNNGEMC---DRFQGCLCSPGWQGLQCEREGIPRMTPKI 330
Query: 1031 HNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCT-QGFTGPRCETN 1089
+ G F C G+ P E
Sbjct: 331 -----------------------------VDLPDHIEVNSGKFNPICKASGWPLPTNEEM 361
Query: 1090 VNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASN 1134
+ + F ++ + C+ N
Sbjct: 362 -TLVKPDGTVLHPKDFNHTDHFSVAIFTIHRILPPDSGVWVCSVN 405
Score = 79.0 bits (194), Expect = 4e-15
Identities = 44/269 (16%), Positives = 68/269 (25%), Gaps = 72/269 (26%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYT 60
C N G C+ + C CP GF CE
Sbjct: 205 CMNNGVCH-------EDTGECICPPGFMGRTCEKA------------------------- 232
Query: 61 CTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDP 120
C G C+ + C++ C L D Y C CA G+ G C+E P
Sbjct: 233 --CELHTFGRTCKERCSG-QEGCKSYVFC--LPDPYGCSCATGWKGLQCNEACHPGFYGP 287
Query: 121 CVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGP 180
C C + C G C C+ G+ G
Sbjct: 288 DCKLRC----------------------------SCNNGEMCDRFQG---CLCSPGWQGL 316
Query: 181 RCET-NVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGV 239
+CE + + G F +C G+ E + +
Sbjct: 317 QCEREGIPRMTPKIVDLPDHIEVNSGKFNPICKA-SGWPLPTNEEMTLVKPDGTVLHPKD 375
Query: 240 CRELDNLNYECECQSGYRGKNCEENIDDC 268
++ + +R + + C
Sbjct: 376 FN--HTDHFSVAIFTIHRILPPDSGVWVC 402
Score = 75.1 bits (184), Expect = 6e-14
Identities = 39/200 (19%), Positives = 62/200 (31%), Gaps = 24/200 (12%)
Query: 290 CLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCI-CVNGWTGPDCSLNIDDCAG 348
L + + + G T++ C GP+C+ C
Sbjct: 148 VPDILEVHLPHAQPQDAGVYSARYIGGNLFTSAFTRLIVRRCEAQKWGPECNHLCTACM- 206
Query: 349 AACFNGATCIDRVGSFYCQCTPGKTGLLCHLE------DACTSNPCHADAICDTNPIIN- 401
N C + G C C PG G C C C +
Sbjct: 207 ----NNGVCHEDTGE--CICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLP 260
Query: 402 GSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQV 461
Y CSCA+G+KG+ C+E + G +C++ C +G C C+C
Sbjct: 261 DPYGCSCATGWKGLQCNEACHPGFYGPDCKLRC------SCNNGEMC---DRFQGCLCSP 311
Query: 462 PYTGHDCHQKLDPCVPNSAC 481
+ G C ++ P +
Sbjct: 312 GWQGLQCEREGIPRMTPKIV 331
Score = 75.1 bits (184), Expect = 8e-14
Identities = 40/250 (16%), Positives = 69/250 (27%), Gaps = 32/250 (12%)
Query: 1287 CRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVD--LIDGFKCECPR 1344
+ + R+ + H + + + GG C
Sbjct: 133 IYKNGSFIHSVPRHEVPDILEVHLPHAQPQ-DAGVYSARYIGGNLFTSAFTRLIVRRCEA 191
Query: 1345 GYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECG-----SN 1399
+ C C+N G C + + C C PG+ G+ CE +
Sbjct: 192 QKWGPEC-----NHLCTACMNNGVCHEDTGE--CICPPGFMGRTCEKACELHTFGRTCKE 244
Query: 1400 PCQHGGICTDHL----NGYTCECQIGYTGINCEINIDDCAFKP-------CRHGGTCIDL 1448
C C ++ + Y C C G+ G+ C + P C +G C
Sbjct: 245 RCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMC--- 301
Query: 1449 VNAYKCVCAKA-GNHRCDDEC--NTIACHFDGNDCSLGINPWINCTANINCWEVFMNGRC 1505
C+C+ +C+ E D D + N + W + N
Sbjct: 302 DRFQGCLCSPGWQGLQCEREGIPRMTPKIVDLPDHIEVNSGKFNPICKASGWPLPTNEEM 361
Query: 1506 DEVCNNPQCL 1515
V + L
Sbjct: 362 TLVKPDGTVL 371
Score = 65.5 bits (159), Expect = 8e-11
Identities = 35/190 (18%), Positives = 50/190 (26%), Gaps = 37/190 (19%)
Query: 523 ECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAPLTVLW 582
L C ++G C + + C C PG+MGR CE
Sbjct: 199 NHLCTACMNNGV--CHE--DTGECICPPGFMGRTCE-------------------KACEL 235
Query: 583 IAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCE------YFGYDCDSN- 635
+ + + + C C C + G C ++G DC
Sbjct: 236 HTFGRTCKERCSGQEGCKSYVFCLPDPY--GCSCATGWKGLQCNEACHPGFYGPDCKLRC 293
Query: 636 PCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADYACYC- 694
C NG C C C PG G CE + E + C
Sbjct: 294 SCNNGEMCDR----FQGCLCSPGWQGLQCEREGIPRMTPKIVDLPDHIEVNSGKFNPICK 349
Query: 695 LPMWNGKNCD 704
W +
Sbjct: 350 ASGWPLPTNE 359
Score = 58.9 bits (142), Expect = 1e-08
Identities = 42/355 (11%), Positives = 73/355 (20%), Gaps = 92/355 (25%)
Query: 351 CFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCAS 410
+ + I V +DA + + C +
Sbjct: 133 IYKNGSFIHSVPRHEVPDILEVHLPHAQPQDAGVYSARYIGGNL-FTSAFTRLIVRRCEA 191
Query: 411 GYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQ 470
G C+ C + G C + + +C+C + G C +
Sbjct: 192 QKWGPECNHLCT------------------ACMNNGVCHE--DTGECICPPGFMGRTCEK 231
Query: 471 KLDPCVPNSACVRCLTPGMIVIRSWILVYRTERMVIDFGMKHIGSRCEGDINECLSNPCS 530
+ C RC G C
Sbjct: 232 ACELHTFGRTCKE--------------------------------RCSGQ------EGCK 253
Query: 531 SHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAPLTVLWIAYNWSTT 590
S+ + Y C+C G+ G C Y
Sbjct: 254 SYVFCL----PDPYGCSCATGWKGLQCNEACHP-------------------GFYGPDCK 290
Query: 591 TTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGG 650
+ NG +C D C+C + G CE G + + G
Sbjct: 291 LRCS----CNNGEMC---DRFQGCLCSPGWQGLQCEREGIPRMTPKIVDLPDHIEVNSGK 343
Query: 651 YRCDCP-PGATGTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCD 704
+ C G E + + ++ + D
Sbjct: 344 FNPICKASGWPLPTNE--EMTLVKPDGTVLHPKDFNHTDHFSVAIFTIHRILPPD 396
Score = 58.6 bits (141), Expect = 1e-08
Identities = 40/251 (15%), Positives = 62/251 (24%), Gaps = 63/251 (25%)
Query: 310 PSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCID--RVGSFYCQ 367
+V + + +SV + P D +A + G +
Sbjct: 130 DAVIYKNGSFIHSVPRHEVPDILEVHLPHAQPQ-DAGVYSARYIGGNLFTSAFTRLIVRR 188
Query: 368 CTPGKTGLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQG 427
C K G C C + +C + C C G+ G C + G
Sbjct: 189 CEAQKWGPEC----NHLCTACMNNGVCH-----EDTGECICPPGFMGRTCEKACELHTFG 239
Query: 428 INCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVRCLTP 487
C+ C+ C L + Y C C + G C++ P C
Sbjct: 240 RTCKERCSGQE--GCKSYVFC--LPDPYGCSCATGWKGLQCNEACHPGFYGPDC------ 289
Query: 488 GMIVIRSWILVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCN 547
L C++ D C
Sbjct: 290 ------------------------------------KLRCSCNNGEMCD-----RFQGCL 308
Query: 548 CRPGYMGRHCE 558
C PG+ G CE
Sbjct: 309 CSPGWQGLQCE 319
Score = 40.8 bits (95), Expect = 0.004
Identities = 16/117 (13%), Positives = 24/117 (20%), Gaps = 8/117 (6%)
Query: 588 STTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKE 647
+ G H + + S G S
Sbjct: 122 KKVLIKEEDAVIYKNGSFIHSVPRHEVPDILEVHLPHAQPQDAGVYSARYIGGNLFTSAF 181
Query: 648 GGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCD 704
C G C C + G C + C C P + G+ C+
Sbjct: 182 TRLIVRRCEAQKWGPEC------NHLCTACMNNGVCHED--TGECICPPGFMGRTCE 230
Score = 33.1 bits (75), Expect = 0.87
Identities = 7/88 (7%), Positives = 18/88 (20%), Gaps = 4/88 (4%)
Query: 866 NIDDCAFKPCRHGGTCIDLVNAYKCVCQVP-YTGHDCHQKLDPCVPNRCQHGARCTPSAN 924
I K + +C+ + + H +
Sbjct: 322 GIPRMTPKIVDLPDHIEVNSGKFNPICKASGWPLPTNEEMTLVKPDGTVLHPKDFNHT-- 379
Query: 925 FQDFACHCGVGWTGRYCNEDVDECQLSS 952
F+ + V C +++
Sbjct: 380 -DHFSVAIFTIHRILPPDSGVWVCSVNT 406
Score = 32.0 bits (72), Expect = 2.3
Identities = 41/325 (12%), Positives = 63/325 (19%), Gaps = 83/325 (25%)
Query: 1363 CLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGY 1422
+ D L + H +P G I I C+
Sbjct: 142 SVPRHEVPDILEVHLPHAQPQDAGVYSARYIGGNLFTSAFTRLIV--------RRCEAQK 193
Query: 1423 TGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCAKA-GNHRCDDECNTIACHFDGNDCS 1481
G C C + G C + + +C+C C+ C H G C
Sbjct: 194 WGPECN-----HLCTACMNNGVCHE--DTGECICPPGFMGRTCEKACE---LHTFGRTCK 243
Query: 1482 LGINPWINCTANINCWEVFMNGRCDEVCNNPQCLFDGRDCEKNLQPCNPIYDAYCQKHYA 1541
+ C + + C C + G C + P D +
Sbjct: 244 ERCSGQEGCKSYVFCLPDPYGCSCAT-------GWKGLQCNEACHPGFYGPDCKLRCSCN 296
Query: 1542 NGHCDYSCNNAEC--NWDGLDCEREPPSLADGAISIIVLMDMQMFKQNKVSFLRELGHEL 1599
NG C W GL CERE
Sbjct: 297 NGEMCDRFQGCLCSPGWQGLQCEREGIPRMTP---------------------------- 328
Query: 1600 RATVRIKQEPTGHEMIYQHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINV 1659
I + + C+ +
Sbjct: 329 --------------KIVDLPDHIEVNSGKFNPICKASGWPLP-------------TNEEM 361
Query: 1660 PDCLPGACHNNGTCVDKVGGFECRC 1684
P + + F
Sbjct: 362 TLVKPDGTVLHPKDFNHTDHFSVAI 386
Score = 30.8 bits (69), Expect = 4.4
Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 11/76 (14%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
+ C + Y C C G+ G + G C++ C+N C
Sbjct: 253 KSYVFC--LPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCS------CNNGEMCDRF 304
Query: 1677 VGGFECRCPPGFVGSR 1692
G C C PG+ G +
Sbjct: 305 QG---CLCSPGWQGLQ 317
Score = 30.8 bits (69), Expect = 4.6
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
+ G+C + + C C G+ G T G C+ C + C+
Sbjct: 206 MNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCK--ERCSGQEGCKSYVFCLP- 260
Query: 1677 VGGFECRCPPGFVGSR 1692
+ C C G+ G +
Sbjct: 261 -DPYGCSCATGWKGLQ 275
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin
repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A
1ymp_A
Length = 223
Score = 108 bits (273), Expect = 1e-26
Identities = 62/108 (57%), Positives = 74/108 (68%), Gaps = 15/108 (13%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
LIN+ AD+N D+ GK+ALHWAAAVNN+DA +LL +G N
Sbjct: 106 GMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLA 165
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
REGSY K LLD+FANR+ITDHMDRLPRD+A ER+HHDIVRLLDE+
Sbjct: 166 AREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEY 213
Score = 70.1 bits (173), Expect = 3e-13
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 16/109 (14%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHG---VN--------P--- 1870
D A L+ A AD N+ DN G+T LH A + + IL+ + ++ P
Sbjct: 39 DAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLIL 98
Query: 1871 --REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
R G + L+++ A+ D + + A+ + D +L ++
Sbjct: 99 AARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN 147
Score = 68.2 bits (168), Expect = 1e-12
Identities = 24/113 (21%), Positives = 39/113 (34%), Gaps = 17/113 (15%)
Query: 1822 NTDDCASYLINADADI-NVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP---------- 1870
+ S I A + N D +G+TALH AA + DA LL +
Sbjct: 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTP 61
Query: 1871 -----REGSYGACKALLDNFA-NREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+ G + L+ N A + + H P +A+ ++ L
Sbjct: 62 LHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS 114
Score = 62.8 bits (154), Expect = 1e-10
Identities = 8/45 (17%), Positives = 20/45 (44%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVN 1869
+ A L++ A+ ++ D+ + A + D V +L + +
Sbjct: 172 ETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion,
pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo
sapiens} PDB: 3k71_B* 3k72_B*
Length = 687
Score = 112 bits (282), Expect = 3e-25
Identities = 66/383 (17%), Positives = 96/383 (25%), Gaps = 67/383 (17%)
Query: 1005 YSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDG 1064
Y C +G + ++ +C + T + A +
Sbjct: 360 YDSFCSNGVTHRNQP--RGDCDGVQINVPITFQV--------------KVTATECIQEQS 403
Query: 1065 TCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQC 1124
+ G Q C + C G C C G+ G C
Sbjct: 404 FVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECG----ICRCDTGYIGKNC 459
Query: 1125 ETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPC--HNGGICKD 1182
E +S + +C C DCV C H +
Sbjct: 460 ECQTQGRSSQEL-------------EGSCRKDNNSIICSGL-GDCVCGQCLCHTSDVPGK 505
Query: 1183 SIAGYTCECLAGFTGMSCETNINDCASNPCHRGECIDGENSFTCACHPGFTGALCNTQLD 1242
I G CEC ++CE P G C G C CHPGF G+ C +
Sbjct: 506 LIYGQYCEC----DTINCERYNGQVCGGPGR-GLCFCG----KCRCHPGFEGSACQCERT 556
Query: 1243 EC-----ASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGI 1297
C G+C C C G C+ +PC C +
Sbjct: 557 TEGCLNPRRVECSGRGRCRC----NVCECHSGYQLPLCQ--ECPGCPSPCGKYISCAEC- 609
Query: 1298 NRYSCECLPGYTGLHCETN-INECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVD 1356
+ G G +C SN G C + C Y + D
Sbjct: 610 ----LKFEKGPFGKNCSAACPGLQLSNNPVKGRTC---KERDSEGCWVAYTLEQQ--DGM 660
Query: 1357 ECASDPCLNGGTCEDGLNQFICH 1379
+ C G + +
Sbjct: 661 DRYLIYVDESRECVAGPDGCGEN 683
Score = 112 bits (280), Expect = 5e-25
Identities = 55/373 (14%), Positives = 91/373 (24%), Gaps = 67/373 (17%)
Query: 1065 TCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQC 1124
V +C V + Q + G V + +C
Sbjct: 366 NGVTHRNQPRGDCDGVQINVPITFQVKVTATECIQEQSFVIRALGFTDIVTVQVLPQCEC 425
Query: 1125 ETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSI 1184
+ C G C C G+ G +C+ S G C+
Sbjct: 426 RCRDQSRDRSLCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELE--GSCRKDN 479
Query: 1185 AGYTCECLAGFTGMSCETNINDCASNPCHRGECIDGENSFTCACHPGFTGALC------- 1237
C G+C+ G C CH
Sbjct: 480 NSIICSG----------------------LGDCVCG----QCLCHTSDVPGKLIYGQYCE 513
Query: 1238 --NTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININEC-----YSNPCRNG 1290
+ C G+ +CRC PG G+ C+ C
Sbjct: 514 CDTINCERYNGQVCGGPGRGLC--FCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGR 571
Query: 1291 AKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDAR 1350
+C CEC GY C+ +PC C + + +G +
Sbjct: 572 GRCRCN----VCECHSGYQLPLCQE--CPGCPSPCGKYISCAEC-----LKFEKGPFGKN 620
Query: 1351 CLSDV-DECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTD 1409
C + S+ + G TC++ + C Y ++ D + C
Sbjct: 621 CSAACPGLQLSNNPVKGRTCKERDS---EGCWVAYTLEQQ--DGMDRYLIYVDESRECVA 675
Query: 1410 HLNGYTCECQIGY 1422
+ C + +
Sbjct: 676 GPD--GCGENLYF 686
Score = 112 bits (280), Expect = 5e-25
Identities = 63/379 (16%), Positives = 86/379 (22%), Gaps = 72/379 (18%)
Query: 1110 TFRCVCMPGFTGTQCET--------------DIDECASNPCLNGGICNDLINTFKCACPI 1155
T+ C G T + A+ +
Sbjct: 359 TYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATECIQEQSFVIRALGFTDIVTVQ 418
Query: 1156 GFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRG 1215
C+ S CH G + I C C G+ G +CE +S G
Sbjct: 419 VLPQCECRCRDQSRDRSLCHGKGFLECGI----CRCDTGYIGKNCECQTQGRSSQELE-G 473
Query: 1216 ECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNC 1275
C NS C+ C C LI G C C
Sbjct: 474 SCRKDNNSIICSGLGDCVCGQCL----------CHTSDVPGKLIYGQYCEC------DTI 517
Query: 1276 EININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINEC-----ASNPCANGGV 1330
C G C C PG+ G C+ C+ G
Sbjct: 518 NCERYNGQVCGGPGRGLCFCG----KCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGR 573
Query: 1331 CVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCE 1390
C CEC GY C PC +C + + G GK C
Sbjct: 574 CRC----NVCECHSGYQLPLC--QECPGCPSPCGKYISCAEC-----LKFEKGPFGKNCS 622
Query: 1391 FD-IDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLV 1449
SN G C + C + YT + G +
Sbjct: 623 AACPGLQLSNNPVKGRTCK---ERDSEGCWVAYTLEQQD-------------GMDRYLIY 666
Query: 1450 NAYKCVCAKAGNHRCDDEC 1468
C + ++
Sbjct: 667 VDESRECVAGPDGCGENLY 685
Score = 110 bits (276), Expect = 1e-24
Identities = 70/393 (17%), Positives = 91/393 (23%), Gaps = 74/393 (18%)
Query: 951 SSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEVGDYSCLCV 1010
S C NG T N +C A+ Q + +G + V
Sbjct: 361 DSFCSNGVTHRNQPR---GDCDGVQINVPITFQVKVTATECIQEQSFVIRALGFTDIVTV 417
Query: 1011 DGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTP 1070
C + CH
Sbjct: 418 QVLPQCECRCRDQSRDRSLCHGKGFLE--------------------------------- 444
Query: 1071 GSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDE 1130
C C G+ G CE S + GSC D + C + QC
Sbjct: 445 -CGICRCDTGYIGKNCECQTQGRSSQELE--GSCRKDNNSIICSGLGDCVCGQCL----- 496
Query: 1131 CASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCE 1190
C + LI C C + G+C C
Sbjct: 497 -----CHTSDVPGKLIYGQYCECD------TINCERYNGQVCGGPGRGLCFC----GKCR 541
Query: 1191 CLAGFTGMSCETNINDCASNPCHRGECIDGE--NSFTCACHPGFTGALCNTQLDECASNP 1248
C GF G +C+ R EC C CH G+ LC +P
Sbjct: 542 CHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQE--CPGCPSP 599
Query: 1249 CQFGGQCEDLINGYQCRCKPGTSGTNCEIN-INECYSNPCRNGAKCVDGINRYSCECLPG 1307
C C + + G G NC SN G C R S C
Sbjct: 600 CGKYISC-----AECLKFEKGPFGKNCSAACPGLQLSNNPVKGRTC---KERDSEGCWVA 651
Query: 1308 YTGLHCETNINECASNPCANGGVCVDLIDGFKC 1340
YT + + CV DG
Sbjct: 652 YTLEQQDG--MDRYLIYVDESRECVAGPDGCGE 682
Score = 102 bits (254), Expect = 6e-22
Identities = 59/379 (15%), Positives = 87/379 (22%), Gaps = 76/379 (20%)
Query: 888 YKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQDFACHCGVGWTGRYCNEDVDE 947
Y C T + + C V
Sbjct: 360 YDSFCSNGVTHRNQPR--------------------------GDCDGVQINVPITFQVK- 392
Query: 948 CQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEVGDYSC 1007
+ + + G + +C C G + C
Sbjct: 393 VTATECIQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGI----C 448
Query: 1008 LCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCV 1067
C G+ GK+CE SS + C G CV
Sbjct: 449 RCDTGYIGKNCECQTQGRSSQELEGSCRKDN-----------------NSIICSGLGDCV 491
Query: 1068 NTPGS--FACNCTQGFTGPRCETNVNECESH---PCQNDGSCLDDPGTFRCVCMPGFTGT 1122
+ + G CE + CE + C G L G C C PGF G+
Sbjct: 492 CGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGK--CRCHPGFEGS 549
Query: 1123 QCETDIDEC-----ASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNG 1177
C+ + C G C C C G+ CQ SPC
Sbjct: 550 ACQCERTTEGCLNPRRVECSGRGRCRC----NVCECHSGYQLPLCQEC--PGCPSPCGKY 603
Query: 1178 GICKDSIAGYTCECLAGFTGMSCETN-INDCASNPCHRGECIDGENSFTCACHPGFTGAL 1236
C + G G +C SN +G + + C +T
Sbjct: 604 ISC-----AECLKFEKGPFGKNCSAACPGLQLSNNPVKGRTCKERD--SEGCWVAYTLEQ 656
Query: 1237 CNTQLDECASNPCQFGGQC 1255
+ + +C
Sbjct: 657 QDG--MDRYLIYVDESREC 673
Score = 97.1 bits (241), Expect = 2e-20
Identities = 59/379 (15%), Positives = 91/379 (24%), Gaps = 82/379 (21%)
Query: 860 QQQQPINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARC 919
+ A + + I + V +C + + C
Sbjct: 384 NVPITFQVKVTATECIQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFL 443
Query: 920 TPSANFQDFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRD 979
C C G+ G+ C S +C N S +C
Sbjct: 444 ECGI------CRCDTGYIGKNCECQTQGR---SSQELEGSCRKDNNSIICSGLGDCVCGQ 494
Query: 980 CLINTDDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQF 1039
CL C + G++CE D C +NG C
Sbjct: 495 CL----------CHTS-----------DVPGKLIYGQYCECDTINC---ERYNGQVCG-- 528
Query: 1040 QMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNEC-----E 1094
G + G C C GF G C+
Sbjct: 529 ----------------------GPGRGLCFCGK--CRCHPGFEGSACQCERTTEGCLNPR 564
Query: 1095 SHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACP 1154
C G C + C C G+ C+ +PC C +
Sbjct: 565 RVECSGRGRCRCN----VCECHSGYQLPLCQE--CPGCPSPCGKYISCAEC-----LKFE 613
Query: 1155 IGFTGSHCQIN-IDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCH 1213
G G +C +S+ G CK+ + C +T +
Sbjct: 614 KGPFGKNCSAACPGLQLSNNPVKGRTCKER---DSEGCWVAYTLEQQDGMDRYLIYVDES 670
Query: 1214 RGECIDGENSFTCACHPGF 1232
R EC+ G + C + F
Sbjct: 671 R-ECVAGPD--GCGENLYF 686
Score = 94.4 bits (234), Expect = 2e-19
Identities = 60/367 (16%), Positives = 81/367 (22%), Gaps = 60/367 (16%)
Query: 59 YTCTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVD 118
Y C+ G T D C + + + Q+ + D
Sbjct: 360 YDSFCSNGVTHRNQPRGD------CDGVQINVPITFQVKVTATECIQEQSFVIRALGFTD 413
Query: 119 DPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFT 178
V + S C G C C G+
Sbjct: 414 IVTVQVLP--------------QCECRCRDQSRDRSLCHGKGFLECG----ICRCDTGYI 455
Query: 179 GPRCETNVNE-------------CESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESK 225
G CE S C G C+ + GQ CE
Sbjct: 456 GKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECD 515
Query: 226 YVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCP-----GNLCQNGATCM 280
+ C+ Q G +C C G+ G C+ C C
Sbjct: 516 TINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCR 575
Query: 281 DGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCS 340
C C + Y LC++ C PS C +C G G +CS
Sbjct: 576 CN----VCECHSGYQLPLCQE----CPGCPSPCGKYISCAE-----CLKFEKGPFGKNCS 622
Query: 341 LN-IDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAICDTNPI 399
G TC +R C T D C P
Sbjct: 623 AACPGLQLSNNPVKGRTCKERDS---EGCWVAYTLEQQDGMD-RYLIYVDESRECVAGPD 678
Query: 400 INGSYTC 406
G
Sbjct: 679 GCGENLY 685
Score = 90.5 bits (224), Expect = 3e-18
Identities = 65/319 (20%), Positives = 90/319 (28%), Gaps = 60/319 (18%)
Query: 1 CQNGGTCNVRQSPSYSPSFW--CSCPIGFSASLCEIPVA--------NSCDSFPCMNGGT 50
T V+ + + +GF+ + + S D C G
Sbjct: 383 INVPITFQVKVTATECIQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGF 442
Query: 51 CTLKSLDRYTCTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCS 110
+ C C G+ G CE Q SS E C CS
Sbjct: 443 L-----ECGICRCDTGYIGKNCECQTQGRSSQE------------LEGSCRKDNNSIICS 485
Query: 111 EDIIECVDDPCVHGECFNTHGSYTFQMIFIFF--TNQYSWFLIAGSPCEHDGTCVNTPGS 168
CV G+C ++I+ + + + G C G + G
Sbjct: 486 G------LGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGK 539
Query: 169 FACNCTQGFTGPRCETNVNEC-----ESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCE 223
C C GF G C+ C G C + VC C GY C+
Sbjct: 540 --CRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCN------VCECHSGYQLPLCQ 591
Query: 224 SKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEEN-IDDCPGNLCQNGATCMDG 282
P PSPC C E + + G GKNC N G TC
Sbjct: 592 --ECPGCPSPCGKYISCAEC------LKFEKGPFGKNCSAACPGLQLSNNPVKGRTC--- 640
Query: 283 INKYSCLCLATYTGDLCEQ 301
+ S C YT + +
Sbjct: 641 KERDSEGCWVAYTLEQQDG 659
Score = 89.0 bits (220), Expect = 8e-18
Identities = 55/367 (14%), Positives = 90/367 (24%), Gaps = 78/367 (21%)
Query: 83 CRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGECFNTHGSYTFQMIFIFF 142
+ A+ +L+ TY+ C+ G + +C F +
Sbjct: 347 LDHNALPDTLKVTYDSFCSNGVTHRNQPRG--DCDGVQINVPITFQVKVT---------- 394
Query: 143 TNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLD 202
A + + G Q C + C G
Sbjct: 395 ---------ATECIQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLEC 445
Query: 203 DPGTFRCVCMCEPGYTGQNCESKY-------------VPCDPSPCQNGGVCRELDNLNYE 249
+C C+ GY G+NCE + + C G C + +
Sbjct: 446 G------ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDC-----VCGQ 494
Query: 250 CECQSGYR------GKNCEENIDDCP---GNLCQNGATCMDGINKYSCLCLATYTGDLCE 300
C C + G+ CE + +C G +C + K C C + G C+
Sbjct: 495 CLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGK--CRCHPGFEGSACQ 552
Query: 301 QDVDECSIRPS---VCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATC 357
+ C C C C +G+ P C + C +C
Sbjct: 553 CERTTEGCLNPRRVECSGRGRCRC----NVCECHSGYQLPLCQ--ECPGCPSPCGKYISC 606
Query: 358 IDRVGSFYCQCTPGKTGLLCHLE--DACTSNPCHADAICDTNPIINGSYTCSCASGYKGV 415
+ + G G C SN C + C Y
Sbjct: 607 AEC-----LKFEKGPFGKNCSAACPGLQLSNNPVKGRTC------KERDSEGCWVAYTLE 655
Query: 416 NCSEDIN 422
Sbjct: 656 QQDGMDR 662
Score = 88.2 bits (218), Expect = 1e-17
Identities = 56/344 (16%), Positives = 84/344 (24%), Gaps = 56/344 (16%)
Query: 1207 CASNPCHRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRC 1266
+ + N C Q+ A+ Q +
Sbjct: 357 KVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATECIQEQSFVIRALGFTDIVT 416
Query: 1267 KPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNP-- 1324
C + C GI C C GY G +CE +S
Sbjct: 417 VQVLPQCECRCRDQSRDRSLCHGKGFLECGI----CRCDTGYIGKNCECQTQGRSSQELE 472
Query: 1325 -----------CANGGVCVDLIDGFKCECPRGYYDARCLS-----------DVDECASDP 1362
C+ G CV +C C + + +
Sbjct: 473 GSCRKDNNSIICSGLGDCVCG----QCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCG 528
Query: 1363 CLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECG-----SNPCQHGGICTDHLNGYTCE 1417
G C G C C PG+ G C+ + G C G C CE
Sbjct: 529 GPGRGLCFCG----KCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC----NVCE 580
Query: 1418 CQIGYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCAKAGNHRCDDECNTIACHFDG 1477
C GY C+ PC +C K G + C C +
Sbjct: 581 CHSGYQLPLCQEC--PGCPSPCGKYISC---AECLKFEKGPFGKN-CSAACPGLQL---S 631
Query: 1478 NDCSLGINPWINCTANINCWEVFMNGRCDEVCNNPQCLFDGRDC 1521
N+ G + CW + + D + + + R+C
Sbjct: 632 NNPVKGRT--CKERDSEGCWVAYTLEQQDGMDRYLIYVDESREC 673
Score = 86.3 bits (213), Expect = 4e-17
Identities = 61/362 (16%), Positives = 90/362 (24%), Gaps = 69/362 (19%)
Query: 18 SFWCSCPIGFSASLCEI---PVANSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGS---- 70
++ C G + T T ++ A GFT
Sbjct: 359 TYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATECIQEQSFVIRALGFTDIVTVQ 418
Query: 71 -----QCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGE 125
+C +D +G + C C G++G+ C G
Sbjct: 419 VLPQCECRCRDQSRDRSLCHGKGFL---ECGICRCDTGYIGKNCECQTQGRSSQEL-EGS 474
Query: 126 CFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGS--FACNCTQGFTGPRCE 183
C + C G CV + + G CE
Sbjct: 475 CRKDNN---------------------SIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCE 513
Query: 184 TNVNECESH---PCQNDGSCLDDPGTFRCVCMCEPGYTGQNCE-----SKYVPCDPSPCQ 235
+ CE + C G L G C C PG+ G C+ + C
Sbjct: 514 CDTINCERYNGQVCGGPGRGLCFCGK----CRCHPGFEGSACQCERTTEGCLNPRRVECS 569
Query: 236 NGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYT 295
G CR CEC SGY+ C+E + C +C +
Sbjct: 570 GRGRCR-----CNVCECHSGYQLPLCQEC--PGCPSPCGKYISCAEC-----LKFEKGPF 617
Query: 296 GDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGA 355
G C + + G TC S C +T + D
Sbjct: 618 GKNCSAACPGLQLSNN-PVKGRTCKERD---SEGCWVAYTLEQQ--DGMDRYLIYVDESR 671
Query: 356 TC 357
C
Sbjct: 672 EC 673
Score = 85.9 bits (212), Expect = 7e-17
Identities = 65/442 (14%), Positives = 93/442 (21%), Gaps = 105/442 (23%)
Query: 270 GNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCI 329
G L ++ + + I + D S C NG T N
Sbjct: 321 GELSEDSSNVVQLIKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPR---GD 377
Query: 330 CVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACT-SNPC 388
C + + A + I +G C D + C
Sbjct: 378 CDGVQINVPITFQVKVTATECIQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLC 437
Query: 389 HADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTC 448
H + C C +GY G NC D C G C
Sbjct: 438 HGKGFLECG-------ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDC 490
Query: 449 IDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVRCLTPGMIVIRSWILVYRTERMVIDF 508
+ +C+C
Sbjct: 491 VC----GQCLCHTSDVPGKLIY-------------------------------------- 508
Query: 509 GMKHIGSRCEGDINEC---LSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVK 565
G CE D C C G C C C PG+ G C+ +
Sbjct: 509 -----GQYCECDTINCERYNGQVCGGPGRGLCF----CGKCRCHPGFEGSACQCERTTEG 559
Query: 566 VTSMNASPTLAPLTVLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNC 625
+ G C + C C Y C
Sbjct: 560 CLNPRRVECS-------------------------GRGRCR----CNVCECHSGYQLPLC 590
Query: 626 EYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCED 685
+ +PC C G G +C SN TC++
Sbjct: 591 QEC--PGCPSPCGKYISC------AECLKFEKGPFGKNCSAACPGLQLSNNPVKGRTCKE 642
Query: 686 RIADYACYCLPMWNGKNCDLYD 707
R + C + + D D
Sbjct: 643 R---DSEGCWVAYTLEQQDGMD 661
Score = 73.6 bits (180), Expect = 5e-13
Identities = 61/401 (15%), Positives = 80/401 (19%), Gaps = 105/401 (26%)
Query: 161 TCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQ 220
V +C V + Q + G +
Sbjct: 366 NGVTHRNQPRGDCDGVQINVPITFQVKVTATECIQEQSFVIRALGF--TDIVTVQVLPQC 423
Query: 221 NCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCM 280
C + D S C G C C +GY GKNCE + +C
Sbjct: 424 ECRCRDQSRDRSLCHGKGFLE-----CGICRCDTGYIGKNCECQTQGRSSQELEG--SCR 476
Query: 281 DGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCS 340
N C L C +CH + G C C
Sbjct: 477 KDNNSIICSGLGDCVCGQC------------LCHTSDVPGKLIYGQYCECDTI------- 517
Query: 341 LNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAICDTNPII 400
N + G C + G C+C PG G C E C
Sbjct: 518 -NCERYNGQVCGGPGRGLCFCGK--CRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRC 574
Query: 401 NGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQ 460
C C SGY+ C E PC +C + +
Sbjct: 575 R-CNVCECHSGYQLPLCQEC---------------PGCPSPCGKYISCAEC-----LKFE 613
Query: 461 VPYTGHDCHQKLDPCVPNSACVRCLTPGMIVIRSWILVYRTERMVIDFGMKHIGSRCEGD 520
G +C
Sbjct: 614 KGPFGKNCSAACPGL--------------------------------------------- 628
Query: 521 INECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKD 561
LSN T C C Y + D
Sbjct: 629 ---QLSNNPVKGRT--CK---ERDSEGCWVAYTLEQQDGMD 661
Score = 72.8 bits (178), Expect = 7e-13
Identities = 55/453 (12%), Positives = 84/453 (18%), Gaps = 142/453 (31%)
Query: 232 SPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCL 291
S C NG R +C + Q + + + + +
Sbjct: 362 SFCSNGVTHRNQPR----GDCDGVQINVPITFQVKVTATECIQEQSFVIRALGFTDIVTV 417
Query: 292 ATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAAC 351
CE + S S+CH + C C G+ G +C +
Sbjct: 418 --QVLPQCECRCRDQSRDRSLCHGKGFLECGI----CRCDTGYIGKNCECQTQGRSSQEL 471
Query: 352 FNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCASG 411
C ++C C C +
Sbjct: 472 -------------EGSCRKDNNSIICSGLGDCVCGQCLCHT------------SDVPGKL 506
Query: 412 YKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQK 471
G C D CE+ C G + KC C + G C +
Sbjct: 507 IYGQYCECDTINCERYNGQ----------VCGGPGRGLC--FCGKCRCHPGFEGSACQCE 554
Query: 472 LDPCVPNSACVRCLTPGMIVIRSWILVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSS 531
+ CS
Sbjct: 555 RTTEGCLNPR--------------------------------------------RVECSG 570
Query: 532 HGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAPLTVLWIAYNWSTTT 591
G C C C GY C+
Sbjct: 571 RGRCRC------NVCECHSGYQLPLCQ--------------------------------E 592
Query: 592 TATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYF-GYDCDSNPCQNGGFCRSKEGGG 650
C G+NC SN G C+ ++
Sbjct: 593 CPGCPSPCGKYISC-----AECLKFEKGPFGKNCSAACPGLQLSNNPVKGRTCKERDS-- 645
Query: 651 YRCDCPPGATGTHCELDSRNECYSNPCQHAGTC 683
C T + + Y + C
Sbjct: 646 --EGCWVAYTLEQQD---GMDRYLIYVDESREC 673
Score = 69.4 bits (169), Expect = 9e-12
Identities = 49/361 (13%), Positives = 73/361 (20%), Gaps = 74/361 (20%)
Query: 1249 CQFGGQCEDLINGYQCRCKPGTSGTNCE--------------ININECYSNPCRNGAKCV 1294
+ L Y C G + N + + + + +
Sbjct: 347 LDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATECIQEQSFVI 406
Query: 1295 DGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSD 1354
+ + C + C G C C GY C
Sbjct: 407 RALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLEC----GICRCDTGYIGKNCECQ 462
Query: 1355 VDECASDP-------------CLNGGTCEDGLNQFICHCKPG------YGGKRCEFDIDE 1395
+S C G C G C C G+ CE D
Sbjct: 463 TQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVPGKLIYGQYCECDTIN 518
Query: 1396 CGSNPCQHGGICTDHLNGY----TCECQIGYTGINCEINIDDCAFK-----PCRHGGTCI 1446
C +G +C G C C G+ G C+ C G C
Sbjct: 519 C---ERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCR 575
Query: 1447 DLVNAYKCVCAK--AGNHRCDDECNTIACHFDGNDCSLGINPWINCTANINCWEVFMNGR 1504
C C + C +C + +
Sbjct: 576 C----NVCECHSGYQLPLCQECPGCPSPCGKYI-----------SCAECLKFEKGPFGKN 620
Query: 1505 CDEVCNNPQCLFDGRDCEKNLQPCNPIYDAYCQKHYANGHCDYSCNNAECNWDGLDCERE 1564
C C Q + + C C Y D + +C
Sbjct: 621 CSAACPGLQL----SNNPVKGRTCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECVAG 676
Query: 1565 P 1565
P
Sbjct: 677 P 677
Score = 63.6 bits (154), Expect = 5e-10
Identities = 53/425 (12%), Positives = 88/425 (20%), Gaps = 108/425 (25%)
Query: 739 CKQNNCRAKAGNHRCDDECNTIACHFDGNDCSLGINPWINCTANINCWEVFMNGRCDEVC 798
C CD + F + + + + + C
Sbjct: 364 CSNGVTHRNQPRGDCDGVQINVPITFQVKVTATECIQEQSFVIRALGFTDIVTVQVLPQC 423
Query: 799 NNPQCLFDGRDCEKNLQPCNPIYDGRLLFSQLNFARDHDPGVWLMYFLYSAITIRRKLKP 858
+C Q + S + + G+ Y
Sbjct: 424 ----------ECRCRDQSRDR--------SLCHGKGFLECGICRCDTGYIG--------- 456
Query: 859 LQQQQPINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGAR 918
+C + ++ C+ C CV +C
Sbjct: 457 ---------KNCECQTQGRSSQELE------GSCRKDNNSIICSGL-GDCVCGQCL---- 496
Query: 919 CTPSANFQDFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGR 978
C S G G+YC D C+ + G C C G+EG
Sbjct: 497 CHTS-------DVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGS 549
Query: 979 DCLINTD-----DCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNG 1033
C + C G C C C G+ C+ +PC
Sbjct: 550 ACQCERTTEGCLNPRRVECSGRGRCR----CNVCECHSGYQLPLCQ--ECPGCPSPCGKY 603
Query: 1034 ATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNV-NE 1092
+C + +G G C
Sbjct: 604 ISCAE-----------------------------------CLKFEKGPFGKNCSAACPGL 628
Query: 1093 CESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCA 1152
S+ +C + C +T Q D + C + C
Sbjct: 629 QLSNNPVKGRTCKE---RDSEGCWVAYTLEQQ--DGMDRYLIYVDESRECVAGPDG--CG 681
Query: 1153 CPIGF 1157
+ F
Sbjct: 682 ENLYF 686
Score = 60.1 bits (145), Expect = 7e-09
Identities = 55/410 (13%), Positives = 77/410 (18%), Gaps = 101/410 (24%)
Query: 603 GVCTALDGGHTCICPDNYSGRNCEYFGYD----CDSNPCQNGGFCRSKEGGGYRCDCPPG 658
+ L + C + + RN D Q G
Sbjct: 351 ALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATECIQEQSFVIRALG 410
Query: 659 ATGTHCELDSR--------NECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCDLYDPLF 710
T + C G E I C C + GKNC+
Sbjct: 411 FTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGI----CRCDTGYIGKNCECQTQGR 466
Query: 711 RGGLGRDTKKQITSLSGFDFELEKEMEKCKQNNCRAKAGNHRCDDECNTIACHFDGNDCS 770
+ + + G C G C
Sbjct: 467 SSQELEGSCR------------KDNNSIICSGLGDCVCGQCLCHTSDVPGKL-IYGQYCE 513
Query: 771 LGINPWINCTANINCWEVFMNGRCDEVCNNPQCL--FDGRDCEKNLQPCNPIYDGRLLFS 828
C GR C +C F+G C+ + R+
Sbjct: 514 CD-TINCERYNGQVCGG---PGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRV--- 566
Query: 829 QLNFARDHDPGVWLMYFLYSAITIRRKLKPLQQQQPINIDDCAFKPCRHGGTCIDLVNAY 888
C G C
Sbjct: 567 ---------------------------------------------ECSGRGRCRC----N 577
Query: 889 KCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQDFACHCGVGWTGRYCNEDVDEC 948
C C Y C + P P+ C C G G+ C+
Sbjct: 578 VCECHSGYQLPLCQE--CPGCPSPCGKYISCAEC-------LKFEKGPFGKNCSAACPGL 628
Query: 949 QLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTC 998
QLS+ G TC + C Y + D C
Sbjct: 629 QLSNNPVKGRTCKERDS---EGCWVAYTLEQQ--DGMDRYLIYVDESREC 673
Score = 48.2 bits (114), Expect = 3e-05
Identities = 56/423 (13%), Positives = 90/423 (21%), Gaps = 123/423 (29%)
Query: 1283 YSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCEC 1342
Y + C NG + + +C + + A+ + +
Sbjct: 360 YDSFCSNGVTHRN---QPRGDCDGVQINVPITFQVKVTATECIQEQSFVIRALGFTDIVT 416
Query: 1343 PRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQ 1402
+ C C G E G IC C GY GK CE S +
Sbjct: 417 VQVLPQCECRCRDQSRDRSLCHGKGFLECG----ICRCDTGYIGKNCECQTQGRSSQELE 472
Query: 1403 HGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCAKAGNH 1462
C+ D C G C+ +C+C +
Sbjct: 473 -------------GSCR------------KDNNSIICSGLGDCVC----GQCLCHT--SD 501
Query: 1463 RCDDECNTIACHFDGNDCSLGINPWINCTANINCWEVFMNGRCDEVCNNPQCL--FDGRD 1520
C D +C GR C +C F+G
Sbjct: 502 VPGKLIYGQYCECDTINCERYNGQVCGG-----------PGRGLCFCGKCRCHPGFEGSA 550
Query: 1521 CEKNLQPCNPIYDAYCQKHYANGHCDYSCNNAECN--WDGLDCEREPPSLADGAISIIVL 1578
C+ + + +G CN EC+ + C
Sbjct: 551 CQCERTTEGCLNPRRVE---CSGRGRCRCNVCECHSGYQLPLC----------------- 590
Query: 1579 MDMQMFKQNKVSFLRELGHELRATVRIKQEPTGHEMIYQHGGICTDHLNGYTCECQIGYT 1638
QE G C + + + G
Sbjct: 591 ----------------------------QECPGCPSPCGKYISCAE-----CLKFEKGPF 617
Query: 1639 GGYISLNMSTSTLGIICEINVPD-CLPGACHNNGTCVDKVGGFECRCPPGFVGSRWTDAE 1697
G C P L TC ++ C + + +
Sbjct: 618 GKN-------------CSAACPGLQLSNNPVKGRTCKERD---SEGCWVAYTLEQQDGMD 661
Query: 1698 CFS 1700
+
Sbjct: 662 RYL 664
Score = 38.2 bits (88), Expect = 0.031
Identities = 39/239 (16%), Positives = 57/239 (23%), Gaps = 54/239 (22%)
Query: 592 TATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGY 651
TA G + C D + C GF
Sbjct: 392 KVTATECIQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGI---- 447
Query: 652 RCDCPPGATGTHCELDS------------RNECYSNPCQHAGTCEDRIADYACYCLPMWN 699
C C G G +CE + R + S C G C C C
Sbjct: 448 -CRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDV 502
Query: 700 GKNCDLYDPLFRGGLGRDTKKQITSLSGFDFELEKEMEKCKQNNCRAKAGNHRCDDECNT 759
+ E + C++ N + G R C
Sbjct: 503 PGKLI-----------------------YGQYCECDTINCERYNGQVCGGPGRGLCFCGK 539
Query: 760 IACH--FDGNDCSLGINPW-INCTANINCWEVFMNGRCDEVCNNPQCL--FDGRDCEKN 813
CH F+G+ C + C +GR CN +C + C++
Sbjct: 540 CRCHPGFEGSACQCERTTEGCLNPRRVEC-----SGRGRCRCNVCECHSGYQLPLCQEC 593
>1aut_L Activated protein C; serine proteinase, plasma calcium binding,
glycoprotein, HYD hydrolase inhibitor complex, blood
clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1
g.3.11.1 PDB: 3f6u_L*
Length = 114
Score = 96.3 bits (240), Expect = 1e-23
Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 1241 LDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCE--ININECYSNPCRNGAKCVDGIN 1298
L+ ++ C G C D I + C C+ G G C+ ++ C + C++ +
Sbjct: 14 LEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVG 73
Query: 1299 RYSCECLPGYTGLHCETNINECASNPCANGGVCVD 1333
C C PGY + PC ++
Sbjct: 74 WRRCSCAPGYKLGDDLLQCHPAVKFPCGRPWKRME 108
Score = 95.9 bits (239), Expect = 2e-23
Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 3/108 (2%)
Query: 1078 TQGFTGPRCETN-VNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDID--ECASN 1134
++ G +C + + C G+C+D G+F C C G+ G C+ ++ C+ +
Sbjct: 1 SKHVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLD 60
Query: 1135 PCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKD 1182
C + + +C+C G+ + V PC +
Sbjct: 61 NGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPCGRPWKRME 108
Score = 93.2 bits (232), Expect = 2e-22
Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Query: 1353 SDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDID--ECGSNPCQHGGICTDH 1410
++ + C GTC DG+ F C C+ G+ G+ C+ ++ C + C +
Sbjct: 12 LPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEE 71
Query: 1411 LNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCID 1447
+ C C GY + + PC ++
Sbjct: 72 VGWRRCSCAPGYKLGDDLLQCHPAVKFPCGRPWKRME 108
Score = 92.1 bits (229), Expect = 5e-22
Identities = 23/98 (23%), Positives = 36/98 (36%), Gaps = 3/98 (3%)
Query: 1121 GTQCET-DIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQ--INIDDCVSSPCHNG 1177
G QC ++ ++ C G C D I +F C C G+ G CQ ++ +C
Sbjct: 6 GDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCT 65
Query: 1178 GICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRG 1215
C + + C C G+ + PC R
Sbjct: 66 HYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPCGRP 103
Score = 90.2 bits (224), Expect = 3e-21
Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 2/101 (1%)
Query: 938 GRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCL--INTDDCASFPCQNG 995
G C E +S C TC + GS+ C+C G+EGR C ++ +C+
Sbjct: 6 GDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCT 65
Query: 996 GTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATC 1036
CL+EVG C C G+ + PC
Sbjct: 66 HYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPCGRPWKR 106
Score = 87.5 bits (217), Expect = 2e-20
Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Query: 1159 GSHCQIN-IDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNIN--DCASNPC-HR 1214
G C + ++ +S C G C D I ++C+C +G+ G C+ ++ +C+ +
Sbjct: 6 GDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCT 65
Query: 1215 GECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCED 1257
C++ C+C PG+ Q PC + +
Sbjct: 66 HYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPCGRPWKRME 108
Score = 86.3 bits (214), Expect = 6e-20
Identities = 26/138 (18%), Positives = 44/138 (31%), Gaps = 33/138 (23%)
Query: 972 AKGYEGRDCLIN-TDDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCE--VDIDECSSN 1028
+K +G CL+ + + C GTC+D +G +SC C G+ G+ C+ V CS +
Sbjct: 1 SKHVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLD 60
Query: 1029 PCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCET 1088
C+ G C+C G+
Sbjct: 61 NGGCT------------------------------HYCLEEVGWRRCSCAPGYKLGDDLL 90
Query: 1089 NVNECESHPCQNDGSCLD 1106
+ PC ++
Sbjct: 91 QCHPAVKFPCGRPWKRME 108
Score = 85.9 bits (213), Expect = 7e-20
Identities = 23/103 (22%), Positives = 34/103 (33%), Gaps = 3/103 (2%)
Query: 1310 GLHCETN-INECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVD--ECASDPCLNG 1366
G C + ++ C G C+D I F C+C G+ C +V C+ D
Sbjct: 6 GDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCT 65
Query: 1367 GTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTD 1409
C + + C C PGY PC +
Sbjct: 66 HYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPCGRPWKRME 108
Score = 85.5 bits (212), Expect = 9e-20
Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 1/104 (0%)
Query: 258 GKNCEEN-IDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNG 316
G C ++ +LC TC+DGI +SC C + + G C+++V +
Sbjct: 6 GDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCT 65
Query: 317 ATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDR 360
C VG C C G+ D L C +++
Sbjct: 66 HYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPCGRPWKRMEK 109
Score = 82.5 bits (204), Expect = 1e-18
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Query: 152 AGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVN--ECESHPCQNDGSCLDDPGTFRC 209
S C GTC++ GSF+C+C G+ G C+ V+ C CL++ G RC
Sbjct: 18 CASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRC 77
Query: 210 VCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRE 242
C PGY + + P PC E
Sbjct: 78 S--CAPGYKLGDDLLQCHPAVKFPCGRPWKRME 108
Score = 76.7 bits (189), Expect = 1e-16
Identities = 24/98 (24%), Positives = 34/98 (34%), Gaps = 3/98 (3%)
Query: 905 LDPCVPNRCQHGARCTPSANFQDFACHCGVGWTGRYCNEDVDECQ-LSSPCRNGATCHNT 963
L+ + C C F+C C GW GR+C +V C
Sbjct: 14 LEHPCASLCCGHGTCIDGIG--SFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEE 71
Query: 964 NGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDE 1001
G C CA GY+ D L+ FPC +++
Sbjct: 72 VGWRRCSCAPGYKLGDDLLQCHPAVKFPCGRPWKRMEK 109
Score = 74.4 bits (183), Expect = 8e-16
Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 6/111 (5%)
Query: 174 TQGFTGPRCETN-VNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESK--YVPCD 230
++ G +C + + C G+C+D G+F C C G+ G+ C+ + ++ C
Sbjct: 1 SKHVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDC--RSGWEGRFCQREVSFLNCS 58
Query: 231 PSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMD 281
C E C C GY+ + C M+
Sbjct: 59 LDNGGCTHYCLEEVG-WRRCSCAPGYKLGDDLLQCHPAVKFPCGRPWKRME 108
Score = 72.8 bits (179), Expect = 3e-15
Identities = 20/93 (21%), Positives = 30/93 (32%), Gaps = 4/93 (4%)
Query: 32 CEIPVANSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCEL---QDHCASSPCRNGAV 88
C + + C GTC + ++C C G+ G C+ +C+
Sbjct: 9 CLVLPLEHPCASLCCGHGTCI-DGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHY 67
Query: 89 CTSLEDTYECDCAPGFVGQTCSEDIIECVDDPC 121
C C CAPG+ V PC
Sbjct: 68 CLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPC 100
Score = 69.4 bits (170), Expect = 5e-14
Identities = 21/136 (15%), Positives = 37/136 (27%), Gaps = 35/136 (25%)
Query: 69 GSQCELQ--DHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGEC 126
G QC + +H +S C C ++ CDC G+ G+ C ++ C
Sbjct: 6 GDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFL--------NC 57
Query: 127 FNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNV 186
+ C+ G C+C G+
Sbjct: 58 -------------------------SLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQC 92
Query: 187 NECESHPCQNDGSCLD 202
+ PC ++
Sbjct: 93 HPAVKFPCGRPWKRME 108
Score = 69.0 bits (169), Expect = 7e-14
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Query: 302 DVDECSIRP------SVCHNGATCTNSVGGFSCICVNGWTGPDCSLNID--DCAGAACFN 353
D D+C + P S+C TC + +G FSC C +GW G C + +C+
Sbjct: 5 DGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGC 64
Query: 354 GATCIDRVGSFYCQCTPGKTGLLCHLE-DACTSNPC 388
C++ VG C C PG L+ PC
Sbjct: 65 THYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPC 100
Score = 66.3 bits (162), Expect = 6e-13
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 6/89 (6%)
Query: 340 SLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLE---DACTSNPCHADAICDT 396
L ++ + C TCID +GSF C C G G C E C+ + C
Sbjct: 11 VLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLE 70
Query: 397 NPIINGSYTCSCASGYKGVNCSEDINECE 425
G CSCA GYK + +
Sbjct: 71 EV---GWRRCSCAPGYKLGDDLLQCHPAV 96
Score = 62.8 bits (153), Expect = 9e-12
Identities = 19/88 (21%), Positives = 29/88 (32%), Gaps = 4/88 (4%)
Query: 601 NGGVCTALDGGHTCICPDNYSGRNCEYF--GYDCDSNPCQNGGFCRSKEGGGYRCDCPPG 658
G C G +C C + GR C+ +C + +C + G RC C PG
Sbjct: 24 GHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEV-GWRRCSCAPG 82
Query: 659 ATGTHCELDSRNECYSNPCQHAGTCEDR 686
L + PC ++
Sbjct: 83 YKLGDDLLQC-HPAVKFPCGRPWKRMEK 109
Score = 61.7 bits (150), Expect = 2e-11
Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 14/100 (14%)
Query: 380 EDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAF 439
+ ++ C C GS++C C SG++G C +++ C+
Sbjct: 14 LEHPCASLCCGHGTCIDGI---GSFSCDCRSGWEGRFCQREVSFLN-----------CSL 59
Query: 440 KPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNS 479
C++ V +C C Y D + P V
Sbjct: 60 DNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFP 99
Score = 58.2 bits (141), Expect = 3e-10
Identities = 16/75 (21%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 631 DCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELD-SRNECYSNPCQHAGTCEDRIAD 689
++ C G C G + CDC G G C+ + S C + C + +
Sbjct: 16 HPCASLCCGHGTCIDG-IGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGW 74
Query: 690 YACYCLPMWNGKNCD 704
C C P + +
Sbjct: 75 RRCSCAPGYKLGDDL 89
Score = 52.4 bits (126), Expect = 4e-08
Identities = 22/91 (24%), Positives = 29/91 (31%), Gaps = 8/91 (8%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPV-ANSCDSFPCMNGGTCTLKSLDRY 59
C GTC SF C C G+ C+ V +C C + +
Sbjct: 22 CCGHGTCIDGIG-----SFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCL-EEVGWR 75
Query: 60 TCTCAPGFTGSQCELQ-DHCASSPCRNGAVC 89
C+CAPG+ LQ PC
Sbjct: 76 RCSCAPGYKLGDDLLQCHPAVKFPCGRPWKR 106
Score = 50.9 bits (122), Expect = 1e-07
Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 11/75 (14%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
G C D + ++C+C+ G+ G + E++ +C C+++
Sbjct: 23 CGHGTCIDGIGSFSCDCRSGWEGRFCQR-----------EVSFLNCSLDNGGCTHYCLEE 71
Query: 1677 VGGFECRCPPGFVGS 1691
VG C C PG+
Sbjct: 72 VGWRRCSCAPGYKLG 86
Score = 50.5 bits (121), Expect = 2e-07
Identities = 21/140 (15%), Positives = 37/140 (26%), Gaps = 54/140 (38%)
Query: 420 DINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNS 479
D ++C + ++ C GTCID + ++ C C+ + G C +
Sbjct: 5 DGDQCL-----VLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQR--------- 50
Query: 480 ACVRCLTPGMIVIRSWILVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQ 539
E C + C++
Sbjct: 51 --------------------------------------EVSFLNCSLDNGGCTHY--CLE 70
Query: 540 LVNNYHCNCRPGYMGRHCEV 559
V C+C PGY +
Sbjct: 71 EVGWRRCSCAPGYKLGDDLL 90
Score = 50.1 bits (120), Expect = 3e-07
Identities = 21/127 (16%), Positives = 36/127 (28%), Gaps = 30/127 (23%)
Query: 520 DINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAPLT 579
+ ++ C HGT C+ + ++ C+CR G+ GR C+ + + + N
Sbjct: 13 PLEHPCASLCCGHGT--CIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGG------- 63
Query: 580 VLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQN 639
C G C C Y + + PC
Sbjct: 64 ---------------------CTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPCGR 102
Query: 640 GGFCRSK 646
K
Sbjct: 103 PWKRMEK 109
Score = 48.2 bits (115), Expect = 1e-06
Identities = 11/58 (18%), Positives = 21/58 (36%)
Query: 862 QQPINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARC 919
Q+ ++ +C+ C++ V +C C Y D + P V C +
Sbjct: 49 QREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPCGRPWKR 106
Score = 41.6 bits (98), Expect = 3e-04
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 661 GTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCD 704
G C + ++ C GTC D I ++C C W G+ C
Sbjct: 6 GDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQ 49
Score = 38.5 bits (90), Expect = 0.003
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 1657 INVPDCLPGACHNNGTCVDKVGGFECRCPPGFVGSR 1692
+ + C +GTC+D +G F C C G+ G
Sbjct: 12 LPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRF 47
Score = 34.7 bits (80), Expect = 0.066
Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 1424 GINCEIN-IDDCAFKPCRHGGTCIDLVNAYKCVCAKA-GNHRCDDECNTIACHFDGNDCS 1481
G C + ++ C GTCID + ++ C C C E + + C D C+
Sbjct: 6 GDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCT 65
Score = 34.3 bits (79), Expect = 0.089
Identities = 8/60 (13%), Positives = 14/60 (23%), Gaps = 13/60 (21%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
C + + C C GY G + + C ++K
Sbjct: 63 GCTHYCLEEVGWRRCSCAPGYKLGD-------------DLLQCHPAVKFPCGRPWKRMEK 109
Score = 29.3 bits (66), Expect = 4.4
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 1800 TERNGSYLCECAKGYEGRDCLINTDDCASY 1829
E G C CA GY+ D L+ +
Sbjct: 69 LEEVGWRRCSCAPGYKLGDDLLQCHPAVKF 98
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain,
disease mutation, extracellular matrix, polymorphism,
cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1
g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Length = 162
Score = 97.0 bits (242), Expect = 4e-23
Identities = 38/154 (24%), Positives = 54/154 (35%), Gaps = 7/154 (4%)
Query: 1088 TNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLIN 1147
T+VNEC G+C++ PG++ C C P F + S C
Sbjct: 1 TDVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNG 60
Query: 1148 TFKCACPIGFTGS--HCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETN-- 1203
C+ IG S C ++ +PC S C GF
Sbjct: 61 DTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILE 120
Query: 1204 -INDCASNP--CHRGECIDGENSFTCACHPGFTG 1234
I++C P C G+CI+ SF C C G+
Sbjct: 121 DIDECQELPGLCQGGKCINTFGSFQCRCPTGYYL 154
Score = 94.7 bits (236), Expect = 2e-22
Identities = 37/162 (22%), Positives = 54/162 (33%), Gaps = 11/162 (6%)
Query: 1126 TDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIA 1185
TD++EC G C + ++ C CP F + ++ D S C+ +
Sbjct: 1 TDVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNG 60
Query: 1186 GYTCECLAGF--TGMSCETNINDCASNPCHRG-ECIDGENSFTCACHPGFTGALCNTQL- 1241
C G + SC ++ PC E C GF L
Sbjct: 61 DTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILE 120
Query: 1242 --DECASNPCQ-FGGQCEDLINGYQCRCKPG----TSGTNCE 1276
DEC P GG+C + +QCRC G C+
Sbjct: 121 DIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD 162
Score = 93.6 bits (233), Expect = 6e-22
Identities = 41/185 (22%), Positives = 62/185 (33%), Gaps = 39/185 (21%)
Query: 944 DVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEVG 1003
DV+EC + C +G C NT GSY+C+C +E + D S C + G
Sbjct: 2 DVNECLDPTTCISG-NCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNG 60
Query: 1004 DYSCLCVDGF--SGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCE 1061
D +C G S C + + PC N
Sbjct: 61 DTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVN------------------------ 96
Query: 1062 HDGTCVNTPGSFACNCTQGFTGPRCETN---VNECES--HPCQNDGSCLDDPGTFRCVCM 1116
+ C +GF ++EC+ CQ G C++ G+F+C C
Sbjct: 97 ------TSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQCRCP 149
Query: 1117 PGFTG 1121
G+
Sbjct: 150 TGYYL 154
Score = 93.2 bits (232), Expect = 7e-22
Identities = 36/158 (22%), Positives = 57/158 (36%), Gaps = 9/158 (5%)
Query: 184 TNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCREL 243
T+VNEC G+C++ PG++ C C P + V C R
Sbjct: 1 TDVNECLDPTTCISGNCVNTPGSYICD--CPPDFELNPTRVGCVDTRSGNCYLDIRPRGD 58
Query: 244 DNLNYECECQSGYR--GKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCE- 300
+ + C + G +C ++ G C+ K C + +
Sbjct: 59 NG-DTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITV 117
Query: 301 --QDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTG 336
+D+DEC P +C G C N+ G F C C G+
Sbjct: 118 ILEDIDECQELPGLCQGG-KCINTFGSFQCRCPTGYYL 154
Score = 92.4 bits (230), Expect = 1e-21
Identities = 36/149 (24%), Positives = 50/149 (33%), Gaps = 10/149 (6%)
Query: 1063 DGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGT 1122
G CVNTPGS+ C+C F + S C D D G C G +
Sbjct: 14 SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVS 73
Query: 1123 --QCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQIN---IDDCVSSP-CHN 1176
C + + PC N C GF + + ID+C P
Sbjct: 74 KASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQ 133
Query: 1177 GGICKDSIAGYTCECLAGFT----GMSCE 1201
GG C ++ + C C G+ C+
Sbjct: 134 GGKCINTFGSFQCRCPTGYYLNEDTRVCD 162
Score = 89.3 bits (222), Expect = 2e-20
Identities = 33/153 (21%), Positives = 45/153 (29%), Gaps = 8/153 (5%)
Query: 1279 INECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGF 1338
+NEC CV+ Y C+C P + + S C
Sbjct: 3 VNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDT 62
Query: 1339 KCECPRGYY--DARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGY----GGKRCEFD 1392
C G A C + + PC + +C G+ E D
Sbjct: 63 ACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILE-D 121
Query: 1393 IDECGSNPCQ-HGGICTDHLNGYTCECQIGYTG 1424
IDEC P GG C + + C C GY
Sbjct: 122 IDECQELPGLCQGGKCINTFGSFQCRCPTGYYL 154
Score = 88.6 bits (220), Expect = 3e-20
Identities = 32/172 (18%), Positives = 53/172 (30%), Gaps = 23/172 (13%)
Query: 302 DVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRV 361
DV+EC + C N+ G + C C + + D C+
Sbjct: 2 DVNECLDPTTCIS--GNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDN 59
Query: 362 GSFYCQCTPGKTGL---LCHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCS 418
G C G C PC +T+ C G++ +
Sbjct: 60 GDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSE---YKILCPGGEGFRPNPIT 116
Query: 419 ---EDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHD 467
EDI+EC++ GG CI+ +++C C Y ++
Sbjct: 117 VILEDIDECQELPGLC------------QGGKCINTFGSFQCRCPTGYYLNE 156
Score = 87.0 bits (216), Expect = 1e-19
Identities = 32/159 (20%), Positives = 47/159 (29%), Gaps = 10/159 (6%)
Query: 1242 DECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYS 1301
+EC G C + Y C C P + + S C + +
Sbjct: 4 NECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTA 63
Query: 1302 CECLPGY--TGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYY---DARCLSDVD 1356
C G + C ++ + PC C G+ L D+D
Sbjct: 64 CSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDID 123
Query: 1357 ECASDP-CLNGGTCEDGLNQFICHCKPGY----GGKRCE 1390
EC P GG C + F C C GY + C+
Sbjct: 124 ECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD 162
Score = 80.5 bits (199), Expect = 2e-17
Identities = 30/148 (20%), Positives = 48/148 (32%), Gaps = 6/148 (4%)
Query: 1315 TNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLN 1374
T++NEC G CV+ + C+CP + + S C
Sbjct: 1 TDVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNG 60
Query: 1375 QFICHCKPGYG--GKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEIN-- 1430
C + G G C + + PC+ C G+ +
Sbjct: 61 DTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILE 120
Query: 1431 -IDDCAFKPCR-HGGTCIDLVNAYKCVC 1456
ID+C P GG CI+ +++C C
Sbjct: 121 DIDECQELPGLCQGGKCINTFGSFQCRC 148
Score = 72.4 bits (178), Expect = 1e-14
Identities = 35/222 (15%), Positives = 48/222 (21%), Gaps = 75/222 (33%)
Query: 867 IDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQ 926
+++C G C++ +Y C C + +
Sbjct: 3 VNECLDPTTCISGNCVNTPGSYICDCPPDFELNPT------------------------- 37
Query: 927 DFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYE--GRDCLINT 984
C D C NG C G C +
Sbjct: 38 -----------RVGC-VDTRSG----NCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSL 81
Query: 985 DDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCE---VDIDECSSNPCHNGATCNQFQM 1041
PC+ C +GF DIDEC P
Sbjct: 82 GKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPG----------- 130
Query: 1042 IFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTG 1083
G C+NT GSF C C G+
Sbjct: 131 ------------------LCQGGKCINTFGSFQCRCPTGYYL 154
Score = 66.6 bits (163), Expect = 2e-12
Identities = 24/137 (17%), Positives = 38/137 (27%), Gaps = 9/137 (6%)
Query: 1353 SDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLN 1412
+DV+EC G C + +IC C P + + S C
Sbjct: 1 TDVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNG 60
Query: 1413 GYTCECQIGY--TGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCAK-----AGNHRCD 1465
C +IG + +C ++ PC C + +
Sbjct: 61 DTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILE 120
Query: 1466 D--ECNTIACHFDGNDC 1480
D EC + G C
Sbjct: 121 DIDECQELPGLCQGGKC 137
Score = 62.8 bits (153), Expect = 3e-11
Identities = 29/171 (16%), Positives = 44/171 (25%), Gaps = 46/171 (26%)
Query: 59 YTCTCAPGFTGSQCELQDH-CASSPCRNGAVCTSLEDTYECDCAPGFV--GQTCSEDIIE 115
Y C C P F + + S C C G +C + +
Sbjct: 24 YICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGK 83
Query: 116 CVDDPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQ 175
G+PCE + C +
Sbjct: 84 A-----------------------------------WGTPCEMCPAVNTSEYKILCPGGE 108
Query: 176 GFTGPRCETN---VNECES--HPCQNDGSCLDDPGTFRCVCMCEPGYTGQN 221
GF ++EC+ CQ G C++ G+F+C C GY
Sbjct: 109 GFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQCR--CPTGYYLNE 156
Score = 61.2 bits (149), Expect = 9e-11
Identities = 29/205 (14%), Positives = 48/205 (23%), Gaps = 64/205 (31%)
Query: 76 DHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGECFNTHGSYTF 135
+ C C + +Y CDC P F ++
Sbjct: 4 NECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDT--RSG-------------- 47
Query: 136 QMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGF--TGPRCETNVNECESHP 193
C D G AC+ G + C ++ + P
Sbjct: 48 -------------------NCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTP 88
Query: 194 CQNDGSCLDDPGTFRCVCMCEPGYTGQN----------CESKYVPCDPSPCQN--GGVCR 241
C+ + C G+ C+ C C N G
Sbjct: 89 CEMCPAVNTSEYKILCPGG--EGFRPNPITVILEDIDECQELPGLCQGGKCINTFGS--- 143
Query: 242 ELDNLNYECECQSGYR----GKNCE 262
++C C +GY + C+
Sbjct: 144 ------FQCRCPTGYYLNEDTRVCD 162
Score = 57.8 bits (140), Expect = 2e-09
Identities = 30/125 (24%), Positives = 40/125 (32%), Gaps = 10/125 (8%)
Query: 18 SFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGS---QCEL 74
S+ C CP F + + S C C+ G S C
Sbjct: 23 SYICDCPPDFELNPTRVGC-VDTRSGNCYLDIRPR-GDNGDTACSNEIGVGVSKASCCCS 80
Query: 75 QDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCS---EDIIECVDDP--CVHGECFNT 129
+PC + E C GF + EDI EC + P C G+C NT
Sbjct: 81 LGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINT 140
Query: 130 HGSYT 134
GS+
Sbjct: 141 FGSFQ 145
Score = 50.4 bits (121), Expect = 6e-07
Identities = 18/103 (17%), Positives = 26/103 (25%), Gaps = 4/103 (3%)
Query: 603 GVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPG--AT 660
G C G + C CP ++ D S C R G C G +
Sbjct: 15 GNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDN-GDTACSNEIGVGVS 73
Query: 661 GTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNC 703
C S + + PC+ C +
Sbjct: 74 KASCC-CSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPI 115
Score = 48.1 bits (115), Expect = 4e-06
Identities = 31/194 (15%), Positives = 48/194 (24%), Gaps = 42/194 (21%)
Query: 520 DINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAPLT 579
D+NECL G CV +Y C+C P + V +
Sbjct: 2 DVNECLDPTTCISGN--CVNTPGSYICDCPPDFELNPTRVGCVDT--------------- 44
Query: 580 VLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNY--SGRNCEYFGYDCDSNPC 637
+ + +G C S +C PC
Sbjct: 45 ---------------RSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPC 89
Query: 638 QNGGFCRSKEGGGYRCDCPPGATGTHCELDSR--NECYSNPCQ-HAGTCEDRIADYACYC 694
+ + E C G + +EC P G C + + C C
Sbjct: 90 EMCPAVNTSE-YKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRC 148
Query: 695 LP----MWNGKNCD 704
+ + CD
Sbjct: 149 PTGYYLNEDTRVCD 162
Score = 39.7 bits (93), Expect = 0.002
Identities = 8/75 (10%), Positives = 12/75 (16%), Gaps = 11/75 (14%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
C +IG C ++ C
Sbjct: 50 YLDIRPRGDNGDTACSNEIGVGVS-----------KASCCCSLGKAWGTPCEMCPAVNTS 98
Query: 1677 VGGFECRCPPGFVGS 1691
C GF +
Sbjct: 99 EYKILCPGGEGFRPN 113
Score = 37.7 bits (88), Expect = 0.012
Identities = 16/178 (8%), Positives = 24/178 (13%), Gaps = 71/178 (39%)
Query: 383 CTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCS---EDINECEQGINCEINIDDCAF 439
C C P GSY C C ++ D
Sbjct: 6 CLDPTTCISGNCVNTP---GSYICDCPPDFELNPTRVGCVDTRSG--------------- 47
Query: 440 KPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVRCLTPGMIVIRSWILVY 499
C C ++
Sbjct: 48 -NCYLDIRPRGDNGDTACSNEIGVGVS--------------------------------- 73
Query: 500 RTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHC 557
+ C + + PC C G+
Sbjct: 74 --------------KASCCCSLGKAWGTPCEMCPA--VNTSEYKILCPGGEGFRPNPI 115
Score = 35.0 bits (81), Expect = 0.084
Identities = 13/73 (17%), Positives = 21/73 (28%), Gaps = 13/73 (17%)
Query: 1620 GICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDKVGG 1679
G C + Y C+C + + + C D G C+ + G
Sbjct: 15 GNCVNTPGSYICDCPPDFEL---------NPTRVGCV----DTRSGNCYLDIRPRGDNGD 61
Query: 1680 FECRCPPGFVGSR 1692
C G S+
Sbjct: 62 TACSNEIGVGVSK 74
Score = 33.9 bits (78), Expect = 0.24
Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 11/76 (14%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICE-INVPDCLPGACHNNGTCVD 1675
+ C G+ + + +I E I+ LPG C G C++
Sbjct: 90 EMCPAVNTSEYKILCPGGEGFRP---------NPITVILEDIDECQELPGLCQG-GKCIN 139
Query: 1676 KVGGFECRCPPGFVGS 1691
G F+CRCP G+ +
Sbjct: 140 TFGSFQCRCPTGYYLN 155
Score = 30.4 bits (69), Expect = 3.7
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 1662 CLPGACHNNGTCVDKVGGFECRCPPGFVGS 1691
CL +G CV+ G + C CPP F +
Sbjct: 6 CLDPTTCISGNCVNTPGSYICDCPPDFELN 35
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix,
ankyrin repeat, gene regulation/signalling protein/DNA
complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Length = 373
Score = 99.6 bits (249), Expect = 4e-22
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 24/115 (20%)
Query: 1827 ASYLINADADINVP--------DNSGKTALHWAAAVNNIDAVNILLSH-GVNP------- 1870
A L+ A ++ G+TALH+AA V+N+ V L+ G N
Sbjct: 254 AKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDG 313
Query: 1871 --------REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+EG L+ A+ E D D R +A HH+IV + D
Sbjct: 314 KTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRC 368
Score = 69.2 bits (170), Expect = 4e-12
Identities = 24/169 (14%), Positives = 40/169 (23%), Gaps = 38/169 (22%)
Query: 1766 TTQRKRSHGITWFPEGFLRNNSGPRRQDDLSLENTERNGSYLCECAKGYEGRDCLINTDD 1825
T +R+ + W P EN E+N + L+
Sbjct: 6 TRKRRMINASVWMPPM----------------ENEEKNR---KNHQSITSSQHSLLE--- 43
Query: 1826 CASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE------------- 1872
ASY N + N + ++ P E
Sbjct: 44 -ASYDGYIKRQRNELQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEA 102
Query: 1873 -GSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPR 1920
GSY + + N H +R + + L H +
Sbjct: 103 AGSYAITEPITRESVNIIDPRH-NRTVLHWIASNSSAEKSEDLIVHEAK 150
Score = 66.9 bits (164), Expect = 2e-11
Identities = 22/112 (19%), Positives = 33/112 (29%), Gaps = 21/112 (18%)
Query: 1827 ASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP---------------R 1871
A I A AD+N D T L A V L+ G +P
Sbjct: 149 AKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAA 208
Query: 1872 EGSYGACKALLDNF---ANREITDHMDRLPRDVASERLHHD---IVRLLDEH 1917
+G +L++ + E D + + D +LL E
Sbjct: 209 NRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEK 260
Score = 65.7 bits (161), Expect = 5e-11
Identities = 20/119 (16%), Positives = 40/119 (33%), Gaps = 29/119 (24%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSH---GVNP----------- 1870
+YL+ A AD + + S ++ALH AAA + + +L+ +
Sbjct: 180 RLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTAL 239
Query: 1871 ----REGSYG---ACKALLDNFANREITDHMDRLPRD--------VASERLHHDIVRLL 1914
+ K L++ A + + A++ + IV+ L
Sbjct: 240 MIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYL 298
Score = 62.3 bits (152), Expect = 6e-10
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHG 1867
+ YLI A + D + TA A A N+ + V+I
Sbjct: 327 EVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCR 369
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease
mutation, craniosynostosis, extracellular matrix,
fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Length = 147
Score = 90.1 bits (224), Expect = 6e-21
Identities = 38/149 (25%), Positives = 54/149 (36%), Gaps = 17/149 (11%)
Query: 1090 VNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTF 1149
++ECES PC N G C + PG+F C C T +T E C I
Sbjct: 4 IDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVID----GRC 58
Query: 1150 KCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCET--NINDC 1207
+ S C ++ SPC C G++ + +I++C
Sbjct: 59 EININGATLKSQCCSSLGAAWGSPCTLC--------QVDPICGKGYSRIKGTQCEDIDEC 110
Query: 1208 ASNP--CHRGECIDGENSFTCACHPGFTG 1234
P C G C++ SF C C G T
Sbjct: 111 EVFPGVCKNGLCVNTRGSFKCQCPSGMTL 139
Score = 85.9 bits (213), Expect = 2e-19
Identities = 35/146 (23%), Positives = 53/146 (36%), Gaps = 15/146 (10%)
Query: 1204 INDCASNPCHRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQ 1263
I++C S+PC G C + SF C C T T E C +
Sbjct: 4 IDECESSPCINGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVID----GRCE 59
Query: 1264 CRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCET--NINECA 1321
T + C ++ + +PC + C GY+ + +I+EC
Sbjct: 60 ININGATLKSQCCSSLGAAWGSPCTLC--------QVDPICGKGYSRIKGTQCEDIDECE 111
Query: 1322 SNPCA-NGGVCVDLIDGFKCECPRGY 1346
P G+CV+ FKC+CP G
Sbjct: 112 VFPGVCKNGLCVNTRGSFKCQCPSGM 137
Score = 85.5 bits (212), Expect = 3e-19
Identities = 31/146 (21%), Positives = 50/146 (34%), Gaps = 15/146 (10%)
Query: 1127 DIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAG 1186
DIDEC S+PC+N G+C + +F C C T + + + C I
Sbjct: 3 DIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVID----GR 57
Query: 1187 YTCECLAGFTGMSCETNINDCASNPCHRGECIDGENSFTCACHPGFTGALCNT--QLDEC 1244
C +++ +PC C G++ +DEC
Sbjct: 58 CEININGATLKSQCCSSLGAAWGSPCTLC-------QVDPICGKGYSRIKGTQCEDIDEC 110
Query: 1245 ASNPCQ-FGGQCEDLINGYQCRCKPG 1269
P G C + ++C+C G
Sbjct: 111 EVFPGVCKNGLCVNTRGSFKCQCPSG 136
Score = 80.9 bits (200), Expect = 1e-17
Identities = 30/146 (20%), Positives = 45/146 (30%), Gaps = 16/146 (10%)
Query: 1242 DECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYS 1301
DEC S+PC G C++ + C C ++ + E C R
Sbjct: 5 DECESSPCI-NGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVID----GRCE 59
Query: 1302 CECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGY--YDARCLSDVDECA 1359
C +++ +PC C +GY D+DEC
Sbjct: 60 ININGATLKSQCCSSLGAAWGSPCTLCQ--------VDPICGKGYSRIKGTQCEDIDECE 111
Query: 1360 SDPCL-NGGTCEDGLNQFICHCKPGY 1384
P + G C + F C C G
Sbjct: 112 VFPGVCKNGLCVNTRGSFKCQCPSGM 137
Score = 80.1 bits (198), Expect = 2e-17
Identities = 39/180 (21%), Positives = 57/180 (31%), Gaps = 46/180 (25%)
Query: 1021 DIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQG 1080
DIDEC S+PC NG C N+PGSF C C+
Sbjct: 3 DIDECESSPCING-------------------------------VCKNSPGSFICECSSE 31
Query: 1081 FTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGG 1140
T +T E C G +QC + + +PC
Sbjct: 32 STLDPTKTICIETIKGTCWQTVID----GRCEININGATLKSQCCSSLGAAWGSPCTLCQ 87
Query: 1141 ICNDLINTFKCACPIGFTGSHCQ--INIDDCVSSP-CHNGGICKDSIAGYTCECLAGFTG 1197
C G++ +ID+C P G+C ++ + C+C +G T
Sbjct: 88 --------VDPICGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTL 139
Score = 79.7 bits (197), Expect = 2e-17
Identities = 45/185 (24%), Positives = 55/185 (29%), Gaps = 53/185 (28%)
Query: 152 AGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVC 211
SPC + G C N+PGSF C C+ T +T E C RC
Sbjct: 8 ESSPCIN-GVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQ------TVIDGRCEI 60
Query: 212 MCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGN 271
C S SPC + C GY
Sbjct: 61 NINGATLKSQCCSSLGAAWGSPCTLCQ---------VDPICGKGYSR------------- 98
Query: 272 LCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICV 331
G C +D+DEC + P VC NG C N+ G F C C
Sbjct: 99 --IKGTQC---------------------EDIDECEVFPGVCKNG-LCVNTRGSFKCQCP 134
Query: 332 NGWTG 336
+G T
Sbjct: 135 SGMTL 139
Score = 79.7 bits (197), Expect = 3e-17
Identities = 34/168 (20%), Positives = 49/168 (29%), Gaps = 31/168 (18%)
Query: 302 DVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRV 361
D+DEC P + C NS G F C C + T + C+ V
Sbjct: 3 DIDECESSPCING---VCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQT------V 53
Query: 362 GSFYCQCTPGKTGLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCS--E 419
C+ S C + +P C GY + + E
Sbjct: 54 IDGRCEININ--------GATLKSQCCSSLGAAWGSPCTLCQVDPICGKGYSRIKGTQCE 105
Query: 420 DINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHD 467
DI+ECE G C++ ++KC C T
Sbjct: 106 DIDECEVFPG------------VCKNGLCVNTRGSFKCQCPSGMTLDA 141
Score = 78.2 bits (193), Expect = 1e-16
Identities = 37/183 (20%), Positives = 59/183 (32%), Gaps = 47/183 (25%)
Query: 942 NEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDE 1001
+ D+DEC+ SSPC NG C N+ GS++CEC+ + C
Sbjct: 1 SADIDECE-SSPCING-VCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVID--- 55
Query: 1002 VGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCE 1061
G C + +PC
Sbjct: 56 -GRCEININGATLKSQCCSSLGAAWGSPC------------------------------- 83
Query: 1062 HDGTCVNTPGSFACNCTQGFTGPRCET--NVNECESHPCQ-NDGSCLDDPGTFRCVCMPG 1118
T C +G++ + +++ECE P +G C++ G+F+C C G
Sbjct: 84 -------TLCQVDPICGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSG 136
Query: 1119 FTG 1121
T
Sbjct: 137 MTL 139
Score = 77.8 bits (192), Expect = 1e-16
Identities = 35/148 (23%), Positives = 53/148 (35%), Gaps = 15/148 (10%)
Query: 1166 IDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRGECIDGENSFT 1225
ID+C SSPC NG +CK+S + CEC + T +T + C + +
Sbjct: 4 IDECESSPCING-VCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVI---DGRCE 59
Query: 1226 CACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCE--ININECY 1283
+ + C + L +PC C G S +I+EC
Sbjct: 60 ININGATLKSQCCSSLGAAWGSPCTLC--------QVDPICGKGYSRIKGTQCEDIDECE 111
Query: 1284 SNPCR-NGAKCVDGINRYSCECLPGYTG 1310
P CV+ + C+C G T
Sbjct: 112 VFPGVCKNGLCVNTRGSFKCQCPSGMTL 139
Score = 72.4 bits (178), Expect = 8e-15
Identities = 32/143 (22%), Positives = 48/143 (33%), Gaps = 16/143 (11%)
Query: 1317 INECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQF 1376
I+EC S+PC NG VC + F CEC + E C +
Sbjct: 4 IDECESSPCING-VCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVID----GRC 58
Query: 1377 ICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCE--INIDDC 1434
+ +C + +PC C GY+ I +ID+C
Sbjct: 59 EININGATLKSQCCSSLGAAWGSPCTLC--------QVDPICGKGYSRIKGTQCEDIDEC 110
Query: 1435 AFKPCR-HGGTCIDLVNAYKCVC 1456
P G C++ ++KC C
Sbjct: 111 EVFPGVCKNGLCVNTRGSFKCQC 133
Score = 67.4 bits (165), Expect = 5e-13
Identities = 27/152 (17%), Positives = 41/152 (26%), Gaps = 19/152 (12%)
Query: 867 IDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQ 926
ID+C PC +G C + ++ C C T + C
Sbjct: 4 IDECESSPCING-VCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVID------G 56
Query: 927 DFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCL--INT 984
+ C + T C KGY +
Sbjct: 57 RCEININGATLKSQCCSSLGAAW---------GSPCTLCQVDPICGKGYSRIKGTQCEDI 107
Query: 985 DDCASFPCQ-NGGTCLDEVGDYSCLCVDGFSG 1015
D+C FP G C++ G + C C G +
Sbjct: 108 DECEVFPGVCKNGLCVNTRGSFKCQCPSGMTL 139
Score = 63.1 bits (154), Expect = 2e-11
Identities = 33/152 (21%), Positives = 56/152 (36%), Gaps = 23/152 (15%)
Query: 76 DHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGECFNTHGSYTF 135
D C SSPC NG VC + ++ C+C+ + + + G C+ T
Sbjct: 5 DECESSPCING-VCKNSPGSFICECSSESTLDPT-----KTICIETIKGTCWQTVIDGRC 58
Query: 136 QMIFIFFTNQYSWFLIAGSPCEHDG----TCVNTPGSFACNCTQGFTGPRCET--NVNEC 189
++ T S C T C +G++ + +++EC
Sbjct: 59 EININGATL--------KSQCCSSLGAAWGSPCTLCQVDPICGKGYSRIKGTQCEDIDEC 110
Query: 190 ESHPCQ-NDGSCLDDPGTFRCVCMCEPGYTGQ 220
E P +G C++ G+F+C C G T
Sbjct: 111 EVFPGVCKNGLCVNTRGSFKCQ--CPSGMTLD 140
Score = 52.7 bits (127), Expect = 6e-08
Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 8/92 (8%)
Query: 1392 DIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLVNA 1451
DIDEC S+PC +G +C + + CEC T + + C
Sbjct: 3 DIDECESSPCING-VCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVID------ 55
Query: 1452 YKCVCAKAGNHRCDDECNTIACHFDGNDCSLG 1483
+C G C+++ G+ C+L
Sbjct: 56 GRCEININGATLKSQCCSSLGAA-WGSPCTLC 86
Score = 49.3 bits (118), Expect = 8e-07
Identities = 27/122 (22%), Positives = 34/122 (27%), Gaps = 19/122 (15%)
Query: 18 SFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCELQ-D 76
SF C C + + C R SQC
Sbjct: 23 SFICECSSESTLDPTKTICIE-TIKGTCWQTVIDG-----RCEININGATLKSQCCSSLG 76
Query: 77 HCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCS--EDIIECVDDP--CVHGECFNTHGS 132
SPC + C G+ + EDI EC P C +G C NT GS
Sbjct: 77 AAWGSPCTLC--------QVDPICGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGS 128
Query: 133 YT 134
+
Sbjct: 129 FK 130
Score = 46.6 bits (111), Expect = 8e-06
Identities = 33/192 (17%), Positives = 46/192 (23%), Gaps = 56/192 (29%)
Query: 520 DINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAPLT 579
DI+EC S+PC + C ++ C C + +
Sbjct: 3 DIDECESSPCING---VCKNSPGSFICECSSESTLDPTKTICIET--------------- 44
Query: 580 VLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQN 639
G C C N + + C S
Sbjct: 45 ---------------------IKGTCWQTVIDGRCEININGATLKSQ----CCSSLGAAW 79
Query: 640 GGFCRSKEGGGYRCDCPPG---ATGTHCELDSRNECYSNPCQHA-GTCEDRIADYACYCL 695
G C C G GT CE +EC P G C + + C C
Sbjct: 80 GSPC---TLCQVDPICGKGYSRIKGTQCE--DIDECEVFPGVCKNGLCVNTRGSFKCQCP 134
Query: 696 P----MWNGKNC 703
G+ C
Sbjct: 135 SGMTLDATGRIC 146
Score = 33.1 bits (76), Expect = 0.33
Identities = 24/128 (18%), Positives = 40/128 (31%), Gaps = 29/128 (22%)
Query: 434 IDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVRCLTPGMIVIR 493
ID+C PC +G C + ++ C C T + + C + + G
Sbjct: 4 IDECESSPCING-VCKNSPGSFICECSSESTLDPTKTICIETIKGT-CWQTVIDG----- 56
Query: 494 SWILVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYM 553
R I+ + S+C + +PC+ + C GY
Sbjct: 57 ---------RCEININGATLKSQCCSSLGAAWGSPCT----------LCQVDPICGKGYS 97
Query: 554 ---GRHCE 558
G CE
Sbjct: 98 RIKGTQCE 105
Score = 31.9 bits (73), Expect = 0.78
Identities = 18/71 (25%), Positives = 25/71 (35%), Gaps = 12/71 (16%)
Query: 1622 CTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPG-ACHNNGTCVDKVGGF 1680
L C GY+ G CE ++ +C NG CV+ G F
Sbjct: 81 SPCTLCQVDPICGKGYSRIK----------GTQCE-DIDECEVFPGVCKNGLCVNTRGSF 129
Query: 1681 ECRCPPGFVGS 1691
+C+CP G
Sbjct: 130 KCQCPSGMTLD 140
Score = 30.0 bits (68), Expect = 3.4
Identities = 16/84 (19%), Positives = 26/84 (30%), Gaps = 13/84 (15%)
Query: 1620 GICTDHLNGYTCECQIGYTGG-----YISLNMSTSTLGI---ICEINVPDCLPGA--CHN 1669
G+C + + CEC T I T + CEIN+ + C +
Sbjct: 15 GVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSS 74
Query: 1670 NG---TCVDKVGGFECRCPPGFVG 1690
G + + C G+
Sbjct: 75 LGAAWGSPCTLCQVDPICGKGYSR 98
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo
sapiens}
Length = 426
Score = 89.9 bits (222), Expect = 1e-18
Identities = 31/153 (20%), Positives = 46/153 (30%), Gaps = 13/153 (8%)
Query: 1161 HCQINIDDCVSSPCHN-GGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRGECID 1219
+ +I C+ +C + TCEC TG C + P G +
Sbjct: 286 YAISDIKVRGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLP 345
Query: 1220 GENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEINI 1279
AC P + N +E CQ GG C N +C C +G CE
Sbjct: 346 IPKGAANACIPSISSIGTNVCDNEL--LHCQNGGTC---HNNVRCLCPAAYTGILCE--- 397
Query: 1280 NECYSNPCRNGAKCVDGINRYSCECLPGYTGLH 1312
+ C C + + + H
Sbjct: 398 -KL---RCEEAGSCGSDSGQGAPPHGTHHHHHH 426
Score = 81.4 bits (200), Expect = 7e-16
Identities = 32/170 (18%), Positives = 45/170 (26%), Gaps = 16/170 (9%)
Query: 1259 INGYQCRCKPGTSGTNCEININECYSNPCRNGA-KCVDGINRYSCECLPGYTGLHCETNI 1317
+ +I C A CV ++ +CEC TG C
Sbjct: 271 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCK 330
Query: 1318 NECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFI 1377
P + G + + G C +E C NGGTC +
Sbjct: 331 KNYQGRPWSPGS-YLPIPKGAANACIPSISSIGTNVCDNELL--HCQNGGTCHNN---VR 384
Query: 1378 CHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINC 1427
C C Y G CE + C+ G C G +
Sbjct: 385 CLCPAAYTGILCE----KL---RCEEAGSCGSDSGQGAPPH--GTHHHHH 425
Score = 78.7 bits (193), Expect = 4e-15
Identities = 32/152 (21%), Positives = 41/152 (26%), Gaps = 14/152 (9%)
Query: 1312 HCETNINECASNPCAN-GGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCE 1370
+ ++I C VCV CEC C P + G+
Sbjct: 286 YAISDIKVRGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPW-SPGSYL 344
Query: 1371 DGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEIN 1430
C P +E CQ+GG C N C C YTGI CE
Sbjct: 345 PIPKGAANACIPSISSIGTNVCDNELL--HCQNGGTC---HNNVRCLCPAAYTGILCE-- 397
Query: 1431 IDDCAFKPCRHGGTCIDLVNAYKCVCAKAGNH 1462
C G+C +H
Sbjct: 398 --KLR---CEEAGSCGSDSGQGAPPHGTHHHH 424
Score = 77.2 bits (189), Expect = 2e-14
Identities = 31/178 (17%), Positives = 46/178 (25%), Gaps = 17/178 (9%)
Query: 201 LDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKN 260
L P S C DN CEC+ G +
Sbjct: 266 LLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCNLHATVCVYDNSKLTCECEHNTTGPD 325
Query: 261 CEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCT 320
C + + G G + + + C+ + + +E C NG TC
Sbjct: 326 CGKCKKNYQGRPWSPG-SYLPIPKGAANACIPSISSIGTNVCDNEL----LHCQNGGTCH 380
Query: 321 NSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCH 378
N C+C +TG C + C +C G G H
Sbjct: 381 N---NVRCLCPAAYTGILC----EKL---RCEEAGSCGSDSGQ--GAPPHGTHHHHHH 426
Score = 73.3 bits (179), Expect = 3e-13
Identities = 33/154 (21%), Positives = 47/154 (30%), Gaps = 19/154 (12%)
Query: 866 NIDDCAFKPCR-HGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSAN 924
+I C H C+ + C C+ TG DC + G +
Sbjct: 290 DIKVRGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPG---SYLPI 346
Query: 925 FQDFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINT 984
+ A C + N +E C+NG TCHN C C Y G C
Sbjct: 347 PKGAANACIPSISSIGTNVCDNEL---LHCQNGGTCHNN---VRCLCPAAYTGILC---- 396
Query: 985 DDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHC 1018
+ C+ G+C + G G H
Sbjct: 397 EKLR---CEEAGSCGSDSG--QGAPPHGTHHHHH 425
Score = 72.2 bits (176), Expect = 6e-13
Identities = 32/184 (17%), Positives = 48/184 (26%), Gaps = 46/184 (25%)
Query: 980 CLINTDDCASFPCQN-GGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQ 1038
+ + C C+ + +C C +G C P G
Sbjct: 287 AISDIKVRGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPG----- 341
Query: 1039 FQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPC 1098
+ + P A C + NE C
Sbjct: 342 --------------------------SYLPIPKGAANACIPSISSIGTNVCDNELL--HC 373
Query: 1099 QNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFT 1158
QN G+C RC+C +TG CE + C G C ++ + A P G
Sbjct: 374 QNGGTCH---NNVRCLCPAAYTGILCE----KLR---CEEAGSCGS--DSGQGAPPHGTH 421
Query: 1159 GSHC 1162
H
Sbjct: 422 HHHH 425
Score = 63.3 bits (153), Expect = 4e-10
Identities = 29/148 (19%), Positives = 39/148 (26%), Gaps = 15/148 (10%)
Query: 76 DHCASSPCRNGA-VCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGECFNTHGSYT 134
C A VC C+C G C + P G
Sbjct: 292 KVRGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAA 351
Query: 135 FQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPC 194
I + + C++ GTC N C C +TG CE + C
Sbjct: 352 NACIPSISSIGTNVCDNELLHCQNGGTCHNN---VRCLCPAAYTGILCE----KLR---C 401
Query: 195 QNDGSCLDDPGTFRCVCMCEPGYTGQNC 222
+ GSC D G G +
Sbjct: 402 EEAGSCGSDSGQ----GAPPHGTHHHHH 425
Score = 62.6 bits (151), Expect = 6e-10
Identities = 40/205 (19%), Positives = 55/205 (26%), Gaps = 46/205 (22%)
Query: 492 IRSWILVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPG 551
+R +L + +D DI C+ H T+ CV + C C
Sbjct: 262 LRIRLLRPAVGEIFVDELHLARYFYAISDIKVRGRCKCNLHATV-CVYDNSKLTCECEHN 320
Query: 552 YMGRHCEVKDLAVKVTSMNASPTLAPLTVLWIAYNWSTTTTATAALATWNGGVCTALDGG 611
G C + P W+ G + G
Sbjct: 321 TTGPDCGKC-----KKNYQGRP--------------------------WSPGSYLPIPKG 349
Query: 612 HTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNE 671
C + S D + CQNGG C RC CP TG CE +
Sbjct: 350 AANACIPSISSIGTNV--CDNELLHCQNGGTCH----NNVRCLCPAAYTGILCE-----K 398
Query: 672 CYSNPCQHAGTCEDRIADYACYCLP 696
C+ AG+C A
Sbjct: 399 L---RCEEAGSCGSDSGQGAPPHGT 420
Score = 60.6 bits (146), Expect = 3e-09
Identities = 25/171 (14%), Positives = 42/171 (24%), Gaps = 31/171 (18%)
Query: 299 CEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCI 358
D+ + C +C C + TGPDC + G + + +
Sbjct: 287 AISDIKVRGRCKC-NLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPW-SPGSYL 344
Query: 359 DRVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCS 418
C P + + ++ D C C + C C + Y G+ C
Sbjct: 345 PIPKGAANACIPSISSIGTNVCD-NELLHCQNGGTCH------NNVRCLCPAAYTGILC- 396
Query: 419 EDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCH 469
+ C G+C H H
Sbjct: 397 ---EKLR----------------CEEAGSCGSDSGQGAPPHGT--HHHHHH 426
Score = 56.4 bits (135), Expect = 5e-08
Identities = 25/170 (14%), Positives = 45/170 (26%), Gaps = 16/170 (9%)
Query: 1323 NPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHC-- 1380
+ + ++ D F + L + + + T D + +
Sbjct: 214 YTTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDT-TKKLRDFFTVTDLRIRLLRPAVG 272
Query: 1381 ------KPGYGGKRCEFDIDECGSNPCQ-HGGICTDHLNGYTCECQIGYTGINCEINIDD 1433
DI G C H +C + TCEC+ TG +C +
Sbjct: 273 EIFVDELHLARYFYAISDIKVRGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKN 332
Query: 1434 CAFKPCRHGGTCIDLVNAYKCVCAKAGNHRCDDECNTIACHFDGNDCSLG 1483
+P G+ + + C T C + C G
Sbjct: 333 YQGRPWSP-GSYLPIPKGAANAC-----IPSISSIGTNVCDNELLHCQNG 376
Score = 56.4 bits (135), Expect = 5e-08
Identities = 22/104 (21%), Positives = 35/104 (33%), Gaps = 8/104 (7%)
Query: 601 NGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGAT 660
+ VC + TC C N +G +C + P G + G C P +
Sbjct: 302 HATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPI--PKGAANACIPSIS 359
Query: 661 GTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCD 704
+ CQ+ GTC + + C C + G C+
Sbjct: 360 SIGTN---VCDNELLHCQNGGTCHN---NVRCLCPAAYTGILCE 397
Score = 47.9 bits (113), Expect = 2e-05
Identities = 25/131 (19%), Positives = 38/131 (29%), Gaps = 24/131 (18%)
Query: 342 NIDDCAGAACFNGA-TCIDRVGSFYCQCTPGKTGLLC-HLEDACTSNPCHADAICDTNPI 399
+I C A C+ C+C TG C + P +
Sbjct: 290 DIKVRGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIP-- 347
Query: 400 INGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVC 459
+C + + NE C++GGTC N +C+C
Sbjct: 348 --KGAANACIPSISSIGTNVCDNELL---------------HCQNGGTCH---NNVRCLC 387
Query: 460 QVPYTGHDCHQ 470
YTG C +
Sbjct: 388 PAAYTGILCEK 398
Score = 46.0 bits (108), Expect = 1e-04
Identities = 11/73 (15%), Positives = 18/73 (24%), Gaps = 2/73 (2%)
Query: 632 CDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADYA 691
C + C+C TG C + P G+ A
Sbjct: 294 RGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKC-KKNYQGRPWSP-GSYLPIPKGAA 351
Query: 692 CYCLPMWNGKNCD 704
C+P + +
Sbjct: 352 NACIPSISSIGTN 364
Score = 45.6 bits (107), Expect = 1e-04
Identities = 29/151 (19%), Positives = 36/151 (23%), Gaps = 48/151 (31%)
Query: 514 GSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASP 573
G C P S G+ + + C P V D
Sbjct: 323 GPDCGKCKKNYQGRPWS-PGS--YLPIPKGAANACIPSISSIGTNVCD------------ 367
Query: 574 TLAPLTVLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCD 633
L NGG C C+CP Y+G CE
Sbjct: 368 --------------------NELLHCQNGGTC---HNNVRCLCPAAYTGILCE----KLR 400
Query: 634 SNPCQNGGFCRSKEGGGYRCDCPPGATGTHC 664
C+ G C S G + P G H
Sbjct: 401 ---CEEAGSCGSDSG---QGAPPHGTHHHHH 425
Score = 37.9 bits (87), Expect = 0.029
Identities = 19/179 (10%), Positives = 38/179 (21%), Gaps = 41/179 (22%)
Query: 379 LEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCA 438
+ D C + N TC C G +C +
Sbjct: 288 ISDIKVRGRCKCNLHATVCVYDNSKLTCECEHNT-------------TGPDCGKCKKNYQ 334
Query: 439 FKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVRCLTPGMIVIRSWILV 498
+P G + + + C + + + + C + +
Sbjct: 335 GRPWSPG-SYLPIPKGAANACIPSISSIGTNVCDNELLHCQNGGTCHNNVRCLCPA---- 389
Query: 499 YRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHC 557
+ G CE + C G+ ++ G H
Sbjct: 390 ------------AYTGILCE----KL---RCEEAGSCGS----DSGQGAPPHGTHHHHH 425
Score = 36.4 bits (83), Expect = 0.085
Identities = 23/144 (15%), Positives = 36/144 (25%), Gaps = 20/144 (13%)
Query: 416 NCSEDINECEQGINCEINIDDCAFKPCR-HGGTCIDLVNAYKCVCQVPYTGHDCHQKLDP 474
D + +I C H C+ + C C+ TG DC +
Sbjct: 273 EIFVDELHLARYFYAISDIKVRGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKN 332
Query: 475 CVPNSACVRCLTPGMIVIRSWILVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGT 534
+ + + S ++ + C + GT
Sbjct: 333 YQGRP-WSPGSYLPIPKGAANACIPS-------------ISSIGTNVCDNELLHCQNGGT 378
Query: 535 LDCVQLVNNYHCNCRPGYMGRHCE 558
NN C C Y G CE
Sbjct: 379 CH-----NNVRCLCPAAYTGILCE 397
Score = 34.0 bits (77), Expect = 0.44
Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 14/77 (18%)
Query: 866 NIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANF 925
N+ D C++GGTC N +C+C YTG C + RC+ C +
Sbjct: 364 NVCDNELLHCQNGGTCH---NNVRCLCPAAYTGILC----EKL---RCEEAGSCGSDSG- 412
Query: 926 QDFACHCGVGWTGRYCN 942
G + +
Sbjct: 413 ---QGAPPHGTHHHHHH 426
Score = 34.0 bits (77), Expect = 0.44
Identities = 13/75 (17%), Positives = 17/75 (22%), Gaps = 18/75 (24%)
Query: 1618 HGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDKV 1677
G G C + + + L C N GTC
Sbjct: 339 SPGSYLPIPKGAANACIPSISSIG-------------TNVCDNELLH--CQNGGTC---H 380
Query: 1678 GGFECRCPPGFVGSR 1692
C CP + G
Sbjct: 381 NNVRCLCPAAYTGIL 395
Score = 34.0 bits (77), Expect = 0.48
Identities = 13/82 (15%), Positives = 20/82 (24%), Gaps = 14/82 (17%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
H +C + TCEC+ TG C + G+ +
Sbjct: 301 LHATVCVYDNSKLTCECEHNTTGPD-------------CGKCKKNYQGRPWSP-GSYLPI 346
Query: 1677 VGGFECRCPPGFVGSRWTDAEC 1698
G C P +
Sbjct: 347 PKGAANACIPSISSIGTNVCDN 368
Score = 32.5 bits (73), Expect = 1.3
Identities = 15/73 (20%), Positives = 17/73 (23%), Gaps = 23/73 (31%)
Query: 1616 YQHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVD 1675
Q+GG C N C C YTG C C G+C
Sbjct: 373 CQNGGTC---HNNVRCLCPAAYTG--------------------ILCEKLRCEEAGSCGS 409
Query: 1676 KVGGFECRCPPGF 1688
G
Sbjct: 410 DSGQGAPPHGTHH 422
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET:
NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Length = 1245
Score = 90.7 bits (224), Expect = 4e-18
Identities = 48/354 (13%), Positives = 91/354 (25%), Gaps = 46/354 (12%)
Query: 1014 SGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSF 1073
++ + ID+ + + +S + G P E + +
Sbjct: 92 QFRNTTLFIDQVEAKWVEVKSKRRDM--------TVFSGLFVGGLPPELRAAALKLTLAS 143
Query: 1074 ACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECAS 1133
+ F G + V + P + LDD P G +E
Sbjct: 144 -VREREPFKGWIRDVRVQSSLALPVDSGEVKLDD-------EPPNSGGGSPCEAGEEGEG 195
Query: 1134 NPCLNGGICNDLINTFKCACP-IGFTGSHCQINIDDCVSSPCHNGGIC----KDSIAGYT 1188
CLNGG+C+ + + C C GF G C ++ +++ + C ++ I +
Sbjct: 196 GVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQGKEEYIATFKGSEYFCYDLSQNPIQSSS 255
Query: 1189 CECLAGFTGMSCETNINDCASNPCHRGECIDGENSFTCACHPGFTGALCNTQLDECASNP 1248
E F + + H G + A G + N +
Sbjct: 256 DEITLSFKTLQRNGLM-------LHTG---KSADYVNLALKNGAVSLVINLGSGAFEALV 305
Query: 1249 CQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGY 1308
G+ D K + I+++ + + + G
Sbjct: 306 EPVNGKFND---NAWHDVKVTRNLRQVTISVDGILTTTGYTQEDY-TMLGSDDFFYVGGS 361
Query: 1309 ------TGLHCETNINECASNPCANGGVCVDLI-----DGFKCECPRGYYDARC 1351
G N C + G G +C
Sbjct: 362 PSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKC 415
Score = 79.9 bits (196), Expect = 6e-15
Identities = 36/306 (11%), Positives = 70/306 (22%), Gaps = 44/306 (14%)
Query: 1259 INGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNIN 1318
+ R + G ++ + + P +G +D P G
Sbjct: 139 LTLASVREREPFKGWIRDVRVQSSLALPVDSGEVKLDD-------EPPNSGGGSPCEAGE 191
Query: 1319 ECASNPCANGGVCVDLIDGFKCECPR-GYYDARCLSDVDECASDPCLNGGTCEDGLNQFI 1377
E C NGGVC + D C+C R G+ C +E + + C D I
Sbjct: 192 EGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQGKEEYIATFKGSEYFCYDLSQNPI 251
Query: 1378 CHCKPG---------------YGGK------------RCEFDIDECGSNPCQHGGICTDH 1410
+ GK I+
Sbjct: 252 QSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGK 311
Query: 1411 LN-GYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDL-VNAYKCVCAKAGNHRCDDEC 1468
N + ++ I++D L + + V
Sbjct: 312 FNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSP 371
Query: 1469 NTIA-----CHFDGNDCSLGINPWINCTANINCWEVFMN--GRCDEVCNNPQCLFDGRDC 1521
+ + + + ++ +C+ V F+ +
Sbjct: 372 VSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPES 431
Query: 1522 EKNLQP 1527
+L
Sbjct: 432 FISLPK 437
Score = 79.5 bits (195), Expect = 8e-15
Identities = 41/311 (13%), Positives = 72/311 (23%), Gaps = 41/311 (13%)
Query: 929 ACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCA 988
+ + G + V L+ P +G L + G ++
Sbjct: 143 SVREREPFKGWIRDVRVQSS-LALPVDSGEVK-------LDDEPPNSGGGSPCEAGEEGE 194
Query: 989 SFPCQNGGTCLDEVGDYSCLCVD-GFSGKHCEVDIDECSSNPCHNGATC----------N 1037
C NGG C C C GF GK C +E + + C +
Sbjct: 195 GGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQGKEEYIATFKGSEYFCYDLSQNPIQSS 254
Query: 1038 QFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHP 1097
++ F T Q + ++ + G E+
Sbjct: 255 SDEITLSFKTLQRNGLML---------HTGKSADYVNLALKNGAVSLVINLGSGAFEALV 305
Query: 1098 CQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINT---FKCACP 1154
+G D+ Q +D + L + + P
Sbjct: 306 EPVNGKFNDN---AWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP 362
Query: 1155 --IGFTGSHCQINIDDCVSSPCHNGGICKDSIA-----GYTCECLAGFTGMSCETNINDC 1207
GS N C+ + + ++ G + G CE
Sbjct: 363 STADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLD 422
Query: 1208 ASNPCHRGECI 1218
I
Sbjct: 423 PITFETPESFI 433
Score = 67.6 bits (164), Expect = 4e-11
Identities = 33/295 (11%), Positives = 62/295 (21%), Gaps = 26/295 (8%)
Query: 163 VNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNC 222
V++ + G E E C N G C C C G+ G++C
Sbjct: 167 VDSGEVKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDC-SRTGFRGKDC 225
Query: 223 ESKYVPCDPSPCQNGGVC-RELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMD 281
+ + C N + K + N G + G
Sbjct: 226 SQGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRN-----GLMLHTG----- 275
Query: 282 GINKYSCLCLATYTGDL-CEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCS 340
+ LA G + ++ + V + +
Sbjct: 276 --KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFND---NAWHDVKVTRNLRQVT 330
Query: 341 LNIDDCAGAACFNG--ATCIDRVGSFYCQCTPGKTGLLCHLEDA----CTSNPCHADAIC 394
+++D + T + FY +P L C + +
Sbjct: 331 ISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDV 390
Query: 395 DTNPI--INGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGT 447
G C + + G+
Sbjct: 391 RLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKTGS 445
Score = 66.4 bits (161), Expect = 1e-10
Identities = 44/305 (14%), Positives = 76/305 (24%), Gaps = 47/305 (15%)
Query: 4 GGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYTCTC 63
G +R + F + ++ V S + P +G
Sbjct: 127 GLPPELRAAALKLTLASVREREPFKGWIRDVRV-QSSLALPVDSGEVKL-------DDEP 178
Query: 64 APGFTGSQCELQDHCASSPCRNGAVCTSLEDTYECDC-APGFVGQTCSEDIIECVDDPCV 122
GS CE + C NG VC+ ++D CDC GF G+ CS+ E +
Sbjct: 179 PNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQGKEEYIATFKG 238
Query: 123 HG-----ECFNTHGSYTFQMIFIFFTNQYSWFLI-AGSPCEH-----------------D 159
N S + ++ F T Q + ++ G ++
Sbjct: 239 SEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGS 298
Query: 160 GTCVNTPGSFA--------CNCTQGFTGPRCETNVNECESHPCQNDG--SCLD-DPGTFR 208
G + + +V+ + + L D +
Sbjct: 299 GAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYV 358
Query: 209 CVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCR----ELDNLNYECECQSGYRGKNCEEN 264
G + ++ C R L G CE
Sbjct: 359 GGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENV 418
Query: 265 IDDCP 269
P
Sbjct: 419 ATLDP 423
Score = 64.9 bits (157), Expect = 3e-10
Identities = 46/269 (17%), Positives = 73/269 (27%), Gaps = 27/269 (10%)
Query: 1250 QFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCEC-LPGY 1308
GQ +D+ + + G + C SNPC+N C DG NRY C+C GY
Sbjct: 590 FIDGQSKDIRQMAEVQSTAGVKPSCSRETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGY 649
Query: 1309 TGLHCETNINECASNPCANGGVCVDLID---------GFKCECPRGYYDARCLSDVDECA 1359
G CE + + + + ++ F+ + G A D +
Sbjct: 650 LGRSCEREATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTL 709
Query: 1360 SDPCLNG--------------GTCEDGLNQFICHC-KPGYGGKRCEFDIDECGSNPCQHG 1404
G LN H + GK + +D+ + Q
Sbjct: 710 RLELDAGRVKLTVNLGKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMA 769
Query: 1405 GICT--DHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCAKAGNH 1462
G T + N T + N +G IDL +
Sbjct: 770 GDHTRLEFHNIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNAR 829
Query: 1463 RCDDECNTIACHFDGNDCSLGINPWINCT 1491
F + + T
Sbjct: 830 FGFRNIIADPVTFKTKSSYVALATLQAYT 858
Score = 63.7 bits (154), Expect = 6e-10
Identities = 33/280 (11%), Positives = 60/280 (21%), Gaps = 49/280 (17%)
Query: 250 CECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIR 309
+ ++G + + +G +D S G+ E
Sbjct: 144 VREREPFKGWIRDVRVQSSLALPVDSGEVKLDDEPPNSGGGSPCEAGEEGE--------- 194
Query: 310 PSVCHNGATCTNSVGGFSCICVN-GWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQC 368
VC NG C+ C C G+ G DCS ++ + C D +
Sbjct: 195 GGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQGKEEYIATFKGSEYFCYDLSQNPIQSS 254
Query: 369 ---------TPGKTGLLCHLEDA------------------CTSNPCHADAICDTNPIIN 401
T + GL+ H + S A +
Sbjct: 255 SDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFND 314
Query: 402 GSYTCSCASGYKGVNCSEDINECE------QGINCEINIDDCAFKPCRHGGTCIDLVNAY 455
+ ++ Q + DD + G +
Sbjct: 315 N-AWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFY-----VGGSPSTADLP 368
Query: 456 KCVCQVPYTGHDCHQKLDPCVPNSACVRCLTPGMIVIRSW 495
+ G R G ++
Sbjct: 369 GSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIH 408
Score = 59.9 bits (144), Expect = 9e-09
Identities = 31/289 (10%), Positives = 75/289 (25%), Gaps = 48/289 (16%)
Query: 865 INIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSAN 924
+ + P G +D G + + C +G C+ +
Sbjct: 157 VRVQSSLALPVDSGEVKLDDEPPNSG-------GGSPCEAGEEGEGGVCLNGGVCSVVDD 209
Query: 925 FQDFACHC-GVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGR----- 978
C C G+ G+ C++ +E ++ + C++ + + + +
Sbjct: 210 --QAVCDCSRTGFRGKDCSQGKEEYI-ATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQ 266
Query: 979 -DCLI----NTDDCASFPCQNG----------GTCLDEVGDYSCLCVDG--------FSG 1015
+ L+ + D + +NG G V + D +
Sbjct: 267 RNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNL 326
Query: 1016 KHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFAC 1075
+ + +D + + +F + GSP D +F
Sbjct: 327 RQVTISVDGILTTTGYTQEDYTML--------GSDDFFYVGGSPSTADLPGSPVSNNF-M 377
Query: 1076 NCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQC 1124
C + + + + + F+C +
Sbjct: 378 GCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITF 426
Score = 56.0 bits (134), Expect = 1e-07
Identities = 38/259 (14%), Positives = 60/259 (23%), Gaps = 17/259 (6%)
Query: 1101 DGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACP-IGFTG 1159
DG D G + C SNPC N G+C D N + C C G+ G
Sbjct: 592 DGQSKDIRQMAEVQSTAGVKPSCSRETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLG 651
Query: 1160 SHCQINIDDCVSSPCHNGGI-CKDSIAGYTCECLAGFTGMSCETNINDCASNPCH---RG 1215
C+ I + + F + S R
Sbjct: 652 RSCEREATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRL 711
Query: 1216 ECIDGENSFTCACHPGFTGALCNTQLDECASNPCQF---GGQCEDLINGYQCRCKPGTSG 1272
E G T G L++ + + G + ++ Q +G
Sbjct: 712 ELDAGRVKLTVNLGKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQA-MTGQMAG 770
Query: 1273 TNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCV 1332
+ + + + RY + G N A G
Sbjct: 771 DHTRLEFHNIETGIITE--------RRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDID 822
Query: 1333 DLIDGFKCECPRGYYDARC 1351
+ D
Sbjct: 823 YCELNARFGFRNIIADPVT 841
Score = 56.0 bits (134), Expect = 1e-07
Identities = 33/246 (13%), Positives = 61/246 (24%), Gaps = 30/246 (12%)
Query: 969 CECAKGYEGRDCLINTDDCASFPCQNGGTCLDEVGDYSCLC-VDGFSGKHCEVDIDECSS 1027
+ G + C S PC+N G C D Y C C G+ G+ CE + S
Sbjct: 604 VQSTAGVKPSCSRETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSY 663
Query: 1028 NPC------HNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCV-----NTPGSFACN 1076
+ + + + + F +Q ++ ++ + + N
Sbjct: 664 DGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVN 723
Query: 1077 CTQGFTGPRCETNVNECESHPCQ-----NDGSC-LDDPGTFRCVCMPGFTGTQCETDIDE 1130
+G N+N+ E H + +DD T +
Sbjct: 724 LGKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFH----- 778
Query: 1131 CASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCE 1190
N + + P F G + + G
Sbjct: 779 -------NIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFG 831
Query: 1191 CLAGFT 1196
Sbjct: 832 FRNIIA 837
Score = 53.3 bits (127), Expect = 1e-06
Identities = 31/255 (12%), Positives = 65/255 (25%), Gaps = 25/255 (9%)
Query: 47 NGGTCTLKSLDRYTCTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTYECDC-APGFV 105
+G + ++ + T E C S+PC+N +C + Y CDC G++
Sbjct: 592 DGQSKDIRQMAEVQSTAG-VKPSCSRETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYL 650
Query: 106 GQTCSEDIIECVDDPCVHGECFNTHGSYTFQM-IFIFFTNQYSWFLIAGSPCEHDGTCV- 163
G++C + D + + +T + + F +Q ++ ++ + +
Sbjct: 651 GRSCEREATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLR 710
Query: 164 ----NTPGSFACNCTQGFTGPRCETNVNECESH----PCQNDGSCLDDPGTFRCVCMCEP 215
N +G N+N+ E H + L
Sbjct: 711 LELDAGRVKLTVNLGKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAG 770
Query: 216 GYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQN 275
+T + Y S + G +
Sbjct: 771 DHTRLEFHNIETGIITER-------------RYLSSVPSNFIGHLQSLTFNGMAYIDLCK 817
Query: 276 GATCMDGINKYSCLC 290
Sbjct: 818 NGDIDYCELNARFGF 832
Score = 51.4 bits (122), Expect = 3e-06
Identities = 36/250 (14%), Positives = 56/250 (22%), Gaps = 24/250 (9%)
Query: 158 HDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGY 217
DG + T G C S+PC+N+G C D + C C GY
Sbjct: 591 IDGQSKDIRQMAEVQSTAGVKPSCSRETAKPCLSNPCKNNGMCRDGWNRYVCDCSG-TGY 649
Query: 218 TGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYR----------------GKNC 261
G++CE + + + + +R
Sbjct: 650 LGRSCEREATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTL 709
Query: 262 EENIDDCPGNLCQNGATCMDGINKYSCLC-------LATYTGDLCEQDVDECSIRPSVCH 314
+D L N + + L G + VD+
Sbjct: 710 RLELDAGRVKLTVNLGKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMA 769
Query: 315 NGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTG 374
T + I N + FNG ID +
Sbjct: 770 GDHTRLEFHNIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNAR 829
Query: 375 LLCHLEDACT 384
A
Sbjct: 830 FGFRNIIADP 839
Score = 50.2 bits (119), Expect = 7e-06
Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 1389 CEFDIDECGSNPCQHGGICTDHLNGYTCEC-QIGYTGINCEINIDDCAFKPCR 1440
CE C + C + G+C +G++C+C ++G C F
Sbjct: 1013 CEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGG 1065
Score = 50.2 bits (119), Expect = 8e-06
Identities = 18/100 (18%), Positives = 30/100 (30%), Gaps = 13/100 (13%)
Query: 1227 ACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNP 1286
GF G L + L+ + C G CE C +
Sbjct: 977 HAKEGFQGCLASVDLNGRLPDLISDALFC------------NGQIERGCEGPSTTCQEDS 1024
Query: 1287 CRNGAKCVDGINRYSCEC-LPGYTGLHCETNINECASNPC 1325
C N C+ + +SC+C + ++G C +
Sbjct: 1025 CSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKG 1064
Score = 49.8 bits (118), Expect = 1e-05
Identities = 18/78 (23%), Positives = 24/78 (30%), Gaps = 3/78 (3%)
Query: 610 GGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCP-PGATGTHCELDS 668
P N G + G + + C NGG C + CDC G G C
Sbjct: 171 EVKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVD-DQAVCDCSRTGFRGKDCS-QG 228
Query: 669 RNECYSNPCQHAGTCEDR 686
+ E + C D
Sbjct: 229 KEEYIATFKGSEYFCYDL 246
Score = 49.5 bits (117), Expect = 1e-05
Identities = 34/241 (14%), Positives = 57/241 (23%), Gaps = 8/241 (3%)
Query: 429 NCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVRCLTPG 488
C PC++ G C D N Y C C + A V
Sbjct: 614 CSRETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCE-------REATVLSYDGS 666
Query: 489 MIVIRSWILVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNC 548
M + +V TE + + + + + LD ++ +
Sbjct: 667 MFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLGK 726
Query: 549 RPGYMGRHCEVKDLAVKVTSMNASPTLAPLTVLWIAYNWSTTTTATAALATWNGGVCTAL 608
P + + D + LTV L N
Sbjct: 727 GPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETGIIT 786
Query: 609 DGGHTCICPDNYSGRNCE-YFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELD 667
+ + P N+ G F + C+NG + + T
Sbjct: 787 ERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKS 846
Query: 668 S 668
S
Sbjct: 847 S 847
Score = 49.1 bits (116), Expect = 1e-05
Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 1118 GFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPI-GFTGSHCQINIDDCVSSPCH 1175
G CE C + C N G+C + F C C + F+G C + S
Sbjct: 1007 GQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGG 1065
Score = 49.1 bits (116), Expect = 2e-05
Identities = 30/274 (10%), Positives = 61/274 (22%), Gaps = 47/274 (17%)
Query: 876 RHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQDFACHC-GV 934
G D+ + + PC+ N C++ C N + C C G
Sbjct: 590 FIDGQSKDIRQMAEVQSTAGVKPSCSRETAKPCLSNPCKNNGMCRDGWN--RYVCDCSGT 647
Query: 935 GWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGY--EGRDCLI------NTDD 986
G+ GR C + + + + + + ++ ++ D
Sbjct: 648 GYLGRSCEREATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSAD 707
Query: 987 CASFPCQNG--------GTCLDEVGDYSCLCVDG--------FSGKHCEVDIDECSSNPC 1030
G G + + L D GK ++ +D+ +
Sbjct: 708 TLRLELDAGRVKLTVNLGKGPETLFAGYNLN-DNEWHTVRVVRRGKSLKLTVDDQQAMTG 766
Query: 1031 HNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNV 1090
+ + I + T + + F G
Sbjct: 767 QMAGDHTRLEFHNIET-------------------GIITERRYLSSVPSNFIGHLQSLTF 807
Query: 1091 NECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQC 1124
N +G R
Sbjct: 808 NGMAYIDLCKNGDIDYCELNARFGFRNIIADPVT 841
Score = 47.9 bits (113), Expect = 3e-05
Identities = 16/60 (26%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Query: 1078 TQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVC-MPGFTGTQCETDIDECASNPC 1136
G CE C+ C N G CL F C C M F+G C +
Sbjct: 1005 CNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKG 1064
Score = 47.5 bits (112), Expect = 5e-05
Identities = 14/45 (31%), Positives = 19/45 (42%)
Query: 1307 GYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARC 1351
G CE C + C+N GVC+ DGF C+C +
Sbjct: 1007 GQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPL 1051
Score = 47.5 bits (112), Expect = 5e-05
Identities = 13/63 (20%), Positives = 16/63 (25%), Gaps = 1/63 (1%)
Query: 1351 CLSDVDECASDPCLNGGTCEDGLNQFICHCK-PGYGGKRCEFDIDECGSNPCQHGGICTD 1409
C C D C N G C + F C C + G C +
Sbjct: 1013 CEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKW 1072
Query: 1410 HLN 1412
N
Sbjct: 1073 PPN 1075
Score = 47.1 bits (111), Expect = 6e-05
Identities = 20/131 (15%), Positives = 34/131 (25%), Gaps = 11/131 (8%)
Query: 270 GNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCI 329
G L + S + G + + V P +G + S
Sbjct: 126 GGLPPELRAAALKLTLASVREREPFKGWIRDVRVQSSLALP--VDSGEVKLDDEPPNSG- 182
Query: 330 CVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCT-PGKTGLLC-HLEDACTSNP 387
G ++ G C NG C C C+ G G C ++ +
Sbjct: 183 ------GGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQGKEEYIATF 236
Query: 388 CHADAICDTNP 398
++ C
Sbjct: 237 KGSEYFCYDLS 247
Score = 46.8 bits (110), Expect = 1e-04
Identities = 20/122 (16%), Positives = 34/122 (27%), Gaps = 14/122 (11%)
Query: 1170 VSSPCHNGGICKDSIAGY--TCECLAGFTGMSCETNINDCASNPCHRGECIDGENSFTCA 1227
+ S + GG+ K++ GF G ++N + +G+ C
Sbjct: 955 LKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCE 1014
Query: 1228 CHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCK-PGTSGTNCEININECYSNP 1286
C + C G C +G+ C C SG C +
Sbjct: 1015 GPS-----------TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSK 1063
Query: 1287 CR 1288
Sbjct: 1064 GG 1065
Score = 46.4 bits (109), Expect = 1e-04
Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 1156 GFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCEC-LAGFTGMSCETNINDCASNPCH 1213
G C+ C C N G+C G++C+C + F+G C +
Sbjct: 1007 GQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGG 1065
Score = 46.0 bits (108), Expect = 1e-04
Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Query: 977 GRDCLINTDDCASFPCQNGGTCLDEVGDYSCLC-VDGFSGKHCEVDIDECSSNPCH 1031
R C + C C N G CL + +SC C + FSG C +
Sbjct: 1010 ERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGG 1065
Score = 45.6 bits (107), Expect = 2e-04
Identities = 13/74 (17%), Positives = 22/74 (29%), Gaps = 1/74 (1%)
Query: 632 CDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADYA 691
+ + G + D P +G ++ E C + G C
Sbjct: 153 WIRDVRVQSSLALPVDSGEVKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAV 212
Query: 692 CYC-LPMWNGKNCD 704
C C + GK+C
Sbjct: 213 CDCSRTGFRGKDCS 226
Score = 44.8 bits (105), Expect = 4e-04
Identities = 14/81 (17%), Positives = 22/81 (27%), Gaps = 3/81 (3%)
Query: 1618 HGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDKV 1677
G I + +G + ++ G + G C N G C
Sbjct: 151 KGWIRDVRVQS--SLALPVDSGEVKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVD 208
Query: 1678 GGFECRCP-PGFVGSRWTDAE 1697
C C GF G + +
Sbjct: 209 DQAVCDCSRTGFRGKDCSQGK 229
Score = 44.4 bits (104), Expect = 4e-04
Identities = 31/274 (11%), Positives = 63/274 (22%), Gaps = 15/274 (5%)
Query: 507 DFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCR-PGYMGRHCEVKDLAVK 565
D G E C + G C + + C+C G+ G+ C
Sbjct: 176 DEPPNSGGGSPCEAGEEGEGGVCLNGGV--CSVVDDQAVCDCSRTGFRGKDCSQGKEEYI 233
Query: 566 VTSMNASPTLAPLTVLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNC 625
T + + S+ + G+ + +G
Sbjct: 234 ATFKGSE--YFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAV- 290
Query: 626 EYFGYDCDSNPCQ-NGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCE 684
+ S + K D + S + +
Sbjct: 291 -SLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTI-SVDGILTTTGYTQEDYT 348
Query: 685 DRIADYACYC--LPMWNGKNCDLYDPLFRGGLGRDTKKQITSLSGFDFELEKEMEKCKQN 742
+D Y P F G L K+ + + EL + ++
Sbjct: 349 MLGSDDFFYVGGSPSTADLPGSPVSNNFMGCL----KEVVYKNNDVRLELSRLAKQGDPK 404
Query: 743 NCRAKAGNHRCDDECNTIACHFDGNDCSLGINPW 776
+C++ F+ + + + W
Sbjct: 405 MKIHGVVAFKCENVATLDPITFETPESFISLPKW 438
Score = 44.1 bits (103), Expect = 5e-04
Identities = 15/62 (24%), Positives = 18/62 (29%), Gaps = 1/62 (1%)
Query: 174 TQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSP 233
G CE C+ C N G CL F C C ++G C S
Sbjct: 1005 CNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCS-MTSFSGPLCNDPGTTYIFSK 1063
Query: 234 CQ 235
Sbjct: 1064 GG 1065
Score = 44.1 bits (103), Expect = 6e-04
Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 429 NCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVP-YTGHDCHQKLDPCVPNSACVRC 484
CE C C + G C+ + + C C + ++G C+ + + +
Sbjct: 1012 GCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQI 1068
Score = 43.7 bits (102), Expect = 7e-04
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 216 GYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECEC-QSGYRGKNCEENIDDCPGNLCQ 274
G + CE C C N GVC + + + C+C + + G C + +
Sbjct: 1007 GQIERGCEGPSTTCQEDSCSNQGVCLQQWD-GFSCDCSMTSFSGPLCNDPGTTYIFSKGG 1065
Score = 43.3 bits (101), Expect = 0.001
Identities = 45/354 (12%), Positives = 91/354 (25%), Gaps = 43/354 (12%)
Query: 920 TPSANFQDFACHC-GVGWTGRYCNEDVDECQ-LSSPCRNGATCHNTNGSYLCECAKGYEG 977
N D H V G+ VD+ Q ++ T + +
Sbjct: 732 FAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETGIITERRYL 791
Query: 978 RDCLINTDDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGA--- 1034
N NG +D + + + I + + +
Sbjct: 792 SSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKSSYVAL 851
Query: 1035 ----TCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCV---NTPGSFACNCTQGFTGPRCE 1087
+ F F T ++ S +D V + + G +
Sbjct: 852 ATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGS 911
Query: 1088 TNVNECESHP-------CQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGG 1140
+N ++ ++ + G ++D+ GG
Sbjct: 912 SNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNLDLKSDLY--------IGG 963
Query: 1141 ICNDLINTF--KCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGM 1198
+ + + GF G ++++ + + C G
Sbjct: 964 VAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCN------------GQIER 1011
Query: 1199 SCETNINDCASNPC-HRGECIDGENSFTCAC-HPGFTGALCNTQLDECASNPCQ 1250
CE C + C ++G C+ + F+C C F+G LCN +
Sbjct: 1012 GCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGG 1065
Score = 42.5 bits (99), Expect = 0.002
Identities = 15/71 (21%), Positives = 21/71 (29%), Gaps = 2/71 (2%)
Query: 64 APGFTGSQCELQDH-CASSPCRNGAVCTSLEDTYECDC-APGFVGQTCSEDIIECVDDPC 121
G CE C C N VC D + CDC F G C++ +
Sbjct: 1005 CNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKG 1064
Query: 122 VHGECFNTHGS 132
+ +
Sbjct: 1065 GGQITYKWPPN 1075
Score = 41.8 bits (97), Expect = 0.003
Identities = 13/57 (22%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Query: 622 GRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQ 678
R CE C + C N G C + G+ CDC + D +
Sbjct: 1010 ERGCEGPSTTCQEDSCSNQGVCLQQ-WDGFSCDCSMTSFSGPLCNDPGTTYIFSKGG 1065
Score = 41.4 bits (96), Expect = 0.003
Identities = 11/82 (13%), Positives = 20/82 (24%)
Query: 1421 GYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCAKAGNHRCDDECNTIACHFDGNDC 1480
G CE C C + G C+ + + C C+ F
Sbjct: 1007 GQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGG 1066
Query: 1481 SLGINPWINCTANINCWEVFMN 1502
+ N + + +
Sbjct: 1067 QITYKWPPNDRPSTRADRLAIG 1088
Score = 41.0 bits (95), Expect = 0.004
Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 253 QSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLC-LATYTGDLCEQDVDEC 306
+G + CE C + C N C+ + +SC C + +++G LC
Sbjct: 1005 CNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTY 1059
Score = 41.0 bits (95), Expect = 0.005
Identities = 8/52 (15%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Query: 864 PINIDDCAFKPCRHGGTCIDLVNAYKCVCQVP-YTGHDCHQKLDPCVPNRCQ 914
C C + G C+ + + C C + ++G C+ + ++
Sbjct: 1014 EGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGG 1065
Score = 41.0 bits (95), Expect = 0.005
Identities = 14/78 (17%), Positives = 17/78 (21%), Gaps = 1/78 (1%)
Query: 602 GGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATG 661
G + C SNPC+N G CR Y CDC
Sbjct: 592 DGQSKDIRQMAEVQSTAGVKPSCSRETAKPCLSNPCKNNGMCRDGW-NRYVCDCSGTGYL 650
Query: 662 THCELDSRNECYSNPCQH 679
+
Sbjct: 651 GRSCEREATVLSYDGSMF 668
Score = 40.6 bits (94), Expect = 0.006
Identities = 11/59 (18%), Positives = 18/59 (30%), Gaps = 3/59 (5%)
Query: 897 TGHDCHQKLDPCVPNRCQHGARCTPSANFQDFACHC-GVGWTGRYCNEDVDECQLSSPC 954
C C + C + C + F+C C ++G CN+ S
Sbjct: 1009 IERGCEGPSTTCQEDSCSNQGVCLQQWD--GFSCDCSMTSFSGPLCNDPGTTYIFSKGG 1065
Score = 39.8 bits (92), Expect = 0.010
Identities = 15/68 (22%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Query: 332 NGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCT-PGKTGLLCHLEDACTSNPCHA 390
NG C C +C N C+ + F C C+ +G LC+
Sbjct: 1006 NGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGG 1065
Query: 391 DAICDTNP 398
I P
Sbjct: 1066 GQITYKWP 1073
Score = 39.8 bits (92), Expect = 0.012
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 1655 CEINVPDCLPGACHNNGTCVDKVGGFECRCP-PGFVG 1690
CE C +C N G C+ + GF C C F G
Sbjct: 1013 CEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSG 1049
Score = 39.4 bits (91), Expect = 0.015
Identities = 35/229 (15%), Positives = 53/229 (23%), Gaps = 41/229 (17%)
Query: 30 SLCEIPVANSCDSFPCMNGGTCTLKSLDRYTCTC-APGFTGSQCELQ------DHCASSP 82
C A C S PC N G C +RY C C G+ G CE + D
Sbjct: 612 PSCSRETAKPCLSNPCKNNGMCR-DGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMK 670
Query: 83 CRNGAVCTSLEDTYECDC----APGFVGQTCSEDIIECVDDPCVHG--ECFNTHGSYTFQ 136
+ V + + A G + T S D + + G + G
Sbjct: 671 IQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLGKGPET 730
Query: 137 MIFIFFTNQYSWFLI--------------------AGSPCEHDGTCVN-------TPGSF 169
+ + N W + +H + T +
Sbjct: 731 LFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETGIITERRY 790
Query: 170 ACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYT 218
+ F G N +G R
Sbjct: 791 LSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADP 839
Score = 39.1 bits (90), Expect = 0.021
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 664 CELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNC 703
C ++ C SNPC++ G C D Y C C
Sbjct: 614 CSRETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRS 653
Score = 38.7 bits (89), Expect = 0.023
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 513 IGSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCR-PGYMGRHC 557
I CEG C + CS+ G C+Q + + C+C + G C
Sbjct: 1009 IERGCEGPSTTCQEDSCSNQGV--CLQQWDGFSCDCSMTSFSGPLC 1052
Score = 38.7 bits (89), Expect = 0.025
Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 658 GATGTHCELDSRNECYSNPCQHAGTCEDRIADYACYC-LPMWNGKNC 703
G CE S C + C + G C + ++C C + ++G C
Sbjct: 1007 GQIERGCEGPS-TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLC 1052
Score = 38.7 bits (89), Expect = 0.027
Identities = 10/45 (22%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Query: 152 AGSPCEHDGTCVNTPGSFACNCTQ-GFTGPRCETNVNECESHPCQ 195
C + G C+ F+C+C+ F+GP C
Sbjct: 1021 QEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGG 1065
Score = 37.5 bits (86), Expect = 0.050
Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Query: 299 CEQDVDECSIRPSVCHNGATCTNSVGGFSCIC-VNGWTGPDCSLNIDDC 346
CE C C N C GFSC C + ++GP C+
Sbjct: 1013 CEGPSTTCQEDS--CSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTY 1059
Score = 37.1 bits (85), Expect = 0.065
Identities = 12/47 (25%), Positives = 14/47 (29%)
Query: 1655 CEINVPDCLPGACHNNGTCVDKVGGFECRCPPGFVGSRWTDAECFSN 1701
CL C NNG C D + C C R + E
Sbjct: 615 SRETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVL 661
Score = 37.1 bits (85), Expect = 0.067
Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Query: 38 NSCDSFPCMNGGTCTLKSLDRYTCTC-APGFTGSQCELQDHCASSPCRNGAVC 89
+C C N G C + D ++C C F+G C G +
Sbjct: 1018 TTCQEDSCSNQGVCL-QQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQIT 1069
Score = 34.8 bits (79), Expect = 0.37
Identities = 35/267 (13%), Positives = 60/267 (22%), Gaps = 49/267 (18%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCP-IGFSASLCEIPVANSCDSFPCMNGGTC---TLKSL 56
C NGG C+V C C GF C +F + C + +
Sbjct: 198 CLNGGVCSVVDD-----QAVCDCSRTGFRGKDCSQGKEEYIATF-KGSEYFCYDLSQNPI 251
Query: 57 DRYTCTCAPGFTGSQ-------CELQDHCASSPCRNGAVC------------------TS 91
+ F Q + +NGAV
Sbjct: 252 QSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGK 311
Query: 92 LEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLI 151
D D + + + + E + GS F F +
Sbjct: 312 FNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDF-------------FYV 358
Query: 152 AGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVC 211
GSP D +F C + + + + + F+C
Sbjct: 359 GGSPSTADLPGSPVSNNF-MGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCEN 417
Query: 212 MCEPGYTGQNCESKYVPCDPSPCQNGG 238
+ ++ + G
Sbjct: 418 VATLDPITFETPESFISLPKWNAKKTG 444
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating,
carbohydrate binding protein; 1.60A {Myxococcus xanthus}
PDB: 4fbv_A*
Length = 267
Score = 85.5 bits (211), Expect = 4e-18
Identities = 36/261 (13%), Positives = 68/261 (26%), Gaps = 54/261 (20%)
Query: 994 NGGTCLDEVGDYSCLCVDGFSGKHCEVDIDE------CSSNPCHNGATCNQFQMIFIFFT 1047
+GG L Y+ GF G + +S P G +
Sbjct: 42 DGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVW-------VLGA 94
Query: 1048 NQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNE------CESHPCQND 1101
+ G + ++ GF + + + P +
Sbjct: 95 RDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSG 154
Query: 1102 GSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSH 1161
G + GT+ + ++ +GG T+ PIGF G+
Sbjct: 155 GVWV--------------LGTRGKQNV-INVDAKSNDGGKTLSGTMTYNGEGPIGFRGTL 199
Query: 1162 CQINIDD------CVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRG 1215
+ ++P + GG + G +N +S+ G
Sbjct: 200 TSPDTYTVENQWGGSTAPWNPGG-----------FWMIGARNGQNVVALNVASSD---GG 245
Query: 1216 ECIDGENSFTCACHPGFTGAL 1236
+ + G + GF L
Sbjct: 246 KTLAGTMIYNGEGPIGFRARL 266
Score = 84.0 bits (207), Expect = 1e-17
Identities = 41/270 (15%), Positives = 75/270 (27%), Gaps = 66/270 (24%)
Query: 1138 NGGICNDLINTFKCACPIGFTGSHCQINIDD------CVSSPCHNGGICKDSIAGYTCEC 1191
+GG T+ PIGF G+ N S+P GG+
Sbjct: 42 DGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWV---------- 91
Query: 1192 LAGFTGMSCETNIND-CASNPCH-RGECIDGENSFTCACHPGFTGALCNTQLDE------ 1243
+ N S + G+ + G ++ GF + +
Sbjct: 92 ------LGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWG 145
Query: 1244 CASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCE 1303
++ P GG R K + + +G K + G Y+ E
Sbjct: 146 GSAAPWHSGGVWV-----LGTRGKQNVINVDAK----------SNDGGKTLSGTMTYNGE 190
Query: 1304 CLPGYTGLHCETNINE------CASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDE 1357
G+ G + ++ P GG + G + + + ++
Sbjct: 191 GPIGFRGTLTSPDTYTVENQWGGSTAPWNPGGFWMI-----------GARNGQNVVALNV 239
Query: 1358 CASDPCLNGGTCEDGLNQFICHCKPGYGGK 1387
+SD GG G + G+ +
Sbjct: 240 ASSD----GGKTLAGTMIYNGEGPIGFRAR 265
Score = 83.6 bits (206), Expect = 2e-17
Identities = 40/266 (15%), Positives = 70/266 (26%), Gaps = 62/266 (23%)
Query: 1063 DGTCVNTPGSFACNCTQGFTGPRCETNVNE------CESHPCQNDGSCLDDPGTFRCVCM 1116
G + ++ GF G N S P Q G + + +
Sbjct: 43 GGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIV- 101
Query: 1117 PGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDD------CV 1170
S +GG T+ PIGF +
Sbjct: 102 --------------AVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGS 147
Query: 1171 SSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRGECIDGENSFTCACHP 1230
++P H+GG+ G + N+ + + G+ + G ++
Sbjct: 148 AAPWHSGGVW--------------VLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPI 193
Query: 1231 GFTGALCNTQLDE------CASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYS 1284
GF G L + ++ P GG G + +N
Sbjct: 194 GFRGTLTSPDTYTVENQWGGSTAPWNPGGFWMI-----------GARNGQNVVALNV--- 239
Query: 1285 NPCRNGAKCVDGINRYSCECLPGYTG 1310
+G K + G Y+ E G+
Sbjct: 240 -ASSDGGKTLAGTMIYNGEGPIGFRA 264
Score = 73.6 bits (180), Expect = 4e-14
Identities = 32/223 (14%), Positives = 58/223 (26%), Gaps = 39/223 (17%)
Query: 955 RNGATCHNTNGSYLCECAKGYEGRDCLINTDD-----CASFPCQNGGTCLDEVGDYSCLC 1009
+ A + + A G ++ D S +GG L Y+
Sbjct: 65 LSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEG 124
Query: 1010 VDGFSGKHCEVDIDE------CSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHD 1063
GF + + D S+ P H+G + T + +
Sbjct: 125 PIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVW-------VLGTRGKQNVINVDAKSNDG 177
Query: 1064 GTCVNTPGSFACNCTQGFTGPRCETNVNE------CESHPCQNDGSCLDDPGTFRCVCMP 1117
G ++ ++ GF G + + P G +
Sbjct: 178 GKTLSGTMTYNGEGPIGFRGTLTSPDTYTVENQWGGSTAPWNPGGFWMI----------- 226
Query: 1118 GFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGS 1160
G Q ++ +S +GG + PIGF
Sbjct: 227 GARNGQNVVALNVASS----DGGKTLAGTMIYNGEGPIGFRAR 265
Score = 73.2 bits (179), Expect = 7e-14
Identities = 42/260 (16%), Positives = 67/260 (25%), Gaps = 63/260 (24%)
Query: 1215 GECIDGENSFTCACHPGFTGALCNTQLDE------CASNPCQFGGQCEDLINGYQCRCKP 1268
G+ + G ++ GF G L + S P Q GG
Sbjct: 44 GKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVW------------- 90
Query: 1269 GTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINE------CAS 1322
G + NI S +G K + G Y+ E G+ + + ++
Sbjct: 91 -VLGARDKQNI-VAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSA 148
Query: 1323 NPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKP 1382
P +GGV V R +V +GG G +
Sbjct: 149 APWHSGGVWV--------------LGTRGKQNV-INVDAKSNDGGKTLSGTMTYNGEGPI 193
Query: 1383 GYGGKRCEFDIDE------CGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDCAF 1436
G+ G D + P GG IG + ++ +
Sbjct: 194 GFRGTLTSPDTYTVENQWGGSTAPWNPGG-----------FWMIGARNGQNVVALNVAS- 241
Query: 1437 KPCRHGGTCIDLVNAYKCVC 1456
GG + Y
Sbjct: 242 ---SDGGKTLAGTMIYNGEG 258
Score = 62.8 bits (152), Expect = 2e-10
Identities = 36/253 (14%), Positives = 67/253 (26%), Gaps = 50/253 (19%)
Query: 18 SFWCSCPIGFSASLCEIPVAN-----SCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQC 72
++ PIGF +L S P GG L G++
Sbjct: 52 TYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVL---------------GARD 96
Query: 73 ELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGECFNTHGS 132
+ S +G + TY + GF + D + +++ G
Sbjct: 97 KQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGG- 155
Query: 133 YTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNE---- 188
+++ T + + G ++ ++ GF G +
Sbjct: 156 -----VWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSPDTYTVENQ 210
Query: 189 --CESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNL 246
+ P G + GQN + V +GG +
Sbjct: 211 WGGSTAPWNPGGFWM------------IGARNGQNVVALNV-----ASSDGGKTLAGTMI 253
Query: 247 NYECECQSGYRGK 259
Y E G+R +
Sbjct: 254 -YNGEGPIGFRAR 265
Score = 51.6 bits (123), Expect = 1e-06
Identities = 29/259 (11%), Positives = 54/259 (20%), Gaps = 76/259 (29%)
Query: 159 DGTCVNTPGSFACNCTQGFTGPRCETNVNE------CESHPCQNDGSCLDDPGTFRCVCM 212
G + ++ GF G N S P Q G +
Sbjct: 43 GGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWV----------- 91
Query: 213 CEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNL 272
QN + +GG Y E G++ + + +
Sbjct: 92 -LGARDKQN-----IVAVSIKSNDGGKTLTGTTT-YNGEGPIGFKSEVTDGDTYSVENQW 144
Query: 273 -----------------------------CQNGATCMDGINKYSCLCLATYTGDLCEQDV 303
+G + G Y+ + G L D
Sbjct: 145 GGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSPDT 204
Query: 304 DE------CSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATC 357
S P + G + G + ++ + +G
Sbjct: 205 YTVENQWGGSTAP--WNPGGF-----------WMIGARNGQNVVALNVASS----DGGKT 247
Query: 358 IDRVGSFYCQCTPGKTGLL 376
+ + + G L
Sbjct: 248 LAGTMIYNGEGPIGFRARL 266
Score = 45.9 bits (108), Expect = 7e-05
Identities = 20/133 (15%), Positives = 31/133 (23%), Gaps = 27/133 (20%)
Query: 1326 ANGGVCVDLIDGFKCECPRGYYDARCLSDVDE------CASDPCLNGGTCEDGLNQFICH 1379
+GG + + E P G+ ++ S P GG G
Sbjct: 41 DDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARD---- 96
Query: 1380 CKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDD------ 1433
I GG Y E IG+ + +
Sbjct: 97 -----KQNIVAVSI------KSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWG 145
Query: 1434 CAFKPCRHGGTCI 1446
+ P GG +
Sbjct: 146 GSAAPWHSGGVWV 158
Score = 44.3 bits (104), Expect = 2e-04
Identities = 27/174 (15%), Positives = 47/174 (27%), Gaps = 35/174 (20%)
Query: 862 QQPINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTP 921
Q + + GG + Y + + V N Q G P
Sbjct: 98 QNIVAVS----IKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYS-VEN--QWGGSAAP 150
Query: 922 SANFQDFACHCGVGWT-GRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDC 980
H G W G ++V + + +G + +Y E G+ G
Sbjct: 151 --------WHSGGVWVLGTRGKQNVI--NVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLT 200
Query: 981 LINTDD------CASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSN 1028
+T ++ P GG + G V ++ SS+
Sbjct: 201 SPDTYTVENQWGGSTAPWNPGGF-----------WMIGARNGQNVVALNVASSD 243
Score = 41.2 bits (96), Expect = 0.002
Identities = 36/247 (14%), Positives = 63/247 (25%), Gaps = 48/247 (19%)
Query: 236 NGGVCRELDNLNYECECQSGYRGKNCEENIDD------CPGNLCQNGATCMDGINKYSCL 289
+GG + Y E G+RG N Q G + G
Sbjct: 42 DGGKTLKGTMT-YNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARD---- 96
Query: 290 CLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGA 349
+Q++ SI+ ++G ++ G+ +
Sbjct: 97 ----------KQNIVAVSIK---SNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVE-- 141
Query: 350 ACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAIC-DTNPIINGS--YTC 406
+ P +G + L N + DA D ++G+ Y
Sbjct: 142 ------------NQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNG 189
Query: 407 SCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGH 466
G++G S D E P GG + + V +
Sbjct: 190 EGPIGFRGTLTSPDTYTVENQWGGST-------APWNPGGFWMIGARNGQNVVALNVASS 242
Query: 467 DCHQKLD 473
D + L
Sbjct: 243 DGGKTLA 249
Score = 41.2 bits (96), Expect = 0.002
Identities = 25/180 (13%), Positives = 47/180 (26%), Gaps = 34/180 (18%)
Query: 537 CVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAPLTVLWIAYNWSTTTTATAA 596
++ Y+ G+ G + V+ S P +W+ +
Sbjct: 46 TLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQP-GGVWVLGARDKQNIVAVS 104
Query: 597 LATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYD------CDSNPCQNGGFC------- 643
+ + +GG + P + + Y + P +GG
Sbjct: 105 IKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGK 164
Query: 644 --------RSKEGGG-------YRCDCPPGATGTHCELDSRN-----ECYSNPCQHAGTC 683
+S +GG Y + P G GT D+ + P G
Sbjct: 165 QNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSPDTYTVENQWGGSTAPWNPGGFW 224
Score = 36.2 bits (83), Expect = 0.085
Identities = 21/136 (15%), Positives = 34/136 (25%), Gaps = 33/136 (24%)
Query: 581 LWIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYD------CDS 634
LW+ + + +GG + P + G Y S
Sbjct: 22 LWLIGARDKQNVVALDIKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTS 81
Query: 635 NPCQNGGFC---------------RSKEGGG-------YRCDCPPGATGTHCELDSRNE- 671
P Q GG +S +GG Y + P G + D+ +
Sbjct: 82 APWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVE 141
Query: 672 ----CYSNPCQHAGTC 683
+ P G
Sbjct: 142 NQWGGSAAPWHSGGVW 157
Score = 33.9 bits (77), Expect = 0.44
Identities = 16/126 (12%), Positives = 33/126 (26%), Gaps = 9/126 (7%)
Query: 524 CLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAPLTVLWI 583
+S + G + Y+ G+ + +V+ ++ V W+
Sbjct: 102 AVSIKSNDGGK--TLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGV-WV 158
Query: 584 AYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYD------CDSNPC 637
+ +GG + + P + G Y + P
Sbjct: 159 LGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSPDTYTVENQWGGSTAPW 218
Query: 638 QNGGFC 643
GGF
Sbjct: 219 NPGGFW 224
Score = 31.6 bits (71), Expect = 2.6
Identities = 18/106 (16%), Positives = 29/106 (27%), Gaps = 18/106 (16%)
Query: 1604 RIKQEPTGHEMIYQHGGICTDHLNGYTCECQIGYTGGYISLNMSTST------------- 1650
R KQ + GG Y E IG+ + +
Sbjct: 95 RDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSG 154
Query: 1651 ----LGIICEINVPDCLPGACHNNGTCVDKVGGFECRCPPGFVGSR 1692
LG + NV + ++ G + + P GF G+
Sbjct: 155 GVWVLGTRGKQNV-INVDAKSNDGGKTLSGTMTYNGEGPIGFRGTL 199
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat,
helix, extended loop, four repeat, PR ANK repeat, disease
mutation, metal-binding; 2.00A {Homo sapiens} SCOP:
k.37.1.1
Length = 137
Score = 81.3 bits (202), Expect = 5e-18
Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 15/108 (13%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
YL+ +D NV D++G T LH A ++ V +LL H
Sbjct: 24 PSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDA 83
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+ G K LL A+R + P D + ++ L +++
Sbjct: 84 AKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131
Score = 64.8 bits (159), Expect = 3e-12
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 16/98 (16%)
Query: 1835 ADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP---------------REGSYGACK 1879
D ++ G+T LH A+ +I +V LL +G +P G +
Sbjct: 2 IDPFT-NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVE 60
Query: 1880 ALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
LL + A T + + P A++ H DIV+LL +
Sbjct: 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSY 98
Score = 55.1 bits (134), Expect = 6e-09
Identities = 5/45 (11%), Positives = 15/45 (33%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVN 1869
D L++ A N + G + + + + + + +
Sbjct: 90 DIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain,
disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB:
2rhp_A*
Length = 634
Score = 89.3 bits (221), Expect = 5e-18
Identities = 74/487 (15%), Positives = 118/487 (24%), Gaps = 54/487 (11%)
Query: 944 DVDECQLSSPCRNGATCHNT-NGSYLC-ECAKGYEGR--------DCLINTDDCASFPCQ 993
D D C LS+PC GA C + +GS+ C C G+ G +C + D C F
Sbjct: 2 DPDGC-LSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDIC--FSTS 58
Query: 994 NGGTCLDEVGDYSCL-CVDGFSGKH---CEVDIDECSSNPCHNGATCNQFQMIFIFFTNQ 1049
C++ + CL C + G ++ + C C
Sbjct: 59 KVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCK------------ 106
Query: 1050 YSWFLIAGSPCEHDGTCVNTP----GSFACNCTQGFTGPRCETNVNECESHPCQNDGSCL 1105
C C+ + C C G+ G + + C
Sbjct: 107 -----DKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNLNLVCA 161
Query: 1106 DDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQIN 1165
+ + D D+ + ND + K C + F +
Sbjct: 162 TNATYHCIKDNCPHLPNSGQEDFDKDGIGDACDDDDDNDGVTDEKDNCQLLFNPRQADYD 221
Query: 1166 IDDCVSSP-----CHNGGICKDSIAGYTCECLAGFTGMSCETNINDCAS--NPCHRGECI 1218
D+ HN G C G ++C N R
Sbjct: 222 KDEVGDRCDNCPYVHNPAQIDTDNNGEGDACSVDIDGDDVFNERDNCPYVYNTDQRDTDG 281
Query: 1219 DGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEIN 1278
DG C + D +D Q C P S N +
Sbjct: 282 DGVGDHCDNCPLVHNPDQTDVDNDLVGDQCDNNEDIDDDGHQNNQDNC-PYISNANQADH 340
Query: 1279 INECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINEC--ASNPCANGGVCVDLID 1336
+ + C DG+ C + + + + + D+ D
Sbjct: 341 DRDGQGDACDPDD-DNDGVPDDRDNCRLVFNPDQEDLDGDGRGDICKDDFDNDNIPDIDD 399
Query: 1337 GFKCEC-----PRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEF 1391
+ L DP L Q G
Sbjct: 400 VCPENNAISETDFRNFQMVPLDPKGTTQIDPNWVIRHQGKELVQTANSDPGIAVGFDEFG 459
Query: 1392 DIDECGS 1398
+D G+
Sbjct: 460 SVDFSGT 466
Score = 86.6 bits (214), Expect = 3e-17
Identities = 69/414 (16%), Positives = 115/414 (27%), Gaps = 66/414 (15%)
Query: 1021 DIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFAC-NCTQ 1079
D D C SNPC GA C+ F GS++C C
Sbjct: 2 DPDGCLSNPCFPGAQCSSF-----------------------------PDGSWSCGFCPV 32
Query: 1080 GFTGPRCE-TNVNECES-----HPCQNDGSCLDDPGTFRC-VCMPGFTGTQCE------- 1125
GF G +++EC C++ F C C P + G Q
Sbjct: 33 GFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAA 92
Query: 1126 -------TDIDECA--SNPCLNGGICNDL----INTFKCACPIGFTGSHCQINIDDCVSS 1172
+ C ++ C C L +KC C G+ G D +
Sbjct: 93 KTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDG 152
Query: 1173 PCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCAS-NPCHRGECIDGENSFTCACHPG 1231
+ +C + + + S + + + + C + DG C
Sbjct: 153 WPNLNLVCATNATYHCIKDNCPHLPNSGQEDFDKDGIGDACDDDDDNDGVTDEKDNCQLL 212
Query: 1232 FTGALCNTQLDECASNPCQF-----GGQCEDLINGYQCRCKPGTSGTNCEININECYSNP 1286
F + DE Q + NG C G + + C
Sbjct: 213 FNPRQADYDKDEVGDRCDNCPYVHNPAQIDTDNNGEGDACSVDIDGDDVFNERDNCPYVY 272
Query: 1287 CRNGA-KCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRG 1345
+ DG+ + C + + + + N + D + CP
Sbjct: 273 NTDQRDTDGDGVGDHCDNCPLVHNPDQTDVDNDLVGDQCDNNEDIDDDGHQNNQDNCPYI 332
Query: 1346 YYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSN 1399
+ D D D C + DG+ +C+ + + + D D G
Sbjct: 333 SNANQADHDRDGQ-GDAC-DPDDDNDGVPDDRDNCRLVFNPDQEDLDGDGRGDI 384
Score = 69.3 bits (169), Expect = 8e-12
Identities = 46/223 (20%), Positives = 69/223 (30%), Gaps = 31/223 (13%)
Query: 1242 DECASNPCQFGGQCEDLING-YQC-RCKPGTS--GTNCEININECYSN-----PCRNGAK 1292
D C SNPC G QC +G + C C G GT+CE +++EC +
Sbjct: 4 DGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDECALVPDICFSTSKVPR 62
Query: 1293 CVDGINRYSCE-CLPGYTGLHCE--------------TNINECA--SNPCANGGVCVDL- 1334
CV+ + C C P Y G N C ++ C C+ L
Sbjct: 63 CVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLG 122
Query: 1335 ---IDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEF 1391
+KCEC GY + D C + +
Sbjct: 123 HFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNLNLVCATNATYHCIKDNCPHLPNSGQE 182
Query: 1392 DIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDC 1434
D D+ G D + CQ+ + + + D+
Sbjct: 183 DFDKDGIGDACDDDDDNDGVTDEKDNCQLLFNPRQADYDKDEV 225
Score = 68.5 bits (167), Expect = 1e-11
Identities = 57/354 (16%), Positives = 88/354 (24%), Gaps = 39/354 (11%)
Query: 38 NSCDSFPCMNGGTCTLKSLDRYTCT-CAPGFT--GSQCELQDHCASS-----PCRNGAVC 89
+ C S PC G C+ ++C C GF G+ CE D CA C
Sbjct: 4 DGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRC 63
Query: 90 TSLEDTYECD-CAPGFVGQTCSEDIIECVDDPCVHGECFNTHGSYTFQMIFIFFTNQYSW 148
+ + + C C P + G +E E N
Sbjct: 64 VNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENP------------------- 104
Query: 149 FLIAGSPCEHDGTCVNTP----GSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDP 204
C C+ + C C G+ G + + C +
Sbjct: 105 CKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNLNLVCATNA 164
Query: 205 G----TFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKN 260
C + G + + CD +G + + Q+ Y
Sbjct: 165 TYHCIKDNCPHLPNSGQEDFDKDGIGDACDDDDDNDGVTDEKDNCQLLFNPRQADYDKDE 224
Query: 261 CEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCT 320
+ D+CP N A N C GD + D C + T
Sbjct: 225 VGDRCDNCP--YVHNPAQIDTDNNGEGDACSVDIDGDDVFNERDNCPYVYNTD-QRDTDG 281
Query: 321 NSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTG 374
+ VG C ++ D N D + C
Sbjct: 282 DGVGDHCDNCPLVHNPDQTDVDNDLVGDQCDNNEDIDDDGHQNNQDNCPYISNA 335
Score = 62.7 bits (152), Expect = 8e-10
Identities = 54/317 (17%), Positives = 91/317 (28%), Gaps = 36/317 (11%)
Query: 152 AGSPCEHDGTCVNTP-GSFAC-NCTQGFTGPRCE-TNVNECES-----HPCQNDGSCLDD 203
+PC C + P GS++C C GF G +++EC C++
Sbjct: 7 LSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNT 66
Query: 204 PGTFRCVCMCEPGYTGQNCESKYVPC----------------DPSPCQNGGVCRELDNL- 246
F C+ C P Y G + C C L +
Sbjct: 67 QPGFHCLP-CPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFS 125
Query: 247 --NYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVD 304
Y+CECQ+GY G D C + + + ++D D
Sbjct: 126 DPMYKCECQTGYAGDGLICGEDSDLDGWPNLNLVCATNATYHCIKDNCPHLPNSGQEDFD 185
Query: 305 ECSIRPSV--CHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVG 362
+ I + + T+ + D D C + ID
Sbjct: 186 KDGIGDACDDDDDNDGVTDEKDNCQLLFNPRQADYDKDEVGDRCDNCPYVHNPAQIDTDN 245
Query: 363 SFY-CQCTPGKTGL-LCHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSED 420
+ C+ G + + D C D + + G + +C + D
Sbjct: 246 NGEGDACSVDIDGDDVFNERDNCPYVYNTDQRDTDGDGV--GDHCDNCPLVHNPDQT--D 301
Query: 421 INECEQGINCEINIDDC 437
++ G C+ N D
Sbjct: 302 VDNDLVGDQCDNNEDID 318
Score = 61.6 bits (149), Expect = 2e-09
Identities = 43/232 (18%), Positives = 61/232 (26%), Gaps = 31/232 (13%)
Query: 265 IDDCPGNLCQNGATCMDGIN-KYSCL-CLATYTGDLCE-QDVDECSIRPSVCH---NGAT 318
D C N C GA C + +SC C + G+ +D+DEC++ P +C
Sbjct: 3 PDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPR 62
Query: 319 CTNSVGGFSCI-CVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLC 377
C N+ GF C+ C + G AA C
Sbjct: 63 CVNTQPGFHCLPCPPRYRGNQPV---GVGLEAAKTEKQVCEPEN---------------- 103
Query: 378 HLEDACTSNPCHADAIC-DTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDD 436
++ CH A C + Y C C +GY G + G
Sbjct: 104 --PCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPN--LNLV 159
Query: 437 CAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVRCLTPG 488
CA H G D +
Sbjct: 160 CATNATYHCIKDNCPHLPNSGQEDFDKDGIGDACDDDDDNDGVTDEKDNCQL 211
Score = 59.6 bits (144), Expect = 7e-09
Identities = 47/278 (16%), Positives = 69/278 (24%), Gaps = 63/278 (22%)
Query: 186 VNECESHPCQNDGSCLD-DPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELD 244
+ C S+PC C G++ C C G+ G NG C +LD
Sbjct: 3 PDGCLSNPCFPGAQCSSFPDGSWSC-GFCPVGFLG----------------NGTHCEDLD 45
Query: 245 NLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCL-CLATYTGDLCE--- 300
C D C C++ + CL C Y G+
Sbjct: 46 ---------------ECALVPDICFS--TSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVG 88
Query: 301 -----------QDVDECSIRPSVCHNGATCTN----SVGGFSCICVNGWTGPDCSLNIDD 345
+ + C + CH A C S + C C G+ G D
Sbjct: 89 LEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDS 148
Query: 346 C------AGAACFNGATCIDRVGSFYCQCTPGKTGL-LCHLEDACTSNPCHADAICDTNP 398
C AT + G+ + DAC + + + +
Sbjct: 149 DLDGWPNLNLVCATNATYHCIKDNCPHLPNSGQEDFDKDGIGDACDDDDDNDGVTDEKDN 208
Query: 399 IINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDD 436
V D C N D
Sbjct: 209 CQLLFNPRQADYDKDEVGDRCDN--CPYVHNPAQIDTD 244
Score = 56.9 bits (137), Expect = 5e-08
Identities = 53/325 (16%), Positives = 87/325 (26%), Gaps = 35/325 (10%)
Query: 112 DIIECVDDPCVHG-ECFNT-HGSYTFQMIFIFFT---------NQYSWFLIAGSPCEHDG 160
D C+ +PC G +C + GS++ + F ++ +
Sbjct: 2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVP 61
Query: 161 TCVNTPGSFAC-NCTQGFTGPRCE--------------TNVNECE--SHPCQNDGSCLDD 203
CVNT F C C + G + N C+ +H C C+
Sbjct: 62 RCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYL 121
Query: 204 PGT--FRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNC 261
C C+ GY G VC + + + +
Sbjct: 122 GHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNLNLVCATNAT-YHCIKDNCPHLPNSG 180
Query: 262 EENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTN 321
+E+ D + DG+ C + + D DE R C
Sbjct: 181 QEDFDKDGIGDACDDDDDNDGVTDEKDNCQLLFNPRQADYDKDEVGDRCDNCPYVHNPAQ 240
Query: 322 S---VGGFSCICVNGWTGPDCSLNIDDCAGAACFNGA-TCIDRVGSFYCQCTPGKTGLLC 377
G C G D D+C + T D VG C
Sbjct: 241 IDTDNNGEGDACSVDIDGDDVFNERDNCPYVYNTDQRDTDGDGVGDHCDNCPLVHNPDQT 300
Query: 378 HLEDACTSNPCHADAICDTNPIING 402
+++ + C + D + N
Sbjct: 301 DVDNDLVGDQCDNNEDIDDDGHQNN 325
Score = 51.6 bits (123), Expect = 2e-06
Identities = 58/344 (16%), Positives = 93/344 (27%), Gaps = 66/344 (19%)
Query: 381 DACTSNPCHADAICDTNPIINGSYTC-SCASGYK--GVNCSEDINECEQGINCEINIDDC 437
D C SNPC A C + P +GS++C C G+ G +C ED++EC + D C
Sbjct: 4 DGCLSNPCFPGAQCSSFP--DGSWSCGFCPVGFLGNGTHC-EDLDECA------LVPDIC 54
Query: 438 AFKPCRHGGTCIDLVNAYKC-VCQVPYTGHDCHQKLDPCVPNSACVRCLTPGMIVIRSWI 496
C++ + C C Y G+
Sbjct: 55 F--STSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTE----------------- 95
Query: 497 LVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQL----VNNYHCNCRPGY 552
CE N C + H +C+ L Y C C+ GY
Sbjct: 96 -----------------KQVCE-PENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGY 137
Query: 553 MG------------RHCEVKDLAVKVTSMNASPTLAPLTVLWIAYNWSTTTTATAALATW 600
G + + + + P ++ A
Sbjct: 138 AGDGLICGEDSDLDGWPNLNLVCATNATYHCIKDNCPHLPNSGQEDFDKDGIGDACDDDD 197
Query: 601 NGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGAT 660
+ T + + + + G CD+ P + + G C
Sbjct: 198 DNDGVTDEKDNCQLLFNPRQADYDKDEVGDRCDNCPYVHNPAQIDTDNNGEGDACSVDID 257
Query: 661 GTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCD 704
G + N Y T D + D+ C + N D
Sbjct: 258 GDDVFNERDNCPYVYNTDQRDTDGDGVGDHCDNCPLVHNPDQTD 301
Score = 51.6 bits (123), Expect = 2e-06
Identities = 41/234 (17%), Positives = 65/234 (27%), Gaps = 30/234 (12%)
Query: 1353 SDVDECASDPCLNGGTCEDGLN-QFIC-HCKPGYG--GKRCEFDIDECGSN-----PCQH 1403
+D D C S+PC G C + + C C G+ G CE D+DEC
Sbjct: 1 ADPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDECALVPDICFSTSK 59
Query: 1404 GGICTDHLNGYTCE-CQIGYTGINCEINIDDCAFKPCRHGGTCID----LVNAYKCVCAK 1458
C + G+ C C Y G + A C + C
Sbjct: 60 VPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAK---TEKQVCEPENPCKDKTHNCHKHA 116
Query: 1459 AGNHRCDDECNTIACH----FDGNDCSLGI------NPWINCTANINCWEVFMNGRCDEV 1508
+ C + G+ G P +N N + C +
Sbjct: 117 ECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNLNLVCATNATYHCIKDNCPHL 176
Query: 1509 CNNPQCLFDGRDCEKNLQPCNPIYDAYCQKHYANGHCDYSCNNAECNWDGLDCE 1562
N+ Q FD + + N ++ A+ + D +
Sbjct: 177 PNSGQEDFDKDGIGDACDDDDD--NDGVTDEKDNCQLLFNPRQADYDKDEVGDR 228
Score = 50.4 bits (120), Expect = 6e-06
Identities = 60/402 (14%), Positives = 87/402 (21%), Gaps = 64/402 (15%)
Query: 632 CDSNPCQNGGFCRSKEGGGYRCD-CPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADY 690
C SNPC G C S G + C CP G G + +EC P C
Sbjct: 6 CLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVP----DICFSTSKVP 61
Query: 691 ACYCLPMWNGKNCDLYDPLFRGGLGRDTKKQITSLSGFDFELEKEMEKCKQNNCRAKAGN 750
C G +C P +RG Q
Sbjct: 62 RCVNTQ--PGFHCLPCPPRYRG---------------------------NQPVGVGLEAA 92
Query: 751 HRCDDECNTIACHFDGNDCSLGINPWINCTANINCWEVFMNGRCDEVCNNPQ-CLFDGRD 809
C N C + NC + C + C DG
Sbjct: 93 KTEKQVCE------PENPCKDKTH---NCHKHAECIYLGHFSDPMYKCECQTGYAGDGLI 143
Query: 810 CEKNLQPCNPIYDGRLLFSQLNFARDHDPGVWLMYFLYSAITIRRKLKPLQQQQPINIDD 869
C ++ + LN + + + + D
Sbjct: 144 CGEDSDLDG--------WPNLNLVCATNATYHCIKDNCPHLP---------NSGQEDFDK 186
Query: 870 CAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQD-- 927
D V K CQ+ + D P+ D
Sbjct: 187 DGIGDACDDDDDNDGVTDEKDNCQLLFNPRQADYDKDEVGDRCDNCPYVHNPAQIDTDNN 246
Query: 928 -FACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDD 986
C V G + D C T + G + C + ++ D
Sbjct: 247 GEGDACSVDIDGDDVFNERDNCPYVYNTDQRDTDGDGVGDHCDNCPLVHNPDQTDVDNDL 306
Query: 987 CASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSN 1028
N D + C + + D D
Sbjct: 307 VGDQCDNNEDIDDDGHQNNQDNCPYISNANQADHDRDGQGDA 348
Score = 49.6 bits (118), Expect = 1e-05
Identities = 52/431 (12%), Positives = 95/431 (22%), Gaps = 44/431 (10%)
Query: 1 CQNGGTCNVRQSPSYSPSFWC-SCPIGFSASLCEIPVANSCDS-----FPCMNGGTCTLK 54
C G C+ S+S C CP+GF + + C F C
Sbjct: 11 CFPGAQCSSFPDGSWS----CGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNT 66
Query: 55 SLDRYTCTCAPGFTGSQ---------------CELQDHCA--SSPCRNGAVCTSLED--- 94
+ C P + G+Q CE ++ C + C A C L
Sbjct: 67 QPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSD 126
Query: 95 -TYECDCAPGFVGQTCS------EDIIECVDDPCVHGECFNTHGSYTFQMIFIFFTNQYS 147
Y+C+C G+ G D ++ C ++ + +
Sbjct: 127 PMYKCECQTGYAGDGLICGEDSDLDGWPNLNLVCATNATYHCIKDNCPHLPNSGQEDFDK 186
Query: 148 WFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTF 207
+ + D V + V + + D
Sbjct: 187 DGIGDACDDDDDNDGVTDEKDNCQLLFNPRQADYDKDEVGDRCDNCPYVHNPAQIDTDNN 246
Query: 208 RCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDD 267
C G + ++ C + ++ C + + + D
Sbjct: 247 GEGDACSVDIDGDDVFNERDNCPYVYNTDQRDTDGDGVGDHCDNCPLVHNPDQTDVDNDL 306
Query: 268 CPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFS 327
N DG C + + D D + +
Sbjct: 307 VGDQCDNNEDIDDDGHQNNQDNCPYISNANQADHDRDGQGDACDPDDDNDGVPDDRDNCR 366
Query: 328 CICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNP 387
+ D + F+ D +T P
Sbjct: 367 LVFNPDQE--DLDGDGRGDICKDDFDNDNIPDIDDVCPENNAISETD-----FRNFQMVP 419
Query: 388 CHADAICDTNP 398
+P
Sbjct: 420 LDPKGTTQIDP 430
Score = 31.5 bits (71), Expect = 3.6
Identities = 44/257 (17%), Positives = 68/257 (26%), Gaps = 17/257 (6%)
Query: 520 DINECLSNPCSSHGTLDCVQLVN-NYHC-NCRPGYM--GRHCEVKDLAVKVTSMNASPTL 575
D + CLSNPC C + ++ C C G++ G HCE D V + S +
Sbjct: 2 DPDGCLSNPCFPGAQ--CSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTS- 58
Query: 576 APLTVLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSN 635
+ N V L+ T C+ ++C +
Sbjct: 59 --KVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEP-ENPCKDKTHNCHKH 115
Query: 636 -PCQNGGFCRSKEGGGYRCDCPPGATG--THCELDSRNECYSNPCQHAGTCEDRIADYAC 692
C G Y+C+C G G C DS + + N
Sbjct: 116 AECIYLGHFSD---PMYKCECQTGYAGDGLICGEDSDLDGWPNLN-LVCATNATYHCIKD 171
Query: 693 YCLPMWNGKNCDLYDPLFRGGLGRDTKKQITSLSGFDFELEKEMEKCKQNNCRAKAGNHR 752
C + N D D + + +L + +
Sbjct: 172 NCPHLPNSGQEDFDKDGIGDACDDDDDNDGVTDEKDNCQLLFNPRQADYDKDEVGDRCDN 231
Query: 753 CDDECNTIACHFDGNDC 769
C N D N
Sbjct: 232 CPYVHNPAQIDTDNNGE 248
Score = 30.4 bits (68), Expect = 7.6
Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 10/77 (12%)
Query: 1617 QHGGICTDHLNG-YTC-ECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCV 1674
G C+ +G ++C C +G+ G N + C + C CV
Sbjct: 12 FPGAQCSSFPDGSWSCGFCPVGFLG-----NGTHCEDLDECALVPDICFS--TSKVPRCV 64
Query: 1675 DKVGGFEC-RCPPGFVG 1690
+ GF C CPP + G
Sbjct: 65 NTQPGFHCLPCPPRYRG 81
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase,
cyclin dependent kinase inhibitory protein, CDK, cell
cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A
1dc2_A 2a5e_A
Length = 156
Score = 81.8 bits (203), Expect = 6e-18
Identities = 27/109 (24%), Positives = 40/109 (36%), Gaps = 17/109 (15%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
+ L+ A A+ N P++ G+ + + +LL HG P
Sbjct: 26 EEVRALLEAGANPNAPNSYGRRPIQVMMM-GSARVAELLLLHGAEPNCADPATLTRPVHD 84
Query: 1871 --REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
REG L A ++ D RLP D+A E H D+ R L
Sbjct: 85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAA 133
Score = 62.5 bits (153), Expect = 3e-11
Identities = 12/87 (13%), Positives = 23/87 (26%), Gaps = 23/87 (26%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDN 1884
D L A A ++V D G+ + A + + D L +
Sbjct: 92 DTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAA----------------- 134
Query: 1885 FANREITDHMDRLPRDVASERLHHDIV 1911
++ + + DI
Sbjct: 135 -GGTRGSN-----HARIDAAEGPSDIP 155
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch,
ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB:
3ixe_A 2kbx_A
Length = 179
Score = 82.5 bits (205), Expect = 7e-18
Identities = 24/108 (22%), Positives = 36/108 (33%), Gaps = 15/108 (13%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
LI A INV + T LH AA+ + D V LL + +
Sbjct: 53 AVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYA 112
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
G + L+ N A I + +P D A L + ++
Sbjct: 113 CFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKM 160
Score = 64.8 bits (159), Expect = 9e-12
Identities = 10/52 (19%), Positives = 17/52 (32%)
Query: 1819 CLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP 1870
C D A L+ A +++ + G+ + A A G N
Sbjct: 113 CFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNL 164
Score = 62.4 bits (153), Expect = 5e-11
Identities = 20/115 (17%), Positives = 33/115 (28%), Gaps = 16/115 (13%)
Query: 1819 CLINTDDCASYLI-NADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP------- 1870
C + N + D+N D+ G + LHWA V +L+ G
Sbjct: 13 CREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGD 72
Query: 1871 --------REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
G + LL A+ + +P A + L +
Sbjct: 73 DTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN 127
Score = 57.1 bits (139), Expect = 4e-09
Identities = 18/93 (19%), Positives = 30/93 (32%), Gaps = 16/93 (17%)
Query: 1841 DNSGKTALHWAAAVNNIDAVNILLSHGVNP----------------REGSYGACKALLDN 1884
+ N AV + L + N REG + L+
Sbjct: 2 SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR 61
Query: 1885 FANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
A + + D P +A+ H DIV+ L ++
Sbjct: 62 GARINVMNRGDDTPLHLAASHGHRDIVQKLLQY 94
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC,
rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens}
PDB: 3uxg_A
Length = 172
Score = 81.7 bits (203), Expect = 9e-18
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 15/108 (13%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
+ +L+ AD ++ ++AL A+ D V +LL V+
Sbjct: 50 ETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYA 109
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
R +ALL A+ P D+A + + ++++ H
Sbjct: 110 VRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENH 157
Score = 70.9 bits (175), Expect = 6e-14
Identities = 26/109 (23%), Positives = 34/109 (31%), Gaps = 16/109 (14%)
Query: 1825 DCASYLINADAD-INVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP------------- 1870
D + + +N PD G T L WA+A I+ V LL G +P
Sbjct: 16 DQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSL 75
Query: 1871 --REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
G LL+ + I D P A H V L
Sbjct: 76 ASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLAR 124
Score = 64.7 bits (159), Expect = 8e-12
Identities = 10/46 (21%), Positives = 19/46 (41%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP 1870
C L+ AD+ +SG T + A A+ ++ +H +
Sbjct: 116 KCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKL 161
Score = 54.7 bits (133), Expect = 2e-08
Identities = 20/90 (22%), Positives = 29/90 (32%), Gaps = 16/90 (17%)
Query: 1844 GKTALHWAAAVNNIDAVNILLSHGVNP----------------REGSYGACKALLDNFAN 1887
++H AA +D + L G N G + LL+ A+
Sbjct: 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61
Query: 1888 REITDHMDRLPRDVASERLHHDIVRLLDEH 1917
I +AS + DIV LL E
Sbjct: 62 PHILAKERESALSLASTGGYTDIVGLLLER 91
Score = 33.5 bits (78), Expect = 0.33
Identities = 1/22 (4%), Positives = 4/22 (18%)
Query: 1825 DCASYLINADADINVPDNSGKT 1846
+ N + +
Sbjct: 149 KVQQVIENHILKLFQSNLVPAD 170
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell
adhesion, DI mutation, glycoprotein, HOST-virus
interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo
sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Length = 690
Score = 88.6 bits (219), Expect = 1e-17
Identities = 58/319 (18%), Positives = 79/319 (24%), Gaps = 65/319 (20%)
Query: 1115 CMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGS-----------HCQ 1163
+PG D + + C P+GF S CQ
Sbjct: 379 VIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQ 438
Query: 1164 INIDDCVSSPCHNGG-------ICKDSIAGYTCECLAGFTGMSCETNINDCASNPCH--R 1214
+ + G C G CEC S + + P R
Sbjct: 439 AQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQR 498
Query: 1215 GECIDGENSFTCACHPGFTGALC-------NTQLDECASNPCQFGGQCEDLINGYQCRCK 1267
GEC+ G+ C CH G + + C GQC C C
Sbjct: 499 GECLCGQ----CVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCD 550
Query: 1268 PGTSGTNCEININEC-----YSNPCRNGAKCVDGINRYSCECL-PGYTGLHCETNINECA 1321
+G C C KC G SC C+ PG G CE
Sbjct: 551 SDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECG----SCVCIQPGSYGDTCEK--CPTC 604
Query: 1322 SNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCK 1381
+ C C EC + A D + C + +
Sbjct: 605 PDACTFKKEC--------VECKKFDRGALH--DENTCNRYCRDEIESVK-------ELKD 647
Query: 1382 PGYGGKRC-EFDIDECGSN 1399
G C + D+C
Sbjct: 648 TGKDAVNCTYKNEDDCVVR 666
Score = 85.1 bits (210), Expect = 1e-16
Identities = 62/352 (17%), Positives = 89/352 (25%), Gaps = 73/352 (20%)
Query: 951 SSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEVGDYSCLCV 1010
++ C N C K + I + + VG L V
Sbjct: 371 NATCLNNEVIPGLKS---CMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIV 427
Query: 1011 DGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTP 1070
C ++ N G C P
Sbjct: 428 QVTFDCDCACQAQAEPNSHRCNNGNG-----------------------TFECGVCRCGP 464
Query: 1071 GSF--ACNCTQGFTGPRCETNVNECESHP-CQNDGSCLDDPGTFRCVCMPGFTG----TQ 1123
G C C++ P + + E P C G CL +CVC G
Sbjct: 465 GWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCG----QCVCHSSDFGKITGKY 520
Query: 1124 CETDIDECA---SNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCV-----SSPCH 1175
CE D C C G C+ C C +TG +C C
Sbjct: 521 CECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCS 576
Query: 1176 NGGICKDSIAGYTCECLA-GFTGMSCETNINDCASNPCHRGECIDGENSFTCACHPGFTG 1234
G C+ +C C+ G G +CE C + EC C G
Sbjct: 577 GRGKCEC----GSCVCIQPGSYGDTCEK-CPTCPDACTFKKEC--------VECKKFDRG 623
Query: 1235 ALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNC-EININECYSN 1285
AL + + C+ + + G NC N ++C
Sbjct: 624 ALHDE---NTCNRYCRDEIES------VKELKDTGKDAVNCTYKNEDDCVVR 666
Score = 82.1 bits (202), Expect = 1e-15
Identities = 66/344 (19%), Positives = 91/344 (26%), Gaps = 83/344 (24%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVA--------NSCDSFPCMNGGTCT 52
VR P + P+GF SL + + N G T
Sbjct: 395 VSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGT 454
Query: 53 LKSLDRYTCTCAPGFTGSQCELQDHCASSPCRNGAVCTSLED---------TYECDCAPG 103
+ C C PG+ GSQCE + ++ + +C C
Sbjct: 455 FEC---GVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSS 511
Query: 104 FVGQTCSEDIIECVDDPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCV 163
G+ EC D CV + G C G C
Sbjct: 512 DFGKIT-GKYCECDDFSCVRYK---------------------------GEMCSGHGQCS 543
Query: 164 NTPGSFACNCTQGFTGPRCETNVNEC-----ESHPCQNDGSCLDDPGTFRCVCMCEPGYT 218
C C +TG C C G C CVC +PG
Sbjct: 544 C----GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECG----SCVC-IQPGSY 594
Query: 219 GQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGAT 278
G CE P P C C EC+ RG +EN +
Sbjct: 595 GDTCEK--CPTCPDACTFKKEC---------VECKKFDRGALHDENTCNR---------Y 634
Query: 279 CMDGINKYSCLCLATYTGDLC-EQDVDECSIRPSVCHNGATCTN 321
C D I L C ++ D+C +R + + +
Sbjct: 635 CRDEIESVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSI 678
Score = 82.1 bits (202), Expect = 1e-15
Identities = 63/345 (18%), Positives = 93/345 (26%), Gaps = 79/345 (22%)
Query: 138 IFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCT----------------QGFTGPR 181
+ + F + G + SF+ GF
Sbjct: 366 LSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSL 425
Query: 182 CETNVN----ECESHPCQNDGSCLDDPGTFRC-VCMCEPGYTGQNCESKYVPCDPS---- 232
C++ N C + GTF C VC C PG+ G CE PS
Sbjct: 426 IVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDE 485
Query: 233 --------PCQNGGVCRELDNLNYECECQSGYRGKNCEE-------NIDDCPGNLCQNGA 277
C G C L +C C S GK + + G +C
Sbjct: 486 CSPREGQPVCSQRGEC-----LCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHG 540
Query: 278 TCMDGINKYSCLCLATYTGDLCEQDVDECSIRPS---VCHNGATCTNSVGGFSCICVN-G 333
C G CLC + +TG C + S +C C SC+C+ G
Sbjct: 541 QCSCG----DCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECG----SCVCIQPG 592
Query: 334 WTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAI 393
G C C A F +C G L ++ + C +
Sbjct: 593 SYGDTCE-KCPTCPDACTFKKEC---------VECKKFDRGALH--DENTCNRYCRDEIE 640
Query: 394 CDTNPIINGSYTCSCASGYKGVNCSE-DINECEQGINCEINIDDC 437
+G VNC+ + ++C +
Sbjct: 641 S---------VKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGK 676
Score = 77.8 bits (191), Expect = 2e-14
Identities = 43/293 (14%), Positives = 63/293 (21%), Gaps = 34/293 (11%)
Query: 1251 FGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTG 1310
+ + T + E + C ++ G +
Sbjct: 375 LNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCD 434
Query: 1311 LHCETNINECASNPCANGG-------VCVDLIDGFKCECPRGYYDARCLSDVDECASDP- 1362
C+ + G C G +CEC Y + P
Sbjct: 435 CACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPV 494
Query: 1363 CLNGGTCEDGLNQFICHCKPGYGGKRCE-------FDIDECGSNPCQHGGICTDHLNGYT 1415
C G C G C C GK F C G C+
Sbjct: 495 CSQRGECLCG----QCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC----GD 546
Query: 1416 CECQIGYTGINCEINIDDCAFKP-----CRHGGTCIDLVNAYKCVCAKAG--NHRCDDEC 1468
C C +TG C C G C CVC + G C+
Sbjct: 547 CLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC----GSCVCIQPGSYGDTCEKCP 602
Query: 1469 NTIACHFDGNDCSLGINPWINCTANINCWEVFMNGRCDEVCNNPQCLFDGRDC 1521
+C + N + + V D +C
Sbjct: 603 TCPDACTFKKECVECKKFDRGALHDENTCNRYCRDEIESVKELKDTGKDAVNC 655
Score = 77.8 bits (191), Expect = 2e-14
Identities = 54/322 (16%), Positives = 74/322 (22%), Gaps = 74/322 (22%)
Query: 865 INIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSAN 924
+ C + + V C + +P
Sbjct: 401 AKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTF----- 455
Query: 925 FQDFACHCGVGWTGRYCNEDVD----ECQLSSPCRNGATCHNTNGSYL---CECAKGYEG 977
+ C CG GW G C + Q R G + G L C C G
Sbjct: 456 -ECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFG 514
Query: 978 RDC-------LINTDDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPC 1030
+ + C G C CLC ++G +C +
Sbjct: 515 KITGKYCECDDFSCVRYKGEMCSGHGQCS----CGDCLCDSDWTGYYCNCTTR-TDTCMS 569
Query: 1031 HNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQ-GFTGPRCETN 1089
NG C+ G C +C C Q G G CE
Sbjct: 570 SNGLLCSGR------------------------GKCEC----GSCVCIQPGSYGDTCEK- 600
Query: 1090 VNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTF 1149
C C C G + + C D I +
Sbjct: 601 -CPTCPDACTFKKEC--------VECKKFDRGALHDENTCNRY---------CRDEIESV 642
Query: 1150 KCACPIGFTGSHCQI-NIDDCV 1170
K G +C N DDCV
Sbjct: 643 KELKDTGKDAVNCTYKNEDDCV 664
Score = 77.0 bits (189), Expect = 3e-14
Identities = 55/342 (16%), Positives = 81/342 (23%), Gaps = 78/342 (22%)
Query: 21 CSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTG--SQCELQDHC 78
SC + P + T+K + C+ Q
Sbjct: 384 KSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEP 443
Query: 79 ASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGECFNTHGSYTFQMI 138
S C NG + C C PG++G C +
Sbjct: 444 NSHRCNNGNGTF---ECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREG--------- 491
Query: 139 FIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCET-------NVNECES 191
C G C+ C C G + +
Sbjct: 492 --------------QPVCSQRGECLCG----QCVCHSSDFGKITGKYCECDDFSCVRYKG 533
Query: 192 HPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCE-----SKYVPCDPSPCQNGGVCRELDNL 246
C G C C+C+ +TG C + + C G C
Sbjct: 534 EMCSGHGQCSCG------DCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCE----- 582
Query: 247 NYECEC-QSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDE 305
C C Q G G CE+ CP C C C G L +++
Sbjct: 583 CGSCVCIQPGSYGDTCEK-CPTCPDA-CTFKKEC--------VECKKFDRGALHDENTCN 632
Query: 306 CSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSL-NIDDC 346
C + + + G +C+ N DDC
Sbjct: 633 R-----------YCRDEIESVKELKDTGKDAVNCTYKNEDDC 663
Score = 65.9 bits (160), Expect = 9e-11
Identities = 55/339 (16%), Positives = 76/339 (22%), Gaps = 74/339 (21%)
Query: 879 GTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQDFACHCGVGWTG 938
+ C + + + + C A + + C G
Sbjct: 395 VSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGT 454
Query: 939 RYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTC 998
C C+ P G+ C + Y R+ C G C
Sbjct: 455 FECG----VCR-CGPGWLGSQCECSEEDYRPSQQDECSPREG--------QPVCSQRGEC 501
Query: 999 LDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGS 1058
L C+C GK EC C
Sbjct: 502 LCGQ----CVCHSSDFGKITG-KYCECDDFSCVRYKGE---------------------- 534
Query: 1059 PCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNEC-----ESHPCQNDGSCLDDPGTFRC 1113
C G C C C +TG C C G C C
Sbjct: 535 MCSGHGQCSC----GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECG----SC 586
Query: 1114 VCM-PGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSS 1172
VC+ PG G CE + C C C G+ N +
Sbjct: 587 VCIQPGSYGDTCEK--CPTCPDACTFKKEC--------VECKKFDRGALHDENTCNR--- 633
Query: 1173 PCHNGGICKDSIAGYTCECLAGFTGMSC-ETNINDCASN 1210
C+D I G ++C N +DC
Sbjct: 634 ------YCRDEIESVKELKDTGKDAVNCTYKNEDDCVVR 666
Score = 60.5 bits (146), Expect = 4e-09
Identities = 51/354 (14%), Positives = 79/354 (22%), Gaps = 90/354 (25%)
Query: 232 SPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCL 291
+ C N V L + + + + CP ++ G + +
Sbjct: 372 ATCLNNEVIPGLKSCMGLKIGDTVSFSIEAK--VRGCPQEKEKSFTIKPVGFKDSLIVQV 429
Query: 292 ATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCA---- 347
C+ + S C+NG C C GW G C + +D
Sbjct: 430 TFDCDCACQAQAEPNS---HRCNNGNGTFEC---GVCRCGPGWLGSQCECSEEDYRPSQQ 483
Query: 348 --------GAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDAC--------TSNPCHAD 391
C C+ C C G + C C
Sbjct: 484 DECSPREGQPVCSQRGECLCGQ----CVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGH 539
Query: 392 AICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDL 451
C C C S + G C+ + + C G C
Sbjct: 540 GQCSCG-------DCLCDSDWTGYYCNCTTRTDTCMSSNGL--------LCSGRGKCEC- 583
Query: 452 VNAYKCVCQVP-YTGHDCHQK---LDPCVPNSACVRCLTPGMIVIRSWILVYRTERMVID 507
CVC P G C + D C CV C
Sbjct: 584 ---GSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDR------------------ 622
Query: 508 FGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKD 561
G+ + + C + + G +C K+
Sbjct: 623 ------GALHDENTCNR-----------YCRDEIESVKELKDTGKDAVNCTYKN 659
Score = 56.6 bits (136), Expect = 7e-08
Identities = 55/401 (13%), Positives = 81/401 (20%), Gaps = 115/401 (28%)
Query: 311 SVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTP 370
+ C N C+ + S+ + I VG +
Sbjct: 372 ATCLNNEVIPGLKS---CMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVG--FKDSLI 426
Query: 371 GKTGLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINC 430
+ C C + C+ C C G+ G C +
Sbjct: 427 VQVTFDCDCA--CQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQD 484
Query: 431 EINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVRCLTPGMI 490
E + + C G C+ +CVC G
Sbjct: 485 ECSPREGQ-PVCSQRGECLC----GQCVCHSSDFGKIT---------------------- 517
Query: 491 VIRSWILVYRTERMVIDFGMKHIGSRCEGDINECL---SNPCSSHGTLDCVQLVNNYHCN 547
G CE D C+ CS HG C C
Sbjct: 518 -----------------------GKYCECDDFSCVRYKGEMCSGHGQCSC------GDCL 548
Query: 548 CRPGYMGRHCEVKDLAVKVTSMNASPTLAPLTVLWIAYNWSTTTTATAALATWNGGVCTA 607
C + G +C S N G C
Sbjct: 549 CDSDWTGYYCNCTTRTDTCMSSNGLL-------------------------CSGRGKC-- 581
Query: 608 LDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELD 667
+ G G CE + C C +C G + +
Sbjct: 582 -ECGSCVCIQPGSYGDTCEKC--PTCPDACTFKKEC---------VECKKFDRGALHDEN 629
Query: 668 SRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCDLYDP 708
+ N C D I + NC +
Sbjct: 630 TCNR----------YCRDEIESVKELKDTGKDAVNCTYKNE 660
Score = 54.7 bits (131), Expect = 3e-07
Identities = 51/360 (14%), Positives = 90/360 (25%), Gaps = 67/360 (18%)
Query: 1240 QLDECASNPCQ-FGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGIN 1298
L +SN Q + + + + + N + C+
Sbjct: 332 VLSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKI 391
Query: 1299 RYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDEC 1358
+ C + + + + F C+C C + +
Sbjct: 392 GDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCA-------CQAQAEPN 444
Query: 1359 ASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSN------------PCQHGGI 1406
+ GT E G +C C PG+ G +CE ++ + C G
Sbjct: 445 SHRCNNGNGTFECG----VCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGE 500
Query: 1407 CTDHLNGYTCECQIGYTGINCE-------INIDDCAFKPCRHGGTCIDLVNAYKCVCAKA 1459
C C C G + + C G C C+C
Sbjct: 501 CLC----GQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSD 552
Query: 1460 GNHRCDDECNTIACHFDGNDCSLGINPW-INCTANINCWEVFMNGRCDEVCNNPQCL--- 1515
+ G C+ + + C +GR C + C+
Sbjct: 553 ---------------WTGYYCNCTTRTDTCMSSNGLLC-----SGRGKCECGSCVCIQPG 592
Query: 1516 FDGRDCEKN---LQPCNPIYD-AYCQKHYANGHCDYSCNNAECNWDGLDCEREPPSLADG 1571
G CEK C + C+K D + N C + + + D
Sbjct: 593 SYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTCNRYCRDEIESVKELKDTGKDA 652
Score = 46.6 bits (110), Expect = 8e-05
Identities = 37/286 (12%), Positives = 69/286 (24%), Gaps = 59/286 (20%)
Query: 427 GINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVRCLT 486
++ N + +C+ L + C Q+ +
Sbjct: 365 ELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFK-- 422
Query: 487 PGMIVIRSWILVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVNNYHC 546
+I C+ + +GT +C C
Sbjct: 423 ----------------DSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFEC------GVC 460
Query: 547 NCRPGYMGRHCEVKDLAVKVTSMNASPTLAPLTVLWIAYNWSTTTTATAALATWNGGVCT 606
C PG++G CE + + + + V
Sbjct: 461 RCGPGWLGSQCECSEEDYRPSQQDECSPREGQPV--------------------CSQRGE 500
Query: 607 ALDGGHTCICPDNYSGRNCE-------YFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGA 659
L G C+C + G+ + C G C C C
Sbjct: 501 CLCG--QCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC-----GDCLCDSDW 553
Query: 660 TGTHCELDSRNECYSNPCQHAGTCEDRIADYACYCL-PMWNGKNCD 704
TG +C +R + + + + +C C+ P G C+
Sbjct: 554 TGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCE 599
Score = 43.5 bits (102), Expect = 7e-04
Identities = 32/239 (13%), Positives = 52/239 (21%), Gaps = 40/239 (16%)
Query: 249 ECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSI 308
+ + C G + + C + + + I
Sbjct: 367 SLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLI 426
Query: 309 RPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQC 368
C S C NG +C + C+C
Sbjct: 427 VQVTFDCDCACQAQAEPNSHRCNNGNGTFECGV------------------------CRC 462
Query: 369 TPGKTGLLCHLEDACTSNPCHADAICDTNPII---NGSY---TCSCASGYKGVNCSEDIN 422
PG G C + + + G C C S G +
Sbjct: 463 GPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGK--- 519
Query: 423 ECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSAC 481
CE + C G C C+C +TG+ C+ S+
Sbjct: 520 YCECDDFSCVRYKGE---MCSGHGQCSC----GDCLCDSDWTGYYCNCTTRTDTCMSSN 571
Score = 43.5 bits (102), Expect = 7e-04
Identities = 34/259 (13%), Positives = 60/259 (23%), Gaps = 30/259 (11%)
Query: 586 NWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRS 645
++S G + +C ++ N G
Sbjct: 396 SFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTF 455
Query: 646 KEG--------GGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPM 697
+ G G +C+C + + C G C C C
Sbjct: 456 ECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECL----CGQCVCHSS 511
Query: 698 WNGKNCDLYDPLFRGGLGRDTKKQITS--------------LSGFDFELEKEMEKCKQNN 743
GK Y R + + +G+ + C +N
Sbjct: 512 DFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSN 571
Query: 744 CRAKAGNHRCDD-ECNTIACHFDGNDCSLGINPWINCTAN---INCWEVFMNGRCDEVCN 799
+G +C+ C I G+ C CT + C + DE
Sbjct: 572 GLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTC 631
Query: 800 NPQCLFDGRDCEKNLQPCN 818
N C + ++
Sbjct: 632 NRYCRDEIESVKELKDTGK 650
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin
repeat, signaling protein; NMR {Mus musculus} SCOP:
i.11.1.1
Length = 136
Score = 79.4 bits (197), Expect = 2e-17
Identities = 28/109 (25%), Positives = 39/109 (35%), Gaps = 17/109 (15%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
+ L+ A AD N + G+ + + +LL HG P
Sbjct: 26 ETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHD 84
Query: 1871 --REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
REG L A ++ D RLP D+A E+ H DI R L
Sbjct: 85 AAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAA 133
Score = 67.5 bits (166), Expect = 4e-13
Identities = 21/100 (21%), Positives = 31/100 (31%), Gaps = 15/100 (15%)
Query: 1833 ADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP----REGS---YGAC------- 1878
I++ S L AAA ++ V LL G +P R G
Sbjct: 1 GSPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGSAQVA 60
Query: 1879 KALLDNFANREITDHMDR-LPRDVASERLHHDIVRLLDEH 1917
+ LL + A D P A+ D + +L
Sbjct: 61 ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRA 100
Score = 62.5 bits (153), Expect = 2e-11
Identities = 10/45 (22%), Positives = 17/45 (37%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVN 1869
D L A A ++V D G+ + A + D L + +
Sbjct: 92 DTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system,
signal sequence, ankyrin repeat, chromodomain, type I
turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2
k.37.1.1 PDB: 3dep_A 1x32_A
Length = 183
Score = 80.6 bits (200), Expect = 3e-17
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 17/112 (15%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHG--VNPREGSYGA-- 1877
+ S L+ D D++ D +G+TAL + A + + V +L G ++ R+ G
Sbjct: 55 ADEQALSQLL-EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTA 113
Query: 1878 ------------CKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+AL++ A+ E+ D ++A E L +
Sbjct: 114 LHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQF 165
Score = 67.5 bits (166), Expect = 1e-12
Identities = 12/45 (26%), Positives = 16/45 (35%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVN 1869
+ L+ ADI V D G TAL A + + G
Sbjct: 124 EVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRR 168
Score = 62.9 bits (154), Expect = 5e-11
Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 20/109 (18%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
AD+ + +T AA + A++ LL +
Sbjct: 28 PSWVPSSYIAADVV---SEYETPWWTAARKADEQALSQLL-EDRDVDAVDENGRTALLFV 83
Query: 1871 -REGSYGACKALLDNFANREITDHMDRL-PRDVASERLHHDIVRLLDEH 1917
GS + L + A+ + D L +A+ + ++V L E
Sbjct: 84 AGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL 132
Score = 48.6 bits (117), Expect = 3e-06
Identities = 12/95 (12%), Positives = 22/95 (23%), Gaps = 13/95 (13%)
Query: 1835 ADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP------------REGSYGACKALL 1882
+ G + + + R+ A LL
Sbjct: 5 IIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLL 64
Query: 1883 DNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
++ + + D R + VRLL E
Sbjct: 65 ED-RDVDAVDENGRTALLFVAGLGSDKCVRLLAEA 98
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase
(M130), serine/threonine protein phosphatase PP1-beta (OR
delta) catalytic subunit; myosin phosphatase; HET: PGE;
2.70A {Gallus gallus} SCOP: d.211.1.1
Length = 299
Score = 82.2 bits (204), Expect = 8e-17
Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 15/111 (13%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP----------- 1870
D +L + + SG TALH AAA + + +L+ +
Sbjct: 177 MLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPL 236
Query: 1871 ----REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
G AC+ L++N + E + + + DVA E + + L +
Sbjct: 237 HAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQKKQ 287
Score = 74.5 bits (184), Expect = 3e-14
Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 15/105 (14%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
+ L+ ADIN + G TALH A +N+D V L+ +G N
Sbjct: 54 EEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAA 113
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 1914
G + L+ A+ + P D+A E ++++
Sbjct: 114 ASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158
Score = 62.9 bits (154), Expect = 2e-10
Identities = 19/113 (16%), Positives = 35/113 (30%), Gaps = 16/113 (14%)
Query: 1820 LINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP--------- 1870
I ++ + V + G A + + + V LL G +
Sbjct: 17 WIGSETDLEPPVVKRKKTKVKFDDG-AVFLAACSSGDTEEVLRLLERGADINYANVDGLT 75
Query: 1871 ------REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+ + K L++N AN D+ +P A+ + DI L
Sbjct: 76 ALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQ 128
Score = 61.7 bits (151), Expect = 6e-10
Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 9/102 (8%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLS-HGVN--------PREGSY 1875
D A YLI+ A + ++ G T L A + + ++ GV+ R
Sbjct: 120 DIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLR 179
Query: 1876 GACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
A + L N VA+ + + ++++LL +
Sbjct: 180 DARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQA 221
Score = 52.1 bits (126), Expect = 8e-07
Identities = 7/49 (14%), Positives = 14/49 (28%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREG 1873
+ L+ D+ + G+TA A + + E
Sbjct: 246 EACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQKKQNLLHSEK 294
Score = 48.7 bits (117), Expect = 1e-05
Identities = 11/95 (11%), Positives = 25/95 (26%), Gaps = 14/95 (14%)
Query: 1837 INVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE--------------GSYGACKALL 1882
+ + D K + + + + + G LL
Sbjct: 1 MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLL 60
Query: 1883 DNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+ A+ + A + D+V+ L E+
Sbjct: 61 ERGADINYANVDGLTALHQACIDDNVDMVKFLVEN 95
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat,
chromodomain, aromatic CAGE, signal recognit particle,
protein targeting; 3.18A {Arabidopsis thaliana} PDB:
1x3q_A 2hug_A
Length = 244
Score = 81.1 bits (201), Expect = 9e-17
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 17/112 (15%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHG--VNPREGSYGA-- 1877
+ S L+ D D++ D +G+TAL + A + + V +L G ++ R+ G
Sbjct: 56 ADEQALSQLL-EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTA 114
Query: 1878 ------------CKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+AL++ A+ E+ D ++A E L +
Sbjct: 115 LHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQF 166
Score = 70.7 bits (174), Expect = 3e-13
Identities = 17/99 (17%), Positives = 26/99 (26%), Gaps = 8/99 (8%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDN 1884
+ L+ ADI V D G TAL A + + G G L
Sbjct: 125 EVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRI--GLEKVINVLEGQ 182
Query: 1885 FANREITDHM------DRLPRDVASERLHHDIVRLLDEH 1917
D + + + + D + H
Sbjct: 183 VFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVH 221
Score = 61.1 bits (149), Expect = 5e-10
Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 20/109 (18%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
AD+ + +T AA + A++ LL +
Sbjct: 29 PSWVPSSYIAADVV---SEYETPWWTAARKADEQALSQLL-EDRDVDAVDENGRTALLFV 84
Query: 1871 -REGSYGACKALLDNFANREITDHMDRL-PRDVASERLHHDIVRLLDEH 1917
GS + L + A+ + D L +A+ + ++V L E
Sbjct: 85 AGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL 133
Score = 49.5 bits (119), Expect = 3e-06
Identities = 5/43 (11%), Positives = 10/43 (23%)
Query: 1827 ASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVN 1869
+ +I GK + + D + H
Sbjct: 182 QVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAE 224
Score = 47.2 bits (113), Expect = 2e-05
Identities = 12/97 (12%), Positives = 22/97 (22%), Gaps = 13/97 (13%)
Query: 1833 ADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP------------REGSYGACKA 1880
+ G + + + R+ A
Sbjct: 4 NKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQ 63
Query: 1881 LLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
LL++ + + D R + VRLL E
Sbjct: 64 LLED-RDVDAVDENGRTALLFVAGLGSDKCVRLLAEA 99
Score = 37.6 bits (88), Expect = 0.026
Identities = 7/32 (21%), Positives = 11/32 (34%), Gaps = 2/32 (6%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAA 1853
+ DC A+ D + L +A A
Sbjct: 210 DGGDCEWVKGVHVAEDVAKDY--EDGLEYAVA 239
Score = 33.7 bits (78), Expect = 0.44
Identities = 3/46 (6%), Positives = 8/46 (17%), Gaps = 3/46 (6%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHG 1867
+ I + + + I+ G
Sbjct: 155 LKTTPKGNPMQFGRRIGLEKV---INVLEGQVFEYAEVDEIVEKRG 197
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex,
blood coagulation, CL PAIR of basic residues, disulfide
bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Length = 317
Score = 82.1 bits (203), Expect = 1e-16
Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 1354 DVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDEC---GSNPCQHGGICTDH 1410
C S PCL+ G+C+D + + C C PGY G CE +EC ++ CQH C
Sbjct: 4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHF--CLPG 61
Query: 1411 LNGYTCECQIGYTGINCEINIDDCAFKPCRH 1441
YTC C GY C
Sbjct: 62 QESYTCSCAQGYRLGEDHKQCVPHDQCACGV 92
Score = 81.3 bits (201), Expect = 2e-16
Identities = 25/92 (27%), Positives = 34/92 (36%), Gaps = 5/92 (5%)
Query: 1126 TDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGG---ICKD 1182
C S PCL+ G C D I + C C G+ GS+C++ ++C P G C
Sbjct: 3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNEC--HPERTDGCQHFCLP 60
Query: 1183 SIAGYTCECLAGFTGMSCETNINDCASNPCHR 1214
YTC C G+ C
Sbjct: 61 GQESYTCSCAQGYRLGEDHKQCVPHDQCACGV 92
Score = 80.5 bits (199), Expect = 4e-16
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 1164 INIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRGE--CIDGE 1221
C+S PC + G C+DSI GYTC C G+ G +CE N+C + C+ G+
Sbjct: 3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHFCLPGQ 62
Query: 1222 NSFTCACHPGFTGALCNTQLDECASNPC 1249
S+TC+C G+ + Q C
Sbjct: 63 ESYTCSCAQGYRLGEDHKQCVPHDQCAC 90
Score = 79.4 bits (196), Expect = 1e-15
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Query: 1239 TQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGA-KCVDGI 1297
C S PC G C+D I GY C C PG G+NCE+ NEC+ C+ G
Sbjct: 3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHFCLPGQ 62
Query: 1298 NRYSCECLPGYTGLHCETNINECASNPC 1325
Y+C C GY C
Sbjct: 63 ESYTCSCAQGYRLGEDHKQCVPHDQCAC 90
Score = 75.5 bits (186), Expect = 2e-14
Identities = 31/107 (28%), Positives = 40/107 (37%), Gaps = 12/107 (11%)
Query: 1391 FDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDC---AFKPCRHGGTCID 1447
C S PC H G C D + GYTC C GY G NCE+ ++C C+H C+
Sbjct: 3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHF--CLP 60
Query: 1448 LVNAYKCVCAKAGNHRCDDECNTIACHFD-------GNDCSLGINPW 1487
+Y C CA+ D + L PW
Sbjct: 61 GQESYTCSCAQGYRLGEDHKQCVPHDQCACGVLTSEKRAPDLQDLPW 107
Score = 71.7 bits (176), Expect = 3e-13
Identities = 25/114 (21%), Positives = 39/114 (34%), Gaps = 29/114 (25%)
Query: 985 DDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFI 1044
C S PC + G+C D + Y+C C G+ G +CE+ +EC
Sbjct: 6 SPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERT-------------- 51
Query: 1045 FFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPC 1098
C+H C+ S+ C+C QG+ + C
Sbjct: 52 -------------DGCQHF--CLPGQESYTCSCAQGYRLGEDHKQCVPHDQCAC 90
Score = 71.7 bits (176), Expect = 4e-13
Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Query: 1091 NECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGG-ICNDLINTF 1149
+ C S PC ++GSC D + C C PG+ G+ CE +EC C ++
Sbjct: 6 SPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHFCLPGQESY 65
Query: 1150 KCACPIGFTGSHCQINIDDCVSSPCHN 1176
C+C G+ C
Sbjct: 66 TCSCAQGYRLGEDHKQCVPHDQCACGV 92
Score = 70.9 bits (174), Expect = 6e-13
Identities = 23/90 (25%), Positives = 30/90 (33%), Gaps = 1/90 (1%)
Query: 1315 TNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGG-TCEDGL 1373
+ C S PC + G C D I G+ C C GY + C +EC + C G
Sbjct: 3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHFCLPGQ 62
Query: 1374 NQFICHCKPGYGGKRCEFDIDECGSNPCQH 1403
+ C C GY C
Sbjct: 63 ESYTCSCAQGYRLGEDHKQCVPHDQCACGV 92
Score = 67.8 bits (166), Expect = 6e-12
Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 3/87 (3%)
Query: 266 DDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDEC-SIRPSVCHNGATCTNSVG 324
C C + +C D I Y+C C Y G CE +EC R C + C
Sbjct: 6 SPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHF--CLPGQE 63
Query: 325 GFSCICVNGWTGPDCSLNIDDCAGAAC 351
++C C G+ + AC
Sbjct: 64 SYTCSCAQGYRLGEDHKQCVPHDQCAC 90
Score = 65.9 bits (161), Expect = 3e-11
Identities = 29/103 (28%), Positives = 36/103 (34%), Gaps = 12/103 (11%)
Query: 187 NECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGG---VCREL 243
+ C S PC ++GSC D + C C PGY G NCE C P + G C
Sbjct: 6 SPCISQPCLHNGSCQDSIWGYTCTCS--PGYEGSNCELAKNEC--HPERTDGCQHFCLPG 61
Query: 244 DNLNYECECQSGYRGKNCEENIDDCP----GNLCQNGATCMDG 282
+Y C C GYR + G L
Sbjct: 62 QE-SYTCSCAQGYRLGEDHKQCVPHDQCACGVLTSEKRAPDLQ 103
Score = 65.9 bits (161), Expect = 3e-11
Identities = 22/87 (25%), Positives = 28/87 (32%), Gaps = 2/87 (2%)
Query: 906 DPCVPNRCQHGARCTPSANFQDFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNG 965
PC+ C H C S + C C G+ G C +EC C
Sbjct: 6 SPCISQPCLHNGSCQDS--IWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHFCLPGQE 63
Query: 966 SYLCECAKGYEGRDCLINTDDCASFPC 992
SY C CA+GY + C
Sbjct: 64 SYTCSCAQGYRLGEDHKQCVPHDQCAC 90
Score = 65.1 bits (159), Expect = 6e-11
Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 2/90 (2%)
Query: 944 DVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGG-TCLDEV 1002
C +S PC + +C ++ Y C C+ GYEG +C + ++C CL
Sbjct: 4 GGSPC-ISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHFCLPGQ 62
Query: 1003 GDYSCLCVDGFSGKHCEVDIDECSSNPCHN 1032
Y+C C G+ C
Sbjct: 63 ESYTCSCAQGYRLGEDHKQCVPHDQCACGV 92
Score = 64.7 bits (158), Expect = 8e-11
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 38 NSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCEL--QDHCASSPCRNGAVCTSLEDT 95
+ C S PC++ G+C S+ YTCTC+PG+ GS CEL + C +++
Sbjct: 6 SPCISQPCLHNGSCQ-DSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHFCLPGQES 64
Query: 96 YECDCAPGFVGQTCSEDIIECVDDPCVH 123
Y C CA G+ + + C
Sbjct: 65 YTCSCAQGYRLGEDHKQCVPHDQCACGV 92
Score = 64.3 bits (157), Expect = 8e-11
Identities = 23/101 (22%), Positives = 33/101 (32%), Gaps = 7/101 (6%)
Query: 225 KYV---PCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGA-TCM 280
+Y PC PC + G C++ Y C C GY G NCE ++C C+
Sbjct: 1 RYKGGSPCISQPCLHNGSCQDSIW-GYTCTCSPGYEGSNCELAKNECHPERTDGCQHFCL 59
Query: 281 DGINKYSCLCLATYTGDLCEQDVDECSIRPS--VCHNGATC 319
G Y+C C Y + +
Sbjct: 60 PGQESYTCSCAQGYRLGEDHKQCVPHDQCACGVLTSEKRAP 100
Score = 64.3 bits (157), Expect = 9e-11
Identities = 23/90 (25%), Positives = 28/90 (31%), Gaps = 2/90 (2%)
Query: 1202 TNINDCASNPC-HRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQ-CEDLI 1259
+ C S PC H G C D +TC C PG+ G+ C +EC C
Sbjct: 3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHFCLPGQ 62
Query: 1260 NGYQCRCKPGTSGTNCEININECYSNPCRN 1289
Y C C G C
Sbjct: 63 ESYTCSCAQGYRLGEDHKQCVPHDQCACGV 92
Score = 59.7 bits (145), Expect = 3e-09
Identities = 23/119 (19%), Positives = 33/119 (27%), Gaps = 34/119 (28%)
Query: 76 DHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGECFNTHGSYTF 135
C S PC + C Y C C+PG+ G C EC +
Sbjct: 6 SPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERT-------------- 51
Query: 136 QMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPC 194
C+H C+ S+ C+C QG+ + C
Sbjct: 52 ------------------DGCQHF--CLPGQESYTCSCAQGYRLGEDHKQCVPHDQCAC 90
Score = 59.7 bits (145), Expect = 3e-09
Identities = 25/120 (20%), Positives = 37/120 (30%), Gaps = 35/120 (29%)
Query: 1020 VDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQ 1079
C S PC + G+C ++ + C C+
Sbjct: 3 KGGSPCISQPCLHN------------------------------GSCQDSIWGYTCTCSP 32
Query: 1080 GFTGPRCETNVNECESHPCQNDGS---CLDDPGTFRCVCMPGFTGTQCETDIDECASNPC 1136
G+ G CE NEC HP + DG CL ++ C C G+ + C
Sbjct: 33 GYEGSNCELAKNEC--HPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCAC 90
Score = 59.3 bits (144), Expect = 4e-09
Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 15/104 (14%)
Query: 381 DACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFK 440
C S PC + C + YTC+C+ GY+G NC NEC
Sbjct: 6 SPCISQPCLHNGSCQDSI---WGYTCTCSPGYEGSNCELAKNECHPERT----------D 52
Query: 441 PCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVRC 484
C+H C+ +Y C C Y + H++ P + V
Sbjct: 53 GCQHF--CLPGQESYTCSCAQGYRLGEDHKQCVPHDQCACGVLT 94
Score = 57.8 bits (140), Expect = 1e-08
Identities = 23/94 (24%), Positives = 34/94 (36%), Gaps = 7/94 (7%)
Query: 865 INIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVP---NRCQHGARCTP 921
C +PC H G+C D + Y C C Y G +C + C P + CQH C P
Sbjct: 3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHF--CLP 60
Query: 922 SANFQDFACHCGVGWTGRYCNEDVDECQLSSPCR 955
+ C C G+ ++ +
Sbjct: 61 GQE--SYTCSCAQGYRLGEDHKQCVPHDQCACGV 92
Score = 57.4 bits (139), Expect = 2e-08
Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Query: 627 YFGYD-CDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRN--ECYSNPCQHAGTC 683
Y G C S PC + G C+ GY C C PG G++CEL ++ CQH C
Sbjct: 2 YKGGSPCISQPCLHNGSCQ-DSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FC 58
Query: 684 EDRIADYACYCLPMWNGKNC 703
Y C C +
Sbjct: 59 LPGQESYTCSCAQGYRLGED 78
Score = 52.8 bits (127), Expect = 5e-07
Identities = 18/86 (20%), Positives = 22/86 (25%), Gaps = 2/86 (2%)
Query: 601 NGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGG-FCRSKEGGGYRCDCPPGA 659
+ G C G+TC C Y G NCE +C FC + Y C C G
Sbjct: 15 HNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHFCLPGQ-ESYTCSCAQGY 73
Query: 660 TGTHCELDSRNECYSNPCQHAGTCED 685
Sbjct: 74 RLGEDHKQCVPHDQCACGVLTSEKRA 99
Score = 47.0 bits (112), Expect = 3e-05
Identities = 15/48 (31%), Positives = 20/48 (41%)
Query: 432 INIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNS 479
C +PC H G+C D + Y C C Y G +C + C P
Sbjct: 3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPER 50
Score = 47.0 bits (112), Expect = 4e-05
Identities = 20/83 (24%), Positives = 28/83 (33%), Gaps = 5/83 (6%)
Query: 344 DDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLC--HLEDACTSNPCHADAICDTNPIIN 401
C C + +C D + + C C+PG G C + C
Sbjct: 6 SPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHFCLPGQ--- 62
Query: 402 GSYTCSCASGYKGVNCSEDINEC 424
SYTCSCA GY+ +
Sbjct: 63 ESYTCSCAQGYRLGEDHKQCVPH 85
Score = 46.2 bits (110), Expect = 6e-05
Identities = 20/84 (23%), Positives = 26/84 (30%), Gaps = 14/84 (16%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHN-NGTCVD 1675
H G C D + GYTC C GY G CE+ +C P C+
Sbjct: 14 LHNGSCQDSIWGYTCTCSPGYEGSN-------------CELAKNECHPERTDGCQHFCLP 60
Query: 1676 KVGGFECRCPPGFVGSRWTDAECF 1699
+ C C G+
Sbjct: 61 GQESYTCSCAQGYRLGEDHKQCVP 84
Score = 46.2 bits (110), Expect = 6e-05
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 670 NECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCDL 705
+ C S PC H G+C+D I Y C C P + G NC+L
Sbjct: 6 SPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCEL 41
Score = 45.9 bits (109), Expect = 9e-05
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 520 DINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEV 559
+ C+S PC +G+ C + Y C C PGY G +CE+
Sbjct: 4 GGSPCISQPCLHNGS--CQDSIWGYTCTCSPGYEGSNCEL 41
Score = 42.4 bits (100), Expect = 0.001
Identities = 19/86 (22%), Positives = 29/86 (33%), Gaps = 7/86 (8%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYT 60
C + G+C Y+ C+C G+ S CE+ C + YT
Sbjct: 13 CLHNGSC-QDSIWGYT----CTCSPGYEGSNCELAKNECHPERTDGCQHFCLPGQ-ESYT 66
Query: 61 CTCAPGFTGSQCELQ-DHCASSPCRN 85
C+CA G+ + Q C
Sbjct: 67 CSCAQGYRLGEDHKQCVPHDQCACGV 92
Score = 41.2 bits (97), Expect = 0.003
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 1662 CLPGACHNNGTCVDKVGGFECRCPPGFVG 1690
C+ C +NG+C D + G+ C C PG+ G
Sbjct: 8 CISQPCLHNGSCQDSIWGYTCTCSPGYEG 36
Score = 33.1 bits (76), Expect = 0.72
Identities = 25/135 (18%), Positives = 37/135 (27%), Gaps = 56/135 (41%)
Query: 1429 INIDDCAFKPCRHGGTCIDLVNAYKCVCAKAGNHRCDDECNTIACHFDGNDCSLGINPWI 1488
C +PC H G+C D + Y C CS G
Sbjct: 3 KGGSPCISQPCLHNGSCQDSIWGYTC------------------------TCSPG----- 33
Query: 1489 NCTANINCWEVFMNGRCDEVCNNPQCLFDGRDCEKNLQPCNPIYDAYCQKHYANGHCDYS 1548
++G +CE C+P CQ G Y+
Sbjct: 34 ---------------------------YEGSNCELAKNECHPERTDGCQHFCLPGQESYT 66
Query: 1549 CNNAECNWDGLDCER 1563
C+ A+ G D ++
Sbjct: 67 CSCAQGYRLGEDHKQ 81
Score = 30.4 bits (69), Expect = 5.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 1804 GSYLCECAKGYEGRDCLINTDDC 1826
Y C C+ GYEG +C + ++C
Sbjct: 24 WGYTCTCSPGYEGSNCELAKNEC 46
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium,
SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo
sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Length = 167
Score = 78.2 bits (194), Expect = 1e-16
Identities = 29/108 (26%), Positives = 37/108 (34%), Gaps = 15/108 (13%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
+ I + IN D G T L WAAA I V LL +G +P
Sbjct: 17 LYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLA 76
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+G K LLD + D P A H V++L E
Sbjct: 77 CSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLES 124
Score = 71.3 bits (176), Expect = 4e-14
Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 18/93 (19%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDN 1884
D L++ D+N D +G T L +A N++ V +LL G
Sbjct: 83 DIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG----------------- 125
Query: 1885 FANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
A+ I D+A + + ++++ H
Sbjct: 126 -ADPTIETDSGYNSMDLAVALGYRSVQQVIESH 157
Score = 65.9 bits (162), Expect = 3e-12
Identities = 10/45 (22%), Positives = 20/45 (44%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVN 1869
C L+ + AD + +SG ++ A A+ ++ SH +
Sbjct: 116 KCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK 160
Score = 56.6 bits (138), Expect = 4e-09
Identities = 13/90 (14%), Positives = 29/90 (32%), Gaps = 15/90 (16%)
Query: 1843 SGKTALHWAAAVNNIDAVNILLSHGVNP---------------REGSYGACKALLDNFAN 1887
+ ++H AA + + + G + LL N A+
Sbjct: 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD 61
Query: 1888 REITDHMDRLPRDVASERLHHDIVRLLDEH 1917
++ +A + + DIV++L +
Sbjct: 62 PQLLGKGRESALSLACSKGYTDIVKMLLDC 91
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A
{Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Length = 156
Score = 77.8 bits (193), Expect = 1e-16
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 16/109 (14%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
A L+ A NV D SG + +H AA +D + +L+ HG +
Sbjct: 49 AIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLA 108
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHI 1918
+EG L ++ D P ++A +R D+V +L H+
Sbjct: 109 VQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGHM 156
Score = 73.6 bits (182), Expect = 4e-15
Identities = 22/111 (19%), Positives = 36/111 (32%), Gaps = 16/111 (14%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP----------- 1870
+ + L + + GKTAL + LL G +P
Sbjct: 14 DVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGASPNVQDTSGTSPV 72
Query: 1871 ----REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
R G K L+++ A+ + D LP +A + H +V L
Sbjct: 73 HDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123
Score = 50.5 bits (122), Expect = 5e-07
Identities = 20/89 (22%), Positives = 30/89 (33%), Gaps = 15/89 (16%)
Query: 1844 GKTALHWAAAVNNIDAVNILL-SHGVNPREG-----------SYG---ACKALLDNFANR 1888
L AAA ++ V LL V+P +G LL A+
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASP 61
Query: 1889 EITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+ D P A+ D +++L EH
Sbjct: 62 NVQDTSGTSPVHDAARTGFLDTLKVLVEH 90
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Length = 126
Score = 76.6 bits (190), Expect = 2e-16
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 15/108 (13%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
+ L+ A AD+N D +G+T LH AA +++ V +LL G +
Sbjct: 16 EVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLA 75
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
R G K LL+ A+ D R P +A+ H ++V+LL E
Sbjct: 76 ARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123
Score = 60.4 bits (148), Expect = 8e-11
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHG 1867
+ L+ A AD+N D +G+T LH AA +++ V +LL G
Sbjct: 82 EVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124
Score = 53.9 bits (131), Expect = 2e-08
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 15/90 (16%)
Query: 1843 SGKTALHWAAAVNNIDAVNILLSHGVNP---------------REGSYGACKALLDNFAN 1887
+G+T LH AA +++ V +LL G + R G K LL+ A+
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 1888 REITDHMDRLPRDVASERLHHDIVRLLDEH 1917
D R P +A+ H ++V+LL E
Sbjct: 61 VNAKDKNGRTPLHLAARNGHLEVVKLLLEA 90
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene
family, nuclear protein, phosphorylation, disease
mutation, polymorphism; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.211.1.1 PDB: 4a63_B
Length = 239
Score = 79.6 bits (197), Expect = 3e-16
Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 18/111 (16%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
D +I D ++P++ G TALH A + + V L+ GVN
Sbjct: 51 DLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCA 110
Query: 1871 -REGSYGACKALLDNFANREITDHMD---RLPRDVASERLHHDIVRLLDEH 1917
+ CK L+++ A + D + E + + L
Sbjct: 111 ASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 161
Score = 67.6 bits (166), Expect = 2e-12
Identities = 15/108 (13%), Positives = 27/108 (25%), Gaps = 16/108 (14%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
S I + + L ++ D V ++ +P
Sbjct: 19 KTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNA 77
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
G K L+ N D P A+ + + + L E
Sbjct: 78 VCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVES 125
Score = 61.1 bits (149), Expect = 4e-10
Identities = 11/92 (11%), Positives = 30/92 (32%), Gaps = 14/92 (15%)
Query: 1840 PDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYG------AC--------KALLDNF 1885
P+ +G+ +L N + ++HG+ + + + ++
Sbjct: 1 PEITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEV 60
Query: 1886 ANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+ + + A H +IV+ L +
Sbjct: 61 DDPSLPNDEGITALHNAVCAGHTEIVKFLVQF 92
Score = 52.6 bits (127), Expect = 3e-07
Identities = 11/95 (11%), Positives = 18/95 (18%), Gaps = 7/95 (7%)
Query: 1825 DCASYLINADADINVPDNSGK---TALHWAAAVNNIDAVNILLSHGVNPREGSYGACKAL 1881
+L+ + A + S L + G AL
Sbjct: 117 QVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYAL 176
Query: 1882 LDNFAN--REITDHMDRLPRDVASERLHHDIVRLL 1914
D E+ R D +
Sbjct: 177 WDYEPQNDDELPMKEGDCM--TIIHREDEDEIEWW 209
Score = 51.5 bits (124), Expect = 7e-07
Identities = 7/66 (10%), Positives = 18/66 (27%), Gaps = 2/66 (3%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-REGSYGACKALLD 1883
C+ +L + + + AL N D + + + +
Sbjct: 153 QCSQFLYGVQEKMGIMNKGVIYALWDYEP-QNDDELPMKEGDCMTIIHREDEDEIEWWWA 211
Query: 1884 NFANRE 1889
++E
Sbjct: 212 RLNDKE 217
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription
regulation, autoantibody; 2.58A {Homo sapiens}
Length = 261
Score = 79.8 bits (198), Expect = 3e-16
Identities = 24/107 (22%), Positives = 35/107 (32%), Gaps = 14/107 (13%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYG------AC 1878
C L+ A +N T L A + D VN+LL HG + + S A
Sbjct: 50 SCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAA 109
Query: 1879 --------KALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+L+ N + P +A E V+ L E
Sbjct: 110 RRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLES 156
Score = 78.6 bits (195), Expect = 7e-16
Identities = 18/107 (16%), Positives = 35/107 (32%), Gaps = 16/107 (14%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYG------AC 1878
+C + LI +I+ + T L+ A V LL G + +G
Sbjct: 115 ECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVA 174
Query: 1879 --------KALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
L+D A+ + + + P ++ + +L E
Sbjct: 175 RTASEELACLLMDFGADTQAKNAEGKRPVELVPPESP--LAQLFLER 219
Score = 72.9 bits (180), Expect = 6e-14
Identities = 23/108 (21%), Positives = 36/108 (33%), Gaps = 16/108 (14%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
LI+ +N+ + LH A ++ V ILL HG
Sbjct: 17 LSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNA 76
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
GS+ LL + A+ + P A+ R H + V L +
Sbjct: 77 CVSGSWDCVNLLLQHGASVQPESD-LASPIHEAARRGHVECVNSLIAY 123
Score = 68.2 bits (168), Expect = 3e-12
Identities = 12/93 (12%), Positives = 24/93 (25%), Gaps = 20/93 (21%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDN 1884
+ A L++ AD + GK + + + + L
Sbjct: 180 ELACLLMDFGADTQAKNAEGKRPVELVPPESPL--AQLFLERE----------------- 220
Query: 1885 FANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+ R + HH I +L+
Sbjct: 221 -GPPSLMQLCRLRIRKCFGIQQHHKITKLVLPE 252
Score = 56.7 bits (138), Expect = 2e-08
Identities = 2/43 (4%), Positives = 9/43 (20%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHG 1867
A + + ++ + ++L
Sbjct: 211 PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPED 253
Score = 55.5 bits (135), Expect = 5e-08
Identities = 19/90 (21%), Positives = 27/90 (30%), Gaps = 15/90 (16%)
Query: 1843 SGKTALHWAAAVNNIDAVNILLSHGVNP---------------REGSYGACKALLDNFAN 1887
S + +H AA + ++ L+S G G K LL + A
Sbjct: 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ 61
Query: 1888 REITDHMDRLPRDVASERLHHDIVRLLDEH 1917
P A D V LL +H
Sbjct: 62 VNGVTADWHTPLFNACVSGSWDCVNLLLQH 91
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A
{Homo sapiens} SCOP: d.211.1.1
Length = 437
Score = 82.5 bits (205), Expect = 3e-16
Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 15/108 (13%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
A L+ DA N +G T LH A NN+D V +LL G +P
Sbjct: 160 RVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIA 219
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
++ ++LL + P +A++ H ++V LL
Sbjct: 220 AKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSK 267
Score = 81.4 bits (202), Expect = 8e-16
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 15/108 (13%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
+ + L++ A+ N+ + SG T LH A ++ ++L+ HGV
Sbjct: 259 EMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVA 318
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
G+ K LL + A+ + P A+++ H DIV LL ++
Sbjct: 319 SHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKN 366
Score = 81.0 bits (201), Expect = 8e-16
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 15/108 (13%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
+ A YL+ A +N +T LH AA + + + V +LL + NP
Sbjct: 61 EVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIA 120
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
REG ALL+ A++ P VA++ + LL E
Sbjct: 121 AREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLER 168
Score = 79.8 bits (198), Expect = 2e-15
Identities = 25/108 (23%), Positives = 36/108 (33%), Gaps = 15/108 (13%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
L+ A NV + +T LH AA + + LL +
Sbjct: 28 PIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCA 87
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
R G K LL+N AN + P +A+ H + V L E
Sbjct: 88 ARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 135
Score = 77.9 bits (193), Expect = 9e-15
Identities = 26/108 (24%), Positives = 39/108 (36%), Gaps = 15/108 (13%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
+ A L+ N G T LH AA + + V +LLS N
Sbjct: 226 EVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLV 285
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+EG L+ + + T M P VAS + +V+ L +H
Sbjct: 286 AQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQH 333
Score = 77.5 bits (192), Expect = 1e-14
Identities = 18/108 (16%), Positives = 34/108 (31%), Gaps = 15/108 (13%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
+ L+ +A G T LH AA + +LL +P
Sbjct: 127 ETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVA 186
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+ K LL + P +A+++ ++ R L ++
Sbjct: 187 VHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQY 234
Score = 73.7 bits (182), Expect = 2e-13
Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 18/94 (19%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDN 1884
+L+ AD+N G + LH AA + D V +LL +G +P
Sbjct: 325 KLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASP-------------- 370
Query: 1885 FANREITDHMDRLPRDVASERLHHDIVRLLDEHI 1918
P +A + + +L
Sbjct: 371 ----NEVSSDGTTPLAIAKRLGYISVTDVLKVVT 400
Score = 72.9 bits (180), Expect = 3e-13
Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 15/98 (15%)
Query: 1835 ADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP---------------REGSYGACK 1879
SG T LH A+ + ++ V LL G +P R G K
Sbjct: 5 ISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAK 64
Query: 1880 ALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
LL N A D+ P A+ H ++V+LL E+
Sbjct: 65 YLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLEN 102
Score = 56.7 bits (138), Expect = 4e-08
Identities = 10/49 (20%), Positives = 16/49 (32%), Gaps = 3/49 (6%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNIL---LSHGVNP 1870
D + L+ A N + G T L A + I ++L
Sbjct: 358 DIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFV 406
Score = 35.5 bits (83), Expect = 0.18
Identities = 7/68 (10%), Positives = 15/68 (22%), Gaps = 17/68 (25%)
Query: 1811 AKGYEGRDCLI-----NTDDCASYL---INADADINVPDNSGKTALHWAAAVNNIDAVNI 1862
+G L L + + + V D + V+
Sbjct: 372 EVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPE---------TVDE 422
Query: 1863 LLSHGVNP 1870
+L +
Sbjct: 423 ILDVSEDE 430
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3,
ankyrin repeat, signaling protein, ANK repeat, cytoplasm,
phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Length = 222
Score = 78.8 bits (195), Expect = 4e-16
Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 16/109 (14%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSH-GVNP------------- 1870
++ +N D +G TAL+WA + D V +L + +
Sbjct: 87 SWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHA 146
Query: 1871 --REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+G + LL A ++ + +L D+A+ +++
Sbjct: 147 AAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGT 195
Score = 65.0 bits (159), Expect = 2e-11
Identities = 7/63 (11%), Positives = 14/63 (22%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDN 1884
D L+ A ++ + K A A + + D+
Sbjct: 154 DIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDS 213
Query: 1885 FAN 1887
Sbjct: 214 DLE 216
Score = 61.9 bits (151), Expect = 2e-10
Identities = 16/104 (15%), Positives = 28/104 (26%), Gaps = 16/104 (15%)
Query: 1830 LINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP---------------REGS 1874
+ + S LH AA N+ + L + V G
Sbjct: 59 GLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGH 118
Query: 1875 YGACKALLDNF-ANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+ L + + A+ + + DIV+LL
Sbjct: 119 KDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAK 162
Score = 48.8 bits (117), Expect = 4e-06
Identities = 9/90 (10%), Positives = 21/90 (23%), Gaps = 10/90 (11%)
Query: 1838 NVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGS-------YGACK---ALLDNFAN 1887
P G+ + A + L + + + L
Sbjct: 6 PKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNY 65
Query: 1888 REITDHMDRLPRDVASERLHHDIVRLLDEH 1917
P A++R + +R ++
Sbjct: 66 VAEQAESIDNPLHEAAKRGNLSWLRECLDN 95
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats,
A-helical domain, structural genomics, NPPSFA; 2.20A
{Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A
1ixv_A 1wg0_A
Length = 228
Score = 78.3 bits (194), Expect = 5e-16
Identities = 20/111 (18%), Positives = 43/111 (38%), Gaps = 20/111 (18%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
+ + +LI A + + D + LH AA+V ++ + +L G +
Sbjct: 121 EVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFH 180
Query: 1871 --REGSYGACKALLDNF-ANREITDHMDRLPRDVASERLHHDIVRLLDEHI 1918
EG A L++ + A ++ D+ DVA + + + ++
Sbjct: 181 ALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNV 228
Score = 72.1 bits (178), Expect = 7e-14
Identities = 17/116 (14%), Positives = 35/116 (30%), Gaps = 20/116 (17%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP----------- 1870
L + + + D G+ LHW+ + + + LLS N
Sbjct: 14 EFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGW 73
Query: 1871 -------REGSYGACKALLDNF--ANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
G+ K+L D + + +A + ++ + L E+
Sbjct: 74 TPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN 129
Score = 69.0 bits (170), Expect = 7e-13
Identities = 22/108 (20%), Positives = 31/108 (28%), Gaps = 18/108 (16%)
Query: 1825 DCASYLIN--ADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE---------- 1872
+ L + D+N N G T LH A + L+ +G + R
Sbjct: 86 EVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLH 145
Query: 1873 -----GSYGACKALLDNFANR-EITDHMDRLPRDVASERLHHDIVRLL 1914
GS + L + D P A H D LL
Sbjct: 146 RAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLL 193
Score = 47.8 bits (115), Expect = 1e-05
Identities = 16/93 (17%), Positives = 27/93 (29%), Gaps = 19/93 (20%)
Query: 1844 GKTALHWAAAVNNIDAV-NILLSHGVNP---------------REGSYGACKALLDNFAN 1887
LH A N V +L S ++ LL N
Sbjct: 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN 61
Query: 1888 REITDHMDRL---PRDVASERLHHDIVRLLDEH 1917
+ D+ D P +A + ++V+ L +
Sbjct: 62 VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDR 94
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding;
HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Length = 192
Score = 77.0 bits (191), Expect = 7e-16
Identities = 23/108 (21%), Positives = 38/108 (35%), Gaps = 15/108 (13%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
A L++ +++N D SGKT L W+ + LL HG N
Sbjct: 82 GIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVA 141
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+ G K LL+ A+ D A +++++ E
Sbjct: 142 SKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEV 189
Score = 75.9 bits (188), Expect = 2e-15
Identities = 29/127 (22%), Positives = 42/127 (33%), Gaps = 20/127 (15%)
Query: 1811 AKGYEGRDCLI-----NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLS 1865
+ R L+ ++ L+ + D G TAL WA N + LLS
Sbjct: 30 YRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLS 89
Query: 1866 HGVNP---------------REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDI 1910
G N G LL++ AN + P VAS+ +I
Sbjct: 90 KGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEI 149
Query: 1911 VRLLDEH 1917
V+ L E
Sbjct: 150 VKKLLEL 156
Score = 67.0 bits (165), Expect = 2e-12
Identities = 19/109 (17%), Positives = 35/109 (32%), Gaps = 17/109 (15%)
Query: 1826 CASYLI--NADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP------------- 1870
I N D N D+ +T L A + +A++ L+ +
Sbjct: 15 KDEKSINQNLDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIW 74
Query: 1871 --REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+ G + LL +N D + P + + ++ L EH
Sbjct: 75 AVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEH 123
>1awc_B Protein (GA binding protein beta 1); complex (transcription
regulation/DNA), DNA-binding, nuclear protein, ETS
domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus
musculus} SCOP: d.211.1.1
Length = 153
Score = 75.5 bits (187), Expect = 7e-16
Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 15/103 (14%)
Query: 1827 ASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP---------------R 1871
L+ A + +T LH AA+ + + V +LL HG +
Sbjct: 50 TEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATE 109
Query: 1872 EGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 1914
+ L+ A+ + D++ + + D+ +L
Sbjct: 110 HNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 70.9 bits (175), Expect = 3e-14
Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 16/111 (14%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP----------- 1870
DD L+ A D G + LH AA + +LL GV+
Sbjct: 13 GQDDEVRILMANGAPFTT-DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPL 71
Query: 1871 ----REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
EG + LL + A+ D + A+E H ++V LL ++
Sbjct: 72 HMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122
Score = 56.2 bits (137), Expect = 4e-09
Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 1844 GKTALHWAAAVNNIDAVNILLSHGVN---------P-----REGSYGACKALLDNFANRE 1889
L AA D V IL+++G P + G + + LL +R+
Sbjct: 2 LGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD 61
Query: 1890 ITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+DR P +A+ H +IV +L +H
Sbjct: 62 ARTKVDRTPLHMAASEGHANIVEVLLKH 89
Score = 52.0 bits (126), Expect = 1e-07
Identities = 11/39 (28%), Positives = 15/39 (38%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNIL 1863
+ LI AD++ KTA + N D IL
Sbjct: 114 EVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS
box-containing...; ASB9, ANK repeat, L-shaped, structural
protein; 2.20A {Homo sapiens}
Length = 285
Score = 79.1 bits (196), Expect = 8e-16
Identities = 24/107 (22%), Positives = 35/107 (32%), Gaps = 14/107 (13%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYG------AC 1878
C L+ A +N T L A + D VN+LL HG + + S A
Sbjct: 106 SCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAA 165
Query: 1879 --------KALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+L+ N + P +A E V+ L E
Sbjct: 166 RRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLES 212
Score = 74.5 bits (184), Expect = 3e-14
Identities = 17/107 (15%), Positives = 34/107 (31%), Gaps = 15/107 (14%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYG------AC 1878
+C + LI +I+ + T L+ A V LL G + +G
Sbjct: 171 ECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVV 230
Query: 1879 --------KALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
L+D A+ + + + P ++ + L+
Sbjct: 231 RTASEELACLLMDFGADTQAKNAEGKRPVELVPPESPLAQL-FLERE 276
Score = 72.1 bits (178), Expect = 2e-13
Identities = 23/108 (21%), Positives = 36/108 (33%), Gaps = 16/108 (14%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
LI+ +N+ + LH A ++ V ILL HG
Sbjct: 73 LSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNA 132
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
GS+ LL + A+ + P A+ R H + V L +
Sbjct: 133 CVSGSWDCVNLLLQHGASVQPESD-LASPIHEAARRGHVECVNSLIAY 179
Score = 57.5 bits (140), Expect = 1e-08
Identities = 22/139 (15%), Positives = 34/139 (24%), Gaps = 46/139 (33%)
Query: 1825 DCASYLINADADINVPDN-------------------------------SGKTALHWAAA 1853
+S L+ + + D S + +H AA
Sbjct: 9 HHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAI 68
Query: 1854 VNNIDAVNILLSHGVNP---------------REGSYGACKALLDNFANREITDHMDRLP 1898
+ ++ L+S G G K LL + A P
Sbjct: 69 HGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTP 128
Query: 1899 RDVASERLHHDIVRLLDEH 1917
A D V LL +H
Sbjct: 129 LFNACVSGSWDCVNLLLQH 147
Score = 33.6 bits (78), Expect = 0.56
Identities = 13/82 (15%), Positives = 24/82 (29%), Gaps = 17/82 (20%)
Query: 1851 AAAVNNIDAVNILLSHG--VNPREGSYGACKA-------------LLDNFANREITDHMD 1895
++ ++ + L+ G + +G G LL N + D
Sbjct: 2 GSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVS--D 59
Query: 1896 RLPRDVASERLHHDIVRLLDEH 1917
P A+ H +R L
Sbjct: 60 WSPMHEAAIHGHQLSLRNLISQ 81
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein,
human epidermal growth factor receptor 2, de novo
protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Length = 136
Score = 74.7 bits (185), Expect = 1e-15
Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 15/111 (13%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP----------- 1870
DD L+ AD+N D G T L+ A A +++ V +LL +G +
Sbjct: 25 GQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPL 84
Query: 1871 ----REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
G + LL + A+ D + D++ + D+ +L +
Sbjct: 85 HLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135
Score = 56.6 bits (138), Expect = 2e-09
Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 22/106 (20%)
Query: 1827 ASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP---------------R 1871
+ + + +D+ L AA D V IL+++G +
Sbjct: 4 SHHHHHHGSDLG-------KKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATA 56
Query: 1872 EGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
G + LL N A+ D + P +A+ H +I +L +H
Sbjct: 57 HGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKH 102
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase,
P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET:
PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A
1uoh_A 1qym_A
Length = 231
Score = 77.6 bits (191), Expect = 1e-15
Identities = 25/111 (22%), Positives = 39/111 (35%), Gaps = 15/111 (13%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP----------- 1870
D+ ++ + D +TALHWA + + + V LL GV
Sbjct: 18 KLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPL 77
Query: 1871 ----REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
G KALL A+ + P A+ + H+I +L E
Sbjct: 78 HIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEG 128
Score = 57.2 bits (138), Expect = 8e-09
Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 15/111 (13%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP----------- 1870
D+ L+ A +N + +G T LH+AA+ N + +LL G NP
Sbjct: 84 GXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAM 143
Query: 1871 ----REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+G+ LL A+ I D P +A + + + L
Sbjct: 144 HRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQ 194
Score = 50.3 bits (120), Expect = 2e-06
Identities = 16/96 (16%), Positives = 28/96 (29%), Gaps = 20/96 (20%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKAL 1881
L+ A N+ D G T LH A ++ L++ G
Sbjct: 150 GNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQG-------------- 195
Query: 1882 LDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
A+ I + ++ P VA ++
Sbjct: 196 ----ASIYIENKEEKTPLQVAKG--GLGLILKRLAE 225
Score = 48.7 bits (116), Expect = 6e-06
Identities = 10/49 (20%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP 1870
+ A +L+ A I + + KT L A + + L+ G
Sbjct: 183 ERVEEAKFLVTQGASIYIENKEEKTPLQVAK--GGLGLILKRLAEGEEA 229
Score = 42.9 bits (101), Expect = 4e-04
Identities = 12/91 (13%), Positives = 22/91 (24%), Gaps = 15/91 (16%)
Query: 1842 NSGKTALHWAAAVNNIDAVNILLSHGVNP---------------REGSYGACKALLDNFA 1886
S + A + + +L+ G + LL
Sbjct: 5 VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGV 64
Query: 1887 NREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
D P +A+ +IV+ L
Sbjct: 65 PVNDKDDAGWSPLHIAASAGXDEIVKALLVK 95
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat,
alternative splicing, ANK repeat, chromatin regulator,
nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP:
k.37.1.1 PDB: 3b95_A*
Length = 237
Score = 77.5 bits (192), Expect = 1e-15
Identities = 23/108 (21%), Positives = 36/108 (33%), Gaps = 15/108 (13%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
D L++ +DIN+ DN LHWAA +D ILL+ +
Sbjct: 125 DLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIA 184
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
RE Y L ++ + + P AS + +
Sbjct: 185 ARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKA 232
Score = 72.4 bits (179), Expect = 7e-14
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 16/109 (14%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
D L+ A A+I+ +T L AA N+++AV L+ G
Sbjct: 25 DICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLA 84
Query: 1871 -REGSYGACKALLDNFA-NREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
++G Y + LL N + D P A+E H D+V+LL
Sbjct: 85 AKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK 133
Score = 70.5 bits (174), Expect = 3e-13
Identities = 28/128 (21%), Positives = 44/128 (34%), Gaps = 21/128 (16%)
Query: 1811 AKGYEGRDCLI-----NTDDCASYLINADA-DINVPDNSGKTALHWAAAVNNIDAVNILL 1864
K EG CL + YL++ D+N D+ G T + WA ++D V +LL
Sbjct: 72 PKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLL 131
Query: 1865 SHGVNP---------------REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHD 1909
S G + G + LL + + P +A+ +D
Sbjct: 132 SKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYD 191
Query: 1910 IVRLLDEH 1917
V L
Sbjct: 192 CVVLFLSR 199
Score = 65.1 bits (160), Expect = 2e-11
Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 15/98 (15%)
Query: 1835 ADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP---------------REGSYGACK 1879
+ + + ++ LH AA ++D ++L+ G N A K
Sbjct: 2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVK 61
Query: 1880 ALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
L+ A + D +A+++ H+++V+ L +
Sbjct: 62 YLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSN 99
Score = 62.4 bits (153), Expect = 1e-10
Identities = 8/45 (17%), Positives = 21/45 (46%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVN 1869
DC ++ D+D+ + + G+T L A+ + + + + +
Sbjct: 191 DCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQD 235
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats,
methyllyine binding, huntingti interacting protein 14,
acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo
sapiens}
Length = 240
Score = 77.5 bits (192), Expect = 1e-15
Identities = 27/109 (24%), Positives = 38/109 (34%), Gaps = 16/109 (14%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
+ L+ A D+ PD T LHWAA N ID V +S G
Sbjct: 23 ERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHW 82
Query: 1871 --REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
R+G L+ A+ + D +A++ H IV L
Sbjct: 83 ATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAK 131
Score = 73.6 bits (182), Expect = 3e-14
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 19/97 (19%)
Query: 1822 NTDDCASYLINADADINVPDNS-GKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKA 1880
++ D L+ + +N+ D TALHWA N +++LL G
Sbjct: 154 HSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAG------------- 200
Query: 1881 LLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
AN + + D+A +R + ++ L E
Sbjct: 201 -----ANVDAQNIKGESALDLAKQRKNVWMINHLQEA 232
Score = 72.1 bits (178), Expect = 8e-14
Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 17/110 (15%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-REGSYG------A 1877
L+ AD ++ D G + +H AA + V L++ G + G A
Sbjct: 90 SMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWA 149
Query: 1878 C---------KALLDNFANREITDHMDRL-PRDVASERLHHDIVRLLDEH 1917
+ LL + + D + A + ++ LL E
Sbjct: 150 AYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEA 199
Score = 66.3 bits (163), Expect = 7e-12
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVN 1869
S L+ A A+++ + G++AL A N+ +N L
Sbjct: 191 TVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235
Score = 56.7 bits (138), Expect = 1e-08
Identities = 11/97 (11%), Positives = 26/97 (26%), Gaps = 16/97 (16%)
Query: 1837 INVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP---------------REGSYGACKAL 1881
+ D+ + A + L+ G + K
Sbjct: 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYY 61
Query: 1882 LDNFANREITDH-MDRLPRDVASERLHHDIVRLLDEH 1917
+ A + ++ P A+ + H +V L ++
Sbjct: 62 ISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKY 98
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural
genomics of pathogenic protozoa consortium, SGPP, ANK
repeat; 2.90A {Leishmania major}
Length = 364
Score = 78.8 bits (195), Expect = 3e-15
Identities = 11/121 (9%), Positives = 25/121 (20%), Gaps = 28/121 (23%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
D A + D+N+ DN L+ + + LL
Sbjct: 225 DVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVL 284
Query: 1871 --------------REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDE 1916
+ L + + + ++ + R+
Sbjct: 285 PDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLA 344
Query: 1917 H 1917
Sbjct: 345 P 345
Score = 72.2 bits (178), Expect = 4e-13
Identities = 18/102 (17%), Positives = 28/102 (27%), Gaps = 19/102 (18%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------R 1871
D LI + + G TALH A +D L S G
Sbjct: 34 DEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVM 93
Query: 1872 EGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRL 1913
AL++ R P + +E ++ +
Sbjct: 94 ANKTDLVVALVEGAKERGQM------PESLLNECDEREVNEI 129
Score = 70.7 bits (174), Expect = 1e-12
Identities = 11/113 (9%), Positives = 33/113 (29%), Gaps = 20/113 (17%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILL-----SHGVNP--------- 1870
+ L+ A D + +T L A N +A+++++ +
Sbjct: 154 EMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNS 213
Query: 1871 ------REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
++ + + D+ +P ++ + + L +
Sbjct: 214 HLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQK 266
Score = 67.2 bits (165), Expect = 1e-11
Identities = 6/62 (9%), Positives = 15/62 (24%), Gaps = 2/62 (3%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDN 1884
+ L ++ N+G + L+ R S ++
Sbjct: 304 EVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSS--A 361
Query: 1885 FA 1886
+
Sbjct: 362 VS 363
Score = 66.0 bits (162), Expect = 4e-11
Identities = 19/108 (17%), Positives = 28/108 (25%), Gaps = 27/108 (25%)
Query: 1830 LINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP---------------REGS 1874
+ D+ +H AA D V L+ GV+P + G
Sbjct: 6 TDFPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGC 65
Query: 1875 YGACKALLDNFANREITD-----HMDRLPRDVASERLHHDIVRLLDEH 1917
K L + H +A D+V L E
Sbjct: 66 VDTAKYLASVGEVHSLWHGQKPIH-------LAVMANKTDLVVALVEG 106
Score = 61.0 bits (149), Expect = 2e-09
Identities = 16/107 (14%), Positives = 31/107 (28%), Gaps = 22/107 (20%)
Query: 1833 ADADINVPDNSGKTALHWAAAVNN--IDAVNILLSHGVNP---------------REGSY 1875
+ +V G+TALHW + ++ + IL+ G +P +
Sbjct: 127 NEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNR 186
Query: 1876 GACKALLDNF-----ANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
A ++D + + A D+ E
Sbjct: 187 EALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEM 233
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit);
transcription factor, IKB/NFKB complex; 2.30A {Homo
sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Length = 236
Score = 76.4 bits (189), Expect = 3e-15
Identities = 25/113 (22%), Positives = 39/113 (34%), Gaps = 24/113 (21%)
Query: 1811 AKGYEGRDCLI-----NTDDCASYLINADADINVPDN-SGKTALHWAAAVNNIDAVNILL 1864
A Y G CL L++ AD+N + +G+TALH A + N D V++LL
Sbjct: 112 ATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLL 171
Query: 1865 SHGVNPREGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
G + +Y + R I + L +
Sbjct: 172 KCGADVNRVTYQGYSPY-----------Q-------LTWGRPSTRIQQQLGQL 206
Score = 73.4 bits (181), Expect = 3e-14
Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 21/116 (18%)
Query: 1823 TDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP------------ 1870
T + + A +N +N +T LH A N + LL G +P
Sbjct: 24 TMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLH 83
Query: 1871 ---REGSYGACKALLDNFANREITDHMDRLPRD------VASERLHHDIVRLLDEH 1917
+G + L + + + + +AS + IV LL
Sbjct: 84 LACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL 139
Score = 71.4 bits (176), Expect = 1e-13
Identities = 23/115 (20%), Positives = 39/115 (33%), Gaps = 22/115 (19%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
+ A L+ A D + D G T LH A + +V +L P
Sbjct: 59 EIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGH 118
Query: 1871 -------REGSYGACKALLDNFANREITDHMD-RLPRDVASERLHHDIVRLLDEH 1917
G G + L+ A+ + + R +A + + D+V LL +
Sbjct: 119 TCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKC 173
Score = 63.7 bits (156), Expect = 6e-11
Identities = 8/48 (16%), Positives = 14/48 (29%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE 1872
D S L+ AD+N G + + L + +
Sbjct: 165 DLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQ 212
Score = 48.7 bits (117), Expect = 5e-06
Identities = 14/96 (14%), Positives = 26/96 (27%), Gaps = 19/96 (19%)
Query: 1841 DNSGKTALHWAAAVNN----IDAVNILLSHGVNP---------------REGSYGACKAL 1881
G + LH A ++ + + +AL
Sbjct: 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64
Query: 1882 LDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
L + E+ D P +A E+ V +L +
Sbjct: 65 LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQS 100
Score = 39.5 bits (93), Expect = 0.006
Identities = 1/36 (2%), Positives = 5/36 (13%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAV 1860
L + + + +
Sbjct: 198 RIQQQLGQLTLENLQMLPESEDEESYDTESEFTEFT 233
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat
Pro ribosome display, apoptosis; 1.80A {Synthetic source}
PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D*
1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A
2xeh_A 3q9n_C* 3q9u_C*
Length = 169
Score = 74.3 bits (184), Expect = 4e-15
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 15/111 (13%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP----------- 1870
DD L+ AD+N D SG T LH AA +++ V +LL +G +
Sbjct: 25 GRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPL 84
Query: 1871 ----REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
G + LL N A+ D P +A+ H +IV +L ++
Sbjct: 85 RLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKN 135
Score = 70.9 bits (175), Expect = 4e-14
Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 18/93 (19%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDN 1884
+ L+ AD+N D G T LH AA +++ V +LL +G
Sbjct: 94 EIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNG----------------- 136
Query: 1885 FANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
A+ D + D++ + + D+ +L +
Sbjct: 137 -ADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168
Score = 58.1 bits (142), Expect = 1e-09
Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 22/106 (20%)
Query: 1827 ASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP---------------R 1871
+ + + +D+ L AA D V IL+++G +
Sbjct: 4 SHHHHHHGSDLG-------KKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAF 56
Query: 1872 EGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
G + LL N A+ DH P +A+ H +IV +L ++
Sbjct: 57 NGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKN 102
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate
recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo
sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A
3twq_A 3twu_A 2y0i_S*
Length = 165
Score = 73.6 bits (182), Expect = 5e-15
Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 16/104 (15%)
Query: 1829 YLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP---------------REG 1873
YL+ AD++ D G LH A + + + +L+ HG +G
Sbjct: 60 YLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKG 119
Query: 1874 SYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
Y CK LL + A+ + P D+ + DI LL
Sbjct: 120 KYEICKLLLQHGADPTKKNRDGNTPLDLVKDG-DTDIQDLLRGD 162
Score = 64.7 bits (159), Expect = 7e-12
Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 16/112 (14%)
Query: 1822 NTDDCASYLINA-DADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP---------- 1870
+ L + + T LH+AA N + V LL HG +
Sbjct: 19 GDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVP 78
Query: 1871 -----REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
G Y + L+ + A + D P A+ + ++I +LL +H
Sbjct: 79 LHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQH 130
Score = 58.2 bits (142), Expect = 1e-09
Identities = 8/43 (18%), Positives = 14/43 (32%), Gaps = 1/43 (2%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHG 1867
+ L+ AD + G T L + D ++L
Sbjct: 122 EICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDA 163
Score = 55.5 bits (135), Expect = 1e-08
Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 19/99 (19%)
Query: 1835 ADINVPDNSGKTALHWAAAVNNIDAVNILLS-HGVNPRE---------------GSYGAC 1878
A N + L AA +++ V L + VN R+
Sbjct: 2 AMGN---SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVV 58
Query: 1879 KALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+ LL + A+ D +P A H+++ LL +H
Sbjct: 59 EYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKH 97
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription
factors, ikappab proteins; 1.86A {Homo sapiens} SCOP:
d.211.1.1 PDB: 1k1b_A
Length = 241
Score = 75.6 bits (187), Expect = 6e-15
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 16/109 (14%)
Query: 1825 DCASYLINADADINVPD-NSGKTALHWAAAVNNIDAVNILLSHGVNP------------- 1870
+ L+ ADI+ D SG++ L A N++ V +LL HG N
Sbjct: 130 ETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHS 189
Query: 1871 --REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
G + L+ + A+ + + + P VA R DI+R
Sbjct: 190 ASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATR 238
Score = 69.4 bits (171), Expect = 8e-13
Identities = 22/116 (18%), Positives = 33/116 (28%), Gaps = 20/116 (17%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP----------- 1870
L+ A A D G+TA H A + + LL
Sbjct: 57 TLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDG 116
Query: 1871 --------REGSYGACKALLDNFANREITDHMDRL-PRDVASERLHHDIVRLLDEH 1917
+ LL+ A+ + D P A E +V+LL +H
Sbjct: 117 LTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQH 172
Score = 66.7 bits (164), Expect = 6e-12
Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 19/109 (17%)
Query: 1828 SYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP---------------RE 1872
+ ++++ +N +T LH A V +L++ G +P
Sbjct: 30 NLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEH 89
Query: 1873 GSYGACKALLDNFA----NREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
S +ALLD+ A + E ++ VA + V+LL E
Sbjct: 90 RSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER 138
Score = 65.6 bits (161), Expect = 1e-11
Identities = 8/45 (17%), Positives = 17/45 (37%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVN 1869
L+ + AD ++ + T L A + ID + + +
Sbjct: 197 PLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPAS 241
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping,
inhibition, prote binding, actin capping, actin-binding,
cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A
2kxp_C 2myo_A
Length = 123
Score = 72.0 bits (178), Expect = 7e-15
Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 15/103 (14%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
D + D+N G+ LH+AA ++ + LL G +
Sbjct: 21 DEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSA 80
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVR 1912
EG K LL A++ + + + +++
Sbjct: 81 VYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123
Score = 54.7 bits (133), Expect = 7e-09
Identities = 16/92 (17%), Positives = 25/92 (27%), Gaps = 15/92 (16%)
Query: 1841 DNSGKTALHWAAAVNNIDAVNILLSHGVNP---------------REGSYGACKALLDNF 1885
+ WA ++D V ++ G + G + LL
Sbjct: 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG 63
Query: 1886 ANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
A+ D P A H V+LL
Sbjct: 64 ADINAPDKHHITPLLSAVYEGHVSCVKLLLSK 95
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling,
POL ribosylation, transferase-signaling protein complex;
2.00A {Mus musculus}
Length = 351
Score = 77.5 bits (192), Expect = 7e-15
Identities = 25/111 (22%), Positives = 39/111 (35%), Gaps = 15/111 (13%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP----------- 1870
N + + L + + + D T LH AA N + V +LL HG +
Sbjct: 36 NEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPL 95
Query: 1871 ----REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
G Y + LL + A D P A+ + ++ LL H
Sbjct: 96 HNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSH 146
Score = 75.6 bits (187), Expect = 3e-14
Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 24/110 (21%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP----------- 1870
A L+ A++N + T LH AA + D + +L HG
Sbjct: 225 KRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTAL 284
Query: 1871 ----REGSYGACKALLDNFANREITDHMDRLPRDVASERLH--HDIVRLL 1914
G C+ LL ++ I ++ V+ +
Sbjct: 285 HRAALAGHLQTCRLLLSYGSDPSIISLQGFTA-------AQMGNEAVQQI 327
Score = 74.5 bits (184), Expect = 7e-14
Identities = 22/126 (17%), Positives = 42/126 (33%), Gaps = 25/126 (19%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDN 1884
+ L+ A +N D T LH AA+ N ++ ++LLSHG +P
Sbjct: 105 EVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADP-------------- 150
Query: 1885 FANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQMVSVISNGKVTK-----GGGN 1939
+ + + D+A + + + S + ++ K N
Sbjct: 151 ----TLVNCHGKSAVDMAPTPELRERLTYEFKG--HSLLQAAREADLAKVKKTLALEIIN 204
Query: 1940 NKKINK 1945
K+
Sbjct: 205 FKQPQS 210
Score = 64.8 bits (159), Expect = 9e-11
Identities = 19/107 (17%), Positives = 29/107 (27%), Gaps = 18/107 (16%)
Query: 1829 YLINADADINVPDNSGKTALHWAAA---VNNIDAVNILLSHGVNP--------------- 1870
+ + S +TALH A A +LL G N
Sbjct: 196 KTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAA 255
Query: 1871 REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+ L + A D + + A+ H RLL +
Sbjct: 256 ERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSY 302
Score = 62.9 bits (154), Expect = 3e-10
Identities = 20/104 (19%), Positives = 33/104 (31%), Gaps = 16/104 (15%)
Query: 1830 LINADADINVPDNSGKTALHWAAAVNNIDA-VNILLSHGVNP---------------REG 1873
L + A + K L AA N + + +L VN
Sbjct: 10 LADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYN 69
Query: 1874 SYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+ LL + A+ D +P A H+++ LL +H
Sbjct: 70 RVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKH 113
Score = 56.7 bits (138), Expect = 3e-08
Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 5/48 (10%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE 1872
L++ +D ++ G TA +AV +LS R
Sbjct: 294 QTCRLLLSYGSDPSIISLQGFTAAQMGN-----EAVQQILSESTPMRT 336
Score = 50.6 bits (122), Expect = 3e-06
Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 41/133 (30%)
Query: 1825 DCASYLINADADINVPDNSGKTA----------------------LHWAAAVNNIDAVNI 1862
+ S L++ AD + + GK+A L AA ++ V
Sbjct: 138 EVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQ-AAREADLAKVKK 196
Query: 1863 LL-SHGVNPREGSYG-----------------ACKALLDNFANREITDHMDRLPRDVASE 1904
L +N ++ + LL AN + P VA+E
Sbjct: 197 TLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAE 256
Query: 1905 RLHHDIVRLLDEH 1917
R H+D++ +L +H
Sbjct: 257 RAHNDVMEVLHKH 269
Score = 36.3 bits (85), Expect = 0.089
Identities = 4/46 (8%), Positives = 14/46 (30%), Gaps = 2/46 (4%)
Query: 1811 AKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAVNN 1856
+G ++ +++ + D + L A+ +
Sbjct: 308 IISLQGFTAAQMGNEAVQQILSESTPMRTSDVDYR--LLEASKAGD 351
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle
inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo
sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A
1mx6_A
Length = 162
Score = 73.2 bits (181), Expect = 7e-15
Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 16/111 (14%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP----------- 1870
+ + L+ + ++N + G+TAL N + LL G NP
Sbjct: 16 GDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVI 74
Query: 1871 ----REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
R G + LL+ A+ I D+ LP +A++ H +V L +H
Sbjct: 75 HDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH 125
Score = 73.2 bits (181), Expect = 7e-15
Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 16/109 (14%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
+ A L+ A+ ++ D +G +H AA +D + LL +
Sbjct: 51 EIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110
Query: 1871 -REGSYGACKALLDNFA-NREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+EG + L+ + A N +H D+A +++V L+ +
Sbjct: 111 AKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 159
Score = 56.6 bits (138), Expect = 4e-09
Identities = 8/44 (18%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 1825 DCASYLINADA-DINVPDNSGKTALHWAAAVNNIDAVNILLSHG 1867
+L+ A ++ ++ G TA A + V+++ ++G
Sbjct: 117 RVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160
Score = 55.1 bits (134), Expect = 1e-08
Identities = 18/91 (19%), Positives = 31/91 (34%), Gaps = 14/91 (15%)
Query: 1841 DNSGKTALHWAAAVNNIDAVNILLSHGVNP--------------REGSYGACKALLDNFA 1886
L AAA +++ + LL + VN + G+ + LL A
Sbjct: 2 AEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGA 61
Query: 1887 NREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
N ++ D A+ D ++ L E
Sbjct: 62 NPDLKDRTGFAVIHDAARAGFLDTLQTLLEF 92
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein
complex, transcription factors, nuclear localization, DNA
binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1
PDB: 1k3z_D
Length = 282
Score = 74.9 bits (185), Expect = 2e-14
Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 16/112 (14%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHG--VNPREGSYG--- 1876
++ + + + G T LH A + + V +L G +N E + G
Sbjct: 136 PENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP 195
Query: 1877 ---AC--------KALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
A + LL A+ + R P A R + + RLL H
Sbjct: 196 LHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAH 247
Score = 71.0 bits (175), Expect = 4e-13
Identities = 17/93 (18%), Positives = 23/93 (24%), Gaps = 18/93 (19%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDN 1884
L+ A AD G+T L A N +L +HG
Sbjct: 206 SVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHG----------------- 248
Query: 1885 FANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
A P + D DE+
Sbjct: 249 -APEPEDGGDKLSPCSSSGSDSDSDNRDEGDEY 280
Score = 71.0 bits (175), Expect = 4e-13
Identities = 16/100 (16%), Positives = 29/100 (29%), Gaps = 18/100 (18%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDN 1884
L A A + V + G TALH A V +LL + +
Sbjct: 59 STVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPR-----------D 107
Query: 1885 FANREITDHMDRLPRDV-------ASERLHHDIVRLLDEH 1917
++ +T D P + ++ ++
Sbjct: 108 ASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDW 147
Score = 61.4 bits (150), Expect = 7e-10
Identities = 14/99 (14%), Positives = 23/99 (23%), Gaps = 18/99 (18%)
Query: 1837 INVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP------------------REGSYGAC 1878
G TALH A + ++ LL G
Sbjct: 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTV 61
Query: 1879 KALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+ L A + + +A H +L +
Sbjct: 62 EKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQP 100
Score = 54.9 bits (133), Expect = 9e-08
Identities = 4/46 (8%), Positives = 11/46 (23%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHG 1867
A L A + + + ++ D + +
Sbjct: 236 PNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNRDEGDEYD 281
Score = 45.2 bits (108), Expect = 1e-04
Identities = 12/123 (9%), Positives = 25/123 (20%), Gaps = 30/123 (24%)
Query: 1825 DCASYLINADADINVPDN-------------SGKTALHWAAAVNN-IDAVNILLSHGVNP 1870
CA L+ + + + N + +
Sbjct: 92 TCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQL 151
Query: 1871 ---------------REGSYGACKALLDNFANREITDHMDRL-PRDVASERLHHDIVRLL 1914
+ L D A+ + P +A E ++ LL
Sbjct: 152 EAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELL 211
Query: 1915 DEH 1917
+
Sbjct: 212 LKA 214
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A
{Enterococcus faecalis}
Length = 201
Score = 72.9 bits (180), Expect = 2e-14
Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 21/127 (16%)
Query: 1812 KGYEGRDCLI-----NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSH 1866
K YE L +T L + ++ D G T L+ A N+I+ L+
Sbjct: 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDR 61
Query: 1867 GVNP---------------REGSYGACKALLDNFA-NREITDHMDRLPRDVASERLHHDI 1910
G + +G +L + + + A+E+ H D
Sbjct: 62 GADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDN 121
Query: 1911 VRLLDEH 1917
V+LL E
Sbjct: 122 VKLLLED 128
Score = 67.9 bits (167), Expect = 1e-12
Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 22/115 (19%)
Query: 1825 DCASYLI-NADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGV--------------- 1868
+ +Y++ +A D+N + G AL AA +ID V +LL G
Sbjct: 86 EILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALI 145
Query: 1869 ------NPREGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+ K L++N A++ I D+ R D A+++ + +I ++L ++
Sbjct: 146 EAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200
Score = 67.5 bits (166), Expect = 2e-12
Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 22/115 (19%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHG---VNP----------- 1870
+ A LI+ ADIN+ ++ + +A A + + +L H +N
Sbjct: 53 EIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIP 112
Query: 1871 --REGSYGACKALLDN-FANREITDHMDRLP-----RDVASERLHHDIVRLLDEH 1917
+G K LL++ + + + +L+ DIV+LL E+
Sbjct: 113 AAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMEN 167
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo
sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Length = 91
Score = 69.0 bits (169), Expect = 3e-14
Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 11/98 (11%)
Query: 1110 TFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDC 1169
+++ +C T + + P L C C G H + + C
Sbjct: 1 SYQVICRDEKTQMIYQ--QHQSWLRPVLRSN------RVEYCWCNSGRAQCHS-VPVKSC 51
Query: 1170 VSSPCHNGGICKDSIA--GYTCECLAGFTGMSCETNIN 1205
C NGG C+ ++ + C+C GF G SCE +
Sbjct: 52 SEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTR 89
Score = 68.3 bits (167), Expect = 6e-14
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Query: 1104 CLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLI--NTFKCACPIGFTGSH 1161
L C C G + C+ C NGG C + + F C CP GF G
Sbjct: 25 VLRSNRVEYCWCNSGRAQC-HSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKS 83
Query: 1162 CQINI 1166
C+I+
Sbjct: 84 CEIDT 88
Score = 66.7 bits (163), Expect = 2e-13
Identities = 25/98 (25%), Positives = 34/98 (34%), Gaps = 11/98 (11%)
Query: 1300 YSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECA 1359
Y C T + + ++ P C C G V C+
Sbjct: 2 YQVICRDEKTQMIYQ--QHQSWLRPVLRSNRV------EYCWCNSGR-AQCHSVPVKSCS 52
Query: 1360 SDPCLNGGTCEDGL--NQFICHCKPGYGGKRCEFDIDE 1395
C NGGTC+ L + F+C C G+ GK CE D
Sbjct: 53 EPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA 90
Score = 66.0 bits (161), Expect = 4e-13
Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 10/97 (10%)
Query: 1187 YTCECLAGFTGMSCETNINDCASNPCHRGECIDGENSFTCACHPGFTGALCNTQLDECAS 1246
Y C T M + + P R C C+ G + + C+
Sbjct: 2 YQVICRDEKTQMIYQ--QHQSWLRPVLRSN-----RVEYCWCNSGRAQ-CHSVPVKSCSE 53
Query: 1247 NPCQFGGQCEDLI--NGYQCRCKPGTSGTNCEININE 1281
C GG C+ + + + C+C G +G +CEI+
Sbjct: 54 PRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA 90
Score = 64.0 bits (156), Expect = 2e-12
Identities = 21/98 (21%), Positives = 33/98 (33%), Gaps = 11/98 (11%)
Query: 1262 YQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECA 1321
YQ C+ + + + + + P + C C G H + C+
Sbjct: 2 YQVICRDEKTQMIYQQH--QSWLRPVLRSNRV------EYCWCNSGRAQCHS-VPVKSCS 52
Query: 1322 SNPCANGGVCVDLI--DGFKCECPRGYYDARCLSDVDE 1357
C NGG C + F C+CP G+ C D
Sbjct: 53 EPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA 90
Score = 62.1 bits (151), Expect = 8e-12
Identities = 20/96 (20%), Positives = 31/96 (32%), Gaps = 11/96 (11%)
Query: 1338 FKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECG 1397
++ C + P L E C C G + C
Sbjct: 2 YQVICRDEKTQMIY--QQHQSWLRPVLRSNRVE------YCWCNSGRAQC-HSVPVKSCS 52
Query: 1398 SNPCQHGGICTDHL--NGYTCECQIGYTGINCEINI 1431
C +GG C L + + C+C G+ G +CEI+
Sbjct: 53 EPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT 88
Score = 61.3 bits (149), Expect = 1e-11
Identities = 18/68 (26%), Positives = 21/68 (30%), Gaps = 3/68 (4%)
Query: 1065 TCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDD--PGTFRCVCMPGFTGT 1122
+ + C C G V C C N G+C F C C GF G
Sbjct: 24 PVLRSNRVEYCWCNSGRAQC-HSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGK 82
Query: 1123 QCETDIDE 1130
CE D
Sbjct: 83 SCEIDTRA 90
Score = 58.6 bits (142), Expect = 1e-10
Identities = 16/63 (25%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
Query: 161 TCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQ 220
+ + C C G V C C N G+C VC C G+ G+
Sbjct: 24 PVLRSNRVEYCWCNSGRAQC-HSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGK 82
Query: 221 NCE 223
+CE
Sbjct: 83 SCE 85
Score = 57.5 bits (139), Expect = 4e-10
Identities = 19/97 (19%), Positives = 26/97 (26%), Gaps = 12/97 (12%)
Query: 211 CMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPG 270
+C T + P C C SG + C
Sbjct: 4 VICRDEKTQMIYQQH--QSWLRPVLRSNRV-------EYCWCNSGRAQ-CHSVPVKSCSE 53
Query: 271 NLCQNGATCMDGI--NKYSCLCLATYTGDLCEQDVDE 305
C NG TC + + + C C + G CE D
Sbjct: 54 PRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA 90
Score = 56.0 bits (135), Expect = 1e-09
Identities = 25/127 (19%), Positives = 29/127 (22%), Gaps = 37/127 (29%)
Query: 966 SYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDEC 1025
SY C P C C G + H V + C
Sbjct: 1 SYQVICRDEKTQMIY--QQHQSWLRPVLRSN------RVEYCWCNSGRAQCHS-VPVKSC 51
Query: 1026 SSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPR 1085
S C NG TC Q F C C +GF G
Sbjct: 52 SEPRCFNGGTCQQ----------------------------ALYFSDFVCQCPEGFAGKS 83
Query: 1086 CETNVNE 1092
CE +
Sbjct: 84 CEIDTRA 90
Score = 54.8 bits (132), Expect = 3e-09
Identities = 15/59 (25%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Query: 59 YTCTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDT--YECDCAPGFVGQTCSEDIIE 115
C C G C+ C NG C + C C GF G++C D
Sbjct: 32 EYCWCNSGRAQCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA 90
Score = 54.8 bits (132), Expect = 4e-09
Identities = 19/96 (19%), Positives = 30/96 (31%), Gaps = 13/96 (13%)
Query: 612 HTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNE 671
+ IC D + + P C C G H
Sbjct: 2 YQVICRDEKTQMIYQQH--QSWLRPVLRSN-------RVEYCWCNSGRAQCHSV--PVKS 50
Query: 672 CYSNPCQHAGTCEDRIA--DYACYCLPMWNGKNCDL 705
C C + GTC+ + D+ C C + GK+C++
Sbjct: 51 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEI 86
Score = 53.3 bits (128), Expect = 1e-08
Identities = 18/88 (20%), Positives = 25/88 (28%), Gaps = 7/88 (7%)
Query: 860 QQQQPINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARC 919
+ Q +P C C + C RC +G C
Sbjct: 10 KTQMIYQQHQSWLRPVLRSNRV------EYCWCNSGRAQ-CHSVPVKSCSEPRCFNGGTC 62
Query: 920 TPSANFQDFACHCGVGWTGRYCNEDVDE 947
+ F DF C C G+ G+ C D
Sbjct: 63 QQALYFSDFVCQCPEGFAGKSCEIDTRA 90
Score = 53.3 bits (128), Expect = 1e-08
Identities = 17/61 (27%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Query: 610 GGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEG-GGYRCDCPPGATGTHCELDS 668
C C + C C NGG C+ + C CP G G CE+D+
Sbjct: 30 RVEYCWCNSGRAQ-CHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT 88
Query: 669 R 669
R
Sbjct: 89 R 89
Score = 53.3 bits (128), Expect = 1e-08
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 13/101 (12%)
Query: 286 YSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDD 345
Y +C T + +Q + +RP + N C C +G S+ +
Sbjct: 2 YQVICRDEKTQMIYQQH--QSWLRPVLRSNR--------VEYCWCNSGRAQC-HSVPVKS 50
Query: 346 CAGAACFNGATCIDRV--GSFYCQCTPGKTGLLCHLEDACT 384
C+ CFNG TC + F CQC G G C ++ T
Sbjct: 51 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRAT 91
Score = 51.3 bits (123), Expect = 6e-08
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 5 GTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCT-LKSLDRYTCTC 63
+R + +C C G A +PV SC C NGGTC + C C
Sbjct: 18 HQSWLRPVLRSNRVEYCWCNSGR-AQCHSVPV-KSCSEPRCFNGGTCQQALYFSDFVCQC 75
Query: 64 APGFTGSQCEL 74
GF G CE+
Sbjct: 76 PEGFAGKSCEI 86
Score = 50.9 bits (122), Expect = 6e-08
Identities = 20/108 (18%), Positives = 31/108 (28%), Gaps = 26/108 (24%)
Query: 363 SFYCQCTPGKTGLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDIN 422
S+ C KT ++ P N C C SG
Sbjct: 1 SYQVICRDEKTQMIYQQHQ-SWLRPVLRS---------NRVEYCWCNSGRAQ-------- 42
Query: 423 ECEQGINCEINIDDCAFKPCRHGGTCIDLV--NAYKCVCQVPYTGHDC 468
+ + C+ C +GGTC + + + C C + G C
Sbjct: 43 ------CHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSC 84
Score = 50.2 bits (120), Expect = 1e-07
Identities = 12/68 (17%), Positives = 21/68 (30%), Gaps = 9/68 (13%)
Query: 1391 FDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLV- 1449
+ + P C C G + + C+ C +GGTC +
Sbjct: 15 YQQHQSWLRPVLRSN------RVEYCWCNSGRAQ-CHSVPVKSCSEPRCFNGGTCQQALY 67
Query: 1450 -NAYKCVC 1456
+ + C C
Sbjct: 68 FSDFVCQC 75
Score = 49.8 bits (119), Expect = 2e-07
Identities = 22/100 (22%), Positives = 34/100 (34%), Gaps = 14/100 (14%)
Query: 887 AYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQDFACHCGVGWTGRYCNEDVD 946
+Y+ +C+ T Q R C C G + V
Sbjct: 1 SYQVICRDEKTQMIYQQ--HQSWLRPVLRSNRV--------EYCWCNSGRAQC-HSVPVK 49
Query: 947 ECQLSSPCRNGATCHNT--NGSYLCECAKGYEGRDCLINT 984
C C NG TC ++C+C +G+ G+ C I+T
Sbjct: 50 SCS-EPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT 88
Score = 47.9 bits (114), Expect = 9e-07
Identities = 23/132 (17%), Positives = 30/132 (22%), Gaps = 45/132 (34%)
Query: 59 YTCTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVD 118
Y C T + R+ V C C G S + C +
Sbjct: 2 YQVICRDEKTQMIYQQHQSWLRPVLRSNRV-------EYCWCNSGRAQ-CHSVPVKSCSE 53
Query: 119 DPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNT--PGSFACNCTQG 176
C +G GTC F C C +G
Sbjct: 54 PRCFNG-----------------------------------GTCQQALYFSDFVCQCPEG 78
Query: 177 FTGPRCETNVNE 188
F G CE +
Sbjct: 79 FAGKSCEIDTRA 90
Score = 47.5 bits (113), Expect = 1e-06
Identities = 18/99 (18%), Positives = 30/99 (30%), Gaps = 13/99 (13%)
Query: 247 NYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDEC 306
+Y+ C+ +++ C C + V C
Sbjct: 1 SYQVICRDEKTQMIYQQH--QSWLRPVLRSNRV------EYCWCNSGRAQC-HSVPVKSC 51
Query: 307 SIRPSVCHNGATCTNSV--GGFSCICVNGWTGPDCSLNI 343
S C NG TC ++ F C C G+ G C ++
Sbjct: 52 SEPR--CFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT 88
Score = 47.5 bits (113), Expect = 1e-06
Identities = 16/98 (16%), Positives = 25/98 (25%), Gaps = 9/98 (9%)
Query: 326 FSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTS 385
+ IC + T YC C G+ +C+
Sbjct: 2 YQVICRDEKTQ--MIYQQHQSWLRPVLRSN------RVEYCWCNSGRAQCHSVPVKSCSE 53
Query: 386 NPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINE 423
C C + + C C G+ G +C D
Sbjct: 54 PRCFNGGTC-QQALYFSDFVCQCPEGFAGKSCEIDTRA 90
Score = 46.3 bits (110), Expect = 3e-06
Identities = 17/66 (25%), Positives = 20/66 (30%), Gaps = 16/66 (24%)
Query: 1629 YTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDKV--GGFECRCPP 1686
C C G + V C C N GTC + F C+CP
Sbjct: 32 EYCWCNSGRAQ--------------CHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPE 77
Query: 1687 GFVGSR 1692
GF G
Sbjct: 78 GFAGKS 83
Score = 43.2 bits (102), Expect = 3e-05
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 517 CEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEV 559
+ C C + GT +++ C C G+ G+ CE+
Sbjct: 44 HSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEI 86
Score = 34.0 bits (78), Expect = 0.069
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPV 36
C NGGTC Q Y F C CP GF+ CEI
Sbjct: 56 CFNGGTC---QQALYFSDFVCQCPEGFAGKSCEIDT 88
Score = 29.8 bits (67), Expect = 2.4
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 600 WNGGVCT--ALDGGHTCICPDNYSGRNCE 626
+NGG C C CP+ ++G++CE
Sbjct: 57 FNGGTCQQALYFSDFVCQCPEGFAGKSCE 85
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Length = 285
Score = 74.1 bits (183), Expect = 4e-14
Identities = 14/109 (12%), Positives = 39/109 (35%), Gaps = 16/109 (14%)
Query: 1825 DCASYLINADADINVPDNSG-KTALHWAAAVNNIDAVNILLSHGVNPREGSYG------A 1877
+ + + +G KT+ + A +N++ V+ LS + + +
Sbjct: 109 QTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHIT 168
Query: 1878 C--------KALLDNFANREITDHMDRLPR-DVASERLHHDIVRLLDEH 1917
LLD + + + +P +A + ++++ L ++
Sbjct: 169 IKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKY 217
Score = 72.6 bits (179), Expect = 1e-13
Identities = 15/109 (13%), Positives = 32/109 (29%), Gaps = 17/109 (15%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
L+ + D + D+ G TAL++A N+ V + +
Sbjct: 76 KIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYH 135
Query: 1871 --REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
L + + + + H D++ LL ++
Sbjct: 136 AVMLNDVSIVSYFLSEIPSTF-DLAILLSCIHITIKNGHVDMMILLLDY 183
Score = 68.7 bits (169), Expect = 2e-12
Identities = 19/102 (18%), Positives = 32/102 (31%), Gaps = 14/102 (13%)
Query: 1829 YLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------REGSY 1875
++ D D G +A ++A A NN+ V LL+ G
Sbjct: 17 SFLS-SKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDT 75
Query: 1876 GACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
K LL + + D A + + V+L +
Sbjct: 76 KIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK 117
Score = 65.6 bits (161), Expect = 2e-11
Identities = 11/109 (10%), Positives = 27/109 (24%), Gaps = 24/109 (22%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
SY ++ + +H ++D + +LL + +
Sbjct: 143 SIVSYFLSEIPSTFD-LAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKL 201
Query: 1871 --REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+AL N + +I +++ E
Sbjct: 202 AIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEK 243
Score = 52.5 bits (127), Expect = 4e-07
Identities = 10/69 (14%), Positives = 23/69 (33%), Gaps = 7/69 (10%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDN 1884
+ L D +I +A +++ + +++ V + SY ++ N
Sbjct: 209 EMLQALFKYDINIY-------SANLENVLLDDAEIAKMIIEKHVEYKSDSYTKDLDIVKN 261
Query: 1885 FANREITDH 1893
EI
Sbjct: 262 NKLDEIISK 270
Score = 41.7 bits (99), Expect = 0.001
Identities = 5/45 (11%), Positives = 13/45 (28%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVN 1869
+ A +I + + + ++ I + N L
Sbjct: 235 EIAKMIIEKHVEYKSDSYTKDLDIVKNNKLDEIISKNKELRLMYV 279
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A
{Homo sapiens} SCOP: d.211.1.1
Length = 285
Score = 73.7 bits (182), Expect = 5e-14
Identities = 21/115 (18%), Positives = 37/115 (32%), Gaps = 25/115 (21%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
D L+ AD + +G T AA ++ + + LS G +
Sbjct: 53 DIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEA 112
Query: 1871 -REGSYGACKALLDNFANREITDHMDRLPRD----------VASERLHHDIVRLL 1914
G A K L AN + A+E+ H +++++L
Sbjct: 113 AVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKIL 167
Score = 70.2 bits (173), Expect = 7e-13
Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 21/124 (16%)
Query: 1815 EGRDCLI-----NTDDCASYLINADADINVPDNS-GKTALHWAAAVNNIDAVNILLSHGV 1868
E LI D L+ A++N + G T LH A ++ D V +LL HG
Sbjct: 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63
Query: 1869 NP---------------REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRL 1913
+P GS K L A+ D A+ ++
Sbjct: 64 DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123
Query: 1914 LDEH 1917
L +
Sbjct: 124 LYKR 127
Score = 67.9 bits (167), Expect = 4e-12
Identities = 20/91 (21%), Positives = 28/91 (30%), Gaps = 17/91 (18%)
Query: 1827 ASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDNFA 1886
L++ AD+NV GKT L A ++ V LL
Sbjct: 202 THLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ--------EH---------I 244
Query: 1887 NREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
TD + +A E I LL +
Sbjct: 245 EINDTDSDGKTALLLAVELKLKKIAELLCKR 275
Score = 60.6 bits (148), Expect = 1e-09
Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 30/123 (24%)
Query: 1825 DCASYLINADADINVPDN----------SGKTALHWAAAVNNIDAVNILLSH-GVNP--- 1870
+L A++N+ G TAL AA +++ + ILL G +
Sbjct: 119 KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNAC 178
Query: 1871 ------------REGSYGACKA----LLDNFANREITDHMDRLPRDVASERLHHDIVRLL 1914
+A LLD+ A+ + + P +A E+ H +V+ L
Sbjct: 179 DNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 238
Query: 1915 DEH 1917
E
Sbjct: 239 LEQ 241
Score = 59.8 bits (146), Expect = 2e-09
Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 1825 DCASYLI-NADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP 1870
L+ +IN D+ GKTAL A + +L G +
Sbjct: 233 GLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 279
Score = 51.3 bits (124), Expect = 1e-06
Identities = 14/93 (15%), Positives = 26/93 (27%), Gaps = 16/93 (17%)
Query: 1841 DNSGKTALHWAAAVNNIDAVNILLSHGVNP----------------REGSYGACKALLDN 1884
L A ++D V LL G N + + LL +
Sbjct: 2 AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61
Query: 1885 FANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
A+ + P +A+ +++L
Sbjct: 62 GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSK 94
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Length = 93
Score = 67.4 bits (166), Expect = 1e-13
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 18/93 (19%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDN 1884
+ L+ A AD+N D +G+T LH AA +++ V +LL G
Sbjct: 16 EVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG----------------- 58
Query: 1885 FANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
A+ D R P +A+ H ++V+LL E
Sbjct: 59 -ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 90
Score = 60.1 bits (147), Expect = 4e-11
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHG 1867
+ L+ A AD+N D +G+T LH AA +++ V +LL G
Sbjct: 49 EVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 91
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR
{Escherichia coli}
Length = 115
Score = 68.2 bits (168), Expect = 1e-13
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 18/93 (19%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDN 1884
+ L++ AD+N G T LH AA + + V +LL+ G
Sbjct: 23 EEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG----------------- 65
Query: 1885 FANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
A+ P +A + HH+IV+LLD
Sbjct: 66 -ADVNARSKDGNTPEHLAKKNGHHEIVKLLDAK 97
Score = 62.8 bits (154), Expect = 9e-12
Identities = 13/57 (22%), Positives = 23/57 (40%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKAL 1881
+ L+ AD+N G T H A + + V +L + G + S+G+
Sbjct: 56 EIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112
Score = 39.7 bits (94), Expect = 0.001
Identities = 5/25 (20%), Positives = 7/25 (28%)
Query: 1825 DCASYLINADADINVPDNSGKTALH 1849
+ L AD+N H
Sbjct: 89 EIVKLLDAKGADVNARSWGSSHHHH 113
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like
domain, structure and function, coagulation factor; 1.50A
{Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Length = 39
Score = 65.6 bits (161), Expect = 1e-13
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 1392 DIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEI 1429
D D+C SNPC +GG C D +N Y C C G+ G NCE+
Sbjct: 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39
Score = 65.2 bits (160), Expect = 2e-13
Identities = 22/38 (57%), Positives = 29/38 (76%)
Query: 1127 DIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQI 1164
D D+C SNPCLNGG C D IN+++C CP GF G +C++
Sbjct: 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39
Score = 64.4 bits (158), Expect = 3e-13
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 1277 ININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCE 1314
++ ++C SNPC NG C D IN Y C C G+ G +CE
Sbjct: 1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38
Score = 61.3 bits (150), Expect = 4e-12
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 982 INTDDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEV 1020
++ D C S PC NGG+C D++ Y C C GF GK+CE+
Sbjct: 1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39
Score = 61.0 bits (149), Expect = 5e-12
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 1354 DVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEF 1391
D D+C S+PCLNGG+C+D +N + C C G+ GK CE
Sbjct: 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39
Score = 59.8 bits (146), Expect = 1e-11
Identities = 20/38 (52%), Positives = 24/38 (63%)
Query: 1164 INIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCE 1201
++ D C S+PC NGG CKD I Y C C GF G +CE
Sbjct: 1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38
Score = 58.3 bits (142), Expect = 4e-11
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 1242 DECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEI 1277
D+C SNPC GG C+D IN Y+C C G G NCE+
Sbjct: 4 DQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39
Score = 55.2 bits (134), Expect = 5e-10
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 1316 NINECASNPCANGGVCVDLIDGFKCECPRGYYDARC 1351
+ ++C SNPC NGG C D I+ ++C CP G+ C
Sbjct: 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNC 37
Score = 54.4 bits (132), Expect = 1e-09
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 1089 NVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCE 1125
+ ++CES+PC N GSC DD ++ C C GF G CE
Sbjct: 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38
Score = 52.5 bits (127), Expect = 5e-09
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 432 INIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDC 468
++ D C PC +GG+C D +N+Y+C C + G +C
Sbjct: 1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNC 37
Score = 52.5 bits (127), Expect = 5e-09
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 865 INIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDC 901
++ D C PC +GG+C D +N+Y+C C + G +C
Sbjct: 1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNC 37
Score = 51.3 bits (124), Expect = 1e-08
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 264 NIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCE 300
+ D C N C NG +C D IN Y C C + G CE
Sbjct: 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38
Score = 50.9 bits (123), Expect = 2e-08
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 185 NVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCE 223
+ ++CES+PC N GSC DD ++ C C G+ G+NCE
Sbjct: 2 DGDQCESNPCLNGGSCKDDINSYECWCP--FGFEGKNCE 38
Score = 50.2 bits (121), Expect = 3e-08
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 520 DINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEV 559
D ++C SNPC + G+ C +N+Y C C G+ G++CE+
Sbjct: 2 DGDQCESNPCLNGGS--CKDDINSYECWCPFGFEGKNCEL 39
Score = 49.4 bits (119), Expect = 6e-08
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 670 NECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCDL 705
++C SNPC + G+C+D I Y C+C + GKNC+L
Sbjct: 4 DQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39
Score = 49.0 bits (118), Expect = 9e-08
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 1203 NINDCASNPC-HRGECIDGENSFTCACHPGFTGALC 1237
+ + C SNPC + G C D NS+ C C GF G C
Sbjct: 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNC 37
Score = 48.2 bits (116), Expect = 1e-07
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 944 DVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDC 980
D D+C+ S+PC NG +C + SY C C G+EG++C
Sbjct: 2 DGDQCE-SNPCLNGGSCKDDINSYECWCPFGFEGKNC 37
Score = 47.5 bits (114), Expect = 3e-07
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 631 DCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCEL 666
C+SNPC NGG C+ Y C CP G G +CEL
Sbjct: 5 QCESNPCLNGGSCKDDINS-YECWCPFGFEGKNCEL 39
Score = 46.3 bits (111), Expect = 8e-07
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 38 NSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCEL 74
+ C+S PC+NGG+C ++ Y C C GF G CEL
Sbjct: 4 DQCESNPCLNGGSCK-DDINSYECWCPFGFEGKNCEL 39
Score = 46.3 bits (111), Expect = 9e-07
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 76 DHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTC 109
D C S+PC NG C ++YEC C GF G+ C
Sbjct: 4 DQCESNPCLNGGSCKDDINSYECWCPFGFEGKNC 37
Score = 45.9 bits (110), Expect = 1e-06
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 302 DVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDC 339
D D+C P C NG +C + + + C C G+ G +C
Sbjct: 2 DGDQCESNP--CLNGGSCKDDINSYECWCPFGFEGKNC 37
Score = 45.5 bits (109), Expect = 2e-06
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 341 LNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHL 379
++ D C C NG +C D + S+ C C G G C L
Sbjct: 1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39
Score = 45.2 bits (108), Expect = 2e-06
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 1429 INIDDCAFKPCRHGGTCIDLVNAYKCVCA 1457
++ D C PC +GG+C D +N+Y+C C
Sbjct: 1 VDGDQCESNPCLNGGSCKDDINSYECWCP 29
Score = 44.4 bits (106), Expect = 3e-06
Identities = 20/68 (29%), Positives = 24/68 (35%), Gaps = 30/68 (44%)
Query: 1020 VDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQ 1079
VD D+C SNPC NG G+C + S+ C C
Sbjct: 1 VDGDQCESNPCLNG------------------------------GSCKDDINSYECWCPF 30
Query: 1080 GFTGPRCE 1087
GF G CE
Sbjct: 31 GFEGKNCE 38
Score = 44.0 bits (105), Expect = 5e-06
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 229 CDPSPCQNGGVCRELDNLNYECECQSGYRGKNCE 262
C+ +PC NGG C++ N +YEC C G+ GKNCE
Sbjct: 6 CESNPCLNGGSCKDDIN-SYECWCPFGFEGKNCE 38
Score = 43.6 bits (104), Expect = 6e-06
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 1657 INVPDCLPGACHNNGTCVDKVGGFECRCPPGFVGSR 1692
++ C C N G+C D + +EC CP GF G
Sbjct: 1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKN 36
Score = 40.2 bits (95), Expect = 1e-04
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 152 AGSPCEHDGTCVNTPGSFACNCTQGFTGPRCE 183
+PC + G+C + S+ C C GF G CE
Sbjct: 7 ESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38
Score = 37.1 bits (87), Expect = 0.001
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTG 1639
+GG C D +N Y C C G+ G
Sbjct: 12 LNGGSCKDDINSYECWCPFGFEG 34
Score = 34.4 bits (80), Expect = 0.014
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 601 NGGVCTALDGGHTCICPDNYSGRNCE 626
NGG C + C CP + G+NCE
Sbjct: 13 NGGSCKDDINSYECWCPFGFEGKNCE 38
Score = 34.4 bits (80), Expect = 0.015
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 381 DACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNC 417
D C SNPC C + SY C C G++G NC
Sbjct: 4 DQCESNPCLNGGSCKDDI---NSYECWCPFGFEGKNC 37
Score = 29.0 bits (66), Expect = 1.3
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEI 34
C NGG+C S+ C CP GF CE+
Sbjct: 11 CLNGGSCK-----DDINSYECWCPFGFEGKNCEL 39
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo
protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Length = 110
Score = 68.0 bits (167), Expect = 1e-13
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 18/90 (20%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDN 1884
D L+ AD+ D +G T LH AA +++ V +LL G
Sbjct: 38 DEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG----------------- 80
Query: 1885 FANREITDHMDRLPRDVASERLHHDIVRLL 1914
A+ D + D++ + + D+ +L
Sbjct: 81 -ADVXAQDKFGKTAFDISIDNGNEDLAEIL 109
Score = 39.1 bits (92), Expect = 0.001
Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 12/79 (15%)
Query: 1851 AAAVNNIDAVNILLSHGVNP------------REGSYGACKALLDNFANREITDHMDRLP 1898
++ ++ + L+ G + R G + L+ N A+ D P
Sbjct: 1 GSSHHHHHHSSGLVPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTP 60
Query: 1899 RDVASERLHHDIVRLLDEH 1917
+A+ H ++V+LL E
Sbjct: 61 LHLAARNGHLEVVKLLLEA 79
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor,
cytoplasm, phosphorylation, P53 binding protein, ANK
repeat, SH3 domain; 2.10A {Homo sapiens}
Length = 229
Score = 70.8 bits (174), Expect = 2e-13
Identities = 21/111 (18%), Positives = 33/111 (29%), Gaps = 18/111 (16%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-------------- 1870
+ + D + P+ G TALH A N V+ L++ G N
Sbjct: 35 EVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCA 94
Query: 1871 -REGSYGACKALLDNFANREITDHMD-RLPRDVASERL--HHDIVRLLDEH 1917
C AL+ + A T D + + D L +
Sbjct: 95 ASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADV 145
Score = 61.9 bits (151), Expect = 2e-10
Identities = 15/107 (14%), Positives = 26/107 (24%), Gaps = 18/107 (16%)
Query: 1829 YLINADADINVPDN---SGKTALHWAAAVNNIDAVNILLSHGVNP--------------- 1870
++ + L AA ++ V + +P
Sbjct: 3 SVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAI 62
Query: 1871 REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+Y L+ AN D P A+ I L +H
Sbjct: 63 CGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQH 109
Score = 53.8 bits (130), Expect = 1e-07
Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVN 1869
DCA+YL + + + + ++ AL +A D ++ V
Sbjct: 137 DCATYLADVEQSMGLMNSGAVYALWDYSA-EFGDELSFREGESVT 180
Score = 44.6 bits (106), Expect = 1e-04
Identities = 10/50 (20%), Positives = 14/50 (28%), Gaps = 3/50 (6%)
Query: 1829 YLINADADINVPDNSGKTALHWAAAVNNIDAV--NIL-LSHGVNPREGSY 1875
+ + D +T WAA V N L V P+
Sbjct: 173 FREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFPRVKPQRSKV 222
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats,
cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP:
d.211.1.1
Length = 327
Score = 69.3 bits (169), Expect = 2e-12
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 1822 NTDDCASYLINADADINVP-DNSGKTALHWAAAVNNIDAVNILLSHGVNPREG 1873
+ N ++N+P D G T LHW ++ N++ V L+ HG N G
Sbjct: 108 LLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYG 160
Score = 60.4 bits (146), Expect = 2e-09
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 1827 ASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP 1870
+N D++G T L+ AA + NI V+ LL +G +P
Sbjct: 266 LDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADP 309
Score = 51.6 bits (123), Expect = 1e-06
Identities = 15/113 (13%), Positives = 27/113 (23%), Gaps = 23/113 (20%)
Query: 1819 CLINTDDCASYLINADADINVPDNSGKTALHWAAAVNN---IDAVNILLSHG-------- 1867
I + +L+ ++ DN G++ L A N LL +
Sbjct: 139 TSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILED 198
Query: 1868 ------------VNPREGSYGACKALLDNFANREITDHMDRLPRDVASERLHH 1908
+ G A K LD + + +
Sbjct: 199 SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKP 251
Score = 46.9 bits (111), Expect = 4e-05
Identities = 6/34 (17%), Positives = 13/34 (38%)
Query: 1819 CLINTDDCASYLINADADINVPDNSGKTALHWAA 1852
+ L++ AD + + SG + + A
Sbjct: 291 ARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 324
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein
structure initiati midwest center F or structural
genomics, MCSG; 1.77A {Leptotrichia buccalis}
Length = 186
Score = 65.5 bits (160), Expect = 6e-12
Identities = 14/121 (11%), Positives = 27/121 (22%), Gaps = 28/121 (23%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVN------ILLSHGVNP-------- 1870
+ +LIN ADI G T D I L G +
Sbjct: 56 KISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYK 115
Query: 1871 -------REGSYGACKA-------LLDNFANREITDHMDRLPRDVASERLHHDIVRLLDE 1916
+ + I D + ++++++
Sbjct: 116 IVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMED 175
Query: 1917 H 1917
+
Sbjct: 176 Y 176
Score = 59.3 bits (144), Expect = 8e-10
Identities = 6/42 (14%), Positives = 14/42 (33%)
Query: 1829 YLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP 1870
+ + + D G TAL + A+ ++ +
Sbjct: 139 IFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKY 180
Score = 43.5 bits (103), Expect = 2e-04
Identities = 11/91 (12%), Positives = 22/91 (24%), Gaps = 18/91 (19%)
Query: 1843 SGKTALHWAAAVNNIDAVNILLSHGVNPR------------------EGSYGACKALLDN 1884
S + AA + + L G + E Y L++
Sbjct: 5 SEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINK 64
Query: 1885 FANREITDHMDRLPRDVASERLHHDIVRLLD 1915
A+ + + +DI +
Sbjct: 65 GADIKSRTKEGTTLFFPLFQGGGNDITGTTE 95
Score = 43.1 bits (102), Expect = 2e-04
Identities = 13/110 (11%), Positives = 24/110 (21%), Gaps = 24/110 (21%)
Query: 1829 YLINADADINVP---DNSGKTALHWAAAVNNIDAVNILLSHGVNP----REG-------- 1873
L + N L L++ G + +EG
Sbjct: 24 ELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83
Query: 1874 SYG---------ACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 1914
G CK L+ A+ ++ D ++
Sbjct: 84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMI 133
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6,
ankyrin reapeat, ANK RE calcium channel, calcium
transport, calmodulin-binding; 1.70A {Mus musculus}
Length = 232
Score = 66.5 bits (163), Expect = 6e-12
Identities = 23/129 (17%), Positives = 39/129 (30%), Gaps = 33/129 (25%)
Query: 1822 NTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP----------- 1870
+ + L +++ G+TALH AA +N++A +L+
Sbjct: 15 DVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYE 74
Query: 1871 ---------REGSYGACKALLDNFANREITDHMDRLPRDV-------------ASERLHH 1908
+ +ALL A+ A+
Sbjct: 75 GQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSE 134
Query: 1909 DIVRLLDEH 1917
+IVRLL EH
Sbjct: 135 EIVRLLIEH 143
Score = 61.1 bits (149), Expect = 4e-10
Identities = 11/54 (20%), Positives = 18/54 (33%), Gaps = 6/54 (11%)
Query: 1825 DCASYLINADADIN------VPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE 1872
+ L++ D + VP+N G T A NI L+ +
Sbjct: 172 QMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAA 225
Score = 59.2 bits (144), Expect = 2e-09
Identities = 19/131 (14%), Positives = 38/131 (29%), Gaps = 38/131 (29%)
Query: 1825 DCASYLINADADINVPDNS-------------GKTALHWAAAVNNIDAVNILLSHGVNPR 1871
+ L+ A ++ G+ L +AA V + + V +L+ HG + R
Sbjct: 89 NLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR 148
Query: 1872 EG-SYG------------------ACKALLDNFAN------REITDHMDRLPRDVASERL 1906
S G LL + ++ P +A
Sbjct: 149 AQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEG 208
Query: 1907 HHDIVRLLDEH 1917
+ + + L +
Sbjct: 209 NIVMFQHLMQK 219
Score = 43.7 bits (104), Expect = 2e-04
Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 19/75 (25%)
Query: 1844 GKTALHWAAAVNNIDAVN-ILLSHGVNPREGSYGACKALLDNFANREITDHMDRLPRDVA 1902
++ L AA N++ A++ +L G + AL H +A
Sbjct: 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETAL-----------H-------IA 44
Query: 1903 SERLHHDIVRLLDEH 1917
+ + + +L E
Sbjct: 45 ALYDNLEAAMVLMEA 59
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion;
HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Length = 186
Score = 65.4 bits (158), Expect = 7e-12
Identities = 29/160 (18%), Positives = 45/160 (28%), Gaps = 21/160 (13%)
Query: 1059 PCEHDGTCVNTPGSFACNCTQGFTGPRCETNVN-----------ECESHPCQNDGSCLDD 1107
+G V F C C +G T C +
Sbjct: 11 TICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQ 70
Query: 1108 PGTFRCVCMPGFTGTQCETDIDECASNPCLNGG----ICNDLINTFKCACPIGFTGSHCQ 1163
+ C C+ G+T + +D C C G I + C+C IG +
Sbjct: 71 VNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPED 130
Query: 1164 ------INIDDCVSSPCHNGGICKDSIAGYTCECLAGFTG 1197
C + +C + Y C+C+ GFT
Sbjct: 131 EXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTF 170
Score = 61.6 bits (148), Expect = 1e-10
Identities = 28/209 (13%), Positives = 51/209 (24%), Gaps = 47/209 (22%)
Query: 944 DVDECQLS-SPCRNGATCHNTNGSYLCECAKGYEGRDCLINTD-----------DCASFP 991
+ + ++ + + C C +G + C F
Sbjct: 1 EAEASAVTVDTICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFG 60
Query: 992 CQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYS 1051
+V Y C C++G++ +D C C C
Sbjct: 61 QCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIV------------- 107
Query: 1052 WFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCE------TNVNECESHPCQNDGSCL 1105
++ S C+C G + T C+ ++ C
Sbjct: 108 -------------EYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCX 154
Query: 1106 DDPGTFRCVCMPGFTGTQCE---TDIDEC 1131
+ G + C CM GFT
Sbjct: 155 NVEGVYXCQCMEGFTFDXEXNVCLGPHHH 183
Score = 56.2 bits (134), Expect = 8e-09
Identities = 28/173 (16%), Positives = 46/173 (26%), Gaps = 24/173 (13%)
Query: 1210 NPCHRGECIDGENSFTCACHPGFTGALCNTQLD-----------ECASNPCQFGGQCEDL 1258
C G+ + N F C C+ G NT + C
Sbjct: 11 TICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQ 70
Query: 1259 INGYQCRCKPGTSGTNCEININECYSNPCRNGAK----CVDGINRYSCECLPGYTGLHCE 1314
+N Y C C G + ++ C C + + I C C G +
Sbjct: 71 VNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPED 130
Query: 1315 ------TNINECASNPCANGGVCVDLIDGFKCECPRGYY---DARCLSDVDEC 1358
T C + VC ++ + C+C G+ +
Sbjct: 131 EXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTFDXEXNVCLGPHHH 183
Score = 54.7 bits (130), Expect = 3e-08
Identities = 32/173 (18%), Positives = 45/173 (26%), Gaps = 21/173 (12%)
Query: 155 PCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECE------SHPCQNDGSCLDDPGTFR 208
+G V F C C +G T E C G C+++P +
Sbjct: 11 TICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQ 70
Query: 209 C---VCMCEPGYTGQNCESKYVPCDPSPCQNGGVCREL---DNLNYECECQSGYRGKNCE 262
C C GYT C C G C + + C C G +
Sbjct: 71 VNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPED 130
Query: 263 E------NIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCE---QDVDEC 306
E C + C + Y C C+ +T D
Sbjct: 131 EXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTFDXEXNVCLGPHHH 183
Score = 54.3 bits (129), Expect = 5e-08
Identities = 30/171 (17%), Positives = 42/171 (24%), Gaps = 22/171 (12%)
Query: 1087 ETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDID-----------ECASNP 1135
E + +G + F C+C G T + C
Sbjct: 1 EAEASAVTVDTICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFG 60
Query: 1136 CLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGG----ICKDSIAGYTCEC 1191
+N + C C G+T +D C C G I C C
Sbjct: 61 QCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSC 120
Query: 1192 LAGFTGMSCE------TNINDCASNPCH-RGECIDGENSFTCACHPGFTGA 1235
G + T C C + E + C C GFT
Sbjct: 121 AIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTFD 171
Score = 52.7 bits (125), Expect = 1e-07
Identities = 27/186 (14%), Positives = 47/186 (25%), Gaps = 25/186 (13%)
Query: 1125 ETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINID-----------DCVSSP 1173
E + + G + N F C C G + C
Sbjct: 1 EAEASAVTVDTICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFG 60
Query: 1174 CHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRG-----ECIDGENSFTCAC 1228
+ Y C C+ G+T ++ C C E + S C+C
Sbjct: 61 QCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSC 120
Query: 1229 HPGFTGALCN------TQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCE---INI 1279
G + T C C ++ Y C+C G + +
Sbjct: 121 AIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTFDXEXNVCLGP 180
Query: 1280 NECYSN 1285
+ + +
Sbjct: 181 HHHHHH 186
Score = 52.0 bits (123), Expect = 3e-07
Identities = 28/170 (16%), Positives = 42/170 (24%), Gaps = 21/170 (12%)
Query: 1276 EININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNIN-----------ECASNP 1324
E + + + V N + C C G L T C
Sbjct: 1 EAEASAVTVDTICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFG 60
Query: 1325 CANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCE----DGLNQFICHC 1380
++ + C C GY +D C C G C + C C
Sbjct: 61 QCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSC 120
Query: 1381 KPGYGGKRCE------FDIDECGSNPCQHGGICTDHLNGYTCECQIGYTG 1424
G + C +C + Y C+C G+T
Sbjct: 121 AIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTF 170
Score = 51.6 bits (122), Expect = 3e-07
Identities = 25/177 (14%), Positives = 41/177 (23%), Gaps = 20/177 (11%)
Query: 302 DVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNID-----------DCAGAA 350
+ + ++ F C+C G + + C
Sbjct: 1 EAEASAVTVDTICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFG 60
Query: 351 CFNGATCIDRVGSFYCQCTPG--KTGLLCHLEDACTSNPCHADAICDTNPIINGSYTCSC 408
+V + C C G C L+ N + S CSC
Sbjct: 61 QCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSC 120
Query: 409 ASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTG 465
A G N ++ C C ++ Y C C +T
Sbjct: 121 AIGXVP-------NPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTF 170
Score = 50.8 bits (120), Expect = 6e-07
Identities = 28/177 (15%), Positives = 48/177 (27%), Gaps = 23/177 (12%)
Query: 874 PCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQD------ 927
G + + N + C+C + + G C +
Sbjct: 11 TICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQ 70
Query: 928 ---FACHCGVGWTGRYCNEDVDECQLSSPCRNG---ATCHNTNGSYLCECAKGYEGRDC- 980
+ C C G+T +D CQ + +G + S C CA G
Sbjct: 71 VNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPED 130
Query: 981 -----LINTDDCASFPCQNGGTCLDEVGDYSCLCVDGFSG----KHCEVDIDECSSN 1028
C + C + G Y C C++GF+ C + +
Sbjct: 131 EXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTFDXEXNVC-LGPHHHHHH 186
Score = 50.4 bits (119), Expect = 7e-07
Identities = 27/188 (14%), Positives = 46/188 (24%), Gaps = 26/188 (13%)
Query: 262 EENIDDCPGNLCQNGATCMDGINKYSCLCLATYTG---------DLCEQDVDECSIRPSV 312
E + + N + C+C + C + +
Sbjct: 1 EAEASAVTVDTICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFG 60
Query: 313 CHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGA----TCIDRVGSFYCQC 368
V + C C+ G+T + + +D C C + + S C C
Sbjct: 61 QCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSC 120
Query: 369 TPGKTGLLCHL-------EDACTSNPCHADAICDTNPIINGSYTCSCASGYKG---VNCS 418
G E AC + +C G Y C C G+ N
Sbjct: 121 AIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVE---GVYXCQCMEGFTFDXEXNVC 177
Query: 419 EDINECEQ 426
+
Sbjct: 178 LGPHHHHH 185
Score = 48.9 bits (115), Expect = 3e-06
Identities = 26/164 (15%), Positives = 39/164 (23%), Gaps = 21/164 (12%)
Query: 1314 ETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVD-----------ECASDP 1362
E + + G V + + F C C G + + C
Sbjct: 1 EAEASAVTVDTICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFG 60
Query: 1363 CLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGG----ICTDHLNGYTCEC 1418
+N + C C GY +D C C G + C C
Sbjct: 61 QCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSC 120
Query: 1419 QIGYTGINCE------INIDDCAFKPCRHGGTCIDLVNAYKCVC 1456
IG + C C ++ Y C C
Sbjct: 121 AIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQC 164
Score = 44.3 bits (103), Expect = 1e-04
Identities = 21/164 (12%), Positives = 42/164 (25%), Gaps = 22/164 (13%)
Query: 116 CVDDPCVHGECFNTHGSYTFQMIFIFFTN-------------QYSWFLIAGSPCEHDGTC 162
VD C +G+ + + +
Sbjct: 8 TVDTICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPD 67
Query: 163 VNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDG----SCLDDPGTFRCVCMCEPGYT 218
+ C C +G+T ++ C+ C G L + + C C
Sbjct: 68 PAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPN 127
Query: 219 GQN----CESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRG 258
++ + C + VC ++ Y C+C G+
Sbjct: 128 PEDEXXCTXTGETACQLXCNTDNEVCXNVEG-VYXCQCMEGFTF 170
Score = 43.1 bits (100), Expect = 3e-04
Identities = 26/187 (13%), Positives = 42/187 (22%), Gaps = 29/187 (15%)
Query: 518 EGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAP 577
E + + + +G VQ+ N++ C C G + + +
Sbjct: 1 EAEASAVTVDTICXNGQ--LVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGE 58
Query: 578 LTVLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPC 637
A + C C + Y+ C C
Sbjct: 59 F-------------------GQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNC 99
Query: 638 QNGGFCRSK---EGGGYRCDCPPGATGTH-----CELDSRNECYSNPCQHAGTCEDRIAD 689
G C + E C C G C C C +
Sbjct: 100 GESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGV 159
Query: 690 YACYCLP 696
Y C C+
Sbjct: 160 YXCQCME 166
Score = 38.9 bits (89), Expect = 0.006
Identities = 25/116 (21%), Positives = 32/116 (27%), Gaps = 7/116 (6%)
Query: 869 DCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSA--NFQ 926
C VN Y C C YT + LD C C C Q
Sbjct: 55 ACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQ 114
Query: 927 DFACHCGVGWTGRYCN----EDVDECQLSS-PCRNGATCHNTNGSYLCECAKGYEG 977
C C +G + E + C N G Y C+C +G+
Sbjct: 115 SAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTF 170
Score = 38.9 bits (89), Expect = 0.006
Identities = 28/134 (20%), Positives = 44/134 (32%), Gaps = 15/134 (11%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLD--- 57
C G C P+ + C C G++ V + C C G C ++ L
Sbjct: 56 CGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTC-VLDVCQYXNCGESGECIVEYLSEIQ 114
Query: 58 RYTCTCAPGFTGSQCEL-------QDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCS 110
C+CA G + + + C + VC ++E Y C C GF
Sbjct: 115 SAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTF---D 171
Query: 111 EDIIECVD-DPCVH 123
+ C+ H
Sbjct: 172 XEXNVCLGPHHHHH 185
Score = 38.9 bits (89), Expect = 0.007
Identities = 25/130 (19%), Positives = 35/130 (26%), Gaps = 15/130 (11%)
Query: 1353 SDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDID-----------ECGSNPC 1401
++ D G N F C C G + CG
Sbjct: 2 AEASAVTVDTICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQ 61
Query: 1402 QHGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGG----TCIDLVNAYKCVCA 1457
+N Y C C GYT +D C + C G + + + C CA
Sbjct: 62 CIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCA 121
Query: 1458 KAGNHRCDDE 1467
+DE
Sbjct: 122 IGXVPNPEDE 131
Score = 36.6 bits (83), Expect = 0.036
Identities = 23/162 (14%), Positives = 34/162 (20%), Gaps = 28/162 (17%)
Query: 59 YTCTCAPGFTGSQCE------------LQDHCASSPCRNGAVCTSLEDTYECDCAPGFVG 106
+ C C G L C + + Y C C G+
Sbjct: 25 FXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTL 84
Query: 107 QTCSEDIIECVDDPCVHG-----ECFNTHGSYTFQMIFIFFTNQYSWF--------LIAG 153
+ + C C E + S N
Sbjct: 85 XEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQL 144
Query: 154 SPCEHDGTCVNTPGSFACNCTQGFTG---PRCETNVNECESH 192
+ C N G + C C +GFT + H
Sbjct: 145 XCNTDNEVCXNVEGVYXCQCMEGFTFDXEXNVCLGPHHHHHH 186
Score = 31.9 bits (71), Expect = 1.2
Identities = 14/120 (11%), Positives = 35/120 (29%), Gaps = 2/120 (1%)
Query: 441 PCRHGGTCIDLVNAYKCVCQVPYTGHDCH--QKLDPCVPNSACVRCLTPGMIVIRSWILV 498
G + + N + C+C + ++ + C + C G +
Sbjct: 11 TICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQ 70
Query: 499 YRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCE 558
G C D+ + + S ++ + + + C+C G + +
Sbjct: 71 VNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPED 130
Score = 30.8 bits (68), Expect = 3.1
Identities = 12/72 (16%), Positives = 18/72 (25%), Gaps = 7/72 (9%)
Query: 1620 GICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDKVGG 1679
+ C C IG + C +N C + G
Sbjct: 107 VEYLSEIQSAGCSCAIGXVP-------NPEDEXXCTXTGETACQLXCNTDNEVCXNVEGV 159
Query: 1680 FECRCPPGFVGS 1691
+ C+C GF
Sbjct: 160 YXCQCMEGFTFD 171
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A
{Mus musculus}
Length = 525
Score = 68.9 bits (168), Expect = 9e-12
Identities = 62/312 (19%), Positives = 92/312 (29%), Gaps = 46/312 (14%)
Query: 1085 RCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICND 1144
C + E P ++ C+C G CE +D P N
Sbjct: 253 NCFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNS 312
Query: 1145 LINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNI 1204
C S C ++ +++ +GG+C C G +CE
Sbjct: 313 NACK---KCNCNEHSSSCHFDMAVFLATGNVSGGVC--------DNCQHNTMGRNCE--- 358
Query: 1205 NDCASNPCHRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQC 1264
P + C P C+ E + LI G QC
Sbjct: 359 ---QCKPFYFQHPERDIRD-PNLCEPCT----CDPAGSENGGICDGYTDFSVGLIAG-QC 409
Query: 1265 RCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNP 1324
RCK G C+ C +G S E G C NP
Sbjct: 410 RCKLHVEGERCD---------------VCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNP 454
Query: 1325 C-ANGGVCV--DLIDGFKCE-CPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQF--IC 1378
C + G C L+ G +C+ C ++ D+D C C GG + ++ C
Sbjct: 455 CDSETGYCYCKRLVTGQRCDQCLPQHWGLSN--DLDGCRPCDCDLGGALNNSCSEDSGQC 512
Query: 1379 HCKPGYGGKRCE 1390
C P G++C
Sbjct: 513 SCLPHMIGRQCN 524
Score = 55.1 bits (132), Expect = 2e-07
Identities = 50/293 (17%), Positives = 74/293 (25%), Gaps = 52/293 (17%)
Query: 906 DPCVPNRCQ---HGARCTPSANFQDFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHN 962
D V C H + C P + G N C+L +
Sbjct: 247 DMVVRGNCFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRP 306
Query: 963 TNGSYLCECAKGYE---GRDCLINTDDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCE 1019
G C K C + + +GG C + C G++CE
Sbjct: 307 AEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGGVCDN--------CQHNTMGRNCE 358
Query: 1020 VDID---ECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACN 1076
+ + C N C
Sbjct: 359 QCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQ--------CR 410
Query: 1077 CTQGFTGPRCE-----------TNVNECESHPCQNDGSCLD----DPGTFRCVCMPGFTG 1121
C G RC+ + C+S C G+ D T C C TG
Sbjct: 411 CKLHVEGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTG 470
Query: 1122 TQCE----------TDIDECASNPCLNGGICNDL--INTFKCACPIGFTGSHC 1162
+C+ D+D C C GG N+ ++ +C+C G C
Sbjct: 471 QRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQC 523
Score = 46.6 bits (110), Expect = 8e-05
Identities = 56/299 (18%), Positives = 72/299 (24%), Gaps = 70/299 (23%)
Query: 154 SPCEHDGTCVNTPGSFACNCTQGFTGPRCE----------------TNVNECE------- 190
+P + V C C G CE N N C+
Sbjct: 264 APVDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEH 323
Query: 191 SHPCQNDGSCLDDPGTFR--CVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNY 248
S C D + G C+ G+NCE P R++ + N
Sbjct: 324 SSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCK------PFYFQHPERDIRDPNL 377
Query: 249 ECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSI 308
C G D A C C G+ C+
Sbjct: 378 CEPCTCDPAGSENGGICDGYTDFSVGLIAGQ--------CRCKLHVEGERCDV------- 422
Query: 309 RPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGA---TCIDRVGSFY 365
C S G C+ G C + C V
Sbjct: 423 ----------CKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQR 472
Query: 366 C-QCTPGKTGLLCHLEDACTSNPCH----ADAICDTNPIINGSYTCSCASGYKGVNCSE 419
C QC P GL L D C C + C + S CSC G C+E
Sbjct: 473 CDQCLPQHWGLSNDL-DGCRPCDCDLGGALNNSCSED-----SGQCSCLPHMIGRQCNE 525
Score = 43.1 bits (101), Expect = 8e-04
Identities = 45/271 (16%), Positives = 65/271 (23%), Gaps = 49/271 (18%)
Query: 37 ANSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTY 96
A+ C +N + C C G CE
Sbjct: 260 ASECAPVDGVNEEVEGMVHG---HCMCRHNTKGLNCE--LCMDFYHDLPWRPAEGRNSNA 314
Query: 97 ECDCAPGFVGQTCSEDIIECVDDPCVHGECF-----NTHGSYTFQMIFIFFTNQ------ 145
C +C D+ + V G NT G Q +F +
Sbjct: 315 CKKCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRD 374
Query: 146 ---------YSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCE-----------TN 185
G C+ + C C G RC+ +
Sbjct: 375 PNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAED 434
Query: 186 VNECESHPCQNDGSCLDDPGTFRC--VCMCEPGYTGQNCE----------SKYVPCDPSP 233
C+S C G+ C C+ TGQ C+ + C P
Sbjct: 435 PYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCD 494
Query: 234 CQNGGVCREL-DNLNYECECQSGYRGKNCEE 263
C GG + +C C G+ C E
Sbjct: 495 CDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 525
Score = 42.0 bits (98), Expect = 0.002
Identities = 39/244 (15%), Positives = 61/244 (25%), Gaps = 36/244 (14%)
Query: 1248 PCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPG 1307
++ Y NC + P + V+G+ C C
Sbjct: 227 GDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPVDGVNEEVEGMVHGHCMCRHN 286
Query: 1308 YTGLHCE----------------TNINECASNPCANGGVCVDLIDGFKCECPRGYYDARC 1351
GL+CE N N C C D C
Sbjct: 287 TKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSS-CHFDMAVFLATGNVSGGVC 345
Query: 1352 LSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHL 1411
+ C C+ Q + CE C ++GGIC +
Sbjct: 346 DNCQHNTMGRNC---EQCKPFYFQ--HPERDIRDPNLCEP--CTCDPAGSENGGICDGYT 398
Query: 1412 NGY------TCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCAKAGNHRCD 1465
+ C C++ G C++ C K + + D C C G
Sbjct: 399 DFSVGLIAGQCRCKLHVEGERCDV----C--KEGFYDLSAEDPYGCKSCACNPLGTIPGG 452
Query: 1466 DECN 1469
+ C+
Sbjct: 453 NPCD 456
Score = 35.8 bits (82), Expect = 0.15
Identities = 50/231 (21%), Positives = 66/231 (28%), Gaps = 55/231 (23%)
Query: 517 CEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEV-----KDLAVKVTSMNA 571
C G +EC + V HC CR G +CE+ DL +
Sbjct: 256 CYGHASECAPVDGVNEEVEGMVHG----HCMCRHNTKGLNCELCMDFYHDLPWRPAEGRN 311
Query: 572 SPTLAPLTVLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCE----- 626
S + + A +GGVC C N GRNCE
Sbjct: 312 SNACKKCNCNEHSSSCHFDMAVFLATGNVSGGVC--------DNCQHNTMGRNCEQCKPF 363
Query: 627 YFGY--------------DCDSNPCQNGGFCRSKEGG-----GYRCDCPPGATGTHCE-- 665
YF + CD +NGG C +C C G C+
Sbjct: 364 YFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVC 423
Query: 666 --------LDSRNECYSNPCQHAGTCEDRIADYA----CYCLPMWNGKNCD 704
+ C S C GT + CYC + G+ CD
Sbjct: 424 KEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD 474
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2
precursor; CD97, CD55, 7TM, calcium-binding, cell
adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A
2box_A
Length = 143
Score = 61.8 bits (150), Expect = 4e-11
Identities = 38/177 (21%), Positives = 53/177 (29%), Gaps = 60/177 (33%)
Query: 944 DVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDD--------CASF---PC 992
D C + C ++C N + C C G+ +I T CA+ C
Sbjct: 1 DSRGC--ARWCPQDSSCVN---ATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSC 55
Query: 993 QNGGTCLDEVGDYSCLCVDGF------------SGKHCEVDIDECSSNPCHNGATCNQFQ 1040
C + G Y C+C G+ S C D+DECSS
Sbjct: 56 GKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTC-QDVDECSSGQ----------- 103
Query: 1041 MIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCE---TNVNECE 1094
C+ C NT GS++C C G+ CE
Sbjct: 104 -----------------HQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVCE 143
Score = 60.2 bits (146), Expect = 2e-10
Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 32/139 (23%)
Query: 1059 PCEHDGTCVNTPGSFACNCTQGFTGPRCETN--------VNECES---HPCQNDGSCLDD 1107
C D +CVN + AC C GF+ +NEC + C C +
Sbjct: 8 WCPQDSSCVN---ATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNT 64
Query: 1108 PGTFRCVCMPGFT------------GTQCETDIDECASN--PCLNGGICNDLINTFKCAC 1153
G++ CVC PG+ C D+DEC+S C + +C + + ++ C C
Sbjct: 65 EGSYDCVCSPGYEPVSGAKTFKNESENTC-QDVDECSSGQHQCDSSTVCFNTVGSYSCRC 123
Query: 1154 PIGFTGSHCQ---INIDDC 1169
G+ H C
Sbjct: 124 RPGWKPRHGIPNNQKDTVC 142
Score = 59.1 bits (143), Expect = 4e-10
Identities = 34/173 (19%), Positives = 56/173 (32%), Gaps = 47/173 (27%)
Query: 1278 NINECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETN--------INECAS---NPCA 1326
+ C + C + C +N +C C PG++ INECA+ C
Sbjct: 1 DSRGC-ARWCPQDSSC---VNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCG 56
Query: 1327 NGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGG 1386
C + + C C GY V + + TC+D
Sbjct: 57 KFSDCWNTEGSYDCVCSPGY------EPVSGAKTFKNESENTCQD--------------- 95
Query: 1387 KRCEFDIDEC--GSNPCQHGGICTDHLNGYTCECQIGYTGINCE---INIDDC 1434
+DEC G + C +C + + Y+C C+ G+ + C
Sbjct: 96 ------VDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVC 142
Score = 58.7 bits (142), Expect = 5e-10
Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 47/176 (26%)
Query: 264 NIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCE--------QDVDECSIRPSV-CH 314
+ C C ++C +N +C C ++ D++EC+ V C
Sbjct: 1 DSRGC-ARWCPQDSSC---VNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCG 56
Query: 315 NGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTG 374
+ C N+ G + C+C G+ + + + TC D
Sbjct: 57 KFSDCWNTEGSYDCVCSPGYEPVSGAKTFKN------ESENTCQDV-------------- 96
Query: 375 LLCHLEDACTSN--PCHADAICDTNPIINGSYTCSCASGYKGVNCS---EDINECE 425
D C+S C + +C GSY+C C G+K + + CE
Sbjct: 97 ------DECSSGQHQCDSSTVCFNTV---GSYSCRCRPGWKPRHGIPNNQKDTVCE 143
Score = 58.3 bits (141), Expect = 7e-10
Identities = 31/144 (21%), Positives = 50/144 (34%), Gaps = 29/144 (20%)
Query: 1089 NVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCE--------TDIDECAS---NPCL 1137
+ C + C D SC+ C C PGF+ DI+ECA+ C
Sbjct: 1 DSRGC-ARWCPQDSSCV---NATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCG 56
Query: 1138 NGGICNDLINTFKCACPIGFTGSHCQIN-----------IDDCVS--SPCHNGGICKDSI 1184
C + ++ C C G+ +D+C S C + +C +++
Sbjct: 57 KFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTV 116
Query: 1185 AGYTCECLAGFTGMSCE-TNINDC 1207
Y+C C G+ N D
Sbjct: 117 GSYSCRCRPGWKPRHGIPNNQKDT 140
Score = 55.6 bits (134), Expect = 5e-09
Identities = 30/122 (24%), Positives = 40/122 (32%), Gaps = 23/122 (18%)
Query: 248 YECECQSGYRGKNCEEN--------IDDC---PGNLCQNGATCMDGINKYSCLCLATYTG 296
C C G+ + I++C C + C + Y C+C Y
Sbjct: 19 TACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEP 78
Query: 297 DLCE-----------QDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLN-ID 344
QDVDECS C + C N+VG +SC C GW N
Sbjct: 79 VSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQK 138
Query: 345 DC 346
D
Sbjct: 139 DT 140
Score = 54.8 bits (132), Expect = 1e-08
Identities = 33/142 (23%), Positives = 50/142 (35%), Gaps = 29/142 (20%)
Query: 1242 DECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEIN--------INECYS---NPCRNG 1290
CA C C +N CRC PG S + I INEC + C
Sbjct: 3 RGCA-RWCPQDSSC---VNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKF 58
Query: 1291 AKCVDGINRYSCECLPGYTGLHCETN-----------INECASN--PCANGGVCVDLIDG 1337
+ C + Y C C PGY + ++EC+S C + VC + +
Sbjct: 59 SDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGS 118
Query: 1338 FKCECPRGYY-DARCLSDVDEC 1358
+ C C G+ ++ +
Sbjct: 119 YSCRCRPGWKPRHGIPNNQKDT 140
Score = 53.7 bits (129), Expect = 3e-08
Identities = 35/172 (20%), Positives = 52/172 (30%), Gaps = 46/172 (26%)
Query: 1127 DIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQIN--------IDDCVSS---PCH 1175
D CA C C +N C C GF+ I I++C + C
Sbjct: 1 DSRGCA-RWCPQDSSC---VNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCG 56
Query: 1176 NGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRGECIDGENSFTCACHPGFTGA 1235
C ++ Y C C G+ +S + + N C
Sbjct: 57 KFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTC----------------------- 93
Query: 1236 LCNTQLDECASN--PCQFGGQCEDLINGYQCRCKPGTSGTNCE---ININEC 1282
+DEC+S C C + + Y CRC+PG + C
Sbjct: 94 ---QDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVC 142
Score = 52.5 bits (126), Expect = 7e-08
Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 35/145 (24%)
Query: 1354 DVDECASDPCLNGGTCEDGLNQFICHCKPGY---------GGKRCEFDIDEC---GSNPC 1401
D CA C +C +N C C PG+ + C+ DI+EC C
Sbjct: 1 DSRGCA-RWCPQDSSC---VNATACRCNPGFSSFSEIITTPMETCD-DINECATLSKVSC 55
Query: 1402 QHGGICTDHLNGYTCECQIGYTGINCEIN-----------IDDCAFK--PCRHGGTCIDL 1448
C + Y C C GY ++ +D+C+ C C +
Sbjct: 56 GKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNT 115
Query: 1449 VNAYKCVCA-----KAGNHRCDDEC 1468
V +Y C C + G +
Sbjct: 116 VGSYSCRCRPGWKPRHGIPNNQKDT 140
Score = 48.3 bits (115), Expect = 2e-06
Identities = 32/158 (20%), Positives = 50/158 (31%), Gaps = 46/158 (29%)
Query: 80 SSPCRNGAVCTSLEDTYECDCAPGF--VGQTCSEDIIECVDDPCVHGECFNTHGSYTFQM 137
+ C + C + C C PGF + + + C D EC
Sbjct: 6 ARWCPQDSSCV---NATACRCNPGFSSFSEIITTPMETCDDI----NECATL-------- 50
Query: 138 IFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETN-----------V 186
+ C C NT GS+ C C+ G+ V
Sbjct: 51 --------------SKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDV 96
Query: 187 NECES--HPCQNDGSCLDDPGTFRCVCMCEPGYTGQNC 222
+EC S H C + C + G++ C C PG+ ++
Sbjct: 97 DECSSGQHQCDSSTVCFNTVGSYSCRCR--PGWKPRHG 132
Score = 47.5 bits (113), Expect = 4e-06
Identities = 34/168 (20%), Positives = 52/168 (30%), Gaps = 53/168 (31%)
Query: 44 PCMNGGTCTLKSLDRYTCTCAPGFTGSQCELQ---------DHCASS---PCRNGAVCTS 91
C +C + C C PGF+ + + CA+ C + C +
Sbjct: 8 WCPQDSSCV----NATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWN 63
Query: 92 LEDTYECDCAPGFV-----GQTCSEDIIECVD-DPCVHGECFNTHGSYTFQMIFIFFTNQ 145
E +Y+C C+PG+ +E C D D C G+
Sbjct: 64 TEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQ-------------------- 103
Query: 146 YSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCE---TNVNECE 190
C+ C NT GS++C C G+ CE
Sbjct: 104 --------HQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVCE 143
Score = 47.5 bits (113), Expect = 4e-06
Identities = 32/145 (22%), Positives = 47/145 (32%), Gaps = 31/145 (21%)
Query: 866 NIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDP--CV---------PNRCQ 914
+ CA + C +C+ NA C C ++ C C
Sbjct: 1 DSRGCA-RWCPQDSSCV---NATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCG 56
Query: 915 HGARCTPSANFQ-DFACHCGVGWTGRYCN-----------EDVDECQL-SSPCRNGATCH 961
+ C N + + C C G+ +DVDEC C + C
Sbjct: 57 KFSDCW---NTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCF 113
Query: 962 NTNGSYLCECAKGYEGRDCLINTDD 986
NT GSY C C G++ R + N
Sbjct: 114 NTVGSYSCRCRPGWKPRHGIPNNQK 138
Score = 43.3 bits (102), Expect = 1e-04
Identities = 33/185 (17%), Positives = 50/185 (27%), Gaps = 62/185 (33%)
Query: 385 SNPCHADAICDTNPIINGSYTCSCASGYKGVNCS--------EDINECEQGINCEINIDD 436
+ C D+ C + C C G+ + +DINEC
Sbjct: 6 ARWCPQDSSC------VNATACRCNPGFSSFSEIITTPMETCDDINECATLSKV------ 53
Query: 437 CAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNSACVRCLTPGMIVIRSWI 496
C C + +Y CVC Y +
Sbjct: 54 ----SCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKN---------------------- 87
Query: 497 LVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRH 556
+ C+ D++EC S + C V +Y C CRPG+ RH
Sbjct: 88 ---------------ESENTCQ-DVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRH 131
Query: 557 CEVKD 561
+
Sbjct: 132 GIPNN 136
Score = 39.8 bits (93), Expect = 0.002
Identities = 15/75 (20%), Positives = 26/75 (34%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDK 1676
C + Y C C GY + + +++ C ++ C +
Sbjct: 56 GKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNT 115
Query: 1677 VGGFECRCPPGFVGS 1691
VG + CRC PG+
Sbjct: 116 VGSYSCRCRPGWKPR 130
Score = 35.9 bits (83), Expect = 0.036
Identities = 14/67 (20%), Positives = 21/67 (31%), Gaps = 6/67 (8%)
Query: 1627 NGYTCECQIGYTGGYISLNMSTSTLGII--CEINVPDCLPGACHNNGTCVDKVGGFECRC 1684
N C C G++ + T I C C C + G ++C C
Sbjct: 17 NATACRCNPGFSSFSEIITTPMETCDDINECATLSKVS----CGKFSDCWNTEGSYDCVC 72
Query: 1685 PPGFVGS 1691
PG+
Sbjct: 73 SPGYEPV 79
Score = 30.6 bits (69), Expect = 2.4
Identities = 27/165 (16%), Positives = 46/165 (27%), Gaps = 37/165 (22%)
Query: 520 DINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAPLT 579
D C + C + VN C C PG+ + +N
Sbjct: 1 DSRGC-ARWCPQDSSC-----VNATACRCNPGFSSFSEIITTPMETCDDIN--------- 45
Query: 580 VLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQN 639
+ ++ C +G + C+C Y + + N CQ+
Sbjct: 46 ----------ECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQD 95
Query: 640 GGFCRSKEG------------GGYRCDCPPGATGTHCELDSRNEC 672
C S + G Y C C PG H +++ +
Sbjct: 96 VDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDT 140
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein,
repeat, signal, multigene family, disease mutation,
matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1
g.3.11.1 PDB: 1emo_A
Length = 82
Score = 59.1 bits (144), Expect = 6e-11
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 1088 TNVNECESHPCQNDGSCLDDPGTFRCVCMPGFT--GTQCETDIDECASNPCLNGGICNDL 1145
+++EC+ G C++ G++RC C G+ G +C D DEC+ G C ++
Sbjct: 3 VDMDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECV-DTDECSVGNPCGNGTCKNV 61
Query: 1146 INTFKCACPIGFTGS---HCQ 1163
I F+C C GF C+
Sbjct: 62 IGGFECTCEEGFEPGPMMTCE 82
Score = 57.2 bits (139), Expect = 3e-10
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 943 EDVDECQLSSPCRNGATCHNTNGSYLCECAKGYE--GRDCLINTDDCASFPCQNGGTCLD 1000
D+DEC+ C++G C NT+GSY CEC GY G +C ++TD+C+ GTC +
Sbjct: 3 VDMDECKEPDVCKHG-QCINTDGSYRCECPFGYILAGNEC-VDTDECSVGNPCGNGTCKN 60
Query: 1001 EVGDYSCLCVDGF---SGKHCE 1019
+G + C C +GF CE
Sbjct: 61 VIGGFECTCEEGFEPGPMMTCE 82
Score = 56.1 bits (136), Expect = 7e-10
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 1126 TDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQ-INIDDCVSSPCHNGGICKDSI 1184
D+DEC G C + +++C CP G+ + + ++ D+C G CK+ I
Sbjct: 3 VDMDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGNGTCKNVI 62
Query: 1185 AGYTCECLAGFT---GMSCE 1201
G+ C C GF M+CE
Sbjct: 63 GGFECTCEEGFEPGPMMTCE 82
Score = 53.0 bits (128), Expect = 1e-08
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 1315 TNINECASNPCANGGVCVDLIDGFKCECPRGYY-DARCLSDVDECASDPCLNGGTCEDGL 1373
+++EC G C++ ++CECP GY D DEC+ GTC++ +
Sbjct: 3 VDMDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGNGTCKNVI 62
Query: 1374 NQFICHCKPGY---GGKRCE 1390
F C C+ G+ CE
Sbjct: 63 GGFECTCEEGFEPGPMMTCE 82
Score = 53.0 bits (128), Expect = 1e-08
Identities = 25/103 (24%), Positives = 34/103 (33%), Gaps = 31/103 (30%)
Query: 1020 VDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQ 1079
VD+DEC G C+NT GS+ C C
Sbjct: 3 VDMDECKEPDVC------------------------------KHGQCINTDGSYRCECPF 32
Query: 1080 GFTGPRCE-TNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTG 1121
G+ E + +EC +G+C + G F C C GF
Sbjct: 33 GYILAGNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEP 75
Score = 52.2 bits (126), Expect = 2e-08
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 1164 INIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCE-TNINDCA-SNPCHRGECIDGE 1221
+++D+C G C ++ Y CEC G+ E + ++C+ NPC G C +
Sbjct: 3 VDMDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGNGTCKNVI 62
Query: 1222 NSFTCACHPGFTGALCNT 1239
F C C GF T
Sbjct: 63 GGFECTCEEGFEPGPMMT 80
Score = 52.2 bits (126), Expect = 2e-08
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1277 ININECYSNPCRNGAKCVDGINRYSCECLPGYT--GLHCETNINECASNPCANGGVCVDL 1334
++++EC +C++ Y CEC GY G C + +EC+ G C ++
Sbjct: 3 VDMDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECV-DTDECSVGNPCGNGTCKNV 61
Query: 1335 IDGFKCECPRGY 1346
I GF+C C G+
Sbjct: 62 IGGFECTCEEGF 73
Score = 51.0 bits (123), Expect = 5e-08
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Query: 301 QDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCS-LNIDDCAGAACFNGATCID 359
D+DEC H C N+ G + C C G+ ++ D+C+ TC +
Sbjct: 3 VDMDECKEPDVCKH--GQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGNGTCKN 60
Query: 360 RVGSFYCQCTPG 371
+G F C C G
Sbjct: 61 VIGGFECTCEEG 72
Score = 50.3 bits (121), Expect = 9e-08
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 1392 DIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCE-INIDDCAFKPCRHGGTCIDLVN 1450
D+DEC G C + Y CEC GY E ++ D+C+ GTC +++
Sbjct: 4 DMDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGNGTCKNVIG 63
Query: 1451 AYKCVC 1456
++C C
Sbjct: 64 GFECTC 69
Score = 49.9 bits (120), Expect = 1e-07
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Query: 1242 DECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCE-ININECYSNPCRNGAKCVDGINRY 1300
DEC GQC + Y+C C G E ++ +EC C + I +
Sbjct: 6 DECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGNGTCKNVIGGF 65
Query: 1301 SCECLPGYTG 1310
C C G+
Sbjct: 66 ECTCEEGFEP 75
Score = 44.1 bits (105), Expect = 1e-05
Identities = 27/115 (23%), Positives = 39/115 (33%), Gaps = 40/115 (34%)
Query: 865 INIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSAN 924
+++D+C G CI+ +Y+C C Y
Sbjct: 3 VDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL-------------------------- 36
Query: 925 FQDFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRD 979
G C D DEC + +PC NG TC N G + C C +G+E
Sbjct: 37 ------------AGNEC-VDTDECSVGNPCGNG-TCKNVIGGFECTCEEGFEPGP 77
Score = 43.7 bits (104), Expect = 2e-05
Identities = 19/90 (21%), Positives = 27/90 (30%), Gaps = 17/90 (18%)
Query: 381 DACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCS-EDINECEQGINCEINIDDCAF 439
D C C GSY C C GY D +EC G
Sbjct: 6 DECKEPDVCKHGQCINTD---GSYRCECPFGYILAGNECVDTDECSVG------------ 50
Query: 440 KPCRHGGTCIDLVNAYKCVCQVPYTGHDCH 469
GTC +++ ++C C+ +
Sbjct: 51 -NPCGNGTCKNVIGGFECTCEEGFEPGPMM 79
Score = 41.4 bits (98), Expect = 1e-04
Identities = 25/110 (22%), Positives = 37/110 (33%), Gaps = 38/110 (34%)
Query: 111 EDIIECVDDPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFA 170
D+ EC + C+H G C+NT GS+
Sbjct: 3 VDMDECKEPDV----------------------------------CKH-GQCINTDGSYR 27
Query: 171 CNCTQGFTGPRCE-TNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTG 219
C C G+ E + +EC +G+C + G F C CE G+
Sbjct: 28 CECPFGYILAGNECVDTDECSVGNPCGNGTCKNVIGGFECT--CEEGFEP 75
Score = 39.9 bits (94), Expect = 4e-04
Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 12/74 (16%)
Query: 1618 HGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDKV 1677
G C + Y CEC GY G C + +C G NGTC + +
Sbjct: 15 KHGQCINTDGSYRCECPFGYILA-----------GNECV-DTDECSVGNPCGNGTCKNVI 62
Query: 1678 GGFECRCPPGFVGS 1691
GGFEC C GF
Sbjct: 63 GGFECTCEEGFEPG 76
Score = 37.2 bits (87), Expect = 0.004
Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 184 TNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYV-PCDPSPCQNGGVCRE 242
+++EC+ G C++ G++RC C GY E C G C+
Sbjct: 3 VDMDECKEPDVCKHGQCINTDGSYRCE--CPFGYILAGNECVDTDECSVGNPCGNGTCKN 60
Query: 243 LDNLNYECECQSGYRG 258
+ +EC C+ G+
Sbjct: 61 VIG-GFECTCEEGFEP 75
Score = 36.4 bits (85), Expect = 0.007
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 632 CDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADYA 691
C G C + +G YRC+CP G E +EC GTC++ I +
Sbjct: 8 CKEPDVCKHGQCINTDGS-YRCECPFGYILAGNECVDTDECSVGNPCGNGTCKNVIGGFE 66
Query: 692 CYCLP 696
C C
Sbjct: 67 CTCEE 71
Score = 36.0 bits (84), Expect = 0.009
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 59 YTCTCAPGFT--GSQCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVG 106
Y C C G+ G++C D C+ C ++ +EC C GF
Sbjct: 26 YRCECPFGYILAGNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEP 75
Score = 32.9 bits (76), Expect = 0.13
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Query: 520 DINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYM--GRHCE 558
D++EC HG C+ +Y C C GY+ G C
Sbjct: 4 DMDECKEPDVCKHGQ--CINTDGSYRCECPFGYILAGNECV 42
Score = 32.2 bits (74), Expect = 0.24
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 1662 CLPGACHNNGTCVDKVGGFECRCPPGFVGS 1691
C +G C++ G + C CP G++ +
Sbjct: 8 CKEPDVCKHGQCINTDGSYRCECPFGYILA 37
Score = 31.4 bits (72), Expect = 0.40
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Query: 514 GSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYM---GRHCE 558
G+ C D +EC +GT C ++ + C C G+ CE
Sbjct: 38 GNECV-DTDECSVGNPCGNGT--CKNVIGGFECTCEEGFEPGPMMTCE 82
Score = 30.2 bits (69), Expect = 1.2
Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 229 CDPSPCQNGGVCRELDNLNYECECQSGYRGKNCE-ENIDDCPGNLCQNGATCMDGINKYS 287
C G C D +Y CEC GY E + D+C TC + I +
Sbjct: 8 CKEPDVCKHGQCINTDG-SYRCECPFGYILAGNECVDTDECSVGNPCGNGTCKNVIGGFE 66
Query: 288 CLCLATYTGD 297
C C +
Sbjct: 67 CTCEEGFEPG 76
Score = 29.5 bits (67), Expect = 2.1
Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 5/67 (7%)
Query: 603 GVCTALDGGHTCICPDNYSGRNCEYFGYD-CDSNPCQNGGFCRSKEGGGYRCDCPPG--- 658
G C DG + C CP Y E D C G C++ GG+ C C G
Sbjct: 17 GQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGNGTCKNVI-GGFECTCEEGFEP 75
Query: 659 ATGTHCE 665
CE
Sbjct: 76 GPMMTCE 82
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor
complex, PCSK9, proprotein converta low-density
lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB:
2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A
1i0u_A 1hj7_A
Length = 107
Score = 59.7 bits (145), Expect = 8e-11
Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 6/98 (6%)
Query: 1064 GTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFT--- 1120
+ + T+ NEC + C D + C+C GF
Sbjct: 4 HHHHHPMSDYDIPTTENLYFQGAM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVA 62
Query: 1121 GTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFT 1158
+CE DIDEC +P +C +L +KC C GF
Sbjct: 63 QRRCE-DIDEC-QDPDTCSQLCVNLEGGYKCQCEEGFQ 98
Score = 59.3 bits (144), Expect = 1e-10
Identities = 29/130 (22%), Positives = 39/130 (30%), Gaps = 36/130 (27%)
Query: 956 NGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEVGDYSCLCVDGF-- 1013
H+ Y + + + T++C C D Y CLC DGF
Sbjct: 2 KHHHHHHPMSDYDIPTTENLYFQGA-MGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQL 60
Query: 1014 -SGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGS 1072
+ + CE DIDEC C CVN G
Sbjct: 61 VAQRRCE-DIDECQDP-----------------------------DTCSQ--LCVNLEGG 88
Query: 1073 FACNCTQGFT 1082
+ C C +GF
Sbjct: 89 YKCQCEEGFQ 98
Score = 53.5 bits (129), Expect = 1e-08
Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 8/99 (8%)
Query: 1252 GGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGL 1311
++ Y NEC N C D Y C C G+ +
Sbjct: 3 HHHHHHPMSDYDIPTTENLYFQGAM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLV 61
Query: 1312 ---HCETNINECASN-PCANGGVCVDLIDGFKCECPRGY 1346
CE +I+EC C+ +CV+L G+KC+C G+
Sbjct: 62 AQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQCEEGF 97
Score = 53.1 bits (128), Expect = 2e-08
Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 5/100 (5%)
Query: 1137 LNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFT 1196
+ + ++ + ++C+ + +C D GY C C GF
Sbjct: 1 MKHHHHHHPMSDYDIPTTENLYFQGAM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQ 59
Query: 1197 ---GMSCETNINDCASNPCHRGECIDGENSFTCACHPGFT 1233
CE +I++C C++ E + C C GF
Sbjct: 60 LVAQRRCE-DIDECQDPDTCSQLCVNLEGGYKCQCEEGFQ 98
Score = 52.3 bits (126), Expect = 3e-08
Identities = 25/105 (23%), Positives = 38/105 (36%), Gaps = 10/105 (9%)
Query: 1104 CLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFT---GS 1160
+ +EC N +CNDL ++C CP GF
Sbjct: 6 HHHPMSDYDIPTTENLYFQGAM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQR 64
Query: 1161 HCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFT----GMSCE 1201
C+ +ID+C P +C + GY C+C GF +C+
Sbjct: 65 RCE-DIDEC-QDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK 107
Score = 51.6 bits (124), Expect = 6e-08
Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 6/99 (6%)
Query: 1289 NGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYY- 1347
++ Y NEC N VC DL G++C CP G+
Sbjct: 2 KHHHHHHPMSDYDIPTTENLYFQGAM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQL 60
Query: 1348 --DARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGY 1384
RC D+DEC DP C + + C C+ G+
Sbjct: 61 VAQRRC-EDIDEC-QDPDTCSQLCVNLEGGYKCQCEEGF 97
Score = 49.6 bits (119), Expect = 3e-07
Identities = 23/98 (23%), Positives = 34/98 (34%), Gaps = 6/98 (6%)
Query: 1215 GECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPG---TS 1271
+ + +EC N C DL GY+C C G +
Sbjct: 4 HHHHHPMSDYDIPTTENLYFQGA-MGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVA 62
Query: 1272 GTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYT 1309
CE +I+EC +P CV+ Y C+C G+
Sbjct: 63 QRRCE-DIDEC-QDPDTCSQLCVNLEGGYKCQCEEGFQ 98
Score = 47.7 bits (114), Expect = 1e-06
Identities = 23/102 (22%), Positives = 34/102 (33%), Gaps = 9/102 (8%)
Query: 878 GGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQDFACHCGVGWT 937
++ Y + C+ N C + C C G+
Sbjct: 3 HHHHHHPMSDYDIPTTENLYFQGA-MGTNECLDNNGGCSYVCNDLKI--GYECLCPDGFQ 59
Query: 938 ---GRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYE 976
R C ED+DECQ C C N G Y C+C +G++
Sbjct: 60 LVAQRRC-EDIDECQDPDTC--SQLCVNLEGGYKCQCEEGFQ 98
Score = 47.3 bits (113), Expect = 2e-06
Identities = 22/111 (19%), Positives = 34/111 (30%), Gaps = 21/111 (18%)
Query: 353 NGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCASGY 412
+ + T + C N +C+ Y C C G+
Sbjct: 2 KHHHHHHPMSDYDIPTTENLYFQGAMGTNECLDNNGGCSYVCNDLK---IGYECLCPDGF 58
Query: 413 KGVN---CSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQ 460
+ V C EDI+EC+ C C++L YKC C+
Sbjct: 59 QLVAQRRC-EDIDECQDPDTCS--------------QLCVNLEGGYKCQCE 94
Score = 45.4 bits (108), Expect = 9e-06
Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 8/97 (8%)
Query: 1364 LNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYT 1423
+ ++ + + +EC N +C D GY C C G+
Sbjct: 1 MKHHHHHHPMSDYDIPTTENLYFQGAM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQ 59
Query: 1424 GIN---CEINIDDCAFK-PCRHGGTCIDLVNAYKCVC 1456
+ CE +ID+C C C++L YKC C
Sbjct: 60 LVAQRRCE-DIDECQDPDTCSQ--LCVNLEGGYKCQC 93
Score = 45.0 bits (107), Expect = 1e-05
Identities = 24/113 (21%), Positives = 39/113 (34%), Gaps = 19/113 (16%)
Query: 160 GTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTG 219
+ + T+ NEC + C D + C+ C G+
Sbjct: 4 HHHHHPMSDYDIPTTENLYFQGAM-GTNECLDNNGGCSYVCNDLKIGYECL--CPDGFQL 60
Query: 220 QN---CESKYVPCDPSPCQNGGVCREL-DNLN--YECECQSGYR----GKNCE 262
CE D CQ+ C +L NL Y+C+C+ G++ K C+
Sbjct: 61 VAQRRCE------DIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK 107
Score = 44.2 bits (105), Expect = 2e-05
Identities = 18/99 (18%), Positives = 31/99 (31%), Gaps = 6/99 (6%)
Query: 275 NGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGW 334
++ Y +EC C C + G+ C+C +G+
Sbjct: 2 KHHHHHHPMSDYDIPTTENLYFQGA-MGTNECLDNNGGCSY--VCNDLKIGYECLCPDGF 58
Query: 335 T-GPDCS-LNIDDCAGAACFNGATCIDRVGSFYCQCTPG 371
+ID+C C++ G + CQC G
Sbjct: 59 QLVAQRRCEDIDECQDPDT-CSQLCVNLEGGYKCQCEEG 96
Score = 42.3 bits (100), Expect = 1e-04
Identities = 27/123 (21%), Positives = 33/123 (26%), Gaps = 40/123 (32%)
Query: 59 YTCTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFV---GQTCSEDIIE 115
Y + C + VC L+ YEC C GF + C EDI E
Sbjct: 13 YDIPTTENLYFQGAMGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRRC-EDIDE 71
Query: 116 CVDDPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQ 175
C D C CVN G + C C +
Sbjct: 72 CQD----------------------------------PDTCSQ--LCVNLEGGYKCQCEE 95
Query: 176 GFT 178
GF
Sbjct: 96 GFQ 98
Score = 41.9 bits (99), Expect = 1e-04
Identities = 16/103 (15%), Positives = 26/103 (25%), Gaps = 10/103 (9%)
Query: 315 NGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPG--- 371
+ + + ++C C D + C C G
Sbjct: 2 KHHHHHHPMSDYDIPTTENLYFQGAM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQL 60
Query: 372 KTGLLCHLEDAC-TSNPCHADAICDTNPIINGSYTCSCASGYK 413
C D C + C +C G Y C C G++
Sbjct: 61 VAQRRCEDIDECQDPDTC--SQLCVNLE---GGYKCQCEEGFQ 98
Score = 36.5 bits (85), Expect = 0.012
Identities = 24/116 (20%), Positives = 33/116 (28%), Gaps = 24/116 (20%)
Query: 601 NGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQ--NGG---FCRSKEGGGYRCDC 655
+ +N + +N C NGG C + GY C C
Sbjct: 2 KHHHHHHPMSDYDIPTTENLYFQGA------MGTNECLDNNGGCSYVCNDLK-IGYECLC 54
Query: 656 PPG---ATGTHCELDSRNEC-YSNPCQHAGTCEDRIADYACYCLP----MWNGKNC 703
P G CE +EC + C C + Y C C + K C
Sbjct: 55 PDGFQLVAQRRCE--DIDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLDPHTKAC 106
Score = 31.1 bits (71), Expect = 0.83
Identities = 21/91 (23%), Positives = 26/91 (28%), Gaps = 7/91 (7%)
Query: 18 SFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYTCTCAPGFT---GSQCEL 74
+ N C C Y C C GF +CE
Sbjct: 12 DYDIPTTENLYFQGAMG--TNECLDNNGGCSYVCN-DLKIGYECLCPDGFQLVAQRRCED 68
Query: 75 QDHCASSPCRNGAVCTSLEDTYECDCAPGFV 105
D C P +C +LE Y+C C GF
Sbjct: 69 IDEC-QDPDTCSQLCVNLEGGYKCQCEEGFQ 98
Score = 30.0 bits (68), Expect = 1.9
Identities = 27/162 (16%), Positives = 35/162 (21%), Gaps = 68/162 (41%)
Query: 401 NGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQ 460
Y NEC C + C DL Y+C+C
Sbjct: 10 MSDYDIPTTENLYFQGA-MGTNECLDNNGG-----------CSY--VCNDLKIGYECLCP 55
Query: 461 VPYTGHDCHQKLDPCVPNSACVRCLTPGMIVIRSWILVYRTERMVIDFGMKHIGSRCEGD 520
+ RCE D
Sbjct: 56 DGFQLVA----------------------------------------------QRRCE-D 68
Query: 521 INECLSNPCSSHGTLDCVQLVNNYHCNCRPGYM----GRHCE 558
I+EC S CV L Y C C G+ + C+
Sbjct: 69 IDECQDPDTCSQ---LCVNLEGGYKCQCEEGFQLDPHTKACK 107
Score = 28.4 bits (64), Expect = 8.9
Identities = 12/70 (17%), Positives = 18/70 (25%), Gaps = 14/70 (20%)
Query: 1619 GGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDKVG 1678
++ Y + +CL + C D
Sbjct: 3 HHHHHHPMSDYDIPTTENLYFQ--------------GAMGTNECLDNNGGCSYVCNDLKI 48
Query: 1679 GFECRCPPGF 1688
G+EC CP GF
Sbjct: 49 GYECLCPDGF 58
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant
complex, antifibrinolytic complex, hydrolase-hydrolase
inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP:
g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A
1adx_A 2adx_A
Length = 118
Score = 60.1 bits (146), Expect = 1e-10
Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%)
Query: 1127 DIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAG 1186
+D C C ++ C C GF + + + C +
Sbjct: 3 PVDPCFRANC-EYQCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDPNT-Q 60
Query: 1187 YTCECLAGFT---GMSCETNINDCASNPCHRGECIDGENSFTCACHPGFTGA 1235
+CEC G+ G C +I++C + G C + +F C C P A
Sbjct: 61 ASCECPEGYILDDGFICT-DIDECENGGFCSGVCHNLPGTFECICGPDSALA 111
Score = 58.5 bits (142), Expect = 3e-10
Identities = 34/145 (23%), Positives = 42/145 (28%), Gaps = 40/145 (27%)
Query: 943 EDVDECQLSSPCRNGATCHN-TNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDE 1001
E VD C + C C SYLC CA+G+ + C D
Sbjct: 2 EPVDPCF-RANCEYQ--CQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADC-DP 57
Query: 1002 VGDYSCLCVDGFS---GKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGS 1058
SC C +G+ G C DIDEC +
Sbjct: 58 NTQASCECPEGYILDDGFICT-DIDECENG-----------------------------G 87
Query: 1059 PCEHDGTCVNTPGSFACNCTQGFTG 1083
C C N PG+F C C
Sbjct: 88 FCSG--VCHNLPGTFECICGPDSAL 110
Score = 57.4 bits (139), Expect = 8e-10
Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 7/108 (6%)
Query: 1056 AGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVC 1115
+ CE+ S+ C C +GF E + + + C D C C
Sbjct: 8 FRANCEY-QCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADC-DPNTQASCEC 65
Query: 1116 MPGFT---GTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGS 1160
G+ G C DIDEC + + G+C++L TF+C C +
Sbjct: 66 PEGYILDDGFICT-DIDECENGGFCS-GVCHNLPGTFECICGPDSALA 111
Score = 56.2 bits (136), Expect = 2e-09
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 9/111 (8%)
Query: 1241 LDECASNPCQFGGQCEDLING-YQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINR 1299
+D C C+ QC+ L Y C C G + E + + + N A C
Sbjct: 4 VDPCFRANCE--YQCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDPNTQ- 60
Query: 1300 YSCECLPGYT---GLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYY 1347
SCEC GY G C +I+EC + + GVC +L F+C C
Sbjct: 61 ASCECPEGYILDDGFICT-DIDECENGGFCS-GVCHNLPGTFECICGPDSA 109
Score = 53.9 bits (130), Expect = 1e-08
Identities = 31/122 (25%), Positives = 43/122 (35%), Gaps = 15/122 (12%)
Query: 867 IDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQ 926
+D C C + +D +Y CVC + N+ A C P+
Sbjct: 4 VDPCFRANCEYQCQPLD-QTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDPNTQAS 62
Query: 927 DFACHCGVGWT---GRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYE-----GR 978
C C G+ G C D+DEC+ C CHN G++ C C G
Sbjct: 63 ---CECPEGYILDDGFIC-TDIDECENGGFC--SGVCHNLPGTFECICGPDSALAGQIGT 116
Query: 979 DC 980
DC
Sbjct: 117 DC 118
Score = 53.5 bits (129), Expect = 2e-08
Identities = 25/113 (22%), Positives = 38/113 (33%), Gaps = 7/113 (6%)
Query: 1090 VNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTF 1149
V+ C C+ D ++ CVC GF E + N C+
Sbjct: 4 VDPCFRANCEY-QCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDPNTQ-A 61
Query: 1150 KCACPIGFT---GSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMS 1199
C CP G+ G C +ID+C + G+C + + C C
Sbjct: 62 SCECPEGYILDDGFICT-DIDEC-ENGGFCSGVCHNLPGTFECICGPDSALAG 112
Score = 53.5 bits (129), Expect = 2e-08
Identities = 23/112 (20%), Positives = 35/112 (31%), Gaps = 9/112 (8%)
Query: 1317 INECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQF 1376
++ C C +D + C C G+ + + C+ Q
Sbjct: 4 VDPCFRANCEYQCQPLD-QTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDPN-TQA 61
Query: 1377 ICHCKPGY---GGKRCEFDIDECGSN-PCQHGGICTDHLNGYTCECQIGYTG 1424
C C GY G C DIDEC + C +C + + C C
Sbjct: 62 SCECPEGYILDDGFICT-DIDECENGGFCSG--VCHNLPGTFECICGPDSAL 110
Score = 52.8 bits (127), Expect = 4e-08
Identities = 27/108 (25%), Positives = 38/108 (35%), Gaps = 5/108 (4%)
Query: 1279 INECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGF 1338
++ C+ C Y C C G+ + E + + N A C
Sbjct: 4 VDPCFRANCEYQ-CQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDPNT-QA 61
Query: 1339 KCECPRGY--YDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGY 1384
CECP GY D +D+DEC + G C + F C C P
Sbjct: 62 SCECPEGYILDDGFICTDIDECE-NGGFCSGVCHNLPGTFECICGPDS 108
Score = 50.1 bits (120), Expect = 3e-07
Identities = 24/107 (22%), Positives = 35/107 (32%), Gaps = 6/107 (5%)
Query: 1166 IDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRGECIDGENSFT 1225
+D C + C Y C C GF + E + N D +
Sbjct: 4 VDPCFRANCEYQCQP-LDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDPNTQAS 62
Query: 1226 CACHPGFTGALCNT--QLDECASN-PCQFGGQCEDLINGYQCRCKPG 1269
C C G+ +DEC + C G C +L ++C C P
Sbjct: 63 CECPEGYILDDGFICTDIDECENGGFCS--GVCHNLPGTFECICGPD 107
Score = 50.1 bits (120), Expect = 3e-07
Identities = 31/111 (27%), Positives = 38/111 (34%), Gaps = 8/111 (7%)
Query: 228 PCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYS 287
PC + C+ C+ LD +Y C C G+ E + N A C S
Sbjct: 6 PCFRANCEYQ--CQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDPNTQ-AS 62
Query: 288 CLCLATYTGDLCE--QDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTG 336
C C Y D D+DEC C C N G F CIC
Sbjct: 63 CECPEGYILDDGFICTDIDECE-NGGFCS--GVCHNLPGTFECICGPDSAL 110
Score = 45.1 bits (107), Expect = 2e-05
Identities = 30/127 (23%), Positives = 41/127 (32%), Gaps = 22/127 (17%)
Query: 343 IDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHL-EDACTSNPCHADAICDTNPIIN 401
+D C A C +D S+ C C G + N A CD N
Sbjct: 4 VDPCFRANCEYQCQPLD-QTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDPN---- 58
Query: 402 GSYTCSCASGYKGVNCS--EDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVC 459
+C C GY + DI+ECE G C G C +L ++C+C
Sbjct: 59 TQASCECPEGYILDDGFICTDIDECENGGFCS--------------GVCHNLPGTFECIC 104
Query: 460 QVPYTGH 466
Sbjct: 105 GPDSALA 111
Score = 43.9 bits (104), Expect = 5e-05
Identities = 26/106 (24%), Positives = 37/106 (34%), Gaps = 7/106 (6%)
Query: 1354 DVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNG 1413
VD C C ++C C G+ E + N C D
Sbjct: 3 PVDPCFRANC-EYQCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADC-DPNTQ 60
Query: 1414 YTCECQIGYT---GINCEINIDDCAFKPCRHGGTCIDLVNAYKCVC 1456
+CEC GY G C +ID+C G C +L ++C+C
Sbjct: 61 ASCECPEGYILDDGFICT-DIDECE-NGGFCSGVCHNLPGTFECIC 104
Score = 43.1 bits (102), Expect = 6e-05
Identities = 32/141 (22%), Positives = 47/141 (33%), Gaps = 39/141 (27%)
Query: 985 DDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFI 1044
D C C+ LD Y C+C +GF+ E + N A C
Sbjct: 5 DPCFRANCEYQCQPLD-QTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADC-------- 55
Query: 1045 FFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFT---GPRCETNVNECES-HPCQN 1100
+ +C C +G+ G C +++ECE+ C
Sbjct: 56 -----------------------DPNTQASCECPEGYILDDGFICT-DIDECENGGFCS- 90
Query: 1101 DGSCLDDPGTFRCVCMPGFTG 1121
G C + PGTF C+C P
Sbjct: 91 -GVCHNLPGTFECICGPDSAL 110
Score = 42.4 bits (100), Expect = 1e-04
Identities = 27/113 (23%), Positives = 37/113 (32%), Gaps = 16/113 (14%)
Query: 152 AGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVC 211
+ CE+ S+ C C +GF E + + + C D C
Sbjct: 8 FRANCEY-QCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADC-DPNTQASCE- 64
Query: 212 MCEPGYT---GQNCESKYVPCDPSPCQNGGVCREL-DNLN--YECECQSGYRG 258
C GY G C D C+NGG C + NL +EC C
Sbjct: 65 -CPEGYILDDGFICT------DIDECENGGFCSGVCHNLPGTFECICGPDSAL 110
Score = 42.0 bits (99), Expect = 2e-04
Identities = 23/117 (19%), Positives = 34/117 (29%), Gaps = 11/117 (9%)
Query: 301 QDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDR 360
+ VD C + C + C+C G+ + A C D
Sbjct: 2 EPVDPCF--RANCEYQ-CQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADC-DP 57
Query: 361 VGSFYCQCTPGKT---GLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKG 414
C+C G G +C D C N +C P G++ C C
Sbjct: 58 NTQASCECPEGYILDDGFICTDIDEC-ENGGFCSGVCHNLP---GTFECICGPDSAL 110
Score = 35.8 bits (83), Expect = 0.027
Identities = 24/93 (25%), Positives = 34/93 (36%), Gaps = 7/93 (7%)
Query: 18 SFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYTCTCAPGFT---GSQCEL 74
S+ C C GF+ E + C F + +C C G+ G C
Sbjct: 23 SYLCVCAEGFAPIPHEP---HRCQMFCNQTACPADCDPNTQASCECPEGYILDDGFICTD 79
Query: 75 QDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQ 107
D C + +G VC +L T+EC C P
Sbjct: 80 IDECENGGFCSG-VCHNLPGTFECICGPDSALA 111
Score = 35.8 bits (83), Expect = 0.030
Identities = 18/109 (16%), Positives = 30/109 (27%), Gaps = 8/109 (7%)
Query: 76 DHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGECFNTHGSYTF 135
D C + C + +Y C CA GF + + + + +
Sbjct: 5 DPCFRANCEYQCQPLD-QTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDPNTQASC 63
Query: 136 QMIFIFFTNQYSWFL-----IAGSPCEHDGTCVNTPGSFACNCTQGFTG 179
+ + + G C C N PG+F C C
Sbjct: 64 ECPEGYILDDGFICTDIDECENGGFCSG--VCHNLPGTFECICGPDSAL 110
Score = 31.6 bits (72), Expect = 0.83
Identities = 21/102 (20%), Positives = 32/102 (31%), Gaps = 13/102 (12%)
Query: 610 GGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPG---ATGTHCEL 666
+ C+C + ++ E N C C+CP G G C
Sbjct: 22 TSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDP--NTQASCECPEGYILDDGFICT- 78
Query: 667 DSRNECYSNPCQHAGTCEDRIADYACYCLP-----MWNGKNC 703
+EC N +G C + + C C P G +C
Sbjct: 79 -DIDEC-ENGGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 118
Score = 30.4 bits (69), Expect = 2.1
Identities = 13/65 (20%), Positives = 20/65 (30%), Gaps = 4/65 (6%)
Query: 632 CDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADYA 691
C C+ C+ + Y C C G E R + + N C+ +
Sbjct: 7 CFRANCEYQ--CQPLDQTSYLCVCAEGFAPIPHEPH-RCQMFCNQTACPADCDPNT-QAS 62
Query: 692 CYCLP 696
C C
Sbjct: 63 CECPE 67
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1,
ankyrin repeat domain, transport protein; HET: ATP; 2.70A
{Rattus norvegicus} PDB: 2nyj_A*
Length = 273
Score = 63.3 bits (154), Expect = 1e-10
Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 25/142 (17%)
Query: 1797 LENTERNGSYL--CECAKGYEGRDCLI--------NTDDCASYLINADADINVP------ 1840
L +R+ L E G+ CL+ +D + L++ +
Sbjct: 33 LPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNA 92
Query: 1841 -----DNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDNFANREITDHMD 1895
G+TALH A N+ V +L+ +G + + A +
Sbjct: 93 SYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA----AANGDFFKKTKGRPGFYFG 148
Query: 1896 RLPRDVASERLHHDIVRLLDEH 1917
LP +A+ IV+ L ++
Sbjct: 149 ELPLSLAACTNQLAIVKFLLQN 170
Score = 55.6 bits (134), Expect = 4e-08
Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 5/93 (5%)
Query: 1825 DCASYLIN---ADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKAL 1881
+L+ ADI+ D+ G T LH V + N + GA L
Sbjct: 162 AIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGA--KL 219
Query: 1882 LDNFANREITDHMDRLPRDVASERLHHDIVRLL 1914
EIT+ P +A+ ++ +
Sbjct: 220 HPTLKLEEITNRKGLTPLALAASSGKIGVLAYI 252
Score = 52.9 bits (127), Expect = 4e-07
Identities = 8/41 (19%), Positives = 15/41 (36%)
Query: 1829 YLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVN 1869
L + + G T L AA+ I + +L ++
Sbjct: 218 KLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH 258
Score = 51.3 bits (123), Expect = 1e-06
Identities = 17/114 (14%), Positives = 29/114 (25%), Gaps = 27/114 (23%)
Query: 1825 DCASYLINADADINVPDNS--------------GKTALHWAAAVNNIDAVNILLSHGVNP 1870
+ L+ AD+ N G+ L AA N + V LL + P
Sbjct: 115 TLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQP 174
Query: 1871 REGSYGACKALLDNF-------ANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
A + D+ + +D + + L
Sbjct: 175 ------ADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPT 222
Score = 43.2 bits (102), Expect = 4e-04
Identities = 18/120 (15%), Positives = 30/120 (25%), Gaps = 37/120 (30%)
Query: 1835 ADINVPDNSGKTALHWAAAVNNIDAVNILL-------SHG--VNPREGSYG--------- 1876
A P + ++ A A +N + LL ++ G
Sbjct: 4 AGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAML 63
Query: 1877 --------ACKALLDNFANREITDHMDRLPRD-----------VASERLHHDIVRLLDEH 1917
LLD + +A ER + +V LL E+
Sbjct: 64 NLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVEN 123
Score = 32.1 bits (73), Expect = 1.8
Identities = 4/34 (11%), Positives = 10/34 (29%), Gaps = 7/34 (20%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNID 1858
+Y++ + H AA ++
Sbjct: 247 GVLAYILQREIH-------EPECRHAAAHHHHHH 273
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome,
connective tissue, extracellular matrix, structural
protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Length = 86
Score = 54.2 bits (131), Expect = 5e-09
Identities = 32/139 (23%), Positives = 41/139 (29%), Gaps = 63/139 (45%)
Query: 944 DVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEVG 1003
D+DEC++S C NT G + C+C +GYE
Sbjct: 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYES-------------------------- 35
Query: 1004 DYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHD 1063
K+C DIDEC +P C
Sbjct: 36 -------GFMMMKNCM-DIDECQRDPL----------------------------LCRG- 58
Query: 1064 GTCVNTPGSFACNCTQGFT 1082
G C NT GS+ C C G
Sbjct: 59 GVCHNTEGSYRCECPPGHQ 77
Score = 51.5 bits (124), Expect = 4e-08
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 302 DVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLN----IDDCA-GAACFNGAT 356
D+DEC I P +C G C N+ G F C C G+ + ID+C G
Sbjct: 2 DIDECRISPDLCGRG-QCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGV 60
Query: 357 CIDRVGSFYCQCTPG 371
C + GS+ C+C PG
Sbjct: 61 CHNTEGSYRCECPPG 75
Score = 50.8 bits (122), Expect = 6e-08
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 1088 TNVNECESHPCQ-NDGSCLDDPGTFRCVCMPGFT-----GTQCETDIDECASNPCL-NGG 1140
T+++EC P G C++ PG F C C G+ C DIDEC +P L GG
Sbjct: 1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM-DIDECQRDPLLCRGG 59
Query: 1141 ICNDLINTFKCACPIGFTGS 1160
+C++ +++C CP G S
Sbjct: 60 VCHNTEGSYRCECPPGHQLS 79
Score = 50.4 bits (121), Expect = 8e-08
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 1057 GSPCEHDGTCVNTPGSFACNCTQGFT-----GPRCETNVNECESHPCQ-NDGSCLDDPGT 1110
G CVNTPG F C C +G+ C +++EC+ P G C + G+
Sbjct: 9 SPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM-DIDECQRDPLLCRGGVCHNTEGS 67
Query: 1111 FRCVCMPGFTGTQ 1123
+RC C PG +
Sbjct: 68 YRCECPPGHQLSP 80
Score = 49.2 bits (118), Expect = 3e-07
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 1353 SDVDECASDPCLNG-GTCEDGLNQFICHCKPGY-----GGKRCEFDIDECGSNPCQ-HGG 1405
+D+DEC P L G G C + F C C GY K C DIDEC +P GG
Sbjct: 1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM-DIDECQRDPLLCRGG 59
Query: 1406 ICTDHLNGYTCECQIGYT 1423
+C + Y CEC G+
Sbjct: 60 VCHNTEGSYRCECPPGHQ 77
Score = 47.7 bits (114), Expect = 8e-07
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 1202 TNINDCASNP--CHRGECIDGENSFTCACHPGFTGALCNTQ----LDECASNPCQ-FGGQ 1254
T+I++C +P C RG+C++ F C C G+ + +DEC +P GG
Sbjct: 1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGV 60
Query: 1255 CEDLINGYQCRCKPG 1269
C + Y+C C PG
Sbjct: 61 CHNTEGSYRCECPPG 75
Score = 47.3 bits (113), Expect = 1e-06
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 1315 TNINECASNPCANG-GVCVDLIDGFKCECPRGY----YDARCLSDVDECASDPCL-NGGT 1368
T+I+EC +P G G CV+ F+C+C GY + D+DEC DP L GG
Sbjct: 1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGV 60
Query: 1369 CEDGLNQFICHCKPGY 1384
C + + C C PG+
Sbjct: 61 CHNTEGSYRCECPPGH 76
Score = 46.5 bits (111), Expect = 2e-06
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 153 GSPCEHDGTCVNTPGSFACNCTQGFT-----GPRCETNVNECESHPCQ-NDGSCLDDPGT 206
G CVNTPG F C C +G+ C +++EC+ P G C + G+
Sbjct: 9 SPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM-DIDECQRDPLLCRGGVCHNTEGS 67
Query: 207 FRCVCMCEPGYT 218
+RC C PG+
Sbjct: 68 YRCE--CPPGHQ 77
Score = 45.7 bits (109), Expect = 5e-06
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Query: 928 FACHCGVGWTGRYCN----EDVDECQLSSPCRNGATCHNTNGSYLCECAKGYE----GRD 979
F C C G+ + D+DECQ G CHNT GSY CEC G++
Sbjct: 25 FECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISA 84
Query: 980 CL 981
C+
Sbjct: 85 CI 86
Score = 45.4 bits (108), Expect = 6e-06
Identities = 21/79 (26%), Positives = 27/79 (34%), Gaps = 11/79 (13%)
Query: 261 CEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCE----QDVDECSIRPSVCHNG 316
C + D C C N + C C Y D+DEC P +C G
Sbjct: 6 CRISPDLCGRGQCVNT------PGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGG 59
Query: 317 ATCTNSVGGFSCICVNGWT 335
C N+ G + C C G
Sbjct: 60 -VCHNTEGSYRCECPPGHQ 77
Score = 45.0 bits (107), Expect = 8e-06
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 1279 INECYSNPCRNG-AKCVDGINRYSCECLPGYTGLHCE----TNINECASNPCA-NGGVCV 1332
I+EC +P G +CV+ + C+C GY +I+EC +P GGVC
Sbjct: 3 IDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCH 62
Query: 1333 DLIDGFKCECPRGYY 1347
+ ++CECP G+
Sbjct: 63 NTEGSYRCECPPGHQ 77
Score = 42.7 bits (101), Expect = 5e-05
Identities = 26/83 (31%), Positives = 32/83 (38%), Gaps = 18/83 (21%)
Query: 1126 TDIDECASNPCLNG-GICNDLINTFKCACPIGFTGSH-----------CQINIDDCVSSP 1173
TDIDEC +P L G G C + F+C C G+ CQ + C
Sbjct: 1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGV 60
Query: 1174 CHNGGICKDSIAGYTCECLAGFT 1196
CHN + Y CEC G
Sbjct: 61 CHN------TEGSYRCECPPGHQ 77
Score = 42.7 bits (101), Expect = 5e-05
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 1166 IDDCVSSP-CHNGGICKDSIAGYTCECLAGFTGMSCE----TNINDCASNP--CHRGECI 1218
ID+C SP G C ++ + C+C G+ +I++C +P C G C
Sbjct: 3 IDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCH 62
Query: 1219 DGENSFTCACHPGFTGA 1235
+ E S+ C C PG +
Sbjct: 63 NTEGSYRCECPPGHQLS 79
Score = 41.5 bits (98), Expect = 1e-04
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 1242 DECASNPCQFG-GQCEDLINGYQCRCKPG-----TSGTNCEININECYSNPCR-NGAKCV 1294
DEC +P G GQC + ++C+C G NC +I+EC +P G C
Sbjct: 4 DECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM-DIDECQRDPLLCRGGVCH 62
Query: 1295 DGINRYSCECLPGYT 1309
+ Y CEC PG+
Sbjct: 63 NTEGSYRCECPPGHQ 77
Score = 40.4 bits (95), Expect = 3e-04
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 1392 DIDECGSNPCQ-HGGICTDHLNGYTCECQIGYTGINCE----INIDDCAFKPCR-HGGTC 1445
DIDEC +P G C + + C+C GY ++ID+C P GG C
Sbjct: 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVC 61
Query: 1446 IDLVNAYKCVC 1456
+ +Y+C C
Sbjct: 62 HNTEGSYRCEC 72
Score = 39.6 bits (93), Expect = 7e-04
Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
Query: 76 DHCASSPCRNG-AVCTSLEDTYECDCAPGFVGQTCS----EDIIECVDDP--CVHGECFN 128
D C SP G C + +EC C G+ DI EC DP C G C N
Sbjct: 4 DECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHN 63
Query: 129 THGSYT 134
T GSY
Sbjct: 64 TEGSYR 69
Score = 34.2 bits (79), Expect = 0.042
Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 10/75 (13%)
Query: 1618 HGGICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICE-INVPDCLPGACHNNGTCVDK 1676
G C + + C+C GY G++ C I+ P C G C +
Sbjct: 14 GRGQCVNTPGDFECKCDEGYESGFMM--------MKNCMDIDECQRDPLLCRG-GVCHNT 64
Query: 1677 VGGFECRCPPGFVGS 1691
G + C CPPG S
Sbjct: 65 EGSYRCECPPGHQLS 79
Score = 34.2 bits (79), Expect = 0.054
Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 16/70 (22%)
Query: 402 GSYTCSCASGYKGVNCS----EDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKC 457
G + C C GY+ DI+EC++ CR G C + +Y+C
Sbjct: 23 GDFECKCDEGYESGFMMMKNCMDIDECQRDPLL-----------CRG-GVCHNTEGSYRC 70
Query: 458 VCQVPYTGHD 467
C +
Sbjct: 71 ECPPGHQLSP 80
Score = 32.3 bits (74), Expect = 0.27
Identities = 24/96 (25%), Positives = 34/96 (35%), Gaps = 29/96 (30%)
Query: 184 TNVNECESHPCQ-NDGSCLDDPGTFRCVCMCEPGYTGQN-----------CESKYVPCDP 231
T+++EC P G C++ PG F C C + GY C+ + C
Sbjct: 1 TDIDECRISPDLCGRGQCVNTPGDFECKC--DEGYESGFMMMKNCMDIDECQRDPLLCRG 58
Query: 232 SPCQN--GGVCRELDNLNYECECQSGYR----GKNC 261
C N G Y CEC G++ C
Sbjct: 59 GVCHNTEGS---------YRCECPPGHQLSPNISAC 85
Score = 31.9 bits (73), Expect = 0.34
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 9/65 (13%)
Query: 59 YTCTCAPGFTGS-----QCELQDHCASSPCR-NGAVCTSLEDTYECDCAPGFVGQTCSED 112
+ C C G+ C D C P G VC + E +Y C+C PG S +
Sbjct: 25 FECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGH---QLSPN 81
Query: 113 IIECV 117
I C+
Sbjct: 82 ISACI 86
Score = 29.6 bits (67), Expect = 2.2
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 1666 ACHNNGTCVDKVGGFECRCPPGFVGSRWTDAEC 1698
G CV+ G FEC+C G+ C
Sbjct: 11 DLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC 43
Score = 29.2 bits (66), Expect = 3.1
Identities = 15/63 (23%), Positives = 21/63 (33%), Gaps = 8/63 (12%)
Query: 649 GGYRCDCPPGATGTHCELDS---RNECYSNPCQ-HAGTCEDRIADYACYCLP----MWNG 700
G + C C G + + +EC +P G C + Y C C P N
Sbjct: 23 GDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNI 82
Query: 701 KNC 703
C
Sbjct: 83 SAC 85
Score = 29.2 bits (66), Expect = 3.2
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 520 DINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMG 554
DI+EC +P CV ++ C C GY
Sbjct: 2 DIDECRISPDLCGRG-QCVNTPGDFECKCDEGYES 35
Score = 28.4 bits (64), Expect = 4.8
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Query: 520 DINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYM----GRHC 557
DI+EC +P G + C +Y C C PG+ C
Sbjct: 45 DIDECQRDPLLCRGGV-CHNTEGSYRCECPPGHQLSPNISAC 85
>2etb_A Transient receptor potential cation channel subfamily V member 2;
TRPV2, ankyrin repeat domain, transport protein; 1.65A
{Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Length = 256
Score = 57.9 bits (140), Expect = 6e-09
Identities = 8/48 (16%), Positives = 15/48 (31%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPRE 1872
+ L + ++ G T L AA I+ +L +
Sbjct: 202 QMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGAA 249
Score = 57.9 bits (140), Expect = 7e-09
Identities = 18/132 (13%), Positives = 32/132 (24%), Gaps = 31/132 (23%)
Query: 1811 AKGYEGRDCLI-----NTDDCASYLINADADINVPDNS-------------GKTALHWAA 1852
+ Y+G L + C L+ AD+++ G+ L AA
Sbjct: 85 DEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAA 144
Query: 1853 AVNNIDAVNILLSHGVNPREGSYGACKALLDNF-------ANREITDHMDRLPRDVASER 1905
D V LL + A D+ + + +
Sbjct: 145 CTKQWDVVTYLLEN------PHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYD 198
Query: 1906 LHHDIVRLLDEH 1917
+ L
Sbjct: 199 GLLQMGARLCPT 210
Score = 56.7 bits (137), Expect = 2e-08
Identities = 28/142 (19%), Positives = 50/142 (35%), Gaps = 26/142 (18%)
Query: 1797 LENTERNGSYLCEC--AKGYEGRDCLI--------NTDDCASYLINA-----------DA 1835
LE N YL + +G G+ CL+ + C L+ +A
Sbjct: 22 LEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81
Query: 1836 DINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDNFANREITDHMD 1895
G +ALH A ++ V +L+ +G + + G ++ +
Sbjct: 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQK-----HQGTCFYFG 136
Query: 1896 RLPRDVASERLHHDIVRLLDEH 1917
LP +A+ D+V L E+
Sbjct: 137 ELPLSLAACTKQWDVVTYLLEN 158
Score = 41.3 bits (97), Expect = 0.002
Identities = 17/109 (15%), Positives = 30/109 (27%), Gaps = 37/109 (33%)
Query: 1825 DCASYLI---NADADINVPDNSGKT----------------ALHWAAAVNNIDAVNILLS 1865
D +YL+ + A + D+ G T AL + L
Sbjct: 150 DVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCP 209
Query: 1866 HGVNPREGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 1914
EI++H P +A++ +I R +
Sbjct: 210 TV------------------QLEEISNHQGLTPLKLAAKEGKIEIFRHI 240
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR
{Homo sapiens}
Length = 87
Score = 52.7 bits (127), Expect = 2e-08
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 159 DGTCVNTPGSFACNCTQGFT----GPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCE 214
C N PG F C C +G+ CE +++EC + C C++ PG + C C +
Sbjct: 15 TAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSENMCA--QLCVNYPGGYTCYCDGK 71
Query: 215 PGYT 218
G+
Sbjct: 72 KGFK 75
Score = 50.3 bits (121), Expect = 1e-07
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 13/87 (14%)
Query: 943 EDVDECQLSSPCRNGATCHNTNGSYLCECAKGYE----GRDCLINTDDCASFPCQNGGTC 998
+DVDEC L A C N G + CEC +GY + C + D+C+ C C
Sbjct: 1 KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSC-EDIDECSENMCA--QLC 57
Query: 999 LDEVGDYSCLCV--DGFS----GKHCE 1019
++ G Y+C C GF K CE
Sbjct: 58 VNYPGGYTCYCDGKKGFKLAQDQKSCE 84
Score = 49.2 bits (118), Expect = 2e-07
Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 1354 DVDECASDPCL-NGGTCEDGLNQFICHCKPGY----GGKRCEFDIDECGSNPCQHGGICT 1408
DVDEC+ P + C++ F C C GY K CE DIDEC N C +C
Sbjct: 2 DVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSENMCAQ--LCV 58
Query: 1409 DHLNGYTCEC 1418
++ GYTC C
Sbjct: 59 NYPGGYTCYC 68
Score = 48.0 bits (115), Expect = 8e-07
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 301 QDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWT----GPDCSLNIDDCAGAACFNGAT 356
+DVDECS++PS+C C N G F C C G+ C +ID+C+ C
Sbjct: 1 KDVDECSLKPSICGTA-VCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSENMC--AQL 56
Query: 357 CIDRVGSFYCQCTPGK 372
C++ G + C C K
Sbjct: 57 CVNYPGGYTCYCDGKK 72
Score = 47.7 bits (114), Expect = 8e-07
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 10/70 (14%)
Query: 1090 VNECE--SHPCQNDGSCLDDPGTFRCVCMPGFT----GTQCETDIDECASNPCLNGGICN 1143
V+EC C C + PG F C C G+ CE DIDEC+ N C +C
Sbjct: 3 VDECSLKPSICGT-AVCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSENMC--AQLCV 58
Query: 1144 DLINTFKCAC 1153
+ + C C
Sbjct: 59 NYPGGYTCYC 68
Score = 46.9 bits (112), Expect = 1e-06
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 1063 DGTCVNTPGSFACNCTQGFT----GPRCETNVNECESHPCQNDGSCLDDPGTFRCVC--M 1116
C N PG F C C +G+ CE +++EC + C C++ PG + C C
Sbjct: 15 TAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSENMCA--QLCVNYPGGYTCYCDGK 71
Query: 1117 PGFT 1120
GF
Sbjct: 72 KGFK 75
Score = 43.8 bits (104), Expect = 2e-05
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 1204 INDCASNP--CHRGECIDGENSFTCACHPGFTGALCNTQ---LDECASNPCQFGGQCEDL 1258
+++C+ P C C + F C C G+ L + +DEC+ N C C +
Sbjct: 3 VDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCA--QLCVNY 60
Query: 1259 INGYQCRCKPGT 1270
GY C C
Sbjct: 61 PGGYTCYCDGKK 72
Score = 42.6 bits (101), Expect = 4e-05
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 1127 DIDECASNPCL-NGGICNDLINTFKCACPIGFT----GSHCQINIDDCVSSPCHNGGICK 1181
D+DEC+ P + +C ++ F+C CP G+ C+ +ID+C + C +C
Sbjct: 2 DVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSENMCA--QLCV 58
Query: 1182 DSIAGYTCEC 1191
+ GYTC C
Sbjct: 59 NYPGGYTCYC 68
Score = 42.3 bits (100), Expect = 8e-05
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 1279 INECYSNP--CRNGAKCVDGINRYSCECLPGYT----GLHCETNINECASNPCANGGVCV 1332
++EC P C C + + CEC GY CE +I+EC+ N CA +CV
Sbjct: 3 VDECSLKPSICGTA-VCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSENMCA--QLCV 58
Query: 1333 DLIDGFKCEC--PRGY 1346
+ G+ C C +G+
Sbjct: 59 NYPGGYTCYCDGKKGF 74
Score = 40.3 bits (95), Expect = 3e-04
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 1166 IDDCVSSPCH-NGGICKDSIAGYTCECLAGFT----GMSCETNINDCASNPCHRGECIDG 1220
+D+C P +CK+ + CEC G+ SCE +I++C+ N C C++
Sbjct: 3 VDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSENMCA-QLCVNY 60
Query: 1221 ENSFTCAC--HPGFT 1233
+TC C GF
Sbjct: 61 PGGYTCYCDGKKGFK 75
Score = 40.3 bits (95), Expect = 4e-04
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 1392 DIDECGSNPCQ-HGGICTDHLNGYTCECQIGYT----GINCEINIDDCAFKPCRHGGTCI 1446
D+DEC P +C + + CEC GY +CE +ID+C+ C C+
Sbjct: 2 DVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSENMCAQ--LCV 58
Query: 1447 DLVNAYKCVC 1456
+ Y C C
Sbjct: 59 NYPGGYTCYC 68
Score = 39.9 bits (94), Expect = 4e-04
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 76 DHCASSP--CRNGAVCTSLEDTYECDCAPGFV----GQTCSEDIIECVDDPCVHGECFNT 129
D C+ P C VC ++ +EC+C G+ ++C EDI EC ++ C C N
Sbjct: 4 DECSLKPSICGTA-VCKNIPGDFECECPEGYRYNLKSKSC-EDIDECSENMCAQ-LCVNY 60
Query: 130 HGSYT 134
G YT
Sbjct: 61 PGGYT 65
Score = 32.6 bits (75), Expect = 0.18
Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 20/65 (30%)
Query: 402 GSYTCSCASGYK----GVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKC 457
G + C C GY+ +C EDI+EC + C C++ Y C
Sbjct: 23 GDFECECPEGYRYNLKSKSC-EDIDECSEN-------------MCAQ--LCVNYPGGYTC 66
Query: 458 VCQVP 462
C
Sbjct: 67 YCDGK 71
Score = 31.1 bits (71), Expect = 0.59
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 8/50 (16%)
Query: 649 GGYRCDCPPG----ATGTHCELDSRNECYSNPCQHAGTCEDRIADYACYC 694
G + C+CP G CE +EC N C C + Y CYC
Sbjct: 23 GDFECECPEGYRYNLKSKSCE--DIDECSENMCAQ--LCVNYPGGYTCYC 68
Score = 30.7 bits (70), Expect = 0.94
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 9/45 (20%)
Query: 520 DINECLSNP--CSSHGTLDCVQLVNNYHCNCRPGYM----GRHCE 558
D++EC P C + C + ++ C C GY + CE
Sbjct: 2 DVDECSLKPSICGTA---VCKNIPGDFECECPEGYRYNLKSKSCE 43
Score = 30.3 bits (69), Expect = 1.2
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 7/64 (10%)
Query: 59 YTCTCAPGFT----GSQCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDII 114
+ C C G+ CE D C+ + C +C + Y C C G G ++D
Sbjct: 25 FECECPEGYRYNLKSKSCEDIDECSENMC--AQLCVNYPGGYTCYC-DGKKGFKLAQDQK 81
Query: 115 ECVD 118
C
Sbjct: 82 SCEV 85
Score = 28.4 bits (64), Expect = 5.6
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 7/47 (14%)
Query: 248 YECECQSGYR----GKNCEENIDDCPGNLCQNGATCMDGINKYSCLC 290
+ECEC GYR K+CE+ ID+C N+C C++ Y+C C
Sbjct: 25 FECECPEGYRYNLKSKSCED-IDECSENMCA--QLCVNYPGGYTCYC 68
Score = 27.6 bits (62), Expect = 9.8
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 10/45 (22%)
Query: 520 DINECLSNPCSSHGTLDCVQLVNNYHCNC--RPGYM----GRHCE 558
DI+EC N C+ CV Y C C + G+ + CE
Sbjct: 44 DIDECSENMCAQL----CVNYPGGYTCYCDGKKGFKLAQDQKSCE 84
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics,
PSI, protein structure initiative; 2.80A {Legionella
pneumophila} SCOP: a.118.24.1
Length = 376
Score = 57.3 bits (138), Expect = 3e-08
Identities = 16/109 (14%), Positives = 27/109 (24%), Gaps = 20/109 (18%)
Query: 1829 YLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNP-----------------R 1871
L+ +D + V A AA ++ +N L
Sbjct: 113 LLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAE 172
Query: 1872 EGSYGACKALLDNFANREITDHMDRL---PRDVASERLHHDIVRLLDEH 1917
G L + R A R HH+++ L +
Sbjct: 173 NGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC 221
Score = 51.1 bits (122), Expect = 2e-06
Identities = 14/87 (16%), Positives = 21/87 (24%), Gaps = 21/87 (24%)
Query: 1831 INADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDNFANREI 1890
I A A L A + N A +LLS + +
Sbjct: 306 IKALAPTATIPGDANELLRLALRLGNQGACALLLSIP------------------SVLAL 347
Query: 1891 TDHMDRLPRDVASERLHHDIVRLLDEH 1917
T + D+ + EH
Sbjct: 348 T---KANNYYINETGGRLDLRAVALEH 371
Score = 35.7 bits (82), Expect = 0.15
Identities = 7/75 (9%), Positives = 15/75 (20%), Gaps = 10/75 (13%)
Query: 1840 PDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDNFANREITDHMDRLPR 1899
G L N+ ++ + + + A
Sbjct: 274 ECLQGFYMLRNLIRRNDEVLLDDI----------RFLLSIPGIKALAPTATIPGDANELL 323
Query: 1900 DVASERLHHDIVRLL 1914
+A + LL
Sbjct: 324 RLALRLGNQGACALL 338
Score = 34.2 bits (78), Expect = 0.41
Identities = 17/123 (13%), Positives = 32/123 (26%), Gaps = 29/123 (23%)
Query: 1796 SLENTERNGSYLC-ECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAAV 1854
+N E+ LC A L S V A +
Sbjct: 56 GTKNMEQVRQLLCLYYAHYNRNAKQLW------SDAHKKGIKSEVICF---VAAITGCS- 105
Query: 1855 NNIDAVNILLSHGVNPREGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 1914
+ +D + +LL+ ++ + +A+E H ++ L
Sbjct: 106 SALDTLCLLLTSD------------------EIVKVIQAENYQAFRLAAENGHLHVLNRL 147
Query: 1915 DEH 1917
E
Sbjct: 148 CEL 150
Score = 31.5 bits (71), Expect = 3.1
Identities = 4/43 (9%), Positives = 14/43 (32%), Gaps = 3/43 (6%)
Query: 1825 DCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHG 1867
+ L++ + + + + + +D + L H
Sbjct: 333 GACALLLSIPSVLALTKANN---YYINETGGRLDLRAVALEHH 372
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin
repeats, ANK repeat, ION transport, ionic channel, R
transmembrane, transport; 2.30A {Gallus gallus} PDB:
3jxj_A
Length = 260
Score = 55.9 bits (135), Expect = 3e-08
Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 15/107 (14%)
Query: 1822 NTDDCASYLINADAD-------INVPDNS----GKTALHWAAAVNNIDAVNILLSHGVNP 1870
+D L++ IN P G+TALH A V +L+ G +
Sbjct: 60 GRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV 119
Query: 1871 REGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEH 1917
+ + + LP +A+ IV L E+
Sbjct: 120 HA----QARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN 162
Score = 53.6 bits (129), Expect = 2e-07
Identities = 10/70 (14%), Positives = 19/70 (27%), Gaps = 7/70 (10%)
Query: 1811 AKGYEGRDCLINTDDCASYLINADADIN-------VPDNSGKTALHWAAAVNNIDAVNIL 1863
A R+ L+ A + + +N G + L AA I +
Sbjct: 185 AIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHI 244
Query: 1864 LSHGVNPREG 1873
+ +
Sbjct: 245 IRREIADAAA 254
Score = 52.1 bits (125), Expect = 6e-07
Identities = 11/63 (17%), Positives = 17/63 (26%), Gaps = 14/63 (22%)
Query: 1822 NTDDCASYLINADADINVPDNS--------------GKTALHWAAAVNNIDAVNILLSHG 1867
L+ AD++ G+ L AA N V+ L +G
Sbjct: 104 RCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163
Query: 1868 VNP 1870
Sbjct: 164 HKQ 166
Score = 50.2 bits (120), Expect = 2e-06
Identities = 16/105 (15%), Positives = 31/105 (29%), Gaps = 23/105 (21%)
Query: 1822 NTDDCASYLIN---ADADINVPDNSGKTALHWAAAVNN---------IDAVNILLSHGVN 1869
N YL AD+ D+ G T LH A+ + ++LL
Sbjct: 151 NQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAK 210
Query: 1870 PREGSYGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 1914
+ + ++ P +A++ I + +
Sbjct: 211 LFP-----------DTNLEALLNNDGLSPLMMAAKTGKIGIFQHI 244
Score = 49.4 bits (118), Expect = 4e-06
Identities = 22/110 (20%), Positives = 33/110 (30%), Gaps = 32/110 (29%)
Query: 1824 DDCASYLINADADINVPD----NSGKTALHWAAAVNN---IDAVNILLSHGVNPREGSYG 1876
+ S+L+ + + ++GKT L A + D + ILL
Sbjct: 22 EGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGN---- 77
Query: 1877 ACKALLDNFANREITD---------HMDRLPRDVASERLHHDIVRLLDEH 1917
+ F N D H+ A ER V LL E
Sbjct: 78 -----MREFINSPFRDVYYRGQTALHI-------AIERRCKHYVELLVEK 115
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium,
SGC, metal binding protein; 2.06A {Homo sapiens}
Length = 301
Score = 55.0 bits (132), Expect = 1e-07
Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 18/90 (20%)
Query: 1827 ASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDNFA 1886
++I ++ G TALH+AA N D + +LL A
Sbjct: 209 VDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR------------------A 250
Query: 1887 NREITDHMDRLPRDVASERLHHDIVRLLDE 1916
+ D+A ++ H + LL++
Sbjct: 251 LVGTVNEAGETALDIARKKHHKECEELLEQ 280
Score = 34.6 bits (79), Expect = 0.30
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 1819 CLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNIL 1863
L N DC L+ A + + +G+TAL A ++ + +L
Sbjct: 234 ALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELL 278
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation,
neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos
taurus}
Length = 410
Score = 54.6 bits (131), Expect = 2e-07
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 1389 CEFDIDECGSNPCQHGGICTDHLNGYTCECQI-GYTGINCEINIDDCAFKPCRHGGTCID 1447
CE C + C + G+C +G++C+C + ++G C F T
Sbjct: 181 CEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKW 240
Query: 1448 LVN 1450
N
Sbjct: 241 PPN 243
Score = 53.5 bits (128), Expect = 4e-07
Identities = 17/71 (23%), Positives = 20/71 (28%), Gaps = 1/71 (1%)
Query: 1078 TQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVC-MPGFTGTQCETDIDECASNPC 1136
G CE C+ C N G CL F C C M F+G C +
Sbjct: 173 CNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKG 232
Query: 1137 LNGGICNDLIN 1147
N
Sbjct: 233 GGQITYKWPPN 243
Score = 53.5 bits (128), Expect = 4e-07
Identities = 19/84 (22%), Positives = 28/84 (33%), Gaps = 4/84 (4%)
Query: 972 AKGYEGRDCLINTDDCASFPCQNGGTCLDEVGDYSCLCVD-GFSGKHCEVDIDECSSNPC 1030
G R C + C C N G CL + +SC C FSG C D ++
Sbjct: 173 CNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN---DPGTTYIF 229
Query: 1031 HNGATCNQFQMIFIFFTNQYSWFL 1054
G ++ + + L
Sbjct: 230 SKGGGQITYKWPPNDRPSTRADRL 253
Score = 53.1 bits (127), Expect = 6e-07
Identities = 16/68 (23%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Query: 1117 PGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPI-GFTGSHCQINIDDCVSSPCH 1175
G CE C + C N G+C + F C C + F+G C + S
Sbjct: 174 NGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGG 233
Query: 1176 NGGICKDS 1183
K
Sbjct: 234 GQITYKWP 241
Score = 52.3 bits (125), Expect = 1e-06
Identities = 16/72 (22%), Positives = 20/72 (27%), Gaps = 1/72 (1%)
Query: 174 TQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSP 233
G CE C+ C N G CL F C C ++G C S
Sbjct: 173 CNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCS-MTSFSGPLCNDPGTTYIFSK 231
Query: 234 CQNGGVCRELDN 245
+ N
Sbjct: 232 GGGQITYKWPPN 243
Score = 51.2 bits (122), Expect = 2e-06
Identities = 13/63 (20%), Positives = 16/63 (25%), Gaps = 1/63 (1%)
Query: 1351 CLSDVDECASDPCLNGGTCEDGLNQFICHCK-PGYGGKRCEFDIDECGSNPCQHGGICTD 1409
C C D C N G C + F C C + G C +
Sbjct: 181 CEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKW 240
Query: 1410 HLN 1412
N
Sbjct: 241 PPN 243
Score = 50.4 bits (120), Expect = 4e-06
Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 1268 PGTSGTNCEININECYSNPCRNGAKCVDGINRYSCEC-LPGYTGLHCETNINECASNPC 1325
G CE C + C N C+ + +SC+C + ++G C +
Sbjct: 174 NGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKG 232
Score = 49.2 bits (117), Expect = 9e-06
Identities = 14/46 (30%), Positives = 19/46 (41%)
Query: 1306 PGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARC 1351
G CE C + C+N GVC+ DGF C+C +
Sbjct: 174 NGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPL 219
Score = 48.8 bits (116), Expect = 1e-05
Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 7/95 (7%)
Query: 64 APGFTGSQCELQ-DHCASSPCRNGAVCTSLEDTYECDCA-PGFVGQTCSEDIIECVDDPC 121
G CE C C N VC D + CDC+ F G C++ +
Sbjct: 173 CNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKG 232
Query: 122 VHGECFNTH-----GSYTFQMIFIFFTNQYSWFLI 151
+ + ++ F T Q L+
Sbjct: 233 GGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLV 267
Score = 47.3 bits (112), Expect = 4e-05
Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 1156 GFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCEC-LAGFTGMSCETNINDCASNPCH 1213
G C+ C C N G+C G++C+C + F+G C +
Sbjct: 175 GQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGG 233
Score = 46.5 bits (110), Expect = 6e-05
Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 429 NCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVP-YTGHDCHQKLDPCVPNSACVRC 484
CE C C + G C+ + + C C + ++G C+ + + +
Sbjct: 180 GCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQI 236
Score = 45.0 bits (106), Expect = 2e-04
Identities = 15/62 (24%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 619 NYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGA-TGTHCELDSRNECYSNPC 677
R CE C + C N G C + G+ CDC + +G C +S
Sbjct: 175 GQIERGCEGPSTTCQEDSCSNQGVCLQQ-WDGFSCDCSMTSFSGPLCNDPGTTYIFSKGG 233
Query: 678 QH 679
Sbjct: 234 GQ 235
Score = 45.0 bits (106), Expect = 2e-04
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 245 NLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLAT-YTGDLCEQDV 303
+L + +G + CE C + C N C+ + +SC C T ++G LC
Sbjct: 165 DLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPG 224
Query: 304 DEC 306
Sbjct: 225 TTY 227
Score = 45.0 bits (106), Expect = 2e-04
Identities = 9/64 (14%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Query: 864 PINIDDCAFKPCRHGGTCIDLVNAYKCVCQVP-YTGHDCHQKLDPCVPNRCQHGARCTPS 922
C C + G C+ + + C C + ++G C+ + ++
Sbjct: 182 EGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWP 241
Query: 923 ANFQ 926
N +
Sbjct: 242 PNDR 245
Score = 44.2 bits (104), Expect = 3e-04
Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 1193 AGFTGMSCETNINDCASNPC-HRGECIDGENSFTCACH-PGFTGALCNTQLDECASNPCQ 1250
G CE C + C ++G C+ + F+C C F+G LCN +
Sbjct: 174 NGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGG 233
Query: 1251 FGGQCEDLIN 1260
+ N
Sbjct: 234 GQITYKWPPN 243
Score = 43.5 bits (102), Expect = 7e-04
Identities = 15/81 (18%), Positives = 20/81 (24%), Gaps = 2/81 (2%)
Query: 935 GWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAK-GYEGRDCLINTDDCASFPCQ 993
G R C CQ C N C + C+C+ + G C
Sbjct: 175 GQIERGCEGPSTTCQ-EDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGG 233
Query: 994 NGGTCLDEVGDYSCLCVDGFS 1014
T D D +
Sbjct: 234 GQITYKWPPNDRPSTRADRLA 254
Score = 43.1 bits (101), Expect = 8e-04
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 517 CEGDINECLSNPCSSHGTLDCVQLVNNYHCNCR-PGYMGRHCE 558
CEG C + CS+ G C+Q + + C+C + G C
Sbjct: 181 CEGPSTTCQEDSCSNQGV--CLQQWDGFSCDCSMTSFSGPLCN 221
Score = 42.7 bits (100), Expect = 0.001
Identities = 14/82 (17%), Positives = 24/82 (29%), Gaps = 2/82 (2%)
Query: 1421 GYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCAKAGNH--RCDDECNTIACHFDGN 1478
G CE C C + G C+ + + C C+ C+D T G
Sbjct: 175 GQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGG 234
Query: 1479 DCSLGINPWINCTANINCWEVF 1500
+ P + + +
Sbjct: 235 QITYKWPPNDRPSTRADRLAIG 256
Score = 42.3 bits (99), Expect = 0.001
Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 154 SPCEHDGTCVNTPGSFACNCTQ-GFTGPRCETNVNECESHPCQNDGSCLDDP 204
C + G C+ F+C+C+ F+GP C + P
Sbjct: 191 DSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPP 242
Score = 42.3 bits (99), Expect = 0.001
Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 1058 SPCEHDGTCVNTPGSFACNCTQ-GFTGPRCETNVNECESHPCQNDGSCLDDP 1108
C + G C+ F+C+C+ F+GP C + P
Sbjct: 191 DSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPP 242
Score = 42.3 bits (99), Expect = 0.001
Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 3/55 (5%)
Query: 901 CHQKLDPCVPNRCQHGARCTPSANFQDFACHC-GVGWTGRYCNEDVDECQLSSPC 954
C C + C + C + F+C C ++G CN+ S
Sbjct: 181 CEGPSTTCQEDSCSNQGVCLQQWD--GFSCDCSMTSFSGPLCNDPGTTYIFSKGG 233
Score = 41.5 bits (97), Expect = 0.002
Identities = 14/46 (30%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Query: 1655 CEINVPDCLPGACHNNGTCVDKVGGFECRCP-PGFVGSRWTDAECF 1699
CE C +C N G C+ + GF C C F G D
Sbjct: 181 CEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTT 226
Score = 41.5 bits (97), Expect = 0.002
Identities = 17/61 (27%), Positives = 20/61 (32%), Gaps = 6/61 (9%)
Query: 299 CEQDVDECSIRPSVCHNGATCTNSVGGFSCICVN-GWTGPDCSLNIDDCAGAACFNGATC 357
CE C C N C GFSC C ++GP C+ D G
Sbjct: 181 CEGPSTTCQEDS--CSNQGVCLQQWDGFSCDCSMTSFSGPLCN---DPGTTYIFSKGGGQ 235
Query: 358 I 358
I
Sbjct: 236 I 236
Score = 40.4 bits (94), Expect = 0.005
Identities = 15/68 (22%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Query: 332 NGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCT-PGKTGLLCHLEDACTSNPCHA 390
NG C C +C N C+ + F C C+ +G LC+
Sbjct: 174 NGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGG 233
Query: 391 DAICDTNP 398
I P
Sbjct: 234 GQITYKWP 241
Score = 40.0 bits (93), Expect = 0.006
Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 656 PPGATGTHCELDSRNECYSNPCQHAGTCEDRIADYACYC-LPMWNGKNCD 704
G CE S C + C + G C + ++C C + ++G C+
Sbjct: 173 CNGQIERGCEGPS-TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 221
Score = 40.0 bits (93), Expect = 0.007
Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 38 NSCDSFPCMNGGTCTLKSLDRYTCTCA-PGFTGSQCELQDHCASSPCRNGAVC 89
+C C N G C + D ++C C+ F+G C G +
Sbjct: 186 TTCQEDSCSNQGVCL-QQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQIT 237
Score = 31.9 bits (72), Expect = 2.0
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 600 WNGGVCTALDGGHTCICPD-NYSGRNCEYFGYDCDSNPCQN 639
N GVC G +C C ++SG C G +
Sbjct: 194 SNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGG 234
Score = 31.1 bits (70), Expect = 3.7
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 1617 QHGGICTDHLNGYTCECQIGYTGG 1640
+ G+C +G++C+C + G
Sbjct: 194 SNQGVCLQQWDGFSCDCSMTSFSG 217
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats,
metal binding protein; 2.10A {Mus musculus} SCOP:
d.211.1.1 g.45.1.1
Length = 278
Score = 53.1 bits (127), Expect = 3e-07
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 18/91 (19%)
Query: 1826 CASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDNF 1885
+L+ +++ G TALH+ +N + + +LL
Sbjct: 187 IVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGK------------------ 228
Query: 1886 ANREITDHMDRLPRDVASERLHHDIVRLLDE 1916
A+ EI + P D+A H LL +
Sbjct: 229 ASIEIANESGETPLDIAKRLKHEHCEELLTQ 259
Score = 38.1 bits (88), Expect = 0.023
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 1819 CLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILL 1864
CL + +C L+ A I + + SG+T L A + + +L
Sbjct: 213 CLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLT 258
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 52.7 bits (126), Expect = 1e-06
Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 70/195 (35%)
Query: 7 CNVRQ---SPSYSPS--FWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYTC 61
N+ + +PS +P + S PI S P + G + L Y
Sbjct: 213 LNILEWLENPSNTPDKDYLLSIPI----------------SCP-LIG----VIQLAHYVV 251
Query: 62 TC-APGFTGSQCELQDH-CASSPCRNG---AVCTSLEDTYE--CDCAP---------GFV 105
T GFT EL+ + ++ G AV + D++E G
Sbjct: 252 TAKLLGFTPG--ELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVR 309
Query: 106 GQTC-------SEDIIECVDD----PC----VHG----------ECFNTHGSYTFQMIFI 140
+ + +++ P + N+H Q + I
Sbjct: 310 CYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQ-VEI 368
Query: 141 FFTNQYSWFLIAGSP 155
N +++G P
Sbjct: 369 SLVNGAKNLVVSGPP 383
Score = 51.6 bits (123), Expect = 3e-06
Identities = 50/282 (17%), Positives = 83/282 (29%), Gaps = 94/282 (33%)
Query: 1699 FSNANEAADFLAASAAAHALSTTFP--------------IYRVRGVSSAEYPPIDSPANV 1744
F + +A F A L F +Y+ Y +
Sbjct: 137 FDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQT-------YHVLVGD--- 186
Query: 1745 KYVLMGVFLMMLVGLLLGVLVTTQRKRSHGITWFPEGFLRNNSGPRRQDDLS--LENTER 1802
L+ L L+ T F +G ++ LEN
Sbjct: 187 --------LIKFSAETLSELIRTTLDAEK---VFTQGL-----------NILEWLENPSN 224
Query: 1803 --NGSYLCECA--------------------KGY---EGRDCLINTDDCASYLINADADI 1837
+ YL G+ E R L + L+ A A I
Sbjct: 225 TPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVA-I 283
Query: 1838 NVPDNSGKTALHWAAAVNNID-AVNILLSHGVNPREGSYGAC----KALLDNFANRE-IT 1891
D+ W + ++ A+ +L GV E +Y L D+ N E +
Sbjct: 284 AETDS-------WESFFVSVRKAITVLFFIGVRCYE-AYPNTSLPPSILEDSLENNEGVP 335
Query: 1892 DHMDRLP-RDVASERLHHDIVRLLDEHIPRSPQM-VSVISNG 1931
M L ++ E++ D V + H+P Q+ +S++ NG
Sbjct: 336 SPM--LSISNLTQEQVQ-DYVNKTNSHLPAGKQVEISLV-NG 373
Score = 47.4 bits (112), Expect = 6e-05
Identities = 48/275 (17%), Positives = 87/275 (31%), Gaps = 69/275 (25%)
Query: 1562 EREPPSL-----ADGAISIIVLMDMQMFK-Q-NKVSFLRELGHELRATVRIKQEPTGHEM 1614
+++ S +G ++ + F Q N + EL +L T ++
Sbjct: 138 DKKSNSALFRAVGEGNAQLVAI-----FGGQGNTDDYFEEL-RDLYQTYH----VLVGDL 187
Query: 1615 IYQHGGICTDHLNGYTCECQIGYTGGY--IS-LNMSTSTLG----IICEINVP-DCLPGA 1666
I ++ L T + + +T G + L ++T + I+ P +
Sbjct: 188 IKFSAETLSE-LIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQL 246
Query: 1667 CHNNGTCVDKVGGFECRCPPGFVGSRWTD----------AECFSNANEAADFLAASAAAH 1716
H T K+ GF PG + S A + + F +
Sbjct: 247 AHYVVTA--KLLGF----TPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVS--VRK 298
Query: 1717 ALSTTFPIYRVRGVSSAE-YPPIDSPANV--KYVLMGVFLM--MLV--GLLLGVLVTTQR 1769
A++ F I GV E YP P ++ + + ML L +
Sbjct: 299 AITVLFFI----GVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVN 354
Query: 1770 KRSHGITWFPEGFLRNNSGPR-RQDDLSLENTERN 1803
K N+ P +Q ++SL N +N
Sbjct: 355 KT-------------NSHLPAGKQVEISLVNGAKN 376
Score = 40.0 bits (93), Expect = 0.010
Identities = 47/319 (14%), Positives = 85/319 (26%), Gaps = 117/319 (36%)
Query: 247 NYECECQ-SGYRGKNCEENIDDCPGNLCQN--GAT-CMDGI-----------------NK 285
+Y + G+ PG L GAT G+ +
Sbjct: 248 HYVVTAKLLGFT-----------PGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSV 296
Query: 286 YSCLCLATYTGDLCEQDVDECSIRPSV----CHNG---ATCTNSVGGFSCICV------- 331
+ + + G C + S+ PS+ N + S+ + V
Sbjct: 297 RKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKT 356
Query: 332 NGWTGPDCSLNIDDCAGAACFNGATCIDRV--G---SFYCQCTPGKTGLLCHLEDACTSN 386
N + I + NGA + V G S Y GL L A
Sbjct: 357 NSHLPAGKQVEI------SLVNGAKNL--VVSGPPQSLY--------GLNLTLRKAK--- 397
Query: 387 PCHADAICDTN--------PIINGSY---TCSCASGYKGVNCSEDINECEQGINCEINID 435
A + D + + + S + IN ++ +
Sbjct: 398 ---APSGLDQSRIPFSERKLKFSNRFLPVASPFHSHL--------LVPASDLINKDLVKN 446
Query: 436 DCAFKPCRHGGTCIDLVNAYKCVCQVP----YTGHDCHQKLDPCVPNSACVRCLTPGMIV 491
+ +F D+ Q+P + G D + L + C+ +
Sbjct: 447 NVSFNAK-------DI--------QIPVYDTFDGSDL-RVLSGSISERIV-DCIIRLPV- 488
Query: 492 IRSWILVYRTERM-VIDFG 509
W + + ++DFG
Sbjct: 489 --KWETTTQFKATHILDFG 505
Score = 38.1 bits (88), Expect = 0.039
Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 1704 E-AADFLAASAAAHALSTTFPIYRVRGVSSAEYPPIDSPANVKYVLMGV 1751
E AA LA+ A ++ + + RG++ P D Y ++ +
Sbjct: 1766 EYAA--LASLADVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAI 1812
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein
1; arfgap domain, zinc-binding module, GTPase activ
metal-binding, nitration; 2.30A {Homo sapiens}
Length = 368
Score = 51.3 bits (122), Expect = 2e-06
Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 18/88 (20%)
Query: 1827 ASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDNFA 1886
+L+ A++N D++G+ LH A + + + L G +
Sbjct: 251 CEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADL---------------- 294
Query: 1887 NREITDHMDRLPRDVASERLHHDIVRLL 1914
D R P +A E + DIV LL
Sbjct: 295 --GARDSEGRDPLTIAMETANADIVTLL 320
Score = 34.8 bits (79), Expect = 0.29
Identities = 13/58 (22%), Positives = 22/58 (37%)
Query: 1819 CLINTDDCASYLINADADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYG 1876
++ A + AD+ D+ G+ L A N D V +L + E + G
Sbjct: 276 TILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQG 333
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase,
hydrolase-lipid binding P complex; 3.30A {Homo sapiens}
PDB: 3p5c_L
Length = 400
Score = 50.6 bits (120), Expect = 3e-06
Identities = 21/134 (15%), Positives = 34/134 (25%), Gaps = 5/134 (3%)
Query: 156 CEHDGTCVNTPGSFACNCTQGFT--GPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMC 213
C H C + + C C GF R +++EC+ P C++ G ++C C
Sbjct: 10 CSH--VCNDLKIGYECLCPDGFQLVAQRRCEDIDECQ-DPDTCSQLCVNLEGGYKCQCEE 66
Query: 214 EPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLC 273
K V L+ +N + N
Sbjct: 67 GFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRI 126
Query: 274 QNGATCMDGINKYS 287
I
Sbjct: 127 YWSDLSQRMICSTQ 140
Score = 50.2 bits (119), Expect = 5e-06
Identities = 26/127 (20%), Positives = 39/127 (30%), Gaps = 6/127 (4%)
Query: 1318 NECASNPCANGGVCVDLIDGFKCECPRGY--YDARCLSDVDECASDPCLNGGTCEDGLNQ 1375
NEC N VC DL G++C CP G+ R D+DEC DP C +
Sbjct: 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQ-DPDTCSQLCVNLEGG 59
Query: 1376 FICHCKPG---YGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINID 1432
+ C C+ G + + + + + N
Sbjct: 60 YKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDT 119
Query: 1433 DCAFKPC 1439
+ A
Sbjct: 120 EVASNRI 126
Score = 49.8 bits (118), Expect = 7e-06
Identities = 22/130 (16%), Positives = 42/130 (32%), Gaps = 8/130 (6%)
Query: 1060 CEHDGTCVNTPGSFACNCTQGFT--GPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMP 1117
C H C + + C C GF R +++EC+ P C++ G ++C C
Sbjct: 10 CSH--VCNDLKIGYECLCPDGFQLVAQRRCEDIDECQ-DPDTCSQLCVNLEGGYKCQCEE 66
Query: 1118 GFT---GTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPC 1174
GF T+ + A N + + + + S+
Sbjct: 67 GFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRI 126
Query: 1175 HNGGICKDSI 1184
+ + + I
Sbjct: 127 YWSDLSQRMI 136
Score = 48.3 bits (114), Expect = 2e-05
Identities = 31/148 (20%), Positives = 45/148 (30%), Gaps = 11/148 (7%)
Query: 1280 NECYSNPCRNGAKCVDGINRYSCECLPGYT--GLHCETNINECASNPCANGGVCVDLIDG 1337
NEC N C D Y C C G+ +I+EC +P +CV+L G
Sbjct: 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQ-DPDTCSQLCVNLEGG 59
Query: 1338 FKCECPRGYY---DARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDID 1394
+KC+C G+ + V A N + +
Sbjct: 60 YKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDT 119
Query: 1395 ECGSNPC-----QHGGICTDHLNGYTCE 1417
E SN IC+ L+
Sbjct: 120 EVASNRIYWSDLSQRMICSTQLDRAHGV 147
Score = 47.9 bits (113), Expect = 2e-05
Identities = 26/127 (20%), Positives = 40/127 (31%), Gaps = 6/127 (4%)
Query: 1091 NECESHPCQNDGSCLDDPGTFRCVCMPGFT--GTQCETDIDECASNPCLNGGICNDLINT 1148
NEC + C D + C+C GF + DIDEC +P +C +L
Sbjct: 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQ-DPDTCSQLCVNLEGG 59
Query: 1149 FKCACPIGFT---GSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNIN 1205
+KC C GF + + N + + +
Sbjct: 60 YKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDT 119
Query: 1206 DCASNPC 1212
+ ASN
Sbjct: 120 EVASNRI 126
Score = 44.4 bits (104), Expect = 3e-04
Identities = 26/135 (19%), Positives = 42/135 (31%), Gaps = 8/135 (5%)
Query: 1394 DECGSNPCQHGGICTDHLNGYTCECQIGYTGIN--CEINIDDCAFKPCRHGGTCIDLVNA 1451
+EC N +C D GY C C G+ + +ID+C P C++L
Sbjct: 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQD-PDTCSQLCVNLEGG 59
Query: 1452 YKCVCAK-----AGNHRCDDECNTIACHFDGNDCSLGINPWINCTANINCWEVFMNGRCD 1506
YKC C + C + F + + ++ +
Sbjct: 60 YKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDT 119
Query: 1507 EVCNNPQCLFDGRDC 1521
EV +N D
Sbjct: 120 EVASNRIYWSDLSQR 134
Score = 43.7 bits (102), Expect = 5e-04
Identities = 26/128 (20%), Positives = 39/128 (30%), Gaps = 5/128 (3%)
Query: 906 DPCVPNRCQHGARCTPSANFQDFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNG 965
+ C+ N C + C G + ED+DECQ C C N G
Sbjct: 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTC--SQLCVNLEG 58
Query: 966 SYLCECAKGYEGRD---CLINTDDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDI 1022
Y C+C +G++ A N D S + ++
Sbjct: 59 GYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALD 118
Query: 1023 DECSSNPC 1030
E +SN
Sbjct: 119 TEVASNRI 126
Score = 43.7 bits (102), Expect = 6e-04
Identities = 27/163 (16%), Positives = 48/163 (29%), Gaps = 7/163 (4%)
Query: 1167 DDCVSSPCHNGGICKDSIAGYTCECLAGFTGMS--CETNINDCASNPCHRGECIDGENSF 1224
++C+ + +C D GY C C GF ++ +I++C C++ E +
Sbjct: 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGY 60
Query: 1225 TCACHPGFTGAL---CNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININE 1281
C C GF + A + + + N E
Sbjct: 61 KCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTE 120
Query: 1282 CYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNP 1324
SN I + G + +T I+ P
Sbjct: 121 VASNRIYWSDLSQRMICSTQLDRAHGVS--SYDTVISRDIQAP 161
Score = 42.1 bits (98), Expect = 0.002
Identities = 26/127 (20%), Positives = 39/127 (30%), Gaps = 6/127 (4%)
Query: 1242 DECASNPCQFGGQCEDLINGYQCRCKPG--TSGTNCEININECYSNPCRNGAKCVDGINR 1299
+EC N C DL GY+C C G +I+EC +P CV+
Sbjct: 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDEC-QDPDTCSQLCVNLEGG 59
Query: 1300 YSCECLPGYT---GLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVD 1356
Y C+C G+ + A N + ++
Sbjct: 60 YKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDT 119
Query: 1357 ECASDPC 1363
E AS+
Sbjct: 120 EVASNRI 126
Score = 39.4 bits (91), Expect = 0.010
Identities = 32/192 (16%), Positives = 46/192 (23%), Gaps = 34/192 (17%)
Query: 985 DDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFI 1044
++C C D Y CLC DGF + C + TC+Q
Sbjct: 1 NECLDNNGGCSHVCNDLKIGYECLCPDGF---QLVAQRRCEDIDECQDPDTCSQ------ 51
Query: 1045 FFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFT---GPRCETNVNECESHPCQND 1101
CVN G + C C +GF + V N
Sbjct: 52 --------------------LCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNR 91
Query: 1102 GSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSH 1161
E ASN + +I + + S
Sbjct: 92 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRA--HGVSS 149
Query: 1162 CQINIDDCVSSP 1173
I + +P
Sbjct: 150 YDTVISRDIQAP 161
Score = 37.9 bits (87), Expect = 0.032
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 76 DHCASSPCRNGAVCTSLEDTYECDCAPGFV--GQTCSEDIIECVDDPCVHGECFNTHGSY 133
+ C + VC L+ YEC C GF Q EDI EC D C N G Y
Sbjct: 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGY 60
Query: 134 T 134
Sbjct: 61 K 61
Score = 36.4 bits (83), Expect = 0.083
Identities = 20/133 (15%), Positives = 35/133 (26%), Gaps = 11/133 (8%)
Query: 187 NECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCREL--- 243
NEC + C D + C+C G ++ D CQ+ C +L
Sbjct: 1 NECLDNNGGCSHVCNDLKIGYECLC-----PDGFQLVAQRRCEDIDECQDPDTCSQLCVN 55
Query: 244 DNLNYECECQSGYR---GKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCE 300
Y+C+C+ G++ + + N S
Sbjct: 56 LEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVV 115
Query: 301 QDVDECSIRPSVC 313
E +
Sbjct: 116 ALDTEVASNRIYW 128
Score = 34.8 bits (79), Expect = 0.27
Identities = 16/130 (12%), Positives = 32/130 (24%), Gaps = 6/130 (4%)
Query: 344 DDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAICDTNPI-ING 402
++C C D + C C G L + C C + + G
Sbjct: 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQ--LVAQRRCEDIDECQDPDTCSQLCVNLEG 58
Query: 403 SYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVP 462
Y C C G++ C+ + + + + + + V
Sbjct: 59 GYKCQCEEGFQ---LDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVV 115
Query: 463 YTGHDCHQKL 472
+
Sbjct: 116 ALDTEVASNR 125
Score = 32.5 bits (73), Expect = 1.3
Identities = 26/125 (20%), Positives = 37/125 (29%), Gaps = 11/125 (8%)
Query: 598 ATWNGG---VCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSK---EGGGY 651
NGG VC L G+ C+CPD + D + CQ+ C GGY
Sbjct: 4 LDNNGGCSHVCNDLKIGYECLCPDGF---QLVAQRRCEDIDECQDPDTCSQLCVNLEGGY 60
Query: 652 RCDCPPGAT--GTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCDLYDPL 709
+C C G + + D + Y + N +N D
Sbjct: 61 KCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTE 120
Query: 710 FRGGL 714
Sbjct: 121 VASNR 125
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G,
beta-propeller, protein binding; 3.30A {Rattus
norvegicus}
Length = 386
Score = 49.8 bits (118), Expect = 6e-06
Identities = 21/132 (15%), Positives = 35/132 (26%), Gaps = 6/132 (4%)
Query: 1353 SDVDECASDPCLNGGTCEDGLNQFICHCKPGY---GGKRCEFDIDECGSNP-CQHGGICT 1408
+ + C + C+ C C GY R D++EC C CT
Sbjct: 1 TGEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQ--GCT 58
Query: 1409 DHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCAKAGNHRCDDEC 1468
+ + C C+ GY + +P ID+ +
Sbjct: 59 NSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENA 118
Query: 1469 NTIACHFDGNDC 1480
+ H
Sbjct: 119 IALDFHHRRELV 130
Score = 49.0 bits (116), Expect = 1e-05
Identities = 25/149 (16%), Positives = 39/149 (26%), Gaps = 7/149 (4%)
Query: 1088 TNVNECESHPCQNDGSCLDDPGTFRCVCMPGFT----GTQCETDIDECASNPCLNGGICN 1143
T C + C G +C C G+ G C+ D++ECA C
Sbjct: 1 TGEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQ-DVNECAEEGYC-SQGCT 58
Query: 1144 DLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETN 1203
+ F+C C G+ + + P D + E
Sbjct: 59 NSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENA 118
Query: 1204 INDCASNPCHRGECID-GENSFTCACHPG 1231
I + D + A G
Sbjct: 119 IALDFHHRRELVFWSDVTLDRILRANLNG 147
Score = 47.1 bits (111), Expect = 4e-05
Identities = 25/146 (17%), Positives = 44/146 (30%), Gaps = 5/146 (3%)
Query: 1166 IDDCVSSPCHNGGICKDSIAGYTCECLAGFT----GMSCETNINDCASNPCHRGECIDGE 1221
++C + C+ C C G+ G +C+ ++N+CA C + E
Sbjct: 3 EENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQ-DVNECAEEGYCSQGCTNSE 61
Query: 1222 NSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININE 1281
+F C C G+ P D+ R + N E I
Sbjct: 62 GAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIAL 121
Query: 1282 CYSNPCRNGAKCVDGINRYSCECLPG 1307
+ + ++R L G
Sbjct: 122 DFHHRRELVFWSDVTLDRILRANLNG 147
Score = 45.5 bits (107), Expect = 1e-04
Identities = 25/129 (19%), Positives = 38/129 (29%), Gaps = 7/129 (5%)
Query: 1315 TNINECASNPCANGGVCVDLIDGFKCECPRGYY---DARCLSDVDECASDPCLNGGTCED 1371
T C N C + +C C GY D R DV+ECA + + G C +
Sbjct: 1 TGEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQG-CTN 59
Query: 1372 GLNQFICHCKPGY---GGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCE 1428
F C C+ GY +R + + L + + N
Sbjct: 60 SEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAI 119
Query: 1429 INIDDCAFK 1437
+
Sbjct: 120 ALDFHHRRE 128
Score = 44.0 bits (103), Expect = 3e-04
Identities = 20/129 (15%), Positives = 32/129 (24%), Gaps = 7/129 (5%)
Query: 944 DVDECQLSSPCRNGATCHNTNGSYLCECAKGYE----GRDCLINTDDCASFPCQNGGTCL 999
+ C + C G+ C C GY GR C + C G C
Sbjct: 2 GEENCN-VNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQG--CT 58
Query: 1000 DEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSP 1059
+ G + C C G+ + P A + + + +
Sbjct: 59 NSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENA 118
Query: 1060 CEHDGTCVN 1068
D
Sbjct: 119 IALDFHHRR 127
Score = 44.0 bits (103), Expect = 4e-04
Identities = 22/127 (17%), Positives = 29/127 (22%), Gaps = 7/127 (5%)
Query: 1279 INECYSNPCRNGAKCVDGINRYSCECLPGYTGL---HCETNINECASNPCANGGVCVDLI 1335
C N KC C C GY ++NECA C +
Sbjct: 3 EENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYC-SQGCTNSE 61
Query: 1336 DGFKCECPRGYY---DARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFD 1392
F+C C GY D R + N L + +
Sbjct: 62 GAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIAL 121
Query: 1393 IDECGSN 1399
Sbjct: 122 DFHHRRE 128
Score = 40.5 bits (94), Expect = 0.005
Identities = 28/196 (14%), Positives = 50/196 (25%), Gaps = 39/196 (19%)
Query: 984 TDDCASFPCQNGGTCLDEVGDYSCLCVDGF----SGKHCEVDIDECSSNPCHNGATCNQF 1039
++C C G C C G+ G+ C+ D++EC+
Sbjct: 3 EENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQ-DVNECAEEG---------- 51
Query: 1040 QMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQ 1099
C C N+ G+F C C G+ + P
Sbjct: 52 -------------------YCSQ--GCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVL 90
Query: 1100 NDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTG 1159
+ +D E I + + ++ A G
Sbjct: 91 LFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRAN---LNG 147
Query: 1160 SHCQINIDDCVSSPCH 1175
S+ + + + SP
Sbjct: 148 SNVEEVVSTGLESPGG 163
Score = 40.1 bits (93), Expect = 0.006
Identities = 28/133 (21%), Positives = 39/133 (29%), Gaps = 13/133 (9%)
Query: 906 DPCVPNR--CQHGARCTPSANFQDFACHCGVGWT----GRYCNEDVDECQLSSPCRNGAT 959
+ C N C + C C G+ GR C DV+EC C G
Sbjct: 4 ENCNVNNGGCAQKCQMIRG----AVQCTCHTGYRLTEDGRTCQ-DVNECAEEGYCSQG-- 56
Query: 960 CHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCE 1019
C N+ G++ C C GYE R + P +D + E
Sbjct: 57 CTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLE 116
Query: 1020 VDIDECSSNPCHN 1032
I +
Sbjct: 117 NAIALDFHHRREL 129
Score = 39.8 bits (92), Expect = 0.009
Identities = 20/146 (13%), Positives = 40/146 (27%), Gaps = 5/146 (3%)
Query: 75 QDHCASSPCRNGAVCTSLEDTYECDCAPGFV----GQTCSEDIIECVDDPCVHGECFNTH 130
+++C + C + +C C G+ G+TC +D+ EC ++ C N+
Sbjct: 3 EENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTC-QDVNECAEEGYCSQGCTNSE 61
Query: 131 GSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECE 190
G++ + A P +T
Sbjct: 62 GAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIAL 121
Query: 191 SHPCQNDGSCLDDPGTFRCVCMCEPG 216
+ + D R + G
Sbjct: 122 DFHHRRELVFWSDVTLDRILRANLNG 147
Score = 38.6 bits (89), Expect = 0.017
Identities = 20/145 (13%), Positives = 38/145 (26%), Gaps = 4/145 (2%)
Query: 1242 DECASNPCQFGGQCEDLINGYQCRCKPG---TSGTNCEININECYSNPCRNGAKCVDGIN 1298
+ C N +C+ + QC C G T ++NEC + C +
Sbjct: 4 ENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQ-GCTNSEG 62
Query: 1299 RYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDEC 1358
+ C C GY + P +D+ + +
Sbjct: 63 AFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALD 122
Query: 1359 ASDPCLNGGTCEDGLNQFICHCKPG 1383
+ L++ + G
Sbjct: 123 FHHRRELVFWSDVTLDRILRANLNG 147
Score = 37.8 bits (87), Expect = 0.037
Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 4/73 (5%)
Query: 343 IDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTS-NPCHADAICDTNPI-I 400
++C C G+ C C G L C N C + C
Sbjct: 3 EENCNVNNGGCAQKCQMIRGAVQCTCHTGYR--LTEDGRTCQDVNECAEEGYCSQGCTNS 60
Query: 401 NGSYTCSCASGYK 413
G++ C C +GY+
Sbjct: 61 EGAFQCWCEAGYE 73
Score = 37.4 bits (86), Expect = 0.042
Identities = 18/110 (16%), Positives = 29/110 (26%), Gaps = 7/110 (6%)
Query: 184 TNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCREL 243
T C + C G + C C GY D + C G C +
Sbjct: 1 TGEENCNVNNGGCAQKCQMIRGAVQ--CTCHTGYRLTED--GRTCQDVNECAEEGYCSQG 56
Query: 244 ---DNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLC 290
++C C++GY + + A +D
Sbjct: 57 CTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRS 106
Score = 35.1 bits (80), Expect = 0.21
Identities = 24/125 (19%), Positives = 35/125 (28%), Gaps = 12/125 (9%)
Query: 598 ATWNGG---VCTALDGGHTCICPDNYSGRNCEYFGYDCDS-NPCQNGGFC---RSKEGGG 650
NGG C + G C C Y G C N C G+C + G
Sbjct: 7 NVNNGGCAQKCQMIRGAVQCTCHTGYR---LTEDGRTCQDVNECAEEGYCSQGCTNSEGA 63
Query: 651 YRCDCPPGAT--GTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCDLYDP 708
++C C G + + + + Y L + N +N D
Sbjct: 64 FQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDF 123
Query: 709 LFRGG 713
R
Sbjct: 124 HHRRE 128
Score = 34.4 bits (78), Expect = 0.34
Identities = 25/109 (22%), Positives = 32/109 (29%), Gaps = 6/109 (5%)
Query: 265 IDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCE---QDVDECSIRPSVCHNGATCTN 321
++C N C C C Y QDV+EC+ C G CTN
Sbjct: 3 EENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAE-EGYCSQG--CTN 59
Query: 322 SVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTP 370
S G F C C G+ + A ID +
Sbjct: 60 SEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEY 108
Score = 33.6 bits (76), Expect = 0.66
Identities = 25/169 (14%), Positives = 44/169 (26%), Gaps = 12/169 (7%)
Query: 867 IDDCAFKPCRHGGTCIDLVNAYKCVCQVPYT----GHDCHQKLDPCVPNRCQHGARCTPS 922
++C C + A +C C Y G C + C G +
Sbjct: 3 EENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEG 62
Query: 923 ANFQDFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLI 982
A F C C G+ D C+ P + + + Y +
Sbjct: 63 A----FQCWCEAGYEL---RPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNL 115
Query: 983 NTDDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCH 1031
F + +V L + +G + E + +P
Sbjct: 116 ENAIALDFHHRRELVFWSDVTLDRILRAN-LNGSNVEEVVSTGLESPGG 163
Score = 30.9 bits (69), Expect = 4.0
Identities = 15/68 (22%), Positives = 20/68 (29%), Gaps = 11/68 (16%)
Query: 1621 ICTDHLNGYTCECQIGYTGGYISLNMSTSTLGIICEINVPDCLPGACHNNGTCVDKVGGF 1680
C C C GY + G C+ G C C + G F
Sbjct: 16 KCQMIRGAVQCTCHTGYR---------LTEDGRTCQDVNECAEEGYCSQG--CTNSEGAF 64
Query: 1681 ECRCPPGF 1688
+C C G+
Sbjct: 65 QCWCEAGY 72
Score = 30.1 bits (67), Expect = 8.1
Identities = 10/43 (23%), Positives = 12/43 (27%), Gaps = 6/43 (13%)
Query: 520 DINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYM----GRHCE 558
C N C + C C GY GR C+
Sbjct: 2 GEENCNVNNGGCAQK--CQMIRGAVQCTCHTGYRLTEDGRTCQ 42
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial
hypercholesterolemia, cholestero metabolism, lipid
transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens}
SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1
g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A
1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Length = 699
Score = 49.8 bits (118), Expect = 8e-06
Identities = 67/417 (16%), Positives = 106/417 (25%), Gaps = 51/417 (12%)
Query: 1121 GTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGIC 1180
G +CE + +C C++ D C G S C S GG
Sbjct: 3 GDRCERNEFQCQDGKCISYKWVCD----GSAECQDGSDESQETCLSVTCKSGDFSCGGRV 58
Query: 1181 KDSI-AGYTC----ECLAGFTGMSCETNINDCASNPCHRGECIDGE-----------NSF 1224
I + C +C G C CH G+CI + S
Sbjct: 59 NRCIPQFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDGKCISRQFVCDSDRDCLDGSD 118
Query: 1225 TCACHPGFTGA---LCNTQLDECASNPCQFGGQCEDLINGYQCRCK----PGTSGTNCEI 1277
+C G CN+ C CED + + RC+ + C
Sbjct: 119 EASCPVLTCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSA 178
Query: 1278 NINECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGV------- 1330
C S C + + DG +C +C C++G
Sbjct: 179 FEFHCLSGECIHSSWRCDG----GPDCKDKSDEENCAVATCRPDEFQCSDGNCIHGSRQC 234
Query: 1331 -----CVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYG 1385
C D+ D C + +C S C+ + C+
Sbjct: 235 DREYDCKDMSDEVGCVNV----TLCEGPNKFKCHSGECITLDKVCNM----ARDCRDWSD 286
Query: 1386 GKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTC 1445
E +EC N +C D GY C C G+ + D +
Sbjct: 287 EPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQL 346
Query: 1446 IDLVNAYKCVCAKAGNHRCDDECNTIACHFDGNDCSLGINPWINCTANINCWEVFMN 1502
+ + G A + T + + + +
Sbjct: 347 CVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIP 403
Score = 43.6 bits (102), Expect = 7e-04
Identities = 72/427 (16%), Positives = 113/427 (26%), Gaps = 70/427 (16%)
Query: 969 CECAKGYEGRDCLINTDDCAS--FPCQNG-GTCLDE--VGDYSCLCVDGFSGKHCEVDID 1023
EC G + + C S F C C+ + D C +G + C
Sbjct: 29 AECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKTC 88
Query: 1024 ECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTG 1083
CH+G ++ + D GS +C G
Sbjct: 89 SQDEFRCHDGKCISRQFV--------------------CDSDRDCLDGSDEASCPVLTCG 128
Query: 1084 P---RCETNVNECESHPCQNDGSCLDDPGTFRCVCM----PGFTGTQCETDIDECASNPC 1136
P +C ++ + C ND C D + C + C C S C
Sbjct: 129 PASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSGEC 188
Query: 1137 LNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFT 1196
++ D C +C + C +G S C+
Sbjct: 189 IHSSWRCDGGPD----CKDKSDEENCAVATCRPDEFQCSDGNCIHGS---RQCDREYDCK 241
Query: 1197 GMSCETNINDCASNPCHRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCE 1256
MS E C +G N F C S C +
Sbjct: 242 DMSDEVG--------CVNVTLCEGPNKFKCH------------------SGECITLDKVC 275
Query: 1257 DLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCET- 1315
++ C+ + E NEC N C D Y C C G+ +
Sbjct: 276 NMARD----CRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRC 331
Query: 1316 NINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQ 1375
+ +P +CV+L G+KC+C G+ S L +
Sbjct: 332 EDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKM 391
Query: 1376 FICHCKP 1382
+ +
Sbjct: 392 TLDRSEY 398
Score = 42.1 bits (98), Expect = 0.002
Identities = 30/254 (11%), Positives = 63/254 (24%), Gaps = 3/254 (1%)
Query: 156 CEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEP 215
C++D C + + C + + + E H G C+ C+
Sbjct: 146 CDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHC--LSGECIHSSWRCDGGPDCKD 203
Query: 216 GYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQ- 274
+NC D C +G + E +C+ C N +
Sbjct: 204 KSDEENCAVATCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKC 263
Query: 275 NGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGW 334
+ C+ + D ++ + C + G+ C+C +G+
Sbjct: 264 HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGF 323
Query: 335 TGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAIC 394
D + + Y L H +
Sbjct: 324 QLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFT 383
Query: 395 DTNPIINGSYTCSC 408
+ + + + S
Sbjct: 384 NRHEVRKMTLDRSE 397
Score = 40.6 bits (94), Expect = 0.005
Identities = 69/400 (17%), Positives = 109/400 (27%), Gaps = 42/400 (10%)
Query: 906 DPCVPNRCQ-HGARCTPSANFQDFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTN 964
D C N Q +C D + C G C+ G
Sbjct: 4 DRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIP 63
Query: 965 GSYLC----ECAKGYEGRDCLINTDDCASFPCQNGGTC-LDEVGDYSCLCVDGFSGKHCE 1019
+ C +C G + + C T F C +G V D C+DG C
Sbjct: 64 QFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDGKCISRQFVCDSDRDCLDGSDEASCP 123
Query: 1020 VDIDECSSNPCHNGATCNQFQM------------------IFIFFTNQYSWFLIAGSPCE 1061
V +S C++ Q ++ S A
Sbjct: 124 VLTCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHC 183
Query: 1062 HDGTCVNTPGSFACN----CTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCV--- 1114
G C+ S+ C+ C C + C + G+C+ G+ +C
Sbjct: 184 LSGECI--HSSWRCDGGPDCKDKSDEENCAVATCRPDEFQCSD-GNCI--HGSRQCDREY 238
Query: 1115 -CMPGFTGTQCETDIDECASNP--CLNG-GICNDLINTFKCACPIGFTGSHCQINIDDCV 1170
C C N C +G I D + C + ++C+
Sbjct: 239 DCKDMSDEVGCVNVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKECGTNECL 298
Query: 1171 SSPCHNGGICKDSIAGYTCECLAGF--TGMSCETNINDCASNPCHRGECIDGENSFTCAC 1228
+ +C D GY C C GF +I++C C++ E + C C
Sbjct: 299 DNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQC 358
Query: 1229 HPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKP 1268
GF S F ++ R +
Sbjct: 359 EEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEY 398
Score = 32.1 bits (72), Expect = 2.4
Identities = 45/288 (15%), Positives = 65/288 (22%), Gaps = 44/288 (15%)
Query: 895 PYTGHDCHQKLDPCVPNRCQHGARCTPSANFQDFACHCGVGW--TGRYCNEDVDECQLSS 952
C+ C + C ++ C + C+ C
Sbjct: 128 GPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSGE 187
Query: 953 PCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDE-VGDYSCLCVD 1011
+ C +C + +C + T F C +G D C D
Sbjct: 188 CIHSSWRCD-----GGPDCKDKSDEENCAVATCRPDEFQCSDGNCIHGSRQCDREYDCKD 242
Query: 1012 GFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPG 1071
C N H G C+
Sbjct: 243 MSDEVGCVNVTLCEGPNKF-----------------------------KCHSGECI--TL 271
Query: 1072 SFACN----CTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETD 1127
CN C P E NEC + C D + C+C GF
Sbjct: 272 DKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRC 331
Query: 1128 IDEC-ASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPC 1174
D +P +C +L +KC C GF S
Sbjct: 332 EDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAY 379
Score = 31.3 bits (70), Expect = 3.8
Identities = 54/395 (13%), Positives = 90/395 (22%), Gaps = 37/395 (9%)
Query: 97 ECDCAPGFVGQTCSEDIIECVDDPCVHGECFNT--------------------HGSYTFQ 136
+C G + + C G N G
Sbjct: 28 SAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKT 87
Query: 137 MIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGP---RCETNVNECESHP 193
F + C D GS +C GP +C ++ +
Sbjct: 88 CSQDEFRCHDGKCISRQFVC--DSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWA 145
Query: 194 CQNDGSCLDDPGTFRCVCMCEPGY--TGQNCESKYVPCDPSPCQNGGVCRELDNLNYECE 251
C ND C D + C + C + C C + + +
Sbjct: 146 CDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSGECIHSS-----WRCDGGPD 200
Query: 252 CQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCL--CLATYTGDLCEQDVDECSIR 309
C+ +NC C +G C+ G + C C
Sbjct: 201 CKDKSDEENCAVATCRPDEFQCSDG-NCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPN 259
Query: 310 PSVCHNGATCTNS-VGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQC 368
CH+G T V + C + P ++C C D + C C
Sbjct: 260 KFKCHSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLC 319
Query: 369 TPGKTGLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGI 428
G + + + G Y C C G++ ++
Sbjct: 320 PDGFQLVAQRRCEDIDECQDPDT-CSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIA 378
Query: 429 NCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPY 463
K L+ + V +
Sbjct: 379 YLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDT 413
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG;
2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Length = 625
Score = 49.1 bits (117), Expect = 1e-05
Identities = 14/123 (11%), Positives = 30/123 (24%), Gaps = 6/123 (4%)
Query: 1123 QCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQIN-IDDCVSSPCHNGGICK 1181
+ + L+G ++ C F + D V++ H C+
Sbjct: 261 ESGLPSTRIKKSKALSGFSLQSCRHSIPVFCHSSFYHDTDFLGEELDIVAAKSHEA--CQ 318
Query: 1182 DSIAGYTCECLAGFTGMSCETNINDCASNPCHRGECIDGENSFTCACHPGFTGALCNTQL 1241
C F + + C+ +G + G +G
Sbjct: 319 KL-CTNAVRC--QFFTYTPAQASCNEGKGKCYLKLSSNGSPTKILHGRGGISGYTLRLCK 375
Query: 1242 DEC 1244
+
Sbjct: 376 MDN 378
Score = 45.2 bits (107), Expect = 2e-04
Identities = 12/132 (9%), Positives = 25/132 (18%), Gaps = 6/132 (4%)
Query: 1160 SHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRGECID 1219
S + S +G + C + F + + +
Sbjct: 260 SESGLPSTRIKKSKALSGFSLQSCRHSIPVFCHSSFYHDTDFLGEELD----IVAAKSHE 315
Query: 1220 G-ENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEIN 1278
+ T A F C + + + G SG +
Sbjct: 316 ACQKLCTNAVRCQFFTYTPAQASCNEGKGKC-YLKLSSNGSPTKILHGRGGISGYTLRLC 374
Query: 1279 INECYSNPCRNG 1290
+
Sbjct: 375 KMDNECTTKIKP 386
Score = 44.8 bits (106), Expect = 3e-04
Identities = 15/124 (12%), Positives = 28/124 (22%), Gaps = 11/124 (8%)
Query: 1351 CLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDH 1410
L+G + + + C D D G +
Sbjct: 262 SGLPSTRIKKSKALSGFSLQSCRHSIPVFCHSS-----FYHDTDFLGEELDIVAAKSHE- 315
Query: 1411 LNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCAKAGNHRCDDECNT 1470
C+ ++ + C+ A C G L + K + R T
Sbjct: 316 ----ACQ-KLCTNAVRCQFFTYTPAQASCNEGKGKCYLKLSSNGSPTKILHGRGGISGYT 370
Query: 1471 IACH 1474
+
Sbjct: 371 LRLC 374
Score = 41.8 bits (98), Expect = 0.002
Identities = 12/125 (9%), Positives = 20/125 (16%), Gaps = 11/125 (8%)
Query: 1320 CASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICH 1379
+ +G C +Y + + C+ +
Sbjct: 269 IKKSKALSGFSLQSCRHSIPVFCHSSFYHDTDFLGEELDIVA-AKSHEACQKLCTNAV-- 325
Query: 1380 CKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKPC 1439
RC+F C G G K
Sbjct: 326 --------RCQFFTYTPAQASCNEGKGKCYLKLSSNGSPTKILHGRGGISGYTLRLCKMD 377
Query: 1440 RHGGT 1444
T
Sbjct: 378 NECTT 382
Score = 41.8 bits (98), Expect = 0.003
Identities = 12/111 (10%), Positives = 24/111 (21%), Gaps = 11/111 (9%)
Query: 1389 CEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEIN-IDDCAFKPCRHGGTCID 1447
+ G + C + + D C
Sbjct: 262 SGLPSTRIKKSKALSGFSLQSCRHSIPVFCHSSFYHDTDFLGEELDIVAAKSH--EACQK 319
Query: 1448 L-VNAYKCVCAKAGNHRCDDECNTIACHFDGNDCSLGINPWINCTANINCW 1497
L NA +C +C+ C L ++ + T ++
Sbjct: 320 LCTNAVRC-------QFFTYTPAQASCNEGKGKCYLKLSSNGSPTKILHGR 363
Score = 40.2 bits (94), Expect = 0.007
Identities = 12/107 (11%), Positives = 19/107 (17%), Gaps = 13/107 (12%)
Query: 985 DDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSN-----PCHNGATCNQF 1039
+G + C F + + C T
Sbjct: 267 TRIKKSKALSGFSLQSCRHSIPVFCHSSFYHDTDFLGEELDIVAAKSHEACQKLCTNAVR 326
Query: 1040 QMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRC 1086
F + Q S C S + T+ G
Sbjct: 327 CQFFTYTPAQAS--------CNEGKGKCYLKLSSNGSPTKILHGRGG 365
Score = 37.1 bits (86), Expect = 0.060
Identities = 11/120 (9%), Positives = 19/120 (15%), Gaps = 11/120 (9%)
Query: 76 DHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGEC--------- 126
S +G S + C F T + H C
Sbjct: 267 TRIKKSKALSGFSLQSCRHSIPVFCHSSFYHDTDFLGEELDIVAAKSHEACQKLCTNAVR 326
Query: 127 --FNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCET 184
F T+ G + + + +
Sbjct: 327 CQFFTYTPAQASCNEGKGKCYLKLSSNGSPTKILHGRGGISGYTLRLCKMDNECTTKIKP 386
Score = 36.4 bits (84), Expect = 0.096
Identities = 10/117 (8%), Positives = 24/117 (20%), Gaps = 10/117 (8%)
Query: 266 DDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPS-------VCHNGAT 318
+ +G + + C +++ D + + +C N
Sbjct: 267 TRIKKSKALSGFSLQSCRHSIPVFCHSSFYHDTDFLGEELDIVAAKSHEACQKLCTNAVR 326
Query: 319 CT-NSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTG 374
C + C G C L + + +
Sbjct: 327 CQFFTYTPAQASCNEG--KGKCYLKLSSNGSPTKILHGRGGISGYTLRLCKMDNECT 381
Score = 36.4 bits (84), Expect = 0.11
Identities = 12/145 (8%), Positives = 27/145 (18%), Gaps = 12/145 (8%)
Query: 1262 YQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECA 1321
+ G T + + +G + C +
Sbjct: 256 LLKTSESGLPSTRIK-------KSKALSGFSLQSCRHSIPVFCHSSFYHDTDFLGEELDI 308
Query: 1322 SNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCK 1381
++ + +C ++ C +G I H +
Sbjct: 309 VAAKSHEACQKLCTNAVRC----QFFTYTPAQASCNEGKGKCYL-KLSSNGSPTKILHGR 363
Query: 1382 PGYGGKRCEFDIDECGSNPCQHGGI 1406
G G + I
Sbjct: 364 GGISGYTLRLCKMDNECTTKIKPRI 388
Score = 32.9 bits (75), Expect = 1.1
Identities = 19/164 (11%), Positives = 39/164 (23%), Gaps = 36/164 (21%)
Query: 624 NCEYFGYDCDSNPCQNG-GFCRSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGT 682
C +F + P ++ C K G T + + +
Sbjct: 235 GCLFFTFFSQEWPKESQRNLCLLK-------TSESGLPSTRIK--------KSKALSGFS 279
Query: 683 CEDRIADYACYCLPMWNGKNCDLYDPLFRGGLGRDTKKQITSLSGFDFELEKEMEKCKQN 742
+ +C + L + L D K E C++
Sbjct: 280 LQSCRHSIPVFCHSSFYHDTDFLGEEL-------------------DIVAAKSHEACQK- 319
Query: 743 NCRAKAGNHRCDDECNTIACHFDGNDCSLGINPWINCTANINCW 786
C +C+ C L ++ + T ++
Sbjct: 320 LCTNAVRCQFFTYTPAQASCNEGKGKCYLKLSSNGSPTKILHGR 363
Score = 31.4 bits (71), Expect = 4.0
Identities = 18/116 (15%), Positives = 27/116 (23%), Gaps = 11/116 (9%)
Query: 868 DDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGA---RCTPSAN 924
G + ++ C + + + H A CT +
Sbjct: 267 TRIKKSKALSGFSLQSCRHSIPVFCHSSFYHDTDFLGEELDIVAAKSHEACQKLCTNAVR 326
Query: 925 FQDFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDC 980
Q F CNE +C L T + GY R C
Sbjct: 327 CQFFTYTP----AQASCNEGKGKCYLKLSS----NGSPTKILHGRGGISGYTLRLC 374
Score = 31.0 bits (70), Expect = 4.6
Identities = 14/124 (11%), Positives = 25/124 (20%), Gaps = 23/124 (18%)
Query: 5 GTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYTCTCA 64
C ++ S S PS ++G + C
Sbjct: 253 NLCLLKTSESGLPS-------------------TRIKKSKALSGFSL-QSCRHSIPVFCH 292
Query: 65 PGFTGSQCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHG 124
F L + ++ C + F T ++ C
Sbjct: 293 SSFYHDTDFLGEELDIVAAKSHEAC---QKLCTNAVRCQFFTYTPAQASCNEGKGKCYLK 349
Query: 125 ECFN 128
N
Sbjct: 350 LSSN 353
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL
SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Length = 791
Score = 48.9 bits (116), Expect = 2e-05
Identities = 54/383 (14%), Positives = 81/383 (21%), Gaps = 81/383 (21%)
Query: 868 DDCAFKPCRHGGTCIDLV-NAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQ 926
D C C C+ Y +G CQ +P A+
Sbjct: 155 DYCDILECEE--ECMHCSGENYDGKISKTMSGL------------ECQAWDSQSPHAHGY 200
Query: 927 DFACHCGVGWTGRYC-NEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTD 985
+ YC N D + C T+ + C I
Sbjct: 201 IPSKFPNKNLKKNYCRNPDREL---------RPWCFTTDPNK--------RWELCDIPRC 243
Query: 986 DCASFPCQNGGTCLDEVG-DYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFI 1044
CL G +Y SG C+ +
Sbjct: 244 TTPPPSSGPTYQCLKGTGENYRGNVAVTVSGHTCQHWSAQTPHTHNRTPEN--------- 294
Query: 1045 FFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSC 1104
F + C G P C T ++ C+
Sbjct: 295 --------FPCKNLDENY------------CRNPDGKRAPWCHTTNSQVRWEYCKIP--- 331
Query: 1105 LDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQI 1164
C P T T E + + +++ TG CQ
Sbjct: 332 -------SCDSSPVSTEQLAPTAPPEL---TPVVQDCYHGDGQSYRGTSSTTTTGKKCQS 381
Query: 1165 NIDDCVSSPCHNGGICKDSIAGYT---CECLAGFTGMSCETNINDCASNPCHRGECIDGE 1221
++ H AG T C G C T C+ +C E
Sbjct: 382 --WSSMTPHRHQKTPENYPNAGLTMNYCRNPDADKGPWCFTTDPSVRWEYCNLKKCSGTE 439
Query: 1222 NSFTCACHPGFTGALCNTQLDEC 1244
S + ++C
Sbjct: 440 ASVVAPPPVVLLPDVETPSEEDC 462
Score = 39.6 bits (92), Expect = 0.012
Identities = 33/247 (13%), Positives = 50/247 (20%), Gaps = 30/247 (12%)
Query: 1217 CIDGENSFTCA-CHPGFTGALCNTQLDECASNPCQFGGQC-EDLINGYQCRCKPGTSGTN 1274
D E C P LC+ QC + Y+ SG
Sbjct: 217 NPDRELRPWCFTTDPNKRWELCDIPRCTTPPPSSGPTYQCLKGTGENYRGNVAVTVSGHT 276
Query: 1275 CEININECYSNPCRNGAKCVD-GINRYSCECLPGYTGLHCETNIN-----ECASNPCANG 1328
C+ + R ++ C G C T + C C +
Sbjct: 277 CQHWSAQTPHTHNRTPENFPCKNLDENYCRNPDGKRAPWCHTTNSQVRWEYCKIPSCDSS 336
Query: 1329 GVCVDLID--GFKCECPRGYYDARCLSDVDECASDPCLNGGTCED--------------- 1371
V + + P S G C+
Sbjct: 337 PVSTEQLAPTAPPELTPVVQDCYHGDGQSYRGTSSTTTTGKKCQSWSSMTPHRHQKTPEN 396
Query: 1372 ----GLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINC 1427
GL C G C C + C+ +
Sbjct: 397 YPNAGLTMNYCRNPDADKGPWCFTTDPSVRWEYC-NLKKCSGTEASVVAPPPVVLLPDVE 455
Query: 1428 EINIDDC 1434
+ +DC
Sbjct: 456 TPSEEDC 462
Score = 36.6 bits (84), Expect = 0.10
Identities = 41/316 (12%), Positives = 68/316 (21%), Gaps = 52/316 (16%)
Query: 1148 TFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGY----TCECLAGFTGMSCET- 1202
+ +G CQ SP +G I C C T
Sbjct: 173 NYDGKISKTMSGLECQ---AWDSQSPHAHGYIPSKFPNKNLKKNYCRNPDRELRPWCFTT 229
Query: 1203 ---------NINDCASNPC---HRGECIDGE-NSFTCACHPGFTGALCNTQLDECASNPC 1249
+I C + P +C+ G ++ +G C +
Sbjct: 230 DPNKRWELCDIPRCTTPPPSSGPTYQCLKGTGENYRGNVAVTVSGHTCQHWSAQTPHTHN 289
Query: 1250 QFGGQCED-LINGYQCRCKPGTSGTNC----------EININECYSNPCRNGAKCVDGIN 1298
+ ++ CR G C I C S+P
Sbjct: 290 RTPENFPCKNLDENYCRNPDGKRAPWCHTTNSQVRWEYCKIPSCDSSPVSTEQLAPTAPP 349
Query: 1299 RYSCECLPGYTGL----HCETNI----NECASNPCA---------NGGVCVDLIDGFKCE 1341
+ Y G ++ +C S L + C
Sbjct: 350 ELTPVVQDCYHGDGQSYRGTSSTTTTGKKCQSWSSMTPHRHQKTPENYPNAGLTMNY-CR 408
Query: 1342 CPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGS-NP 1400
P C + + C N C + ++C N
Sbjct: 409 NPDADKGPWCFTTDPSVRWEYC-NLKKCSGTEASVVAPPPVVLLPDVETPSEEDCMFGNG 467
Query: 1401 CQHGGICTDHLNGYTC 1416
+ G + G C
Sbjct: 468 KGYRGKRATTVTGTPC 483
Score = 35.8 bits (82), Expect = 0.18
Identities = 38/270 (14%), Positives = 65/270 (24%), Gaps = 19/270 (7%)
Query: 3 NGGTCNVRQSPSYSPSFWCSCPIGFSA-SLCEIPVANSCDSFPCMNGGTCTLKSLDRYTC 61
N ++P WC LC+IP + C + + Y
Sbjct: 208 KNLKKNYCRNPDRELRPWCFTTDPNKRWELCDIP-RCTTPPPSSGPTYQCLKGTGENYRG 266
Query: 62 TCAPGFTGSQCEL-QDHCASSPCRNG--AVCTSLEDTYECDCAPGFVGQTCSEDIIECVD 118
A +G C+ + R C +L++ Y C G C +
Sbjct: 267 NVAVTVSGHTCQHWSAQTPHTHNRTPENFPCKNLDENY-CRNPDGKRAPWCHTTNSQVRW 325
Query: 119 DPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFT 178
+ C C ++ S S+ + T
Sbjct: 326 EYCKIPSCDSSPVSTEQLAPTAPPE----------LTPVVQDCYHGDGQSYRGTSSTTTT 375
Query: 179 GPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGG 238
G +C+ + + H Q + G C G C + P N
Sbjct: 376 GKKCQ-SWSSMTPHRHQKTPENYPNAGLTMNYCRNPDADKGPWCFTT-DPSVRWEYCNLK 433
Query: 239 VCRELDNLNYECECQSGYRGKNCEENIDDC 268
C + + +DC
Sbjct: 434 KCSG-TEASVVAPPPVVLLPDVETPSEEDC 462
Score = 34.6 bits (79), Expect = 0.42
Identities = 37/324 (11%), Positives = 72/324 (22%), Gaps = 48/324 (14%)
Query: 144 NQYSWFLIAGSPCEHDGTCVNTPG-SFACNCTQGFTGPRCET----NVNECESHPCQNDG 198
+ + CE + C++ G ++ ++ +G C+ + + P +
Sbjct: 150 PEKRYDYCDILECEEE--CMHCSGENYDGKISKTMSGLECQAWDSQSPHAHGYIPSKFPN 207
Query: 199 SCLDDP------GTFRCVCM-CEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECE 251
L R C +P + C+ P C + NY
Sbjct: 208 KNLKKNYCRNPDRELRPWCFTTDPNKRWELCDIPRCTTPPPSSGPTYQCLKGTGENYRGN 267
Query: 252 CQSGYRGKNCEENIDDCPGNLCQNGATCMD-GINKYSCLCLATYTGDLC-----EQDVDE 305
G C+ P + +++ C C + +
Sbjct: 268 VAVTVSGHTCQHWSAQTPHTHNRTPENFPCKNLDENYCRNPDGKRAPWCHTTNSQVRWEY 327
Query: 306 CSIRP---SVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCID--- 359
C I S + + + + + G S + G C
Sbjct: 328 CKIPSCDSSPVSTEQLAPTAPPELTPVVQDCYHGDGQSYR---GTSSTTTTGKKCQSWSS 384
Query: 360 ----------------RVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAICDTNPIINGS 403
+ YC+ G C D C S
Sbjct: 385 MTPHRHQKTPENYPNAGLTMNYCRNPDADKGPWCFTTDPSVRWEYCNLKKCSGTE---AS 441
Query: 404 YTCSCASGYKGVNCSEDINECEQG 427
+ +C G
Sbjct: 442 VVAPPPVVLLPDVETPSEEDCMFG 465
Score = 33.1 bits (75), Expect = 1.1
Identities = 12/85 (14%), Positives = 20/85 (23%), Gaps = 4/85 (4%)
Query: 614 CICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHC----ELDSR 669
SG C+++ + K C P G C
Sbjct: 266 GNVAVTVSGHTCQHWSAQTPHTHNRTPENFPCKNLDENYCRNPDGKRAPWCHTTNSQVRW 325
Query: 670 NECYSNPCQHAGTCEDRIADYACYC 694
C C + +++A A
Sbjct: 326 EYCKIPSCDSSPVSTEQLAPTAPPE 350
Score = 31.9 bits (72), Expect = 2.3
Identities = 43/343 (12%), Positives = 70/343 (20%), Gaps = 45/343 (13%)
Query: 38 NSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTYE 97
+ CD C C S + Y + +G +C Q + SP +G
Sbjct: 155 DYCDILECEE--ECMHCSGENYDGKISKTMSGLEC--QAWDSQSPHAHG-------YIPS 203
Query: 98 CDCAPGFVGQTCSEDIIECVDDPCVHGE--CFNTHGSYTFQMIFIFFTNQYSWFLIAGSP 155
C +P CF T + +++ I
Sbjct: 204 KFPNKNLKKNYCR--------NPDRELRPWCFTTDPNKRWELCDIPRCTT------PPPS 249
Query: 156 CEHDGTCVNTPG-SFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCE 214
C+ G ++ N +G C+ + + C
Sbjct: 250 SGPTYQCLKGTGENYRGNVAVTVSGHTCQHWSAQTPHTHNRT-PENFPCKNLDENYCRNP 308
Query: 215 PGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQ 274
G C + C+ C+ + P
Sbjct: 309 DGKRAPWCHTTNSQVRWEYCKIPS-----------CDSSPVSTEQLAPTA---PPELTPV 354
Query: 275 NGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGW 334
Y T TG C+ R + C +
Sbjct: 355 VQDCYHGDGQSYRGTSSTTTTGKKCQSWSSMTPHRHQKTPENYPNAGLTMNY-CRNPDAD 413
Query: 335 TGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLC 377
GP C C N C S +
Sbjct: 414 KGPWCFTTDPSVRWEYC-NLKKCSGTEASVVAPPPVVLLPDVE 455
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein
3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers,
alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB:
3lvr_E*
Length = 497
Score = 48.4 bits (115), Expect = 2e-05
Identities = 16/86 (18%), Positives = 28/86 (32%), Gaps = 18/86 (20%)
Query: 1835 ADINVPDNSGKTALHWAAAVNNIDAVNILLSHGVNPREGSYGACKALLDNFANREITDHM 1894
++ G TALH+AA N D + +LL +
Sbjct: 198 GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALV------------------GTVNEA 239
Query: 1895 DRLPRDVASERLHHDIVRLLDEHIPR 1920
D+A ++ H + LL++
Sbjct: 240 GETALDIARKKHHKECEELLEQAQAG 265
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB:
1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Length = 53
Score = 41.7 bits (98), Expect = 4e-05
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 1357 ECASDPCLNGGTCE--DGLNQFICHCKPGYGGKRCEF 1391
CLNGG C + L+ + C+C GY G RC+
Sbjct: 8 SSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44
Score = 39.0 bits (91), Expect = 4e-04
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 44 PCMNGGTCT-LKSLDRYTCTCAPGFTGSQCELQD 76
C+NGG C ++SLD YTC C G++G +C+ +D
Sbjct: 13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRD 46
Score = 37.9 bits (88), Expect = 0.001
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 1280 NECYSNPCRNGAKC--VDGINRYSCECLPGYTGLHCET 1315
Y C NG C ++ ++ Y+C C+ GY+G C+T
Sbjct: 7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44
Score = 37.9 bits (88), Expect = 0.001
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 221 NCESKYVPCDPSPCQNGGVCRELDNLN-YECECQSGYRGKNCEE 263
N C NGGVC +++L+ Y C C GY G C+
Sbjct: 1 NSYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44
Score = 37.1 bits (86), Expect = 0.002
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 1130 ECASNPCLNGGICNDL--INTFKCACPIGFTGSHCQ 1163
CLNGG+C + ++++ C C IG++G CQ
Sbjct: 8 SSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ 43
Score = 36.7 bits (85), Expect = 0.003
Identities = 10/39 (25%), Positives = 15/39 (38%)
Query: 187 NECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESK 225
C N G C+ C C GY+G C+++
Sbjct: 7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTR 45
Score = 36.3 bits (84), Expect = 0.004
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 1395 ECGSNPCQHGGICTDH--LNGYTCECQIGYTGINCE 1428
C +GG+C L+ YTC C IGY+G C+
Sbjct: 8 SSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ 43
Score = 35.9 bits (83), Expect = 0.005
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 986 DCASFPCQNGGTC--LDEVGDYSCLCVDGFSGKHCE 1019
C NGG C ++ + Y+C CV G+SG C+
Sbjct: 8 SSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ 43
Score = 34.8 bits (80), Expect = 0.012
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 154 SPCEHDGTCVNTPG--SFACNCTQGFTGPRCET 184
C + G C++ S+ CNC G++G RC+T
Sbjct: 12 GYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44
Score = 34.8 bits (80), Expect = 0.012
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 1058 SPCEHDGTCVNTPG--SFACNCTQGFTGPRCET 1088
C + G C++ S+ CNC G++G RC+T
Sbjct: 12 GYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44
Score = 34.4 bits (79), Expect = 0.020
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1091 NECESHPCQNDGSC--LDDPGTFRCVCMPGFTGTQCET 1126
C N G C ++ ++ C C+ G++G +C+T
Sbjct: 7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44
Score = 33.2 bits (76), Expect = 0.055
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 1660 PDCLPGACHNNGTC--VDKVGGFECRCPPGFVGSR 1692
P G C N G C ++ + + C C G+ G R
Sbjct: 7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDR 41
Score = 32.9 bits (75), Expect = 0.077
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 1168 DCVSSPCHNGGICK--DSIAGYTCECLAGFTGMSCET 1202
C NGG+C +S+ YTC C+ G++G C+T
Sbjct: 8 SSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44
Score = 32.5 bits (74), Expect = 0.088
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 522 NECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDL 562
C + G ++ +++Y CNC GY G C+ +DL
Sbjct: 7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRDL 47
Score = 32.5 bits (74), Expect = 0.10
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 631 DCDSNPCQNGGFCR-SKEGGGYRCDCPPGATGTHCE 665
C NGG C + Y C+C G +G C+
Sbjct: 8 SSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ 43
Score = 32.5 bits (74), Expect = 0.10
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 1318 NECASNPCANGGVCVDL--IDGFKCECPRGYYDARC 1351
C NGGVC+ + +D + C C GY RC
Sbjct: 7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRC 42
Score = 30.6 bits (69), Expect = 0.39
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 78 CASSPCRNGAVCTSLE--DTYECDCAPGFVGQTC 109
C NG VC +E D+Y C+C G+ G C
Sbjct: 9 SYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRC 42
Score = 30.2 bits (68), Expect = 0.56
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 260 NCEENIDDCPGNLCQNGATCM--DGINKYSCLCLATYTGDLCE 300
N C NG CM + ++ Y+C C+ Y+GD C+
Sbjct: 1 NSYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ 43
Score = 29.0 bits (65), Expect = 1.5
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 441 PCRHGGTCIDL--VNAYKCVCQVPYTGHDC 468
C +GG C+ + +++Y C C + Y+G C
Sbjct: 13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRC 42
Score = 29.0 bits (65), Expect = 1.5
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 874 PCRHGGTCIDL--VNAYKCVCQVPYTGHDC 901
C +GG C+ + +++Y C C + Y+G C
Sbjct: 13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRC 42
Score = 28.6 bits (64), Expect = 2.0
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 601 NGGVCTALDG--GHTCICPDNYSGRNCEY 627
NGGVC ++ +TC C YSG C+
Sbjct: 16 NGGVCMHIESLDSYTCNCVIGYSGDRCQT 44
Score = 28.6 bits (64), Expect = 2.2
Identities = 12/35 (34%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 948 CQLSSPCRNGATC--HNTNGSYLCECAKGYEGRDC 980
C NG C + SY C C GY G C
Sbjct: 8 SSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRC 42
Score = 27.9 bits (62), Expect = 3.6
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 1243 ECASNPCQFGGQCEDL--INGYQCRCKPGTSGTNCE 1276
C GG C + ++ Y C C G SG C+
Sbjct: 8 SSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ 43
Score = 27.5 bits (61), Expect = 4.9
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 1199 SCETNINDCASNPC-HRGEC--IDGENSFTCACHPGFTGALC 1237
+ C + G C I+ +S+TC C G++G C
Sbjct: 1 NSYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRC 42
Score = 27.1 bits (60), Expect = 7.0
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 313 CHNGATCTN--SVGGFSCICVNGWTGPDC 339
C NG C + S+ ++C CV G++G C
Sbjct: 14 CLNGGVCMHIESLDSYTCNCVIGYSGDRC 42
Score = 27.1 bits (60), Expect = 8.4
Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 670 NECYSNPCQHAGTCE--DRIADYACYCLPMWNGKNCDLYD 707
Y C + G C + + Y C C+ ++G C D
Sbjct: 7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRD 46
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase,
cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS
HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A*
3ntb_A* 3q7d_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A*
6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A*
3hs6_A* 3hs7_A* 3krk_A* ...
Length = 587
Score = 47.4 bits (112), Expect = 5e-05
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 37 ANSCDSFPCMNGGTCTLKSLDRYTCTCAP-GFTGSQCE 73
AN C S PC N G C D+Y C C GF G C
Sbjct: 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38
Score = 45.9 bits (108), Expect = 1e-04
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 228 PCDPSPCQNGGVCRELDNLNYECEC-QSGYRGKNCE 262
PC +PCQN G C Y+C+C ++G+ G+NC
Sbjct: 3 PCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38
Score = 44.7 bits (105), Expect = 3e-04
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 78 CASSPCRNGAVCTSL-EDTYECDCAP-GFVGQTCS 110
C S+PC+N C S D Y+CDC GF G+ C+
Sbjct: 4 CCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38
Score = 44.0 bits (103), Expect = 4e-04
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 1394 DECGSNPCQHGGICTDH-LNGYTCEC-QIGYTGINCEI 1429
+ C SNPCQ+ G C + Y C+C + G+ G NC
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 41.6 bits (97), Expect = 0.002
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 1318 NECASNPCANGGVCVDL-IDGFKCECPR-GYYDARC 1351
N C SNPC N G C+ D +KC+C R G+Y C
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENC 37
Score = 41.6 bits (97), Expect = 0.002
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 1280 NECYSNPCRNGAKCVD-GINRYSCECLP-GYTGLHCET 1315
N C SNPC+N +C+ G ++Y C+C G+ G +C T
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 41.6 bits (97), Expect = 0.003
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 632 CDSNPCQNGGFCRSKEGGGYRCDCPP-GATGTHCE 665
C SNPCQN G C S Y+CDC G G +C
Sbjct: 4 CCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38
Score = 39.7 bits (92), Expect = 0.010
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 985 DDCASFPCQNGGTCLDEVGD-YSCLCVD-GFSGKHCEV 1020
+ C S PCQN G C+ D Y C C GF G++C
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 36.3 bits (83), Expect = 0.12
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 187 NECESHPCQNDGSCLDDPGTFRCVCMCEP-GYTGQNCESKYV 227
N C S+PCQN G C+ G + C C G+ G+NC +
Sbjct: 2 NPCCSNPCQNRGECM-STGFDQYKCDCTRTGFYGENCTTPEF 42
Score = 36.3 bits (83), Expect = 0.12
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1129 DECASNPCLNGGICNDL-INTFKCAC-PIGFTGSHCQI 1164
+ C SNPC N G C + +KC C GF G +C
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 34.7 bits (79), Expect = 0.33
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1167 DDCVSSPCHNGGIC-KDSIAGYTCECL-AGFTGMSCET 1202
+ C S+PC N G C Y C+C GF G +C T
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 34.3 bits (78), Expect = 0.49
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 1091 NECESHPCQNDGSCLDDPG-TFRCVCMP-GFTGTQCET 1126
N C S+PCQN G C+ ++C C GF G C T
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 34.3 bits (78), Expect = 0.50
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 670 NECYSNPCQHAGTCEDRIAD-YACYCLPM-WNGKNCD 704
N C SNPCQ+ G C D Y C C + G+NC
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38
Score = 34.3 bits (78), Expect = 0.51
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1242 DECASNPCQFGGQCEDL-INGYQCRCKP-GTSGTNCEI 1277
+ C SNPCQ G+C + Y+C C G G NC
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 33.9 bits (77), Expect = 0.56
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 155 PCEHDGTCVNTPG-SFACNCTQ-GFTGPRCET 184
PC++ G C++T + C+CT+ GF G C T
Sbjct: 8 PCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 33.9 bits (77), Expect = 0.56
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 1059 PCEHDGTCVNTPG-SFACNCTQ-GFTGPRCET 1088
PC++ G C++T + C+CT+ GF G C T
Sbjct: 8 PCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 33.6 bits (76), Expect = 0.70
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 1356 DECASDPCLNGGTC-EDGLNQFICHCKP-GYGGKRCEF 1391
+ C S+PC N G C G +Q+ C C G+ G+ C
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 32.4 bits (73), Expect = 1.9
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 381 DACTSNPCHADAICDTNPIINGSYTCSCA-SGYKGVNCS 418
+ C SNPC C + Y C C +G+ G NC+
Sbjct: 2 NPCCSNPCQNRGECMSTGF--DQYKCDCTRTGFYGENCT 38
Score = 31.6 bits (71), Expect = 2.9
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 266 DDCPGNLCQNGATCMD-GINKYSCLCLAT-YTGDLCE 300
+ C N CQN CM G ++Y C C T + G+ C
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38
Score = 31.6 bits (71), Expect = 3.3
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 435 DDCAFKPCRHGGTCIDL-VNAYKCVC-QVPYTGHDC 468
+ C PC++ G C+ + YKC C + + G +C
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENC 37
Score = 31.6 bits (71), Expect = 3.3
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 868 DDCAFKPCRHGGTCIDL-VNAYKCVC-QVPYTGHDC 901
+ C PC++ G C+ + YKC C + + G +C
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENC 37
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex,
beta propeller, cholesterol clearance, PCSK
autocatalytic cleavage; 7.01A {Homo sapiens}
Length = 791
Score = 47.1 bits (111), Expect = 6e-05
Identities = 70/464 (15%), Positives = 116/464 (25%), Gaps = 58/464 (12%)
Query: 21 CSCPIGFSASLCEIPVANSC--DSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCELQDHC 78
+ + V + C + F C + G C + C + E Q+ C
Sbjct: 5 LRWTVALLLAAAGTAVGDRCERNEFQCQD-GKCISYK---WVCDGSAECQDGSDESQETC 60
Query: 79 ASSPCR------NGAVCTSLEDTYECD----CAPGFVGQTCSEDIIECVDDPCVHGECFN 128
S C+ G V + + CD C G Q C + C G+C +
Sbjct: 61 LSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDGKCIS 120
Query: 129 THGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGP---RCETN 185
D GS +C GP +C ++
Sbjct: 121 RQF-------------------------VCDSDRDCLDGSDEASCPVLTCGPASFQCNSS 155
Query: 186 VNECESHPCQNDGSCLDDPGTFRCVCMCEPGY--TGQNCESKYVPCDPSPCQNGG-VCRE 242
+ C ND C D + C + C + C C + C
Sbjct: 156 TCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSGECIHSSWRC-- 213
Query: 243 LDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCL--CLATYTGDLCE 300
+ +C+ +NC C +G C+ G + C C
Sbjct: 214 ----DGGPDCKDKSDEENCAVATCRPDEFQCSDG-NCIHGSRQCDREYDCKDMSDEVGCV 268
Query: 301 QDVDECSIRPSVCHNGATCTNS-VGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCID 359
CH+G T V + C + P ++C C D
Sbjct: 269 NVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCND 328
Query: 360 RVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSE 419
+ C C G + + + G Y C C G++ ++
Sbjct: 329 LKIGYECLCPDGFQLVAQRRCEDIDECQDPDT-CSQLCVNLEGGYKCQCEEGFQLDPHTK 387
Query: 420 DINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPY 463
K L+ + V +
Sbjct: 388 ACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDT 431
Score = 46.8 bits (110), Expect = 7e-05
Identities = 58/353 (16%), Positives = 87/353 (24%), Gaps = 17/353 (4%)
Query: 1217 CIDGENSFTCACHPGFTGA-LCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGT-N 1274
C +G + C C+ C C D + C +
Sbjct: 92 CDNGSDEQGCPPKTCSQDEFRCHDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQ 151
Query: 1275 CEININECYSNPCRNGAKCVDGINRYSCECLPGY----TGLHCETNINECASNPCANGG- 1329
C + C N C DG + + C Y C C S C +
Sbjct: 152 CNSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSGECIHSSW 211
Query: 1330 VCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRC 1389
C D A C D +C+ C++G D CK C
Sbjct: 212 RCDGGPDCKDKSDEENCAVATCRPDEFQCSDGNCIHGSRQCDR----EYDCKDMSDEVGC 267
Query: 1390 EFDIDECGSNPCQHGG---ICTDHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCI 1446
G N + I D + +C+ E ++C C
Sbjct: 268 VNVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCN 327
Query: 1447 DLVNAYKCVCAKAGNHRCDDECNTIACHFDGNDCS---LGINPWINCTANINCWEVFMNG 1503
DL Y+C+C C I D + CS + + C
Sbjct: 328 DLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTK 387
Query: 1504 RCDEVCNNPQCLFDGRDCEKNLQPCNPIYDAYCQKHYANGHCDYSCNNAECNW 1556
C V + F R + + Y + D + W
Sbjct: 388 ACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYW 440
Score = 46.4 bits (109), Expect = 9e-05
Identities = 74/466 (15%), Positives = 115/466 (24%), Gaps = 57/466 (12%)
Query: 1111 FRCVCMPGF--------TGTQCETDIDECASNPCLNGG-ICNDLINTFKCACPIGFTGSH 1161
++ G +CE + +C C++ +C+ C G S
Sbjct: 3 WKLRWTVALLLAAAGTAVGDRCERNEFQCQDGKCISYKWVCDG-----SAECQDGSDESQ 57
Query: 1162 CQINIDDCVSSPCHNGGICKDSIAGY-----TCECLAGFTGMSCETNINDCASNPCHRGE 1216
C S GG I + +C G C CH G+
Sbjct: 58 ETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDGK 117
Query: 1217 CIDGE-----------NSFTCACHPGFTGA---LCNTQLDECASNPCQFGGQCEDLINGY 1262
CI + S +C G CN+ C CED + +
Sbjct: 118 CISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEW 177
Query: 1263 QCRCK----PGTSGTNCEININECYSNPCRNGAKCVDGINRYSC-ECLPGYTGLHCETNI 1317
RC+ + C C S C + + DG C +
Sbjct: 178 PQRCRGLYVFQGDSSPCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCAVATCRPDE 237
Query: 1318 NECASNPCANGGV-------CVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCE 1370
+C+ C +G C D+ D C + +C S C+
Sbjct: 238 FQCSDGNCIHGSRQCDREYDCKDMSDEVGCVNVTLC----EGPNKFKCHSGECITLDKVC 293
Query: 1371 DGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEIN 1430
+ C+ E +EC N +C D GY C C G+ +
Sbjct: 294 NM----ARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRC 349
Query: 1431 IDDCAFK-PCRHGGTCIDLVNAYKCVCAKAGNHRCDDECNTIACHFDGNDCSLGINPWIN 1489
D + P C++L YKC C D N
Sbjct: 350 EDIDECQDPDTCSQLCVNLEGGYKCQCE---EGFQLDPHTKACKAVGSIAYLFFTNRHEV 406
Query: 1490 CTANINCWEVFMNGRCDEVCNNPQCLFDGRDCEKNLQPCNPIYDAY 1535
++ E + I
Sbjct: 407 RKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQ 452
Score = 43.7 bits (102), Expect = 7e-04
Identities = 74/481 (15%), Positives = 120/481 (24%), Gaps = 69/481 (14%)
Query: 888 YKCVCQVPYTGHDCHQKL-DPCVPNRCQ-HGARCTPSANFQDFACHCGVGWTGRYCNEDV 945
+K V + D C N Q +C D + C G
Sbjct: 3 WKLRWTVALLLAAAGTAVGDRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLS 62
Query: 946 DECQLSSPCRNGATCHNTNGSYLC----ECAKGYEGRDCLINTDDCASFPCQNGG-TCLD 1000
C+ G + C +C G + + C T F C +G
Sbjct: 63 VTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDGKCISRQ 122
Query: 1001 EVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPC 1060
V D C+DG C V +S C++ Q C
Sbjct: 123 FVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWA------------------C 164
Query: 1061 EHDGTCVNTPGSFACNCTQGF----TGPRCETNVNECESHPC------------------ 1098
++D C + + C + C C S C
Sbjct: 165 DNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSGECIHSSWRCDGGPDCKDKSD 224
Query: 1099 -QNDGSCLDDPGTFRC---VCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCA-- 1152
+N P F+C C+ G E D + + + N FKC
Sbjct: 225 EENCAVATCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSG 284
Query: 1153 --------------CPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGM 1198
C + ++C+ + +C D GY C C GF +
Sbjct: 285 ECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV 344
Query: 1199 SCET--NINDCASNPCHRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCE 1256
+ +I++C C++ E + C C GF S F
Sbjct: 345 AQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRH 404
Query: 1257 DLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETN 1316
++ R + + N + L G+
Sbjct: 405 EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT 464
Query: 1317 I 1317
+
Sbjct: 465 V 465
Score = 42.5 bits (99), Expect = 0.001
Identities = 65/413 (15%), Positives = 105/413 (25%), Gaps = 50/413 (12%)
Query: 1186 GYTCECLAGF--------TGMSCETNINDCASNPCHRGE--------CIDGENSFTCACH 1229
G+ G CE N C C + C DG + C
Sbjct: 2 GWKLRWTVALLLAAAGTAVGDRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCL 61
Query: 1230 PGFTGA---LCNTQLDECASNP--CQFGGQCEDLINGYQCRCKPGTSGT-NCEININECY 1283
+ C +++ C C C++ + C K + C
Sbjct: 62 SVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDGKCISR 121
Query: 1284 SNPCRNGAKCVDGINRYSCECLP-GYTGLHCETNINECASNPCANGGVCVDLIDGFKCEC 1342
C + C+DG + SC L G C ++ C N C D D + C
Sbjct: 122 QFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRC 181
Query: 1343 PRGYYDAR----CLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGS 1398
Y C + C S C++ DG CK + C
Sbjct: 182 RGLYVFQGDSSPCSAFEFHCLSGECIHSSWRCDGGP----DCKDKSDEENCAVATCRPDE 237
Query: 1399 NPCQHGGICTDHLN-GYTCECQIGYTGINCEINIDDCAFKPCR-HGGTCIDLVNAYKCVC 1456
C G +C+ + C + H G CI
Sbjct: 238 FQCSDGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSGECIT--------- 288
Query: 1457 AKAGNHRCDDECNTIACHFDGNDCSLGINPWINCTANINCWEVFMNGRCDEVCNNP--QC 1514
+ C+ + C ++ N C V + + C P
Sbjct: 289 ---LDKVCNMARD---CRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQ 342
Query: 1515 LFDGRDCEKNLQPCNPIYDAYCQKHYANGHCDYSCNNAECNWDGLDCEREPPS 1567
L R CE + +P + + G+ + + C+
Sbjct: 343 LVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSI 395
Score = 32.9 bits (74), Expect = 1.3
Identities = 59/352 (16%), Positives = 87/352 (24%), Gaps = 58/352 (16%)
Query: 166 PGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRC--VCMCEPGYTGQNCE 223
+ G RCE N +C+ C + C C+ G
Sbjct: 8 TVALLLAAAGTAVGDRCERNEFQCQDGKCI--------SYKWVCDGSAECQDGSDESQET 59
Query: 224 SKYVPCDPSPCQNGGVCRELDNLNYEC----ECQSGYRGKNCEENIDDCPGNLCQNG--- 276
V C GG + C +C +G + C C +G
Sbjct: 60 CLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDGKCI 119
Query: 277 ---------ATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFS 327
C+DG ++ SC L C + C N C + +
Sbjct: 120 SRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNS-STCIPQLWACDNDPDCEDGSDEWP 178
Query: 328 CICVNGW----TGPDCSLNIDDCAGAAC-------------------FNGATCIDRVGSF 364
C + CS C C N A R F
Sbjct: 179 QRCRGLYVFQGDSSPCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCAVATCRPDEF 238
Query: 365 YC---QCTPGKTGLLCHLEDACTSNPCHADAICDTNPIINGSYTCS---CASGYKGVNCS 418
C C G C E C + T + C C + K N +
Sbjct: 239 QCSDGNCIHG--SRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSGECITLDKVCNMA 296
Query: 419 EDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQ 470
D + E ++C C DL Y+C+C + +
Sbjct: 297 RDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRR 348
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system,
membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo
sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A*
1fsb_A
Length = 162
Score = 44.4 bits (105), Expect = 6e-05
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 1075 CNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDEC 1131
C + C T C+ C G CL+ G + C C PGF G +CE D+
Sbjct: 109 CLKKKHAL---CYTAS--CQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDD 160
Score = 44.0 bits (104), Expect = 8e-05
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 1282 CYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINEC 1320
C C +C++ I Y+C C PG+ G CE ++
Sbjct: 122 CQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDD 160
Score = 43.6 bits (103), Expect = 1e-04
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 1358 CASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDEC 1396
C C G C + + + C C PG+ G CE+ D+
Sbjct: 122 CQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDD 160
Score = 42.9 bits (101), Expect = 2e-04
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 154 SPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECE 190
C G C+ T G++ C+C GF GP CE ++ +
Sbjct: 125 MSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDDD 161
Score = 42.9 bits (101), Expect = 2e-04
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 1058 SPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECE 1094
C G C+ T G++ C+C GF GP CE ++ +
Sbjct: 125 MSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDDD 161
Score = 42.5 bits (100), Expect = 2e-04
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 984 TDDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDEC 1025
T C C G CL+ +G+Y+C C GF G CE D+
Sbjct: 119 TASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDD 160
Score = 39.4 bits (92), Expect = 0.003
Identities = 12/46 (26%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Query: 261 CEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDEC 306
C C C C++ I Y+C C + G CE D+
Sbjct: 117 CY--TASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDD 160
Score = 39.4 bits (92), Expect = 0.003
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 1169 CVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDC 1207
C C G C ++I YTC C GF G CE +D
Sbjct: 122 CQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDD 160
Score = 39.4 bits (92), Expect = 0.003
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Query: 1124 CETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDC 1169
C T C C G C + I + C+C GF G C+ DD
Sbjct: 117 CYTAS--CQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDD 160
Score = 39.0 bits (91), Expect = 0.004
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 1244 CASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININEC 1282
C C G+C + I Y C C PG G CE ++
Sbjct: 122 CQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDD 160
Score = 38.6 bits (90), Expect = 0.006
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 1396 CGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDC 1434
C C G C + + YTC C G+ G CE DD
Sbjct: 122 CQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDD 160
Score = 38.6 bits (90), Expect = 0.006
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 228 PCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDC 268
C C G C E NY C C G+ G CE DD
Sbjct: 121 SCQDMSCSKQGECLE-TIGNYTCSCYPGFYGPECEYVRDDD 160
Score = 36.3 bits (84), Expect = 0.035
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 7/58 (12%)
Query: 21 CSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCELQDHC 78
C LC SC C G C L+++ YTC+C PGF G +CE
Sbjct: 109 CLKKKHA---LCYTA---SCQDMSCSKQGEC-LETIGNYTCSCYPGFYGPECEYVRDD 159
Score = 35.9 bits (83), Expect = 0.047
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Query: 1313 CETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDEC 1358
C T C C+ G C++ I + C C G+Y C D+
Sbjct: 117 CYTAS--CQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDD 160
Score = 34.8 bits (80), Expect = 0.10
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 307 SIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDC 346
S + C C ++G ++C C G+ GP+C DD
Sbjct: 121 SCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDD 160
Score = 34.8 bits (80), Expect = 0.12
Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Query: 1648 TSTLGIICEINVPDCLPGACHNNGTCVDKVGGFECRCPPGFVGSR 1692
+C C +C G C++ +G + C C PGF G
Sbjct: 110 LKKKHALCYT--ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPE 152
Score = 34.4 bits (79), Expect = 0.15
Identities = 13/40 (32%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Query: 664 CELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNC 703
C S C C G C + I +Y C C P + G C
Sbjct: 117 CYTAS---CQDMSCSKQGECLETIGNYTCSCYPGFYGPEC 153
Score = 34.0 bits (78), Expect = 0.19
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 524 CLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCE 558
C CS G C++ + NY C+C PG+ G CE
Sbjct: 122 CQDMSCSKQGE--CLETIGNYTCSCYPGFYGPECE 154
Score = 34.0 bits (78), Expect = 0.21
Identities = 17/60 (28%), Positives = 22/60 (36%), Gaps = 7/60 (11%)
Query: 171 CNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCD 230
C + C T C+ C G CL+ G + C C PG+ G CE D
Sbjct: 109 CLKKKHAL---CYTAS--CQDMSCSKQGECLETIGNYTCS--CYPGFYGPECEYVRDDDD 161
Score = 33.6 bits (77), Expect = 0.26
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 951 SSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDC 987
C C T G+Y C C G+ G +C DD
Sbjct: 124 DMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDD 160
Score = 33.2 bits (76), Expect = 0.33
Identities = 9/46 (19%), Positives = 14/46 (30%), Gaps = 2/46 (4%)
Query: 904 KLDPCVPNRCQHGARCTPSANFQDFACHCGVGWTGRYCNEDVDECQ 949
C C C + ++ C C G+ G C D+
Sbjct: 118 YTASCQDMSCSKQGECLETIG--NYTCSCYPGFYGPECEYVRDDDD 161
Score = 32.5 bits (74), Expect = 0.75
Identities = 13/37 (35%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
Query: 632 CDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCELDS 668
C C G C G Y C C PG G CE
Sbjct: 122 CQDMSCSKQGECLE-TIGNYTCSCYPGFYGPECEYVR 157
Score = 31.3 bits (71), Expect = 1.6
Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 78 CASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVD 118
C C C Y C C PGF G C E + + D
Sbjct: 122 CQDMSCSKQGECLETIGNYTCSCYPGFYGPEC-EYVRDDDD 161
Score = 31.3 bits (71), Expect = 1.7
Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Query: 430 CEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPC 475
C C C G C++ + Y C C + G +C D
Sbjct: 117 CYT--ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDD 160
Score = 31.3 bits (71), Expect = 1.9
Identities = 10/39 (25%), Positives = 15/39 (38%)
Query: 870 CAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPC 908
C C G C++ + Y C C + G +C D
Sbjct: 122 CQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDD 160
Score = 30.9 bits (70), Expect = 2.1
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Query: 381 DACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQ 426
+C C C G+YTCSC G+ G C ++ ++
Sbjct: 120 ASCQDMSCSKQGECLETI---GNYTCSCYPGFYGPECEYVRDDDDK 162
Score = 29.4 bits (66), Expect = 6.4
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 601 NGGVCTALDGGHTCICPDNYSGRNCEYFGYDCD 633
G C G +TC C + G CEY D D
Sbjct: 129 KQGECLETIGNYTCSCYPGFYGPECEYVRDDDD 161
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane
protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP:
d.169.1.1 g.3.11.1 PDB: 1esl_A
Length = 157
Score = 44.4 bits (105), Expect = 6e-05
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 1275 CEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCE 1314
C C + C +CV+ IN Y+C+C PG++GL CE
Sbjct: 117 CYTA--ACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE 154
Score = 42.4 bits (100), Expect = 3e-04
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Query: 1075 CNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDI 1128
C+ + C T C + C G C++ + C C PGF+G +CE +
Sbjct: 109 CSKKKLAL---CYTA--ACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIV 157
Score = 40.9 bits (96), Expect = 8e-04
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 1356 DECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDI 1393
C + C G C + +N + C C PG+ G +CE +
Sbjct: 120 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIV 157
Score = 39.4 bits (92), Expect = 0.003
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 154 SPCEHDGTCVNTPGSFACNCTQGFTGPRCETNV 186
+ C G CV T ++ C C GF+G +CE V
Sbjct: 125 TSCSGHGECVETINNYTCKCDPGFSGLKCEQIV 157
Score = 39.4 bits (92), Expect = 0.003
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1058 SPCEHDGTCVNTPGSFACNCTQGFTGPRCETNV 1090
+ C G CV T ++ C C GF+G +CE V
Sbjct: 125 TSCSGHGECVETINNYTCKCDPGFSGLKCEQIV 157
Score = 39.4 bits (92), Expect = 0.003
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 517 CEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCE 558
C C + CS HG CV+ +NNY C C PG+ G CE
Sbjct: 117 CY--TAACTNTSCSGHGE--CVETINNYTCKCDPGFSGLKCE 154
Score = 39.4 bits (92), Expect = 0.003
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 1240 QLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCE 1276
C + C G+C + IN Y C+C PG SG CE
Sbjct: 118 YTAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE 154
Score = 39.0 bits (91), Expect = 0.004
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 1124 CETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQ 1163
C T C + C G C + IN + C C GF+G C+
Sbjct: 117 CYTA--ACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE 154
Score = 39.0 bits (91), Expect = 0.005
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 1162 CQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCE 1201
C C ++ C G C ++I YTC+C GF+G+ CE
Sbjct: 117 CYT--AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE 154
Score = 38.6 bits (90), Expect = 0.005
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 1389 CEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCE 1428
C C + C G C + +N YTC+C G++G+ CE
Sbjct: 117 CYTA--ACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE 154
Score = 38.6 bits (90), Expect = 0.005
Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 14/64 (21%)
Query: 956 NGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEVGDYSCLCVDGFSG 1015
N C LC T C + C G C++ + +Y+C C GFSG
Sbjct: 105 NDERCSKKKL-ALCY-------------TAACTNTSCSGHGECVETINNYTCKCDPGFSG 150
Query: 1016 KHCE 1019
CE
Sbjct: 151 LKCE 154
Score = 37.8 bits (88), Expect = 0.011
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 261 CEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDV 303
C C C C++ IN Y+C C ++G CEQ V
Sbjct: 117 CY--TAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIV 157
Score = 37.4 bits (87), Expect = 0.013
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 225 KYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEE 263
C + C G C E NY C+C G+ G CE+
Sbjct: 118 YTAACTNTSCSGHGECVE-TINNYTCKCDPGFSGLKCEQ 155
Score = 37.0 bits (86), Expect = 0.021
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Query: 21 CSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCE 73
CS LC +C + C G C ++++ YTC C PGF+G +CE
Sbjct: 109 CSKKKLA---LCYTA---ACTNTSCSGHGECV-ETINNYTCKCDPGFSGLKCE 154
Score = 35.9 bits (83), Expect = 0.044
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Query: 171 CNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCE 223
C+ + C T C + C G C++ + C C+PG++G CE
Sbjct: 109 CSKKKLAL---CYTA--ACTNTSCSGHGECVETINNYTCK--CDPGFSGLKCE 154
Score = 34.7 bits (80), Expect = 0.10
Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 1648 TSTLGIICEINVPDCLPGACHNNGTCVDKVGGFECRCPPGFVGSR 1692
+ +C C +C +G CV+ + + C+C PGF G +
Sbjct: 110 SKKKLALCYT--AACTNTSCSGHGECVETINNYTCKCDPGFSGLK 152
Score = 34.7 bits (80), Expect = 0.11
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 1313 CETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARC 1351
C T C + C+ G CV+ I+ + C+C G+ +C
Sbjct: 117 CYTA--ACTNTSCSGHGECVETINNYTCKCDPGFSGLKC 153
Score = 34.0 bits (78), Expect = 0.22
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 664 CELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNCD 704
C C + C G C + I +Y C C P ++G C+
Sbjct: 117 CY---TAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE 154
Score = 33.2 bits (76), Expect = 0.38
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 951 SSPCRNGATCHNTNGSYLCECAKGYEGRDC 980
++ C C T +Y C+C G+ G C
Sbjct: 124 NTSCSGHGECVETINNYTCKCDPGFSGLKC 153
Score = 32.8 bits (75), Expect = 0.43
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 72 CELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDI 113
C C ++ C C + Y C C PGF G C + +
Sbjct: 117 CY-TAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIV 157
Score = 32.8 bits (75), Expect = 0.44
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 632 CDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCE 665
C + C G C Y C C PG +G CE
Sbjct: 122 CTNTSCSGHGECVE-TINNYTCKCDPGFSGLKCE 154
Score = 31.7 bits (72), Expect = 1.3
Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Query: 298 LCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDC 339
LC + + C C ++ ++C C G++G C
Sbjct: 116 LCYTA----ACTNTSCSGHGECVETINNYTCKCDPGFSGLKC 153
Score = 30.9 bits (70), Expect = 1.9
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 430 CEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQ 470
C C G C++ +N Y C C ++G C Q
Sbjct: 117 CYTAACTNT--SCSGHGECVETINNYTCKCDPGFSGLKCEQ 155
Score = 30.1 bits (68), Expect = 3.9
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 381 DACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDI 421
ACT+ C C +YTC C G+ G+ C + +
Sbjct: 120 AACTNTSCSGHGEC---VETINNYTCKCDPGFSGLKCEQIV 157
Score = 29.7 bits (67), Expect = 4.9
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 867 IDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQ 903
C C G C++ +N Y C C ++G C Q
Sbjct: 119 TAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQ 155
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane,
secreted, protease, PALM hydrolase, developmental
protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo
sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Length = 463
Score = 46.5 bits (110), Expect = 7e-05
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Query: 211 CMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEE 263
C C PG+ G C + C+P C++GGVC + +C C+ GY G CE+
Sbjct: 410 CCCSPGWEGDFCRT--AKCEP-ACRHGGVCVRPN----KCLCKKGYLGPQCEQ 455
Score = 45.4 bits (107), Expect = 2e-04
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 13/78 (16%)
Query: 903 QKLDPCVPNRCQHGARCTPSANFQDFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHN 962
Q L C++G CTP+ C C GW G +C + CR+G C
Sbjct: 389 QTLTSECSRLCRNG-YCTPTGK-----CCCSPGWEGDFCR----TAKCEPACRHGGVCVR 438
Query: 963 TNGSYLCECAKGYEGRDC 980
N C C KGY G C
Sbjct: 439 PNK---CLCKKGYLGPQC 453
Score = 41.9 bits (98), Expect = 0.002
Identities = 22/96 (22%), Positives = 31/96 (32%), Gaps = 15/96 (15%)
Query: 1068 NTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETD 1127
C T C + C G +C C PG+ G C
Sbjct: 374 RPLMPEECRATVQPAQTLTSECSRLCRNGYCTPTG---------KCCCSPGWEGDFCR-- 422
Query: 1128 IDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQ 1163
+C C +GG+C + KC C G+ G C+
Sbjct: 423 TAKCEP-ACRHGGVC---VRPNKCLCKKGYLGPQCE 454
Score = 41.1 bits (96), Expect = 0.003
Identities = 26/84 (30%), Positives = 32/84 (38%), Gaps = 10/84 (11%)
Query: 936 WTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNG 995
+ S CRNG C T C C+ G+EG C C C++G
Sbjct: 381 CRATVQPAQTLTSECSRLCRNG-YCTPTGK---CCCSPGWEGDFCRTAK--CEP-ACRHG 433
Query: 996 GTCLDEVGDYSCLCVDGFSGKHCE 1019
G C V CLC G+ G CE
Sbjct: 434 GVC---VRPNKCLCKKGYLGPQCE 454
Score = 41.1 bits (96), Expect = 0.003
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 9/79 (11%)
Query: 1047 TNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLD 1106
S +G C T C C+ G+ G C T +CE C++ G C+
Sbjct: 385 VQPAQTLTSECSRLCRNGYCTPTGK---CCCSPGWEGDFCRTA--KCEP-ACRHGGVCVR 438
Query: 1107 DPGTFRCVCMPGFTGTQCE 1125
+C+C G+ G QCE
Sbjct: 439 PN---KCLCKKGYLGPQCE 454
Score = 41.1 bits (96), Expect = 0.004
Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 11/104 (10%)
Query: 1326 ANGGVCVDLIDGFKCECPRGY-YDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGY 1384
+ G ++D + P + + S C NG G C C PG+
Sbjct: 361 THNGKLYKIVDPKRPLMPEECRATVQPAQTLTSECSRLCRNGYCTPTGK----CCCSPGW 416
Query: 1385 GGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCE 1428
G C +C C+HGG+C + C C+ GY G CE
Sbjct: 417 EGDFCR--TAKCEP-ACRHGGVC---VRPNKCLCKKGYLGPQCE 454
Score = 40.0 bits (93), Expect = 0.007
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 10/88 (11%)
Query: 24 PIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCELQDHCASSPC 83
P A++ S S C NG CT C C+PG+ G C C C
Sbjct: 378 PEECRATVQPAQTLTSECSRLCRNG-YCTPTGK----CCCSPGWEGDFCRTA-KCEP-AC 430
Query: 84 RNGAVCTSLEDTYECDCAPGFVGQTCSE 111
R+G VC +C C G++G C +
Sbjct: 431 RHGGVCV---RPNKCLCKKGYLGPQCEQ 455
Score = 40.0 bits (93), Expect = 0.009
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 10/65 (15%)
Query: 1287 CRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGY 1346
CRNG G C C PG+ G C +C C +GGVCV KC C +GY
Sbjct: 399 CRNGYCTPTGK----CCCSPGWEGDFCR--TAKCEP-ACRHGGVCV---RPNKCLCKKGY 448
Query: 1347 YDARC 1351
+C
Sbjct: 449 LGPQC 453
Score = 39.6 bits (92), Expect = 0.011
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 11/81 (13%)
Query: 143 TNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLD 202
S +G C T C C+ G+ G C T +CE C++ G C+
Sbjct: 385 VQPAQTLTSECSRLCRNGYCTPTGK---CCCSPGWEGDFCRTA--KCEP-ACRHGGVCVR 438
Query: 203 DPGTFRCVCMCEPGYTGQNCE 223
P C+C+ GY G CE
Sbjct: 439 -PNK----CLCKKGYLGPQCE 454
Score = 38.8 bits (90), Expect = 0.017
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 19/65 (29%)
Query: 406 CSCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTG 465
C C+ G++G C +CE CRHGG C V KC+C+ Y G
Sbjct: 410 CCCSPGWEGDFCR--TAKCE--------------PACRHGGVC---VRPNKCLCKKGYLG 450
Query: 466 HDCHQ 470
C Q
Sbjct: 451 PQCEQ 455
Score = 38.0 bits (88), Expect = 0.029
Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 7/107 (6%)
Query: 196 NDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNY-ECECQS 254
+ G + + + C + P + +CR +C C
Sbjct: 355 SKSMTQTHNGKLYKIVDPKRPLMPEECRATVQPAQTLTSECSRLCRNGYCTPTGKCCCSP 414
Query: 255 GYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQ 301
G+ G C + C++G C + CLC Y G CEQ
Sbjct: 415 GWEGDFCRTAKCEPA---CRHGGVC---VRPNKCLCKKGYLGPQCEQ 455
Score = 37.6 bits (87), Expect = 0.037
Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 9/65 (13%)
Query: 1212 CHRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTS 1271
C G C C C PG+ G C T C C+ GG C + +C CK G
Sbjct: 399 CRNGYCTPTGK---CCCSPGWEGDFCRTAK--CEP-ACRHGGVC---VRPNKCLCKKGYL 449
Query: 1272 GTNCE 1276
G CE
Sbjct: 450 GPQCE 454
Score = 37.3 bits (86), Expect = 0.053
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 8/62 (12%)
Query: 16 SPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCELQ 75
+P+ C C G+ C C+ C +GG C + C C G+ G QCE
Sbjct: 405 TPTGKCCCSPGWEGDFCRTAK---CEP-ACRHGGVCVRPN----KCLCKKGYLGPQCEQV 456
Query: 76 DH 77
DH
Sbjct: 457 DH 458
Score = 35.7 bits (82), Expect = 0.16
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 1147 NTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCE 1201
T KC C G+ G C+ + C +GG+C + C C G+ G CE
Sbjct: 406 PTGKCCCSPGWEGDFCRTAKCE---PACRHGGVC---VRPNKCLCKKGYLGPQCE 454
Score = 35.3 bits (81), Expect = 0.20
Identities = 24/94 (25%), Positives = 28/94 (29%), Gaps = 15/94 (15%)
Query: 1221 ENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININ 1280
C L + C + C G+C C PG G C
Sbjct: 376 LMPEECRATVQPAQTLTSECSRLCRNGYCTPTGKCC---------CSPGWEGDFCRTAKC 426
Query: 1281 ECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCE 1314
E CR+G CV C C GY G CE
Sbjct: 427 E---PACRHGGVCV---RPNKCLCKKGYLGPQCE 454
Score = 35.0 bits (80), Expect = 0.26
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Query: 874 PCRHGGTCIDLVNAYKCVCQVPYTGHDCHQ 903
CRHGG C V KC+C+ Y G C Q
Sbjct: 429 ACRHGGVC---VRPNKCLCKKGYLGPQCEQ 455
Score = 34.2 bits (78), Expect = 0.48
Identities = 18/68 (26%), Positives = 24/68 (35%), Gaps = 10/68 (14%)
Query: 603 GVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGT 662
G CT C C + G C C+ C++GG C +C C G G
Sbjct: 402 GYCTPTGK---CCCSPGWEGDFCRT--AKCEP-ACRHGGVCVRPN----KCLCKKGYLGP 451
Query: 663 HCELDSRN 670
CE +
Sbjct: 452 QCEQVDHH 459
Score = 32.3 bits (73), Expect = 1.8
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 6/44 (13%)
Query: 1416 CECQIGYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCAKA 1459
C C G+ G C + CRHGG C V KC+C K
Sbjct: 410 CCCSPGWEGDFCRTAKCE---PACRHGGVC---VRPNKCLCKKG 447
Score = 31.5 bits (71), Expect = 3.0
Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 12/69 (17%)
Query: 272 LCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICV 331
LC+NG G C C + GD C +C C +G C V C+C
Sbjct: 398 LCRNGYCTPTGK----CCCSPGWEGDFCR--TAKCE---PACRHGGVC---VRPNKCLCK 445
Query: 332 NGWTGPDCS 340
G+ GP C
Sbjct: 446 KGYLGPQCE 454
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal
anti-inflammatory drug, peroxi prostaglandin synthase,
EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A
{Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A*
2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A*
2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A*
1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Length = 553
Score = 46.2 bits (109), Expect = 1e-04
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 228 PCDPSPCQNGGVCRELDNLNYECEC-QSGYRGKNCE 262
PC PCQ+ G+C Y+C+C ++GY G NC
Sbjct: 4 PCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39
Score = 46.2 bits (109), Expect = 1e-04
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 37 ANSCDSFPCMNGGTCTLKSLDRYTCTCAP-GFTGSQCE 73
N C +PC + G C LDRY C C G++G C
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39
Score = 45.0 bits (106), Expect = 3e-04
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 78 CASSPCRNGAVCTSL-EDTYECDCAP-GFVGQTCS 110
C PC++ +C D Y+CDC G+ G C+
Sbjct: 5 CCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39
Score = 44.3 bits (104), Expect = 4e-04
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 1393 IDECGSNPCQHGGICTDH-LNGYTCEC-QIGYTGINCEI 1429
++ C PCQH GIC L+ Y C+C + GY+G NC I
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 43.5 bits (102), Expect = 7e-04
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 1317 INECASNPCANGGVCVDL-IDGFKCECPR-GYYDARC 1351
+N C PC + G+CV +D ++C+C R GY C
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNC 38
Score = 40.4 bits (94), Expect = 0.006
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 1279 INECYSNPCRNGAKCVD-GINRYSCECLP-GYTGLHCET 1315
+N C PC++ CV G++RY C+C GY+G +C
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 40.4 bits (94), Expect = 0.007
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 632 CDSNPCQNGGFCRSKEGGGYRCDC-PPGATGTHCE 665
C PCQ+ G C Y+CDC G +G +C
Sbjct: 5 CCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39
Score = 37.7 bits (87), Expect = 0.043
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 985 DDCASFPCQNGGTCLD-EVGDYSCLCVD-GFSGKHCEV 1020
+ C +PCQ+ G C+ + Y C C G+SG +C +
Sbjct: 3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 37.7 bits (87), Expect = 0.045
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 186 VNECESHPCQNDGSCLDDPGTFRCVCMCEP-GYTGQNCES 224
VN C +PCQ+ G C+ G R C C GY+G NC
Sbjct: 2 VNPCCYYPCQHQGICV-RFGLDRYQCDCTRTGYSGPNCTI 40
Score = 35.4 bits (81), Expect = 0.19
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 521 INECLSNPCSSHGTLDCVQL-VNNYHCNC-RPGYMGRHCEVKDLAVKVTSM 569
+N C PC G CV+ ++ Y C+C R GY G +C + ++ + +
Sbjct: 2 VNPCCYYPCQHQGI--CVRFGLDRYQCDCTRTGYSGPNCTIPEIWTWLRTT 50
Score = 35.4 bits (81), Expect = 0.21
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 1166 IDDCVSSPCHNGGIC-KDSIAGYTCECLA-GFTGMSCET 1202
++ C PC + GIC + + Y C+C G++G +C
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 35.4 bits (81), Expect = 0.23
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 1128 IDECASNPCLNGGICNDL-INTFKCAC-PIGFTGSHCQI 1164
++ C PC + GIC ++ ++C C G++G +C I
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 35.0 bits (80), Expect = 0.27
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 1355 VDECASDPCLNGGTC-EDGLNQFICHCKP-GYGGKRCEF 1391
V+ C PC + G C GL+++ C C GY G C
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 34.6 bits (79), Expect = 0.35
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 1090 VNECESHPCQNDGSCLDDP-GTFRCVCMP-GFTGTQCET 1126
VN C +PCQ+ G C+ ++C C G++G C
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 34.2 bits (78), Expect = 0.54
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 155 PCEHDGTCVNTP-GSFACNCTQ-GFTGPRCET 184
PC+H G CV + C+CT+ G++GP C
Sbjct: 9 PCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 34.2 bits (78), Expect = 0.54
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 1059 PCEHDGTCVNTP-GSFACNCTQ-GFTGPRCET 1088
PC+H G CV + C+CT+ G++GP C
Sbjct: 9 PCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 33.9 bits (77), Expect = 0.58
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 670 NECYSNPCQHAGTCEDRIAD-YACYCLPM-WNGKNCD 704
N C PCQH G C D Y C C ++G NC
Sbjct: 3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39
Score = 33.5 bits (76), Expect = 0.82
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 381 DACTSNPCHADAICDTNPIINGSYTCSC-ASGYKGVNCS 418
+ C PC IC + Y C C +GY G NC+
Sbjct: 3 NPCCYYPCQHQGICVRFGL--DRYQCDCTRTGYSGPNCT 39
Score = 33.5 bits (76), Expect = 0.87
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 1241 LDECASNPCQFGGQCEDL-INGYQCRCKP-GTSGTNCEI 1277
++ C PCQ G C ++ YQC C G SG NC I
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 31.9 bits (72), Expect = 2.3
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 434 IDDCAFKPCRHGGTCIDL-VNAYKCVC-QVPYTGHDC 468
++ C + PC+H G C+ ++ Y+C C + Y+G +C
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNC 38
Score = 31.9 bits (72), Expect = 2.3
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 867 IDDCAFKPCRHGGTCIDL-VNAYKCVC-QVPYTGHDC 901
++ C + PC+H G C+ ++ Y+C C + Y+G +C
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNC 38
Score = 31.9 bits (72), Expect = 2.5
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 265 IDDCPGNLCQNGATCMD-GINKYSCLCLAT-YTGDLCE 300
++ C CQ+ C+ G+++Y C C T Y+G C
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39
Score = 30.0 bits (67), Expect = 8.5
Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1431 IDDCAFKPCRHGGTCIDL-VNAYKCVCAKAGNH 1462
++ C + PC+H G C+ ++ Y+C C + G
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYS 34
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine
protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Length = 424
Score = 45.6 bits (108), Expect = 1e-04
Identities = 16/146 (10%), Positives = 30/146 (20%), Gaps = 17/146 (11%)
Query: 1135 PCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAG 1194
PCL + V + C N ++ + Y
Sbjct: 35 PCLAWASAQAKALSKHQDFNSA----------VQLVENFCRNPDGDEEGVWCYVAGKPGD 84
Query: 1195 FTGM---SCETNINDCASNPCHRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQF 1251
F CE + + + E + + + F C
Sbjct: 85 FGYCDLNYCEEAVEEETGDGLDEDSDRAIEGATATSEYQTFFNPATFG----SGEADCGL 140
Query: 1252 GGQCEDLINGYQCRCKPGTSGTNCEI 1277
E + + S + I
Sbjct: 141 RPLFEKKSLEDKTERELLESYIDGRI 166
Score = 44.9 bits (106), Expect = 2e-04
Identities = 16/134 (11%), Positives = 31/134 (23%), Gaps = 13/134 (9%)
Query: 1096 HPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPI 1155
PC S + + N C N + + + P
Sbjct: 34 LPCLAWASAQAKALSKHQDFNSA----------VQLVENFCRNPDGDEEGVWCYVAGKPG 83
Query: 1156 GFTGSH---CQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPC 1212
F C+ +++ A T E F + + DC P
Sbjct: 84 DFGYCDLNYCEEAVEEETGDGLDEDSDRAIEGATATSEYQTFFNPATFGSGEADCGLRPL 143
Query: 1213 HRGECIDGENSFTC 1226
+ ++ +
Sbjct: 144 FEKKSLEDKTEREL 157
Score = 44.9 bits (106), Expect = 2e-04
Identities = 17/128 (13%), Positives = 33/128 (25%), Gaps = 23/128 (17%)
Query: 1303 ECLPG----YTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDEC 1358
+C+P Y G T PC + + +
Sbjct: 14 QCVPDRGQQYQGRLAVTT----HGLPCLAWASAQAKALSKHQDF----------NSAVQL 59
Query: 1359 ASDPCLNGGTCEDGLNQFICHCKPGYGGK---RCEFDIDECGSNPCQHGGICTDHLNGYT 1415
+ C N E+G+ ++ +G CE ++E + + G T
Sbjct: 60 VENFCRNPDGDEEGVWCYVAGKPGDFGYCDLNYCEEAVEEETGDGLDED--SDRAIEGAT 117
Query: 1416 CECQIGYT 1423
+
Sbjct: 118 ATSEYQTF 125
Score = 42.9 bits (101), Expect = 0.001
Identities = 21/159 (13%), Positives = 33/159 (20%), Gaps = 27/159 (16%)
Query: 1248 PCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPG 1307
PC + + N CRN +G+ Y
Sbjct: 35 PCLAWASAQAKALSKHQDFNSA----------VQLVENFCRNPDGDEEGVWCYVAGKPGD 84
Query: 1308 YTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGG 1367
+ N C D +D G S+ + G
Sbjct: 85 FGYCDL----NYCEEAVEEE---TGDGLDEDSDRAIEGA---TATSEYQTFFNPATFGSG 134
Query: 1368 TCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGI 1406
+ C +P + K E + G I
Sbjct: 135 EAD-------CGLRPLFEKKSLEDKTERELLESYIDGRI 166
Score = 40.2 bits (94), Expect = 0.006
Identities = 16/139 (11%), Positives = 30/139 (21%), Gaps = 16/139 (11%)
Query: 1215 GECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTN 1274
S + + N C+ E+ + Y +
Sbjct: 40 ASAQAKALSKHQDFNSA----------VQLVENFCRNPDGDEEGVWCYVAGKPGDFGYCD 89
Query: 1275 ---CEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVC 1331
CE + E + + + E + + +C P
Sbjct: 90 LNYCEEAVEEETGDGLDEDSDRAIEGATATSEYQTFFNPATFGSGEADCGLRPLFEKKSL 149
Query: 1332 VDLIDGFKCECPRGYYDAR 1350
D + E Y D R
Sbjct: 150 EDKTE---RELLESYIDGR 165
Score = 39.5 bits (92), Expect = 0.010
Identities = 15/118 (12%), Positives = 30/118 (25%), Gaps = 10/118 (8%)
Query: 151 IAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCV 210
G PC + S + + + C+N + +
Sbjct: 31 THGLPCLAWASAQAKALSKHQDFNSA----------VQLVENFCRNPDGDEEGVWCYVAG 80
Query: 211 CMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDC 268
+ GY N + V + + R ++ E Q+ + DC
Sbjct: 81 KPGDFGYCDLNYCEEAVEEETGDGLDEDSDRAIEGATATSEYQTFFNPATFGSGEADC 138
Score = 38.3 bits (89), Expect = 0.022
Identities = 13/148 (8%), Positives = 31/148 (20%), Gaps = 18/148 (12%)
Query: 1055 IAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCV 1114
G PC + S + + + C+N + +
Sbjct: 31 THGLPCLAWASAQAKALSKHQDFNSA----------VQLVENFCRNPDGDEEGVWCYVAG 80
Query: 1115 CMPGFTGTQ---CETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVS 1171
F CE ++E + + + + F
Sbjct: 81 KPGDFGYCDLNYCEEAVEEETGDGL-DEDSDRAIEGATATSEYQTFFNPATF----GSGE 135
Query: 1172 SPCHNGGICKDSIAGYTCECLAGFTGMS 1199
+ C + + E + +
Sbjct: 136 ADCGLRPLFEKKSLEDKTERELLESYID 163
Score = 38.3 bits (89), Expect = 0.025
Identities = 12/115 (10%), Positives = 22/115 (19%), Gaps = 11/115 (9%)
Query: 1400 PCQHGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCAKA 1459
PC + CR+ + V Y
Sbjct: 35 PCLAWASAQAKALSKHQDFNSA----------VQLVENFCRNPDGDEEGVWCYVAGKPGD 84
Query: 1460 GNHRCDDECNTIACHFDGNDCSLGINPWINCTANINCWEVFMNGRCDEVCNNPQC 1514
+ + C G+ + I + ++ F N C
Sbjct: 85 FGYCDLNYCEEAVEEETGDGLDEDSDRAIEGATATSEYQTFFNPATFG-SGEADC 138
Score = 37.9 bits (88), Expect = 0.030
Identities = 11/102 (10%), Positives = 21/102 (20%), Gaps = 2/102 (1%)
Query: 20 WCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCELQDHCA 79
W S + + A C N + + Y F +
Sbjct: 39 WASAQAKALSKHQDFNSAVQLVENFCRNPDGDE-EGVWCYVAGKPGDFGYCDLNYCEEAV 97
Query: 80 SSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPC 121
+G + + E A + + C
Sbjct: 98 EEETGDG-LDEDSDRAIEGATATSEYQTFFNPATFGSGEADC 138
Score = 37.2 bits (86), Expect = 0.052
Identities = 16/151 (10%), Positives = 30/151 (19%), Gaps = 19/151 (12%)
Query: 991 PCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIFIFFTNQY 1050
PC + + + N C N + ++
Sbjct: 35 PCLAWASAQAKALSKHQDFNSA----------VQLVENFCRNPDGDEEGVWCYVAGKPG- 83
Query: 1051 SWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGT 1110
+ + CE G + G + + G
Sbjct: 84 DFGYCDLNYCEEAVEEETGDGLDEDSDRAI-EGATATSEYQTFFNPATFG-------SGE 135
Query: 1111 FRCVCMPGFTGTQCETDIDECASNPCLNGGI 1141
C P F E + ++G I
Sbjct: 136 ADCGLRPLFEKKSLEDKTERELLESYIDGRI 166
Score = 36.8 bits (85), Expect = 0.078
Identities = 17/141 (12%), Positives = 25/141 (17%), Gaps = 15/141 (10%)
Query: 44 PCMNGGTCTLKSLDRYTCTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTYECDCAPG 103
PC+ + K+ + CRN Y
Sbjct: 35 PCLAWASAQAKA-LSKHQDFNSA---------VQLVENFCRNPDGDEEGVWCYVAGKPGD 84
Query: 104 FVGQT---CSEDIIECVDDPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDG 160
F C E + E D G+ FF F + C
Sbjct: 85 FGYCDLNYCEEAVEEETGDGLDEDSDRAIEGATATSEYQTFFNPA--TFGSGEADCGLRP 142
Query: 161 TCVNTPGSFACNCTQGFTGPR 181
+
Sbjct: 143 LFEKKSLEDKTERELLESYID 163
Score = 36.0 bits (83), Expect = 0.13
Identities = 9/58 (15%), Positives = 18/58 (31%), Gaps = 4/58 (6%)
Query: 650 GYRC----DCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNC 703
G C A H + +S + N C++ E+ + Y + +
Sbjct: 33 GLPCLAWASAQAKALSKHQDFNSAVQLVENFCRNPDGDEEGVWCYVAGKPGDFGYCDL 90
Score = 34.8 bits (80), Expect = 0.26
Identities = 8/52 (15%), Positives = 15/52 (28%), Gaps = 3/52 (5%)
Query: 983 NTDDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKH---CEVDIDECSSNPCH 1031
+ C+N + V Y F CE ++E + +
Sbjct: 55 SAVQLVENFCRNPDGDEEGVWCYVAGKPGDFGYCDLNYCEEAVEEETGDGLD 106
Score = 31.4 bits (71), Expect = 3.2
Identities = 9/108 (8%), Positives = 22/108 (20%), Gaps = 4/108 (3%)
Query: 266 DDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGG 325
N C+N +G+ Y + + + + G
Sbjct: 57 VQLVENFCRNPDGDEEGVWCYVAGKPGDFGYCDLNYCEEAVEEETGDGLDEDSDRAIEGA 116
Query: 326 FSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKT 373
+ + P A C + + ++
Sbjct: 117 TATSEYQTFFNPAT----FGSGEADCGLRPLFEKKSLEDKTERELLES 160
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular
matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2
g.3.11.5 PDB: 1h4u_A
Length = 285
Score = 44.8 bits (105), Expect = 2e-04
Identities = 16/83 (19%), Positives = 24/83 (28%), Gaps = 10/83 (12%)
Query: 301 QDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDR 360
C+ C A C + GF C CV +TG G C +
Sbjct: 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTG----------NGRQCVAEGSPQRV 52
Query: 361 VGSFYCQCTPGKTGLLCHLEDAC 383
G + G + + E+
Sbjct: 53 NGKVKGRIFVGSSQVPVVFENTD 75
Score = 38.6 bits (89), Expect = 0.016
Identities = 10/61 (16%), Positives = 16/61 (26%), Gaps = 4/61 (6%)
Query: 943 EDVDECQLSS-PCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDE 1001
C + C A C + + C C Y G + P + G
Sbjct: 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTG-NG--RQCVAEGSPQRVNGKVKGR 59
Query: 1002 V 1002
+
Sbjct: 60 I 60
Score = 38.6 bits (89), Expect = 0.017
Identities = 18/86 (20%), Positives = 27/86 (31%), Gaps = 11/86 (12%)
Query: 1089 NVNECES--HPCQNDGSCLDDPGTFRCVCMPGFT--GTQCETDIDECASNPCLNGGICND 1144
C + H C C D F C C+ +T G QC +P G
Sbjct: 4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQC-----VAEGSPQRVNGKVKG 58
Query: 1145 LINTFKCACPIGFTGS--HCQINIDD 1168
I P+ F + H + ++
Sbjct: 59 RIFVGSSQVPVVFENTDLHSYVVMNH 84
Score = 37.8 bits (87), Expect = 0.025
Identities = 16/111 (14%), Positives = 21/111 (18%), Gaps = 12/111 (10%)
Query: 1060 CEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSC------LDDPGTFRC 1113
C C + F C C +TG V E P F
Sbjct: 15 CSVHAECRDYATGFCCRCVANYTG-NGRQCVAEGSPQRVNGKVKGRIFVGSSQVPVVFEN 73
Query: 1114 VCMPGFTGTQ---CETDIDECASN--PCLNGGICNDLINTFKCACPIGFTG 1159
+ + T I L I + A
Sbjct: 74 TDLHSYVVMNHGRSYTAISTIPETVGYSLLPLAPIGGIIGWMFAVEQDGFK 124
Score = 37.8 bits (87), Expect = 0.029
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 1667 CHNNGTCVDKVGGFECRCPPGFVGS 1691
C + C D GF CRC + G+
Sbjct: 15 CSVHAECRDYATGFCCRCVANYTGN 39
Score = 36.7 bits (84), Expect = 0.054
Identities = 12/69 (17%), Positives = 17/69 (24%), Gaps = 10/69 (14%)
Query: 156 CEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEP 215
C C + F C C +TG C +GS G +
Sbjct: 15 CSVHAECRDYATGFCCRCVANYTG-NGRQ---------CVAEGSPQRVNGKVKGRIFVGS 64
Query: 216 GYTGQNCES 224
E+
Sbjct: 65 SQVPVVFEN 73
Score = 35.9 bits (82), Expect = 0.096
Identities = 15/61 (24%), Positives = 21/61 (34%), Gaps = 5/61 (8%)
Query: 1392 DIDECGSN--PCQHGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLV 1449
C +N C C D+ G+ C C YTG N + + P R G +
Sbjct: 4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYTG-NGRQCVAEG--SPQRVNGKVKGRI 60
Query: 1450 N 1450
Sbjct: 61 F 61
Score = 34.7 bits (79), Expect = 0.22
Identities = 20/97 (20%), Positives = 29/97 (29%), Gaps = 11/97 (11%)
Query: 185 NVNECES--HPCQNDGSCLDDPGTFRCVCMCEPGYT--GQNCESKYVPCDPSPCQNG--G 238
C + H C C D F C C+ YT G+ C ++ P + G
Sbjct: 4 AQQTCANNRHQCSVHAECRDYATGFCCRCV--ANYTGNGRQCVAEGSPQRVNGKVKGRIF 61
Query: 239 VCRELDNLNYECECQSGYRGKN---CEENIDDCPGNL 272
V + +E Y N I P +
Sbjct: 62 VGSSQVPVVFENTDLHSYVVMNHGRSYTAISTIPETV 98
Score = 34.7 bits (79), Expect = 0.23
Identities = 18/124 (14%), Positives = 25/124 (20%), Gaps = 18/124 (14%)
Query: 1316 NINECASN--PCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGL 1373
CA+N C+ C D GF C C Y P G + +
Sbjct: 4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGN---GRQCVAEGSPQRVNGKVKGRI 60
Query: 1374 N--------QFICHCKPGY---GGKRCEFDIDECGSN--PCQHGGICTDHLNGYTCECQI 1420
F Y R I + G+ +
Sbjct: 61 FVGSSQVPVVFENTDLHSYVVMNHGRSYTAISTIPETVGYSLLPLAPIGGIIGWMFAVEQ 120
Query: 1421 GYTG 1424
Sbjct: 121 DGFK 124
Score = 34.7 bits (79), Expect = 0.23
Identities = 20/121 (16%), Positives = 33/121 (27%), Gaps = 12/121 (9%)
Query: 1278 NINECYSN--PCRNGAKCVDGINRYSCECLPGYT--GLHCETNINECASNPCANGGVCVD 1333
C +N C A+C D + C C+ YT G C + N G + V
Sbjct: 4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCVAEGSPQRVNGKVKGRIFVG 63
Query: 1334 LIDG---FKCECPRGYY---DARCLSDVDECASD--PCLNGGTCEDGLNQFICHCKPGYG 1385
F+ Y R + + L G+ ++ +
Sbjct: 64 SSQVPVVFENTDLHSYVVMNHGRSYTAISTIPETVGYSLLPLAPIGGIIGWMFAVEQDGF 123
Query: 1386 G 1386
Sbjct: 124 K 124
Score = 34.7 bits (79), Expect = 0.25
Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 7/63 (11%)
Query: 1199 SCETNINDCASNPCHRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDL 1258
+C N + C+ + EC D F C C +TG +P + G+ +
Sbjct: 7 TCANNRHQCSVH----AECRDYATGFCCRCVANYTGN-GRQC--VAEGSPQRVNGKVKGR 59
Query: 1259 ING 1261
I
Sbjct: 60 IFV 62
Score = 32.8 bits (74), Expect = 0.97
Identities = 14/71 (19%), Positives = 19/71 (26%), Gaps = 3/71 (4%)
Query: 864 PINIDDCA--FKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTP 921
P+ CA C C D + C C YTG + Q + P R +
Sbjct: 2 PLAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTG-NGRQCVAEGSPQRVNGKVKGRI 60
Query: 922 SANFQDFACHC 932
Sbjct: 61 FVGSSQVPVVF 71
Score = 31.7 bits (71), Expect = 2.0
Identities = 13/60 (21%), Positives = 20/60 (33%), Gaps = 4/60 (6%)
Query: 75 QDHCASS--PCRNGAVCTSLEDTYECDCAPGFV--GQTCSEDIIECVDDPCVHGECFNTH 130
Q CA++ C A C + C C + G+ C + + V G F
Sbjct: 5 QQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCVAEGSPQRVNGKVKGRIFVGS 64
Score = 30.9 bits (69), Expect = 3.6
Identities = 17/80 (21%), Positives = 24/80 (30%), Gaps = 5/80 (6%)
Query: 342 NIDDCAGAA--CFNGATCIDRVGSFYCQCTPGKT--GLLCHLEDAC-TSNPCHADAICDT 396
CA C A C D F C+C T G C E + N I
Sbjct: 4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCVAEGSPQRVNGKVKGRIFVG 63
Query: 397 NPIINGSYTCSCASGYKGVN 416
+ + + + Y +N
Sbjct: 64 SSQVPVVFENTDLHSYVVMN 83
Score = 30.9 bits (69), Expect = 4.0
Identities = 14/74 (18%), Positives = 20/74 (27%), Gaps = 8/74 (10%)
Query: 261 CEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGD--LCEQDVDECSIRPSVCHNGAT 318
C N C + A C D + C C+A YTG+ C
Sbjct: 8 CANNRHQCSVH-----AECRDYATGFCCRCVANYTGNGRQC-VAEGSPQRVNGKVKGRIF 61
Query: 319 CTNSVGGFSCICVN 332
+S +
Sbjct: 62 VGSSQVPVVFENTD 75
Score = 30.9 bits (69), Expect = 4.3
Identities = 18/101 (17%), Positives = 28/101 (27%), Gaps = 16/101 (15%)
Query: 907 PCVPNRCQHGA-RCTPSANFQD----FACHCGVGWTGRYCNEDVDECQLSSPCRNGATCH 961
P C + +C+ A +D F C C +TG + C +
Sbjct: 2 PLAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGN-GRQ----------CVAEGSPQ 50
Query: 962 NTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEV 1002
NG G + D S+ N G +
Sbjct: 51 RVNGKVKGRIFVGSSQVPVVFENTDLHSYVVMNHGRSYTAI 91
Score = 30.9 bits (69), Expect = 4.3
Identities = 11/66 (16%), Positives = 15/66 (22%), Gaps = 12/66 (18%)
Query: 419 EDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPN 478
C C C D + C C YTG + Q + P
Sbjct: 3 LAQQTCANN-----------RHQCSVHAECRDYATGFCCRCVANYTG-NGRQCVAEGSPQ 50
Query: 479 SACVRC 484
+
Sbjct: 51 RVNGKV 56
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling
pathway, WNT antagonist, MO cancer, glycosaminoglycan;
HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Length = 188
Score = 41.8 bits (97), Expect = 7e-04
Identities = 21/106 (19%), Positives = 25/106 (23%), Gaps = 18/106 (16%)
Query: 1060 CEHDGTCVNTPGSFAC--NCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMP 1117
GT + C G + L P
Sbjct: 90 VPLLGTVPHXASVVQVGFPCLGXQDGVAAFEVDVIVM---NSEGNTILXTPQNAIF---- 142
Query: 1118 GFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQ 1163
+T C NGG CN C CP GF G HC+
Sbjct: 143 ------FKTCQQAECPGGCRNGGFCN---ERRICECPDGFHGPHCE 179
Score = 40.3 bits (93), Expect = 0.002
Identities = 20/90 (22%), Positives = 24/90 (26%), Gaps = 17/90 (18%)
Query: 930 CHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCAS 989
C G E + G T T + +
Sbjct: 107 FPCLGXQDGVAA----FEVDVIVMNSEGNTILXTPQNAIFFKTCQQAECPG--------- 153
Query: 990 FPCQNGGTCLDEVGDYSCLCVDGFSGKHCE 1019
C+NGG C C C DGF G HCE
Sbjct: 154 -GCRNGGFC---NERRICECPDGFHGPHCE 179
Score = 39.1 bits (90), Expect = 0.005
Identities = 21/109 (19%), Positives = 27/109 (24%), Gaps = 21/109 (19%)
Query: 156 CEHDGTCVNTPGSFAC--NCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMC 213
GT + C G + L P C
Sbjct: 90 VPLLGTVPHXASVVQVGFPCLGXQDGVAAFEVDVIVM---NSEGNTILXTPQNAIFFKTC 146
Query: 214 EPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCE 262
+ P C+NGG C N CEC G+ G +CE
Sbjct: 147 QQ------------AECPGGCRNGGFC----NERRICECPDGFHGPHCE 179
Score = 37.2 bits (85), Expect = 0.022
Identities = 16/92 (17%), Positives = 22/92 (23%), Gaps = 16/92 (17%)
Query: 1299 RYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDEC 1358
+ CL G+ + G +
Sbjct: 104 QVGFPCLGXQDGVAAFEVDVIV---MNSEGNTILXTPQNAIFFKTCQQA----------E 150
Query: 1359 ASDPCLNGGTCEDGLNQFICHCKPGYGGKRCE 1390
C NGG C + IC C G+ G CE
Sbjct: 151 CPGGCRNGGFC---NERRICECPDGFHGPHCE 179
Score = 37.2 bits (85), Expect = 0.025
Identities = 14/106 (13%), Positives = 21/106 (19%), Gaps = 17/106 (16%)
Query: 198 GSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYR 257
G+ + C G V G +
Sbjct: 94 GTVPHXASVVQVGFPCLGXQDGVAAFEVDVIVM---NSEGNTI-----------LXTPQN 139
Query: 258 GKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDV 303
+ C+NG C + C C + G CE
Sbjct: 140 AIFFKTCQQAECPGGCRNGGFC---NERRICECPDGFHGPHCEGTK 182
Score = 37.2 bits (85), Expect = 0.027
Identities = 18/114 (15%), Positives = 27/114 (23%), Gaps = 7/114 (6%)
Query: 112 DIIECVDDPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIA-GSPCEHDGTCVNTPGSFA 170
+ +D + N T + G V
Sbjct: 73 LSLRSLDXGIMADPTVNVPLLGTVPHXASVVQVGFPCLGXQDGVAAFEVDVIVMNSEGNT 132
Query: 171 CNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCES 224
T EC C+N G C + +C C G+ G +CE
Sbjct: 133 ILXTPQNAIFFKTCQQAECPGG-CRNGGFCNERR-----ICECPDGFHGPHCEG 180
Score = 36.8 bits (84), Expect = 0.033
Identities = 16/72 (22%), Positives = 18/72 (25%), Gaps = 4/72 (5%)
Query: 1057 GSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCM 1116
G V T EC C+N G C + C C
Sbjct: 115 GVAAFEVDVIVMNSEGNTILXTPQNAIFFKTCQQAECPGG-CRNGGFCNERR---ICECP 170
Query: 1117 PGFTGTQCETDI 1128
GF G CE
Sbjct: 171 DGFHGPHCEGTK 182
Score = 36.4 bits (83), Expect = 0.041
Identities = 22/108 (20%), Positives = 25/108 (23%), Gaps = 18/108 (16%)
Query: 1210 NPCHRGECIDGENSFTCA--CHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCK 1267
N G + C G G
Sbjct: 89 NVPLLGTVPHXASVVQVGFPCLGXQDGVAAFE---------VDVIVMNS---EGNTILXT 136
Query: 1268 PGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCET 1315
P + EC CRNG C R CEC G+ G HCE
Sbjct: 137 PQNAIFFKTCQQAEC-PGGCRNGGFCN---ERRICECPDGFHGPHCEG 180
Score = 36.0 bits (82), Expect = 0.055
Identities = 19/111 (17%), Positives = 24/111 (21%), Gaps = 10/111 (9%)
Query: 987 CASFPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNP-CHNGATCNQFQMIFIF 1045
+ P V C+ G E G T
Sbjct: 87 TVNVPLLGTVPHXASVVQVGFPCLGXQDGVAA----FEVDVIVMNSEGNTILXTPQNA-- 140
Query: 1046 FTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESH 1096
+ C + G C C C GF GP CE + H
Sbjct: 141 IFFKTCQQAECPGGCRNGGFCNERRI---CECPDGFHGPHCEGTKHHHHHH 188
Score = 35.7 bits (81), Expect = 0.072
Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
Query: 605 CTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHC 664
++ I + + C+NGGFC + C+CP G G HC
Sbjct: 123 VIVMNSEGNTILXTPQNAIFFKTCQQAECPGGCRNGGFCNER----RICECPDGFHGPHC 178
Query: 665 ELDSRNECY 673
E + +
Sbjct: 179 EGTKHHHHH 187
Score = 35.7 bits (81), Expect = 0.077
Identities = 14/75 (18%), Positives = 19/75 (25%), Gaps = 6/75 (8%)
Query: 1 CQNGGTCNVRQSPSYSPSFW--CSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDR 58
C + ++ + C NGG C +R
Sbjct: 109 CLGXQDGVAAFEVDVIVMNSEGNTILXTPQNAIFFKTCQQAECPGGCRNGGFCN----ER 164
Query: 59 YTCTCAPGFTGSQCE 73
C C GF G CE
Sbjct: 165 RICECPDGFHGPHCE 179
Score = 34.9 bits (79), Expect = 0.14
Identities = 15/101 (14%), Positives = 19/101 (18%), Gaps = 14/101 (13%)
Query: 1102 GSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSH 1161
G+ + + G
Sbjct: 94 GTVPHXASVVQVGFPCLGXQDGVAAFEVDVIVM-NSEGNTILX----------TPQNAIF 142
Query: 1162 CQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCET 1202
+ C NGG C CEC GF G CE
Sbjct: 143 FKTCQQAECPGGCRNGGFC---NERRICECPDGFHGPHCEG 180
Score = 34.9 bits (79), Expect = 0.16
Identities = 21/109 (19%), Positives = 28/109 (25%), Gaps = 18/109 (16%)
Query: 232 SPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCL 291
+ G V + C G E D G T + + +
Sbjct: 89 NVPLLGTVPHXASVVQVGFPCLGXQDGVAAFEV--DVIVM-NSEGNTILX--TPQNAIFF 143
Query: 292 ATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCS 340
T C P C NG C C C +G+ GP C
Sbjct: 144 KTCQQAEC----------PGGCRNGGFCNER---RICECPDGFHGPHCE 179
Score = 34.5 bits (78), Expect = 0.19
Identities = 14/61 (22%), Positives = 18/61 (29%), Gaps = 3/61 (4%)
Query: 50 TCTLKSLDRYTCTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTC 109
+ + + T P Q CRNG C C+C GF G C
Sbjct: 122 DVIVMNSEGNTILXTPQNAIFFKTCQQAECPGGCRNGGFCNE---RRICECPDGFHGPHC 178
Query: 110 S 110
Sbjct: 179 E 179
Score = 34.5 bits (78), Expect = 0.20
Identities = 14/66 (21%), Positives = 19/66 (28%), Gaps = 4/66 (6%)
Query: 1363 CLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGY 1422
P EC C++GG C + CEC G+
Sbjct: 118 AFEVDVIVMNSEGNTILXTPQNAIFFKTCQQAEC-PGGCRNGGFCNER---RICECPDGF 173
Query: 1423 TGINCE 1428
G +CE
Sbjct: 174 HGPHCE 179
Score = 31.8 bits (71), Expect = 1.3
Identities = 15/89 (16%), Positives = 20/89 (22%), Gaps = 16/89 (17%)
Query: 1263 QCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECAS 1322
C G G + +T
Sbjct: 106 GFPCLGXQDGVAAFEV---DVIVMNSEGNTI----------LXTPQNAIFFKTCQQAECP 152
Query: 1323 NPCANGGVCVDLIDGFKCECPRGYYDARC 1351
C NGG C + CECP G++ C
Sbjct: 153 GGCRNGGFCN---ERRICECPDGFHGPHC 178
Score = 31.8 bits (71), Expect = 1.4
Identities = 18/125 (14%), Positives = 26/125 (20%), Gaps = 13/125 (10%)
Query: 68 TGSQCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIECVDDPCVHGECF 127
+ + D + P + C G E + + G
Sbjct: 77 SLDXGIMADPTVNVPLLGTVPHXASVVQVGFPCLGXQDGVAAFEVDVIVM---NSEGNTI 133
Query: 128 NTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVN 187
C + G C C C GF GP CE +
Sbjct: 134 LXTPQNAIFFKTCQQAECPG-------GCRNGGFCNERRI---CECPDGFHGPHCEGTKH 183
Query: 188 ECESH 192
H
Sbjct: 184 HHHHH 188
Score = 31.4 bits (70), Expect = 2.0
Identities = 17/107 (15%), Positives = 25/107 (23%), Gaps = 9/107 (8%)
Query: 312 VCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPG 371
+ + +G G C D G A F + TP
Sbjct: 82 IMADPTVNVPLLGTVPHXASVVQVGFPCLGXQD---GVAAFEVDVIVMNSEGNTILXTPQ 138
Query: 372 KTGLLCHLEDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCS 418
+ A C C+ C C G+ G +C
Sbjct: 139 NAIFFKTCQQAECPGGCRNGGFCNERR------ICECPDGFHGPHCE 179
Score = 30.3 bits (67), Expect = 4.2
Identities = 13/76 (17%), Positives = 18/76 (23%), Gaps = 13/76 (17%)
Query: 874 PCRHGGTCIDLVNAYKCV--------CQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANF 925
PC + V P P C++G C
Sbjct: 108 PCLGXQDGVAAFEVDVIVMNSEGNTILXTPQNAIFFKTCQQAECPGGCRNGGFCNERRI- 166
Query: 926 QDFACHCGVGWTGRYC 941
C C G+ G +C
Sbjct: 167 ----CECPDGFHGPHC 178
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase,
glycoprotein, endoso growth factor, auto-inhibition; HET:
NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C*
2kv4_A 1jl9_A 1p9j_A 3njp_C*
Length = 53
Score = 38.3 bits (89), Expect = 7e-04
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 1356 DECASDPCLNGGTCE--DGLNQFICHCKPGYGGKRCEF 1391
CL+ G C + L+++ C+C GY G+RC++
Sbjct: 7 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY 44
Score = 37.1 bits (86), Expect = 0.002
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 45 CMNGGTC-TLKSLDRYTCTCAPGFTGSQCELQD 76
C++ G C +++LD+Y C C G+ G +C+ +D
Sbjct: 14 CLHDGVCMYIEALDKYACNCVVGYIGERCQYRD 46
Score = 35.6 bits (82), Expect = 0.008
Identities = 9/37 (24%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 1280 NECYSNPCRNGAKC--VDGINRYSCECLPGYTGLHCE 1314
+ C + C ++ +++Y+C C+ GY G C+
Sbjct: 7 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 43
Score = 34.8 bits (80), Expect = 0.015
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 221 NCESKYVPCDPSPCQNGGVCRELDNLN-YECECQSGYRGKNCEE 263
N +S+ C + GVC ++ L+ Y C C GY G+ C+
Sbjct: 1 NSDSECPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY 44
Score = 33.7 bits (77), Expect = 0.032
Identities = 10/41 (24%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 1125 ETDIDECASNPCLNGGICN--DLINTFKCACPIGFTGSHCQ 1163
+++ CL+ G+C + ++ + C C +G+ G CQ
Sbjct: 3 DSECPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 43
Score = 33.7 bits (77), Expect = 0.038
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 992 CQNGGTC--LDEVGDYSCLCVDGFSGKHCE 1019
C + G C ++ + Y+C CV G+ G+ C+
Sbjct: 14 CLHDGVCMYIEALDKYACNCVVGYIGERCQ 43
Score = 33.3 bits (76), Expect = 0.048
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 1394 DECGSNPCQHGGICT--DHLNGYTCECQIGYTGINCE 1428
C H G+C + L+ Y C C +GY G C+
Sbjct: 7 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 43
Score = 32.9 bits (75), Expect = 0.058
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 154 SPCEHDGTCVNTP--GSFACNCTQGFTGPRCE 183
C HDG C+ +ACNC G+ G RC+
Sbjct: 12 GYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 43
Score = 32.9 bits (75), Expect = 0.058
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 1058 SPCEHDGTCVNTP--GSFACNCTQGFTGPRCE 1087
C HDG C+ +ACNC G+ G RC+
Sbjct: 12 GYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 43
Score = 32.5 bits (74), Expect = 0.10
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 187 NECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESK 225
C +DG C+ + C C GY G+ C+ +
Sbjct: 7 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR 45
Score = 31.0 bits (70), Expect = 0.28
Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 1091 NECESHPCQNDGSC--LDDPGTFRCVCMPGFTGTQCE 1125
C +DG C ++ + C C+ G+ G +C+
Sbjct: 7 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 43
Score = 30.2 bits (68), Expect = 0.67
Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 1167 DDCVSSPCHNGGICK--DSIAGYTCECLAGFTGMSCE 1201
C + G+C +++ Y C C+ G+ G C+
Sbjct: 7 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 43
Score = 29.8 bits (67), Expect = 0.72
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 1660 PDCLPGACHNNGTC--VDKVGGFECRCPPGFVGSR 1692
P G C ++G C ++ + + C C G++G R
Sbjct: 7 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGER 41
Score = 29.4 bits (66), Expect = 0.97
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 1318 NECASNPCANGGVC--VDLIDGFKCECPRGYYDARC 1351
C + GVC ++ +D + C C GY RC
Sbjct: 7 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERC 42
Score = 29.0 bits (65), Expect = 1.5
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 522 NECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDL 562
C G ++ ++ Y CNC GY+G C+ +DL
Sbjct: 7 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRDL 47
Score = 28.7 bits (64), Expect = 1.9
Identities = 9/36 (25%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 631 DCDSNPCQNGGFCR-SKEGGGYRCDCPPGATGTHCE 665
C + G C + Y C+C G G C+
Sbjct: 8 LSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 43
Score = 28.7 bits (64), Expect = 1.9
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 260 NCEENIDDCPGNLCQNGATCM--DGINKYSCLCLATYTGDLCE 300
N + C + CM + ++KY+C C+ Y G+ C+
Sbjct: 1 NSDSECPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 43
Score = 27.9 bits (62), Expect = 3.9
Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 601 NGGVCTALD--GGHTCICPDNYSGRNCEY 627
+ GVC ++ + C C Y G C+Y
Sbjct: 16 HDGVCMYIEALDKYACNCVVGYIGERCQY 44
Score = 27.9 bits (62), Expect = 4.1
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 442 CRHGGTC--IDLVNAYKCVCQVPYTGHDCHQK 471
C H G C I+ ++ Y C C V Y G C +
Sbjct: 14 CLHDGVCMYIEALDKYACNCVVGYIGERCQYR 45
Score = 27.9 bits (62), Expect = 4.1
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 875 CRHGGTC--IDLVNAYKCVCQVPYTGHDCHQK 904
C H G C I+ ++ Y C C V Y G C +
Sbjct: 14 CLHDGVCMYIEALDKYACNCVVGYIGERCQYR 45
Score = 27.1 bits (60), Expect = 8.6
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 80 SSPCRNGAVCTSLED--TYECDCAPGFVGQTC 109
C + VC +E Y C+C G++G+ C
Sbjct: 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERC 42
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Length = 387
Score = 42.0 bits (97), Expect = 0.002
Identities = 25/147 (17%), Positives = 45/147 (30%), Gaps = 8/147 (5%)
Query: 1188 TCECLAGFTGMSCETNINDCASNPCHRGECIDGENSFTCACHPGFTGALCNTQLDECASN 1247
+ + G+ C S G+CI G C C G+T A N
Sbjct: 175 SSQKNVPPFGLDGVYISEPCPSYCSGHGDCISG----VCFCDLGYTAAQGTCV--SNTPN 228
Query: 1248 PCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVD--GINRYSCECL 1305
+ + E ++ + G GT C + G + ++ + +
Sbjct: 229 HSEMFDRFEGKLSPLWYKITGGQVGTGCGTLNDGRSLYFNGLGKREARTVPLDTRNIRLV 288
Query: 1306 PGYTGLHCETNINECASNPCANGGVCV 1332
Y + +T+ C N G+ V
Sbjct: 289 QFYIQIGSKTSGITCIKPRARNEGLVV 315
Score = 35.0 bits (79), Expect = 0.26
Identities = 16/112 (14%), Positives = 26/112 (23%), Gaps = 10/112 (8%)
Query: 1372 GLNQFICHCKPGYGGKRCEFDIDEC-----GSNPCQHGGICTDHLNGYTCECQIGYTGIN 1426
+F + F +D + C G C C C +GYT
Sbjct: 164 SKTRFRWIQESSSQKNVPPFGLDGVYISEPCPSYCSGHGDCISG----VCFCDLGYTAAQ 219
Query: 1427 CEINIDDCAFKPCRHGGTCIDLVNAYKCVCAKAGNHRCDDECNTIACHFDGN 1478
+ YK C + + +F+G
Sbjct: 220 GTCVSNTPNHSEMFDRFEGKLSPLWYKITGG-QVGTGCGTLNDGRSLYFNGL 270
Score = 31.2 bits (69), Expect = 3.9
Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 9/97 (9%)
Query: 284 NKYSCLCLATYTGDLCEQDVDECSIR---PSVCHNGATCTNSVGGFSCICVNGWTGPDCS 340
++ + ++ ++ +D I PS C C + V C C G+T +
Sbjct: 166 TRFRWIQESSSQKNVPPFGLDGVYISEPCPSYCSGHGDCISGV----CFCDLGYTAAQGT 221
Query: 341 LNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLC 377
+ + F+ ++ + + T G+ G C
Sbjct: 222 CVSNTPNHSEMFDRFEG--KLSPLWYKITGGQVGTGC 256
>3kg0_A Snoab; polyketide, anthracycline, oxygenase, cofactor-independent,
oxidoreductase; 1.70A {Streptomyces nogalater} PDB:
3kg1_A 3kng_A
Length = 128
Score = 39.3 bits (91), Expect = 0.002
Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 19/77 (24%)
Query: 1686 PGFVG----------------SRWTDAECFSNANEAADFLAASAAAHALSTTFP-IYRVR 1728
PGFV + WTD + F A FL + A ALST+ ++ R
Sbjct: 54 PGFVRHTLLRERDKDNSYVNIAVWTDHDAFRRALAQPGFLPHATALRALSTSEHGLFTAR 113
Query: 1729 GVSSAEYPPIDSPANVK 1745
+ + +
Sbjct: 114 QT--LPEGGDTTGSGHR 128
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein,
membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A
{Homo sapiens}
Length = 164
Score = 39.8 bits (93), Expect = 0.002
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 1282 CYSNPCRNGAKCVDGINRYSCECLPGYTGLHCE 1314
C C +CV+ IN Y+C C GY G C+
Sbjct: 122 CQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQ 154
Score = 37.9 bits (88), Expect = 0.012
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 7/58 (12%)
Query: 21 CSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYTCTCAPGFTGSQCELQDHC 78
C LC SC + C G C + ++ YTC C G+ G QC+
Sbjct: 109 CHKLKAA---LCYTA---SCQPWSCSGHGECV-EIINNYTCNCDVGYYGPQCQFVQVD 159
Score = 37.1 bits (86), Expect = 0.018
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 1358 CASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEF 1391
C C G C + +N + C+C GY G +C+F
Sbjct: 122 CQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQF 155
Score = 37.1 bits (86), Expect = 0.019
Identities = 18/73 (24%), Positives = 21/73 (28%), Gaps = 14/73 (19%)
Query: 209 CVCMCEPGYTGQ------NCESKY------VPCDPSPCQNGGVCRELDNLNYECECQSGY 256
CV + C C P C G C E NY C C GY
Sbjct: 90 CVEIYIKRNKDAGKWNDDACHKLKAALCYTASCQPWSCSGHGECVE-IINNYTCNCDVGY 148
Query: 257 RGKNCEENIDDCP 269
G C + + P
Sbjct: 149 YGPQC-QFVQVDP 160
Score = 36.3 bits (84), Expect = 0.031
Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Query: 1075 CNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCE 1125
C+ + C T C+ C G C++ + C C G+ G QC+
Sbjct: 109 CHKLKAAL---CYTAS--CQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQ 154
Score = 36.3 bits (84), Expect = 0.031
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 524 CLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCE 558
C CS HG CV+++NNY CNC GY G C+
Sbjct: 122 CQPWSCSGHGE--CVEIINNYTCNCDVGYYGPQCQ 154
Score = 36.3 bits (84), Expect = 0.032
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 1124 CETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQ 1163
C T C C G C ++IN + C C +G+ G CQ
Sbjct: 117 CYTAS--CQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQ 154
Score = 36.3 bits (84), Expect = 0.034
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 154 SPCEHDGTCVNTPGSFACNCTQGFTGPRCE 183
C G CV ++ CNC G+ GP+C+
Sbjct: 125 WSCSGHGECVEIINNYTCNCDVGYYGPQCQ 154
Score = 36.3 bits (84), Expect = 0.034
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 1058 SPCEHDGTCVNTPGSFACNCTQGFTGPRCE 1087
C G CV ++ CNC G+ GP+C+
Sbjct: 125 WSCSGHGECVEIINNYTCNCDVGYYGPQCQ 154
Score = 36.3 bits (84), Expect = 0.035
Identities = 19/71 (26%), Positives = 24/71 (33%), Gaps = 5/71 (7%)
Query: 1206 DCASNPCHRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCR 1265
DC R + N C LC C C G+C ++IN Y C
Sbjct: 89 DCVEIYIKRNKDAGKWNDDACHKLKAA---LC--YTASCQPWSCSGHGECVEIINNYTCN 143
Query: 1266 CKPGTSGTNCE 1276
C G G C+
Sbjct: 144 CDVGYYGPQCQ 154
Score = 36.3 bits (84), Expect = 0.035
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 14/64 (21%)
Query: 956 NGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEVGDYSCLCVDGFSG 1015
N CH LC T C + C G C++ + +Y+C C G+ G
Sbjct: 105 NDDACHKLKA-ALCY-------------TASCQPWSCSGHGECVEIINNYTCNCDVGYYG 150
Query: 1016 KHCE 1019
C+
Sbjct: 151 PQCQ 154
Score = 35.2 bits (81), Expect = 0.084
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 1389 CEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCE 1428
C C C G C + +N YTC C +GY G C+
Sbjct: 117 CY--TASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQ 154
Score = 34.8 bits (80), Expect = 0.13
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 1313 CETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARC 1351
C T C C+ G CV++I+ + C C GYY +C
Sbjct: 117 CYTAS--CQPWSCSGHGECVEIINNYTCNCDVGYYGPQC 153
Score = 34.8 bits (80), Expect = 0.13
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 1169 CVSSPCHNGGICKDSIAGYTCECLAGFTGMSCE 1201
C C G C + I YTC C G+ G C+
Sbjct: 122 CQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQ 154
Score = 34.4 bits (79), Expect = 0.14
Identities = 10/45 (22%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Query: 72 CELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSEDIIEC 116
C C C C + + Y C+C G+ G C + +
Sbjct: 117 CY-TASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQC-QFVQVD 159
Score = 34.0 bits (78), Expect = 0.21
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 1648 TSTLGIICEINVPDCLPGACHNNGTCVDKVGGFECRCPPGFVGSR 1692
+C C P +C +G CV+ + + C C G+ G +
Sbjct: 110 HKLKAALCYT--ASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQ 152
Score = 32.9 bits (75), Expect = 0.57
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 9/61 (14%)
Query: 171 CNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCD 230
C+ + C T C+ C G C++ + C C+ GY G C+ +V D
Sbjct: 109 CHKLKAAL---CYTAS--CQPWSCSGHGECVEIINNYTCN--CDVGYYGPQCQ--FVQVD 159
Query: 231 P 231
P
Sbjct: 160 P 160
Score = 32.5 bits (74), Expect = 0.63
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 307 SIRPSVCHNGATCTNSVGGFSCICVNGWTGPDC 339
S +P C C + ++C C G+ GP C
Sbjct: 121 SCQPWSCSGHGECVEIINNYTCNCDVGYYGPQC 153
Score = 32.5 bits (74), Expect = 0.64
Identities = 9/29 (31%), Positives = 10/29 (34%)
Query: 952 SPCRNGATCHNTNGSYLCECAKGYEGRDC 980
C C +Y C C GY G C
Sbjct: 125 WSCSGHGECVEIINNYTCNCDVGYYGPQC 153
Score = 32.1 bits (73), Expect = 0.85
Identities = 10/35 (28%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 632 CDSNPCQNGGFCRSKEGGGYRCDCPPGATGTHCEL 666
C C G C Y C+C G G C+
Sbjct: 122 CQPWSCSGHGECVEI-INNYTCNCDVGYYGPQCQF 155
Score = 32.1 bits (73), Expect = 0.86
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Query: 261 CEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDE 305
C C C C++ IN Y+C C Y G C+ +
Sbjct: 117 CY--TASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQFVQVD 159
Score = 31.7 bits (72), Expect = 1.2
Identities = 12/40 (30%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Query: 664 CELDSRNECYSNPCQHAGTCEDRIADYACYCLPMWNGKNC 703
C S C C G C + I +Y C C + G C
Sbjct: 117 CYTAS---CQPWSCSGHGECVEIINNYTCNCDVGYYGPQC 153
Score = 30.5 bits (69), Expect = 2.7
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Query: 904 KLDPCVPNRCQHGARCTPSANFQDFACHCGVGWTGRYCNEDVDEC 948
C P C C N ++ C+C VG+ G C + V
Sbjct: 118 YTASCQPWSCSGHGECVEIIN--NYTCNCDVGYYGPQC-QFVQVD 159
Score = 29.8 bits (67), Expect = 5.1
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 430 CEINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDC 468
C C C G C++++N Y C C V Y G C
Sbjct: 117 CYT--ASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQC 153
Score = 29.8 bits (67), Expect = 6.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 870 CAFKPCRHGGTCIDLVNAYKCVCQVPYTGHDC 901
C C G C++++N Y C C V Y G C
Sbjct: 122 CQPWSCSGHGECVEIINNYTCNCDVGYYGPQC 153
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR
{Homo sapiens} SCOP: g.3.11.1
Length = 53
Score = 36.7 bits (85), Expect = 0.003
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 11/49 (22%)
Query: 943 EDVDECQLSSPCRNGA-------TCHNTNGSYLCECAKGYE----GRDC 980
D+DEC S CHN G Y C C GYE C
Sbjct: 2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50
Score = 32.0 bits (73), Expect = 0.13
Identities = 14/63 (22%), Positives = 20/63 (31%), Gaps = 22/63 (34%)
Query: 1020 VDIDECSSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQ 1079
VD+DEC+S C+H C N G + C+C
Sbjct: 2 VDLDECASRSKSGEED--------------------PQPQCQH--LCHNYVGGYFCSCRP 39
Query: 1080 GFT 1082
G+
Sbjct: 40 GYE 42
Score = 30.1 bits (68), Expect = 0.58
Identities = 8/26 (30%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Query: 153 GSPCEHDGTCVNTPGSFACNCTQGFT 178
C+H C N G + C+C G+
Sbjct: 19 QPQCQH--LCHNYVGGYFCSCRPGYE 42
Score = 29.3 bits (66), Expect = 1.1
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 10/51 (19%)
Query: 520 DINECLSNP--CSSHGTLDCVQLVNN----YHCNCRPGYM----GRHCEVK 560
D++EC S C L +N Y C+CRPGY C+ +
Sbjct: 3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQAE 53
Score = 28.6 bits (64), Expect = 2.1
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 12/42 (28%)
Query: 1392 DIDECGSN----------PCQHGGICTDHLNGYTCECQIGYT 1423
D+DEC S CQH +C +++ GY C C+ GY
Sbjct: 3 DLDECASRSKSGEEDPQPQCQH--LCHNYVGGYFCSCRPGYE 42
Score = 28.6 bits (64), Expect = 2.6
Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 6/40 (15%)
Query: 302 DVDECSIRPSVCHNGA------TCTNSVGGFSCICVNGWT 335
D+DEC+ R C N VGG+ C C G+
Sbjct: 3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYE 42
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone
receptor/immune system complex; 3.80A {Homo sapiens}
SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1
PDB: 3loh_E
Length = 897
Score = 41.4 bits (96), Expect = 0.004
Identities = 35/227 (15%), Positives = 61/227 (26%), Gaps = 25/227 (11%)
Query: 142 FTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCL 201
+ W I S ++ + P C + N
Sbjct: 127 YLATIDWSRILDSVEDNHIVLNKDDNEECGDI-----CPGTAKGKTNCPA-TVINGQFVE 180
Query: 202 DDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNC 261
C +C C ++ + C C C + D+ C++ Y C
Sbjct: 181 RCWTHSHCQKVCPTICKSHGCTAEGLCCHSE-CLGN--CSQPDDPTKCVACRNFYLDGRC 237
Query: 262 EENIDDCP-------GNLCQNGATCMDGINKYSCLCLATYTGDLCE--QDVDECSIRPSV 312
++ CP C N + C D +K + + + EC ++
Sbjct: 238 ---VETCPPPYYHFQDWRCVNFSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGYTM 294
Query: 313 CHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCID 359
+ CT +G C + ID A G T I+
Sbjct: 295 NSSNLLCTPCLG----PCPKVCHLLEGEKTIDSVTSAQELRGCTVIN 337
Score = 32.2 bits (72), Expect = 2.3
Identities = 24/140 (17%), Positives = 37/140 (26%), Gaps = 17/140 (12%)
Query: 1426 NCEINIDDCAFKPCRHGGTCIDLVNAYKCVCAKAGNHRCDDECNTIACHFDGNDCSL--- 1482
C A T I+ +C C C + C +G C
Sbjct: 154 ECGDICPGTAKGKTNCPATVINGQFVERCWTHSHCQKVCPTICKSHGCTAEGLCCHSECL 213
Query: 1483 ----GINPWINCTANINCWEVFMNGRCDEVC------NNPQCLFDGRDCEKNLQPCNPIY 1532
+ C A C +++GRC E C + C+ C
Sbjct: 214 GNCSQPDDPTKCVA---CRNFYLDGRCVETCPPPYYHFQDWRCVNFSFCQDLHHKCKNSR 270
Query: 1533 DAYCQKHYA-NGHCDYSCNN 1551
C ++ N C C +
Sbjct: 271 RQGCHQYVIHNNKCIPECPS 290
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 41.0 bits (95), Expect = 0.005
Identities = 30/224 (13%), Positives = 56/224 (25%), Gaps = 67/224 (29%)
Query: 1687 GFVGSRWTDAECFSNANEAADFLAASAAAHALSTTFPIYRVRGVSSAEYPPIDSPANVKY 1746
F+ S E + + L ++ VS + P ++
Sbjct: 92 KFLMSPIK-TEQRQPSMMTRMY---IEQRDRLYNDNQVFAKYNVSRLQ--PYL---KLRQ 142
Query: 1747 VLM------GVFL--MMLVG---LLLGVL--VTTQRKRSHGITWFPEGFLRNNSGPRRQD 1793
L+ V + ++ G + L V Q K I W N
Sbjct: 143 ALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWL-------NLKNCNSP 195
Query: 1794 DLSLENTERNGSYLCECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTALHWAAA 1853
+ LE ++ L I+ + + +D N+ +H
Sbjct: 196 ETVLEMLQK----LLY----------QIDPNWTS----RSDHSSNIKLR-----IHSI-- 230
Query: 1854 VNNIDAVNILLSHGVNPREGSYGACKAL--LDNFANREITDHMD 1895
+ LL L L N N + + +
Sbjct: 231 ---QAELRRLLKSKPYEN--------CLLVLLNVQNAKAWNAFN 263
Score = 40.6 bits (94), Expect = 0.006
Identities = 34/269 (12%), Positives = 71/269 (26%), Gaps = 77/269 (28%)
Query: 794 CDEVCNNPQCLFDGRDCEKNLQPCNPIYDGRLLFSQL---------NFARD-HDPGVWLM 843
C +V + P+ + + + + + + LF L F +
Sbjct: 35 CKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN---- 90
Query: 844 Y-FLYSAITIRRKLKPL------QQQQPINIDDCAFKPCRHGGTCIDLVNAYKCVCQVPY 896
Y FL S I ++ + +Q+ + D+ F + V+ + ++
Sbjct: 91 YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK-YN-------VSRLQPYLKL-- 140
Query: 897 TGHDCHQKLDPCVPNRCQHGAR-----CTPSANFQDFACHC----GVGW-TGRYCNEDVD 946
+L P N G + C + W + CN
Sbjct: 141 --RQALLELRP-AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPET 197
Query: 947 E-------CQLSSPCRNGATCHNTNGSYLCECAKGYEGR--------DCLINTDDCASFP 991
P + H++N + R +CL+
Sbjct: 198 VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL--------- 248
Query: 992 CQNGGTCLDEVGDYSCLCVDGFSGKHCEV 1020
L V + + F+ C++
Sbjct: 249 ------VLLNVQNAK--AWNAFNLS-CKI 268
Score = 36.0 bits (82), Expect = 0.18
Identities = 40/348 (11%), Positives = 90/348 (25%), Gaps = 108/348 (31%)
Query: 1339 KCECPRG--------YYDARC-LSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRC 1389
C P Y + + +S+ L + + L + + Y + C
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS--KPY--ENC 246
Query: 1390 EFDIDECGSNPCQHGGICT-DHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDL 1448
+ + N + C+I T ++ D + H I L
Sbjct: 247 LLVLLN----------VQNAKAWNAFNLSCKILLTTRFKQV-TDFLSAATTTH----ISL 291
Query: 1449 VNAYKC--------VCAKAGNHRCDD---ECNTIACHFDGNDCSLGINP------WINCT 1491
+ + K + R D E NP +
Sbjct: 292 DHHSMTLTPDEVKSLLLKYLDCRPQDLPRE----VL---------TTNPRRLSIIAESIR 338
Query: 1492 ANINCWEVFMNGRCDEVCNNPQCLFDGRDCEKNLQPCNPIYDAYCQKHYANGHCDYSC-- 1549
+ W+ + + CD++ + + L+P A +K +
Sbjct: 339 DGLATWDNWKHVNCDKLTT----IIE--SSLNVLEP------AEYRKMF------DRLSV 380
Query: 1550 --NNA-------ECNWDGLDCEREPPSLADGAISIIVLMDMQMFKQNKVSFLRELGHEL- 1599
+A W + + + + + L + ++ + +
Sbjct: 381 FPPSAHIPTILLSLIWFDVI-KSDVMVVVNK------LHKYSLVEKQPKESTISI-PSIY 432
Query: 1600 -RATVRIKQEPTGHEMI---------YQHGGICTDHLNGYTCECQIGY 1637
V+++ E H I + + +L+ Y IG+
Sbjct: 433 LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS-HIGH 479
Score = 34.4 bits (78), Expect = 0.52
Identities = 19/113 (16%), Positives = 33/113 (29%), Gaps = 9/113 (7%)
Query: 1818 DCLINTDDCASYLINADAD--INVPDNSGKT-ALHWAAAVNNIDAVNILLSHGVNPREGS 1874
DC D S L + D I D T L W + V + + +
Sbjct: 34 DCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRI---N 90
Query: 1875 YGACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHIPRSPQMVSV 1927
Y L+ + M +RL++D ++ R + +
Sbjct: 91 YKF---LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL 140
Score = 33.7 bits (76), Expect = 0.84
Identities = 33/207 (15%), Positives = 56/207 (27%), Gaps = 56/207 (27%)
Query: 451 LVNAYKCVCQVP------YTGHDCHQKLDPCVPNSACVRCLTPG-------MIVIRSWIL 497
L++ K + P Y + +L N + + +R +L
Sbjct: 94 LMSPIKTEQRQPSMMTRMYI--EQRDRLY----ND--NQVFAKYNVSRLQPYLKLRQALL 145
Query: 498 VYRTERMVIDFGMKHIG------SRCEGDINEC----------LSNPCSSHGTLD----- 536
R + V+ G+ G C +C L N S L+
Sbjct: 146 ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205
Query: 537 CVQLVNNYHCNCRPGYMGRHCEVKDLAVKVTSMNASPTLAP-LTVL--------WIAYNW 587
Q+ N+ + + + ++ + S L VL W A+N
Sbjct: 206 LYQIDPNWTSRSDHSSNIKL-RIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL 264
Query: 588 STTTTATAALATWNGGVCTALDGGHTC 614
S T T V L T
Sbjct: 265 SCKILLT----TRFKQVTDFLSAATTT 287
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA
MAN; 2.00A {Homo sapiens}
Length = 424
Score = 40.3 bits (94), Expect = 0.005
Identities = 17/102 (16%), Positives = 30/102 (29%), Gaps = 9/102 (8%)
Query: 1298 NRYSCECLPGYTG-------LHCETNINECASNPCANGGVCV--DLIDGFKCECPRGYYD 1348
+ SC+ + Y L+ + C+ C+ G CV +
Sbjct: 310 TKESCQAIKEYMDTTLGPFILNVTSGALLCSQALCSGHGRCVRRTSHPKALLLLNPASFS 369
Query: 1349 ARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCE 1390
+ + L+ +F C C PG+ CE
Sbjct: 370 IQLTPGGGPLSLRGALSLEDQAQMAVEFKCRCYPGWQAPWCE 411
Score = 37.3 bits (86), Expect = 0.050
Identities = 13/80 (16%), Positives = 21/80 (26%), Gaps = 2/80 (2%)
Query: 1086 CETNVNECESHPCQNDGSCLDDPG--TFRCVCMPGFTGTQCETDIDECASNPCLNGGICN 1143
+ C C G C+ + P Q + L+
Sbjct: 332 VTSGALLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQA 391
Query: 1144 DLINTFKCACPIGFTGSHCQ 1163
+ FKC C G+ C+
Sbjct: 392 QMAVEFKCRCYPGWQAPWCE 411
Score = 36.1 bits (83), Expect = 0.11
Identities = 11/75 (14%), Positives = 17/75 (22%), Gaps = 2/75 (2%)
Query: 1242 DECASNPCQFGGQC--EDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINR 1299
C+ C G+C P + +
Sbjct: 337 LLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVE 396
Query: 1300 YSCECLPGYTGLHCE 1314
+ C C PG+ CE
Sbjct: 397 FKCRCYPGWQAPWCE 411
Score = 34.9 bits (80), Expect = 0.26
Identities = 11/82 (13%), Positives = 23/82 (28%), Gaps = 1/82 (1%)
Query: 182 CETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCR 241
+ C C G C+ + + + P P +
Sbjct: 332 VTSGALLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQA 391
Query: 242 ELDNLNYECECQSGYRGKNCEE 263
++ ++C C G++ CE
Sbjct: 392 QMAV-EFKCRCYPGWQAPWCER 412
Score = 33.4 bits (76), Expect = 0.72
Identities = 9/64 (14%), Positives = 15/64 (23%), Gaps = 9/64 (14%)
Query: 889 KCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANF---------QDFACHCGVGWTGR 939
+CV + + G + +F C C GW
Sbjct: 349 RCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVEFKCRCYPGWQAP 408
Query: 940 YCNE 943
+C
Sbjct: 409 WCER 412
Score = 32.6 bits (74), Expect = 1.2
Identities = 16/86 (18%), Positives = 20/86 (23%), Gaps = 14/86 (16%)
Query: 1023 DECSSNPCHNGATCN------------QFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTP 1070
CS C C I T + G+ D +
Sbjct: 337 LLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAV- 395
Query: 1071 GSFACNCTQGFTGPRCETNVNECESH 1096
F C C G+ P CE H
Sbjct: 396 -EFKCRCYPGWQAPWCERKSMWTGHH 420
Score = 32.6 bits (74), Expect = 1.2
Identities = 12/86 (13%), Positives = 19/86 (22%), Gaps = 2/86 (2%)
Query: 1345 GYYDARCLSDVDECASDPCLNGGTC--EDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQ 1402
G + S C+ C G C + + P +
Sbjct: 326 GPFILNVTSGALLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGAL 385
Query: 1403 HGGICTDHLNGYTCECQIGYTGINCE 1428
+ C C G+ CE
Sbjct: 386 SLEDQAQMAVEFKCRCYPGWQAPWCE 411
Score = 32.2 bits (73), Expect = 1.8
Identities = 11/74 (14%), Positives = 15/74 (20%), Gaps = 2/74 (2%)
Query: 632 CDSNPCQNGGFC-RSKEGGGYRCDCPPGATGTHCELDSRNECYSNPCQHAGTCEDRIADY 690
C C G C R P + ++
Sbjct: 339 CSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGG-PLSLRGALSLEDQAQMAVEF 397
Query: 691 ACYCLPMWNGKNCD 704
C C P W C+
Sbjct: 398 KCRCYPGWQAPWCE 411
Score = 31.5 bits (71), Expect = 2.8
Identities = 14/80 (17%), Positives = 19/80 (23%)
Query: 260 NCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATC 319
N C LC C+ + L L + + +
Sbjct: 331 NVTSGALLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQ 390
Query: 320 TNSVGGFSCICVNGWTGPDC 339
F C C GW P C
Sbjct: 391 AQMAVEFKCRCYPGWQAPWC 410
Score = 31.1 bits (70), Expect = 3.9
Identities = 12/74 (16%), Positives = 18/74 (24%), Gaps = 3/74 (4%)
Query: 1167 DDCVSSPCHNGGIC--KDSIAGYTCECLAG-FTGMSCETNINDCASNPCHRGECIDGENS 1223
C + C G C + S F+ +
Sbjct: 337 LLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVE 396
Query: 1224 FTCACHPGFTGALC 1237
F C C+PG+ C
Sbjct: 397 FKCRCYPGWQAPWC 410
Score = 29.9 bits (67), Expect = 9.0
Identities = 9/74 (12%), Positives = 16/74 (21%), Gaps = 1/74 (1%)
Query: 229 CDPSPCQNGGVC-RELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYS 287
C + C G C R + + ++
Sbjct: 339 CSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVEFK 398
Query: 288 CLCLATYTGDLCEQ 301
C C + CE+
Sbjct: 399 CRCYPGWQAPWCER 412
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich
domain EGF ATP-binding, kinase, nucleotide-binding,
receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Length = 58
Score = 36.1 bits (83), Expect = 0.006
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 34 IPVANSCDSFPCMNGGTCT---LKSLDRYTCTCAPGFTGSQCELQD 76
+ D++ C+N C + L Y+C CA GF G +CE ++
Sbjct: 5 YKCPETFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKE 50
Score = 36.1 bits (83), Expect = 0.006
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
Query: 1356 DECASDPCLNGGTC----EDGLNQFICHCKPGYGGKRCEF 1391
+ + CLN C L + C C G+ G+RCE+
Sbjct: 9 ETFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48
Score = 32.6 bits (74), Expect = 0.091
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
Query: 152 AGSPCEHDGTCVNTPGS----FACNCTQGFTGPRCET 184
C +D C + ++C C GF G RCE
Sbjct: 12 DAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48
Score = 32.6 bits (74), Expect = 0.091
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
Query: 1056 AGSPCEHDGTCVNTPGS----FACNCTQGFTGPRCET 1088
C +D C + ++C C GF G RCE
Sbjct: 12 DAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48
Score = 32.6 bits (74), Expect = 0.11
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 228 PCDPSPCQNGGVC---RELDNLNYECECQSGYRGKNCE 262
D C N C + D Y CEC G+ G+ CE
Sbjct: 10 TFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47
Score = 31.4 bits (71), Expect = 0.27
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 984 TDDCASFPCQNGGTC----LDEVGDYSCLCVDGFSGKHCE 1019
+ ++ C N C + ++ YSC C GF G+ CE
Sbjct: 8 PETFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47
Score = 30.3 bits (68), Expect = 0.56
Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 1129 DECASNPCLNGGICNDL----INTFKCACPIGFTGSHCQ 1163
+ + CLN C + + + C C IGF G C+
Sbjct: 9 ETFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47
Score = 29.1 bits (65), Expect = 1.6
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Query: 76 DHCASSPCRNGAVCTSLEDT----YECDCAPGFVGQTC 109
+ + C N A C +++ Y C+CA GF+GQ C
Sbjct: 9 ETFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRC 46
Score = 28.7 bits (64), Expect = 2.2
Identities = 15/65 (23%), Positives = 22/65 (33%), Gaps = 15/65 (23%)
Query: 612 HTCICPDNYSGRNCEYFGYDCDSNPCQNGGFC---RSKEGGGYRCDCPPGATGTHCELDS 668
T CP+ + D+ C N C + + Y C+C G G CE
Sbjct: 3 PTYKCPETF------------DAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKE 50
Query: 669 RNECY 673
+ Y
Sbjct: 51 IDNTY 55
Score = 28.7 bits (64), Expect = 2.4
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Query: 1394 DECGSNPCQHGGICTDH----LNGYTCECQIGYTGINCEINIDDCAFKP 1438
+ + C + C L Y+CEC IG+ G CE D + P
Sbjct: 9 ETFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKEIDNTYLP 57
Score = 28.3 bits (63), Expect = 3.0
Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Query: 1167 DDCVSSPCHNGGIC----KDSIAGYTCECLAGFTGMSCET 1202
+ + C N C + Y+CEC GF G CE
Sbjct: 9 ETFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48
Score = 28.3 bits (63), Expect = 3.5
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 1285 NPCRNGAKC----VDGINRYSCECLPGYTGLHCET 1315
C N A C + + YSCEC G+ G CE
Sbjct: 14 WYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48
Score = 28.0 bits (62), Expect = 3.9
Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 4/35 (11%)
Query: 1321 ASNPCANGGVCVDLIDG----FKCECPRGYYDARC 1351
+ C N C + + CEC G+ RC
Sbjct: 12 DAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRC 46
Score = 28.0 bits (62), Expect = 4.0
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Query: 1094 ESHPCQNDGSC----LDDPGTFRCVCMPGFTGTQCET 1126
++ C ND C + D + C C GF G +CE
Sbjct: 12 DAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48
Score = 27.6 bits (61), Expect = 5.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 544 YHCNCRPGYMGRHCEVKDL 562
Y C C G+MG+ CE K++
Sbjct: 33 YSCECAIGFMGQRCEYKEI 51
Score = 27.2 bits (60), Expect = 7.9
Identities = 12/49 (24%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Query: 266 DDCPGNLCQNGATCM----DGINKYSCLCLATYTGDLCEQDVDECSIRP 310
+ C N A C + YSC C + G CE + + P
Sbjct: 9 ETFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKEIDNTYLP 57
Score = 26.8 bits (59), Expect = 9.6
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 381 DACTSNPCHADAICDTNPIINGS-YTCSCASGYKGVNC 417
+ + C DA C I + Y+C CA G+ G C
Sbjct: 9 ETFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRC 46
>2ahx_A P180ERBB4, receptor tyrosine-protein kinase ERBB-4; X-RAY
crystallography, neuregulins, heparin-binding, cell CY
signaling protein; HET: NAG NDG; 2.40A {Homo sapiens}
PDB: 3u2p_A*
Length = 617
Score = 40.4 bits (93), Expect = 0.007
Identities = 43/395 (10%), Positives = 75/395 (18%), Gaps = 11/395 (2%)
Query: 1160 SHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRGECID 1219
+ + + ++ C + C +
Sbjct: 170 TGRCWGPTENHCQTLTRTVCAEQCDGRCYGPYVSDCCHRECAGGCSGPKDTDCFACMNFN 229
Query: 1220 GENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEINI 1279
+ C F QL+ + +G C +C ++C
Sbjct: 230 DSGACVTQCPQTFVYNPTTFQLEHNFNAKYTYGAFCVK-----KCPHNFVVDSSSCVRAC 284
Query: 1280 NECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFK 1339
NG K + G + +SN I+G
Sbjct: 285 PSSKMEVEENGIKMCKPCTDICPKACDGIGTGSLMSAQTVDSSNIDKFINCTK--INGNL 342
Query: 1340 CECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSN 1399
G + + + E I P ++ G
Sbjct: 343 IFLVTGIHGDPYNAIEAIDPEKLNVFRTVREITGFLNIQSWPPNMTDFSVFSNLVTIGGR 402
Query: 1400 PCQHGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCAKA 1459
G Q NI + T
Sbjct: 403 VLYSGLSLLILKQQGITSLQFQSLKEISAGNIYITDNSNLCYYHTINWTTLFSTINQRIV 462
Query: 1460 GNHRCDDECNTIACHFDGNDCSLGINPWINCTANINCWEVFMNGRCDEVCNNPQCLFDGR 1519
E T + CS ++C C E CN F
Sbjct: 463 IRDNRKAENCTAEGMVCNHLCSSDGCWGPGPDQCLSCRRFSRGRICIESCNLYDGEFREF 522
Query: 1520 DCEKNLQPCNPIYDAYCQKHYANGHCDYSCNNAEC 1554
+ + C+P C+K + C
Sbjct: 523 ENDSICVECDP----QCEKMEDGLLTCHGPGPDNC 553
Score = 34.2 bits (77), Expect = 0.55
Identities = 50/414 (12%), Positives = 89/414 (21%), Gaps = 14/414 (3%)
Query: 1153 CPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPC 1212
F I+ D V +P + + C C +
Sbjct: 126 DQNKFLCYADTIHWQDIVRNPWPSNLTLVSTNGSSGCGRCHKSCTGRCWGPTENHCQTLT 185
Query: 1213 HRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQC--RCKPGT 1270
+ C C C + + C +C
Sbjct: 186 RTVCAEQCDGRCYGPYVSDCCHRECAGGCSGPKDTDCF---ACMNFNDSGACVTQCPQTF 242
Query: 1271 SGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGV 1330
+ ++ GA CV C C NG
Sbjct: 243 VYNPTTFQLEHNFNAKYTYGAFCVK-----KCPHNFVVDSSSCVRACPSSKMEVEENGIK 297
Query: 1331 CVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCE 1390
+ G +S +S+ + N
Sbjct: 298 MCKPCTDICPKACDGIGTGSLMSAQTVDSSNIDKFINCTKINGNLIFLVTGIHGDPYNAI 357
Query: 1391 FDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLVN 1450
ID N + T LN + T + N+ + G + + L
Sbjct: 358 EAIDPEKLNVFRTVREITGFLNIQSWPPN--MTDFSVFSNLVTIGGRVLYSGLSLLILKQ 415
Query: 1451 AYKCVCAKAGNHRCDDECNTIACHFDGNDCSLGINPWINCTANINCWEVFMNGRCDEVCN 1510
+ + + + I + N C W + IN V + R E C
Sbjct: 416 --QGITSLQFQSLKEISAGNIYITDNSNLCYYHTINWTTLFSTINQRIVIRDNRKAENCT 473
Query: 1511 NPQCLFDGRDCEKNLQPCNPIYDAYCQKHYANGHCDYSCNNAECNWDGLDCERE 1564
+ + P C++ C SCN + + + +
Sbjct: 474 AEGMVCNHLCSSDGCWGPGPDQCLSCRRFSRGRICIESCNLYDGEFREFENDSI 527
Score = 31.9 bits (71), Expect = 2.8
Identities = 45/438 (10%), Positives = 92/438 (21%), Gaps = 8/438 (1%)
Query: 1040 QMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQ 1099
Q F+ + + W I +P + T V+T GS C RC E
Sbjct: 127 QNKFLCYADTIHWQDIVRNPWPSNLTLVSTNGSSGCGRCHKSCTGRC-WGPTENHCQTLT 185
Query: 1100 NDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKC--ACPIGF 1157
G + +C C C + ++ C CP F
Sbjct: 186 RTVCAEQCDGRCYGPYVSDCCHRECAGGCSGPKDTDCFA---CMNFNDSGACVTQCPQTF 242
Query: 1158 TGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRGEC 1217
+ ++ ++ G C + +C ++ + N +
Sbjct: 243 VYNPTTFQLEHNFNAKYTYGAFCVKKCPHNFV-VDSSSCVRACPSSKMEVEENGIKMCKP 301
Query: 1218 IDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEI 1277
C + T +LI +
Sbjct: 302 CTDICPKACDGIGTGSLMSAQTVDSSNIDKFINCTKINGNLIFLVTGIHGDPYNAIEAID 361
Query: 1278 NINECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDG 1337
R ++ I + + T + + + I
Sbjct: 362 PEKLNVFRTVREITGFLN-IQSWPPNMTDFSVFSNLVTIGGRVLYSGLSLLILKQQGITS 420
Query: 1338 FKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECG 1397
+ + + + T + + C + C
Sbjct: 421 LQFQSLKEISAGNIYITDNSNLCYYHTINWTTLFSTINQRIVIRDNRKAENCTAEGMVCN 480
Query: 1398 SNPCQHGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCA 1457
G +C N+ D F+ + C++ + +
Sbjct: 481 HLCSSDGCWGPGPDQCLSCRRFSRGRICIESCNLYDGEFREFENDSICVECDPQCEKMED 540
Query: 1458 KAGNHRCDDECNTIACHF 1475
N C
Sbjct: 541 GLLTCHGPGPDNCTKCSH 558
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion;
HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Length = 217
Score = 38.8 bits (90), Expect = 0.008
Identities = 33/166 (19%), Positives = 42/166 (25%), Gaps = 46/166 (27%)
Query: 1274 NCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVD 1333
C + C GI C C GY G +CE
Sbjct: 85 ECRCRDQSRDRSLCHGKGFLECGI----CRCDTGYIGKNCE------------------- 121
Query: 1334 LIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYG------GK 1387
C+ S + S C G C G C C G+
Sbjct: 122 ------CQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVPGKLIYGQ 171
Query: 1388 RCEFDIDECGSNPCQHGGICTDHLNG----YTCECQIGYTGINCEI 1429
CE D C +G +C G C C G+ G C+
Sbjct: 172 YCECDTINC---ERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQH 214
Score = 37.3 bits (86), Expect = 0.028
Identities = 25/123 (20%), Positives = 33/123 (26%), Gaps = 17/123 (13%)
Query: 154 SPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNE-------------CESHPCQNDGSC 200
S C G C C G+ G CE S C G C
Sbjct: 96 SLCHGKGFLECG----ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDC 151
Query: 201 LDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKN 260
+ + GQ CE + C+ Q G +C C G+ G
Sbjct: 152 VCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSA 211
Query: 261 CEE 263
C+
Sbjct: 212 CQH 214
Score = 36.5 bits (84), Expect = 0.047
Identities = 33/153 (21%), Positives = 42/153 (27%), Gaps = 27/153 (17%)
Query: 1086 CETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDL 1145
C + C G C C G+ G CE + G C
Sbjct: 86 CRCRDQSRDRSLCHGKGFLECG----ICRCDTGYIGKNCE--CQTQGRSSQELEGSCRKD 139
Query: 1146 INTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNIN 1205
N+ C C+ CH + I G CEC +
Sbjct: 140 NNSIIC-------SGLGDCVCGQCL---CHTSDVPGKLIYGQYCECD------TINCERY 183
Query: 1206 DCASNPCH-RGECIDGENSFTCACHPGFTGALC 1237
+ RG C G C CHPGF G+ C
Sbjct: 184 NGQVCGGPGRGLCFCG----KCRCHPGFEGSAC 212
Score = 36.1 bits (83), Expect = 0.068
Identities = 28/140 (20%), Positives = 40/140 (28%), Gaps = 33/140 (23%)
Query: 1161 HCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCH------- 1213
C+ S CH G + I C C G+ G +CE +S
Sbjct: 85 ECRCRDQSRDRSLCHGKGFLECGI----CRCDTGYIGKNCECQTQGRSSQELEGSCRKDN 140
Query: 1214 -------RGECIDGENSFTCACHPGFTGALC---------NTQLDECASNPCQFGGQCED 1257
G+C+ G C CH + C G+
Sbjct: 141 NSIICSGLGDCVCG----QCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGL- 195
Query: 1258 LINGYQCRCKPGTSGTNCEI 1277
+CRC PG G+ C+
Sbjct: 196 -CFCGKCRCHPGFEGSACQH 214
Score = 32.7 bits (74), Expect = 0.97
Identities = 22/146 (15%), Positives = 36/146 (24%), Gaps = 22/146 (15%)
Query: 290 CLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGA 349
+ CE + S S+CH + C C G+ G +C +
Sbjct: 75 IVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGI----CRCDTGYIGKNCE--CQTQGRS 128
Query: 350 ACFNGATCIDRVGSFYC-----------QCTPGKTGLLCHLEDACTSNPCHADAICDTNP 398
+ +C S C C C + + +
Sbjct: 129 SQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVC 188
Query: 399 IING-----SYTCSCASGYKGVNCSE 419
G C C G++G C
Sbjct: 189 GGPGRGLCFCGKCRCHPGFEGSACQH 214
Score = 31.1 bits (70), Expect = 2.4
Identities = 25/138 (18%), Positives = 38/138 (27%), Gaps = 13/138 (9%)
Query: 338 DCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAICDTN 397
+C + C + C+C G G C + S+ + N
Sbjct: 85 ECRCRDQSRDRSLCHGKGFLECGI----CRCDTGYIGKNCECQTQGRSSQELEGSCRKDN 140
Query: 398 PIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFK-----PCRHGGTCIDLV 452
I S C G + S+ + G CE + +C G C
Sbjct: 141 NSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC-- 198
Query: 453 NAYKCVCQVPYTGHDCHQ 470
KC C + G C
Sbjct: 199 --GKCRCHPGFEGSACQH 214
Score = 31.1 bits (70), Expect = 2.9
Identities = 25/136 (18%), Positives = 38/136 (27%), Gaps = 35/136 (25%)
Query: 98 CDCAPGFVGQTCSEDIIECVDDPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCE 157
C C G++G+ C + + G C + S C
Sbjct: 109 CRCDTGYIGKNCECQT-QGRSSQELEGSCRKDNNS---------------------IICS 146
Query: 158 HDGTCVN--TPGSFACNCTQGFTGPRCETNVNECESH-----PCQNDGSCLDDPGTFRCV 210
G CV + + G CE + CE + G C
Sbjct: 147 GLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCG------K 200
Query: 211 CMCEPGYTGQNCESKY 226
C C PG+ G C+ +
Sbjct: 201 CRCHPGFEGSACQHHH 216
Score = 29.6 bits (66), Expect = 7.8
Identities = 25/129 (19%), Positives = 39/129 (30%), Gaps = 23/129 (17%)
Query: 910 PNRCQHGARCTPSANFQDFACHCGVGWTGRYCNEDVDE---CQLSSPCRNGATCHNTNGS 966
++ + + C + C C G+ G+ C +L CR +G
Sbjct: 89 RDQSRDRSLCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGL 148
Query: 967 YLCEC-----------AKGYEGRDCLINTDDCASF-----PCQNGGTCLDEVGDYSCLCV 1010
C C K G+ C +T +C + G C C C
Sbjct: 149 GDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCF----CGKCRCH 204
Query: 1011 DGFSGKHCE 1019
GF G C+
Sbjct: 205 PGFEGSACQ 213
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1
PDB: 1haf_A 1hre_A 1hrf_A
Length = 63
Score = 35.5 bits (81), Expect = 0.010
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query: 1356 DECASDPCLNGGTC-----EDGLNQFICHCKPGYGGKRCE 1390
E C+NGG C ++++C C+PG+ G RC
Sbjct: 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT 46
Score = 34.3 bits (78), Expect = 0.025
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 38 NSCDSFPCMNGGTC----TLKSLDRYTCTCAPGFTGSQCE 73
+ C+NGG C L + RY C C PGFTG++C
Sbjct: 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT 46
Score = 34.0 bits (77), Expect = 0.032
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 1280 NECYSNPCRNGAKC-----VDGINRYSCECLPGYTGLHCETNI 1317
E C NG +C + +RY C+C PG+TG C N+
Sbjct: 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENV 49
Score = 33.2 bits (75), Expect = 0.060
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Query: 1091 NECESHPCQNDGSC-----LDDPGTFRCVCMPGFTGTQCET 1126
E E C N G C L +P + C C PGFTG +C
Sbjct: 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTE 47
Score = 32.0 bits (72), Expect = 0.20
Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
Query: 1129 DECASNPCLNGGIC-----NDLINTFKCACPIGFTGSHCQ 1163
E C+NGG C + + C C GFTG+ C
Sbjct: 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT 46
Score = 31.3 bits (70), Expect = 0.29
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 154 SPCEHDGTC-----VNTPGSFACNCTQGFTGPRCETNV 186
+ C + G C ++ P + C C GFTG RC NV
Sbjct: 12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENV 49
Score = 31.3 bits (70), Expect = 0.29
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 1058 SPCEHDGTC-----VNTPGSFACNCTQGFTGPRCETNV 1090
+ C + G C ++ P + C C GFTG RC NV
Sbjct: 12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENV 49
Score = 30.5 bits (68), Expect = 0.63
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 228 PCDPSPCQNGGVCRELDNLN----YECECQSGYRGKNCEENI 265
+ + C NGG C + +L+ Y C+CQ G+ G C EN+
Sbjct: 8 EKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENV 49
Score = 30.1 bits (67), Expect = 0.90
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Query: 187 NECESHPCQNDGSCL---DDPGTFRCVCMCEPGYTGQNCESKYVP 228
E E C N G C D R +C C+PG+TG C
Sbjct: 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPM 51
Score = 29.7 bits (66), Expect = 1.1
Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Query: 631 DCDSNPCQNGGFCRSKEG----GGYRCDCPPGATGTHCE 665
+ + C NGG C + Y C C PG TG C
Sbjct: 8 EKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT 46
Score = 29.7 bits (66), Expect = 1.2
Identities = 13/40 (32%), Positives = 15/40 (37%), Gaps = 5/40 (12%)
Query: 985 DDCASFPCQNGGTC-----LDEVGDYSCLCVDGFSGKHCE 1019
+ C NGG C L Y C C GF+G C
Sbjct: 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT 46
Score = 29.3 bits (65), Expect = 1.8
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Query: 1394 DECGSNPCQHGGIC-----TDHLNGYTCECQIGYTGINCE 1428
E C +GG C + + Y C+CQ G+TG C
Sbjct: 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT 46
Score = 29.3 bits (65), Expect = 1.8
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCE 33
C NGG C + + S + C C GF+ + C
Sbjct: 14 CVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT 46
Score = 28.9 bits (64), Expect = 2.0
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Query: 1167 DDCVSSPCHNGGIC-----KDSIAGYTCECLAGFTGMSCETNI 1204
+ + C NGG C + + Y C+C GFTG C N+
Sbjct: 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENV 49
Score = 28.9 bits (64), Expect = 2.0
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 5/39 (12%)
Query: 1318 NECASNPCANGGVC-----VDLIDGFKCECPRGYYDARC 1351
E C NGG C + + C+C G+ ARC
Sbjct: 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARC 45
Score = 27.4 bits (60), Expect = 6.8
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Query: 435 DDCAFKPCRHGGTC-----IDLVNAYKCVCQVPYTGHDCHQKL 472
+ C +GG C + + Y C CQ +TG C + +
Sbjct: 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENV 49
Score = 27.4 bits (60), Expect = 6.8
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Query: 868 DDCAFKPCRHGGTC-----IDLVNAYKCVCQVPYTGHDCHQKL 905
+ C +GG C + + Y C CQ +TG C + +
Sbjct: 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENV 49
Score = 27.0 bits (59), Expect = 9.4
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 5/43 (11%)
Query: 266 DDCPGNLCQNGATCM-----DGINKYSCLCLATYTGDLCEQDV 303
+ C NG C ++Y C C +TG C ++V
Sbjct: 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENV 49
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN
0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Length = 503
Score = 38.4 bits (88), Expect = 0.028
Identities = 16/65 (24%), Positives = 22/65 (33%), Gaps = 12/65 (18%)
Query: 1332 VDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEF 1391
+ + C+C C SD A G + G +C C PG G+ CE
Sbjct: 447 LIVELHTLCDCN-------C-SDTQPQAPHCSDGQGHLQCG----VCSCAPGRLGRLCES 494
Query: 1392 DIDEC 1396
E
Sbjct: 495 RGLEN 499
Score = 33.7 bits (76), Expect = 0.61
Identities = 15/62 (24%), Positives = 19/62 (30%), Gaps = 12/62 (19%)
Query: 245 NLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVD 304
L+ C+C NC + P G G+ C C G LCE
Sbjct: 450 ELHTLCDC-------NCSDTQPQAPHCSDGQG-HLQCGV----CSCAPGRLGRLCESRGL 497
Query: 305 EC 306
E
Sbjct: 498 EN 499
Score = 33.7 bits (76), Expect = 0.70
Identities = 19/120 (15%), Positives = 28/120 (23%), Gaps = 24/120 (20%)
Query: 1212 CHRGECIDGENSFTCAC-----------HPGFTGALCNTQLDECASNPCQFGGQCEDLIN 1260
C E +G+ C C + F + +
Sbjct: 393 CEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHCLPEPHLLRLRALGFSEELI-VEL 451
Query: 1261 GYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINEC 1320
C C NC + + G+ C C PG G CE+ E
Sbjct: 452 HTLCDC-------NCSDTQPQA-PHCSDGQGHLQCGV----CSCAPGRLGRLCESRGLEN 499
Score = 32.6 bits (73), Expect = 1.4
Identities = 11/44 (25%), Positives = 15/44 (34%), Gaps = 3/44 (6%)
Query: 947 ECQLSSPCRNGATCHNTNGSY---LCECAKGYEGRDCLINTDDC 987
+C S C + G +C CA G GR C +
Sbjct: 456 DCNCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCESRGLEN 499
Score = 32.2 bits (72), Expect = 1.8
Identities = 12/43 (27%), Positives = 13/43 (30%), Gaps = 4/43 (9%)
Query: 1092 ECESHPCQNDGSCLDDPGTF---RCVCMPGFTGTQCETDIDEC 1131
C C D G C C PG G CE+ E
Sbjct: 458 NCS-DTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCESRGLEN 499
Score = 31.4 bits (70), Expect = 3.3
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 7/42 (16%)
Query: 517 CEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCE 558
C + + G L C C+C PG +GR CE
Sbjct: 459 CSDTQPQA-PHCSDGQGHLQCGV------CSCAPGRLGRLCE 493
Score = 30.3 bits (67), Expect = 8.0
Identities = 10/42 (23%), Positives = 12/42 (28%)
Query: 907 PCVPNRCQHGARCTPSANFQDFACHCGVGWTGRYCNEDVDEC 948
C + Q + Q C C G GR C E
Sbjct: 458 NCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCESRGLEN 499
Score = 30.3 bits (67), Expect = 8.2
Identities = 9/41 (21%), Positives = 12/41 (29%), Gaps = 3/41 (7%)
Query: 155 PCEHDGTCVNTPGSF---ACNCTQGFTGPRCETNVNECESH 192
C + G C+C G G CE+ E
Sbjct: 462 TQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCESRGLENLYF 502
Score = 30.3 bits (67), Expect = 8.2
Identities = 9/41 (21%), Positives = 12/41 (29%), Gaps = 3/41 (7%)
Query: 1059 PCEHDGTCVNTPGSF---ACNCTQGFTGPRCETNVNECESH 1096
C + G C+C G G CE+ E
Sbjct: 462 TQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCESRGLENLYF 502
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus
musculus}
Length = 375
Score = 37.8 bits (87), Expect = 0.028
Identities = 25/140 (17%), Positives = 32/140 (22%), Gaps = 16/140 (11%)
Query: 519 GDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEV-KDLAVKVTSMNASPTLAP 577
D C+ H + + CNC+ G CE A+ A
Sbjct: 247 SDFAVGGRCKCNGHASECVKNEFDKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESAS 306
Query: 578 LTVLWIAYNWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPC 637
+ S L G GGH C DN G CE C
Sbjct: 307 ECLPCDCNGRSQECYFDPELYRSTGH------GGHCTNCRDNTDGAKCER---------C 351
Query: 638 QNGGFCRSKEGGGYRCDCPP 657
+ F
Sbjct: 352 RENFFRLGNTEACSPAAAHH 371
Score = 35.5 bits (81), Expect = 0.17
Identities = 34/236 (14%), Positives = 55/236 (23%), Gaps = 21/236 (8%)
Query: 985 DDCAS-FPCQNGGTCLDEVGDYSCLCVDGFSGKHCEVDIDECSSNPCHNGATCNQFQMIF 1043
C + + N G + LC D FS DI + +
Sbjct: 149 GSCENTYSKANRGFIRTGGDEQQALCTDEFS------DISPLTGGNVAFSTLEGRPSAYN 202
Query: 1044 IFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGS 1103
+ ++ A + ++ C S
Sbjct: 203 FDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNEPKVLKSYYYAISDFAVGGRCKCNGHAS 262
Query: 1104 C--LDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCACPIGFTGSH 1161
++ C C G CE + P C C +
Sbjct: 263 ECVKNEFDKLMCNCKHNTYGVDCEKCLPFFNDRP-WRRATAESASECLPCDCNGRSQECY 321
Query: 1162 CQINIDDCVSSPCHNGGI---CKDSIAGYTCE-CLAGFTGMSCETNINDCASNPCH 1213
D + +GG C+D+ G CE C F + N C+ H
Sbjct: 322 F----DPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLG---NTEACSPAAAH 370
Score = 35.5 bits (81), Expect = 0.18
Identities = 22/183 (12%), Positives = 40/183 (21%), Gaps = 14/183 (7%)
Query: 119 DPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFT 178
P G + + ++ A +
Sbjct: 182 SPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNEPKVLKS 241
Query: 179 GPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDPSPCQNGG 238
++ C S + +C C+ G +CE C P
Sbjct: 242 YYYAISDFAVGGRCKCNGHASECVKNEFDKLMCNCKHNTYGVDCEK----CLPFFNDRPW 297
Query: 239 VCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDL 298
++ + C R + C D +G C + C G
Sbjct: 298 RRATAESASECLPCDCNGRSQEC--YFDPELYRSTGHGGHCTN--------CRDNTDGAK 347
Query: 299 CEQ 301
CE+
Sbjct: 348 CER 350
Score = 32.0 bits (72), Expect = 2.2
Identities = 21/97 (21%), Positives = 34/97 (35%), Gaps = 9/97 (9%)
Query: 1255 CEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCE 1314
++ + C CK T G +CE + P R A C+C + +
Sbjct: 265 VKNEFDKLMCNCKHNTYGVDCEKCLPFFNDRPWR-RATAESASECLPCDCNGRSQECYFD 323
Query: 1315 TNINECASNPCANGGVCVD---LIDGFKCE-CPRGYY 1347
+ +GG C + DG KCE C ++
Sbjct: 324 PELYRS----TGHGGHCTNCRDNTDGAKCERCRENFF 356
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus
musculus} PDB: 3a7q_A*
Length = 725
Score = 38.1 bits (87), Expect = 0.035
Identities = 26/210 (12%), Positives = 48/210 (22%), Gaps = 29/210 (13%)
Query: 260 NCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATC 319
N + + C +C +YS ++ + + + +
Sbjct: 429 NEDSFLQIDFAASCSVTDSCYAIELEYSVDLGLSWHPLVRDC---------LPTNVECSR 479
Query: 320 TNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHL 379
+ N WT I + + AT ++
Sbjct: 480 YHLQRILVSDTFNKWT------RITLPLPSYTRSQATRFRWHQPAPFDKQQTWAIDNVYI 533
Query: 380 EDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAF 439
D C + C C +C C + G+ C E + N
Sbjct: 534 GDGC-LDMCSGHGRCVQG-------SCVCDEQWGGLYCDEPETSLPTQLKDNFNRAPSNQ 585
Query: 440 KPCRHGGTCIDLVNAYKCVCQVPYTGHDCH 469
G + VC +G H
Sbjct: 586 NWLTVSGGKLS------TVCGAVASGLALH 609
Score = 36.9 bits (84), Expect = 0.075
Identities = 31/231 (13%), Positives = 55/231 (23%), Gaps = 20/231 (8%)
Query: 1283 YSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCEC 1342
++ C C YS + + L + P L +
Sbjct: 438 FAASCSVTDSCYAIELEYSVDLGLSWHPLVRDCL-------PTNVECSRYHLQRILVSDT 490
Query: 1343 PRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQ 1402
+ + + + T + + I + + C
Sbjct: 491 FNKW------TRITLPLPSYTRSQATRFRWHQPAPFDKQQTWAI--DNVYIGDGCLDMCS 542
Query: 1403 HGGICTDHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCAKAGNH 1462
G C +C C + G+ C+ + + N K
Sbjct: 543 GHGRCVQG----SCVCDEQWGGLYCDEPETSLPTQLKDNFNRAPSNQNWLTVSGGKLSTV 598
Query: 1463 RCDDECNTIACHFDGNDCSLGINPWINCTANINCWEVFMNGRCDEVCNNPQ 1513
C + +A HF G L + +N T FM G N Q
Sbjct: 599 -CGAVASGLALHFSGGCSRLLVTVDLNLTNAEFIQFYFMYGCLITPSNRNQ 648
Score = 35.8 bits (81), Expect = 0.20
Identities = 13/73 (17%), Positives = 19/73 (26%), Gaps = 6/73 (8%)
Query: 1060 CEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGF 1119
C G CV +C C + + G C+ + N + G
Sbjct: 541 CSGHGRCVQG----SCVCDEQWGGLYCDEPETSLPTQLKDNFNRAPSNQNW--LTVSGGK 594
Query: 1120 TGTQCETDIDECA 1132
T C A
Sbjct: 595 LSTVCGAVASGLA 607
Score = 35.0 bits (79), Expect = 0.26
Identities = 17/115 (14%), Positives = 26/115 (22%), Gaps = 9/115 (7%)
Query: 209 CVCMCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDC 268
+ + N C C G C C C + G C+E
Sbjct: 518 APFDKQQTWAIDNVYIG-DGCLDM-CSGHGRCV-----QGSCVCDEQWGGLYCDEPETSL 570
Query: 269 PGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSV 323
P L N N +C ++ S + T +
Sbjct: 571 PTQLKDNFNRAPSNQNW--LTVSGGKLSTVCGAVASGLALHFSGGCSRLLVTVDL 623
Score = 34.6 bits (78), Expect = 0.35
Identities = 23/166 (13%), Positives = 37/166 (22%), Gaps = 22/166 (13%)
Query: 227 VPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKY 286
+ D P L + + + + I + ++ AT
Sbjct: 466 LVRDCLPTNVECSRYHLQRI-LVSDTFNKWT------RITLPLPSYTRSQATRFRWHQPA 518
Query: 287 SCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDC 346
T+ D +V +C C SC+C W G C
Sbjct: 519 PFDKQQTWAID----NVYIGDGCLDMCSGHGRCVQG----SCVCDEQWGGLYCDEPETSL 570
Query: 347 AGAACFNGATCIDRVG-------SFYCQCTPGKTGLLCHLEDACTS 385
N C +GL H C+
Sbjct: 571 PTQLKDNFNRAPSNQNWLTVSGGKLSTVCGAVASGLALHFSGGCSR 616
Score = 34.6 bits (78), Expect = 0.37
Identities = 26/238 (10%), Positives = 54/238 (22%), Gaps = 24/238 (10%)
Query: 1030 CHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETN 1089
C +F + +++ ++ + + + +C+ T E +
Sbjct: 397 GTKMPVCGSTGDALVFIEKASTRYVVTTDIAVNEDSFLQIDFAASCSVTDSCYAIELEYS 456
Query: 1090 VNE--------CESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGI 1141
V+ + P + S +T + +
Sbjct: 457 VDLGLSWHPLVRDCLPTNVECSRYHLQRILVSDTFNKWTRITL------PLPSYTRSQAT 510
Query: 1142 CNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCE 1201
+ + I D C G C +C C + G+ C+
Sbjct: 511 RFRWHQPAPFDKQQTWAIDNVYIG--DGCLDMCSGHGRCVQG----SCVCDEQWGGLYCD 564
Query: 1202 TNINDCASNPCHRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLI 1259
+ N G +C A F G C L+
Sbjct: 565 EPETSLPTQLKDNFNR-APSNQNWLTVSGGKLSTVCGAVASGLA---LHFSGGCSRLL 618
Score = 34.2 bits (77), Expect = 0.45
Identities = 13/89 (14%), Positives = 22/89 (24%), Gaps = 5/89 (5%)
Query: 156 CEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEP 215
C G CV +C C + + G C+ + N +
Sbjct: 541 CSGHGRCVQG----SCVCDEQWGGLYCDEPETSLPTQLKDNFNRAPSNQNWLTVSGGKLS 596
Query: 216 GYTGQNCESKYVPCDPSPCQNGGVCRELD 244
G + C V +L+
Sbjct: 597 TVCGAVASGLALHFSGG-CSRLLVTVDLN 624
Score = 32.3 bits (72), Expect = 2.1
Identities = 16/153 (10%), Positives = 32/153 (20%), Gaps = 13/153 (8%)
Query: 1169 CVSSPCHNGGICKDSIAGYTCECLAGFTGMSCETNINDCASNPCHRGECIDGENSFTCAC 1228
P + + +T ++ + R
Sbjct: 468 RDCLPTNVECSRYHLQRILVSDTFNKWTRITLPLPSYTRSQATRFRWHQPA-----PFDK 522
Query: 1229 HPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNPCR 1288
+ N + + + C G+C C C G C+ +
Sbjct: 523 QQTWAI--DNVYIGDGCLDMCSGHGRCV----QGSCVCDEQWGGLYCDEPETSLPTQLKD 576
Query: 1289 NGAKCVDGINRYSCECLPGYTGLHCETNINECA 1321
N + N + G C + A
Sbjct: 577 NFNRAPSNQNWLTVSG--GKLSTVCGAVASGLA 607
Score = 31.2 bits (69), Expect = 4.7
Identities = 27/174 (15%), Positives = 45/174 (25%), Gaps = 13/174 (7%)
Query: 200 CLDDPGTFRCVCMCEPGYTGQNCESKYVP-CDPSPCQNGGVCRELD-NLNYECECQSGYR 257
P C + +K+ P P + + Q +
Sbjct: 468 RDCLPTNVECSRYHLQRILVSDTFNKWTRITLPLPSYTRSQATRFRWHQPAPFDKQQTWA 527
Query: 258 GKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGA 317
N D C ++C C+ G SC+C + G C++ + N A
Sbjct: 528 IDNVYIG-DGCL-DMCSGHGRCVQG----SCVCDEQWGGLYCDEPETSLPTQLKDNFNRA 581
Query: 318 T-----CTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYC 366
T S G S +C +G + + FY
Sbjct: 582 PSNQNWLTVSGGKLSTVCGAVASGLALHFSGGCSRLLVTVDLNLTNAEFIQFYF 635
Score = 30.0 bits (66), Expect = 9.1
Identities = 15/95 (15%), Positives = 23/95 (24%), Gaps = 10/95 (10%)
Query: 875 CRHGGTCIDLVNAYKCVCQVPYTGHDCHQKLDPCVPNRCQHGARCTPSANFQDFACHCGV 934
C G C+ CVC + G C + + R + N+
Sbjct: 541 CSGHGRCVQ----GSCVCDEQWGGLYCDEPETSLPTQLKDNFNRAPSNQNW----LTVSG 592
Query: 935 GWTGRYCNEDVDEC--QLSSPCRNGATCHNTNGSY 967
G C S C + N +
Sbjct: 593 GKLSTVCGAVASGLALHFSGGCSRLLVTVDLNLTN 627
>1nzi_A Complement C1S component; calcium, innate immunity, modular
structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens}
SCOP: b.23.1.1 g.3.11.1
Length = 159
Score = 35.9 bits (83), Expect = 0.041
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Query: 933 GVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGSYLCECAKGYE----GRDCLIN 983
G+ Y D++EC C+N G Y C C Y ++C +N
Sbjct: 105 FTGFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVN 159
Score = 32.1 bits (73), Expect = 0.84
Identities = 11/56 (19%), Positives = 18/56 (32%), Gaps = 7/56 (12%)
Query: 508 FGMKHIGSRCEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYM----GRHCEV 559
G + + + SH C + Y C+C P Y ++C V
Sbjct: 106 TGFAAYYVATDINECTDFVDVPCSH---FCNNFIGGYFCSCPPEYFLHDDMKNCGV 158
Score = 30.2 bits (68), Expect = 3.8
Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 5/53 (9%)
Query: 1383 GYGGKRCEFDIDECGSNPC-QHGGICTDHLNGYTCECQIGYT----GINCEIN 1430
G+ DI+EC C + + GY C C Y NC +N
Sbjct: 107 GFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVN 159
Score = 29.0 bits (65), Expect = 9.1
Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 5/53 (9%)
Query: 1231 GFTGALCNTQLDECASNPC-QFGGQCEDLINGYQCRCKPG----TSGTNCEIN 1278
GF T ++EC C + I GY C C P NC +N
Sbjct: 107 GFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVN 159
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting,
fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo
sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B*
2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B*
2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B*
1tye_B*
Length = 472
Score = 37.6 bits (86), Expect = 0.047
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 188 ECESHPCQNDGSCLDDPGTFRC-VCMCEPGYTGQNCE 223
C++ N C + GTF C VC C PG+ G CE
Sbjct: 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCE 472
Score = 35.3 bits (80), Expect = 0.20
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 11/59 (18%)
Query: 1332 VDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCE 1390
+ + F C+C C + + + GT E G +C C PG+ G +CE
Sbjct: 425 LIVQVTFDCDCA-------CQAQAEPNSHRCNNGNGTFECG----VCRCGPGWLGSQCE 472
Score = 33.7 bits (76), Expect = 0.64
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 6/42 (14%)
Query: 517 CEGDINECLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCE 558
C+ + +GT +C C C PG++G CE
Sbjct: 437 CQAQAEPNSHRCNNGNGTFECGV------CRCGPGWLGSQCE 472
Score = 32.2 bits (72), Expect = 1.8
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 1092 ECESHPCQNDGSCLDDPGTF---RCVCMPGFTGTQCE 1125
C++ N C + GTF C C PG+ G+QCE
Sbjct: 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCE 472
Score = 30.7 bits (68), Expect = 5.0
Identities = 10/56 (17%), Positives = 18/56 (32%), Gaps = 11/56 (19%)
Query: 245 NLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCE 300
+ ++C+C C+ + T G+ C C + G CE
Sbjct: 428 QVTFDCDCA-------CQAQAEPNSHRCNNGNGTFECGV----CRCGPGWLGSQCE 472
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2
g.3.11.2 PDB: 1npe_B 1tle_A
Length = 162
Score = 35.6 bits (82), Expect = 0.054
Identities = 32/141 (22%), Positives = 50/141 (35%), Gaps = 22/141 (15%)
Query: 1260 NGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINE 1319
C GT+G CE+ + + +P + C P C NI+
Sbjct: 17 EVVCTHCPTGTAGKRCELCDDGYFGDPLGSNG--------PVRLCRP----CQCNDNIDP 64
Query: 1320 CASNPC-ANGGVCVDLID---GFKCE-CPRGYY-DARCLSDVDECASDPCLNGGTCEDGL 1373
A C G C+ I GF C+ C G++ + + D+C + C GT +
Sbjct: 65 NAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQS 124
Query: 1374 NQFI----CHCKPGYGGKRCE 1390
+ C C P G+ C
Sbjct: 125 SCNPVTGQCQCLPHVSGRDCG 145
Score = 30.2 bits (68), Expect = 4.0
Identities = 33/158 (20%), Positives = 46/158 (29%), Gaps = 24/158 (15%)
Query: 193 PCQNDGSCLDDPGTFRCVC-MCEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECE 251
PC SC P T VC C G G+ CE CD + L C
Sbjct: 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCEL----CDDGYFGDPLGSNGPVRLCRPC- 56
Query: 252 CQSGYRGKNCEENIDDCPGNLCQNG----ATCMDGINKYSC-LCLATYTGDLCEQDVDEC 306
C +NID C C+ + C C + G+ + +
Sbjct: 57 --------QCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADK 108
Query: 307 SIRPSVCHNGATCTNSVGGFS----CICVNGWTGPDCS 340
+ C+ T C C+ +G DC
Sbjct: 109 C-KACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCG 145
>3ca7_A Protein spitz; argos, EGF, developmental protein,
differentiation, EGF-like domain, endoplasmic
reticulum, glycoprotein, golgi apparatus; 1.50A
{Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Length = 52
Score = 32.6 bits (74), Expect = 0.071
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 45 CMNGGTC---TLKSLDRYTCTCAPGFTGSQCELQD 76
C+N C + L Y+C CA GF G +CE ++
Sbjct: 16 CLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKE 50
Score = 32.2 bits (73), Expect = 0.099
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 1363 CLNGGTC----EDGLNQFICHCKPGYGGKRCEF 1391
CLN C L + C C G+ G+RCE+
Sbjct: 16 CLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48
Score = 31.0 bits (70), Expect = 0.32
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Query: 156 CEHDGTCVNTPGS----FACNCTQGFTGPRCET 184
C +D C + ++C C GF G RCE
Sbjct: 16 CLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48
Score = 31.0 bits (70), Expect = 0.32
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Query: 1060 CEHDGTCVNTPGS----FACNCTQGFTGPRCET 1088
C +D C + ++C C GF G RCE
Sbjct: 16 CLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48
Score = 29.5 bits (66), Expect = 0.96
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Query: 234 CQNGGVC---RELDNLNYECECQSGYRGKNCE 262
C N C + D Y CEC G+ G+ CE
Sbjct: 16 CLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47
Score = 29.1 bits (65), Expect = 1.4
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
Query: 992 CQNGGTC----LDEVGDYSCLCVDGFSGKHCE 1019
C N C + ++ YSC C GF G+ CE
Sbjct: 16 CLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47
Score = 28.0 bits (62), Expect = 3.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 83 CRNGAVCTSLEDT----YECDCAPGFVGQTC 109
C N A C +++ Y C+CA GF+GQ C
Sbjct: 16 CLNDAHCFAVKIADLPVYSCECAIGFMGQRC 46
Score = 27.6 bits (61), Expect = 4.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 544 YHCNCRPGYMGRHCEVKDL 562
Y C C G+MG+ CE K++
Sbjct: 33 YSCECAIGFMGQRCEYKEI 51
Score = 27.2 bits (60), Expect = 6.1
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 1287 CRNGAKC----VDGINRYSCECLPGYTGLHCET 1315
C N A C + + YSCEC G+ G CE
Sbjct: 16 CLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48
Score = 27.2 bits (60), Expect = 6.9
Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 194 CQNDGSC--LDDPGTFRCVCMCEPGYTGQNCESKYV 227
C ND C + C C G+ GQ CE K +
Sbjct: 16 CLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKEI 51
Score = 26.8 bits (59), Expect = 9.0
Identities = 11/32 (34%), Positives = 14/32 (43%), Gaps = 4/32 (12%)
Query: 1136 CLNGGICNDLINT----FKCACPIGFTGSHCQ 1163
CLN C + + C C IGF G C+
Sbjct: 16 CLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement
membrane; HET: NAG; 2.90A {Mus musculus}
Length = 403
Score = 36.4 bits (83), Expect = 0.098
Identities = 23/140 (16%), Positives = 37/140 (26%), Gaps = 8/140 (5%)
Query: 1142 CNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGY-----TCECLAGFT 1196
L+ + + +I CH D+ C C
Sbjct: 236 LGHLMGKALRDPTVTRRYYYSIKDISIGGRCVCHGHADVCDAKDPLDPFRLQCACQHNTC 295
Query: 1197 GMSCETNINDCASNPCHRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCE 1256
G SC+ P +C CH + ++D ++ Q
Sbjct: 296 GGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREASQNQDNV--- 352
Query: 1257 DLINGYQCRCKPGTSGTNCE 1276
G C+ T+G NCE
Sbjct: 353 YQGGGVCLDCQHHTTGINCE 372
Score = 34.5 bits (78), Expect = 0.37
Identities = 19/138 (13%), Positives = 32/138 (23%), Gaps = 13/138 (9%)
Query: 524 CLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEV-KDLAVKVTSMNASPTLAPLTVLW 582
C+ + + C C+ G C+ + A+ A
Sbjct: 266 CVCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSC 325
Query: 583 IAYNWSTTTTATAALATWNGGVCTAL---DGGHTCICPDNYSGRNCEYFGYDCDSNPCQN 639
+ + + GG C + +G NCE C
Sbjct: 326 NCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINCER---------CLP 376
Query: 640 GGFCRSKEGGGYRCDCPP 657
G F + C P
Sbjct: 377 GFFRAPDQPLDSPHVCRP 394
Score = 33.7 bits (76), Expect = 0.55
Identities = 23/127 (18%), Positives = 33/127 (25%), Gaps = 6/127 (4%)
Query: 1304 CLPGYTGLHCETNINECASNPCANGGVCVDLIDGFK--CECPRGYYDARCLSDVDECASD 1361
Y + + C + A+ D +D F+ C C C D C
Sbjct: 250 TRRYYYSIKDISIGGRCVCHGHADVCDAKDPLDPFRLQCACQHNTCGGSC----DRCCPG 305
Query: 1362 PCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIG 1421
+ C +G + E G +CQ
Sbjct: 306 FNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHH 365
Query: 1422 YTGINCE 1428
TGINCE
Sbjct: 366 TTGINCE 372
Score = 33.7 bits (76), Expect = 0.66
Identities = 23/161 (14%), Positives = 42/161 (26%), Gaps = 16/161 (9%)
Query: 147 SWFLIAGSPCEHDGTCVNTPGSFACNCTQ-GFTGPRCETNVNECESHPCQNDGSCLDDPG 205
+ + + T+ + + + C H + D
Sbjct: 223 TNIRLRFLRTNTLLGHLMGKALRDPTVTRRYYYSIKDISIGGRCVCHGHADVCDAKDPLD 282
Query: 206 TFRCVCMCEPGYTGQNCES-----KYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKN 260
FR C C+ G +C+ P P+ + C C C
Sbjct: 283 PFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANEC-------QSCNCHGHAYDCY 335
Query: 261 CEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQ 301
+ +D + Q+ G+ C TG CE+
Sbjct: 336 YDPEVDRREASQNQDNVYQGGGV---CLDCQHHTTGINCER 373
Score = 33.7 bits (76), Expect = 0.66
Identities = 17/110 (15%), Positives = 27/110 (24%), Gaps = 4/110 (3%)
Query: 1093 CESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGICNDLINTFKCA 1152
C H D DP +C C G C+ C + +C
Sbjct: 268 CHGHADVCDAKDPLDPFRLQCACQHNTCGGSCD----RCCPGFNQQPWKPATTDSANECQ 323
Query: 1153 CPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECLAGFTGMSCET 1202
++ + G +C TG++CE
Sbjct: 324 SCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINCER 373
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY
acidic protein fold, fibronectin type III fold, hormone-
growth factor complex; NMR {Homo sapiens}
Length = 680
Score = 36.5 bits (83), Expect = 0.11
Identities = 26/152 (17%), Positives = 40/152 (26%), Gaps = 26/152 (17%)
Query: 171 CNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCD 230
RC + C S + + C+ C PC
Sbjct: 15 SLSAGSVQRARCASR---CLSLQITRISAFFQHFQNNGSLVWCQNHKQCSKCLE---PCK 68
Query: 231 PSPCQNGGVCREL-----DNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINK 285
S C+ +YEC + DCP + +
Sbjct: 69 ESGDLRKHQCQSFCEPLFPKKSYECLTSCEFLKYILLVKQGDCP---------APEKASG 119
Query: 286 YSCLCLATYTGDLCEQDVDECSIRPSVCHNGA 317
++ C+ + CE D +ECS C NG
Sbjct: 120 FAAACVES-----CEVD-NECSGVKKCCSNGC 145
Score = 35.3 bits (80), Expect = 0.23
Identities = 22/121 (18%), Positives = 34/121 (28%), Gaps = 13/121 (10%)
Query: 1349 ARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICT 1408
+RCLS S + N + C+ +C PC+ G
Sbjct: 28 SRCLSLQITRISAFFQHFQN-----NGSLVWCQNHKQCSKC--------LEPCKESGDLR 74
Query: 1409 DHLNGYTCECQIGYTGINCEINIDDCAFKPCRHGGTCIDLVNAYKCVCAKAGNHRCDDEC 1468
H CE C + + + G C A A + D+EC
Sbjct: 75 KHQCQSFCEPLFPKKSYECLTSCEFLKYILLVKQGDCPAPEKASGFAAACVESCEVDNEC 134
Query: 1469 N 1469
+
Sbjct: 135 S 135
Score = 34.6 bits (78), Expect = 0.43
Identities = 22/111 (19%), Positives = 31/111 (27%), Gaps = 12/111 (10%)
Query: 240 CRELDNLNYECECQSGYRGKNCEE---NIDDCPGNLCQNGATCMDGINKYSCLCLATYTG 296
+ N CQ+ + C E D + CQ+ + Y CL +
Sbjct: 42 FQHFQNNGSLVWCQNHKQCSKCLEPCKESGDLRKHQCQSFCEPLFPKKSYECLTSCEFLK 101
Query: 297 DLCEQDVDECSIRPSVCHNGATCTNS-------VGGFSCICVNGWTGPDCS 340
+ +C A C S G C C NG G C
Sbjct: 102 YILLVKQGDCPAPEKASGFAAACVESCEVDNECSGVKKC-CSNGC-GHTCQ 150
Score = 33.8 bits (76), Expect = 0.79
Identities = 14/89 (15%), Positives = 23/89 (25%), Gaps = 3/89 (3%)
Query: 166 PGSFACNCTQGFTGPRCETNV---NECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNC 222
C +C + H CQ+ L ++ C+ CE
Sbjct: 47 NNGSLVWCQNHKQCSKCLEPCKESGDLRKHQCQSFCEPLFPKKSYECLTSCEFLKYILLV 106
Query: 223 ESKYVPCDPSPCQNGGVCRELDNLNYECE 251
+ P C E ++ EC
Sbjct: 107 KQGDCPAPEKASGFAAACVESCEVDNECS 135
Score = 33.0 bits (74), Expect = 1.0
Identities = 27/172 (15%), Positives = 42/172 (24%), Gaps = 20/172 (11%)
Query: 1214 RGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQCRCKPGTSGT 1273
E + + C + C + S Q NG C+ +
Sbjct: 12 LDESLSAGSVQRARCA-----SRCLSLQITRISAFFQHFQN-----NGSLVWCQNHKQCS 61
Query: 1274 NCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVC-- 1331
C PC+ + CE L C T+ G C
Sbjct: 62 KC--------LEPCKESGDLRKHQCQSFCEPLFPKKSYECLTSCEFLKYILLVKQGDCPA 113
Query: 1332 VDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPG 1383
+ GF C S V +C S+ C + L + +
Sbjct: 114 PEKASGFAAACVESCEVDNECSGVKKCCSNGCGHTCQVPKTLYKGVPLKPRK 165
Score = 32.6 bits (73), Expect = 1.4
Identities = 23/144 (15%), Positives = 42/144 (29%), Gaps = 8/144 (5%)
Query: 895 PYTGHDCHQKLDPCVPNRCQHGARCTP------SANFQDFACHCGVGWTGRYCNEDVDEC 948
G ++LD + ARC F H + +C
Sbjct: 2 AGPGAAAARRLDESLSAGSVQRARCASRCLSLQITRISAFFQHFQNNGSLVWCQNHKQCS 61
Query: 949 QLSSPCRNGATCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTC--LDEVGDYS 1006
+ PC+ CE + +CL + + G C ++ ++
Sbjct: 62 KCLEPCKESGDLRKHQCQSFCEPLFPKKSYECLTSCEFLKYILLVKQGDCPAPEKASGFA 121
Query: 1007 CLCVDGFSGKHCEVDIDECSSNPC 1030
CV+ + + +C SN C
Sbjct: 122 AACVESCEVDNECSGVKKCCSNGC 145
>1yy9_A Epidermal growth factor receptor; cell surface receptor, tyrosine
kinase, glycoprotein, antigen:antibody complex, FAB
fragment, antitumor, drug; HET: NDG NAG BMA MAN; 2.60A
{Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1
PDB: 3qwq_A* 1nql_A* 3b2v_A* 1ivo_A* 3njp_A*
Length = 624
Score = 35.8 bits (81), Expect = 0.17
Identities = 33/334 (9%), Positives = 69/334 (20%), Gaps = 11/334 (3%)
Query: 155 PCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCE 214
+ TC +T + + + CV C
Sbjct: 229 KFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACG 288
Query: 215 PGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQ 274
+ C VC + ++ +N G+L
Sbjct: 289 ADSYEMEEDGVRK-CKKCEGPCRKVCNGIGIGEFKDSLSINATNIKHFKNCTSISGDLHI 347
Query: 275 NGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGW 334
++ L + T ++ I
Sbjct: 348 LPVAFRGDSFTHTPPLDPQELDILKTVKEITGFLLIQAWPENRTDLHAFENLEIIRGRTK 407
Query: 335 TGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCHADAIC 394
SL + + + G + C +N + +
Sbjct: 408 QHGQFSLAVVSLNITSLGLRSLKEISDGDVIISGNK----------NLCYANTINWKKLF 457
Query: 395 DTNPIINGSYTCSCASGYKGVNCSEDINECEQGINCEINIDDCAFKPCRHGGTCIDLVNA 454
T+ + + K +G D + + G C+D
Sbjct: 458 GTSGQKTKIISNRGENKCKATGQVCHALCSPEGCWGPEPRDCVSCRNVSRGRECVDKCKL 517
Query: 455 YKCVCQVPYTGHDCHQKLDPCVPNSACVRCLTPG 488
+ + +C Q C+P + + C G
Sbjct: 518 LEGEPREFVENSECIQCHPECLPQAMNITCTGRG 551
>2hr7_A Insulin receptor; hormone receptor, leucine rich repeat,
transferase; HET: NAG BMA MAN FUC P33; 2.32A {Homo
sapiens}
Length = 486
Score = 35.6 bits (81), Expect = 0.18
Identities = 35/256 (13%), Positives = 54/256 (21%), Gaps = 19/256 (7%)
Query: 130 HGSYTFQMIFIFFTNQYSWFLIAGSPCEH---DGTCVNTPGSFACNCTQGFTGPRCETNV 186
+ + + W I S ++ N C T T +
Sbjct: 115 GSVRIEKNNELCYLATIDWSRILDSVEDNHIVLNKDDNEECGDICPGTAKGKTNCPATVI 174
Query: 187 NECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNCESKYVPCDP--SPCQNGGVCRELD 244
N C C C +C+ + C S + C
Sbjct: 175 NGQFVERCWTHSHC-----QKVCPTICKSHGCTAEGLCCHSECLGNCSQPDDPTKCVACR 229
Query: 245 NLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVD 304
N + C C C N + C D +K + +
Sbjct: 230 NFYLDGRCVE-----TCPPPYYHFQDWRCVNFSFCQDLHHKCKNSRRQGCHQYVIHNNKC 284
Query: 305 ECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSF 364
N + + C V + ID A G T I+ GS
Sbjct: 285 IPECPSGYTMNSSNLLCTPCLGPCPKVCHLLEGEK--TIDSVTSAQELRGCTVIN--GSL 340
Query: 365 YCQCTPGKTGLLCHLE 380
G
Sbjct: 341 IINIRGGNNLAAELEA 356
Score = 31.4 bits (70), Expect = 3.2
Identities = 25/238 (10%), Positives = 48/238 (20%), Gaps = 17/238 (7%)
Query: 1040 QMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQ 1099
+ + + W I S ++ + G + +
Sbjct: 121 KNNELCYLATIDWSRILDSVEDNHIVLNKDDNEECGDICPGTAKGKTNCPATVINGQFVE 180
Query: 1100 NDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNGGI-----CNDLINTFKC--A 1152
+ +C + EC N C + +C
Sbjct: 181 RCWTHSHCQKVCPTICKSHGCTAEGLCCHSECLGNCSQPDDPTKCVACRNFYLDGRCVET 240
Query: 1153 CPIGF--TGSHCQINIDDCVSSPCHNGGICKDSIAGY-------TCECLAGFTGMSCETN 1203
CP + +N C + Y EC +G+T S
Sbjct: 241 CPPPYYHFQDWRCVNFSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGYTMNSS-NL 299
Query: 1204 INDCASNPCHRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLING 1261
+ PC + + + C N +L
Sbjct: 300 LCTPCLGPCPKVCHLLEGEKTIDSVTSAQELRGCTVINGSLIINIRGGNNLAAELEAN 357
>1haq_A Complement factor H; immunology, glycoprotein, complement alternate
pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A
3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A
Length = 1213
Score = 35.9 bits (82), Expect = 0.19
Identities = 40/289 (13%), Positives = 65/289 (22%), Gaps = 22/289 (7%)
Query: 959 TCHNTNGSYLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEVGDYSCLCVDGFSGKHC 1018
+C + Y T D ++ C+NG C C
Sbjct: 243 SCEEKSCDNPYIPNGDYSPLRIKHRTGDEITYQCRNGFYPATRGNTAKCTSTGWIPAPRC 302
Query: 1019 EVDIDECSSNPCHNGATCNQFQMIFIFFTNQY------SWFLIAGSPCEHDGTCVNTPGS 1072
+ + N + F +Y F C S
Sbjct: 303 TLKPCDYPDIKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDGWS 362
Query: 1073 FACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETDIDECA 1132
A C + P E N+ S C PG+ + +T + C
Sbjct: 363 PAVPCLRKCYFPYLENGYNQNHGRKFVQGKSI-------DVACHPGYALPKAQTTV-TCM 414
Query: 1133 SNPCLNGGICNDLINTFKCACPIG---FTGSHCQINIDDCVSSPCHNGGICKDSIAGYTC 1189
N C + K + I + S + + C G + D +
Sbjct: 415 ENGWSPTPRCIRVKTCSKSSIDIENGFISESQYTYALKEKAKYQCKLGYVTADGETSGSI 474
Query: 1190 ECLAGF-TGMSCETNINDCASNPCHRGECIDGENSF----TCACHPGFT 1233
C + D R + CH G+
Sbjct: 475 RCGKDGWSAQPTCIKSCDIPVFMNARTKNDFTWFKLNDTLDYECHDGYE 523
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate
IMMU system, blood, membrane, cytolysin, immune SYST;
HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB:
4a5w_B* 4e0s_B*
Length = 913
Score = 35.6 bits (81), Expect = 0.21
Identities = 61/439 (13%), Positives = 97/439 (22%), Gaps = 54/439 (12%)
Query: 1068 NTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMPGFTGTQCETD 1127
N P + + C+ PC N+G CVC G G CE
Sbjct: 475 NIPCAVTKRNNLRKALQEYAAKFDPCQCAPCPNNGRPTLSGTECLCVCQSGTYGENCEK- 533
Query: 1128 IDECASNPCLNGGICNDLINTFKCACPIGFTGSHC------QINIDDCVSSPCHNGGICK 1181
G + C + + Q C
Sbjct: 534 -QSPDYKSNAVDGQWGCWSSWSTCDATYKRSRTRECNNPAPQRGGKRCEGEKRQEEDCTF 592
Query: 1182 DSIAGYTCECLAGFTGMSCETNINDCASNPCHRGECIDGEN------------SFTCACH 1229
+ C+ M A + C + + +C
Sbjct: 593 SIMENNGQPCINDDEEMKEVDLPEIEADSGCPQPVPPENGFIRNEKQLYLVGEDVEISCL 652
Query: 1230 PGFT-----GALCNTQLDECASNP-CQFGGQCEDLINGYQCRCKPGTSGTNCEININECY 1283
GF C + CQ + ++ E C
Sbjct: 653 TGFETVGYQYFRCLPDGTWRQGDVECQRTECIKPVVQEVLTITPFQRLYRIGESIELTCP 712
Query: 1284 SNPCRNGAKCVDGINRYSCECLPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECP 1343
G +RY+C+ + + G +C C
Sbjct: 713 KGFVVAGP------SRYTCQGNSWTPPISNSLTCEKDTLTKLKGHCQLGQKQSGSECICM 766
Query: 1344 RGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQH 1403
D D C D + C+F ++C +N H
Sbjct: 767 SPEEDC-SHHSEDLCVFD----------------TDSNDYFTSPACKFLAEKCLNNQQLH 809
Query: 1404 GGICTDHLNGYTCECQIGYTGINCEINID-DCAFKPCRHGGTCIDLVNAYKCVCAKAGNH 1462
+G E + T ++ C + C C + KCVC
Sbjct: 810 FLHIGSCQDGRQLEWGLERTRLSSNSTKKESCGYDTCYDWEKCSASTS--KCVCLLPPQ- 866
Query: 1463 RCDDECNTIACHFDGNDCS 1481
C N + C G+ S
Sbjct: 867 -CFKGGNQLYCVKMGSSTS 884
Score = 35.2 bits (80), Expect = 0.26
Identities = 45/398 (11%), Positives = 89/398 (22%), Gaps = 21/398 (5%)
Query: 38 NSCDSFPCMNGGTCTLKSL-DRYTCTCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTY 96
C N + C CAP + L C++G + E
Sbjct: 476 IPCAVTKRNNLRKALQEYAAKFDPCQCAPCPNNGRPTLSGTECLCVCQSGTYGENCEKQS 535
Query: 97 ECDCAPGFVGQTCSEDIIECVDDPCVHGECFNTHGSYTFQMIFIFFTNQYSWFLIAGSPC 156
+ GQ D + + + S
Sbjct: 536 PDYKSNAVDGQWGCWSSWSTCDATYKRSRTRECNNPAPQRGGKRCEGEKRQEEDCTFSIM 595
Query: 157 EHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTF----RCVCM 212
E++G + + C +G ++ +
Sbjct: 596 ENNGQPCIN-----DDEEMKEVDLPEIEADSGCPQPVPPENGFIRNEKQLYLVGEDVEIS 650
Query: 213 CEPGYTGQNCESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNL 272
C G+ + D + Q C+ + + + I +
Sbjct: 651 CLTGFETVGYQYFRCLPDGTWRQGDVECQRTECIKPVVQEVLTITPFQRLYRIGESIELT 710
Query: 273 CQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVN 332
C G + G ++Y+C + ++ ++ H G CIC++
Sbjct: 711 CPKGFV-VAGPSRYTCQGNSWTPPISNSLTCEKDTLTKLKGHCQ--LGQKQSGSECICMS 767
Query: 333 GWTGP---DCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCH 389
L + D F C +C + H+
Sbjct: 768 PEEDCSHHSEDLCVFDTDSNDYFTSPACKFLAE----KCLNNQQLHFLHIGSCQDGRQLE 823
Query: 390 ADAICDTNPI-INGSYTCSCASGYKGVNCSEDINECEQ 426
+C + Y CS ++C
Sbjct: 824 WGLERTRLSSNSTKKESCGYDTCYDWEKCSASTSKCVC 861
Score = 32.9 bits (74), Expect = 1.2
Identities = 68/458 (14%), Positives = 104/458 (22%), Gaps = 61/458 (13%)
Query: 907 PCVPNRCQHGARCTPSANFQDFACHCGVGWTGRYCNEDVDECQLSSPCRNGATCHNTNGS 966
PC + + + + C C PC N +
Sbjct: 477 PCAVTKRNNLRKALQEYAAKFDPCQCA-------------------PCPNNGRPTLSGTE 517
Query: 967 YLCECAKGYEGRDCLINTDDCASFPCQNGGTCLDEVGDYSCL-CVDGFSGKHCEVDIDEC 1025
LC C G G +C G +C + C +
Sbjct: 518 CLCVCQSGTYGENC--EKQSPDYKSNAVDGQWGCWSSWSTCDATYKRSRTRECNNPAPQR 575
Query: 1026 SSNPCHNGATCNQFQMIFIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPR 1085
C + I N + E C Q
Sbjct: 576 GGKRCEGEKRQEEDCTFSIMENNGQPC----INDDEEMKEVDLPEIEADSGCPQPVPPEN 631
Query: 1086 CETNVNECESHPCQ------NDGSCLDDPGTFRCVCMPGFTGTQCETDIDECASNPCLNG 1139
+ + G FRC+ + E EC
Sbjct: 632 GFIRNEKQLYLVGEDVEISCLTGFETVGYQYFRCLPDGTWRQGDVECQRTECIKPVVQEV 691
Query: 1140 GICNDLINTFK------CACPIGFT-----GSHCQINIDDCVSSPCHNGGICKDSIAGYT 1188
++ CP GF CQ N S +
Sbjct: 692 LTITPFQRLYRIGESIELTCPKGFVVAGPSRYTCQGNSWTPPISNSLTCEKDTLTKLKGH 751
Query: 1189 CECLAGFTGMSCETNINDCASNPCHRGEC-IDGENSFT---CACHPGFTGALCNTQLDEC 1244
C+ +G C + + C D +++ AC L N QL
Sbjct: 752 CQLGQKQSGSECICMSPEEDCSHHSEDLCVFDTDSNDYFTSPACKFLAEKCLNNQQLHFL 811
Query: 1245 ASNPCQFGGQCEDLINGYQCRCKPGTSGTNCEININECYSNP----------CRNGAKCV 1294
CQ G Q E + + T +C + CY C +C
Sbjct: 812 HIGSCQDGRQLEWGLERTRL-SSNSTKKESC--GYDTCYDWEKCSASTSKCVCLLPPQCF 868
Query: 1295 DGINRYSCECLPGYTGLHCETNINECASNPCANGGVCV 1332
G N+ C + + NI E + CAN + +
Sbjct: 869 KGGNQLYCVKMGS-STSEKTLNICEVGTIRCANRKMEI 905
Score = 31.8 bits (71), Expect = 3.0
Identities = 62/426 (14%), Positives = 107/426 (25%), Gaps = 30/426 (7%)
Query: 1133 SNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGYTCECL 1192
+ ++ + D C +PC N G S C C
Sbjct: 464 FELAPIVDLVRNIPCAVTKRNNLRKALQEYAAKFDPCQCAPCPNNGRPTLSGTECLCVCQ 523
Query: 1193 AGFTGMSCETNINDCASNPCHRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFG 1252
+G G +CE D SN S A + CN + C+ G
Sbjct: 524 SGTYGENCEKQSPDYKSNAVDGQWGCWSSWSTCDATYKRSRTRECNNPAPQRGGKRCE-G 582
Query: 1253 GQCEDLINGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCECLPGYTGLH 1312
+ ++ + G N + + E + C + + L+
Sbjct: 583 EKRQEEDCTFSIMENNGQPCINDDEEMKEVDLPEIEADSGCPQPVP-PENGFIRNEKQLY 641
Query: 1313 CETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDP-CLNGGTCED 1371
E C G V GY RCL D D C +
Sbjct: 642 LV---GEDVEISCLTGFETV------------GYQYFRCLPDGTWRQGDVECQRTECIKP 686
Query: 1372 GLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINCEINI 1431
+ + + + + I E C G + + YTC+ I+ +
Sbjct: 687 VVQEVLTIT-----PFQRLYRIGESIELTCPKGFVVAGP-SRYTCQGNSWTPPISNSLTC 740
Query: 1432 DDCAFKPCRHGGTCIDLVNAYKCVCAKAGNHRCDDECNTIACHFDGNDCSLGINPWINCT 1491
+ + + +C+C + C FD + S C
Sbjct: 741 EKDTLTKLKGHCQLGQKQSGSECICMSP--EEDCSHHSEDLCVFDTD--SNDYFTSPACK 796
Query: 1492 AN-INCWEVF-MNGRCDEVCNNPQCLFDGRDCEKNLQPCNPIYDAYCQKHYANGHCDYSC 1549
C ++ C + + L G + + Y C S
Sbjct: 797 FLAEKCLNNQQLHFLHIGSCQDGRQLEWGLERTRLSSNSTKKESCGYDTCYDWEKCSAST 856
Query: 1550 NNAECN 1555
+ C
Sbjct: 857 SKCVCL 862
Score = 30.2 bits (67), Expect = 8.5
Identities = 58/399 (14%), Positives = 82/399 (20%), Gaps = 44/399 (11%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSCDSFPCMNGGTCTLKSLDRYT 60
CQ N + C C G CE + + G + S T
Sbjct: 500 CQCAPCPNNGRPTLSGTECLCVCQSGTYGENCEKQSPDYKSNAVDGQWGCWSSWSTCDAT 559
Query: 61 C---------TCAPGFTGSQCELQDHCASSPCRNGAVCTSLEDTYECDCAPGFVGQTCSE 111
AP G +CE + + + +
Sbjct: 560 YKRSRTRECNNPAPQRGGKRCEGEKRQEEDCTFSIMENNGQPCINDDEEMKEVDLPEIEA 619
Query: 112 DIIECVDDPCVHGECFNTHGSYTFQMIFIFFTNQ-YSWFLIAGSPCEHDGT-------CV 163
D P +G N Y + C DGT C
Sbjct: 620 DSGCPQPVPPENGFIRNEKQLYLVGEDVEISCLTGFETVGYQYFRCLPDGTWRQGDVECQ 679
Query: 164 NTPGSF-ACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYTGQNC 222
T T + + E C G + P + C +T
Sbjct: 680 RTECIKPVVQEVLTITPFQRLYRIGESIELTC-PKGFVVAGPSRYTCQ---GNSWTPPIS 735
Query: 223 ESKYVPCDPSPCQNGGVCRELDNLNYECECQSGYRGKNCEENIDDCPGNLCQNGATCMDG 282
S D G EC C S + D C + N
Sbjct: 736 NSLTCEKDTLTKLKGHCQLGQKQSGSECICMSPEED-CSHHSEDLCVFDTDSNDYFTSPA 794
Query: 283 INKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVNGWTGPDCSLN 342
+ CL C +G + S
Sbjct: 795 CKFLAEKCLNNQQLHFL---------HIGSCQDGRQLEWGLERTRL--------SSNSTK 837
Query: 343 IDDCAGAACFNGATCIDRVGSFYC----QCTPGKTGLLC 377
+ C C++ C C QC G L C
Sbjct: 838 KESCGYDTCYDWEKCSASTSKCVCLLPPQCFKGGNQLYC 876
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm,
hydrolase, metal-binding, metalloprotease,
polymorphism, protease, zinc; 2.30A {Homo sapiens} PDB:
1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Length = 50
Score = 31.3 bits (71), Expect = 0.22
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 45 CMNGGTCTLKSLDRYTCTCAPGFTGSQCELQDHCA 79
C +G L D+ C C G+ G++CE D A
Sbjct: 16 CFHGTCRFLVQEDKPACVCHSGYVGARCEHADLLA 50
Score = 28.6 bits (64), Expect = 2.3
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 532 HGTLDCVQLVNNYHCNCRPGYMGRHCEVKDL 562
HGT + + C C GY+G CE DL
Sbjct: 18 HGTCRFLVQEDKPACVCHSGYVGARCEHADL 48
Score = 26.7 bits (59), Expect = 8.8
Identities = 11/36 (30%), Positives = 13/36 (36%), Gaps = 7/36 (19%)
Query: 155 PCEHDGTCVN-------TPGSFACNCTQGFTGPRCE 183
P H C + AC C G+ G RCE
Sbjct: 9 PDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCE 44
Score = 26.7 bits (59), Expect = 8.8
Identities = 11/36 (30%), Positives = 13/36 (36%), Gaps = 7/36 (19%)
Query: 1059 PCEHDGTCVN-------TPGSFACNCTQGFTGPRCE 1087
P H C + AC C G+ G RCE
Sbjct: 9 PDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCE 44
Score = 26.7 bits (59), Expect = 9.7
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 1363 CLNGGTCE--DGLNQFICHCKPGYGGKRCEF 1391
C +G TC ++ C C GY G RCE
Sbjct: 16 CFHG-TCRFLVQEDKPACVCHSGYVGARCEH 45
>1szb_A Mannose binding lectin-associated serine protease-2 related
protein, MAP19 (19KDA)...; calcium, complement, innate
immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1
g.3.11.1
Length = 170
Score = 33.8 bits (77), Expect = 0.26
Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Query: 497 LVYRTERMVIDFGMKHIGSRCEGDINECLSNPCSSHGTL-DCVQLVNNYHCNCRPGYMGR 555
+ +R++ DI+EC P + C + ++C+CR GY+
Sbjct: 100 ITFRSDYSNEKPFTGFEAFYAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLH 159
Query: 556 HCEV 559
+
Sbjct: 160 RNKR 163
Score = 33.0 bits (75), Expect = 0.52
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 933 GVGWTGRYCNEDVDECQLSSPCRNGA--TCHNTNGSYLCECAKGYEGRDCLIN 983
G+ Y ED+DECQ++ CHN G + C C GY
Sbjct: 112 FTGFEAFYAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRT 164
Score = 32.6 bits (74), Expect = 0.74
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Query: 1382 PGYGGKRCEFDIDECGSNPCQ---HGGICTDHLNGYTCECQIGYTGINCEINIDD 1433
G+ DIDEC P + C +HL G+ C C+ GY + +
Sbjct: 113 TGFEAFYAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 167
Score = 31.4 bits (71), Expect = 1.5
Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Query: 1117 PGFTGTQCETDIDECASNPCLNGG---ICNDLINTFKCACPIGFTGSHCQINIDD 1168
GF DIDEC P C++ + F C+C G+ + +
Sbjct: 113 TGFEAFYAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 167
Score = 31.4 bits (71), Expect = 1.7
Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Query: 1079 QGFTGPRCETNVNECESHPCQN---DGSCLDDPGTFRCVCMPGFTGTQCETDIDE 1130
GF +++EC+ P + D C + G F C C G+ + + E
Sbjct: 113 TGFEAFYAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 167
Score = 31.1 bits (70), Expect = 2.0
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 1156 GFTGSHCQINIDDCVSSPCHNGG---ICKDSIAGYTCECLAGFTGMSCETNIND 1206
GF + +ID+C +P C + + G+ C C AG+ + ++
Sbjct: 114 GFEAFYAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 167
Score = 30.3 bits (68), Expect = 4.1
Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 3/56 (5%)
Query: 1229 HPGFTGALCNTQLDECASNPCQFGGQ---CEDLINGYQCRCKPGTSGTNCEININE 1281
GF +DEC P + C + + G+ C C+ G + +E
Sbjct: 112 FTGFEAFYAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 167
Score = 29.5 bits (66), Expect = 6.9
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Query: 299 CEQDVDECSIRPSVCHNGA-TCTNSVGGFSCICVNGWTGPDCSLNIDD 345
+D+DEC + P C N +GGF C C G+ +
Sbjct: 120 AAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 167
Score = 29.5 bits (66), Expect = 6.9
Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 3/55 (5%)
Query: 1268 PGTSGTNCEININECYSNPCRNGAK---CVDGINRYSCECLPGYTGLHCETNINE 1319
G +I+EC P C + + + C C GY + +E
Sbjct: 113 TGFEAFYAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 167
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR
{Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Length = 50
Score = 30.5 bits (69), Expect = 0.37
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 45 CMNGGTCTLKSLDRYTCTCAPGFTGSQCELQD 76
C+ G + + +C C G+ G++CE D
Sbjct: 16 CIKGRCRFVVAEQTPSCVCDEGYIGARCERVD 47
Score = 27.8 bits (62), Expect = 4.1
Identities = 11/31 (35%), Positives = 12/31 (38%)
Query: 532 HGTLDCVQLVNNYHCNCRPGYMGRHCEVKDL 562
G V C C GY+G CE DL
Sbjct: 18 KGRCRFVVAEQTPSCVCDEGYIGARCERVDL 48
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion,
cytoplasmic vesicl lectin, virulence, EGF-like domain,
membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Length = 61
Score = 30.9 bits (69), Expect = 0.43
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 1358 CASDPC--LNGGTCEDGLNQFICHCKPGY 1384
C+S+PC GTC++ + +IC C GY
Sbjct: 14 CSSNPCGPEAAGTCKETNSGYICRCNQGY 42
Score = 29.8 bits (66), Expect = 1.1
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 1244 CASNPC--QFGGQCEDLINGYQCRCKPG 1269
C+SNPC + G C++ +GY CRC G
Sbjct: 14 CSSNPCGPEAAGTCKETNSGYICRCNQG 41
Score = 27.5 bits (60), Expect = 8.2
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 1396 CGSNPC--QHGGICTDHLNGYTCECQIGY 1422
C SNPC + G C + +GY C C GY
Sbjct: 14 CSSNPCGPEAAGTCKETNSGYICRCNQGY 42
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET:
NAG; 2.85A {Rattus norvegicus}
Length = 349
Score = 34.1 bits (77), Expect = 0.46
Identities = 16/83 (19%), Positives = 23/83 (27%), Gaps = 6/83 (7%)
Query: 945 VDECQLSSPCRNGATCHNTNGSYLCECAKGYE----GRDCLINTDDCASFPCQNGGTCLD 1000
V+EC C G C N+ G++ C C GYE R C +
Sbjct: 1 VNECAEEGYCSQG--CTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQV 58
Query: 1001 EVGDYSCLCVDGFSGKHCEVDID 1023
+ +D
Sbjct: 59 LPHRSEYTLLLNNLENAIALDFH 81
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR
{Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Length = 46
Score = 29.8 bits (67), Expect = 0.64
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 45 CMNGGTCTLKSLDRYTCTCAPGFTGSQCE 73
C++G L + + C C G+TG +CE
Sbjct: 14 CLHGQCIYLVDMSQNYCRCEVGYTGVRCE 42
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta
propeller, protein binding-antagonist complex; HET: NAG
FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Length = 318
Score = 33.5 bits (76), Expect = 0.69
Identities = 19/123 (15%), Positives = 36/123 (29%), Gaps = 9/123 (7%)
Query: 111 EDIIECVD-DPCVHGECFNTHGSYTFQMI----FIFFTNQYSWFLIAGSPCEHDGTCVNT 165
+ I + D + F + +++T+ + ++A + +G
Sbjct: 187 LNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH 246
Query: 166 PGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCVCMCEPGYT----GQN 221
F+ F+ R N C CL P C C G G+
Sbjct: 247 SDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKT 306
Query: 222 CES 224
C+
Sbjct: 307 CKD 309
Score = 33.1 bits (75), Expect = 0.86
Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 7/96 (7%)
Query: 1043 FIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDG 1102
+++T+ + ++A + +G F+ F+ R N C
Sbjct: 220 ILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSH 279
Query: 1103 SCLDDP--GTFRCVCMPGFT----GTQCETDIDECA 1132
CL P ++C C G G C+ D +
Sbjct: 280 LCLMSPVKPFYQCACPTGVKLLENGKTCK-DGNSHH 314
Score = 31.2 bits (70), Expect = 3.0
Identities = 10/53 (18%), Positives = 14/53 (26%), Gaps = 7/53 (13%)
Query: 901 CHQKLDPCVPNRCQHGARCTPSANFQDFACHCGVGWT----GRYCNEDVDECQ 949
C H C S + C C G G+ C +D +
Sbjct: 265 NATNPCGIDNGGCSH--LCLMSPVKPFYQCACPTGVKLLENGKTC-KDGNSHH 314
Score = 30.4 bits (68), Expect = 5.7
Identities = 11/50 (22%), Positives = 16/50 (32%), Gaps = 7/50 (14%)
Query: 987 CASFPCQNGGTCLDEVGDYSCLCVDGFS----GKHCEVDIDECSSNPCHN 1032
+ C + Y C C G GK C+ D S + H+
Sbjct: 272 IDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCK---DGNSHHHHHH 318
Score = 29.7 bits (66), Expect = 9.3
Identities = 8/45 (17%), Positives = 14/45 (31%), Gaps = 5/45 (11%)
Query: 1396 CGSNPCQHGGICTDHLNGYTCECQIGYT----GINCEINIDDCAF 1436
+ C H + + Y C C G G C+ + +
Sbjct: 272 IDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCK-DGNSHHH 315
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein;
signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG;
1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Length = 628
Score = 33.6 bits (76), Expect = 0.72
Identities = 13/98 (13%), Positives = 19/98 (19%), Gaps = 10/98 (10%)
Query: 586 NWSTTTTATAALATWNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRS 645
+ + G EY + C + C
Sbjct: 536 DKQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNLQEYRQHPCAQDNGGCSHICLV 595
Query: 646 KEGGGYRCDCPPGAT----GTHCELDSRNECYSNPCQH 679
K G RC CP C + + H
Sbjct: 596 KGDGTTRCSCPMHLVLLQDELSCG---GTKHH---HHH 627
Score = 30.2 bits (67), Expect = 7.9
Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 5/112 (4%)
Query: 600 WNGGVCTALDGGHTCICPDNYSGRNCEYFGYDCDSNPCQNGGFCRSKEGGGYRCDCPPGA 659
+G T + G + + + +C S+ C + GG+ C CP
Sbjct: 236 TSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHY 295
Query: 660 TGTHCELDSRNECYSNPCQHAGTCEDRI----ADYACYCLPMWNGKNCDLYD 707
+ + + +R+ LP+ + +N D
Sbjct: 296 SLNADNRTCSA-PTTFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAID 346
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like
domain, repeat; HET: ABA; NMR {Mus musculus} SCOP:
g.3.11.1
Length = 45
Score = 29.7 bits (66), Expect = 0.75
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 45 CMNGGTCT-LKSLDRYTCTCAPGFTGSQCELQD 76
C+NGG ++SLD YTC C G++G +C+ +D
Sbjct: 11 CLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRD 43
Score = 28.9 bits (64), Expect = 1.4
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 1363 CLNGGTCE--DGLNQFICHCKPGYGGKRCEFD 1392
CLNGG + L+ + C+C GY G RC+
Sbjct: 11 CLNGGVXMHIESLDSYTCNCVIGYSGDRCQTR 42
Score = 28.9 bits (64), Expect = 1.5
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 228 PCDPSPCQNGGVCRELDNLN-YECECQSGYRGKNCE 262
C NGGV +++L+ Y C C GY G C+
Sbjct: 5 SSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQ 40
Score = 28.9 bits (64), Expect = 1.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 524 CLSNPCSSHGTLDCVQLVNNYHCNCRPGYMGRHCEVKDL 562
C + G ++ +++Y CNC GY G C+ +DL
Sbjct: 6 SYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRDL 44
Score = 28.5 bits (63), Expect = 2.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 8/39 (20%)
Query: 153 GSPCEHDGTCVN--------TPGSFACNCTQGFTGPRCE 183
G P +DG C+N + S+ CNC G++G RC+
Sbjct: 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQ 40
Score = 28.5 bits (63), Expect = 2.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 8/39 (20%)
Query: 1057 GSPCEHDGTCVN--------TPGSFACNCTQGFTGPRCE 1087
G P +DG C+N + S+ CNC G++G RC+
Sbjct: 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQ 40
Score = 28.1 bits (62), Expect = 3.0
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 1136 CLNGGICN--DLINTFKCACPIGFTGSHCQ 1163
CLNGG+ + ++++ C C IG++G CQ
Sbjct: 11 CLNGGVXMHIESLDSYTCNCVIGYSGDRCQ 40
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen,
glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A
{Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Length = 105
Score = 30.8 bits (69), Expect = 1.2
Identities = 14/76 (18%), Positives = 17/76 (22%), Gaps = 4/76 (5%)
Query: 266 DDCPGNLCQNGATCM-DGINKYSCLCLATYTGD--LCEQDVDECSIRPSVCHNGATCT-N 321
C A C CL + C C C A CT +
Sbjct: 11 HKCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPASITCEENNGGCAPEAECTMD 70
Query: 322 SVGGFSCICVNGWTGP 337
C C + P
Sbjct: 71 DKKEVECKCTKEGSEP 86
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty
acid synthase, acyl-carrier-protein, beta-ketoacyl RED
beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces
cerevisiae}
Length = 1688
Score = 32.9 bits (75), Expect = 1.3
Identities = 12/72 (16%), Positives = 16/72 (22%), Gaps = 35/72 (48%)
Query: 1665 GAC----HNNGTCVDK----------VGGFECRCPPGFVGSRWTDAECFSNANEAADFLA 1710
GAC + V+ VGG++ G F
Sbjct: 1104 GACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFE--------F----------- 1144
Query: 1711 ASAAAHALSTTF 1722
A S T
Sbjct: 1145 --GNMKATSNTL 1154
>1ob1_C Major merozoite surface protein; immune system,
immunoglobulin/complex, immunoglobulin, antib fragment,
MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum}
SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Length = 99
Score = 30.5 bits (68), Expect = 1.5
Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 12/85 (14%)
Query: 1164 INIDDCVSSPCHNGGICKDSIAG-YTCECLAGFTG----------MSCETNINDCASN-P 1211
I+ CV C C + C+CL + +C N C ++
Sbjct: 2 ISQHQCVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAK 61
Query: 1212 CHRGECIDGENSFTCACHPGFTGAL 1236
C + TC C + L
Sbjct: 62 CTEEDSGSNGKKITCECTKPDSYPL 86
Score = 28.2 bits (62), Expect = 9.5
Identities = 15/89 (16%), Positives = 22/89 (24%), Gaps = 9/89 (10%)
Query: 380 EDACTSNPCHADAICDTNPIINGSYTCSCASGYKGVN--CSEDINECEQGINCEINIDDC 437
+ C C ++ C ++ C C YK C E+ C N C
Sbjct: 4 QHQCVKKQCPQNSGC--FRHLDEREECKCLLNYKQEGDKCVEN-----PNPTCNENNGGC 56
Query: 438 AFKPCRHGGTCIDLVNAYKCVCQVPYTGH 466
C C P +
Sbjct: 57 DADAKCTEEDSGSNGKKITCECTKPDSYP 85
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid
transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Length = 316
Score = 31.9 bits (72), Expect = 1.8
Identities = 18/97 (18%), Positives = 27/97 (27%), Gaps = 13/97 (13%)
Query: 1043 FIFFTNQYSWFLIAGSPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDG 1102
+F+T+ + + + + + + F VN CE N G
Sbjct: 220 KVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNWCERTTLSNGG 279
Query: 1103 ---SCLDDP------GTFRCVCMPGFT----GTQCET 1126
CL P F C C G C T
Sbjct: 280 CQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCLT 316
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex
(toxin-growth factor), diphtheria toxin, receptor, H
binding epidermal growth factor; 2.65A {Homo sapiens}
SCOP: g.3.11.1
Length = 79
Score = 29.7 bits (66), Expect = 1.9
Identities = 13/48 (27%), Positives = 17/48 (35%), Gaps = 7/48 (14%)
Query: 518 EGDINECLSNPCSS-------HGTLDCVQLVNNYHCNCRPGYMGRHCE 558
+G +PC HG V+ + C C PGY G C
Sbjct: 29 KGKGLGKKRDPCLRKYKDFCIHGECKYVKELRAPSCICHPGYHGERCH 76
Score = 29.7 bits (66), Expect = 1.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 45 CMNGGTCTLKSLDRYTCTCAPGFTGSQCE 73
C++G +K L +C C PG+ G +C
Sbjct: 48 CIHGECKYVKELRAPSCICHPGYHGERCH 76
Score = 29.3 bits (65), Expect = 2.2
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Query: 1363 CLNGGTCE--DGLNQFICHCKPGYGGKRCE 1390
C++G C+ L C C PGY G+RC
Sbjct: 48 CIHG-ECKYVKELRAPSCICHPGYHGERCH 76
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers,
NAD binding DOMA amino acid insertional region,
hydrolase; HET: ADN NAD; 1.60A {Mycobacterium
tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Length = 494
Score = 32.1 bits (73), Expect = 2.3
Identities = 10/45 (22%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Query: 1692 RWTDAECFSNANEAADFLAASAAAHALSTT-FPIYRVRGVSSAEY 1735
RW FS + AA + P++ +G + EY
Sbjct: 88 RWASCNIFSTQDHAAAAVVVGPHGTPDEPKGVPVFAWKGETLEEY 132
>2uvo_A Agglutinin isolectin 1; carbohydrate-binding protein, hevein
domain, chitin-binding, GERM agglutinin, chitin-binding
protein; HET: NDG NAG GOL; 1.40A {Triticum aestivum}
PDB: 1wgc_A* 2cwg_A* 2uwg_A* 2x3t_A* 4aml_A* 7wga_A
9wga_A 2wgc_A 1wgt_A 1k7t_A* 1k7v_A* 1k7u_A 2uwz_A*
2x52_A* 1t0w_A*
Length = 171
Score = 30.8 bits (69), Expect = 2.9
Identities = 37/164 (22%), Positives = 48/164 (29%), Gaps = 14/164 (8%)
Query: 266 DDCPGNLCQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSV-- 323
+ C N C C Y G C+ S R GATCTN+
Sbjct: 5 EQGSNMECPNNLCC---SQYGYCGMGGDYCGKGCQNGACWTSKRCGSQAGGATCTNNQCC 61
Query: 324 ------GGFSCICVNGWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLC 377
G + C G G C +I + A + +C G C
Sbjct: 62 SQYGYCGFGAEYCGAGCQGGPCRADIKCGSQAGGKLCPNNLCCSQWGFCGLGSEFCGGGC 121
Query: 378 HLEDACTSNPCHADA---ICDTNPIINGSYTCSCASGYKGVNCS 418
T PC DA +C N + +C GY G C
Sbjct: 122 QSGACSTDKPCGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQ 165
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC
BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB:
2hor_A* 1lk9_A*
Length = 427
Score = 31.4 bits (71), Expect = 3.0
Identities = 12/51 (23%), Positives = 17/51 (33%)
Query: 1797 LENTERNGSYLCECAKGYEGRDCLINTDDCASYLINADADINVPDNSGKTA 1847
L+ GS CEC Y G DC C++ + + D
Sbjct: 28 LDGIISEGSPKCECNTCYTGPDCSEKIQGCSADVASGDGLFLEEYWKQHKE 78
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell
adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B*
1yuk_A* 2p28_A*
Length = 280
Score = 31.0 bits (69), Expect = 3.2
Identities = 21/85 (24%), Positives = 26/85 (30%), Gaps = 21/85 (24%)
Query: 154 SPCEHDGTCVNTPGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRC---- 209
S C G C C G+ G CE S + +GSC D + C
Sbjct: 196 SLCHGKGFLECG----ICRCDTGYIGKNCECQTQGRSS--QELEGSCRKDNNSIICSGLG 249
Query: 210 -----VCMCEPG------YTGQNCE 223
C+C GQ CE
Sbjct: 250 DCVCGQCLCHTSDVPGKLIYGQYCE 274
Score = 30.2 bits (67), Expect = 6.2
Identities = 19/66 (28%), Positives = 21/66 (31%), Gaps = 6/66 (9%)
Query: 1351 CLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQHGGICTDH 1410
C C G E G IC C GY GK CE G + + G C
Sbjct: 186 CRCRDQSRDRSLCHGKGFLECG----ICRCDTGYIGKNCEC--QTQGRSSQELEGSCRKD 239
Query: 1411 LNGYTC 1416
N C
Sbjct: 240 NNSIIC 245
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity,
modular structure, serine protease; HET: NAG FUC MAN;
2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Length = 399
Score = 31.3 bits (71), Expect = 3.4
Identities = 25/153 (16%), Positives = 37/153 (24%), Gaps = 28/153 (18%)
Query: 273 CQNGATCMDGINKYSCLCLATYTGDLCEQDVDECSIRPSVCHNGATCTNSVGGFSCICVN 332
Q D + C Y L E + S VC + T ++ C
Sbjct: 18 LQPQYQFRD---YFIATCKQGY--QLIEGNQVLHSFTA-VCQDDGTWHRAMP--RCKIK- 68
Query: 333 GWTGPDCSLNIDDCAGAACFNGATCIDRVGSFYCQCTPGKTGLLCHLEDACTSNPCHADA 392
DC + G + T G ++ C
Sbjct: 69 -----DCGQPRNLPNGDFRY--------------TTTMGVNTYKARIQYYCHEPYYKMQT 109
Query: 393 ICDTNPIINGSYTCSCASGYKGVNCSEDINECE 425
+ G YTC+ +K E I C
Sbjct: 110 RAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCL 142
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond,
EGF- like domain, glycoprotein, polymorphism, structural
genomics, PSI-2; NMR {Homo sapiens}
Length = 71
Score = 28.5 bits (63), Expect = 3.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 302 DVDECSIRPSVCHNGATCTNSVGGFSCI 329
DV+EC P C C N GG+ C+
Sbjct: 2 DVNECLTIPEACKGEMKCINHYGGYLCL 29
Score = 27.7 bits (61), Expect = 6.9
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 944 DVDECQ-LSSPCRNGATCHNTNGSYLC 969
DV+EC + C+ C N G YLC
Sbjct: 2 DVNECLTIPEACKGEMKCINHYGGYLC 28
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain,
kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP:
g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Length = 145
Score = 29.9 bits (66), Expect = 4.3
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 632 CDSNPCQNGGFCRSKEG--GGYRCDCPPGATGTHCELDSRNECYSNPCQH 679
+ C NGG C S + + C+CP G HCE+D CY
Sbjct: 10 PSNCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEGNGHF 59
>2hvm_A Hevamine; hydrolase, chitinase/lysozyme; 1.80A {Hevea brasiliensis}
SCOP: c.1.8.5 PDB: 1hvq_A* 1llo_A 1kr0_A* 1kr1_A* 1kqy_A*
1kqz_A*
Length = 273
Score = 30.5 bits (68), Expect = 5.0
Identities = 13/50 (26%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Query: 1512 PQCLFDGRDCEKNLQPCNPIYDAYCQKHYANGHCDYSCNNAECNWDGLDC 1561
PQC F R L ++D + Y N C YS N + +
Sbjct: 157 PQCPFPDRYLGTALN--TGLFDYVWVQFYNNPPCQYSSGNINNIINSWNR 204
>1m6b_A C-ER, receptor protein-tyrosine kinase ERBB-3; cell surface receptor,
immunity, signaling transferase; HET: NAG NDG; 2.60A
{Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1
PDB: 3p11_A*
Length = 621
Score = 30.8 bits (68), Expect = 5.1
Identities = 40/325 (12%), Positives = 72/325 (22%), Gaps = 11/325 (3%)
Query: 1070 PGSFACNCTQGFTGPRCETNVNECESHPCQNDGSCLDD--PGTFRCVCMPGFTGTQCETD 1127
+F V C + + SC+ P G +
Sbjct: 248 KLTFQLEPNPHTKYQYGGVCVASCPHNFVVDQTSCVRACPPDKMEV----DKNGLKMCEP 303
Query: 1128 IDECASNPCLNGGICNDLINTFKCACPIGFTGSHCQINIDDCVSSPCHNGGICKDSIAGY 1187
C G + + N+D ++ + ++
Sbjct: 304 CGGLCPKACEGTGSGSRFQTVDSSNIDGFVNCTKILGNLDFLITGLNGDPWHKIPALDPE 363
Query: 1188 TCECLAGFTGMSCETNINDCASNPCHRGECIDGENSFTCACHPGFTGALC--NTQLDECA 1245
++ NI + + + + + L N +
Sbjct: 364 KLNVFRTVREITGYLNIQSWPPHMHNFSVFSNLTTIGGRSLYNRGFSLLIMKNLNVTSLG 423
Query: 1246 SNPCQFGGQCEDLI-NGYQCRCKPGTSGTNCEININECYSNPCRNGAKCVDGINRYSCEC 1304
+ I Q + T E + N + C+
Sbjct: 424 FRSLKEISAGRIYISANRQLCYHHSLNWTKVLRGPTEERLDIKHNRPRRDCVAEGKVCDP 483
Query: 1305 LPGYTGLHCETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCL 1364
L G + + GGVCV + E ++A C S EC P
Sbjct: 484 LCSSGGCWGPGPGQCLSCRNYSRGGVCVTHCNFLNGEPREFAHEAECFSCHPEC--QPME 541
Query: 1365 NGGTCEDGLNQFICHCKPGYGGKRC 1389
TC + C G C
Sbjct: 542 GTATCNGSGSDTCAQCAHFRDGPHC 566
>1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED
protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5
Length = 299
Score = 30.5 bits (68), Expect = 5.2
Identities = 10/50 (20%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Query: 1512 PQCLFDGRDCEKNLQPCNPIYDAYCQKHYANGHCDYSCNNAECNWDGLDC 1561
P CL + +Q +D + Y + C YS N + +
Sbjct: 163 PGCLSPDEYLDNAIQ--TRHFDYIFVRFYNDRSCQYSTGNIQRIRNAWLS 210
>3i2t_A Epidermal growth factor receptor, isoform A; EGFR, ectodomain,
unliganded, autoinhibited, ATP nucleotide-binding,
tyrosine-protein kinase; HET: NDG NAG BMA; 2.70A
{Drosophila melanogaster} PDB: 3ltf_A* 3ltg_A
Length = 551
Score = 30.4 bits (67), Expect = 6.7
Identities = 39/371 (10%), Positives = 73/371 (19%), Gaps = 27/371 (7%)
Query: 1204 INDCASNPCHRGECIDGENSFTCACHPGFTGALCNTQLDECASNPCQFGGQCEDLINGYQ 1263
D + +C + P + +G + + + +
Sbjct: 155 NYDFTAPERECPKCHESCTHGCWGEGPKNCQKFSKLTCSPQCAGGRCYGPKPRECCHLFC 214
Query: 1264 CRCKPGTSGTNCEININECYSNPCRNG--AKCVDGINRYSCECLPGYTGLHCETNINECA 1321
G + +C N C+ Y E P + T + EC
Sbjct: 215 AGGCTGPTQKDCIACKNFFDEGVCKEECPPMRKYNPTTYVLETNPEGKYAYGATCVKECP 274
Query: 1322 SNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPCLNGGTCEDGLNQFICHCK 1381
+ + G C CP+ D G T N
Sbjct: 275 GHLLRDNGAC-------VRSCPQDKMDKGGECVPCNGPCPKTCPGVTVLHAGNIDSFRNC 327
Query: 1382 PGYGGKRCEFDIDECGSNPCQHGGICTDHLNGYTCECQIGYTGINC----------EINI 1431
G D G E ++ +
Sbjct: 328 TVIDGNIRILDQTFSGFQDVYANYTMGPRYIPLDPERLEVFSTVKEITGYLNIEGTHPQF 387
Query: 1432 DDCAFKPCRHGGTCIDLVNAYKCVCAKAGNHRCDDECNTIACHFDGN--------DCSLG 1483
+ ++ L+ + A + E + G+ C +
Sbjct: 388 RNLSYFRNLETIHGRQLMESMFAALAIVKSSLYSLEMRNLKQISSGSVVIQHNRDLCYVS 447
Query: 1484 INPWINCTANINCWEVFMNGRCDEVCNNPQCLFDGRDCEKNLQPCNPIYDAYCQKHYANG 1543
W ++C + + E C+ NG
Sbjct: 448 NIRWPAIQKEPEQKVWVNENLRADLCEKNGTICSDQCNEDGCWGAGTDQCLNCKNFNFNG 507
Query: 1544 HCDYSCNNAEC 1554
C C
Sbjct: 508 TCIADCGYISN 518
>4deq_A Neuropilin-1, vascular endothelial growth factor; coagulation factor
domain, heparin binding domain, angiogene protein
binding-cytokine complex; 2.65A {Homo sapiens} PDB:
1kmx_A 1vgh_A 2vgh_A
Length = 218
Score = 29.6 bits (66), Expect = 7.6
Identities = 8/52 (15%), Positives = 11/52 (21%)
Query: 1351 CLSDVDECASDPCLNGGTCEDGLNQFICHCKPGYGGKRCEFDIDECGSNPCQ 1402
PC + C C RC+ E C+
Sbjct: 161 VDGSGSGSPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELNERTCR 212
Score = 29.6 bits (66), Expect = 8.3
Identities = 10/51 (19%), Positives = 19/51 (37%)
Query: 1313 CETNINECASNPCANGGVCVDLIDGFKCECPRGYYDARCLSDVDECASDPC 1363
+ + + PC+ + + D C+C D+RC + E C
Sbjct: 161 VDGSGSGSPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELNERTC 211
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease,
hydrolase, polymorphism, glycoprotein,
gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo
sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L*
2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L*
2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L*
2y5h_L* ...
Length = 55
Score = 27.0 bits (60), Expect = 8.3
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 8/38 (21%)
Query: 959 TCHNTNGSYLCECAKGYE----GRDCLINTDDCASFPC 992
CH S +C CA+GY G+ C +PC
Sbjct: 14 FCHEEQNSVVCSCARGYTLADNGKAC----IPTGPYPC 47
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615
antibody, FAB, ternary complex, immune SY hydrolase;
HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP:
g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A*
3laq_A* 1kdu_A
Length = 122
Score = 28.6 bits (63), Expect = 9.0
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 1 CQNGGTCNVRQSPSYSPSFWCSCPIGFSASLCEIPVANSC 40
C NGGTC + +S WC+CP F CEI + +C
Sbjct: 3 CLNGGTC--VSNKYFSNIHWCNCPKKFGGQHCEIDKSKTC 40
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.139 0.489
Gapped
Lambda K H
0.267 0.0564 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 31,180,758
Number of extensions: 2045221
Number of successful extensions: 16834
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8297
Number of HSP's successfully gapped: 3423
Length of query: 1945
Length of database: 6,701,793
Length adjustment: 108
Effective length of query: 1837
Effective length of database: 3,686,325
Effective search space: 6771779025
Effective search space used: 6771779025
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.2 bits)